locus-tag class description FFE93_RS00005 PF11638 DnaA N-terminal domain FFE93_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix FFE93_RS00005 PF00308 Bacterial dnaA protein FFE93_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain FFE93_RS00010 PF02767 DNA polymerase III beta subunit, central domain FFE93_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain FFE93_RS00015 PF02463 RecF/RecN/SMC N terminal domain FFE93_RS00020 PF01751 Toprim domain FFE93_RS00020 PF18053 DNA gyrase B subunit insert domain FFE93_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus FFE93_RS00020 PF00204 DNA gyrase B FFE93_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFE93_RS00030 PF11254 Protein of unknown function (DUF3053) FFE93_RS00035 PF05746 DALR anticodon binding domain FFE93_RS00035 PF02092 Glycyl-tRNA synthetase beta subunit FFE93_RS00040 PF02091 Glycyl-tRNA synthetase alpha subunit FFE93_RS00045 PF03352 Methyladenine glycosylase FFE93_RS00050 PF00583 Acetyltransferase (GNAT) family FFE93_RS00060 PF00691 OmpA family FFE93_RS00060 PF13488 Glycine zipper FFE93_RS00070 PF07690 Major Facilitator Superfamily FFE93_RS00075 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FFE93_RS00075 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FFE93_RS00080 PF00128 Alpha amylase, catalytic domain FFE93_RS00085 PF00155 Aminotransferase class I and II FFE93_RS00090 PF02080 TrkA-C domain FFE93_RS00090 PF06826 Predicted Permease Membrane Region FFE93_RS00095 PF00011 Hsp20/alpha crystallin family FFE93_RS00100 PF00011 Hsp20/alpha crystallin family FFE93_RS00105 PF07119 Protein of unknown function (DUF1375) FFE93_RS00110 PF07676 WD40-like Beta Propeller Repeat FFE93_RS00110 PF12566 Protein of unknown function (DUF3748) FFE93_RS00115 PF09217 Restriction endonuclease EcoRII, N-terminal FFE93_RS00115 PF09019 EcoRII C terminal FFE93_RS00120 PF03852 DNA mismatch endonuclease Vsr FFE93_RS00125 PF00145 C-5 cytosine-specific DNA methylase FFE93_RS00125 PF18284 DNA methylase N-terminal domain FFE93_RS00130 PF08348 YheO-like PAS domain FFE93_RS00130 PF13309 HTH domain FFE93_RS00135 PF00291 Pyridoxal-phosphate dependent enzyme FFE93_RS00140 PF02423 Ornithine cyclodeaminase/mu-crystallin family FFE93_RS00145 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FFE93_RS00145 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FFE93_RS00145 PF02378 Phosphotransferase system, EIIC FFE93_RS00150 PF01232 Mannitol dehydrogenase Rossmann domain FFE93_RS00150 PF08125 Mannitol dehydrogenase C-terminal domain FFE93_RS00155 PF05068 Mannitol repressor FFE93_RS00165 PF00155 Aminotransferase class I and II FFE93_RS00165 PF00392 Bacterial regulatory proteins, gntR family FFE93_RS00170 PF10928 Protein of unknown function (DUF2810) FFE93_RS00180 PF04221 RelB antitoxin FFE93_RS00185 PF03473 MOSC domain FFE93_RS00185 PF03475 3-alpha domain FFE93_RS00190 PF02203 Tar ligand binding domain homologue FFE93_RS00190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FFE93_RS00190 PF00672 HAMP domain FFE93_RS00200 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FFE93_RS00200 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FFE93_RS00205 PF02634 FdhD/NarQ family FFE93_RS00215 PF09163 Formate dehydrogenase N, transmembrane FFE93_RS00215 PF13247 4Fe-4S dicluster domain FFE93_RS00220 PF01292 Prokaryotic cytochrome b561 FFE93_RS00225 PF04216 Protein involved in formate dehydrogenase formation FFE93_RS00230 PF12390 Selenocysteine synthase N terminal FFE93_RS00230 PF03841 L-seryl-tRNA selenium transferase FFE93_RS00235 PF00009 Elongation factor Tu GTP binding domain FFE93_RS00235 PF03144 Elongation factor Tu domain 2 FFE93_RS00235 PF09107 Elongation factor SelB, winged helix FFE93_RS00235 PF09106 Elongation factor SelB, winged helix FFE93_RS00240 PF01261 Xylose isomerase-like TIM barrel FFE93_RS00250 PF07690 Major Facilitator Superfamily FFE93_RS00255 PF01757 Acyltransferase family FFE93_RS00270 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FFE93_RS00270 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FFE93_RS00280 PF13407 Periplasmic binding protein domain FFE93_RS00285 PF00005 ABC transporter FFE93_RS00290 PF02653 Branched-chain amino acid transport system / permease component FFE93_RS00295 PF12833 Helix-turn-helix domain FFE93_RS00300 PF03466 LysR substrate binding domain FFE93_RS00300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFE93_RS00305 PF00144 Beta-lactamase FFE93_RS00310 PF03960 ArsC family FFE93_RS00335 PF03755 YicC-like family, N-terminal region FFE93_RS00335 PF08340 Domain of unknown function (DUF1732) FFE93_RS00340 PF01138 3' exoribonuclease family, domain 1 FFE93_RS00340 PF03725 3' exoribonuclease family, domain 2 FFE93_RS00345 PF00156 Phosphoribosyl transferase domain FFE93_RS00350 PF00375 Sodium:dicarboxylate symporter family FFE93_RS00355 PF00675 Insulinase (Peptidase family M16) FFE93_RS00355 PF05193 Peptidase M16 inactive domain FFE93_RS00360 PF00294 pfkB family carbohydrate kinase FFE93_RS00365 PF01361 Tautomerase enzyme FFE93_RS00370 PF00563 EAL domain FFE93_RS00375 PF05170 AsmA family FFE93_RS00380 PF02611 CDP-diacylglycerol pyrophosphatase FFE93_RS00385 PF03631 Virulence factor BrkB FFE93_RS00390 PF02395 Immunoglobulin A1 protease FFE93_RS00390 PF03212 Pertactin FFE93_RS00395 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FFE93_RS00395 PF07992 Pyridine nucleotide-disulphide oxidoreductase FFE93_RS00400 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ FFE93_RS00405 PF01432 Peptidase family M3 FFE93_RS00410 PF04445 Putative SAM-dependent methyltransferase FFE93_RS00415 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) FFE93_RS00415 PF00413 Matrixin FFE93_RS00415 PF08548 Peptidase M10 serralysin C terminal FFE93_RS00420 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FFE93_RS00420 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FFE93_RS00430 PF03466 LysR substrate binding domain FFE93_RS00430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFE93_RS00450 PF02917 Pertussis toxin, subunit 1 FFE93_RS00455 PF13700 Domain of unknown function (DUF4158) FFE93_RS00455 PF01526 Tn3 transposase DDE domain FFE93_RS00460 PF02796 Helix-turn-helix domain of resolvase FFE93_RS00460 PF00239 Resolvase, N terminal domain FFE93_RS00465 PF06969 HemN C-terminal domain FFE93_RS00465 PF04055 Radical SAM superfamily FFE93_RS00480 PF04199 Putative cyclase FFE93_RS00485 PF00109 Beta-ketoacyl synthase, N-terminal domain FFE93_RS00485 PF02801 Beta-ketoacyl synthase, C-terminal domain FFE93_RS00510 PF07690 Major Facilitator Superfamily FFE93_RS00525 PF00582 Universal stress protein family FFE93_RS00530 PF10625 Universal stress protein B (UspB) FFE93_RS00535 PF01384 Phosphate transporter family FFE93_RS00565 PF02753 Pili assembly chaperone PapD, C-terminal domain FFE93_RS00565 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FFE93_RS00570 PF13953 PapC C-terminal domain FFE93_RS00570 PF13954 PapC N-terminal domain FFE93_RS00570 PF00577 Outer membrane usher protein FFE93_RS00575 PF16970 Type-1 fimbrial protein, A FFE93_RS00585 PF00583 Acetyltransferase (GNAT) family FFE93_RS00590 PF17954 Quercetinase C-terminal cupin domain FFE93_RS00590 PF02678 Pirin FFE93_RS00595 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FFE93_RS00595 PF00356 Bacterial regulatory proteins, lacI family FFE93_RS00600 PF02447 GntP family permease FFE93_RS00605 PF01202 Shikimate kinase FFE93_RS00610 PF01914 MarC family integral membrane protein FFE93_RS00615 PF01118 Semialdehyde dehydrogenase, NAD binding domain FFE93_RS00615 PF02774 Semialdehyde dehydrogenase, dimerisation domain FFE93_RS00620 PF06580 Histidine kinase FFE93_RS00620 PF07694 5TMR of 5TMR-LYT FFE93_RS00625 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FFE93_RS00625 PF00128 Alpha amylase, catalytic domain FFE93_RS00625 PF02806 Alpha amylase, C-terminal all-beta domain FFE93_RS00630 PF18390 Glycogen debranching enzyme C-terminal domain FFE93_RS00630 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FFE93_RS00630 PF00128 Alpha amylase, catalytic domain FFE93_RS00635 PF00483 Nucleotidyl transferase FFE93_RS00640 PF08323 Starch synthase catalytic domain FFE93_RS00640 PF00534 Glycosyl transferases group 1 FFE93_RS00645 PF00343 Carbohydrate phosphorylase FFE93_RS00650 PF01266 FAD dependent oxidoreductase FFE93_RS00650 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FFE93_RS00655 PF00455 DeoR C terminal sensor domain FFE93_RS00655 PF08220 DeoR-like helix-turn-helix domain FFE93_RS00660 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease FFE93_RS00660 PF01694 Rhomboid family FFE93_RS00665 PF00581 Rhodanese-like domain FFE93_RS00680 PF17874 MalT-like TPR region FFE93_RS00680 PF00196 Bacterial regulatory proteins, luxR family FFE93_RS00685 PF00343 Carbohydrate phosphorylase FFE93_RS00690 PF02446 4-alpha-glucanotransferase FFE93_RS00695 PF01521 Iron-sulphur cluster biosynthesis FFE93_RS00695 PF01106 NifU-like domain FFE93_RS00700 PF00156 Phosphoribosyl transferase domain FFE93_RS00705 PF00561 alpha/beta hydrolase fold FFE93_RS00710 PF09012 FeoC like transcriptional regulator FFE93_RS00715 PF07670 Nucleoside recognition FFE93_RS00715 PF17910 FeoB cytosolic helical domain FFE93_RS00715 PF02421 Ferrous iron transport protein B FFE93_RS00715 PF07664 Ferrous iron transport protein B C terminus FFE93_RS00720 PF04023 FeoA domain FFE93_RS00725 PF16921 Tex protein YqgF-like domain FFE93_RS00725 PF09371 Tex-like protein N-terminal domain FFE93_RS00725 PF00575 S1 RNA binding domain FFE93_RS00725 PF17674 HHH domain FFE93_RS00735 PF01272 Transcription elongation factor, GreA/GreB, C-term FFE93_RS00735 PF03449 Transcription elongation factor, N-terminal FFE93_RS00740 PF00072 Response regulator receiver domain FFE93_RS00740 PF00486 Transcriptional regulatory protein, C terminal FFE93_RS00745 PF00512 His Kinase A (phospho-acceptor) domain FFE93_RS00745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFE93_RS00745 PF00672 HAMP domain FFE93_RS00755 PF01293 Phosphoenolpyruvate carboxykinase FFE93_RS00760 PF01430 Hsp33 protein FFE93_RS00765 PF01479 S4 domain FFE93_RS00770 PF13419 Haloacid dehalogenase-like hydrolase FFE93_RS00775 PF07095 Intracellular growth attenuator protein IgaA FFE93_RS00780 PF00293 NUDIX domain FFE93_RS00785 PF00905 Penicillin binding protein transpeptidase domain FFE93_RS00785 PF17092 Penicillin-binding protein OB-like domain FFE93_RS00785 PF00912 Transglycosylase FFE93_RS00810 PF03958 Bacterial type II/III secretion system short domain FFE93_RS00810 PF00263 Bacterial type II and III secretion system protein FFE93_RS00815 PF01202 Shikimate kinase FFE93_RS00820 PF01761 3-dehydroquinate synthase FFE93_RS00825 PF05036 Sporulation related domain FFE93_RS00830 PF02086 D12 class N6 adenine-specific DNA methyltransferase FFE93_RS00835 PF00834 Ribulose-phosphate 3 epimerase family FFE93_RS00840 PF13419 Haloacid dehalogenase-like hydrolase FFE93_RS00845 PF00579 tRNA synthetases class I (W and Y) FFE93_RS00850 PF10414 Sirohaem synthase dimerisation region FFE93_RS00850 PF14824 Sirohaem biosynthesis protein central FFE93_RS00850 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FFE93_RS00855 PF01226 Formate/nitrite transporter FFE93_RS00860 PF13806 Rieske-like [2Fe-2S] domain FFE93_RS00865 PF07992 Pyridine nucleotide-disulphide oxidoreductase FFE93_RS00865 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FFE93_RS00865 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FFE93_RS00865 PF04324 BFD-like [2Fe-2S] binding domain FFE93_RS00865 PF18267 Rubredoxin NAD+ reductase C-terminal domain FFE93_RS00870 PF07969 Amidohydrolase family FFE93_RS00875 PF07690 Major Facilitator Superfamily FFE93_RS00890 PF00356 Bacterial regulatory proteins, lacI family FFE93_RS00895 PF02056 Family 4 glycosyl hydrolase FFE93_RS00895 PF11975 Family 4 glycosyl hydrolase C-terminal domain FFE93_RS00900 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FFE93_RS00905 PF05872 Bacterial protein of unknown function (DUF853) FFE93_RS00910 PF00117 Glutamine amidotransferase class-I FFE93_RS00915 PF00202 Aminotransferase class-III FFE93_RS00920 PF12805 FUSC-like inner membrane protein yccS FFE93_RS00925 PF00027 Cyclic nucleotide-binding domain FFE93_RS00925 PF13545 Crp-like helix-turn-helix domain FFE93_RS00930 PF02566 OsmC-like protein FFE93_RS00935 PF00485 Phosphoribulokinase / Uridine kinase family FFE93_RS00940 PF06794 Uncharacterised protein family (UPF0270) FFE93_RS00945 PF00561 alpha/beta hydrolase fold FFE93_RS00950 PF01810 LysE type translocator FFE93_RS00955 PF02567 Phenazine biosynthesis-like protein FFE93_RS00960 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FFE93_RS00965 PF00005 ABC transporter FFE93_RS00970 PF00528 Binding-protein-dependent transport system inner membrane component FFE93_RS00975 PF02668 Taurine catabolism dioxygenase TauD, TfdA family FFE93_RS00980 PF00535 Glycosyl transferase family 2 FFE93_RS00985 PF12848 ABC transporter FFE93_RS00985 PF00005 ABC transporter FFE93_RS00990 PF02525 Flavodoxin-like fold FFE93_RS00995 PF02254 TrkA-N domain FFE93_RS00995 PF00999 Sodium/hydrogen exchanger family FFE93_RS01000 PF09526 Probable metal-binding protein (DUF2387) FFE93_RS01005 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FFE93_RS01010 PF04102 SlyX FFE93_RS01015 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FFE93_RS01015 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FFE93_RS01020 PF08348 YheO-like PAS domain FFE93_RS01020 PF13309 HTH domain FFE93_RS01025 PF02635 DsrE/DsrF-like family FFE93_RS01030 PF02635 DsrE/DsrF-like family FFE93_RS01035 PF04077 DsrH like protein FFE93_RS01040 PF00164 Ribosomal protein S12/S23 FFE93_RS01045 PF00177 Ribosomal protein S7p/S5e FFE93_RS01050 PF03144 Elongation factor Tu domain 2 FFE93_RS01050 PF03764 Elongation factor G, domain IV FFE93_RS01050 PF14492 Elongation Factor G, domain II FFE93_RS01050 PF00679 Elongation factor G C-terminus FFE93_RS01050 PF00009 Elongation factor Tu GTP binding domain FFE93_RS01055 PF03143 Elongation factor Tu C-terminal domain FFE93_RS01055 PF03144 Elongation factor Tu domain 2 FFE93_RS01055 PF00009 Elongation factor Tu GTP binding domain FFE93_RS01060 PF04324 BFD-like [2Fe-2S] binding domain FFE93_RS01065 PF00210 Ferritin-like domain FFE93_RS01075 PF00338 Ribosomal protein S10p/S20e FFE93_RS01080 PF00297 Ribosomal protein L3 FFE93_RS01085 PF00573 Ribosomal protein L4/L1 family FFE93_RS01090 PF00276 Ribosomal protein L23 FFE93_RS01095 PF03947 Ribosomal Proteins L2, C-terminal domain FFE93_RS01095 PF00181 Ribosomal Proteins L2, RNA binding domain FFE93_RS01100 PF00203 Ribosomal protein S19 FFE93_RS01105 PF00237 Ribosomal protein L22p/L17e FFE93_RS01110 PF00189 Ribosomal protein S3, C-terminal domain FFE93_RS01110 PF07650 KH domain FFE93_RS01115 PF00252 Ribosomal protein L16p/L10e FFE93_RS01120 PF00831 Ribosomal L29 protein FFE93_RS01125 PF00366 Ribosomal protein S17 FFE93_RS01130 PF00238 Ribosomal protein L14p/L23e FFE93_RS01135 PF00467 KOW motif FFE93_RS01135 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 FFE93_RS01140 PF00281 Ribosomal protein L5 FFE93_RS01140 PF00673 ribosomal L5P family C-terminus FFE93_RS01145 PF00253 Ribosomal protein S14p/S29e FFE93_RS01150 PF00410 Ribosomal protein S8 FFE93_RS01155 PF00347 Ribosomal protein L6 FFE93_RS01160 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast FFE93_RS01165 PF03719 Ribosomal protein S5, C-terminal domain FFE93_RS01165 PF00333 Ribosomal protein S5, N-terminal domain FFE93_RS01170 PF00327 Ribosomal protein L30p/L7e FFE93_RS01175 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A FFE93_RS01180 PF00344 SecY translocase FFE93_RS01185 PF00444 Ribosomal protein L36 FFE93_RS01190 PF00416 Ribosomal protein S13/S18 FFE93_RS01195 PF00411 Ribosomal protein S11 FFE93_RS01200 PF01479 S4 domain FFE93_RS01200 PF00163 Ribosomal protein S4/S9 N-terminal domain FFE93_RS01205 PF01000 RNA polymerase Rpb3/RpoA insert domain FFE93_RS01205 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain FFE93_RS01205 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain FFE93_RS01210 PF01196 Ribosomal protein L17 FFE93_RS01215 PF09350 Domain of unknown function (DUF1992) FFE93_RS01220 PF13411 MerR HTH family regulatory protein FFE93_RS01225 PF03889 Alternative ribosome-rescue factor A FFE93_RS01230 PF01741 Large-conductance mechanosensitive channel, MscL FFE93_RS01235 PF02080 TrkA-C domain FFE93_RS01235 PF02254 TrkA-N domain FFE93_RS01240 PF01189 16S rRNA methyltransferase RsmB/F FFE93_RS01240 PF01029 NusB family FFE93_RS01245 PF02911 Formyl transferase, C-terminal domain FFE93_RS01245 PF00551 Formyl transferase FFE93_RS01250 PF01327 Polypeptide deformylase FFE93_RS01255 PF02481 DNA recombination-mediator protein A FFE93_RS01255 PF17782 DprA winged helix domain FFE93_RS01260 PF04361 Protein of unknown function (DUF494) FFE93_RS01265 PF01396 Topoisomerase DNA binding C4 zinc finger FFE93_RS01270 PF01300 Telomere recombination FFE93_RS01275 PF01488 Shikimate / quinate 5-dehydrogenase FFE93_RS01275 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FFE93_RS01275 PF08501 Shikimate dehydrogenase substrate binding domain FFE93_RS01280 PF00132 Bacterial transferase hexapeptide (six repeats) FFE93_RS01315 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FFE93_RS01315 PF01565 FAD binding domain FFE93_RS01320 PF02237 Biotin protein ligase C terminal domain FFE93_RS01320 PF08279 HTH domain FFE93_RS01320 PF03099 Biotin/lipoate A/B protein ligase family FFE93_RS01325 PF00485 Phosphoribulokinase / Uridine kinase family FFE93_RS01330 PF13673 Acetyltransferase (GNAT) domain FFE93_RS01360 PF03143 Elongation factor Tu C-terminal domain FFE93_RS01360 PF00009 Elongation factor Tu GTP binding domain FFE93_RS01360 PF03144 Elongation factor Tu domain 2 FFE93_RS01370 PF00584 SecE/Sec61-gamma subunits of protein translocation complex FFE93_RS01375 PF00467 KOW motif FFE93_RS01375 PF02357 Transcription termination factor nusG FFE93_RS01380 PF03946 Ribosomal protein L11, N-terminal domain FFE93_RS01380 PF00298 Ribosomal protein L11, RNA binding domain FFE93_RS01385 PF00687 Ribosomal protein L1p/L10e family FFE93_RS01390 PF00466 Ribosomal protein L10 FFE93_RS01395 PF00542 Ribosomal protein L7/L12 C-terminal domain FFE93_RS01395 PF16320 Ribosomal protein L7/L12 dimerisation domain FFE93_RS01400 PF04563 RNA polymerase beta subunit FFE93_RS01400 PF04561 RNA polymerase Rpb2, domain 2 FFE93_RS01400 PF10385 RNA polymerase beta subunit external 1 domain FFE93_RS01400 PF04560 RNA polymerase Rpb2, domain 7 FFE93_RS01400 PF04565 RNA polymerase Rpb2, domain 3 FFE93_RS01400 PF00562 RNA polymerase Rpb2, domain 6 FFE93_RS01405 PF04998 RNA polymerase Rpb1, domain 5 FFE93_RS01405 PF04997 RNA polymerase Rpb1, domain 1 FFE93_RS01405 PF00623 RNA polymerase Rpb1, domain 2 FFE93_RS01405 PF04983 RNA polymerase Rpb1, domain 3 FFE93_RS01405 PF05000 RNA polymerase Rpb1, domain 4 FFE93_RS01410 PF00388 Phosphatidylinositol-specific phospholipase C, X domain FFE93_RS01420 PF06968 Biotin and Thiamin Synthesis associated domain FFE93_RS01420 PF04055 Radical SAM superfamily FFE93_RS01425 PF05690 Thiazole biosynthesis protein ThiG FFE93_RS01430 PF02597 ThiS family FFE93_RS01435 PF00899 ThiF family FFE93_RS01440 PF02581 Thiamine monophosphate synthase FFE93_RS01445 PF13667 ThiC-associated domain FFE93_RS01445 PF01964 Radical SAM ThiC family FFE93_RS01450 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ FFE93_RS01455 PF00293 NUDIX domain FFE93_RS01455 PF09297 NADH pyrophosphatase zinc ribbon domain FFE93_RS01460 PF01208 Uroporphyrinogen decarboxylase (URO-D) FFE93_RS01465 PF04493 Endonuclease V FFE93_RS01470 PF04222 Protein of unknown function (DUF416) FFE93_RS01475 PF00216 Bacterial DNA-binding protein FFE93_RS01480 PF07356 Protein of unknown function (DUF1481) FFE93_RS01485 PF02843 Phosphoribosylglycinamide synthetase, C domain FFE93_RS01485 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain FFE93_RS01485 PF02844 Phosphoribosylglycinamide synthetase, N domain FFE93_RS01490 PF02142 MGS-like domain FFE93_RS01490 PF01808 AICARFT/IMPCHase bienzyme FFE93_RS01535 PF04204 Homoserine O-succinyltransferase FFE93_RS01540 PF01274 Malate synthase FFE93_RS01550 PF00463 Isocitrate lyase family FFE93_RS01555 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) FFE93_RS01560 PF09339 IclR helix-turn-helix domain FFE93_RS01560 PF01614 Bacterial transcriptional regulator FFE93_RS01565 PF02310 B12 binding domain FFE93_RS01565 PF02965 Vitamin B12 dependent methionine synthase, activation domain FFE93_RS01565 PF00809 Pterin binding enzyme FFE93_RS01565 PF02574 Homocysteine S-methyltransferase FFE93_RS01565 PF02607 B12 binding domain FFE93_RS01570 PF13332 Hemagglutinin repeat FFE93_RS01570 PF05860 haemagglutination activity domain FFE93_RS01575 PF08479 POTRA domain, ShlB-type FFE93_RS01575 PF17287 POTRA domain FFE93_RS01575 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB FFE93_RS01580 PF00696 Amino acid kinase family FFE93_RS01580 PF01842 ACT domain FFE93_RS01585 PF00342 Phosphoglucose isomerase FFE93_RS01590 PF06146 Phosphate-starvation-inducible E FFE93_RS01595 PF00528 Binding-protein-dependent transport system inner membrane component FFE93_RS01600 PF14785 Maltose transport system permease protein MalF P2 domain FFE93_RS01600 PF00528 Binding-protein-dependent transport system inner membrane component FFE93_RS01605 PF01547 Bacterial extracellular solute-binding protein FFE93_RS01615 PF17912 MalK OB fold domain FFE93_RS01615 PF00005 ABC transporter FFE93_RS01620 PF02264 LamB porin FFE93_RS01625 PF07148 Maltose operon periplasmic protein precursor (MalM) FFE93_RS01630 PF04345 Chorismate lyase FFE93_RS01635 PF01040 UbiA prenyltransferase family FFE93_RS01640 PF01553 Acyltransferase FFE93_RS01645 PF01219 Prokaryotic diacylglycerol kinase FFE93_RS01650 PF00717 Peptidase S24-like FFE93_RS01650 PF01726 LexA DNA binding domain FFE93_RS01655 PF05532 CsbD-like FFE93_RS01660 PF01475 Ferric uptake regulator family FFE93_RS01665 PF01207 Dihydrouridine synthase (Dus) FFE93_RS01670 PF09583 Phage shock protein G (Phageshock_PspG) FFE93_RS01680 PF00107 Zinc-binding dehydrogenase FFE93_RS01680 PF08240 Alcohol dehydrogenase GroES-like domain FFE93_RS01685 PF00772 DnaB-like helicase N terminal domain FFE93_RS01685 PF03796 DnaB-like helicase C terminal domain FFE93_RS01690 PF01168 Alanine racemase, N-terminal domain FFE93_RS01690 PF00842 Alanine racemase, C-terminal domain FFE93_RS01695 PF00155 Aminotransferase class I and II FFE93_RS01700 PF04237 YjbR FFE93_RS01705 PF17755 UvrA DNA-binding domain FFE93_RS01705 PF17760 UvrA interaction domain FFE93_RS01705 PF00005 ABC transporter FFE93_RS01710 PF00436 Single-strand binding protein family FFE93_RS01730 PF00860 Permease family FFE93_RS01735 PF00999 Sodium/hydrogen exchanger family FFE93_RS01745 PF00196 Bacterial regulatory proteins, luxR family FFE93_RS01745 PF00072 Response regulator receiver domain FFE93_RS01750 PF00005 ABC transporter FFE93_RS01755 PF00528 Binding-protein-dependent transport system inner membrane component FFE93_RS01760 PF00528 Binding-protein-dependent transport system inner membrane component FFE93_RS01765 PF00497 Bacterial extracellular solute-binding proteins, family 3 FFE93_RS01770 PF03279 Bacterial lipid A biosynthesis acyltransferase FFE93_RS01780 PF00005 ABC transporter FFE93_RS01785 PF02653 Branched-chain amino acid transport system / permease component FFE93_RS01795 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FFE93_RS01795 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FFE93_RS01800 PF00571 CBS domain FFE93_RS01800 PF01380 SIS domain FFE93_RS01805 PF00939 Sodium:sulfate symporter transmembrane region FFE93_RS01810 PF00313 'Cold-shock' DNA-binding domain FFE93_RS01815 PF00313 'Cold-shock' DNA-binding domain FFE93_RS01820 PF05433 Glycine zipper 2TM domain FFE93_RS01825 PF00990 Diguanylate cyclase, GGDEF domain FFE93_RS01825 PF08448 PAS fold FFE93_RS01830 PF02954 Bacterial regulatory protein, Fis family FFE93_RS01835 PF01207 Dihydrouridine synthase (Dus) FFE93_RS01845 PF00474 Sodium:solute symporter family FFE93_RS01850 PF06196 Protein of unknown function (DUF997) FFE93_RS01855 PF00289 Biotin carboxylase, N-terminal domain FFE93_RS01855 PF02785 Biotin carboxylase C-terminal domain FFE93_RS01855 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FFE93_RS01860 PF00364 Biotin-requiring enzyme FFE93_RS01865 PF01220 Dehydroquinase class II FFE93_RS01870 PF01794 Ferric reductase like transmembrane component FFE93_RS01875 PF00174 Oxidoreductase molybdopterin binding domain FFE93_RS01880 PF08240 Alcohol dehydrogenase GroES-like domain FFE93_RS01880 PF00107 Zinc-binding dehydrogenase FFE93_RS01885 PF00563 EAL domain FFE93_RS01885 PF17157 Gammaproteobacterial periplasmic sensor domain FFE93_RS01885 PF00990 Diguanylate cyclase, GGDEF domain FFE93_RS01895 PF04085 rod shape-determining protein MreC FFE93_RS01900 PF04093 rod shape-determining protein MreD FFE93_RS01905 PF02545 Maf-like protein FFE93_RS01910 PF10150 Ribonuclease E/G family FFE93_RS01910 PF00575 S1 RNA binding domain FFE93_RS01915 PF13116 Protein of unknown function FFE93_RS01915 PF13502 AsmA-like C-terminal region FFE93_RS01920 PF00795 Carbon-nitrogen hydrolase FFE93_RS01925 PF01523 Putative modulator of DNA gyrase FFE93_RS01930 PF03466 LysR substrate binding domain FFE93_RS01930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFE93_RS01935 PF07869 Protein of unknown function (DUF1656) FFE93_RS01940 PF13533 Biotin-lipoyl like FFE93_RS01945 PF04632 Fusaric acid resistance protein family FFE93_RS01950 PF00171 Aldehyde dehydrogenase family FFE93_RS01960 PF01337 Barstar (barnase inhibitor) FFE93_RS01965 PF04751 Protein of unknown function (DUF615) FFE93_RS01970 PF00589 Phage integrase family FFE93_RS01970 PF02899 Phage integrase, N-terminal SAM-like domain FFE93_RS02005 PF02086 D12 class N6 adenine-specific DNA methyltransferase FFE93_RS02010 PF05840 Bacteriophage replication gene A protein (GPA) FFE93_RS02160 PF17482 Phage tail sheath C-terminal domain FFE93_RS02160 PF04984 Phage tail sheath protein subtilisin-like domain FFE93_RS02195 PF04606 Ogr/Delta-like zinc finger FFE93_RS02200 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) FFE93_RS02210 PF01523 Putative modulator of DNA gyrase FFE93_RS02215 PF07361 Cytochrome b562 FFE93_RS02220 PF01272 Transcription elongation factor, GreA/GreB, C-term FFE93_RS02220 PF14760 Rnk N-terminus FFE93_RS02250 PF01979 Amidohydrolase family FFE93_RS02255 PF03841 L-seryl-tRNA selenium transferase FFE93_RS02260 PF07071 KDGP aldolase FFE93_RS02265 PF00874 PRD domain FFE93_RS02265 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FFE93_RS02265 PF08279 HTH domain FFE93_RS02265 PF05043 Mga helix-turn-helix domain FFE93_RS02270 PF00690 Cation transporter/ATPase, N-terminus FFE93_RS02270 PF00689 Cation transporting ATPase, C-terminus FFE93_RS02275 PF00356 Bacterial regulatory proteins, lacI family FFE93_RS02280 PF00367 phosphotransferase system, EIIB FFE93_RS02280 PF02378 Phosphotransferase system, EIIC FFE93_RS02285 PF00128 Alpha amylase, catalytic domain FFE93_RS02285 PF11941 Domain of unknown function (DUF3459) FFE93_RS02300 PF04168 A predicted alpha-helical domain with a conserved ER motif. FFE93_RS02300 PF14403 Circularly permuted ATP-grasp type 2 FFE93_RS02305 PF14403 Circularly permuted ATP-grasp type 2 FFE93_RS02310 PF01042 Endoribonuclease L-PSP FFE93_RS02315 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain FFE93_RS02315 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain FFE93_RS02320 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FFE93_RS02320 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FFE93_RS02325 PF00381 PTS HPr component phosphorylation site FFE93_RS02330 PF03668 P-loop ATPase protein family FFE93_RS02335 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FFE93_RS02340 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FFE93_RS02345 PF00309 Sigma-54 factor, Activator interacting domain (AID) FFE93_RS02345 PF04963 Sigma-54 factor, core binding domain FFE93_RS02345 PF04552 Sigma-54, DNA binding domain FFE93_RS02350 PF12399 Branched-chain amino acid ATP-binding cassette transporter FFE93_RS02350 PF00005 ABC transporter FFE93_RS02355 PF03968 OstA-like protein FFE93_RS02360 PF06835 Lipopolysaccharide-assembly, LptC-related FFE93_RS02370 PF01380 SIS domain FFE93_RS02370 PF00571 CBS domain FFE93_RS02375 PF01699 Sodium/calcium exchanger protein FFE93_RS02380 PF00005 ABC transporter FFE93_RS02385 PF02405 Permease MlaE FFE93_RS02390 PF02470 MlaD protein FFE93_RS02395 PF05494 MlaC protein FFE93_RS02400 PF13466 STAS domain FFE93_RS02405 PF01722 BolA-like protein FFE93_RS02410 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FFE93_RS02415 PF13180 PDZ domain FFE93_RS02420 PF00595 PDZ domain FFE93_RS02420 PF13180 PDZ domain FFE93_RS02425 PF06295 Protein of unknown function (DUF1043) FFE93_RS02430 PF03969 AFG1-like ATPase FFE93_RS02435 PF00572 Ribosomal protein L13 FFE93_RS02440 PF00380 Ribosomal protein S9/S16 FFE93_RS02450 PF00043 Glutathione S-transferase, C-terminal domain FFE93_RS02450 PF02798 Glutathione S-transferase, N-terminal domain FFE93_RS02455 PF04386 Stringent starvation protein B FFE93_RS02470 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FFE93_RS02470 PF07992 Pyridine nucleotide-disulphide oxidoreductase FFE93_RS02475 PF00310 Glutamine amidotransferases class-II FFE93_RS02475 PF04898 Glutamate synthase central domain FFE93_RS02475 PF01645 Conserved region in glutamate synthase FFE93_RS02475 PF01493 GXGXG motif FFE93_RS02480 PF04055 Radical SAM superfamily FFE93_RS02480 PF16199 Radical_SAM C-terminal domain FFE93_RS02485 PF18415 Histidine kinase receptor ArcB trans-membrane domain FFE93_RS02485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFE93_RS02485 PF00989 PAS fold FFE93_RS02485 PF01627 Hpt domain FFE93_RS02485 PF00072 Response regulator receiver domain FFE93_RS02485 PF00512 His Kinase A (phospho-acceptor) domain FFE93_RS02500 PF00912 Transglycosylase FFE93_RS02505 PF04972 BON domain FFE93_RS02510 PF13580 SIS domain FFE93_RS02515 PF02021 Uncharacterised protein family UPF0102 FFE93_RS02520 PF04348 LppC putative lipoprotein FFE93_RS02525 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FFE93_RS02535 PF13599 Pentapeptide repeats (9 copies) FFE93_RS02565 PF08240 Alcohol dehydrogenase GroES-like domain FFE93_RS02565 PF00107 Zinc-binding dehydrogenase FFE93_RS02570 PF02678 Pirin FFE93_RS02570 PF17954 Quercetinase C-terminal cupin domain FFE93_RS02575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFE93_RS02575 PF03466 LysR substrate binding domain FFE93_RS02580 PF13409 Glutathione S-transferase, N-terminal domain FFE93_RS02585 PF07681 DoxX FFE93_RS02590 PF13997 YqjK-like protein FFE93_RS02595 PF07332 Putative Actinobacterial Holin-X, holin superfamily III FFE93_RS02600 PF05957 Bacterial protein of unknown function (DUF883) FFE93_RS02610 PF13721 SecD export protein N-terminal TM region FFE93_RS02615 PF09335 SNARE associated Golgi protein FFE93_RS02625 PF07729 FCD domain FFE93_RS02625 PF00392 Bacterial regulatory proteins, gntR family FFE93_RS02630 PF07690 Major Facilitator Superfamily FFE93_RS02635 PF02614 Glucuronate isomerase FFE93_RS02640 PF08125 Mannitol dehydrogenase C-terminal domain FFE93_RS02640 PF01232 Mannitol dehydrogenase Rossmann domain FFE93_RS02645 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus FFE93_RS02645 PF08666 SAF domain FFE93_RS02650 PF10688 Bacterial inner membrane protein FFE93_RS02655 PF00375 Sodium:dicarboxylate symporter family FFE93_RS02660 PF03741 Integral membrane protein TerC family FFE93_RS02665 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FFE93_RS02670 PF01863 Protein of unknown function DUF45 FFE93_RS02675 PF12951 Passenger-associated-transport-repeat FFE93_RS02675 PF03797 Autotransporter beta-domain FFE93_RS02680 PF05175 Methyltransferase small domain FFE93_RS02685 PF03797 Autotransporter beta-domain FFE93_RS02690 PF07992 Pyridine nucleotide-disulphide oxidoreductase FFE93_RS02690 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FFE93_RS02695 PF03729 Short repeat of unknown function (DUF308) FFE93_RS02730 PF00460 Flagella basal body rod protein FFE93_RS02735 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FFE93_RS02735 PF00460 Flagella basal body rod protein FFE93_RS02740 PF13861 FlgD Tudor-like domain FFE93_RS02740 PF13860 FlgD Ig-like domain FFE93_RS02740 PF03963 Flagellar hook capping protein - N-terminal region FFE93_RS02745 PF07559 Flagellar basal body protein FlaE FFE93_RS02745 PF00460 Flagella basal body rod protein FFE93_RS02745 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FFE93_RS02750 PF00460 Flagella basal body rod protein FFE93_RS02750 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FFE93_RS02755 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FFE93_RS02755 PF00460 Flagella basal body rod protein FFE93_RS02760 PF02107 Flagellar L-ring protein FFE93_RS02765 PF02119 Flagellar P-ring protein FFE93_RS02770 PF10135 Rod binding protein FFE93_RS02770 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase FFE93_RS02775 PF00460 Flagella basal body rod protein FFE93_RS02775 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FFE93_RS02780 PF00669 Bacterial flagellin N-terminal helical region FFE93_RS02785 PF00672 HAMP domain FFE93_RS02785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FFE93_RS02785 PF02203 Tar ligand binding domain homologue FFE93_RS02790 PF04539 Sigma-70 region 3 FFE93_RS02790 PF04545 Sigma-70, region 4 FFE93_RS02790 PF04542 Sigma-70 region 2 FFE93_RS02795 PF05247 Flagellar transcriptional activator (FlhD) FFE93_RS02800 PF05280 Flagellar transcriptional activator (FlhC) FFE93_RS02805 PF01618 MotA/TolQ/ExbB proton channel family FFE93_RS02810 PF13677 Membrane MotB of proton-channel complex MotA/MotB FFE93_RS02810 PF00691 OmpA family FFE93_RS02815 PF02895 Signal transducing histidine kinase, homodimeric domain FFE93_RS02815 PF01584 CheW-like domain FFE93_RS02815 PF09078 CheY binding FFE93_RS02815 PF01627 Hpt domain FFE93_RS02815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFE93_RS02820 PF01584 CheW-like domain FFE93_RS02825 PF00672 HAMP domain FFE93_RS02825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FFE93_RS02825 PF02203 Tar ligand binding domain homologue FFE93_RS02835 PF00700 Bacterial flagellin C-terminal helical region FFE93_RS02835 PF08884 Flagellin D3 domain FFE93_RS02835 PF00669 Bacterial flagellin N-terminal helical region FFE93_RS02840 PF07195 Flagellar hook-associated protein 2 C-terminus FFE93_RS02840 PF02465 Flagellar hook-associated protein 2 N-terminus FFE93_RS02840 PF07196 Flagellin hook IN motif FFE93_RS02845 PF02561 Flagellar protein FliS FFE93_RS02850 PF05400 Flagellar protein FliT FFE93_RS02855 PF06366 Flagellar protein FlhE FFE93_RS02860 PF00771 FHIPEP family FFE93_RS02865 PF01312 FlhB HrpN YscU SpaS Family FFE93_RS02870 PF04344 Chemotaxis phosphatase, CheZ FFE93_RS02875 PF00072 Response regulator receiver domain FFE93_RS02880 PF00072 Response regulator receiver domain FFE93_RS02880 PF01339 CheB methylesterase FFE93_RS02885 PF03705 CheR methyltransferase, all-alpha domain FFE93_RS02885 PF01739 CheR methyltransferase, SAM binding domain FFE93_RS02890 PF02049 Flagellar hook-basal body complex protein FliE FFE93_RS02895 PF01514 Secretory protein of YscJ/FliF family FFE93_RS02895 PF08345 Flagellar M-ring protein C-terminal FFE93_RS02900 PF01706 FliG C-terminal domain FFE93_RS02900 PF14842 FliG N-terminal domain FFE93_RS02900 PF14841 FliG middle domain FFE93_RS02910 PF18269 T3SS EscN ATPase C-terminal domain FFE93_RS02910 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FFE93_RS02915 PF02050 Flagellar FliJ protein FFE93_RS02920 PF02120 Flagellar hook-length control protein FliK FFE93_RS02925 PF03748 Flagellar basal body-associated protein FliL FFE93_RS02930 PF02154 Flagellar motor switch protein FliM FFE93_RS02930 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FFE93_RS02935 PF16973 Flagellar motor switch protein FliN N-terminal FFE93_RS02935 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FFE93_RS02940 PF04347 Flagellar biosynthesis protein, FliO FFE93_RS02945 PF00813 FliP family FFE93_RS02950 PF01313 Bacterial export proteins, family 3 FFE93_RS02955 PF01311 Bacterial export proteins, family 1 FFE93_RS02960 PF00072 Response regulator receiver domain FFE93_RS02960 PF00196 Bacterial regulatory proteins, luxR family FFE93_RS02965 PF00672 HAMP domain FFE93_RS02965 PF02203 Tar ligand binding domain homologue FFE93_RS02965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FFE93_RS02975 PF04546 Sigma-70, non-essential region FFE93_RS02975 PF04542 Sigma-70 region 2 FFE93_RS02975 PF04539 Sigma-70 region 3 FFE93_RS02975 PF03979 Sigma-70 factor, region 1.1 FFE93_RS02975 PF04545 Sigma-70, region 4 FFE93_RS02975 PF00140 Sigma-70 factor, region 1.2 FFE93_RS02980 PF01807 CHC2 zinc finger FFE93_RS02980 PF08275 DNA primase catalytic core, N-terminal domain FFE93_RS02980 PF08278 DNA primase DnaG DnaB-binding FFE93_RS02980 PF10410 DnaB-helicase binding domain of primase FFE93_RS02985 PF01165 Ribosomal protein S21 FFE93_RS02990 PF00814 Glycoprotease family FFE93_RS02995 PF02660 Glycerol-3-phosphate acyltransferase FFE93_RS03000 PF02152 Dihydroneopterin aldolase FFE93_RS03005 PF02673 Bacitracin resistance protein BacA FFE93_RS03010 PF12627 Probable RNA and SrmB- binding site of polymerase A FFE93_RS03010 PF01743 Poly A polymerase head domain FFE93_RS03010 PF01966 HD domain FFE93_RS03015 PF08239 Bacterial SH3 domain FFE93_RS03020 PF01928 CYTH domain FFE93_RS03025 PF08335 GlnD PII-uridylyltransferase FFE93_RS03025 PF03710 Glutamate-ammonia ligase adenylyltransferase FFE93_RS03030 PF01467 Cytidylyltransferase-like FFE93_RS03030 PF00294 pfkB family carbohydrate kinase FFE93_RS03035 PF13520 Amino acid permease FFE93_RS03040 PF04380 Membrane fusogenic activity FFE93_RS03045 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FFE93_RS03050 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase FFE93_RS03055 PF03738 Glutathionylspermidine synthase preATP-grasp FFE93_RS03060 PF06693 Protein of unknown function (DUF1190) FFE93_RS03065 PF02321 Outer membrane efflux protein FFE93_RS03070 PF00293 NUDIX domain FFE93_RS03075 PF06853 Protein of unknown function (DUF1249) FFE93_RS03080 PF00149 Calcineurin-like phosphoesterase FFE93_RS03085 PF05728 Uncharacterised protein family (UPF0227) FFE93_RS03090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFE93_RS03090 PF01751 Toprim domain FFE93_RS03090 PF00204 DNA gyrase B FFE93_RS03090 PF00986 DNA gyrase B subunit, carboxyl terminus FFE93_RS03095 PF03466 LysR substrate binding domain FFE93_RS03095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFE93_RS03100 PF03992 Antibiotic biosynthesis monooxygenase FFE93_RS03105 PF02525 Flavodoxin-like fold FFE93_RS03115 PF03989 DNA gyrase C-terminal domain, beta-propeller FFE93_RS03115 PF00521 DNA gyrase/topoisomerase IV, subunit A FFE93_RS03120 PF01553 Acyltransferase FFE93_RS03125 PF07731 Multicopper oxidase FFE93_RS03125 PF07732 Multicopper oxidase FFE93_RS03130 PF04055 Radical SAM superfamily FFE93_RS03130 PF11842 Domain of unknown function (DUF3362) FFE93_RS03130 PF08497 Radical SAM N-terminal FFE93_RS03135 PF00248 Aldo/keto reductase family FFE93_RS03140 PF00465 Iron-containing alcohol dehydrogenase FFE93_RS03145 PF12833 Helix-turn-helix domain FFE93_RS03145 PF06719 AraC-type transcriptional regulator N-terminus FFE93_RS03150 PF09335 SNARE associated Golgi protein FFE93_RS03155 PF01053 Cys/Met metabolism PLP-dependent enzyme FFE93_RS03160 PF01618 MotA/TolQ/ExbB proton channel family FFE93_RS03165 PF02472 Biopolymer transport protein ExbD/TolR FFE93_RS03200 PF00437 Type II/IV secretion system protein FFE93_RS03215 PF04972 BON domain FFE93_RS03215 PF00263 Bacterial type II and III secretion system protein FFE93_RS03215 PF13629 Pilus formation protein N terminal region FFE93_RS03240 PF00873 AcrB/AcrD/AcrF family FFE93_RS03245 PF00529 HlyD membrane-fusion protein of T1SS FFE93_RS03245 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FFE93_RS03265 PF11806 Domain of unknown function (DUF3327) FFE93_RS03265 PF00756 Putative esterase FFE93_RS03270 PF00005 ABC transporter FFE93_RS03275 PF01032 FecCD transport family FFE93_RS03280 PF01032 FecCD transport family FFE93_RS03285 PF01497 Periplasmic binding protein FFE93_RS03290 PF04542 Sigma-70 region 2 FFE93_RS03290 PF08281 Sigma-70, region 4 FFE93_RS03295 PF04773 FecR protein FFE93_RS03295 PF16220 Domain of unknown function (DUF4880) FFE93_RS03300 PF07715 TonB-dependent Receptor Plug Domain FFE93_RS03305 PF00675 Insulinase (Peptidase family M16) FFE93_RS03305 PF05193 Peptidase M16 inactive domain FFE93_RS03310 PF00005 ABC transporter FFE93_RS03310 PF06472 ABC transporter transmembrane region 2 FFE93_RS03315 PF00672 HAMP domain FFE93_RS03315 PF02203 Tar ligand binding domain homologue FFE93_RS03315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FFE93_RS03325 PF00771 FHIPEP family FFE93_RS03330 PF13677 Membrane MotB of proton-channel complex MotA/MotB FFE93_RS03330 PF00691 OmpA family FFE93_RS03335 PF05433 Glycine zipper 2TM domain FFE93_RS03340 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal FFE93_RS03340 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FFE93_RS03345 PF13247 4Fe-4S dicluster domain FFE93_RS03350 PF03916 Polysulphide reductase, NrfD FFE93_RS03355 PF00374 Nickel-dependent hydrogenase FFE93_RS03360 PF01750 Hydrogenase maturation protease FFE93_RS03365 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE FFE93_RS03370 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA FFE93_RS03375 PF02492 CobW/HypB/UreG, nucleotide-binding domain FFE93_RS03380 PF01455 HupF/HypC family FFE93_RS03385 PF01924 Hydrogenase formation hypA family FFE93_RS03390 PF00586 AIR synthase related protein, N-terminal domain FFE93_RS03390 PF02769 AIR synthase related protein, C-terminal domain FFE93_RS03395 PF07503 HypF finger FFE93_RS03395 PF01300 Telomere recombination FFE93_RS03395 PF17788 HypF Kae1-like domain FFE93_RS03395 PF00708 Acylphosphatase FFE93_RS03400 PF00563 EAL domain FFE93_RS03400 PF08448 PAS fold FFE93_RS03400 PF08447 PAS fold FFE93_RS03400 PF00990 Diguanylate cyclase, GGDEF domain FFE93_RS03410 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FFE93_RS03410 PF00529 HlyD membrane-fusion protein of T1SS FFE93_RS03415 PF00873 AcrB/AcrD/AcrF family FFE93_RS03420 PF08946 Osmosensory transporter coiled coil FFE93_RS03420 PF00083 Sugar (and other) transporter FFE93_RS03430 PF02690 Na+/Pi-cotransporter FFE93_RS03435 PF01156 Inosine-uridine preferring nucleoside hydrolase FFE93_RS03440 PF00356 Bacterial regulatory proteins, lacI family FFE93_RS03450 PF01497 Periplasmic binding protein FFE93_RS03455 PF01032 FecCD transport family FFE93_RS03460 PF01032 FecCD transport family FFE93_RS03465 PF00005 ABC transporter FFE93_RS03470 PF00557 Metallopeptidase family M24 FFE93_RS03480 PF17287 POTRA domain FFE93_RS03480 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB FFE93_RS03480 PF08479 POTRA domain, ShlB-type FFE93_RS03560 PF00529 HlyD membrane-fusion protein of T1SS FFE93_RS03560 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FFE93_RS03565 PF04632 Fusaric acid resistance protein family FFE93_RS03575 PF00484 Carbonic anhydrase FFE93_RS03615 PF17871 AAA lid domain FFE93_RS03615 PF00004 ATPase family associated with various cellular activities (AAA) FFE93_RS03615 PF07724 AAA domain (Cdc48 subfamily) FFE93_RS03615 PF10431 C-terminal, D2-small domain, of ClpB protein FFE93_RS03625 PF05947 Type VI secretion system, TssF FFE93_RS03645 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath FFE93_RS03650 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 FFE93_RS03655 PF06812 ImpA, N-terminal, type VI secretion system FFE93_RS03660 PF14331 ImcF-related N-terminal domain FFE93_RS03660 PF06761 Intracellular multiplication and human macrophage-killing FFE93_RS03660 PF06744 Type VI secretion protein IcmF C-terminal FFE93_RS03665 PF13677 Membrane MotB of proton-channel complex MotA/MotB FFE93_RS03665 PF00691 OmpA family FFE93_RS03670 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE FFE93_RS03700 PF06715 Gp5 C-terminal repeat (3 copies) FFE93_RS03700 PF04717 Type VI secretion system, phage-baseplate injector FFE93_RS03725 PF00196 Bacterial regulatory proteins, luxR family FFE93_RS03725 PF03472 Autoinducer binding domain FFE93_RS03735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFE93_RS03735 PF03466 LysR substrate binding domain FFE93_RS03745 PF02369 Bacterial Ig-like domain (group 1) FFE93_RS03745 PF09134 Invasin, domain 3 FFE93_RS03745 PF11924 Inverse autotransporter, beta-domain FFE93_RS03770 PF00230 Major intrinsic protein FFE93_RS03775 PF00589 Phage integrase family FFE93_RS03790 PF00419 Fimbrial protein FFE93_RS03795 PF13954 PapC N-terminal domain FFE93_RS03795 PF13953 PapC C-terminal domain FFE93_RS03795 PF00577 Outer membrane usher protein FFE93_RS03800 PF02753 Pili assembly chaperone PapD, C-terminal domain FFE93_RS03800 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FFE93_RS03810 PF00419 Fimbrial protein FFE93_RS03820 PF08240 Alcohol dehydrogenase GroES-like domain FFE93_RS03820 PF00107 Zinc-binding dehydrogenase FFE93_RS03825 PF03466 LysR substrate binding domain FFE93_RS03825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFE93_RS03880 PF01276 Orn/Lys/Arg decarboxylase, major domain FFE93_RS03880 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain FFE93_RS03880 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain FFE93_RS03890 PF01464 Transglycosylase SLT domain FFE93_RS03890 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain FFE93_RS03895 PF04362 Bacterial Fe(2+) trafficking FFE93_RS03900 PF00633 Helix-hairpin-helix motif FFE93_RS03900 PF10576 Iron-sulfur binding domain of endonuclease III FFE93_RS03900 PF14815 NUDIX domain FFE93_RS03900 PF00730 HhH-GPD superfamily base excision DNA repair protein FFE93_RS03905 PF02390 Putative methyltransferase FFE93_RS03910 PF04320 Protein with unknown function (DUF469) FFE93_RS03920 PF04606 Ogr/Delta-like zinc finger FFE93_RS03965 PF02796 Helix-turn-helix domain of resolvase FFE93_RS03965 PF00239 Resolvase, N terminal domain FFE93_RS03970 PF02413 Caudovirales tail fibre assembly protein, lambda gpK FFE93_RS04005 PF02661 Fic/DOC family FFE93_RS04005 PF18543 Intracellular delivery domain FFE93_RS04100 PF02086 D12 class N6 adenine-specific DNA methyltransferase FFE93_RS04140 PF00589 Phage integrase family FFE93_RS04140 PF02899 Phage integrase, N-terminal SAM-like domain FFE93_RS04145 PF04960 Glutaminase FFE93_RS04150 PF11101 Protein of unknown function (DUF2884) FFE93_RS04155 PF04055 Radical SAM superfamily FFE93_RS04155 PF06969 HemN C-terminal domain FFE93_RS04160 PF01725 Ham1 family FFE93_RS04165 PF02594 Uncharacterised ACR, YggU family COG1872 FFE93_RS04170 PF02325 YGGT family FFE93_RS04175 PF14748 Pyrroline-5-carboxylate reductase dimerisation FFE93_RS04175 PF03807 NADP oxidoreductase coenzyme F420-dependent FFE93_RS04180 PF01168 Alanine racemase, N-terminal domain FFE93_RS04185 PF00437 Type II/IV secretion system protein FFE93_RS04190 PF04371 Porphyromonas-type peptidyl-arginine deiminase FFE93_RS04195 PF00795 Carbon-nitrogen hydrolase FFE93_RS04200 PF03652 Holliday junction resolvase FFE93_RS04205 PF02622 Uncharacterized ACR, COG1678 FFE93_RS04210 PF02951 Prokaryotic glutathione synthetase, N-terminal domain FFE93_RS04210 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain FFE93_RS04215 PF04452 RNA methyltransferase FFE93_RS04220 PF04231 Endonuclease I FFE93_RS04225 PF17283 SprT-like zinc ribbon domain FFE93_RS04225 PF10263 SprT-like family FFE93_RS04235 PF02773 S-adenosylmethionine synthetase, C-terminal domain FFE93_RS04235 PF00438 S-adenosylmethionine synthetase, N-terminal domain FFE93_RS04235 PF02772 S-adenosylmethionine synthetase, central domain FFE93_RS04240 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FFE93_RS04240 PF17810 Arginine decarboxylase helical bundle domain FFE93_RS04240 PF17944 Arginine decarboxylase C-terminal helical extension FFE93_RS04245 PF00355 Rieske [2Fe-2S] domain FFE93_RS04250 PF01435 Peptidase family M48 FFE93_RS04255 PF02779 Transketolase, pyrimidine binding domain FFE93_RS04255 PF02780 Transketolase, C-terminal domain FFE93_RS04255 PF00456 Transketolase, thiamine diphosphate binding domain FFE93_RS04265 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FFE93_RS04265 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FFE93_RS04270 PF00162 Phosphoglycerate kinase FFE93_RS04275 PF01116 Fructose-bisphosphate aldolase class-II FFE93_RS04280 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) FFE93_RS04285 PF05552 Conserved TM helix FFE93_RS04285 PF00924 Mechanosensitive ion channel FFE93_RS04290 PF01810 LysE type translocator FFE93_RS04295 PF04402 Protein of unknown function (DUF541) FFE93_RS04300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFE93_RS04300 PF03466 LysR substrate binding domain FFE93_RS04305 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) FFE93_RS04310 PF01842 ACT domain FFE93_RS04310 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FFE93_RS04310 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FFE93_RS04315 PF01812 5-formyltetrahydrofolate cyclo-ligase family FFE93_RS04325 PF05164 Cell division protein ZapA FFE93_RS04330 PF03695 Uncharacterised protein family (UPF0149) FFE93_RS04335 PF00557 Metallopeptidase family M24 FFE93_RS04335 PF05195 Aminopeptidase P, N-terminal domain FFE93_RS04340 PF01494 FAD binding domain FFE93_RS04345 PF01494 FAD binding domain FFE93_RS04350 PF08669 Glycine cleavage T-protein C-terminal barrel domain FFE93_RS04350 PF01571 Aminomethyltransferase folate-binding domain FFE93_RS04355 PF01597 Glycine cleavage H-protein FFE93_RS04360 PF02347 Glycine cleavage system P-protein FFE93_RS04365 PF03006 Haemolysin-III related FFE93_RS04370 PF01571 Aminomethyltransferase folate-binding domain FFE93_RS04375 PF03937 Flavinator of succinate dehydrogenase FFE93_RS04380 PF07254 Membrane-bound toxin component of toxin-antitoxin system FFE93_RS04385 PF00486 Transcriptional regulatory protein, C terminal FFE93_RS04385 PF00072 Response regulator receiver domain FFE93_RS04390 PF00512 His Kinase A (phospho-acceptor) domain FFE93_RS04390 PF00672 HAMP domain FFE93_RS04390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFE93_RS04395 PF06123 Inner membrane protein CreD FFE93_RS04400 PF00258 Flavodoxin FFE93_RS04405 PF02899 Phage integrase, N-terminal SAM-like domain FFE93_RS04405 PF00589 Phage integrase family FFE93_RS04410 PF13098 Thioredoxin-like domain FFE93_RS04410 PF10411 Disulfide bond isomerase protein N-terminus FFE93_RS04415 PF17768 RecJ OB domain FFE93_RS04415 PF02272 DHHA1 domain FFE93_RS04415 PF01368 DHH family FFE93_RS04425 PF00152 tRNA synthetases class II (D, K and N) FFE93_RS04425 PF01336 OB-fold nucleic acid binding domain FFE93_RS04440 PF01061 ABC-2 type transporter FFE93_RS04445 PF00005 ABC transporter FFE93_RS04450 PF17101 Stealth protein CR1, conserved region 1 FFE93_RS04450 PF11380 Stealth protein CR2, conserved region 2 FFE93_RS04455 PF00535 Glycosyl transferase family 2 FFE93_RS04455 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase FFE93_RS04460 PF05159 Capsule polysaccharide biosynthesis protein FFE93_RS04465 PF05159 Capsule polysaccharide biosynthesis protein FFE93_RS04470 PF02563 Polysaccharide biosynthesis/export protein FFE93_RS04470 PF10531 SLBB domain FFE93_RS04480 PF00990 Diguanylate cyclase, GGDEF domain FFE93_RS04480 PF08448 PAS fold FFE93_RS04485 PF01037 Lrp/AsnC ligand binding domain FFE93_RS04495 PF16338 Domain of unknown function (DUF4968) FFE93_RS04495 PF01055 Glycosyl hydrolases family 31 FFE93_RS04495 PF13802 Galactose mutarotase-like FFE93_RS04495 PF17137 Domain of unknown function (DUF5110) FFE93_RS04500 PF07690 Major Facilitator Superfamily FFE93_RS04510 PF01556 DnaJ C terminal domain FFE93_RS04510 PF00226 DnaJ domain FFE93_RS04525 PF01638 HxlR-like helix-turn-helix FFE93_RS04540 PF00263 Bacterial type II and III secretion system protein FFE93_RS04540 PF03958 Bacterial type II/III secretion system short domain FFE93_RS04545 PF00437 Type II/IV secretion system protein FFE93_RS04550 PF00482 Type II secretion system (T2SS), protein F FFE93_RS04555 PF07963 Prokaryotic N-terminal methylation motif FFE93_RS04555 PF08334 Type II secretion system (T2SS), protein G FFE93_RS04560 PF02501 Type II secretion system (T2SS), protein I FFE93_RS04560 PF07963 Prokaryotic N-terminal methylation motif FFE93_RS04565 PF11612 Type II secretion system (T2SS), protein J FFE93_RS04565 PF07963 Prokaryotic N-terminal methylation motif FFE93_RS04575 PF05134 Type II secretion system (T2SS), protein L FFE93_RS04575 PF12693 GspL periplasmic domain FFE93_RS04585 PF01478 Type IV leader peptidase family FFE93_RS04585 PF06750 Bacterial Peptidase A24 N-terminal domain FFE93_RS04615 PF03466 LysR substrate binding domain FFE93_RS04615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFE93_RS04620 PF07690 Major Facilitator Superfamily FFE93_RS04625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFE93_RS04625 PF03466 LysR substrate binding domain FFE93_RS04630 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FFE93_RS04630 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FFE93_RS04635 PF00356 Bacterial regulatory proteins, lacI family FFE93_RS04640 PF00384 Molybdopterin oxidoreductase FFE93_RS04640 PF01568 Molydopterin dinucleotide binding domain FFE93_RS04645 PF01553 Acyltransferase FFE93_RS04645 PF00501 AMP-binding enzyme FFE93_RS04645 PF13193 AMP-binding enzyme C-terminal domain FFE93_RS04650 PF07690 Major Facilitator Superfamily FFE93_RS04660 PF00248 Aldo/keto reductase family FFE93_RS04665 PF03741 Integral membrane protein TerC family FFE93_RS04670 PF02976 DNA mismatch repair enzyme MutH FFE93_RS04680 PF00293 NUDIX domain FFE93_RS04685 PF01590 GAF domain FFE93_RS04685 PF00391 PEP-utilising enzyme, mobile domain FFE93_RS04685 PF02896 PEP-utilising enzyme, TIM barrel domain FFE93_RS04685 PF05524 PEP-utilising enzyme, N-terminal FFE93_RS04690 PF01790 Prolipoprotein diacylglyceryl transferase FFE93_RS04695 PF00303 Thymidylate synthase FFE93_RS04700 PF07963 Prokaryotic N-terminal methylation motif FFE93_RS04700 PF00114 Pilin (bacterial filament) FFE93_RS04720 PF17946 RecC C-terminal domain FFE93_RS04725 PF16187 Middle or third domain of peptidase_M16 FFE93_RS04725 PF05193 Peptidase M16 inactive domain FFE93_RS04725 PF00675 Insulinase (Peptidase family M16) FFE93_RS04730 PF12705 PD-(D/E)XK nuclease superfamily FFE93_RS04730 PF00580 UvrD/REP helicase N-terminal domain FFE93_RS04730 PF13361 UvrD-like helicase C-terminal domain FFE93_RS04735 PF13538 UvrD-like helicase C-terminal domain FFE93_RS04740 PF00696 Amino acid kinase family FFE93_RS04740 PF00583 Acetyltransferase (GNAT) family FFE93_RS04745 PF11741 AMIN domain FFE93_RS04745 PF01520 N-acetylmuramoyl-L-alanine amidase FFE93_RS04765 PF03562 MltA specific insert domain FFE93_RS04765 PF06725 3D domain FFE93_RS04770 PF00899 ThiF family FFE93_RS04775 PF02657 Fe-S metabolism associated domain FFE93_RS04780 PF00266 Aminotransferase class-V FFE93_RS04785 PF06004 Bacterial protein of unknown function (DUF903) FFE93_RS04790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFE93_RS04790 PF03466 LysR substrate binding domain FFE93_RS04795 PF04241 Protein of unknown function (DUF423) FFE93_RS04800 PF18125 RlmM ferredoxin-like domain FFE93_RS04800 PF01728 FtsJ-like methyltransferase FFE93_RS04805 PF01367 5'-3' exonuclease, C-terminal SAM fold FFE93_RS04805 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FFE93_RS04810 PF11892 Domain of unknown function (DUF3412) FFE93_RS04810 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases FFE93_RS04810 PF03641 Possible lysine decarboxylase FFE93_RS04815 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term FFE93_RS04815 PF14489 QueF-like protein FFE93_RS04820 PF07348 Syd protein (SUKH-2) FFE93_RS04825 PF04287 tRNA pseudouridine synthase C FFE93_RS04830 PF00849 RNA pseudouridylate synthase FFE93_RS04835 PF00258 Flavodoxin FFE93_RS04845 PF11944 Protein of unknown function (DUF3461) FFE93_RS04850 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal FFE93_RS04850 PF14602 Hexapeptide repeat of succinyl-transferase FFE93_RS04850 PF00132 Bacterial transferase hexapeptide (six repeats) FFE93_RS04855 PF01966 HD domain FFE93_RS04855 PF01909 Nucleotidyltransferase domain FFE93_RS04855 PF01842 ACT domain FFE93_RS04855 PF08335 GlnD PII-uridylyltransferase FFE93_RS04860 PF00557 Metallopeptidase family M24 FFE93_RS04865 PF00318 Ribosomal protein S2 FFE93_RS04870 PF00889 Elongation factor TS FFE93_RS04875 PF00696 Amino acid kinase family FFE93_RS04880 PF01765 Ribosome recycling factor FFE93_RS04885 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain FFE93_RS04885 PF13288 DXP reductoisomerase C-terminal domain FFE93_RS04885 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase FFE93_RS04890 PF01255 Putative undecaprenyl diphosphate synthase FFE93_RS04900 PF02163 Peptidase family M50 FFE93_RS04900 PF17820 PDZ domain FFE93_RS04905 PF07244 Surface antigen variable number repeat FFE93_RS04905 PF01103 Surface antigen FFE93_RS04910 PF03938 Outer membrane protein (OmpH-like) FFE93_RS04915 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD FFE93_RS04915 PF00132 Bacterial transferase hexapeptide (six repeats) FFE93_RS04920 PF07977 FabA-like domain FFE93_RS04925 PF00132 Bacterial transferase hexapeptide (six repeats) FFE93_RS04925 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 FFE93_RS04930 PF02684 Lipid-A-disaccharide synthetase FFE93_RS04935 PF01351 Ribonuclease HII FFE93_RS04940 PF07733 Bacterial DNA polymerase III alpha NTPase domain FFE93_RS04940 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FFE93_RS04940 PF14579 Helix-hairpin-helix motif FFE93_RS04940 PF02811 PHP domain FFE93_RS04940 PF01336 OB-fold nucleic acid binding domain FFE93_RS04945 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FFE93_RS04950 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FFE93_RS04955 PF01171 PP-loop family FFE93_RS04955 PF11734 TilS substrate C-terminal domain FFE93_RS04955 PF09179 TilS substrate binding domain FFE93_RS04960 PF00034 Cytochrome c FFE93_RS04965 PF07073 Modulator of Rho-dependent transcription termination (ROF) FFE93_RS04970 PF06786 Uncharacterised protein family (UPF0253) FFE93_RS04975 PF07152 YaeQ protein FFE93_RS04980 PF00472 RF-1 domain FFE93_RS04985 PF17185 NlpE C-terminal OB domain FFE93_RS04985 PF04170 NlpE N-terminal domain FFE93_RS04990 PF04073 Aminoacyl-tRNA editing domain FFE93_RS04990 PF03129 Anticodon binding domain FFE93_RS04990 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FFE93_RS04995 PF01980 tRNA-methyltransferase O FFE93_RS04995 PF18389 TrmO C-terminal domain FFE93_RS05000 PF16358 RcsF lipoprotein FFE93_RS05005 PF03180 NLPA lipoprotein FFE93_RS05010 PF00528 Binding-protein-dependent transport system inner membrane component FFE93_RS05015 PF09383 NIL domain FFE93_RS05015 PF00005 ABC transporter FFE93_RS05050 PF00248 Aldo/keto reductase family FFE93_RS05060 PF03372 Endonuclease/Exonuclease/phosphatase family FFE93_RS05065 PF01464 Transglycosylase SLT domain FFE93_RS05065 PF01476 LysM domain FFE93_RS05070 PF16123 Hydroxyacylglutathione hydrolase C-terminus FFE93_RS05070 PF00753 Metallo-beta-lactamase superfamily FFE93_RS05075 PF08241 Methyltransferase domain FFE93_RS05080 PF00075 RNase H FFE93_RS05085 PF00929 Exonuclease FFE93_RS05095 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FFE93_RS05100 PF00528 Binding-protein-dependent transport system inner membrane component FFE93_RS05105 PF00005 ABC transporter FFE93_RS05105 PF00571 CBS domain FFE93_RS05110 PF00268 Ribonucleotide reductase, small chain FFE93_RS05115 PF02867 Ribonucleotide reductase, barrel domain FFE93_RS05115 PF00317 Ribonucleotide reductase, all-alpha domain FFE93_RS05115 PF08343 Ribonucleotide reductase N-terminal FFE93_RS05120 PF07972 NrdI Flavodoxin like FFE93_RS05125 PF00462 Glutaredoxin FFE93_RS05130 PF02627 Carboxymuconolactone decarboxylase family FFE93_RS05135 PF00155 Aminotransferase class I and II FFE93_RS05135 PF00392 Bacterial regulatory proteins, gntR family FFE93_RS05140 PF05957 Bacterial protein of unknown function (DUF883) FFE93_RS05145 PF06392 Acid shock protein repeat FFE93_RS05150 PF09400 Protein of unknown function (DUF2002) FFE93_RS05155 PF06711 Protein of unknown function (DUF1198) FFE93_RS05165 PF00313 'Cold-shock' DNA-binding domain FFE93_RS05170 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FFE93_RS05175 PF00528 Binding-protein-dependent transport system inner membrane component FFE93_RS05180 PF00528 Binding-protein-dependent transport system inner membrane component FFE93_RS05180 PF12911 N-terminal TM domain of oligopeptide transport permease C FFE93_RS05185 PF00005 ABC transporter FFE93_RS05190 PF00005 ABC transporter FFE93_RS05200 PF00547 Urease, gamma subunit FFE93_RS05205 PF00699 Urease beta subunit FFE93_RS05210 PF00449 Urease alpha-subunit, N-terminal domain FFE93_RS05210 PF01979 Amidohydrolase family FFE93_RS05215 PF02814 UreE urease accessory protein, N-terminal domain FFE93_RS05215 PF05194 UreE urease accessory protein, C-terminal domain FFE93_RS05220 PF01730 UreF FFE93_RS05225 PF02492 CobW/HypB/UreG, nucleotide-binding domain FFE93_RS05230 PF01774 UreD urease accessory protein FFE93_RS05235 PF03253 Urea transporter FFE93_RS05240 PF03824 High-affinity nickel-transport protein FFE93_RS05245 PF06411 HdeA/HdeB family FFE93_RS05250 PF07885 Ion channel FFE93_RS05250 PF02254 TrkA-N domain FFE93_RS05255 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FFE93_RS05260 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FFE93_RS05265 PF07995 Glucose / Sorbosone dehydrogenase FFE93_RS05270 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FFE93_RS05275 PF02378 Phosphotransferase system, EIIC FFE93_RS05280 PF00232 Glycosyl hydrolase family 1 FFE93_RS05285 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit FFE93_RS05290 PF07883 Cupin domain FFE93_RS05290 PF12833 Helix-turn-helix domain FFE93_RS05295 PF04794 YdjC-like protein FFE93_RS05305 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) FFE93_RS05330 PF17345 Family of unknown function (DUF5375) FFE93_RS05360 PF04606 Ogr/Delta-like zinc finger FFE93_RS05390 PF00589 Phage integrase family FFE93_RS05390 PF13356 Arm DNA-binding domain FFE93_RS05400 PF01668 SmpB protein FFE93_RS05405 PF03364 Polyketide cyclase / dehydrase and lipid transport FFE93_RS05410 PF03658 RnfH family Ubiquitin FFE93_RS05415 PF04355 SmpA / OmlA family FFE93_RS05420 PF02463 RecF/RecN/SMC N terminal domain FFE93_RS05425 PF01513 ATP-NAD kinase FFE93_RS05430 PF01025 GrpE FFE93_RS05435 PF03167 Uracil DNA glycosylase superfamily FFE93_RS05440 PF01228 Glycine radical FFE93_RS05445 PF00270 DEAD/DEAH box helicase FFE93_RS05445 PF00271 Helicase conserved C-terminal domain FFE93_RS05450 PF05175 Methyltransferase small domain FFE93_RS05455 PF00890 FAD binding domain FFE93_RS05455 PF02910 Fumarate reductase flavoprotein C-term FFE93_RS05460 PF08281 Sigma-70, region 4 FFE93_RS05460 PF04542 Sigma-70 region 2 FFE93_RS05465 PF03872 Anti sigma-E protein RseA, N-terminal domain FFE93_RS05465 PF03873 Anti sigma-E protein RseA, C-terminal domain FFE93_RS05470 PF17188 MucB/RseB C-terminal domain FFE93_RS05470 PF03888 MucB/RseB N-terminal domain FFE93_RS05485 PF06421 GTP-binding protein LepA C-terminus FFE93_RS05485 PF00679 Elongation factor G C-terminus FFE93_RS05485 PF00009 Elongation factor Tu GTP binding domain FFE93_RS05485 PF03144 Elongation factor Tu domain 2 FFE93_RS05490 PF10502 Signal peptidase, peptidase S26 FFE93_RS05495 PF14622 Ribonuclease-III-like FFE93_RS05495 PF00035 Double-stranded RNA binding motif FFE93_RS05500 PF07650 KH domain FFE93_RS05500 PF01926 50S ribosome-binding GTPase FFE93_RS05505 PF11967 Recombination protein O N terminal FFE93_RS05505 PF02565 Recombination protein O C terminal FFE93_RS05510 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ FFE93_RS05515 PF01648 4'-phosphopantetheinyl transferase superfamily FFE93_RS05520 PF12838 4Fe-4S dicluster domain FFE93_RS05525 PF01380 SIS domain FFE93_RS05525 PF01418 Helix-turn-helix domain, rpiR family FFE93_RS05530 PF01380 SIS domain FFE93_RS05535 PF00367 phosphotransferase system, EIIB FFE93_RS05535 PF02378 Phosphotransferase system, EIIC FFE93_RS05550 PF14437 MafB19-like deaminase FFE93_RS05555 PF01464 Transglycosylase SLT domain FFE93_RS05555 PF00497 Bacterial extracellular solute-binding proteins, family 3 FFE93_RS05560 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain FFE93_RS05560 PF02769 AIR synthase related protein, C-terminal domain FFE93_RS05560 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal FFE93_RS05570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFE93_RS05570 PF00512 His Kinase A (phospho-acceptor) domain FFE93_RS05575 PF13942 YfhG lipoprotein FFE93_RS05580 PF00158 Sigma-54 interaction domain FFE93_RS05580 PF00072 Response regulator receiver domain FFE93_RS05585 PF02540 NAD synthase FFE93_RS05585 PF00795 Carbon-nitrogen hydrolase FFE93_RS05590 PF00543 Nitrogen regulatory protein P-II FFE93_RS05595 PF10797 Protein of unknown function FFE93_RS05600 PF10941 Protein of unknown function DUF2620 FFE93_RS05605 PF02126 Phosphotriesterase family FFE93_RS05610 PF01168 Alanine racemase, N-terminal domain FFE93_RS05620 PF14502 Helix-turn-helix domain FFE93_RS05620 PF14503 YhfZ C-terminal domain FFE93_RS05625 PF00970 Oxidoreductase FAD-binding domain FFE93_RS05625 PF00042 Globin FFE93_RS05625 PF00175 Oxidoreductase NAD-binding domain FFE93_RS05630 PF00464 Serine hydroxymethyltransferase FFE93_RS05635 PF12832 MFS_1 like family FFE93_RS05640 PF00874 PRD domain FFE93_RS05645 PF06226 Protein of unknown function (DUF1007) FFE93_RS05650 PF03824 High-affinity nickel-transport protein FFE93_RS05655 PF00459 Inositol monophosphatase family FFE93_RS05660 PF00588 SpoU rRNA Methylase family FFE93_RS05665 PF02082 Transcriptional regulator FFE93_RS05670 PF00266 Aminotransferase class-V FFE93_RS05675 PF01592 NifU-like N terminal domain FFE93_RS05680 PF01521 Iron-sulphur cluster biosynthesis FFE93_RS05685 PF07743 HSCB C-terminal oligomerisation domain FFE93_RS05685 PF00226 DnaJ domain FFE93_RS05690 PF00012 Hsp70 protein FFE93_RS05695 PF00111 2Fe-2S iron-sulfur cluster binding domain FFE93_RS05700 PF04384 Iron-sulphur cluster assembly FFE93_RS05705 PF12404 Peptidase FFE93_RS05705 PF00883 Cytosol aminopeptidase family, catalytic domain FFE93_RS05710 PF14581 SseB protein C-terminal domain FFE93_RS05710 PF07179 SseB protein N-terminal domain FFE93_RS05715 PF03797 Autotransporter beta-domain FFE93_RS05715 PF03212 Pertactin FFE93_RS05715 PF16168 Adhesin of bacterial autotransporter system, probable stalk FFE93_RS05720 PF00207 Alpha-2-macroglobulin family FFE93_RS05720 PF07678 A-macroglobulin TED domain FFE93_RS05720 PF01835 MG2 domain FFE93_RS05720 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain FFE93_RS05720 PF11974 Bacterial alpha-2-macroglobulin MG3 domain FFE93_RS05720 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain FFE93_RS05720 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain FFE93_RS05720 PF07703 Alpha-2-macroglobulin bait region domain FFE93_RS05720 PF17962 Bacterial macroglobulin domain 6 FFE93_RS05725 PF06832 Penicillin-Binding Protein C-terminus Family FFE93_RS05725 PF00912 Transglycosylase FFE93_RS05725 PF00905 Penicillin binding protein transpeptidase domain FFE93_RS05735 PF00334 Nucleoside diphosphate kinase FFE93_RS05740 PF04055 Radical SAM superfamily FFE93_RS05750 PF13464 Domain of unknown function (DUF4115) FFE93_RS05755 PF04551 GcpE protein FFE93_RS05760 PF13393 Histidyl-tRNA synthetase FFE93_RS05760 PF03129 Anticodon binding domain FFE93_RS05765 PF09976 Tetratricopeptide repeat-like domain FFE93_RS05770 PF13360 PQQ-like domain FFE93_RS05775 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FFE93_RS05775 PF01926 50S ribosome-binding GTPase FFE93_RS05785 PF07191 zinc-ribbons FFE93_RS05790 PF13742 OB-fold nucleic acid binding domain FFE93_RS05790 PF02601 Exonuclease VII, large subunit FFE93_RS05795 PF00571 CBS domain FFE93_RS05795 PF00478 IMP dehydrogenase / GMP reductase domain FFE93_RS05800 PF02540 NAD synthase FFE93_RS05800 PF00117 Glutamine amidotransferase class-I FFE93_RS05800 PF00958 GMP synthase C terminal domain FFE93_RS05810 PF08543 Phosphomethylpyrimidine kinase FFE93_RS05825 PF01380 SIS domain FFE93_RS05825 PF00571 CBS domain FFE93_RS05830 PF08220 DeoR-like helix-turn-helix domain FFE93_RS05830 PF00455 DeoR C terminal sensor domain FFE93_RS05835 PF06923 Glucitol operon activator protein (GutM) FFE93_RS05840 PF00106 short chain dehydrogenase FFE93_RS05845 PF03829 PTS system glucitol/sorbitol-specific IIA component FFE93_RS05850 PF07663 Sorbitol phosphotransferase enzyme II C-terminus FFE93_RS05850 PF03612 Sorbitol phosphotransferase enzyme II N-terminus FFE93_RS05855 PF03608 PTS system enzyme II sorbitol-specific factor FFE93_RS05860 PF00781 Diacylglycerol kinase catalytic domain FFE93_RS05865 PF01136 Peptidase family U32 FFE93_RS05865 PF16325 Peptidase family U32 C-terminal domain FFE93_RS05870 PF07411 Domain of unknown function (DUF1508) FFE93_RS05875 PF00486 Transcriptional regulatory protein, C terminal FFE93_RS05875 PF00072 Response regulator receiver domain FFE93_RS05880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFE93_RS05880 PF00512 His Kinase A (phospho-acceptor) domain FFE93_RS05880 PF00672 HAMP domain FFE93_RS05885 PF00873 AcrB/AcrD/AcrF family FFE93_RS05890 PF00873 AcrB/AcrD/AcrF family FFE93_RS05895 PF13533 Biotin-lipoyl like FFE93_RS05900 PF00012 Hsp70 protein FFE93_RS05905 PF00563 EAL domain FFE93_RS05905 PF13426 PAS domain FFE93_RS05905 PF08448 PAS fold FFE93_RS05905 PF08447 PAS fold FFE93_RS05905 PF05231 MASE1 FFE93_RS05905 PF00990 Diguanylate cyclase, GGDEF domain FFE93_RS05910 PF03448 MgtE intracellular N domain FFE93_RS05910 PF01769 Divalent cation transporter FFE93_RS05910 PF00571 CBS domain FFE93_RS05920 PF02541 Ppx/GppA phosphatase family FFE93_RS05925 PF02503 Polyphosphate kinase middle domain FFE93_RS05925 PF13090 Polyphosphate kinase C-terminal domain 2 FFE93_RS05925 PF17941 Polyphosphate kinase C-terminal domain 1 FFE93_RS05925 PF13089 Polyphosphate kinase N-terminal domain FFE93_RS05930 PF00528 Binding-protein-dependent transport system inner membrane component FFE93_RS05935 PF00528 Binding-protein-dependent transport system inner membrane component FFE93_RS05940 PF00005 ABC transporter FFE93_RS05955 PF13302 Acetyltransferase (GNAT) domain FFE93_RS05960 PF00551 Formyl transferase FFE93_RS05965 PF00586 AIR synthase related protein, N-terminal domain FFE93_RS05965 PF02769 AIR synthase related protein, C-terminal domain FFE93_RS05975 PF00860 Permease family FFE93_RS05980 PF00308 Bacterial dnaA protein FFE93_RS05985 PF03960 ArsC family FFE93_RS05990 PF07720 Tetratricopeptide repeat FFE93_RS05990 PF01435 Peptidase family M48 FFE93_RS05995 PF01594 AI-2E family transporter FFE93_RS06000 PF00578 AhpC/TSA family FFE93_RS06005 PF01842 ACT domain FFE93_RS06010 PF00701 Dihydrodipicolinate synthetase family FFE93_RS06015 PF06804 NlpB/DapX lipoprotein FFE93_RS06020 PF01259 SAICAR synthetase FFE93_RS06025 PF04228 Putative neutral zinc metallopeptidase FFE93_RS06030 PF04284 Protein of unknown function (DUF441) FFE93_RS06035 PF13718 GNAT acetyltransferase 2 FFE93_RS06035 PF05127 Helicase FFE93_RS06035 PF17176 tRNA-binding domain FFE93_RS06040 PF02230 Phospholipase/Carboxylesterase FFE93_RS06045 PF13980 Uncharacterised protein family (UPF0370) FFE93_RS06050 PF02557 D-alanyl-D-alanine carboxypeptidase FFE93_RS06055 PF01546 Peptidase family M20/M25/M40 FFE93_RS06055 PF07687 Peptidase dimerisation domain FFE93_RS06060 PF03960 ArsC family FFE93_RS06075 PF00528 Binding-protein-dependent transport system inner membrane component FFE93_RS06080 PF08402 TOBE domain FFE93_RS06080 PF00005 ABC transporter FFE93_RS06090 PF00873 AcrB/AcrD/AcrF family FFE93_RS06100 PF00196 Bacterial regulatory proteins, luxR family FFE93_RS06100 PF00072 Response regulator receiver domain FFE93_RS06105 PF00037 4Fe-4S binding domain FFE93_RS06105 PF12800 4Fe-4S binding domain FFE93_RS06105 PF13187 4Fe-4S dicluster domain FFE93_RS06110 PF03927 NapD protein FFE93_RS06115 PF10518 TAT (twin-arginine translocation) pathway signal sequence FFE93_RS06115 PF01568 Molydopterin dinucleotide binding domain FFE93_RS06115 PF00384 Molybdopterin oxidoreductase FFE93_RS06115 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FFE93_RS06120 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) FFE93_RS06125 PF03264 NapC/NirT cytochrome c family, N-terminal region FFE93_RS06135 PF05016 ParE toxin of type II toxin-antitoxin system, parDE FFE93_RS06140 PF00293 NUDIX domain FFE93_RS06145 PF00390 Malic enzyme, N-terminal domain FFE93_RS06145 PF03949 Malic enzyme, NAD binding domain FFE93_RS06145 PF01515 Phosphate acetyl/butaryl transferase FFE93_RS06150 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 FFE93_RS06155 PF01218 Coproporphyrinogen III oxidase FFE93_RS06160 PF00583 Acetyltransferase (GNAT) family FFE93_RS06170 PF04076 Bacterial OB fold (BOF) protein FFE93_RS06175 PF06572 Protein of unknown function (DUF1131) FFE93_RS06180 PF04261 Dyp-type peroxidase family FFE93_RS06185 PF00701 Dihydrodipicolinate synthetase family FFE93_RS06190 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase FFE93_RS06195 PF00480 ROK family FFE93_RS06200 PF04074 YhcH/YjgK/YiaL FFE93_RS06205 PF01418 Helix-turn-helix domain, rpiR family FFE93_RS06205 PF01380 SIS domain FFE93_RS06210 PF07690 Major Facilitator Superfamily FFE93_RS06220 PF00528 Binding-protein-dependent transport system inner membrane component FFE93_RS06225 PF00528 Binding-protein-dependent transport system inner membrane component FFE93_RS06230 PF00005 ABC transporter FFE93_RS06235 PF00291 Pyridoxal-phosphate dependent enzyme FFE93_RS06240 PF00005 ABC transporter FFE93_RS06240 PF02687 FtsX-like permease family FFE93_RS06240 PF12704 MacB-like periplasmic core domain FFE93_RS06245 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FFE93_RS06250 PF00486 Transcriptional regulatory protein, C terminal FFE93_RS06250 PF00072 Response regulator receiver domain FFE93_RS06255 PF00512 His Kinase A (phospho-acceptor) domain FFE93_RS06255 PF16527 Two-component sensor protein CpxA, periplasmic domain FFE93_RS06255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFE93_RS06255 PF00672 HAMP domain FFE93_RS06260 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FFE93_RS06265 PF05524 PEP-utilising enzyme, N-terminal FFE93_RS06265 PF00391 PEP-utilising enzyme, mobile domain FFE93_RS06265 PF02896 PEP-utilising enzyme, TIM barrel domain FFE93_RS06270 PF00381 PTS HPr component phosphorylation site FFE93_RS06275 PF00291 Pyridoxal-phosphate dependent enzyme FFE93_RS06315 PF06183 DinI-like family FFE93_RS06335 PF04354 ZipA, C-terminal FtsZ-binding domain FFE93_RS06340 PF03119 NAD-dependent DNA ligase C4 zinc finger domain FFE93_RS06340 PF03120 NAD-dependent DNA ligase OB-fold domain FFE93_RS06340 PF01653 NAD-dependent DNA ligase adenylation domain FFE93_RS06340 PF00533 BRCA1 C Terminus (BRCT) domain FFE93_RS06340 PF12826 Helix-hairpin-helix motif FFE93_RS06345 PF12843 Putative quorum-sensing-regulated virulence factor FFE93_RS06375 PF00749 tRNA synthetases class I (E and Q), catalytic domain FFE93_RS06405 PF07670 Nucleoside recognition FFE93_RS06405 PF07662 Na+ dependent nucleoside transporter C-terminus FFE93_RS06405 PF01773 Na+ dependent nucleoside transporter N-terminus FFE93_RS06410 PF01566 Natural resistance-associated macrophage protein FFE93_RS06420 PF00248 Aldo/keto reductase family FFE93_RS06425 PF03466 LysR substrate binding domain FFE93_RS06425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFE93_RS06435 PF02685 Glucokinase FFE93_RS06440 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system FFE93_RS06450 PF07690 Major Facilitator Superfamily FFE93_RS06455 PF00072 Response regulator receiver domain FFE93_RS06455 PF04397 LytTr DNA-binding domain FFE93_RS06460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFE93_RS06460 PF06580 Histidine kinase FFE93_RS06460 PF07694 5TMR of 5TMR-LYT FFE93_RS06465 PF07350 Protein of unknown function (DUF1479) FFE93_RS06475 PF00155 Aminotransferase class I and II FFE93_RS06480 PF01292 Prokaryotic cytochrome b561 FFE93_RS06495 PF03783 Curli production assembly/transport component CsgG FFE93_RS06505 PF05643 Putative bacterial lipoprotein (DUF799) FFE93_RS06515 PF00005 ABC transporter FFE93_RS06520 PF00528 Binding-protein-dependent transport system inner membrane component FFE93_RS06530 PF13406 Transglycosylase SLT domain FFE93_RS06535 PF00324 Amino acid permease FFE93_RS06540 PF07969 Amidohydrolase family FFE93_RS06545 PF17932 Tetracyclin repressor-like, C-terminal domain FFE93_RS06545 PF00440 Bacterial regulatory proteins, tetR family FFE93_RS06550 PF07690 Major Facilitator Superfamily FFE93_RS06555 PF02405 Permease MlaE FFE93_RS06560 PF00005 ABC transporter FFE93_RS06575 PF01292 Prokaryotic cytochrome b561 FFE93_RS06580 PF04264 YceI-like domain FFE93_RS06585 PF00356 Bacterial regulatory proteins, lacI family FFE93_RS06590 PF00367 phosphotransferase system, EIIB FFE93_RS06590 PF02378 Phosphotransferase system, EIIC FFE93_RS06595 PF00232 Glycosyl hydrolase family 1 FFE93_RS06605 PF03551 Transcriptional regulator PadR-like family FFE93_RS06610 PF03831 PhnA domain FFE93_RS06610 PF08274 PhnA Zinc-Ribbon FFE93_RS06625 PF01226 Formate/nitrite transporter FFE93_RS06630 PF00005 ABC transporter FFE93_RS06635 PF03379 CcmB protein FFE93_RS06640 PF01578 Cytochrome C assembly protein FFE93_RS06645 PF04995 Heme exporter protein D (CcmD) FFE93_RS06650 PF03100 CcmE FFE93_RS06655 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal FFE93_RS06655 PF01578 Cytochrome C assembly protein FFE93_RS06660 PF08534 Redoxin FFE93_RS06665 PF03918 Cytochrome C biogenesis protein FFE93_RS06670 PF03918 Cytochrome C biogenesis protein FFE93_RS06675 PF04333 MlaA lipoprotein FFE93_RS06680 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) FFE93_RS06685 PF04175 Protein of unknown function (DUF406) FFE93_RS06690 PF00108 Thiolase, N-terminal domain FFE93_RS06690 PF02803 Thiolase, C-terminal domain FFE93_RS06695 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FFE93_RS06695 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FFE93_RS06695 PF00378 Enoyl-CoA hydratase/isomerase FFE93_RS06700 PF00300 Histidine phosphatase superfamily (branch 1) FFE93_RS06710 PF01713 Smr domain FFE93_RS06715 PF05175 Methyltransferase small domain FFE93_RS06720 PF01264 Chorismate synthase FFE93_RS06725 PF03411 Penicillin-insensitive murein endopeptidase FFE93_RS06730 PF01925 Sulfite exporter TauE/SafE FFE93_RS06735 PF04315 Elongation factor P hydroxylase FFE93_RS06740 PF08891 YfcL protein FFE93_RS06745 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FFE93_RS06745 PF01266 FAD dependent oxidoreductase FFE93_RS06750 PF00109 Beta-ketoacyl synthase, N-terminal domain FFE93_RS06750 PF02801 Beta-ketoacyl synthase, C-terminal domain FFE93_RS06755 PF00990 Diguanylate cyclase, GGDEF domain FFE93_RS06755 PF00072 Response regulator receiver domain FFE93_RS06760 PF01177 Asp/Glu/Hydantoin racemase FFE93_RS06785 PF00578 AhpC/TSA family FFE93_RS06790 PF00892 EamA-like transporter family FFE93_RS06810 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FFE93_RS06810 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FFE93_RS06810 PF11890 Domain of unknown function (DUF3410) FFE93_RS06815 PF02774 Semialdehyde dehydrogenase, dimerisation domain FFE93_RS06815 PF01118 Semialdehyde dehydrogenase, NAD binding domain FFE93_RS06820 PF01416 tRNA pseudouridine synthase FFE93_RS06825 PF09335 SNARE associated Golgi protein FFE93_RS06830 PF01039 Carboxyl transferase domain FFE93_RS06830 PF17848 Acetyl-coA carboxylase zinc finger domain FFE93_RS06835 PF02875 Mur ligase family, glutamate ligase domain FFE93_RS06835 PF08245 Mur ligase middle domain FFE93_RS06840 PF05036 Sporulation related domain FFE93_RS06845 PF02674 Colicin V production protein FFE93_RS06850 PF00156 Phosphoribosyl transferase domain FFE93_RS06855 PF02441 Flavoprotein FFE93_RS06860 PF00497 Bacterial extracellular solute-binding proteins, family 3 FFE93_RS06865 PF00528 Binding-protein-dependent transport system inner membrane component FFE93_RS06870 PF00528 Binding-protein-dependent transport system inner membrane component FFE93_RS06875 PF00005 ABC transporter FFE93_RS06885 PF01370 NAD dependent epimerase/dehydratase family FFE93_RS06885 PF08338 Domain of unknown function (DUF1731) FFE93_RS06895 PF12850 Calcineurin-like phosphoesterase superfamily domain FFE93_RS06900 PF00293 NUDIX domain FFE93_RS06910 PF10282 Lactonase, 7-bladed beta-propeller FFE93_RS06915 PF00202 Aminotransferase class-III FFE93_RS06920 PF06968 Biotin and Thiamin Synthesis associated domain FFE93_RS06920 PF04055 Radical SAM superfamily FFE93_RS06925 PF00155 Aminotransferase class I and II FFE93_RS06930 PF08241 Methyltransferase domain FFE93_RS06940 PF00005 ABC transporter FFE93_RS06945 PF17757 UvrB interaction domain FFE93_RS06945 PF00271 Helicase conserved C-terminal domain FFE93_RS06945 PF02151 UvrB/uvrC motif FFE93_RS06945 PF04851 Type III restriction enzyme, res subunit FFE93_RS06945 PF12344 Ultra-violet resistance protein B FFE93_RS06950 PF09905 DNA-binding protein VF530 FFE93_RS06955 PF01933 Uncharacterised protein family UPF0052 FFE93_RS06960 PF04055 Radical SAM superfamily FFE93_RS06960 PF06463 Molybdenum Cofactor Synthesis C FFE93_RS06965 PF01967 MoaC family FFE93_RS06970 PF02597 ThiS family FFE93_RS06975 PF02391 MoaE protein FFE93_RS06980 PF01027 Inhibitor of apoptosis-promoting Bax1 FFE93_RS06995 PF00005 ABC transporter FFE93_RS07000 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FFE93_RS07005 PF00440 Bacterial regulatory proteins, tetR family FFE93_RS07005 PF09209 Tetracyclin repressor-like, C-terminal domain FFE93_RS07010 PF00270 DEAD/DEAH box helicase FFE93_RS07010 PF00271 Helicase conserved C-terminal domain FFE93_RS07015 PF01207 Dihydrouridine synthase (Dus) FFE93_RS07030 PF00768 D-alanyl-D-alanine carboxypeptidase FFE93_RS07035 PF09330 D-lactate dehydrogenase, membrane binding FFE93_RS07035 PF01565 FAD binding domain FFE93_RS07040 PF01928 CYTH domain FFE93_RS07045 PF01844 HNH endonuclease FFE93_RS07055 PF04226 Transglycosylase associated protein FFE93_RS07060 PF00005 ABC transporter FFE93_RS07070 PF00528 Binding-protein-dependent transport system inner membrane component FFE93_RS07075 PF00528 Binding-protein-dependent transport system inner membrane component FFE93_RS07080 PF07308 Protein of unknown function (DUF1456) FFE93_RS07090 PF02653 Branched-chain amino acid transport system / permease component FFE93_RS07095 PF02653 Branched-chain amino acid transport system / permease component FFE93_RS07100 PF00005 ABC transporter FFE93_RS07105 PF00005 ABC transporter FFE93_RS07110 PF00581 Rhodanese-like domain FFE93_RS07170 PF04381 Putative exonuclease, RdgC FFE93_RS07180 PF10502 Signal peptidase, peptidase S26 FFE93_RS07200 PF03354 Phage Terminase FFE93_RS07205 PF05869 DNA N-6-adenine-methyltransferase (Dam) FFE93_RS07215 PF09669 Phage regulatory protein Rha (Phage_pRha) FFE93_RS07215 PF03374 Phage antirepressor protein KilAC domain FFE93_RS07220 PF06147 Protein of unknown function (DUF968) FFE93_RS07230 PF01555 DNA methylase FFE93_RS07240 PF00959 Phage lysozyme FFE93_RS07265 PF03354 Phage Terminase FFE93_RS07275 PF04860 Phage portal protein FFE93_RS07320 PF04984 Phage tail sheath protein subtilisin-like domain FFE93_RS07320 PF17482 Phage tail sheath C-terminal domain FFE93_RS07370 PF04865 Baseplate J-like protein FFE93_RS07375 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) FFE93_RS07400 PF00884 Sulfatase FFE93_RS07400 PF11893 Domain of unknown function (DUF3413) FFE93_RS07405 PF07208 Protein of unknown function (DUF1414) FFE93_RS07410 PF04245 37-kD nucleoid-associated bacterial protein FFE93_RS07415 PF01386 Ribosomal L25p family FFE93_RS07420 PF04851 Type III restriction enzyme, res subunit FFE93_RS07420 PF00271 Helicase conserved C-terminal domain FFE93_RS07425 PF00849 RNA pseudouridylate synthase FFE93_RS07425 PF01479 S4 domain FFE93_RS07430 PF07690 Major Facilitator Superfamily FFE93_RS07435 PF13989 YejG-like protein FFE93_RS07440 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FFE93_RS07440 PF00005 ABC transporter FFE93_RS07445 PF00528 Binding-protein-dependent transport system inner membrane component FFE93_RS07445 PF12911 N-terminal TM domain of oligopeptide transport permease C FFE93_RS07450 PF00528 Binding-protein-dependent transport system inner membrane component FFE93_RS07455 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FFE93_RS07460 PF00563 EAL domain FFE93_RS07460 PF12792 CSS motif domain associated with EAL FFE93_RS07465 PF00877 NlpC/P60 family FFE93_RS07470 PF01569 PAP2 superfamily FFE93_RS07475 PF07683 Cobalamin synthesis protein cobW C-terminal domain FFE93_RS07475 PF02492 CobW/HypB/UreG, nucleotide-binding domain FFE93_RS07485 PF07729 FCD domain FFE93_RS07485 PF00392 Bacterial regulatory proteins, gntR family FFE93_RS07490 PF08125 Mannitol dehydrogenase C-terminal domain FFE93_RS07490 PF01232 Mannitol dehydrogenase Rossmann domain FFE93_RS07500 PF03786 D-mannonate dehydratase (UxuA) FFE93_RS07505 PF08207 Elongation factor P (EF-P) KOW-like domain FFE93_RS07505 PF09285 Elongation factor P, C-terminal FFE93_RS07505 PF01132 Elongation factor P (EF-P) OB domain FFE93_RS07510 PF03222 Tryptophan/tyrosine permease family FFE93_RS07515 PF03692 Putative zinc- or iron-chelating domain FFE93_RS07520 PF18364 Molybdopterin oxidoreductase N-terminal domain FFE93_RS07520 PF00384 Molybdopterin oxidoreductase FFE93_RS07520 PF01568 Molydopterin dinucleotide binding domain FFE93_RS07525 PF03264 NapC/NirT cytochrome c family, N-terminal region FFE93_RS07530 PF00293 NUDIX domain FFE93_RS07530 PF13344 Haloacid dehalogenase-like hydrolase FFE93_RS07535 PF00381 PTS HPr component phosphorylation site FFE93_RS07535 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FFE93_RS07540 PF00294 pfkB family carbohydrate kinase FFE93_RS07545 PF02378 Phosphotransferase system, EIIC FFE93_RS07545 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FFE93_RS07550 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) FFE93_RS07555 PF01261 Xylose isomerase-like TIM barrel FFE93_RS07560 PF03601 Conserved hypothetical protein 698 FFE93_RS07570 PF03466 LysR substrate binding domain FFE93_RS07570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFE93_RS07575 PF00324 Amino acid permease FFE93_RS07590 PF07715 TonB-dependent Receptor Plug Domain FFE93_RS07590 PF00593 TonB dependent receptor FFE93_RS07595 PF13417 Glutathione S-transferase, N-terminal domain FFE93_RS07595 PF00043 Glutathione S-transferase, C-terminal domain FFE93_RS07610 PF03180 NLPA lipoprotein FFE93_RS07615 PF09383 NIL domain FFE93_RS07615 PF00005 ABC transporter FFE93_RS07620 PF00528 Binding-protein-dependent transport system inner membrane component FFE93_RS07635 PF01053 Cys/Met metabolism PLP-dependent enzyme FFE93_RS07640 PF00291 Pyridoxal-phosphate dependent enzyme FFE93_RS07640 PF00571 CBS domain FFE93_RS07645 PF00768 D-alanyl-D-alanine carboxypeptidase FFE93_RS07645 PF07943 Penicillin-binding protein 5, C-terminal domain FFE93_RS07650 PF03315 Serine dehydratase beta chain FFE93_RS07650 PF03313 Serine dehydratase alpha chain FFE93_RS07660 PF08220 DeoR-like helix-turn-helix domain FFE93_RS07660 PF00455 DeoR C terminal sensor domain FFE93_RS07665 PF01791 DeoC/LacD family aldolase FFE93_RS07670 PF01569 PAP2 superfamily FFE93_RS07685 PF13542 Helix-turn-helix domain of transposase family ISL3 FFE93_RS07685 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 FFE93_RS07685 PF01610 Transposase FFE93_RS07695 PF07022 Bacteriophage CI repressor helix-turn-helix domain FFE93_RS07695 PF16452 Bacteriophage CI repressor C-terminal domain FFE93_RS07725 PF05840 Bacteriophage replication gene A protein (GPA) FFE93_RS07735 PF04754 Putative transposase, YhgA-like FFE93_RS07775 PF06826 Predicted Permease Membrane Region FFE93_RS07775 PF02080 TrkA-C domain FFE93_RS07780 PF00462 Glutaredoxin FFE93_RS07785 PF07214 Protein of unknown function (DUF1418) FFE93_RS07795 PF10722 Putative bacterial sensory transduction regulator FFE93_RS07800 PF13416 Bacterial extracellular solute-binding protein FFE93_RS07805 PF08402 TOBE domain FFE93_RS07805 PF00005 ABC transporter FFE93_RS07810 PF00528 Binding-protein-dependent transport system inner membrane component FFE93_RS07815 PF00528 Binding-protein-dependent transport system inner membrane component FFE93_RS07820 PF10767 Protein of unknown function (DUF2593) FFE93_RS07825 PF05958 tRNA (Uracil-5-)-methyltransferase FFE93_RS07830 PF00497 Bacterial extracellular solute-binding proteins, family 3 FFE93_RS07835 PF00528 Binding-protein-dependent transport system inner membrane component FFE93_RS07840 PF00528 Binding-protein-dependent transport system inner membrane component FFE93_RS07845 PF00497 Bacterial extracellular solute-binding proteins, family 3 FFE93_RS07850 PF00005 ABC transporter FFE93_RS07855 PF01817 Chorismate mutase type II FFE93_RS07860 PF12883 Protein of unknown function (DUF3828) FFE93_RS07865 PF01370 NAD dependent epimerase/dehydratase family FFE93_RS07870 PF13460 NAD(P)H-binding FFE93_RS07870 PF11066 Protein of unknown function (DUF2867) FFE93_RS07875 PF01212 Beta-eliminating lyase FFE93_RS07880 PF04072 Leucine carboxyl methyltransferase FFE93_RS07885 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FFE93_RS07885 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FFE93_RS07885 PF00205 Thiamine pyrophosphate enzyme, central domain FFE93_RS07890 PF00111 2Fe-2S iron-sulfur cluster binding domain FFE93_RS07890 PF00175 Oxidoreductase NAD-binding domain FFE93_RS07890 PF00970 Oxidoreductase FAD-binding domain FFE93_RS07895 PF03063 Prismane/CO dehydrogenase family FFE93_RS07900 PF03956 Lysine exporter LysO FFE93_RS07905 PF11398 Protein of unknown function (DUF2813) FFE93_RS07910 PF04393 Protein of unknown function (DUF535) FFE93_RS07915 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FFE93_RS07920 PF00005 ABC transporter FFE93_RS07920 PF12704 MacB-like periplasmic core domain FFE93_RS07920 PF02687 FtsX-like permease family FFE93_RS07925 PF00313 'Cold-shock' DNA-binding domain FFE93_RS07930 PF02617 ATP-dependent Clp protease adaptor protein ClpS FFE93_RS07935 PF10431 C-terminal, D2-small domain, of ClpB protein FFE93_RS07935 PF00004 ATPase family associated with various cellular activities (AAA) FFE93_RS07935 PF17871 AAA lid domain FFE93_RS07935 PF02861 Clp amino terminal domain, pathogenicity island component FFE93_RS07935 PF07724 AAA domain (Cdc48 subfamily) FFE93_RS07940 PF01176 Translation initiation factor 1A / IF-1 FFE93_RS07945 PF03588 Leucyl/phenylalanyl-tRNA protein transferase FFE93_RS07950 PF00005 ABC transporter FFE93_RS07950 PF00664 ABC transporter transmembrane region FFE93_RS07955 PF00005 ABC transporter FFE93_RS07955 PF00664 ABC transporter transmembrane region FFE93_RS07960 PF07992 Pyridine nucleotide-disulphide oxidoreductase FFE93_RS07965 PF01037 Lrp/AsnC ligand binding domain FFE93_RS07970 PF09397 Ftsk gamma domain FFE93_RS07970 PF17854 FtsK alpha domain FFE93_RS07970 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FFE93_RS07970 PF01580 FtsK/SpoIIIE family FFE93_RS07975 PF03548 Outer membrane lipoprotein carrier protein LolA FFE93_RS07980 PF00004 ATPase family associated with various cellular activities (AAA) FFE93_RS07980 PF16193 AAA C-terminal domain FFE93_RS07980 PF12002 MgsA AAA+ ATPase C terminal FFE93_RS07985 PF02403 Seryl-tRNA synthetase N-terminal domain FFE93_RS07985 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FFE93_RS07990 PF07690 Major Facilitator Superfamily FFE93_RS07995 PF04055 Radical SAM superfamily FFE93_RS08000 PF01228 Glycine radical FFE93_RS08000 PF02901 Pyruvate formate lyase-like FFE93_RS08005 PF01226 Formate/nitrite transporter FFE93_RS08010 PF18381 YcaO cyclodehydratase C-terminal domain FFE93_RS08010 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding FFE93_RS08015 PF17763 Glutaminase/Asparaginase C-terminal domain FFE93_RS08015 PF00710 Asparaginase, N-terminal FFE93_RS08020 PF00266 Aminotransferase class-V FFE93_RS08025 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FFE93_RS08030 PF02224 Cytidylate kinase FFE93_RS08035 PF00575 S1 RNA binding domain FFE93_RS08040 PF00216 Bacterial DNA-binding protein FFE93_RS08045 PF00753 Metallo-beta-lactamase superfamily FFE93_RS08045 PF03772 Competence protein FFE93_RS08050 PF00005 ABC transporter FFE93_RS08050 PF00664 ABC transporter transmembrane region FFE93_RS08055 PF02606 Tetraacyldisaccharide-1-P 4'-kinase FFE93_RS08060 PF07063 Domain of unknown function (DUF1338) FFE93_RS08070 PF00313 'Cold-shock' DNA-binding domain FFE93_RS08075 PF03966 Trm112p-like protein FFE93_RS08080 PF02348 Cytidylyltransferase FFE93_RS08085 PF01636 Phosphotransferase enzyme family FFE93_RS08090 PF02698 DUF218 domain FFE93_RS08095 PF13847 Methyltransferase domain FFE93_RS08100 PF17193 MukF C-terminal domain FFE93_RS08100 PF17192 MukF middle domain FFE93_RS08100 PF03882 MukF winged-helix domain FFE93_RS08105 PF04288 MukE-like family FFE93_RS08110 PF16330 MukB hinge domain FFE93_RS08110 PF04310 MukB N-terminal FFE93_RS08115 PF01471 Putative peptidoglycan binding domain FFE93_RS08115 PF03734 L,D-transpeptidase catalytic domain FFE93_RS08120 PF05951 Bacterial protein of unknown function (DUF882) FFE93_RS08125 PF00753 Metallo-beta-lactamase superfamily FFE93_RS08130 PF12792 CSS motif domain associated with EAL FFE93_RS08130 PF00563 EAL domain FFE93_RS08135 PF00155 Aminotransferase class I and II FFE93_RS08140 PF00267 Gram-negative porin FFE93_RS08145 PF01336 OB-fold nucleic acid binding domain FFE93_RS08145 PF00152 tRNA synthetases class II (D, K and N) FFE93_RS08150 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family FFE93_RS08150 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain FFE93_RS08155 PF01433 Peptidase family M1 domain FFE93_RS08155 PF17432 Domain of unknown function (DUF3458_C) ARM repeats FFE93_RS08155 PF11940 Domain of unknown function (DUF3458) Ig-like fold FFE93_RS08160 PF01180 Dihydroorotate dehydrogenase FFE93_RS08165 PF07126 Cell-division protein ZapC FFE93_RS08170 PF03476 MOSC N-terminal beta barrel domain FFE93_RS08170 PF03473 MOSC domain FFE93_RS08170 PF00111 2Fe-2S iron-sulfur cluster binding domain FFE93_RS08175 PF01170 Putative RNA methylase family UPF0020 FFE93_RS08175 PF10672 S-adenosylmethionine-dependent methyltransferase FFE93_RS08175 PF02926 THUMP domain FFE93_RS08180 PF16326 ABC transporter C-terminal domain FFE93_RS08180 PF12848 ABC transporter FFE93_RS08180 PF00005 ABC transporter FFE93_RS08185 PF04403 Paraquat-inducible protein A FFE93_RS08190 PF02470 MlaD protein FFE93_RS08195 PF03886 ABC-type transport auxiliary lipoprotein component FFE93_RS08200 PF04957 Ribosome modulation factor FFE93_RS08205 PF00109 Beta-ketoacyl synthase, N-terminal domain FFE93_RS08205 PF02801 Beta-ketoacyl synthase, C-terminal domain FFE93_RS08215 PF07977 FabA-like domain FFE93_RS08220 PF13654 AAA domain FFE93_RS08220 PF05362 Lon protease (S16) C-terminal proteolytic domain FFE93_RS08225 PF17414 MatP C-terminal ribbon-helix-helix domain FFE93_RS08225 PF06303 MatP N-terminal domain FFE93_RS08230 PF01389 OmpA-like transmembrane domain FFE93_RS08230 PF00691 OmpA family FFE93_RS08235 PF03846 Cell division inhibitor SulA FFE93_RS08240 PF04994 TfoX C-terminal domain FFE93_RS08240 PF04993 TfoX N-terminal domain FFE93_RS08245 PF12805 FUSC-like inner membrane protein yccS FFE93_RS08250 PF03733 Inner membrane component domain FFE93_RS08255 PF13361 UvrD-like helicase C-terminal domain FFE93_RS08255 PF00580 UvrD/REP helicase N-terminal domain FFE93_RS08255 PF12462 DNA helicase IV / RNA helicase N terminal FFE93_RS08260 PF02142 MGS-like domain FFE93_RS08265 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) FFE93_RS08270 PF13380 CoA binding domain FFE93_RS08275 PF08755 Hemimethylated DNA-binding protein YccV like FFE93_RS08280 PF10672 S-adenosylmethionine-dependent methyltransferase FFE93_RS08280 PF17785 PUA-like domain FFE93_RS08285 PF00708 Acylphosphatase FFE93_RS08290 PF04358 DsrC like protein FFE93_RS08315 PF00535 Glycosyl transferase family 2 FFE93_RS08330 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FFE93_RS08330 PF00205 Thiamine pyrophosphate enzyme, central domain FFE93_RS08330 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FFE93_RS08335 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FFE93_RS08340 PF16363 GDP-mannose 4,6 dehydratase FFE93_RS08345 PF00483 Nucleotidyl transferase FFE93_RS08350 PF00111 2Fe-2S iron-sulfur cluster binding domain FFE93_RS08350 PF00175 Oxidoreductase NAD-binding domain FFE93_RS08350 PF00970 Oxidoreductase FAD-binding domain FFE93_RS08385 PF02335 Cytochrome c552 FFE93_RS08390 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) FFE93_RS08390 PF13435 Cytochrome c554 and c-prime FFE93_RS08395 PF13247 4Fe-4S dicluster domain FFE93_RS08395 PF00037 4Fe-4S binding domain FFE93_RS08400 PF03916 Polysulphide reductase, NrfD FFE93_RS08405 PF01578 Cytochrome C assembly protein FFE93_RS08405 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal FFE93_RS08410 PF08534 Redoxin FFE93_RS08415 PF03918 Cytochrome C biogenesis protein FFE93_RS08425 PF03472 Autoinducer binding domain FFE93_RS08425 PF00196 Bacterial regulatory proteins, luxR family FFE93_RS08430 PF00765 Autoinducer synthase FFE93_RS08440 PF00999 Sodium/hydrogen exchanger family FFE93_RS08440 PF02080 TrkA-C domain FFE93_RS08440 PF03471 Transporter associated domain FFE93_RS08450 PF01757 Acyltransferase family FFE93_RS08455 PF04349 Periplasmic glucan biosynthesis protein, MdoG FFE93_RS08460 PF00535 Glycosyl transferase family 2 FFE93_RS08465 PF07119 Protein of unknown function (DUF1375) FFE93_RS08475 PF00854 POT family FFE93_RS08480 PF07681 DoxX FFE93_RS08485 PF03279 Bacterial lipid A biosynthesis acyltransferase FFE93_RS08490 PF00196 Bacterial regulatory proteins, luxR family FFE93_RS08490 PF00072 Response regulator receiver domain FFE93_RS08495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFE93_RS08495 PF00512 His Kinase A (phospho-acceptor) domain FFE93_RS08500 PF13247 4Fe-4S dicluster domain FFE93_RS08505 PF03916 Polysulphide reductase, NrfD FFE93_RS08510 PF01568 Molydopterin dinucleotide binding domain FFE93_RS08510 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FFE93_RS08510 PF00384 Molybdopterin oxidoreductase FFE93_RS08520 PF17773 UPF0176 acylphosphatase like domain FFE93_RS08520 PF12368 Rhodanase C-terminal FFE93_RS08520 PF00581 Rhodanese-like domain FFE93_RS08525 PF01594 AI-2E family transporter FFE93_RS08535 PF00196 Bacterial regulatory proteins, luxR family FFE93_RS08540 PF01266 FAD dependent oxidoreductase FFE93_RS08545 PF13991 BssS protein family FFE93_RS08550 PF06183 DinI-like family FFE93_RS08555 PF01979 Amidohydrolase family FFE93_RS08560 PF03992 Antibiotic biosynthesis monooxygenase FFE93_RS08565 PF00575 S1 RNA binding domain FFE93_RS08565 PF12111 Polyribonucleotide phosphorylase C terminal FFE93_RS08565 PF10150 Ribonuclease E/G family FFE93_RS08570 PF00849 RNA pseudouridylate synthase FFE93_RS08570 PF01479 S4 domain FFE93_RS08575 PF02545 Maf-like protein FFE93_RS08580 PF02620 Large ribosomal RNA subunit accumulation protein YceD FFE93_RS08585 PF01783 Ribosomal L32p protein family FFE93_RS08590 PF02504 Fatty acid synthesis protein FFE93_RS08595 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FFE93_RS08595 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FFE93_RS08600 PF00698 Acyl transferase domain FFE93_RS08610 PF00550 Phosphopantetheine attachment site FFE93_RS08615 PF00109 Beta-ketoacyl synthase, N-terminal domain FFE93_RS08615 PF02801 Beta-ketoacyl synthase, C-terminal domain FFE93_RS08620 PF01063 Amino-transferase class IV FFE93_RS08625 PF02618 YceG-like family FFE93_RS08630 PF02223 Thymidylate kinase FFE93_RS08635 PF09115 DNA polymerase III, delta subunit, C terminal FFE93_RS08640 PF01026 TatD related DNase FFE93_RS08645 PF00367 phosphotransferase system, EIIB FFE93_RS08645 PF02378 Phosphotransferase system, EIIC FFE93_RS08655 PF03412 Peptidase C39 family FFE93_RS08655 PF00005 ABC transporter FFE93_RS08655 PF00664 ABC transporter transmembrane region FFE93_RS08660 PF00529 HlyD membrane-fusion protein of T1SS FFE93_RS08660 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FFE93_RS08665 PF04055 Radical SAM superfamily FFE93_RS08665 PF13186 Iron-sulfur cluster-binding domain FFE93_RS08675 PF08501 Shikimate dehydrogenase substrate binding domain FFE93_RS08680 PF01230 HIT domain FFE93_RS08685 PF07233 Protein of unknown function (DUF1425) FFE93_RS08690 PF08139 Prokaryotic membrane lipoprotein lipid attachment site FFE93_RS08690 PF13036 Peptidoglycan-synthase activator LpoB FFE93_RS08695 PF01636 Phosphotransferase enzyme family FFE93_RS08700 PF00933 Glycosyl hydrolase family 3 N terminal domain FFE93_RS08705 PF05728 Uncharacterised protein family (UPF0227) FFE93_RS08710 PF07992 Pyridine nucleotide-disulphide oxidoreductase FFE93_RS08715 PF05433 Glycine zipper 2TM domain FFE93_RS08720 PF03461 TRCF domain FFE93_RS08720 PF00271 Helicase conserved C-terminal domain FFE93_RS08720 PF17757 UvrB interaction domain FFE93_RS08720 PF00270 DEAD/DEAH box helicase FFE93_RS08720 PF02559 CarD-like/TRCF domain FFE93_RS08725 PF12704 MacB-like periplasmic core domain FFE93_RS08725 PF02687 FtsX-like permease family FFE93_RS08730 PF00005 ABC transporter FFE93_RS08735 PF02687 FtsX-like permease family FFE93_RS08735 PF12704 MacB-like periplasmic core domain FFE93_RS08740 PF00480 ROK family FFE93_RS08745 PF02146 Sir2 family FFE93_RS08750 PF07687 Peptidase dimerisation domain FFE93_RS08750 PF01546 Peptidase family M20/M25/M40 FFE93_RS08760 PF08007 Cupin superfamily protein FFE93_RS08765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFE93_RS08765 PF08918 PhoQ Sensor FFE93_RS08770 PF00072 Response regulator receiver domain FFE93_RS08770 PF00486 Transcriptional regulatory protein, C terminal FFE93_RS08775 PF00206 Lyase FFE93_RS08775 PF08328 Adenylosuccinate lyase C-terminal FFE93_RS08780 PF04356 Protein of unknown function (DUF489) FFE93_RS08790 PF00293 NUDIX domain FFE93_RS08795 PF00849 RNA pseudouridylate synthase FFE93_RS08800 PF00180 Isocitrate/isopropylmalate dehydrogenase FFE93_RS08820 PF00324 Amino acid permease FFE93_RS08825 PF03390 2-hydroxycarboxylate transporter family FFE93_RS08830 PF00072 Response regulator receiver domain FFE93_RS08835 PF00989 PAS fold FFE93_RS08835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFE93_RS08835 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain FFE93_RS08835 PF17203 Single cache domain 3 FFE93_RS08840 PF04960 Glutaminase FFE93_RS08850 PF00356 Bacterial regulatory proteins, lacI family FFE93_RS08855 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FFE93_RS08860 PF02378 Phosphotransferase system, EIIC FFE93_RS08865 PF00232 Glycosyl hydrolase family 1 FFE93_RS08870 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit FFE93_RS08880 PF03239 Iron permease FTR1 family FFE93_RS08885 PF10634 Fe2+ transport protein FFE93_RS08895 PF12704 MacB-like periplasmic core domain FFE93_RS08895 PF02687 FtsX-like permease family FFE93_RS08895 PF00005 ABC transporter FFE93_RS08905 PF12704 MacB-like periplasmic core domain FFE93_RS08905 PF02687 FtsX-like permease family FFE93_RS08905 PF00005 ABC transporter FFE93_RS08920 PF03848 Tellurite resistance protein TehB FFE93_RS08920 PF09313 Domain of unknown function (DUF1971) FFE93_RS08925 PF06276 Ferric iron reductase FhuF-like transporter FFE93_RS08925 PF11575 FhuF 2Fe-2S C-terminal domain FFE93_RS08930 PF00557 Metallopeptidase family M24 FFE93_RS08930 PF05195 Aminopeptidase P, N-terminal domain FFE93_RS08940 PF01522 Polysaccharide deacetylase FFE93_RS08940 PF14883 Hypothetical glycosyl hydrolase family 13 FFE93_RS08945 PF00535 Glycosyl transferase family 2 FFE93_RS08950 PF13994 PgaD-like protein FFE93_RS08965 PF02562 PhoH-like protein FFE93_RS08970 PF01699 Sodium/calcium exchanger protein FFE93_RS08975 PF08021 Siderophore-interacting FAD-binding domain FFE93_RS08975 PF04954 Siderophore-interacting protein FFE93_RS08985 PF03466 LysR substrate binding domain FFE93_RS08985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFE93_RS08990 PF00672 HAMP domain FFE93_RS08990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFE93_RS08990 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term FFE93_RS08990 PF07730 Histidine kinase FFE93_RS09000 PF02322 Cytochrome bd terminal oxidase subunit II FFE93_RS09005 PF01654 Cytochrome bd terminal oxidase subunit I FFE93_RS09010 PF00392 Bacterial regulatory proteins, gntR family FFE93_RS09010 PF00155 Aminotransferase class I and II FFE93_RS09015 PF00202 Aminotransferase class-III FFE93_RS09020 PF04958 Arginine N-succinyltransferase beta subunit FFE93_RS09025 PF00171 Aldehyde dehydrogenase family FFE93_RS09030 PF04996 Succinylarginine dihydrolase FFE93_RS09035 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family FFE93_RS09040 PF00267 Gram-negative porin FFE93_RS09050 PF01979 Amidohydrolase family FFE93_RS09055 PF00392 Bacterial regulatory proteins, gntR family FFE93_RS09055 PF07702 UTRA domain FFE93_RS09060 PF01979 Amidohydrolase family FFE93_RS09065 PF05962 HutD FFE93_RS09070 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment FFE93_RS09080 PF01551 Peptidase family M23 FFE93_RS09080 PF01476 LysM domain FFE93_RS09085 PF00248 Aldo/keto reductase family FFE93_RS09090 PF00248 Aldo/keto reductase family FFE93_RS09110 PF00672 HAMP domain FFE93_RS09110 PF00512 His Kinase A (phospho-acceptor) domain FFE93_RS09110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFE93_RS09115 PF00486 Transcriptional regulatory protein, C terminal FFE93_RS09115 PF00072 Response regulator receiver domain FFE93_RS09120 PF12146 Serine aminopeptidase, S33 FFE93_RS09130 PF06071 Protein of unknown function (DUF933) FFE93_RS09130 PF01926 50S ribosome-binding GTPase FFE93_RS09140 PF01195 Peptidyl-tRNA hydrolase FFE93_RS09145 PF10762 Protein of unknown function (DUF2583) FFE93_RS09150 PF14572 Phosphoribosyl synthetase-associated domain FFE93_RS09150 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FFE93_RS09155 PF08544 GHMP kinases C terminal FFE93_RS09155 PF00288 GHMP kinases N terminal domain FFE93_RS09160 PF03550 Outer membrane lipoprotein LolB FFE93_RS09165 PF01488 Shikimate / quinate 5-dehydrogenase FFE93_RS09165 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain FFE93_RS09165 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain FFE93_RS09170 PF00472 RF-1 domain FFE93_RS09170 PF03462 PCRF domain FFE93_RS09175 PF17827 PrmC N-terminal domain FFE93_RS09175 PF13847 Methyltransferase domain FFE93_RS09180 PF04247 Invasion gene expression up-regulator, SirB FFE93_RS09185 PF13369 Transglutaminase-like superfamily FFE93_RS09190 PF00793 DAHP synthetase I family FFE93_RS09195 PF00916 Sulfate permease family FFE93_RS09195 PF01740 STAS domain FFE93_RS09200 PF07694 5TMR of 5TMR-LYT FFE93_RS09200 PF00990 Diguanylate cyclase, GGDEF domain FFE93_RS09215 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FFE93_RS09220 PF02811 PHP domain FFE93_RS09225 PF02613 Nitrate reductase delta subunit FFE93_RS09230 PF07273 Protein of unknown function (DUF1439) FFE93_RS09235 PF07690 Major Facilitator Superfamily FFE93_RS09240 PF13302 Acetyltransferase (GNAT) domain FFE93_RS09245 PF04337 Protein of unknown function, DUF480 FFE93_RS09250 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FFE93_RS09255 PF03023 Lipid II flippase MurJ FFE93_RS09260 PF05746 DALR anticodon binding domain FFE93_RS09260 PF03485 Arginyl tRNA synthetase N terminal domain FFE93_RS09260 PF00750 tRNA synthetases class I (R) FFE93_RS09265 PF06185 YecM protein FFE93_RS09270 PF03932 CutC family FFE93_RS09280 PF08003 Protein of unknown function (DUF1698) FFE93_RS09285 PF13649 Methyltransferase domain FFE93_RS09290 PF01124 MAPEG family FFE93_RS09295 PF00857 Isochorismatase family FFE93_RS09305 PF01336 OB-fold nucleic acid binding domain FFE93_RS09305 PF02938 GAD domain FFE93_RS09305 PF00152 tRNA synthetases class II (D, K and N) FFE93_RS09310 PF00293 NUDIX domain FFE93_RS09315 PF01709 Transcriptional regulator FFE93_RS09320 PF02075 Crossover junction endodeoxyribonuclease RuvC FFE93_RS09325 PF01330 RuvA N terminal domain FFE93_RS09325 PF07499 RuvA, C-terminal domain FFE93_RS09330 PF05491 RuvB C-terminal winged helix domain FFE93_RS09330 PF05496 Holliday junction DNA helicase RuvB P-loop domain FFE93_RS09330 PF17864 RuvB AAA lid domain FFE93_RS09335 PF00950 ABC 3 transport family FFE93_RS09340 PF00005 ABC transporter FFE93_RS09345 PF01297 Zinc-uptake complex component A periplasmic FFE93_RS09350 PF01551 Peptidase family M23 FFE93_RS09350 PF08525 Opacity-associated protein A N-terminal motif FFE93_RS09350 PF01476 LysM domain FFE93_RS09355 PF03279 Bacterial lipid A biosynthesis acyltransferase FFE93_RS09360 PF02887 Pyruvate kinase, alpha/beta domain FFE93_RS09360 PF00224 Pyruvate kinase, barrel domain FFE93_RS09365 PF01418 Helix-turn-helix domain, rpiR family FFE93_RS09365 PF01380 SIS domain FFE93_RS09370 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain FFE93_RS09370 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain FFE93_RS09375 PF01081 KDPG and KHG aldolase FFE93_RS09380 PF00893 Small Multidrug Resistance protein FFE93_RS09385 PF00893 Small Multidrug Resistance protein FFE93_RS09390 PF01042 Endoribonuclease L-PSP FFE93_RS09395 PF04851 Type III restriction enzyme, res subunit FFE93_RS09395 PF13307 Helicase C-terminal domain FFE93_RS09400 PF00814 Glycoprotease family FFE93_RS09405 PF03843 Outer membrane lipoprotein Slp family FFE93_RS09410 PF00501 AMP-binding enzyme FFE93_RS09410 PF13193 AMP-binding enzyme C-terminal domain FFE93_RS09415 PF01612 3'-5' exonuclease FFE93_RS09415 PF00570 HRDC domain FFE93_RS09420 PF03776 Septum formation topological specificity factor MinE FFE93_RS09425 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FFE93_RS09430 PF03775 Septum formation inhibitor MinC, C-terminal domain FFE93_RS09430 PF05209 Septum formation inhibitor MinC, N-terminal domain FFE93_RS09435 PF05166 YcgL domain FFE93_RS09440 PF01557 Fumarylacetoacetate (FAA) hydrolase family FFE93_RS09445 PF03692 Putative zinc- or iron-chelating domain FFE93_RS09455 PF00132 Bacterial transferase hexapeptide (six repeats) FFE93_RS09455 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 FFE93_RS09460 PF02600 Disulfide bond formation protein DsbB FFE93_RS09465 PF06450 Bacterial Na+/H+ antiporter B (NhaB) FFE93_RS09475 PF07840 FadR C-terminal domain FFE93_RS09475 PF00392 Bacterial regulatory proteins, gntR family FFE93_RS09480 PF01032 FecCD transport family FFE93_RS09485 PF00255 Glutathione peroxidase FFE93_RS09490 PF00005 ABC transporter FFE93_RS09495 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FFE93_RS09500 PF00535 Glycosyl transferase family 2 FFE93_RS09505 PF02911 Formyl transferase, C-terminal domain FFE93_RS09505 PF01370 NAD dependent epimerase/dehydratase family FFE93_RS09505 PF00551 Formyl transferase FFE93_RS09510 PF01522 Polysaccharide deacetylase FFE93_RS09515 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase FFE93_RS09520 PF00892 EamA-like transporter family FFE93_RS09530 PF00877 NlpC/P60 family FFE93_RS09535 PF03099 Biotin/lipoate A/B protein ligase family FFE93_RS09535 PF10437 Bacterial lipoate protein ligase C-terminus FFE93_RS09540 PF02696 Uncharacterized ACR, YdiU/UPF0061 family FFE93_RS09545 PF00593 TonB dependent receptor FFE93_RS09545 PF07715 TonB-dependent Receptor Plug Domain FFE93_RS09550 PF10636 Hemin uptake protein hemP FFE93_RS09555 PF00793 DAHP synthetase I family FFE93_RS09560 PF03618 Kinase/pyrophosphorylase FFE93_RS09570 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain FFE93_RS09570 PF00391 PEP-utilising enzyme, mobile domain FFE93_RS09570 PF02896 PEP-utilising enzyme, TIM barrel domain FFE93_RS09580 PF01594 AI-2E family transporter FFE93_RS09585 PF02913 FAD linked oxidases, C-terminal domain FFE93_RS09585 PF01565 FAD binding domain FFE93_RS09585 PF13183 4Fe-4S dicluster domain FFE93_RS09590 PF03061 Thioesterase superfamily FFE93_RS09600 PF01521 Iron-sulphur cluster biosynthesis FFE93_RS09605 PF01458 Uncharacterized protein family (UPF0051) FFE93_RS09610 PF00005 ABC transporter FFE93_RS09615 PF01458 Uncharacterized protein family (UPF0051) FFE93_RS09620 PF00266 Aminotransferase class-V FFE93_RS09625 PF02657 Fe-S metabolism associated domain FFE93_RS09630 PF03734 L,D-transpeptidase catalytic domain FFE93_RS09630 PF01476 LysM domain FFE93_RS09630 PF17969 L,D-transpeptidase C-terminal domain FFE93_RS09635 PF04728 Lipoprotein leucine-zipper FFE93_RS09640 PF00224 Pyruvate kinase, barrel domain FFE93_RS09640 PF02887 Pyruvate kinase, alpha/beta domain FFE93_RS09655 PF01554 MatE FFE93_RS09660 PF00677 Lumazine binding domain FFE93_RS09670 PF07690 Major Facilitator Superfamily FFE93_RS09675 PF03466 LysR substrate binding domain FFE93_RS09675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFE93_RS09680 PF00356 Bacterial regulatory proteins, lacI family FFE93_RS09690 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FFE93_RS09690 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FFE93_RS09695 PF00877 NlpC/P60 family FFE93_RS09700 PF00462 Glutaredoxin FFE93_RS09705 PF00929 Exonuclease FFE93_RS09710 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FFE93_RS09715 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FFE93_RS09720 PF00440 Bacterial regulatory proteins, tetR family FFE93_RS09720 PF16925 Tetracyclin repressor-like, C-terminal domain FFE93_RS09725 PF08019 Phosphoethanolamine transferase EptA/EptB FFE93_RS09725 PF00884 Sulfatase FFE93_RS09730 PF06945 Protein of unknown function (DUF1289) FFE93_RS09735 PF00248 Aldo/keto reductase family FFE93_RS09750 PF01047 MarR family FFE93_RS09755 PF05433 Glycine zipper 2TM domain FFE93_RS09760 PF03702 Anhydro-N-acetylmuramic acid kinase FFE93_RS09765 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme FFE93_RS09770 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region FFE93_RS09770 PF01243 Pyridoxamine 5'-phosphate oxidase FFE93_RS09775 PF01479 S4 domain FFE93_RS09775 PF00579 tRNA synthetases class I (W and Y) FFE93_RS09780 PF08543 Phosphomethylpyrimidine kinase FFE93_RS09785 PF00043 Glutathione S-transferase, C-terminal domain FFE93_RS09785 PF02798 Glutathione S-transferase, N-terminal domain FFE93_RS09790 PF11656 YjbD family (DUF3811) FFE93_RS09795 PF04893 Yip1 domain FFE93_RS09805 PF00854 POT family FFE93_RS09820 PF00005 ABC transporter FFE93_RS09825 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FFE93_RS09825 PF00005 ABC transporter FFE93_RS09830 PF00528 Binding-protein-dependent transport system inner membrane component FFE93_RS09830 PF12911 N-terminal TM domain of oligopeptide transport permease C FFE93_RS09835 PF00528 Binding-protein-dependent transport system inner membrane component FFE93_RS09840 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FFE93_RS09850 PF00158 Sigma-54 interaction domain FFE93_RS09850 PF02954 Bacterial regulatory protein, Fis family FFE93_RS09855 PF04012 PspA/IM30 family FFE93_RS09860 PF06667 Phage shock protein B FFE93_RS09865 PF04024 PspC domain FFE93_RS09875 PF04317 YcjX-like family, DUF463 FFE93_RS09880 PF05128 Domain of unknown function (DUF697) FFE93_RS09885 PF08808 RES domain FFE93_RS09890 PF09722 Protein of unknown function (DUF2384) FFE93_RS09895 PF00158 Sigma-54 interaction domain FFE93_RS09895 PF18024 Helix-turn-helix domain FFE93_RS09900 PF08534 Redoxin FFE93_RS09905 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FFE93_RS09905 PF13378 Enolase C-terminal domain-like FFE93_RS09910 PF00246 Zinc carboxypeptidase FFE93_RS09915 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FFE93_RS09930 PF01544 CorA-like Mg2+ transporter protein FFE93_RS09935 PF01171 PP-loop family FFE93_RS09940 PF03123 CAT RNA binding domain FFE93_RS09940 PF00874 PRD domain FFE93_RS09945 PF00367 phosphotransferase system, EIIB FFE93_RS09945 PF02378 Phosphotransferase system, EIIC FFE93_RS09945 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FFE93_RS09950 PF00232 Glycosyl hydrolase family 1 FFE93_RS09955 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FFE93_RS09955 PF10371 Domain of unknown function FFE93_RS09955 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II FFE93_RS09955 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase FFE93_RS09955 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg FFE93_RS09960 PF00893 Small Multidrug Resistance protein FFE93_RS09965 PF02308 MgtC family FFE93_RS09970 PF03891 Domain of unknown function (DUF333) FFE93_RS09975 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FFE93_RS09975 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FFE93_RS09980 PF11739 Dicarboxylate transport FFE93_RS09985 PF13617 YnbE-like lipoprotein FFE93_RS09990 PF07027 Protein of unknown function (DUF1318) FFE93_RS10010 PF00083 Sugar (and other) transporter FFE93_RS10015 PF02525 Flavodoxin-like fold FFE93_RS10020 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold FFE93_RS10020 PF00271 Helicase conserved C-terminal domain FFE93_RS10020 PF11898 Domain of unknown function (DUF3418) FFE93_RS10020 PF00270 DEAD/DEAH box helicase FFE93_RS10020 PF04408 Helicase associated domain (HA2) FFE93_RS10035 PF00574 Clp protease FFE93_RS10040 PF00089 Trypsin FFE93_RS10045 PF02074 Carboxypeptidase Taq (M32) metallopeptidase FFE93_RS10050 PF00672 HAMP domain FFE93_RS10050 PF00512 His Kinase A (phospho-acceptor) domain FFE93_RS10050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFE93_RS10055 PF00486 Transcriptional regulatory protein, C terminal FFE93_RS10055 PF00072 Response regulator receiver domain FFE93_RS10065 PF13520 Amino acid permease FFE93_RS10070 PF07338 Protein of unknown function (DUF1471) FFE93_RS10075 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FFE93_RS10075 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FFE93_RS10075 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch FFE93_RS10080 PF02233 NAD(P) transhydrogenase beta subunit FFE93_RS10085 PF00582 Universal stress protein family FFE93_RS10090 PF00027 Cyclic nucleotide-binding domain FFE93_RS10090 PF13545 Crp-like helix-turn-helix domain FFE93_RS10095 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FFE93_RS10095 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FFE93_RS10105 PF06445 GyrI-like small molecule binding domain FFE93_RS10115 PF00245 Alkaline phosphatase FFE93_RS10135 PF13419 Haloacid dehalogenase-like hydrolase FFE93_RS10140 PF04960 Glutaminase FFE93_RS10145 PF13520 Amino acid permease FFE93_RS10150 PF00282 Pyridoxal-dependent decarboxylase conserved domain FFE93_RS10155 PF01510 N-acetylmuramoyl-L-alanine amidase FFE93_RS10175 PF01048 Phosphorylase superfamily FFE93_RS10175 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus FFE93_RS10180 PF04754 Putative transposase, YhgA-like FFE93_RS10190 PF00497 Bacterial extracellular solute-binding proteins, family 3 FFE93_RS10195 PF00528 Binding-protein-dependent transport system inner membrane component FFE93_RS10200 PF00528 Binding-protein-dependent transport system inner membrane component FFE93_RS10205 PF01037 Lrp/AsnC ligand binding domain FFE93_RS10215 PF02798 Glutathione S-transferase, N-terminal domain FFE93_RS10235 PF01022 Bacterial regulatory protein, arsR family FFE93_RS10240 PF02040 Arsenical pump membrane protein FFE93_RS10250 PF07338 Protein of unknown function (DUF1471) FFE93_RS10255 PF00106 short chain dehydrogenase FFE93_RS10260 PF02048 Heat-stable enterotoxin ST FFE93_RS10280 PF03797 Autotransporter beta-domain FFE93_RS10285 PF06932 Protein of unknown function (DUF1283) FFE93_RS10290 PF06649 Protein of unknown function (DUF1161) FFE93_RS10295 PF00654 Voltage gated chloride channel FFE93_RS10315 PF00480 ROK family FFE93_RS10340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFE93_RS10340 PF03466 LysR substrate binding domain FFE93_RS10345 PF07690 Major Facilitator Superfamily FFE93_RS10365 PF07690 Major Facilitator Superfamily FFE93_RS10375 PF01526 Tn3 transposase DDE domain FFE93_RS10375 PF13700 Domain of unknown function (DUF4158) FFE93_RS10380 PF05472 DNA replication terminus site-binding protein (Ter protein) FFE93_RS10385 PF00206 Lyase FFE93_RS10385 PF10415 Fumarase C C-terminus FFE93_RS10390 PF01238 Phosphomannose isomerase type I FFE93_RS10395 PF06097 Bacterial protein of unknown function (DUF945) FFE93_RS10405 PF00356 Bacterial regulatory proteins, lacI family FFE93_RS10405 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FFE93_RS10410 PF02378 Phosphotransferase system, EIIC FFE93_RS10410 PF00367 phosphotransferase system, EIIB FFE93_RS10415 PF00155 Aminotransferase class I and II FFE93_RS10425 PF00962 Adenosine/AMP deaminase FFE93_RS10430 PF13593 SBF-like CPA transporter family (DUF4137) FFE93_RS10435 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FFE93_RS10435 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FFE93_RS10440 PF02311 AraC-like ligand binding domain FFE93_RS10440 PF12833 Helix-turn-helix domain FFE93_RS10445 PF02653 Branched-chain amino acid transport system / permease component FFE93_RS10450 PF00005 ABC transporter FFE93_RS10455 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FFE93_RS10460 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FFE93_RS10465 PF02610 L-arabinose isomerase FFE93_RS10465 PF11762 L-arabinose isomerase C-terminal domain FFE93_RS10470 PF03412 Peptidase C39 family FFE93_RS10470 PF00005 ABC transporter FFE93_RS10470 PF00664 ABC transporter transmembrane region FFE93_RS10480 PF00005 ABC transporter FFE93_RS10480 PF03412 Peptidase C39 family FFE93_RS10480 PF00664 ABC transporter transmembrane region FFE93_RS10485 PF01268 Formate--tetrahydrofolate ligase FFE93_RS10490 PF10754 Protein of unknown function (DUF2569) FFE93_RS10495 PF02508 Rnf-Nqr subunit, membrane protein FFE93_RS10500 PF04060 Putative Fe-S cluster FFE93_RS10505 PF10531 SLBB domain FFE93_RS10505 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FFE93_RS10505 PF13237 4Fe-4S dicluster domain FFE93_RS10505 PF13375 RnfC Barrel sandwich hybrid domain FFE93_RS10510 PF12833 Helix-turn-helix domain FFE93_RS10510 PF06445 GyrI-like small molecule binding domain FFE93_RS10515 PF03116 NQR2, RnfD, RnfE family FFE93_RS10520 PF04205 FMN-binding domain FFE93_RS10525 PF02508 Rnf-Nqr subunit, membrane protein FFE93_RS10530 PF00633 Helix-hairpin-helix motif FFE93_RS10530 PF10576 Iron-sulfur binding domain of endonuclease III FFE93_RS10530 PF00730 HhH-GPD superfamily base excision DNA repair protein FFE93_RS10535 PF08206 Ribonuclease B OB domain FFE93_RS10535 PF00773 RNB domain FFE93_RS10535 PF00575 S1 RNA binding domain FFE93_RS10540 PF13722 5TM C-terminal transporter carbon starvation CstA FFE93_RS10540 PF02554 Carbon starvation protein CstA FFE93_RS10545 PF04328 Selenoprotein, putative FFE93_RS10550 PF00923 Transaldolase/Fructose-6-phosphate aldolase FFE93_RS10555 PF00455 DeoR C terminal sensor domain FFE93_RS10555 PF08220 DeoR-like helix-turn-helix domain FFE93_RS10560 PF00596 Class II Aldolase and Adducin N-terminal domain FFE93_RS10565 PF05433 Glycine zipper 2TM domain FFE93_RS10570 PF01253 Translation initiation factor SUI1 FFE93_RS10575 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FFE93_RS10580 PF07338 Protein of unknown function (DUF1471) FFE93_RS10590 PF18073 Rubredoxin metal binding domain FFE93_RS10595 PF06305 Lipopolysaccharide assembly protein A domain FFE93_RS10600 PF01569 PAP2 superfamily FFE93_RS10605 PF00925 GTP cyclohydrolase II FFE93_RS10610 PF00330 Aconitase family (aconitate hydratase) FFE93_RS10610 PF00694 Aconitase C-terminal domain FFE93_RS10625 PF03466 LysR substrate binding domain FFE93_RS10625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFE93_RS10630 PF08272 Topoisomerase I zinc-ribbon-like FFE93_RS10630 PF01131 DNA topoisomerase FFE93_RS10630 PF01396 Topoisomerase DNA binding C4 zinc finger FFE93_RS10630 PF01751 Toprim domain FFE93_RS10640 PF10692 Protein of unknown function (DUF2498) FFE93_RS10645 PF08496 Peptidase family S49 N-terminal FFE93_RS10645 PF01343 Peptidase family S49 FFE93_RS10650 PF00106 short chain dehydrogenase FFE93_RS10655 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP FFE93_RS10665 PF00849 RNA pseudouridylate synthase FFE93_RS10665 PF01479 S4 domain FFE93_RS10670 PF00196 Bacterial regulatory proteins, luxR family FFE93_RS10670 PF00072 Response regulator receiver domain FFE93_RS10675 PF03797 Autotransporter beta-domain FFE93_RS10680 PF01300 Telomere recombination FFE93_RS10685 PF02811 PHP domain FFE93_RS10695 PF04715 Anthranilate synthase component I, N terminal region FFE93_RS10695 PF00425 chorismate binding enzyme FFE93_RS10700 PF00117 Glutamine amidotransferase class-I FFE93_RS10705 PF02885 Glycosyl transferase family, helical bundle domain FFE93_RS10705 PF00591 Glycosyl transferase family, a/b domain FFE93_RS10710 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FFE93_RS10710 PF00218 Indole-3-glycerol phosphate synthase FFE93_RS10715 PF00291 Pyridoxal-phosphate dependent enzyme FFE93_RS10720 PF00290 Tryptophan synthase alpha chain FFE93_RS10730 PF03922 OmpW family FFE93_RS10750 PF04279 Intracellular septation protein A FFE93_RS10755 PF03061 Thioesterase superfamily FFE93_RS10760 PF03544 Gram-negative bacterial TonB protein C-terminal FFE93_RS10765 PF03795 YCII-related domain FFE93_RS10780 PF00563 EAL domain FFE93_RS10790 PF13091 PLD-like domain FFE93_RS10790 PF13396 Phospholipase_D-nuclease N-terminal FFE93_RS10795 PF04269 Protein of unknown function, DUF440 FFE93_RS10800 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FFE93_RS10800 PF00005 ABC transporter FFE93_RS10805 PF00005 ABC transporter FFE93_RS10805 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FFE93_RS10810 PF00528 Binding-protein-dependent transport system inner membrane component FFE93_RS10810 PF12911 N-terminal TM domain of oligopeptide transport permease C FFE93_RS10815 PF00528 Binding-protein-dependent transport system inner membrane component FFE93_RS10820 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FFE93_RS10830 PF01914 MarC family integral membrane protein FFE93_RS10840 PF00171 Aldehyde dehydrogenase family FFE93_RS10840 PF00465 Iron-containing alcohol dehydrogenase FFE93_RS10845 PF00265 Thymidine kinase FFE93_RS10855 PF00816 H-NS histone family FFE93_RS10860 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FFE93_RS10860 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FFE93_RS10860 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FFE93_RS10865 PF00072 Response regulator receiver domain FFE93_RS10870 PF01734 Patatin-like phospholipase FFE93_RS10880 PF02810 SEC-C motif FFE93_RS10885 PF00551 Formyl transferase FFE93_RS10885 PF01842 ACT domain FFE93_RS10925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFE93_RS10925 PF03466 LysR substrate binding domain FFE93_RS10930 PF03372 Endonuclease/Exonuclease/phosphatase family FFE93_RS10935 PF00293 NUDIX domain FFE93_RS10940 PF07383 Protein of unknown function (DUF1496) FFE93_RS10945 PF01131 DNA topoisomerase FFE93_RS10945 PF01751 Toprim domain FFE93_RS10950 PF02769 AIR synthase related protein, C-terminal domain FFE93_RS10950 PF00586 AIR synthase related protein, N-terminal domain FFE93_RS10960 PF00881 Nitroreductase family FFE93_RS10965 PF01343 Peptidase family S49 FFE93_RS10970 PF17763 Glutaminase/Asparaginase C-terminal domain FFE93_RS10970 PF00710 Asparaginase, N-terminal FFE93_RS10975 PF00857 Isochorismatase family FFE93_RS10980 PF07023 Protein of unknown function (DUF1315) FFE93_RS10985 PF01641 SelR domain FFE93_RS10990 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FFE93_RS10990 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FFE93_RS10995 PF01263 Aldose 1-epimerase FFE93_RS11005 PF06629 MltA-interacting protein MipA FFE93_RS11015 PF08298 PrkA AAA domain FFE93_RS11015 PF06798 PrkA serine protein kinase C-terminal domain FFE93_RS11020 PF04285 Protein of unknown function (DUF444) FFE93_RS11030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFE93_RS11030 PF03466 LysR substrate binding domain FFE93_RS11035 PF05726 Pirin C-terminal cupin domain FFE93_RS11035 PF02678 Pirin FFE93_RS11040 PF00990 Diguanylate cyclase, GGDEF domain FFE93_RS11040 PF13426 PAS domain FFE93_RS11040 PF00563 EAL domain FFE93_RS11045 PF07690 Major Facilitator Superfamily FFE93_RS11050 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FFE93_RS11055 PF00005 ABC transporter FFE93_RS11055 PF12704 MacB-like periplasmic core domain FFE93_RS11055 PF02687 FtsX-like permease family FFE93_RS11060 PF02321 Outer membrane efflux protein FFE93_RS11065 PF01168 Alanine racemase, N-terminal domain FFE93_RS11065 PF00842 Alanine racemase, C-terminal domain FFE93_RS11070 PF01266 FAD dependent oxidoreductase FFE93_RS11075 PF04293 SpoVR like protein FFE93_RS11085 PF02661 Fic/DOC family FFE93_RS11140 PF04606 Ogr/Delta-like zinc finger FFE93_RS11145 PF05154 TM2 domain FFE93_RS11150 PF00216 Bacterial DNA-binding protein FFE93_RS11155 PF03147 Ferredoxin-fold anticodon binding domain FFE93_RS11155 PF03483 B3/4 domain FFE93_RS11155 PF03484 tRNA synthetase B5 domain FFE93_RS11155 PF01588 Putative tRNA binding domain FFE93_RS11155 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain FFE93_RS11160 PF01409 tRNA synthetases class II core domain (F) FFE93_RS11160 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain FFE93_RS11165 PF00453 Ribosomal protein L20 FFE93_RS11170 PF01632 Ribosomal protein L35 FFE93_RS11175 PF00707 Translation initiation factor IF-3, C-terminal domain FFE93_RS11175 PF05198 Translation initiation factor IF-3, N-terminal domain FFE93_RS11180 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FFE93_RS11180 PF03129 Anticodon binding domain FFE93_RS11180 PF02824 TGS domain FFE93_RS11180 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FFE93_RS11185 PF13619 KTSC domain FFE93_RS11190 PF04474 Protein of unknown function (DUF554) FFE93_RS11215 PF01914 MarC family integral membrane protein FFE93_RS11220 PF01464 Transglycosylase SLT domain FFE93_RS11225 PF01297 Zinc-uptake complex component A periplasmic FFE93_RS11230 PF00005 ABC transporter FFE93_RS11235 PF00950 ABC 3 transport family FFE93_RS11240 PF00950 ABC 3 transport family FFE93_RS11245 PF03881 Fructosamine kinase FFE93_RS11255 PF14002 YniB-like protein FFE93_RS11260 PF13419 Haloacid dehalogenase-like hydrolase FFE93_RS11265 PF07883 Cupin domain FFE93_RS11275 PF06917 Periplasmic pectate lyase FFE93_RS11280 PF00528 Binding-protein-dependent transport system inner membrane component FFE93_RS11285 PF00528 Binding-protein-dependent transport system inner membrane component FFE93_RS11290 PF17912 MalK OB fold domain FFE93_RS11290 PF00005 ABC transporter FFE93_RS11290 PF03459 TOBE domain FFE93_RS11300 PF06178 Oligogalacturonate-specific porin protein (KdgM) FFE93_RS11305 PF04307 LexA-binding, inner membrane-associated putative hydrolase FFE93_RS11310 PF00375 Sodium:dicarboxylate symporter family FFE93_RS11315 PF01510 N-acetylmuramoyl-L-alanine amidase FFE93_RS11320 PF01614 Bacterial transcriptional regulator FFE93_RS11320 PF09339 IclR helix-turn-helix domain FFE93_RS11325 PF14583 Oligogalacturonate lyase FFE93_RS11330 PF07690 Major Facilitator Superfamily FFE93_RS11335 PF01435 Peptidase family M48 FFE93_RS11340 PF03572 Peptidase family S41 FFE93_RS11340 PF00595 PDZ domain FFE93_RS11340 PF11818 C-terminal domain of tail specific protease (DUF3340) FFE93_RS11340 PF17804 Tail specific protease N-terminal domain FFE93_RS11345 PF04352 ProQ/FINO family FFE93_RS11345 PF17516 ProQ C-terminal domain FFE93_RS11350 PF13185 GAF domain FFE93_RS11355 PF04403 Paraquat-inducible protein A FFE93_RS11360 PF02470 MlaD protein FFE93_RS11365 PF03466 LysR substrate binding domain FFE93_RS11365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFE93_RS11370 PF07690 Major Facilitator Superfamily FFE93_RS11405 PF00360 Phytochrome region FFE93_RS11405 PF00990 Diguanylate cyclase, GGDEF domain FFE93_RS11405 PF00563 EAL domain FFE93_RS11405 PF01590 GAF domain FFE93_RS11410 PF07351 Protein of unknown function (DUF1480) FFE93_RS11425 PF14834 Glutathione S-transferase, C-terminal domain FFE93_RS11425 PF02798 Glutathione S-transferase, N-terminal domain FFE93_RS11440 PF00849 RNA pseudouridylate synthase FFE93_RS11445 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) FFE93_RS11465 PF00106 short chain dehydrogenase FFE93_RS11495 PF01757 Acyltransferase family FFE93_RS11500 PF02413 Caudovirales tail fibre assembly protein, lambda gpK FFE93_RS11505 PF07484 Phage Tail Collar Domain FFE93_RS11560 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 FFE93_RS11560 PF13542 Helix-turn-helix domain of transposase family ISL3 FFE93_RS11560 PF01610 Transposase FFE93_RS11615 PF09979 Uncharacterized protein conserved in bacteria (DUF2213) FFE93_RS11625 PF06381 Protein of unknown function (DUF1073) FFE93_RS11635 PF04221 RelB antitoxin FFE93_RS11640 PF05016 ParE toxin of type II toxin-antitoxin system, parDE FFE93_RS11660 PF02195 ParB-like nuclease domain FFE93_RS11670 PF03793 PASTA domain FFE93_RS11670 PF00069 Protein kinase domain FFE93_RS11685 PF00959 Phage lysozyme FFE93_RS11705 PF06530 Phage antitermination protein Q FFE93_RS11710 PF07102 Protein of unknown function (DUF1364) FFE93_RS11765 PF01381 Helix-turn-helix FFE93_RS11805 PF00589 Phage integrase family FFE93_RS11805 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain FFE93_RS11810 PF10709 Protein of unknown function (DUF2511) FFE93_RS11815 PF05425 Copper resistance protein D FFE93_RS11820 PF04234 CopC domain FFE93_RS11825 PF00210 Ferritin-like domain FFE93_RS11830 PF06440 DNA polymerase III, theta subunit FFE93_RS11835 PF00561 alpha/beta hydrolase fold FFE93_RS11850 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FFE93_RS11850 PF00326 Prolyl oligopeptidase family FFE93_RS11855 PF13995 YebF-like protein FFE93_RS11860 PF04266 ASCH domain FFE93_RS11865 PF07130 YebG protein FFE93_RS11870 PF00271 Helicase conserved C-terminal domain FFE93_RS11870 PF00270 DEAD/DEAH box helicase FFE93_RS11870 PF03880 DbpA RNA binding domain FFE93_RS11875 PF02222 ATP-grasp domain FFE93_RS11880 PF03701 Uncharacterised protein family (UPF0181) FFE93_RS11885 PF04715 Anthranilate synthase component I, N terminal region FFE93_RS11885 PF00425 chorismate binding enzyme FFE93_RS11890 PF00293 NUDIX domain FFE93_RS11895 PF03315 Serine dehydratase beta chain FFE93_RS11895 PF03313 Serine dehydratase alpha chain FFE93_RS11900 PF03741 Integral membrane protein TerC family FFE93_RS11900 PF03471 Transporter associated domain FFE93_RS11905 PF03610 PTS system fructose IIA component FFE93_RS11905 PF03830 PTS system sorbose subfamily IIB component FFE93_RS11910 PF03609 PTS system sorbose-specific iic component FFE93_RS11915 PF03613 PTS system mannose/fructose/sorbose family IID component FFE93_RS11920 PF06173 Protein of unknown function (DUF986) FFE93_RS11925 PF02659 Putative manganese efflux pump FFE93_RS11930 PF07715 TonB-dependent Receptor Plug Domain FFE93_RS11930 PF00593 TonB dependent receptor FFE93_RS11935 PF00563 EAL domain FFE93_RS11935 PF00990 Diguanylate cyclase, GGDEF domain FFE93_RS11935 PF05231 MASE1 FFE93_RS11935 PF08447 PAS fold FFE93_RS11935 PF08448 PAS fold FFE93_RS11935 PF13426 PAS domain FFE93_RS11945 PF13847 Methyltransferase domain FFE93_RS11950 PF02578 Multi-copper polyphenol oxidoreductase laccase FFE93_RS11955 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) FFE93_RS11960 PF00313 'Cold-shock' DNA-binding domain FFE93_RS11965 PF10736 Protein of unknown function (DUF2627) FFE93_RS11970 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP FFE93_RS11975 PF00324 Amino acid permease FFE93_RS11990 PF13974 YebO-like protein FFE93_RS11995 PF13998 MgrB protein FFE93_RS12000 PF13996 YobH-like protein FFE93_RS12005 PF10964 Protein of unknown function (DUF2766) FFE93_RS12010 PF12833 Helix-turn-helix domain FFE93_RS12020 PF13520 Amino acid permease FFE93_RS12030 PF00005 ABC transporter FFE93_RS12030 PF00664 ABC transporter transmembrane region FFE93_RS12040 PF03372 Endonuclease/Exonuclease/phosphatase family FFE93_RS12050 PF00990 Diguanylate cyclase, GGDEF domain FFE93_RS12050 PF01590 GAF domain FFE93_RS12050 PF00563 EAL domain FFE93_RS12050 PF00360 Phytochrome region FFE93_RS12055 PF06411 HdeA/HdeB family FFE93_RS12060 PF01638 HxlR-like helix-turn-helix FFE93_RS12065 PF05368 NmrA-like family FFE93_RS12070 PF08447 PAS fold FFE93_RS12070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FFE93_RS12090 PF02899 Phage integrase, N-terminal SAM-like domain FFE93_RS12090 PF00589 Phage integrase family FFE93_RS12095 PF01610 Transposase FFE93_RS12095 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 FFE93_RS12095 PF13542 Helix-turn-helix domain of transposase family ISL3 FFE93_RS12110 PF06892 Phage regulatory protein CII (CP76) FFE93_RS12140 PF05840 Bacteriophage replication gene A protein (GPA) FFE93_RS12310 PF04606 Ogr/Delta-like zinc finger FFE93_RS12315 PF06183 DinI-like family FFE93_RS12320 PF06183 DinI-like family FFE93_RS12355 PF02413 Caudovirales tail fibre assembly protein, lambda gpK FFE93_RS12405 PF10145 Phage-related minor tail protein FFE93_RS12405 PF01551 Peptidase family M23 FFE93_RS12405 PF01464 Transglycosylase SLT domain FFE93_RS12505 PF00959 Phage lysozyme FFE93_RS12525 PF07102 Protein of unknown function (DUF1364) FFE93_RS12555 PF03796 DnaB-like helicase C terminal domain FFE93_RS12555 PF00772 DnaB-like helicase N terminal domain FFE93_RS12580 PF01381 Helix-turn-helix FFE93_RS12580 PF00717 Peptidase S24-like FFE93_RS12585 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) FFE93_RS12640 PF01066 CDP-alcohol phosphatidyltransferase FFE93_RS12645 PF01541 GIY-YIG catalytic domain FFE93_RS12645 PF02151 UvrB/uvrC motif FFE93_RS12645 PF08459 UvrC Helix-hairpin-helix N-terminal FFE93_RS12650 PF00196 Bacterial regulatory proteins, luxR family FFE93_RS12650 PF00072 Response regulator receiver domain FFE93_RS12655 PF10769 Protein of unknown function (DUF2594) FFE93_RS12660 PF06942 GlpM protein FFE93_RS12670 PF00672 HAMP domain FFE93_RS12670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FFE93_RS12670 PF02203 Tar ligand binding domain homologue FFE93_RS12675 PF00128 Alpha amylase, catalytic domain FFE93_RS12675 PF02806 Alpha amylase, C-terminal all-beta domain FFE93_RS12705 PF00324 Amino acid permease FFE93_RS12710 PF01344 Kelch motif FFE93_RS12725 PF00083 Sugar (and other) transporter FFE93_RS12730 PF03358 NADPH-dependent FMN reductase FFE93_RS12735 PF04261 Dyp-type peroxidase family FFE93_RS12740 PF13473 Cupredoxin-like domain FFE93_RS12740 PF09375 Imelysin FFE93_RS12745 PF03239 Iron permease FTR1 family FFE93_RS12750 PF00474 Sodium:solute symporter family FFE93_RS12755 PF14850 DNA-binding domain of Proline dehydrogenase FFE93_RS12755 PF01619 Proline dehydrogenase FFE93_RS12755 PF18327 Proline utilization A proline dehydrogenase N-terminal domain FFE93_RS12755 PF00171 Aldehyde dehydrogenase family FFE93_RS12770 PF00005 ABC transporter FFE93_RS12775 PF00528 Binding-protein-dependent transport system inner membrane component FFE93_RS12780 PF00497 Bacterial extracellular solute-binding proteins, family 3 FFE93_RS12785 PF00291 Pyridoxal-phosphate dependent enzyme FFE93_RS12790 PF02899 Phage integrase, N-terminal SAM-like domain FFE93_RS12795 PF04545 Sigma-70, region 4 FFE93_RS12795 PF04539 Sigma-70 region 3 FFE93_RS12795 PF04542 Sigma-70 region 2 FFE93_RS12805 PF08884 Flagellin D3 domain FFE93_RS12805 PF00669 Bacterial flagellin N-terminal helical region FFE93_RS12805 PF00700 Bacterial flagellin C-terminal helical region FFE93_RS12810 PF02465 Flagellar hook-associated protein 2 N-terminus FFE93_RS12810 PF07195 Flagellar hook-associated protein 2 C-terminus FFE93_RS12810 PF07196 Flagellin hook IN motif FFE93_RS12815 PF02561 Flagellar protein FliS FFE93_RS12820 PF05400 Flagellar protein FliT FFE93_RS12825 PF12833 Helix-turn-helix domain FFE93_RS12830 PF01966 HD domain FFE93_RS12840 PF02049 Flagellar hook-basal body complex protein FliE FFE93_RS12845 PF01514 Secretory protein of YscJ/FliF family FFE93_RS12845 PF08345 Flagellar M-ring protein C-terminal FFE93_RS12850 PF14842 FliG N-terminal domain FFE93_RS12850 PF14841 FliG middle domain FFE93_RS12850 PF01706 FliG C-terminal domain FFE93_RS12855 PF02108 Flagellar assembly protein FliH FFE93_RS12860 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FFE93_RS12860 PF18269 T3SS EscN ATPase C-terminal domain FFE93_RS12865 PF02050 Flagellar FliJ protein FFE93_RS12870 PF02120 Flagellar hook-length control protein FliK FFE93_RS12875 PF03748 Flagellar basal body-associated protein FliL FFE93_RS12880 PF02154 Flagellar motor switch protein FliM FFE93_RS12880 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FFE93_RS12885 PF16973 Flagellar motor switch protein FliN N-terminal FFE93_RS12885 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FFE93_RS12890 PF04347 Flagellar biosynthesis protein, FliO FFE93_RS12895 PF00813 FliP family FFE93_RS12900 PF01313 Bacterial export proteins, family 3 FFE93_RS12905 PF01311 Bacterial export proteins, family 1 FFE93_RS12910 PF00669 Bacterial flagellin N-terminal helical region FFE93_RS12915 PF00460 Flagella basal body rod protein FFE93_RS12915 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FFE93_RS12920 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase FFE93_RS12920 PF10135 Rod binding protein FFE93_RS12925 PF02119 Flagellar P-ring protein FFE93_RS12930 PF02107 Flagellar L-ring protein FFE93_RS12935 PF00460 Flagella basal body rod protein FFE93_RS12935 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FFE93_RS12940 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FFE93_RS12940 PF00460 Flagella basal body rod protein FFE93_RS12945 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FFE93_RS12945 PF00460 Flagella basal body rod protein FFE93_RS12945 PF07559 Flagellar basal body protein FlaE FFE93_RS12950 PF13861 FlgD Tudor-like domain FFE93_RS12950 PF03963 Flagellar hook capping protein - N-terminal region FFE93_RS12950 PF13860 FlgD Ig-like domain FFE93_RS12955 PF00460 Flagella basal body rod protein FFE93_RS12955 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FFE93_RS12960 PF00460 Flagella basal body rod protein FFE93_RS12965 PF17656 FlgA N-terminal domain FFE93_RS12965 PF13144 Chaperone for flagella basal body P-ring formation FFE93_RS12970 PF04316 Anti-sigma-28 factor, FlgM FFE93_RS12975 PF05130 FlgN protein FFE93_RS12980 PF06366 Flagellar protein FlhE FFE93_RS12985 PF00771 FHIPEP family FFE93_RS12990 PF01312 FlhB HrpN YscU SpaS Family FFE93_RS12995 PF04344 Chemotaxis phosphatase, CheZ FFE93_RS13000 PF00072 Response regulator receiver domain FFE93_RS13005 PF01339 CheB methylesterase FFE93_RS13005 PF00072 Response regulator receiver domain FFE93_RS13010 PF01739 CheR methyltransferase, SAM binding domain FFE93_RS13010 PF03705 CheR methyltransferase, all-alpha domain FFE93_RS13015 PF02203 Tar ligand binding domain homologue FFE93_RS13015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FFE93_RS13015 PF00672 HAMP domain FFE93_RS13020 PF00672 HAMP domain FFE93_RS13020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FFE93_RS13020 PF02203 Tar ligand binding domain homologue FFE93_RS13035 PF01584 CheW-like domain FFE93_RS13040 PF01627 Hpt domain FFE93_RS13040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFE93_RS13040 PF01584 CheW-like domain FFE93_RS13040 PF09078 CheY binding FFE93_RS13040 PF02895 Signal transducing histidine kinase, homodimeric domain FFE93_RS13045 PF13677 Membrane MotB of proton-channel complex MotA/MotB FFE93_RS13045 PF00691 OmpA family FFE93_RS13050 PF01618 MotA/TolQ/ExbB proton channel family FFE93_RS13055 PF05280 Flagellar transcriptional activator (FlhC) FFE93_RS13060 PF05247 Flagellar transcriptional activator (FlhD) FFE93_RS13065 PF00582 Universal stress protein family FFE93_RS13070 PF00690 Cation transporter/ATPase, N-terminus FFE93_RS13070 PF00689 Cation transporting ATPase, C-terminus FFE93_RS13075 PF02308 MgtC family FFE93_RS13080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FFE93_RS13080 PF00672 HAMP domain FFE93_RS13080 PF02203 Tar ligand binding domain homologue FFE93_RS13085 PF10781 Dextransucrase DSRB FFE93_RS13090 PF00313 'Cold-shock' DNA-binding domain FFE93_RS13095 PF00356 Bacterial regulatory proteins, lacI family FFE93_RS13100 PF02929 Beta galactosidase small chain FFE93_RS13100 PF02837 Glycosyl hydrolases family 2, sugar binding domain FFE93_RS13100 PF16353 Domain of unknown function(DUF4981) FFE93_RS13100 PF00703 Glycosyl hydrolases family 2 FFE93_RS13100 PF02836 Glycosyl hydrolases family 2, TIM barrel domain FFE93_RS13105 PF16197 Ketoacyl-synthetase C-terminal extension FFE93_RS13105 PF00109 Beta-ketoacyl synthase, N-terminal domain FFE93_RS13105 PF02801 Beta-ketoacyl synthase, C-terminal domain FFE93_RS13105 PF08659 KR domain FFE93_RS13105 PF00550 Phosphopantetheine attachment site FFE93_RS13105 PF14765 Polyketide synthase dehydratase FFE93_RS13105 PF00698 Acyl transferase domain FFE93_RS13105 PF08240 Alcohol dehydrogenase GroES-like domain FFE93_RS13105 PF00107 Zinc-binding dehydrogenase FFE93_RS13110 PF10777 Inner membrane protein YlaC FFE93_RS13115 PF01037 Lrp/AsnC ligand binding domain FFE93_RS13125 PF14001 YdfZ protein FFE93_RS13130 PF00328 Histidine phosphatase superfamily (branch 2) FFE93_RS13135 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FFE93_RS13140 PF13954 PapC N-terminal domain FFE93_RS13140 PF13953 PapC C-terminal domain FFE93_RS13140 PF00577 Outer membrane usher protein FFE93_RS13150 PF06167 Glucose-regulated metallo-peptidase M90 FFE93_RS13165 PF01648 4'-phosphopantetheinyl transferase superfamily FFE93_RS13165 PF17837 4'-phosphopantetheinyl transferase N-terminal domain FFE93_RS13170 PF00939 Sodium:sulfate symporter transmembrane region FFE93_RS13175 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase FFE93_RS13180 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase FFE93_RS13185 PF04223 Citrate lyase, alpha subunit (CitF) FFE93_RS13190 PF03328 HpcH/HpaI aldolase/citrate lyase family FFE93_RS13195 PF06857 Malonate decarboxylase delta subunit (MdcD) FFE93_RS13200 PF08218 Citrate lyase ligase C-terminal domain FFE93_RS13205 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain FFE93_RS13205 PF17203 Single cache domain 3 FFE93_RS13205 PF00989 PAS fold FFE93_RS13205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFE93_RS13210 PF00072 Response regulator receiver domain FFE93_RS13210 PF12431 Transcriptional regulator FFE93_RS13215 PF00072 Response regulator receiver domain FFE93_RS13215 PF00196 Bacterial regulatory proteins, luxR family FFE93_RS13220 PF05231 MASE1 FFE93_RS13220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFE93_RS13220 PF07730 Histidine kinase FFE93_RS13225 PF07690 Major Facilitator Superfamily FFE93_RS13235 PF00528 Binding-protein-dependent transport system inner membrane component FFE93_RS13240 PF00005 ABC transporter FFE93_RS13240 PF08402 TOBE domain FFE93_RS13250 PF00196 Bacterial regulatory proteins, luxR family FFE93_RS13250 PF00072 Response regulator receiver domain FFE93_RS13255 PF00497 Bacterial extracellular solute-binding proteins, family 3 FFE93_RS13255 PF00072 Response regulator receiver domain FFE93_RS13255 PF00989 PAS fold FFE93_RS13255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFE93_RS13255 PF01627 Hpt domain FFE93_RS13255 PF00512 His Kinase A (phospho-acceptor) domain FFE93_RS13265 PF02753 Pili assembly chaperone PapD, C-terminal domain FFE93_RS13265 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FFE93_RS13270 PF13953 PapC C-terminal domain FFE93_RS13270 PF13954 PapC N-terminal domain FFE93_RS13270 PF00577 Outer membrane usher protein FFE93_RS13280 PF02753 Pili assembly chaperone PapD, C-terminal domain FFE93_RS13280 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FFE93_RS13285 PF00849 RNA pseudouridylate synthase FFE93_RS13285 PF01479 S4 domain FFE93_RS13295 PF00005 ABC transporter FFE93_RS13295 PF12848 ABC transporter FFE93_RS13300 PF00072 Response regulator receiver domain FFE93_RS13300 PF01584 CheW-like domain FFE93_RS13305 PF01554 MatE FFE93_RS13310 PF00764 Arginosuccinate synthase FFE93_RS13315 PF02277 Phosphoribosyltransferase FFE93_RS13320 PF00300 Histidine phosphatase superfamily (branch 1) FFE93_RS13325 PF02654 Cobalamin-5-phosphate synthase FFE93_RS13330 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase FFE93_RS13335 PF07685 CobB/CobQ-like glutamine amidotransferase domain FFE93_RS13340 PF00005 ABC transporter FFE93_RS13345 PF02361 Cobalt transport protein FFE93_RS13350 PF02553 Cobalt transport protein component CbiN FFE93_RS13355 PF01891 Cobalt uptake substrate-specific transmembrane region FFE93_RS13360 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FFE93_RS13365 PF06180 Cobalt chelatase (CbiK) FFE93_RS13370 PF02571 Precorrin-6x reductase CbiJ/CobK FFE93_RS13375 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FFE93_RS13380 PF11761 Cobalamin biosynthesis central region FFE93_RS13380 PF11760 Cobalamin synthesis G N-terminal FFE93_RS13380 PF01890 Cobalamin synthesis G C-terminus FFE93_RS13385 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FFE93_RS13390 PF05175 Methyltransferase small domain FFE93_RS13395 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FFE93_RS13400 PF01888 CbiD FFE93_RS13405 PF02570 Precorrin-8X methylmutase FFE93_RS13410 PF03186 CobD/Cbib protein FFE93_RS13415 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FFE93_RS13415 PF07685 CobB/CobQ-like glutamine amidotransferase domain FFE93_RS13420 PF10114 Sensory domain found in PocR FFE93_RS13420 PF12833 Helix-turn-helix domain FFE93_RS13425 PF00230 Major intrinsic protein FFE93_RS13430 PF00936 BMC domain FFE93_RS13435 PF00936 BMC domain FFE93_RS13440 PF02286 Dehydratase large subunit FFE93_RS13445 PF02288 Dehydratase medium subunit FFE93_RS13450 PF02287 Dehydratase small subunit FFE93_RS13455 PF18427 DD-reactivating factor swiveling domain FFE93_RS13455 PF08841 Diol dehydratase reactivase ATPase-like domain FFE93_RS13465 PF00936 BMC domain FFE93_RS13470 PF00936 BMC domain FFE93_RS13475 PF06130 Phosphate propanoyltransferase FFE93_RS13485 PF03319 Ethanolamine utilisation protein EutN/carboxysome FFE93_RS13490 PF03928 Haem-degrading FFE93_RS13495 PF00171 Aldehyde dehydrogenase family FFE93_RS13500 PF00465 Iron-containing alcohol dehydrogenase FFE93_RS13505 PF10531 SLBB domain FFE93_RS13505 PF13375 RnfC Barrel sandwich hybrid domain FFE93_RS13505 PF13237 4Fe-4S dicluster domain FFE93_RS13505 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FFE93_RS13515 PF00936 BMC domain FFE93_RS13520 PF10662 Ethanolamine utilisation - propanediol utilisation FFE93_RS13525 PF00871 Acetokinase family FFE93_RS13530 PF10414 Sirohaem synthase dimerisation region FFE93_RS13530 PF14824 Sirohaem biosynthesis protein central FFE93_RS13530 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FFE93_RS13535 PF00155 Aminotransferase class I and II FFE93_RS13540 PF00288 GHMP kinases N terminal domain FFE93_RS13545 PF13407 Periplasmic binding protein domain FFE93_RS13550 PF00005 ABC transporter FFE93_RS13555 PF02653 Branched-chain amino acid transport system / permease component FFE93_RS13560 PF02653 Branched-chain amino acid transport system / permease component FFE93_RS13565 PF04363 Protein of unknown function (DUF496) FFE93_RS13575 PF00929 Exonuclease FFE93_RS13575 PF08411 Exonuclease C-terminal FFE93_RS13580 PF13520 Amino acid permease FFE93_RS13590 PF00465 Iron-containing alcohol dehydrogenase FFE93_RS13595 PF00005 ABC transporter FFE93_RS13600 PF02653 Branched-chain amino acid transport system / permease component FFE93_RS13605 PF01370 NAD dependent epimerase/dehydratase family FFE93_RS13615 PF01634 ATP phosphoribosyltransferase FFE93_RS13615 PF08029 HisG, C-terminal domain FFE93_RS13620 PF00815 Histidinol dehydrogenase FFE93_RS13625 PF00155 Aminotransferase class I and II FFE93_RS13630 PF00475 Imidazoleglycerol-phosphate dehydratase FFE93_RS13635 PF00117 Glutamine amidotransferase class-I FFE93_RS13640 PF00977 Histidine biosynthesis protein FFE93_RS13645 PF00977 Histidine biosynthesis protein FFE93_RS13650 PF01502 Phosphoribosyl-AMP cyclohydrolase FFE93_RS13650 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase FFE93_RS13655 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FFE93_RS13655 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain FFE93_RS13660 PF00483 Nucleotidyl transferase FFE93_RS13665 PF00483 Nucleotidyl transferase FFE93_RS13670 PF13439 Glycosyltransferase Family 4 FFE93_RS13670 PF00534 Glycosyl transferases group 1 FFE93_RS13675 PF13439 Glycosyltransferase Family 4 FFE93_RS13680 PF16363 GDP-mannose 4,6 dehydratase FFE93_RS13685 PF16363 GDP-mannose 4,6 dehydratase FFE93_RS13700 PF00005 ABC transporter FFE93_RS13700 PF14524 Wzt C-terminal domain FFE93_RS13710 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FFE93_RS13710 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FFE93_RS13710 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FFE93_RS13710 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FFE93_RS13715 PF01050 Mannose-6-phosphate isomerase FFE93_RS13715 PF00483 Nucleotidyl transferase FFE93_RS13720 PF03741 Integral membrane protein TerC family FFE93_RS13720 PF03471 Transporter associated domain FFE93_RS13720 PF00571 CBS domain FFE93_RS13725 PF03606 C4-dicarboxylate anaerobic carrier FFE93_RS13730 PF05170 AsmA family FFE93_RS13735 PF00692 dUTPase FFE93_RS13740 PF00485 Phosphoribulokinase / Uridine kinase family FFE93_RS13745 PF10609 NUBPL iron-transfer P-loop NTPase FFE93_RS13750 PF01588 Putative tRNA binding domain FFE93_RS13750 PF09334 tRNA synthetases class I (M) FFE93_RS13765 PF07690 Major Facilitator Superfamily FFE93_RS13770 PF03788 LrgA family FFE93_RS13775 PF04172 LrgB-like family FFE93_RS13780 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region FFE93_RS13780 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FFE93_RS13785 PF03949 Malic enzyme, NAD binding domain FFE93_RS13785 PF00390 Malic enzyme, N-terminal domain FFE93_RS13795 PF02698 DUF218 domain FFE93_RS13805 PF01455 HupF/HypC family FFE93_RS13810 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA FFE93_RS13815 PF00037 4Fe-4S binding domain FFE93_RS13815 PF12798 4Fe-4S binding domain FFE93_RS13820 PF00361 Proton-conducting membrane transporter FFE93_RS13825 PF00146 NADH dehydrogenase FFE93_RS13830 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FFE93_RS13830 PF00361 Proton-conducting membrane transporter FFE93_RS13835 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FFE93_RS13840 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FFE93_RS13840 PF00361 Proton-conducting membrane transporter FFE93_RS13845 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FFE93_RS13845 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FFE93_RS13845 PF00374 Nickel-dependent hydrogenase FFE93_RS13850 PF12838 4Fe-4S dicluster domain FFE93_RS13855 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FFE93_RS13860 PF07450 Formate hydrogenlyase maturation protein HycH FFE93_RS13865 PF01750 Hydrogenase maturation protease FFE93_RS13870 PF13247 4Fe-4S dicluster domain FFE93_RS13870 PF12800 4Fe-4S binding domain FFE93_RS13875 PF01568 Molydopterin dinucleotide binding domain FFE93_RS13875 PF00384 Molybdopterin oxidoreductase FFE93_RS13875 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FFE93_RS13880 PF01590 GAF domain FFE93_RS13880 PF00158 Sigma-54 interaction domain FFE93_RS13885 PF02653 Branched-chain amino acid transport system / permease component FFE93_RS13890 PF00005 ABC transporter FFE93_RS13895 PF13407 Periplasmic binding protein domain FFE93_RS13900 PF00356 Bacterial regulatory proteins, lacI family FFE93_RS13905 PF04235 Protein of unknown function (DUF418) FFE93_RS13910 PF01227 GTP cyclohydrolase I FFE93_RS13915 PF06779 Uncharacterised MFS-type transporter YbfB FFE93_RS13920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFE93_RS13920 PF03466 LysR substrate binding domain FFE93_RS13925 PF00107 Zinc-binding dehydrogenase FFE93_RS13925 PF08240 Alcohol dehydrogenase GroES-like domain FFE93_RS13930 PF00756 Putative esterase FFE93_RS13950 PF00005 ABC transporter FFE93_RS13965 PF03454 MoeA C-terminal region (domain IV) FFE93_RS13965 PF00994 Probable molybdopterin binding domain FFE93_RS13965 PF03453 MoeA N-terminal region (domain I and II) FFE93_RS13970 PF00899 ThiF family FFE93_RS13975 PF00005 ABC transporter FFE93_RS13975 PF12848 ABC transporter FFE93_RS13995 PF13505 Outer membrane protein beta-barrel domain FFE93_RS14000 PF00892 EamA-like transporter family FFE93_RS14010 PF02469 Fasciclin domain FFE93_RS14030 PF00210 Ferritin-like domain FFE93_RS14035 PF01258 Prokaryotic dksA/traR C4-type zinc finger FFE93_RS14040 PF00497 Bacterial extracellular solute-binding proteins, family 3 FFE93_RS14045 PF00528 Binding-protein-dependent transport system inner membrane component FFE93_RS14050 PF00005 ABC transporter FFE93_RS14055 PF05971 RNA methyltransferase FFE93_RS14070 PF02885 Glycosyl transferase family, helical bundle domain FFE93_RS14075 PF00230 Major intrinsic protein FFE93_RS14080 PF06733 DEAD_2 FFE93_RS14080 PF13307 Helicase C-terminal domain FFE93_RS14085 PF00267 Gram-negative porin FFE93_RS14095 PF00892 EamA-like transporter family FFE93_RS14105 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain FFE93_RS14105 PF01276 Orn/Lys/Arg decarboxylase, major domain FFE93_RS14105 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain FFE93_RS14110 PF13520 Amino acid permease FFE93_RS14115 PF00528 Binding-protein-dependent transport system inner membrane component FFE93_RS14120 PF00005 ABC transporter FFE93_RS14125 PF00528 Binding-protein-dependent transport system inner membrane component FFE93_RS14130 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FFE93_RS14135 PF00232 Glycosyl hydrolase family 1 FFE93_RS14140 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FFE93_RS14140 PF02378 Phosphotransferase system, EIIC FFE93_RS14140 PF00367 phosphotransferase system, EIIB FFE93_RS14145 PF01418 Helix-turn-helix domain, rpiR family FFE93_RS14145 PF01380 SIS domain FFE93_RS14150 PF13542 Helix-turn-helix domain of transposase family ISL3 FFE93_RS14150 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 FFE93_RS14150 PF01610 Transposase FFE93_RS14155 PF06183 DinI-like family FFE93_RS14160 PF01278 Omptin family FFE93_RS14165 PF02743 Cache domain FFE93_RS14165 PF00672 HAMP domain FFE93_RS14165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FFE93_RS14170 PF12706 Beta-lactamase superfamily domain FFE93_RS14180 PF00144 Beta-lactamase FFE93_RS14195 PF00267 Gram-negative porin FFE93_RS14205 PF07690 Major Facilitator Superfamily FFE93_RS14210 PF16359 RcsD-ABL domain FFE93_RS14210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFE93_RS14210 PF01627 Hpt domain FFE93_RS14215 PF00196 Bacterial regulatory proteins, luxR family FFE93_RS14215 PF00072 Response regulator receiver domain FFE93_RS14220 PF09456 RcsC Alpha-Beta-Loop (ABL) FFE93_RS14220 PF00512 His Kinase A (phospho-acceptor) domain FFE93_RS14220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFE93_RS14220 PF00072 Response regulator receiver domain FFE93_RS14225 PF00521 DNA gyrase/topoisomerase IV, subunit A FFE93_RS14225 PF03989 DNA gyrase C-terminal domain, beta-propeller FFE93_RS14235 PF02867 Ribonucleotide reductase, barrel domain FFE93_RS14235 PF03477 ATP cone domain FFE93_RS14235 PF00317 Ribonucleotide reductase, all-alpha domain FFE93_RS14240 PF00268 Ribonucleotide reductase, small chain FFE93_RS14245 PF00111 2Fe-2S iron-sulfur cluster binding domain FFE93_RS14250 PF03974 Ecotin FFE93_RS14255 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) FFE93_RS14255 PF06594 Haemolysin-type calcium binding protein related domain FFE93_RS14275 PF00994 Probable molybdopterin binding domain FFE93_RS14280 PF03222 Tryptophan/tyrosine permease family FFE93_RS14285 PF07437 YfaZ precursor FFE93_RS14290 PF00199 Catalase FFE93_RS14290 PF06628 Catalase-related immune-responsive FFE93_RS14295 PF13193 AMP-binding enzyme C-terminal domain FFE93_RS14295 PF00501 AMP-binding enzyme FFE93_RS14300 PF13378 Enolase C-terminal domain-like FFE93_RS14305 PF00378 Enoyl-CoA hydratase/isomerase FFE93_RS14310 PF12697 Alpha/beta hydrolase family FFE93_RS14315 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FFE93_RS14315 PF16582 Middle domain of thiamine pyrophosphate FFE93_RS14315 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FFE93_RS14320 PF00425 chorismate binding enzyme FFE93_RS14330 PF03797 Autotransporter beta-domain FFE93_RS14330 PF13018 Extended Signal Peptide of Type V secretion system FFE93_RS14330 PF02395 Immunoglobulin A1 protease FFE93_RS14335 PF05957 Bacterial protein of unknown function (DUF883) FFE93_RS14340 PF00920 Dehydratase family FFE93_RS14345 PF03928 Haem-degrading FFE93_RS14350 PF07690 Major Facilitator Superfamily FFE93_RS14355 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FFE93_RS14355 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FFE93_RS14360 PF00356 Bacterial regulatory proteins, lacI family FFE93_RS14365 PF00106 short chain dehydrogenase FFE93_RS14370 PF01202 Shikimate kinase FFE93_RS14380 PF06496 Protein of unknown function (DUF1097) FFE93_RS14385 PF00361 Proton-conducting membrane transporter FFE93_RS14390 PF00361 Proton-conducting membrane transporter FFE93_RS14395 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FFE93_RS14395 PF00361 Proton-conducting membrane transporter FFE93_RS14400 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FFE93_RS14405 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 FFE93_RS14410 PF12838 4Fe-4S dicluster domain FFE93_RS14415 PF00146 NADH dehydrogenase FFE93_RS14420 PF00384 Molybdopterin oxidoreductase FFE93_RS14420 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FFE93_RS14420 PF01568 Molydopterin dinucleotide binding domain FFE93_RS14420 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FFE93_RS14425 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FFE93_RS14425 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FFE93_RS14425 PF10531 SLBB domain FFE93_RS14435 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FFE93_RS14435 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FFE93_RS14440 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FFE93_RS14445 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 FFE93_RS14450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFE93_RS14450 PF03466 LysR substrate binding domain FFE93_RS14455 PF00155 Aminotransferase class I and II FFE93_RS14470 PF02080 TrkA-C domain FFE93_RS14470 PF03600 Citrate transporter FFE93_RS14480 PF13419 Haloacid dehalogenase-like hydrolase FFE93_RS14485 PF03887 YfbU domain FFE93_RS14490 PF04217 Protein of unknown function, DUF412 FFE93_RS14495 PF00871 Acetokinase family FFE93_RS14500 PF07085 DRTGG domain FFE93_RS14500 PF01515 Phosphate acetyl/butaryl transferase FFE93_RS14505 PF00356 Bacterial regulatory proteins, lacI family FFE93_RS14505 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FFE93_RS14510 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FFE93_RS14520 PF03611 PTS system sugar-specific permease component FFE93_RS14525 PF03459 TOBE domain FFE93_RS14525 PF00005 ABC transporter FFE93_RS14530 PF00528 Binding-protein-dependent transport system inner membrane component FFE93_RS14540 PF10766 Multidrug efflux pump-associated protein AcrZ FFE93_RS14545 PF03459 TOBE domain FFE93_RS14545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFE93_RS14550 PF00005 ABC transporter FFE93_RS14560 PF16363 GDP-mannose 4,6 dehydratase FFE93_RS14565 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain FFE93_RS14565 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain FFE93_RS14570 PF10509 Galactokinase galactose-binding signature FFE93_RS14570 PF08544 GHMP kinases C terminal FFE93_RS14570 PF00288 GHMP kinases N terminal domain FFE93_RS14575 PF01263 Aldose 1-epimerase FFE93_RS14580 PF07769 psiF repeat FFE93_RS14585 PF00300 Histidine phosphatase superfamily (branch 1) FFE93_RS14590 PF00793 DAHP synthetase I family FFE93_RS14595 PF01545 Cation efflux family FFE93_RS14600 PF04973 Nicotinamide mononucleotide transporter FFE93_RS14605 PF02445 Quinolinate synthetase A protein FFE93_RS14635 PF16331 TolA binding protein trimerisation FFE93_RS14635 PF13174 Tetratricopeptide repeat FFE93_RS14640 PF00691 OmpA family FFE93_RS14645 PF04052 TolB amino-terminal domain FFE93_RS14645 PF07676 WD40-like Beta Propeller Repeat FFE93_RS14650 PF06519 TolA C-terminal FFE93_RS14650 PF06519 TolA C-terminal FFE93_RS14655 PF02472 Biopolymer transport protein ExbD/TolR FFE93_RS14660 PF01618 MotA/TolQ/ExbB proton channel family FFE93_RS14665 PF03061 Thioesterase superfamily FFE93_RS14670 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) FFE93_RS14675 PF08173 Membrane bound YbgT-like protein FFE93_RS14680 PF02322 Cytochrome bd terminal oxidase subunit II FFE93_RS14685 PF01654 Cytochrome bd terminal oxidase subunit I FFE93_RS14690 PF02872 5'-nucleotidase, C-terminal domain FFE93_RS14690 PF00149 Calcineurin-like phosphoesterase FFE93_RS14695 PF02629 CoA binding domain FFE93_RS14695 PF00549 CoA-ligase FFE93_RS14700 PF00549 CoA-ligase FFE93_RS14700 PF08442 ATP-grasp domain FFE93_RS14705 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FFE93_RS14705 PF00364 Biotin-requiring enzyme FFE93_RS14705 PF02817 e3 binding domain FFE93_RS14710 PF16078 2-oxoglutarate dehydrogenase N-terminus FFE93_RS14710 PF00676 Dehydrogenase E1 component FFE93_RS14710 PF02779 Transketolase, pyrimidine binding domain FFE93_RS14710 PF16870 2-oxoglutarate dehydrogenase C-terminal FFE93_RS14715 PF13085 2Fe-2S iron-sulfur cluster binding domain FFE93_RS14720 PF02910 Fumarate reductase flavoprotein C-term FFE93_RS14720 PF00890 FAD binding domain FFE93_RS14725 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FFE93_RS14730 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FFE93_RS14735 PF00285 Citrate synthase, C-terminal domain FFE93_RS14745 PF01470 Pyroglutamyl peptidase FFE93_RS14760 PF03746 LamB/YcsF family FFE93_RS14765 PF02626 Carboxyltransferase domain, subdomain A and B FFE93_RS14770 PF02682 Carboxyltransferase domain, subdomain C and D FFE93_RS14775 PF01784 NIF3 (NGG1p interacting factor 3) FFE93_RS14780 PF02112 cAMP phosphodiesterases class-II FFE93_RS14785 PF03441 FAD binding domain of DNA photolyase FFE93_RS14785 PF00875 DNA photolyase FFE93_RS14790 PF08349 Protein of unknown function (DUF1722) FFE93_RS14795 PF10725 Protein of unknown function (DUF2517) FFE93_RS14800 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) FFE93_RS14805 PF03814 Potassium-transporting ATPase A subunit FFE93_RS14815 PF02669 K+-transporting ATPase, c chain FFE93_RS14820 PF00512 His Kinase A (phospho-acceptor) domain FFE93_RS14820 PF13493 Domain of unknown function (DUF4118) FFE93_RS14820 PF13492 GAF domain FFE93_RS14820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFE93_RS14820 PF02702 Osmosensitive K+ channel His kinase sensor domain FFE93_RS14825 PF00072 Response regulator receiver domain FFE93_RS14825 PF00486 Transcriptional regulatory protein, C terminal FFE93_RS14845 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FFE93_RS14845 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FFE93_RS14845 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FFE93_RS14845 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FFE93_RS14850 PF03925 SeqA protein C-terminal domain FFE93_RS14850 PF17206 SeqA protein N-terminal domain FFE93_RS14855 PF12697 Alpha/beta hydrolase family FFE93_RS14860 PF01402 Ribbon-helix-helix protein, copG family FFE93_RS14865 PF00672 HAMP domain FFE93_RS14865 PF02203 Tar ligand binding domain homologue FFE93_RS14865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FFE93_RS14870 PF00258 Flavodoxin FFE93_RS14875 PF01475 Ferric uptake regulator family FFE93_RS14880 PF02838 Glycosyl hydrolase family 20, domain 2 FFE93_RS14880 PF00728 Glycosyl hydrolase family 20, catalytic domain FFE93_RS14880 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain FFE93_RS14880 PF03173 Putative carbohydrate binding domain FFE93_RS14885 PF13982 YbfN-like lipoprotein FFE93_RS14890 PF03573 outer membrane porin, OprD family FFE93_RS14895 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain FFE93_RS14895 PF00749 tRNA synthetases class I (E and Q), catalytic domain FFE93_RS14900 PF02378 Phosphotransferase system, EIIC FFE93_RS14900 PF00367 phosphotransferase system, EIIB FFE93_RS14900 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FFE93_RS14905 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase FFE93_RS14910 PF01979 Amidohydrolase family FFE93_RS14915 PF00480 ROK family FFE93_RS14915 PF01047 MarR family FFE93_RS14920 PF13344 Haloacid dehalogenase-like hydrolase FFE93_RS14925 PF00733 Asparagine synthase FFE93_RS14925 PF13537 Glutamine amidotransferase domain FFE93_RS14960 PF01494 FAD binding domain FFE93_RS14965 PF04055 Radical SAM superfamily FFE93_RS14965 PF01938 TRAM domain FFE93_RS14965 PF00919 Uncharacterized protein family UPF0004 FFE93_RS14970 PF02562 PhoH-like protein FFE93_RS14975 PF02130 Uncharacterized protein family UPF0054 FFE93_RS14980 PF03471 Transporter associated domain FFE93_RS14980 PF00571 CBS domain FFE93_RS14985 PF00795 Carbon-nitrogen hydrolase FFE93_RS15000 PF00497 Bacterial extracellular solute-binding proteins, family 3 FFE93_RS15005 PF00528 Binding-protein-dependent transport system inner membrane component FFE93_RS15010 PF00528 Binding-protein-dependent transport system inner membrane component FFE93_RS15015 PF00005 ABC transporter FFE93_RS15020 PF07295 Zinc-ribbon containing domain FFE93_RS15025 PF08264 Anticodon-binding domain of tRNA FFE93_RS15025 PF13603 Leucyl-tRNA synthetase, Domain 2 FFE93_RS15025 PF00133 tRNA synthetases class I (I, L, M and V) FFE93_RS15030 PF04390 Lipopolysaccharide-assembly FFE93_RS15035 PF06144 DNA polymerase III, delta subunit FFE93_RS15035 PF14840 Processivity clamp loader gamma complex DNA pol III C-term FFE93_RS15040 PF01467 Cytidylyltransferase-like FFE93_RS15050 PF02590 Predicted SPOUT methyltransferase FFE93_RS15055 PF00905 Penicillin binding protein transpeptidase domain FFE93_RS15055 PF03717 Penicillin-binding Protein dimerisation domain FFE93_RS15060 PF01098 Cell cycle protein FFE93_RS15065 PF05036 Sporulation related domain FFE93_RS15065 PF03330 Lytic transglycolase FFE93_RS15070 PF07943 Penicillin-binding protein 5, C-terminal domain FFE93_RS15070 PF00768 D-alanyl-D-alanine carboxypeptidase FFE93_RS15075 PF04359 Protein of unknown function (DUF493) FFE93_RS15080 PF03099 Biotin/lipoate A/B protein ligase family FFE93_RS15085 PF04055 Radical SAM superfamily FFE93_RS15085 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family FFE93_RS15090 PF02416 mttA/Hcf106 family FFE93_RS15095 PF05230 MASE2 domain FFE93_RS15095 PF00990 Diguanylate cyclase, GGDEF domain FFE93_RS15100 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FFE93_RS15105 PF00313 'Cold-shock' DNA-binding domain FFE93_RS15110 PF00313 'Cold-shock' DNA-binding domain FFE93_RS15115 PF00196 Bacterial regulatory proteins, luxR family FFE93_RS15125 PF00149 Calcineurin-like phosphoesterase FFE93_RS15140 PF00664 ABC transporter transmembrane region FFE93_RS15140 PF00005 ABC transporter FFE93_RS15145 PF08007 Cupin superfamily protein FFE93_RS15150 PF13408 Recombinase zinc beta ribbon domain FFE93_RS15150 PF00239 Resolvase, N terminal domain FFE93_RS15150 PF07508 Recombinase FFE93_RS15180 PF02413 Caudovirales tail fibre assembly protein, lambda gpK FFE93_RS15185 PF07484 Phage Tail Collar Domain FFE93_RS15235 PF17482 Phage tail sheath C-terminal domain FFE93_RS15235 PF04984 Phage tail sheath protein subtilisin-like domain FFE93_RS15335 PF06530 Phage antitermination protein Q FFE93_RS15400 PF00589 Phage integrase family FFE93_RS15400 PF14659 Phage integrase, N-terminal SAM-like domain FFE93_RS15400 PF13356 Arm DNA-binding domain FFE93_RS15410 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FFE93_RS15410 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FFE93_RS15420 PF01406 tRNA synthetases class I (C) catalytic domain FFE93_RS15420 PF09190 DALR domain FFE93_RS15425 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FFE93_RS15430 PF00149 Calcineurin-like phosphoesterase FFE93_RS15435 PF00731 AIR carboxylase FFE93_RS15440 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain FFE93_RS15440 PF02222 ATP-grasp domain FFE93_RS15450 PF00005 ABC transporter FFE93_RS15455 PF13472 GDSL-like Lipase/Acylhydrolase family FFE93_RS15460 PF00106 short chain dehydrogenase FFE93_RS15465 PF00085 Thioredoxin FFE93_RS15470 PF01145 SPFH domain / Band 7 family FFE93_RS15470 PF16200 C-terminal region of band_7 FFE93_RS15475 PF01957 NfeD-like C-terminal, partner-binding FFE93_RS15480 PF13411 MerR HTH family regulatory protein FFE93_RS15485 PF00403 Heavy-metal-associated domain FFE93_RS15490 PF01963 TraB family FFE93_RS15495 PF04073 Aminoacyl-tRNA editing domain FFE93_RS15515 PF02872 5'-nucleotidase, C-terminal domain FFE93_RS15515 PF00149 Calcineurin-like phosphoesterase FFE93_RS15520 PF07690 Major Facilitator Superfamily FFE93_RS15525 PF00999 Sodium/hydrogen exchanger family FFE93_RS15525 PF02254 TrkA-N domain FFE93_RS15530 PF00294 pfkB family carbohydrate kinase FFE93_RS15535 PF02706 Chain length determinant protein FFE93_RS15540 PF16363 GDP-mannose 4,6 dehydratase FFE93_RS15545 PF13439 Glycosyltransferase Family 4 FFE93_RS15545 PF00534 Glycosyl transferases group 1 FFE93_RS15550 PF01370 NAD dependent epimerase/dehydratase family FFE93_RS15580 PF13737 Transposase DDE domain FFE93_RS15590 PF00762 Ferrochelatase FFE93_RS15595 PF05191 Adenylate kinase, active site lid FFE93_RS15600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFE93_RS15600 PF00183 Hsp90 protein FFE93_RS15605 PF02132 RecR protein FFE93_RS15605 PF13662 Toprim domain FFE93_RS15610 PF02575 YbaB/EbfC DNA-binding family FFE93_RS15615 PF12169 DNA polymerase III subunits gamma and tau domain III FFE93_RS15615 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding FFE93_RS15615 PF12170 DNA polymerase III tau subunit V interacting with alpha FFE93_RS15620 PF00156 Phosphoribosyl transferase domain FFE93_RS15625 PF04304 Protein of unknown function (DUF454) FFE93_RS15635 PF10689 Protein of unknown function (DUF2496) FFE93_RS15640 PF12795 Mechanosensitive ion channel porin domain FFE93_RS15640 PF12794 Mechanosensitive ion channel inner membrane domain 1 FFE93_RS15640 PF00924 Mechanosensitive ion channel FFE93_RS15645 PF02635 DsrE/DsrF-like family FFE93_RS15650 PF08361 MAATS-type transcriptional repressor, C-terminal region FFE93_RS15650 PF00440 Bacterial regulatory proteins, tetR family FFE93_RS15655 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FFE93_RS15655 PF00529 HlyD membrane-fusion protein of T1SS FFE93_RS15660 PF00873 AcrB/AcrD/AcrF family FFE93_RS15670 PF01168 Alanine racemase, N-terminal domain FFE93_RS15675 PF01676 Metalloenzyme superfamily FFE93_RS15680 PF01197 Ribosomal protein L31 FFE93_RS15685 PF00444 Ribosomal protein L36 FFE93_RS15690 PF01297 Zinc-uptake complex component A periplasmic FFE93_RS15695 PF00950 ABC 3 transport family FFE93_RS15700 PF00005 ABC transporter FFE93_RS15710 PF10757 Biofilm formation regulator YbaJ FFE93_RS15715 PF05321 Haemolysin expression modulating protein FFE93_RS15725 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FFE93_RS15730 PF09619 Type III secretion system lipoprotein chaperone (YscW) FFE93_RS15740 PF00909 Ammonium Transporter Family FFE93_RS15745 PF00543 Nitrogen regulatory protein P-II FFE93_RS15750 PF00664 ABC transporter transmembrane region FFE93_RS15750 PF00005 ABC transporter FFE93_RS15755 PF00005 ABC transporter FFE93_RS15755 PF00664 ABC transporter transmembrane region FFE93_RS15760 PF01037 Lrp/AsnC ligand binding domain FFE93_RS15760 PF13404 AsnC-type helix-turn-helix domain FFE93_RS15775 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FFE93_RS15775 PF12793 Sugar transport-related sRNA regulator N-term FFE93_RS15780 PF06508 Queuosine biosynthesis protein QueC FFE93_RS15795 PF13145 PPIC-type PPIASE domain FFE93_RS15800 PF00216 Bacterial DNA-binding protein FFE93_RS15805 PF00004 ATPase family associated with various cellular activities (AAA) FFE93_RS15805 PF05362 Lon protease (S16) C-terminal proteolytic domain FFE93_RS15805 PF02190 ATP-dependent protease La (LON) substrate-binding domain FFE93_RS15810 PF07724 AAA domain (Cdc48 subfamily) FFE93_RS15810 PF10431 C-terminal, D2-small domain, of ClpB protein FFE93_RS15810 PF06689 ClpX C4-type zinc finger FFE93_RS15815 PF00574 Clp protease FFE93_RS15820 PF05697 Bacterial trigger factor protein (TF) FFE93_RS15820 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FFE93_RS15820 PF05698 Bacterial trigger factor protein (TF) C-terminus FFE93_RS15830 PF01722 BolA-like protein FFE93_RS15835 PF03923 Uncharacterized lipoprotein FFE93_RS15835 PF08139 Prokaryotic membrane lipoprotein lipid attachment site FFE93_RS15840 PF07690 Major Facilitator Superfamily FFE93_RS15845 PF03502 Nucleoside-specific channel-forming protein, Tsx FFE93_RS15850 PF06481 COX Aromatic Rich Motif FFE93_RS15850 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FFE93_RS15855 PF00115 Cytochrome C and Quinol oxidase polypeptide I FFE93_RS15860 PF00510 Cytochrome c oxidase subunit III FFE93_RS15865 PF03626 Prokaryotic Cytochrome C oxidase subunit IV FFE93_RS15870 PF01040 UbiA prenyltransferase family FFE93_RS15875 PF07690 Major Facilitator Superfamily FFE93_RS15880 PF04461 Protein of unknown function (DUF520) FFE93_RS15885 PF02558 Ketopantoate reductase PanE/ApbA FFE93_RS15885 PF08546 Ketopantoate reductase PanE/ApbA C terminal FFE93_RS15890 PF01965 DJ-1/PfpI family FFE93_RS15895 PF02926 THUMP domain FFE93_RS15895 PF02568 Thiamine biosynthesis protein (ThiI) FFE93_RS15900 PF02609 Exonuclease VII small subunit FFE93_RS15905 PF00348 Polyprenyl synthetase FFE93_RS15910 PF02779 Transketolase, pyrimidine binding domain FFE93_RS15910 PF02780 Transketolase, C-terminal domain FFE93_RS15910 PF13292 1-deoxy-D-xylulose-5-phosphate synthase FFE93_RS15915 PF04608 Phosphatidylglycerophosphatase A FFE93_RS15920 PF00586 AIR synthase related protein, N-terminal domain FFE93_RS15920 PF02769 AIR synthase related protein, C-terminal domain FFE93_RS15925 PF01029 NusB family FFE93_RS15930 PF00885 6,7-dimethyl-8-ribityllumazine synthase FFE93_RS15935 PF01872 RibD C-terminal domain FFE93_RS15935 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FFE93_RS15940 PF03477 ATP cone domain FFE93_RS15950 PF02355 Protein export membrane protein FFE93_RS15950 PF07549 SecD/SecF GG Motif FFE93_RS15955 PF13721 SecD export protein N-terminal TM region FFE93_RS15955 PF07549 SecD/SecF GG Motif FFE93_RS15955 PF02355 Protein export membrane protein FFE93_RS15960 PF02699 Preprotein translocase subunit FFE93_RS15965 PF01702 Queuine tRNA-ribosyltransferase FFE93_RS15970 PF01040 UbiA prenyltransferase family FFE93_RS16070 PF03245 Bacteriophage Rz lysis protein FFE93_RS16090 PF05866 Endodeoxyribonuclease RusA FFE93_RS16095 PF07102 Protein of unknown function (DUF1364) FFE93_RS16265 PF00589 Phage integrase family FFE93_RS16270 PF02547 Queuosine biosynthesis protein FFE93_RS16275 PF04336 Acyl carrier protein phosphodiesterase FFE93_RS16280 PF10417 C-terminal domain of 1-Cys peroxiredoxin FFE93_RS16280 PF00578 AhpC/TSA family FFE93_RS16285 PF01848 Hok/gef family FFE93_RS16300 PF02903 Alpha amylase, N-terminal ig-like domain FFE93_RS16300 PF00128 Alpha amylase, catalytic domain FFE93_RS16305 PF00324 Amino acid permease FFE93_RS16310 PF05525 Branched-chain amino acid transport protein FFE93_RS16315 PF12849 PBP superfamily domain FFE93_RS16320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFE93_RS16320 PF00512 His Kinase A (phospho-acceptor) domain FFE93_RS16320 PF11808 Phosphate regulon sensor protein PhoR FFE93_RS16320 PF00989 PAS fold FFE93_RS16325 PF00072 Response regulator receiver domain FFE93_RS16325 PF00486 Transcriptional regulatory protein, C terminal FFE93_RS16330 PF00149 Calcineurin-like phosphoesterase FFE93_RS16330 PF12320 Type 5 capsule protein repressor C-terminal domain FFE93_RS16335 PF13476 AAA domain FFE93_RS16340 PF00480 ROK family FFE93_RS16345 PF04381 Putative exonuclease, RdgC FFE93_RS16350 PF06865 Pyrimidine/purine nucleoside phosphorylase FFE93_RS16355 PF01202 Shikimate kinase FFE93_RS16395 PF07238 PilZ domain FFE93_RS16395 PF07317 Flagellar regulator YcgR FFE93_RS16400 PF00171 Aldehyde dehydrogenase family FFE93_RS16405 PF00696 Amino acid kinase family FFE93_RS16405 PF01472 PUA domain FFE93_RS16410 PF07417 Sigma factor-binding transcriptional regulator Crl FFE93_RS16415 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) FFE93_RS16420 PF00156 Phosphoribosyl transferase domain FFE93_RS16425 PF01546 Peptidase family M20/M25/M40 FFE93_RS16425 PF07687 Peptidase dimerisation domain FFE93_RS16430 PF11799 impB/mucB/samB family C-terminal domain FFE93_RS16430 PF00817 impB/mucB/samB family FFE93_RS16430 PF11798 IMS family HHH motif FFE93_RS16435 PF03009 Glycerophosphoryl diester phosphodiesterase family FFE93_RS16440 PF04400 (Na+)-NQR maturation NqrM FFE93_RS16445 PF02424 ApbE family FFE93_RS16450 PF00175 Oxidoreductase NAD-binding domain FFE93_RS16450 PF00970 Oxidoreductase FAD-binding domain FFE93_RS16450 PF00111 2Fe-2S iron-sulfur cluster binding domain FFE93_RS16455 PF02508 Rnf-Nqr subunit, membrane protein FFE93_RS16460 PF02508 Rnf-Nqr subunit, membrane protein FFE93_RS16465 PF04205 FMN-binding domain FFE93_RS16470 PF03116 NQR2, RnfD, RnfE family FFE93_RS16475 PF11973 NQRA C-terminal domain FFE93_RS16475 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) FFE93_RS16480 PF03734 L,D-transpeptidase catalytic domain FFE93_RS16485 PF13230 Glutamine amidotransferases class-II FFE93_RS16490 PF13580 SIS domain FFE93_RS16495 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FFE93_RS16495 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FFE93_RS16495 PF09317 Domain of unknown function (DUF1974) FFE93_RS16500 PF18071 HMW1C N-terminal FFE93_RS16500 PF18254 HMW1 domain 2 FFE93_RS16505 PF05860 haemagglutination activity domain FFE93_RS16510 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB FFE93_RS16510 PF08479 POTRA domain, ShlB-type FFE93_RS16515 PF01636 Phosphotransferase enzyme family FFE93_RS16520 PF01008 Initiation factor 2 subunit family FFE93_RS16525 PF03079 ARD/ARD' family FFE93_RS16535 PF00596 Class II Aldolase and Adducin N-terminal domain FFE93_RS16540 PF00155 Aminotransferase class I and II FFE93_RS16545 PF00795 Carbon-nitrogen hydrolase FFE93_RS16550 PF07690 Major Facilitator Superfamily FFE93_RS16555 PF03591 AzlC protein FFE93_RS16560 PF05437 Branched-chain amino acid transport protein (AzlD) FFE93_RS16565 PF01047 MarR family FFE93_RS16570 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FFE93_RS16570 PF00529 HlyD membrane-fusion protein of T1SS FFE93_RS16575 PF07690 Major Facilitator Superfamily FFE93_RS16580 PF00588 SpoU rRNA Methylase family FFE93_RS16580 PF08032 RNA 2'-O ribose methyltransferase substrate binding FFE93_RS16585 PF00085 Thioredoxin FFE93_RS16590 PF03942 DTW domain FFE93_RS16595 PF13607 Succinyl-CoA ligase like flavodoxin domain FFE93_RS16595 PF13380 CoA binding domain FFE93_RS16595 PF00583 Acetyltransferase (GNAT) family FFE93_RS16600 PF13091 PLD-like domain FFE93_RS16640 PF10431 C-terminal, D2-small domain, of ClpB protein FFE93_RS16640 PF00004 ATPase family associated with various cellular activities (AAA) FFE93_RS16640 PF17871 AAA lid domain FFE93_RS16640 PF02861 Clp amino terminal domain, pathogenicity island component FFE93_RS16640 PF07724 AAA domain (Cdc48 subfamily) FFE93_RS16645 PF02578 Multi-copper polyphenol oxidoreductase laccase FFE93_RS16650 PF01479 S4 domain FFE93_RS16650 PF00849 RNA pseudouridylate synthase FFE93_RS16660 PF13525 Outer membrane lipoprotein FFE93_RS16665 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FFE93_RS16670 PF00800 Prephenate dehydratase FFE93_RS16670 PF01817 Chorismate mutase type II FFE93_RS16675 PF02153 Prephenate dehydrogenase FFE93_RS16675 PF01817 Chorismate mutase type II FFE93_RS16680 PF00793 DAHP synthetase I family FFE93_RS16685 PF04397 LytTr DNA-binding domain FFE93_RS16685 PF00072 Response regulator receiver domain FFE93_RS16690 PF03605 Anaerobic c4-dicarboxylate membrane transporter FFE93_RS16695 PF04338 Protein of unknown function, DUF481 FFE93_RS16700 PF01245 Ribosomal protein L19 FFE93_RS16705 PF01746 tRNA (Guanine-1)-methyltransferase FFE93_RS16710 PF05239 PRC-barrel domain FFE93_RS16710 PF01782 RimM N-terminal domain FFE93_RS16715 PF00886 Ribosomal protein S16 FFE93_RS16720 PF00448 SRP54-type protein, GTPase domain FFE93_RS16720 PF02881 SRP54-type protein, helical bundle domain FFE93_RS16720 PF02978 Signal peptide binding domain FFE93_RS16725 PF01578 Cytochrome C assembly protein FFE93_RS16730 PF03471 Transporter associated domain FFE93_RS16730 PF01595 Cyclin M transmembrane N-terminal domain FFE93_RS16730 PF00571 CBS domain FFE93_RS16735 PF02664 S-Ribosylhomocysteinase (LuxS) FFE93_RS16740 PF04262 Glutamate-cysteine ligase FFE93_RS16745 PF09335 SNARE associated Golgi protein FFE93_RS16750 PF13419 Haloacid dehalogenase-like hydrolase FFE93_RS16785 PF02599 Global regulator protein family FFE93_RS16790 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FFE93_RS16790 PF02272 DHHA1 domain FFE93_RS16790 PF01411 tRNA synthetases class II (A) FFE93_RS16795 PF02631 RecX family FFE93_RS16800 PF00154 recA bacterial DNA recombination protein FFE93_RS16805 PF02464 Competence-damaged protein FFE93_RS16810 PF07690 Major Facilitator Superfamily FFE93_RS16825 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FFE93_RS16825 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FFE93_RS16830 PF02779 Transketolase, pyrimidine binding domain FFE93_RS16830 PF02780 Transketolase, C-terminal domain FFE93_RS16835 PF00456 Transketolase, thiamine diphosphate binding domain FFE93_RS16840 PF02653 Branched-chain amino acid transport system / permease component FFE93_RS16845 PF00005 ABC transporter FFE93_RS16855 PF13407 Periplasmic binding protein domain FFE93_RS16870 PF02613 Nitrate reductase delta subunit FFE93_RS16875 PF04976 DMSO reductase anchor subunit (DmsC) FFE93_RS16880 PF12800 4Fe-4S binding domain FFE93_RS16880 PF13247 4Fe-4S dicluster domain FFE93_RS16885 PF00384 Molybdopterin oxidoreductase FFE93_RS16885 PF01568 Molydopterin dinucleotide binding domain FFE93_RS16885 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FFE93_RS16890 PF00465 Iron-containing alcohol dehydrogenase FFE93_RS16895 PF00596 Class II Aldolase and Adducin N-terminal domain FFE93_RS16900 PF07690 Major Facilitator Superfamily FFE93_RS16905 PF02952 L-fucose isomerase, C-terminal domain FFE93_RS16905 PF07881 L-fucose isomerase, first N-terminal domain FFE93_RS16905 PF07882 L-fucose isomerase, second N-terminal domain FFE93_RS16910 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FFE93_RS16910 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FFE93_RS16915 PF05025 RbsD / FucU transport protein family FFE93_RS16920 PF00455 DeoR C terminal sensor domain FFE93_RS16920 PF08220 DeoR-like helix-turn-helix domain FFE93_RS16925 PF05683 Fumarase C-terminus FFE93_RS16925 PF05681 Fumarate hydratase (Fumerase) FFE93_RS16930 PF01022 Bacterial regulatory protein, arsR family FFE93_RS16935 PF00679 Elongation factor G C-terminus FFE93_RS16935 PF00009 Elongation factor Tu GTP binding domain FFE93_RS16935 PF03144 Elongation factor Tu domain 2 FFE93_RS16935 PF03764 Elongation factor G, domain IV FFE93_RS16935 PF14492 Elongation Factor G, domain II FFE93_RS16950 PF01546 Peptidase family M20/M25/M40 FFE93_RS16955 PF00005 ABC transporter FFE93_RS16960 PF00528 Binding-protein-dependent transport system inner membrane component FFE93_RS16965 PF00528 Binding-protein-dependent transport system inner membrane component FFE93_RS16970 PF00497 Bacterial extracellular solute-binding proteins, family 3 FFE93_RS16975 PF00005 ABC transporter FFE93_RS16975 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FFE93_RS16980 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FFE93_RS16980 PF00005 ABC transporter FFE93_RS16985 PF00528 Binding-protein-dependent transport system inner membrane component FFE93_RS16985 PF12911 N-terminal TM domain of oligopeptide transport permease C FFE93_RS16990 PF00528 Binding-protein-dependent transport system inner membrane component FFE93_RS16995 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FFE93_RS17000 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FFE93_RS17000 PF13378 Enolase C-terminal domain-like FFE93_RS17020 PF00109 Beta-ketoacyl synthase, N-terminal domain FFE93_RS17020 PF02801 Beta-ketoacyl synthase, C-terminal domain FFE93_RS17025 PF02321 Outer membrane efflux protein FFE93_RS17030 PF00005 ABC transporter FFE93_RS17030 PF02687 FtsX-like permease family FFE93_RS17030 PF12704 MacB-like periplasmic core domain FFE93_RS17035 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FFE93_RS17040 PF00664 ABC transporter transmembrane region FFE93_RS17040 PF03412 Peptidase C39 family FFE93_RS17040 PF00005 ABC transporter FFE93_RS17070 PF00419 Fimbrial protein FFE93_RS17080 PF02753 Pili assembly chaperone PapD, C-terminal domain FFE93_RS17080 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FFE93_RS17085 PF13953 PapC C-terminal domain FFE93_RS17085 PF00577 Outer membrane usher protein FFE93_RS17085 PF13954 PapC N-terminal domain FFE93_RS17090 PF00419 Fimbrial protein FFE93_RS17095 PF00419 Fimbrial protein FFE93_RS17110 PF05188 MutS domain II FFE93_RS17110 PF01624 MutS domain I FFE93_RS17110 PF05190 MutS family domain IV FFE93_RS17110 PF05192 MutS domain III FFE93_RS17110 PF00488 MutS domain V FFE93_RS17115 PF00140 Sigma-70 factor, region 1.2 FFE93_RS17115 PF04542 Sigma-70 region 2 FFE93_RS17115 PF04539 Sigma-70 region 3 FFE93_RS17115 PF04545 Sigma-70, region 4 FFE93_RS17120 PF01476 LysM domain FFE93_RS17120 PF01551 Peptidase family M23 FFE93_RS17130 PF01975 Survival protein SurE FFE93_RS17135 PF01142 tRNA pseudouridine synthase D (TruD) FFE93_RS17140 PF02542 YgbB family FFE93_RS17145 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase FFE93_RS17150 PF04977 Septum formation initiator FFE93_RS17155 PF04198 Putative sugar-binding domain FFE93_RS17160 PF02734 DAK2 domain FFE93_RS17165 PF02733 Dak1 domain FFE93_RS17175 PF07690 Major Facilitator Superfamily FFE93_RS17180 PF00107 Zinc-binding dehydrogenase FFE93_RS17180 PF08240 Alcohol dehydrogenase GroES-like domain FFE93_RS17185 PF02502 Ribose/Galactose Isomerase FFE93_RS17190 PF12084 Protein of unknown function (DUF3561) FFE93_RS17200 PF00009 Elongation factor Tu GTP binding domain FFE93_RS17205 PF01507 Phosphoadenosine phosphosulfate reductase family FFE93_RS17210 PF14824 Sirohaem biosynthesis protein central FFE93_RS17210 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FFE93_RS17210 PF10414 Sirohaem synthase dimerisation region FFE93_RS17215 PF04389 Peptidase family M28 FFE93_RS17220 PF01507 Phosphoadenosine phosphosulfate reductase family FFE93_RS17225 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FFE93_RS17225 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FFE93_RS17230 PF00175 Oxidoreductase NAD-binding domain FFE93_RS17230 PF00258 Flavodoxin FFE93_RS17230 PF00667 FAD binding domain FFE93_RS17235 PF01242 6-pyruvoyl tetrahydropterin synthase FFE93_RS17240 PF04055 Radical SAM superfamily FFE93_RS17245 PF00080 Copper/zinc superoxide dismutase (SODC) FFE93_RS17255 PF03952 Enolase, N-terminal domain FFE93_RS17255 PF00113 Enolase, C-terminal TIM barrel domain FFE93_RS17260 PF00117 Glutamine amidotransferase class-I FFE93_RS17260 PF06418 CTP synthase N-terminus FFE93_RS17265 PF03819 MazG nucleotide pyrophosphohydrolase domain FFE93_RS17270 PF02824 TGS domain FFE93_RS17270 PF04607 Region found in RelA / SpoT proteins FFE93_RS17270 PF13291 ACT domain FFE93_RS17275 PF01938 TRAM domain FFE93_RS17275 PF05958 tRNA (Uracil-5-)-methyltransferase FFE93_RS17280 PF00072 Response regulator receiver domain FFE93_RS17280 PF01627 Hpt domain FFE93_RS17280 PF00512 His Kinase A (phospho-acceptor) domain FFE93_RS17280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFE93_RS17280 PF00672 HAMP domain FFE93_RS17280 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FFE93_RS17285 PF00595 PDZ domain FFE93_RS17290 PF13286 Phosphohydrolase-associated domain FFE93_RS17290 PF01966 HD domain FFE93_RS17295 PF01048 Phosphorylase superfamily FFE93_RS17300 PF01497 Periplasmic binding protein FFE93_RS17305 PF03458 UPF0126 domain FFE93_RS17315 PF01521 Iron-sulphur cluster biosynthesis FFE93_RS17320 PF00654 Voltage gated chloride channel FFE93_RS17325 PF00202 Aminotransferase class-III FFE93_RS17335 PF01032 FecCD transport family FFE93_RS17340 PF01497 Periplasmic binding protein FFE93_RS17345 PF00005 ABC transporter FFE93_RS17350 PF00905 Penicillin binding protein transpeptidase domain FFE93_RS17350 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal FFE93_RS17350 PF00912 Transglycosylase FFE93_RS17350 PF14814 Bifunctional transglycosylase second domain FFE93_RS17355 PF08482 ATP-dependent helicase C-terminal FFE93_RS17355 PF00271 Helicase conserved C-terminal domain FFE93_RS17355 PF04408 Helicase associated domain (HA2) FFE93_RS17355 PF00270 DEAD/DEAH box helicase FFE93_RS17360 PF02834 LigT like Phosphoesterase FFE93_RS17365 PF03749 Sugar fermentation stimulation protein RE domain FFE93_RS17365 PF17746 SfsA N-terminal OB domain FFE93_RS17370 PF01258 Prokaryotic dksA/traR C4-type zinc finger FFE93_RS17375 PF00749 tRNA synthetases class I (E and Q), catalytic domain FFE93_RS17380 PF01743 Poly A polymerase head domain FFE93_RS17380 PF12627 Probable RNA and SrmB- binding site of polymerase A FFE93_RS17380 PF12626 Polymerase A arginine-rich C-terminus FFE93_RS17385 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FFE93_RS17390 PF02548 Ketopantoate hydroxymethyltransferase FFE93_RS17395 PF02569 Pantoate-beta-alanine ligase FFE93_RS17400 PF02261 Aspartate decarboxylase FFE93_RS17405 PF01522 Polysaccharide deacetylase FFE93_RS17410 PF01061 ABC-2 type transporter FFE93_RS17415 PF00005 ABC transporter FFE93_RS17420 PF00484 Carbonic anhydrase FFE93_RS17425 PF00156 Phosphoribosyl transferase domain FFE93_RS17430 PF00394 Multicopper oxidase FFE93_RS17430 PF07731 Multicopper oxidase FFE93_RS17430 PF07732 Multicopper oxidase FFE93_RS17430 PF10518 TAT (twin-arginine translocation) pathway signal sequence FFE93_RS17435 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) FFE93_RS17440 PF17284 Spermidine synthase tetramerisation domain FFE93_RS17445 PF02675 S-adenosylmethionine decarboxylase FFE93_RS17470 PF18624 CDI immunity protein FFE93_RS17500 PF00892 EamA-like transporter family FFE93_RS17505 PF06062 Uncharacterised protein family (UPF0231) FFE93_RS17510 PF11791 Aconitate B N-terminal domain FFE93_RS17510 PF00330 Aconitase family (aconitate hydratase) FFE93_RS17510 PF06434 Aconitate hydratase 2 N-terminus FFE93_RS17515 PF00593 TonB dependent receptor FFE93_RS17515 PF07715 TonB-dependent Receptor Plug Domain FFE93_RS17520 PF12833 Helix-turn-helix domain FFE93_RS17520 PF02311 AraC-like ligand binding domain FFE93_RS17525 PF07992 Pyridine nucleotide-disulphide oxidoreductase FFE93_RS17525 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FFE93_RS17530 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FFE93_RS17530 PF00364 Biotin-requiring enzyme FFE93_RS17530 PF02817 e3 binding domain FFE93_RS17535 PF00456 Transketolase, thiamine diphosphate binding domain FFE93_RS17535 PF17831 Pyruvate dehydrogenase E1 component middle domain FFE93_RS17545 PF07729 FCD domain FFE93_RS17545 PF00392 Bacterial regulatory proteins, gntR family FFE93_RS17550 PF00324 Amino acid permease FFE93_RS17555 PF17113 Regulatory signalling modulator protein AmpE FFE93_RS17560 PF01510 N-acetylmuramoyl-L-alanine amidase FFE93_RS17565 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain FFE93_RS17565 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain FFE93_RS17570 PF07963 Prokaryotic N-terminal methylation motif FFE93_RS17575 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain FFE93_RS17575 PF00437 Type II/IV secretion system protein FFE93_RS17580 PF00482 Type II secretion system (T2SS), protein F FFE93_RS17585 PF00478 IMP dehydrogenase / GMP reductase domain FFE93_RS17595 PF01121 Dephospho-CoA kinase FFE93_RS17600 PF07072 Cell division protein FFE93_RS17605 PF03884 DNA gyrase inhibitor YacG FFE93_RS17610 PF00293 NUDIX domain FFE93_RS17615 PF07516 SecA Wing and Scaffold domain FFE93_RS17615 PF07517 SecA DEAD-like domain FFE93_RS17615 PF02810 SEC-C motif FFE93_RS17615 PF01043 SecA preprotein cross-linking domain FFE93_RS17620 PF06558 Secretion monitor precursor protein (SecM) FFE93_RS17630 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase FFE93_RS17635 PF00091 Tubulin/FtsZ family, GTPase domain FFE93_RS17635 PF12327 FtsZ family, C-terminal domain FFE93_RS17640 PF02491 SHS2 domain inserted in FTSA FFE93_RS17645 PF08478 POTRA domain, FtsQ-type FFE93_RS17645 PF03799 Cell division protein FtsQ FFE93_RS17650 PF07478 D-ala D-ala ligase C-terminus FFE93_RS17650 PF01820 D-ala D-ala ligase N-terminus FFE93_RS17655 PF01225 Mur ligase family, catalytic domain FFE93_RS17655 PF02875 Mur ligase family, glutamate ligase domain FFE93_RS17655 PF08245 Mur ligase middle domain FFE93_RS17660 PF03033 Glycosyltransferase family 28 N-terminal domain FFE93_RS17660 PF04101 Glycosyltransferase family 28 C-terminal domain FFE93_RS17665 PF01098 Cell cycle protein FFE93_RS17670 PF08245 Mur ligase middle domain FFE93_RS17670 PF02875 Mur ligase family, glutamate ligase domain FFE93_RS17675 PF00953 Glycosyl transferase family 4 FFE93_RS17675 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 FFE93_RS17680 PF01225 Mur ligase family, catalytic domain FFE93_RS17680 PF08245 Mur ligase middle domain FFE93_RS17680 PF02875 Mur ligase family, glutamate ligase domain FFE93_RS17685 PF01225 Mur ligase family, catalytic domain FFE93_RS17685 PF08245 Mur ligase middle domain FFE93_RS17685 PF02875 Mur ligase family, glutamate ligase domain FFE93_RS17690 PF00905 Penicillin binding protein transpeptidase domain FFE93_RS17690 PF03717 Penicillin-binding Protein dimerisation domain FFE93_RS17695 PF04999 Cell division protein FtsL FFE93_RS17700 PF01795 MraW methylase family FFE93_RS17705 PF02381 MraZ protein, putative antitoxin-like FFE93_RS17710 PF06610 L-alanine exporter FFE93_RS17715 PF00356 Bacterial regulatory proteins, lacI family FFE93_RS17715 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FFE93_RS17720 PF10369 Small subunit of acetolactate synthase FFE93_RS17725 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FFE93_RS17725 PF00205 Thiamine pyrophosphate enzyme, central domain FFE93_RS17725 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FFE93_RS17730 PF00501 AMP-binding enzyme FFE93_RS17735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFE93_RS17735 PF03466 LysR substrate binding domain FFE93_RS17745 PF08502 LeuA allosteric (dimerisation) domain FFE93_RS17745 PF00682 HMGL-like FFE93_RS17750 PF00180 Isocitrate/isopropylmalate dehydrogenase FFE93_RS17755 PF00330 Aconitase family (aconitate hydratase) FFE93_RS17760 PF00694 Aconitase C-terminal domain FFE93_RS17765 PF07690 Major Facilitator Superfamily FFE93_RS17770 PF02901 Pyruvate formate lyase-like FFE93_RS17770 PF01228 Glycine radical FFE93_RS17775 PF04055 Radical SAM superfamily FFE93_RS17780 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FFE93_RS17780 PF12793 Sugar transport-related sRNA regulator N-term FFE93_RS17790 PF00528 Binding-protein-dependent transport system inner membrane component FFE93_RS17795 PF00005 ABC transporter FFE93_RS17800 PF09335 SNARE associated Golgi protein FFE93_RS17805 PF03104 DNA polymerase family B, exonuclease domain FFE93_RS17805 PF00136 DNA polymerase family B FFE93_RS17810 PF00271 Helicase conserved C-terminal domain FFE93_RS17810 PF00176 SNF2 family N-terminal domain FFE93_RS17810 PF12137 RNA polymerase recycling family C-terminal FFE93_RS17810 PF18339 RapA N-terminal Tudor like domain 1 FFE93_RS17810 PF18337 RapA N-terminal Tudor like domain FFE93_RS17815 PF00849 RNA pseudouridylate synthase FFE93_RS17825 PF00226 DnaJ domain FFE93_RS17825 PF05099 Tellurite resistance protein TerB FFE93_RS17830 PF04453 LPS transport system D FFE93_RS17830 PF03968 OstA-like protein FFE93_RS17835 PF00639 PPIC-type PPIASE domain FFE93_RS17835 PF09312 SurA N-terminal domain FFE93_RS17840 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FFE93_RS17845 PF00398 Ribosomal RNA adenine dimethylase FFE93_RS17850 PF04379 ApaG domain FFE93_RS17855 PF00149 Calcineurin-like phosphoesterase FFE93_RS17860 PF00186 Dihydrofolate reductase FFE93_RS17865 PF12821 Threonine/Serine exporter, ThrE FFE93_RS17870 PF06738 Putative threonine/serine exporter FFE93_RS17875 PF01810 LysE type translocator FFE93_RS17880 PF02142 MGS-like domain FFE93_RS17880 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FFE93_RS17880 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FFE93_RS17885 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain FFE93_RS17885 PF00117 Glutamine amidotransferase class-I FFE93_RS17890 PF05173 Dihydrodipicolinate reductase, C-terminus FFE93_RS17890 PF01113 Dihydrodipicolinate reductase, N-terminus FFE93_RS17895 PF02401 LytB protein FFE93_RS17900 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FFE93_RS17905 PF01252 Signal peptidase (SPase) II FFE93_RS17910 PF06827 Zinc finger found in FPG and IleRS FFE93_RS17910 PF00133 tRNA synthetases class I (I, L, M and V) FFE93_RS17910 PF08264 Anticodon-binding domain of tRNA FFE93_RS17915 PF01687 Riboflavin kinase FFE93_RS17915 PF06574 FAD synthetase FFE93_RS17930 PF01649 Ribosomal protein S20 FFE93_RS17935 PF03466 LysR substrate binding domain FFE93_RS17935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFE93_RS17940 PF06965 Na+/H+ antiporter 1 FFE93_RS17945 PF00684 DnaJ central domain FFE93_RS17945 PF00226 DnaJ domain FFE93_RS17945 PF01556 DnaJ C terminal domain FFE93_RS17950 PF00012 Hsp70 protein FFE93_RS17955 PF01184 GPR1/FUN34/yaaH family FFE93_RS17965 PF07690 Major Facilitator Superfamily FFE93_RS17970 PF00994 Probable molybdopterin binding domain FFE93_RS17975 PF00923 Transaldolase/Fructose-6-phosphate aldolase FFE93_RS17985 PF03883 Peroxide stress protein YaaA FFE93_RS17990 PF00291 Pyridoxal-phosphate dependent enzyme FFE93_RS17990 PF14821 Threonine synthase N terminus FFE93_RS17995 PF08544 GHMP kinases C terminal FFE93_RS17995 PF00288 GHMP kinases N terminal domain FFE93_RS18000 PF01842 ACT domain FFE93_RS18000 PF03447 Homoserine dehydrogenase, NAD binding domain FFE93_RS18000 PF00742 Homoserine dehydrogenase FFE93_RS18000 PF00696 Amino acid kinase family FFE93_RS18000 PF13840 ACT domain FFE93_RS18005 PF08254 Threonine leader peptide FFE93_RS18010 PF00486 Transcriptional regulatory protein, C terminal FFE93_RS18010 PF00072 Response regulator receiver domain FFE93_RS18015 PF05981 CreA protein FFE93_RS18020 PF12833 Helix-turn-helix domain FFE93_RS18020 PF06445 GyrI-like small molecule binding domain FFE93_RS18025 PF00300 Histidine phosphatase superfamily (branch 1) FFE93_RS18030 PF01931 Protein of unknown function DUF84 FFE93_RS18035 PF01371 Trp repressor protein FFE93_RS18040 PF14718 Soluble lytic murein transglycosylase L domain FFE93_RS18040 PF01464 Transglycosylase SLT domain FFE93_RS18045 PF00690 Cation transporter/ATPase, N-terminus FFE93_RS18045 PF00689 Cation transporting ATPase, C-terminus FFE93_RS18055 PF17152 Periplasmic sensor domain FFE93_RS18055 PF00990 Diguanylate cyclase, GGDEF domain FFE93_RS18060 PF00691 OmpA family FFE93_RS18065 PF12848 ABC transporter FFE93_RS18065 PF00005 ABC transporter FFE93_RS18070 PF02661 Fic/DOC family FFE93_RS18075 PF03466 LysR substrate binding domain FFE93_RS18075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFE93_RS18080 PF08240 Alcohol dehydrogenase GroES-like domain FFE93_RS18080 PF00107 Zinc-binding dehydrogenase FFE93_RS18085 PF13521 AAA domain FFE93_RS18085 PF01381 Helix-turn-helix FFE93_RS18090 PF18073 Rubredoxin metal binding domain FFE93_RS18095 PF18429 Domain of unknown function (DUF5609) FFE93_RS18100 PF10144 Bacterial virulence factor haemolysin FFE93_RS18105 PF07804 HipA-like C-terminal domain FFE93_RS18110 PF01048 Phosphorylase superfamily FFE93_RS18115 PF01676 Metalloenzyme superfamily FFE93_RS18120 PF02885 Glycosyl transferase family, helical bundle domain FFE93_RS18120 PF00591 Glycosyl transferase family, a/b domain FFE93_RS18120 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain FFE93_RS18125 PF01791 DeoC/LacD family aldolase FFE93_RS18130 PF01773 Na+ dependent nucleoside transporter N-terminus FFE93_RS18130 PF07662 Na+ dependent nucleoside transporter C-terminus FFE93_RS18130 PF07670 Nucleoside recognition FFE93_RS18135 PF01026 TatD related DNase FFE93_RS18140 PF01734 Patatin-like phospholipase FFE93_RS18145 PF07043 Protein of unknown function (DUF1328) FFE93_RS18150 PF04972 BON domain FFE93_RS18155 PF00009 Elongation factor Tu GTP binding domain FFE93_RS18155 PF03144 Elongation factor Tu domain 2 FFE93_RS18155 PF16658 Class II release factor RF3, C-terminal domain FFE93_RS18160 PF00583 Acetyltransferase (GNAT) family FFE93_RS18165 PF03603 DNA polymerase III psi subunit FFE93_RS18180 PF08468 Methyltransferase small domain N-terminal FFE93_RS18180 PF05175 Methyltransferase small domain FFE93_RS18185 PF00248 Aldo/keto reductase family FFE93_RS18190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFE93_RS18190 PF03466 LysR substrate binding domain FFE93_RS18210 PF07256 Protein of unknown function (DUF1435) FFE93_RS18215 PF00990 Diguanylate cyclase, GGDEF domain FFE93_RS18225 PF00294 pfkB family carbohydrate kinase FFE93_RS18230 PF11471 Maltoporin periplasmic N-terminal extension FFE93_RS18230 PF02264 LamB porin FFE93_RS18235 PF00367 phosphotransferase system, EIIB FFE93_RS18235 PF02378 Phosphotransferase system, EIIC FFE93_RS18240 PF00251 Glycosyl hydrolases family 32 N-terminal domain FFE93_RS18240 PF08244 Glycosyl hydrolases family 32 C terminal FFE93_RS18245 PF13407 Periplasmic binding protein domain FFE93_RS18245 PF00356 Bacterial regulatory proteins, lacI family FFE93_RS18250 PF00158 Sigma-54 interaction domain FFE93_RS18250 PF02954 Bacterial regulatory protein, Fis family FFE93_RS18250 PF00989 PAS fold FFE93_RS18275 PF02543 Carbamoyltransferase N-terminus FFE93_RS18275 PF16861 Carbamoyltransferase C-terminus FFE93_RS18285 PF03610 PTS system fructose IIA component FFE93_RS18285 PF05524 PEP-utilising enzyme, N-terminal FFE93_RS18285 PF00391 PEP-utilising enzyme, mobile domain FFE93_RS18285 PF00381 PTS HPr component phosphorylation site FFE93_RS18290 PF02734 DAK2 domain FFE93_RS18295 PF02733 Dak1 domain FFE93_RS18300 PF00465 Iron-containing alcohol dehydrogenase FFE93_RS18305 PF00873 AcrB/AcrD/AcrF family FFE93_RS18310 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FFE93_RS18325 PF13520 Amino acid permease FFE93_RS18335 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FFE93_RS18340 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FFE93_RS18340 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FFE93_RS18345 PF00325 Bacterial regulatory proteins, crp family FFE93_RS18345 PF04198 Putative sugar-binding domain FFE93_RS18355 PF00005 ABC transporter FFE93_RS18360 PF02653 Branched-chain amino acid transport system / permease component FFE93_RS18365 PF02653 Branched-chain amino acid transport system / permease component FFE93_RS18370 PF13407 Periplasmic binding protein domain FFE93_RS18375 PF01791 DeoC/LacD family aldolase FFE93_RS18380 PF03992 Antibiotic biosynthesis monooxygenase FFE93_RS18385 PF10696 Protein of unknown function (DUF2501) FFE93_RS18410 PF12102 Domain of unknown function (DUF3578) FFE93_RS18410 PF07728 AAA domain (dynein-related subfamily) FFE93_RS18415 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A FFE93_RS18420 PF06755 CbtA_toxin of type IV toxin-antitoxin system FFE93_RS18425 PF03230 Antirestriction protein FFE93_RS18430 PF06067 Domain of unknown function (DUF932) FFE93_RS18520 PF00005 ABC transporter FFE93_RS18540 PF13356 Arm DNA-binding domain FFE93_RS18540 PF00589 Phage integrase family FFE93_RS18550 PF03739 Lipopolysaccharide export system permease LptF/LptG FFE93_RS18555 PF03739 Lipopolysaccharide export system permease LptF/LptG FFE93_RS18560 PF02789 Cytosol aminopeptidase family, N-terminal domain FFE93_RS18560 PF00883 Cytosol aminopeptidase family, catalytic domain FFE93_RS18565 PF04364 DNA polymerase III chi subunit, HolC FFE93_RS18570 PF08264 Anticodon-binding domain of tRNA FFE93_RS18570 PF00133 tRNA synthetases class I (I, L, M and V) FFE93_RS18570 PF10458 Valyl tRNA synthetase tRNA binding arm FFE93_RS18575 PF00583 Acetyltransferase (GNAT) family FFE93_RS18580 PF06877 Regulator of ribonuclease activity B FFE93_RS18585 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FFE93_RS18585 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FFE93_RS18590 PF04074 YhcH/YjgK/YiaL FFE93_RS18600 PF00528 Binding-protein-dependent transport system inner membrane component FFE93_RS18605 PF12911 N-terminal TM domain of oligopeptide transport permease C FFE93_RS18605 PF00528 Binding-protein-dependent transport system inner membrane component FFE93_RS18610 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FFE93_RS18610 PF00005 ABC transporter FFE93_RS18615 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FFE93_RS18615 PF00005 ABC transporter FFE93_RS18620 PF03477 ATP cone domain FFE93_RS18620 PF13597 Anaerobic ribonucleoside-triphosphate reductase FFE93_RS18640 PF00392 Bacterial regulatory proteins, gntR family FFE93_RS18640 PF07702 UTRA domain FFE93_RS18645 PF06754 Phosphonate metabolism protein PhnG FFE93_RS18650 PF05845 Bacterial phosphonate metabolism protein (PhnH) FFE93_RS18655 PF05861 Bacterial phosphonate metabolism protein (PhnI) FFE93_RS18660 PF06007 Phosphonate metabolism protein PhnJ FFE93_RS18665 PF00005 ABC transporter FFE93_RS18670 PF00005 ABC transporter FFE93_RS18675 PF07969 Amidohydrolase family FFE93_RS18685 PF12706 Beta-lactamase superfamily domain FFE93_RS18690 PF13460 NAD(P)H-binding FFE93_RS18705 PF03459 TOBE domain FFE93_RS18705 PF17912 MalK OB fold domain FFE93_RS18705 PF00005 ABC transporter FFE93_RS18710 PF00528 Binding-protein-dependent transport system inner membrane component FFE93_RS18715 PF00528 Binding-protein-dependent transport system inner membrane component FFE93_RS18720 PF13416 Bacterial extracellular solute-binding protein FFE93_RS18735 PF10940 Protein of unknown function (DUF2618) FFE93_RS18740 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain FFE93_RS18740 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain FFE93_RS18740 PF01276 Orn/Lys/Arg decarboxylase, major domain FFE93_RS18745 PF13520 Amino acid permease FFE93_RS18750 PF01541 GIY-YIG catalytic domain FFE93_RS18755 PF13508 Acetyltransferase (GNAT) domain FFE93_RS18760 PF02036 SCP-2 sterol transfer family FFE93_RS18765 PF01136 Peptidase family U32 FFE93_RS18770 PF01136 Peptidase family U32 FFE93_RS18775 PF00296 Luciferase-like monooxygenase FFE93_RS18780 PF00270 DEAD/DEAH box helicase FFE93_RS18780 PF00271 Helicase conserved C-terminal domain FFE93_RS18780 PF12343 Cold shock protein DEAD box A FFE93_RS18780 PF03880 DbpA RNA binding domain FFE93_RS18790 PF07719 Tetratricopeptide repeat FFE93_RS18790 PF13181 Tetratricopeptide repeat FFE93_RS18795 PF03725 3' exoribonuclease family, domain 2 FFE93_RS18795 PF01138 3' exoribonuclease family, domain 1 FFE93_RS18795 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain FFE93_RS18795 PF00013 KH domain FFE93_RS18795 PF00575 S1 RNA binding domain FFE93_RS18800 PF00312 Ribosomal protein S15 FFE93_RS18805 PF16198 tRNA pseudouridylate synthase B C-terminal domain FFE93_RS18805 PF01509 TruB family pseudouridylate synthase (N terminal domain) FFE93_RS18805 PF09157 Pseudouridine synthase II TruB, C-terminal FFE93_RS18810 PF02033 Ribosome-binding factor A FFE93_RS18815 PF08364 Bacterial translation initiation factor IF-2 associated region FFE93_RS18815 PF11987 Translation-initiation factor 2 FFE93_RS18815 PF03144 Elongation factor Tu domain 2 FFE93_RS18815 PF00009 Elongation factor Tu GTP binding domain FFE93_RS18815 PF04760 Translation initiation factor IF-2, N-terminal region FFE93_RS18820 PF08529 NusA N-terminal domain FFE93_RS18820 PF13184 NusA-like KH domain FFE93_RS18820 PF00575 S1 RNA binding domain FFE93_RS18825 PF02576 RimP N-terminal domain FFE93_RS18825 PF17384 RimP C-terminal SH3 domain FFE93_RS18840 PF03840 Preprotein translocase SecG subunit FFE93_RS18845 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FFE93_RS18845 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FFE93_RS18845 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FFE93_RS18845 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FFE93_RS18850 PF00809 Pterin binding enzyme FFE93_RS18855 PF17862 AAA+ lid domain FFE93_RS18855 PF06480 FtsH Extracellular FFE93_RS18855 PF00004 ATPase family associated with various cellular activities (AAA) FFE93_RS18855 PF01434 Peptidase family M41 FFE93_RS18860 PF01728 FtsJ-like methyltransferase FFE93_RS18865 PF01985 CRS1 / YhbY (CRM) domain FFE93_RS18870 PF03449 Transcription elongation factor, N-terminal FFE93_RS18870 PF01272 Transcription elongation factor, GreA/GreB, C-term FFE93_RS18875 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family FFE93_RS18880 PF00072 Response regulator receiver domain FFE93_RS18880 PF00486 Transcriptional regulatory protein, C terminal FFE93_RS18885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFE93_RS18885 PF00512 His Kinase A (phospho-acceptor) domain FFE93_RS18885 PF00672 HAMP domain FFE93_RS18890 PF01018 GTP1/OBG FFE93_RS18890 PF01926 50S ribosome-binding GTPase FFE93_RS18895 PF00892 EamA-like transporter family FFE93_RS18900 PF01016 Ribosomal L27 protein FFE93_RS18905 PF00829 Ribosomal prokaryotic L21 protein FFE93_RS18910 PF00348 Polyprenyl synthetase FFE93_RS18920 PF13693 Winged helix-turn-helix DNA-binding FFE93_RS18925 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FFE93_RS18925 PF00056 lactate/malate dehydrogenase, NAD binding domain FFE93_RS18930 PF01316 Arginine repressor, DNA binding domain FFE93_RS18930 PF02863 Arginine repressor, C-terminal domain FFE93_RS18940 PF01225 Mur ligase family, catalytic domain FFE93_RS18940 PF02875 Mur ligase family, glutamate ligase domain FFE93_RS18940 PF08245 Mur ligase middle domain FFE93_RS18945 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain FFE93_RS18950 PF02203 Tar ligand binding domain homologue FFE93_RS18950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FFE93_RS18950 PF00672 HAMP domain FFE93_RS18955 PF00719 Inorganic pyrophosphatase FFE93_RS18960 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like FFE93_RS18965 PF04357 TamB, inner membrane protein subunit of TAM complex FFE93_RS18970 PF01103 Surface antigen FFE93_RS18970 PF17243 POTRA domain TamA domain 1 FFE93_RS18970 PF07244 Surface antigen variable number repeat FFE93_RS18975 PF01625 Peptide methionine sulfoxide reductase FFE93_RS18980 PF01595 Cyclin M transmembrane N-terminal domain FFE93_RS18980 PF00571 CBS domain FFE93_RS18980 PF03471 Transporter associated domain FFE93_RS18985 PF06526 Protein of unknown function (DUF1107) FFE93_RS18990 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) FFE93_RS18995 PF00459 Inositol monophosphatase family FFE93_RS19000 PF00149 Calcineurin-like phosphoesterase FFE93_RS19000 PF02872 5'-nucleotidase, C-terminal domain FFE93_RS19005 PF04405 Domain of Unknown function (DUF542) FFE93_RS19005 PF01814 Hemerythrin HHE cation binding domain FFE93_RS19010 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FFE93_RS19010 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FFE93_RS19015 PF08525 Opacity-associated protein A N-terminal motif FFE93_RS19015 PF04225 Opacity-associated protein A LysM-like domain FFE93_RS19025 PF01281 Ribosomal protein L9, N-terminal domain FFE93_RS19025 PF03948 Ribosomal protein L9, C-terminal domain FFE93_RS19030 PF01084 Ribosomal protein S18 FFE93_RS19035 PF00436 Single-strand binding protein family FFE93_RS19040 PF01250 Ribosomal protein S6 FFE93_RS19050 PF07338 Protein of unknown function (DUF1471) FFE93_RS19055 PF00326 Prolyl oligopeptidase family FFE93_RS19060 PF07338 Protein of unknown function (DUF1471) FFE93_RS19065 PF18158 Adaptive response protein AidB N-terminal domain FFE93_RS19065 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FFE93_RS19065 PF02770 Acyl-CoA dehydrogenase, middle domain FFE93_RS19070 PF08032 RNA 2'-O ribose methyltransferase substrate binding FFE93_RS19070 PF00588 SpoU rRNA Methylase family FFE93_RS19075 PF00773 RNB domain FFE93_RS19075 PF00575 S1 RNA binding domain FFE93_RS19075 PF08206 Ribonuclease B OB domain FFE93_RS19075 PF08461 Ribonuclease R winged-helix domain FFE93_RS19075 PF17876 Cold shock domain FFE93_RS19080 PF02082 Transcriptional regulator FFE93_RS19085 PF00709 Adenylosuccinate synthetase FFE93_RS19090 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) FFE93_RS19095 PF01145 SPFH domain / Band 7 family FFE93_RS19100 PF12221 Bacterial membrane protein N terminal FFE93_RS19100 PF01145 SPFH domain / Band 7 family FFE93_RS19105 PF16360 GTP-binding GTPase Middle Region FFE93_RS19105 PF13167 GTP-binding GTPase N-terminal FFE93_RS19105 PF01926 50S ribosome-binding GTPase FFE93_RS19110 PF17209 Hfq protein FFE93_RS19120 PF01119 DNA mismatch repair protein, C-terminal domain FFE93_RS19120 PF08676 MutL C terminal dimerisation domain FFE93_RS19125 PF01520 N-acetylmuramoyl-L-alanine amidase FFE93_RS19130 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE FFE93_RS19135 PF01256 Carbohydrate kinase FFE93_RS19135 PF03853 YjeF-related protein N-terminus FFE93_RS19140 PF08331 Domain of unknown function (DUF1730) FFE93_RS19165 PF00929 Exonuclease FFE93_RS19170 PF03193 RsgA GTPase FFE93_RS19175 PF02666 Phosphatidylserine decarboxylase FFE93_RS19180 PF12794 Mechanosensitive ion channel inner membrane domain 1 FFE93_RS19180 PF12795 Mechanosensitive ion channel porin domain FFE93_RS19180 PF00924 Mechanosensitive ion channel FFE93_RS19185 PF00152 tRNA synthetases class II (D, K and N) FFE93_RS19190 PF02910 Fumarate reductase flavoprotein C-term FFE93_RS19190 PF00890 FAD binding domain FFE93_RS19195 PF13085 2Fe-2S iron-sulfur cluster binding domain FFE93_RS19195 PF13183 4Fe-4S dicluster domain FFE93_RS19200 PF02300 Fumarate reductase subunit C FFE93_RS19205 PF02313 Fumarate reductase subunit D FFE93_RS19210 PF08212 Lipocalin-like domain FFE93_RS19215 PF00893 Small Multidrug Resistance protein FFE93_RS19220 PF08085 Entericidin EcnA/B family FFE93_RS19225 PF01132 Elongation factor P (EF-P) OB domain FFE93_RS19225 PF09285 Elongation factor P, C-terminal FFE93_RS19225 PF08207 Elongation factor P (EF-P) KOW-like domain FFE93_RS19230 PF04055 Radical SAM superfamily FFE93_RS19235 PF13698 Domain of unknown function (DUF4156) FFE93_RS19240 PF00118 TCP-1/cpn60 chaperonin family FFE93_RS19245 PF00166 Chaperonin 10 Kd subunit FFE93_RS19250 PF04186 FxsA cytoplasmic membrane protein FFE93_RS19255 PF10415 Fumarase C C-terminus FFE93_RS19255 PF00206 Lyase FFE93_RS19260 PF03605 Anaerobic c4-dicarboxylate membrane transporter FFE93_RS19265 PF03091 CutA1 divalent ion tolerance protein FFE93_RS19270 PF02683 Cytochrome C biogenesis protein transmembrane region FFE93_RS19270 PF11412 Disulphide bond corrector protein DsbC FFE93_RS19275 PF07992 Pyridine nucleotide-disulphide oxidoreductase FFE93_RS19275 PF13247 4Fe-4S dicluster domain FFE93_RS19275 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FFE93_RS19280 PF07690 Major Facilitator Superfamily FFE93_RS19285 PF08666 SAF domain FFE93_RS19285 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus FFE93_RS19290 PF13556 PucR C-terminal helix-turn-helix domain FFE93_RS19290 PF17853 GGDEF-like domain FFE93_RS19290 PF05651 Putative sugar diacid recognition FFE93_RS19295 PF02595 Glycerate kinase family FFE93_RS19300 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FFE93_RS19300 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FFE93_RS19305 PF03328 HpcH/HpaI aldolase/citrate lyase family FFE93_RS19325 PF10609 NUBPL iron-transfer P-loop NTPase FFE93_RS19330 PF03552 Cellulose synthase FFE93_RS19330 PF00535 Glycosyl transferase family 2 FFE93_RS19330 PF07238 PilZ domain FFE93_RS19335 PF03170 Bacterial cellulose synthase subunit FFE93_RS19340 PF13181 Tetratricopeptide repeat FFE93_RS19340 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) FFE93_RS19350 PF01270 Glycosyl hydrolases family 8 FFE93_RS19355 PF04055 Radical SAM superfamily FFE93_RS19360 PF10636 Hemin uptake protein hemP FFE93_RS19365 PF07715 TonB-dependent Receptor Plug Domain FFE93_RS19365 PF00593 TonB dependent receptor FFE93_RS19370 PF05171 Haemin-degrading HemS.ChuX domain FFE93_RS19375 PF01497 Periplasmic binding protein FFE93_RS19380 PF01032 FecCD transport family FFE93_RS19385 PF00005 ABC transporter FFE93_RS19390 PF00392 Bacterial regulatory proteins, gntR family FFE93_RS19390 PF00155 Aminotransferase class I and II FFE93_RS19400 PF00593 TonB dependent receptor FFE93_RS19400 PF07715 TonB-dependent Receptor Plug Domain FFE93_RS19405 PF12795 Mechanosensitive ion channel porin domain FFE93_RS19405 PF00924 Mechanosensitive ion channel FFE93_RS19405 PF12794 Mechanosensitive ion channel inner membrane domain 1 FFE93_RS19415 PF05193 Peptidase M16 inactive domain FFE93_RS19415 PF00675 Insulinase (Peptidase family M16) FFE93_RS19420 PF00005 ABC transporter FFE93_RS19420 PF06472 ABC transporter transmembrane region 2 FFE93_RS19425 PF07715 TonB-dependent Receptor Plug Domain FFE93_RS19430 PF04773 FecR protein FFE93_RS19430 PF16220 Domain of unknown function (DUF4880) FFE93_RS19435 PF04539 Sigma-70 region 3 FFE93_RS19435 PF04542 Sigma-70 region 2 FFE93_RS19435 PF04545 Sigma-70, region 4 FFE93_RS19445 PF01206 Sulfurtransferase TusA FFE93_RS19450 PF04143 Sulphur transport FFE93_RS19455 PF01312 FlhB HrpN YscU SpaS Family FFE93_RS19460 PF01311 Bacterial export proteins, family 1 FFE93_RS19465 PF01313 Bacterial export proteins, family 3 FFE93_RS19470 PF00813 FliP family FFE93_RS19490 PF18269 T3SS EscN ATPase C-terminal domain FFE93_RS19490 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FFE93_RS19495 PF00771 FHIPEP family FFE93_RS19505 PF07201 HrpJ-like domain FFE93_RS19520 PF01514 Secretory protein of YscJ/FliF family FFE93_RS19540 PF14525 AraC-binding-like domain FFE93_RS19540 PF12833 Helix-turn-helix domain FFE93_RS19565 PF04888 Secretion system effector C (SseC) like family FFE93_RS19575 PF03433 EspA-like secreted protein FFE93_RS19595 PF00263 Bacterial type II and III secretion system protein FFE93_RS19595 PF03958 Bacterial type II/III secretion system short domain FFE93_RS19605 PF01627 Hpt domain FFE93_RS19605 PF00512 His Kinase A (phospho-acceptor) domain FFE93_RS19605 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FFE93_RS19605 PF00072 Response regulator receiver domain FFE93_RS19605 PF00672 HAMP domain FFE93_RS19605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFE93_RS19610 PF00196 Bacterial regulatory proteins, luxR family FFE93_RS19610 PF00072 Response regulator receiver domain FFE93_RS19615 PF00375 Sodium:dicarboxylate symporter family FFE93_RS19620 PF16177 Acetyl-coenzyme A synthetase N-terminus FFE93_RS19620 PF00501 AMP-binding enzyme FFE93_RS19620 PF13193 AMP-binding enzyme C-terminal domain FFE93_RS19625 PF04341 Protein of unknown function, DUF485 FFE93_RS19630 PF00474 Sodium:solute symporter family FFE93_RS19670 PF12724 Flavodoxin domain FFE93_RS19675 PF02386 Cation transport protein FFE93_RS19685 PF00557 Metallopeptidase family M24 FFE93_RS19690 PF00378 Enoyl-CoA hydratase/isomerase FFE93_RS19690 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FFE93_RS19690 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FFE93_RS19695 PF00108 Thiolase, N-terminal domain FFE93_RS19695 PF02803 Thiolase, C-terminal domain FFE93_RS19700 PF00970 Oxidoreductase FAD-binding domain FFE93_RS19700 PF00175 Oxidoreductase NAD-binding domain FFE93_RS19705 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase FFE93_RS19710 PF02357 Transcription termination factor nusG FFE93_RS19715 PF00490 Delta-aminolevulinic acid dehydratase FFE93_RS19720 PF01026 TatD related DNase FFE93_RS19725 PF00902 Sec-independent protein translocase protein (TatC) FFE93_RS19735 PF02416 mttA/Hcf106 family FFE93_RS19740 PF03109 ABC1 family FFE93_RS19745 PF02036 SCP-2 sterol transfer family FFE93_RS19750 PF01209 ubiE/COQ5 methyltransferase family FFE93_RS19755 PF02646 RmuC family FFE93_RS19760 PF09335 SNARE associated Golgi protein FFE93_RS19765 PF13722 5TM C-terminal transporter carbon starvation CstA FFE93_RS19765 PF02554 Carbon starvation protein CstA FFE93_RS19775 PF01048 Phosphorylase superfamily FFE93_RS19780 PF01738 Dienelactone hydrolase family FFE93_RS19790 PF01717 Cobalamin-independent synthase, Catalytic domain FFE93_RS19790 PF08267 Cobalamin-independent synthase, N-terminal domain FFE93_RS19795 PF03466 LysR substrate binding domain FFE93_RS19795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFE93_RS19800 PF00892 EamA-like transporter family FFE93_RS19805 PF03547 Membrane transport protein FFE93_RS19810 PF03009 Glycerophosphoryl diester phosphodiesterase family FFE93_RS19815 PF17912 MalK OB fold domain FFE93_RS19815 PF00005 ABC transporter FFE93_RS19820 PF00528 Binding-protein-dependent transport system inner membrane component FFE93_RS19825 PF00528 Binding-protein-dependent transport system inner membrane component FFE93_RS19830 PF13416 Bacterial extracellular solute-binding protein FFE93_RS19870 PF00005 ABC transporter FFE93_RS19875 PF12399 Branched-chain amino acid ATP-binding cassette transporter FFE93_RS19875 PF00005 ABC transporter FFE93_RS19880 PF11862 Domain of unknown function (DUF3382) FFE93_RS19880 PF02653 Branched-chain amino acid transport system / permease component FFE93_RS19885 PF02653 Branched-chain amino acid transport system / permease component FFE93_RS19890 PF13458 Periplasmic binding protein FFE93_RS19895 PF12568 Acetyltransferase (GNAT) domain, PanZ FFE93_RS19900 PF00140 Sigma-70 factor, region 1.2 FFE93_RS19900 PF04542 Sigma-70 region 2 FFE93_RS19900 PF04545 Sigma-70, region 4 FFE93_RS19905 PF18075 FtsX extracellular domain FFE93_RS19905 PF02687 FtsX-like permease family FFE93_RS19910 PF00005 ABC transporter FFE93_RS19915 PF00448 SRP54-type protein, GTPase domain FFE93_RS19915 PF02881 SRP54-type protein, helical bundle domain FFE93_RS19925 PF06611 Protein of unknown function (DUF1145) FFE93_RS19940 PF07947 YhhN family FFE93_RS19945 PF00403 Heavy-metal-associated domain FFE93_RS19950 PF01206 Sulfurtransferase TusA FFE93_RS19955 PF02592 Putative vitamin uptake transporter FFE93_RS19960 PF08786 DcrB FFE93_RS19965 PF13183 4Fe-4S dicluster domain FFE93_RS19965 PF02754 Cysteine-rich domain FFE93_RS19970 PF00890 FAD binding domain FFE93_RS19975 PF04324 BFD-like [2Fe-2S] binding domain FFE93_RS19975 PF01266 FAD dependent oxidoreductase FFE93_RS19980 PF07690 Major Facilitator Superfamily FFE93_RS19985 PF03009 Glycerophosphoryl diester phosphodiesterase family FFE93_RS19995 PF12146 Serine aminopeptidase, S33 FFE93_RS20000 PF01810 LysE type translocator FFE93_RS20005 PF01810 LysE type translocator FFE93_RS20010 PF16124 RecQ zinc-binding FFE93_RS20010 PF00570 HRDC domain FFE93_RS20010 PF09382 RQC domain FFE93_RS20010 PF00270 DEAD/DEAH box helicase FFE93_RS20010 PF00271 Helicase conserved C-terminal domain FFE93_RS20015 PF02253 Phospholipase A1 FFE93_RS20020 PF03061 Thioesterase superfamily FFE93_RS20025 PF00892 EamA-like transporter family FFE93_RS20030 PF01544 CorA-like Mg2+ transporter protein FFE93_RS20040 PF09370 Phosphoenolpyruvate hydrolase-like FFE93_RS20055 PF13361 UvrD-like helicase C-terminal domain FFE93_RS20055 PF00580 UvrD/REP helicase N-terminal domain FFE93_RS20060 PF13419 Haloacid dehalogenase-like hydrolase FFE93_RS20065 PF02899 Phage integrase, N-terminal SAM-like domain FFE93_RS20065 PF00589 Phage integrase family FFE93_RS20070 PF04340 Protein of unknown function, DUF484 FFE93_RS20075 PF01678 Diaminopimelate epimerase FFE93_RS20080 PF13627 Prokaryotic lipoprotein-attachment site FFE93_RS20085 PF01491 Frataxin-like domain FFE93_RS20090 PF01295 Adenylate cyclase, class-I FFE93_RS20090 PF12633 Adenylate cyclase NT domain FFE93_RS20095 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain FFE93_RS20095 PF03900 Porphobilinogen deaminase, C-terminal domain FFE93_RS20100 PF02602 Uroporphyrinogen-III synthase HemD FFE93_RS20105 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase FFE93_RS20110 PF07219 HemY protein N-terminus FFE93_RS20110 PF07719 Tetratricopeptide repeat FFE93_RS20135 PF00324 Amino acid permease FFE93_RS20140 PF03808 Glycosyl transferase WecB/TagA/CpsF family FFE93_RS20145 PF06899 WzyE protein, O-antigen assembly polymerase FFE93_RS20150 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 FFE93_RS20155 PF01943 Polysaccharide biosynthesis protein FFE93_RS20160 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FFE93_RS20170 PF00483 Nucleotidyl transferase FFE93_RS20175 PF16363 GDP-mannose 4,6 dehydratase FFE93_RS20180 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FFE93_RS20180 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FFE93_RS20180 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FFE93_RS20185 PF02350 UDP-N-acetylglucosamine 2-epimerase FFE93_RS20190 PF02706 Chain length determinant protein FFE93_RS20195 PF00953 Glycosyl transferase family 4 FFE93_RS20200 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FFE93_RS20200 PF07497 Rho termination factor, RNA-binding domain FFE93_RS20200 PF07498 Rho termination factor, N-terminal domain FFE93_RS20205 PF00085 Thioredoxin FFE93_RS20210 PF00270 DEAD/DEAH box helicase FFE93_RS20210 PF00271 Helicase conserved C-terminal domain FFE93_RS20215 PF02541 Ppx/GppA phosphatase family FFE93_RS20220 PF00295 Glycosyl hydrolases family 28 FFE93_RS20225 PF00580 UvrD/REP helicase N-terminal domain FFE93_RS20225 PF13361 UvrD-like helicase C-terminal domain FFE93_RS20240 PF02753 Pili assembly chaperone PapD, C-terminal domain FFE93_RS20240 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FFE93_RS20245 PF13953 PapC C-terminal domain FFE93_RS20245 PF13954 PapC N-terminal domain FFE93_RS20245 PF00577 Outer membrane usher protein FFE93_RS20255 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FFE93_RS20255 PF02753 Pili assembly chaperone PapD, C-terminal domain FFE93_RS20275 PF01320 Colicin immunity protein / pyocin immunity protein FFE93_RS20285 PF01320 Colicin immunity protein / pyocin immunity protein FFE93_RS20295 PF01320 Colicin immunity protein / pyocin immunity protein FFE93_RS20305 PF01320 Colicin immunity protein / pyocin immunity protein FFE93_RS20310 PF06958 S-type Pyocin FFE93_RS20315 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain FFE93_RS20315 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain FFE93_RS20320 PF03466 LysR substrate binding domain FFE93_RS20320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFE93_RS20335 PF00585 C-terminal regulatory domain of Threonine dehydratase FFE93_RS20335 PF00291 Pyridoxal-phosphate dependent enzyme FFE93_RS20340 PF00920 Dehydratase family FFE93_RS20345 PF01063 Amino-transferase class IV FFE93_RS20355 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FFE93_RS20355 PF00205 Thiamine pyrophosphate enzyme, central domain FFE93_RS20355 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FFE93_RS20360 PF08046 IlvGEDA operon leader peptide FFE93_RS20370 PF01078 Magnesium chelatase, subunit ChlI FFE93_RS20370 PF13335 Magnesium chelatase, subunit ChlI C-terminal FFE93_RS20375 PF04219 Protein of unknown function, DUF FFE93_RS20380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFE93_RS20380 PF03466 LysR substrate binding domain FFE93_RS20385 PF02653 Branched-chain amino acid transport system / permease component FFE93_RS20390 PF02653 Branched-chain amino acid transport system / permease component FFE93_RS20395 PF00005 ABC transporter FFE93_RS20400 PF13407 Periplasmic binding protein domain FFE93_RS20440 PF01177 Asp/Glu/Hydantoin racemase FFE93_RS20445 PF00593 TonB dependent receptor FFE93_RS20445 PF07715 TonB-dependent Receptor Plug Domain FFE93_RS20450 PF05958 tRNA (Uracil-5-)-methyltransferase FFE93_RS20455 PF07226 Protein of unknown function (DUF1422) FFE93_RS20460 PF00440 Bacterial regulatory proteins, tetR family FFE93_RS20465 PF07992 Pyridine nucleotide-disulphide oxidoreductase FFE93_RS20465 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FFE93_RS20470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFE93_RS20470 PF03466 LysR substrate binding domain FFE93_RS20475 PF00462 Glutaredoxin FFE93_RS20475 PF08534 Redoxin FFE93_RS20480 PF07992 Pyridine nucleotide-disulphide oxidoreductase FFE93_RS20480 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FFE93_RS20490 PF00529 HlyD membrane-fusion protein of T1SS FFE93_RS20495 PF00005 ABC transporter FFE93_RS20495 PF00664 ABC transporter transmembrane region FFE93_RS20510 PF00593 TonB dependent receptor FFE93_RS20510 PF07715 TonB-dependent Receptor Plug Domain FFE93_RS20515 PF14698 Argininosuccinate lyase C-terminal FFE93_RS20515 PF00206 Lyase FFE93_RS20520 PF00696 Amino acid kinase family FFE93_RS20525 PF02774 Semialdehyde dehydrogenase, dimerisation domain FFE93_RS20525 PF01118 Semialdehyde dehydrogenase, NAD binding domain FFE93_RS20530 PF07687 Peptidase dimerisation domain FFE93_RS20530 PF01546 Peptidase family M20/M25/M40 FFE93_RS20535 PF00311 Phosphoenolpyruvate carboxylase FFE93_RS20540 PF00970 Oxidoreductase FAD-binding domain FFE93_RS20540 PF00175 Oxidoreductase NAD-binding domain FFE93_RS20545 PF07690 Major Facilitator Superfamily FFE93_RS20550 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded FFE93_RS20555 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FFE93_RS20555 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FFE93_RS20560 PF00230 Major intrinsic protein FFE93_RS20570 PF06005 Cell division protein ZapB FFE93_RS20575 PF03737 Aldolase/RraA FFE93_RS20580 PF01040 UbiA prenyltransferase family FFE93_RS20585 PF10431 C-terminal, D2-small domain, of ClpB protein FFE93_RS20585 PF07724 AAA domain (Cdc48 subfamily) FFE93_RS20585 PF00004 ATPase family associated with various cellular activities (AAA) FFE93_RS20590 PF00227 Proteasome subunit FFE93_RS20595 PF05036 Sporulation related domain FFE93_RS20600 PF00356 Bacterial regulatory proteins, lacI family FFE93_RS20605 PF00270 DEAD/DEAH box helicase FFE93_RS20605 PF17764 3′ DNA-binding domain (3′BD) FFE93_RS20605 PF00271 Helicase conserved C-terminal domain FFE93_RS20605 PF18074 Primosomal protein N C-terminal domain FFE93_RS20605 PF18319 PriA DNA helicase Cys-rich region (CRR) domain FFE93_RS20615 PF01197 Ribosomal protein L31 FFE93_RS20620 PF01340 Met Apo-repressor, MetJ FFE93_RS20625 PF01053 Cys/Met metabolism PLP-dependent enzyme FFE93_RS20630 PF00742 Homoserine dehydrogenase FFE93_RS20630 PF03447 Homoserine dehydrogenase, NAD binding domain FFE93_RS20630 PF00696 Amino acid kinase family FFE93_RS20635 PF02219 Methylenetetrahydrofolate reductase FFE93_RS20640 PF05656 Protein of unknown function (DUF805) FFE93_RS20645 PF07305 Protein of unknown function (DUF1454) FFE93_RS20650 PF00121 Triosephosphate isomerase FFE93_RS20665 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) FFE93_RS20670 PF00365 Phosphofructokinase FFE93_RS20675 PF16916 Dimerisation domain of Zinc Transporter FFE93_RS20675 PF01545 Cation efflux family FFE93_RS20680 PF07813 LTXXQ motif family protein FFE93_RS20685 PF00486 Transcriptional regulatory protein, C terminal FFE93_RS20685 PF00072 Response regulator receiver domain FFE93_RS20690 PF00512 His Kinase A (phospho-acceptor) domain FFE93_RS20690 PF16527 Two-component sensor protein CpxA, periplasmic domain FFE93_RS20690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFE93_RS20690 PF00672 HAMP domain FFE93_RS20695 PF02805 Metal binding domain of Ada FFE93_RS20695 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FFE93_RS20695 PF12833 Helix-turn-helix domain FFE93_RS20695 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FFE93_RS20700 PF00588 SpoU rRNA Methylase family FFE93_RS20705 PF00132 Bacterial transferase hexapeptide (six repeats) FFE93_RS20705 PF06426 Serine acetyltransferase, N-terminal FFE93_RS20710 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus FFE93_RS20710 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FFE93_RS20715 PF02556 Preprotein translocase subunit SecB FFE93_RS20720 PF00462 Glutaredoxin FFE93_RS20725 PF00581 Rhodanese-like domain FFE93_RS20730 PF01676 Metalloenzyme superfamily FFE93_RS20730 PF06415 BPG-independent PGAM N-terminus (iPGM_N) FFE93_RS20735 PF01551 Peptidase family M23 FFE93_RS20740 PF04748 Divergent polysaccharide deacetylase FFE93_RS20745 PF08240 Alcohol dehydrogenase GroES-like domain FFE93_RS20745 PF00107 Zinc-binding dehydrogenase FFE93_RS20750 PF00155 Aminotransferase class I and II FFE93_RS20755 PF01370 NAD dependent epimerase/dehydratase family FFE93_RS20760 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FFE93_RS20765 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FFE93_RS20770 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) FFE93_RS20775 PF00535 Glycosyl transferase family 2 FFE93_RS20780 PF01467 Cytidylyltransferase-like FFE93_RS20785 PF06827 Zinc finger found in FPG and IleRS FFE93_RS20785 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain FFE93_RS20785 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain FFE93_RS20790 PF00471 Ribosomal protein L33 FFE93_RS20795 PF00830 Ribosomal L28 family FFE93_RS20805 PF04002 RadC-like JAB domain FFE93_RS20810 PF04127 DNA / pantothenate metabolism flavoprotein FFE93_RS20810 PF02441 Flavoprotein FFE93_RS20815 PF00692 dUTPase FFE93_RS20820 PF00440 Bacterial regulatory proteins, tetR family FFE93_RS20825 PF06917 Periplasmic pectate lyase FFE93_RS20830 PF06178 Oligogalacturonate-specific porin protein (KdgM) FFE93_RS20835 PF00563 EAL domain FFE93_RS20835 PF00672 HAMP domain FFE93_RS20835 PF00990 Diguanylate cyclase, GGDEF domain FFE93_RS20835 PF17154 Gammaproteobacterial periplasmic sensor domain FFE93_RS20840 PF00005 ABC transporter FFE93_RS20840 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FFE93_RS20845 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FFE93_RS20845 PF00005 ABC transporter FFE93_RS20850 PF00528 Binding-protein-dependent transport system inner membrane component FFE93_RS20850 PF12911 N-terminal TM domain of oligopeptide transport permease C FFE93_RS20855 PF00528 Binding-protein-dependent transport system inner membrane component FFE93_RS20860 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FFE93_RS20865 PF04829 Pre-toxin domain with VENN motif FFE93_RS20865 PF13332 Hemagglutinin repeat FFE93_RS20865 PF05860 haemagglutination activity domain FFE93_RS20865 PF13018 Extended Signal Peptide of Type V secretion system FFE93_RS20870 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB FFE93_RS20870 PF08479 POTRA domain, ShlB-type FFE93_RS20870 PF17287 POTRA domain FFE93_RS20880 PF07690 Major Facilitator Superfamily FFE93_RS20885 PF05231 MASE1 FFE93_RS20885 PF07730 Histidine kinase FFE93_RS20885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFE93_RS20890 PF00072 Response regulator receiver domain FFE93_RS20890 PF00196 Bacterial regulatory proteins, luxR family FFE93_RS20895 PF00884 Sulfatase FFE93_RS20895 PF08019 Phosphoethanolamine transferase EptA/EptB FFE93_RS20900 PF02566 OsmC-like protein FFE93_RS20905 PF12146 Serine aminopeptidase, S33 FFE93_RS20910 PF00324 Amino acid permease FFE93_RS20915 PF00221 Aromatic amino acid lyase FFE93_RS20920 PF17392 Urocanase C-terminal domain FFE93_RS20920 PF01175 Urocanase Rossmann-like domain FFE93_RS20920 PF17391 Urocanase N-terminal domain FFE93_RS20925 PF13426 PAS domain FFE93_RS20925 PF00563 EAL domain FFE93_RS20925 PF00990 Diguanylate cyclase, GGDEF domain FFE93_RS20930 PF00378 Enoyl-CoA hydratase/isomerase FFE93_RS20935 PF07670 Nucleoside recognition FFE93_RS20935 PF07662 Na+ dependent nucleoside transporter C-terminus FFE93_RS20935 PF01773 Na+ dependent nucleoside transporter N-terminus FFE93_RS20945 PF03458 UPF0126 domain FFE93_RS20950 PF01653 NAD-dependent DNA ligase adenylation domain FFE93_RS20950 PF03120 NAD-dependent DNA ligase OB-fold domain FFE93_RS20960 PF00625 Guanylate kinase FFE93_RS20965 PF01192 RNA polymerase Rpb6 FFE93_RS20970 PF13291 ACT domain FFE93_RS20970 PF02824 TGS domain FFE93_RS20970 PF04607 Region found in RelA / SpoT proteins FFE93_RS20975 PF00588 SpoU rRNA Methylase family FFE93_RS20975 PF12105 SpoU, rRNA methylase, C-terminal FFE93_RS20980 PF00270 DEAD/DEAH box helicase FFE93_RS20980 PF00271 Helicase conserved C-terminal domain FFE93_RS20980 PF17191 RecG wedge domain FFE93_RS20985 PF03616 Sodium/glutamate symporter FFE93_RS20990 PF00860 Permease family FFE93_RS20995 PF05170 AsmA family FFE93_RS21010 PF00196 Bacterial regulatory proteins, luxR family FFE93_RS21020 PF00196 Bacterial regulatory proteins, luxR family FFE93_RS21030 PF13693 Winged helix-turn-helix DNA-binding FFE93_RS21045 PF00158 Sigma-54 interaction domain FFE93_RS21045 PF02954 Bacterial regulatory protein, Fis family FFE93_RS21045 PF00072 Response regulator receiver domain FFE93_RS21050 PF09500 Putative thioesterase (yiiD_Cterm) FFE93_RS21050 PF00583 Acetyltransferase (GNAT) family FFE93_RS21055 PF02580 D-Tyr-tRNA(Tyr) deacylase FFE93_RS21060 PF03631 Virulence factor BrkB FFE93_RS21065 PF13419 Haloacid dehalogenase-like hydrolase FFE93_RS21070 PF00009 Elongation factor Tu GTP binding domain FFE93_RS21070 PF00679 Elongation factor G C-terminus FFE93_RS21070 PF03144 Elongation factor Tu domain 2 FFE93_RS21075 PF00120 Glutamine synthetase, catalytic domain FFE93_RS21075 PF03951 Glutamine synthetase, beta-Grasp domain FFE93_RS21080 PF00512 His Kinase A (phospho-acceptor) domain FFE93_RS21080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFE93_RS21080 PF00989 PAS fold FFE93_RS21085 PF00072 Response regulator receiver domain FFE93_RS21085 PF02954 Bacterial regulatory protein, Fis family FFE93_RS21085 PF00158 Sigma-54 interaction domain FFE93_RS21090 PF06969 HemN C-terminal domain FFE93_RS21090 PF04055 Radical SAM superfamily FFE93_RS21100 PF04220 Der GTPase activator (YihI) FFE93_RS21110 PF01926 50S ribosome-binding GTPase FFE93_RS21115 PF00476 DNA polymerase family A FFE93_RS21115 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FFE93_RS21115 PF01367 5'-3' exonuclease, C-terminal SAM fold FFE93_RS21115 PF01612 3'-5' exonuclease FFE93_RS21120 PF01323 DSBA-like thioredoxin domain FFE93_RS21125 PF01636 Phosphotransferase enzyme family FFE93_RS21130 PF06288 Protein of unknown function (DUF1040) FFE93_RS21135 PF12804 MobA-like NTP transferase domain FFE93_RS21140 PF03205 Molybdopterin guanine dinucleotide synthesis protein B FFE93_RS21170 PF07729 FCD domain FFE93_RS21170 PF00392 Bacterial regulatory proteins, gntR family FFE93_RS21175 PF07690 Major Facilitator Superfamily FFE93_RS21180 PF00356 Bacterial regulatory proteins, lacI family FFE93_RS21185 PF00294 pfkB family carbohydrate kinase FFE93_RS21190 PF13407 Periplasmic binding protein domain FFE93_RS21195 PF02653 Branched-chain amino acid transport system / permease component FFE93_RS21200 PF00005 ABC transporter FFE93_RS21205 PF05025 RbsD / FucU transport protein family FFE93_RS21210 PF02705 K+ potassium transporter FFE93_RS21215 PF17868 AAA lid domain FFE93_RS21215 PF12592 Protein of unknown function (DUF3763) FFE93_RS21215 PF07728 AAA domain (dynein-related subfamily) FFE93_RS21220 PF05762 VWA domain containing CoxE-like protein FFE93_RS21230 PF03590 Aspartate-ammonia ligase FFE93_RS21235 PF01037 Lrp/AsnC ligand binding domain FFE93_RS21240 PF00258 Flavodoxin FFE93_RS21245 PF01134 Glucose inhibited division protein A FFE93_RS21245 PF13932 GidA associated domain FFE93_RS21250 PF02527 rRNA small subunit methyltransferase G FFE93_RS21255 PF03899 ATP synthase I chain FFE93_RS21260 PF00119 ATP synthase A chain FFE93_RS21265 PF00137 ATP synthase subunit C FFE93_RS21270 PF00430 ATP synthase B/B' CF(0) FFE93_RS21275 PF00213 ATP synthase delta (OSCP) subunit FFE93_RS21280 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FFE93_RS21280 PF00306 ATP synthase alpha/beta chain, C terminal domain FFE93_RS21280 PF02874 ATP synthase alpha/beta family, beta-barrel domain FFE93_RS21285 PF00231 ATP synthase FFE93_RS21290 PF02874 ATP synthase alpha/beta family, beta-barrel domain FFE93_RS21290 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FFE93_RS21295 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain FFE93_RS21295 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain FFE93_RS21300 PF00132 Bacterial transferase hexapeptide (six repeats) FFE93_RS21300 PF12804 MobA-like NTP transferase domain FFE93_RS21305 PF01380 SIS domain FFE93_RS21310 PF01740 STAS domain FFE93_RS21310 PF00916 Sulfate permease family FFE93_RS21315 PF12849 PBP superfamily domain FFE93_RS21320 PF00528 Binding-protein-dependent transport system inner membrane component FFE93_RS21325 PF00528 Binding-protein-dependent transport system inner membrane component FFE93_RS21330 PF00005 ABC transporter FFE93_RS21335 PF01895 PhoU domain FFE93_RS21345 PF00497 Bacterial extracellular solute-binding proteins, family 3 FFE93_RS21350 PF00528 Binding-protein-dependent transport system inner membrane component FFE93_RS21355 PF00528 Binding-protein-dependent transport system inner membrane component FFE93_RS21360 PF13419 Haloacid dehalogenase-like hydrolase FFE93_RS21365 PF00860 Permease family FFE93_RS21375 PF00072 Response regulator receiver domain FFE93_RS21375 PF00196 Bacterial regulatory proteins, luxR family FFE93_RS21380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFE93_RS21380 PF00512 His Kinase A (phospho-acceptor) domain FFE93_RS21380 PF00989 PAS fold FFE93_RS21385 PF03358 NADPH-dependent FMN reductase FFE93_RS21390 PF00672 HAMP domain FFE93_RS21390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FFE93_RS21390 PF02203 Tar ligand binding domain homologue FFE93_RS21395 PF00528 Binding-protein-dependent transport system inner membrane component FFE93_RS21400 PF09383 NIL domain FFE93_RS21400 PF00005 ABC transporter FFE93_RS21410 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase FFE93_RS21410 PF12241 Trans-2-enoyl-CoA reductase catalytic region FFE93_RS21410 PF07055 Enoyl reductase FAD binding domain FFE93_RS21415 PF12631 MnmE helical domain FFE93_RS21415 PF10396 GTP-binding protein TrmE N-terminus FFE93_RS21415 PF01926 50S ribosome-binding GTPase FFE93_RS21420 PF02096 60Kd inner membrane protein FFE93_RS21420 PF14849 YidC periplasmic domain FFE93_RS21425 PF01809 Putative membrane protein insertion efficiency factor FFE93_RS21430 PF00825 Ribonuclease P FFE93_RS21435 PF00468 Ribosomal protein L34