QMA0440_RS00005 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain QMA0440_RS00010 SM00480 DNA polymerase III beta subunit QMA0440_RS00020 SM00387 Histidine kinase-like ATPases QMA0440_RS00020 SM00433 TopoisomeraseII QMA0440_RS00120 SM00972 Spore Coat Protein U domain QMA0440_RS00155 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). QMA0440_RS00155 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain QMA0440_RS00155 SM01358 QMA0440_RS00155 QMA0440_RS00170 SM00926 Molybdopterin oxidoreductase Fe4S4 domain QMA0440_RS00275 SM00421 helix_turn_helix, Lux Regulon QMA0440_RS00275 SM00448 cheY-homologous receiver domain QMA0440_RS00280 SM00387 Histidine kinase-like ATPases QMA0440_RS00310 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS00315 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS00360 SM00028 Tetratricopeptide repeats QMA0440_RS00365 SM00052 Putative diguanylate phosphodiesterase QMA0440_RS00365 SM00267 diguanylate cyclase QMA0440_RS00390 SM00052 Putative diguanylate phosphodiesterase QMA0440_RS00440 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase QMA0440_RS00480 SM00354 helix_turn _helix lactose operon repressor QMA0440_RS00500 SM00859 Semialdehyde dehydrogenase, NAD binding domain QMA0440_RS00510 SM00642 Alpha-amylase domain QMA0440_RS00515 SM00642 Alpha-amylase domain QMA0440_RS00540 SM00420 helix_turn_helix, Deoxyribose operon repressor QMA0440_RS00540 SM01134 QMA0440_RS00540 QMA0440_RS00550 SM00450 Rhodanese Homology Domain QMA0440_RS00555 SM00421 helix_turn_helix, Lux Regulon QMA0440_RS00600 SM00899 QMA0440_RS00600 QMA0440_RS00605 SM00316 Ribosomal protein S1-like RNA-binding domain QMA0440_RS00605 SM00732 Likely ribonuclease with RNase H fold. QMA0440_RS00635 SM00448 cheY-homologous receiver domain QMA0440_RS00635 SM00862 Transcriptional regulatory protein, C terminal QMA0440_RS00640 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain QMA0440_RS00640 SM00387 Histidine kinase-like ATPases QMA0440_RS00640 SM00388 His Kinase A (phosphoacceptor) domain QMA0440_RS00655 SM00363 S4 RNA-binding domain QMA0440_RS00700 SM00965 Secretin and TonB N terminus short domain QMA0440_RS00780 SM00354 helix_turn _helix lactose operon repressor QMA0440_RS00810 SM00100 Cyclic nucleotide-monophosphate binding domain QMA0440_RS00810 SM00419 helix_turn_helix, cAMP Regulatory protein QMA0440_RS00875 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS00940 SM00838 Elongation factor G C-terminus QMA0440_RS00940 SM00889 Elongation factor G, domain IV QMA0440_RS00965 SM01403 QMA0440_RS00965 QMA0440_RS00985 SM01382 QMA0440_RS00985 QMA0440_RS00985 SM01383 QMA0440_RS00985 QMA0440_RS01000 SM00322 K homology RNA-binding domain QMA0440_RS01020 SM01374 QMA0440_RS01020 QMA0440_RS01025 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. QMA0440_RS01090 SM00363 S4 RNA-binding domain QMA0440_RS01090 SM01390 QMA0440_RS01090 QMA0440_RS01095 SM00662 RNA polymerases D QMA0440_RS01105 SM00422 helix_turn_helix, mercury resistance QMA0440_RS01240 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. QMA0440_RS01240 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. QMA0440_RS01245 SM00649 Ribosomal protein L11/L12 QMA0440_RS01275 SM00663 RNA polymerase I subunit A N-terminus QMA0440_RS01280 SM00876 Biotin and Thiamin Synthesis associated domain QMA0440_RS01335 SM00411 bacterial (prokaryotic) histone like domain QMA0440_RS01345 SM01209 QMA0440_RS01345 QMA0440_RS01345 SM01210 QMA0440_RS01345 QMA0440_RS01350 SM00798 AICARFT/IMPCHase bienzyme QMA0440_RS01350 SM00851 MGS-like domain QMA0440_RS01415 SM00346 helix_turn_helix isocitrate lyase regulation QMA0440_RS01420 SM01018 B12 binding domain QMA0440_RS01520 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS01540 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins QMA0440_RS01540 SM00634 Bacterial Ig-like domain (group 1) QMA0440_RS01550 SM00912 haemagglutination activity domain QMA0440_RS01595 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS01620 SM00563 Phosphate acyltransferases QMA0440_RS01650 SM00829 Enoylreductase QMA0440_RS01655 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS01660 SM01005 Alanine racemase, C-terminal domain QMA0440_RS01715 SM00947 Carbonic anhydrase QMA0440_RS01755 SM00878 Biotin carboxylase C-terminal domain QMA0440_RS01780 SM00829 Enoylreductase QMA0440_RS01785 SM00052 Putative diguanylate phosphodiesterase QMA0440_RS01785 SM00267 diguanylate cyclase QMA0440_RS01810 SM00316 Ribosomal protein S1-like RNA-binding domain QMA0440_RS01895 SM00831 Cation transporter/ATPase, N-terminus QMA0440_RS01900 SM00354 helix_turn _helix lactose operon repressor QMA0440_RS01910 SM00642 Alpha-amylase domain QMA0440_RS01955 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS01985 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS02020 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. QMA0440_RS02025 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. QMA0440_RS02085 SM00729 Elongator protein 3, MiaB family, Radical SAM QMA0440_RS02090 SM00073 Histidine Phosphotransfer domain QMA0440_RS02090 SM00091 PAS domain QMA0440_RS02090 SM00387 Histidine kinase-like ATPases QMA0440_RS02090 SM00388 His Kinase A (phosphoacceptor) domain QMA0440_RS02090 SM00448 cheY-homologous receiver domain QMA0440_RS02110 SM00749 bacterial OsmY and nodulation domain QMA0440_RS02190 SM00345 helix_turn_helix gluconate operon transcriptional repressor QMA0440_RS02190 SM00895 QMA0440_RS02190 QMA0440_RS02210 SM00858 QMA0440_RS02210 QMA0440_RS02240 SM00869 Autotransporter beta-domain QMA0440_RS02260 SM00912 haemagglutination activity domain QMA0440_RS02380 SM00400 zinc finger QMA0440_RS02380 SM00493 QMA0440_RS02380 QMA0440_RS02380 SM00766 DNA primase DnaG DnaB-binding QMA0440_RS02400 SM01207 QMA0440_RS02400 QMA0440_RS02405 SM00905 Dihydroneopterin aldolase QMA0440_RS02415 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. QMA0440_RS02420 SM00287 Bacterial SH3 domain homologues QMA0440_RS02425 SM01118 QMA0440_RS02425 QMA0440_RS02490 SM00387 Histidine kinase-like ATPases QMA0440_RS02490 SM00433 TopoisomeraseII QMA0440_RS02505 SM00434 DNA Topoisomerase IV QMA0440_RS02510 SM00563 Phosphate acyltransferases QMA0440_RS02520 SM00729 Elongator protein 3, MiaB family, Radical SAM QMA0440_RS02535 SM00342 helix_turn_helix, arabinose operon control protein QMA0440_RS02650 SM00923 MbtH-like protein QMA0440_RS02655 SM00823 Phosphopantetheine attachment site QMA0440_RS02655 SM00824 Thioesterase QMA0440_RS02665 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS02785 SM00478 endonuclease III QMA0440_RS02785 SM00525 QMA0440_RS02785 QMA0440_RS02810 SM00729 Elongator protein 3, MiaB family, Radical SAM QMA0440_RS02820 SM01152 QMA0440_RS02820 QMA0440_RS02855 SM00732 Likely ribonuclease with RNase H fold. QMA0440_RS02880 SM00731 SprT homologues. QMA0440_RS02885 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor QMA0440_RS02915 SM00861 Transketolase, pyrimidine binding domain QMA0440_RS02920 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain QMA0440_RS02985 SM01011 Aminopeptidase P, N-terminal domain QMA0440_RS03080 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS03110 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS03155 SM00862 Transcriptional regulatory protein, C terminal QMA0440_RS03170 SM00849 Metallo-beta-lactamase superfamily QMA0440_RS03190 SM00354 helix_turn _helix lactose operon repressor QMA0440_RS03195 SM00563 Phosphate acyltransferases QMA0440_RS03215 SM00927 DNA mismatch repair enzyme MutH QMA0440_RS03230 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. QMA0440_RS03295 SM00646 QMA0440_RS03295 QMA0440_RS03315 SM00925 MltA specific insert domain QMA0440_RS03355 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs QMA0440_RS03355 SM00475 5'-3' exonuclease QMA0440_RS03400 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. QMA0440_RS03445 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. QMA0440_RS03455 SM00935 Outer membrane protein (OmpH-like) QMA0440_RS03485 SM00481 DNA polymerase alpha chain like domain QMA0440_RS03515 SM00977 TilS substrate C-terminal domain QMA0440_RS03535 SM01322 QMA0440_RS03535 QMA0440_RS03575 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS03575 SM00930 QMA0440_RS03575 QMA0440_RS03615 SM00155 Phospholipase D. Active site motifs. QMA0440_RS03620 SM00881 CoA binding domain QMA0440_RS03625 SM01144 QMA0440_RS03625 QMA0440_RS03635 SM00967 RNA 2'-O ribose methyltransferase substrate binding QMA0440_RS03655 SM00347 helix_turn_helix multiple antibiotic resistance protein QMA0440_RS03680 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS03725 SM00357 Cold shock protein domain QMA0440_RS03760 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS03950 SM00986 Uracil DNA glycosylase superfamily QMA0440_RS03950 SM00987 UreE urease accessory protein, C-terminal domain QMA0440_RS03965 SM00248 ankyrin repeats QMA0440_RS03970 SM00487 DEAD-like helicases superfamily QMA0440_RS03970 SM00490 helicase superfamily c-terminal domain QMA0440_RS04015 SM00358 Double-stranded RNA binding motif QMA0440_RS04015 SM00535 Ribonuclease III family QMA0440_RS04070 SM00062 Bacterial periplasmic substrate-binding proteins QMA0440_RS04075 SM01211 QMA0440_RS04075 QMA0440_RS04085 SM00387 Histidine kinase-like ATPases QMA0440_RS04085 SM00388 His Kinase A (phosphoacceptor) domain QMA0440_RS04095 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS04095 SM00448 cheY-homologous receiver domain QMA0440_RS04105 SM00938 Nitrogen regulatory protein P-II QMA0440_RS04200 SM00271 DnaJ molecular chaperone homology domain QMA0440_RS04230 SM01359 QMA0440_RS04230 QMA0440_RS04230 SM01360 QMA0440_RS04230 QMA0440_RS04245 SM00562 QMA0440_RS04245 QMA0440_RS04255 SM00028 Tetratricopeptide repeats QMA0440_RS04260 SM00530 Helix-turn-helix XRE-family like proteins QMA0440_RS04280 SM00564 beta-propeller repeat QMA0440_RS04300 SM00116 Domain in cystathionine beta-synthase and other proteins. QMA0440_RS04300 SM01240 QMA0440_RS04300 QMA0440_RS04310 SM00247 Beta/gamma crystallins QMA0440_RS04335 SM00046 Diacylglycerol kinase catalytic domain (presumed) QMA0440_RS04350 SM00448 cheY-homologous receiver domain QMA0440_RS04350 SM00862 Transcriptional regulatory protein, C terminal QMA0440_RS04355 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain QMA0440_RS04355 SM00387 Histidine kinase-like ATPases QMA0440_RS04355 SM00388 His Kinase A (phosphoacceptor) domain QMA0440_RS04415 SM00924 MgtE intracellular N domain QMA0440_RS04445 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS04505 SM01130 QMA0440_RS04505 QMA0440_RS04555 SM00830 Chorismate mutase type II QMA0440_RS04575 SM00421 helix_turn_helix, Lux Regulon QMA0440_RS04575 SM00448 cheY-homologous receiver domain QMA0440_RS04595 SM00926 Molybdopterin oxidoreductase Fe4S4 domain QMA0440_RS04615 SM00919 Malic enzyme, NAD binding domain QMA0440_RS04615 SM01274 QMA0440_RS04615 QMA0440_RS04645 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS04705 SM01130 QMA0440_RS04705 QMA0440_RS04750 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS04785 SM00771 ZipA, C-terminal domain (FtsZ-binding) QMA0440_RS04790 SM00278 Helix-hairpin-helix DNA-binding motif class 1 QMA0440_RS04790 SM00292 breast cancer carboxy-terminal domain QMA0440_RS04790 SM00532 Ligase N family QMA0440_RS04905 SM00448 cheY-homologous receiver domain QMA0440_RS04905 SM00850 LytTr DNA-binding domain QMA0440_RS04910 SM00387 Histidine kinase-like ATPases QMA0440_RS04955 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS05035 SM00463 Small MutS-related domain QMA0440_RS05075 SM00825 Beta-ketoacyl synthase QMA0440_RS05110 SM00345 helix_turn_helix gluconate operon transcriptional repressor QMA0440_RS05125 SM00342 helix_turn_helix, arabinose operon control protein QMA0440_RS05135 SM00859 Semialdehyde dehydrogenase, NAD binding domain QMA0440_RS05180 SM00062 Bacterial periplasmic substrate-binding proteins QMA0440_RS05195 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS05210 SM00052 Putative diguanylate phosphodiesterase QMA0440_RS05240 SM00354 helix_turn _helix lactose operon repressor QMA0440_RS05275 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. QMA0440_RS05315 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region QMA0440_RS05320 SM00926 Molybdopterin oxidoreductase Fe4S4 domain QMA0440_RS05320 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region QMA0440_RS05390 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain QMA0440_RS05400 SM01060 QMA0440_RS05400 QMA0440_RS05430 SM00852 Probable molybdopterin binding domain QMA0440_RS05465 SM00434 DNA Topoisomerase IV QMA0440_RS05470 SM00387 Histidine kinase-like ATPases QMA0440_RS05470 SM00388 His Kinase A (phosphoacceptor) domain QMA0440_RS05470 SM00448 cheY-homologous receiver domain QMA0440_RS05475 SM00421 helix_turn_helix, Lux Regulon QMA0440_RS05475 SM00448 cheY-homologous receiver domain QMA0440_RS05480 SM00387 Histidine kinase-like ATPases QMA0440_RS05480 SM00388 His Kinase A (phosphoacceptor) domain QMA0440_RS05560 SM00487 DEAD-like helicases superfamily QMA0440_RS05560 SM00490 helicase superfamily c-terminal domain QMA0440_RS05565 SM00363 S4 RNA-binding domain QMA0440_RS05580 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS05600 SM00052 Putative diguanylate phosphodiesterase QMA0440_RS05610 SM00014 Acid phosphatase homologues QMA0440_RS05615 SM00833 Cobalamin synthesis protein cobW C-terminal domain QMA0440_RS05640 SM00841 Elongation factor P, C-terminal QMA0440_RS05640 SM01185 QMA0440_RS05640 QMA0440_RS05685 SM00518 AP endonuclease family 2 QMA0440_RS05725 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS05745 SM00479 QMA0440_RS05745 QMA0440_RS05770 SM00100 Cyclic nucleotide-monophosphate binding domain QMA0440_RS05770 SM00419 helix_turn_helix, cAMP Regulatory protein QMA0440_RS05775 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS05795 SM00387 Histidine kinase-like ATPases QMA0440_RS05800 SM00421 helix_turn_helix, Lux Regulon QMA0440_RS05800 SM00448 cheY-homologous receiver domain QMA0440_RS05805 SM00448 cheY-homologous receiver domain QMA0440_RS05810 SM00091 PAS domain QMA0440_RS05810 SM00387 Histidine kinase-like ATPases QMA0440_RS05815 SM00764 Citrate lyase ligase C-terminal domain QMA0440_RS05935 SM00530 Helix-turn-helix XRE-family like proteins QMA0440_RS05965 SM00843 QMA0440_RS05965 QMA0440_RS05995 SM00990 QMA0440_RS05995 QMA0440_RS06085 SM01321 QMA0440_RS06085 QMA0440_RS06225 SM00829 Enoylreductase QMA0440_RS06230 SM01038 Beta galactosidase small chain QMA0440_RS06235 SM00354 helix_turn _helix lactose operon repressor QMA0440_RS06240 SM00357 Cold shock protein domain QMA0440_RS06250 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). QMA0440_RS06250 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain QMA0440_RS06295 SM00073 Histidine Phosphotransfer domain QMA0440_RS06295 SM00260 Two component signalling adaptor domain QMA0440_RS06295 SM00387 Histidine kinase-like ATPases QMA0440_RS06295 SM01231 QMA0440_RS06295 QMA0440_RS06300 SM00260 Two component signalling adaptor domain QMA0440_RS06305 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). QMA0440_RS06305 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain QMA0440_RS06305 SM00319 Homologues of the ligand binding domain of Tar QMA0440_RS06310 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). QMA0440_RS06310 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain QMA0440_RS06310 SM00319 Homologues of the ligand binding domain of Tar QMA0440_RS06315 SM00138 Methyltransferase, chemotaxis proteins QMA0440_RS06320 SM00448 cheY-homologous receiver domain QMA0440_RS06325 SM00448 cheY-homologous receiver domain QMA0440_RS06340 SM00862 Transcriptional regulatory protein, C terminal QMA0440_RS06345 SM00862 Transcriptional regulatory protein, C terminal QMA0440_RS06395 SM00421 helix_turn_helix, Lux Regulon QMA0440_RS06435 SM00858 QMA0440_RS06435 QMA0440_RS06480 SM00047 Lysozyme subfamily 2 QMA0440_RS06540 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS06570 SM00477 DNA/RNA non-specific endonuclease QMA0440_RS06570 SM00892 DNA/RNA non-specific endonuclease QMA0440_RS06580 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. QMA0440_RS06585 SM00342 helix_turn_helix, arabinose operon control protein QMA0440_RS06630 SM00062 Bacterial periplasmic substrate-binding proteins QMA0440_RS06630 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. QMA0440_RS06640 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS06655 SM00862 Transcriptional regulatory protein, C terminal QMA0440_RS06695 SM00421 helix_turn_helix, Lux Regulon QMA0440_RS06695 SM00448 cheY-homologous receiver domain QMA0440_RS06700 SM00465 GIY-YIG type nucleases (URI domain) QMA0440_RS06735 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). QMA0440_RS06735 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain QMA0440_RS06745 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS06860 SM00363 S4 RNA-binding domain QMA0440_RS06890 SM00342 helix_turn_helix, arabinose operon control protein QMA0440_RS06910 SM00357 Cold shock protein domain QMA0440_RS06915 SM00357 Cold shock protein domain QMA0440_RS06955 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) QMA0440_RS06955 SM00091 PAS domain QMA0440_RS06955 SM00267 diguanylate cyclase QMA0440_RS06960 SM00090 RIO-like kinase QMA0440_RS06965 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS06980 SM00342 helix_turn_helix, arabinose operon control protein QMA0440_RS07030 SM00357 Cold shock protein domain QMA0440_RS07060 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor QMA0440_RS07060 SM00450 Rhodanese Homology Domain QMA0440_RS07130 SM01091 Transporter associated domain QMA0440_RS07160 SM00487 DEAD-like helicases superfamily QMA0440_RS07160 SM00490 helicase superfamily c-terminal domain QMA0440_RS07170 SM01022 QMA0440_RS07170 QMA0440_RS07185 SM00479 QMA0440_RS07185 QMA0440_RS07310 SM00530 Helix-turn-helix XRE-family like proteins QMA0440_RS07345 SM00843 QMA0440_RS07345 QMA0440_RS07380 SM00990 QMA0440_RS07380 QMA0440_RS07605 SM01022 QMA0440_RS07605 QMA0440_RS07615 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) QMA0440_RS07615 SM00091 PAS domain QMA0440_RS07615 SM00267 diguanylate cyclase QMA0440_RS07630 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. QMA0440_RS07635 SM00945 ProQ/FINO family QMA0440_RS07640 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. QMA0440_RS07640 SM00245 tail specific protease QMA0440_RS07660 SM00346 helix_turn_helix isocitrate lyase regulation QMA0440_RS07665 SM00644 QMA0440_RS07665 QMA0440_RS07705 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS07755 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain QMA0440_RS07780 SM00873 B3/4 domain QMA0440_RS07780 SM00874 tRNA synthetase B5 domain QMA0440_RS07780 SM00896 Ferredoxin-fold anticodon binding domain QMA0440_RS07785 SM00411 bacterial (prokaryotic) histone like domain QMA0440_RS07840 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS07895 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS07975 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS08055 SM00354 helix_turn _helix lactose operon repressor QMA0440_RS08075 SM00479 QMA0440_RS08075 QMA0440_RS08115 SM00347 helix_turn_helix multiple antibiotic resistance protein QMA0440_RS08135 SM00363 S4 RNA-binding domain QMA0440_RS08170 SM00271 DnaJ molecular chaperone homology domain QMA0440_RS08190 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS08195 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS08230 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS08265 SM00953 QMA0440_RS08265 QMA0440_RS08275 SM00091 PAS domain QMA0440_RS08275 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS08285 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain QMA0440_RS08310 SM00890 Domain of unknown function QMA0440_RS08345 SM00871 Bacterial transcription activator, effector binding domain QMA0440_RS08370 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS08370 SM00487 DEAD-like helicases superfamily QMA0440_RS08370 SM00490 helicase superfamily c-terminal domain QMA0440_RS08370 SM00847 Helicase associated domain (HA2) Add an annotation QMA0440_RS08375 SM00020 Trypsin-like serine protease QMA0440_RS08390 SM00342 helix_turn_helix, arabinose operon control protein QMA0440_RS08405 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain QMA0440_RS08405 SM00387 Histidine kinase-like ATPases QMA0440_RS08405 SM00388 His Kinase A (phosphoacceptor) domain QMA0440_RS08410 SM00448 cheY-homologous receiver domain QMA0440_RS08410 SM00862 Transcriptional regulatory protein, C terminal QMA0440_RS08430 SM01002 Alanine dehydrogenase/PNT, C-terminal domain QMA0440_RS08430 SM01003 Alanine dehydrogenase/PNT, N-terminal domain QMA0440_RS08445 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family QMA0440_RS08450 SM01007 Class II Aldolase and Adducin N-terminal domain QMA0440_RS08465 SM00420 helix_turn_helix, Deoxyribose operon repressor QMA0440_RS08465 SM01134 QMA0440_RS08465 QMA0440_RS08480 SM00100 Cyclic nucleotide-monophosphate binding domain QMA0440_RS08480 SM00419 helix_turn_helix, cAMP Regulatory protein QMA0440_RS08490 SM00871 Bacterial transcription activator, effector binding domain QMA0440_RS08520 SM00849 Metallo-beta-lactamase superfamily QMA0440_RS08680 SM00342 helix_turn_helix, arabinose operon control protein QMA0440_RS08690 SM00900 QMA0440_RS08690 QMA0440_RS08700 SM00478 endonuclease III QMA0440_RS08700 SM00525 QMA0440_RS08700 QMA0440_RS08705 SM00357 Cold shock protein domain QMA0440_RS08705 SM00955 QMA0440_RS08705 QMA0440_RS08710 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. QMA0440_RS08710 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) QMA0440_RS08710 SM00091 PAS domain QMA0440_RS08710 SM00267 diguanylate cyclase QMA0440_RS08730 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family QMA0440_RS08745 SM00028 Tetratricopeptide repeats QMA0440_RS08755 SM00014 Acid phosphatase homologues QMA0440_RS08785 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain QMA0440_RS08785 SM00437 Bacterial DNA topoisomerase I DNA-binding domain QMA0440_RS08785 SM00493 QMA0440_RS08785 QMA0440_RS08805 SM00822 QMA0440_RS08805 QMA0440_RS08815 SM00363 S4 RNA-binding domain QMA0440_RS08825 SM00481 DNA polymerase alpha chain like domain QMA0440_RS08860 SM00749 bacterial OsmY and nodulation domain QMA0440_RS08900 SM00421 helix_turn_helix, Lux Regulon QMA0440_RS08930 SM00862 Transcriptional regulatory protein, C terminal QMA0440_RS08965 SM00155 Phospholipase D. Active site motifs. QMA0440_RS08975 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS08980 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS09030 SM00528 Domain in histone-like proteins of HNS family QMA0440_RS09035 SM00984 UDP binding domain QMA0440_RS09040 SM00448 cheY-homologous receiver domain QMA0440_RS09115 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain QMA0440_RS09115 SM00437 Bacterial DNA topoisomerase I DNA-binding domain QMA0440_RS09115 SM00493 QMA0440_RS09115 QMA0440_RS09135 SM00870 QMA0440_RS09135 QMA0440_RS09155 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain QMA0440_RS09180 SM00763 PrkA AAA domain QMA0440_RS09205 SM00052 Putative diguanylate phosphodiesterase QMA0440_RS09205 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. QMA0440_RS09205 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) QMA0440_RS09205 SM00091 PAS domain QMA0440_RS09205 SM00267 diguanylate cyclase QMA0440_RS09220 SM01005 Alanine racemase, C-terminal domain QMA0440_RS09235 SM00345 helix_turn_helix gluconate operon transcriptional repressor QMA0440_RS09290 SM00341 Helicase and RNase D C-terminal QMA0440_RS09290 SM00474 3'-5' exonuclease QMA0440_RS09310 SM00491 QMA0440_RS09310 QMA0440_RS09355 SM00257 Lysin motif QMA0440_RS09365 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS09380 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS09385 SM00278 Helix-hairpin-helix DNA-binding motif class 1 QMA0440_RS09410 SM00834 Putative regulatory protein QMA0440_RS09445 SM00836 DALR anticodon binding domain QMA0440_RS09445 SM01016 Arginyl tRNA synthetase N terminal dom QMA0440_RS09455 SM00912 haemagglutination activity domain QMA0440_RS09505 SM00481 DNA polymerase alpha chain like domain QMA0440_RS09535 SM00267 diguanylate cyclase QMA0440_RS09565 SM00937 QMA0440_RS09565 QMA0440_RS09585 SM01400 QMA0440_RS09585 QMA0440_RS09640 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. QMA0440_RS09640 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS09720 SM00926 Molybdopterin oxidoreductase Fe4S4 domain QMA0440_RS09755 SM00345 helix_turn_helix gluconate operon transcriptional repressor QMA0440_RS09755 SM00866 QMA0440_RS09755 QMA0440_RS09800 SM00345 helix_turn_helix gluconate operon transcriptional repressor QMA0440_RS09820 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain QMA0440_RS09820 SM00387 Histidine kinase-like ATPases QMA0440_RS09840 SM00342 helix_turn_helix, arabinose operon control protein QMA0440_RS09865 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS09875 SM00235 Zinc-dependent metalloprotease QMA0440_RS09885 SM00387 Histidine kinase-like ATPases QMA0440_RS09890 SM00448 cheY-homologous receiver domain QMA0440_RS09905 SM01321 QMA0440_RS09905 QMA0440_RS09915 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). QMA0440_RS09935 SM00421 helix_turn_helix, Lux Regulon QMA0440_RS09990 SM00843 QMA0440_RS09990 QMA0440_RS10020 SM00409 Immunoglobulin QMA0440_RS10085 SM00507 HNH nucleases QMA0440_RS10135 SM00507 HNH nucleases QMA0440_RS10140 SM01252 QMA0440_RS10140 QMA0440_RS10185 SM00530 Helix-turn-helix XRE-family like proteins QMA0440_RS10240 SM01329 QMA0440_RS10240 QMA0440_RS10275 SM00448 cheY-homologous receiver domain QMA0440_RS10275 SM00862 Transcriptional regulatory protein, C terminal QMA0440_RS10280 SM00387 Histidine kinase-like ATPases QMA0440_RS10280 SM00388 His Kinase A (phosphoacceptor) domain QMA0440_RS10285 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. QMA0440_RS10310 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS10325 SM00487 DEAD-like helicases superfamily QMA0440_RS10325 SM00490 helicase superfamily c-terminal domain QMA0440_RS10325 SM00982 QMA0440_RS10325 QMA0440_RS10325 SM01058 CarD-like/TRCF domain QMA0440_RS10400 SM00825 Beta-ketoacyl synthase QMA0440_RS10410 SM00822 QMA0440_RS10410 QMA0440_RS10415 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. QMA0440_RS10445 SM00363 S4 RNA-binding domain QMA0440_RS10455 SM00316 Ribosomal protein S1-like RNA-binding domain QMA0440_RS10490 SM00421 helix_turn_helix, Lux Regulon QMA0440_RS10500 SM00450 Rhodanese Homology Domain QMA0440_RS10545 SM01091 Transporter associated domain QMA0440_RS10550 SM00947 Carbonic anhydrase QMA0440_RS10570 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase QMA0440_RS10575 SM00992 Hemimethylated DNA-binding protein YccV like QMA0440_RS10580 SM00881 CoA binding domain QMA0440_RS10590 SM00851 MGS-like domain QMA0440_RS10660 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS10665 SM00981 QMA0440_RS10665 QMA0440_RS10715 SM00849 Metallo-beta-lactamase superfamily QMA0440_RS10770 SM00357 Cold shock protein domain QMA0440_RS10775 SM00357 Cold shock protein domain QMA0440_RS10780 SM01150 QMA0440_RS10780 QMA0440_RS10790 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS10795 SM00849 Metallo-beta-lactamase superfamily QMA0440_RS10800 SM00411 bacterial (prokaryotic) histone like domain QMA0440_RS10805 SM00316 Ribosomal protein S1-like RNA-binding domain QMA0440_RS10825 SM00870 QMA0440_RS10825 QMA0440_RS10860 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS10870 SM00843 QMA0440_RS10870 QMA0440_RS10875 SM00344 helix_turn_helix ASNC type QMA0440_RS10885 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS10890 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS10900 SM00316 Ribosomal protein S1-like RNA-binding domain QMA0440_RS10905 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS10905 SM01086 C-terminal, D2-small domain, of ClpB protein QMA0440_RS10915 SM00357 Cold shock protein domain QMA0440_RS10920 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS10980 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS10985 SM00062 Bacterial periplasmic substrate-binding proteins QMA0440_RS10985 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. QMA0440_RS11000 SM00062 Bacterial periplasmic substrate-binding proteins QMA0440_RS11000 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. QMA0440_RS11025 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS11060 SM00014 Acid phosphatase homologues QMA0440_RS11065 SM01133 QMA0440_RS11065 QMA0440_RS11070 SM00420 helix_turn_helix, Deoxyribose operon repressor QMA0440_RS11070 SM01134 QMA0440_RS11070 QMA0440_RS11085 SM00936 Penicillin-binding protein 5, C-terminal domain QMA0440_RS11090 SM00116 Domain in cystathionine beta-synthase and other proteins. QMA0440_RS11160 SM01350 QMA0440_RS11160 QMA0440_RS11175 SM01091 Transporter associated domain QMA0440_RS11235 SM01321 QMA0440_RS11235 QMA0440_RS11250 SM00919 Malic enzyme, NAD binding domain QMA0440_RS11250 SM01274 QMA0440_RS11250 QMA0440_RS11265 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS11275 SM00354 helix_turn _helix lactose operon repressor QMA0440_RS11300 SM00829 Enoylreductase QMA0440_RS11315 SM00852 Probable molybdopterin binding domain QMA0440_RS11325 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS11365 SM00062 Bacterial periplasmic substrate-binding proteins QMA0440_RS11365 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. QMA0440_RS11375 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS11390 SM00487 DEAD-like helicases superfamily QMA0440_RS11390 SM00491 QMA0440_RS11390 QMA0440_RS11425 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS11440 SM00450 Rhodanese Homology Domain QMA0440_RS11465 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS11480 SM00507 HNH nucleases QMA0440_RS11485 SM01118 QMA0440_RS11485 QMA0440_RS11500 SM00364 Leucine-rich repeats, bacterial type QMA0440_RS11500 SM00365 Leucine-rich repeat, SDS22-like subfamily QMA0440_RS11500 SM00369 Leucine-rich repeats, typical (most populated) subfamily QMA0440_RS11510 SM00487 DEAD-like helicases superfamily QMA0440_RS11510 SM00490 helicase superfamily c-terminal domain QMA0440_RS11525 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS11560 SM00729 Elongator protein 3, MiaB family, Radical SAM QMA0440_RS11570 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS11595 SM00487 DEAD-like helicases superfamily QMA0440_RS11595 SM00490 helicase superfamily c-terminal domain QMA0440_RS11600 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS11620 SM00729 Elongator protein 3, MiaB family, Radical SAM QMA0440_RS11620 SM00876 Biotin and Thiamin Synthesis associated domain QMA0440_RS11640 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS11695 SM00855 Phosphoglycerate mutase family QMA0440_RS11705 SM00421 helix_turn_helix, Lux Regulon QMA0440_RS11705 SM00448 cheY-homologous receiver domain QMA0440_RS11710 SM00062 Bacterial periplasmic substrate-binding proteins QMA0440_RS11710 SM00387 Histidine kinase-like ATPases QMA0440_RS11710 SM00388 His Kinase A (phosphoacceptor) domain QMA0440_RS11710 SM00448 cheY-homologous receiver domain QMA0440_RS11820 SM00881 CoA binding domain QMA0440_RS11835 SM00861 Transketolase, pyrimidine binding domain QMA0440_RS11890 SM00797 Allophanate hydrolase subunit 2 QMA0440_RS11895 SM00796 Allophanate hydrolase subunit 1 QMA0440_RS11945 SM00387 Histidine kinase-like ATPases QMA0440_RS11945 SM00388 His Kinase A (phosphoacceptor) domain QMA0440_RS11950 SM00448 cheY-homologous receiver domain QMA0440_RS11950 SM00862 Transcriptional regulatory protein, C terminal QMA0440_RS11980 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). QMA0440_RS11995 SM01321 QMA0440_RS11995 QMA0440_RS12005 SM01081 Putative carbohydrate binding domain QMA0440_RS12090 SM00729 Elongator protein 3, MiaB family, Radical SAM QMA0440_RS12105 SM00116 Domain in cystathionine beta-synthase and other proteins. QMA0440_RS12105 SM01091 Transporter associated domain QMA0440_RS12120 SM00062 Bacterial periplasmic substrate-binding proteins QMA0440_RS12135 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS12400 SM00530 Helix-turn-helix XRE-family like proteins QMA0440_RS12405 SM00530 Helix-turn-helix XRE-family like proteins QMA0440_RS12715 SM00530 Helix-turn-helix XRE-family like proteins QMA0440_RS12720 SM00530 Helix-turn-helix XRE-family like proteins QMA0440_RS12845 SM00936 Penicillin-binding protein 5, C-terminal domain QMA0440_RS12860 SM00729 Elongator protein 3, MiaB family, Radical SAM QMA0440_RS12870 SM00267 diguanylate cyclase QMA0440_RS12885 SM00357 Cold shock protein domain QMA0440_RS12895 SM00421 helix_turn_helix, Lux Regulon QMA0440_RS12925 SM00267 diguanylate cyclase QMA0440_RS12925 SM00448 cheY-homologous receiver domain QMA0440_RS12930 SM00073 Histidine Phosphotransfer domain QMA0440_RS12930 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) QMA0440_RS12930 SM00091 PAS domain QMA0440_RS12930 SM00387 Histidine kinase-like ATPases QMA0440_RS12930 SM00388 His Kinase A (phosphoacceptor) domain QMA0440_RS12930 SM00448 cheY-homologous receiver domain QMA0440_RS12930 SM01079 QMA0440_RS12930 QMA0440_RS12975 SM00331 Sigma factor PP2C-like phosphatases QMA0440_RS12975 SM00448 cheY-homologous receiver domain QMA0440_RS13015 SM01236 QMA0440_RS13015 QMA0440_RS13040 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor QMA0440_RS13105 SM00862 Transcriptional regulatory protein, C terminal QMA0440_RS13110 SM00840 QMA0440_RS13110 QMA0440_RS13125 SM01001 AIR carboxylase QMA0440_RS13140 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS13150 SM00822 QMA0440_RS13150 QMA0440_RS13160 SM00244 prohibitin homologues QMA0440_RS13170 SM00422 helix_turn_helix, mercury resistance QMA0440_RS13220 SM00387 Histidine kinase-like ATPases QMA0440_RS13225 SM00493 QMA0440_RS13225 QMA0440_RS13235 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS13240 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain QMA0440_RS13240 SM00387 Histidine kinase-like ATPases QMA0440_RS13240 SM00388 His Kinase A (phosphoacceptor) domain QMA0440_RS13245 SM00448 cheY-homologous receiver domain QMA0440_RS13245 SM00862 Transcriptional regulatory protein, C terminal QMA0440_RS13355 SM00938 Nitrogen regulatory protein P-II QMA0440_RS13360 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS13365 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS13370 SM00344 helix_turn_helix ASNC type QMA0440_RS13410 SM00411 bacterial (prokaryotic) histone like domain QMA0440_RS13415 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS13415 SM00464 Found in ATP-dependent protease La (LON) QMA0440_RS13420 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS13420 SM00994 ClpX C4-type zinc finger QMA0440_RS13420 SM01086 C-terminal, D2-small domain, of ClpB protein QMA0440_RS13515 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain QMA0440_RS13515 SM00387 Histidine kinase-like ATPases QMA0440_RS13515 SM00388 His Kinase A (phosphoacceptor) domain QMA0440_RS13520 SM00448 cheY-homologous receiver domain QMA0440_RS13525 SM00981 QMA0440_RS13525 QMA0440_RS13540 SM00861 Transketolase, pyrimidine binding domain QMA0440_RS13585 SM01323 QMA0440_RS13585 QMA0440_RS13615 SM00642 Alpha-amylase domain QMA0440_RS13635 SM00091 PAS domain QMA0440_RS13635 SM00387 Histidine kinase-like ATPases QMA0440_RS13635 SM00388 His Kinase A (phosphoacceptor) domain QMA0440_RS13640 SM00448 cheY-homologous receiver domain QMA0440_RS13640 SM00862 Transcriptional regulatory protein, C terminal QMA0440_RS13685 SM00346 helix_turn_helix isocitrate lyase regulation QMA0440_RS13730 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase QMA0440_RS13790 SM00900 QMA0440_RS13790 QMA0440_RS13830 SM00479 QMA0440_RS13830 QMA0440_RS13845 SM00849 Metallo-beta-lactamase superfamily QMA0440_RS13850 SM00257 Lysin motif QMA0440_RS13895 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS13895 SM01086 C-terminal, D2-small domain, of ClpB protein QMA0440_RS13905 SM00363 S4 RNA-binding domain QMA0440_RS13925 SM00830 Chorismate mutase type II QMA0440_RS13930 SM00830 Chorismate mutase type II QMA0440_RS13940 SM00448 cheY-homologous receiver domain QMA0440_RS13940 SM00850 LytTr DNA-binding domain QMA0440_RS13975 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS13975 SM00962 SRP54-type protein, GTPase domain QMA0440_RS13975 SM00963 SRP54-type protein, helical bundle domain QMA0440_RS13985 SM01091 Transporter associated domain QMA0440_RS14045 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain QMA0440_RS14055 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS14090 SM00862 Transcriptional regulatory protein, C terminal QMA0440_RS14105 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS14160 SM00495 Chitin-binding domain type 3 QMA0440_RS14170 SM00194 Protein tyrosine phosphatase, catalytic domain QMA0440_RS14170 SM00404 Protein tyrosine phosphatase, catalytic domain motif QMA0440_RS14245 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS14270 SM00342 helix_turn_helix, arabinose operon control protein QMA0440_RS14320 SM00421 helix_turn_helix, Lux Regulon QMA0440_RS14320 SM00448 cheY-homologous receiver domain QMA0440_RS14325 SM00062 Bacterial periplasmic substrate-binding proteins QMA0440_RS14325 SM00387 Histidine kinase-like ATPases QMA0440_RS14325 SM00448 cheY-homologous receiver domain QMA0440_RS14410 SM00533 DNA-binding domain of DNA mismatch repair MUTS family QMA0440_RS14410 SM00534 ATPase domain of DNA mismatch repair MUTS family QMA0440_RS14420 SM00257 Lysin motif QMA0440_RS14520 SM01192 QMA0440_RS14520 QMA0440_RS14520 SM01193 QMA0440_RS14520 QMA0440_RS14535 SM00954 Region found in RelA / SpoT proteins QMA0440_RS14545 SM00073 Histidine Phosphotransfer domain QMA0440_RS14545 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain QMA0440_RS14545 SM00387 Histidine kinase-like ATPases QMA0440_RS14545 SM00388 His Kinase A (phosphoacceptor) domain QMA0440_RS14545 SM00448 cheY-homologous receiver domain QMA0440_RS14550 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. QMA0440_RS14555 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. QMA0440_RS14595 SM00487 DEAD-like helicases superfamily QMA0440_RS14595 SM00490 helicase superfamily c-terminal domain QMA0440_RS14595 SM00847 Helicase associated domain (HA2) Add an annotation QMA0440_RS14660 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS14665 SM00947 Carbonic anhydrase QMA0440_RS14730 SM00345 helix_turn_helix gluconate operon transcriptional repressor QMA0440_RS14730 SM00895 QMA0440_RS14730 QMA0440_RS14750 SM00644 QMA0440_RS14750 QMA0440_RS14775 SM01240 QMA0440_RS14775 QMA0440_RS14800 SM00957 SecA DEAD-like domain QMA0440_RS14800 SM00958 SecA preprotein cross-linking domain QMA0440_RS14820 SM00864 Tubulin/FtsZ family, GTPase domain QMA0440_RS14820 SM00865 Tubulin/FtsZ family, C-terminal domain QMA0440_RS14825 SM00842 Cell division protein FtsA QMA0440_RS14900 SM00354 helix_turn _helix lactose operon repressor QMA0440_RS14925 SM00917 LeuA allosteric (dimerisation) domain QMA0440_RS14930 SM01329 QMA0440_RS14930 QMA0440_RS14970 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS14980 SM00486 DNA polymerase type-B family QMA0440_RS14985 SM00487 DEAD-like helicases superfamily QMA0440_RS14985 SM00490 helicase superfamily c-terminal domain QMA0440_RS14995 SM00271 DnaJ molecular chaperone homology domain QMA0440_RS15015 SM00650 Ribosomal RNA adenine dimethylases QMA0440_RS15055 SM00851 MGS-like domain QMA0440_RS15055 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain QMA0440_RS15060 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain QMA0440_RS15090 SM00904 Riboflavin kinase QMA0440_RS15115 SM00271 DnaJ molecular chaperone homology domain QMA0440_RS15140 SM00852 Probable molybdopterin binding domain QMA0440_RS15180 SM00448 cheY-homologous receiver domain QMA0440_RS15180 SM00862 Transcriptional regulatory protein, C terminal QMA0440_RS15190 SM00342 helix_turn_helix, arabinose operon control protein QMA0440_RS15190 SM00871 Bacterial transcription activator, effector binding domain QMA0440_RS15195 SM00855 Phosphoglycerate mutase family QMA0440_RS15215 SM00831 Cation transporter/ATPase, N-terminus QMA0440_RS15230 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS15235 SM00530 Helix-turn-helix XRE-family like proteins QMA0440_RS15240 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS15265 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain QMA0440_RS15270 SM01133 QMA0440_RS15270 QMA0440_RS15295 SM00749 bacterial OsmY and nodulation domain QMA0440_RS15340 SM00267 diguanylate cyclase QMA0440_RS15345 SM00091 PAS domain QMA0440_RS15355 SM01120 QMA0440_RS15355 QMA0440_RS15475 SM00420 helix_turn_helix, Deoxyribose operon repressor QMA0440_RS15475 SM01134 QMA0440_RS15475 QMA0440_RS15495 SM00869 Autotransporter beta-domain QMA0440_RS15565 SM00506 Appr-1"-p processing enzyme QMA0440_RS15620 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS15635 SM00487 DEAD-like helicases superfamily QMA0440_RS15635 SM00490 helicase superfamily c-terminal domain QMA0440_RS15650 SM00487 DEAD-like helicases superfamily QMA0440_RS15650 SM00490 helicase superfamily c-terminal domain QMA0440_RS15735 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS15740 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS15750 SM00072 Guanylate kinase homologues. QMA0440_RS15760 SM00859 Semialdehyde dehydrogenase, NAD binding domain QMA0440_RS15820 SM00487 DEAD-like helicases superfamily QMA0440_RS15820 SM00490 helicase superfamily c-terminal domain QMA0440_RS15825 SM00028 Tetratricopeptide repeats QMA0440_RS15830 SM00316 Ribosomal protein S1-like RNA-binding domain QMA0440_RS15830 SM00322 K homology RNA-binding domain QMA0440_RS15835 SM01387 QMA0440_RS15835 QMA0440_RS15855 SM00316 Ribosomal protein S1-like RNA-binding domain QMA0440_RS15855 SM00322 K homology RNA-binding domain QMA0440_RS15890 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS15900 SM01103 QMA0440_RS15900 QMA0440_RS15915 SM00448 cheY-homologous receiver domain QMA0440_RS15915 SM00862 Transcriptional regulatory protein, C terminal QMA0440_RS15920 SM00387 Histidine kinase-like ATPases QMA0440_RS15920 SM00388 His Kinase A (phosphoacceptor) domain QMA0440_RS16010 SM00116 Domain in cystathionine beta-synthase and other proteins. QMA0440_RS16010 SM01091 Transporter associated domain QMA0440_RS16125 SM00967 RNA 2'-O ribose methyltransferase substrate binding QMA0440_RS16130 SM00316 Ribosomal protein S1-like RNA-binding domain QMA0440_RS16130 SM00357 Cold shock protein domain QMA0440_RS16130 SM00955 QMA0440_RS16130 QMA0440_RS16140 SM00788 Adenylosuccinate synthetase QMA0440_RS16150 SM00244 prohibitin homologues QMA0440_RS16155 SM00244 prohibitin homologues QMA0440_RS16175 SM00853 MutL C terminal dimerisation domain QMA0440_RS16175 SM01340 QMA0440_RS16175 QMA0440_RS16180 SM00257 Lysin motif QMA0440_RS16180 SM00646 QMA0440_RS16180 QMA0440_RS16215 SM00479 QMA0440_RS16215 QMA0440_RS16290 SM00421 helix_turn_helix, Lux Regulon QMA0440_RS16300 SM00841 Elongation factor P, C-terminal QMA0440_RS16300 SM01185 QMA0440_RS16300 QMA0440_RS16320 SM00883 Chaperonin 10 Kd subunit QMA0440_RS16560 SM01060 QMA0440_RS16560 QMA0440_RS16565 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. QMA0440_RS16570 SM01004 Delta-aminolevulinic acid dehydratase QMA0440_RS16665 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS16715 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS16720 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS16770 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS16775 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS16775 SM00962 SRP54-type protein, GTPase domain QMA0440_RS16775 SM00963 SRP54-type protein, helical bundle domain QMA0440_RS16870 SM00341 Helicase and RNase D C-terminal QMA0440_RS16870 SM00487 DEAD-like helicases superfamily QMA0440_RS16870 SM00490 helicase superfamily c-terminal domain QMA0440_RS16870 SM00956 QMA0440_RS16870 QMA0440_RS16945 SM01219 QMA0440_RS16945 QMA0440_RS17045 SM00984 UDP binding domain QMA0440_RS17065 SM00357 Cold shock protein domain QMA0440_RS17065 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS17065 SM00959 Rho termination factor, N-terminal domain QMA0440_RS17075 SM00487 DEAD-like helicases superfamily QMA0440_RS17075 SM00490 helicase superfamily c-terminal domain QMA0440_RS17105 SM00495 Chitin-binding domain type 3 QMA0440_RS17105 SM01276 QMA0440_RS17105 QMA0440_RS17140 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS17265 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS17295 SM00859 Semialdehyde dehydrogenase, NAD binding domain QMA0440_RS17360 SM00487 DEAD-like helicases superfamily QMA0440_RS17360 SM00490 helicase superfamily c-terminal domain QMA0440_RS17365 SM00354 helix_turn _helix lactose operon repressor QMA0440_RS17380 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS17380 SM01086 C-terminal, D2-small domain, of ClpB protein QMA0440_RS17465 SM00448 cheY-homologous receiver domain QMA0440_RS17465 SM00862 Transcriptional regulatory protein, C terminal QMA0440_RS17470 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain QMA0440_RS17470 SM00387 Histidine kinase-like ATPases QMA0440_RS17470 SM00388 His Kinase A (phosphoacceptor) domain QMA0440_RS17480 SM00971 Serine acetyltransferase, N-terminal QMA0440_RS17500 SM00450 Rhodanese Homology Domain QMA0440_RS17520 SM00829 Enoylreductase QMA0440_RS17560 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain QMA0440_RS17560 SM01232 QMA0440_RS17560 QMA0440_RS17620 SM00052 Putative diguanylate phosphodiesterase QMA0440_RS17620 SM00091 PAS domain QMA0440_RS17620 SM00267 diguanylate cyclase QMA0440_RS17645 SM00532 Ligase N family QMA0440_RS17650 SM00072 Guanylate kinase homologues. QMA0440_RS17655 SM01409 QMA0440_RS17655 QMA0440_RS17660 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. QMA0440_RS17660 SM00954 Region found in RelA / SpoT proteins QMA0440_RS17670 SM00487 DEAD-like helicases superfamily QMA0440_RS17670 SM00490 helicase superfamily c-terminal domain QMA0440_RS17715 SM01230 QMA0440_RS17715 QMA0440_RS17725 SM00091 PAS domain QMA0440_RS17725 SM00387 Histidine kinase-like ATPases QMA0440_RS17725 SM00388 His Kinase A (phosphoacceptor) domain QMA0440_RS17730 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS17730 SM00448 cheY-homologous receiver domain QMA0440_RS17735 SM00729 Elongator protein 3, MiaB family, Radical SAM QMA0440_RS17755 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs QMA0440_RS17755 SM00474 3'-5' exonuclease QMA0440_RS17755 SM00475 5'-3' exonuclease QMA0440_RS17755 SM00482 DNA polymerase A domain QMA0440_RS17810 SM00345 helix_turn_helix gluconate operon transcriptional repressor QMA0440_RS17810 SM00895 QMA0440_RS17810 QMA0440_RS17815 SM00354 helix_turn _helix lactose operon repressor QMA0440_RS17835 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS17850 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS17855 SM00327 von Willebrand factor (vWF) type A domain QMA0440_RS17870 SM00344 helix_turn_helix ASNC type QMA0440_RS17885 SM01228 QMA0440_RS17885 QMA0440_RS17930 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS17965 SM00382 ATPases associated with a variety of cellular activities QMA0440_RS17975 SM00062 Bacterial periplasmic substrate-binding proteins QMA0440_RS17995 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). QMA0440_RS17995 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain QMA0440_RS18030 SM01234 QMA0440_RS18030