locus-tag class description QMA0440_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix QMA0440_RS00005 PF00308 Bacterial dnaA protein QMA0440_RS00005 PF11638 DnaA N-terminal domain QMA0440_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain QMA0440_RS00010 PF02767 DNA polymerase III beta subunit, central domain QMA0440_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain QMA0440_RS00015 PF02463 RecF/RecN/SMC N terminal domain QMA0440_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase QMA0440_RS00020 PF01751 Toprim domain QMA0440_RS00020 PF18053 DNA gyrase B subunit insert domain QMA0440_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus QMA0440_RS00020 PF00204 DNA gyrase B QMA0440_RS00030 PF12566 Protein of unknown function (DUF3748) QMA0440_RS00030 PF07676 WD40-like Beta Propeller Repeat QMA0440_RS00035 PF07119 Protein of unknown function (DUF1375) QMA0440_RS00040 PF00011 Hsp20/alpha crystallin family QMA0440_RS00045 PF00011 Hsp20/alpha crystallin family QMA0440_RS00050 PF06826 Predicted Permease Membrane Region QMA0440_RS00050 PF02080 TrkA-C domain QMA0440_RS00055 PF00155 Aminotransferase class I and II QMA0440_RS00060 PF00691 OmpA family QMA0440_RS00060 PF13488 Glycine zipper QMA0440_RS00080 PF03352 Methyladenine glycosylase QMA0440_RS00090 PF02091 Glycyl-tRNA synthetase alpha subunit QMA0440_RS00095 PF02092 Glycyl-tRNA synthetase beta subunit QMA0440_RS00095 PF05746 DALR anticodon binding domain QMA0440_RS00100 PF11254 Protein of unknown function (DUF3053) QMA0440_RS00130 PF02378 Phosphotransferase system, EIIC QMA0440_RS00130 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 QMA0440_RS00130 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit QMA0440_RS00135 PF08125 Mannitol dehydrogenase C-terminal domain QMA0440_RS00135 PF01232 Mannitol dehydrogenase Rossmann domain QMA0440_RS00140 PF05068 Mannitol repressor QMA0440_RS00145 PF10928 Protein of unknown function (DUF2810) QMA0440_RS00150 PF03473 MOSC domain QMA0440_RS00150 PF03475 3-alpha domain QMA0440_RS00155 PF00672 HAMP domain QMA0440_RS00155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain QMA0440_RS00155 PF02203 Tar ligand binding domain homologue QMA0440_RS00160 PF02777 Iron/manganese superoxide dismutases, C-terminal domain QMA0440_RS00160 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain QMA0440_RS00165 PF02634 FdhD/NarQ family QMA0440_RS00170 PF01568 Molydopterin dinucleotide binding domain QMA0440_RS00170 PF00384 Molybdopterin oxidoreductase QMA0440_RS00170 PF04879 Molybdopterin oxidoreductase Fe4S4 domain QMA0440_RS00175 PF04879 Molybdopterin oxidoreductase Fe4S4 domain QMA0440_RS00175 PF00384 Molybdopterin oxidoreductase QMA0440_RS00175 PF01568 Molydopterin dinucleotide binding domain QMA0440_RS00180 PF13247 4Fe-4S dicluster domain QMA0440_RS00180 PF09163 Formate dehydrogenase N, transmembrane QMA0440_RS00185 PF01292 Prokaryotic cytochrome b561 QMA0440_RS00190 PF04216 Protein involved in formate dehydrogenase formation QMA0440_RS00195 PF03841 L-seryl-tRNA selenium transferase QMA0440_RS00195 PF12390 Selenocysteine synthase N terminal QMA0440_RS00200 PF09106 Elongation factor SelB, winged helix QMA0440_RS00200 PF03144 Elongation factor Tu domain 2 QMA0440_RS00200 PF00009 Elongation factor Tu GTP binding domain QMA0440_RS00200 PF09107 Elongation factor SelB, winged helix QMA0440_RS00205 PF01427 D-ala-D-ala dipeptidase QMA0440_RS00210 PF07690 Major Facilitator Superfamily QMA0440_RS00215 PF01757 Acyltransferase family QMA0440_RS00220 PF13356 Arm DNA-binding domain QMA0440_RS00220 PF00589 Phage integrase family QMA0440_RS00245 PF01175 Urocanase Rossmann-like domain QMA0440_RS00245 PF17391 Urocanase N-terminal domain QMA0440_RS00245 PF17392 Urocanase C-terminal domain QMA0440_RS00250 PF00221 Aromatic amino acid lyase QMA0440_RS00255 PF00324 Amino acid permease QMA0440_RS00265 PF12146 Serine aminopeptidase, S33 QMA0440_RS00270 PF00884 Sulfatase QMA0440_RS00270 PF08019 Phosphoethanolamine transferase EptA/EptB QMA0440_RS00275 PF00072 Response regulator receiver domain QMA0440_RS00275 PF00196 Bacterial regulatory proteins, luxR family QMA0440_RS00280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase QMA0440_RS00280 PF07730 Histidine kinase QMA0440_RS00280 PF05231 MASE1 QMA0440_RS00285 PF07690 Major Facilitator Superfamily QMA0440_RS00295 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle QMA0440_RS00300 PF00528 Binding-protein-dependent transport system inner membrane component QMA0440_RS00305 PF00528 Binding-protein-dependent transport system inner membrane component QMA0440_RS00305 PF12911 N-terminal TM domain of oligopeptide transport permease C QMA0440_RS00310 PF00005 ABC transporter QMA0440_RS00310 PF08352 Oligopeptide/dipeptide transporter, C-terminal region QMA0440_RS00315 PF08352 Oligopeptide/dipeptide transporter, C-terminal region QMA0440_RS00315 PF00005 ABC transporter QMA0440_RS00320 PF11658 Cellulose biosynthesis protein BcsG QMA0440_RS00325 PF11120 Cellulose biosynthesis protein BcsF QMA0440_RS00330 PF10995 Cellulose biosynthesis GIL QMA0440_RS00340 PF06564 Cellulose biosynthesis protein BcsQ QMA0440_RS00345 PF03552 Cellulose synthase QMA0440_RS00345 PF00535 Glycosyl transferase family 2 QMA0440_RS00345 PF07238 PilZ domain QMA0440_RS00350 PF03170 Bacterial cellulose synthase subunit QMA0440_RS00355 PF01270 Glycosyl hydrolases family 8 QMA0440_RS00360 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) QMA0440_RS00365 PF17154 Gammaproteobacterial periplasmic sensor domain QMA0440_RS00365 PF00672 HAMP domain QMA0440_RS00365 PF00990 Diguanylate cyclase, GGDEF domain QMA0440_RS00365 PF00563 EAL domain QMA0440_RS00370 PF00375 Sodium:dicarboxylate symporter family QMA0440_RS00375 PF00675 Insulinase (Peptidase family M16) QMA0440_RS00375 PF05193 Peptidase M16 inactive domain QMA0440_RS00380 PF00294 pfkB family carbohydrate kinase QMA0440_RS00385 PF01361 Tautomerase enzyme QMA0440_RS00390 PF00563 EAL domain QMA0440_RS00395 PF02611 CDP-diacylglycerol pyrophosphatase QMA0440_RS00400 PF03631 Virulence factor BrkB QMA0440_RS00405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family QMA0440_RS00405 PF03466 LysR substrate binding domain QMA0440_RS00410 PF00375 Sodium:dicarboxylate symporter family QMA0440_RS00415 PF01053 Cys/Met metabolism PLP-dependent enzyme QMA0440_RS00420 PF07992 Pyridine nucleotide-disulphide oxidoreductase QMA0440_RS00420 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain QMA0440_RS00425 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ QMA0440_RS00430 PF01432 Peptidase family M3 QMA0440_RS00435 PF04445 Putative SAM-dependent methyltransferase QMA0440_RS00440 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain QMA0440_RS00440 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase QMA0440_RS00445 PF00582 Universal stress protein family QMA0440_RS00450 PF10625 Universal stress protein B (UspB) QMA0440_RS00455 PF01384 Phosphate transporter family QMA0440_RS00465 PF01810 LysE type translocator QMA0440_RS00470 PF00583 Acetyltransferase (GNAT) family QMA0440_RS00475 PF02678 Pirin QMA0440_RS00475 PF17954 Quercetinase C-terminal cupin domain QMA0440_RS00480 PF00356 Bacterial regulatory proteins, lacI family QMA0440_RS00480 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family QMA0440_RS00485 PF02447 GntP family permease QMA0440_RS00490 PF01202 Shikimate kinase QMA0440_RS00495 PF01914 MarC family integral membrane protein QMA0440_RS00500 PF01118 Semialdehyde dehydrogenase, NAD binding domain QMA0440_RS00500 PF02774 Semialdehyde dehydrogenase, dimerisation domain QMA0440_RS00505 PF07694 5TMR of 5TMR-LYT QMA0440_RS00505 PF06580 Histidine kinase QMA0440_RS00510 PF00128 Alpha amylase, catalytic domain QMA0440_RS00510 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) QMA0440_RS00510 PF02806 Alpha amylase, C-terminal all-beta domain QMA0440_RS00515 PF18390 Glycogen debranching enzyme C-terminal domain QMA0440_RS00515 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) QMA0440_RS00515 PF00128 Alpha amylase, catalytic domain QMA0440_RS00520 PF00483 Nucleotidyl transferase QMA0440_RS00525 PF08323 Starch synthase catalytic domain QMA0440_RS00525 PF00534 Glycosyl transferases group 1 QMA0440_RS00530 PF00343 Carbohydrate phosphorylase QMA0440_RS00535 PF01266 FAD dependent oxidoreductase QMA0440_RS00535 PF16901 C-terminal domain of alpha-glycerophosphate oxidase QMA0440_RS00540 PF08220 DeoR-like helix-turn-helix domain QMA0440_RS00540 PF00455 DeoR C terminal sensor domain QMA0440_RS00545 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease QMA0440_RS00545 PF01694 Rhomboid family QMA0440_RS00550 PF00581 Rhodanese-like domain QMA0440_RS00555 PF17874 MalT-like TPR region QMA0440_RS00555 PF00196 Bacterial regulatory proteins, luxR family QMA0440_RS00560 PF00343 Carbohydrate phosphorylase QMA0440_RS00565 PF02446 4-alpha-glucanotransferase QMA0440_RS00570 PF01521 Iron-sulphur cluster biosynthesis QMA0440_RS00570 PF01106 NifU-like domain QMA0440_RS00575 PF00156 Phosphoribosyl transferase domain QMA0440_RS00580 PF00561 alpha/beta hydrolase fold QMA0440_RS00590 PF09012 FeoC like transcriptional regulator QMA0440_RS00595 PF02421 Ferrous iron transport protein B QMA0440_RS00595 PF07670 Nucleoside recognition QMA0440_RS00595 PF17910 FeoB cytosolic helical domain QMA0440_RS00595 PF07664 Ferrous iron transport protein B C terminus QMA0440_RS00600 PF04023 FeoA domain QMA0440_RS00605 PF17674 HHH domain QMA0440_RS00605 PF00575 S1 RNA binding domain QMA0440_RS00605 PF16921 Tex protein YqgF-like domain QMA0440_RS00605 PF09371 Tex-like protein N-terminal domain QMA0440_RS00630 PF01272 Transcription elongation factor, GreA/GreB, C-term QMA0440_RS00630 PF03449 Transcription elongation factor, N-terminal QMA0440_RS00635 PF00072 Response regulator receiver domain QMA0440_RS00635 PF00486 Transcriptional regulatory protein, C terminal QMA0440_RS00640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase QMA0440_RS00640 PF00512 His Kinase A (phospho-acceptor) domain QMA0440_RS00640 PF00672 HAMP domain QMA0440_RS00645 PF01293 Phosphoenolpyruvate carboxykinase QMA0440_RS00650 PF01430 Hsp33 protein QMA0440_RS00655 PF01479 S4 domain QMA0440_RS00660 PF13419 Haloacid dehalogenase-like hydrolase QMA0440_RS00665 PF07095 Intracellular growth attenuator protein IgaA QMA0440_RS00670 PF00293 NUDIX domain QMA0440_RS00675 PF17092 Penicillin-binding protein OB-like domain QMA0440_RS00675 PF00912 Transglycosylase QMA0440_RS00675 PF00905 Penicillin binding protein transpeptidase domain QMA0440_RS00700 PF03958 Bacterial type II/III secretion system short domain QMA0440_RS00700 PF00263 Bacterial type II and III secretion system protein QMA0440_RS00705 PF01202 Shikimate kinase QMA0440_RS00710 PF01761 3-dehydroquinate synthase QMA0440_RS00715 PF05036 Sporulation related domain QMA0440_RS00720 PF02086 D12 class N6 adenine-specific DNA methyltransferase QMA0440_RS00725 PF00834 Ribulose-phosphate 3 epimerase family QMA0440_RS00730 PF13419 Haloacid dehalogenase-like hydrolase QMA0440_RS00735 PF00579 tRNA synthetases class I (W and Y) QMA0440_RS00740 PF10414 Sirohaem synthase dimerisation region QMA0440_RS00740 PF14824 Sirohaem biosynthesis protein central QMA0440_RS00740 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases QMA0440_RS00745 PF01226 Formate/nitrite transporter QMA0440_RS00750 PF13806 Rieske-like [2Fe-2S] domain QMA0440_RS00755 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain QMA0440_RS00755 PF07992 Pyridine nucleotide-disulphide oxidoreductase QMA0440_RS00755 PF04324 BFD-like [2Fe-2S] binding domain QMA0440_RS00755 PF01077 Nitrite and sulphite reductase 4Fe-4S domain QMA0440_RS00755 PF18267 Rubredoxin NAD+ reductase C-terminal domain QMA0440_RS00760 PF07969 Amidohydrolase family QMA0440_RS00765 PF07690 Major Facilitator Superfamily QMA0440_RS00780 PF00356 Bacterial regulatory proteins, lacI family QMA0440_RS00785 PF11975 Family 4 glycosyl hydrolase C-terminal domain QMA0440_RS00785 PF02056 Family 4 glycosyl hydrolase QMA0440_RS00790 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD QMA0440_RS00795 PF00117 Glutamine amidotransferase class-I QMA0440_RS00800 PF00202 Aminotransferase class-III QMA0440_RS00805 PF12805 FUSC-like inner membrane protein yccS QMA0440_RS00810 PF00027 Cyclic nucleotide-binding domain QMA0440_RS00810 PF13545 Crp-like helix-turn-helix domain QMA0440_RS00815 PF02566 OsmC-like protein QMA0440_RS00835 PF00156 Phosphoribosyl transferase domain QMA0440_RS00840 PF00291 Pyridoxal-phosphate dependent enzyme QMA0440_RS00845 PF00485 Phosphoribulokinase / Uridine kinase family QMA0440_RS00850 PF06794 Uncharacterised protein family (UPF0270) QMA0440_RS00855 PF00561 alpha/beta hydrolase fold QMA0440_RS00860 PF01810 LysE type translocator QMA0440_RS00865 PF01075 Glycosyltransferase family 9 (heptosyltransferase) QMA0440_RS00870 PF00535 Glycosyl transferase family 2 QMA0440_RS00875 PF00005 ABC transporter QMA0440_RS00875 PF12848 ABC transporter QMA0440_RS00880 PF02525 Flavodoxin-like fold QMA0440_RS00885 PF02254 TrkA-N domain QMA0440_RS00885 PF00999 Sodium/hydrogen exchanger family QMA0440_RS00890 PF09526 Probable metal-binding protein (DUF2387) QMA0440_RS00895 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase QMA0440_RS00900 PF04102 SlyX QMA0440_RS00905 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase QMA0440_RS00905 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase QMA0440_RS00910 PF08348 YheO-like PAS domain QMA0440_RS00910 PF13309 HTH domain QMA0440_RS00915 PF02635 DsrE/DsrF-like family QMA0440_RS00920 PF02635 DsrE/DsrF-like family QMA0440_RS00925 PF04077 DsrH like protein QMA0440_RS00930 PF00164 Ribosomal protein S12/S23 QMA0440_RS00935 PF00177 Ribosomal protein S7p/S5e QMA0440_RS00940 PF00679 Elongation factor G C-terminus QMA0440_RS00940 PF14492 Elongation Factor G, domain II QMA0440_RS00940 PF03764 Elongation factor G, domain IV QMA0440_RS00940 PF00009 Elongation factor Tu GTP binding domain QMA0440_RS00940 PF03144 Elongation factor Tu domain 2 QMA0440_RS00950 PF03143 Elongation factor Tu C-terminal domain QMA0440_RS00950 PF00009 Elongation factor Tu GTP binding domain QMA0440_RS00950 PF03144 Elongation factor Tu domain 2 QMA0440_RS00955 PF04324 BFD-like [2Fe-2S] binding domain QMA0440_RS00960 PF00210 Ferritin-like domain QMA0440_RS00965 PF00338 Ribosomal protein S10p/S20e QMA0440_RS00970 PF00297 Ribosomal protein L3 QMA0440_RS00975 PF00573 Ribosomal protein L4/L1 family QMA0440_RS00980 PF00276 Ribosomal protein L23 QMA0440_RS00985 PF00181 Ribosomal Proteins L2, RNA binding domain QMA0440_RS00985 PF03947 Ribosomal Proteins L2, C-terminal domain QMA0440_RS00990 PF00203 Ribosomal protein S19 QMA0440_RS00995 PF00237 Ribosomal protein L22p/L17e QMA0440_RS01000 PF00189 Ribosomal protein S3, C-terminal domain QMA0440_RS01000 PF07650 KH domain QMA0440_RS01005 PF00252 Ribosomal protein L16p/L10e QMA0440_RS01010 PF00831 Ribosomal L29 protein QMA0440_RS01015 PF00366 Ribosomal protein S17 QMA0440_RS01020 PF00238 Ribosomal protein L14p/L23e QMA0440_RS01025 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 QMA0440_RS01025 PF00467 KOW motif QMA0440_RS01030 PF00281 Ribosomal protein L5 QMA0440_RS01030 PF00673 ribosomal L5P family C-terminus QMA0440_RS01035 PF00253 Ribosomal protein S14p/S29e QMA0440_RS01040 PF00410 Ribosomal protein S8 QMA0440_RS01045 PF00347 Ribosomal protein L6 QMA0440_RS01050 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast QMA0440_RS01055 PF03719 Ribosomal protein S5, C-terminal domain QMA0440_RS01055 PF00333 Ribosomal protein S5, N-terminal domain QMA0440_RS01060 PF00327 Ribosomal protein L30p/L7e QMA0440_RS01065 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A QMA0440_RS01070 PF00344 SecY translocase QMA0440_RS01075 PF00444 Ribosomal protein L36 QMA0440_RS01080 PF00416 Ribosomal protein S13/S18 QMA0440_RS01085 PF00411 Ribosomal protein S11 QMA0440_RS01090 PF01479 S4 domain QMA0440_RS01090 PF00163 Ribosomal protein S4/S9 N-terminal domain QMA0440_RS01095 PF01000 RNA polymerase Rpb3/RpoA insert domain QMA0440_RS01095 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain QMA0440_RS01095 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain QMA0440_RS01100 PF01196 Ribosomal protein L17 QMA0440_RS01105 PF13411 MerR HTH family regulatory protein QMA0440_RS01110 PF03889 Alternative ribosome-rescue factor A QMA0440_RS01115 PF01741 Large-conductance mechanosensitive channel, MscL QMA0440_RS01120 PF02080 TrkA-C domain QMA0440_RS01120 PF02254 TrkA-N domain QMA0440_RS01125 PF01189 16S rRNA methyltransferase RsmB/F QMA0440_RS01125 PF01029 NusB family QMA0440_RS01130 PF02911 Formyl transferase, C-terminal domain QMA0440_RS01130 PF00551 Formyl transferase QMA0440_RS01135 PF01327 Polypeptide deformylase QMA0440_RS01140 PF02481 DNA recombination-mediator protein A QMA0440_RS01140 PF17782 DprA winged helix domain QMA0440_RS01145 PF04361 Protein of unknown function (DUF494) QMA0440_RS01150 PF01396 Topoisomerase DNA binding C4 zinc finger QMA0440_RS01155 PF01300 Telomere recombination QMA0440_RS01160 PF08501 Shikimate dehydrogenase substrate binding domain QMA0440_RS01160 PF18317 Shikimate 5'-dehydrogenase C-terminal domain QMA0440_RS01160 PF01488 Shikimate / quinate 5-dehydrogenase QMA0440_RS01165 PF00132 Bacterial transferase hexapeptide (six repeats) QMA0440_RS01195 PF01565 FAD binding domain QMA0440_RS01195 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain QMA0440_RS01200 PF02237 Biotin protein ligase C terminal domain QMA0440_RS01200 PF03099 Biotin/lipoate A/B protein ligase family QMA0440_RS01200 PF08279 HTH domain QMA0440_RS01205 PF00485 Phosphoribulokinase / Uridine kinase family QMA0440_RS01230 PF03143 Elongation factor Tu C-terminal domain QMA0440_RS01230 PF00009 Elongation factor Tu GTP binding domain QMA0440_RS01230 PF03144 Elongation factor Tu domain 2 QMA0440_RS01235 PF00584 SecE/Sec61-gamma subunits of protein translocation complex QMA0440_RS01240 PF02357 Transcription termination factor nusG QMA0440_RS01240 PF00467 KOW motif QMA0440_RS01245 PF03946 Ribosomal protein L11, N-terminal domain QMA0440_RS01245 PF00298 Ribosomal protein L11, RNA binding domain QMA0440_RS01250 PF00687 Ribosomal protein L1p/L10e family QMA0440_RS01260 PF00466 Ribosomal protein L10 QMA0440_RS01265 PF16320 Ribosomal protein L7/L12 dimerisation domain QMA0440_RS01265 PF00542 Ribosomal protein L7/L12 C-terminal domain QMA0440_RS01270 PF04560 RNA polymerase Rpb2, domain 7 QMA0440_RS01270 PF00562 RNA polymerase Rpb2, domain 6 QMA0440_RS01270 PF04563 RNA polymerase beta subunit QMA0440_RS01270 PF10385 RNA polymerase beta subunit external 1 domain QMA0440_RS01270 PF04565 RNA polymerase Rpb2, domain 3 QMA0440_RS01270 PF04561 RNA polymerase Rpb2, domain 2 QMA0440_RS01275 PF04997 RNA polymerase Rpb1, domain 1 QMA0440_RS01275 PF00623 RNA polymerase Rpb1, domain 2 QMA0440_RS01275 PF04983 RNA polymerase Rpb1, domain 3 QMA0440_RS01275 PF05000 RNA polymerase Rpb1, domain 4 QMA0440_RS01275 PF04998 RNA polymerase Rpb1, domain 5 QMA0440_RS01280 PF06968 Biotin and Thiamin Synthesis associated domain QMA0440_RS01280 PF04055 Radical SAM superfamily QMA0440_RS01285 PF05690 Thiazole biosynthesis protein ThiG QMA0440_RS01290 PF02597 ThiS family QMA0440_RS01295 PF00899 ThiF family QMA0440_RS01300 PF02581 Thiamine monophosphate synthase QMA0440_RS01305 PF13667 ThiC-associated domain QMA0440_RS01305 PF01964 Radical SAM ThiC family QMA0440_RS01310 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ QMA0440_RS01315 PF09297 NADH pyrophosphatase zinc ribbon domain QMA0440_RS01315 PF00293 NUDIX domain QMA0440_RS01320 PF01208 Uroporphyrinogen decarboxylase (URO-D) QMA0440_RS01325 PF04493 Endonuclease V QMA0440_RS01330 PF04222 Protein of unknown function (DUF416) QMA0440_RS01335 PF00216 Bacterial DNA-binding protein QMA0440_RS01340 PF07356 Protein of unknown function (DUF1481) QMA0440_RS01345 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain QMA0440_RS01345 PF02843 Phosphoribosylglycinamide synthetase, C domain QMA0440_RS01345 PF02844 Phosphoribosylglycinamide synthetase, N domain QMA0440_RS01350 PF02142 MGS-like domain QMA0440_RS01350 PF01808 AICARFT/IMPCHase bienzyme QMA0440_RS01395 PF04204 Homoserine O-succinyltransferase QMA0440_RS01400 PF01274 Malate synthase QMA0440_RS01405 PF00463 Isocitrate lyase family QMA0440_RS01410 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) QMA0440_RS01415 PF01614 Bacterial transcriptional regulator QMA0440_RS01415 PF09339 IclR helix-turn-helix domain QMA0440_RS01420 PF02574 Homocysteine S-methyltransferase QMA0440_RS01420 PF02310 B12 binding domain QMA0440_RS01420 PF02607 B12 binding domain QMA0440_RS01420 PF02965 Vitamin B12 dependent methionine synthase, activation domain QMA0440_RS01420 PF00809 Pterin binding enzyme QMA0440_RS01435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family QMA0440_RS01435 PF03466 LysR substrate binding domain QMA0440_RS01440 PF03400 IS1 transposase QMA0440_RS01520 PF17758 Proteasomal ATPase OB N-terminal domain QMA0440_RS01520 PF00004 ATPase family associated with various cellular activities (AAA) QMA0440_RS01520 PF16450 Proteasomal ATPase OB C-terminal domain QMA0440_RS01530 PF04488 Glycosyltransferase sugar-binding region containing DXD motif QMA0440_RS01540 PF11924 Inverse autotransporter, beta-domain QMA0440_RS01540 PF02369 Bacterial Ig-like domain (group 1) QMA0440_RS01540 PF07979 Intimin C-type lectin domain QMA0440_RS01540 PF09134 Invasin, domain 3 QMA0440_RS01545 PF00872 Transposase, Mutator family QMA0440_RS01550 PF13332 Hemagglutinin repeat QMA0440_RS01550 PF05860 haemagglutination activity domain QMA0440_RS01555 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB QMA0440_RS01555 PF08479 POTRA domain, ShlB-type QMA0440_RS01555 PF17287 POTRA domain QMA0440_RS01560 PF00696 Amino acid kinase family QMA0440_RS01560 PF01842 ACT domain QMA0440_RS01565 PF00342 Phosphoglucose isomerase QMA0440_RS01570 PF06146 Phosphate-starvation-inducible E QMA0440_RS01575 PF00528 Binding-protein-dependent transport system inner membrane component QMA0440_RS01580 PF14785 Maltose transport system permease protein MalF P2 domain QMA0440_RS01580 PF00528 Binding-protein-dependent transport system inner membrane component QMA0440_RS01585 PF01547 Bacterial extracellular solute-binding protein QMA0440_RS01595 PF00005 ABC transporter QMA0440_RS01595 PF17912 MalK OB fold domain QMA0440_RS01600 PF02264 LamB porin QMA0440_RS01605 PF07148 Maltose operon periplasmic protein precursor (MalM) QMA0440_RS01610 PF04345 Chorismate lyase QMA0440_RS01615 PF01040 UbiA prenyltransferase family QMA0440_RS01620 PF01553 Acyltransferase QMA0440_RS01625 PF01219 Prokaryotic diacylglycerol kinase QMA0440_RS01630 PF00717 Peptidase S24-like QMA0440_RS01630 PF01726 LexA DNA binding domain QMA0440_RS01635 PF01475 Ferric uptake regulator family QMA0440_RS01640 PF01207 Dihydrouridine synthase (Dus) QMA0440_RS01645 PF09583 Phage shock protein G (Phageshock_PspG) QMA0440_RS01650 PF00107 Zinc-binding dehydrogenase QMA0440_RS01650 PF08240 Alcohol dehydrogenase GroES-like domain QMA0440_RS01655 PF03796 DnaB-like helicase C terminal domain QMA0440_RS01655 PF00772 DnaB-like helicase N terminal domain QMA0440_RS01660 PF00842 Alanine racemase, C-terminal domain QMA0440_RS01660 PF01168 Alanine racemase, N-terminal domain QMA0440_RS01665 PF00155 Aminotransferase class I and II QMA0440_RS01670 PF04237 YjbR QMA0440_RS01675 PF00005 ABC transporter QMA0440_RS01675 PF17755 UvrA DNA-binding domain QMA0440_RS01675 PF17760 UvrA interaction domain QMA0440_RS01680 PF00436 Single-strand binding protein family QMA0440_RS01690 PF00860 Permease family QMA0440_RS01695 PF00999 Sodium/hydrogen exchanger family QMA0440_RS01700 PF03466 LysR substrate binding domain QMA0440_RS01700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family QMA0440_RS01705 PF03788 LrgA family QMA0440_RS01710 PF04172 LrgB-like family QMA0440_RS01715 PF00484 Carbonic anhydrase QMA0440_RS01720 PF03279 Bacterial lipid A biosynthesis acyltransferase QMA0440_RS01730 PF02954 Bacterial regulatory protein, Fis family QMA0440_RS01735 PF01207 Dihydrouridine synthase (Dus) QMA0440_RS01745 PF00474 Sodium:solute symporter family QMA0440_RS01750 PF06196 Protein of unknown function (DUF997) QMA0440_RS01755 PF00289 Biotin carboxylase, N-terminal domain QMA0440_RS01755 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain QMA0440_RS01755 PF02785 Biotin carboxylase C-terminal domain QMA0440_RS01760 PF00364 Biotin-requiring enzyme QMA0440_RS01765 PF01220 Dehydroquinase class II QMA0440_RS01770 PF01794 Ferric reductase like transmembrane component QMA0440_RS01775 PF00174 Oxidoreductase molybdopterin binding domain QMA0440_RS01780 PF00107 Zinc-binding dehydrogenase QMA0440_RS01780 PF08240 Alcohol dehydrogenase GroES-like domain QMA0440_RS01785 PF00990 Diguanylate cyclase, GGDEF domain QMA0440_RS01785 PF17157 Gammaproteobacterial periplasmic sensor domain QMA0440_RS01785 PF00563 EAL domain QMA0440_RS01795 PF04085 rod shape-determining protein MreC QMA0440_RS01800 PF04093 rod shape-determining protein MreD QMA0440_RS01805 PF02545 Maf-like protein QMA0440_RS01810 PF10150 Ribonuclease E/G family QMA0440_RS01810 PF00575 S1 RNA binding domain QMA0440_RS01815 PF13116 Protein of unknown function QMA0440_RS01815 PF13502 AsmA-like C-terminal region QMA0440_RS01820 PF00795 Carbon-nitrogen hydrolase QMA0440_RS01825 PF01523 Putative modulator of DNA gyrase QMA0440_RS01830 PF03466 LysR substrate binding domain QMA0440_RS01830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family QMA0440_RS01835 PF07869 Protein of unknown function (DUF1656) QMA0440_RS01840 PF13533 Biotin-lipoyl like QMA0440_RS01845 PF04632 Fusaric acid resistance protein family QMA0440_RS01850 PF00171 Aldehyde dehydrogenase family QMA0440_RS01855 PF00545 ribonuclease QMA0440_RS01860 PF01337 Barstar (barnase inhibitor) QMA0440_RS01865 PF04751 Protein of unknown function (DUF615) QMA0440_RS01870 PF01523 Putative modulator of DNA gyrase QMA0440_RS01875 PF07361 Cytochrome b562 QMA0440_RS01880 PF14760 Rnk N-terminus QMA0440_RS01880 PF01272 Transcription elongation factor, GreA/GreB, C-term QMA0440_RS01895 PF00690 Cation transporter/ATPase, N-terminus QMA0440_RS01895 PF00689 Cation transporting ATPase, C-terminus QMA0440_RS01900 PF00356 Bacterial regulatory proteins, lacI family QMA0440_RS01905 PF00367 phosphotransferase system, EIIB QMA0440_RS01905 PF02378 Phosphotransferase system, EIIC QMA0440_RS01910 PF11941 Domain of unknown function (DUF3459) QMA0440_RS01910 PF00128 Alpha amylase, catalytic domain QMA0440_RS01915 PF01042 Endoribonuclease L-PSP QMA0440_RS01920 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain QMA0440_RS01920 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain QMA0440_RS01925 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain QMA0440_RS01925 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain QMA0440_RS01930 PF00381 PTS HPr component phosphorylation site QMA0440_RS01935 PF03668 P-loop ATPase protein family QMA0440_RS01940 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 QMA0440_RS01945 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein QMA0440_RS01950 PF04552 Sigma-54, DNA binding domain QMA0440_RS01950 PF04963 Sigma-54 factor, core binding domain QMA0440_RS01950 PF00309 Sigma-54 factor, Activator interacting domain (AID) QMA0440_RS01955 PF12399 Branched-chain amino acid ATP-binding cassette transporter QMA0440_RS01955 PF00005 ABC transporter QMA0440_RS01960 PF03968 OstA-like protein QMA0440_RS01965 PF06835 Lipopolysaccharide-assembly, LptC-related QMA0440_RS01975 PF01380 SIS domain QMA0440_RS01975 PF00571 CBS domain QMA0440_RS01980 PF01699 Sodium/calcium exchanger protein QMA0440_RS01985 PF00005 ABC transporter QMA0440_RS01990 PF02405 Permease MlaE QMA0440_RS01995 PF02470 MlaD protein QMA0440_RS02000 PF05494 MlaC protein QMA0440_RS02005 PF13466 STAS domain QMA0440_RS02010 PF01722 BolA-like protein QMA0440_RS02015 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) QMA0440_RS02020 PF13180 PDZ domain QMA0440_RS02025 PF00595 PDZ domain QMA0440_RS02025 PF13180 PDZ domain QMA0440_RS02030 PF06295 Protein of unknown function (DUF1043) QMA0440_RS02040 PF03969 AFG1-like ATPase QMA0440_RS02050 PF00572 Ribosomal protein L13 QMA0440_RS02055 PF00380 Ribosomal protein S9/S16 QMA0440_RS02060 PF02798 Glutathione S-transferase, N-terminal domain QMA0440_RS02060 PF00043 Glutathione S-transferase, C-terminal domain QMA0440_RS02065 PF04386 Stringent starvation protein B QMA0440_RS02075 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster QMA0440_RS02075 PF07992 Pyridine nucleotide-disulphide oxidoreductase QMA0440_RS02080 PF01645 Conserved region in glutamate synthase QMA0440_RS02080 PF00310 Glutamine amidotransferases class-II QMA0440_RS02080 PF04898 Glutamate synthase central domain QMA0440_RS02080 PF01493 GXGXG motif QMA0440_RS02085 PF04055 Radical SAM superfamily QMA0440_RS02085 PF16199 Radical_SAM C-terminal domain QMA0440_RS02090 PF18415 Histidine kinase receptor ArcB trans-membrane domain QMA0440_RS02090 PF01627 Hpt domain QMA0440_RS02090 PF00989 PAS fold QMA0440_RS02090 PF00072 Response regulator receiver domain QMA0440_RS02090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase QMA0440_RS02090 PF00512 His Kinase A (phospho-acceptor) domain QMA0440_RS02105 PF00912 Transglycosylase QMA0440_RS02110 PF04972 BON domain QMA0440_RS02115 PF13580 SIS domain QMA0440_RS02120 PF02021 Uncharacterised protein family UPF0102 QMA0440_RS02125 PF04348 LppC putative lipoprotein QMA0440_RS02130 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases QMA0440_RS02140 PF02678 Pirin QMA0440_RS02140 PF17954 Quercetinase C-terminal cupin domain QMA0440_RS02145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family QMA0440_RS02145 PF03466 LysR substrate binding domain QMA0440_RS02150 PF07681 DoxX QMA0440_RS02155 PF13997 YqjK-like protein QMA0440_RS02160 PF07332 Putative Actinobacterial Holin-X, holin superfamily III QMA0440_RS02165 PF05957 Bacterial protein of unknown function (DUF883) QMA0440_RS02175 PF13721 SecD export protein N-terminal TM region QMA0440_RS02180 PF09335 SNARE associated Golgi protein QMA0440_RS02190 PF07729 FCD domain QMA0440_RS02190 PF00392 Bacterial regulatory proteins, gntR family QMA0440_RS02195 PF07690 Major Facilitator Superfamily QMA0440_RS02200 PF02614 Glucuronate isomerase QMA0440_RS02205 PF08125 Mannitol dehydrogenase C-terminal domain QMA0440_RS02205 PF01232 Mannitol dehydrogenase Rossmann domain QMA0440_RS02210 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus QMA0440_RS02210 PF08666 SAF domain QMA0440_RS02215 PF10688 Bacterial inner membrane protein QMA0440_RS02220 PF00375 Sodium:dicarboxylate symporter family QMA0440_RS02225 PF03741 Integral membrane protein TerC family QMA0440_RS02230 PF01408 Oxidoreductase family, NAD-binding Rossmann fold QMA0440_RS02235 PF01863 Protein of unknown function DUF45 QMA0440_RS02245 PF05175 Methyltransferase small domain QMA0440_RS02250 PF07992 Pyridine nucleotide-disulphide oxidoreductase QMA0440_RS02250 PF00724 NADH:flavin oxidoreductase / NADH oxidase family QMA0440_RS02255 PF08479 POTRA domain, ShlB-type QMA0440_RS02255 PF17287 POTRA domain QMA0440_RS02255 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB QMA0440_RS02260 PF05860 haemagglutination activity domain QMA0440_RS02260 PF13332 Hemagglutinin repeat QMA0440_RS02260 PF13018 Extended Signal Peptide of Type V secretion system QMA0440_RS02260 PF04829 Pre-toxin domain with VENN motif QMA0440_RS02275 PF04829 Pre-toxin domain with VENN motif QMA0440_RS02275 PF05860 haemagglutination activity domain QMA0440_RS02275 PF05594 Haemagluttinin repeat QMA0440_RS02275 PF13332 Hemagglutinin repeat QMA0440_RS02290 PF05860 haemagglutination activity domain QMA0440_RS02290 PF04829 Pre-toxin domain with VENN motif QMA0440_RS02290 PF13018 Extended Signal Peptide of Type V secretion system QMA0440_RS02290 PF13332 Hemagglutinin repeat QMA0440_RS02310 PF00535 Glycosyl transferase family 2 QMA0440_RS02315 PF08241 Methyltransferase domain QMA0440_RS02340 PF00665 Integrase core domain QMA0440_RS02340 PF13333 Integrase core domain QMA0440_RS02340 PF13276 HTH-like domain QMA0440_RS02350 PF00106 short chain dehydrogenase QMA0440_RS02360 PF13411 MerR HTH family regulatory protein QMA0440_RS02375 PF00140 Sigma-70 factor, region 1.2 QMA0440_RS02375 PF03979 Sigma-70 factor, region 1.1 QMA0440_RS02375 PF04546 Sigma-70, non-essential region QMA0440_RS02375 PF04539 Sigma-70 region 3 QMA0440_RS02375 PF04545 Sigma-70, region 4 QMA0440_RS02375 PF04542 Sigma-70 region 2 QMA0440_RS02380 PF08278 DNA primase DnaG DnaB-binding QMA0440_RS02380 PF01807 CHC2 zinc finger QMA0440_RS02380 PF08275 DNA primase catalytic core, N-terminal domain QMA0440_RS02380 PF10410 DnaB-helicase binding domain of primase QMA0440_RS02385 PF01165 Ribosomal protein S21 QMA0440_RS02395 PF00814 Glycoprotease family QMA0440_RS02400 PF02660 Glycerol-3-phosphate acyltransferase QMA0440_RS02405 PF02152 Dihydroneopterin aldolase QMA0440_RS02410 PF02673 Bacitracin resistance protein BacA QMA0440_RS02415 PF12627 Probable RNA and SrmB- binding site of polymerase A QMA0440_RS02415 PF01743 Poly A polymerase head domain QMA0440_RS02415 PF01966 HD domain QMA0440_RS02420 PF08239 Bacterial SH3 domain QMA0440_RS02425 PF01928 CYTH domain QMA0440_RS02430 PF08335 GlnD PII-uridylyltransferase QMA0440_RS02430 PF03710 Glutamate-ammonia ligase adenylyltransferase QMA0440_RS02435 PF00294 pfkB family carbohydrate kinase QMA0440_RS02435 PF01467 Cytidylyltransferase-like QMA0440_RS02440 PF04380 Membrane fusogenic activity QMA0440_RS02445 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase QMA0440_RS02450 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase QMA0440_RS02455 PF03738 Glutathionylspermidine synthase preATP-grasp QMA0440_RS02460 PF06693 Protein of unknown function (DUF1190) QMA0440_RS02465 PF02321 Outer membrane efflux protein QMA0440_RS02470 PF00293 NUDIX domain QMA0440_RS02475 PF06853 Protein of unknown function (DUF1249) QMA0440_RS02480 PF00149 Calcineurin-like phosphoesterase QMA0440_RS02485 PF05728 Uncharacterised protein family (UPF0227) QMA0440_RS02490 PF00986 DNA gyrase B subunit, carboxyl terminus QMA0440_RS02490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase QMA0440_RS02490 PF00204 DNA gyrase B QMA0440_RS02490 PF01751 Toprim domain QMA0440_RS02495 PF03466 LysR substrate binding domain QMA0440_RS02495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family QMA0440_RS02500 PF02525 Flavodoxin-like fold QMA0440_RS02505 PF00521 DNA gyrase/topoisomerase IV, subunit A QMA0440_RS02505 PF03989 DNA gyrase C-terminal domain, beta-propeller QMA0440_RS02510 PF01553 Acyltransferase QMA0440_RS02515 PF07732 Multicopper oxidase QMA0440_RS02515 PF07731 Multicopper oxidase QMA0440_RS02520 PF11842 Domain of unknown function (DUF3362) QMA0440_RS02520 PF08497 Radical SAM N-terminal QMA0440_RS02520 PF04055 Radical SAM superfamily QMA0440_RS02525 PF00248 Aldo/keto reductase family QMA0440_RS02530 PF00465 Iron-containing alcohol dehydrogenase QMA0440_RS02535 PF06719 AraC-type transcriptional regulator N-terminus QMA0440_RS02535 PF12833 Helix-turn-helix domain QMA0440_RS02540 PF09335 SNARE associated Golgi protein QMA0440_RS02545 PF01053 Cys/Met metabolism PLP-dependent enzyme QMA0440_RS02550 PF01618 MotA/TolQ/ExbB proton channel family QMA0440_RS02555 PF02472 Biopolymer transport protein ExbD/TolR QMA0440_RS02590 PF00437 Type II/IV secretion system protein QMA0440_RS02610 PF04972 BON domain QMA0440_RS02610 PF00263 Bacterial type II and III secretion system protein QMA0440_RS02610 PF13629 Pilus formation protein N terminal region QMA0440_RS02635 PF08501 Shikimate dehydrogenase substrate binding domain QMA0440_RS02640 PF00593 TonB dependent receptor QMA0440_RS02640 PF07715 TonB-dependent Receptor Plug Domain QMA0440_RS02645 PF00756 Putative esterase QMA0440_RS02645 PF11806 Domain of unknown function (DUF3327) QMA0440_RS02650 PF03621 MbtH-like protein QMA0440_RS02655 PF00668 Condensation domain QMA0440_RS02655 PF13193 AMP-binding enzyme C-terminal domain QMA0440_RS02655 PF00550 Phosphopantetheine attachment site QMA0440_RS02655 PF00975 Thioesterase domain QMA0440_RS02655 PF00501 AMP-binding enzyme QMA0440_RS02665 PF00005 ABC transporter QMA0440_RS02670 PF01032 FecCD transport family QMA0440_RS02675 PF01032 FecCD transport family QMA0440_RS02680 PF05977 Transmembrane secretion effector QMA0440_RS02685 PF01497 Periplasmic binding protein QMA0440_RS02690 PF00425 chorismate binding enzyme QMA0440_RS02695 PF00501 AMP-binding enzyme QMA0440_RS02695 PF13193 AMP-binding enzyme C-terminal domain QMA0440_RS02700 PF00857 Isochorismatase family QMA0440_RS02700 PF00550 Phosphopantetheine attachment site QMA0440_RS02710 PF00550 Phosphopantetheine attachment site QMA0440_RS02710 PF00501 AMP-binding enzyme QMA0440_RS02710 PF00975 Thioesterase domain QMA0440_RS02710 PF13193 AMP-binding enzyme C-terminal domain QMA0440_RS02710 PF00668 Condensation domain QMA0440_RS02715 PF00291 Pyridoxal-phosphate dependent enzyme QMA0440_RS02720 PF01490 Transmembrane amino acid transporter protein QMA0440_RS02725 PF00871 Acetokinase family QMA0440_RS02730 PF02901 Pyruvate formate lyase-like QMA0440_RS02730 PF01228 Glycine radical QMA0440_RS02740 PF00294 pfkB family carbohydrate kinase QMA0440_RS02775 PF01464 Transglycosylase SLT domain QMA0440_RS02775 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain QMA0440_RS02780 PF04362 Bacterial Fe(2+) trafficking QMA0440_RS02785 PF10576 Iron-sulfur binding domain of endonuclease III QMA0440_RS02785 PF00633 Helix-hairpin-helix motif QMA0440_RS02785 PF00730 HhH-GPD superfamily base excision DNA repair protein QMA0440_RS02785 PF14815 NUDIX domain QMA0440_RS02790 PF02390 Putative methyltransferase QMA0440_RS02795 PF04320 Protein with unknown function (DUF469) QMA0440_RS02800 PF04960 Glutaminase QMA0440_RS02805 PF11101 Protein of unknown function (DUF2884) QMA0440_RS02810 PF06969 HemN C-terminal domain QMA0440_RS02810 PF04055 Radical SAM superfamily QMA0440_RS02815 PF01725 Ham1 family QMA0440_RS02820 PF02594 Uncharacterised ACR, YggU family COG1872 QMA0440_RS02825 PF02325 YGGT family QMA0440_RS02830 PF03807 NADP oxidoreductase coenzyme F420-dependent QMA0440_RS02830 PF14748 Pyrroline-5-carboxylate reductase dimerisation QMA0440_RS02835 PF01168 Alanine racemase, N-terminal domain QMA0440_RS02840 PF00437 Type II/IV secretion system protein QMA0440_RS02845 PF04371 Porphyromonas-type peptidyl-arginine deiminase QMA0440_RS02850 PF00795 Carbon-nitrogen hydrolase QMA0440_RS02855 PF03652 Holliday junction resolvase QMA0440_RS02860 PF02622 Uncharacterized ACR, COG1678 QMA0440_RS02865 PF02951 Prokaryotic glutathione synthetase, N-terminal domain QMA0440_RS02865 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain QMA0440_RS02870 PF04452 RNA methyltransferase QMA0440_RS02875 PF04231 Endonuclease I QMA0440_RS02880 PF10263 SprT-like family QMA0440_RS02880 PF17283 SprT-like zinc ribbon domain QMA0440_RS02890 PF04143 Sulphur transport QMA0440_RS02900 PF02773 S-adenosylmethionine synthetase, C-terminal domain QMA0440_RS02900 PF02772 S-adenosylmethionine synthetase, central domain QMA0440_RS02900 PF00438 S-adenosylmethionine synthetase, N-terminal domain QMA0440_RS02905 PF17944 Arginine decarboxylase C-terminal helical extension QMA0440_RS02905 PF17810 Arginine decarboxylase helical bundle domain QMA0440_RS02905 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain QMA0440_RS02915 PF00456 Transketolase, thiamine diphosphate binding domain QMA0440_RS02915 PF02780 Transketolase, C-terminal domain QMA0440_RS02915 PF02779 Transketolase, pyrimidine binding domain QMA0440_RS02920 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain QMA0440_RS02920 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain QMA0440_RS02925 PF00162 Phosphoglycerate kinase QMA0440_RS02930 PF01116 Fructose-bisphosphate aldolase class-II QMA0440_RS02935 PF00924 Mechanosensitive ion channel QMA0440_RS02935 PF05552 Conserved TM helix QMA0440_RS02940 PF01810 LysE type translocator QMA0440_RS02945 PF04402 Protein of unknown function (DUF541) QMA0440_RS02950 PF03466 LysR substrate binding domain QMA0440_RS02950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family QMA0440_RS02955 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) QMA0440_RS02960 PF01842 ACT domain QMA0440_RS02960 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain QMA0440_RS02960 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain QMA0440_RS02965 PF01812 5-formyltetrahydrofolate cyclo-ligase family QMA0440_RS02975 PF05164 Cell division protein ZapA QMA0440_RS02980 PF03695 Uncharacterised protein family (UPF0149) QMA0440_RS02985 PF05195 Aminopeptidase P, N-terminal domain QMA0440_RS02985 PF00557 Metallopeptidase family M24 QMA0440_RS02990 PF01494 FAD binding domain QMA0440_RS02995 PF01494 FAD binding domain QMA0440_RS03000 PF01571 Aminomethyltransferase folate-binding domain QMA0440_RS03000 PF08669 Glycine cleavage T-protein C-terminal barrel domain QMA0440_RS03005 PF01597 Glycine cleavage H-protein QMA0440_RS03010 PF02347 Glycine cleavage system P-protein QMA0440_RS03020 PF03006 Haemolysin-III related QMA0440_RS03025 PF01571 Aminomethyltransferase folate-binding domain QMA0440_RS03030 PF03937 Flavinator of succinate dehydrogenase QMA0440_RS03035 PF07254 Membrane-bound toxin component of toxin-antitoxin system QMA0440_RS03040 PF00258 Flavodoxin QMA0440_RS03045 PF00589 Phage integrase family QMA0440_RS03045 PF02899 Phage integrase, N-terminal SAM-like domain QMA0440_RS03050 PF13098 Thioredoxin-like domain QMA0440_RS03050 PF10411 Disulfide bond isomerase protein N-terminus QMA0440_RS03055 PF02272 DHHA1 domain QMA0440_RS03055 PF01368 DHH family QMA0440_RS03055 PF17768 RecJ OB domain QMA0440_RS03065 PF01336 OB-fold nucleic acid binding domain QMA0440_RS03065 PF00152 tRNA synthetases class II (D, K and N) QMA0440_RS03075 PF02405 Permease MlaE QMA0440_RS03080 PF00005 ABC transporter QMA0440_RS03105 PF00263 Bacterial type II and III secretion system protein QMA0440_RS03105 PF03958 Bacterial type II/III secretion system short domain QMA0440_RS03110 PF00437 Type II/IV secretion system protein QMA0440_RS03115 PF00482 Type II secretion system (T2SS), protein F QMA0440_RS03120 PF08334 Type II secretion system (T2SS), protein G QMA0440_RS03120 PF07963 Prokaryotic N-terminal methylation motif QMA0440_RS03130 PF02501 Type II secretion system (T2SS), protein I QMA0440_RS03130 PF07963 Prokaryotic N-terminal methylation motif QMA0440_RS03135 PF07963 Prokaryotic N-terminal methylation motif QMA0440_RS03135 PF11612 Type II secretion system (T2SS), protein J QMA0440_RS03175 PF03466 LysR substrate binding domain QMA0440_RS03175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family QMA0440_RS03180 PF03466 LysR substrate binding domain QMA0440_RS03180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family QMA0440_RS03185 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain QMA0440_RS03185 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain QMA0440_RS03190 PF00356 Bacterial regulatory proteins, lacI family QMA0440_RS03195 PF01553 Acyltransferase QMA0440_RS03195 PF00501 AMP-binding enzyme QMA0440_RS03195 PF13193 AMP-binding enzyme C-terminal domain QMA0440_RS03200 PF07690 Major Facilitator Superfamily QMA0440_RS03205 PF00248 Aldo/keto reductase family QMA0440_RS03210 PF03741 Integral membrane protein TerC family QMA0440_RS03215 PF02976 DNA mismatch repair enzyme MutH QMA0440_RS03225 PF00293 NUDIX domain QMA0440_RS03230 PF00391 PEP-utilising enzyme, mobile domain QMA0440_RS03230 PF01590 GAF domain QMA0440_RS03230 PF02896 PEP-utilising enzyme, TIM barrel domain QMA0440_RS03230 PF05524 PEP-utilising enzyme, N-terminal QMA0440_RS03235 PF01790 Prolipoprotein diacylglyceryl transferase QMA0440_RS03240 PF00303 Thymidylate synthase QMA0440_RS03250 PF00114 Pilin (bacterial filament) QMA0440_RS03250 PF07963 Prokaryotic N-terminal methylation motif QMA0440_RS03265 PF12528 Type II secretion prepilin peptidase dependent protein C QMA0440_RS03265 PF07963 Prokaryotic N-terminal methylation motif QMA0440_RS03270 PF17946 RecC C-terminal domain QMA0440_RS03275 PF16187 Middle or third domain of peptidase_M16 QMA0440_RS03275 PF05193 Peptidase M16 inactive domain QMA0440_RS03275 PF00675 Insulinase (Peptidase family M16) QMA0440_RS03280 PF13361 UvrD-like helicase C-terminal domain QMA0440_RS03280 PF00580 UvrD/REP helicase N-terminal domain QMA0440_RS03280 PF12705 PD-(D/E)XK nuclease superfamily QMA0440_RS03285 PF13538 UvrD-like helicase C-terminal domain QMA0440_RS03290 PF00583 Acetyltransferase (GNAT) family QMA0440_RS03290 PF00696 Amino acid kinase family QMA0440_RS03295 PF01520 N-acetylmuramoyl-L-alanine amidase QMA0440_RS03295 PF11741 AMIN domain QMA0440_RS03315 PF03562 MltA specific insert domain QMA0440_RS03315 PF06725 3D domain QMA0440_RS03320 PF00899 ThiF family QMA0440_RS03325 PF02657 Fe-S metabolism associated domain QMA0440_RS03330 PF00266 Aminotransferase class-V QMA0440_RS03335 PF06004 Bacterial protein of unknown function (DUF903) QMA0440_RS03340 PF03466 LysR substrate binding domain QMA0440_RS03340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family QMA0440_RS03345 PF04241 Protein of unknown function (DUF423) QMA0440_RS03350 PF01728 FtsJ-like methyltransferase QMA0440_RS03350 PF18125 RlmM ferredoxin-like domain QMA0440_RS03355 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain QMA0440_RS03355 PF01367 5'-3' exonuclease, C-terminal SAM fold QMA0440_RS03360 PF03641 Possible lysine decarboxylase QMA0440_RS03360 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases QMA0440_RS03360 PF11892 Domain of unknown function (DUF3412) QMA0440_RS03365 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term QMA0440_RS03365 PF14489 QueF-like protein QMA0440_RS03370 PF07348 Syd protein (SUKH-2) QMA0440_RS03375 PF04287 tRNA pseudouridine synthase C QMA0440_RS03380 PF00849 RNA pseudouridylate synthase QMA0440_RS03385 PF00258 Flavodoxin QMA0440_RS03390 PF11944 Protein of unknown function (DUF3461) QMA0440_RS03395 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal QMA0440_RS03395 PF14602 Hexapeptide repeat of succinyl-transferase QMA0440_RS03395 PF00132 Bacterial transferase hexapeptide (six repeats) QMA0440_RS03400 PF01966 HD domain QMA0440_RS03400 PF01909 Nucleotidyltransferase domain QMA0440_RS03400 PF08335 GlnD PII-uridylyltransferase QMA0440_RS03400 PF01842 ACT domain QMA0440_RS03405 PF00557 Metallopeptidase family M24 QMA0440_RS03410 PF00318 Ribosomal protein S2 QMA0440_RS03415 PF00889 Elongation factor TS QMA0440_RS03420 PF00696 Amino acid kinase family QMA0440_RS03425 PF01765 Ribosome recycling factor QMA0440_RS03430 PF13288 DXP reductoisomerase C-terminal domain QMA0440_RS03430 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain QMA0440_RS03430 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase QMA0440_RS03435 PF01255 Putative undecaprenyl diphosphate synthase QMA0440_RS03445 PF02163 Peptidase family M50 QMA0440_RS03445 PF17820 PDZ domain QMA0440_RS03450 PF07244 Surface antigen variable number repeat QMA0440_RS03450 PF01103 Surface antigen QMA0440_RS03455 PF03938 Outer membrane protein (OmpH-like) QMA0440_RS03460 PF00132 Bacterial transferase hexapeptide (six repeats) QMA0440_RS03460 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD QMA0440_RS03465 PF07977 FabA-like domain QMA0440_RS03470 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 QMA0440_RS03470 PF00132 Bacterial transferase hexapeptide (six repeats) QMA0440_RS03475 PF02684 Lipid-A-disaccharide synthetase QMA0440_RS03480 PF01351 Ribonuclease HII QMA0440_RS03485 PF01336 OB-fold nucleic acid binding domain QMA0440_RS03485 PF14579 Helix-hairpin-helix motif QMA0440_RS03485 PF07733 Bacterial DNA polymerase III alpha NTPase domain QMA0440_RS03485 PF02811 PHP domain QMA0440_RS03485 PF17657 Bacterial DNA polymerase III alpha subunit finger domain QMA0440_RS03490 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit QMA0440_RS03510 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily QMA0440_RS03515 PF09179 TilS substrate binding domain QMA0440_RS03515 PF01171 PP-loop family QMA0440_RS03515 PF11734 TilS substrate C-terminal domain QMA0440_RS03520 PF00034 Cytochrome c QMA0440_RS03525 PF07073 Modulator of Rho-dependent transcription termination (ROF) QMA0440_RS03530 PF06786 Uncharacterised protein family (UPF0253) QMA0440_RS03535 PF07152 YaeQ protein QMA0440_RS03540 PF00472 RF-1 domain QMA0440_RS03545 PF04170 NlpE N-terminal domain QMA0440_RS03545 PF17185 NlpE C-terminal OB domain QMA0440_RS03550 PF04073 Aminoacyl-tRNA editing domain QMA0440_RS03550 PF03129 Anticodon binding domain QMA0440_RS03550 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) QMA0440_RS03555 PF18389 TrmO C-terminal domain QMA0440_RS03555 PF01980 tRNA-methyltransferase O QMA0440_RS03560 PF16358 RcsF lipoprotein QMA0440_RS03565 PF03180 NLPA lipoprotein QMA0440_RS03570 PF00528 Binding-protein-dependent transport system inner membrane component QMA0440_RS03575 PF00005 ABC transporter QMA0440_RS03575 PF09383 NIL domain QMA0440_RS03610 PF10043 Predicted periplasmic lipoprotein (DUF2279) QMA0440_RS03615 PF13091 PLD-like domain QMA0440_RS03620 PF00583 Acetyltransferase (GNAT) family QMA0440_RS03620 PF13380 CoA binding domain QMA0440_RS03620 PF13607 Succinyl-CoA ligase like flavodoxin domain QMA0440_RS03625 PF03942 DTW domain QMA0440_RS03630 PF00085 Thioredoxin QMA0440_RS03635 PF00588 SpoU rRNA Methylase family QMA0440_RS03635 PF08032 RNA 2'-O ribose methyltransferase substrate binding QMA0440_RS03640 PF07690 Major Facilitator Superfamily QMA0440_RS03645 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion QMA0440_RS03645 PF00529 HlyD membrane-fusion protein of T1SS QMA0440_RS03655 PF01047 MarR family QMA0440_RS03660 PF07690 Major Facilitator Superfamily QMA0440_RS03670 PF04069 Substrate binding domain of ABC-type glycine betaine transport system QMA0440_RS03675 PF00528 Binding-protein-dependent transport system inner membrane component QMA0440_RS03680 PF00005 ABC transporter QMA0440_RS03680 PF00571 CBS domain QMA0440_RS03685 PF00268 Ribonucleotide reductase, small chain QMA0440_RS03690 PF00317 Ribonucleotide reductase, all-alpha domain QMA0440_RS03690 PF02867 Ribonucleotide reductase, barrel domain QMA0440_RS03690 PF08343 Ribonucleotide reductase N-terminal QMA0440_RS03695 PF07972 NrdI Flavodoxin like QMA0440_RS03710 PF09400 Protein of unknown function (DUF2002) QMA0440_RS03715 PF06711 Protein of unknown function (DUF1198) QMA0440_RS03725 PF00313 'Cold-shock' DNA-binding domain QMA0440_RS03730 PF06039 Malate:quinone oxidoreductase (Mqo) QMA0440_RS03735 PF01070 FMN-dependent dehydrogenase QMA0440_RS03740 PF02652 L-lactate permease QMA0440_RS03745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family QMA0440_RS03745 PF03466 LysR substrate binding domain QMA0440_RS03750 PF00561 alpha/beta hydrolase fold QMA0440_RS03760 PF00005 ABC transporter QMA0440_RS03765 PF02653 Branched-chain amino acid transport system / permease component QMA0440_RS03775 PF00370 FGGY family of carbohydrate kinases, N-terminal domain QMA0440_RS03775 PF02782 FGGY family of carbohydrate kinases, C-terminal domain QMA0440_RS03780 PF01380 SIS domain QMA0440_RS03780 PF00571 CBS domain QMA0440_RS03785 PF01527 Transposase QMA0440_RS03800 PF18807 Tripartite Tc toxins repeat QMA0440_RS03800 PF14431 YwqJ-like deaminase QMA0440_RS03805 PF12256 Insecticide toxin TcdB middle/N-terminal region QMA0440_RS03805 PF12255 Insecticide toxin TcdB middle/C-terminal region QMA0440_RS03805 PF03534 Salmonella virulence plasmid 65kDa B protein QMA0440_RS03815 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain QMA0440_RS03815 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain QMA0440_RS03815 PF18413 Neuraminidase-like domain QMA0440_RS03815 PF18413 Neuraminidase-like domain QMA0440_RS03825 PF01527 Transposase QMA0440_RS03835 PF00665 Integrase core domain QMA0440_RS03835 PF13333 Integrase core domain QMA0440_RS03835 PF13276 HTH-like domain QMA0440_RS03845 PF03466 LysR substrate binding domain QMA0440_RS03845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family QMA0440_RS03855 PF02796 Helix-turn-helix domain of resolvase QMA0440_RS03855 PF00239 Resolvase, N terminal domain QMA0440_RS03870 PF13954 PapC N-terminal domain QMA0440_RS03870 PF13953 PapC C-terminal domain QMA0440_RS03870 PF00577 Outer membrane usher protein QMA0440_RS03875 PF02753 Pili assembly chaperone PapD, C-terminal domain QMA0440_RS03875 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain QMA0440_RS03905 PF13356 Arm DNA-binding domain QMA0440_RS03905 PF00589 Phage integrase family QMA0440_RS03915 PF01668 SmpB protein QMA0440_RS03920 PF03364 Polyketide cyclase / dehydrase and lipid transport QMA0440_RS03925 PF03658 RnfH family Ubiquitin QMA0440_RS03930 PF04355 SmpA / OmlA family QMA0440_RS03935 PF02463 RecF/RecN/SMC N terminal domain QMA0440_RS03940 PF01513 ATP-NAD kinase QMA0440_RS03945 PF01025 GrpE QMA0440_RS03950 PF03167 Uracil DNA glycosylase superfamily QMA0440_RS03955 PF01228 Glycine radical QMA0440_RS03965 PF12796 Ankyrin repeats (3 copies) QMA0440_RS03970 PF00270 DEAD/DEAH box helicase QMA0440_RS03970 PF00271 Helicase conserved C-terminal domain QMA0440_RS03975 PF05175 Methyltransferase small domain QMA0440_RS03980 PF00890 FAD binding domain QMA0440_RS03980 PF02910 Fumarate reductase flavoprotein C-term QMA0440_RS03985 PF04542 Sigma-70 region 2 QMA0440_RS03985 PF08281 Sigma-70, region 4 QMA0440_RS03990 PF03872 Anti sigma-E protein RseA, N-terminal domain QMA0440_RS03990 PF03873 Anti sigma-E protein RseA, C-terminal domain QMA0440_RS03995 PF03888 MucB/RseB N-terminal domain QMA0440_RS03995 PF17188 MucB/RseB C-terminal domain QMA0440_RS04005 PF00679 Elongation factor G C-terminus QMA0440_RS04005 PF00009 Elongation factor Tu GTP binding domain QMA0440_RS04005 PF03144 Elongation factor Tu domain 2 QMA0440_RS04005 PF06421 GTP-binding protein LepA C-terminus QMA0440_RS04010 PF10502 Signal peptidase, peptidase S26 QMA0440_RS04015 PF00035 Double-stranded RNA binding motif QMA0440_RS04015 PF14622 Ribonuclease-III-like QMA0440_RS04020 PF01926 50S ribosome-binding GTPase QMA0440_RS04020 PF07650 KH domain QMA0440_RS04025 PF02565 Recombination protein O C terminal QMA0440_RS04025 PF11967 Recombination protein O N terminal QMA0440_RS04030 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ QMA0440_RS04035 PF01648 4'-phosphopantetheinyl transferase superfamily QMA0440_RS04040 PF12838 4Fe-4S dicluster domain QMA0440_RS04045 PF01418 Helix-turn-helix domain, rpiR family QMA0440_RS04045 PF01380 SIS domain QMA0440_RS04050 PF01380 SIS domain QMA0440_RS04055 PF00367 phosphotransferase system, EIIB QMA0440_RS04055 PF02378 Phosphotransferase system, EIIC QMA0440_RS04065 PF14437 MafB19-like deaminase QMA0440_RS04070 PF00497 Bacterial extracellular solute-binding proteins, family 3 QMA0440_RS04070 PF01464 Transglycosylase SLT domain QMA0440_RS04075 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain QMA0440_RS04075 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal QMA0440_RS04075 PF02769 AIR synthase related protein, C-terminal domain QMA0440_RS04085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase QMA0440_RS04085 PF00512 His Kinase A (phospho-acceptor) domain QMA0440_RS04090 PF13942 YfhG lipoprotein QMA0440_RS04095 PF00072 Response regulator receiver domain QMA0440_RS04095 PF00158 Sigma-54 interaction domain QMA0440_RS04100 PF02540 NAD synthase QMA0440_RS04100 PF00795 Carbon-nitrogen hydrolase QMA0440_RS04105 PF00543 Nitrogen regulatory protein P-II QMA0440_RS04110 PF10797 Protein of unknown function QMA0440_RS04115 PF10941 Protein of unknown function DUF2620 QMA0440_RS04120 PF02126 Phosphotriesterase family QMA0440_RS04125 PF01168 Alanine racemase, N-terminal domain QMA0440_RS04135 PF14503 YhfZ C-terminal domain QMA0440_RS04135 PF14502 Helix-turn-helix domain QMA0440_RS04140 PF00175 Oxidoreductase NAD-binding domain QMA0440_RS04140 PF00042 Globin QMA0440_RS04140 PF00970 Oxidoreductase FAD-binding domain QMA0440_RS04145 PF00464 Serine hydroxymethyltransferase QMA0440_RS04150 PF12832 MFS_1 like family QMA0440_RS04155 PF00874 PRD domain QMA0440_RS04160 PF06226 Protein of unknown function (DUF1007) QMA0440_RS04165 PF03824 High-affinity nickel-transport protein QMA0440_RS04170 PF00459 Inositol monophosphatase family QMA0440_RS04175 PF00588 SpoU rRNA Methylase family QMA0440_RS04180 PF02082 Transcriptional regulator QMA0440_RS04185 PF00266 Aminotransferase class-V QMA0440_RS04190 PF01592 NifU-like N terminal domain QMA0440_RS04195 PF01521 Iron-sulphur cluster biosynthesis QMA0440_RS04200 PF07743 HSCB C-terminal oligomerisation domain QMA0440_RS04200 PF00226 DnaJ domain QMA0440_RS04205 PF00012 Hsp70 protein QMA0440_RS04210 PF00111 2Fe-2S iron-sulfur cluster binding domain QMA0440_RS04215 PF04384 Iron-sulphur cluster assembly QMA0440_RS04220 PF12404 Peptidase QMA0440_RS04220 PF00883 Cytosol aminopeptidase family, catalytic domain QMA0440_RS04225 PF07179 SseB protein N-terminal domain QMA0440_RS04225 PF14581 SseB protein C-terminal domain QMA0440_RS04230 PF07703 Alpha-2-macroglobulin bait region domain QMA0440_RS04230 PF11974 Bacterial alpha-2-macroglobulin MG3 domain QMA0440_RS04230 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain QMA0440_RS04230 PF17962 Bacterial macroglobulin domain 6 QMA0440_RS04230 PF00207 Alpha-2-macroglobulin family QMA0440_RS04230 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain QMA0440_RS04230 PF07678 A-macroglobulin TED domain QMA0440_RS04230 PF01835 MG2 domain QMA0440_RS04230 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain QMA0440_RS04235 PF00905 Penicillin binding protein transpeptidase domain QMA0440_RS04235 PF00912 Transglycosylase QMA0440_RS04235 PF06832 Penicillin-Binding Protein C-terminus Family QMA0440_RS04245 PF00334 Nucleoside diphosphate kinase QMA0440_RS04250 PF04055 Radical SAM superfamily QMA0440_RS04260 PF13464 Domain of unknown function (DUF4115) QMA0440_RS04265 PF04551 GcpE protein QMA0440_RS04270 PF13393 Histidyl-tRNA synthetase QMA0440_RS04270 PF03129 Anticodon binding domain QMA0440_RS04275 PF09976 Tetratricopeptide repeat-like domain QMA0440_RS04280 PF13360 PQQ-like domain QMA0440_RS04285 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal QMA0440_RS04285 PF01926 50S ribosome-binding GTPase QMA0440_RS04290 PF07191 zinc-ribbons QMA0440_RS04295 PF02601 Exonuclease VII, large subunit QMA0440_RS04295 PF13742 OB-fold nucleic acid binding domain QMA0440_RS04300 PF00478 IMP dehydrogenase / GMP reductase domain QMA0440_RS04300 PF00571 CBS domain QMA0440_RS04305 PF02540 NAD synthase QMA0440_RS04305 PF00117 Glutamine amidotransferase class-I QMA0440_RS04305 PF00958 GMP synthase C terminal domain QMA0440_RS04315 PF08543 Phosphomethylpyrimidine kinase QMA0440_RS04335 PF00781 Diacylglycerol kinase catalytic domain QMA0440_RS04340 PF01136 Peptidase family U32 QMA0440_RS04340 PF16325 Peptidase family U32 C-terminal domain QMA0440_RS04345 PF07411 Domain of unknown function (DUF1508) QMA0440_RS04350 PF00486 Transcriptional regulatory protein, C terminal QMA0440_RS04350 PF00072 Response regulator receiver domain QMA0440_RS04355 PF00672 HAMP domain QMA0440_RS04355 PF00512 His Kinase A (phospho-acceptor) domain QMA0440_RS04355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase QMA0440_RS04360 PF07690 Major Facilitator Superfamily QMA0440_RS04365 PF00873 AcrB/AcrD/AcrF family QMA0440_RS04370 PF00873 AcrB/AcrD/AcrF family QMA0440_RS04375 PF13533 Biotin-lipoyl like QMA0440_RS04395 PF13953 PapC C-terminal domain QMA0440_RS04395 PF13954 PapC N-terminal domain QMA0440_RS04395 PF00577 Outer membrane usher protein QMA0440_RS04400 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain QMA0440_RS04400 PF02753 Pili assembly chaperone PapD, C-terminal domain QMA0440_RS04410 PF00012 Hsp70 protein QMA0440_RS04415 PF01769 Divalent cation transporter QMA0440_RS04415 PF03448 MgtE intracellular N domain QMA0440_RS04415 PF00571 CBS domain QMA0440_RS04425 PF02541 Ppx/GppA phosphatase family QMA0440_RS04430 PF13089 Polyphosphate kinase N-terminal domain QMA0440_RS04430 PF17941 Polyphosphate kinase C-terminal domain 1 QMA0440_RS04430 PF13090 Polyphosphate kinase C-terminal domain 2 QMA0440_RS04430 PF02503 Polyphosphate kinase middle domain QMA0440_RS04435 PF00528 Binding-protein-dependent transport system inner membrane component QMA0440_RS04440 PF00528 Binding-protein-dependent transport system inner membrane component QMA0440_RS04445 PF00005 ABC transporter QMA0440_RS04450 PF13302 Acetyltransferase (GNAT) domain QMA0440_RS04455 PF00551 Formyl transferase QMA0440_RS04460 PF02769 AIR synthase related protein, C-terminal domain QMA0440_RS04460 PF00586 AIR synthase related protein, N-terminal domain QMA0440_RS04470 PF00860 Permease family QMA0440_RS04475 PF00308 Bacterial dnaA protein QMA0440_RS04480 PF03960 ArsC family QMA0440_RS04485 PF07720 Tetratricopeptide repeat QMA0440_RS04485 PF01435 Peptidase family M48 QMA0440_RS04490 PF01594 AI-2E family transporter QMA0440_RS04495 PF00578 AhpC/TSA family QMA0440_RS04500 PF01842 ACT domain QMA0440_RS04505 PF00701 Dihydrodipicolinate synthetase family QMA0440_RS04510 PF06804 NlpB/DapX lipoprotein QMA0440_RS04515 PF01259 SAICAR synthetase QMA0440_RS04520 PF04284 Protein of unknown function (DUF441) QMA0440_RS04525 PF13718 GNAT acetyltransferase 2 QMA0440_RS04525 PF08351 Domain of unknown function (DUF1726) QMA0440_RS04525 PF05127 Helicase QMA0440_RS04525 PF17176 tRNA-binding domain QMA0440_RS04530 PF02230 Phospholipase/Carboxylesterase QMA0440_RS04535 PF13980 Uncharacterised protein family (UPF0370) QMA0440_RS04540 PF02557 D-alanyl-D-alanine carboxypeptidase QMA0440_RS04545 PF01546 Peptidase family M20/M25/M40 QMA0440_RS04545 PF07687 Peptidase dimerisation domain QMA0440_RS04550 PF03960 ArsC family QMA0440_RS04555 PF01817 Chorismate mutase type II QMA0440_RS04565 PF00873 AcrB/AcrD/AcrF family QMA0440_RS04575 PF00196 Bacterial regulatory proteins, luxR family QMA0440_RS04575 PF00072 Response regulator receiver domain QMA0440_RS04585 PF00037 4Fe-4S binding domain QMA0440_RS04585 PF12800 4Fe-4S binding domain QMA0440_RS04585 PF13187 4Fe-4S dicluster domain QMA0440_RS04590 PF03927 NapD protein QMA0440_RS04595 PF10518 TAT (twin-arginine translocation) pathway signal sequence QMA0440_RS04595 PF04879 Molybdopterin oxidoreductase Fe4S4 domain QMA0440_RS04595 PF00384 Molybdopterin oxidoreductase QMA0440_RS04595 PF01568 Molydopterin dinucleotide binding domain QMA0440_RS04600 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) QMA0440_RS04605 PF03264 NapC/NirT cytochrome c family, N-terminal region QMA0440_RS04610 PF00293 NUDIX domain QMA0440_RS04615 PF00390 Malic enzyme, N-terminal domain QMA0440_RS04615 PF03949 Malic enzyme, NAD binding domain QMA0440_RS04615 PF01515 Phosphate acetyl/butaryl transferase QMA0440_RS04620 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 QMA0440_RS04625 PF01218 Coproporphyrinogen III oxidase QMA0440_RS04635 PF00583 Acetyltransferase (GNAT) family QMA0440_RS04645 PF01434 Peptidase family M41 QMA0440_RS04645 PF00004 ATPase family associated with various cellular activities (AAA) QMA0440_RS04645 PF17862 AAA+ lid domain QMA0440_RS04645 PF06480 FtsH Extracellular QMA0440_RS04685 PF00583 Acetyltransferase (GNAT) family QMA0440_RS04690 PF04076 Bacterial OB fold (BOF) protein QMA0440_RS04695 PF06572 Protein of unknown function (DUF1131) QMA0440_RS04700 PF04261 Dyp-type peroxidase family QMA0440_RS04705 PF00701 Dihydrodipicolinate synthetase family QMA0440_RS04710 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase QMA0440_RS04715 PF00480 ROK family QMA0440_RS04720 PF04074 YhcH/YjgK/YiaL QMA0440_RS04725 PF01380 SIS domain QMA0440_RS04725 PF01418 Helix-turn-helix domain, rpiR family QMA0440_RS04730 PF07690 Major Facilitator Superfamily QMA0440_RS04740 PF00528 Binding-protein-dependent transport system inner membrane component QMA0440_RS04745 PF00528 Binding-protein-dependent transport system inner membrane component QMA0440_RS04750 PF00005 ABC transporter QMA0440_RS04755 PF00291 Pyridoxal-phosphate dependent enzyme QMA0440_RS04760 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 QMA0440_RS04765 PF05524 PEP-utilising enzyme, N-terminal QMA0440_RS04765 PF00391 PEP-utilising enzyme, mobile domain QMA0440_RS04765 PF02896 PEP-utilising enzyme, TIM barrel domain QMA0440_RS04770 PF00381 PTS HPr component phosphorylation site QMA0440_RS04775 PF00291 Pyridoxal-phosphate dependent enzyme QMA0440_RS04785 PF04354 ZipA, C-terminal FtsZ-binding domain QMA0440_RS04790 PF01653 NAD-dependent DNA ligase adenylation domain QMA0440_RS04790 PF03120 NAD-dependent DNA ligase OB-fold domain QMA0440_RS04790 PF03119 NAD-dependent DNA ligase C4 zinc finger domain QMA0440_RS04790 PF12826 Helix-hairpin-helix motif QMA0440_RS04790 PF00533 BRCA1 C Terminus (BRCT) domain QMA0440_RS04795 PF12843 Putative quorum-sensing-regulated virulence factor QMA0440_RS04825 PF00749 tRNA synthetases class I (E and Q), catalytic domain QMA0440_RS04870 PF07662 Na+ dependent nucleoside transporter C-terminus QMA0440_RS04870 PF07670 Nucleoside recognition QMA0440_RS04870 PF01773 Na+ dependent nucleoside transporter N-terminus QMA0440_RS04875 PF01566 Natural resistance-associated macrophage protein QMA0440_RS04885 PF03466 LysR substrate binding domain QMA0440_RS04885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family QMA0440_RS04895 PF02685 Glucokinase QMA0440_RS04900 PF07690 Major Facilitator Superfamily QMA0440_RS04905 PF04397 LytTr DNA-binding domain QMA0440_RS04905 PF00072 Response regulator receiver domain QMA0440_RS04910 PF07694 5TMR of 5TMR-LYT QMA0440_RS04910 PF06580 Histidine kinase QMA0440_RS04910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase QMA0440_RS04915 PF07350 Protein of unknown function (DUF1479) QMA0440_RS04920 PF00155 Aminotransferase class I and II QMA0440_RS04925 PF01292 Prokaryotic cytochrome b561 QMA0440_RS04935 PF13406 Transglycosylase SLT domain QMA0440_RS04940 PF03831 PhnA domain QMA0440_RS04940 PF08274 PhnA Zinc-Ribbon QMA0440_RS04955 PF00005 ABC transporter QMA0440_RS04960 PF03379 CcmB protein QMA0440_RS04965 PF01578 Cytochrome C assembly protein QMA0440_RS04970 PF04995 Heme exporter protein D (CcmD) QMA0440_RS04975 PF03100 CcmE QMA0440_RS04980 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal QMA0440_RS04980 PF01578 Cytochrome C assembly protein QMA0440_RS04985 PF08534 Redoxin QMA0440_RS04990 PF03918 Cytochrome C biogenesis protein QMA0440_RS04995 PF03918 Cytochrome C biogenesis protein QMA0440_RS05000 PF04333 MlaA lipoprotein QMA0440_RS05005 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) QMA0440_RS05010 PF04175 Protein of unknown function (DUF406) QMA0440_RS05015 PF00108 Thiolase, N-terminal domain QMA0440_RS05015 PF02803 Thiolase, C-terminal domain QMA0440_RS05020 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain QMA0440_RS05020 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain QMA0440_RS05020 PF00378 Enoyl-CoA hydratase/isomerase QMA0440_RS05030 PF00300 Histidine phosphatase superfamily (branch 1) QMA0440_RS05035 PF01713 Smr domain QMA0440_RS05040 PF05175 Methyltransferase small domain QMA0440_RS05045 PF01264 Chorismate synthase QMA0440_RS05050 PF03411 Penicillin-insensitive murein endopeptidase QMA0440_RS05055 PF01925 Sulfite exporter TauE/SafE QMA0440_RS05060 PF04315 Elongation factor P hydroxylase QMA0440_RS05065 PF08891 YfcL protein QMA0440_RS05070 PF01266 FAD dependent oxidoreductase QMA0440_RS05070 PF05430 S-adenosyl-L-methionine-dependent methyltransferase QMA0440_RS05075 PF02801 Beta-ketoacyl synthase, C-terminal domain QMA0440_RS05075 PF00109 Beta-ketoacyl synthase, N-terminal domain QMA0440_RS05105 PF00578 AhpC/TSA family QMA0440_RS05110 PF00155 Aminotransferase class I and II QMA0440_RS05130 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain QMA0440_RS05130 PF11890 Domain of unknown function (DUF3410) QMA0440_RS05130 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain QMA0440_RS05135 PF02774 Semialdehyde dehydrogenase, dimerisation domain QMA0440_RS05135 PF01118 Semialdehyde dehydrogenase, NAD binding domain QMA0440_RS05140 PF01416 tRNA pseudouridine synthase QMA0440_RS05145 PF09335 SNARE associated Golgi protein QMA0440_RS05150 PF01039 Carboxyl transferase domain QMA0440_RS05150 PF17848 Acetyl-coA carboxylase zinc finger domain QMA0440_RS05155 PF02875 Mur ligase family, glutamate ligase domain QMA0440_RS05155 PF08245 Mur ligase middle domain QMA0440_RS05160 PF05036 Sporulation related domain QMA0440_RS05165 PF02674 Colicin V production protein QMA0440_RS05170 PF00156 Phosphoribosyl transferase domain QMA0440_RS05175 PF02441 Flavoprotein QMA0440_RS05180 PF00497 Bacterial extracellular solute-binding proteins, family 3 QMA0440_RS05185 PF00528 Binding-protein-dependent transport system inner membrane component QMA0440_RS05190 PF00528 Binding-protein-dependent transport system inner membrane component QMA0440_RS05195 PF00005 ABC transporter QMA0440_RS05200 PF01370 NAD dependent epimerase/dehydratase family QMA0440_RS05200 PF08338 Domain of unknown function (DUF1731) QMA0440_RS05205 PF00043 Glutathione S-transferase, C-terminal domain QMA0440_RS05205 PF02798 Glutathione S-transferase, N-terminal domain QMA0440_RS05215 PF12850 Calcineurin-like phosphoesterase superfamily domain QMA0440_RS05220 PF00293 NUDIX domain QMA0440_RS05225 PF03611 PTS system sugar-specific permease component QMA0440_RS05235 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 QMA0440_RS05240 PF00356 Bacterial regulatory proteins, lacI family QMA0440_RS05240 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family QMA0440_RS05245 PF01515 Phosphate acetyl/butaryl transferase QMA0440_RS05245 PF07085 DRTGG domain QMA0440_RS05250 PF00871 Acetokinase family QMA0440_RS05255 PF04217 Protein of unknown function, DUF412 QMA0440_RS05260 PF03887 YfbU domain QMA0440_RS05270 PF03600 Citrate transporter QMA0440_RS05270 PF02080 TrkA-C domain QMA0440_RS05280 PF00155 Aminotransferase class I and II QMA0440_RS05290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family QMA0440_RS05290 PF03466 LysR substrate binding domain QMA0440_RS05295 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 QMA0440_RS05300 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit QMA0440_RS05305 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit QMA0440_RS05305 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit QMA0440_RS05315 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit QMA0440_RS05315 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region QMA0440_RS05315 PF10531 SLBB domain QMA0440_RS05320 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region QMA0440_RS05320 PF04879 Molybdopterin oxidoreductase Fe4S4 domain QMA0440_RS05320 PF00384 Molybdopterin oxidoreductase QMA0440_RS05320 PF01568 Molydopterin dinucleotide binding domain QMA0440_RS05325 PF00146 NADH dehydrogenase QMA0440_RS05330 PF12838 4Fe-4S dicluster domain QMA0440_RS05335 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 QMA0440_RS05340 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L QMA0440_RS05345 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus QMA0440_RS05345 PF00361 Proton-conducting membrane transporter QMA0440_RS05350 PF00361 Proton-conducting membrane transporter QMA0440_RS05355 PF00361 Proton-conducting membrane transporter QMA0440_RS05360 PF06496 Protein of unknown function (DUF1097) QMA0440_RS05365 PF05957 Bacterial protein of unknown function (DUF883) QMA0440_RS05370 PF00425 chorismate binding enzyme QMA0440_RS05375 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain QMA0440_RS05375 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain QMA0440_RS05375 PF16582 Middle domain of thiamine pyrophosphate QMA0440_RS05380 PF12697 Alpha/beta hydrolase family QMA0440_RS05385 PF00378 Enoyl-CoA hydratase/isomerase QMA0440_RS05390 PF13378 Enolase C-terminal domain-like QMA0440_RS05395 PF13193 AMP-binding enzyme C-terminal domain QMA0440_RS05395 PF00501 AMP-binding enzyme QMA0440_RS05400 PF00199 Catalase QMA0440_RS05400 PF06628 Catalase-related immune-responsive QMA0440_RS05405 PF07437 YfaZ precursor QMA0440_RS05410 PF03222 Tryptophan/tyrosine permease family QMA0440_RS05420 PF00535 Glycosyl transferase family 2 QMA0440_RS05425 PF04138 GtrA-like protein QMA0440_RS05430 PF00994 Probable molybdopterin binding domain QMA0440_RS05435 PF03974 Ecotin QMA0440_RS05445 PF00111 2Fe-2S iron-sulfur cluster binding domain QMA0440_RS05450 PF00268 Ribonucleotide reductase, small chain QMA0440_RS05455 PF00317 Ribonucleotide reductase, all-alpha domain QMA0440_RS05455 PF02867 Ribonucleotide reductase, barrel domain QMA0440_RS05455 PF03477 ATP cone domain QMA0440_RS05465 PF03989 DNA gyrase C-terminal domain, beta-propeller QMA0440_RS05465 PF00521 DNA gyrase/topoisomerase IV, subunit A QMA0440_RS05470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase QMA0440_RS05470 PF00512 His Kinase A (phospho-acceptor) domain QMA0440_RS05470 PF09456 RcsC Alpha-Beta-Loop (ABL) QMA0440_RS05470 PF00072 Response regulator receiver domain QMA0440_RS05475 PF00196 Bacterial regulatory proteins, luxR family QMA0440_RS05475 PF00072 Response regulator receiver domain QMA0440_RS05480 PF16359 RcsD-ABL domain QMA0440_RS05480 PF01627 Hpt domain QMA0440_RS05480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase QMA0440_RS05485 PF07690 Major Facilitator Superfamily QMA0440_RS05490 PF00267 Gram-negative porin QMA0440_RS05505 PF13302 Acetyltransferase (GNAT) domain QMA0440_RS05510 PF00144 Beta-lactamase QMA0440_RS05515 PF12706 Beta-lactamase superfamily domain QMA0440_RS05520 PF06183 DinI-like family QMA0440_RS05540 PF00884 Sulfatase QMA0440_RS05540 PF11893 Domain of unknown function (DUF3413) QMA0440_RS05545 PF07208 Protein of unknown function (DUF1414) QMA0440_RS05550 PF04245 37-kD nucleoid-associated bacterial protein QMA0440_RS05555 PF01386 Ribosomal L25p family QMA0440_RS05560 PF04851 Type III restriction enzyme, res subunit QMA0440_RS05560 PF00271 Helicase conserved C-terminal domain QMA0440_RS05565 PF01479 S4 domain QMA0440_RS05565 PF00849 RNA pseudouridylate synthase QMA0440_RS05570 PF07690 Major Facilitator Superfamily QMA0440_RS05575 PF13989 YejG-like protein QMA0440_RS05580 PF08352 Oligopeptide/dipeptide transporter, C-terminal region QMA0440_RS05580 PF00005 ABC transporter QMA0440_RS05585 PF12911 N-terminal TM domain of oligopeptide transport permease C QMA0440_RS05585 PF00528 Binding-protein-dependent transport system inner membrane component QMA0440_RS05590 PF00528 Binding-protein-dependent transport system inner membrane component QMA0440_RS05595 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle QMA0440_RS05600 PF00563 EAL domain QMA0440_RS05600 PF12792 CSS motif domain associated with EAL QMA0440_RS05605 PF00877 NlpC/P60 family QMA0440_RS05610 PF01569 PAP2 superfamily QMA0440_RS05615 PF07683 Cobalamin synthesis protein cobW C-terminal domain QMA0440_RS05615 PF02492 CobW/HypB/UreG, nucleotide-binding domain QMA0440_RS05625 PF01232 Mannitol dehydrogenase Rossmann domain QMA0440_RS05625 PF08125 Mannitol dehydrogenase C-terminal domain QMA0440_RS05635 PF03786 D-mannonate dehydratase (UxuA) QMA0440_RS05640 PF09285 Elongation factor P, C-terminal QMA0440_RS05640 PF01132 Elongation factor P (EF-P) OB domain QMA0440_RS05640 PF08207 Elongation factor P (EF-P) KOW-like domain QMA0440_RS05645 PF03222 Tryptophan/tyrosine permease family QMA0440_RS05650 PF03692 Putative zinc- or iron-chelating domain QMA0440_RS05655 PF01568 Molydopterin dinucleotide binding domain QMA0440_RS05655 PF18364 Molybdopterin oxidoreductase N-terminal domain QMA0440_RS05655 PF00384 Molybdopterin oxidoreductase QMA0440_RS05660 PF03264 NapC/NirT cytochrome c family, N-terminal region QMA0440_RS05665 PF00293 NUDIX domain QMA0440_RS05670 PF00381 PTS HPr component phosphorylation site QMA0440_RS05670 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 QMA0440_RS05675 PF00294 pfkB family carbohydrate kinase QMA0440_RS05680 PF02378 Phosphotransferase system, EIIC QMA0440_RS05680 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit QMA0440_RS05685 PF01261 Xylose isomerase-like TIM barrel QMA0440_RS05690 PF03601 Conserved hypothetical protein 698 QMA0440_RS05705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family QMA0440_RS05705 PF03466 LysR substrate binding domain QMA0440_RS05710 PF00324 Amino acid permease QMA0440_RS05720 PF01032 FecCD transport family QMA0440_RS05725 PF00005 ABC transporter QMA0440_RS05730 PF07715 TonB-dependent Receptor Plug Domain QMA0440_RS05730 PF00593 TonB dependent receptor QMA0440_RS05740 PF13520 Amino acid permease QMA0440_RS05745 PF00929 Exonuclease QMA0440_RS05745 PF08411 Exonuclease C-terminal QMA0440_RS05755 PF04632 Fusaric acid resistance protein family QMA0440_RS05760 PF04363 Protein of unknown function (DUF496) QMA0440_RS05775 PF00005 ABC transporter QMA0440_RS05775 PF08402 TOBE domain QMA0440_RS05780 PF00528 Binding-protein-dependent transport system inner membrane component QMA0440_RS05790 PF07690 Major Facilitator Superfamily QMA0440_RS05795 PF07730 Histidine kinase QMA0440_RS05795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase QMA0440_RS05795 PF05231 MASE1 QMA0440_RS05800 PF00196 Bacterial regulatory proteins, luxR family QMA0440_RS05800 PF00072 Response regulator receiver domain QMA0440_RS05805 PF12431 Transcriptional regulator QMA0440_RS05805 PF00072 Response regulator receiver domain QMA0440_RS05810 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain QMA0440_RS05810 PF17203 Single cache domain 3 QMA0440_RS05810 PF00989 PAS fold QMA0440_RS05810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase QMA0440_RS05815 PF08218 Citrate lyase ligase C-terminal domain QMA0440_RS05820 PF06857 Malonate decarboxylase delta subunit (MdcD) QMA0440_RS05825 PF03328 HpcH/HpaI aldolase/citrate lyase family QMA0440_RS05830 PF04223 Citrate lyase, alpha subunit (CitF) QMA0440_RS05835 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase QMA0440_RS05840 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase QMA0440_RS05845 PF00939 Sodium:sulfate symporter transmembrane region QMA0440_RS05850 PF17837 4'-phosphopantetheinyl transferase N-terminal domain QMA0440_RS05850 PF01648 4'-phosphopantetheinyl transferase superfamily QMA0440_RS05870 PF06167 Glucose-regulated metallo-peptidase M90 QMA0440_RS05935 PF00717 Peptidase S24-like QMA0440_RS05935 PF01381 Helix-turn-helix QMA0440_RS05965 PF04381 Putative exonuclease, RdgC QMA0440_RS05985 PF07102 Protein of unknown function (DUF1364) QMA0440_RS06015 PF04971 Bacteriophage P21 holin S QMA0440_RS06020 PF00959 Phage lysozyme QMA0440_RS06025 PF03245 Bacteriophage Rz lysis protein QMA0440_RS06085 PF01797 Transposase IS200 like QMA0440_RS06165 PF03526 Colicin E1 (microcin) immunity protein QMA0440_RS06170 PF01024 Colicin pore forming domain QMA0440_RS06210 PF14001 YdfZ protein QMA0440_RS06220 PF10777 Inner membrane protein YlaC QMA0440_RS06225 PF02801 Beta-ketoacyl synthase, C-terminal domain QMA0440_RS06225 PF14765 Polyketide synthase dehydratase QMA0440_RS06225 PF00109 Beta-ketoacyl synthase, N-terminal domain QMA0440_RS06225 PF16197 Ketoacyl-synthetase C-terminal extension QMA0440_RS06225 PF00550 Phosphopantetheine attachment site QMA0440_RS06225 PF08659 KR domain QMA0440_RS06225 PF00107 Zinc-binding dehydrogenase QMA0440_RS06225 PF08240 Alcohol dehydrogenase GroES-like domain QMA0440_RS06225 PF00698 Acyl transferase domain QMA0440_RS06230 PF00703 Glycosyl hydrolases family 2 QMA0440_RS06230 PF02929 Beta galactosidase small chain QMA0440_RS06230 PF02836 Glycosyl hydrolases family 2, TIM barrel domain QMA0440_RS06230 PF16353 Domain of unknown function(DUF4981) QMA0440_RS06230 PF02837 Glycosyl hydrolases family 2, sugar binding domain QMA0440_RS06235 PF00356 Bacterial regulatory proteins, lacI family QMA0440_RS06240 PF00313 'Cold-shock' DNA-binding domain QMA0440_RS06245 PF10781 Dextransucrase DSRB QMA0440_RS06250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain QMA0440_RS06250 PF02203 Tar ligand binding domain homologue QMA0440_RS06250 PF00672 HAMP domain QMA0440_RS06255 PF02308 MgtC family QMA0440_RS06265 PF00582 Universal stress protein family QMA0440_RS06275 PF05247 Flagellar transcriptional activator (FlhD) QMA0440_RS06280 PF05280 Flagellar transcriptional activator (FlhC) QMA0440_RS06285 PF01618 MotA/TolQ/ExbB proton channel family QMA0440_RS06290 PF00691 OmpA family QMA0440_RS06290 PF13677 Membrane MotB of proton-channel complex MotA/MotB QMA0440_RS06295 PF01627 Hpt domain QMA0440_RS06295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase QMA0440_RS06295 PF02895 Signal transducing histidine kinase, homodimeric domain QMA0440_RS06295 PF09078 CheY binding QMA0440_RS06295 PF01584 CheW-like domain QMA0440_RS06300 PF01584 CheW-like domain QMA0440_RS06305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain QMA0440_RS06305 PF00672 HAMP domain QMA0440_RS06305 PF02203 Tar ligand binding domain homologue QMA0440_RS06310 PF00672 HAMP domain QMA0440_RS06310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain QMA0440_RS06310 PF02203 Tar ligand binding domain homologue QMA0440_RS06315 PF03705 CheR methyltransferase, all-alpha domain QMA0440_RS06315 PF01739 CheR methyltransferase, SAM binding domain QMA0440_RS06320 PF01339 CheB methylesterase QMA0440_RS06320 PF00072 Response regulator receiver domain QMA0440_RS06325 PF00072 Response regulator receiver domain QMA0440_RS06330 PF04344 Chemotaxis phosphatase, CheZ QMA0440_RS06360 PF00419 Fimbrial protein QMA0440_RS06370 PF02753 Pili assembly chaperone PapD, C-terminal domain QMA0440_RS06370 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain QMA0440_RS06375 PF00577 Outer membrane usher protein QMA0440_RS06375 PF13953 PapC C-terminal domain QMA0440_RS06375 PF13954 PapC N-terminal domain QMA0440_RS06385 PF00419 Fimbrial protein QMA0440_RS06395 PF00196 Bacterial regulatory proteins, luxR family QMA0440_RS06400 PF00082 Subtilase family QMA0440_RS06400 PF01483 Proprotein convertase P-domain QMA0440_RS06405 PF01312 FlhB HrpN YscU SpaS Family QMA0440_RS06410 PF00771 FHIPEP family QMA0440_RS06415 PF06366 Flagellar protein FlhE QMA0440_RS06425 PF05130 FlgN protein QMA0440_RS06430 PF04316 Anti-sigma-28 factor, FlgM QMA0440_RS06435 PF13144 Chaperone for flagella basal body P-ring formation QMA0440_RS06435 PF17656 FlgA N-terminal domain QMA0440_RS06440 PF00460 Flagella basal body rod protein QMA0440_RS06445 PF00460 Flagella basal body rod protein QMA0440_RS06445 PF06429 Flagellar basal body rod FlgEFG protein C-terminal QMA0440_RS06450 PF13861 FlgD Tudor-like domain QMA0440_RS06450 PF03963 Flagellar hook capping protein - N-terminal region QMA0440_RS06450 PF13860 FlgD Ig-like domain QMA0440_RS06455 PF07559 Flagellar basal body protein FlaE QMA0440_RS06455 PF00460 Flagella basal body rod protein QMA0440_RS06455 PF06429 Flagellar basal body rod FlgEFG protein C-terminal QMA0440_RS06460 PF06429 Flagellar basal body rod FlgEFG protein C-terminal QMA0440_RS06460 PF00460 Flagella basal body rod protein QMA0440_RS06465 PF00460 Flagella basal body rod protein QMA0440_RS06465 PF06429 Flagellar basal body rod FlgEFG protein C-terminal QMA0440_RS06470 PF02107 Flagellar L-ring protein QMA0440_RS06475 PF02119 Flagellar P-ring protein QMA0440_RS06480 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase QMA0440_RS06480 PF10135 Rod binding protein QMA0440_RS06485 PF00460 Flagella basal body rod protein QMA0440_RS06485 PF06429 Flagellar basal body rod FlgEFG protein C-terminal QMA0440_RS06490 PF00669 Bacterial flagellin N-terminal helical region QMA0440_RS06495 PF01311 Bacterial export proteins, family 1 QMA0440_RS06500 PF01313 Bacterial export proteins, family 3 QMA0440_RS06505 PF00813 FliP family QMA0440_RS06510 PF04347 Flagellar biosynthesis protein, FliO QMA0440_RS06515 PF16973 Flagellar motor switch protein FliN N-terminal QMA0440_RS06515 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term QMA0440_RS06520 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term QMA0440_RS06520 PF02154 Flagellar motor switch protein FliM QMA0440_RS06525 PF03748 Flagellar basal body-associated protein FliL QMA0440_RS06530 PF02120 Flagellar hook-length control protein FliK QMA0440_RS06535 PF02050 Flagellar FliJ protein QMA0440_RS06540 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain QMA0440_RS06540 PF18269 T3SS EscN ATPase C-terminal domain QMA0440_RS06545 PF02108 Flagellar assembly protein FliH QMA0440_RS06550 PF14842 FliG N-terminal domain QMA0440_RS06550 PF14841 FliG middle domain QMA0440_RS06550 PF01706 FliG C-terminal domain QMA0440_RS06555 PF08345 Flagellar M-ring protein C-terminal QMA0440_RS06555 PF01514 Secretory protein of YscJ/FliF family QMA0440_RS06560 PF02049 Flagellar hook-basal body complex protein FliE QMA0440_RS06570 PF01223 DNA/RNA non-specific endonuclease QMA0440_RS06575 PF02254 TrkA-N domain QMA0440_RS06575 PF07885 Ion channel QMA0440_RS06580 PF01966 HD domain QMA0440_RS06585 PF12833 Helix-turn-helix domain QMA0440_RS06590 PF05400 Flagellar protein FliT QMA0440_RS06595 PF02561 Flagellar protein FliS QMA0440_RS06600 PF07195 Flagellar hook-associated protein 2 C-terminus QMA0440_RS06600 PF07196 Flagellin hook IN motif QMA0440_RS06600 PF02465 Flagellar hook-associated protein 2 N-terminus QMA0440_RS06605 PF08884 Flagellin D3 domain QMA0440_RS06605 PF00700 Bacterial flagellin C-terminal helical region QMA0440_RS06605 PF00669 Bacterial flagellin N-terminal helical region QMA0440_RS06610 PF00700 Bacterial flagellin C-terminal helical region QMA0440_RS06610 PF08884 Flagellin D3 domain QMA0440_RS06610 PF00669 Bacterial flagellin N-terminal helical region QMA0440_RS06615 PF04542 Sigma-70 region 2 QMA0440_RS06615 PF04539 Sigma-70 region 3 QMA0440_RS06615 PF04545 Sigma-70, region 4 QMA0440_RS06620 PF02899 Phage integrase, N-terminal SAM-like domain QMA0440_RS06625 PF00291 Pyridoxal-phosphate dependent enzyme QMA0440_RS06630 PF00497 Bacterial extracellular solute-binding proteins, family 3 QMA0440_RS06635 PF00528 Binding-protein-dependent transport system inner membrane component QMA0440_RS06640 PF00005 ABC transporter QMA0440_RS06645 PF00171 Aldehyde dehydrogenase family QMA0440_RS06645 PF01619 Proline dehydrogenase QMA0440_RS06645 PF14850 DNA-binding domain of Proline dehydrogenase QMA0440_RS06645 PF18327 Proline utilization A proline dehydrogenase N-terminal domain QMA0440_RS06650 PF00474 Sodium:solute symporter family QMA0440_RS06655 PF18500 CadC C-terminal domain 1 QMA0440_RS06655 PF00486 Transcriptional regulatory protein, C terminal QMA0440_RS06660 PF13520 Amino acid permease QMA0440_RS06665 PF01276 Orn/Lys/Arg decarboxylase, major domain QMA0440_RS06665 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain QMA0440_RS06665 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain QMA0440_RS06670 PF00324 Amino acid permease QMA0440_RS06680 PF00589 Phage integrase family QMA0440_RS06690 PF10769 Protein of unknown function (DUF2594) QMA0440_RS06695 PF00072 Response regulator receiver domain QMA0440_RS06695 PF00196 Bacterial regulatory proteins, luxR family QMA0440_RS06700 PF08459 UvrC Helix-hairpin-helix N-terminal QMA0440_RS06700 PF02151 UvrB/uvrC motif QMA0440_RS06700 PF01541 GIY-YIG catalytic domain QMA0440_RS06705 PF01066 CDP-alcohol phosphatidyltransferase QMA0440_RS06730 PF13333 Integrase core domain QMA0440_RS06730 PF13276 HTH-like domain QMA0440_RS06730 PF00665 Integrase core domain QMA0440_RS06735 PF00672 HAMP domain QMA0440_RS06735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain QMA0440_RS06735 PF02203 Tar ligand binding domain homologue QMA0440_RS06745 PF00005 ABC transporter QMA0440_RS06750 PF00528 Binding-protein-dependent transport system inner membrane component QMA0440_RS06760 PF13442 Cytochrome C oxidase, cbb3-type, subunit III QMA0440_RS06760 PF00034 Cytochrome c QMA0440_RS06775 PF13673 Acetyltransferase (GNAT) domain QMA0440_RS06805 PF04960 Glutaminase QMA0440_RS06810 PF13520 Amino acid permease QMA0440_RS06815 PF00282 Pyridoxal-dependent decarboxylase conserved domain QMA0440_RS06820 PF00849 RNA pseudouridylate synthase QMA0440_RS06835 PF13520 Amino acid permease QMA0440_RS06845 PF03553 Na+/H+ antiporter family QMA0440_RS06850 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) QMA0440_RS06860 PF01479 S4 domain QMA0440_RS06860 PF00849 RNA pseudouridylate synthase QMA0440_RS06870 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit QMA0440_RS06875 PF02378 Phosphotransferase system, EIIC QMA0440_RS06880 PF00232 Glycosyl hydrolase family 1 QMA0440_RS06885 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit QMA0440_RS06890 PF07883 Cupin domain QMA0440_RS06890 PF12833 Helix-turn-helix domain QMA0440_RS06895 PF04794 YdjC-like protein QMA0440_RS06910 PF00313 'Cold-shock' DNA-binding domain QMA0440_RS06915 PF00313 'Cold-shock' DNA-binding domain QMA0440_RS06920 PF08241 Methyltransferase domain QMA0440_RS06935 PF07478 D-ala D-ala ligase C-terminus QMA0440_RS06935 PF01820 D-ala D-ala ligase N-terminus QMA0440_RS06940 PF06411 HdeA/HdeB family QMA0440_RS06950 PF03372 Endonuclease/Exonuclease/phosphatase family QMA0440_RS06955 PF00360 Phytochrome region QMA0440_RS06955 PF00990 Diguanylate cyclase, GGDEF domain QMA0440_RS06955 PF01590 GAF domain QMA0440_RS06955 PF00563 EAL domain QMA0440_RS06965 PF00664 ABC transporter transmembrane region QMA0440_RS06965 PF00005 ABC transporter QMA0440_RS06970 PF13520 Amino acid permease QMA0440_RS06980 PF12833 Helix-turn-helix domain QMA0440_RS06985 PF10964 Protein of unknown function (DUF2766) QMA0440_RS06990 PF13996 YobH-like protein QMA0440_RS06995 PF13998 MgrB protein QMA0440_RS07000 PF13974 YebO-like protein QMA0440_RS07015 PF00324 Amino acid permease QMA0440_RS07020 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP QMA0440_RS07025 PF10736 Protein of unknown function (DUF2627) QMA0440_RS07030 PF00313 'Cold-shock' DNA-binding domain QMA0440_RS07035 PF02578 Multi-copper polyphenol oxidoreductase laccase QMA0440_RS07040 PF00905 Penicillin binding protein transpeptidase domain QMA0440_RS07040 PF03717 Penicillin-binding Protein dimerisation domain QMA0440_RS07045 PF13847 Methyltransferase domain QMA0440_RS07065 PF07690 Major Facilitator Superfamily QMA0440_RS07070 PF00550 Phosphopantetheine attachment site QMA0440_RS07070 PF00501 AMP-binding enzyme QMA0440_RS07070 PF13193 AMP-binding enzyme C-terminal domain QMA0440_RS07070 PF00668 Condensation domain QMA0440_RS07075 PF00732 GMC oxidoreductase QMA0440_RS07075 PF05199 GMC oxidoreductase QMA0440_RS07085 PF02770 Acyl-CoA dehydrogenase, middle domain QMA0440_RS07085 PF00441 Acyl-CoA dehydrogenase, C-terminal domain QMA0440_RS07085 PF02771 Acyl-CoA dehydrogenase, N-terminal domain QMA0440_RS07100 PF02441 Flavoprotein QMA0440_RS07105 PF02659 Putative manganese efflux pump QMA0440_RS07110 PF06173 Protein of unknown function (DUF986) QMA0440_RS07115 PF03613 PTS system mannose/fructose/sorbose family IID component QMA0440_RS07120 PF03609 PTS system sorbose-specific iic component QMA0440_RS07125 PF03830 PTS system sorbose subfamily IIB component QMA0440_RS07125 PF03610 PTS system fructose IIA component QMA0440_RS07130 PF03471 Transporter associated domain QMA0440_RS07130 PF03741 Integral membrane protein TerC family QMA0440_RS07135 PF03313 Serine dehydratase alpha chain QMA0440_RS07135 PF03315 Serine dehydratase beta chain QMA0440_RS07140 PF00293 NUDIX domain QMA0440_RS07145 PF00425 chorismate binding enzyme QMA0440_RS07145 PF04715 Anthranilate synthase component I, N terminal region QMA0440_RS07150 PF03701 Uncharacterised protein family (UPF0181) QMA0440_RS07155 PF02222 ATP-grasp domain QMA0440_RS07160 PF00271 Helicase conserved C-terminal domain QMA0440_RS07160 PF00270 DEAD/DEAH box helicase QMA0440_RS07160 PF03880 DbpA RNA binding domain QMA0440_RS07165 PF07130 YebG protein QMA0440_RS07170 PF04266 ASCH domain QMA0440_RS07175 PF13995 YebF-like protein QMA0440_RS07180 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain QMA0440_RS07180 PF00326 Prolyl oligopeptidase family QMA0440_RS07185 PF00929 Exonuclease QMA0440_RS07190 PF00561 alpha/beta hydrolase fold QMA0440_RS07195 PF06440 DNA polymerase III, theta subunit QMA0440_RS07200 PF00210 Ferritin-like domain QMA0440_RS07205 PF04234 CopC domain QMA0440_RS07210 PF05425 Copper resistance protein D QMA0440_RS07215 PF10709 Protein of unknown function (DUF2511) QMA0440_RS07310 PF01381 Helix-turn-helix QMA0440_RS07310 PF00717 Peptidase S24-like QMA0440_RS07345 PF04381 Putative exonuclease, RdgC QMA0440_RS07355 PF05869 DNA N-6-adenine-methyltransferase (Dam) QMA0440_RS07370 PF07102 Protein of unknown function (DUF1364) QMA0440_RS07400 PF04971 Bacteriophage P21 holin S QMA0440_RS07405 PF00959 Phage lysozyme QMA0440_RS07560 PF00144 Beta-lactamase QMA0440_RS07580 PF10753 Toxin GhoT_OrtT QMA0440_RS07585 PF03783 Curli production assembly/transport component CsgG QMA0440_RS07595 PF05643 Putative bacterial lipoprotein (DUF799) QMA0440_RS07610 PF07351 Protein of unknown function (DUF1480) QMA0440_RS07615 PF00360 Phytochrome region QMA0440_RS07615 PF00990 Diguanylate cyclase, GGDEF domain QMA0440_RS07615 PF00563 EAL domain QMA0440_RS07615 PF01590 GAF domain QMA0440_RS07620 PF02470 MlaD protein QMA0440_RS07625 PF04403 Paraquat-inducible protein A QMA0440_RS07630 PF13185 GAF domain QMA0440_RS07635 PF17516 ProQ C-terminal domain QMA0440_RS07635 PF04352 ProQ/FINO family QMA0440_RS07640 PF03572 Peptidase family S41 QMA0440_RS07640 PF00595 PDZ domain QMA0440_RS07640 PF11818 C-terminal domain of tail specific protease (DUF3340) QMA0440_RS07640 PF17804 Tail specific protease N-terminal domain QMA0440_RS07645 PF01435 Peptidase family M48 QMA0440_RS07650 PF07282 Putative transposase DNA-binding domain QMA0440_RS07650 PF01385 Probable transposase QMA0440_RS07650 PF12323 Helix-turn-helix domain QMA0440_RS07655 PF07690 Major Facilitator Superfamily QMA0440_RS07660 PF01614 Bacterial transcriptional regulator QMA0440_RS07660 PF09339 IclR helix-turn-helix domain QMA0440_RS07665 PF01510 N-acetylmuramoyl-L-alanine amidase QMA0440_RS07670 PF00375 Sodium:dicarboxylate symporter family QMA0440_RS07675 PF04307 LexA-binding, inner membrane-associated putative hydrolase QMA0440_RS07680 PF13419 Haloacid dehalogenase-like hydrolase QMA0440_RS07685 PF14002 YniB-like protein QMA0440_RS07690 PF03881 Fructosamine kinase QMA0440_RS07695 PF00950 ABC 3 transport family QMA0440_RS07700 PF00950 ABC 3 transport family QMA0440_RS07705 PF00005 ABC transporter QMA0440_RS07710 PF01297 Zinc-uptake complex component A periplasmic QMA0440_RS07715 PF01464 Transglycosylase SLT domain QMA0440_RS07720 PF01914 MarC family integral membrane protein QMA0440_RS07755 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain QMA0440_RS07755 PF03129 Anticodon binding domain QMA0440_RS07755 PF02824 TGS domain QMA0440_RS07755 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) QMA0440_RS07760 PF05198 Translation initiation factor IF-3, N-terminal domain QMA0440_RS07760 PF00707 Translation initiation factor IF-3, C-terminal domain QMA0440_RS07765 PF01632 Ribosomal protein L35 QMA0440_RS07770 PF00453 Ribosomal protein L20 QMA0440_RS07775 PF01409 tRNA synthetases class II core domain (F) QMA0440_RS07775 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain QMA0440_RS07780 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain QMA0440_RS07780 PF03484 tRNA synthetase B5 domain QMA0440_RS07780 PF03483 B3/4 domain QMA0440_RS07780 PF01588 Putative tRNA binding domain QMA0440_RS07780 PF03147 Ferredoxin-fold anticodon binding domain QMA0440_RS07785 PF00216 Bacterial DNA-binding protein QMA0440_RS07795 PF04606 Ogr/Delta-like zinc finger QMA0440_RS07830 PF02899 Phage integrase, N-terminal SAM-like domain QMA0440_RS07830 PF00589 Phage integrase family QMA0440_RS07835 PF01032 FecCD transport family QMA0440_RS07840 PF00005 ABC transporter QMA0440_RS07845 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family QMA0440_RS07850 PF00535 Glycosyl transferase family 2 QMA0440_RS07855 PF00551 Formyl transferase QMA0440_RS07855 PF02911 Formyl transferase, C-terminal domain QMA0440_RS07855 PF01370 NAD dependent epimerase/dehydratase family QMA0440_RS07860 PF01522 Polysaccharide deacetylase QMA0440_RS07865 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase QMA0440_RS07870 PF00892 EamA-like transporter family QMA0440_RS07880 PF00877 NlpC/P60 family QMA0440_RS07885 PF10437 Bacterial lipoate protein ligase C-terminus QMA0440_RS07885 PF03099 Biotin/lipoate A/B protein ligase family QMA0440_RS07890 PF02696 Uncharacterized ACR, YdiU/UPF0061 family QMA0440_RS07895 PF00005 ABC transporter QMA0440_RS07900 PF01032 FecCD transport family QMA0440_RS07905 PF01497 Periplasmic binding protein QMA0440_RS07910 PF05171 Haemin-degrading HemS.ChuX domain QMA0440_RS07915 PF07715 TonB-dependent Receptor Plug Domain QMA0440_RS07915 PF00593 TonB dependent receptor QMA0440_RS07920 PF10636 Hemin uptake protein hemP QMA0440_RS07925 PF00793 DAHP synthetase I family QMA0440_RS07930 PF03618 Kinase/pyrophosphorylase QMA0440_RS07935 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain QMA0440_RS07935 PF02896 PEP-utilising enzyme, TIM barrel domain QMA0440_RS07935 PF00391 PEP-utilising enzyme, mobile domain QMA0440_RS07945 PF01594 AI-2E family transporter QMA0440_RS07950 PF13183 4Fe-4S dicluster domain QMA0440_RS07950 PF02913 FAD linked oxidases, C-terminal domain QMA0440_RS07950 PF01565 FAD binding domain QMA0440_RS07955 PF03061 Thioesterase superfamily QMA0440_RS07965 PF01521 Iron-sulphur cluster biosynthesis QMA0440_RS07970 PF01458 Uncharacterized protein family (UPF0051) QMA0440_RS07975 PF00005 ABC transporter QMA0440_RS07980 PF01458 Uncharacterized protein family (UPF0051) QMA0440_RS07985 PF00266 Aminotransferase class-V QMA0440_RS07990 PF02657 Fe-S metabolism associated domain QMA0440_RS07995 PF03734 L,D-transpeptidase catalytic domain QMA0440_RS07995 PF01476 LysM domain QMA0440_RS07995 PF17969 L,D-transpeptidase C-terminal domain QMA0440_RS08000 PF04728 Lipoprotein leucine-zipper QMA0440_RS08005 PF02887 Pyruvate kinase, alpha/beta domain QMA0440_RS08005 PF00224 Pyruvate kinase, barrel domain QMA0440_RS08030 PF01554 MatE QMA0440_RS08035 PF00677 Lumazine binding domain QMA0440_RS08045 PF07690 Major Facilitator Superfamily QMA0440_RS08050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family QMA0440_RS08050 PF03466 LysR substrate binding domain QMA0440_RS08055 PF00356 Bacterial regulatory proteins, lacI family QMA0440_RS08060 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain QMA0440_RS08060 PF02777 Iron/manganese superoxide dismutases, C-terminal domain QMA0440_RS08065 PF00877 NlpC/P60 family QMA0440_RS08070 PF00462 Glutaredoxin QMA0440_RS08075 PF00929 Exonuclease QMA0440_RS08080 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily QMA0440_RS08085 PF00724 NADH:flavin oxidoreductase / NADH oxidase family QMA0440_RS08090 PF16925 Tetracyclin repressor-like, C-terminal domain QMA0440_RS08090 PF00440 Bacterial regulatory proteins, tetR family QMA0440_RS08095 PF08019 Phosphoethanolamine transferase EptA/EptB QMA0440_RS08095 PF00884 Sulfatase QMA0440_RS08100 PF06945 Protein of unknown function (DUF1289) QMA0440_RS08105 PF00248 Aldo/keto reductase family QMA0440_RS08115 PF01047 MarR family QMA0440_RS08120 PF05433 Glycine zipper 2TM domain QMA0440_RS08125 PF03702 Anhydro-N-acetylmuramic acid kinase QMA0440_RS08130 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region QMA0440_RS08130 PF01243 Pyridoxamine 5'-phosphate oxidase QMA0440_RS08135 PF01479 S4 domain QMA0440_RS08135 PF00579 tRNA synthetases class I (W and Y) QMA0440_RS08140 PF08543 Phosphomethylpyrimidine kinase QMA0440_RS08145 PF00043 Glutathione S-transferase, C-terminal domain QMA0440_RS08145 PF02798 Glutathione S-transferase, N-terminal domain QMA0440_RS08150 PF11656 YjbD family (DUF3811) QMA0440_RS08160 PF04893 Yip1 domain QMA0440_RS08170 PF00226 DnaJ domain QMA0440_RS08170 PF01556 DnaJ C terminal domain QMA0440_RS08180 PF00854 POT family QMA0440_RS08190 PF00005 ABC transporter QMA0440_RS08195 PF00005 ABC transporter QMA0440_RS08195 PF08352 Oligopeptide/dipeptide transporter, C-terminal region QMA0440_RS08200 PF00528 Binding-protein-dependent transport system inner membrane component QMA0440_RS08200 PF12911 N-terminal TM domain of oligopeptide transport permease C QMA0440_RS08205 PF00528 Binding-protein-dependent transport system inner membrane component QMA0440_RS08210 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle QMA0440_RS08220 PF02917 Pertussis toxin, subunit 1 QMA0440_RS08230 PF00158 Sigma-54 interaction domain QMA0440_RS08230 PF02954 Bacterial regulatory protein, Fis family QMA0440_RS08235 PF04012 PspA/IM30 family QMA0440_RS08240 PF06667 Phage shock protein B QMA0440_RS08245 PF04024 PspC domain QMA0440_RS08250 PF09584 Phage shock protein PspD (Phageshock_PspD) QMA0440_RS08255 PF04317 YcjX-like family, DUF463 QMA0440_RS08260 PF05128 Domain of unknown function (DUF697) QMA0440_RS08265 PF08808 RES domain QMA0440_RS08270 PF09722 Protein of unknown function (DUF2384) QMA0440_RS08275 PF00158 Sigma-54 interaction domain QMA0440_RS08275 PF18024 Helix-turn-helix domain QMA0440_RS08280 PF08534 Redoxin QMA0440_RS08285 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain QMA0440_RS08285 PF13378 Enolase C-terminal domain-like QMA0440_RS08290 PF00246 Zinc carboxypeptidase QMA0440_RS08295 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle QMA0440_RS08300 PF01544 CorA-like Mg2+ transporter protein QMA0440_RS08305 PF01171 PP-loop family QMA0440_RS08310 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain QMA0440_RS08310 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg QMA0440_RS08310 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase QMA0440_RS08310 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II QMA0440_RS08310 PF10371 Domain of unknown function QMA0440_RS08315 PF00893 Small Multidrug Resistance protein QMA0440_RS08320 PF02308 MgtC family QMA0440_RS08325 PF03891 Domain of unknown function (DUF333) QMA0440_RS08330 PF03724 META domain QMA0440_RS08335 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain QMA0440_RS08335 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain QMA0440_RS08340 PF11739 Dicarboxylate transport QMA0440_RS08350 PF13617 YnbE-like lipoprotein QMA0440_RS08355 PF07027 Protein of unknown function (DUF1318) QMA0440_RS08360 PF02525 Flavodoxin-like fold QMA0440_RS08370 PF11898 Domain of unknown function (DUF3418) QMA0440_RS08370 PF00270 DEAD/DEAH box helicase QMA0440_RS08370 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold QMA0440_RS08370 PF00271 Helicase conserved C-terminal domain QMA0440_RS08370 PF04408 Helicase associated domain (HA2) QMA0440_RS08375 PF00089 Trypsin QMA0440_RS08385 PF01161 Phosphatidylethanolamine-binding protein QMA0440_RS08390 PF12833 Helix-turn-helix domain QMA0440_RS08400 PF00080 Copper/zinc superoxide dismutase (SODC) QMA0440_RS08405 PF00512 His Kinase A (phospho-acceptor) domain QMA0440_RS08405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase QMA0440_RS08405 PF00672 HAMP domain QMA0440_RS08410 PF00072 Response regulator receiver domain QMA0440_RS08410 PF00486 Transcriptional regulatory protein, C terminal QMA0440_RS08420 PF13520 Amino acid permease QMA0440_RS08425 PF07338 Protein of unknown function (DUF1471) QMA0440_RS08430 PF05222 Alanine dehydrogenase/PNT, N-terminal domain QMA0440_RS08430 PF01262 Alanine dehydrogenase/PNT, C-terminal domain QMA0440_RS08430 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch QMA0440_RS08435 PF02233 NAD(P) transhydrogenase beta subunit QMA0440_RS08440 PF01261 Xylose isomerase-like TIM barrel QMA0440_RS08445 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family QMA0440_RS08450 PF00596 Class II Aldolase and Adducin N-terminal domain QMA0440_RS08455 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 QMA0440_RS08460 PF03611 PTS system sugar-specific permease component QMA0440_RS08465 PF00455 DeoR C terminal sensor domain QMA0440_RS08465 PF08220 DeoR-like helix-turn-helix domain QMA0440_RS08475 PF00582 Universal stress protein family QMA0440_RS08480 PF00027 Cyclic nucleotide-binding domain QMA0440_RS08480 PF13545 Crp-like helix-turn-helix domain QMA0440_RS08485 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain QMA0440_RS08485 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain QMA0440_RS08490 PF06445 GyrI-like small molecule binding domain QMA0440_RS08500 PF13419 Haloacid dehalogenase-like hydrolase QMA0440_RS08520 PF00753 Metallo-beta-lactamase superfamily QMA0440_RS08520 PF14863 Alkyl sulfatase dimerisation QMA0440_RS08520 PF14864 Alkyl sulfatase C-terminal QMA0440_RS08550 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus QMA0440_RS08550 PF01048 Phosphorylase superfamily QMA0440_RS08580 PF00106 short chain dehydrogenase QMA0440_RS08585 PF02694 Uncharacterised BCR, YnfA/UPF0060 family QMA0440_RS08590 PF06932 Protein of unknown function (DUF1283) QMA0440_RS08595 PF06649 Protein of unknown function (DUF1161) QMA0440_RS08600 PF00654 Voltage gated chloride channel QMA0440_RS08610 PF00480 ROK family QMA0440_RS08615 PF05472 DNA replication terminus site-binding protein (Ter protein) QMA0440_RS08620 PF00206 Lyase QMA0440_RS08620 PF10415 Fumarase C C-terminus QMA0440_RS08625 PF01238 Phosphomannose isomerase type I QMA0440_RS08630 PF06097 Bacterial protein of unknown function (DUF945) QMA0440_RS08635 PF00962 Adenosine/AMP deaminase QMA0440_RS08640 PF13593 SBF-like CPA transporter family (DUF4137) QMA0440_RS08645 PF02894 Oxidoreductase family, C-terminal alpha/beta domain QMA0440_RS08645 PF01408 Oxidoreductase family, NAD-binding Rossmann fold QMA0440_RS08650 PF09313 Domain of unknown function (DUF1971) QMA0440_RS08650 PF03848 Tellurite resistance protein TehB QMA0440_RS08655 PF01268 Formate--tetrahydrofolate ligase QMA0440_RS08660 PF10754 Protein of unknown function (DUF2569) QMA0440_RS08665 PF02508 Rnf-Nqr subunit, membrane protein QMA0440_RS08670 PF04060 Putative Fe-S cluster QMA0440_RS08675 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit QMA0440_RS08675 PF13237 4Fe-4S dicluster domain QMA0440_RS08675 PF13375 RnfC Barrel sandwich hybrid domain QMA0440_RS08675 PF10531 SLBB domain QMA0440_RS08680 PF12833 Helix-turn-helix domain QMA0440_RS08680 PF06445 GyrI-like small molecule binding domain QMA0440_RS08685 PF03116 NQR2, RnfD, RnfE family QMA0440_RS08690 PF04205 FMN-binding domain QMA0440_RS08695 PF02508 Rnf-Nqr subunit, membrane protein QMA0440_RS08700 PF00730 HhH-GPD superfamily base excision DNA repair protein QMA0440_RS08700 PF10576 Iron-sulfur binding domain of endonuclease III QMA0440_RS08700 PF00633 Helix-hairpin-helix motif QMA0440_RS08705 PF08206 Ribonuclease B OB domain QMA0440_RS08705 PF00773 RNB domain QMA0440_RS08705 PF00575 S1 RNA binding domain QMA0440_RS08710 PF08448 PAS fold QMA0440_RS08710 PF08447 PAS fold QMA0440_RS08710 PF00563 EAL domain QMA0440_RS08710 PF00990 Diguanylate cyclase, GGDEF domain QMA0440_RS08710 PF05231 MASE1 QMA0440_RS08710 PF13426 PAS domain QMA0440_RS08715 PF00923 Transaldolase/Fructose-6-phosphate aldolase QMA0440_RS08720 PF05433 Glycine zipper 2TM domain QMA0440_RS08725 PF01253 Translation initiation factor SUI1 QMA0440_RS08730 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family QMA0440_RS08735 PF07338 Protein of unknown function (DUF1471) QMA0440_RS08745 PF18073 Rubredoxin metal binding domain QMA0440_RS08750 PF06305 Lipopolysaccharide assembly protein A domain QMA0440_RS08755 PF01569 PAP2 superfamily QMA0440_RS08760 PF00925 GTP cyclohydrolase II QMA0440_RS08765 PF00330 Aconitase family (aconitate hydratase) QMA0440_RS08765 PF00694 Aconitase C-terminal domain QMA0440_RS08780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family QMA0440_RS08780 PF03466 LysR substrate binding domain QMA0440_RS08785 PF01396 Topoisomerase DNA binding C4 zinc finger QMA0440_RS08785 PF01751 Toprim domain QMA0440_RS08785 PF01131 DNA topoisomerase QMA0440_RS08785 PF08272 Topoisomerase I zinc-ribbon-like QMA0440_RS08795 PF10692 Protein of unknown function (DUF2498) QMA0440_RS08800 PF01343 Peptidase family S49 QMA0440_RS08800 PF08496 Peptidase family S49 N-terminal QMA0440_RS08805 PF00106 short chain dehydrogenase QMA0440_RS08810 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP QMA0440_RS08815 PF00849 RNA pseudouridylate synthase QMA0440_RS08815 PF01479 S4 domain QMA0440_RS08820 PF01300 Telomere recombination QMA0440_RS08825 PF02811 PHP domain QMA0440_RS08830 PF04715 Anthranilate synthase component I, N terminal region QMA0440_RS08830 PF00425 chorismate binding enzyme QMA0440_RS08835 PF00117 Glutamine amidotransferase class-I QMA0440_RS08840 PF00591 Glycosyl transferase family, a/b domain QMA0440_RS08840 PF02885 Glycosyl transferase family, helical bundle domain QMA0440_RS08845 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase QMA0440_RS08845 PF00218 Indole-3-glycerol phosphate synthase QMA0440_RS08850 PF00291 Pyridoxal-phosphate dependent enzyme QMA0440_RS08855 PF00290 Tryptophan synthase alpha chain QMA0440_RS08865 PF03922 OmpW family QMA0440_RS08870 PF03692 Putative zinc- or iron-chelating domain QMA0440_RS08880 PF00916 Sulfate permease family QMA0440_RS08880 PF01740 STAS domain QMA0440_RS08885 PF04279 Intracellular septation protein A QMA0440_RS08890 PF03061 Thioesterase superfamily QMA0440_RS08895 PF03544 Gram-negative bacterial TonB protein C-terminal QMA0440_RS08915 PF13954 PapC N-terminal domain QMA0440_RS08915 PF00577 Outer membrane usher protein QMA0440_RS08915 PF13953 PapC C-terminal domain QMA0440_RS08920 PF02753 Pili assembly chaperone PapD, C-terminal domain QMA0440_RS08920 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain QMA0440_RS08930 PF00486 Transcriptional regulatory protein, C terminal QMA0440_RS08945 PF03795 YCII-related domain QMA0440_RS08965 PF13091 PLD-like domain QMA0440_RS08965 PF13396 Phospholipase_D-nuclease N-terminal QMA0440_RS08970 PF04269 Protein of unknown function, DUF440 QMA0440_RS08975 PF00005 ABC transporter QMA0440_RS08975 PF08352 Oligopeptide/dipeptide transporter, C-terminal region QMA0440_RS08980 PF08352 Oligopeptide/dipeptide transporter, C-terminal region QMA0440_RS08980 PF00005 ABC transporter QMA0440_RS08985 PF00528 Binding-protein-dependent transport system inner membrane component QMA0440_RS08985 PF12911 N-terminal TM domain of oligopeptide transport permease C QMA0440_RS08990 PF00528 Binding-protein-dependent transport system inner membrane component QMA0440_RS08995 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle QMA0440_RS09000 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle QMA0440_RS09010 PF01914 MarC family integral membrane protein QMA0440_RS09020 PF00465 Iron-containing alcohol dehydrogenase QMA0440_RS09020 PF00171 Aldehyde dehydrogenase family QMA0440_RS09025 PF00265 Thymidine kinase QMA0440_RS09030 PF00816 H-NS histone family QMA0440_RS09035 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain QMA0440_RS09035 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain QMA0440_RS09035 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain QMA0440_RS09040 PF00072 Response regulator receiver domain QMA0440_RS09045 PF01734 Patatin-like phospholipase QMA0440_RS09050 PF02810 SEC-C motif QMA0440_RS09055 PF00551 Formyl transferase QMA0440_RS09055 PF01842 ACT domain QMA0440_RS09085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family QMA0440_RS09085 PF03466 LysR substrate binding domain QMA0440_RS09100 PF03372 Endonuclease/Exonuclease/phosphatase family QMA0440_RS09105 PF00293 NUDIX domain QMA0440_RS09110 PF07383 Protein of unknown function (DUF1496) QMA0440_RS09115 PF01751 Toprim domain QMA0440_RS09115 PF01131 DNA topoisomerase QMA0440_RS09120 PF00586 AIR synthase related protein, N-terminal domain QMA0440_RS09120 PF02769 AIR synthase related protein, C-terminal domain QMA0440_RS09125 PF00881 Nitroreductase family QMA0440_RS09130 PF01343 Peptidase family S49 QMA0440_RS09135 PF00710 Asparaginase, N-terminal QMA0440_RS09135 PF17763 Glutaminase/Asparaginase C-terminal domain QMA0440_RS09140 PF00857 Isochorismatase family QMA0440_RS09145 PF07023 Protein of unknown function (DUF1315) QMA0440_RS09150 PF01641 SelR domain QMA0440_RS09155 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain QMA0440_RS09155 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain QMA0440_RS09160 PF01263 Aldose 1-epimerase QMA0440_RS09165 PF00884 Sulfatase QMA0440_RS09170 PF06629 MltA-interacting protein MipA QMA0440_RS09180 PF06798 PrkA serine protein kinase C-terminal domain QMA0440_RS09180 PF08298 PrkA AAA domain QMA0440_RS09185 PF04285 Protein of unknown function (DUF444) QMA0440_RS09190 PF00205 Thiamine pyrophosphate enzyme, central domain QMA0440_RS09190 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain QMA0440_RS09190 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain QMA0440_RS09195 PF03306 Alpha-acetolactate decarboxylase QMA0440_RS09200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family QMA0440_RS09200 PF03466 LysR substrate binding domain QMA0440_RS09205 PF00563 EAL domain QMA0440_RS09205 PF13426 PAS domain QMA0440_RS09205 PF00990 Diguanylate cyclase, GGDEF domain QMA0440_RS09215 PF07690 Major Facilitator Superfamily QMA0440_RS09220 PF01168 Alanine racemase, N-terminal domain QMA0440_RS09220 PF00842 Alanine racemase, C-terminal domain QMA0440_RS09225 PF01266 FAD dependent oxidoreductase QMA0440_RS09230 PF04293 SpoVR like protein QMA0440_RS09235 PF00392 Bacterial regulatory proteins, gntR family QMA0440_RS09235 PF07840 FadR C-terminal domain QMA0440_RS09240 PF06450 Bacterial Na+/H+ antiporter B (NhaB) QMA0440_RS09245 PF02600 Disulfide bond formation protein DsbB QMA0440_RS09260 PF03692 Putative zinc- or iron-chelating domain QMA0440_RS09265 PF01557 Fumarylacetoacetate (FAA) hydrolase family QMA0440_RS09270 PF05166 YcgL domain QMA0440_RS09275 PF03775 Septum formation inhibitor MinC, C-terminal domain QMA0440_RS09275 PF05209 Septum formation inhibitor MinC, N-terminal domain QMA0440_RS09280 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain QMA0440_RS09285 PF03776 Septum formation topological specificity factor MinE QMA0440_RS09290 PF01612 3'-5' exonuclease QMA0440_RS09290 PF00570 HRDC domain QMA0440_RS09295 PF00501 AMP-binding enzyme QMA0440_RS09295 PF13193 AMP-binding enzyme C-terminal domain QMA0440_RS09300 PF03843 Outer membrane lipoprotein Slp family QMA0440_RS09305 PF00814 Glycoprotease family QMA0440_RS09310 PF04851 Type III restriction enzyme, res subunit QMA0440_RS09310 PF13307 Helicase C-terminal domain QMA0440_RS09315 PF01042 Endoribonuclease L-PSP QMA0440_RS09320 PF00893 Small Multidrug Resistance protein QMA0440_RS09325 PF00893 Small Multidrug Resistance protein QMA0440_RS09330 PF01081 KDPG and KHG aldolase QMA0440_RS09335 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain QMA0440_RS09335 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain QMA0440_RS09340 PF01418 Helix-turn-helix domain, rpiR family QMA0440_RS09340 PF01380 SIS domain QMA0440_RS09345 PF00224 Pyruvate kinase, barrel domain QMA0440_RS09345 PF02887 Pyruvate kinase, alpha/beta domain QMA0440_RS09350 PF03279 Bacterial lipid A biosynthesis acyltransferase QMA0440_RS09355 PF08525 Opacity-associated protein A N-terminal motif QMA0440_RS09355 PF01551 Peptidase family M23 QMA0440_RS09355 PF01476 LysM domain QMA0440_RS09360 PF01297 Zinc-uptake complex component A periplasmic QMA0440_RS09365 PF00005 ABC transporter QMA0440_RS09370 PF00950 ABC 3 transport family QMA0440_RS09375 PF00854 POT family QMA0440_RS09380 PF05496 Holliday junction DNA helicase RuvB P-loop domain QMA0440_RS09380 PF05491 RuvB C-terminal winged helix domain QMA0440_RS09380 PF17864 RuvB AAA lid domain QMA0440_RS09385 PF07499 RuvA, C-terminal domain QMA0440_RS09385 PF01330 RuvA N terminal domain QMA0440_RS09390 PF02075 Crossover junction endodeoxyribonuclease RuvC QMA0440_RS09395 PF01709 Transcriptional regulator QMA0440_RS09400 PF00293 NUDIX domain QMA0440_RS09405 PF01336 OB-fold nucleic acid binding domain QMA0440_RS09405 PF00152 tRNA synthetases class II (D, K and N) QMA0440_RS09405 PF02938 GAD domain QMA0440_RS09415 PF01904 Protein of unknown function DUF72 QMA0440_RS09420 PF01124 MAPEG family QMA0440_RS09425 PF13649 Methyltransferase domain QMA0440_RS09430 PF08003 Protein of unknown function (DUF1698) QMA0440_RS09435 PF03932 CutC family QMA0440_RS09440 PF06185 YecM protein QMA0440_RS09445 PF05746 DALR anticodon binding domain QMA0440_RS09445 PF03485 Arginyl tRNA synthetase N terminal domain QMA0440_RS09445 PF00750 tRNA synthetases class I (R) QMA0440_RS09455 PF05860 haemagglutination activity domain QMA0440_RS09455 PF13332 Hemagglutinin repeat QMA0440_RS09460 PF17287 POTRA domain QMA0440_RS09460 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB QMA0440_RS09460 PF08479 POTRA domain, ShlB-type QMA0440_RS09465 PF03023 Lipid II flippase MurJ QMA0440_RS09470 PF01408 Oxidoreductase family, NAD-binding Rossmann fold QMA0440_RS09475 PF04337 Protein of unknown function, DUF480 QMA0440_RS09480 PF13302 Acetyltransferase (GNAT) domain QMA0440_RS09485 PF07690 Major Facilitator Superfamily QMA0440_RS09495 PF07273 Protein of unknown function (DUF1439) QMA0440_RS09500 PF02613 Nitrate reductase delta subunit QMA0440_RS09505 PF02811 PHP domain QMA0440_RS09510 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain QMA0440_RS09515 PF00854 POT family QMA0440_RS09525 PF03009 Glycerophosphoryl diester phosphodiesterase family QMA0440_RS09535 PF00990 Diguanylate cyclase, GGDEF domain QMA0440_RS09540 PF00916 Sulfate permease family QMA0440_RS09540 PF01740 STAS domain QMA0440_RS09545 PF00793 DAHP synthetase I family QMA0440_RS09550 PF13369 Transglutaminase-like superfamily QMA0440_RS09555 PF04247 Invasion gene expression up-regulator, SirB QMA0440_RS09560 PF13847 Methyltransferase domain QMA0440_RS09560 PF17827 PrmC N-terminal domain QMA0440_RS09565 PF00472 RF-1 domain QMA0440_RS09565 PF03462 PCRF domain QMA0440_RS09570 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain QMA0440_RS09570 PF01488 Shikimate / quinate 5-dehydrogenase QMA0440_RS09570 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain QMA0440_RS09575 PF03550 Outer membrane lipoprotein LolB QMA0440_RS09580 PF00288 GHMP kinases N terminal domain QMA0440_RS09580 PF08544 GHMP kinases C terminal QMA0440_RS09585 PF14572 Phosphoribosyl synthetase-associated domain QMA0440_RS09585 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase QMA0440_RS09590 PF10762 Protein of unknown function (DUF2583) QMA0440_RS09595 PF01195 Peptidyl-tRNA hydrolase QMA0440_RS09605 PF06071 Protein of unknown function (DUF933) QMA0440_RS09605 PF01926 50S ribosome-binding GTPase QMA0440_RS09625 PF02753 Pili assembly chaperone PapD, C-terminal domain QMA0440_RS09625 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain QMA0440_RS09630 PF13954 PapC N-terminal domain QMA0440_RS09630 PF00577 Outer membrane usher protein QMA0440_RS09640 PF00158 Sigma-54 interaction domain QMA0440_RS09640 PF01590 GAF domain QMA0440_RS09640 PF02954 Bacterial regulatory protein, Fis family QMA0440_RS09645 PF00586 AIR synthase related protein, N-terminal domain QMA0440_RS09645 PF02769 AIR synthase related protein, C-terminal domain QMA0440_RS09650 PF01924 Hydrogenase formation hypA family QMA0440_RS09655 PF01455 HupF/HypC family QMA0440_RS09660 PF02492 CobW/HypB/UreG, nucleotide-binding domain QMA0440_RS09665 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA QMA0440_RS09670 PF11046 Transcriptional repressor of hyc and hyp operons QMA0440_RS09675 PF13247 4Fe-4S dicluster domain QMA0440_RS09680 PF00361 Proton-conducting membrane transporter QMA0440_RS09685 PF00146 NADH dehydrogenase QMA0440_RS09690 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit QMA0440_RS09690 PF00374 Nickel-dependent hydrogenase QMA0440_RS09690 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit QMA0440_RS09695 PF12838 4Fe-4S dicluster domain QMA0440_RS09700 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit QMA0440_RS09705 PF07450 Formate hydrogenlyase maturation protein HycH QMA0440_RS09710 PF01750 Hydrogenase maturation protease QMA0440_RS09715 PF13247 4Fe-4S dicluster domain QMA0440_RS09715 PF12800 4Fe-4S binding domain QMA0440_RS09720 PF01568 Molydopterin dinucleotide binding domain QMA0440_RS09720 PF00384 Molybdopterin oxidoreductase QMA0440_RS09720 PF04879 Molybdopterin oxidoreductase Fe4S4 domain QMA0440_RS09725 PF07503 HypF finger QMA0440_RS09725 PF01300 Telomere recombination QMA0440_RS09725 PF17788 HypF Kae1-like domain QMA0440_RS09725 PF00708 Acylphosphatase QMA0440_RS09730 PF03824 High-affinity nickel-transport protein QMA0440_RS09740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family QMA0440_RS09740 PF03466 LysR substrate binding domain QMA0440_RS09745 PF05962 HutD QMA0440_RS09750 PF01979 Amidohydrolase family QMA0440_RS09755 PF00392 Bacterial regulatory proteins, gntR family QMA0440_RS09755 PF07702 UTRA domain QMA0440_RS09760 PF01979 Amidohydrolase family QMA0440_RS09770 PF00267 Gram-negative porin QMA0440_RS09775 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family QMA0440_RS09780 PF04996 Succinylarginine dihydrolase QMA0440_RS09785 PF00171 Aldehyde dehydrogenase family QMA0440_RS09790 PF04958 Arginine N-succinyltransferase beta subunit QMA0440_RS09795 PF00202 Aminotransferase class-III QMA0440_RS09800 PF00155 Aminotransferase class I and II QMA0440_RS09800 PF00392 Bacterial regulatory proteins, gntR family QMA0440_RS09805 PF01654 Cytochrome bd terminal oxidase subunit I QMA0440_RS09810 PF02322 Cytochrome bd terminal oxidase subunit II QMA0440_RS09820 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term QMA0440_RS09820 PF00672 HAMP domain QMA0440_RS09820 PF07730 Histidine kinase QMA0440_RS09820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase QMA0440_RS09825 PF08021 Siderophore-interacting FAD-binding domain QMA0440_RS09825 PF04954 Siderophore-interacting protein QMA0440_RS09830 PF01699 Sodium/calcium exchanger protein QMA0440_RS09835 PF02562 PhoH-like protein QMA0440_RS09840 PF12833 Helix-turn-helix domain QMA0440_RS09840 PF02311 AraC-like ligand binding domain QMA0440_RS09855 PF02321 Outer membrane efflux protein QMA0440_RS09860 PF00529 HlyD membrane-fusion protein of T1SS QMA0440_RS09865 PF00005 ABC transporter QMA0440_RS09865 PF00664 ABC transporter transmembrane region QMA0440_RS09870 PF02974 Protease inhibitor Inh QMA0440_RS09875 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) QMA0440_RS09875 PF08548 Peptidase M10 serralysin C terminal QMA0440_RS09875 PF00413 Matrixin QMA0440_RS09880 PF00939 Sodium:sulfate symporter transmembrane region QMA0440_RS09885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase QMA0440_RS09885 PF00989 PAS fold QMA0440_RS09885 PF17203 Single cache domain 3 QMA0440_RS09885 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain QMA0440_RS09890 PF00072 Response regulator receiver domain QMA0440_RS09895 PF03390 2-hydroxycarboxylate transporter family QMA0440_RS09900 PF12323 Helix-turn-helix domain QMA0440_RS09900 PF01385 Probable transposase QMA0440_RS09900 PF07282 Putative transposase DNA-binding domain QMA0440_RS09905 PF01797 Transposase IS200 like QMA0440_RS09910 PF03390 2-hydroxycarboxylate transporter family QMA0440_RS09915 PF02203 Tar ligand binding domain homologue QMA0440_RS09915 PF00672 HAMP domain QMA0440_RS09915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain QMA0440_RS09920 PF01432 Peptidase family M3 QMA0440_RS09925 PF00232 Glycosyl hydrolase family 1 QMA0440_RS09930 PF00765 Autoinducer synthase QMA0440_RS09935 PF03472 Autoinducer binding domain QMA0440_RS09935 PF00196 Bacterial regulatory proteins, luxR family QMA0440_RS09945 PF00180 Isocitrate/isopropylmalate dehydrogenase QMA0440_RS09990 PF01580 FtsK/SpoIIIE family QMA0440_RS09990 PF17854 FtsK alpha domain QMA0440_RS09990 PF09397 Ftsk gamma domain QMA0440_RS09990 PF13491 4TM region of DNA translocase FtsK/SpoIIIE QMA0440_RS10075 PF03354 Phage Terminase QMA0440_RS10090 PF09669 Phage regulatory protein Rha (Phage_pRha) QMA0440_RS10090 PF10549 ORF11CD3 domain QMA0440_RS10105 PF00182 Chitinase class I QMA0440_RS10120 PF00561 alpha/beta hydrolase fold QMA0440_RS10125 PF01555 DNA methylase QMA0440_RS10135 PF06147 Protein of unknown function (DUF968) QMA0440_RS10155 PF05063 MT-A70 QMA0440_RS10160 PF03354 Phage Terminase QMA0440_RS10185 PF01381 Helix-turn-helix QMA0440_RS10185 PF00717 Peptidase S24-like QMA0440_RS10210 PF10065 Uncharacterized conserved protein (DUF2303) QMA0440_RS10230 PF07825 Excisionase-like protein QMA0440_RS10235 PF00589 Phage integrase family QMA0440_RS10235 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain QMA0440_RS10240 PF00180 Isocitrate/isopropylmalate dehydrogenase QMA0440_RS10245 PF00849 RNA pseudouridylate synthase QMA0440_RS10250 PF00293 NUDIX domain QMA0440_RS10260 PF04356 Protein of unknown function (DUF489) QMA0440_RS10265 PF00206 Lyase QMA0440_RS10265 PF08328 Adenylosuccinate lyase C-terminal QMA0440_RS10275 PF00486 Transcriptional regulatory protein, C terminal QMA0440_RS10275 PF00072 Response regulator receiver domain QMA0440_RS10280 PF08918 PhoQ Sensor QMA0440_RS10280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase QMA0440_RS10285 PF08007 Cupin superfamily protein QMA0440_RS10290 PF01546 Peptidase family M20/M25/M40 QMA0440_RS10290 PF07687 Peptidase dimerisation domain QMA0440_RS10295 PF02146 Sir2 family QMA0440_RS10300 PF00480 ROK family QMA0440_RS10305 PF12704 MacB-like periplasmic core domain QMA0440_RS10305 PF02687 FtsX-like permease family QMA0440_RS10310 PF00005 ABC transporter QMA0440_RS10315 PF12704 MacB-like periplasmic core domain QMA0440_RS10315 PF02687 FtsX-like permease family QMA0440_RS10325 PF02559 CarD-like/TRCF domain QMA0440_RS10325 PF00270 DEAD/DEAH box helicase QMA0440_RS10325 PF00271 Helicase conserved C-terminal domain QMA0440_RS10325 PF17757 UvrB interaction domain QMA0440_RS10325 PF03461 TRCF domain QMA0440_RS10330 PF05433 Glycine zipper 2TM domain QMA0440_RS10335 PF07992 Pyridine nucleotide-disulphide oxidoreductase QMA0440_RS10340 PF05728 Uncharacterised protein family (UPF0227) QMA0440_RS10345 PF00933 Glycosyl hydrolase family 3 N terminal domain QMA0440_RS10350 PF01636 Phosphotransferase enzyme family QMA0440_RS10355 PF13036 Peptidoglycan-synthase activator LpoB QMA0440_RS10355 PF08139 Prokaryotic membrane lipoprotein lipid attachment site QMA0440_RS10360 PF07233 Protein of unknown function (DUF1425) QMA0440_RS10365 PF01230 HIT domain QMA0440_RS10370 PF02378 Phosphotransferase system, EIIC QMA0440_RS10370 PF00367 phosphotransferase system, EIIB QMA0440_RS10375 PF01026 TatD related DNase QMA0440_RS10380 PF09115 DNA polymerase III, delta subunit, C terminal QMA0440_RS10385 PF02223 Thymidylate kinase QMA0440_RS10390 PF02618 YceG-like family QMA0440_RS10395 PF01063 Amino-transferase class IV QMA0440_RS10400 PF02801 Beta-ketoacyl synthase, C-terminal domain QMA0440_RS10400 PF00109 Beta-ketoacyl synthase, N-terminal domain QMA0440_RS10405 PF00550 Phosphopantetheine attachment site QMA0440_RS10415 PF00698 Acyl transferase domain QMA0440_RS10420 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal QMA0440_RS10420 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III QMA0440_RS10425 PF02504 Fatty acid synthesis protein QMA0440_RS10430 PF01783 Ribosomal L32p protein family QMA0440_RS10435 PF02620 Large ribosomal RNA subunit accumulation protein YceD QMA0440_RS10440 PF02545 Maf-like protein QMA0440_RS10445 PF00849 RNA pseudouridylate synthase QMA0440_RS10445 PF01479 S4 domain QMA0440_RS10455 PF00575 S1 RNA binding domain QMA0440_RS10455 PF12111 Polyribonucleotide phosphorylase C terminal QMA0440_RS10455 PF10150 Ribonuclease E/G family QMA0440_RS10465 PF03992 Antibiotic biosynthesis monooxygenase QMA0440_RS10470 PF01979 Amidohydrolase family QMA0440_RS10475 PF06183 DinI-like family QMA0440_RS10480 PF13991 BssS protein family QMA0440_RS10485 PF01266 FAD dependent oxidoreductase QMA0440_RS10490 PF00072 Response regulator receiver domain QMA0440_RS10490 PF00196 Bacterial regulatory proteins, luxR family QMA0440_RS10495 PF01594 AI-2E family transporter QMA0440_RS10500 PF17773 UPF0176 acylphosphatase like domain QMA0440_RS10500 PF12368 Rhodanase C-terminal QMA0440_RS10500 PF00581 Rhodanese-like domain QMA0440_RS10505 PF03279 Bacterial lipid A biosynthesis acyltransferase QMA0440_RS10515 PF00854 POT family QMA0440_RS10525 PF00535 Glycosyl transferase family 2 QMA0440_RS10530 PF04349 Periplasmic glucan biosynthesis protein, MdoG QMA0440_RS10535 PF01757 Acyltransferase family QMA0440_RS10545 PF03471 Transporter associated domain QMA0440_RS10545 PF00999 Sodium/hydrogen exchanger family QMA0440_RS10545 PF02080 TrkA-C domain QMA0440_RS10550 PF00484 Carbonic anhydrase QMA0440_RS10560 PF04358 DsrC like protein QMA0440_RS10565 PF00708 Acylphosphatase QMA0440_RS10570 PF10672 S-adenosylmethionine-dependent methyltransferase QMA0440_RS10570 PF17785 PUA-like domain QMA0440_RS10575 PF08755 Hemimethylated DNA-binding protein YccV like QMA0440_RS10580 PF13380 CoA binding domain QMA0440_RS10585 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) QMA0440_RS10590 PF02142 MGS-like domain QMA0440_RS10595 PF13361 UvrD-like helicase C-terminal domain QMA0440_RS10595 PF00580 UvrD/REP helicase N-terminal domain QMA0440_RS10595 PF12462 DNA helicase IV / RNA helicase N terminal QMA0440_RS10600 PF03733 Inner membrane component domain QMA0440_RS10605 PF12805 FUSC-like inner membrane protein yccS QMA0440_RS10610 PF04994 TfoX C-terminal domain QMA0440_RS10610 PF04993 TfoX N-terminal domain QMA0440_RS10615 PF03846 Cell division inhibitor SulA QMA0440_RS10620 PF01389 OmpA-like transmembrane domain QMA0440_RS10620 PF00691 OmpA family QMA0440_RS10625 PF17414 MatP C-terminal ribbon-helix-helix domain QMA0440_RS10625 PF06303 MatP N-terminal domain QMA0440_RS10630 PF05362 Lon protease (S16) C-terminal proteolytic domain QMA0440_RS10630 PF13654 AAA domain QMA0440_RS10635 PF07977 FabA-like domain QMA0440_RS10640 PF04957 Ribosome modulation factor QMA0440_RS10645 PF03886 ABC-type transport auxiliary lipoprotein component QMA0440_RS10650 PF02470 MlaD protein QMA0440_RS10655 PF04403 Paraquat-inducible protein A QMA0440_RS10660 PF12848 ABC transporter QMA0440_RS10660 PF16326 ABC transporter C-terminal domain QMA0440_RS10660 PF00005 ABC transporter QMA0440_RS10665 PF01170 Putative RNA methylase family UPF0020 QMA0440_RS10665 PF02926 THUMP domain QMA0440_RS10665 PF10672 S-adenosylmethionine-dependent methyltransferase QMA0440_RS10670 PF03476 MOSC N-terminal beta barrel domain QMA0440_RS10670 PF00111 2Fe-2S iron-sulfur cluster binding domain QMA0440_RS10670 PF03473 MOSC domain QMA0440_RS10675 PF07126 Cell-division protein ZapC QMA0440_RS10680 PF01180 Dihydroorotate dehydrogenase QMA0440_RS10685 PF17432 Domain of unknown function (DUF3458_C) ARM repeats QMA0440_RS10685 PF01433 Peptidase family M1 domain QMA0440_RS10685 PF11940 Domain of unknown function (DUF3458) Ig-like fold QMA0440_RS10690 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family QMA0440_RS10690 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain QMA0440_RS10695 PF01336 OB-fold nucleic acid binding domain QMA0440_RS10695 PF00152 tRNA synthetases class II (D, K and N) QMA0440_RS10700 PF00267 Gram-negative porin QMA0440_RS10705 PF00155 Aminotransferase class I and II QMA0440_RS10715 PF00753 Metallo-beta-lactamase superfamily QMA0440_RS10720 PF05951 Bacterial protein of unknown function (DUF882) QMA0440_RS10725 PF03734 L,D-transpeptidase catalytic domain QMA0440_RS10725 PF01471 Putative peptidoglycan binding domain QMA0440_RS10730 PF16330 MukB hinge domain QMA0440_RS10730 PF04310 MukB N-terminal QMA0440_RS10735 PF04288 MukE-like family QMA0440_RS10740 PF17193 MukF C-terminal domain QMA0440_RS10740 PF03882 MukF winged-helix domain QMA0440_RS10740 PF17192 MukF middle domain QMA0440_RS10745 PF13847 Methyltransferase domain QMA0440_RS10750 PF02698 DUF218 domain QMA0440_RS10755 PF01636 Phosphotransferase enzyme family QMA0440_RS10760 PF02348 Cytidylyltransferase QMA0440_RS10765 PF03966 Trm112p-like protein QMA0440_RS10770 PF00313 'Cold-shock' DNA-binding domain QMA0440_RS10775 PF00313 'Cold-shock' DNA-binding domain QMA0440_RS10780 PF07063 Domain of unknown function (DUF1338) QMA0440_RS10785 PF02606 Tetraacyldisaccharide-1-P 4'-kinase QMA0440_RS10790 PF00664 ABC transporter transmembrane region QMA0440_RS10790 PF00005 ABC transporter QMA0440_RS10795 PF03772 Competence protein QMA0440_RS10795 PF00753 Metallo-beta-lactamase superfamily QMA0440_RS10800 PF00216 Bacterial DNA-binding protein QMA0440_RS10805 PF00575 S1 RNA binding domain QMA0440_RS10810 PF02224 Cytidylate kinase QMA0440_RS10815 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) QMA0440_RS10820 PF00266 Aminotransferase class-V QMA0440_RS10825 PF00710 Asparaginase, N-terminal QMA0440_RS10825 PF17763 Glutaminase/Asparaginase C-terminal domain QMA0440_RS10830 PF18381 YcaO cyclodehydratase C-terminal domain QMA0440_RS10830 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding QMA0440_RS10835 PF01226 Formate/nitrite transporter QMA0440_RS10840 PF01228 Glycine radical QMA0440_RS10840 PF02901 Pyruvate formate lyase-like QMA0440_RS10845 PF04055 Radical SAM superfamily QMA0440_RS10850 PF07690 Major Facilitator Superfamily QMA0440_RS10855 PF02403 Seryl-tRNA synthetase N-terminal domain QMA0440_RS10855 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) QMA0440_RS10860 PF12002 MgsA AAA+ ATPase C terminal QMA0440_RS10860 PF16193 AAA C-terminal domain QMA0440_RS10860 PF00004 ATPase family associated with various cellular activities (AAA) QMA0440_RS10865 PF03548 Outer membrane lipoprotein carrier protein LolA QMA0440_RS10870 PF01580 FtsK/SpoIIIE family QMA0440_RS10870 PF09397 Ftsk gamma domain QMA0440_RS10870 PF17854 FtsK alpha domain QMA0440_RS10870 PF13491 4TM region of DNA translocase FtsK/SpoIIIE QMA0440_RS10875 PF01037 Lrp/AsnC ligand binding domain QMA0440_RS10880 PF07992 Pyridine nucleotide-disulphide oxidoreductase QMA0440_RS10885 PF00664 ABC transporter transmembrane region QMA0440_RS10885 PF00005 ABC transporter QMA0440_RS10890 PF00664 ABC transporter transmembrane region QMA0440_RS10890 PF00005 ABC transporter QMA0440_RS10895 PF03588 Leucyl/phenylalanyl-tRNA protein transferase QMA0440_RS10900 PF01176 Translation initiation factor 1A / IF-1 QMA0440_RS10905 PF10431 C-terminal, D2-small domain, of ClpB protein QMA0440_RS10905 PF02861 Clp amino terminal domain, pathogenicity island component QMA0440_RS10905 PF07724 AAA domain (Cdc48 subfamily) QMA0440_RS10905 PF17871 AAA lid domain QMA0440_RS10905 PF00004 ATPase family associated with various cellular activities (AAA) QMA0440_RS10910 PF02617 ATP-dependent Clp protease adaptor protein ClpS QMA0440_RS10915 PF00313 'Cold-shock' DNA-binding domain QMA0440_RS10920 PF02687 FtsX-like permease family QMA0440_RS10920 PF00005 ABC transporter QMA0440_RS10920 PF12704 MacB-like periplasmic core domain QMA0440_RS10925 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion QMA0440_RS10930 PF04393 Protein of unknown function (DUF535) QMA0440_RS10935 PF11398 Protein of unknown function (DUF2813) QMA0440_RS10940 PF03956 Lysine exporter LysO QMA0440_RS10945 PF03063 Prismane/CO dehydrogenase family QMA0440_RS10950 PF00970 Oxidoreductase FAD-binding domain QMA0440_RS10950 PF00111 2Fe-2S iron-sulfur cluster binding domain QMA0440_RS10950 PF00175 Oxidoreductase NAD-binding domain QMA0440_RS10955 PF01212 Beta-eliminating lyase QMA0440_RS10960 PF11066 Protein of unknown function (DUF2867) QMA0440_RS10960 PF13460 NAD(P)H-binding QMA0440_RS10965 PF01370 NAD dependent epimerase/dehydratase family QMA0440_RS10970 PF01906 Putative heavy-metal-binding QMA0440_RS10975 PF12883 Protein of unknown function (DUF3828) QMA0440_RS10980 PF00005 ABC transporter QMA0440_RS10985 PF00497 Bacterial extracellular solute-binding proteins, family 3 QMA0440_RS10990 PF00528 Binding-protein-dependent transport system inner membrane component QMA0440_RS10995 PF00528 Binding-protein-dependent transport system inner membrane component QMA0440_RS11000 PF00497 Bacterial extracellular solute-binding proteins, family 3 QMA0440_RS11005 PF05958 tRNA (Uracil-5-)-methyltransferase QMA0440_RS11010 PF10767 Protein of unknown function (DUF2593) QMA0440_RS11015 PF00528 Binding-protein-dependent transport system inner membrane component QMA0440_RS11020 PF00528 Binding-protein-dependent transport system inner membrane component QMA0440_RS11025 PF00005 ABC transporter QMA0440_RS11025 PF08402 TOBE domain QMA0440_RS11030 PF13416 Bacterial extracellular solute-binding protein QMA0440_RS11035 PF10722 Putative bacterial sensory transduction regulator QMA0440_RS11040 PF07214 Protein of unknown function (DUF1418) QMA0440_RS11045 PF00462 Glutaredoxin QMA0440_RS11050 PF02080 TrkA-C domain QMA0440_RS11050 PF06826 Predicted Permease Membrane Region QMA0440_RS11060 PF01569 PAP2 superfamily QMA0440_RS11065 PF01791 DeoC/LacD family aldolase QMA0440_RS11070 PF08220 DeoR-like helix-turn-helix domain QMA0440_RS11070 PF00455 DeoR C terminal sensor domain QMA0440_RS11080 PF03315 Serine dehydratase beta chain QMA0440_RS11080 PF03313 Serine dehydratase alpha chain QMA0440_RS11085 PF07943 Penicillin-binding protein 5, C-terminal domain QMA0440_RS11085 PF00768 D-alanyl-D-alanine carboxypeptidase QMA0440_RS11090 PF00571 CBS domain QMA0440_RS11090 PF00291 Pyridoxal-phosphate dependent enzyme QMA0440_RS11095 PF01053 Cys/Met metabolism PLP-dependent enzyme QMA0440_RS11110 PF00043 Glutathione S-transferase, C-terminal domain QMA0440_RS11110 PF13417 Glutathione S-transferase, N-terminal domain QMA0440_RS11115 PF01370 NAD dependent epimerase/dehydratase family QMA0440_RS11120 PF01634 ATP phosphoribosyltransferase QMA0440_RS11120 PF08029 HisG, C-terminal domain QMA0440_RS11125 PF00815 Histidinol dehydrogenase QMA0440_RS11130 PF00155 Aminotransferase class I and II QMA0440_RS11135 PF00475 Imidazoleglycerol-phosphate dehydratase QMA0440_RS11140 PF00117 Glutamine amidotransferase class-I QMA0440_RS11145 PF00977 Histidine biosynthesis protein QMA0440_RS11150 PF00977 Histidine biosynthesis protein QMA0440_RS11155 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase QMA0440_RS11155 PF01502 Phosphoribosyl-AMP cyclohydrolase QMA0440_RS11160 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase QMA0440_RS11160 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain QMA0440_RS11165 PF00483 Nucleotidyl transferase QMA0440_RS11170 PF00483 Nucleotidyl transferase QMA0440_RS11175 PF03741 Integral membrane protein TerC family QMA0440_RS11175 PF03471 Transporter associated domain QMA0440_RS11175 PF00571 CBS domain QMA0440_RS11180 PF03606 C4-dicarboxylate anaerobic carrier QMA0440_RS11185 PF05170 AsmA family QMA0440_RS11190 PF00692 dUTPase QMA0440_RS11195 PF00485 Phosphoribulokinase / Uridine kinase family QMA0440_RS11200 PF10609 NUBPL iron-transfer P-loop NTPase QMA0440_RS11205 PF09334 tRNA synthetases class I (M) QMA0440_RS11205 PF01588 Putative tRNA binding domain QMA0440_RS11215 PF03788 LrgA family QMA0440_RS11220 PF04172 LrgB-like family QMA0440_RS11225 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region QMA0440_RS11225 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region QMA0440_RS11230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family QMA0440_RS11230 PF03466 LysR substrate binding domain QMA0440_RS11235 PF01797 Transposase IS200 like QMA0440_RS11240 PF07282 Putative transposase DNA-binding domain QMA0440_RS11240 PF01385 Probable transposase QMA0440_RS11240 PF12323 Helix-turn-helix domain QMA0440_RS11250 PF03949 Malic enzyme, NAD binding domain QMA0440_RS11250 PF00390 Malic enzyme, N-terminal domain QMA0440_RS11255 PF02698 DUF218 domain QMA0440_RS11260 PF02653 Branched-chain amino acid transport system / permease component QMA0440_RS11265 PF00005 ABC transporter QMA0440_RS11270 PF13407 Periplasmic binding protein domain QMA0440_RS11275 PF00356 Bacterial regulatory proteins, lacI family QMA0440_RS11280 PF04235 Protein of unknown function (DUF418) QMA0440_RS11285 PF01227 GTP cyclohydrolase I QMA0440_RS11290 PF06779 Uncharacterised MFS-type transporter YbfB QMA0440_RS11295 PF03466 LysR substrate binding domain QMA0440_RS11295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family QMA0440_RS11300 PF00107 Zinc-binding dehydrogenase QMA0440_RS11300 PF08240 Alcohol dehydrogenase GroES-like domain QMA0440_RS11305 PF00756 Putative esterase QMA0440_RS11315 PF03453 MoeA N-terminal region (domain I and II) QMA0440_RS11315 PF00994 Probable molybdopterin binding domain QMA0440_RS11315 PF03454 MoeA C-terminal region (domain IV) QMA0440_RS11320 PF00899 ThiF family QMA0440_RS11325 PF00005 ABC transporter QMA0440_RS11325 PF12848 ABC transporter QMA0440_RS11330 PF01545 Cation efflux family QMA0440_RS11330 PF16916 Dimerisation domain of Zinc Transporter QMA0440_RS11340 PF00571 CBS domain QMA0440_RS11340 PF03448 MgtE intracellular N domain QMA0440_RS11340 PF01769 Divalent cation transporter QMA0440_RS11345 PF13505 Outer membrane protein beta-barrel domain QMA0440_RS11350 PF00892 EamA-like transporter family QMA0440_RS11355 PF13649 Methyltransferase domain QMA0440_RS11360 PF00210 Ferritin-like domain QMA0440_RS11365 PF00497 Bacterial extracellular solute-binding proteins, family 3 QMA0440_RS11370 PF00528 Binding-protein-dependent transport system inner membrane component QMA0440_RS11375 PF00005 ABC transporter QMA0440_RS11380 PF05971 RNA methyltransferase QMA0440_RS11385 PF02885 Glycosyl transferase family, helical bundle domain QMA0440_RS11390 PF13307 Helicase C-terminal domain QMA0440_RS11390 PF06733 DEAD_2 QMA0440_RS11395 PF00267 Gram-negative porin QMA0440_RS11400 PF00892 EamA-like transporter family QMA0440_RS11410 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain QMA0440_RS11410 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain QMA0440_RS11410 PF01276 Orn/Lys/Arg decarboxylase, major domain QMA0440_RS11415 PF13520 Amino acid permease QMA0440_RS11420 PF00528 Binding-protein-dependent transport system inner membrane component QMA0440_RS11425 PF00005 ABC transporter QMA0440_RS11430 PF00528 Binding-protein-dependent transport system inner membrane component QMA0440_RS11435 PF04069 Substrate binding domain of ABC-type glycine betaine transport system QMA0440_RS11440 PF00581 Rhodanese-like domain QMA0440_RS11445 PF07308 Protein of unknown function (DUF1456) QMA0440_RS11450 PF00528 Binding-protein-dependent transport system inner membrane component QMA0440_RS11455 PF00528 Binding-protein-dependent transport system inner membrane component QMA0440_RS11465 PF00005 ABC transporter QMA0440_RS11470 PF04226 Transglycosylase associated protein QMA0440_RS11480 PF01844 HNH endonuclease QMA0440_RS11485 PF01928 CYTH domain QMA0440_RS11490 PF09330 D-lactate dehydrogenase, membrane binding QMA0440_RS11490 PF01565 FAD binding domain QMA0440_RS11495 PF00768 D-alanyl-D-alanine carboxypeptidase QMA0440_RS11505 PF01207 Dihydrouridine synthase (Dus) QMA0440_RS11510 PF00271 Helicase conserved C-terminal domain QMA0440_RS11510 PF00270 DEAD/DEAH box helicase QMA0440_RS11515 PF09209 Tetracyclin repressor-like, C-terminal domain QMA0440_RS11515 PF00440 Bacterial regulatory proteins, tetR family QMA0440_RS11520 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion QMA0440_RS11525 PF00005 ABC transporter QMA0440_RS11540 PF01027 Inhibitor of apoptosis-promoting Bax1 QMA0440_RS11545 PF02391 MoaE protein QMA0440_RS11550 PF02597 ThiS family QMA0440_RS11555 PF01967 MoaC family QMA0440_RS11560 PF06463 Molybdenum Cofactor Synthesis C QMA0440_RS11560 PF04055 Radical SAM superfamily QMA0440_RS11565 PF01933 Uncharacterised protein family UPF0052 QMA0440_RS11570 PF00005 ABC transporter QMA0440_RS11575 PF01032 FecCD transport family QMA0440_RS11590 PF09905 DNA-binding protein VF530 QMA0440_RS11595 PF17757 UvrB interaction domain QMA0440_RS11595 PF02151 UvrB/uvrC motif QMA0440_RS11595 PF04851 Type III restriction enzyme, res subunit QMA0440_RS11595 PF12344 Ultra-violet resistance protein B QMA0440_RS11595 PF00271 Helicase conserved C-terminal domain QMA0440_RS11600 PF00005 ABC transporter QMA0440_RS11610 PF08241 Methyltransferase domain QMA0440_RS11615 PF00155 Aminotransferase class I and II QMA0440_RS11620 PF04055 Radical SAM superfamily QMA0440_RS11620 PF06968 Biotin and Thiamin Synthesis associated domain QMA0440_RS11625 PF00202 Aminotransferase class-III QMA0440_RS11630 PF10282 Lactonase, 7-bladed beta-propeller QMA0440_RS11640 PF03459 TOBE domain QMA0440_RS11640 PF00005 ABC transporter QMA0440_RS11645 PF00528 Binding-protein-dependent transport system inner membrane component QMA0440_RS11655 PF10766 Multidrug efflux pump-associated protein AcrZ QMA0440_RS11660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family QMA0440_RS11660 PF03459 TOBE domain QMA0440_RS11670 PF16363 GDP-mannose 4,6 dehydratase QMA0440_RS11675 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain QMA0440_RS11675 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain QMA0440_RS11680 PF08544 GHMP kinases C terminal QMA0440_RS11680 PF10509 Galactokinase galactose-binding signature QMA0440_RS11680 PF00288 GHMP kinases N terminal domain QMA0440_RS11685 PF01263 Aldose 1-epimerase QMA0440_RS11695 PF00300 Histidine phosphatase superfamily (branch 1) QMA0440_RS11700 PF00793 DAHP synthetase I family QMA0440_RS11705 PF00072 Response regulator receiver domain QMA0440_RS11705 PF00196 Bacterial regulatory proteins, luxR family QMA0440_RS11710 PF00989 PAS fold QMA0440_RS11710 PF01627 Hpt domain QMA0440_RS11710 PF00512 His Kinase A (phospho-acceptor) domain QMA0440_RS11710 PF00497 Bacterial extracellular solute-binding proteins, family 3 QMA0440_RS11710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase QMA0440_RS11710 PF00072 Response regulator receiver domain QMA0440_RS11715 PF04973 Nicotinamide mononucleotide transporter QMA0440_RS11720 PF02445 Quinolinate synthetase A protein QMA0440_RS11760 PF13174 Tetratricopeptide repeat QMA0440_RS11760 PF16331 TolA binding protein trimerisation QMA0440_RS11765 PF00691 OmpA family QMA0440_RS11770 PF07676 WD40-like Beta Propeller Repeat QMA0440_RS11770 PF04052 TolB amino-terminal domain QMA0440_RS11775 PF06519 TolA C-terminal QMA0440_RS11775 PF06519 TolA C-terminal QMA0440_RS11780 PF02472 Biopolymer transport protein ExbD/TolR QMA0440_RS11785 PF01618 MotA/TolQ/ExbB proton channel family QMA0440_RS11790 PF03061 Thioesterase superfamily QMA0440_RS11795 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) QMA0440_RS11800 PF08173 Membrane bound YbgT-like protein QMA0440_RS11805 PF02322 Cytochrome bd terminal oxidase subunit II QMA0440_RS11810 PF01654 Cytochrome bd terminal oxidase subunit I QMA0440_RS11815 PF00149 Calcineurin-like phosphoesterase QMA0440_RS11815 PF02872 5'-nucleotidase, C-terminal domain QMA0440_RS11820 PF00549 CoA-ligase QMA0440_RS11820 PF02629 CoA binding domain QMA0440_RS11825 PF08442 ATP-grasp domain QMA0440_RS11825 PF00549 CoA-ligase QMA0440_RS11830 PF00364 Biotin-requiring enzyme QMA0440_RS11830 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) QMA0440_RS11830 PF02817 e3 binding domain QMA0440_RS11835 PF02779 Transketolase, pyrimidine binding domain QMA0440_RS11835 PF00676 Dehydrogenase E1 component QMA0440_RS11835 PF16078 2-oxoglutarate dehydrogenase N-terminus QMA0440_RS11835 PF16870 2-oxoglutarate dehydrogenase C-terminal QMA0440_RS11840 PF13085 2Fe-2S iron-sulfur cluster binding domain QMA0440_RS11845 PF02910 Fumarate reductase flavoprotein C-term QMA0440_RS11845 PF00890 FAD binding domain QMA0440_RS11850 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit QMA0440_RS11855 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit QMA0440_RS11860 PF00285 Citrate synthase, C-terminal domain QMA0440_RS11870 PF01470 Pyroglutamyl peptidase QMA0440_RS11885 PF03746 LamB/YcsF family QMA0440_RS11890 PF02626 Carboxyltransferase domain, subdomain A and B QMA0440_RS11895 PF02682 Carboxyltransferase domain, subdomain C and D QMA0440_RS11900 PF01784 NIF3 (NGG1p interacting factor 3) QMA0440_RS11905 PF02112 cAMP phosphodiesterases class-II QMA0440_RS11910 PF00875 DNA photolyase QMA0440_RS11910 PF03441 FAD binding domain of DNA photolyase QMA0440_RS11915 PF08349 Protein of unknown function (DUF1722) QMA0440_RS11920 PF10725 Protein of unknown function (DUF2517) QMA0440_RS11925 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) QMA0440_RS11930 PF03814 Potassium-transporting ATPase A subunit QMA0440_RS11940 PF02669 K+-transporting ATPase, c chain QMA0440_RS11945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase QMA0440_RS11945 PF02702 Osmosensitive K+ channel His kinase sensor domain QMA0440_RS11945 PF00512 His Kinase A (phospho-acceptor) domain QMA0440_RS11945 PF13493 Domain of unknown function (DUF4118) QMA0440_RS11945 PF13492 GAF domain QMA0440_RS11950 PF00486 Transcriptional regulatory protein, C terminal QMA0440_RS11950 PF00072 Response regulator receiver domain QMA0440_RS11960 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II QMA0440_RS11960 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain QMA0440_RS11960 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I QMA0440_RS11960 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III QMA0440_RS11965 PF17206 SeqA protein N-terminal domain QMA0440_RS11965 PF03925 SeqA protein C-terminal domain QMA0440_RS11970 PF12697 Alpha/beta hydrolase family QMA0440_RS11975 PF01402 Ribbon-helix-helix protein, copG family QMA0440_RS11980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain QMA0440_RS11980 PF02203 Tar ligand binding domain homologue QMA0440_RS11980 PF00672 HAMP domain QMA0440_RS11985 PF00258 Flavodoxin QMA0440_RS11990 PF01475 Ferric uptake regulator family QMA0440_RS11995 PF01797 Transposase IS200 like QMA0440_RS12000 PF01385 Probable transposase QMA0440_RS12000 PF07282 Putative transposase DNA-binding domain QMA0440_RS12000 PF12323 Helix-turn-helix domain QMA0440_RS12005 PF02838 Glycosyl hydrolase family 20, domain 2 QMA0440_RS12005 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain QMA0440_RS12005 PF00728 Glycosyl hydrolase family 20, catalytic domain QMA0440_RS12005 PF03173 Putative carbohydrate binding domain QMA0440_RS12010 PF13982 YbfN-like lipoprotein QMA0440_RS12015 PF03573 outer membrane porin, OprD family QMA0440_RS12020 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain QMA0440_RS12020 PF00749 tRNA synthetases class I (E and Q), catalytic domain QMA0440_RS12025 PF00367 phosphotransferase system, EIIB QMA0440_RS12025 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 QMA0440_RS12025 PF02378 Phosphotransferase system, EIIC QMA0440_RS12030 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase QMA0440_RS12035 PF01979 Amidohydrolase family QMA0440_RS12040 PF00480 ROK family QMA0440_RS12040 PF01047 MarR family QMA0440_RS12045 PF13344 Haloacid dehalogenase-like hydrolase QMA0440_RS12050 PF13537 Glutamine amidotransferase domain QMA0440_RS12050 PF00733 Asparagine synthase QMA0440_RS12085 PF01494 FAD binding domain QMA0440_RS12090 PF00919 Uncharacterized protein family UPF0004 QMA0440_RS12090 PF01938 TRAM domain QMA0440_RS12090 PF04055 Radical SAM superfamily QMA0440_RS12095 PF02562 PhoH-like protein QMA0440_RS12100 PF02130 Uncharacterized protein family UPF0054 QMA0440_RS12105 PF00571 CBS domain QMA0440_RS12105 PF03471 Transporter associated domain QMA0440_RS12110 PF00795 Carbon-nitrogen hydrolase QMA0440_RS12120 PF00497 Bacterial extracellular solute-binding proteins, family 3 QMA0440_RS12125 PF00528 Binding-protein-dependent transport system inner membrane component QMA0440_RS12130 PF00528 Binding-protein-dependent transport system inner membrane component QMA0440_RS12135 PF00005 ABC transporter QMA0440_RS12140 PF07295 Zinc-ribbon containing domain QMA0440_RS12145 PF00133 tRNA synthetases class I (I, L, M and V) QMA0440_RS12145 PF08264 Anticodon-binding domain of tRNA QMA0440_RS12145 PF13603 Leucyl-tRNA synthetase, Domain 2 QMA0440_RS12150 PF04390 Lipopolysaccharide-assembly QMA0440_RS12155 PF06144 DNA polymerase III, delta subunit QMA0440_RS12155 PF14840 Processivity clamp loader gamma complex DNA pol III C-term QMA0440_RS12160 PF01467 Cytidylyltransferase-like QMA0440_RS12165 PF02413 Caudovirales tail fibre assembly protein, lambda gpK QMA0440_RS12170 PF07484 Phage Tail Collar Domain QMA0440_RS12170 PF03335 Phage tail fibre repeat QMA0440_RS12170 PF08400 Prophage tail fibre N-terminal QMA0440_RS12180 PF04865 Baseplate J-like protein QMA0440_RS12225 PF17482 Phage tail sheath C-terminal domain QMA0440_RS12225 PF04984 Phage tail sheath protein subtilisin-like domain QMA0440_RS12275 PF01343 Peptidase family S49 QMA0440_RS12330 PF00182 Chitinase class I QMA0440_RS12385 PF06992 Replication protein P QMA0440_RS12485 PF00589 Phage integrase family QMA0440_RS12485 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain QMA0440_RS12490 PF02413 Caudovirales tail fibre assembly protein, lambda gpK QMA0440_RS12495 PF08400 Prophage tail fibre N-terminal QMA0440_RS12495 PF03335 Phage tail fibre repeat QMA0440_RS12495 PF07484 Phage Tail Collar Domain QMA0440_RS12505 PF04865 Baseplate J-like protein QMA0440_RS12550 PF04984 Phage tail sheath protein subtilisin-like domain QMA0440_RS12550 PF17482 Phage tail sheath C-terminal domain QMA0440_RS12590 PF01343 Peptidase family S49 QMA0440_RS12645 PF00182 Chitinase class I QMA0440_RS12700 PF00772 DnaB-like helicase N terminal domain QMA0440_RS12700 PF03796 DnaB-like helicase C terminal domain QMA0440_RS12720 PF00717 Peptidase S24-like QMA0440_RS12720 PF01381 Helix-turn-helix QMA0440_RS12815 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain QMA0440_RS12815 PF00589 Phage integrase family QMA0440_RS12825 PF02590 Predicted SPOUT methyltransferase QMA0440_RS12830 PF03717 Penicillin-binding Protein dimerisation domain QMA0440_RS12830 PF00905 Penicillin binding protein transpeptidase domain QMA0440_RS12835 PF01098 Cell cycle protein QMA0440_RS12840 PF05036 Sporulation related domain QMA0440_RS12840 PF03330 Lytic transglycolase QMA0440_RS12845 PF00768 D-alanyl-D-alanine carboxypeptidase QMA0440_RS12845 PF07943 Penicillin-binding protein 5, C-terminal domain QMA0440_RS12850 PF04359 Protein of unknown function (DUF493) QMA0440_RS12855 PF03099 Biotin/lipoate A/B protein ligase family QMA0440_RS12860 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family QMA0440_RS12860 PF04055 Radical SAM superfamily QMA0440_RS12865 PF02416 mttA/Hcf106 family QMA0440_RS12870 PF05230 MASE2 domain QMA0440_RS12870 PF00990 Diguanylate cyclase, GGDEF domain QMA0440_RS12880 PF02537 CrcB-like protein, Camphor Resistance (CrcB) QMA0440_RS12885 PF00313 'Cold-shock' DNA-binding domain QMA0440_RS12890 PF00313 'Cold-shock' DNA-binding domain QMA0440_RS12895 PF00196 Bacterial regulatory proteins, luxR family QMA0440_RS12920 PF00440 Bacterial regulatory proteins, tetR family QMA0440_RS12925 PF00990 Diguanylate cyclase, GGDEF domain QMA0440_RS12925 PF00072 Response regulator receiver domain QMA0440_RS12930 PF00672 HAMP domain QMA0440_RS12930 PF01627 Hpt domain QMA0440_RS12930 PF00072 Response regulator receiver domain QMA0440_RS12930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase QMA0440_RS12930 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) QMA0440_RS12930 PF00512 His Kinase A (phospho-acceptor) domain QMA0440_RS12935 PF02836 Glycosyl hydrolases family 2, TIM barrel domain QMA0440_RS12935 PF02837 Glycosyl hydrolases family 2, sugar binding domain QMA0440_RS12935 PF16355 Domain of unknown function (DUF4982) QMA0440_RS12935 PF00703 Glycosyl hydrolases family 2 QMA0440_RS12955 PF03552 Cellulose synthase QMA0440_RS12955 PF07238 PilZ domain QMA0440_RS12955 PF00535 Glycosyl transferase family 2 QMA0440_RS12965 PF00483 Nucleotidyl transferase QMA0440_RS12975 PF00486 Transcriptional regulatory protein, C terminal QMA0440_RS12975 PF00072 Response regulator receiver domain QMA0440_RS12985 PF00343 Carbohydrate phosphorylase QMA0440_RS12995 PF01292 Prokaryotic cytochrome b561 QMA0440_RS13020 PF00501 AMP-binding enzyme QMA0440_RS13030 PF03960 ArsC family QMA0440_RS13035 PF02040 Arsenical pump membrane protein QMA0440_RS13040 PF01022 Bacterial regulatory protein, arsR family QMA0440_RS13050 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain QMA0440_RS13050 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain QMA0440_RS13085 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain QMA0440_RS13085 PF02753 Pili assembly chaperone PapD, C-terminal domain QMA0440_RS13090 PF13954 PapC N-terminal domain QMA0440_RS13090 PF13953 PapC C-terminal domain QMA0440_RS13090 PF00577 Outer membrane usher protein QMA0440_RS13095 PF00419 Fimbrial protein QMA0440_RS13110 PF09190 DALR domain QMA0440_RS13110 PF01406 tRNA synthetases class I (C) catalytic domain QMA0440_RS13115 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD QMA0440_RS13120 PF00149 Calcineurin-like phosphoesterase QMA0440_RS13125 PF00731 AIR carboxylase QMA0440_RS13130 PF02222 ATP-grasp domain QMA0440_RS13130 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain QMA0440_RS13140 PF00005 ABC transporter QMA0440_RS13145 PF13472 GDSL-like Lipase/Acylhydrolase family QMA0440_RS13150 PF00106 short chain dehydrogenase QMA0440_RS13155 PF00085 Thioredoxin QMA0440_RS13160 PF01145 SPFH domain / Band 7 family QMA0440_RS13160 PF16200 C-terminal region of band_7 QMA0440_RS13165 PF01957 NfeD-like C-terminal, partner-binding QMA0440_RS13170 PF13411 MerR HTH family regulatory protein QMA0440_RS13175 PF00403 Heavy-metal-associated domain QMA0440_RS13180 PF01963 TraB family QMA0440_RS13185 PF04073 Aminoacyl-tRNA editing domain QMA0440_RS13190 PF00149 Calcineurin-like phosphoesterase QMA0440_RS13190 PF02872 5'-nucleotidase, C-terminal domain QMA0440_RS13195 PF02254 TrkA-N domain QMA0440_RS13195 PF00999 Sodium/hydrogen exchanger family QMA0440_RS13200 PF00294 pfkB family carbohydrate kinase QMA0440_RS13205 PF02706 Chain length determinant protein QMA0440_RS13210 PF00762 Ferrochelatase QMA0440_RS13215 PF05191 Adenylate kinase, active site lid QMA0440_RS13220 PF00183 Hsp90 protein QMA0440_RS13220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase QMA0440_RS13225 PF02132 RecR protein QMA0440_RS13225 PF13662 Toprim domain QMA0440_RS13230 PF02575 YbaB/EbfC DNA-binding family QMA0440_RS13235 PF12170 DNA polymerase III tau subunit V interacting with alpha QMA0440_RS13235 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding QMA0440_RS13235 PF12169 DNA polymerase III subunits gamma and tau domain III QMA0440_RS13240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase QMA0440_RS13240 PF00512 His Kinase A (phospho-acceptor) domain QMA0440_RS13245 PF00072 Response regulator receiver domain QMA0440_RS13245 PF00486 Transcriptional regulatory protein, C terminal QMA0440_RS13260 PF01970 Tripartite tricarboxylate transporter TctA family QMA0440_RS13265 PF00156 Phosphoribosyl transferase domain QMA0440_RS13270 PF04304 Protein of unknown function (DUF454) QMA0440_RS13280 PF10689 Protein of unknown function (DUF2496) QMA0440_RS13285 PF00924 Mechanosensitive ion channel QMA0440_RS13285 PF12795 Mechanosensitive ion channel porin domain QMA0440_RS13285 PF12794 Mechanosensitive ion channel inner membrane domain 1 QMA0440_RS13290 PF02635 DsrE/DsrF-like family QMA0440_RS13295 PF08361 MAATS-type transcriptional repressor, C-terminal region QMA0440_RS13295 PF00440 Bacterial regulatory proteins, tetR family QMA0440_RS13300 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion QMA0440_RS13300 PF00529 HlyD membrane-fusion protein of T1SS QMA0440_RS13305 PF00873 AcrB/AcrD/AcrF family QMA0440_RS13310 PF01197 Ribosomal protein L31 QMA0440_RS13315 PF00444 Ribosomal protein L36 QMA0440_RS13325 PF10757 Biofilm formation regulator YbaJ QMA0440_RS13330 PF05321 Haemolysin expression modulating protein QMA0440_RS13340 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain QMA0440_RS13350 PF00909 Ammonium Transporter Family QMA0440_RS13355 PF00543 Nitrogen regulatory protein P-II QMA0440_RS13360 PF00005 ABC transporter QMA0440_RS13360 PF00664 ABC transporter transmembrane region QMA0440_RS13365 PF00005 ABC transporter QMA0440_RS13365 PF00664 ABC transporter transmembrane region QMA0440_RS13370 PF13404 AsnC-type helix-turn-helix domain QMA0440_RS13370 PF01037 Lrp/AsnC ligand binding domain QMA0440_RS13385 PF12793 Sugar transport-related sRNA regulator N-term QMA0440_RS13385 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle QMA0440_RS13390 PF06508 Queuosine biosynthesis protein QueC QMA0440_RS13405 PF13145 PPIC-type PPIASE domain QMA0440_RS13410 PF00216 Bacterial DNA-binding protein QMA0440_RS13415 PF05362 Lon protease (S16) C-terminal proteolytic domain QMA0440_RS13415 PF00004 ATPase family associated with various cellular activities (AAA) QMA0440_RS13415 PF02190 ATP-dependent protease La (LON) substrate-binding domain QMA0440_RS13420 PF06689 ClpX C4-type zinc finger QMA0440_RS13420 PF07724 AAA domain (Cdc48 subfamily) QMA0440_RS13420 PF10431 C-terminal, D2-small domain, of ClpB protein QMA0440_RS13425 PF00574 Clp protease QMA0440_RS13430 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase QMA0440_RS13430 PF05698 Bacterial trigger factor protein (TF) C-terminus QMA0440_RS13430 PF05697 Bacterial trigger factor protein (TF) QMA0440_RS13440 PF01722 BolA-like protein QMA0440_RS13445 PF03923 Uncharacterized lipoprotein QMA0440_RS13445 PF08139 Prokaryotic membrane lipoprotein lipid attachment site QMA0440_RS13450 PF07690 Major Facilitator Superfamily QMA0440_RS13455 PF03502 Nucleoside-specific channel-forming protein, Tsx QMA0440_RS13460 PF00116 Cytochrome C oxidase subunit II, periplasmic domain QMA0440_RS13460 PF06481 COX Aromatic Rich Motif QMA0440_RS13465 PF00115 Cytochrome C and Quinol oxidase polypeptide I QMA0440_RS13470 PF00510 Cytochrome c oxidase subunit III QMA0440_RS13475 PF03626 Prokaryotic Cytochrome C oxidase subunit IV QMA0440_RS13480 PF01040 UbiA prenyltransferase family QMA0440_RS13485 PF07690 Major Facilitator Superfamily QMA0440_RS13490 PF04461 Protein of unknown function (DUF520) QMA0440_RS13495 PF02558 Ketopantoate reductase PanE/ApbA QMA0440_RS13495 PF08546 Ketopantoate reductase PanE/ApbA C terminal QMA0440_RS13500 PF01965 DJ-1/PfpI family QMA0440_RS13505 PF07690 Major Facilitator Superfamily QMA0440_RS13515 PF00672 HAMP domain QMA0440_RS13515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase QMA0440_RS13515 PF00512 His Kinase A (phospho-acceptor) domain QMA0440_RS13520 PF02954 Bacterial regulatory protein, Fis family QMA0440_RS13520 PF00072 Response regulator receiver domain QMA0440_RS13520 PF14532 Sigma-54 interaction domain QMA0440_RS13525 PF02926 THUMP domain QMA0440_RS13525 PF02568 Thiamine biosynthesis protein (ThiI) QMA0440_RS13530 PF02609 Exonuclease VII small subunit QMA0440_RS13535 PF00348 Polyprenyl synthetase QMA0440_RS13540 PF13292 1-deoxy-D-xylulose-5-phosphate synthase QMA0440_RS13540 PF02779 Transketolase, pyrimidine binding domain QMA0440_RS13540 PF02780 Transketolase, C-terminal domain QMA0440_RS13545 PF04608 Phosphatidylglycerophosphatase A QMA0440_RS13550 PF00586 AIR synthase related protein, N-terminal domain QMA0440_RS13550 PF02769 AIR synthase related protein, C-terminal domain QMA0440_RS13555 PF01029 NusB family QMA0440_RS13560 PF00885 6,7-dimethyl-8-ribityllumazine synthase QMA0440_RS13565 PF01872 RibD C-terminal domain QMA0440_RS13565 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region QMA0440_RS13570 PF03477 ATP cone domain QMA0440_RS13575 PF07549 SecD/SecF GG Motif QMA0440_RS13575 PF02355 Protein export membrane protein QMA0440_RS13580 PF02355 Protein export membrane protein QMA0440_RS13580 PF13721 SecD export protein N-terminal TM region QMA0440_RS13580 PF07549 SecD/SecF GG Motif QMA0440_RS13585 PF02699 Preprotein translocase subunit QMA0440_RS13590 PF01702 Queuine tRNA-ribosyltransferase QMA0440_RS13595 PF02547 Queuosine biosynthesis protein QMA0440_RS13600 PF04336 Acyl carrier protein phosphodiesterase QMA0440_RS13605 PF10417 C-terminal domain of 1-Cys peroxiredoxin QMA0440_RS13605 PF00578 AhpC/TSA family QMA0440_RS13615 PF00128 Alpha amylase, catalytic domain QMA0440_RS13615 PF02903 Alpha amylase, N-terminal ig-like domain QMA0440_RS13620 PF00324 Amino acid permease QMA0440_RS13625 PF05525 Branched-chain amino acid transport protein QMA0440_RS13630 PF12849 PBP superfamily domain QMA0440_RS13635 PF11808 Phosphate regulon sensor protein PhoR QMA0440_RS13635 PF00989 PAS fold QMA0440_RS13635 PF00512 His Kinase A (phospho-acceptor) domain QMA0440_RS13635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase QMA0440_RS13640 PF00072 Response regulator receiver domain QMA0440_RS13640 PF00486 Transcriptional regulatory protein, C terminal QMA0440_RS13645 PF12320 Type 5 capsule protein repressor C-terminal domain QMA0440_RS13645 PF00149 Calcineurin-like phosphoesterase QMA0440_RS13650 PF13476 AAA domain QMA0440_RS13655 PF00480 ROK family QMA0440_RS13660 PF04381 Putative exonuclease, RdgC QMA0440_RS13665 PF06865 Pyrimidine/purine nucleoside phosphorylase QMA0440_RS13670 PF07302 AroM protein QMA0440_RS13690 PF01202 Shikimate kinase QMA0440_RS13695 PF07715 TonB-dependent Receptor Plug Domain QMA0440_RS13695 PF00593 TonB dependent receptor QMA0440_RS13720 PF07317 Flagellar regulator YcgR QMA0440_RS13720 PF07238 PilZ domain QMA0440_RS13725 PF00171 Aldehyde dehydrogenase family QMA0440_RS13730 PF00696 Amino acid kinase family QMA0440_RS13730 PF01472 PUA domain QMA0440_RS13735 PF07417 Sigma factor-binding transcriptional regulator Crl QMA0440_RS13740 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) QMA0440_RS13745 PF00156 Phosphoribosyl transferase domain QMA0440_RS13750 PF01546 Peptidase family M20/M25/M40 QMA0440_RS13750 PF07687 Peptidase dimerisation domain QMA0440_RS13755 PF00817 impB/mucB/samB family QMA0440_RS13755 PF11799 impB/mucB/samB family C-terminal domain QMA0440_RS13755 PF11798 IMS family HHH motif QMA0440_RS13760 PF03009 Glycerophosphoryl diester phosphodiesterase family QMA0440_RS13765 PF04400 (Na+)-NQR maturation NqrM QMA0440_RS13770 PF02424 ApbE family QMA0440_RS13775 PF00970 Oxidoreductase FAD-binding domain QMA0440_RS13775 PF00175 Oxidoreductase NAD-binding domain QMA0440_RS13775 PF00111 2Fe-2S iron-sulfur cluster binding domain QMA0440_RS13780 PF02508 Rnf-Nqr subunit, membrane protein QMA0440_RS13785 PF02508 Rnf-Nqr subunit, membrane protein QMA0440_RS13790 PF04205 FMN-binding domain QMA0440_RS13795 PF03116 NQR2, RnfD, RnfE family QMA0440_RS13800 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) QMA0440_RS13800 PF11973 NQRA C-terminal domain QMA0440_RS13805 PF03734 L,D-transpeptidase catalytic domain QMA0440_RS13810 PF13230 Glutamine amidotransferases class-II QMA0440_RS13815 PF13580 SIS domain QMA0440_RS13820 PF00441 Acyl-CoA dehydrogenase, C-terminal domain QMA0440_RS13820 PF02771 Acyl-CoA dehydrogenase, N-terminal domain QMA0440_RS13820 PF09317 Domain of unknown function (DUF1974) QMA0440_RS13830 PF00929 Exonuclease QMA0440_RS13835 PF00075 RNase H QMA0440_RS13840 PF08241 Methyltransferase domain QMA0440_RS13845 PF00753 Metallo-beta-lactamase superfamily QMA0440_RS13845 PF16123 Hydroxyacylglutathione hydrolase C-terminus QMA0440_RS13850 PF01464 Transglycosylase SLT domain QMA0440_RS13850 PF01476 LysM domain QMA0440_RS13855 PF03372 Endonuclease/Exonuclease/phosphatase family QMA0440_RS13895 PF10431 C-terminal, D2-small domain, of ClpB protein QMA0440_RS13895 PF02861 Clp amino terminal domain, pathogenicity island component QMA0440_RS13895 PF17871 AAA lid domain QMA0440_RS13895 PF07724 AAA domain (Cdc48 subfamily) QMA0440_RS13895 PF00004 ATPase family associated with various cellular activities (AAA) QMA0440_RS13900 PF02578 Multi-copper polyphenol oxidoreductase laccase QMA0440_RS13905 PF01479 S4 domain QMA0440_RS13905 PF00849 RNA pseudouridylate synthase QMA0440_RS13915 PF13525 Outer membrane lipoprotein QMA0440_RS13920 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein QMA0440_RS13925 PF01817 Chorismate mutase type II QMA0440_RS13925 PF00800 Prephenate dehydratase QMA0440_RS13930 PF02153 Prephenate dehydrogenase QMA0440_RS13930 PF01817 Chorismate mutase type II QMA0440_RS13935 PF00793 DAHP synthetase I family QMA0440_RS13940 PF04397 LytTr DNA-binding domain QMA0440_RS13940 PF00072 Response regulator receiver domain QMA0440_RS13945 PF03605 Anaerobic c4-dicarboxylate membrane transporter QMA0440_RS13950 PF04338 Protein of unknown function, DUF481 QMA0440_RS13955 PF01245 Ribosomal protein L19 QMA0440_RS13960 PF01746 tRNA (Guanine-1)-methyltransferase QMA0440_RS13965 PF01782 RimM N-terminal domain QMA0440_RS13965 PF05239 PRC-barrel domain QMA0440_RS13970 PF00886 Ribosomal protein S16 QMA0440_RS13975 PF00448 SRP54-type protein, GTPase domain QMA0440_RS13975 PF02881 SRP54-type protein, helical bundle domain QMA0440_RS13975 PF02978 Signal peptide binding domain QMA0440_RS13980 PF01578 Cytochrome C assembly protein QMA0440_RS13985 PF03471 Transporter associated domain QMA0440_RS13985 PF01595 Cyclin M transmembrane N-terminal domain QMA0440_RS13985 PF00571 CBS domain QMA0440_RS13990 PF02664 S-Ribosylhomocysteinase (LuxS) QMA0440_RS13995 PF04262 Glutamate-cysteine ligase QMA0440_RS14000 PF09335 SNARE associated Golgi protein QMA0440_RS14005 PF13419 Haloacid dehalogenase-like hydrolase QMA0440_RS14010 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain QMA0440_RS14010 PF01411 tRNA synthetases class II (A) QMA0440_RS14040 PF02599 Global regulator protein family QMA0440_RS14045 PF02272 DHHA1 domain QMA0440_RS14045 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain QMA0440_RS14045 PF01411 tRNA synthetases class II (A) QMA0440_RS14050 PF02631 RecX family QMA0440_RS14055 PF00154 recA bacterial DNA recombination protein QMA0440_RS14060 PF02464 Competence-damaged protein QMA0440_RS14065 PF07690 Major Facilitator Superfamily QMA0440_RS14070 PF05681 Fumarate hydratase (Fumerase) QMA0440_RS14070 PF05683 Fumarase C-terminus QMA0440_RS14095 PF11356 Type II secretion system protein C QMA0440_RS14100 PF03958 Bacterial type II/III secretion system short domain QMA0440_RS14100 PF00263 Bacterial type II and III secretion system protein QMA0440_RS14105 PF00437 Type II/IV secretion system protein QMA0440_RS14110 PF00482 Type II secretion system (T2SS), protein F QMA0440_RS14115 PF08334 Type II secretion system (T2SS), protein G QMA0440_RS14115 PF07963 Prokaryotic N-terminal methylation motif QMA0440_RS14120 PF12019 Type II transport protein GspH QMA0440_RS14120 PF07963 Prokaryotic N-terminal methylation motif QMA0440_RS14125 PF02501 Type II secretion system (T2SS), protein I QMA0440_RS14125 PF07963 Prokaryotic N-terminal methylation motif QMA0440_RS14130 PF11612 Type II secretion system (T2SS), protein J QMA0440_RS14130 PF07963 Prokaryotic N-terminal methylation motif QMA0440_RS14135 PF03934 Type II secretion system (T2SS), protein K QMA0440_RS14140 PF05134 Type II secretion system (T2SS), protein L QMA0440_RS14140 PF12693 GspL periplasmic domain QMA0440_RS14150 PF06750 Bacterial Peptidase A24 N-terminal domain QMA0440_RS14150 PF01478 Type IV leader peptidase family QMA0440_RS14155 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) QMA0440_RS14160 PF18416 N-acetylglucosamine binding protein domain 2 QMA0440_RS14160 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading QMA0440_RS14180 PF00550 Phosphopantetheine attachment site QMA0440_RS14205 PF07720 Tetratricopeptide repeat QMA0440_RS14210 PF01312 FlhB HrpN YscU SpaS Family QMA0440_RS14215 PF01311 Bacterial export proteins, family 1 QMA0440_RS14220 PF01313 Bacterial export proteins, family 3 QMA0440_RS14225 PF00813 FliP family QMA0440_RS14230 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term QMA0440_RS14245 PF02874 ATP synthase alpha/beta family, beta-barrel domain QMA0440_RS14245 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain QMA0440_RS14245 PF18269 T3SS EscN ATPase C-terminal domain QMA0440_RS14255 PF00771 FHIPEP family QMA0440_RS14260 PF07201 HrpJ-like domain QMA0440_RS14265 PF03958 Bacterial type II/III secretion system short domain QMA0440_RS14265 PF00263 Bacterial type II and III secretion system protein QMA0440_RS14270 PF12833 Helix-turn-helix domain QMA0440_RS14290 PF01514 Secretory protein of YscJ/FliF family QMA0440_RS14305 PF01464 Transglycosylase SLT domain QMA0440_RS14320 PF00072 Response regulator receiver domain QMA0440_RS14320 PF00196 Bacterial regulatory proteins, luxR family QMA0440_RS14325 PF09308 LuxQ, periplasmic QMA0440_RS14325 PF00512 His Kinase A (phospho-acceptor) domain QMA0440_RS14325 PF00072 Response regulator receiver domain QMA0440_RS14325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase QMA0440_RS14335 PF13333 Integrase core domain QMA0440_RS14335 PF00665 Integrase core domain QMA0440_RS14335 PF13276 HTH-like domain QMA0440_RS14345 PF13276 HTH-like domain QMA0440_RS14345 PF13683 Integrase core domain QMA0440_RS14375 PF00501 AMP-binding enzyme QMA0440_RS14375 PF00668 Condensation domain QMA0440_RS14375 PF13193 AMP-binding enzyme C-terminal domain QMA0440_RS14375 PF00550 Phosphopantetheine attachment site QMA0440_RS14385 PF03400 IS1 transposase QMA0440_RS14410 PF05190 MutS family domain IV QMA0440_RS14410 PF05192 MutS domain III QMA0440_RS14410 PF01624 MutS domain I QMA0440_RS14410 PF00488 MutS domain V QMA0440_RS14410 PF05188 MutS domain II QMA0440_RS14415 PF04542 Sigma-70 region 2 QMA0440_RS14415 PF04539 Sigma-70 region 3 QMA0440_RS14415 PF04545 Sigma-70, region 4 QMA0440_RS14415 PF00140 Sigma-70 factor, region 1.2 QMA0440_RS14420 PF01551 Peptidase family M23 QMA0440_RS14420 PF01476 LysM domain QMA0440_RS14430 PF01975 Survival protein SurE QMA0440_RS14435 PF01142 tRNA pseudouridine synthase D (TruD) QMA0440_RS14440 PF02542 YgbB family QMA0440_RS14445 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase QMA0440_RS14450 PF04977 Septum formation initiator QMA0440_RS14455 PF12084 Protein of unknown function (DUF3561) QMA0440_RS14465 PF00009 Elongation factor Tu GTP binding domain QMA0440_RS14470 PF01507 Phosphoadenosine phosphosulfate reductase family QMA0440_RS14475 PF10414 Sirohaem synthase dimerisation region QMA0440_RS14475 PF14824 Sirohaem biosynthesis protein central QMA0440_RS14475 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases QMA0440_RS14480 PF04389 Peptidase family M28 QMA0440_RS14495 PF01507 Phosphoadenosine phosphosulfate reductase family QMA0440_RS14500 PF01077 Nitrite and sulphite reductase 4Fe-4S domain QMA0440_RS14500 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain QMA0440_RS14505 PF00175 Oxidoreductase NAD-binding domain QMA0440_RS14505 PF00258 Flavodoxin QMA0440_RS14505 PF00667 FAD binding domain QMA0440_RS14510 PF01242 6-pyruvoyl tetrahydropterin synthase QMA0440_RS14515 PF04055 Radical SAM superfamily QMA0440_RS14520 PF03952 Enolase, N-terminal domain QMA0440_RS14520 PF00113 Enolase, C-terminal TIM barrel domain QMA0440_RS14525 PF06418 CTP synthase N-terminus QMA0440_RS14525 PF00117 Glutamine amidotransferase class-I QMA0440_RS14530 PF03819 MazG nucleotide pyrophosphohydrolase domain QMA0440_RS14535 PF13291 ACT domain QMA0440_RS14535 PF04607 Region found in RelA / SpoT proteins QMA0440_RS14535 PF02824 TGS domain QMA0440_RS14540 PF05958 tRNA (Uracil-5-)-methyltransferase QMA0440_RS14540 PF01938 TRAM domain QMA0440_RS14545 PF00512 His Kinase A (phospho-acceptor) domain QMA0440_RS14545 PF01627 Hpt domain QMA0440_RS14545 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) QMA0440_RS14545 PF00672 HAMP domain QMA0440_RS14545 PF00072 Response regulator receiver domain QMA0440_RS14545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase QMA0440_RS14550 PF00595 PDZ domain QMA0440_RS14555 PF13286 Phosphohydrolase-associated domain QMA0440_RS14555 PF01966 HD domain QMA0440_RS14560 PF01048 Phosphorylase superfamily QMA0440_RS14565 PF01497 Periplasmic binding protein QMA0440_RS14570 PF03458 UPF0126 domain QMA0440_RS14575 PF01521 Iron-sulphur cluster biosynthesis QMA0440_RS14580 PF00654 Voltage gated chloride channel QMA0440_RS14585 PF00202 Aminotransferase class-III QMA0440_RS14590 PF00905 Penicillin binding protein transpeptidase domain QMA0440_RS14590 PF00912 Transglycosylase QMA0440_RS14590 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal QMA0440_RS14590 PF14814 Bifunctional transglycosylase second domain QMA0440_RS14595 PF04408 Helicase associated domain (HA2) QMA0440_RS14595 PF00271 Helicase conserved C-terminal domain QMA0440_RS14595 PF00270 DEAD/DEAH box helicase QMA0440_RS14595 PF08482 ATP-dependent helicase C-terminal QMA0440_RS14600 PF02834 LigT like Phosphoesterase QMA0440_RS14605 PF03749 Sugar fermentation stimulation protein RE domain QMA0440_RS14605 PF17746 SfsA N-terminal OB domain QMA0440_RS14615 PF01258 Prokaryotic dksA/traR C4-type zinc finger QMA0440_RS14620 PF00749 tRNA synthetases class I (E and Q), catalytic domain QMA0440_RS14625 PF12626 Polymerase A arginine-rich C-terminus QMA0440_RS14625 PF01743 Poly A polymerase head domain QMA0440_RS14625 PF12627 Probable RNA and SrmB- binding site of polymerase A QMA0440_RS14630 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) QMA0440_RS14635 PF02548 Ketopantoate hydroxymethyltransferase QMA0440_RS14640 PF02569 Pantoate-beta-alanine ligase QMA0440_RS14645 PF02261 Aspartate decarboxylase QMA0440_RS14650 PF01522 Polysaccharide deacetylase QMA0440_RS14655 PF01061 ABC-2 type transporter QMA0440_RS14660 PF00005 ABC transporter QMA0440_RS14665 PF00484 Carbonic anhydrase QMA0440_RS14670 PF00156 Phosphoribosyl transferase domain QMA0440_RS14675 PF10518 TAT (twin-arginine translocation) pathway signal sequence QMA0440_RS14675 PF07732 Multicopper oxidase QMA0440_RS14675 PF07731 Multicopper oxidase QMA0440_RS14675 PF00394 Multicopper oxidase QMA0440_RS14680 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) QMA0440_RS14685 PF17284 Spermidine synthase tetramerisation domain QMA0440_RS14690 PF02675 S-adenosylmethionine decarboxylase QMA0440_RS14695 PF00892 EamA-like transporter family QMA0440_RS14700 PF06062 Uncharacterised protein family (UPF0231) QMA0440_RS14705 PF00330 Aconitase family (aconitate hydratase) QMA0440_RS14705 PF06434 Aconitate hydratase 2 N-terminus QMA0440_RS14705 PF11791 Aconitate B N-terminal domain QMA0440_RS14715 PF07992 Pyridine nucleotide-disulphide oxidoreductase QMA0440_RS14715 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain QMA0440_RS14720 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) QMA0440_RS14720 PF00364 Biotin-requiring enzyme QMA0440_RS14720 PF02817 e3 binding domain QMA0440_RS14725 PF17831 Pyruvate dehydrogenase E1 component middle domain QMA0440_RS14725 PF00456 Transketolase, thiamine diphosphate binding domain QMA0440_RS14730 PF07729 FCD domain QMA0440_RS14730 PF00392 Bacterial regulatory proteins, gntR family QMA0440_RS14740 PF00324 Amino acid permease QMA0440_RS14745 PF17113 Regulatory signalling modulator protein AmpE QMA0440_RS14750 PF01510 N-acetylmuramoyl-L-alanine amidase QMA0440_RS14755 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain QMA0440_RS14755 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain QMA0440_RS14760 PF07963 Prokaryotic N-terminal methylation motif QMA0440_RS14765 PF00437 Type II/IV secretion system protein QMA0440_RS14765 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain QMA0440_RS14770 PF00482 Type II secretion system (T2SS), protein F QMA0440_RS14775 PF00478 IMP dehydrogenase / GMP reductase domain QMA0440_RS14780 PF01121 Dephospho-CoA kinase QMA0440_RS14785 PF07072 Cell division protein QMA0440_RS14790 PF03884 DNA gyrase inhibitor YacG QMA0440_RS14795 PF00293 NUDIX domain QMA0440_RS14800 PF07516 SecA Wing and Scaffold domain QMA0440_RS14800 PF01043 SecA preprotein cross-linking domain QMA0440_RS14800 PF07517 SecA DEAD-like domain QMA0440_RS14800 PF02810 SEC-C motif QMA0440_RS14805 PF06558 Secretion monitor precursor protein (SecM) QMA0440_RS14815 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase QMA0440_RS14820 PF00091 Tubulin/FtsZ family, GTPase domain QMA0440_RS14820 PF12327 FtsZ family, C-terminal domain QMA0440_RS14825 PF02491 SHS2 domain inserted in FTSA QMA0440_RS14830 PF08478 POTRA domain, FtsQ-type QMA0440_RS14830 PF03799 Cell division protein FtsQ QMA0440_RS14835 PF01820 D-ala D-ala ligase N-terminus QMA0440_RS14835 PF07478 D-ala D-ala ligase C-terminus QMA0440_RS14840 PF01225 Mur ligase family, catalytic domain QMA0440_RS14840 PF02875 Mur ligase family, glutamate ligase domain QMA0440_RS14840 PF08245 Mur ligase middle domain QMA0440_RS14845 PF03033 Glycosyltransferase family 28 N-terminal domain QMA0440_RS14845 PF04101 Glycosyltransferase family 28 C-terminal domain QMA0440_RS14850 PF01098 Cell cycle protein QMA0440_RS14855 PF08245 Mur ligase middle domain QMA0440_RS14855 PF02875 Mur ligase family, glutamate ligase domain QMA0440_RS14860 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 QMA0440_RS14860 PF00953 Glycosyl transferase family 4 QMA0440_RS14865 PF08245 Mur ligase middle domain QMA0440_RS14865 PF01225 Mur ligase family, catalytic domain QMA0440_RS14865 PF02875 Mur ligase family, glutamate ligase domain QMA0440_RS14870 PF01225 Mur ligase family, catalytic domain QMA0440_RS14870 PF02875 Mur ligase family, glutamate ligase domain QMA0440_RS14870 PF08245 Mur ligase middle domain QMA0440_RS14875 PF00905 Penicillin binding protein transpeptidase domain QMA0440_RS14875 PF03717 Penicillin-binding Protein dimerisation domain QMA0440_RS14880 PF04999 Cell division protein FtsL QMA0440_RS14885 PF01795 MraW methylase family QMA0440_RS14890 PF02381 MraZ protein, putative antitoxin-like QMA0440_RS14895 PF06610 L-alanine exporter QMA0440_RS14900 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family QMA0440_RS14900 PF00356 Bacterial regulatory proteins, lacI family QMA0440_RS14905 PF10369 Small subunit of acetolactate synthase QMA0440_RS14910 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain QMA0440_RS14910 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain QMA0440_RS14910 PF00205 Thiamine pyrophosphate enzyme, central domain QMA0440_RS14915 PF00501 AMP-binding enzyme QMA0440_RS14920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family QMA0440_RS14920 PF03466 LysR substrate binding domain QMA0440_RS14925 PF08502 LeuA allosteric (dimerisation) domain QMA0440_RS14925 PF00682 HMGL-like QMA0440_RS14930 PF00180 Isocitrate/isopropylmalate dehydrogenase QMA0440_RS14935 PF00330 Aconitase family (aconitate hydratase) QMA0440_RS14940 PF00694 Aconitase C-terminal domain QMA0440_RS14945 PF07690 Major Facilitator Superfamily QMA0440_RS14955 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle QMA0440_RS14955 PF12793 Sugar transport-related sRNA regulator N-term QMA0440_RS14965 PF00528 Binding-protein-dependent transport system inner membrane component QMA0440_RS14970 PF00005 ABC transporter QMA0440_RS14975 PF09335 SNARE associated Golgi protein QMA0440_RS14980 PF03104 DNA polymerase family B, exonuclease domain QMA0440_RS14980 PF00136 DNA polymerase family B QMA0440_RS14985 PF12137 RNA polymerase recycling family C-terminal QMA0440_RS14985 PF00176 SNF2 family N-terminal domain QMA0440_RS14985 PF18339 RapA N-terminal Tudor like domain 1 QMA0440_RS14985 PF00271 Helicase conserved C-terminal domain QMA0440_RS14985 PF18337 RapA N-terminal Tudor like domain QMA0440_RS14990 PF00849 RNA pseudouridylate synthase QMA0440_RS14995 PF00226 DnaJ domain QMA0440_RS14995 PF05099 Tellurite resistance protein TerB QMA0440_RS15000 PF03968 OstA-like protein QMA0440_RS15000 PF04453 LPS transport system D QMA0440_RS15005 PF09312 SurA N-terminal domain QMA0440_RS15005 PF00639 PPIC-type PPIASE domain QMA0440_RS15010 PF04166 Pyridoxal phosphate biosynthetic protein PdxA QMA0440_RS15015 PF00398 Ribosomal RNA adenine dimethylase QMA0440_RS15020 PF04379 ApaG domain QMA0440_RS15025 PF00149 Calcineurin-like phosphoesterase QMA0440_RS15035 PF00186 Dihydrofolate reductase QMA0440_RS15040 PF12821 Threonine/Serine exporter, ThrE QMA0440_RS15045 PF06738 Putative threonine/serine exporter QMA0440_RS15050 PF01810 LysE type translocator QMA0440_RS15055 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain QMA0440_RS15055 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain QMA0440_RS15055 PF02142 MGS-like domain QMA0440_RS15060 PF00117 Glutamine amidotransferase class-I QMA0440_RS15060 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain QMA0440_RS15065 PF05173 Dihydrodipicolinate reductase, C-terminus QMA0440_RS15065 PF01113 Dihydrodipicolinate reductase, N-terminus QMA0440_RS15070 PF02401 LytB protein QMA0440_RS15075 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase QMA0440_RS15080 PF01252 Signal peptidase (SPase) II QMA0440_RS15085 PF08264 Anticodon-binding domain of tRNA QMA0440_RS15085 PF06827 Zinc finger found in FPG and IleRS QMA0440_RS15085 PF00133 tRNA synthetases class I (I, L, M and V) QMA0440_RS15090 PF01687 Riboflavin kinase QMA0440_RS15090 PF06574 FAD synthetase QMA0440_RS15100 PF01649 Ribosomal protein S20 QMA0440_RS15105 PF03466 LysR substrate binding domain QMA0440_RS15105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family QMA0440_RS15110 PF06965 Na+/H+ antiporter 1 QMA0440_RS15115 PF00226 DnaJ domain QMA0440_RS15115 PF01556 DnaJ C terminal domain QMA0440_RS15115 PF00684 DnaJ central domain QMA0440_RS15120 PF00012 Hsp70 protein QMA0440_RS15125 PF01184 GPR1/FUN34/yaaH family QMA0440_RS15135 PF07690 Major Facilitator Superfamily QMA0440_RS15140 PF00994 Probable molybdopterin binding domain QMA0440_RS15145 PF00923 Transaldolase/Fructose-6-phosphate aldolase QMA0440_RS15150 PF03883 Peroxide stress protein YaaA QMA0440_RS15155 PF14821 Threonine synthase N terminus QMA0440_RS15155 PF00291 Pyridoxal-phosphate dependent enzyme QMA0440_RS15160 PF00288 GHMP kinases N terminal domain QMA0440_RS15160 PF08544 GHMP kinases C terminal QMA0440_RS15165 PF00696 Amino acid kinase family QMA0440_RS15165 PF01842 ACT domain QMA0440_RS15165 PF13840 ACT domain QMA0440_RS15165 PF00742 Homoserine dehydrogenase QMA0440_RS15165 PF03447 Homoserine dehydrogenase, NAD binding domain QMA0440_RS15170 PF08254 Threonine leader peptide QMA0440_RS15180 PF00072 Response regulator receiver domain QMA0440_RS15180 PF00486 Transcriptional regulatory protein, C terminal QMA0440_RS15185 PF05981 CreA protein QMA0440_RS15190 PF12833 Helix-turn-helix domain QMA0440_RS15190 PF06445 GyrI-like small molecule binding domain QMA0440_RS15195 PF00300 Histidine phosphatase superfamily (branch 1) QMA0440_RS15200 PF01931 Protein of unknown function DUF84 QMA0440_RS15205 PF01371 Trp repressor protein QMA0440_RS15210 PF01464 Transglycosylase SLT domain QMA0440_RS15210 PF14718 Soluble lytic murein transglycosylase L domain QMA0440_RS15215 PF00690 Cation transporter/ATPase, N-terminus QMA0440_RS15215 PF00689 Cation transporting ATPase, C-terminus QMA0440_RS15225 PF00691 OmpA family QMA0440_RS15230 PF12848 ABC transporter QMA0440_RS15230 PF00005 ABC transporter QMA0440_RS15235 PF01381 Helix-turn-helix QMA0440_RS15235 PF13521 AAA domain QMA0440_RS15240 PF18073 Rubredoxin metal binding domain QMA0440_RS15245 PF18429 Domain of unknown function (DUF5609) QMA0440_RS15250 PF10144 Bacterial virulence factor haemolysin QMA0440_RS15255 PF01048 Phosphorylase superfamily QMA0440_RS15260 PF01676 Metalloenzyme superfamily QMA0440_RS15265 PF02885 Glycosyl transferase family, helical bundle domain QMA0440_RS15265 PF00591 Glycosyl transferase family, a/b domain QMA0440_RS15265 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain QMA0440_RS15270 PF01791 DeoC/LacD family aldolase QMA0440_RS15275 PF07670 Nucleoside recognition QMA0440_RS15275 PF07662 Na+ dependent nucleoside transporter C-terminus QMA0440_RS15275 PF01773 Na+ dependent nucleoside transporter N-terminus QMA0440_RS15280 PF01026 TatD related DNase QMA0440_RS15285 PF01734 Patatin-like phospholipase QMA0440_RS15290 PF07043 Protein of unknown function (DUF1328) QMA0440_RS15295 PF04972 BON domain QMA0440_RS15300 PF03144 Elongation factor Tu domain 2 QMA0440_RS15300 PF00009 Elongation factor Tu GTP binding domain QMA0440_RS15300 PF16658 Class II release factor RF3, C-terminal domain QMA0440_RS15305 PF00583 Acetyltransferase (GNAT) family QMA0440_RS15310 PF03603 DNA polymerase III psi subunit QMA0440_RS15315 PF08468 Methyltransferase small domain N-terminal QMA0440_RS15315 PF05175 Methyltransferase small domain QMA0440_RS15335 PF07256 Protein of unknown function (DUF1435) QMA0440_RS15340 PF00990 Diguanylate cyclase, GGDEF domain QMA0440_RS15345 PF00158 Sigma-54 interaction domain QMA0440_RS15345 PF00989 PAS fold QMA0440_RS15345 PF02954 Bacterial regulatory protein, Fis family QMA0440_RS15350 PF03610 PTS system fructose IIA component QMA0440_RS15350 PF05524 PEP-utilising enzyme, N-terminal QMA0440_RS15350 PF00381 PTS HPr component phosphorylation site QMA0440_RS15350 PF00391 PEP-utilising enzyme, mobile domain QMA0440_RS15355 PF02734 DAK2 domain QMA0440_RS15360 PF02733 Dak1 domain QMA0440_RS15365 PF00465 Iron-containing alcohol dehydrogenase QMA0440_RS15370 PF00873 AcrB/AcrD/AcrF family QMA0440_RS15375 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion QMA0440_RS15390 PF01075 Glycosyltransferase family 9 (heptosyltransferase) QMA0440_RS15395 PF10696 Protein of unknown function (DUF2501) QMA0440_RS15405 PF01116 Fructose-bisphosphate aldolase class-II QMA0440_RS15415 PF00884 Sulfatase QMA0440_RS15420 PF04055 Radical SAM superfamily QMA0440_RS15420 PF13186 Iron-sulfur cluster-binding domain QMA0440_RS15425 PF07470 Glycosyl Hydrolase Family 88 QMA0440_RS15435 PF04962 KduI/IolB family QMA0440_RS15440 PF01979 Amidohydrolase family QMA0440_RS15450 PF03613 PTS system mannose/fructose/sorbose family IID component QMA0440_RS15455 PF03609 PTS system sorbose-specific iic component QMA0440_RS15460 PF03830 PTS system sorbose subfamily IIB component QMA0440_RS15465 PF01380 SIS domain QMA0440_RS15470 PF08013 Tagatose 6 phosphate kinase QMA0440_RS15475 PF00455 DeoR C terminal sensor domain QMA0440_RS15475 PF08220 DeoR-like helix-turn-helix domain QMA0440_RS15485 PF00884 Sulfatase QMA0440_RS15490 PF09092 Lyase, N terminal QMA0440_RS15490 PF09093 Lyase, catalytic QMA0440_RS15490 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain QMA0440_RS15490 PF02278 Polysaccharide lyase family 8, super-sandwich domain QMA0440_RS15505 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain QMA0440_RS15505 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain QMA0440_RS15505 PF02278 Polysaccharide lyase family 8, super-sandwich domain QMA0440_RS15510 PF06178 Oligogalacturonate-specific porin protein (KdgM) QMA0440_RS15515 PF01344 Kelch motif QMA0440_RS15520 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A QMA0440_RS15525 PF03230 Antirestriction protein QMA0440_RS15585 PF05016 ParE toxin of type II toxin-antitoxin system, parDE QMA0440_RS15590 PF04221 RelB antitoxin QMA0440_RS15595 PF00589 Phage integrase family QMA0440_RS15595 PF13356 Arm DNA-binding domain QMA0440_RS15605 PF13676 TIR domain QMA0440_RS15620 PF07728 AAA domain (dynein-related subfamily) QMA0440_RS15620 PF12102 Domain of unknown function (DUF3578) QMA0440_RS15640 PF01420 Type I restriction modification DNA specificity domain QMA0440_RS15645 PF02384 N-6 DNA Methylase QMA0440_RS15650 PF00271 Helicase conserved C-terminal domain QMA0440_RS15650 PF04851 Type III restriction enzyme, res subunit QMA0440_RS15650 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) QMA0440_RS15650 PF08463 EcoEI R protein C-terminal QMA0440_RS15655 PF00589 Phage integrase family QMA0440_RS15655 PF13356 Arm DNA-binding domain QMA0440_RS15665 PF03739 Lipopolysaccharide export system permease LptF/LptG QMA0440_RS15670 PF03739 Lipopolysaccharide export system permease LptF/LptG QMA0440_RS15675 PF02789 Cytosol aminopeptidase family, N-terminal domain QMA0440_RS15675 PF00883 Cytosol aminopeptidase family, catalytic domain QMA0440_RS15680 PF04364 DNA polymerase III chi subunit, HolC QMA0440_RS15685 PF08264 Anticodon-binding domain of tRNA QMA0440_RS15685 PF00133 tRNA synthetases class I (I, L, M and V) QMA0440_RS15685 PF10458 Valyl tRNA synthetase tRNA binding arm QMA0440_RS15690 PF00583 Acetyltransferase (GNAT) family QMA0440_RS15695 PF06877 Regulator of ribonuclease activity B QMA0440_RS15700 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain QMA0440_RS15700 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain QMA0440_RS15705 PF03477 ATP cone domain QMA0440_RS15705 PF13597 Anaerobic ribonucleoside-triphosphate reductase QMA0440_RS15715 PF06754 Phosphonate metabolism protein PhnG QMA0440_RS15720 PF05845 Bacterial phosphonate metabolism protein (PhnH) QMA0440_RS15725 PF05861 Bacterial phosphonate metabolism protein (PhnI) QMA0440_RS15730 PF06007 Phosphonate metabolism protein PhnJ QMA0440_RS15735 PF00005 ABC transporter QMA0440_RS15740 PF00005 ABC transporter QMA0440_RS15745 PF07969 Amidohydrolase family QMA0440_RS15755 PF12706 Beta-lactamase superfamily domain QMA0440_RS15760 PF13460 NAD(P)H-binding QMA0440_RS15770 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain QMA0440_RS15770 PF01276 Orn/Lys/Arg decarboxylase, major domain QMA0440_RS15770 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain QMA0440_RS15775 PF13520 Amino acid permease QMA0440_RS15780 PF01541 GIY-YIG catalytic domain QMA0440_RS15785 PF13508 Acetyltransferase (GNAT) domain QMA0440_RS15790 PF02036 SCP-2 sterol transfer family QMA0440_RS15795 PF01136 Peptidase family U32 QMA0440_RS15800 PF01136 Peptidase family U32 QMA0440_RS15805 PF03313 Serine dehydratase alpha chain QMA0440_RS15815 PF00296 Luciferase-like monooxygenase QMA0440_RS15820 PF00270 DEAD/DEAH box helicase QMA0440_RS15820 PF12343 Cold shock protein DEAD box A QMA0440_RS15820 PF00271 Helicase conserved C-terminal domain QMA0440_RS15820 PF03880 DbpA RNA binding domain QMA0440_RS15825 PF07719 Tetratricopeptide repeat QMA0440_RS15825 PF13181 Tetratricopeptide repeat QMA0440_RS15830 PF00013 KH domain QMA0440_RS15830 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain QMA0440_RS15830 PF03725 3' exoribonuclease family, domain 2 QMA0440_RS15830 PF00575 S1 RNA binding domain QMA0440_RS15830 PF01138 3' exoribonuclease family, domain 1 QMA0440_RS15835 PF00312 Ribosomal protein S15 QMA0440_RS15840 PF16198 tRNA pseudouridylate synthase B C-terminal domain QMA0440_RS15840 PF01509 TruB family pseudouridylate synthase (N terminal domain) QMA0440_RS15840 PF09157 Pseudouridine synthase II TruB, C-terminal QMA0440_RS15845 PF02033 Ribosome-binding factor A QMA0440_RS15850 PF11987 Translation-initiation factor 2 QMA0440_RS15850 PF04760 Translation initiation factor IF-2, N-terminal region QMA0440_RS15850 PF08364 Bacterial translation initiation factor IF-2 associated region QMA0440_RS15850 PF00009 Elongation factor Tu GTP binding domain QMA0440_RS15850 PF03144 Elongation factor Tu domain 2 QMA0440_RS15855 PF00575 S1 RNA binding domain QMA0440_RS15855 PF08529 NusA N-terminal domain QMA0440_RS15855 PF13184 NusA-like KH domain QMA0440_RS15860 PF17384 RimP C-terminal SH3 domain QMA0440_RS15860 PF02576 RimP N-terminal domain QMA0440_RS15875 PF03840 Preprotein translocase SecG subunit QMA0440_RS15880 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain QMA0440_RS15880 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II QMA0440_RS15880 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I QMA0440_RS15880 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III QMA0440_RS15885 PF00809 Pterin binding enzyme QMA0440_RS15890 PF00004 ATPase family associated with various cellular activities (AAA) QMA0440_RS15890 PF17862 AAA+ lid domain QMA0440_RS15890 PF06480 FtsH Extracellular QMA0440_RS15890 PF01434 Peptidase family M41 QMA0440_RS15895 PF01728 FtsJ-like methyltransferase QMA0440_RS15900 PF01985 CRS1 / YhbY (CRM) domain QMA0440_RS15905 PF01272 Transcription elongation factor, GreA/GreB, C-term QMA0440_RS15905 PF03449 Transcription elongation factor, N-terminal QMA0440_RS15910 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family QMA0440_RS15915 PF00486 Transcriptional regulatory protein, C terminal QMA0440_RS15915 PF00072 Response regulator receiver domain QMA0440_RS15920 PF00672 HAMP domain QMA0440_RS15920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase QMA0440_RS15920 PF00512 His Kinase A (phospho-acceptor) domain QMA0440_RS15925 PF01018 GTP1/OBG QMA0440_RS15925 PF01926 50S ribosome-binding GTPase QMA0440_RS15930 PF00892 EamA-like transporter family QMA0440_RS15935 PF01016 Ribosomal L27 protein QMA0440_RS15940 PF00829 Ribosomal prokaryotic L21 protein QMA0440_RS15945 PF00348 Polyprenyl synthetase QMA0440_RS15960 PF13693 Winged helix-turn-helix DNA-binding QMA0440_RS15965 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain QMA0440_RS15965 PF00056 lactate/malate dehydrogenase, NAD binding domain QMA0440_RS15970 PF01316 Arginine repressor, DNA binding domain QMA0440_RS15970 PF02863 Arginine repressor, C-terminal domain QMA0440_RS15975 PF01225 Mur ligase family, catalytic domain QMA0440_RS15975 PF08245 Mur ligase middle domain QMA0440_RS15975 PF02875 Mur ligase family, glutamate ligase domain QMA0440_RS15980 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain QMA0440_RS15985 PF00719 Inorganic pyrophosphatase QMA0440_RS15990 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like QMA0440_RS15995 PF04357 TamB, inner membrane protein subunit of TAM complex QMA0440_RS16000 PF17243 POTRA domain TamA domain 1 QMA0440_RS16000 PF07244 Surface antigen variable number repeat QMA0440_RS16000 PF01103 Surface antigen QMA0440_RS16005 PF01625 Peptide methionine sulfoxide reductase QMA0440_RS16010 PF03471 Transporter associated domain QMA0440_RS16010 PF01595 Cyclin M transmembrane N-terminal domain QMA0440_RS16010 PF00571 CBS domain QMA0440_RS16015 PF06526 Protein of unknown function (DUF1107) QMA0440_RS16020 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) QMA0440_RS16025 PF00459 Inositol monophosphatase family QMA0440_RS16030 PF02872 5'-nucleotidase, C-terminal domain QMA0440_RS16030 PF00149 Calcineurin-like phosphoesterase QMA0440_RS16035 PF01814 Hemerythrin HHE cation binding domain QMA0440_RS16035 PF04405 Domain of Unknown function (DUF542) QMA0440_RS16040 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase QMA0440_RS16040 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase QMA0440_RS16045 PF08525 Opacity-associated protein A N-terminal motif QMA0440_RS16045 PF04225 Opacity-associated protein A LysM-like domain QMA0440_RS16050 PF01281 Ribosomal protein L9, N-terminal domain QMA0440_RS16050 PF03948 Ribosomal protein L9, C-terminal domain QMA0440_RS16055 PF01084 Ribosomal protein S18 QMA0440_RS16060 PF00436 Single-strand binding protein family QMA0440_RS16065 PF01250 Ribosomal protein S6 QMA0440_RS16080 PF00326 Prolyl oligopeptidase family QMA0440_RS16100 PF00577 Outer membrane usher protein QMA0440_RS16100 PF13953 PapC C-terminal domain QMA0440_RS16100 PF13954 PapC N-terminal domain QMA0440_RS16105 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain QMA0440_RS16125 PF08032 RNA 2'-O ribose methyltransferase substrate binding QMA0440_RS16125 PF00588 SpoU rRNA Methylase family QMA0440_RS16130 PF17876 Cold shock domain QMA0440_RS16130 PF08461 Ribonuclease R winged-helix domain QMA0440_RS16130 PF00575 S1 RNA binding domain QMA0440_RS16130 PF00773 RNB domain QMA0440_RS16130 PF08206 Ribonuclease B OB domain QMA0440_RS16135 PF02082 Transcriptional regulator QMA0440_RS16140 PF00709 Adenylosuccinate synthetase QMA0440_RS16145 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) QMA0440_RS16150 PF01145 SPFH domain / Band 7 family QMA0440_RS16155 PF01145 SPFH domain / Band 7 family QMA0440_RS16155 PF12221 Bacterial membrane protein N terminal QMA0440_RS16160 PF01926 50S ribosome-binding GTPase QMA0440_RS16160 PF13167 GTP-binding GTPase N-terminal QMA0440_RS16160 PF16360 GTP-binding GTPase Middle Region QMA0440_RS16165 PF17209 Hfq protein QMA0440_RS16175 PF01119 DNA mismatch repair protein, C-terminal domain QMA0440_RS16175 PF08676 MutL C terminal dimerisation domain QMA0440_RS16180 PF01520 N-acetylmuramoyl-L-alanine amidase QMA0440_RS16185 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE QMA0440_RS16190 PF03853 YjeF-related protein N-terminus QMA0440_RS16190 PF01256 Carbohydrate kinase QMA0440_RS16195 PF08331 Domain of unknown function (DUF1730) QMA0440_RS16215 PF00929 Exonuclease QMA0440_RS16220 PF03193 RsgA GTPase QMA0440_RS16225 PF02666 Phosphatidylserine decarboxylase QMA0440_RS16230 PF00924 Mechanosensitive ion channel QMA0440_RS16230 PF12795 Mechanosensitive ion channel porin domain QMA0440_RS16230 PF12794 Mechanosensitive ion channel inner membrane domain 1 QMA0440_RS16235 PF00152 tRNA synthetases class II (D, K and N) QMA0440_RS16240 PF02910 Fumarate reductase flavoprotein C-term QMA0440_RS16240 PF00890 FAD binding domain QMA0440_RS16245 PF13183 4Fe-4S dicluster domain QMA0440_RS16245 PF13085 2Fe-2S iron-sulfur cluster binding domain QMA0440_RS16250 PF02300 Fumarate reductase subunit C QMA0440_RS16255 PF02313 Fumarate reductase subunit D QMA0440_RS16260 PF08212 Lipocalin-like domain QMA0440_RS16265 PF00893 Small Multidrug Resistance protein QMA0440_RS16270 PF00419 Fimbrial protein QMA0440_RS16275 PF00577 Outer membrane usher protein QMA0440_RS16275 PF13954 PapC N-terminal domain QMA0440_RS16275 PF13953 PapC C-terminal domain QMA0440_RS16280 PF02753 Pili assembly chaperone PapD, C-terminal domain QMA0440_RS16280 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain QMA0440_RS16290 PF00196 Bacterial regulatory proteins, luxR family QMA0440_RS16295 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading QMA0440_RS16295 PF18416 N-acetylglucosamine binding protein domain 2 QMA0440_RS16300 PF08207 Elongation factor P (EF-P) KOW-like domain QMA0440_RS16300 PF01132 Elongation factor P (EF-P) OB domain QMA0440_RS16300 PF09285 Elongation factor P, C-terminal QMA0440_RS16305 PF04055 Radical SAM superfamily QMA0440_RS16310 PF13698 Domain of unknown function (DUF4156) QMA0440_RS16315 PF00118 TCP-1/cpn60 chaperonin family QMA0440_RS16320 PF00166 Chaperonin 10 Kd subunit QMA0440_RS16325 PF04186 FxsA cytoplasmic membrane protein QMA0440_RS16330 PF00206 Lyase QMA0440_RS16330 PF10415 Fumarase C C-terminus QMA0440_RS16335 PF03605 Anaerobic c4-dicarboxylate membrane transporter QMA0440_RS16340 PF03091 CutA1 divalent ion tolerance protein QMA0440_RS16345 PF02683 Cytochrome C biogenesis protein transmembrane region QMA0440_RS16345 PF11412 Disulphide bond corrector protein DsbC QMA0440_RS16370 PF02350 UDP-N-acetylglucosamine 2-epimerase QMA0440_RS16375 PF01370 NAD dependent epimerase/dehydratase family QMA0440_RS16380 PF02719 Polysaccharide biosynthesis protein QMA0440_RS16380 PF08485 Polysaccharide biosynthesis protein C-terminal QMA0440_RS16385 PF00977 Histidine biosynthesis protein QMA0440_RS16390 PF00117 Glutamine amidotransferase class-I QMA0440_RS16395 PF00795 Carbon-nitrogen hydrolase QMA0440_RS16395 PF02540 NAD synthase QMA0440_RS16420 PF02348 Cytidylyltransferase QMA0440_RS16420 PF13472 GDSL-like Lipase/Acylhydrolase family QMA0440_RS16430 PF00483 Nucleotidyl transferase QMA0440_RS16440 PF08666 SAF domain QMA0440_RS16440 PF03102 NeuB family QMA0440_RS16445 PF02350 UDP-N-acetylglucosamine 2-epimerase QMA0440_RS16450 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family QMA0440_RS16455 PF02719 Polysaccharide biosynthesis protein QMA0440_RS16460 PF01206 Sulfurtransferase TusA QMA0440_RS16470 PF00375 Sodium:dicarboxylate symporter family QMA0440_RS16475 PF00501 AMP-binding enzyme QMA0440_RS16475 PF16177 Acetyl-coenzyme A synthetase N-terminus QMA0440_RS16475 PF13193 AMP-binding enzyme C-terminal domain QMA0440_RS16480 PF04341 Protein of unknown function, DUF485 QMA0440_RS16485 PF00474 Sodium:solute symporter family QMA0440_RS16520 PF12724 Flavodoxin domain QMA0440_RS16525 PF02386 Cation transport protein QMA0440_RS16530 PF09186 Domain of unknown function (DUF1949) QMA0440_RS16530 PF01205 Uncharacterized protein family UPF0029 QMA0440_RS16535 PF00557 Metallopeptidase family M24 QMA0440_RS16540 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain QMA0440_RS16540 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain QMA0440_RS16540 PF00378 Enoyl-CoA hydratase/isomerase QMA0440_RS16545 PF02803 Thiolase, C-terminal domain QMA0440_RS16545 PF00108 Thiolase, N-terminal domain QMA0440_RS16550 PF00175 Oxidoreductase NAD-binding domain QMA0440_RS16550 PF00970 Oxidoreductase FAD-binding domain QMA0440_RS16555 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase QMA0440_RS16565 PF02357 Transcription termination factor nusG QMA0440_RS16570 PF00490 Delta-aminolevulinic acid dehydratase QMA0440_RS16575 PF01026 TatD related DNase QMA0440_RS16580 PF00902 Sec-independent protein translocase protein (TatC) QMA0440_RS16590 PF02416 mttA/Hcf106 family QMA0440_RS16595 PF03109 ABC1 family QMA0440_RS16600 PF02036 SCP-2 sterol transfer family QMA0440_RS16605 PF01209 ubiE/COQ5 methyltransferase family QMA0440_RS16610 PF02646 RmuC family QMA0440_RS16615 PF09335 SNARE associated Golgi protein QMA0440_RS16620 PF13722 5TM C-terminal transporter carbon starvation CstA QMA0440_RS16620 PF02554 Carbon starvation protein CstA QMA0440_RS16630 PF01048 Phosphorylase superfamily QMA0440_RS16635 PF01738 Dienelactone hydrolase family QMA0440_RS16640 PF01717 Cobalamin-independent synthase, Catalytic domain QMA0440_RS16640 PF08267 Cobalamin-independent synthase, N-terminal domain QMA0440_RS16645 PF03466 LysR substrate binding domain QMA0440_RS16645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family QMA0440_RS16650 PF00892 EamA-like transporter family QMA0440_RS16660 PF03009 Glycerophosphoryl diester phosphodiesterase family QMA0440_RS16665 PF17912 MalK OB fold domain QMA0440_RS16665 PF00005 ABC transporter QMA0440_RS16670 PF00528 Binding-protein-dependent transport system inner membrane component QMA0440_RS16675 PF00528 Binding-protein-dependent transport system inner membrane component QMA0440_RS16680 PF13416 Bacterial extracellular solute-binding protein QMA0440_RS16715 PF00005 ABC transporter QMA0440_RS16720 PF00005 ABC transporter QMA0440_RS16720 PF12399 Branched-chain amino acid ATP-binding cassette transporter QMA0440_RS16725 PF11862 Domain of unknown function (DUF3382) QMA0440_RS16725 PF02653 Branched-chain amino acid transport system / permease component QMA0440_RS16730 PF02653 Branched-chain amino acid transport system / permease component QMA0440_RS16735 PF13458 Periplasmic binding protein QMA0440_RS16740 PF12568 Acetyltransferase (GNAT) domain, PanZ QMA0440_RS16745 PF02595 Glycerate kinase family QMA0440_RS16750 PF02447 GntP family permease QMA0440_RS16755 PF13556 PucR C-terminal helix-turn-helix domain QMA0440_RS16755 PF17853 GGDEF-like domain QMA0440_RS16755 PF05651 Putative sugar diacid recognition QMA0440_RS16760 PF00140 Sigma-70 factor, region 1.2 QMA0440_RS16760 PF04542 Sigma-70 region 2 QMA0440_RS16760 PF04545 Sigma-70, region 4 QMA0440_RS16765 PF02687 FtsX-like permease family QMA0440_RS16765 PF18075 FtsX extracellular domain QMA0440_RS16770 PF00005 ABC transporter QMA0440_RS16775 PF00448 SRP54-type protein, GTPase domain QMA0440_RS16775 PF00448 SRP54-type protein, GTPase domain QMA0440_RS16775 PF02881 SRP54-type protein, helical bundle domain QMA0440_RS16775 PF02881 SRP54-type protein, helical bundle domain QMA0440_RS16785 PF06611 Protein of unknown function (DUF1145) QMA0440_RS16800 PF07947 YhhN family QMA0440_RS16805 PF00403 Heavy-metal-associated domain QMA0440_RS16810 PF01206 Sulfurtransferase TusA QMA0440_RS16815 PF02592 Putative vitamin uptake transporter QMA0440_RS16820 PF08786 DcrB QMA0440_RS16825 PF02754 Cysteine-rich domain QMA0440_RS16825 PF13183 4Fe-4S dicluster domain QMA0440_RS16830 PF00890 FAD binding domain QMA0440_RS16835 PF04324 BFD-like [2Fe-2S] binding domain QMA0440_RS16835 PF01266 FAD dependent oxidoreductase QMA0440_RS16845 PF07690 Major Facilitator Superfamily QMA0440_RS16850 PF03009 Glycerophosphoryl diester phosphodiesterase family QMA0440_RS16860 PF12146 Serine aminopeptidase, S33 QMA0440_RS16865 PF01810 LysE type translocator QMA0440_RS16870 PF00270 DEAD/DEAH box helicase QMA0440_RS16870 PF16124 RecQ zinc-binding QMA0440_RS16870 PF00271 Helicase conserved C-terminal domain QMA0440_RS16870 PF00570 HRDC domain QMA0440_RS16870 PF09382 RQC domain QMA0440_RS16875 PF02253 Phospholipase A1 QMA0440_RS16880 PF03061 Thioesterase superfamily QMA0440_RS16885 PF00892 EamA-like transporter family QMA0440_RS16890 PF01544 CorA-like Mg2+ transporter protein QMA0440_RS16900 PF09370 Phosphoenolpyruvate hydrolase-like QMA0440_RS16915 PF13361 UvrD-like helicase C-terminal domain QMA0440_RS16915 PF00580 UvrD/REP helicase N-terminal domain QMA0440_RS16920 PF13419 Haloacid dehalogenase-like hydrolase QMA0440_RS16925 PF00589 Phage integrase family QMA0440_RS16925 PF02899 Phage integrase, N-terminal SAM-like domain QMA0440_RS16930 PF04340 Protein of unknown function, DUF484 QMA0440_RS16935 PF01678 Diaminopimelate epimerase QMA0440_RS16940 PF13627 Prokaryotic lipoprotein-attachment site QMA0440_RS16945 PF01491 Frataxin-like domain QMA0440_RS16950 PF01295 Adenylate cyclase, class-I QMA0440_RS16950 PF12633 Adenylate cyclase NT domain QMA0440_RS16955 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain QMA0440_RS16955 PF03900 Porphobilinogen deaminase, C-terminal domain QMA0440_RS16960 PF02602 Uroporphyrinogen-III synthase HemD QMA0440_RS16965 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase QMA0440_RS16970 PF07719 Tetratricopeptide repeat QMA0440_RS16970 PF07219 HemY protein N-terminus QMA0440_RS17000 PF00324 Amino acid permease QMA0440_RS17005 PF03808 Glycosyl transferase WecB/TagA/CpsF family QMA0440_RS17010 PF06899 WzyE protein, O-antigen assembly polymerase QMA0440_RS17015 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 QMA0440_RS17020 PF01943 Polysaccharide biosynthesis protein QMA0440_RS17025 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family QMA0440_RS17035 PF00483 Nucleotidyl transferase QMA0440_RS17040 PF16363 GDP-mannose 4,6 dehydratase QMA0440_RS17045 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain QMA0440_RS17045 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain QMA0440_RS17045 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain QMA0440_RS17050 PF02350 UDP-N-acetylglucosamine 2-epimerase QMA0440_RS17055 PF02706 Chain length determinant protein QMA0440_RS17060 PF00953 Glycosyl transferase family 4 QMA0440_RS17065 PF07497 Rho termination factor, RNA-binding domain QMA0440_RS17065 PF07498 Rho termination factor, N-terminal domain QMA0440_RS17065 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain QMA0440_RS17070 PF00085 Thioredoxin QMA0440_RS17075 PF00271 Helicase conserved C-terminal domain QMA0440_RS17075 PF00270 DEAD/DEAH box helicase QMA0440_RS17080 PF02541 Ppx/GppA phosphatase family QMA0440_RS17085 PF13361 UvrD-like helicase C-terminal domain QMA0440_RS17085 PF00580 UvrD/REP helicase N-terminal domain QMA0440_RS17095 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain QMA0440_RS17095 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain QMA0440_RS17100 PF03466 LysR substrate binding domain QMA0440_RS17100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family QMA0440_RS17105 PF18416 N-acetylglucosamine binding protein domain 2 QMA0440_RS17105 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading QMA0440_RS17110 PF00585 C-terminal regulatory domain of Threonine dehydratase QMA0440_RS17110 PF00291 Pyridoxal-phosphate dependent enzyme QMA0440_RS17115 PF00920 Dehydratase family QMA0440_RS17120 PF01063 Amino-transferase class IV QMA0440_RS17130 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain QMA0440_RS17130 PF00205 Thiamine pyrophosphate enzyme, central domain QMA0440_RS17130 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain QMA0440_RS17135 PF08046 IlvGEDA operon leader peptide QMA0440_RS17140 PF01078 Magnesium chelatase, subunit ChlI QMA0440_RS17140 PF13335 Magnesium chelatase, subunit ChlI C-terminal QMA0440_RS17145 PF04219 Protein of unknown function, DUF QMA0440_RS17150 PF03466 LysR substrate binding domain QMA0440_RS17150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family QMA0440_RS17200 PF01177 Asp/Glu/Hydantoin racemase QMA0440_RS17205 PF00593 TonB dependent receptor QMA0440_RS17205 PF07715 TonB-dependent Receptor Plug Domain QMA0440_RS17210 PF05958 tRNA (Uracil-5-)-methyltransferase QMA0440_RS17215 PF07226 Protein of unknown function (DUF1422) QMA0440_RS17220 PF00440 Bacterial regulatory proteins, tetR family QMA0440_RS17225 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain QMA0440_RS17225 PF07992 Pyridine nucleotide-disulphide oxidoreductase QMA0440_RS17230 PF03466 LysR substrate binding domain QMA0440_RS17230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family QMA0440_RS17235 PF08534 Redoxin QMA0440_RS17235 PF00462 Glutaredoxin QMA0440_RS17240 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain QMA0440_RS17240 PF07992 Pyridine nucleotide-disulphide oxidoreductase QMA0440_RS17260 PF00529 HlyD membrane-fusion protein of T1SS QMA0440_RS17265 PF00664 ABC transporter transmembrane region QMA0440_RS17265 PF00005 ABC transporter QMA0440_RS17275 PF07715 TonB-dependent Receptor Plug Domain QMA0440_RS17275 PF00593 TonB dependent receptor QMA0440_RS17280 PF14698 Argininosuccinate lyase C-terminal QMA0440_RS17280 PF00206 Lyase QMA0440_RS17285 PF00764 Arginosuccinate synthase QMA0440_RS17290 PF00696 Amino acid kinase family QMA0440_RS17295 PF01118 Semialdehyde dehydrogenase, NAD binding domain QMA0440_RS17295 PF02774 Semialdehyde dehydrogenase, dimerisation domain QMA0440_RS17300 PF01546 Peptidase family M20/M25/M40 QMA0440_RS17300 PF07687 Peptidase dimerisation domain QMA0440_RS17310 PF00311 Phosphoenolpyruvate carboxylase QMA0440_RS17320 PF02219 Methylenetetrahydrofolate reductase QMA0440_RS17340 PF00742 Homoserine dehydrogenase QMA0440_RS17340 PF03447 Homoserine dehydrogenase, NAD binding domain QMA0440_RS17340 PF00696 Amino acid kinase family QMA0440_RS17345 PF01053 Cys/Met metabolism PLP-dependent enzyme QMA0440_RS17350 PF01340 Met Apo-repressor, MetJ QMA0440_RS17355 PF01197 Ribosomal protein L31 QMA0440_RS17360 PF17764 3′ DNA-binding domain (3′BD) QMA0440_RS17360 PF00271 Helicase conserved C-terminal domain QMA0440_RS17360 PF18319 PriA DNA helicase Cys-rich region (CRR) domain QMA0440_RS17360 PF00270 DEAD/DEAH box helicase QMA0440_RS17360 PF18074 Primosomal protein N C-terminal domain QMA0440_RS17365 PF00356 Bacterial regulatory proteins, lacI family QMA0440_RS17370 PF05036 Sporulation related domain QMA0440_RS17375 PF00227 Proteasome subunit QMA0440_RS17380 PF00004 ATPase family associated with various cellular activities (AAA) QMA0440_RS17380 PF10431 C-terminal, D2-small domain, of ClpB protein QMA0440_RS17380 PF07724 AAA domain (Cdc48 subfamily) QMA0440_RS17385 PF01040 UbiA prenyltransferase family QMA0440_RS17390 PF03737 Aldolase/RraA QMA0440_RS17395 PF06005 Cell division protein ZapB QMA0440_RS17405 PF00230 Major intrinsic protein QMA0440_RS17410 PF02782 FGGY family of carbohydrate kinases, C-terminal domain QMA0440_RS17410 PF00370 FGGY family of carbohydrate kinases, N-terminal domain QMA0440_RS17415 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded QMA0440_RS17420 PF07690 Major Facilitator Superfamily QMA0440_RS17425 PF00175 Oxidoreductase NAD-binding domain QMA0440_RS17425 PF00970 Oxidoreductase FAD-binding domain QMA0440_RS17430 PF05656 Protein of unknown function (DUF805) QMA0440_RS17435 PF07305 Protein of unknown function (DUF1454) QMA0440_RS17440 PF00121 Triosephosphate isomerase QMA0440_RS17450 PF00365 Phosphofructokinase QMA0440_RS17455 PF01545 Cation efflux family QMA0440_RS17455 PF16916 Dimerisation domain of Zinc Transporter QMA0440_RS17460 PF07813 LTXXQ motif family protein QMA0440_RS17465 PF00072 Response regulator receiver domain QMA0440_RS17465 PF00486 Transcriptional regulatory protein, C terminal QMA0440_RS17470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase QMA0440_RS17470 PF00512 His Kinase A (phospho-acceptor) domain QMA0440_RS17470 PF00672 HAMP domain QMA0440_RS17470 PF16527 Two-component sensor protein CpxA, periplasmic domain QMA0440_RS17475 PF00588 SpoU rRNA Methylase family QMA0440_RS17480 PF00132 Bacterial transferase hexapeptide (six repeats) QMA0440_RS17480 PF06426 Serine acetyltransferase, N-terminal QMA0440_RS17485 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus QMA0440_RS17485 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus QMA0440_RS17490 PF02556 Preprotein translocase subunit SecB QMA0440_RS17495 PF00462 Glutaredoxin QMA0440_RS17500 PF00581 Rhodanese-like domain QMA0440_RS17505 PF06415 BPG-independent PGAM N-terminus (iPGM_N) QMA0440_RS17505 PF01676 Metalloenzyme superfamily QMA0440_RS17510 PF01551 Peptidase family M23 QMA0440_RS17515 PF04748 Divergent polysaccharide deacetylase QMA0440_RS17520 PF00107 Zinc-binding dehydrogenase QMA0440_RS17520 PF08240 Alcohol dehydrogenase GroES-like domain QMA0440_RS17525 PF00155 Aminotransferase class I and II QMA0440_RS17530 PF01370 NAD dependent epimerase/dehydratase family QMA0440_RS17535 PF01075 Glycosyltransferase family 9 (heptosyltransferase) QMA0440_RS17540 PF01075 Glycosyltransferase family 9 (heptosyltransferase) QMA0440_RS17545 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) QMA0440_RS17550 PF00535 Glycosyl transferase family 2 QMA0440_RS17555 PF01467 Cytidylyltransferase-like QMA0440_RS17560 PF06827 Zinc finger found in FPG and IleRS QMA0440_RS17560 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain QMA0440_RS17560 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain QMA0440_RS17565 PF00471 Ribosomal protein L33 QMA0440_RS17570 PF00830 Ribosomal L28 family QMA0440_RS17575 PF04002 RadC-like JAB domain QMA0440_RS17580 PF04127 DNA / pantothenate metabolism flavoprotein QMA0440_RS17580 PF02441 Flavoprotein QMA0440_RS17585 PF00692 dUTPase QMA0440_RS17590 PF00440 Bacterial regulatory proteins, tetR family QMA0440_RS17595 PF00156 Phosphoribosyl transferase domain QMA0440_RS17600 PF03725 3' exoribonuclease family, domain 2 QMA0440_RS17600 PF01138 3' exoribonuclease family, domain 1 QMA0440_RS17605 PF03755 YicC-like family, N-terminal region QMA0440_RS17605 PF08340 Domain of unknown function (DUF1732) QMA0440_RS17615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family QMA0440_RS17615 PF03466 LysR substrate binding domain QMA0440_RS17620 PF13426 PAS domain QMA0440_RS17620 PF00563 EAL domain QMA0440_RS17620 PF00990 Diguanylate cyclase, GGDEF domain QMA0440_RS17625 PF00378 Enoyl-CoA hydratase/isomerase QMA0440_RS17630 PF07670 Nucleoside recognition QMA0440_RS17630 PF01773 Na+ dependent nucleoside transporter N-terminus QMA0440_RS17630 PF07662 Na+ dependent nucleoside transporter C-terminus QMA0440_RS17640 PF03458 UPF0126 domain QMA0440_RS17645 PF03120 NAD-dependent DNA ligase OB-fold domain QMA0440_RS17645 PF01653 NAD-dependent DNA ligase adenylation domain QMA0440_RS17650 PF00625 Guanylate kinase QMA0440_RS17655 PF01192 RNA polymerase Rpb6 QMA0440_RS17660 PF02824 TGS domain QMA0440_RS17660 PF04607 Region found in RelA / SpoT proteins QMA0440_RS17660 PF13291 ACT domain QMA0440_RS17665 PF12105 SpoU, rRNA methylase, C-terminal QMA0440_RS17665 PF00588 SpoU rRNA Methylase family QMA0440_RS17670 PF17191 RecG wedge domain QMA0440_RS17670 PF00271 Helicase conserved C-terminal domain QMA0440_RS17670 PF00270 DEAD/DEAH box helicase QMA0440_RS17675 PF03616 Sodium/glutamate symporter QMA0440_RS17680 PF00860 Permease family QMA0440_RS17685 PF05170 AsmA family QMA0440_RS17690 PF00583 Acetyltransferase (GNAT) family QMA0440_RS17690 PF09500 Putative thioesterase (yiiD_Cterm) QMA0440_RS17695 PF02580 D-Tyr-tRNA(Tyr) deacylase QMA0440_RS17700 PF03631 Virulence factor BrkB QMA0440_RS17705 PF13419 Haloacid dehalogenase-like hydrolase QMA0440_RS17710 PF00679 Elongation factor G C-terminus QMA0440_RS17710 PF00009 Elongation factor Tu GTP binding domain QMA0440_RS17710 PF03144 Elongation factor Tu domain 2 QMA0440_RS17715 PF00120 Glutamine synthetase, catalytic domain QMA0440_RS17715 PF03951 Glutamine synthetase, beta-Grasp domain QMA0440_RS17725 PF00512 His Kinase A (phospho-acceptor) domain QMA0440_RS17725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase QMA0440_RS17725 PF00989 PAS fold QMA0440_RS17730 PF02954 Bacterial regulatory protein, Fis family QMA0440_RS17730 PF00072 Response regulator receiver domain QMA0440_RS17730 PF00158 Sigma-54 interaction domain QMA0440_RS17735 PF06969 HemN C-terminal domain QMA0440_RS17735 PF04055 Radical SAM superfamily QMA0440_RS17745 PF04220 Der GTPase activator (YihI) QMA0440_RS17750 PF01926 50S ribosome-binding GTPase QMA0440_RS17755 PF01612 3'-5' exonuclease QMA0440_RS17755 PF00476 DNA polymerase family A QMA0440_RS17755 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain QMA0440_RS17755 PF01367 5'-3' exonuclease, C-terminal SAM fold QMA0440_RS17760 PF01323 DSBA-like thioredoxin domain QMA0440_RS17765 PF01636 Phosphotransferase enzyme family QMA0440_RS17770 PF06288 Protein of unknown function (DUF1040) QMA0440_RS17775 PF12804 MobA-like NTP transferase domain QMA0440_RS17780 PF03205 Molybdopterin guanine dinucleotide synthesis protein B QMA0440_RS17810 PF07729 FCD domain QMA0440_RS17810 PF00392 Bacterial regulatory proteins, gntR family QMA0440_RS17815 PF00356 Bacterial regulatory proteins, lacI family QMA0440_RS17820 PF00294 pfkB family carbohydrate kinase QMA0440_RS17825 PF13407 Periplasmic binding protein domain QMA0440_RS17830 PF02653 Branched-chain amino acid transport system / permease component QMA0440_RS17835 PF00005 ABC transporter QMA0440_RS17840 PF05025 RbsD / FucU transport protein family QMA0440_RS17845 PF02705 K+ potassium transporter QMA0440_RS17850 PF17868 AAA lid domain QMA0440_RS17850 PF07728 AAA domain (dynein-related subfamily) QMA0440_RS17850 PF12592 Protein of unknown function (DUF3763) QMA0440_RS17855 PF05762 VWA domain containing CoxE-like protein QMA0440_RS17865 PF03590 Aspartate-ammonia ligase QMA0440_RS17870 PF01037 Lrp/AsnC ligand binding domain QMA0440_RS17875 PF00258 Flavodoxin QMA0440_RS17885 PF13932 GidA associated domain QMA0440_RS17885 PF01134 Glucose inhibited division protein A QMA0440_RS17890 PF02527 rRNA small subunit methyltransferase G QMA0440_RS17895 PF03899 ATP synthase I chain QMA0440_RS17900 PF00119 ATP synthase A chain QMA0440_RS17905 PF00137 ATP synthase subunit C QMA0440_RS17910 PF00430 ATP synthase B/B' CF(0) QMA0440_RS17915 PF00213 ATP synthase delta (OSCP) subunit QMA0440_RS17920 PF02874 ATP synthase alpha/beta family, beta-barrel domain QMA0440_RS17920 PF00306 ATP synthase alpha/beta chain, C terminal domain QMA0440_RS17920 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain QMA0440_RS17925 PF00231 ATP synthase QMA0440_RS17930 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain QMA0440_RS17930 PF02874 ATP synthase alpha/beta family, beta-barrel domain QMA0440_RS17935 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain QMA0440_RS17935 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain QMA0440_RS17940 PF12804 MobA-like NTP transferase domain QMA0440_RS17940 PF00132 Bacterial transferase hexapeptide (six repeats) QMA0440_RS17945 PF01380 SIS domain QMA0440_RS17950 PF12849 PBP superfamily domain QMA0440_RS17955 PF00528 Binding-protein-dependent transport system inner membrane component QMA0440_RS17960 PF00528 Binding-protein-dependent transport system inner membrane component QMA0440_RS17965 PF00005 ABC transporter QMA0440_RS17970 PF01895 PhoU domain QMA0440_RS17975 PF00497 Bacterial extracellular solute-binding proteins, family 3 QMA0440_RS17980 PF00528 Binding-protein-dependent transport system inner membrane component QMA0440_RS17985 PF00528 Binding-protein-dependent transport system inner membrane component QMA0440_RS17990 PF00860 Permease family QMA0440_RS17995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain QMA0440_RS17995 PF00672 HAMP domain QMA0440_RS17995 PF02203 Tar ligand binding domain homologue QMA0440_RS18005 PF02753 Pili assembly chaperone PapD, C-terminal domain QMA0440_RS18005 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain QMA0440_RS18010 PF00577 Outer membrane usher protein QMA0440_RS18010 PF13954 PapC N-terminal domain QMA0440_RS18010 PF13953 PapC C-terminal domain QMA0440_RS18020 PF10396 GTP-binding protein TrmE N-terminus QMA0440_RS18020 PF12631 MnmE helical domain QMA0440_RS18020 PF01926 50S ribosome-binding GTPase QMA0440_RS18025 PF14849 YidC periplasmic domain QMA0440_RS18025 PF02096 60Kd inner membrane protein QMA0440_RS18030 PF01809 Putative membrane protein insertion efficiency factor QMA0440_RS18035 PF00825 Ribonuclease P QMA0440_RS18040 PF00468 Ribosomal protein L34