locus-tag class description NJ56_RS00005 PF09330 D-lactate dehydrogenase, membrane binding NJ56_RS00005 PF01565 FAD binding domain NJ56_RS00010 PF00768 D-alanyl-D-alanine carboxypeptidase NJ56_RS00020 PF01207 Dihydrouridine synthase (Dus) NJ56_RS00025 PF00270 DEAD/DEAH box helicase NJ56_RS00025 PF00271 Helicase conserved C-terminal domain NJ56_RS00030 PF00440 Bacterial regulatory proteins, tetR family NJ56_RS00030 PF09209 Tetracyclin repressor-like, C-terminal domain NJ56_RS00035 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NJ56_RS00040 PF00005 ABC transporter NJ56_RS00055 PF01027 Inhibitor of apoptosis-promoting Bax1 NJ56_RS00060 PF02391 MoaE protein NJ56_RS00065 PF02597 ThiS family NJ56_RS00070 PF01967 MoaC family NJ56_RS00075 PF04055 Radical SAM superfamily NJ56_RS00075 PF06463 Molybdenum Cofactor Synthesis C NJ56_RS00080 PF01933 Uncharacterised protein family UPF0052 NJ56_RS00085 PF00005 ABC transporter NJ56_RS00090 PF01032 FecCD transport family NJ56_RS00105 PF09905 DNA-binding protein VF530 NJ56_RS00110 PF02151 UvrB/uvrC motif NJ56_RS00110 PF12344 Ultra-violet resistance protein B NJ56_RS00110 PF17757 UvrB interaction domain NJ56_RS00110 PF00271 Helicase conserved C-terminal domain NJ56_RS00110 PF04851 Type III restriction enzyme, res subunit NJ56_RS00115 PF00005 ABC transporter NJ56_RS00125 PF08241 Methyltransferase domain NJ56_RS00130 PF00155 Aminotransferase class I and II NJ56_RS00135 PF04055 Radical SAM superfamily NJ56_RS00135 PF06968 Biotin and Thiamin Synthesis associated domain NJ56_RS00140 PF00202 Aminotransferase class-III NJ56_RS00145 PF10282 Lactonase, 7-bladed beta-propeller NJ56_RS00155 PF00005 ABC transporter NJ56_RS00155 PF03459 TOBE domain NJ56_RS00160 PF00528 Binding-protein-dependent transport system inner membrane component NJ56_RS00170 PF10766 Multidrug efflux pump-associated protein AcrZ NJ56_RS00175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NJ56_RS00175 PF03459 TOBE domain NJ56_RS00185 PF16363 GDP-mannose 4,6 dehydratase NJ56_RS00190 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain NJ56_RS00190 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain NJ56_RS00195 PF00288 GHMP kinases N terminal domain NJ56_RS00195 PF10509 Galactokinase galactose-binding signature NJ56_RS00195 PF08544 GHMP kinases C terminal NJ56_RS00200 PF01263 Aldose 1-epimerase NJ56_RS00210 PF00300 Histidine phosphatase superfamily (branch 1) NJ56_RS00215 PF00793 DAHP synthetase I family NJ56_RS00220 PF00196 Bacterial regulatory proteins, luxR family NJ56_RS00220 PF00072 Response regulator receiver domain NJ56_RS00225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NJ56_RS00225 PF00497 Bacterial extracellular solute-binding proteins, family 3 NJ56_RS00225 PF00072 Response regulator receiver domain NJ56_RS00225 PF00512 His Kinase A (phospho-acceptor) domain NJ56_RS00225 PF01627 Hpt domain NJ56_RS00225 PF00989 PAS fold NJ56_RS00230 PF04973 Nicotinamide mononucleotide transporter NJ56_RS00235 PF02445 Quinolinate synthetase A protein NJ56_RS00270 PF13174 Tetratricopeptide repeat NJ56_RS00270 PF16331 TolA binding protein trimerisation NJ56_RS00275 PF00691 OmpA family NJ56_RS00280 PF07676 WD40-like Beta Propeller Repeat NJ56_RS00280 PF04052 TolB amino-terminal domain NJ56_RS00285 PF06519 TolA C-terminal NJ56_RS00285 PF06519 TolA C-terminal NJ56_RS00290 PF02472 Biopolymer transport protein ExbD/TolR NJ56_RS00295 PF01618 MotA/TolQ/ExbB proton channel family NJ56_RS00300 PF03061 Thioesterase superfamily NJ56_RS00305 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) NJ56_RS00310 PF08173 Membrane bound YbgT-like protein NJ56_RS00315 PF02322 Cytochrome bd terminal oxidase subunit II NJ56_RS00320 PF01654 Cytochrome bd terminal oxidase subunit I NJ56_RS00325 PF00149 Calcineurin-like phosphoesterase NJ56_RS00325 PF02872 5'-nucleotidase, C-terminal domain NJ56_RS00330 PF00549 CoA-ligase NJ56_RS00330 PF02629 CoA binding domain NJ56_RS00335 PF00549 CoA-ligase NJ56_RS00335 PF08442 ATP-grasp domain NJ56_RS00340 PF02817 e3 binding domain NJ56_RS00340 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NJ56_RS00340 PF00364 Biotin-requiring enzyme NJ56_RS00345 PF00676 Dehydrogenase E1 component NJ56_RS00345 PF16078 2-oxoglutarate dehydrogenase N-terminus NJ56_RS00345 PF16870 2-oxoglutarate dehydrogenase C-terminal NJ56_RS00345 PF02779 Transketolase, pyrimidine binding domain NJ56_RS00350 PF13085 2Fe-2S iron-sulfur cluster binding domain NJ56_RS00355 PF02910 Fumarate reductase flavoprotein C-term NJ56_RS00355 PF00890 FAD binding domain NJ56_RS00360 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NJ56_RS00365 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NJ56_RS00370 PF00285 Citrate synthase, C-terminal domain NJ56_RS00380 PF01470 Pyroglutamyl peptidase NJ56_RS00395 PF03746 LamB/YcsF family NJ56_RS00400 PF02626 Carboxyltransferase domain, subdomain A and B NJ56_RS00405 PF02682 Carboxyltransferase domain, subdomain C and D NJ56_RS00410 PF01784 NIF3 (NGG1p interacting factor 3) NJ56_RS00415 PF02112 cAMP phosphodiesterases class-II NJ56_RS00420 PF00875 DNA photolyase NJ56_RS00420 PF03441 FAD binding domain of DNA photolyase NJ56_RS00425 PF08349 Protein of unknown function (DUF1722) NJ56_RS00430 PF10725 Protein of unknown function (DUF2517) NJ56_RS00435 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) NJ56_RS00440 PF03814 Potassium-transporting ATPase A subunit NJ56_RS00450 PF02669 K+-transporting ATPase, c chain NJ56_RS00455 PF00512 His Kinase A (phospho-acceptor) domain NJ56_RS00455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NJ56_RS00455 PF02702 Osmosensitive K+ channel His kinase sensor domain NJ56_RS00455 PF13492 GAF domain NJ56_RS00455 PF13493 Domain of unknown function (DUF4118) NJ56_RS00460 PF00072 Response regulator receiver domain NJ56_RS00460 PF00486 Transcriptional regulatory protein, C terminal NJ56_RS00470 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NJ56_RS00470 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NJ56_RS00470 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NJ56_RS00470 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NJ56_RS00475 PF17206 SeqA protein N-terminal domain NJ56_RS00475 PF03925 SeqA protein C-terminal domain NJ56_RS00480 PF12697 Alpha/beta hydrolase family NJ56_RS00485 PF01402 Ribbon-helix-helix protein, copG family NJ56_RS00490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NJ56_RS00490 PF00672 HAMP domain NJ56_RS00490 PF02203 Tar ligand binding domain homologue NJ56_RS00495 PF00258 Flavodoxin NJ56_RS00500 PF01475 Ferric uptake regulator family NJ56_RS00505 PF02838 Glycosyl hydrolase family 20, domain 2 NJ56_RS00505 PF00728 Glycosyl hydrolase family 20, catalytic domain NJ56_RS00505 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain NJ56_RS00505 PF03173 Putative carbohydrate binding domain NJ56_RS00510 PF13982 YbfN-like lipoprotein NJ56_RS00515 PF03573 outer membrane porin, OprD family NJ56_RS00520 PF00749 tRNA synthetases class I (E and Q), catalytic domain NJ56_RS00520 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain NJ56_RS00525 PF00367 phosphotransferase system, EIIB NJ56_RS00525 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NJ56_RS00525 PF02378 Phosphotransferase system, EIIC NJ56_RS00530 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase NJ56_RS00535 PF01979 Amidohydrolase family NJ56_RS00540 PF01047 MarR family NJ56_RS00540 PF00480 ROK family NJ56_RS00545 PF13344 Haloacid dehalogenase-like hydrolase NJ56_RS00550 PF00733 Asparagine synthase NJ56_RS00550 PF13537 Glutamine amidotransferase domain NJ56_RS00585 PF01494 FAD binding domain NJ56_RS00590 PF01938 TRAM domain NJ56_RS00590 PF00919 Uncharacterized protein family UPF0004 NJ56_RS00590 PF04055 Radical SAM superfamily NJ56_RS00595 PF02562 PhoH-like protein NJ56_RS00600 PF02130 Uncharacterized protein family UPF0054 NJ56_RS00605 PF03471 Transporter associated domain NJ56_RS00605 PF00571 CBS domain NJ56_RS00610 PF00795 Carbon-nitrogen hydrolase NJ56_RS00620 PF00497 Bacterial extracellular solute-binding proteins, family 3 NJ56_RS00625 PF00528 Binding-protein-dependent transport system inner membrane component NJ56_RS00630 PF00528 Binding-protein-dependent transport system inner membrane component NJ56_RS00635 PF00005 ABC transporter NJ56_RS00640 PF07295 Zinc-ribbon containing domain NJ56_RS00645 PF00133 tRNA synthetases class I (I, L, M and V) NJ56_RS00645 PF13603 Leucyl-tRNA synthetase, Domain 2 NJ56_RS00645 PF08264 Anticodon-binding domain of tRNA NJ56_RS00650 PF04390 Lipopolysaccharide-assembly NJ56_RS00655 PF14840 Processivity clamp loader gamma complex DNA pol III C-term NJ56_RS00655 PF06144 DNA polymerase III, delta subunit NJ56_RS00660 PF01467 Cytidylyltransferase-like NJ56_RS00670 PF02590 Predicted SPOUT methyltransferase NJ56_RS00675 PF00905 Penicillin binding protein transpeptidase domain NJ56_RS00675 PF03717 Penicillin-binding Protein dimerisation domain NJ56_RS00680 PF01098 Cell cycle protein NJ56_RS00685 PF05036 Sporulation related domain NJ56_RS00685 PF03330 Lytic transglycolase NJ56_RS00690 PF00768 D-alanyl-D-alanine carboxypeptidase NJ56_RS00690 PF07943 Penicillin-binding protein 5, C-terminal domain NJ56_RS00695 PF04359 Protein of unknown function (DUF493) NJ56_RS00700 PF03099 Biotin/lipoate A/B protein ligase family NJ56_RS00705 PF04055 Radical SAM superfamily NJ56_RS00705 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family NJ56_RS00710 PF02416 mttA/Hcf106 family NJ56_RS00715 PF00990 Diguanylate cyclase, GGDEF domain NJ56_RS00715 PF05230 MASE2 domain NJ56_RS00725 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NJ56_RS00730 PF00313 'Cold-shock' DNA-binding domain NJ56_RS00735 PF00313 'Cold-shock' DNA-binding domain NJ56_RS00740 PF00196 Bacterial regulatory proteins, luxR family NJ56_RS00765 PF00440 Bacterial regulatory proteins, tetR family NJ56_RS00770 PF00072 Response regulator receiver domain NJ56_RS00770 PF00990 Diguanylate cyclase, GGDEF domain NJ56_RS00775 PF00672 HAMP domain NJ56_RS00775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NJ56_RS00775 PF00512 His Kinase A (phospho-acceptor) domain NJ56_RS00775 PF01627 Hpt domain NJ56_RS00775 PF00072 Response regulator receiver domain NJ56_RS00775 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NJ56_RS00780 PF00703 Glycosyl hydrolases family 2 NJ56_RS00780 PF16355 Domain of unknown function (DUF4982) NJ56_RS00780 PF02837 Glycosyl hydrolases family 2, sugar binding domain NJ56_RS00780 PF02836 Glycosyl hydrolases family 2, TIM barrel domain NJ56_RS00800 PF00535 Glycosyl transferase family 2 NJ56_RS00800 PF03552 Cellulose synthase NJ56_RS00800 PF07238 PilZ domain NJ56_RS00810 PF00483 Nucleotidyl transferase NJ56_RS00820 PF00486 Transcriptional regulatory protein, C terminal NJ56_RS00820 PF00072 Response regulator receiver domain NJ56_RS00830 PF00343 Carbohydrate phosphorylase NJ56_RS00840 PF01292 Prokaryotic cytochrome b561 NJ56_RS00865 PF00501 AMP-binding enzyme NJ56_RS00875 PF03960 ArsC family NJ56_RS00880 PF02040 Arsenical pump membrane protein NJ56_RS00885 PF01022 Bacterial regulatory protein, arsR family NJ56_RS00910 PF13276 HTH-like domain NJ56_RS00910 PF13683 Integrase core domain NJ56_RS00920 PF13276 HTH-like domain NJ56_RS00920 PF13683 Integrase core domain NJ56_RS00925 PF00589 Phage integrase family NJ56_RS00935 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NJ56_RS00935 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NJ56_RS00970 PF02753 Pili assembly chaperone PapD, C-terminal domain NJ56_RS00970 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain NJ56_RS00975 PF00577 Outer membrane usher protein NJ56_RS00975 PF13954 PapC N-terminal domain NJ56_RS00975 PF13953 PapC C-terminal domain NJ56_RS00980 PF00419 Fimbrial protein NJ56_RS00995 PF01406 tRNA synthetases class I (C) catalytic domain NJ56_RS00995 PF09190 DALR domain NJ56_RS01000 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NJ56_RS01005 PF00149 Calcineurin-like phosphoesterase NJ56_RS01010 PF00731 AIR carboxylase NJ56_RS01015 PF02222 ATP-grasp domain NJ56_RS01015 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain NJ56_RS01025 PF00005 ABC transporter NJ56_RS01030 PF13472 GDSL-like Lipase/Acylhydrolase family NJ56_RS01035 PF00106 short chain dehydrogenase NJ56_RS01040 PF00085 Thioredoxin NJ56_RS01045 PF01145 SPFH domain / Band 7 family NJ56_RS01045 PF16200 C-terminal region of band_7 NJ56_RS01050 PF01957 NfeD-like C-terminal, partner-binding NJ56_RS01055 PF13411 MerR HTH family regulatory protein NJ56_RS01060 PF00403 Heavy-metal-associated domain NJ56_RS01065 PF01963 TraB family NJ56_RS01070 PF04073 Aminoacyl-tRNA editing domain NJ56_RS01075 PF02872 5'-nucleotidase, C-terminal domain NJ56_RS01075 PF00149 Calcineurin-like phosphoesterase NJ56_RS01080 PF00999 Sodium/hydrogen exchanger family NJ56_RS01080 PF02254 TrkA-N domain NJ56_RS01085 PF00294 pfkB family carbohydrate kinase NJ56_RS01090 PF02706 Chain length determinant protein NJ56_RS01105 PF02350 UDP-N-acetylglucosamine 2-epimerase NJ56_RS01110 PF01370 NAD dependent epimerase/dehydratase family NJ56_RS01115 PF08485 Polysaccharide biosynthesis protein C-terminal NJ56_RS01115 PF02719 Polysaccharide biosynthesis protein NJ56_RS01120 PF00534 Glycosyl transferases group 1 NJ56_RS01145 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase NJ56_RS01150 PF16363 GDP-mannose 4,6 dehydratase NJ56_RS01155 PF00483 Nucleotidyl transferase NJ56_RS01165 PF00762 Ferrochelatase NJ56_RS01170 PF05191 Adenylate kinase, active site lid NJ56_RS01175 PF00183 Hsp90 protein NJ56_RS01175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NJ56_RS01180 PF02132 RecR protein NJ56_RS01180 PF13662 Toprim domain NJ56_RS01185 PF02575 YbaB/EbfC DNA-binding family NJ56_RS01190 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding NJ56_RS01190 PF12170 DNA polymerase III tau subunit V interacting with alpha NJ56_RS01190 PF12169 DNA polymerase III subunits gamma and tau domain III NJ56_RS01195 PF00512 His Kinase A (phospho-acceptor) domain NJ56_RS01195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NJ56_RS01200 PF00072 Response regulator receiver domain NJ56_RS01200 PF00486 Transcriptional regulatory protein, C terminal NJ56_RS01215 PF01970 Tripartite tricarboxylate transporter TctA family NJ56_RS01220 PF00156 Phosphoribosyl transferase domain NJ56_RS01225 PF04304 Protein of unknown function (DUF454) NJ56_RS01235 PF10689 Protein of unknown function (DUF2496) NJ56_RS01240 PF12794 Mechanosensitive ion channel inner membrane domain 1 NJ56_RS01240 PF00924 Mechanosensitive ion channel NJ56_RS01240 PF12795 Mechanosensitive ion channel porin domain NJ56_RS01245 PF02635 DsrE/DsrF-like family NJ56_RS01250 PF08361 MAATS-type transcriptional repressor, C-terminal region NJ56_RS01250 PF00440 Bacterial regulatory proteins, tetR family NJ56_RS01255 PF00529 HlyD membrane-fusion protein of T1SS NJ56_RS01255 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NJ56_RS01260 PF00873 AcrB/AcrD/AcrF family NJ56_RS01265 PF01197 Ribosomal protein L31 NJ56_RS01270 PF00444 Ribosomal protein L36 NJ56_RS01280 PF10757 Biofilm formation regulator YbaJ NJ56_RS01285 PF05321 Haemolysin expression modulating protein NJ56_RS01295 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NJ56_RS01305 PF00909 Ammonium Transporter Family NJ56_RS01310 PF00543 Nitrogen regulatory protein P-II NJ56_RS01315 PF00664 ABC transporter transmembrane region NJ56_RS01315 PF00005 ABC transporter NJ56_RS01320 PF00005 ABC transporter NJ56_RS01320 PF00664 ABC transporter transmembrane region NJ56_RS01325 PF01037 Lrp/AsnC ligand binding domain NJ56_RS01325 PF13404 AsnC-type helix-turn-helix domain NJ56_RS01340 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NJ56_RS01340 PF12793 Sugar transport-related sRNA regulator N-term NJ56_RS01345 PF06508 Queuosine biosynthesis protein QueC NJ56_RS01360 PF13145 PPIC-type PPIASE domain NJ56_RS01365 PF00216 Bacterial DNA-binding protein NJ56_RS01370 PF00004 ATPase family associated with various cellular activities (AAA) NJ56_RS01370 PF05362 Lon protease (S16) C-terminal proteolytic domain NJ56_RS01370 PF02190 ATP-dependent protease La (LON) substrate-binding domain NJ56_RS01375 PF07724 AAA domain (Cdc48 subfamily) NJ56_RS01375 PF06689 ClpX C4-type zinc finger NJ56_RS01375 PF10431 C-terminal, D2-small domain, of ClpB protein NJ56_RS01380 PF00574 Clp protease NJ56_RS01385 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NJ56_RS01385 PF05697 Bacterial trigger factor protein (TF) NJ56_RS01385 PF05698 Bacterial trigger factor protein (TF) C-terminus NJ56_RS01395 PF01722 BolA-like protein NJ56_RS01400 PF03923 Uncharacterized lipoprotein NJ56_RS01400 PF08139 Prokaryotic membrane lipoprotein lipid attachment site NJ56_RS01405 PF07690 Major Facilitator Superfamily NJ56_RS01410 PF03502 Nucleoside-specific channel-forming protein, Tsx NJ56_RS01415 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NJ56_RS01415 PF06481 COX Aromatic Rich Motif NJ56_RS01420 PF00115 Cytochrome C and Quinol oxidase polypeptide I NJ56_RS01425 PF00510 Cytochrome c oxidase subunit III NJ56_RS01430 PF03626 Prokaryotic Cytochrome C oxidase subunit IV NJ56_RS01435 PF01040 UbiA prenyltransferase family NJ56_RS01440 PF07690 Major Facilitator Superfamily NJ56_RS01445 PF04461 Protein of unknown function (DUF520) NJ56_RS01450 PF02558 Ketopantoate reductase PanE/ApbA NJ56_RS01450 PF08546 Ketopantoate reductase PanE/ApbA C terminal NJ56_RS01455 PF01965 DJ-1/PfpI family NJ56_RS01460 PF07690 Major Facilitator Superfamily NJ56_RS01470 PF00672 HAMP domain NJ56_RS01470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NJ56_RS01470 PF00512 His Kinase A (phospho-acceptor) domain NJ56_RS01475 PF14532 Sigma-54 interaction domain NJ56_RS01475 PF00072 Response regulator receiver domain NJ56_RS01475 PF02954 Bacterial regulatory protein, Fis family NJ56_RS01480 PF02568 Thiamine biosynthesis protein (ThiI) NJ56_RS01480 PF02926 THUMP domain NJ56_RS01485 PF02609 Exonuclease VII small subunit NJ56_RS01490 PF00348 Polyprenyl synthetase NJ56_RS01495 PF02780 Transketolase, C-terminal domain NJ56_RS01495 PF02779 Transketolase, pyrimidine binding domain NJ56_RS01495 PF13292 1-deoxy-D-xylulose-5-phosphate synthase NJ56_RS01500 PF04608 Phosphatidylglycerophosphatase A NJ56_RS01505 PF00586 AIR synthase related protein, N-terminal domain NJ56_RS01505 PF02769 AIR synthase related protein, C-terminal domain NJ56_RS01510 PF01029 NusB family NJ56_RS01515 PF00885 6,7-dimethyl-8-ribityllumazine synthase NJ56_RS01520 PF01872 RibD C-terminal domain NJ56_RS01520 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NJ56_RS01525 PF03477 ATP cone domain NJ56_RS01530 PF02355 Protein export membrane protein NJ56_RS01530 PF07549 SecD/SecF GG Motif NJ56_RS01535 PF07549 SecD/SecF GG Motif NJ56_RS01535 PF13721 SecD export protein N-terminal TM region NJ56_RS01535 PF02355 Protein export membrane protein NJ56_RS01540 PF02699 Preprotein translocase subunit NJ56_RS01545 PF01702 Queuine tRNA-ribosyltransferase NJ56_RS01550 PF02547 Queuosine biosynthesis protein NJ56_RS01555 PF04336 Acyl carrier protein phosphodiesterase NJ56_RS01560 PF00578 AhpC/TSA family NJ56_RS01560 PF10417 C-terminal domain of 1-Cys peroxiredoxin NJ56_RS01570 PF00128 Alpha amylase, catalytic domain NJ56_RS01570 PF02903 Alpha amylase, N-terminal ig-like domain NJ56_RS01575 PF00324 Amino acid permease NJ56_RS01580 PF05525 Branched-chain amino acid transport protein NJ56_RS01585 PF12849 PBP superfamily domain NJ56_RS01590 PF11808 Phosphate regulon sensor protein PhoR NJ56_RS01590 PF00989 PAS fold NJ56_RS01590 PF00512 His Kinase A (phospho-acceptor) domain NJ56_RS01590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NJ56_RS01595 PF00072 Response regulator receiver domain NJ56_RS01595 PF00486 Transcriptional regulatory protein, C terminal NJ56_RS01600 PF12320 Type 5 capsule protein repressor C-terminal domain NJ56_RS01600 PF00149 Calcineurin-like phosphoesterase NJ56_RS01605 PF13476 AAA domain NJ56_RS01610 PF00480 ROK family NJ56_RS01615 PF04381 Putative exonuclease, RdgC NJ56_RS01620 PF06865 Pyrimidine/purine nucleoside phosphorylase NJ56_RS01625 PF07302 AroM protein NJ56_RS01645 PF01202 Shikimate kinase NJ56_RS01650 PF07715 TonB-dependent Receptor Plug Domain NJ56_RS01650 PF00593 TonB dependent receptor NJ56_RS01675 PF07317 Flagellar regulator YcgR NJ56_RS01675 PF07238 PilZ domain NJ56_RS01680 PF00171 Aldehyde dehydrogenase family NJ56_RS01685 PF00696 Amino acid kinase family NJ56_RS01685 PF01472 PUA domain NJ56_RS01690 PF07417 Sigma factor-binding transcriptional regulator Crl NJ56_RS01695 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) NJ56_RS01700 PF00156 Phosphoribosyl transferase domain NJ56_RS01705 PF01546 Peptidase family M20/M25/M40 NJ56_RS01705 PF07687 Peptidase dimerisation domain NJ56_RS01710 PF11798 IMS family HHH motif NJ56_RS01710 PF11799 impB/mucB/samB family C-terminal domain NJ56_RS01710 PF00817 impB/mucB/samB family NJ56_RS01715 PF03009 Glycerophosphoryl diester phosphodiesterase family NJ56_RS01720 PF04400 (Na+)-NQR maturation NqrM NJ56_RS01725 PF02424 ApbE family NJ56_RS01730 PF00175 Oxidoreductase NAD-binding domain NJ56_RS01730 PF00970 Oxidoreductase FAD-binding domain NJ56_RS01730 PF00111 2Fe-2S iron-sulfur cluster binding domain NJ56_RS01735 PF02508 Rnf-Nqr subunit, membrane protein NJ56_RS01740 PF02508 Rnf-Nqr subunit, membrane protein NJ56_RS01745 PF04205 FMN-binding domain NJ56_RS01750 PF03116 NQR2, RnfD, RnfE family NJ56_RS01755 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) NJ56_RS01755 PF11973 NQRA C-terminal domain NJ56_RS01760 PF03734 L,D-transpeptidase catalytic domain NJ56_RS01765 PF13230 Glutamine amidotransferases class-II NJ56_RS01770 PF13580 SIS domain NJ56_RS01775 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NJ56_RS01775 PF09317 Domain of unknown function (DUF1974) NJ56_RS01775 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NJ56_RS01785 PF00929 Exonuclease NJ56_RS01790 PF00075 RNase H NJ56_RS01795 PF08241 Methyltransferase domain NJ56_RS01800 PF16123 Hydroxyacylglutathione hydrolase C-terminus NJ56_RS01800 PF00753 Metallo-beta-lactamase superfamily NJ56_RS01805 PF01476 LysM domain NJ56_RS01805 PF01464 Transglycosylase SLT domain NJ56_RS01810 PF03372 Endonuclease/Exonuclease/phosphatase family NJ56_RS01845 PF02861 Clp amino terminal domain, pathogenicity island component NJ56_RS01845 PF17871 AAA lid domain NJ56_RS01845 PF07724 AAA domain (Cdc48 subfamily) NJ56_RS01845 PF10431 C-terminal, D2-small domain, of ClpB protein NJ56_RS01845 PF00004 ATPase family associated with various cellular activities (AAA) NJ56_RS01850 PF02578 Multi-copper polyphenol oxidoreductase laccase NJ56_RS01855 PF00849 RNA pseudouridylate synthase NJ56_RS01855 PF01479 S4 domain NJ56_RS01865 PF13525 Outer membrane lipoprotein NJ56_RS01870 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein NJ56_RS01875 PF01817 Chorismate mutase type II NJ56_RS01875 PF00800 Prephenate dehydratase NJ56_RS01880 PF02153 Prephenate dehydrogenase NJ56_RS01880 PF01817 Chorismate mutase type II NJ56_RS01885 PF00793 DAHP synthetase I family NJ56_RS01890 PF04397 LytTr DNA-binding domain NJ56_RS01890 PF00072 Response regulator receiver domain NJ56_RS01895 PF03605 Anaerobic c4-dicarboxylate membrane transporter NJ56_RS01900 PF04338 Protein of unknown function, DUF481 NJ56_RS01905 PF01245 Ribosomal protein L19 NJ56_RS01910 PF01746 tRNA (Guanine-1)-methyltransferase NJ56_RS01915 PF05239 PRC-barrel domain NJ56_RS01915 PF01782 RimM N-terminal domain NJ56_RS01920 PF00886 Ribosomal protein S16 NJ56_RS01925 PF02978 Signal peptide binding domain NJ56_RS01925 PF02881 SRP54-type protein, helical bundle domain NJ56_RS01925 PF00448 SRP54-type protein, GTPase domain NJ56_RS01930 PF01578 Cytochrome C assembly protein NJ56_RS01935 PF00571 CBS domain NJ56_RS01935 PF03471 Transporter associated domain NJ56_RS01935 PF01595 Cyclin M transmembrane N-terminal domain NJ56_RS01940 PF02664 S-Ribosylhomocysteinase (LuxS) NJ56_RS01945 PF04262 Glutamate-cysteine ligase NJ56_RS01950 PF09335 SNARE associated Golgi protein NJ56_RS01955 PF13419 Haloacid dehalogenase-like hydrolase NJ56_RS01980 PF02599 Global regulator protein family NJ56_RS01985 PF02272 DHHA1 domain NJ56_RS01985 PF01411 tRNA synthetases class II (A) NJ56_RS01985 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NJ56_RS01990 PF02631 RecX family NJ56_RS01995 PF00154 recA bacterial DNA recombination protein NJ56_RS02000 PF02464 Competence-damaged protein NJ56_RS02005 PF07690 Major Facilitator Superfamily NJ56_RS02010 PF05681 Fumarate hydratase (Fumerase) NJ56_RS02010 PF05683 Fumarase C-terminus NJ56_RS02035 PF11356 Type II secretion system protein C NJ56_RS02040 PF03958 Bacterial type II/III secretion system short domain NJ56_RS02040 PF00263 Bacterial type II and III secretion system protein NJ56_RS02045 PF00437 Type II/IV secretion system protein NJ56_RS02050 PF00482 Type II secretion system (T2SS), protein F NJ56_RS02055 PF08334 Type II secretion system (T2SS), protein G NJ56_RS02055 PF07963 Prokaryotic N-terminal methylation motif NJ56_RS02060 PF12019 Type II transport protein GspH NJ56_RS02060 PF07963 Prokaryotic N-terminal methylation motif NJ56_RS02065 PF07963 Prokaryotic N-terminal methylation motif NJ56_RS02065 PF02501 Type II secretion system (T2SS), protein I NJ56_RS02070 PF11612 Type II secretion system (T2SS), protein J NJ56_RS02070 PF07963 Prokaryotic N-terminal methylation motif NJ56_RS02075 PF03934 Type II secretion system (T2SS), protein K NJ56_RS02080 PF12693 GspL periplasmic domain NJ56_RS02080 PF05134 Type II secretion system (T2SS), protein L NJ56_RS02090 PF01478 Type IV leader peptidase family NJ56_RS02090 PF06750 Bacterial Peptidase A24 N-terminal domain NJ56_RS02095 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) NJ56_RS02100 PF18416 N-acetylglucosamine binding protein domain 2 NJ56_RS02100 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading NJ56_RS02120 PF00550 Phosphopantetheine attachment site NJ56_RS02145 PF07720 Tetratricopeptide repeat NJ56_RS02150 PF01312 FlhB HrpN YscU SpaS Family NJ56_RS02155 PF01311 Bacterial export proteins, family 1 NJ56_RS02160 PF01313 Bacterial export proteins, family 3 NJ56_RS02165 PF00813 FliP family NJ56_RS02170 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NJ56_RS02185 PF18269 T3SS EscN ATPase C-terminal domain NJ56_RS02185 PF02874 ATP synthase alpha/beta family, beta-barrel domain NJ56_RS02185 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NJ56_RS02195 PF00771 FHIPEP family NJ56_RS02200 PF07201 HrpJ-like domain NJ56_RS02205 PF03958 Bacterial type II/III secretion system short domain NJ56_RS02205 PF00263 Bacterial type II and III secretion system protein NJ56_RS02210 PF12833 Helix-turn-helix domain NJ56_RS02230 PF01514 Secretory protein of YscJ/FliF family NJ56_RS02250 PF01464 Transglycosylase SLT domain NJ56_RS02265 PF00072 Response regulator receiver domain NJ56_RS02265 PF00196 Bacterial regulatory proteins, luxR family NJ56_RS02270 PF00072 Response regulator receiver domain NJ56_RS02270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NJ56_RS02270 PF00512 His Kinase A (phospho-acceptor) domain NJ56_RS02270 PF09308 LuxQ, periplasmic NJ56_RS02280 PF05190 MutS family domain IV NJ56_RS02280 PF05192 MutS domain III NJ56_RS02280 PF05188 MutS domain II NJ56_RS02280 PF01624 MutS domain I NJ56_RS02280 PF00488 MutS domain V NJ56_RS02285 PF04542 Sigma-70 region 2 NJ56_RS02285 PF00140 Sigma-70 factor, region 1.2 NJ56_RS02285 PF04539 Sigma-70 region 3 NJ56_RS02285 PF04545 Sigma-70, region 4 NJ56_RS02290 PF01476 LysM domain NJ56_RS02290 PF01551 Peptidase family M23 NJ56_RS02300 PF01975 Survival protein SurE NJ56_RS02305 PF01142 tRNA pseudouridine synthase D (TruD) NJ56_RS02310 PF02542 YgbB family NJ56_RS02315 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NJ56_RS02320 PF04977 Septum formation initiator NJ56_RS02325 PF12084 Protein of unknown function (DUF3561) NJ56_RS02335 PF00009 Elongation factor Tu GTP binding domain NJ56_RS02340 PF01507 Phosphoadenosine phosphosulfate reductase family NJ56_RS02345 PF14824 Sirohaem biosynthesis protein central NJ56_RS02345 PF10414 Sirohaem synthase dimerisation region NJ56_RS02345 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NJ56_RS02350 PF04389 Peptidase family M28 NJ56_RS02365 PF01507 Phosphoadenosine phosphosulfate reductase family NJ56_RS02370 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NJ56_RS02370 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NJ56_RS02375 PF00175 Oxidoreductase NAD-binding domain NJ56_RS02375 PF00667 FAD binding domain NJ56_RS02375 PF00258 Flavodoxin NJ56_RS02380 PF01242 6-pyruvoyl tetrahydropterin synthase NJ56_RS02385 PF04055 Radical SAM superfamily NJ56_RS02390 PF03952 Enolase, N-terminal domain NJ56_RS02390 PF00113 Enolase, C-terminal TIM barrel domain NJ56_RS02395 PF00117 Glutamine amidotransferase class-I NJ56_RS02395 PF06418 CTP synthase N-terminus NJ56_RS02400 PF03819 MazG nucleotide pyrophosphohydrolase domain NJ56_RS02405 PF02824 TGS domain NJ56_RS02405 PF04607 Region found in RelA / SpoT proteins NJ56_RS02405 PF13291 ACT domain NJ56_RS02410 PF01938 TRAM domain NJ56_RS02410 PF05958 tRNA (Uracil-5-)-methyltransferase NJ56_RS02415 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NJ56_RS02415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NJ56_RS02415 PF01627 Hpt domain NJ56_RS02415 PF00072 Response regulator receiver domain NJ56_RS02415 PF00672 HAMP domain NJ56_RS02415 PF00512 His Kinase A (phospho-acceptor) domain NJ56_RS02420 PF00595 PDZ domain NJ56_RS02425 PF01966 HD domain NJ56_RS02425 PF13286 Phosphohydrolase-associated domain NJ56_RS02430 PF01048 Phosphorylase superfamily NJ56_RS02435 PF01497 Periplasmic binding protein NJ56_RS02440 PF03458 UPF0126 domain NJ56_RS02445 PF01521 Iron-sulphur cluster biosynthesis NJ56_RS02450 PF00654 Voltage gated chloride channel NJ56_RS02455 PF00202 Aminotransferase class-III NJ56_RS02460 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal NJ56_RS02460 PF14814 Bifunctional transglycosylase second domain NJ56_RS02460 PF00912 Transglycosylase NJ56_RS02460 PF00905 Penicillin binding protein transpeptidase domain NJ56_RS02465 PF00270 DEAD/DEAH box helicase NJ56_RS02465 PF08482 ATP-dependent helicase C-terminal NJ56_RS02465 PF04408 Helicase associated domain (HA2) NJ56_RS02465 PF00271 Helicase conserved C-terminal domain NJ56_RS02470 PF02834 LigT like Phosphoesterase NJ56_RS02475 PF17746 SfsA N-terminal OB domain NJ56_RS02475 PF03749 Sugar fermentation stimulation protein RE domain NJ56_RS02485 PF01258 Prokaryotic dksA/traR C4-type zinc finger NJ56_RS02490 PF00749 tRNA synthetases class I (E and Q), catalytic domain NJ56_RS02495 PF01743 Poly A polymerase head domain NJ56_RS02495 PF12626 Polymerase A arginine-rich C-terminus NJ56_RS02495 PF12627 Probable RNA and SrmB- binding site of polymerase A NJ56_RS02500 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NJ56_RS02505 PF02548 Ketopantoate hydroxymethyltransferase NJ56_RS02510 PF02569 Pantoate-beta-alanine ligase NJ56_RS02515 PF02261 Aspartate decarboxylase NJ56_RS02520 PF01522 Polysaccharide deacetylase NJ56_RS02525 PF01061 ABC-2 type transporter NJ56_RS02530 PF00005 ABC transporter NJ56_RS02535 PF00484 Carbonic anhydrase NJ56_RS02540 PF00156 Phosphoribosyl transferase domain NJ56_RS02545 PF10518 TAT (twin-arginine translocation) pathway signal sequence NJ56_RS02545 PF07731 Multicopper oxidase NJ56_RS02545 PF07732 Multicopper oxidase NJ56_RS02545 PF00394 Multicopper oxidase NJ56_RS02550 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) NJ56_RS02555 PF17284 Spermidine synthase tetramerisation domain NJ56_RS02560 PF02675 S-adenosylmethionine decarboxylase NJ56_RS02565 PF00892 EamA-like transporter family NJ56_RS02570 PF06062 Uncharacterised protein family (UPF0231) NJ56_RS02575 PF06434 Aconitate hydratase 2 N-terminus NJ56_RS02575 PF11791 Aconitate B N-terminal domain NJ56_RS02575 PF00330 Aconitase family (aconitate hydratase) NJ56_RS02585 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NJ56_RS02585 PF07992 Pyridine nucleotide-disulphide oxidoreductase NJ56_RS02590 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NJ56_RS02590 PF00364 Biotin-requiring enzyme NJ56_RS02590 PF02817 e3 binding domain NJ56_RS02595 PF00456 Transketolase, thiamine diphosphate binding domain NJ56_RS02595 PF17831 Pyruvate dehydrogenase E1 component middle domain NJ56_RS02600 PF00392 Bacterial regulatory proteins, gntR family NJ56_RS02600 PF07729 FCD domain NJ56_RS02610 PF00324 Amino acid permease NJ56_RS02615 PF17113 Regulatory signalling modulator protein AmpE NJ56_RS02620 PF01510 N-acetylmuramoyl-L-alanine amidase NJ56_RS02625 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain NJ56_RS02625 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain NJ56_RS02630 PF07963 Prokaryotic N-terminal methylation motif NJ56_RS02635 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NJ56_RS02635 PF00437 Type II/IV secretion system protein NJ56_RS02640 PF00482 Type II secretion system (T2SS), protein F NJ56_RS02645 PF00478 IMP dehydrogenase / GMP reductase domain NJ56_RS02650 PF01121 Dephospho-CoA kinase NJ56_RS02655 PF07072 Cell division protein NJ56_RS02660 PF03884 DNA gyrase inhibitor YacG NJ56_RS02665 PF00293 NUDIX domain NJ56_RS02670 PF02810 SEC-C motif NJ56_RS02670 PF07516 SecA Wing and Scaffold domain NJ56_RS02670 PF07517 SecA DEAD-like domain NJ56_RS02670 PF01043 SecA preprotein cross-linking domain NJ56_RS02675 PF06558 Secretion monitor precursor protein (SecM) NJ56_RS02685 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase NJ56_RS02690 PF00091 Tubulin/FtsZ family, GTPase domain NJ56_RS02690 PF12327 FtsZ family, C-terminal domain NJ56_RS02695 PF02491 SHS2 domain inserted in FTSA NJ56_RS02700 PF03799 Cell division protein FtsQ NJ56_RS02700 PF08478 POTRA domain, FtsQ-type NJ56_RS02705 PF01820 D-ala D-ala ligase N-terminus NJ56_RS02705 PF07478 D-ala D-ala ligase C-terminus NJ56_RS02710 PF01225 Mur ligase family, catalytic domain NJ56_RS02710 PF02875 Mur ligase family, glutamate ligase domain NJ56_RS02710 PF08245 Mur ligase middle domain NJ56_RS02715 PF03033 Glycosyltransferase family 28 N-terminal domain NJ56_RS02715 PF04101 Glycosyltransferase family 28 C-terminal domain NJ56_RS02720 PF01098 Cell cycle protein NJ56_RS02725 PF08245 Mur ligase middle domain NJ56_RS02725 PF02875 Mur ligase family, glutamate ligase domain NJ56_RS02730 PF00953 Glycosyl transferase family 4 NJ56_RS02730 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 NJ56_RS02735 PF02875 Mur ligase family, glutamate ligase domain NJ56_RS02735 PF01225 Mur ligase family, catalytic domain NJ56_RS02735 PF08245 Mur ligase middle domain NJ56_RS02740 PF01225 Mur ligase family, catalytic domain NJ56_RS02740 PF08245 Mur ligase middle domain NJ56_RS02740 PF02875 Mur ligase family, glutamate ligase domain NJ56_RS02745 PF00905 Penicillin binding protein transpeptidase domain NJ56_RS02745 PF03717 Penicillin-binding Protein dimerisation domain NJ56_RS02750 PF04999 Cell division protein FtsL NJ56_RS02755 PF01795 MraW methylase family NJ56_RS02760 PF02381 MraZ protein, putative antitoxin-like NJ56_RS02765 PF06610 L-alanine exporter NJ56_RS02770 PF12323 Helix-turn-helix domain NJ56_RS02770 PF07282 Putative transposase DNA-binding domain NJ56_RS02770 PF01385 Probable transposase NJ56_RS02775 PF01797 Transposase IS200 like NJ56_RS02780 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NJ56_RS02780 PF00356 Bacterial regulatory proteins, lacI family NJ56_RS02785 PF10369 Small subunit of acetolactate synthase NJ56_RS02790 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NJ56_RS02790 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NJ56_RS02790 PF00205 Thiamine pyrophosphate enzyme, central domain NJ56_RS02795 PF00501 AMP-binding enzyme NJ56_RS02800 PF03466 LysR substrate binding domain NJ56_RS02800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NJ56_RS02805 PF08502 LeuA allosteric (dimerisation) domain NJ56_RS02805 PF00682 HMGL-like NJ56_RS02810 PF00180 Isocitrate/isopropylmalate dehydrogenase NJ56_RS02815 PF00330 Aconitase family (aconitate hydratase) NJ56_RS02820 PF00694 Aconitase C-terminal domain NJ56_RS02825 PF07690 Major Facilitator Superfamily NJ56_RS02835 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NJ56_RS02835 PF12793 Sugar transport-related sRNA regulator N-term NJ56_RS02845 PF00528 Binding-protein-dependent transport system inner membrane component NJ56_RS02850 PF00005 ABC transporter NJ56_RS02855 PF09335 SNARE associated Golgi protein NJ56_RS02860 PF00136 DNA polymerase family B NJ56_RS02860 PF03104 DNA polymerase family B, exonuclease domain NJ56_RS02865 PF00271 Helicase conserved C-terminal domain NJ56_RS02865 PF12137 RNA polymerase recycling family C-terminal NJ56_RS02865 PF18337 RapA N-terminal Tudor like domain NJ56_RS02865 PF18339 RapA N-terminal Tudor like domain 1 NJ56_RS02865 PF00176 SNF2 family N-terminal domain NJ56_RS02870 PF00849 RNA pseudouridylate synthase NJ56_RS02875 PF00226 DnaJ domain NJ56_RS02875 PF05099 Tellurite resistance protein TerB NJ56_RS02880 PF03968 OstA-like protein NJ56_RS02880 PF04453 LPS transport system D NJ56_RS02885 PF09312 SurA N-terminal domain NJ56_RS02885 PF00639 PPIC-type PPIASE domain NJ56_RS02890 PF04166 Pyridoxal phosphate biosynthetic protein PdxA NJ56_RS02895 PF00398 Ribosomal RNA adenine dimethylase NJ56_RS02900 PF04379 ApaG domain NJ56_RS02905 PF00149 Calcineurin-like phosphoesterase NJ56_RS02915 PF00186 Dihydrofolate reductase NJ56_RS02920 PF12821 Threonine/Serine exporter, ThrE NJ56_RS02925 PF06738 Putative threonine/serine exporter NJ56_RS02930 PF01810 LysE type translocator NJ56_RS02935 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain NJ56_RS02935 PF02142 MGS-like domain NJ56_RS02935 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NJ56_RS02940 PF00117 Glutamine amidotransferase class-I NJ56_RS02940 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain NJ56_RS02945 PF01113 Dihydrodipicolinate reductase, N-terminus NJ56_RS02945 PF05173 Dihydrodipicolinate reductase, C-terminus NJ56_RS02950 PF02401 LytB protein NJ56_RS02955 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NJ56_RS02960 PF01252 Signal peptidase (SPase) II NJ56_RS02965 PF00133 tRNA synthetases class I (I, L, M and V) NJ56_RS02965 PF06827 Zinc finger found in FPG and IleRS NJ56_RS02965 PF08264 Anticodon-binding domain of tRNA NJ56_RS02970 PF06574 FAD synthetase NJ56_RS02970 PF01687 Riboflavin kinase NJ56_RS02980 PF01649 Ribosomal protein S20 NJ56_RS02985 PF03466 LysR substrate binding domain NJ56_RS02985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NJ56_RS02990 PF06965 Na+/H+ antiporter 1 NJ56_RS02995 PF01556 DnaJ C terminal domain NJ56_RS02995 PF00684 DnaJ central domain NJ56_RS02995 PF00226 DnaJ domain NJ56_RS03000 PF00012 Hsp70 protein NJ56_RS03005 PF01184 GPR1/FUN34/yaaH family NJ56_RS03015 PF07690 Major Facilitator Superfamily NJ56_RS03020 PF00994 Probable molybdopterin binding domain NJ56_RS03025 PF00923 Transaldolase/Fructose-6-phosphate aldolase NJ56_RS03030 PF03883 Peroxide stress protein YaaA NJ56_RS03035 PF00291 Pyridoxal-phosphate dependent enzyme NJ56_RS03035 PF14821 Threonine synthase N terminus NJ56_RS03040 PF08544 GHMP kinases C terminal NJ56_RS03040 PF00288 GHMP kinases N terminal domain NJ56_RS03045 PF03447 Homoserine dehydrogenase, NAD binding domain NJ56_RS03045 PF01842 ACT domain NJ56_RS03045 PF00696 Amino acid kinase family NJ56_RS03045 PF00742 Homoserine dehydrogenase NJ56_RS03045 PF13840 ACT domain NJ56_RS03050 PF08254 Threonine leader peptide NJ56_RS03055 PF00072 Response regulator receiver domain NJ56_RS03055 PF00486 Transcriptional regulatory protein, C terminal NJ56_RS03060 PF05981 CreA protein NJ56_RS03065 PF06445 GyrI-like small molecule binding domain NJ56_RS03065 PF12833 Helix-turn-helix domain NJ56_RS03070 PF00300 Histidine phosphatase superfamily (branch 1) NJ56_RS03075 PF01931 Protein of unknown function DUF84 NJ56_RS03080 PF01371 Trp repressor protein NJ56_RS03085 PF01464 Transglycosylase SLT domain NJ56_RS03085 PF14718 Soluble lytic murein transglycosylase L domain NJ56_RS03090 PF00690 Cation transporter/ATPase, N-terminus NJ56_RS03090 PF00689 Cation transporting ATPase, C-terminus NJ56_RS03105 PF00005 ABC transporter NJ56_RS03105 PF12848 ABC transporter NJ56_RS03110 PF01381 Helix-turn-helix NJ56_RS03110 PF13521 AAA domain NJ56_RS03115 PF18073 Rubredoxin metal binding domain NJ56_RS03120 PF18429 Domain of unknown function (DUF5609) NJ56_RS03125 PF10144 Bacterial virulence factor haemolysin NJ56_RS03130 PF01048 Phosphorylase superfamily NJ56_RS03135 PF01676 Metalloenzyme superfamily NJ56_RS03140 PF02885 Glycosyl transferase family, helical bundle domain NJ56_RS03140 PF00591 Glycosyl transferase family, a/b domain NJ56_RS03140 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain NJ56_RS03145 PF01791 DeoC/LacD family aldolase NJ56_RS03150 PF01773 Na+ dependent nucleoside transporter N-terminus NJ56_RS03150 PF07662 Na+ dependent nucleoside transporter C-terminus NJ56_RS03150 PF07670 Nucleoside recognition NJ56_RS03155 PF01026 TatD related DNase NJ56_RS03160 PF01734 Patatin-like phospholipase NJ56_RS03165 PF07043 Protein of unknown function (DUF1328) NJ56_RS03170 PF04972 BON domain NJ56_RS03175 PF00009 Elongation factor Tu GTP binding domain NJ56_RS03175 PF03144 Elongation factor Tu domain 2 NJ56_RS03175 PF16658 Class II release factor RF3, C-terminal domain NJ56_RS03180 PF00583 Acetyltransferase (GNAT) family NJ56_RS03185 PF03603 DNA polymerase III psi subunit NJ56_RS03190 PF05175 Methyltransferase small domain NJ56_RS03190 PF08468 Methyltransferase small domain N-terminal NJ56_RS03210 PF07256 Protein of unknown function (DUF1435) NJ56_RS03215 PF00990 Diguanylate cyclase, GGDEF domain NJ56_RS03220 PF00989 PAS fold NJ56_RS03220 PF00158 Sigma-54 interaction domain NJ56_RS03220 PF02954 Bacterial regulatory protein, Fis family NJ56_RS03225 PF03610 PTS system fructose IIA component NJ56_RS03225 PF05524 PEP-utilising enzyme, N-terminal NJ56_RS03225 PF00381 PTS HPr component phosphorylation site NJ56_RS03225 PF00391 PEP-utilising enzyme, mobile domain NJ56_RS03230 PF02734 DAK2 domain NJ56_RS03235 PF02733 Dak1 domain NJ56_RS03240 PF00465 Iron-containing alcohol dehydrogenase NJ56_RS03245 PF00873 AcrB/AcrD/AcrF family NJ56_RS03250 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NJ56_RS03265 PF01075 Glycosyltransferase family 9 (heptosyltransferase) NJ56_RS03270 PF10696 Protein of unknown function (DUF2501) NJ56_RS03280 PF01116 Fructose-bisphosphate aldolase class-II NJ56_RS03290 PF00884 Sulfatase NJ56_RS03295 PF04055 Radical SAM superfamily NJ56_RS03295 PF13186 Iron-sulfur cluster-binding domain NJ56_RS03300 PF07470 Glycosyl Hydrolase Family 88 NJ56_RS03310 PF04962 KduI/IolB family NJ56_RS03315 PF01979 Amidohydrolase family NJ56_RS03325 PF03613 PTS system mannose/fructose/sorbose family IID component NJ56_RS03330 PF03609 PTS system sorbose-specific iic component NJ56_RS03335 PF03830 PTS system sorbose subfamily IIB component NJ56_RS03340 PF01380 SIS domain NJ56_RS03345 PF08013 Tagatose 6 phosphate kinase NJ56_RS03350 PF00455 DeoR C terminal sensor domain NJ56_RS03350 PF08220 DeoR-like helix-turn-helix domain NJ56_RS03355 PF00884 Sulfatase NJ56_RS03360 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain NJ56_RS03360 PF02278 Polysaccharide lyase family 8, super-sandwich domain NJ56_RS03360 PF09093 Lyase, catalytic NJ56_RS03360 PF09092 Lyase, N terminal NJ56_RS03375 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain NJ56_RS03375 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain NJ56_RS03375 PF02278 Polysaccharide lyase family 8, super-sandwich domain NJ56_RS03380 PF06178 Oligogalacturonate-specific porin protein (KdgM) NJ56_RS03385 PF01344 Kelch motif NJ56_RS03390 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A NJ56_RS03395 PF03230 Antirestriction protein NJ56_RS03460 PF05016 ParE toxin of type II toxin-antitoxin system, parDE NJ56_RS03465 PF04221 RelB antitoxin NJ56_RS03495 PF00004 ATPase family associated with various cellular activities (AAA) NJ56_RS03550 PF03852 DNA mismatch endonuclease Vsr NJ56_RS03555 PF18284 DNA methylase N-terminal domain NJ56_RS03555 PF00145 C-5 cytosine-specific DNA methylase NJ56_RS03560 PF09019 EcoRII C terminal NJ56_RS03560 PF09217 Restriction endonuclease EcoRII, N-terminal NJ56_RS03585 PF13356 Arm DNA-binding domain NJ56_RS03585 PF00589 Phage integrase family NJ56_RS03595 PF03739 Lipopolysaccharide export system permease LptF/LptG NJ56_RS03600 PF03739 Lipopolysaccharide export system permease LptF/LptG NJ56_RS03605 PF02789 Cytosol aminopeptidase family, N-terminal domain NJ56_RS03605 PF00883 Cytosol aminopeptidase family, catalytic domain NJ56_RS03610 PF04364 DNA polymerase III chi subunit, HolC NJ56_RS03615 PF10458 Valyl tRNA synthetase tRNA binding arm NJ56_RS03615 PF00133 tRNA synthetases class I (I, L, M and V) NJ56_RS03615 PF08264 Anticodon-binding domain of tRNA NJ56_RS03620 PF00583 Acetyltransferase (GNAT) family NJ56_RS03625 PF06877 Regulator of ribonuclease activity B NJ56_RS03630 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NJ56_RS03630 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NJ56_RS03635 PF03477 ATP cone domain NJ56_RS03635 PF13597 Anaerobic ribonucleoside-triphosphate reductase NJ56_RS03645 PF06754 Phosphonate metabolism protein PhnG NJ56_RS03650 PF05845 Bacterial phosphonate metabolism protein (PhnH) NJ56_RS03655 PF05861 Bacterial phosphonate metabolism protein (PhnI) NJ56_RS03660 PF06007 Phosphonate metabolism protein PhnJ NJ56_RS03665 PF00005 ABC transporter NJ56_RS03670 PF00005 ABC transporter NJ56_RS03675 PF07969 Amidohydrolase family NJ56_RS03685 PF12706 Beta-lactamase superfamily domain NJ56_RS03690 PF13460 NAD(P)H-binding NJ56_RS03700 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain NJ56_RS03700 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain NJ56_RS03700 PF01276 Orn/Lys/Arg decarboxylase, major domain NJ56_RS03705 PF13520 Amino acid permease NJ56_RS03710 PF01541 GIY-YIG catalytic domain NJ56_RS03715 PF13508 Acetyltransferase (GNAT) domain NJ56_RS03720 PF02036 SCP-2 sterol transfer family NJ56_RS03725 PF01136 Peptidase family U32 NJ56_RS03730 PF01136 Peptidase family U32 NJ56_RS03735 PF03313 Serine dehydratase alpha chain NJ56_RS03745 PF00296 Luciferase-like monooxygenase NJ56_RS03750 PF00271 Helicase conserved C-terminal domain NJ56_RS03750 PF00270 DEAD/DEAH box helicase NJ56_RS03750 PF03880 DbpA RNA binding domain NJ56_RS03750 PF12343 Cold shock protein DEAD box A NJ56_RS03760 PF13181 Tetratricopeptide repeat NJ56_RS03760 PF07719 Tetratricopeptide repeat NJ56_RS03765 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain NJ56_RS03765 PF01138 3' exoribonuclease family, domain 1 NJ56_RS03765 PF00575 S1 RNA binding domain NJ56_RS03765 PF00013 KH domain NJ56_RS03765 PF03725 3' exoribonuclease family, domain 2 NJ56_RS03770 PF00312 Ribosomal protein S15 NJ56_RS03775 PF01509 TruB family pseudouridylate synthase (N terminal domain) NJ56_RS03775 PF16198 tRNA pseudouridylate synthase B C-terminal domain NJ56_RS03775 PF09157 Pseudouridine synthase II TruB, C-terminal NJ56_RS03780 PF02033 Ribosome-binding factor A NJ56_RS03785 PF00009 Elongation factor Tu GTP binding domain NJ56_RS03785 PF03144 Elongation factor Tu domain 2 NJ56_RS03785 PF11987 Translation-initiation factor 2 NJ56_RS03785 PF08364 Bacterial translation initiation factor IF-2 associated region NJ56_RS03785 PF04760 Translation initiation factor IF-2, N-terminal region NJ56_RS03790 PF13184 NusA-like KH domain NJ56_RS03790 PF08529 NusA N-terminal domain NJ56_RS03790 PF00575 S1 RNA binding domain NJ56_RS03795 PF02576 RimP N-terminal domain NJ56_RS03795 PF17384 RimP C-terminal SH3 domain NJ56_RS03810 PF03840 Preprotein translocase SecG subunit NJ56_RS03815 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NJ56_RS03815 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NJ56_RS03815 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NJ56_RS03815 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NJ56_RS03820 PF00809 Pterin binding enzyme NJ56_RS03825 PF17862 AAA+ lid domain NJ56_RS03825 PF06480 FtsH Extracellular NJ56_RS03825 PF01434 Peptidase family M41 NJ56_RS03825 PF00004 ATPase family associated with various cellular activities (AAA) NJ56_RS03830 PF01728 FtsJ-like methyltransferase NJ56_RS03835 PF01985 CRS1 / YhbY (CRM) domain NJ56_RS03840 PF03449 Transcription elongation factor, N-terminal NJ56_RS03840 PF01272 Transcription elongation factor, GreA/GreB, C-term NJ56_RS03845 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family NJ56_RS03850 PF00486 Transcriptional regulatory protein, C terminal NJ56_RS03850 PF00072 Response regulator receiver domain NJ56_RS03855 PF00512 His Kinase A (phospho-acceptor) domain NJ56_RS03855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NJ56_RS03855 PF00672 HAMP domain NJ56_RS03860 PF01018 GTP1/OBG NJ56_RS03860 PF01926 50S ribosome-binding GTPase NJ56_RS03865 PF00892 EamA-like transporter family NJ56_RS03870 PF01016 Ribosomal L27 protein NJ56_RS03875 PF00829 Ribosomal prokaryotic L21 protein NJ56_RS03880 PF00348 Polyprenyl synthetase NJ56_RS03895 PF13693 Winged helix-turn-helix DNA-binding NJ56_RS03900 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain NJ56_RS03900 PF00056 lactate/malate dehydrogenase, NAD binding domain NJ56_RS03905 PF01316 Arginine repressor, DNA binding domain NJ56_RS03905 PF02863 Arginine repressor, C-terminal domain NJ56_RS03910 PF02875 Mur ligase family, glutamate ligase domain NJ56_RS03910 PF08245 Mur ligase middle domain NJ56_RS03910 PF01225 Mur ligase family, catalytic domain NJ56_RS03915 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain NJ56_RS03920 PF00719 Inorganic pyrophosphatase NJ56_RS03925 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like NJ56_RS03930 PF04357 TamB, inner membrane protein subunit of TAM complex NJ56_RS03935 PF01103 Surface antigen NJ56_RS03935 PF07244 Surface antigen variable number repeat NJ56_RS03935 PF17243 POTRA domain TamA domain 1 NJ56_RS03940 PF01625 Peptide methionine sulfoxide reductase NJ56_RS03945 PF00571 CBS domain NJ56_RS03945 PF03471 Transporter associated domain NJ56_RS03945 PF01595 Cyclin M transmembrane N-terminal domain NJ56_RS03950 PF06526 Protein of unknown function (DUF1107) NJ56_RS03955 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) NJ56_RS03960 PF00459 Inositol monophosphatase family NJ56_RS03965 PF00149 Calcineurin-like phosphoesterase NJ56_RS03965 PF02872 5'-nucleotidase, C-terminal domain NJ56_RS03970 PF04405 Domain of Unknown function (DUF542) NJ56_RS03970 PF01814 Hemerythrin HHE cation binding domain NJ56_RS03975 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NJ56_RS03975 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NJ56_RS03980 PF04225 Opacity-associated protein A LysM-like domain NJ56_RS03980 PF08525 Opacity-associated protein A N-terminal motif NJ56_RS03985 PF03948 Ribosomal protein L9, C-terminal domain NJ56_RS03985 PF01281 Ribosomal protein L9, N-terminal domain NJ56_RS03990 PF01084 Ribosomal protein S18 NJ56_RS03995 PF00436 Single-strand binding protein family NJ56_RS04000 PF01250 Ribosomal protein S6 NJ56_RS04015 PF00326 Prolyl oligopeptidase family NJ56_RS04035 PF00577 Outer membrane usher protein NJ56_RS04035 PF13954 PapC N-terminal domain NJ56_RS04035 PF13953 PapC C-terminal domain NJ56_RS04040 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain NJ56_RS04060 PF00588 SpoU rRNA Methylase family NJ56_RS04060 PF08032 RNA 2'-O ribose methyltransferase substrate binding NJ56_RS04065 PF00575 S1 RNA binding domain NJ56_RS04065 PF17876 Cold shock domain NJ56_RS04065 PF00773 RNB domain NJ56_RS04065 PF08206 Ribonuclease B OB domain NJ56_RS04065 PF08461 Ribonuclease R winged-helix domain NJ56_RS04070 PF02082 Transcriptional regulator NJ56_RS04075 PF00709 Adenylosuccinate synthetase NJ56_RS04080 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) NJ56_RS04085 PF01145 SPFH domain / Band 7 family NJ56_RS04090 PF01145 SPFH domain / Band 7 family NJ56_RS04090 PF12221 Bacterial membrane protein N terminal NJ56_RS04095 PF01926 50S ribosome-binding GTPase NJ56_RS04095 PF16360 GTP-binding GTPase Middle Region NJ56_RS04095 PF13167 GTP-binding GTPase N-terminal NJ56_RS04100 PF17209 Hfq protein NJ56_RS04110 PF08676 MutL C terminal dimerisation domain NJ56_RS04110 PF01119 DNA mismatch repair protein, C-terminal domain NJ56_RS04115 PF01520 N-acetylmuramoyl-L-alanine amidase NJ56_RS04120 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE NJ56_RS04125 PF01256 Carbohydrate kinase NJ56_RS04125 PF03853 YjeF-related protein N-terminus NJ56_RS04130 PF08331 Domain of unknown function (DUF1730) NJ56_RS04150 PF00929 Exonuclease NJ56_RS04155 PF03193 RsgA GTPase NJ56_RS04160 PF02666 Phosphatidylserine decarboxylase NJ56_RS04165 PF12794 Mechanosensitive ion channel inner membrane domain 1 NJ56_RS04165 PF12795 Mechanosensitive ion channel porin domain NJ56_RS04165 PF00924 Mechanosensitive ion channel NJ56_RS04170 PF00152 tRNA synthetases class II (D, K and N) NJ56_RS04175 PF00890 FAD binding domain NJ56_RS04175 PF02910 Fumarate reductase flavoprotein C-term NJ56_RS04180 PF13183 4Fe-4S dicluster domain NJ56_RS04180 PF13085 2Fe-2S iron-sulfur cluster binding domain NJ56_RS04185 PF02300 Fumarate reductase subunit C NJ56_RS04190 PF02313 Fumarate reductase subunit D NJ56_RS04195 PF08212 Lipocalin-like domain NJ56_RS04200 PF00893 Small Multidrug Resistance protein NJ56_RS04205 PF00419 Fimbrial protein NJ56_RS04210 PF13954 PapC N-terminal domain NJ56_RS04210 PF00577 Outer membrane usher protein NJ56_RS04210 PF13953 PapC C-terminal domain NJ56_RS04215 PF02753 Pili assembly chaperone PapD, C-terminal domain NJ56_RS04215 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain NJ56_RS04225 PF00196 Bacterial regulatory proteins, luxR family NJ56_RS04230 PF18416 N-acetylglucosamine binding protein domain 2 NJ56_RS04230 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading NJ56_RS04235 PF08207 Elongation factor P (EF-P) KOW-like domain NJ56_RS04235 PF01132 Elongation factor P (EF-P) OB domain NJ56_RS04235 PF09285 Elongation factor P, C-terminal NJ56_RS04240 PF04055 Radical SAM superfamily NJ56_RS04245 PF13698 Domain of unknown function (DUF4156) NJ56_RS04250 PF00118 TCP-1/cpn60 chaperonin family NJ56_RS04255 PF00166 Chaperonin 10 Kd subunit NJ56_RS04260 PF04186 FxsA cytoplasmic membrane protein NJ56_RS04265 PF10415 Fumarase C C-terminus NJ56_RS04265 PF00206 Lyase NJ56_RS04270 PF03605 Anaerobic c4-dicarboxylate membrane transporter NJ56_RS04275 PF03091 CutA1 divalent ion tolerance protein NJ56_RS04280 PF11412 Disulphide bond corrector protein DsbC NJ56_RS04280 PF02683 Cytochrome C biogenesis protein transmembrane region NJ56_RS04295 PF00589 Phage integrase family NJ56_RS04305 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding NJ56_RS04325 PF00581 Rhodanese-like domain NJ56_RS04325 PF00899 ThiF family NJ56_RS04345 PF00717 Peptidase S24-like NJ56_RS04360 PF02796 Helix-turn-helix domain of resolvase NJ56_RS04360 PF00239 Resolvase, N terminal domain NJ56_RS04375 PF06755 CbtA_toxin of type IV toxin-antitoxin system NJ56_RS04400 PF03230 Antirestriction protein NJ56_RS04465 PF00004 ATPase family associated with various cellular activities (AAA) NJ56_RS04580 PF01131 DNA topoisomerase NJ56_RS04580 PF01751 Toprim domain NJ56_RS04615 PF00772 DnaB-like helicase N terminal domain NJ56_RS04615 PF03796 DnaB-like helicase C terminal domain NJ56_RS04630 PF00375 Sodium:dicarboxylate symporter family NJ56_RS04635 PF16177 Acetyl-coenzyme A synthetase N-terminus NJ56_RS04635 PF00501 AMP-binding enzyme NJ56_RS04635 PF13193 AMP-binding enzyme C-terminal domain NJ56_RS04640 PF04341 Protein of unknown function, DUF485 NJ56_RS04645 PF00474 Sodium:solute symporter family NJ56_RS04675 PF01808 AICARFT/IMPCHase bienzyme NJ56_RS04675 PF02142 MGS-like domain NJ56_RS04680 PF02843 Phosphoribosylglycinamide synthetase, C domain NJ56_RS04680 PF02844 Phosphoribosylglycinamide synthetase, N domain NJ56_RS04680 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain NJ56_RS04685 PF07356 Protein of unknown function (DUF1481) NJ56_RS04690 PF00216 Bacterial DNA-binding protein NJ56_RS04695 PF04222 Protein of unknown function (DUF416) NJ56_RS04700 PF04493 Endonuclease V NJ56_RS04705 PF01208 Uroporphyrinogen decarboxylase (URO-D) NJ56_RS04710 PF09297 NADH pyrophosphatase zinc ribbon domain NJ56_RS04710 PF00293 NUDIX domain NJ56_RS04715 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ NJ56_RS04720 PF13667 ThiC-associated domain NJ56_RS04720 PF01964 Radical SAM ThiC family NJ56_RS04725 PF02581 Thiamine monophosphate synthase NJ56_RS04730 PF00899 ThiF family NJ56_RS04735 PF02597 ThiS family NJ56_RS04740 PF05690 Thiazole biosynthesis protein ThiG NJ56_RS04745 PF04055 Radical SAM superfamily NJ56_RS04745 PF06968 Biotin and Thiamin Synthesis associated domain NJ56_RS04750 PF04983 RNA polymerase Rpb1, domain 3 NJ56_RS04750 PF05000 RNA polymerase Rpb1, domain 4 NJ56_RS04750 PF04997 RNA polymerase Rpb1, domain 1 NJ56_RS04750 PF00623 RNA polymerase Rpb1, domain 2 NJ56_RS04750 PF04998 RNA polymerase Rpb1, domain 5 NJ56_RS04755 PF10385 RNA polymerase beta subunit external 1 domain NJ56_RS04755 PF04563 RNA polymerase beta subunit NJ56_RS04755 PF04560 RNA polymerase Rpb2, domain 7 NJ56_RS04755 PF00562 RNA polymerase Rpb2, domain 6 NJ56_RS04755 PF04565 RNA polymerase Rpb2, domain 3 NJ56_RS04755 PF04561 RNA polymerase Rpb2, domain 2 NJ56_RS04760 PF00542 Ribosomal protein L7/L12 C-terminal domain NJ56_RS04760 PF16320 Ribosomal protein L7/L12 dimerisation domain NJ56_RS04765 PF00466 Ribosomal protein L10 NJ56_RS04775 PF00687 Ribosomal protein L1p/L10e family NJ56_RS04780 PF03946 Ribosomal protein L11, N-terminal domain NJ56_RS04780 PF00298 Ribosomal protein L11, RNA binding domain NJ56_RS04785 PF02357 Transcription termination factor nusG NJ56_RS04785 PF00467 KOW motif NJ56_RS04790 PF00584 SecE/Sec61-gamma subunits of protein translocation complex NJ56_RS04795 PF00009 Elongation factor Tu GTP binding domain NJ56_RS04795 PF03144 Elongation factor Tu domain 2 NJ56_RS04795 PF03143 Elongation factor Tu C-terminal domain NJ56_RS04820 PF00485 Phosphoribulokinase / Uridine kinase family NJ56_RS04825 PF02237 Biotin protein ligase C terminal domain NJ56_RS04825 PF08279 HTH domain NJ56_RS04825 PF03099 Biotin/lipoate A/B protein ligase family NJ56_RS04830 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain NJ56_RS04830 PF01565 FAD binding domain NJ56_RS04855 PF12724 Flavodoxin domain NJ56_RS04860 PF02386 Cation transport protein NJ56_RS04865 PF01205 Uncharacterized protein family UPF0029 NJ56_RS04865 PF09186 Domain of unknown function (DUF1949) NJ56_RS04870 PF00557 Metallopeptidase family M24 NJ56_RS04875 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NJ56_RS04875 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NJ56_RS04875 PF00378 Enoyl-CoA hydratase/isomerase NJ56_RS04880 PF00108 Thiolase, N-terminal domain NJ56_RS04880 PF02803 Thiolase, C-terminal domain NJ56_RS04885 PF00970 Oxidoreductase FAD-binding domain NJ56_RS04885 PF00175 Oxidoreductase NAD-binding domain NJ56_RS04890 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase NJ56_RS04900 PF02357 Transcription termination factor nusG NJ56_RS04905 PF00490 Delta-aminolevulinic acid dehydratase NJ56_RS04910 PF01026 TatD related DNase NJ56_RS04915 PF00902 Sec-independent protein translocase protein (TatC) NJ56_RS04925 PF02416 mttA/Hcf106 family NJ56_RS04930 PF03109 ABC1 family NJ56_RS04935 PF02036 SCP-2 sterol transfer family NJ56_RS04940 PF01209 ubiE/COQ5 methyltransferase family NJ56_RS04945 PF02646 RmuC family NJ56_RS04950 PF09335 SNARE associated Golgi protein NJ56_RS04955 PF13722 5TM C-terminal transporter carbon starvation CstA NJ56_RS04955 PF02554 Carbon starvation protein CstA NJ56_RS04965 PF01048 Phosphorylase superfamily NJ56_RS04970 PF01738 Dienelactone hydrolase family NJ56_RS04975 PF01717 Cobalamin-independent synthase, Catalytic domain NJ56_RS04975 PF08267 Cobalamin-independent synthase, N-terminal domain NJ56_RS04980 PF03466 LysR substrate binding domain NJ56_RS04980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NJ56_RS04985 PF00892 EamA-like transporter family NJ56_RS04995 PF03009 Glycerophosphoryl diester phosphodiesterase family NJ56_RS05000 PF00005 ABC transporter NJ56_RS05000 PF17912 MalK OB fold domain NJ56_RS05005 PF00528 Binding-protein-dependent transport system inner membrane component NJ56_RS05010 PF00528 Binding-protein-dependent transport system inner membrane component NJ56_RS05015 PF13416 Bacterial extracellular solute-binding protein NJ56_RS05050 PF00005 ABC transporter NJ56_RS05055 PF00005 ABC transporter NJ56_RS05055 PF12399 Branched-chain amino acid ATP-binding cassette transporter NJ56_RS05060 PF11862 Domain of unknown function (DUF3382) NJ56_RS05060 PF02653 Branched-chain amino acid transport system / permease component NJ56_RS05065 PF02653 Branched-chain amino acid transport system / permease component NJ56_RS05070 PF13458 Periplasmic binding protein NJ56_RS05075 PF12568 Acetyltransferase (GNAT) domain, PanZ NJ56_RS05080 PF02595 Glycerate kinase family NJ56_RS05085 PF02447 GntP family permease NJ56_RS05090 PF05651 Putative sugar diacid recognition NJ56_RS05090 PF13556 PucR C-terminal helix-turn-helix domain NJ56_RS05090 PF17853 GGDEF-like domain NJ56_RS05095 PF00140 Sigma-70 factor, region 1.2 NJ56_RS05095 PF04542 Sigma-70 region 2 NJ56_RS05095 PF04545 Sigma-70, region 4 NJ56_RS05100 PF02687 FtsX-like permease family NJ56_RS05100 PF18075 FtsX extracellular domain NJ56_RS05105 PF00005 ABC transporter NJ56_RS05110 PF00448 SRP54-type protein, GTPase domain NJ56_RS05110 PF02881 SRP54-type protein, helical bundle domain NJ56_RS05110 PF00448 SRP54-type protein, GTPase domain NJ56_RS05110 PF02881 SRP54-type protein, helical bundle domain NJ56_RS05120 PF06611 Protein of unknown function (DUF1145) NJ56_RS05135 PF07947 YhhN family NJ56_RS05140 PF00403 Heavy-metal-associated domain NJ56_RS05145 PF01206 Sulfurtransferase TusA NJ56_RS05150 PF02592 Putative vitamin uptake transporter NJ56_RS05155 PF08786 DcrB NJ56_RS05160 PF13183 4Fe-4S dicluster domain NJ56_RS05160 PF02754 Cysteine-rich domain NJ56_RS05165 PF00890 FAD binding domain NJ56_RS05170 PF01266 FAD dependent oxidoreductase NJ56_RS05170 PF04324 BFD-like [2Fe-2S] binding domain NJ56_RS05180 PF07690 Major Facilitator Superfamily NJ56_RS05185 PF03009 Glycerophosphoryl diester phosphodiesterase family NJ56_RS05195 PF12146 Serine aminopeptidase, S33 NJ56_RS05200 PF01810 LysE type translocator NJ56_RS05205 PF00570 HRDC domain NJ56_RS05205 PF16124 RecQ zinc-binding NJ56_RS05205 PF09382 RQC domain NJ56_RS05205 PF00270 DEAD/DEAH box helicase NJ56_RS05205 PF00271 Helicase conserved C-terminal domain NJ56_RS05210 PF02253 Phospholipase A1 NJ56_RS05215 PF03061 Thioesterase superfamily NJ56_RS05220 PF00892 EamA-like transporter family NJ56_RS05225 PF01544 CorA-like Mg2+ transporter protein NJ56_RS05235 PF09370 Phosphoenolpyruvate hydrolase-like NJ56_RS05250 PF00580 UvrD/REP helicase N-terminal domain NJ56_RS05250 PF13361 UvrD-like helicase C-terminal domain NJ56_RS05255 PF13419 Haloacid dehalogenase-like hydrolase NJ56_RS05260 PF02899 Phage integrase, N-terminal SAM-like domain NJ56_RS05260 PF00589 Phage integrase family NJ56_RS05265 PF04340 Protein of unknown function, DUF484 NJ56_RS05270 PF01678 Diaminopimelate epimerase NJ56_RS05275 PF13627 Prokaryotic lipoprotein-attachment site NJ56_RS05280 PF01491 Frataxin-like domain NJ56_RS05285 PF12633 Adenylate cyclase NT domain NJ56_RS05285 PF01295 Adenylate cyclase, class-I NJ56_RS05290 PF03900 Porphobilinogen deaminase, C-terminal domain NJ56_RS05290 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain NJ56_RS05295 PF02602 Uroporphyrinogen-III synthase HemD NJ56_RS05300 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase NJ56_RS05305 PF07219 HemY protein N-terminus NJ56_RS05305 PF07719 Tetratricopeptide repeat NJ56_RS05335 PF00324 Amino acid permease NJ56_RS05340 PF03808 Glycosyl transferase WecB/TagA/CpsF family NJ56_RS05345 PF06899 WzyE protein, O-antigen assembly polymerase NJ56_RS05350 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 NJ56_RS05355 PF01943 Polysaccharide biosynthesis protein NJ56_RS05360 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NJ56_RS05370 PF00483 Nucleotidyl transferase NJ56_RS05375 PF16363 GDP-mannose 4,6 dehydratase NJ56_RS05380 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NJ56_RS05380 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NJ56_RS05380 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NJ56_RS05385 PF02350 UDP-N-acetylglucosamine 2-epimerase NJ56_RS05390 PF02706 Chain length determinant protein NJ56_RS05395 PF00953 Glycosyl transferase family 4 NJ56_RS05400 PF07497 Rho termination factor, RNA-binding domain NJ56_RS05400 PF07498 Rho termination factor, N-terminal domain NJ56_RS05400 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NJ56_RS05405 PF00085 Thioredoxin NJ56_RS05410 PF00271 Helicase conserved C-terminal domain NJ56_RS05410 PF00270 DEAD/DEAH box helicase NJ56_RS05415 PF02541 Ppx/GppA phosphatase family NJ56_RS05420 PF13361 UvrD-like helicase C-terminal domain NJ56_RS05420 PF00580 UvrD/REP helicase N-terminal domain NJ56_RS05430 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain NJ56_RS05430 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain NJ56_RS05435 PF03466 LysR substrate binding domain NJ56_RS05435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NJ56_RS05440 PF18416 N-acetylglucosamine binding protein domain 2 NJ56_RS05440 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading NJ56_RS05445 PF00585 C-terminal regulatory domain of Threonine dehydratase NJ56_RS05445 PF00291 Pyridoxal-phosphate dependent enzyme NJ56_RS05450 PF00920 Dehydratase family NJ56_RS05460 PF01063 Amino-transferase class IV NJ56_RS05470 PF00205 Thiamine pyrophosphate enzyme, central domain NJ56_RS05470 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NJ56_RS05470 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NJ56_RS05475 PF08046 IlvGEDA operon leader peptide NJ56_RS05480 PF13335 Magnesium chelatase, subunit ChlI C-terminal NJ56_RS05480 PF01078 Magnesium chelatase, subunit ChlI NJ56_RS05485 PF04219 Protein of unknown function, DUF NJ56_RS05490 PF03466 LysR substrate binding domain NJ56_RS05490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NJ56_RS05535 PF01177 Asp/Glu/Hydantoin racemase NJ56_RS05545 PF05958 tRNA (Uracil-5-)-methyltransferase NJ56_RS05550 PF07226 Protein of unknown function (DUF1422) NJ56_RS05555 PF00440 Bacterial regulatory proteins, tetR family NJ56_RS05560 PF07992 Pyridine nucleotide-disulphide oxidoreductase NJ56_RS05560 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NJ56_RS05565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NJ56_RS05565 PF03466 LysR substrate binding domain NJ56_RS05570 PF00462 Glutaredoxin NJ56_RS05570 PF08534 Redoxin NJ56_RS05575 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NJ56_RS05575 PF07992 Pyridine nucleotide-disulphide oxidoreductase NJ56_RS05595 PF00529 HlyD membrane-fusion protein of T1SS NJ56_RS05600 PF00664 ABC transporter transmembrane region NJ56_RS05600 PF00005 ABC transporter NJ56_RS05610 PF00593 TonB dependent receptor NJ56_RS05610 PF07715 TonB-dependent Receptor Plug Domain NJ56_RS05615 PF00206 Lyase NJ56_RS05615 PF14698 Argininosuccinate lyase C-terminal NJ56_RS05620 PF00764 Arginosuccinate synthase NJ56_RS05625 PF00696 Amino acid kinase family NJ56_RS05630 PF01118 Semialdehyde dehydrogenase, NAD binding domain NJ56_RS05630 PF02774 Semialdehyde dehydrogenase, dimerisation domain NJ56_RS05635 PF07687 Peptidase dimerisation domain NJ56_RS05635 PF01546 Peptidase family M20/M25/M40 NJ56_RS05640 PF00311 Phosphoenolpyruvate carboxylase NJ56_RS05650 PF02219 Methylenetetrahydrofolate reductase NJ56_RS05670 PF03447 Homoserine dehydrogenase, NAD binding domain NJ56_RS05670 PF00696 Amino acid kinase family NJ56_RS05670 PF00742 Homoserine dehydrogenase NJ56_RS05675 PF01053 Cys/Met metabolism PLP-dependent enzyme NJ56_RS05680 PF01340 Met Apo-repressor, MetJ NJ56_RS05685 PF01197 Ribosomal protein L31 NJ56_RS05690 PF00270 DEAD/DEAH box helicase NJ56_RS05690 PF00271 Helicase conserved C-terminal domain NJ56_RS05690 PF17764 3′ DNA-binding domain (3′BD) NJ56_RS05690 PF18074 Primosomal protein N C-terminal domain NJ56_RS05690 PF18319 PriA DNA helicase Cys-rich region (CRR) domain NJ56_RS05695 PF00356 Bacterial regulatory proteins, lacI family NJ56_RS05700 PF05036 Sporulation related domain NJ56_RS05705 PF00227 Proteasome subunit NJ56_RS05710 PF00004 ATPase family associated with various cellular activities (AAA) NJ56_RS05710 PF10431 C-terminal, D2-small domain, of ClpB protein NJ56_RS05710 PF07724 AAA domain (Cdc48 subfamily) NJ56_RS05715 PF01040 UbiA prenyltransferase family NJ56_RS05720 PF03737 Aldolase/RraA NJ56_RS05725 PF06005 Cell division protein ZapB NJ56_RS05735 PF00230 Major intrinsic protein NJ56_RS05740 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NJ56_RS05740 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NJ56_RS05745 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded NJ56_RS05750 PF07690 Major Facilitator Superfamily NJ56_RS05755 PF00175 Oxidoreductase NAD-binding domain NJ56_RS05755 PF00970 Oxidoreductase FAD-binding domain NJ56_RS05760 PF05656 Protein of unknown function (DUF805) NJ56_RS05765 PF07305 Protein of unknown function (DUF1454) NJ56_RS05770 PF00121 Triosephosphate isomerase NJ56_RS05780 PF00365 Phosphofructokinase NJ56_RS05785 PF01545 Cation efflux family NJ56_RS05785 PF16916 Dimerisation domain of Zinc Transporter NJ56_RS05790 PF07813 LTXXQ motif family protein NJ56_RS05795 PF00486 Transcriptional regulatory protein, C terminal NJ56_RS05795 PF00072 Response regulator receiver domain NJ56_RS05800 PF00672 HAMP domain NJ56_RS05800 PF16527 Two-component sensor protein CpxA, periplasmic domain NJ56_RS05800 PF00512 His Kinase A (phospho-acceptor) domain NJ56_RS05800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NJ56_RS05805 PF00588 SpoU rRNA Methylase family NJ56_RS05810 PF00132 Bacterial transferase hexapeptide (six repeats) NJ56_RS05810 PF06426 Serine acetyltransferase, N-terminal NJ56_RS05815 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NJ56_RS05815 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus NJ56_RS05820 PF02556 Preprotein translocase subunit SecB NJ56_RS05825 PF00462 Glutaredoxin NJ56_RS05830 PF00581 Rhodanese-like domain NJ56_RS05835 PF06415 BPG-independent PGAM N-terminus (iPGM_N) NJ56_RS05835 PF01676 Metalloenzyme superfamily NJ56_RS05840 PF01551 Peptidase family M23 NJ56_RS05845 PF04748 Divergent polysaccharide deacetylase NJ56_RS05850 PF00107 Zinc-binding dehydrogenase NJ56_RS05850 PF08240 Alcohol dehydrogenase GroES-like domain NJ56_RS05855 PF00155 Aminotransferase class I and II NJ56_RS05860 PF01370 NAD dependent epimerase/dehydratase family NJ56_RS05865 PF01075 Glycosyltransferase family 9 (heptosyltransferase) NJ56_RS05870 PF01075 Glycosyltransferase family 9 (heptosyltransferase) NJ56_RS05875 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) NJ56_RS05880 PF00535 Glycosyl transferase family 2 NJ56_RS05885 PF01467 Cytidylyltransferase-like NJ56_RS05890 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NJ56_RS05890 PF06827 Zinc finger found in FPG and IleRS NJ56_RS05890 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NJ56_RS05895 PF00471 Ribosomal protein L33 NJ56_RS05900 PF00830 Ribosomal L28 family NJ56_RS05910 PF04002 RadC-like JAB domain NJ56_RS05915 PF02441 Flavoprotein NJ56_RS05915 PF04127 DNA / pantothenate metabolism flavoprotein NJ56_RS05920 PF00692 dUTPase NJ56_RS05925 PF00440 Bacterial regulatory proteins, tetR family NJ56_RS05930 PF00156 Phosphoribosyl transferase domain NJ56_RS05935 PF03725 3' exoribonuclease family, domain 2 NJ56_RS05935 PF01138 3' exoribonuclease family, domain 1 NJ56_RS05940 PF08340 Domain of unknown function (DUF1732) NJ56_RS05940 PF03755 YicC-like family, N-terminal region NJ56_RS05950 PF03466 LysR substrate binding domain NJ56_RS05950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NJ56_RS05955 PF00563 EAL domain NJ56_RS05955 PF00990 Diguanylate cyclase, GGDEF domain NJ56_RS05955 PF13426 PAS domain NJ56_RS05960 PF00378 Enoyl-CoA hydratase/isomerase NJ56_RS05965 PF01773 Na+ dependent nucleoside transporter N-terminus NJ56_RS05965 PF07662 Na+ dependent nucleoside transporter C-terminus NJ56_RS05965 PF07670 Nucleoside recognition NJ56_RS05980 PF03458 UPF0126 domain NJ56_RS05985 PF01653 NAD-dependent DNA ligase adenylation domain NJ56_RS05985 PF03120 NAD-dependent DNA ligase OB-fold domain NJ56_RS05990 PF00625 Guanylate kinase NJ56_RS05995 PF01192 RNA polymerase Rpb6 NJ56_RS06000 PF02824 TGS domain NJ56_RS06000 PF04607 Region found in RelA / SpoT proteins NJ56_RS06000 PF13291 ACT domain NJ56_RS06005 PF00588 SpoU rRNA Methylase family NJ56_RS06005 PF12105 SpoU, rRNA methylase, C-terminal NJ56_RS06010 PF17191 RecG wedge domain NJ56_RS06010 PF00271 Helicase conserved C-terminal domain NJ56_RS06010 PF00270 DEAD/DEAH box helicase NJ56_RS06015 PF03616 Sodium/glutamate symporter NJ56_RS06020 PF00860 Permease family NJ56_RS06025 PF05170 AsmA family NJ56_RS06030 PF09500 Putative thioesterase (yiiD_Cterm) NJ56_RS06030 PF00583 Acetyltransferase (GNAT) family NJ56_RS06035 PF02580 D-Tyr-tRNA(Tyr) deacylase NJ56_RS06040 PF03631 Virulence factor BrkB NJ56_RS06045 PF13419 Haloacid dehalogenase-like hydrolase NJ56_RS06050 PF00679 Elongation factor G C-terminus NJ56_RS06050 PF00009 Elongation factor Tu GTP binding domain NJ56_RS06050 PF03144 Elongation factor Tu domain 2 NJ56_RS06055 PF00120 Glutamine synthetase, catalytic domain NJ56_RS06055 PF03951 Glutamine synthetase, beta-Grasp domain NJ56_RS06065 PF00989 PAS fold NJ56_RS06065 PF00512 His Kinase A (phospho-acceptor) domain NJ56_RS06065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NJ56_RS06070 PF00072 Response regulator receiver domain NJ56_RS06070 PF02954 Bacterial regulatory protein, Fis family NJ56_RS06070 PF00158 Sigma-54 interaction domain NJ56_RS06075 PF04055 Radical SAM superfamily NJ56_RS06075 PF06969 HemN C-terminal domain NJ56_RS06085 PF04220 Der GTPase activator (YihI) NJ56_RS06090 PF01926 50S ribosome-binding GTPase NJ56_RS06095 PF01367 5'-3' exonuclease, C-terminal SAM fold NJ56_RS06095 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NJ56_RS06095 PF01612 3'-5' exonuclease NJ56_RS06095 PF00476 DNA polymerase family A NJ56_RS06100 PF01323 DSBA-like thioredoxin domain NJ56_RS06105 PF01636 Phosphotransferase enzyme family NJ56_RS06110 PF06288 Protein of unknown function (DUF1040) NJ56_RS06115 PF12804 MobA-like NTP transferase domain NJ56_RS06120 PF03205 Molybdopterin guanine dinucleotide synthesis protein B NJ56_RS06145 PF07729 FCD domain NJ56_RS06145 PF00392 Bacterial regulatory proteins, gntR family NJ56_RS06150 PF00356 Bacterial regulatory proteins, lacI family NJ56_RS06155 PF00294 pfkB family carbohydrate kinase NJ56_RS06160 PF13407 Periplasmic binding protein domain NJ56_RS06165 PF02653 Branched-chain amino acid transport system / permease component NJ56_RS06170 PF00005 ABC transporter NJ56_RS06175 PF05025 RbsD / FucU transport protein family NJ56_RS06180 PF02705 K+ potassium transporter NJ56_RS06185 PF07728 AAA domain (dynein-related subfamily) NJ56_RS06185 PF17868 AAA lid domain NJ56_RS06185 PF12592 Protein of unknown function (DUF3763) NJ56_RS06190 PF05762 VWA domain containing CoxE-like protein NJ56_RS06200 PF03590 Aspartate-ammonia ligase NJ56_RS06205 PF01037 Lrp/AsnC ligand binding domain NJ56_RS06210 PF00258 Flavodoxin NJ56_RS06220 PF13932 GidA associated domain NJ56_RS06220 PF01134 Glucose inhibited division protein A NJ56_RS06225 PF02527 rRNA small subunit methyltransferase G NJ56_RS06230 PF03899 ATP synthase I chain NJ56_RS06235 PF00119 ATP synthase A chain NJ56_RS06240 PF00137 ATP synthase subunit C NJ56_RS06245 PF00430 ATP synthase B/B' CF(0) NJ56_RS06250 PF00213 ATP synthase delta (OSCP) subunit NJ56_RS06255 PF00306 ATP synthase alpha/beta chain, C terminal domain NJ56_RS06255 PF02874 ATP synthase alpha/beta family, beta-barrel domain NJ56_RS06255 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NJ56_RS06260 PF00231 ATP synthase NJ56_RS06270 PF02874 ATP synthase alpha/beta family, beta-barrel domain NJ56_RS06270 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NJ56_RS06275 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain NJ56_RS06275 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain NJ56_RS06280 PF00132 Bacterial transferase hexapeptide (six repeats) NJ56_RS06280 PF12804 MobA-like NTP transferase domain NJ56_RS06285 PF01380 SIS domain NJ56_RS06290 PF12849 PBP superfamily domain NJ56_RS06295 PF00528 Binding-protein-dependent transport system inner membrane component NJ56_RS06300 PF00528 Binding-protein-dependent transport system inner membrane component NJ56_RS06305 PF00005 ABC transporter NJ56_RS06310 PF01895 PhoU domain NJ56_RS06315 PF00497 Bacterial extracellular solute-binding proteins, family 3 NJ56_RS06320 PF00528 Binding-protein-dependent transport system inner membrane component NJ56_RS06325 PF00528 Binding-protein-dependent transport system inner membrane component NJ56_RS06330 PF00860 Permease family NJ56_RS06335 PF02203 Tar ligand binding domain homologue NJ56_RS06335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NJ56_RS06335 PF00672 HAMP domain NJ56_RS06345 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain NJ56_RS06345 PF02753 Pili assembly chaperone PapD, C-terminal domain NJ56_RS06350 PF13953 PapC C-terminal domain NJ56_RS06350 PF13954 PapC N-terminal domain NJ56_RS06350 PF00577 Outer membrane usher protein NJ56_RS06360 PF12631 MnmE helical domain NJ56_RS06360 PF10396 GTP-binding protein TrmE N-terminus NJ56_RS06360 PF01926 50S ribosome-binding GTPase NJ56_RS06365 PF14849 YidC periplasmic domain NJ56_RS06365 PF02096 60Kd inner membrane protein NJ56_RS06370 PF01809 Putative membrane protein insertion efficiency factor NJ56_RS06375 PF00825 Ribonuclease P NJ56_RS06380 PF00468 Ribosomal protein L34 NJ56_RS06390 PF08299 Bacterial dnaA protein helix-turn-helix NJ56_RS06390 PF11638 DnaA N-terminal domain NJ56_RS06390 PF00308 Bacterial dnaA protein NJ56_RS06395 PF00712 DNA polymerase III beta subunit, N-terminal domain NJ56_RS06395 PF02768 DNA polymerase III beta subunit, C-terminal domain NJ56_RS06395 PF02767 DNA polymerase III beta subunit, central domain NJ56_RS06400 PF02463 RecF/RecN/SMC N terminal domain NJ56_RS06405 PF01751 Toprim domain NJ56_RS06405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NJ56_RS06405 PF18053 DNA gyrase B subunit insert domain NJ56_RS06405 PF00986 DNA gyrase B subunit, carboxyl terminus NJ56_RS06405 PF00204 DNA gyrase B NJ56_RS06415 PF07676 WD40-like Beta Propeller Repeat NJ56_RS06415 PF12566 Protein of unknown function (DUF3748) NJ56_RS06420 PF07119 Protein of unknown function (DUF1375) NJ56_RS06425 PF00011 Hsp20/alpha crystallin family NJ56_RS06430 PF00011 Hsp20/alpha crystallin family NJ56_RS06435 PF06826 Predicted Permease Membrane Region NJ56_RS06435 PF02080 TrkA-C domain NJ56_RS06440 PF00155 Aminotransferase class I and II NJ56_RS06445 PF13488 Glycine zipper NJ56_RS06445 PF00691 OmpA family NJ56_RS06465 PF03352 Methyladenine glycosylase NJ56_RS06475 PF02091 Glycyl-tRNA synthetase alpha subunit NJ56_RS06480 PF05746 DALR anticodon binding domain NJ56_RS06480 PF02092 Glycyl-tRNA synthetase beta subunit NJ56_RS06485 PF11254 Protein of unknown function (DUF3053) NJ56_RS06515 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NJ56_RS06515 PF02378 Phosphotransferase system, EIIC NJ56_RS06515 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NJ56_RS06520 PF01232 Mannitol dehydrogenase Rossmann domain NJ56_RS06520 PF08125 Mannitol dehydrogenase C-terminal domain NJ56_RS06525 PF05068 Mannitol repressor NJ56_RS06530 PF10928 Protein of unknown function (DUF2810) NJ56_RS06535 PF03473 MOSC domain NJ56_RS06535 PF03475 3-alpha domain NJ56_RS06540 PF00672 HAMP domain NJ56_RS06540 PF02203 Tar ligand binding domain homologue NJ56_RS06540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NJ56_RS06545 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NJ56_RS06545 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NJ56_RS06550 PF02634 FdhD/NarQ family NJ56_RS06555 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NJ56_RS06555 PF00384 Molybdopterin oxidoreductase NJ56_RS06555 PF01568 Molydopterin dinucleotide binding domain NJ56_RS06560 PF00384 Molybdopterin oxidoreductase NJ56_RS06560 PF01568 Molydopterin dinucleotide binding domain NJ56_RS06560 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NJ56_RS06565 PF13247 4Fe-4S dicluster domain NJ56_RS06565 PF09163 Formate dehydrogenase N, transmembrane NJ56_RS06570 PF01292 Prokaryotic cytochrome b561 NJ56_RS06575 PF04216 Protein involved in formate dehydrogenase formation NJ56_RS06580 PF03841 L-seryl-tRNA selenium transferase NJ56_RS06580 PF12390 Selenocysteine synthase N terminal NJ56_RS06585 PF03144 Elongation factor Tu domain 2 NJ56_RS06585 PF00009 Elongation factor Tu GTP binding domain NJ56_RS06585 PF09106 Elongation factor SelB, winged helix NJ56_RS06585 PF09107 Elongation factor SelB, winged helix NJ56_RS06590 PF01427 D-ala-D-ala dipeptidase NJ56_RS06595 PF07690 Major Facilitator Superfamily NJ56_RS06600 PF01757 Acyltransferase family NJ56_RS06605 PF13356 Arm DNA-binding domain NJ56_RS06605 PF00589 Phage integrase family NJ56_RS06625 PF17392 Urocanase C-terminal domain NJ56_RS06625 PF17391 Urocanase N-terminal domain NJ56_RS06625 PF01175 Urocanase Rossmann-like domain NJ56_RS06630 PF00221 Aromatic amino acid lyase NJ56_RS06635 PF00324 Amino acid permease NJ56_RS06645 PF12146 Serine aminopeptidase, S33 NJ56_RS06650 PF08019 Phosphoethanolamine transferase EptA/EptB NJ56_RS06650 PF00884 Sulfatase NJ56_RS06655 PF00196 Bacterial regulatory proteins, luxR family NJ56_RS06655 PF00072 Response regulator receiver domain NJ56_RS06660 PF05231 MASE1 NJ56_RS06660 PF07730 Histidine kinase NJ56_RS06660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NJ56_RS06665 PF07690 Major Facilitator Superfamily NJ56_RS06675 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NJ56_RS06680 PF00528 Binding-protein-dependent transport system inner membrane component NJ56_RS06685 PF12911 N-terminal TM domain of oligopeptide transport permease C NJ56_RS06685 PF00528 Binding-protein-dependent transport system inner membrane component NJ56_RS06690 PF00005 ABC transporter NJ56_RS06690 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NJ56_RS06695 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NJ56_RS06695 PF00005 ABC transporter NJ56_RS06700 PF11658 Cellulose biosynthesis protein BcsG NJ56_RS06705 PF11120 Cellulose biosynthesis protein BcsF NJ56_RS06710 PF10995 Cellulose biosynthesis GIL NJ56_RS06720 PF06564 Cellulose biosynthesis protein BcsQ NJ56_RS06725 PF00535 Glycosyl transferase family 2 NJ56_RS06725 PF03552 Cellulose synthase NJ56_RS06725 PF07238 PilZ domain NJ56_RS06730 PF03170 Bacterial cellulose synthase subunit NJ56_RS06735 PF01270 Glycosyl hydrolases family 8 NJ56_RS06740 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) NJ56_RS06745 PF17154 Gammaproteobacterial periplasmic sensor domain NJ56_RS06745 PF00563 EAL domain NJ56_RS06745 PF00990 Diguanylate cyclase, GGDEF domain NJ56_RS06745 PF00672 HAMP domain NJ56_RS06750 PF00375 Sodium:dicarboxylate symporter family NJ56_RS06755 PF05193 Peptidase M16 inactive domain NJ56_RS06755 PF00675 Insulinase (Peptidase family M16) NJ56_RS06760 PF00294 pfkB family carbohydrate kinase NJ56_RS06765 PF01361 Tautomerase enzyme NJ56_RS06770 PF00563 EAL domain NJ56_RS06775 PF02611 CDP-diacylglycerol pyrophosphatase NJ56_RS06780 PF03631 Virulence factor BrkB NJ56_RS06785 PF03466 LysR substrate binding domain NJ56_RS06785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NJ56_RS06790 PF00375 Sodium:dicarboxylate symporter family NJ56_RS06795 PF01053 Cys/Met metabolism PLP-dependent enzyme NJ56_RS06800 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NJ56_RS06800 PF07992 Pyridine nucleotide-disulphide oxidoreductase NJ56_RS06805 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ NJ56_RS06810 PF01432 Peptidase family M3 NJ56_RS06815 PF04445 Putative SAM-dependent methyltransferase NJ56_RS06820 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NJ56_RS06820 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NJ56_RS06825 PF00582 Universal stress protein family NJ56_RS06830 PF10625 Universal stress protein B (UspB) NJ56_RS06835 PF01384 Phosphate transporter family NJ56_RS06845 PF01810 LysE type translocator NJ56_RS06850 PF00583 Acetyltransferase (GNAT) family NJ56_RS06855 PF17954 Quercetinase C-terminal cupin domain NJ56_RS06855 PF02678 Pirin NJ56_RS06860 PF00356 Bacterial regulatory proteins, lacI family NJ56_RS06860 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NJ56_RS06865 PF02447 GntP family permease NJ56_RS06885 PF01202 Shikimate kinase NJ56_RS06890 PF01914 MarC family integral membrane protein NJ56_RS06895 PF01118 Semialdehyde dehydrogenase, NAD binding domain NJ56_RS06895 PF02774 Semialdehyde dehydrogenase, dimerisation domain NJ56_RS06900 PF06580 Histidine kinase NJ56_RS06900 PF07694 5TMR of 5TMR-LYT NJ56_RS06905 PF02806 Alpha amylase, C-terminal all-beta domain NJ56_RS06905 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NJ56_RS06905 PF00128 Alpha amylase, catalytic domain NJ56_RS06910 PF00128 Alpha amylase, catalytic domain NJ56_RS06910 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NJ56_RS06910 PF18390 Glycogen debranching enzyme C-terminal domain NJ56_RS06915 PF00483 Nucleotidyl transferase NJ56_RS06920 PF00534 Glycosyl transferases group 1 NJ56_RS06920 PF08323 Starch synthase catalytic domain NJ56_RS06925 PF00343 Carbohydrate phosphorylase NJ56_RS06930 PF16901 C-terminal domain of alpha-glycerophosphate oxidase NJ56_RS06930 PF01266 FAD dependent oxidoreductase NJ56_RS06935 PF08220 DeoR-like helix-turn-helix domain NJ56_RS06935 PF00455 DeoR C terminal sensor domain NJ56_RS06940 PF01694 Rhomboid family NJ56_RS06940 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease NJ56_RS06945 PF00581 Rhodanese-like domain NJ56_RS06950 PF17874 MalT-like TPR region NJ56_RS06950 PF00196 Bacterial regulatory proteins, luxR family NJ56_RS06955 PF00343 Carbohydrate phosphorylase NJ56_RS06960 PF02446 4-alpha-glucanotransferase NJ56_RS06965 PF01106 NifU-like domain NJ56_RS06965 PF01521 Iron-sulphur cluster biosynthesis NJ56_RS06970 PF00156 Phosphoribosyl transferase domain NJ56_RS06975 PF00561 alpha/beta hydrolase fold NJ56_RS06985 PF09012 FeoC like transcriptional regulator NJ56_RS06990 PF17910 FeoB cytosolic helical domain NJ56_RS06990 PF02421 Ferrous iron transport protein B NJ56_RS06990 PF07670 Nucleoside recognition NJ56_RS06990 PF07664 Ferrous iron transport protein B C terminus NJ56_RS06995 PF04023 FeoA domain NJ56_RS07000 PF16921 Tex protein YqgF-like domain NJ56_RS07000 PF09371 Tex-like protein N-terminal domain NJ56_RS07000 PF00575 S1 RNA binding domain NJ56_RS07000 PF17674 HHH domain NJ56_RS07025 PF03449 Transcription elongation factor, N-terminal NJ56_RS07025 PF01272 Transcription elongation factor, GreA/GreB, C-term NJ56_RS07030 PF00486 Transcriptional regulatory protein, C terminal NJ56_RS07030 PF00072 Response regulator receiver domain NJ56_RS07035 PF00512 His Kinase A (phospho-acceptor) domain NJ56_RS07035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NJ56_RS07035 PF00672 HAMP domain NJ56_RS07040 PF01293 Phosphoenolpyruvate carboxykinase NJ56_RS07045 PF01430 Hsp33 protein NJ56_RS07050 PF01479 S4 domain NJ56_RS07055 PF13419 Haloacid dehalogenase-like hydrolase NJ56_RS07060 PF07095 Intracellular growth attenuator protein IgaA NJ56_RS07065 PF00293 NUDIX domain NJ56_RS07070 PF00912 Transglycosylase NJ56_RS07070 PF17092 Penicillin-binding protein OB-like domain NJ56_RS07070 PF00905 Penicillin binding protein transpeptidase domain NJ56_RS07095 PF00263 Bacterial type II and III secretion system protein NJ56_RS07095 PF03958 Bacterial type II/III secretion system short domain NJ56_RS07100 PF01202 Shikimate kinase NJ56_RS07105 PF01761 3-dehydroquinate synthase NJ56_RS07110 PF05036 Sporulation related domain NJ56_RS07115 PF02086 D12 class N6 adenine-specific DNA methyltransferase NJ56_RS07120 PF00834 Ribulose-phosphate 3 epimerase family NJ56_RS07125 PF13419 Haloacid dehalogenase-like hydrolase NJ56_RS07130 PF00579 tRNA synthetases class I (W and Y) NJ56_RS07135 PF10414 Sirohaem synthase dimerisation region NJ56_RS07135 PF14824 Sirohaem biosynthesis protein central NJ56_RS07135 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NJ56_RS07140 PF01226 Formate/nitrite transporter NJ56_RS07145 PF13806 Rieske-like [2Fe-2S] domain NJ56_RS07150 PF04324 BFD-like [2Fe-2S] binding domain NJ56_RS07150 PF07992 Pyridine nucleotide-disulphide oxidoreductase NJ56_RS07150 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NJ56_RS07150 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NJ56_RS07150 PF18267 Rubredoxin NAD+ reductase C-terminal domain NJ56_RS07155 PF07969 Amidohydrolase family NJ56_RS07160 PF07690 Major Facilitator Superfamily NJ56_RS07175 PF00356 Bacterial regulatory proteins, lacI family NJ56_RS07180 PF02056 Family 4 glycosyl hydrolase NJ56_RS07180 PF11975 Family 4 glycosyl hydrolase C-terminal domain NJ56_RS07185 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NJ56_RS07190 PF00117 Glutamine amidotransferase class-I NJ56_RS07195 PF00202 Aminotransferase class-III NJ56_RS07200 PF12805 FUSC-like inner membrane protein yccS NJ56_RS07205 PF00027 Cyclic nucleotide-binding domain NJ56_RS07205 PF13545 Crp-like helix-turn-helix domain NJ56_RS07210 PF02566 OsmC-like protein NJ56_RS07230 PF00156 Phosphoribosyl transferase domain NJ56_RS07235 PF00291 Pyridoxal-phosphate dependent enzyme NJ56_RS07240 PF00485 Phosphoribulokinase / Uridine kinase family NJ56_RS07245 PF06794 Uncharacterised protein family (UPF0270) NJ56_RS07250 PF00561 alpha/beta hydrolase fold NJ56_RS07255 PF01810 LysE type translocator NJ56_RS07260 PF01075 Glycosyltransferase family 9 (heptosyltransferase) NJ56_RS07265 PF00535 Glycosyl transferase family 2 NJ56_RS07270 PF12848 ABC transporter NJ56_RS07270 PF00005 ABC transporter NJ56_RS07275 PF02525 Flavodoxin-like fold NJ56_RS07280 PF02254 TrkA-N domain NJ56_RS07280 PF00999 Sodium/hydrogen exchanger family NJ56_RS07285 PF09526 Probable metal-binding protein (DUF2387) NJ56_RS07290 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NJ56_RS07295 PF04102 SlyX NJ56_RS07300 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NJ56_RS07300 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NJ56_RS07305 PF08348 YheO-like PAS domain NJ56_RS07305 PF13309 HTH domain NJ56_RS07310 PF02635 DsrE/DsrF-like family NJ56_RS07315 PF02635 DsrE/DsrF-like family NJ56_RS07320 PF04077 DsrH like protein NJ56_RS07325 PF00164 Ribosomal protein S12/S23 NJ56_RS07330 PF00177 Ribosomal protein S7p/S5e NJ56_RS07335 PF03764 Elongation factor G, domain IV NJ56_RS07335 PF03144 Elongation factor Tu domain 2 NJ56_RS07335 PF14492 Elongation Factor G, domain II NJ56_RS07335 PF00679 Elongation factor G C-terminus NJ56_RS07335 PF00009 Elongation factor Tu GTP binding domain NJ56_RS07345 PF00009 Elongation factor Tu GTP binding domain NJ56_RS07345 PF03144 Elongation factor Tu domain 2 NJ56_RS07345 PF03143 Elongation factor Tu C-terminal domain NJ56_RS07350 PF04324 BFD-like [2Fe-2S] binding domain NJ56_RS07355 PF00210 Ferritin-like domain NJ56_RS07360 PF00338 Ribosomal protein S10p/S20e NJ56_RS07365 PF00297 Ribosomal protein L3 NJ56_RS07370 PF00573 Ribosomal protein L4/L1 family NJ56_RS07375 PF00276 Ribosomal protein L23 NJ56_RS07380 PF03947 Ribosomal Proteins L2, C-terminal domain NJ56_RS07380 PF00181 Ribosomal Proteins L2, RNA binding domain NJ56_RS07385 PF00203 Ribosomal protein S19 NJ56_RS07390 PF00237 Ribosomal protein L22p/L17e NJ56_RS07395 PF00189 Ribosomal protein S3, C-terminal domain NJ56_RS07395 PF07650 KH domain NJ56_RS07400 PF00252 Ribosomal protein L16p/L10e NJ56_RS07405 PF00831 Ribosomal L29 protein NJ56_RS07410 PF00366 Ribosomal protein S17 NJ56_RS07415 PF00238 Ribosomal protein L14p/L23e NJ56_RS07420 PF00467 KOW motif NJ56_RS07420 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 NJ56_RS07425 PF00673 ribosomal L5P family C-terminus NJ56_RS07425 PF00281 Ribosomal protein L5 NJ56_RS07430 PF00253 Ribosomal protein S14p/S29e NJ56_RS07435 PF00410 Ribosomal protein S8 NJ56_RS07440 PF00347 Ribosomal protein L6 NJ56_RS07445 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast NJ56_RS07450 PF03719 Ribosomal protein S5, C-terminal domain NJ56_RS07450 PF00333 Ribosomal protein S5, N-terminal domain NJ56_RS07455 PF00327 Ribosomal protein L30p/L7e NJ56_RS07460 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A NJ56_RS07465 PF00344 SecY translocase NJ56_RS07470 PF00444 Ribosomal protein L36 NJ56_RS07475 PF00416 Ribosomal protein S13/S18 NJ56_RS07480 PF00411 Ribosomal protein S11 NJ56_RS07485 PF01479 S4 domain NJ56_RS07485 PF00163 Ribosomal protein S4/S9 N-terminal domain NJ56_RS07490 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain NJ56_RS07490 PF01000 RNA polymerase Rpb3/RpoA insert domain NJ56_RS07490 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain NJ56_RS07495 PF01196 Ribosomal protein L17 NJ56_RS07500 PF13411 MerR HTH family regulatory protein NJ56_RS07505 PF03889 Alternative ribosome-rescue factor A NJ56_RS07510 PF01741 Large-conductance mechanosensitive channel, MscL NJ56_RS07515 PF02080 TrkA-C domain NJ56_RS07515 PF02254 TrkA-N domain NJ56_RS07520 PF01189 16S rRNA methyltransferase RsmB/F NJ56_RS07520 PF01029 NusB family NJ56_RS07525 PF02911 Formyl transferase, C-terminal domain NJ56_RS07525 PF00551 Formyl transferase NJ56_RS07530 PF01327 Polypeptide deformylase NJ56_RS07535 PF17782 DprA winged helix domain NJ56_RS07535 PF02481 DNA recombination-mediator protein A NJ56_RS07540 PF04361 Protein of unknown function (DUF494) NJ56_RS07545 PF01396 Topoisomerase DNA binding C4 zinc finger NJ56_RS07550 PF01300 Telomere recombination NJ56_RS07555 PF08501 Shikimate dehydrogenase substrate binding domain NJ56_RS07555 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NJ56_RS07555 PF01488 Shikimate / quinate 5-dehydrogenase NJ56_RS07560 PF00132 Bacterial transferase hexapeptide (six repeats) NJ56_RS07600 PF04204 Homoserine O-succinyltransferase NJ56_RS07605 PF01274 Malate synthase NJ56_RS07610 PF00463 Isocitrate lyase family NJ56_RS07615 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) NJ56_RS07620 PF09339 IclR helix-turn-helix domain NJ56_RS07620 PF01614 Bacterial transcriptional regulator NJ56_RS07625 PF02574 Homocysteine S-methyltransferase NJ56_RS07625 PF00809 Pterin binding enzyme NJ56_RS07625 PF02965 Vitamin B12 dependent methionine synthase, activation domain NJ56_RS07625 PF02310 B12 binding domain NJ56_RS07625 PF02607 B12 binding domain NJ56_RS07640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NJ56_RS07640 PF03466 LysR substrate binding domain NJ56_RS07645 PF03400 IS1 transposase NJ56_RS07725 PF17862 AAA+ lid domain NJ56_RS07725 PF01434 Peptidase family M41 NJ56_RS07725 PF00004 ATPase family associated with various cellular activities (AAA) NJ56_RS07735 PF04488 Glycosyltransferase sugar-binding region containing DXD motif NJ56_RS07745 PF09134 Invasin, domain 3 NJ56_RS07745 PF11924 Inverse autotransporter, beta-domain NJ56_RS07745 PF02369 Bacterial Ig-like domain (group 1) NJ56_RS07745 PF07979 Intimin C-type lectin domain NJ56_RS07755 PF00872 Transposase, Mutator family NJ56_RS07760 PF13332 Hemagglutinin repeat NJ56_RS07760 PF05860 haemagglutination activity domain NJ56_RS07765 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB NJ56_RS07765 PF17287 POTRA domain NJ56_RS07765 PF08479 POTRA domain, ShlB-type NJ56_RS07770 PF01842 ACT domain NJ56_RS07770 PF00696 Amino acid kinase family NJ56_RS07775 PF00342 Phosphoglucose isomerase NJ56_RS07780 PF06146 Phosphate-starvation-inducible E NJ56_RS07785 PF00528 Binding-protein-dependent transport system inner membrane component NJ56_RS07790 PF14785 Maltose transport system permease protein MalF P2 domain NJ56_RS07790 PF00528 Binding-protein-dependent transport system inner membrane component NJ56_RS07795 PF01547 Bacterial extracellular solute-binding protein NJ56_RS07805 PF00005 ABC transporter NJ56_RS07805 PF17912 MalK OB fold domain NJ56_RS07810 PF02264 LamB porin NJ56_RS07815 PF07148 Maltose operon periplasmic protein precursor (MalM) NJ56_RS07820 PF04345 Chorismate lyase NJ56_RS07825 PF01040 UbiA prenyltransferase family NJ56_RS07830 PF01553 Acyltransferase NJ56_RS07835 PF01219 Prokaryotic diacylglycerol kinase NJ56_RS07840 PF01726 LexA DNA binding domain NJ56_RS07840 PF00717 Peptidase S24-like NJ56_RS07845 PF01475 Ferric uptake regulator family NJ56_RS07850 PF01207 Dihydrouridine synthase (Dus) NJ56_RS07855 PF09583 Phage shock protein G (Phageshock_PspG) NJ56_RS07860 PF08240 Alcohol dehydrogenase GroES-like domain NJ56_RS07860 PF00107 Zinc-binding dehydrogenase NJ56_RS07865 PF03796 DnaB-like helicase C terminal domain NJ56_RS07865 PF00772 DnaB-like helicase N terminal domain NJ56_RS07870 PF00842 Alanine racemase, C-terminal domain NJ56_RS07870 PF01168 Alanine racemase, N-terminal domain NJ56_RS07875 PF00155 Aminotransferase class I and II NJ56_RS07880 PF04237 YjbR NJ56_RS07885 PF00005 ABC transporter NJ56_RS07885 PF17755 UvrA DNA-binding domain NJ56_RS07885 PF17760 UvrA interaction domain NJ56_RS07890 PF00436 Single-strand binding protein family NJ56_RS07900 PF00860 Permease family NJ56_RS07905 PF00999 Sodium/hydrogen exchanger family NJ56_RS07910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NJ56_RS07910 PF03466 LysR substrate binding domain NJ56_RS07915 PF03788 LrgA family NJ56_RS07920 PF04172 LrgB-like family NJ56_RS07925 PF00484 Carbonic anhydrase NJ56_RS07930 PF03279 Bacterial lipid A biosynthesis acyltransferase NJ56_RS07940 PF02954 Bacterial regulatory protein, Fis family NJ56_RS07945 PF01207 Dihydrouridine synthase (Dus) NJ56_RS07955 PF00474 Sodium:solute symporter family NJ56_RS07960 PF06196 Protein of unknown function (DUF997) NJ56_RS07965 PF02785 Biotin carboxylase C-terminal domain NJ56_RS07965 PF00289 Biotin carboxylase, N-terminal domain NJ56_RS07965 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NJ56_RS07970 PF00364 Biotin-requiring enzyme NJ56_RS07975 PF01220 Dehydroquinase class II NJ56_RS07980 PF01794 Ferric reductase like transmembrane component NJ56_RS07985 PF00174 Oxidoreductase molybdopterin binding domain NJ56_RS07990 PF00107 Zinc-binding dehydrogenase NJ56_RS07990 PF08240 Alcohol dehydrogenase GroES-like domain NJ56_RS07995 PF00563 EAL domain NJ56_RS07995 PF00990 Diguanylate cyclase, GGDEF domain NJ56_RS07995 PF17157 Gammaproteobacterial periplasmic sensor domain NJ56_RS08005 PF04085 rod shape-determining protein MreC NJ56_RS08010 PF04093 rod shape-determining protein MreD NJ56_RS08015 PF02545 Maf-like protein NJ56_RS08020 PF10150 Ribonuclease E/G family NJ56_RS08020 PF00575 S1 RNA binding domain NJ56_RS08025 PF13116 Protein of unknown function NJ56_RS08025 PF13502 AsmA-like C-terminal region NJ56_RS08030 PF00795 Carbon-nitrogen hydrolase NJ56_RS08035 PF01523 Putative modulator of DNA gyrase NJ56_RS08040 PF03466 LysR substrate binding domain NJ56_RS08040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NJ56_RS08045 PF07869 Protein of unknown function (DUF1656) NJ56_RS08050 PF13533 Biotin-lipoyl like NJ56_RS08055 PF04632 Fusaric acid resistance protein family NJ56_RS08060 PF00171 Aldehyde dehydrogenase family NJ56_RS08065 PF00545 ribonuclease NJ56_RS08070 PF01337 Barstar (barnase inhibitor) NJ56_RS08075 PF04751 Protein of unknown function (DUF615) NJ56_RS08080 PF01523 Putative modulator of DNA gyrase NJ56_RS08085 PF07361 Cytochrome b562 NJ56_RS08090 PF01272 Transcription elongation factor, GreA/GreB, C-term NJ56_RS08090 PF14760 Rnk N-terminus NJ56_RS08105 PF00689 Cation transporting ATPase, C-terminus NJ56_RS08105 PF00690 Cation transporter/ATPase, N-terminus NJ56_RS08110 PF00356 Bacterial regulatory proteins, lacI family NJ56_RS08115 PF02378 Phosphotransferase system, EIIC NJ56_RS08115 PF00367 phosphotransferase system, EIIB NJ56_RS08120 PF11941 Domain of unknown function (DUF3459) NJ56_RS08120 PF00128 Alpha amylase, catalytic domain NJ56_RS08125 PF01042 Endoribonuclease L-PSP NJ56_RS08130 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain NJ56_RS08130 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain NJ56_RS08135 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NJ56_RS08135 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NJ56_RS08140 PF00381 PTS HPr component phosphorylation site NJ56_RS08145 PF03668 P-loop ATPase protein family NJ56_RS08150 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NJ56_RS08155 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein NJ56_RS08160 PF04552 Sigma-54, DNA binding domain NJ56_RS08160 PF04963 Sigma-54 factor, core binding domain NJ56_RS08160 PF00309 Sigma-54 factor, Activator interacting domain (AID) NJ56_RS08165 PF00005 ABC transporter NJ56_RS08165 PF12399 Branched-chain amino acid ATP-binding cassette transporter NJ56_RS08170 PF03968 OstA-like protein NJ56_RS08175 PF06835 Lipopolysaccharide-assembly, LptC-related NJ56_RS08185 PF01380 SIS domain NJ56_RS08185 PF00571 CBS domain NJ56_RS08190 PF01699 Sodium/calcium exchanger protein NJ56_RS08195 PF00005 ABC transporter NJ56_RS08200 PF02405 Permease MlaE NJ56_RS08205 PF02470 MlaD protein NJ56_RS08210 PF05494 MlaC protein NJ56_RS08215 PF13466 STAS domain NJ56_RS08220 PF01722 BolA-like protein NJ56_RS08225 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NJ56_RS08230 PF13180 PDZ domain NJ56_RS08235 PF13180 PDZ domain NJ56_RS08235 PF00595 PDZ domain NJ56_RS08240 PF06295 Protein of unknown function (DUF1043) NJ56_RS08245 PF03969 AFG1-like ATPase NJ56_RS08255 PF00572 Ribosomal protein L13 NJ56_RS08260 PF00380 Ribosomal protein S9/S16 NJ56_RS08265 PF00043 Glutathione S-transferase, C-terminal domain NJ56_RS08265 PF02798 Glutathione S-transferase, N-terminal domain NJ56_RS08270 PF04386 Stringent starvation protein B NJ56_RS08280 PF07992 Pyridine nucleotide-disulphide oxidoreductase NJ56_RS08280 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NJ56_RS08285 PF01645 Conserved region in glutamate synthase NJ56_RS08285 PF00310 Glutamine amidotransferases class-II NJ56_RS08285 PF01493 GXGXG motif NJ56_RS08285 PF04898 Glutamate synthase central domain NJ56_RS08290 PF04055 Radical SAM superfamily NJ56_RS08290 PF16199 Radical_SAM C-terminal domain NJ56_RS08295 PF00072 Response regulator receiver domain NJ56_RS08295 PF18415 Histidine kinase receptor ArcB trans-membrane domain NJ56_RS08295 PF00989 PAS fold NJ56_RS08295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NJ56_RS08295 PF00512 His Kinase A (phospho-acceptor) domain NJ56_RS08295 PF01627 Hpt domain NJ56_RS08310 PF00912 Transglycosylase NJ56_RS08315 PF04972 BON domain NJ56_RS08320 PF13580 SIS domain NJ56_RS08325 PF02021 Uncharacterised protein family UPF0102 NJ56_RS08330 PF04348 LppC putative lipoprotein NJ56_RS08335 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NJ56_RS08345 PF17954 Quercetinase C-terminal cupin domain NJ56_RS08345 PF02678 Pirin NJ56_RS08350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NJ56_RS08350 PF03466 LysR substrate binding domain NJ56_RS08355 PF07681 DoxX NJ56_RS08360 PF13997 YqjK-like protein NJ56_RS08365 PF07332 Putative Actinobacterial Holin-X, holin superfamily III NJ56_RS08370 PF05957 Bacterial protein of unknown function (DUF883) NJ56_RS08380 PF13721 SecD export protein N-terminal TM region NJ56_RS08385 PF09335 SNARE associated Golgi protein NJ56_RS08395 PF00392 Bacterial regulatory proteins, gntR family NJ56_RS08395 PF07729 FCD domain NJ56_RS08400 PF07690 Major Facilitator Superfamily NJ56_RS08405 PF02614 Glucuronate isomerase NJ56_RS08410 PF01232 Mannitol dehydrogenase Rossmann domain NJ56_RS08410 PF08125 Mannitol dehydrogenase C-terminal domain NJ56_RS08415 PF08666 SAF domain NJ56_RS08415 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus NJ56_RS08420 PF10688 Bacterial inner membrane protein NJ56_RS08425 PF00375 Sodium:dicarboxylate symporter family NJ56_RS08430 PF03741 Integral membrane protein TerC family NJ56_RS08435 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NJ56_RS08440 PF01863 Protein of unknown function DUF45 NJ56_RS08450 PF05175 Methyltransferase small domain NJ56_RS08455 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NJ56_RS08455 PF07992 Pyridine nucleotide-disulphide oxidoreductase NJ56_RS08460 PF17287 POTRA domain NJ56_RS08460 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB NJ56_RS08460 PF08479 POTRA domain, ShlB-type NJ56_RS08485 PF10410 DnaB-helicase binding domain of primase NJ56_RS08485 PF08275 DNA primase catalytic core, N-terminal domain NJ56_RS08485 PF01807 CHC2 zinc finger NJ56_RS08490 PF13495 Phage integrase, N-terminal SAM-like domain NJ56_RS08490 PF00589 Phage integrase family NJ56_RS08520 PF01807 CHC2 zinc finger NJ56_RS08520 PF08275 DNA primase catalytic core, N-terminal domain NJ56_RS08520 PF10410 DnaB-helicase binding domain of primase NJ56_RS08530 PF08275 DNA primase catalytic core, N-terminal domain NJ56_RS08530 PF01807 CHC2 zinc finger NJ56_RS08530 PF10410 DnaB-helicase binding domain of primase NJ56_RS08535 PF13495 Phage integrase, N-terminal SAM-like domain NJ56_RS08535 PF00589 Phage integrase family NJ56_RS08605 PF00106 short chain dehydrogenase NJ56_RS08630 PF03979 Sigma-70 factor, region 1.1 NJ56_RS08630 PF00140 Sigma-70 factor, region 1.2 NJ56_RS08630 PF04546 Sigma-70, non-essential region NJ56_RS08630 PF04539 Sigma-70 region 3 NJ56_RS08630 PF04545 Sigma-70, region 4 NJ56_RS08630 PF04542 Sigma-70 region 2 NJ56_RS08635 PF08275 DNA primase catalytic core, N-terminal domain NJ56_RS08635 PF01807 CHC2 zinc finger NJ56_RS08635 PF10410 DnaB-helicase binding domain of primase NJ56_RS08635 PF08278 DNA primase DnaG DnaB-binding NJ56_RS08640 PF01165 Ribosomal protein S21 NJ56_RS08645 PF00814 Glycoprotease family NJ56_RS08650 PF02660 Glycerol-3-phosphate acyltransferase NJ56_RS08655 PF02152 Dihydroneopterin aldolase NJ56_RS08660 PF02673 Bacitracin resistance protein BacA NJ56_RS08665 PF12627 Probable RNA and SrmB- binding site of polymerase A NJ56_RS08665 PF01966 HD domain NJ56_RS08665 PF01743 Poly A polymerase head domain NJ56_RS08670 PF08239 Bacterial SH3 domain NJ56_RS08675 PF01928 CYTH domain NJ56_RS08680 PF08335 GlnD PII-uridylyltransferase NJ56_RS08680 PF03710 Glutamate-ammonia ligase adenylyltransferase NJ56_RS08685 PF00294 pfkB family carbohydrate kinase NJ56_RS08685 PF01467 Cytidylyltransferase-like NJ56_RS08695 PF04380 Membrane fusogenic activity NJ56_RS08700 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NJ56_RS08705 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase NJ56_RS08710 PF03738 Glutathionylspermidine synthase preATP-grasp NJ56_RS08715 PF06693 Protein of unknown function (DUF1190) NJ56_RS08720 PF02321 Outer membrane efflux protein NJ56_RS08725 PF00293 NUDIX domain NJ56_RS08730 PF06853 Protein of unknown function (DUF1249) NJ56_RS08735 PF00149 Calcineurin-like phosphoesterase NJ56_RS08740 PF05728 Uncharacterised protein family (UPF0227) NJ56_RS08745 PF01751 Toprim domain NJ56_RS08745 PF00204 DNA gyrase B NJ56_RS08745 PF00986 DNA gyrase B subunit, carboxyl terminus NJ56_RS08745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NJ56_RS08750 PF03466 LysR substrate binding domain NJ56_RS08750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NJ56_RS08755 PF02525 Flavodoxin-like fold NJ56_RS08765 PF00521 DNA gyrase/topoisomerase IV, subunit A NJ56_RS08765 PF03989 DNA gyrase C-terminal domain, beta-propeller NJ56_RS08770 PF01553 Acyltransferase NJ56_RS08775 PF07732 Multicopper oxidase NJ56_RS08775 PF07731 Multicopper oxidase NJ56_RS08780 PF11842 Domain of unknown function (DUF3362) NJ56_RS08780 PF04055 Radical SAM superfamily NJ56_RS08780 PF08497 Radical SAM N-terminal NJ56_RS08785 PF00248 Aldo/keto reductase family NJ56_RS08790 PF00465 Iron-containing alcohol dehydrogenase NJ56_RS08795 PF12833 Helix-turn-helix domain NJ56_RS08795 PF06719 AraC-type transcriptional regulator N-terminus NJ56_RS08800 PF09335 SNARE associated Golgi protein NJ56_RS08805 PF01053 Cys/Met metabolism PLP-dependent enzyme NJ56_RS08810 PF01618 MotA/TolQ/ExbB proton channel family NJ56_RS08815 PF02472 Biopolymer transport protein ExbD/TolR NJ56_RS08850 PF00437 Type II/IV secretion system protein NJ56_RS08865 PF04972 BON domain NJ56_RS08865 PF13629 Pilus formation protein N terminal region NJ56_RS08865 PF00263 Bacterial type II and III secretion system protein NJ56_RS08890 PF08501 Shikimate dehydrogenase substrate binding domain NJ56_RS08895 PF07715 TonB-dependent Receptor Plug Domain NJ56_RS08895 PF00593 TonB dependent receptor NJ56_RS08900 PF00756 Putative esterase NJ56_RS08900 PF11806 Domain of unknown function (DUF3327) NJ56_RS08905 PF03621 MbtH-like protein NJ56_RS08910 PF00550 Phosphopantetheine attachment site NJ56_RS08910 PF00501 AMP-binding enzyme NJ56_RS08910 PF13193 AMP-binding enzyme C-terminal domain NJ56_RS08910 PF00975 Thioesterase domain NJ56_RS08910 PF00668 Condensation domain NJ56_RS08920 PF00005 ABC transporter NJ56_RS08925 PF01032 FecCD transport family NJ56_RS08930 PF01032 FecCD transport family NJ56_RS08935 PF05977 Transmembrane secretion effector NJ56_RS08940 PF01497 Periplasmic binding protein NJ56_RS08945 PF00425 chorismate binding enzyme NJ56_RS08950 PF13193 AMP-binding enzyme C-terminal domain NJ56_RS08950 PF00501 AMP-binding enzyme NJ56_RS08955 PF00550 Phosphopantetheine attachment site NJ56_RS08955 PF00857 Isochorismatase family NJ56_RS08965 PF00550 Phosphopantetheine attachment site NJ56_RS08965 PF00501 AMP-binding enzyme NJ56_RS08965 PF13193 AMP-binding enzyme C-terminal domain NJ56_RS08965 PF00668 Condensation domain NJ56_RS08965 PF00975 Thioesterase domain NJ56_RS08970 PF00291 Pyridoxal-phosphate dependent enzyme NJ56_RS08975 PF01490 Transmembrane amino acid transporter protein NJ56_RS08980 PF00871 Acetokinase family NJ56_RS08985 PF02901 Pyruvate formate lyase-like NJ56_RS08985 PF01228 Glycine radical NJ56_RS08990 PF00294 pfkB family carbohydrate kinase NJ56_RS08995 PF00571 CBS domain NJ56_RS08995 PF01380 SIS domain NJ56_RS09000 PF08220 DeoR-like helix-turn-helix domain NJ56_RS09000 PF00455 DeoR C terminal sensor domain NJ56_RS09005 PF06923 Glucitol operon activator protein (GutM) NJ56_RS09010 PF00106 short chain dehydrogenase NJ56_RS09015 PF03829 PTS system glucitol/sorbitol-specific IIA component NJ56_RS09020 PF07663 Sorbitol phosphotransferase enzyme II C-terminus NJ56_RS09020 PF03612 Sorbitol phosphotransferase enzyme II N-terminus NJ56_RS09025 PF03608 PTS system enzyme II sorbitol-specific factor NJ56_RS09035 PF16456 YmgD protein NJ56_RS09050 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain NJ56_RS09050 PF01464 Transglycosylase SLT domain NJ56_RS09055 PF04362 Bacterial Fe(2+) trafficking NJ56_RS09060 PF00633 Helix-hairpin-helix motif NJ56_RS09060 PF00730 HhH-GPD superfamily base excision DNA repair protein NJ56_RS09060 PF14815 NUDIX domain NJ56_RS09060 PF10576 Iron-sulfur binding domain of endonuclease III NJ56_RS09065 PF02390 Putative methyltransferase NJ56_RS09070 PF04320 Protein with unknown function (DUF469) NJ56_RS09075 PF04960 Glutaminase NJ56_RS09080 PF11101 Protein of unknown function (DUF2884) NJ56_RS09085 PF04055 Radical SAM superfamily NJ56_RS09085 PF06969 HemN C-terminal domain NJ56_RS09090 PF01725 Ham1 family NJ56_RS09095 PF02594 Uncharacterised ACR, YggU family COG1872 NJ56_RS09100 PF02325 YGGT family NJ56_RS09105 PF14748 Pyrroline-5-carboxylate reductase dimerisation NJ56_RS09105 PF03807 NADP oxidoreductase coenzyme F420-dependent NJ56_RS09110 PF01168 Alanine racemase, N-terminal domain NJ56_RS09115 PF00437 Type II/IV secretion system protein NJ56_RS09120 PF04371 Porphyromonas-type peptidyl-arginine deiminase NJ56_RS09125 PF00795 Carbon-nitrogen hydrolase NJ56_RS09130 PF03652 Holliday junction resolvase NJ56_RS09135 PF02622 Uncharacterized ACR, COG1678 NJ56_RS09140 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain NJ56_RS09140 PF02951 Prokaryotic glutathione synthetase, N-terminal domain NJ56_RS09145 PF04452 RNA methyltransferase NJ56_RS09150 PF04231 Endonuclease I NJ56_RS09155 PF17283 SprT-like zinc ribbon domain NJ56_RS09155 PF10263 SprT-like family NJ56_RS09165 PF04143 Sulphur transport NJ56_RS09175 PF00438 S-adenosylmethionine synthetase, N-terminal domain NJ56_RS09175 PF02773 S-adenosylmethionine synthetase, C-terminal domain NJ56_RS09175 PF02772 S-adenosylmethionine synthetase, central domain NJ56_RS09180 PF17944 Arginine decarboxylase C-terminal helical extension NJ56_RS09180 PF17810 Arginine decarboxylase helical bundle domain NJ56_RS09180 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NJ56_RS09190 PF02780 Transketolase, C-terminal domain NJ56_RS09190 PF00456 Transketolase, thiamine diphosphate binding domain NJ56_RS09190 PF02779 Transketolase, pyrimidine binding domain NJ56_RS09195 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NJ56_RS09195 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NJ56_RS09200 PF00162 Phosphoglycerate kinase NJ56_RS09205 PF01116 Fructose-bisphosphate aldolase class-II NJ56_RS09210 PF05552 Conserved TM helix NJ56_RS09210 PF00924 Mechanosensitive ion channel NJ56_RS09215 PF01810 LysE type translocator NJ56_RS09220 PF04402 Protein of unknown function (DUF541) NJ56_RS09225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NJ56_RS09225 PF03466 LysR substrate binding domain NJ56_RS09230 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) NJ56_RS09235 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NJ56_RS09235 PF01842 ACT domain NJ56_RS09235 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NJ56_RS09240 PF01812 5-formyltetrahydrofolate cyclo-ligase family NJ56_RS09250 PF05164 Cell division protein ZapA NJ56_RS09255 PF03695 Uncharacterised protein family (UPF0149) NJ56_RS09260 PF00557 Metallopeptidase family M24 NJ56_RS09260 PF05195 Aminopeptidase P, N-terminal domain NJ56_RS09265 PF01494 FAD binding domain NJ56_RS09270 PF01494 FAD binding domain NJ56_RS09275 PF01571 Aminomethyltransferase folate-binding domain NJ56_RS09275 PF08669 Glycine cleavage T-protein C-terminal barrel domain NJ56_RS09280 PF01597 Glycine cleavage H-protein NJ56_RS09285 PF02347 Glycine cleavage system P-protein NJ56_RS09295 PF03006 Haemolysin-III related NJ56_RS09300 PF01571 Aminomethyltransferase folate-binding domain NJ56_RS09305 PF03937 Flavinator of succinate dehydrogenase NJ56_RS09310 PF07254 Membrane-bound toxin component of toxin-antitoxin system NJ56_RS09315 PF00258 Flavodoxin NJ56_RS09320 PF02899 Phage integrase, N-terminal SAM-like domain NJ56_RS09320 PF00589 Phage integrase family NJ56_RS09325 PF10411 Disulfide bond isomerase protein N-terminus NJ56_RS09325 PF13098 Thioredoxin-like domain NJ56_RS09330 PF17768 RecJ OB domain NJ56_RS09330 PF02272 DHHA1 domain NJ56_RS09330 PF01368 DHH family NJ56_RS09340 PF01336 OB-fold nucleic acid binding domain NJ56_RS09340 PF00152 tRNA synthetases class II (D, K and N) NJ56_RS09350 PF02405 Permease MlaE NJ56_RS09355 PF00005 ABC transporter NJ56_RS09380 PF00263 Bacterial type II and III secretion system protein NJ56_RS09380 PF03958 Bacterial type II/III secretion system short domain NJ56_RS09385 PF00437 Type II/IV secretion system protein NJ56_RS09390 PF00482 Type II secretion system (T2SS), protein F NJ56_RS09395 PF08334 Type II secretion system (T2SS), protein G NJ56_RS09395 PF07963 Prokaryotic N-terminal methylation motif NJ56_RS09405 PF02501 Type II secretion system (T2SS), protein I NJ56_RS09405 PF07963 Prokaryotic N-terminal methylation motif NJ56_RS09410 PF11612 Type II secretion system (T2SS), protein J NJ56_RS09410 PF07963 Prokaryotic N-terminal methylation motif NJ56_RS09450 PF03466 LysR substrate binding domain NJ56_RS09450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NJ56_RS09455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NJ56_RS09455 PF03466 LysR substrate binding domain NJ56_RS09460 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NJ56_RS09460 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NJ56_RS09465 PF00356 Bacterial regulatory proteins, lacI family NJ56_RS09475 PF13193 AMP-binding enzyme C-terminal domain NJ56_RS09475 PF00501 AMP-binding enzyme NJ56_RS09475 PF01553 Acyltransferase NJ56_RS09480 PF07690 Major Facilitator Superfamily NJ56_RS09485 PF00248 Aldo/keto reductase family NJ56_RS09490 PF03741 Integral membrane protein TerC family NJ56_RS09495 PF02976 DNA mismatch repair enzyme MutH NJ56_RS09505 PF00293 NUDIX domain NJ56_RS09510 PF01590 GAF domain NJ56_RS09510 PF05524 PEP-utilising enzyme, N-terminal NJ56_RS09510 PF02896 PEP-utilising enzyme, TIM barrel domain NJ56_RS09510 PF00391 PEP-utilising enzyme, mobile domain NJ56_RS09515 PF01790 Prolipoprotein diacylglyceryl transferase NJ56_RS09520 PF00303 Thymidylate synthase NJ56_RS09530 PF07963 Prokaryotic N-terminal methylation motif NJ56_RS09530 PF00114 Pilin (bacterial filament) NJ56_RS09545 PF12528 Type II secretion prepilin peptidase dependent protein C NJ56_RS09545 PF07963 Prokaryotic N-terminal methylation motif NJ56_RS09550 PF17946 RecC C-terminal domain NJ56_RS09555 PF00675 Insulinase (Peptidase family M16) NJ56_RS09555 PF05193 Peptidase M16 inactive domain NJ56_RS09555 PF16187 Middle or third domain of peptidase_M16 NJ56_RS09560 PF12705 PD-(D/E)XK nuclease superfamily NJ56_RS09560 PF00580 UvrD/REP helicase N-terminal domain NJ56_RS09560 PF13361 UvrD-like helicase C-terminal domain NJ56_RS09565 PF13538 UvrD-like helicase C-terminal domain NJ56_RS09570 PF00696 Amino acid kinase family NJ56_RS09570 PF00583 Acetyltransferase (GNAT) family NJ56_RS09575 PF11741 AMIN domain NJ56_RS09575 PF01520 N-acetylmuramoyl-L-alanine amidase NJ56_RS09595 PF03562 MltA specific insert domain NJ56_RS09595 PF06725 3D domain NJ56_RS09600 PF00899 ThiF family NJ56_RS09605 PF02657 Fe-S metabolism associated domain NJ56_RS09610 PF00266 Aminotransferase class-V NJ56_RS09615 PF06004 Bacterial protein of unknown function (DUF903) NJ56_RS09620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NJ56_RS09620 PF03466 LysR substrate binding domain NJ56_RS09625 PF04241 Protein of unknown function (DUF423) NJ56_RS09630 PF01728 FtsJ-like methyltransferase NJ56_RS09630 PF18125 RlmM ferredoxin-like domain NJ56_RS09635 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NJ56_RS09635 PF01367 5'-3' exonuclease, C-terminal SAM fold NJ56_RS09640 PF03641 Possible lysine decarboxylase NJ56_RS09640 PF11892 Domain of unknown function (DUF3412) NJ56_RS09640 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases NJ56_RS09645 PF14489 QueF-like protein NJ56_RS09645 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term NJ56_RS09650 PF07348 Syd protein (SUKH-2) NJ56_RS09655 PF04287 tRNA pseudouridine synthase C NJ56_RS09660 PF00849 RNA pseudouridylate synthase NJ56_RS09665 PF00258 Flavodoxin NJ56_RS09670 PF11944 Protein of unknown function (DUF3461) NJ56_RS09675 PF00132 Bacterial transferase hexapeptide (six repeats) NJ56_RS09675 PF14602 Hexapeptide repeat of succinyl-transferase NJ56_RS09675 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal NJ56_RS09680 PF01842 ACT domain NJ56_RS09680 PF01966 HD domain NJ56_RS09680 PF01909 Nucleotidyltransferase domain NJ56_RS09680 PF08335 GlnD PII-uridylyltransferase NJ56_RS09685 PF00557 Metallopeptidase family M24 NJ56_RS09690 PF00318 Ribosomal protein S2 NJ56_RS09695 PF00889 Elongation factor TS NJ56_RS09700 PF00696 Amino acid kinase family NJ56_RS09705 PF01765 Ribosome recycling factor NJ56_RS09710 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain NJ56_RS09710 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase NJ56_RS09710 PF13288 DXP reductoisomerase C-terminal domain NJ56_RS09715 PF01255 Putative undecaprenyl diphosphate synthase NJ56_RS09725 PF17820 PDZ domain NJ56_RS09725 PF02163 Peptidase family M50 NJ56_RS09730 PF07244 Surface antigen variable number repeat NJ56_RS09730 PF01103 Surface antigen NJ56_RS09735 PF03938 Outer membrane protein (OmpH-like) NJ56_RS09740 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD NJ56_RS09740 PF00132 Bacterial transferase hexapeptide (six repeats) NJ56_RS09745 PF07977 FabA-like domain NJ56_RS09750 PF00132 Bacterial transferase hexapeptide (six repeats) NJ56_RS09750 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 NJ56_RS09755 PF02684 Lipid-A-disaccharide synthetase NJ56_RS09760 PF01351 Ribonuclease HII NJ56_RS09765 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NJ56_RS09765 PF02811 PHP domain NJ56_RS09765 PF14579 Helix-hairpin-helix motif NJ56_RS09765 PF07733 Bacterial DNA polymerase III alpha NTPase domain NJ56_RS09765 PF01336 OB-fold nucleic acid binding domain NJ56_RS09770 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit NJ56_RS09790 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NJ56_RS09795 PF09179 TilS substrate binding domain NJ56_RS09795 PF11734 TilS substrate C-terminal domain NJ56_RS09795 PF01171 PP-loop family NJ56_RS09800 PF00034 Cytochrome c NJ56_RS09805 PF07073 Modulator of Rho-dependent transcription termination (ROF) NJ56_RS09810 PF06786 Uncharacterised protein family (UPF0253) NJ56_RS09815 PF07152 YaeQ protein NJ56_RS09820 PF00472 RF-1 domain NJ56_RS09825 PF04170 NlpE N-terminal domain NJ56_RS09825 PF17185 NlpE C-terminal OB domain NJ56_RS09830 PF04073 Aminoacyl-tRNA editing domain NJ56_RS09830 PF03129 Anticodon binding domain NJ56_RS09830 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NJ56_RS09835 PF01980 tRNA-methyltransferase O NJ56_RS09835 PF18389 TrmO C-terminal domain NJ56_RS09840 PF16358 RcsF lipoprotein NJ56_RS09845 PF03180 NLPA lipoprotein NJ56_RS09850 PF00528 Binding-protein-dependent transport system inner membrane component NJ56_RS09855 PF09383 NIL domain NJ56_RS09855 PF00005 ABC transporter NJ56_RS09885 PF10043 Predicted periplasmic lipoprotein (DUF2279) NJ56_RS09890 PF13091 PLD-like domain NJ56_RS09895 PF00583 Acetyltransferase (GNAT) family NJ56_RS09895 PF13607 Succinyl-CoA ligase like flavodoxin domain NJ56_RS09895 PF13380 CoA binding domain NJ56_RS09900 PF03942 DTW domain NJ56_RS09905 PF00085 Thioredoxin NJ56_RS09910 PF00588 SpoU rRNA Methylase family NJ56_RS09910 PF08032 RNA 2'-O ribose methyltransferase substrate binding NJ56_RS09915 PF07690 Major Facilitator Superfamily NJ56_RS09920 PF00529 HlyD membrane-fusion protein of T1SS NJ56_RS09920 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NJ56_RS09930 PF01047 MarR family NJ56_RS09935 PF07690 Major Facilitator Superfamily NJ56_RS09945 PF04069 Substrate binding domain of ABC-type glycine betaine transport system NJ56_RS09950 PF00528 Binding-protein-dependent transport system inner membrane component NJ56_RS09955 PF00005 ABC transporter NJ56_RS09955 PF00571 CBS domain NJ56_RS09960 PF00268 Ribonucleotide reductase, small chain NJ56_RS09965 PF08343 Ribonucleotide reductase N-terminal NJ56_RS09965 PF02867 Ribonucleotide reductase, barrel domain NJ56_RS09965 PF00317 Ribonucleotide reductase, all-alpha domain NJ56_RS09970 PF07972 NrdI Flavodoxin like NJ56_RS09985 PF09400 Protein of unknown function (DUF2002) NJ56_RS09990 PF06711 Protein of unknown function (DUF1198) NJ56_RS10000 PF00313 'Cold-shock' DNA-binding domain NJ56_RS10005 PF06039 Malate:quinone oxidoreductase (Mqo) NJ56_RS10010 PF01070 FMN-dependent dehydrogenase NJ56_RS10015 PF02652 L-lactate permease NJ56_RS10020 PF03466 LysR substrate binding domain NJ56_RS10020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NJ56_RS10025 PF00561 alpha/beta hydrolase fold NJ56_RS10035 PF00005 ABC transporter NJ56_RS10040 PF02653 Branched-chain amino acid transport system / permease component NJ56_RS10050 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NJ56_RS10050 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NJ56_RS10055 PF01380 SIS domain NJ56_RS10055 PF00571 CBS domain NJ56_RS10080 PF14431 YwqJ-like deaminase NJ56_RS10080 PF18807 Tripartite Tc toxins repeat NJ56_RS10085 PF12256 Insecticide toxin TcdB middle/N-terminal region NJ56_RS10085 PF12255 Insecticide toxin TcdB middle/C-terminal region NJ56_RS10085 PF03534 Salmonella virulence plasmid 65kDa B protein NJ56_RS10095 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain NJ56_RS10095 PF18413 Neuraminidase-like domain NJ56_RS10095 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain NJ56_RS10095 PF18413 Neuraminidase-like domain NJ56_RS10105 PF01527 Transposase NJ56_RS10125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NJ56_RS10125 PF03466 LysR substrate binding domain NJ56_RS10150 PF13954 PapC N-terminal domain NJ56_RS10150 PF00577 Outer membrane usher protein NJ56_RS10150 PF13953 PapC C-terminal domain NJ56_RS10155 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain NJ56_RS10155 PF02753 Pili assembly chaperone PapD, C-terminal domain NJ56_RS10210 PF17345 Family of unknown function (DUF5375) NJ56_RS10240 PF04606 Ogr/Delta-like zinc finger NJ56_RS10250 PF00589 Phage integrase family NJ56_RS10250 PF13356 Arm DNA-binding domain NJ56_RS10260 PF01668 SmpB protein NJ56_RS10265 PF03364 Polyketide cyclase / dehydrase and lipid transport NJ56_RS10270 PF03658 RnfH family Ubiquitin NJ56_RS10275 PF04355 SmpA / OmlA family NJ56_RS10280 PF02463 RecF/RecN/SMC N terminal domain NJ56_RS10285 PF01513 ATP-NAD kinase NJ56_RS10295 PF01025 GrpE NJ56_RS10300 PF03167 Uracil DNA glycosylase superfamily NJ56_RS10305 PF01228 Glycine radical NJ56_RS10315 PF12796 Ankyrin repeats (3 copies) NJ56_RS10320 PF00270 DEAD/DEAH box helicase NJ56_RS10320 PF00271 Helicase conserved C-terminal domain NJ56_RS10325 PF05175 Methyltransferase small domain NJ56_RS10330 PF00890 FAD binding domain NJ56_RS10330 PF02910 Fumarate reductase flavoprotein C-term NJ56_RS10335 PF08281 Sigma-70, region 4 NJ56_RS10335 PF04542 Sigma-70 region 2 NJ56_RS10340 PF03873 Anti sigma-E protein RseA, C-terminal domain NJ56_RS10340 PF03872 Anti sigma-E protein RseA, N-terminal domain NJ56_RS10345 PF03888 MucB/RseB N-terminal domain NJ56_RS10345 PF17188 MucB/RseB C-terminal domain NJ56_RS10355 PF06421 GTP-binding protein LepA C-terminus NJ56_RS10355 PF03144 Elongation factor Tu domain 2 NJ56_RS10355 PF00009 Elongation factor Tu GTP binding domain NJ56_RS10355 PF00679 Elongation factor G C-terminus NJ56_RS10360 PF10502 Signal peptidase, peptidase S26 NJ56_RS10365 PF14622 Ribonuclease-III-like NJ56_RS10365 PF00035 Double-stranded RNA binding motif NJ56_RS10370 PF01926 50S ribosome-binding GTPase NJ56_RS10370 PF07650 KH domain NJ56_RS10375 PF11967 Recombination protein O N terminal NJ56_RS10375 PF02565 Recombination protein O C terminal NJ56_RS10380 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ NJ56_RS10385 PF01648 4'-phosphopantetheinyl transferase superfamily NJ56_RS10390 PF12838 4Fe-4S dicluster domain NJ56_RS10395 PF01380 SIS domain NJ56_RS10395 PF01418 Helix-turn-helix domain, rpiR family NJ56_RS10400 PF01380 SIS domain NJ56_RS10405 PF00367 phosphotransferase system, EIIB NJ56_RS10405 PF02378 Phosphotransferase system, EIIC NJ56_RS10415 PF14437 MafB19-like deaminase NJ56_RS10420 PF01464 Transglycosylase SLT domain NJ56_RS10420 PF00497 Bacterial extracellular solute-binding proteins, family 3 NJ56_RS10425 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal NJ56_RS10425 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain NJ56_RS10425 PF02769 AIR synthase related protein, C-terminal domain NJ56_RS10440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NJ56_RS10440 PF00512 His Kinase A (phospho-acceptor) domain NJ56_RS10445 PF13942 YfhG lipoprotein NJ56_RS10450 PF00158 Sigma-54 interaction domain NJ56_RS10450 PF00072 Response regulator receiver domain NJ56_RS10455 PF00795 Carbon-nitrogen hydrolase NJ56_RS10455 PF02540 NAD synthase NJ56_RS10460 PF00543 Nitrogen regulatory protein P-II NJ56_RS10465 PF10797 Protein of unknown function NJ56_RS10470 PF10941 Protein of unknown function DUF2620 NJ56_RS10475 PF02126 Phosphotriesterase family NJ56_RS10480 PF01168 Alanine racemase, N-terminal domain NJ56_RS10490 PF14502 Helix-turn-helix domain NJ56_RS10490 PF14503 YhfZ C-terminal domain NJ56_RS10495 PF00042 Globin NJ56_RS10495 PF00970 Oxidoreductase FAD-binding domain NJ56_RS10495 PF00175 Oxidoreductase NAD-binding domain NJ56_RS10500 PF00464 Serine hydroxymethyltransferase NJ56_RS10505 PF12832 MFS_1 like family NJ56_RS10510 PF00874 PRD domain NJ56_RS10515 PF06226 Protein of unknown function (DUF1007) NJ56_RS10520 PF03824 High-affinity nickel-transport protein NJ56_RS10525 PF00459 Inositol monophosphatase family NJ56_RS10530 PF00588 SpoU rRNA Methylase family NJ56_RS10535 PF02082 Transcriptional regulator NJ56_RS10540 PF00266 Aminotransferase class-V NJ56_RS10545 PF01592 NifU-like N terminal domain NJ56_RS10550 PF01521 Iron-sulphur cluster biosynthesis NJ56_RS10555 PF07743 HSCB C-terminal oligomerisation domain NJ56_RS10555 PF00226 DnaJ domain NJ56_RS10560 PF00012 Hsp70 protein NJ56_RS10565 PF00111 2Fe-2S iron-sulfur cluster binding domain NJ56_RS10570 PF04384 Iron-sulphur cluster assembly NJ56_RS10575 PF00883 Cytosol aminopeptidase family, catalytic domain NJ56_RS10575 PF12404 Peptidase NJ56_RS10580 PF14581 SseB protein C-terminal domain NJ56_RS10580 PF07179 SseB protein N-terminal domain NJ56_RS10585 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain NJ56_RS10585 PF01835 MG2 domain NJ56_RS10585 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain NJ56_RS10585 PF17962 Bacterial macroglobulin domain 6 NJ56_RS10585 PF11974 Bacterial alpha-2-macroglobulin MG3 domain NJ56_RS10585 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain NJ56_RS10585 PF00207 Alpha-2-macroglobulin family NJ56_RS10585 PF07703 Alpha-2-macroglobulin bait region domain NJ56_RS10585 PF07678 A-macroglobulin TED domain NJ56_RS10590 PF06832 Penicillin-Binding Protein C-terminus Family NJ56_RS10590 PF00905 Penicillin binding protein transpeptidase domain NJ56_RS10590 PF00912 Transglycosylase NJ56_RS10600 PF00334 Nucleoside diphosphate kinase NJ56_RS10605 PF04055 Radical SAM superfamily NJ56_RS10615 PF13464 Domain of unknown function (DUF4115) NJ56_RS10620 PF04551 GcpE protein NJ56_RS10625 PF13393 Histidyl-tRNA synthetase NJ56_RS10625 PF03129 Anticodon binding domain NJ56_RS10630 PF09976 Tetratricopeptide repeat-like domain NJ56_RS10635 PF13360 PQQ-like domain NJ56_RS10640 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal NJ56_RS10640 PF01926 50S ribosome-binding GTPase NJ56_RS10645 PF07191 zinc-ribbons NJ56_RS10650 PF13742 OB-fold nucleic acid binding domain NJ56_RS10650 PF02601 Exonuclease VII, large subunit NJ56_RS10655 PF00478 IMP dehydrogenase / GMP reductase domain NJ56_RS10655 PF00571 CBS domain NJ56_RS10660 PF00958 GMP synthase C terminal domain NJ56_RS10660 PF00117 Glutamine amidotransferase class-I NJ56_RS10660 PF02540 NAD synthase NJ56_RS10700 PF08543 Phosphomethylpyrimidine kinase NJ56_RS10715 PF00781 Diacylglycerol kinase catalytic domain NJ56_RS10720 PF16325 Peptidase family U32 C-terminal domain NJ56_RS10720 PF01136 Peptidase family U32 NJ56_RS10725 PF07411 Domain of unknown function (DUF1508) NJ56_RS10730 PF00486 Transcriptional regulatory protein, C terminal NJ56_RS10730 PF00072 Response regulator receiver domain NJ56_RS10735 PF00512 His Kinase A (phospho-acceptor) domain NJ56_RS10735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NJ56_RS10735 PF00672 HAMP domain NJ56_RS10740 PF07690 Major Facilitator Superfamily NJ56_RS10745 PF00873 AcrB/AcrD/AcrF family NJ56_RS10750 PF00873 AcrB/AcrD/AcrF family NJ56_RS10755 PF13533 Biotin-lipoyl like NJ56_RS10775 PF00577 Outer membrane usher protein NJ56_RS10775 PF13954 PapC N-terminal domain NJ56_RS10775 PF13953 PapC C-terminal domain NJ56_RS10780 PF02753 Pili assembly chaperone PapD, C-terminal domain NJ56_RS10780 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain NJ56_RS10790 PF00012 Hsp70 protein NJ56_RS10795 PF00571 CBS domain NJ56_RS10795 PF01769 Divalent cation transporter NJ56_RS10795 PF03448 MgtE intracellular N domain NJ56_RS10805 PF02541 Ppx/GppA phosphatase family NJ56_RS10810 PF13089 Polyphosphate kinase N-terminal domain NJ56_RS10810 PF13090 Polyphosphate kinase C-terminal domain 2 NJ56_RS10810 PF02503 Polyphosphate kinase middle domain NJ56_RS10810 PF17941 Polyphosphate kinase C-terminal domain 1 NJ56_RS10815 PF00528 Binding-protein-dependent transport system inner membrane component NJ56_RS10820 PF00528 Binding-protein-dependent transport system inner membrane component NJ56_RS10825 PF00005 ABC transporter NJ56_RS10830 PF13302 Acetyltransferase (GNAT) domain NJ56_RS10835 PF00551 Formyl transferase NJ56_RS10845 PF02769 AIR synthase related protein, C-terminal domain NJ56_RS10845 PF00586 AIR synthase related protein, N-terminal domain NJ56_RS10860 PF00860 Permease family NJ56_RS10865 PF00308 Bacterial dnaA protein NJ56_RS10870 PF03960 ArsC family NJ56_RS10875 PF01435 Peptidase family M48 NJ56_RS10875 PF07720 Tetratricopeptide repeat NJ56_RS10880 PF01594 AI-2E family transporter NJ56_RS10885 PF00578 AhpC/TSA family NJ56_RS10890 PF01842 ACT domain NJ56_RS10895 PF00701 Dihydrodipicolinate synthetase family NJ56_RS10900 PF06804 NlpB/DapX lipoprotein NJ56_RS10905 PF01259 SAICAR synthetase NJ56_RS10910 PF04284 Protein of unknown function (DUF441) NJ56_RS10915 PF08351 Domain of unknown function (DUF1726) NJ56_RS10915 PF05127 Helicase NJ56_RS10915 PF17176 tRNA-binding domain NJ56_RS10915 PF13718 GNAT acetyltransferase 2 NJ56_RS10920 PF02230 Phospholipase/Carboxylesterase NJ56_RS10925 PF13980 Uncharacterised protein family (UPF0370) NJ56_RS10930 PF02557 D-alanyl-D-alanine carboxypeptidase NJ56_RS10935 PF01546 Peptidase family M20/M25/M40 NJ56_RS10935 PF07687 Peptidase dimerisation domain NJ56_RS10940 PF03960 ArsC family NJ56_RS10945 PF01817 Chorismate mutase type II NJ56_RS10955 PF00873 AcrB/AcrD/AcrF family NJ56_RS10965 PF00072 Response regulator receiver domain NJ56_RS10965 PF00196 Bacterial regulatory proteins, luxR family NJ56_RS10975 PF13187 4Fe-4S dicluster domain NJ56_RS10975 PF12800 4Fe-4S binding domain NJ56_RS10975 PF00037 4Fe-4S binding domain NJ56_RS10980 PF03927 NapD protein NJ56_RS10985 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NJ56_RS10985 PF01568 Molydopterin dinucleotide binding domain NJ56_RS10985 PF10518 TAT (twin-arginine translocation) pathway signal sequence NJ56_RS10985 PF00384 Molybdopterin oxidoreductase NJ56_RS10990 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) NJ56_RS10995 PF03264 NapC/NirT cytochrome c family, N-terminal region NJ56_RS11000 PF00293 NUDIX domain NJ56_RS11005 PF01515 Phosphate acetyl/butaryl transferase NJ56_RS11005 PF03949 Malic enzyme, NAD binding domain NJ56_RS11005 PF00390 Malic enzyme, N-terminal domain NJ56_RS11010 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 NJ56_RS11015 PF01218 Coproporphyrinogen III oxidase NJ56_RS11020 PF00583 Acetyltransferase (GNAT) family NJ56_RS11075 PF04076 Bacterial OB fold (BOF) protein NJ56_RS11080 PF06572 Protein of unknown function (DUF1131) NJ56_RS11085 PF04261 Dyp-type peroxidase family NJ56_RS11090 PF00701 Dihydrodipicolinate synthetase family NJ56_RS11095 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase NJ56_RS11100 PF00480 ROK family NJ56_RS11105 PF04074 YhcH/YjgK/YiaL NJ56_RS11110 PF01418 Helix-turn-helix domain, rpiR family NJ56_RS11110 PF01380 SIS domain NJ56_RS11115 PF07690 Major Facilitator Superfamily NJ56_RS11125 PF00528 Binding-protein-dependent transport system inner membrane component NJ56_RS11130 PF00528 Binding-protein-dependent transport system inner membrane component NJ56_RS11135 PF00005 ABC transporter NJ56_RS11140 PF00291 Pyridoxal-phosphate dependent enzyme NJ56_RS11145 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NJ56_RS11150 PF05524 PEP-utilising enzyme, N-terminal NJ56_RS11150 PF02896 PEP-utilising enzyme, TIM barrel domain NJ56_RS11150 PF00391 PEP-utilising enzyme, mobile domain NJ56_RS11155 PF00381 PTS HPr component phosphorylation site NJ56_RS11160 PF00291 Pyridoxal-phosphate dependent enzyme NJ56_RS11170 PF04354 ZipA, C-terminal FtsZ-binding domain NJ56_RS11175 PF03119 NAD-dependent DNA ligase C4 zinc finger domain NJ56_RS11175 PF03120 NAD-dependent DNA ligase OB-fold domain NJ56_RS11175 PF01653 NAD-dependent DNA ligase adenylation domain NJ56_RS11175 PF12826 Helix-hairpin-helix motif NJ56_RS11175 PF00533 BRCA1 C Terminus (BRCT) domain NJ56_RS11180 PF12843 Putative quorum-sensing-regulated virulence factor NJ56_RS11210 PF00749 tRNA synthetases class I (E and Q), catalytic domain NJ56_RS11245 PF01773 Na+ dependent nucleoside transporter N-terminus NJ56_RS11245 PF07670 Nucleoside recognition NJ56_RS11245 PF07662 Na+ dependent nucleoside transporter C-terminus NJ56_RS11250 PF01566 Natural resistance-associated macrophage protein NJ56_RS11260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NJ56_RS11260 PF03466 LysR substrate binding domain NJ56_RS11270 PF02685 Glucokinase NJ56_RS11275 PF07690 Major Facilitator Superfamily NJ56_RS11280 PF04397 LytTr DNA-binding domain NJ56_RS11280 PF00072 Response regulator receiver domain NJ56_RS11285 PF07694 5TMR of 5TMR-LYT NJ56_RS11285 PF06580 Histidine kinase NJ56_RS11285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NJ56_RS11290 PF07350 Protein of unknown function (DUF1479) NJ56_RS11295 PF00155 Aminotransferase class I and II NJ56_RS11300 PF01292 Prokaryotic cytochrome b561 NJ56_RS11315 PF13406 Transglycosylase SLT domain NJ56_RS11320 PF03831 PhnA domain NJ56_RS11320 PF08274 PhnA Zinc-Ribbon NJ56_RS11335 PF00005 ABC transporter NJ56_RS11340 PF03379 CcmB protein NJ56_RS11345 PF01578 Cytochrome C assembly protein NJ56_RS11350 PF04995 Heme exporter protein D (CcmD) NJ56_RS11355 PF03100 CcmE NJ56_RS11360 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal NJ56_RS11360 PF01578 Cytochrome C assembly protein NJ56_RS11365 PF08534 Redoxin NJ56_RS11370 PF03918 Cytochrome C biogenesis protein NJ56_RS11375 PF03918 Cytochrome C biogenesis protein NJ56_RS11380 PF04333 MlaA lipoprotein NJ56_RS11385 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) NJ56_RS11390 PF04175 Protein of unknown function (DUF406) NJ56_RS11395 PF00108 Thiolase, N-terminal domain NJ56_RS11395 PF02803 Thiolase, C-terminal domain NJ56_RS11400 PF00378 Enoyl-CoA hydratase/isomerase NJ56_RS11400 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NJ56_RS11400 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NJ56_RS11410 PF00300 Histidine phosphatase superfamily (branch 1) NJ56_RS11415 PF01713 Smr domain NJ56_RS11420 PF05175 Methyltransferase small domain NJ56_RS11425 PF01264 Chorismate synthase NJ56_RS11430 PF03411 Penicillin-insensitive murein endopeptidase NJ56_RS11435 PF01925 Sulfite exporter TauE/SafE NJ56_RS11440 PF04315 Elongation factor P hydroxylase NJ56_RS11445 PF08891 YfcL protein NJ56_RS11450 PF01266 FAD dependent oxidoreductase NJ56_RS11450 PF05430 S-adenosyl-L-methionine-dependent methyltransferase NJ56_RS11455 PF02801 Beta-ketoacyl synthase, C-terminal domain NJ56_RS11455 PF00109 Beta-ketoacyl synthase, N-terminal domain NJ56_RS11485 PF00578 AhpC/TSA family NJ56_RS11490 PF00155 Aminotransferase class I and II NJ56_RS11510 PF11890 Domain of unknown function (DUF3410) NJ56_RS11510 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NJ56_RS11510 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NJ56_RS11515 PF02774 Semialdehyde dehydrogenase, dimerisation domain NJ56_RS11515 PF01118 Semialdehyde dehydrogenase, NAD binding domain NJ56_RS11520 PF01416 tRNA pseudouridine synthase NJ56_RS11525 PF09335 SNARE associated Golgi protein NJ56_RS11530 PF17848 Acetyl-coA carboxylase zinc finger domain NJ56_RS11530 PF01039 Carboxyl transferase domain NJ56_RS11535 PF02875 Mur ligase family, glutamate ligase domain NJ56_RS11535 PF08245 Mur ligase middle domain NJ56_RS11540 PF05036 Sporulation related domain NJ56_RS11545 PF02674 Colicin V production protein NJ56_RS11550 PF00156 Phosphoribosyl transferase domain NJ56_RS11555 PF02441 Flavoprotein NJ56_RS11560 PF00497 Bacterial extracellular solute-binding proteins, family 3 NJ56_RS11565 PF00528 Binding-protein-dependent transport system inner membrane component NJ56_RS11570 PF00528 Binding-protein-dependent transport system inner membrane component NJ56_RS11575 PF00005 ABC transporter NJ56_RS11580 PF08338 Domain of unknown function (DUF1731) NJ56_RS11580 PF01370 NAD dependent epimerase/dehydratase family NJ56_RS11585 PF00043 Glutathione S-transferase, C-terminal domain NJ56_RS11585 PF02798 Glutathione S-transferase, N-terminal domain NJ56_RS11595 PF12850 Calcineurin-like phosphoesterase superfamily domain NJ56_RS11600 PF00293 NUDIX domain NJ56_RS11605 PF03611 PTS system sugar-specific permease component NJ56_RS11615 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NJ56_RS11620 PF00356 Bacterial regulatory proteins, lacI family NJ56_RS11620 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NJ56_RS11625 PF07085 DRTGG domain NJ56_RS11625 PF01515 Phosphate acetyl/butaryl transferase NJ56_RS11630 PF00871 Acetokinase family NJ56_RS11635 PF04217 Protein of unknown function, DUF412 NJ56_RS11640 PF03887 YfbU domain NJ56_RS11650 PF02080 TrkA-C domain NJ56_RS11650 PF03600 Citrate transporter NJ56_RS11660 PF00155 Aminotransferase class I and II NJ56_RS11670 PF03466 LysR substrate binding domain NJ56_RS11670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NJ56_RS11675 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 NJ56_RS11680 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit NJ56_RS11685 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NJ56_RS11685 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit NJ56_RS11695 PF10531 SLBB domain NJ56_RS11695 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region NJ56_RS11695 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit NJ56_RS11700 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NJ56_RS11700 PF00384 Molybdopterin oxidoreductase NJ56_RS11700 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NJ56_RS11700 PF01568 Molydopterin dinucleotide binding domain NJ56_RS11705 PF00146 NADH dehydrogenase NJ56_RS11710 PF12838 4Fe-4S dicluster domain NJ56_RS11715 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 NJ56_RS11720 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NJ56_RS11725 PF00361 Proton-conducting membrane transporter NJ56_RS11725 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NJ56_RS11730 PF00361 Proton-conducting membrane transporter NJ56_RS11735 PF00361 Proton-conducting membrane transporter NJ56_RS11740 PF06496 Protein of unknown function (DUF1097) NJ56_RS11745 PF05957 Bacterial protein of unknown function (DUF883) NJ56_RS11750 PF00425 chorismate binding enzyme NJ56_RS11755 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NJ56_RS11755 PF16582 Middle domain of thiamine pyrophosphate NJ56_RS11755 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NJ56_RS11760 PF12697 Alpha/beta hydrolase family NJ56_RS11765 PF00378 Enoyl-CoA hydratase/isomerase NJ56_RS11770 PF13378 Enolase C-terminal domain-like NJ56_RS11775 PF13193 AMP-binding enzyme C-terminal domain NJ56_RS11775 PF00501 AMP-binding enzyme NJ56_RS11780 PF06628 Catalase-related immune-responsive NJ56_RS11780 PF00199 Catalase NJ56_RS11785 PF07437 YfaZ precursor NJ56_RS11790 PF03222 Tryptophan/tyrosine permease family NJ56_RS11800 PF00535 Glycosyl transferase family 2 NJ56_RS11805 PF04138 GtrA-like protein NJ56_RS11810 PF00994 Probable molybdopterin binding domain NJ56_RS11815 PF03974 Ecotin NJ56_RS11825 PF00111 2Fe-2S iron-sulfur cluster binding domain NJ56_RS11830 PF00268 Ribonucleotide reductase, small chain NJ56_RS11835 PF03477 ATP cone domain NJ56_RS11835 PF02867 Ribonucleotide reductase, barrel domain NJ56_RS11835 PF00317 Ribonucleotide reductase, all-alpha domain NJ56_RS11845 PF03989 DNA gyrase C-terminal domain, beta-propeller NJ56_RS11845 PF00521 DNA gyrase/topoisomerase IV, subunit A NJ56_RS11850 PF00512 His Kinase A (phospho-acceptor) domain NJ56_RS11850 PF00072 Response regulator receiver domain NJ56_RS11850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NJ56_RS11850 PF09456 RcsC Alpha-Beta-Loop (ABL) NJ56_RS11855 PF00072 Response regulator receiver domain NJ56_RS11855 PF00196 Bacterial regulatory proteins, luxR family NJ56_RS11860 PF01627 Hpt domain NJ56_RS11860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NJ56_RS11860 PF16359 RcsD-ABL domain NJ56_RS11865 PF07690 Major Facilitator Superfamily NJ56_RS11870 PF00267 Gram-negative porin NJ56_RS11885 PF13302 Acetyltransferase (GNAT) domain NJ56_RS11890 PF00144 Beta-lactamase NJ56_RS11895 PF12706 Beta-lactamase superfamily domain NJ56_RS11900 PF06183 DinI-like family NJ56_RS11940 PF10065 Uncharacterized conserved protein (DUF2303) NJ56_RS11960 PF00717 Peptidase S24-like NJ56_RS11960 PF01381 Helix-turn-helix NJ56_RS11985 PF03354 Phage Terminase NJ56_RS11990 PF05869 DNA N-6-adenine-methyltransferase (Dam) NJ56_RS12010 PF06147 Protein of unknown function (DUF968) NJ56_RS12020 PF01555 DNA methylase NJ56_RS12025 PF00561 alpha/beta hydrolase fold NJ56_RS12040 PF00182 Chitinase class I NJ56_RS12055 PF09669 Phage regulatory protein Rha (Phage_pRha) NJ56_RS12055 PF10549 ORF11CD3 domain NJ56_RS12070 PF03354 Phage Terminase NJ56_RS12115 PF04984 Phage tail sheath protein subtilisin-like domain NJ56_RS12115 PF17482 Phage tail sheath C-terminal domain NJ56_RS12160 PF04865 Baseplate J-like protein NJ56_RS12165 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) NJ56_RS12195 PF11893 Domain of unknown function (DUF3413) NJ56_RS12195 PF00884 Sulfatase NJ56_RS12200 PF07208 Protein of unknown function (DUF1414) NJ56_RS12205 PF04245 37-kD nucleoid-associated bacterial protein NJ56_RS12210 PF01386 Ribosomal L25p family NJ56_RS12215 PF00271 Helicase conserved C-terminal domain NJ56_RS12215 PF04851 Type III restriction enzyme, res subunit NJ56_RS12220 PF01479 S4 domain NJ56_RS12220 PF00849 RNA pseudouridylate synthase NJ56_RS12225 PF07690 Major Facilitator Superfamily NJ56_RS12230 PF13989 YejG-like protein NJ56_RS12235 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NJ56_RS12235 PF00005 ABC transporter NJ56_RS12240 PF12911 N-terminal TM domain of oligopeptide transport permease C NJ56_RS12240 PF00528 Binding-protein-dependent transport system inner membrane component NJ56_RS12245 PF00528 Binding-protein-dependent transport system inner membrane component NJ56_RS12250 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NJ56_RS12255 PF00563 EAL domain NJ56_RS12255 PF12792 CSS motif domain associated with EAL NJ56_RS12260 PF00877 NlpC/P60 family NJ56_RS12265 PF01569 PAP2 superfamily NJ56_RS12270 PF07683 Cobalamin synthesis protein cobW C-terminal domain NJ56_RS12270 PF02492 CobW/HypB/UreG, nucleotide-binding domain NJ56_RS12285 PF08125 Mannitol dehydrogenase C-terminal domain NJ56_RS12285 PF01232 Mannitol dehydrogenase Rossmann domain NJ56_RS12295 PF03786 D-mannonate dehydratase (UxuA) NJ56_RS12300 PF08207 Elongation factor P (EF-P) KOW-like domain NJ56_RS12300 PF09285 Elongation factor P, C-terminal NJ56_RS12300 PF01132 Elongation factor P (EF-P) OB domain NJ56_RS12305 PF03222 Tryptophan/tyrosine permease family NJ56_RS12310 PF03692 Putative zinc- or iron-chelating domain NJ56_RS12315 PF00384 Molybdopterin oxidoreductase NJ56_RS12315 PF18364 Molybdopterin oxidoreductase N-terminal domain NJ56_RS12315 PF01568 Molydopterin dinucleotide binding domain NJ56_RS12320 PF03264 NapC/NirT cytochrome c family, N-terminal region NJ56_RS12325 PF00293 NUDIX domain NJ56_RS12330 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NJ56_RS12330 PF00381 PTS HPr component phosphorylation site NJ56_RS12335 PF00294 pfkB family carbohydrate kinase NJ56_RS12340 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NJ56_RS12340 PF02378 Phosphotransferase system, EIIC NJ56_RS12345 PF01261 Xylose isomerase-like TIM barrel NJ56_RS12350 PF03601 Conserved hypothetical protein 698 NJ56_RS12365 PF03466 LysR substrate binding domain NJ56_RS12365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NJ56_RS12370 PF00324 Amino acid permease NJ56_RS12380 PF01032 FecCD transport family NJ56_RS12385 PF00005 ABC transporter NJ56_RS12390 PF00593 TonB dependent receptor NJ56_RS12390 PF07715 TonB-dependent Receptor Plug Domain NJ56_RS12400 PF13520 Amino acid permease NJ56_RS12405 PF00929 Exonuclease NJ56_RS12405 PF08411 Exonuclease C-terminal NJ56_RS12415 PF04632 Fusaric acid resistance protein family NJ56_RS12420 PF04363 Protein of unknown function (DUF496) NJ56_RS12435 PF01734 Patatin-like phospholipase NJ56_RS12490 PF18818 Metallopeptidase superfamily domain NJ56_RS12490 PF08401 Domain of unknown function (DUF1738) NJ56_RS12510 PF00437 Type II/IV secretion system protein NJ56_RS12515 PF03743 Bacterial conjugation TrbI-like protein NJ56_RS12520 PF03524 Conjugal transfer protein NJ56_RS12525 PF04335 VirB8 protein NJ56_RS12545 PF03135 CagE, TrbE, VirB family, component of type IV transporter system NJ56_RS12580 PF13693 Winged helix-turn-helix DNA-binding NJ56_RS12595 PF13356 Arm DNA-binding domain NJ56_RS12595 PF00589 Phage integrase family NJ56_RS12610 PF00005 ABC transporter NJ56_RS12610 PF08402 TOBE domain NJ56_RS12615 PF00528 Binding-protein-dependent transport system inner membrane component NJ56_RS12625 PF07690 Major Facilitator Superfamily NJ56_RS12630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NJ56_RS12630 PF07730 Histidine kinase NJ56_RS12630 PF05231 MASE1 NJ56_RS12635 PF00072 Response regulator receiver domain NJ56_RS12635 PF00196 Bacterial regulatory proteins, luxR family NJ56_RS12640 PF12431 Transcriptional regulator NJ56_RS12640 PF00072 Response regulator receiver domain NJ56_RS12645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NJ56_RS12645 PF00989 PAS fold NJ56_RS12645 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain NJ56_RS12645 PF17203 Single cache domain 3 NJ56_RS12650 PF08218 Citrate lyase ligase C-terminal domain NJ56_RS12655 PF06857 Malonate decarboxylase delta subunit (MdcD) NJ56_RS12660 PF03328 HpcH/HpaI aldolase/citrate lyase family NJ56_RS12665 PF04223 Citrate lyase, alpha subunit (CitF) NJ56_RS12670 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase NJ56_RS12675 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase NJ56_RS12680 PF00939 Sodium:sulfate symporter transmembrane region NJ56_RS12685 PF17837 4'-phosphopantetheinyl transferase N-terminal domain NJ56_RS12685 PF01648 4'-phosphopantetheinyl transferase superfamily NJ56_RS12700 PF06167 Glucose-regulated metallo-peptidase M90 NJ56_RS12710 PF14001 YdfZ protein NJ56_RS12720 PF10777 Inner membrane protein YlaC NJ56_RS12725 PF08659 KR domain NJ56_RS12725 PF00698 Acyl transferase domain NJ56_RS12725 PF00550 Phosphopantetheine attachment site NJ56_RS12725 PF02801 Beta-ketoacyl synthase, C-terminal domain NJ56_RS12725 PF14765 Polyketide synthase dehydratase NJ56_RS12725 PF00107 Zinc-binding dehydrogenase NJ56_RS12725 PF16197 Ketoacyl-synthetase C-terminal extension NJ56_RS12725 PF00109 Beta-ketoacyl synthase, N-terminal domain NJ56_RS12725 PF08240 Alcohol dehydrogenase GroES-like domain NJ56_RS12730 PF02929 Beta galactosidase small chain NJ56_RS12730 PF00703 Glycosyl hydrolases family 2 NJ56_RS12730 PF02836 Glycosyl hydrolases family 2, TIM barrel domain NJ56_RS12730 PF02837 Glycosyl hydrolases family 2, sugar binding domain NJ56_RS12730 PF16353 Domain of unknown function(DUF4981) NJ56_RS12735 PF00356 Bacterial regulatory proteins, lacI family NJ56_RS12745 PF00313 'Cold-shock' DNA-binding domain NJ56_RS12750 PF10781 Dextransucrase DSRB NJ56_RS12755 PF00672 HAMP domain NJ56_RS12755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NJ56_RS12755 PF02203 Tar ligand binding domain homologue NJ56_RS12760 PF02308 MgtC family NJ56_RS12770 PF00582 Universal stress protein family NJ56_RS12780 PF05247 Flagellar transcriptional activator (FlhD) NJ56_RS12785 PF05280 Flagellar transcriptional activator (FlhC) NJ56_RS12790 PF01618 MotA/TolQ/ExbB proton channel family NJ56_RS12795 PF13677 Membrane MotB of proton-channel complex MotA/MotB NJ56_RS12795 PF00691 OmpA family NJ56_RS12800 PF01584 CheW-like domain NJ56_RS12800 PF02895 Signal transducing histidine kinase, homodimeric domain NJ56_RS12800 PF01627 Hpt domain NJ56_RS12800 PF09078 CheY binding NJ56_RS12800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NJ56_RS12805 PF01584 CheW-like domain NJ56_RS12810 PF00672 HAMP domain NJ56_RS12810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NJ56_RS12810 PF02203 Tar ligand binding domain homologue NJ56_RS12815 PF00672 HAMP domain NJ56_RS12815 PF02203 Tar ligand binding domain homologue NJ56_RS12815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NJ56_RS12820 PF03705 CheR methyltransferase, all-alpha domain NJ56_RS12820 PF01739 CheR methyltransferase, SAM binding domain NJ56_RS12825 PF00072 Response regulator receiver domain NJ56_RS12825 PF01339 CheB methylesterase NJ56_RS12830 PF00072 Response regulator receiver domain NJ56_RS12835 PF04344 Chemotaxis phosphatase, CheZ NJ56_RS12865 PF00419 Fimbrial protein NJ56_RS12875 PF02753 Pili assembly chaperone PapD, C-terminal domain NJ56_RS12875 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain NJ56_RS12880 PF13953 PapC C-terminal domain NJ56_RS12880 PF00577 Outer membrane usher protein NJ56_RS12880 PF13954 PapC N-terminal domain NJ56_RS12890 PF00419 Fimbrial protein NJ56_RS12900 PF00196 Bacterial regulatory proteins, luxR family NJ56_RS12905 PF01483 Proprotein convertase P-domain NJ56_RS12905 PF00082 Subtilase family NJ56_RS12910 PF01312 FlhB HrpN YscU SpaS Family NJ56_RS12915 PF00771 FHIPEP family NJ56_RS12920 PF06366 Flagellar protein FlhE NJ56_RS12925 PF05130 FlgN protein NJ56_RS12930 PF04316 Anti-sigma-28 factor, FlgM NJ56_RS12935 PF13144 Chaperone for flagella basal body P-ring formation NJ56_RS12935 PF17656 FlgA N-terminal domain NJ56_RS12940 PF00460 Flagella basal body rod protein NJ56_RS12945 PF00460 Flagella basal body rod protein NJ56_RS12945 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NJ56_RS12950 PF13861 FlgD Tudor-like domain NJ56_RS12950 PF03963 Flagellar hook capping protein - N-terminal region NJ56_RS12950 PF13860 FlgD Ig-like domain NJ56_RS12955 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NJ56_RS12955 PF00460 Flagella basal body rod protein NJ56_RS12955 PF07559 Flagellar basal body protein FlaE NJ56_RS12960 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NJ56_RS12960 PF00460 Flagella basal body rod protein NJ56_RS12965 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NJ56_RS12965 PF00460 Flagella basal body rod protein NJ56_RS12970 PF02107 Flagellar L-ring protein NJ56_RS12975 PF02119 Flagellar P-ring protein NJ56_RS12980 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase NJ56_RS12980 PF10135 Rod binding protein NJ56_RS12985 PF00460 Flagella basal body rod protein NJ56_RS12985 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NJ56_RS12990 PF00669 Bacterial flagellin N-terminal helical region NJ56_RS12995 PF01311 Bacterial export proteins, family 1 NJ56_RS13000 PF01313 Bacterial export proteins, family 3 NJ56_RS13005 PF00813 FliP family NJ56_RS13010 PF04347 Flagellar biosynthesis protein, FliO NJ56_RS13015 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NJ56_RS13015 PF16973 Flagellar motor switch protein FliN N-terminal NJ56_RS13020 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NJ56_RS13020 PF02154 Flagellar motor switch protein FliM NJ56_RS13025 PF03748 Flagellar basal body-associated protein FliL NJ56_RS13035 PF02120 Flagellar hook-length control protein FliK NJ56_RS13040 PF02050 Flagellar FliJ protein NJ56_RS13045 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NJ56_RS13045 PF18269 T3SS EscN ATPase C-terminal domain NJ56_RS13050 PF02108 Flagellar assembly protein FliH NJ56_RS13055 PF14842 FliG N-terminal domain NJ56_RS13055 PF14841 FliG middle domain NJ56_RS13055 PF01706 FliG C-terminal domain NJ56_RS13060 PF08345 Flagellar M-ring protein C-terminal NJ56_RS13060 PF01514 Secretory protein of YscJ/FliF family NJ56_RS13065 PF02049 Flagellar hook-basal body complex protein FliE NJ56_RS13075 PF01223 DNA/RNA non-specific endonuclease NJ56_RS13080 PF07885 Ion channel NJ56_RS13080 PF02254 TrkA-N domain NJ56_RS13085 PF01966 HD domain NJ56_RS13090 PF12833 Helix-turn-helix domain NJ56_RS13095 PF05400 Flagellar protein FliT NJ56_RS13100 PF02561 Flagellar protein FliS NJ56_RS13105 PF07196 Flagellin hook IN motif NJ56_RS13105 PF07195 Flagellar hook-associated protein 2 C-terminus NJ56_RS13105 PF02465 Flagellar hook-associated protein 2 N-terminus NJ56_RS13110 PF00669 Bacterial flagellin N-terminal helical region NJ56_RS13110 PF00700 Bacterial flagellin C-terminal helical region NJ56_RS13110 PF08884 Flagellin D3 domain NJ56_RS13115 PF00700 Bacterial flagellin C-terminal helical region NJ56_RS13115 PF08884 Flagellin D3 domain NJ56_RS13115 PF00669 Bacterial flagellin N-terminal helical region NJ56_RS13120 PF00700 Bacterial flagellin C-terminal helical region NJ56_RS13120 PF08884 Flagellin D3 domain NJ56_RS13120 PF00669 Bacterial flagellin N-terminal helical region NJ56_RS13125 PF04545 Sigma-70, region 4 NJ56_RS13125 PF04539 Sigma-70 region 3 NJ56_RS13125 PF04542 Sigma-70 region 2 NJ56_RS13130 PF02899 Phage integrase, N-terminal SAM-like domain NJ56_RS13135 PF00291 Pyridoxal-phosphate dependent enzyme NJ56_RS13140 PF00497 Bacterial extracellular solute-binding proteins, family 3 NJ56_RS13145 PF00528 Binding-protein-dependent transport system inner membrane component NJ56_RS13150 PF00005 ABC transporter NJ56_RS13155 PF18327 Proline utilization A proline dehydrogenase N-terminal domain NJ56_RS13155 PF14850 DNA-binding domain of Proline dehydrogenase NJ56_RS13155 PF01619 Proline dehydrogenase NJ56_RS13155 PF00171 Aldehyde dehydrogenase family NJ56_RS13160 PF00474 Sodium:solute symporter family NJ56_RS13165 PF18500 CadC C-terminal domain 1 NJ56_RS13165 PF00486 Transcriptional regulatory protein, C terminal NJ56_RS13170 PF13520 Amino acid permease NJ56_RS13175 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain NJ56_RS13175 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain NJ56_RS13175 PF01276 Orn/Lys/Arg decarboxylase, major domain NJ56_RS13180 PF00324 Amino acid permease NJ56_RS13190 PF00589 Phage integrase family NJ56_RS13200 PF10769 Protein of unknown function (DUF2594) NJ56_RS13205 PF00196 Bacterial regulatory proteins, luxR family NJ56_RS13205 PF00072 Response regulator receiver domain NJ56_RS13210 PF08459 UvrC Helix-hairpin-helix N-terminal NJ56_RS13210 PF02151 UvrB/uvrC motif NJ56_RS13210 PF01541 GIY-YIG catalytic domain NJ56_RS13215 PF01066 CDP-alcohol phosphatidyltransferase NJ56_RS13235 PF04606 Ogr/Delta-like zinc finger NJ56_RS13275 PF02413 Caudovirales tail fibre assembly protein, lambda gpK NJ56_RS13280 PF07484 Phage Tail Collar Domain NJ56_RS13310 PF06114 IrrE N-terminal-like domain NJ56_RS13395 PF05840 Bacteriophage replication gene A protein (GPA) NJ56_RS13415 PF06892 Phage regulatory protein CII (CP76) NJ56_RS13425 PF16452 Bacteriophage CI repressor C-terminal domain NJ56_RS13425 PF07022 Bacteriophage CI repressor helix-turn-helix domain NJ56_RS13430 PF03120 NAD-dependent DNA ligase OB-fold domain NJ56_RS13430 PF01653 NAD-dependent DNA ligase adenylation domain NJ56_RS13430 PF00533 BRCA1 C Terminus (BRCT) domain NJ56_RS13430 PF03119 NAD-dependent DNA ligase C4 zinc finger domain NJ56_RS13430 PF12826 Helix-hairpin-helix motif NJ56_RS13435 PF00589 Phage integrase family NJ56_RS13435 PF02899 Phage integrase, N-terminal SAM-like domain NJ56_RS13490 PF02086 D12 class N6 adenine-specific DNA methyltransferase NJ56_RS13545 PF13276 HTH-like domain NJ56_RS13545 PF13333 Integrase core domain NJ56_RS13545 PF00665 Integrase core domain NJ56_RS13550 PF00672 HAMP domain NJ56_RS13550 PF02203 Tar ligand binding domain homologue NJ56_RS13550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NJ56_RS13560 PF00005 ABC transporter NJ56_RS13565 PF00528 Binding-protein-dependent transport system inner membrane component NJ56_RS13580 PF00034 Cytochrome c NJ56_RS13580 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NJ56_RS13595 PF13673 Acetyltransferase (GNAT) domain NJ56_RS13625 PF04960 Glutaminase NJ56_RS13630 PF13520 Amino acid permease NJ56_RS13635 PF00282 Pyridoxal-dependent decarboxylase conserved domain NJ56_RS13640 PF00849 RNA pseudouridylate synthase NJ56_RS13655 PF13520 Amino acid permease NJ56_RS13665 PF03553 Na+/H+ antiporter family NJ56_RS13670 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) NJ56_RS13680 PF00849 RNA pseudouridylate synthase NJ56_RS13680 PF01479 S4 domain NJ56_RS13690 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NJ56_RS13695 PF02378 Phosphotransferase system, EIIC NJ56_RS13700 PF00232 Glycosyl hydrolase family 1 NJ56_RS13705 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit NJ56_RS13710 PF12833 Helix-turn-helix domain NJ56_RS13710 PF07883 Cupin domain NJ56_RS13715 PF04794 YdjC-like protein NJ56_RS13740 PF00313 'Cold-shock' DNA-binding domain NJ56_RS13745 PF00313 'Cold-shock' DNA-binding domain NJ56_RS13750 PF00313 'Cold-shock' DNA-binding domain NJ56_RS13755 PF08241 Methyltransferase domain NJ56_RS13770 PF01820 D-ala D-ala ligase N-terminus NJ56_RS13770 PF07478 D-ala D-ala ligase C-terminus NJ56_RS13775 PF06411 HdeA/HdeB family NJ56_RS13785 PF03372 Endonuclease/Exonuclease/phosphatase family NJ56_RS13790 PF00360 Phytochrome region NJ56_RS13790 PF00990 Diguanylate cyclase, GGDEF domain NJ56_RS13790 PF00563 EAL domain NJ56_RS13790 PF01590 GAF domain NJ56_RS13800 PF00664 ABC transporter transmembrane region NJ56_RS13800 PF00005 ABC transporter NJ56_RS13805 PF13520 Amino acid permease NJ56_RS13810 PF12833 Helix-turn-helix domain NJ56_RS13815 PF10964 Protein of unknown function (DUF2766) NJ56_RS13820 PF13996 YobH-like protein NJ56_RS13825 PF13998 MgrB protein NJ56_RS13830 PF13974 YebO-like protein NJ56_RS13845 PF00324 Amino acid permease NJ56_RS13850 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP NJ56_RS13855 PF10736 Protein of unknown function (DUF2627) NJ56_RS13860 PF00313 'Cold-shock' DNA-binding domain NJ56_RS13865 PF02578 Multi-copper polyphenol oxidoreductase laccase NJ56_RS13870 PF00905 Penicillin binding protein transpeptidase domain NJ56_RS13870 PF03717 Penicillin-binding Protein dimerisation domain NJ56_RS13875 PF13847 Methyltransferase domain NJ56_RS13895 PF07690 Major Facilitator Superfamily NJ56_RS13900 PF00501 AMP-binding enzyme NJ56_RS13900 PF13193 AMP-binding enzyme C-terminal domain NJ56_RS13900 PF00550 Phosphopantetheine attachment site NJ56_RS13900 PF00668 Condensation domain NJ56_RS13905 PF05199 GMC oxidoreductase NJ56_RS13905 PF00732 GMC oxidoreductase NJ56_RS13915 PF02770 Acyl-CoA dehydrogenase, middle domain NJ56_RS13915 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NJ56_RS13915 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NJ56_RS13930 PF02441 Flavoprotein NJ56_RS13935 PF02659 Putative manganese efflux pump NJ56_RS13940 PF06173 Protein of unknown function (DUF986) NJ56_RS13945 PF03613 PTS system mannose/fructose/sorbose family IID component NJ56_RS13950 PF03609 PTS system sorbose-specific iic component NJ56_RS13955 PF03610 PTS system fructose IIA component NJ56_RS13955 PF03830 PTS system sorbose subfamily IIB component NJ56_RS13960 PF03471 Transporter associated domain NJ56_RS13960 PF03741 Integral membrane protein TerC family NJ56_RS13965 PF03313 Serine dehydratase alpha chain NJ56_RS13965 PF03315 Serine dehydratase beta chain NJ56_RS13970 PF00293 NUDIX domain NJ56_RS13975 PF04715 Anthranilate synthase component I, N terminal region NJ56_RS13975 PF00425 chorismate binding enzyme NJ56_RS13980 PF03701 Uncharacterised protein family (UPF0181) NJ56_RS13985 PF02222 ATP-grasp domain NJ56_RS13990 PF03880 DbpA RNA binding domain NJ56_RS13990 PF00271 Helicase conserved C-terminal domain NJ56_RS13990 PF00270 DEAD/DEAH box helicase NJ56_RS13995 PF07130 YebG protein NJ56_RS14000 PF04266 ASCH domain NJ56_RS14005 PF13995 YebF-like protein NJ56_RS14015 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain NJ56_RS14015 PF00326 Prolyl oligopeptidase family NJ56_RS14020 PF00929 Exonuclease NJ56_RS14025 PF00561 alpha/beta hydrolase fold NJ56_RS14030 PF06440 DNA polymerase III, theta subunit NJ56_RS14035 PF00210 Ferritin-like domain NJ56_RS14040 PF04234 CopC domain NJ56_RS14045 PF05425 Copper resistance protein D NJ56_RS14050 PF10709 Protein of unknown function (DUF2511) NJ56_RS14060 PF00144 Beta-lactamase NJ56_RS14080 PF10753 Toxin GhoT_OrtT NJ56_RS14085 PF03783 Curli production assembly/transport component CsgG NJ56_RS14095 PF05643 Putative bacterial lipoprotein (DUF799) NJ56_RS14110 PF07351 Protein of unknown function (DUF1480) NJ56_RS14115 PF01590 GAF domain NJ56_RS14115 PF00563 EAL domain NJ56_RS14115 PF00360 Phytochrome region NJ56_RS14115 PF00990 Diguanylate cyclase, GGDEF domain NJ56_RS14120 PF02470 MlaD protein NJ56_RS14125 PF04403 Paraquat-inducible protein A NJ56_RS14130 PF13185 GAF domain NJ56_RS14135 PF17516 ProQ C-terminal domain NJ56_RS14135 PF04352 ProQ/FINO family NJ56_RS14140 PF11818 C-terminal domain of tail specific protease (DUF3340) NJ56_RS14140 PF00595 PDZ domain NJ56_RS14140 PF03572 Peptidase family S41 NJ56_RS14140 PF17804 Tail specific protease N-terminal domain NJ56_RS14145 PF01435 Peptidase family M48 NJ56_RS14155 PF07690 Major Facilitator Superfamily NJ56_RS14160 PF09339 IclR helix-turn-helix domain NJ56_RS14160 PF01614 Bacterial transcriptional regulator NJ56_RS14165 PF01510 N-acetylmuramoyl-L-alanine amidase NJ56_RS14170 PF00375 Sodium:dicarboxylate symporter family NJ56_RS14175 PF04307 LexA-binding, inner membrane-associated putative hydrolase NJ56_RS14180 PF13419 Haloacid dehalogenase-like hydrolase NJ56_RS14185 PF14002 YniB-like protein NJ56_RS14190 PF03881 Fructosamine kinase NJ56_RS14195 PF00950 ABC 3 transport family NJ56_RS14200 PF00950 ABC 3 transport family NJ56_RS14205 PF00005 ABC transporter NJ56_RS14210 PF01297 Zinc-uptake complex component A periplasmic NJ56_RS14215 PF01464 Transglycosylase SLT domain NJ56_RS14220 PF01914 MarC family integral membrane protein NJ56_RS14255 PF02824 TGS domain NJ56_RS14255 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NJ56_RS14255 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NJ56_RS14255 PF03129 Anticodon binding domain NJ56_RS14260 PF05198 Translation initiation factor IF-3, N-terminal domain NJ56_RS14260 PF00707 Translation initiation factor IF-3, C-terminal domain NJ56_RS14265 PF01632 Ribosomal protein L35 NJ56_RS14270 PF00453 Ribosomal protein L20 NJ56_RS14275 PF01409 tRNA synthetases class II core domain (F) NJ56_RS14275 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain NJ56_RS14280 PF01588 Putative tRNA binding domain NJ56_RS14280 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain NJ56_RS14280 PF03147 Ferredoxin-fold anticodon binding domain NJ56_RS14280 PF03484 tRNA synthetase B5 domain NJ56_RS14280 PF03483 B3/4 domain NJ56_RS14285 PF00216 Bacterial DNA-binding protein NJ56_RS14290 PF05154 TM2 domain NJ56_RS14305 PF02661 Fic/DOC family NJ56_RS14325 PF00589 Phage integrase family NJ56_RS14325 PF02899 Phage integrase, N-terminal SAM-like domain NJ56_RS14330 PF01032 FecCD transport family NJ56_RS14335 PF00005 ABC transporter NJ56_RS14340 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NJ56_RS14345 PF00535 Glycosyl transferase family 2 NJ56_RS14350 PF02911 Formyl transferase, C-terminal domain NJ56_RS14350 PF01370 NAD dependent epimerase/dehydratase family NJ56_RS14350 PF00551 Formyl transferase NJ56_RS14355 PF01522 Polysaccharide deacetylase NJ56_RS14360 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase NJ56_RS14365 PF00892 EamA-like transporter family NJ56_RS14375 PF00877 NlpC/P60 family NJ56_RS14380 PF03099 Biotin/lipoate A/B protein ligase family NJ56_RS14380 PF10437 Bacterial lipoate protein ligase C-terminus NJ56_RS14385 PF02696 Uncharacterized ACR, YdiU/UPF0061 family NJ56_RS14390 PF00005 ABC transporter NJ56_RS14395 PF01032 FecCD transport family NJ56_RS14400 PF01497 Periplasmic binding protein NJ56_RS14405 PF05171 Haemin-degrading HemS.ChuX domain NJ56_RS14410 PF00593 TonB dependent receptor NJ56_RS14410 PF07715 TonB-dependent Receptor Plug Domain NJ56_RS14415 PF10636 Hemin uptake protein hemP NJ56_RS14420 PF00793 DAHP synthetase I family NJ56_RS14425 PF03618 Kinase/pyrophosphorylase NJ56_RS14430 PF02896 PEP-utilising enzyme, TIM barrel domain NJ56_RS14430 PF00391 PEP-utilising enzyme, mobile domain NJ56_RS14430 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NJ56_RS14440 PF01594 AI-2E family transporter NJ56_RS14445 PF13183 4Fe-4S dicluster domain NJ56_RS14445 PF01565 FAD binding domain NJ56_RS14445 PF02913 FAD linked oxidases, C-terminal domain NJ56_RS14450 PF03061 Thioesterase superfamily NJ56_RS14455 PF01521 Iron-sulphur cluster biosynthesis NJ56_RS14460 PF01458 Uncharacterized protein family (UPF0051) NJ56_RS14465 PF00005 ABC transporter NJ56_RS14470 PF01458 Uncharacterized protein family (UPF0051) NJ56_RS14475 PF00266 Aminotransferase class-V NJ56_RS14480 PF02657 Fe-S metabolism associated domain NJ56_RS14485 PF01476 LysM domain NJ56_RS14485 PF17969 L,D-transpeptidase C-terminal domain NJ56_RS14485 PF03734 L,D-transpeptidase catalytic domain NJ56_RS14490 PF04728 Lipoprotein leucine-zipper NJ56_RS14495 PF02887 Pyruvate kinase, alpha/beta domain NJ56_RS14495 PF00224 Pyruvate kinase, barrel domain NJ56_RS14515 PF01554 MatE NJ56_RS14520 PF00677 Lumazine binding domain NJ56_RS14530 PF07690 Major Facilitator Superfamily NJ56_RS14535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NJ56_RS14535 PF03466 LysR substrate binding domain NJ56_RS14540 PF00356 Bacterial regulatory proteins, lacI family NJ56_RS14550 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NJ56_RS14550 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NJ56_RS14555 PF00877 NlpC/P60 family NJ56_RS14560 PF00462 Glutaredoxin NJ56_RS14565 PF00929 Exonuclease NJ56_RS14570 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NJ56_RS14575 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NJ56_RS14580 PF00440 Bacterial regulatory proteins, tetR family NJ56_RS14580 PF16925 Tetracyclin repressor-like, C-terminal domain NJ56_RS14585 PF00884 Sulfatase NJ56_RS14585 PF08019 Phosphoethanolamine transferase EptA/EptB NJ56_RS14590 PF06945 Protein of unknown function (DUF1289) NJ56_RS14595 PF00248 Aldo/keto reductase family NJ56_RS14605 PF01047 MarR family NJ56_RS14610 PF05433 Glycine zipper 2TM domain NJ56_RS14615 PF03702 Anhydro-N-acetylmuramic acid kinase NJ56_RS14620 PF01243 Pyridoxamine 5'-phosphate oxidase NJ56_RS14620 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region NJ56_RS14625 PF01479 S4 domain NJ56_RS14625 PF00579 tRNA synthetases class I (W and Y) NJ56_RS14630 PF08543 Phosphomethylpyrimidine kinase NJ56_RS14635 PF00043 Glutathione S-transferase, C-terminal domain NJ56_RS14635 PF02798 Glutathione S-transferase, N-terminal domain NJ56_RS14640 PF11656 YjbD family (DUF3811) NJ56_RS14650 PF04893 Yip1 domain NJ56_RS14660 PF00226 DnaJ domain NJ56_RS14660 PF01556 DnaJ C terminal domain NJ56_RS14670 PF00854 POT family NJ56_RS14680 PF00005 ABC transporter NJ56_RS14685 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NJ56_RS14685 PF00005 ABC transporter NJ56_RS14690 PF00528 Binding-protein-dependent transport system inner membrane component NJ56_RS14690 PF12911 N-terminal TM domain of oligopeptide transport permease C NJ56_RS14695 PF00528 Binding-protein-dependent transport system inner membrane component NJ56_RS14700 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NJ56_RS14710 PF02917 Pertussis toxin, subunit 1 NJ56_RS14720 PF02954 Bacterial regulatory protein, Fis family NJ56_RS14720 PF00158 Sigma-54 interaction domain NJ56_RS14725 PF04012 PspA/IM30 family NJ56_RS14730 PF06667 Phage shock protein B NJ56_RS14735 PF04024 PspC domain NJ56_RS14740 PF09584 Phage shock protein PspD (Phageshock_PspD) NJ56_RS14745 PF04317 YcjX-like family, DUF463 NJ56_RS14750 PF05128 Domain of unknown function (DUF697) NJ56_RS14755 PF08808 RES domain NJ56_RS14760 PF09722 Protein of unknown function (DUF2384) NJ56_RS14765 PF00158 Sigma-54 interaction domain NJ56_RS14765 PF18024 Helix-turn-helix domain NJ56_RS14770 PF08534 Redoxin NJ56_RS14775 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NJ56_RS14775 PF13378 Enolase C-terminal domain-like NJ56_RS14780 PF00246 Zinc carboxypeptidase NJ56_RS14785 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NJ56_RS14790 PF01544 CorA-like Mg2+ transporter protein NJ56_RS14795 PF01171 PP-loop family NJ56_RS14800 PF10371 Domain of unknown function NJ56_RS14800 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg NJ56_RS14800 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NJ56_RS14800 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II NJ56_RS14800 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase NJ56_RS14805 PF00893 Small Multidrug Resistance protein NJ56_RS14810 PF02308 MgtC family NJ56_RS14815 PF03891 Domain of unknown function (DUF333) NJ56_RS14820 PF03724 META domain NJ56_RS14825 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NJ56_RS14825 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NJ56_RS14830 PF11739 Dicarboxylate transport NJ56_RS14840 PF13617 YnbE-like lipoprotein NJ56_RS14845 PF07027 Protein of unknown function (DUF1318) NJ56_RS14850 PF02525 Flavodoxin-like fold NJ56_RS14860 PF00271 Helicase conserved C-terminal domain NJ56_RS14860 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold NJ56_RS14860 PF11898 Domain of unknown function (DUF3418) NJ56_RS14860 PF00270 DEAD/DEAH box helicase NJ56_RS14860 PF04408 Helicase associated domain (HA2) NJ56_RS14865 PF00089 Trypsin NJ56_RS14870 PF06392 Acid shock protein repeat NJ56_RS14875 PF01161 Phosphatidylethanolamine-binding protein NJ56_RS14880 PF12833 Helix-turn-helix domain NJ56_RS14890 PF00080 Copper/zinc superoxide dismutase (SODC) NJ56_RS14895 PF00672 HAMP domain NJ56_RS14895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NJ56_RS14895 PF00512 His Kinase A (phospho-acceptor) domain NJ56_RS14900 PF00486 Transcriptional regulatory protein, C terminal NJ56_RS14900 PF00072 Response regulator receiver domain NJ56_RS14910 PF13520 Amino acid permease NJ56_RS14915 PF07338 Protein of unknown function (DUF1471) NJ56_RS14920 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NJ56_RS14920 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch NJ56_RS14920 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NJ56_RS14925 PF02233 NAD(P) transhydrogenase beta subunit NJ56_RS14930 PF01261 Xylose isomerase-like TIM barrel NJ56_RS14935 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family NJ56_RS14940 PF00596 Class II Aldolase and Adducin N-terminal domain NJ56_RS14945 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NJ56_RS14950 PF03611 PTS system sugar-specific permease component NJ56_RS14955 PF00455 DeoR C terminal sensor domain NJ56_RS14955 PF08220 DeoR-like helix-turn-helix domain NJ56_RS14965 PF00582 Universal stress protein family NJ56_RS14970 PF13545 Crp-like helix-turn-helix domain NJ56_RS14970 PF00027 Cyclic nucleotide-binding domain NJ56_RS14975 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NJ56_RS14975 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NJ56_RS14980 PF06445 GyrI-like small molecule binding domain NJ56_RS14990 PF13419 Haloacid dehalogenase-like hydrolase NJ56_RS15030 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus NJ56_RS15030 PF01048 Phosphorylase superfamily NJ56_RS15055 PF01510 N-acetylmuramoyl-L-alanine amidase NJ56_RS15060 PF00106 short chain dehydrogenase NJ56_RS15065 PF02694 Uncharacterised BCR, YnfA/UPF0060 family NJ56_RS15070 PF06932 Protein of unknown function (DUF1283) NJ56_RS15075 PF06649 Protein of unknown function (DUF1161) NJ56_RS15080 PF00654 Voltage gated chloride channel NJ56_RS15090 PF00480 ROK family NJ56_RS15095 PF05472 DNA replication terminus site-binding protein (Ter protein) NJ56_RS15100 PF10415 Fumarase C C-terminus NJ56_RS15100 PF00206 Lyase NJ56_RS15105 PF01238 Phosphomannose isomerase type I NJ56_RS15110 PF06097 Bacterial protein of unknown function (DUF945) NJ56_RS15115 PF00962 Adenosine/AMP deaminase NJ56_RS15120 PF13593 SBF-like CPA transporter family (DUF4137) NJ56_RS15125 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NJ56_RS15125 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NJ56_RS15130 PF03848 Tellurite resistance protein TehB NJ56_RS15130 PF09313 Domain of unknown function (DUF1971) NJ56_RS15135 PF01268 Formate--tetrahydrofolate ligase NJ56_RS15140 PF10754 Protein of unknown function (DUF2569) NJ56_RS15145 PF02508 Rnf-Nqr subunit, membrane protein NJ56_RS15150 PF04060 Putative Fe-S cluster NJ56_RS15155 PF10531 SLBB domain NJ56_RS15155 PF13375 RnfC Barrel sandwich hybrid domain NJ56_RS15155 PF13237 4Fe-4S dicluster domain NJ56_RS15155 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit NJ56_RS15160 PF06445 GyrI-like small molecule binding domain NJ56_RS15160 PF12833 Helix-turn-helix domain NJ56_RS15165 PF03116 NQR2, RnfD, RnfE family NJ56_RS15170 PF04205 FMN-binding domain NJ56_RS15175 PF02508 Rnf-Nqr subunit, membrane protein NJ56_RS15180 PF10576 Iron-sulfur binding domain of endonuclease III NJ56_RS15180 PF00730 HhH-GPD superfamily base excision DNA repair protein NJ56_RS15180 PF00633 Helix-hairpin-helix motif NJ56_RS15185 PF00575 S1 RNA binding domain NJ56_RS15185 PF08206 Ribonuclease B OB domain NJ56_RS15185 PF00773 RNB domain NJ56_RS15190 PF08448 PAS fold NJ56_RS15190 PF00990 Diguanylate cyclase, GGDEF domain NJ56_RS15190 PF08447 PAS fold NJ56_RS15190 PF05231 MASE1 NJ56_RS15190 PF00563 EAL domain NJ56_RS15190 PF13426 PAS domain NJ56_RS15195 PF00923 Transaldolase/Fructose-6-phosphate aldolase NJ56_RS15200 PF05433 Glycine zipper 2TM domain NJ56_RS15205 PF01253 Translation initiation factor SUI1 NJ56_RS15210 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family NJ56_RS15215 PF07338 Protein of unknown function (DUF1471) NJ56_RS15225 PF18073 Rubredoxin metal binding domain NJ56_RS15230 PF06305 Lipopolysaccharide assembly protein A domain NJ56_RS15235 PF01569 PAP2 superfamily NJ56_RS15240 PF00925 GTP cyclohydrolase II NJ56_RS15245 PF00330 Aconitase family (aconitate hydratase) NJ56_RS15245 PF00694 Aconitase C-terminal domain NJ56_RS15260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NJ56_RS15260 PF03466 LysR substrate binding domain NJ56_RS15265 PF01131 DNA topoisomerase NJ56_RS15265 PF08272 Topoisomerase I zinc-ribbon-like NJ56_RS15265 PF01751 Toprim domain NJ56_RS15265 PF01396 Topoisomerase DNA binding C4 zinc finger NJ56_RS15275 PF10692 Protein of unknown function (DUF2498) NJ56_RS15280 PF01343 Peptidase family S49 NJ56_RS15280 PF08496 Peptidase family S49 N-terminal NJ56_RS15285 PF00106 short chain dehydrogenase NJ56_RS15290 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP NJ56_RS15295 PF01479 S4 domain NJ56_RS15295 PF00849 RNA pseudouridylate synthase NJ56_RS15300 PF01300 Telomere recombination NJ56_RS15305 PF02811 PHP domain NJ56_RS15310 PF00425 chorismate binding enzyme NJ56_RS15310 PF04715 Anthranilate synthase component I, N terminal region NJ56_RS15315 PF00117 Glutamine amidotransferase class-I NJ56_RS15320 PF00591 Glycosyl transferase family, a/b domain NJ56_RS15320 PF02885 Glycosyl transferase family, helical bundle domain NJ56_RS15325 PF00218 Indole-3-glycerol phosphate synthase NJ56_RS15325 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase NJ56_RS15330 PF00291 Pyridoxal-phosphate dependent enzyme NJ56_RS15335 PF00290 Tryptophan synthase alpha chain NJ56_RS15345 PF03922 OmpW family NJ56_RS15350 PF03692 Putative zinc- or iron-chelating domain NJ56_RS15360 PF00916 Sulfate permease family NJ56_RS15360 PF01740 STAS domain NJ56_RS15365 PF04279 Intracellular septation protein A NJ56_RS15370 PF03061 Thioesterase superfamily NJ56_RS15375 PF03544 Gram-negative bacterial TonB protein C-terminal NJ56_RS15395 PF00577 Outer membrane usher protein NJ56_RS15395 PF13954 PapC N-terminal domain NJ56_RS15395 PF13953 PapC C-terminal domain NJ56_RS15400 PF02753 Pili assembly chaperone PapD, C-terminal domain NJ56_RS15400 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain NJ56_RS15410 PF00486 Transcriptional regulatory protein, C terminal NJ56_RS15425 PF03795 YCII-related domain NJ56_RS15445 PF13091 PLD-like domain NJ56_RS15445 PF13396 Phospholipase_D-nuclease N-terminal NJ56_RS15450 PF04269 Protein of unknown function, DUF440 NJ56_RS15455 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NJ56_RS15455 PF00005 ABC transporter NJ56_RS15460 PF00005 ABC transporter NJ56_RS15460 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NJ56_RS15465 PF12911 N-terminal TM domain of oligopeptide transport permease C NJ56_RS15465 PF00528 Binding-protein-dependent transport system inner membrane component NJ56_RS15470 PF00528 Binding-protein-dependent transport system inner membrane component NJ56_RS15475 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NJ56_RS15480 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NJ56_RS15490 PF01914 MarC family integral membrane protein NJ56_RS15500 PF00171 Aldehyde dehydrogenase family NJ56_RS15500 PF00465 Iron-containing alcohol dehydrogenase NJ56_RS15505 PF00265 Thymidine kinase NJ56_RS15510 PF00816 H-NS histone family NJ56_RS15515 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NJ56_RS15515 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NJ56_RS15515 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NJ56_RS15520 PF00072 Response regulator receiver domain NJ56_RS15525 PF01734 Patatin-like phospholipase NJ56_RS15530 PF02810 SEC-C motif NJ56_RS15535 PF01842 ACT domain NJ56_RS15535 PF00551 Formyl transferase NJ56_RS15555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NJ56_RS15555 PF03466 LysR substrate binding domain NJ56_RS15565 PF03372 Endonuclease/Exonuclease/phosphatase family NJ56_RS15570 PF00293 NUDIX domain NJ56_RS15575 PF07383 Protein of unknown function (DUF1496) NJ56_RS15580 PF01131 DNA topoisomerase NJ56_RS15580 PF01751 Toprim domain NJ56_RS15585 PF02769 AIR synthase related protein, C-terminal domain NJ56_RS15585 PF00586 AIR synthase related protein, N-terminal domain NJ56_RS15590 PF00881 Nitroreductase family NJ56_RS15595 PF01343 Peptidase family S49 NJ56_RS15600 PF17763 Glutaminase/Asparaginase C-terminal domain NJ56_RS15600 PF00710 Asparaginase, N-terminal NJ56_RS15605 PF00857 Isochorismatase family NJ56_RS15610 PF07023 Protein of unknown function (DUF1315) NJ56_RS15615 PF01641 SelR domain NJ56_RS15620 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NJ56_RS15620 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NJ56_RS15625 PF01263 Aldose 1-epimerase NJ56_RS15630 PF00884 Sulfatase NJ56_RS15635 PF00884 Sulfatase NJ56_RS15640 PF06629 MltA-interacting protein MipA NJ56_RS15650 PF06798 PrkA serine protein kinase C-terminal domain NJ56_RS15650 PF08298 PrkA AAA domain NJ56_RS15655 PF04285 Protein of unknown function (DUF444) NJ56_RS15660 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NJ56_RS15660 PF00205 Thiamine pyrophosphate enzyme, central domain NJ56_RS15660 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NJ56_RS15665 PF03306 Alpha-acetolactate decarboxylase NJ56_RS15670 PF03466 LysR substrate binding domain NJ56_RS15670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NJ56_RS15675 PF13426 PAS domain NJ56_RS15675 PF00990 Diguanylate cyclase, GGDEF domain NJ56_RS15675 PF00563 EAL domain NJ56_RS15685 PF07690 Major Facilitator Superfamily NJ56_RS15690 PF01168 Alanine racemase, N-terminal domain NJ56_RS15690 PF00842 Alanine racemase, C-terminal domain NJ56_RS15695 PF01266 FAD dependent oxidoreductase NJ56_RS15700 PF04293 SpoVR like protein NJ56_RS15705 PF00392 Bacterial regulatory proteins, gntR family NJ56_RS15705 PF07840 FadR C-terminal domain NJ56_RS15710 PF06450 Bacterial Na+/H+ antiporter B (NhaB) NJ56_RS15715 PF02600 Disulfide bond formation protein DsbB NJ56_RS15730 PF03692 Putative zinc- or iron-chelating domain NJ56_RS15735 PF01557 Fumarylacetoacetate (FAA) hydrolase family NJ56_RS15740 PF05166 YcgL domain NJ56_RS15745 PF05209 Septum formation inhibitor MinC, N-terminal domain NJ56_RS15745 PF03775 Septum formation inhibitor MinC, C-terminal domain NJ56_RS15750 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NJ56_RS15755 PF03776 Septum formation topological specificity factor MinE NJ56_RS15760 PF01612 3'-5' exonuclease NJ56_RS15760 PF00570 HRDC domain NJ56_RS15765 PF00501 AMP-binding enzyme NJ56_RS15765 PF13193 AMP-binding enzyme C-terminal domain NJ56_RS15770 PF03843 Outer membrane lipoprotein Slp family NJ56_RS15775 PF00814 Glycoprotease family NJ56_RS15780 PF13307 Helicase C-terminal domain NJ56_RS15780 PF04851 Type III restriction enzyme, res subunit NJ56_RS15785 PF01042 Endoribonuclease L-PSP NJ56_RS15790 PF00893 Small Multidrug Resistance protein NJ56_RS15795 PF00893 Small Multidrug Resistance protein NJ56_RS15800 PF01081 KDPG and KHG aldolase NJ56_RS15805 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain NJ56_RS15805 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain NJ56_RS15810 PF01380 SIS domain NJ56_RS15810 PF01418 Helix-turn-helix domain, rpiR family NJ56_RS15815 PF00224 Pyruvate kinase, barrel domain NJ56_RS15815 PF02887 Pyruvate kinase, alpha/beta domain NJ56_RS15820 PF03279 Bacterial lipid A biosynthesis acyltransferase NJ56_RS15825 PF01476 LysM domain NJ56_RS15825 PF01551 Peptidase family M23 NJ56_RS15825 PF08525 Opacity-associated protein A N-terminal motif NJ56_RS15830 PF01297 Zinc-uptake complex component A periplasmic NJ56_RS15835 PF00005 ABC transporter NJ56_RS15840 PF00950 ABC 3 transport family NJ56_RS15845 PF00854 POT family NJ56_RS15850 PF17864 RuvB AAA lid domain NJ56_RS15850 PF05491 RuvB C-terminal winged helix domain NJ56_RS15850 PF05496 Holliday junction DNA helicase RuvB P-loop domain NJ56_RS15855 PF01330 RuvA N terminal domain NJ56_RS15855 PF07499 RuvA, C-terminal domain NJ56_RS15860 PF02075 Crossover junction endodeoxyribonuclease RuvC NJ56_RS15865 PF01709 Transcriptional regulator NJ56_RS15870 PF00293 NUDIX domain NJ56_RS15875 PF01336 OB-fold nucleic acid binding domain NJ56_RS15875 PF00152 tRNA synthetases class II (D, K and N) NJ56_RS15875 PF02938 GAD domain NJ56_RS15885 PF01904 Protein of unknown function DUF72 NJ56_RS15890 PF01124 MAPEG family NJ56_RS15895 PF13649 Methyltransferase domain NJ56_RS15900 PF08003 Protein of unknown function (DUF1698) NJ56_RS15905 PF03932 CutC family NJ56_RS15910 PF06185 YecM protein NJ56_RS15915 PF05746 DALR anticodon binding domain NJ56_RS15915 PF03485 Arginyl tRNA synthetase N terminal domain NJ56_RS15915 PF00750 tRNA synthetases class I (R) NJ56_RS15925 PF13332 Hemagglutinin repeat NJ56_RS15925 PF05860 haemagglutination activity domain NJ56_RS15930 PF08479 POTRA domain, ShlB-type NJ56_RS15930 PF17287 POTRA domain NJ56_RS15930 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB NJ56_RS15935 PF03023 Lipid II flippase MurJ NJ56_RS15940 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NJ56_RS15945 PF04337 Protein of unknown function, DUF480 NJ56_RS15950 PF13302 Acetyltransferase (GNAT) domain NJ56_RS15955 PF07690 Major Facilitator Superfamily NJ56_RS15965 PF07273 Protein of unknown function (DUF1439) NJ56_RS15970 PF02613 Nitrate reductase delta subunit NJ56_RS15975 PF02811 PHP domain NJ56_RS15980 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NJ56_RS15985 PF00854 POT family NJ56_RS15995 PF03009 Glycerophosphoryl diester phosphodiesterase family NJ56_RS16005 PF00990 Diguanylate cyclase, GGDEF domain NJ56_RS16010 PF01740 STAS domain NJ56_RS16010 PF00916 Sulfate permease family NJ56_RS16015 PF00793 DAHP synthetase I family NJ56_RS16020 PF13369 Transglutaminase-like superfamily NJ56_RS16025 PF04247 Invasion gene expression up-regulator, SirB NJ56_RS16030 PF13847 Methyltransferase domain NJ56_RS16030 PF17827 PrmC N-terminal domain NJ56_RS16035 PF00472 RF-1 domain NJ56_RS16035 PF03462 PCRF domain NJ56_RS16040 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain NJ56_RS16040 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain NJ56_RS16040 PF01488 Shikimate / quinate 5-dehydrogenase NJ56_RS16045 PF03550 Outer membrane lipoprotein LolB NJ56_RS16050 PF00288 GHMP kinases N terminal domain NJ56_RS16050 PF08544 GHMP kinases C terminal NJ56_RS16055 PF14572 Phosphoribosyl synthetase-associated domain NJ56_RS16055 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NJ56_RS16060 PF10762 Protein of unknown function (DUF2583) NJ56_RS16065 PF01195 Peptidyl-tRNA hydrolase NJ56_RS16075 PF01926 50S ribosome-binding GTPase NJ56_RS16075 PF06071 Protein of unknown function (DUF933) NJ56_RS16085 PF01590 GAF domain NJ56_RS16085 PF00158 Sigma-54 interaction domain NJ56_RS16085 PF02954 Bacterial regulatory protein, Fis family NJ56_RS16090 PF02769 AIR synthase related protein, C-terminal domain NJ56_RS16090 PF00586 AIR synthase related protein, N-terminal domain NJ56_RS16095 PF01924 Hydrogenase formation hypA family NJ56_RS16100 PF01455 HupF/HypC family NJ56_RS16105 PF02492 CobW/HypB/UreG, nucleotide-binding domain NJ56_RS16110 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA NJ56_RS16115 PF11046 Transcriptional repressor of hyc and hyp operons NJ56_RS16120 PF13247 4Fe-4S dicluster domain NJ56_RS16125 PF00361 Proton-conducting membrane transporter NJ56_RS16130 PF00146 NADH dehydrogenase NJ56_RS16135 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit NJ56_RS16135 PF00374 Nickel-dependent hydrogenase NJ56_RS16135 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NJ56_RS16140 PF12838 4Fe-4S dicluster domain NJ56_RS16145 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit NJ56_RS16150 PF07450 Formate hydrogenlyase maturation protein HycH NJ56_RS16155 PF01750 Hydrogenase maturation protease NJ56_RS16160 PF13247 4Fe-4S dicluster domain NJ56_RS16160 PF12800 4Fe-4S binding domain NJ56_RS16165 PF01568 Molydopterin dinucleotide binding domain NJ56_RS16165 PF00384 Molybdopterin oxidoreductase NJ56_RS16165 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NJ56_RS16170 PF00708 Acylphosphatase NJ56_RS16170 PF17788 HypF Kae1-like domain NJ56_RS16170 PF07503 HypF finger NJ56_RS16170 PF01300 Telomere recombination NJ56_RS16175 PF03824 High-affinity nickel-transport protein NJ56_RS16185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NJ56_RS16185 PF03466 LysR substrate binding domain NJ56_RS16190 PF05962 HutD NJ56_RS16195 PF01979 Amidohydrolase family NJ56_RS16200 PF00392 Bacterial regulatory proteins, gntR family NJ56_RS16200 PF07702 UTRA domain NJ56_RS16205 PF01979 Amidohydrolase family NJ56_RS16215 PF00267 Gram-negative porin NJ56_RS16220 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family NJ56_RS16225 PF04996 Succinylarginine dihydrolase NJ56_RS16230 PF00171 Aldehyde dehydrogenase family NJ56_RS16235 PF04958 Arginine N-succinyltransferase beta subunit NJ56_RS16240 PF00202 Aminotransferase class-III NJ56_RS16245 PF00155 Aminotransferase class I and II NJ56_RS16245 PF00392 Bacterial regulatory proteins, gntR family NJ56_RS16250 PF01654 Cytochrome bd terminal oxidase subunit I NJ56_RS16255 PF02322 Cytochrome bd terminal oxidase subunit II NJ56_RS16265 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term NJ56_RS16265 PF07730 Histidine kinase NJ56_RS16265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NJ56_RS16265 PF00672 HAMP domain NJ56_RS16270 PF04954 Siderophore-interacting protein NJ56_RS16270 PF08021 Siderophore-interacting FAD-binding domain NJ56_RS16275 PF01699 Sodium/calcium exchanger protein NJ56_RS16280 PF02562 PhoH-like protein NJ56_RS16285 PF12833 Helix-turn-helix domain NJ56_RS16285 PF02311 AraC-like ligand binding domain NJ56_RS16300 PF02321 Outer membrane efflux protein NJ56_RS16305 PF00529 HlyD membrane-fusion protein of T1SS NJ56_RS16310 PF00005 ABC transporter NJ56_RS16310 PF00664 ABC transporter transmembrane region NJ56_RS16315 PF02974 Protease inhibitor Inh NJ56_RS16320 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) NJ56_RS16320 PF08548 Peptidase M10 serralysin C terminal NJ56_RS16320 PF00413 Matrixin NJ56_RS16325 PF00939 Sodium:sulfate symporter transmembrane region NJ56_RS16330 PF17203 Single cache domain 3 NJ56_RS16330 PF00989 PAS fold NJ56_RS16330 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain NJ56_RS16330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NJ56_RS16335 PF00072 Response regulator receiver domain NJ56_RS16340 PF03390 2-hydroxycarboxylate transporter family NJ56_RS16345 PF00672 HAMP domain NJ56_RS16345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NJ56_RS16345 PF02203 Tar ligand binding domain homologue NJ56_RS16350 PF01432 Peptidase family M3 NJ56_RS16355 PF00232 Glycosyl hydrolase family 1 NJ56_RS16360 PF00765 Autoinducer synthase NJ56_RS16365 PF00196 Bacterial regulatory proteins, luxR family NJ56_RS16365 PF03472 Autoinducer binding domain NJ56_RS16370 PF00180 Isocitrate/isopropylmalate dehydrogenase NJ56_RS16375 PF00849 RNA pseudouridylate synthase NJ56_RS16380 PF00293 NUDIX domain NJ56_RS16390 PF04356 Protein of unknown function (DUF489) NJ56_RS16395 PF00206 Lyase NJ56_RS16395 PF08328 Adenylosuccinate lyase C-terminal NJ56_RS16405 PF00072 Response regulator receiver domain NJ56_RS16405 PF00486 Transcriptional regulatory protein, C terminal NJ56_RS16410 PF08918 PhoQ Sensor NJ56_RS16410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NJ56_RS16415 PF08007 Cupin superfamily protein NJ56_RS16420 PF01546 Peptidase family M20/M25/M40 NJ56_RS16420 PF07687 Peptidase dimerisation domain NJ56_RS16425 PF02146 Sir2 family NJ56_RS16430 PF00480 ROK family NJ56_RS16435 PF02687 FtsX-like permease family NJ56_RS16435 PF12704 MacB-like periplasmic core domain NJ56_RS16440 PF00005 ABC transporter NJ56_RS16445 PF02687 FtsX-like permease family NJ56_RS16445 PF12704 MacB-like periplasmic core domain NJ56_RS16455 PF17757 UvrB interaction domain NJ56_RS16455 PF02559 CarD-like/TRCF domain NJ56_RS16455 PF00271 Helicase conserved C-terminal domain NJ56_RS16455 PF03461 TRCF domain NJ56_RS16455 PF00270 DEAD/DEAH box helicase NJ56_RS16460 PF05433 Glycine zipper 2TM domain NJ56_RS16465 PF07992 Pyridine nucleotide-disulphide oxidoreductase NJ56_RS16470 PF05728 Uncharacterised protein family (UPF0227) NJ56_RS16475 PF00933 Glycosyl hydrolase family 3 N terminal domain NJ56_RS16480 PF01636 Phosphotransferase enzyme family NJ56_RS16485 PF13036 Peptidoglycan-synthase activator LpoB NJ56_RS16485 PF08139 Prokaryotic membrane lipoprotein lipid attachment site NJ56_RS16490 PF07233 Protein of unknown function (DUF1425) NJ56_RS16495 PF01230 HIT domain NJ56_RS16500 PF02378 Phosphotransferase system, EIIC NJ56_RS16500 PF00367 phosphotransferase system, EIIB NJ56_RS16505 PF01026 TatD related DNase NJ56_RS16510 PF09115 DNA polymerase III, delta subunit, C terminal NJ56_RS16515 PF02223 Thymidylate kinase NJ56_RS16520 PF02618 YceG-like family NJ56_RS16525 PF01063 Amino-transferase class IV NJ56_RS16530 PF02801 Beta-ketoacyl synthase, C-terminal domain NJ56_RS16530 PF00109 Beta-ketoacyl synthase, N-terminal domain NJ56_RS16535 PF00550 Phosphopantetheine attachment site NJ56_RS16545 PF00698 Acyl transferase domain NJ56_RS16550 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NJ56_RS16550 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NJ56_RS16555 PF02504 Fatty acid synthesis protein NJ56_RS16560 PF01783 Ribosomal L32p protein family NJ56_RS16565 PF02620 Large ribosomal RNA subunit accumulation protein YceD NJ56_RS16570 PF02545 Maf-like protein NJ56_RS16575 PF01479 S4 domain NJ56_RS16575 PF00849 RNA pseudouridylate synthase NJ56_RS16585 PF10150 Ribonuclease E/G family NJ56_RS16585 PF12111 Polyribonucleotide phosphorylase C terminal NJ56_RS16585 PF00575 S1 RNA binding domain NJ56_RS16595 PF03992 Antibiotic biosynthesis monooxygenase NJ56_RS16600 PF01979 Amidohydrolase family NJ56_RS16605 PF06183 DinI-like family NJ56_RS16610 PF13991 BssS protein family NJ56_RS16615 PF01266 FAD dependent oxidoreductase NJ56_RS16620 PF00196 Bacterial regulatory proteins, luxR family NJ56_RS16625 PF01594 AI-2E family transporter NJ56_RS16630 PF17773 UPF0176 acylphosphatase like domain NJ56_RS16630 PF00581 Rhodanese-like domain NJ56_RS16630 PF12368 Rhodanase C-terminal NJ56_RS16635 PF03279 Bacterial lipid A biosynthesis acyltransferase NJ56_RS16645 PF00854 POT family NJ56_RS16655 PF00535 Glycosyl transferase family 2 NJ56_RS16660 PF04349 Periplasmic glucan biosynthesis protein, MdoG NJ56_RS16665 PF01757 Acyltransferase family NJ56_RS16675 PF03471 Transporter associated domain NJ56_RS16675 PF00999 Sodium/hydrogen exchanger family NJ56_RS16675 PF02080 TrkA-C domain NJ56_RS16680 PF00484 Carbonic anhydrase NJ56_RS16690 PF04358 DsrC like protein NJ56_RS16695 PF00708 Acylphosphatase NJ56_RS16700 PF17785 PUA-like domain NJ56_RS16700 PF10672 S-adenosylmethionine-dependent methyltransferase NJ56_RS16705 PF08755 Hemimethylated DNA-binding protein YccV like NJ56_RS16710 PF13380 CoA binding domain NJ56_RS16715 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) NJ56_RS16720 PF02142 MGS-like domain NJ56_RS16725 PF00580 UvrD/REP helicase N-terminal domain NJ56_RS16725 PF13361 UvrD-like helicase C-terminal domain NJ56_RS16725 PF12462 DNA helicase IV / RNA helicase N terminal NJ56_RS16730 PF03733 Inner membrane component domain NJ56_RS16735 PF12805 FUSC-like inner membrane protein yccS NJ56_RS16740 PF04994 TfoX C-terminal domain NJ56_RS16740 PF04993 TfoX N-terminal domain NJ56_RS16745 PF03846 Cell division inhibitor SulA NJ56_RS16750 PF01389 OmpA-like transmembrane domain NJ56_RS16750 PF00691 OmpA family NJ56_RS16755 PF06303 MatP N-terminal domain NJ56_RS16755 PF17414 MatP C-terminal ribbon-helix-helix domain NJ56_RS16760 PF05362 Lon protease (S16) C-terminal proteolytic domain NJ56_RS16760 PF13654 AAA domain NJ56_RS16765 PF07977 FabA-like domain NJ56_RS16770 PF04957 Ribosome modulation factor NJ56_RS16775 PF03886 ABC-type transport auxiliary lipoprotein component NJ56_RS16780 PF02470 MlaD protein NJ56_RS16785 PF04403 Paraquat-inducible protein A NJ56_RS16790 PF16326 ABC transporter C-terminal domain NJ56_RS16790 PF00005 ABC transporter NJ56_RS16790 PF12848 ABC transporter NJ56_RS16795 PF10672 S-adenosylmethionine-dependent methyltransferase NJ56_RS16795 PF02926 THUMP domain NJ56_RS16795 PF01170 Putative RNA methylase family UPF0020 NJ56_RS16800 PF00111 2Fe-2S iron-sulfur cluster binding domain NJ56_RS16800 PF03473 MOSC domain NJ56_RS16800 PF03476 MOSC N-terminal beta barrel domain NJ56_RS16805 PF07126 Cell-division protein ZapC NJ56_RS16810 PF01180 Dihydroorotate dehydrogenase NJ56_RS16815 PF01433 Peptidase family M1 domain NJ56_RS16815 PF17432 Domain of unknown function (DUF3458_C) ARM repeats NJ56_RS16815 PF11940 Domain of unknown function (DUF3458) Ig-like fold NJ56_RS16820 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain NJ56_RS16820 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family NJ56_RS16825 PF01336 OB-fold nucleic acid binding domain NJ56_RS16825 PF00152 tRNA synthetases class II (D, K and N) NJ56_RS16830 PF00267 Gram-negative porin NJ56_RS16835 PF00155 Aminotransferase class I and II NJ56_RS16840 PF00753 Metallo-beta-lactamase superfamily NJ56_RS16845 PF05951 Bacterial protein of unknown function (DUF882) NJ56_RS16850 PF01471 Putative peptidoglycan binding domain NJ56_RS16850 PF03734 L,D-transpeptidase catalytic domain NJ56_RS16855 PF04310 MukB N-terminal NJ56_RS16855 PF16330 MukB hinge domain NJ56_RS16860 PF04288 MukE-like family NJ56_RS16865 PF17192 MukF middle domain NJ56_RS16865 PF03882 MukF winged-helix domain NJ56_RS16865 PF17193 MukF C-terminal domain NJ56_RS16870 PF13847 Methyltransferase domain NJ56_RS16875 PF02698 DUF218 domain NJ56_RS16880 PF01636 Phosphotransferase enzyme family NJ56_RS16885 PF02348 Cytidylyltransferase NJ56_RS16890 PF03966 Trm112p-like protein NJ56_RS16895 PF00313 'Cold-shock' DNA-binding domain NJ56_RS16900 PF00313 'Cold-shock' DNA-binding domain NJ56_RS16905 PF07063 Domain of unknown function (DUF1338) NJ56_RS16910 PF02606 Tetraacyldisaccharide-1-P 4'-kinase NJ56_RS16915 PF00664 ABC transporter transmembrane region NJ56_RS16915 PF00005 ABC transporter NJ56_RS16920 PF00753 Metallo-beta-lactamase superfamily NJ56_RS16920 PF03772 Competence protein NJ56_RS16925 PF00216 Bacterial DNA-binding protein NJ56_RS16930 PF00575 S1 RNA binding domain NJ56_RS16935 PF02224 Cytidylate kinase NJ56_RS16940 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NJ56_RS16945 PF00266 Aminotransferase class-V NJ56_RS16950 PF17763 Glutaminase/Asparaginase C-terminal domain NJ56_RS16950 PF00710 Asparaginase, N-terminal NJ56_RS16955 PF18381 YcaO cyclodehydratase C-terminal domain NJ56_RS16955 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding NJ56_RS16960 PF01226 Formate/nitrite transporter NJ56_RS16965 PF01228 Glycine radical NJ56_RS16965 PF02901 Pyruvate formate lyase-like NJ56_RS16970 PF04055 Radical SAM superfamily NJ56_RS16975 PF07690 Major Facilitator Superfamily NJ56_RS16980 PF02403 Seryl-tRNA synthetase N-terminal domain NJ56_RS16980 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NJ56_RS16985 PF00004 ATPase family associated with various cellular activities (AAA) NJ56_RS16985 PF16193 AAA C-terminal domain NJ56_RS16985 PF12002 MgsA AAA+ ATPase C terminal NJ56_RS16990 PF03548 Outer membrane lipoprotein carrier protein LolA NJ56_RS16995 PF17854 FtsK alpha domain NJ56_RS16995 PF13491 4TM region of DNA translocase FtsK/SpoIIIE NJ56_RS16995 PF01580 FtsK/SpoIIIE family NJ56_RS16995 PF09397 Ftsk gamma domain NJ56_RS17000 PF01037 Lrp/AsnC ligand binding domain NJ56_RS17005 PF07992 Pyridine nucleotide-disulphide oxidoreductase NJ56_RS17010 PF00664 ABC transporter transmembrane region NJ56_RS17010 PF00005 ABC transporter NJ56_RS17015 PF00664 ABC transporter transmembrane region NJ56_RS17015 PF00005 ABC transporter NJ56_RS17020 PF03588 Leucyl/phenylalanyl-tRNA protein transferase NJ56_RS17025 PF01176 Translation initiation factor 1A / IF-1 NJ56_RS17030 PF07724 AAA domain (Cdc48 subfamily) NJ56_RS17030 PF00004 ATPase family associated with various cellular activities (AAA) NJ56_RS17030 PF17871 AAA lid domain NJ56_RS17030 PF10431 C-terminal, D2-small domain, of ClpB protein NJ56_RS17030 PF02861 Clp amino terminal domain, pathogenicity island component NJ56_RS17035 PF02617 ATP-dependent Clp protease adaptor protein ClpS NJ56_RS17040 PF00313 'Cold-shock' DNA-binding domain NJ56_RS17045 PF02687 FtsX-like permease family NJ56_RS17045 PF12704 MacB-like periplasmic core domain NJ56_RS17045 PF00005 ABC transporter NJ56_RS17050 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NJ56_RS17055 PF04393 Protein of unknown function (DUF535) NJ56_RS17060 PF11398 Protein of unknown function (DUF2813) NJ56_RS17065 PF03956 Lysine exporter LysO NJ56_RS17070 PF03063 Prismane/CO dehydrogenase family NJ56_RS17075 PF00970 Oxidoreductase FAD-binding domain NJ56_RS17075 PF00111 2Fe-2S iron-sulfur cluster binding domain NJ56_RS17075 PF00175 Oxidoreductase NAD-binding domain NJ56_RS17080 PF01212 Beta-eliminating lyase NJ56_RS17085 PF13460 NAD(P)H-binding NJ56_RS17085 PF11066 Protein of unknown function (DUF2867) NJ56_RS17090 PF01370 NAD dependent epimerase/dehydratase family NJ56_RS17095 PF01906 Putative heavy-metal-binding NJ56_RS17100 PF12883 Protein of unknown function (DUF3828) NJ56_RS17105 PF00005 ABC transporter NJ56_RS17110 PF00497 Bacterial extracellular solute-binding proteins, family 3 NJ56_RS17115 PF00528 Binding-protein-dependent transport system inner membrane component NJ56_RS17120 PF00528 Binding-protein-dependent transport system inner membrane component NJ56_RS17125 PF00497 Bacterial extracellular solute-binding proteins, family 3 NJ56_RS17130 PF05958 tRNA (Uracil-5-)-methyltransferase NJ56_RS17135 PF10767 Protein of unknown function (DUF2593) NJ56_RS17140 PF00528 Binding-protein-dependent transport system inner membrane component NJ56_RS17145 PF00528 Binding-protein-dependent transport system inner membrane component NJ56_RS17150 PF08402 TOBE domain NJ56_RS17150 PF00005 ABC transporter NJ56_RS17155 PF13416 Bacterial extracellular solute-binding protein NJ56_RS17160 PF10722 Putative bacterial sensory transduction regulator NJ56_RS17165 PF07214 Protein of unknown function (DUF1418) NJ56_RS17170 PF00462 Glutaredoxin NJ56_RS17175 PF06826 Predicted Permease Membrane Region NJ56_RS17175 PF02080 TrkA-C domain NJ56_RS17185 PF01569 PAP2 superfamily NJ56_RS17190 PF01791 DeoC/LacD family aldolase NJ56_RS17195 PF00455 DeoR C terminal sensor domain NJ56_RS17195 PF08220 DeoR-like helix-turn-helix domain NJ56_RS17205 PF03315 Serine dehydratase beta chain NJ56_RS17205 PF03313 Serine dehydratase alpha chain NJ56_RS17210 PF07943 Penicillin-binding protein 5, C-terminal domain NJ56_RS17210 PF00768 D-alanyl-D-alanine carboxypeptidase NJ56_RS17215 PF00571 CBS domain NJ56_RS17215 PF00291 Pyridoxal-phosphate dependent enzyme NJ56_RS17220 PF01053 Cys/Met metabolism PLP-dependent enzyme NJ56_RS17235 PF00043 Glutathione S-transferase, C-terminal domain NJ56_RS17235 PF13417 Glutathione S-transferase, N-terminal domain NJ56_RS17240 PF01370 NAD dependent epimerase/dehydratase family NJ56_RS17245 PF08029 HisG, C-terminal domain NJ56_RS17245 PF01634 ATP phosphoribosyltransferase NJ56_RS17250 PF00815 Histidinol dehydrogenase NJ56_RS17255 PF00155 Aminotransferase class I and II NJ56_RS17260 PF00475 Imidazoleglycerol-phosphate dehydratase NJ56_RS17265 PF00117 Glutamine amidotransferase class-I NJ56_RS17270 PF00977 Histidine biosynthesis protein NJ56_RS17275 PF00977 Histidine biosynthesis protein NJ56_RS17280 PF01502 Phosphoribosyl-AMP cyclohydrolase NJ56_RS17280 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase NJ56_RS17285 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain NJ56_RS17285 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NJ56_RS17290 PF00483 Nucleotidyl transferase NJ56_RS17295 PF00483 Nucleotidyl transferase NJ56_RS17300 PF00571 CBS domain NJ56_RS17300 PF03741 Integral membrane protein TerC family NJ56_RS17300 PF03471 Transporter associated domain NJ56_RS17305 PF03606 C4-dicarboxylate anaerobic carrier NJ56_RS17310 PF05170 AsmA family NJ56_RS17315 PF00692 dUTPase NJ56_RS17320 PF00485 Phosphoribulokinase / Uridine kinase family NJ56_RS17325 PF10609 NUBPL iron-transfer P-loop NTPase NJ56_RS17330 PF01588 Putative tRNA binding domain NJ56_RS17330 PF09334 tRNA synthetases class I (M) NJ56_RS17340 PF03788 LrgA family NJ56_RS17345 PF04172 LrgB-like family NJ56_RS17350 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NJ56_RS17350 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region NJ56_RS17355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NJ56_RS17355 PF03466 LysR substrate binding domain NJ56_RS17365 PF00390 Malic enzyme, N-terminal domain NJ56_RS17365 PF03949 Malic enzyme, NAD binding domain NJ56_RS17370 PF02698 DUF218 domain NJ56_RS17375 PF02653 Branched-chain amino acid transport system / permease component NJ56_RS17380 PF00005 ABC transporter NJ56_RS17385 PF13407 Periplasmic binding protein domain NJ56_RS17390 PF00356 Bacterial regulatory proteins, lacI family NJ56_RS17395 PF04235 Protein of unknown function (DUF418) NJ56_RS17400 PF01227 GTP cyclohydrolase I NJ56_RS17405 PF06779 Uncharacterised MFS-type transporter YbfB NJ56_RS17410 PF03466 LysR substrate binding domain NJ56_RS17410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NJ56_RS17415 PF08240 Alcohol dehydrogenase GroES-like domain NJ56_RS17415 PF00107 Zinc-binding dehydrogenase NJ56_RS17420 PF00756 Putative esterase NJ56_RS17430 PF03453 MoeA N-terminal region (domain I and II) NJ56_RS17430 PF03454 MoeA C-terminal region (domain IV) NJ56_RS17430 PF00994 Probable molybdopterin binding domain NJ56_RS17435 PF00899 ThiF family NJ56_RS17440 PF12848 ABC transporter NJ56_RS17440 PF00005 ABC transporter NJ56_RS17445 PF01545 Cation efflux family NJ56_RS17445 PF16916 Dimerisation domain of Zinc Transporter NJ56_RS17455 PF01769 Divalent cation transporter NJ56_RS17455 PF00571 CBS domain NJ56_RS17455 PF03448 MgtE intracellular N domain NJ56_RS17460 PF13505 Outer membrane protein beta-barrel domain NJ56_RS17465 PF00892 EamA-like transporter family NJ56_RS17470 PF13649 Methyltransferase domain NJ56_RS17475 PF00210 Ferritin-like domain NJ56_RS17480 PF00497 Bacterial extracellular solute-binding proteins, family 3 NJ56_RS17485 PF00528 Binding-protein-dependent transport system inner membrane component NJ56_RS17490 PF00005 ABC transporter NJ56_RS17495 PF05971 RNA methyltransferase NJ56_RS17500 PF02885 Glycosyl transferase family, helical bundle domain NJ56_RS17505 PF06733 DEAD_2 NJ56_RS17505 PF13307 Helicase C-terminal domain NJ56_RS17510 PF00267 Gram-negative porin NJ56_RS17515 PF00892 EamA-like transporter family NJ56_RS17525 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain NJ56_RS17525 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain NJ56_RS17525 PF01276 Orn/Lys/Arg decarboxylase, major domain NJ56_RS17530 PF13520 Amino acid permease NJ56_RS17535 PF00528 Binding-protein-dependent transport system inner membrane component NJ56_RS17540 PF00005 ABC transporter NJ56_RS17545 PF00528 Binding-protein-dependent transport system inner membrane component NJ56_RS17550 PF04069 Substrate binding domain of ABC-type glycine betaine transport system NJ56_RS17555 PF00581 Rhodanese-like domain NJ56_RS17560 PF07308 Protein of unknown function (DUF1456) NJ56_RS17565 PF00528 Binding-protein-dependent transport system inner membrane component NJ56_RS17570 PF00528 Binding-protein-dependent transport system inner membrane component NJ56_RS17580 PF00005 ABC transporter NJ56_RS17585 PF04226 Transglycosylase associated protein NJ56_RS17595 PF01844 HNH endonuclease NJ56_RS17600 PF01928 CYTH domain NJ56_RS17615 PF13166 AAA domain NJ56_RS17630 PF00872 Transposase, Mutator family NJ56_RS17650 PF13091 PLD-like domain NJ56_RS17690 PF06122 Conjugative relaxosome accessory transposon protein NJ56_RS17715 PF06834 TraU protein NJ56_RS17940 PF18340 DNA relaxase TraI 2B/2B-like domain NJ56_RS17940 PF07057 DNA helicase TraI NJ56_RS17940 PF18272 single-stranded DNA binding TraI N-terminal subdomain NJ56_RS17940 PF08751 TrwC relaxase NJ56_RS17980 PF00589 Phage integrase family NJ56_RS18030 PF00239 Resolvase, N terminal domain NJ56_RS18030 PF02796 Helix-turn-helix domain of resolvase NJ56_RS18070 PF11798 IMS family HHH motif NJ56_RS18070 PF00817 impB/mucB/samB family NJ56_RS18070 PF13438 Domain of unknown function (DUF4113) NJ56_RS18070 PF11799 impB/mucB/samB family C-terminal domain NJ56_RS18075 PF00717 Peptidase S24-like NJ56_RS18080 PF02195 ParB-like nuclease domain NJ56_RS18135 PF01464 Transglycosylase SLT domain NJ56_RS18140 PF05261 TraM protein, DNA-binding NJ56_RS18155 PF05513 TraA NJ56_RS18160 PF07178 TraL protein NJ56_RS18165 PF05309 TraE protein NJ56_RS18170 PF06586 TraK protein NJ56_RS18175 PF03743 Bacterial conjugation TrbI-like protein NJ56_RS18180 PF09676 Type IV conjugative transfer system lipoprotein (TraV) NJ56_RS18185 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer NJ56_RS18195 PF12477 Sex factor F TraW protein N terminal NJ56_RS18200 PF06834 TraU protein NJ56_RS18205 PF09673 Type-F conjugative transfer system pilin assembly protein NJ56_RS18210 PF06986 Type-1V conjugative transfer system mating pair stabilisation NJ56_RS18215 PF13728 F plasmid transfer operon protein NJ56_RS18220 PF13728 F plasmid transfer operon protein NJ56_RS18225 PF06122 Conjugative relaxosome accessory transposon protein NJ56_RS18230 PF07916 TraG-like protein, N-terminal region NJ56_RS18240 PF10412 Type IV secretion-system coupling protein DNA-binding domain NJ56_RS18240 PF12615 F sex factor protein N terminal NJ56_RS18245 PF18340 DNA relaxase TraI 2B/2B-like domain NJ56_RS18245 PF08751 TrwC relaxase NJ56_RS18245 PF07057 DNA helicase TraI NJ56_RS18245 PF18272 single-stranded DNA binding TraI N-terminal subdomain NJ56_RS18270 PF13091 PLD-like domain NJ56_RS18285 PF01051 Initiator Replication protein