locus-tag class description ZYMOP_RS00005 PF01649 Ribosomal protein S20 ZYMOP_RS00010 PF00308 Bacterial dnaA protein ZYMOP_RS00010 PF08299 Bacterial dnaA protein helix-turn-helix ZYMOP_RS00010 PF11638 DnaA N-terminal domain ZYMOP_RS00015 PF00005 ABC transporter ZYMOP_RS00015 PF12848 ABC transporter ZYMOP_RS00020 PF00691 OmpA family ZYMOP_RS00025 PF03928 Haem-degrading ZYMOP_RS00030 PF01027 Inhibitor of apoptosis-promoting Bax1 ZYMOP_RS00035 PF01738 Dienelactone hydrolase family ZYMOP_RS00040 PF02464 Competence-damaged protein ZYMOP_RS00040 PF00994 Probable molybdopterin binding domain ZYMOP_RS00040 PF18146 Damage-inducible protein CinA KH domain ZYMOP_RS00045 PF00557 Metallopeptidase family M24 ZYMOP_RS00050 PF01212 Beta-eliminating lyase ZYMOP_RS00060 PF01433 Peptidase family M1 domain ZYMOP_RS00060 PF17432 Domain of unknown function (DUF3458_C) ARM repeats ZYMOP_RS00060 PF11940 Domain of unknown function (DUF3458) Ig-like fold ZYMOP_RS00070 PF04228 Putative neutral zinc metallopeptidase ZYMOP_RS00075 PF00924 Mechanosensitive ion channel ZYMOP_RS00080 PF01513 ATP-NAD kinase ZYMOP_RS00085 PF08032 RNA 2'-O ribose methyltransferase substrate binding ZYMOP_RS00085 PF00588 SpoU rRNA Methylase family ZYMOP_RS00090 PF00381 PTS HPr component phosphorylation site ZYMOP_RS00095 PF03830 PTS system sorbose subfamily IIB component ZYMOP_RS00095 PF03610 PTS system fructose IIA component ZYMOP_RS00100 PF03668 P-loop ATPase protein family ZYMOP_RS00105 PF07475 HPr Serine kinase C-terminal domain ZYMOP_RS00105 PF02603 HPr Serine kinase N terminus ZYMOP_RS00110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ZYMOP_RS00110 PF13755 Sensor N-terminal transmembrane domain ZYMOP_RS00110 PF13756 Stimulus-sensing domain ZYMOP_RS00110 PF00512 His Kinase A (phospho-acceptor) domain ZYMOP_RS00110 PF00672 HAMP domain ZYMOP_RS00115 PF00072 Response regulator receiver domain ZYMOP_RS00115 PF00486 Transcriptional regulatory protein, C terminal ZYMOP_RS00120 PF00478 IMP dehydrogenase / GMP reductase domain ZYMOP_RS00120 PF00571 CBS domain ZYMOP_RS00125 PF01189 16S rRNA methyltransferase RsmB/F ZYMOP_RS00125 PF01029 NusB family ZYMOP_RS00135 PF00398 Ribosomal RNA adenine dimethylase ZYMOP_RS00140 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ZYMOP_RS00150 PF04453 LPS transport system D ZYMOP_RS00155 PF02789 Cytosol aminopeptidase family, N-terminal domain ZYMOP_RS00155 PF00883 Cytosol aminopeptidase family, catalytic domain ZYMOP_RS00165 PF05683 Fumarase C-terminus ZYMOP_RS00165 PF05681 Fumarate hydratase (Fumerase) ZYMOP_RS00170 PF01728 FtsJ-like methyltransferase ZYMOP_RS00170 PF01479 S4 domain ZYMOP_RS00185 PF03807 NADP oxidoreductase coenzyme F420-dependent ZYMOP_RS00185 PF14748 Pyrroline-5-carboxylate reductase dimerisation ZYMOP_RS00190 PF03099 Biotin/lipoate A/B protein ligase family ZYMOP_RS00205 PF13580 SIS domain ZYMOP_RS00215 PF04226 Transglycosylase associated protein ZYMOP_RS00225 PF05199 GMC oxidoreductase ZYMOP_RS00225 PF00732 GMC oxidoreductase ZYMOP_RS00230 PF00034 Cytochrome c ZYMOP_RS00230 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ZYMOP_RS00235 PF00356 Bacterial regulatory proteins, lacI family ZYMOP_RS00240 PF00550 Phosphopantetheine attachment site ZYMOP_RS00245 PF02801 Beta-ketoacyl synthase, C-terminal domain ZYMOP_RS00245 PF00109 Beta-ketoacyl synthase, N-terminal domain ZYMOP_RS00250 PF02618 YceG-like family ZYMOP_RS00260 PF00291 Pyridoxal-phosphate dependent enzyme ZYMOP_RS00260 PF13291 ACT domain ZYMOP_RS00270 PF00171 Aldehyde dehydrogenase family ZYMOP_RS00275 PF14824 Sirohaem biosynthesis protein central ZYMOP_RS00275 PF10414 Sirohaem synthase dimerisation region ZYMOP_RS00275 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ZYMOP_RS00280 PF00155 Aminotransferase class I and II ZYMOP_RS00295 PF00117 Glutamine amidotransferase class-I ZYMOP_RS00295 PF00958 GMP synthase C terminal domain ZYMOP_RS00295 PF02540 NAD synthase ZYMOP_RS00300 PF01578 Cytochrome C assembly protein ZYMOP_RS00305 PF03100 CcmE ZYMOP_RS00310 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal ZYMOP_RS00310 PF01578 Cytochrome C assembly protein ZYMOP_RS00315 PF08534 Redoxin ZYMOP_RS00320 PF03918 Cytochrome C biogenesis protein ZYMOP_RS00340 PF00444 Ribosomal protein L36 ZYMOP_RS00345 PF13590 Domain of unknown function (DUF4136) ZYMOP_RS00350 PF00246 Zinc carboxypeptidase ZYMOP_RS00350 PF18027 Cytosolic carboxypeptidase N-terminal domain ZYMOP_RS00355 PF00300 Histidine phosphatase superfamily (branch 1) ZYMOP_RS00360 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ZYMOP_RS00360 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ZYMOP_RS00370 PF02780 Transketolase, C-terminal domain ZYMOP_RS00370 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ZYMOP_RS00370 PF02779 Transketolase, pyrimidine binding domain ZYMOP_RS00375 PF01050 Mannose-6-phosphate isomerase ZYMOP_RS00375 PF00483 Nucleotidyl transferase ZYMOP_RS00385 PF01061 ABC-2 type transporter ZYMOP_RS00395 PF17768 RecJ OB domain ZYMOP_RS00395 PF02272 DHHA1 domain ZYMOP_RS00395 PF01368 DHH family ZYMOP_RS00400 PF01227 GTP cyclohydrolase I ZYMOP_RS00405 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ZYMOP_RS00405 PF13378 Enolase C-terminal domain-like ZYMOP_RS00410 PF01281 Ribosomal protein L9, N-terminal domain ZYMOP_RS00410 PF03948 Ribosomal protein L9, C-terminal domain ZYMOP_RS00415 PF01084 Ribosomal protein S18 ZYMOP_RS00420 PF01250 Ribosomal protein S6 ZYMOP_RS00425 PF00698 Acyl transferase domain ZYMOP_RS00440 PF02416 mttA/Hcf106 family ZYMOP_RS00445 PF02416 mttA/Hcf106 family ZYMOP_RS00450 PF00902 Sec-independent protein translocase protein (TatC) ZYMOP_RS00460 PF12282 Signal transduction histidine kinase ZYMOP_RS00460 PF07568 Histidine kinase ZYMOP_RS00460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ZYMOP_RS00470 PF00271 Helicase conserved C-terminal domain ZYMOP_RS00470 PF00270 DEAD/DEAH box helicase ZYMOP_RS00480 PF00342 Phosphoglucose isomerase ZYMOP_RS00485 PF07992 Pyridine nucleotide-disulphide oxidoreductase ZYMOP_RS00485 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ZYMOP_RS00495 PF02705 K+ potassium transporter ZYMOP_RS00520 PF00588 SpoU rRNA Methylase family ZYMOP_RS00525 PF03477 ATP cone domain ZYMOP_RS00530 PF00464 Serine hydroxymethyltransferase ZYMOP_RS00535 PF02502 Ribose/Galactose Isomerase ZYMOP_RS00540 PF00155 Aminotransferase class I and II ZYMOP_RS00545 PF01177 Asp/Glu/Hydantoin racemase ZYMOP_RS00550 PF02660 Glycerol-3-phosphate acyltransferase ZYMOP_RS00555 PF02481 DNA recombination-mediator protein A ZYMOP_RS00555 PF17782 DprA winged helix domain ZYMOP_RS00560 PF01396 Topoisomerase DNA binding C4 zinc finger ZYMOP_RS00560 PF01131 DNA topoisomerase ZYMOP_RS00560 PF01751 Toprim domain ZYMOP_RS00560 PF13368 Topoisomerase C-terminal repeat ZYMOP_RS00565 PF00899 ThiF family ZYMOP_RS00570 PF00692 dUTPase ZYMOP_RS00575 PF02441 Flavoprotein ZYMOP_RS00575 PF04127 DNA / pantothenate metabolism flavoprotein ZYMOP_RS00580 PF03109 ABC1 family ZYMOP_RS00585 PF01209 ubiE/COQ5 methyltransferase family ZYMOP_RS00595 PF06827 Zinc finger found in FPG and IleRS ZYMOP_RS00595 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ZYMOP_RS00595 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ZYMOP_RS00620 PF00288 GHMP kinases N terminal domain ZYMOP_RS00620 PF08544 GHMP kinases C terminal ZYMOP_RS00630 PF03853 YjeF-related protein N-terminus ZYMOP_RS00630 PF01256 Carbohydrate kinase ZYMOP_RS00635 PF05958 tRNA (Uracil-5-)-methyltransferase ZYMOP_RS00640 PF01502 Phosphoribosyl-AMP cyclohydrolase ZYMOP_RS00645 PF00072 Response regulator receiver domain ZYMOP_RS00645 PF00486 Transcriptional regulatory protein, C terminal ZYMOP_RS00650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ZYMOP_RS00650 PF00512 His Kinase A (phospho-acceptor) domain ZYMOP_RS00650 PF16527 Two-component sensor protein CpxA, periplasmic domain ZYMOP_RS00650 PF00672 HAMP domain ZYMOP_RS00665 PF04996 Succinylarginine dihydrolase ZYMOP_RS00670 PF00933 Glycosyl hydrolase family 3 N terminal domain ZYMOP_RS00680 PF01869 BadF/BadG/BcrA/BcrD ATPase family ZYMOP_RS00685 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain ZYMOP_RS00685 PF02129 X-Pro dipeptidyl-peptidase (S15 family) ZYMOP_RS00690 PF00154 recA bacterial DNA recombination protein ZYMOP_RS00700 PF00072 Response regulator receiver domain ZYMOP_RS00700 PF00486 Transcriptional regulatory protein, C terminal ZYMOP_RS00705 PF01895 PhoU domain ZYMOP_RS00710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ZYMOP_RS00710 PF00512 His Kinase A (phospho-acceptor) domain ZYMOP_RS00710 PF11808 Phosphate regulon sensor protein PhoR ZYMOP_RS00710 PF00989 PAS fold ZYMOP_RS00715 PF02666 Phosphatidylserine decarboxylase ZYMOP_RS00720 PF01066 CDP-alcohol phosphatidyltransferase ZYMOP_RS00725 PF00318 Ribosomal protein S2 ZYMOP_RS00730 PF00889 Elongation factor TS ZYMOP_RS00735 PF00696 Amino acid kinase family ZYMOP_RS00740 PF01765 Ribosome recycling factor ZYMOP_RS00745 PF01255 Putative undecaprenyl diphosphate synthase ZYMOP_RS00755 PF13288 DXP reductoisomerase C-terminal domain ZYMOP_RS00755 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ZYMOP_RS00755 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ZYMOP_RS00760 PF02163 Peptidase family M50 ZYMOP_RS00760 PF17820 PDZ domain ZYMOP_RS00765 PF01103 Surface antigen ZYMOP_RS00765 PF07244 Surface antigen variable number repeat ZYMOP_RS00775 PF07977 FabA-like domain ZYMOP_RS00780 PF01197 Ribosomal protein L31 ZYMOP_RS00790 PF07992 Pyridine nucleotide-disulphide oxidoreductase ZYMOP_RS00795 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ZYMOP_RS00795 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ZYMOP_RS00800 PF10369 Small subunit of acetolactate synthase ZYMOP_RS00805 PF00205 Thiamine pyrophosphate enzyme, central domain ZYMOP_RS00805 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ZYMOP_RS00805 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ZYMOP_RS00820 PF14376 Haem-binding domain ZYMOP_RS00820 PF00034 Cytochrome c ZYMOP_RS00820 PF03150 Di-haem cytochrome c peroxidase ZYMOP_RS00825 PF01523 Putative modulator of DNA gyrase ZYMOP_RS00835 PF00484 Carbonic anhydrase ZYMOP_RS00840 PF04055 Radical SAM superfamily ZYMOP_RS00840 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family ZYMOP_RS00845 PF03364 Polyketide cyclase / dehydrase and lipid transport ZYMOP_RS00850 PF02464 Competence-damaged protein ZYMOP_RS00860 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ZYMOP_RS00860 PF02542 YgbB family ZYMOP_RS00865 PF01207 Dihydrouridine synthase (Dus) ZYMOP_RS00870 PF02954 Bacterial regulatory protein, Fis family ZYMOP_RS00870 PF00072 Response regulator receiver domain ZYMOP_RS00870 PF00158 Sigma-54 interaction domain ZYMOP_RS00875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ZYMOP_RS00875 PF00989 PAS fold ZYMOP_RS00875 PF00512 His Kinase A (phospho-acceptor) domain ZYMOP_RS00875 PF00672 HAMP domain ZYMOP_RS00880 PF02954 Bacterial regulatory protein, Fis family ZYMOP_RS00880 PF00072 Response regulator receiver domain ZYMOP_RS00880 PF00158 Sigma-54 interaction domain ZYMOP_RS00890 PF00216 Bacterial DNA-binding protein ZYMOP_RS00895 PF13411 MerR HTH family regulatory protein ZYMOP_RS00900 PF00043 Glutathione S-transferase, C-terminal domain ZYMOP_RS00900 PF13417 Glutathione S-transferase, N-terminal domain ZYMOP_RS00905 PF00310 Glutamine amidotransferases class-II ZYMOP_RS00905 PF04898 Glutamate synthase central domain ZYMOP_RS00905 PF01645 Conserved region in glutamate synthase ZYMOP_RS00905 PF01493 GXGXG motif ZYMOP_RS00910 PF07992 Pyridine nucleotide-disulphide oxidoreductase ZYMOP_RS00910 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ZYMOP_RS00915 PF02673 Bacitracin resistance protein BacA ZYMOP_RS00925 PF03167 Uracil DNA glycosylase superfamily ZYMOP_RS00930 PF07992 Pyridine nucleotide-disulphide oxidoreductase ZYMOP_RS00935 PF04279 Intracellular septation protein A ZYMOP_RS00940 PF07690 Major Facilitator Superfamily ZYMOP_RS00950 PF01037 Lrp/AsnC ligand binding domain ZYMOP_RS00955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ZYMOP_RS00955 PF00512 His Kinase A (phospho-acceptor) domain ZYMOP_RS00955 PF00989 PAS fold ZYMOP_RS00955 PF13188 PAS domain ZYMOP_RS00965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ZYMOP_RS00965 PF00512 His Kinase A (phospho-acceptor) domain ZYMOP_RS00970 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ZYMOP_RS00975 PF12804 MobA-like NTP transferase domain ZYMOP_RS00980 PF12705 PD-(D/E)XK nuclease superfamily ZYMOP_RS00985 PF00580 UvrD/REP helicase N-terminal domain ZYMOP_RS00985 PF13361 UvrD-like helicase C-terminal domain ZYMOP_RS00985 PF12705 PD-(D/E)XK nuclease superfamily ZYMOP_RS00990 PF00085 Thioredoxin ZYMOP_RS00995 PF08461 Ribonuclease R winged-helix domain ZYMOP_RS00995 PF17876 Cold shock domain ZYMOP_RS00995 PF00773 RNB domain ZYMOP_RS00995 PF00575 S1 RNA binding domain ZYMOP_RS00995 PF08206 Ribonuclease B OB domain ZYMOP_RS01000 PF03819 MazG nucleotide pyrophosphohydrolase domain ZYMOP_RS01005 PF03099 Biotin/lipoate A/B protein ligase family ZYMOP_RS01005 PF12706 Beta-lactamase superfamily domain ZYMOP_RS01010 PF01026 TatD related DNase ZYMOP_RS01015 PF08264 Anticodon-binding domain of tRNA ZYMOP_RS01015 PF09334 tRNA synthetases class I (M) ZYMOP_RS01020 PF12169 DNA polymerase III subunits gamma and tau domain III ZYMOP_RS01025 PF02223 Thymidylate kinase ZYMOP_RS01030 PF00768 D-alanyl-D-alanine carboxypeptidase ZYMOP_RS01030 PF07943 Penicillin-binding protein 5, C-terminal domain ZYMOP_RS01035 PF05036 Sporulation related domain ZYMOP_RS01035 PF03330 Lytic transglycolase ZYMOP_RS01040 PF13406 Transglycosylase SLT domain ZYMOP_RS01045 PF01270 Glycosyl hydrolases family 8 ZYMOP_RS01055 PF03170 Bacterial cellulose synthase subunit ZYMOP_RS01070 PF01245 Ribosomal protein L19 ZYMOP_RS01075 PF01746 tRNA (Guanine-1)-methyltransferase ZYMOP_RS01080 PF05239 PRC-barrel domain ZYMOP_RS01080 PF01782 RimM N-terminal domain ZYMOP_RS01085 PF00886 Ribosomal protein S16 ZYMOP_RS01090 PF02881 SRP54-type protein, helical bundle domain ZYMOP_RS01090 PF02978 Signal peptide binding domain ZYMOP_RS01090 PF00448 SRP54-type protein, GTPase domain ZYMOP_RS01095 PF01678 Diaminopimelate epimerase ZYMOP_RS01100 PF00919 Uncharacterized protein family UPF0004 ZYMOP_RS01100 PF04055 Radical SAM superfamily ZYMOP_RS01105 PF00448 SRP54-type protein, GTPase domain ZYMOP_RS01105 PF02881 SRP54-type protein, helical bundle domain ZYMOP_RS01110 PF00226 DnaJ domain ZYMOP_RS01120 PF02657 Fe-S metabolism associated domain ZYMOP_RS01125 PF07690 Major Facilitator Superfamily ZYMOP_RS01145 PF04012 PspA/IM30 family ZYMOP_RS01155 PF02954 Bacterial regulatory protein, Fis family ZYMOP_RS01155 PF00158 Sigma-54 interaction domain ZYMOP_RS01160 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ZYMOP_RS01160 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ZYMOP_RS01175 PF12626 Polymerase A arginine-rich C-terminus ZYMOP_RS01175 PF01743 Poly A polymerase head domain ZYMOP_RS01175 PF12627 Probable RNA and SrmB- binding site of polymerase A ZYMOP_RS01180 PF00990 Diguanylate cyclase, GGDEF domain ZYMOP_RS01180 PF08447 PAS fold ZYMOP_RS01180 PF00563 EAL domain ZYMOP_RS01180 PF08448 PAS fold ZYMOP_RS01185 PF00521 DNA gyrase/topoisomerase IV, subunit A ZYMOP_RS01185 PF03989 DNA gyrase C-terminal domain, beta-propeller ZYMOP_RS01190 PF01259 SAICAR synthetase ZYMOP_RS01195 PF00005 ABC transporter ZYMOP_RS01200 PF00528 Binding-protein-dependent transport system inner membrane component ZYMOP_RS01205 PF00528 Binding-protein-dependent transport system inner membrane component ZYMOP_RS01210 PF12849 PBP superfamily domain ZYMOP_RS01220 PF01741 Large-conductance mechanosensitive channel, MscL ZYMOP_RS01230 PF04536 TPM domain ZYMOP_RS01235 PF00293 NUDIX domain ZYMOP_RS01245 PF02867 Ribonucleotide reductase, barrel domain ZYMOP_RS01245 PF00317 Ribonucleotide reductase, all-alpha domain ZYMOP_RS01245 PF03477 ATP cone domain ZYMOP_RS01260 PF00764 Arginosuccinate synthase ZYMOP_RS01275 PF04055 Radical SAM superfamily ZYMOP_RS01285 PF00005 ABC transporter ZYMOP_RS01305 PF06508 Queuosine biosynthesis protein QueC ZYMOP_RS01310 PF00266 Aminotransferase class-V ZYMOP_RS01315 PF02129 X-Pro dipeptidyl-peptidase (S15 family) ZYMOP_RS01320 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ZYMOP_RS01320 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ZYMOP_RS01325 PF01916 Deoxyhypusine synthase ZYMOP_RS01330 PF02405 Permease MlaE ZYMOP_RS01335 PF00005 ABC transporter ZYMOP_RS01350 PF01176 Translation initiation factor 1A / IF-1 ZYMOP_RS01355 PF02545 Maf-like protein ZYMOP_RS01365 PF03884 DNA gyrase inhibitor YacG ZYMOP_RS01375 PF13811 Domain of unknown function (DUF4186) ZYMOP_RS01385 PF02913 FAD linked oxidases, C-terminal domain ZYMOP_RS01385 PF01565 FAD binding domain ZYMOP_RS01390 PF01062 Bestrophin, RFP-TM, chloride channel ZYMOP_RS01395 PF00809 Pterin binding enzyme ZYMOP_RS01400 PF18755 Restriction Enzyme Adenine Methylase Associated ZYMOP_RS01400 PF01555 DNA methylase ZYMOP_RS01405 PF01351 Ribonuclease HII ZYMOP_RS01410 PF08543 Phosphomethylpyrimidine kinase ZYMOP_RS01410 PF03070 TENA/THI-4/PQQC family ZYMOP_RS01410 PF02581 Thiamine monophosphate synthase ZYMOP_RS01415 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ZYMOP_RS01415 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ZYMOP_RS01415 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ZYMOP_RS01415 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ZYMOP_RS01420 PF00854 POT family ZYMOP_RS01430 PF08267 Cobalamin-independent synthase, N-terminal domain ZYMOP_RS01430 PF01717 Cobalamin-independent synthase, Catalytic domain ZYMOP_RS01435 PF03481 Putative GTP-binding controlling metal-binding ZYMOP_RS01435 PF01300 Telomere recombination ZYMOP_RS01440 PF01625 Peptide methionine sulfoxide reductase ZYMOP_RS01445 PF01081 KDPG and KHG aldolase ZYMOP_RS01450 PF00924 Mechanosensitive ion channel ZYMOP_RS01455 PF01609 Transposase DDE domain ZYMOP_RS01475 PF00011 Hsp20/alpha crystallin family ZYMOP_RS01485 PF01258 Prokaryotic dksA/traR C4-type zinc finger ZYMOP_RS01490 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ZYMOP_RS01490 PF02403 Seryl-tRNA synthetase N-terminal domain ZYMOP_RS01495 PF01975 Survival protein SurE ZYMOP_RS01500 PF01551 Peptidase family M23 ZYMOP_RS01500 PF01476 LysM domain ZYMOP_RS01505 PF00528 Binding-protein-dependent transport system inner membrane component ZYMOP_RS01510 PF00528 Binding-protein-dependent transport system inner membrane component ZYMOP_RS01510 PF12911 N-terminal TM domain of oligopeptide transport permease C ZYMOP_RS01515 PF00005 ABC transporter ZYMOP_RS01515 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ZYMOP_RS01520 PF02767 DNA polymerase III beta subunit, central domain ZYMOP_RS01520 PF00712 DNA polymerase III beta subunit, N-terminal domain ZYMOP_RS01520 PF02768 DNA polymerase III beta subunit, C-terminal domain ZYMOP_RS01525 PF00593 TonB dependent receptor ZYMOP_RS01525 PF07715 TonB-dependent Receptor Plug Domain ZYMOP_RS01535 PF00248 Aldo/keto reductase family ZYMOP_RS01550 PF04794 YdjC-like protein ZYMOP_RS01565 PF00962 Adenosine/AMP deaminase ZYMOP_RS01575 PF00860 Permease family ZYMOP_RS01585 PF07690 Major Facilitator Superfamily ZYMOP_RS01590 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ZYMOP_RS01590 PF00529 HlyD membrane-fusion protein of T1SS ZYMOP_RS01595 PF02321 Outer membrane efflux protein ZYMOP_RS01600 PF00440 Bacterial regulatory proteins, tetR family ZYMOP_RS01600 PF08362 YcdC-like protein, C-terminal region ZYMOP_RS01605 PF01979 Amidohydrolase family ZYMOP_RS01615 PF00912 Transglycosylase ZYMOP_RS01620 PF02167 Cytochrome C1 family ZYMOP_RS01625 PF00032 Cytochrome b(C-terminal)/b6/petD ZYMOP_RS01625 PF00033 Cytochrome b/b6/petB ZYMOP_RS01630 PF00355 Rieske [2Fe-2S] domain ZYMOP_RS01630 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal ZYMOP_RS01635 PF00588 SpoU rRNA Methylase family ZYMOP_RS01640 PF01218 Coproporphyrinogen III oxidase ZYMOP_RS01650 PF06689 ClpX C4-type zinc finger ZYMOP_RS01650 PF10431 C-terminal, D2-small domain, of ClpB protein ZYMOP_RS01650 PF07724 AAA domain (Cdc48 subfamily) ZYMOP_RS01655 PF00574 Clp protease ZYMOP_RS01665 PF05697 Bacterial trigger factor protein (TF) ZYMOP_RS01665 PF05698 Bacterial trigger factor protein (TF) C-terminus ZYMOP_RS01665 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ZYMOP_RS01685 PF08244 Glycosyl hydrolases family 32 C terminal ZYMOP_RS01685 PF00251 Glycosyl hydrolases family 32 N-terminal domain ZYMOP_RS01695 PF01370 NAD dependent epimerase/dehydratase family ZYMOP_RS01700 PF12802 MarR family ZYMOP_RS01705 PF01979 Amidohydrolase family ZYMOP_RS01710 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase ZYMOP_RS01715 PF00155 Aminotransferase class I and II ZYMOP_RS01725 PF13417 Glutathione S-transferase, N-terminal domain ZYMOP_RS01750 PF03576 Peptidase family S58 ZYMOP_RS01755 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ZYMOP_RS01770 PF02810 SEC-C motif ZYMOP_RS01770 PF07516 SecA Wing and Scaffold domain ZYMOP_RS01770 PF07517 SecA DEAD-like domain ZYMOP_RS01770 PF01043 SecA preprotein cross-linking domain ZYMOP_RS01775 PF01960 ArgJ family ZYMOP_RS01795 PF06628 Catalase-related immune-responsive ZYMOP_RS01795 PF00199 Catalase ZYMOP_RS01800 PF00990 Diguanylate cyclase, GGDEF domain ZYMOP_RS01810 PF00403 Heavy-metal-associated domain ZYMOP_RS01815 PF00403 Heavy-metal-associated domain ZYMOP_RS01820 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ZYMOP_RS01820 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ZYMOP_RS01825 PF01063 Amino-transferase class IV ZYMOP_RS01835 PF02563 Polysaccharide biosynthesis/export protein ZYMOP_RS01840 PF00005 ABC transporter ZYMOP_RS01860 PF13632 Glycosyl transferase family group 2 ZYMOP_RS01865 PF04349 Periplasmic glucan biosynthesis protein, MdoG ZYMOP_RS01875 PF08502 LeuA allosteric (dimerisation) domain ZYMOP_RS01875 PF00682 HMGL-like ZYMOP_RS01880 PF00593 TonB dependent receptor ZYMOP_RS01890 PF00749 tRNA synthetases class I (E and Q), catalytic domain ZYMOP_RS01895 PF02540 NAD synthase ZYMOP_RS01895 PF00795 Carbon-nitrogen hydrolase ZYMOP_RS01930 PF13307 Helicase C-terminal domain ZYMOP_RS01935 PF01921 tRNA synthetases class I (K) ZYMOP_RS01940 PF01810 LysE type translocator ZYMOP_RS01950 PF01263 Aldose 1-epimerase ZYMOP_RS01955 PF02796 Helix-turn-helix domain of resolvase ZYMOP_RS01955 PF00239 Resolvase, N terminal domain ZYMOP_RS01975 PF00572 Ribosomal protein L13 ZYMOP_RS01980 PF00380 Ribosomal protein S9/S16 ZYMOP_RS01985 PF02203 Tar ligand binding domain homologue ZYMOP_RS01985 PF00672 HAMP domain ZYMOP_RS01985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ZYMOP_RS01990 PF02895 Signal transducing histidine kinase, homodimeric domain ZYMOP_RS01990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ZYMOP_RS01990 PF01627 Hpt domain ZYMOP_RS01990 PF07194 P2 response regulator binding domain ZYMOP_RS01990 PF01584 CheW-like domain ZYMOP_RS01995 PF00072 Response regulator receiver domain ZYMOP_RS01995 PF01339 CheB methylesterase ZYMOP_RS02010 PF02401 LytB protein ZYMOP_RS02015 PF13186 Iron-sulfur cluster-binding domain ZYMOP_RS02015 PF04055 Radical SAM superfamily ZYMOP_RS02025 PF13249 Squalene-hopene cyclase N-terminal domain ZYMOP_RS02025 PF13243 Squalene-hopene cyclase C-terminal domain ZYMOP_RS02030 PF01593 Flavin containing amine oxidoreductase ZYMOP_RS02045 PF00535 Glycosyl transferase family 2 ZYMOP_RS02050 PF01370 NAD dependent epimerase/dehydratase family ZYMOP_RS02055 PF01545 Cation efflux family ZYMOP_RS02060 PF03796 DnaB-like helicase C terminal domain ZYMOP_RS02060 PF00772 DnaB-like helicase N terminal domain ZYMOP_RS02065 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ZYMOP_RS02070 PF00692 dUTPase ZYMOP_RS02075 PF02575 YbaB/EbfC DNA-binding family ZYMOP_RS02080 PF12170 DNA polymerase III tau subunit V interacting with alpha ZYMOP_RS02080 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding ZYMOP_RS02080 PF12169 DNA polymerase III subunits gamma and tau domain III ZYMOP_RS02090 PF00266 Aminotransferase class-V ZYMOP_RS02105 PF02609 Exonuclease VII small subunit ZYMOP_RS02110 PF00348 Polyprenyl synthetase ZYMOP_RS02115 PF01467 Cytidylyltransferase-like ZYMOP_RS02120 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ZYMOP_RS02125 PF02547 Queuosine biosynthesis protein ZYMOP_RS02130 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ZYMOP_RS02130 PF01243 Pyridoxamine 5'-phosphate oxidase ZYMOP_RS02135 PF06490 Flagellar regulatory protein FleQ ZYMOP_RS02135 PF00158 Sigma-54 interaction domain ZYMOP_RS02135 PF02954 Bacterial regulatory protein, Fis family ZYMOP_RS02140 PF03358 NADPH-dependent FMN reductase ZYMOP_RS02150 PF04966 Carbohydrate-selective porin, OprB family ZYMOP_RS02155 PF02254 TrkA-N domain ZYMOP_RS02155 PF00999 Sodium/hydrogen exchanger family ZYMOP_RS02160 PF02272 DHHA1 domain ZYMOP_RS02160 PF01411 tRNA synthetases class II (A) ZYMOP_RS02160 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ZYMOP_RS02170 PF03485 Arginyl tRNA synthetase N terminal domain ZYMOP_RS02170 PF00750 tRNA synthetases class I (R) ZYMOP_RS02170 PF05746 DALR anticodon binding domain ZYMOP_RS02170 PF00133 tRNA synthetases class I (I, L, M and V) ZYMOP_RS02175 PF13286 Phosphohydrolase-associated domain ZYMOP_RS02175 PF01966 HD domain ZYMOP_RS02180 PF00654 Voltage gated chloride channel ZYMOP_RS02190 PF00091 Tubulin/FtsZ family, GTPase domain ZYMOP_RS02190 PF12327 FtsZ family, C-terminal domain ZYMOP_RS02195 PF02491 SHS2 domain inserted in FTSA ZYMOP_RS02200 PF03799 Cell division protein FtsQ ZYMOP_RS02200 PF08478 POTRA domain, FtsQ-type ZYMOP_RS02205 PF07478 D-ala D-ala ligase C-terminus ZYMOP_RS02205 PF01820 D-ala D-ala ligase N-terminus ZYMOP_RS02210 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ZYMOP_RS02210 PF01565 FAD binding domain ZYMOP_RS02215 PF02875 Mur ligase family, glutamate ligase domain ZYMOP_RS02215 PF01225 Mur ligase family, catalytic domain ZYMOP_RS02215 PF08245 Mur ligase middle domain ZYMOP_RS02220 PF04101 Glycosyltransferase family 28 C-terminal domain ZYMOP_RS02220 PF03033 Glycosyltransferase family 28 N-terminal domain ZYMOP_RS02225 PF01098 Cell cycle protein ZYMOP_RS02230 PF08245 Mur ligase middle domain ZYMOP_RS02235 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 ZYMOP_RS02235 PF00953 Glycosyl transferase family 4 ZYMOP_RS02240 PF01225 Mur ligase family, catalytic domain ZYMOP_RS02240 PF08245 Mur ligase middle domain ZYMOP_RS02240 PF02875 Mur ligase family, glutamate ligase domain ZYMOP_RS02245 PF02875 Mur ligase family, glutamate ligase domain ZYMOP_RS02245 PF01225 Mur ligase family, catalytic domain ZYMOP_RS02245 PF08245 Mur ligase middle domain ZYMOP_RS02250 PF03717 Penicillin-binding Protein dimerisation domain ZYMOP_RS02250 PF00905 Penicillin binding protein transpeptidase domain ZYMOP_RS02260 PF01795 MraW methylase family ZYMOP_RS02275 PF00291 Pyridoxal-phosphate dependent enzyme ZYMOP_RS02280 PF02769 AIR synthase related protein, C-terminal domain ZYMOP_RS02280 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ZYMOP_RS02280 PF00586 AIR synthase related protein, N-terminal domain ZYMOP_RS02285 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ZYMOP_RS02285 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ZYMOP_RS02285 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ZYMOP_RS02290 PF01242 6-pyruvoyl tetrahydropterin synthase ZYMOP_RS02305 PF02646 RmuC family ZYMOP_RS02310 PF01327 Polypeptide deformylase ZYMOP_RS02315 PF13662 Toprim domain ZYMOP_RS02315 PF02132 RecR protein ZYMOP_RS02320 PF00551 Formyl transferase ZYMOP_RS02320 PF02911 Formyl transferase, C-terminal domain ZYMOP_RS02325 PF01416 tRNA pseudouridine synthase ZYMOP_RS02330 PF02594 Uncharacterised ACR, YggU family COG1872 ZYMOP_RS02335 PF04055 Radical SAM superfamily ZYMOP_RS02335 PF18693 TRAM domain ZYMOP_RS02335 PF00919 Uncharacterized protein family UPF0004 ZYMOP_RS02340 PF02789 Cytosol aminopeptidase family, N-terminal domain ZYMOP_RS02340 PF00883 Cytosol aminopeptidase family, catalytic domain ZYMOP_RS02350 PF01118 Semialdehyde dehydrogenase, NAD binding domain ZYMOP_RS02360 PF01979 Amidohydrolase family ZYMOP_RS02365 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ZYMOP_RS02365 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ZYMOP_RS02370 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ZYMOP_RS02370 PF00034 Cytochrome c ZYMOP_RS02375 PF05199 GMC oxidoreductase ZYMOP_RS02375 PF00732 GMC oxidoreductase ZYMOP_RS02380 PF12318 Membrane bound FAD containing D-sorbitol dehydrogenase ZYMOP_RS02385 PF03652 Holliday junction resolvase ZYMOP_RS02390 PF02686 Glu-tRNAGln amidotransferase C subunit ZYMOP_RS02395 PF01425 Amidase ZYMOP_RS02400 PF02637 GatB domain ZYMOP_RS02400 PF02934 GatB/GatE catalytic domain ZYMOP_RS02405 PF03466 LysR substrate binding domain ZYMOP_RS02405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ZYMOP_RS02410 PF02321 Outer membrane efflux protein ZYMOP_RS02425 PF00753 Metallo-beta-lactamase superfamily ZYMOP_RS02440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ZYMOP_RS02440 PF03466 LysR substrate binding domain ZYMOP_RS02445 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ZYMOP_RS02450 PF03448 MgtE intracellular N domain ZYMOP_RS02450 PF01769 Divalent cation transporter ZYMOP_RS02450 PF00571 CBS domain ZYMOP_RS02470 PF08335 GlnD PII-uridylyltransferase ZYMOP_RS02470 PF01966 HD domain ZYMOP_RS02475 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ZYMOP_RS02475 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ZYMOP_RS02475 PF02824 TGS domain ZYMOP_RS02475 PF03129 Anticodon binding domain ZYMOP_RS02490 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ZYMOP_RS02495 PF00753 Metallo-beta-lactamase superfamily ZYMOP_RS02495 PF16123 Hydroxyacylglutathione hydrolase C-terminus ZYMOP_RS02520 PF00462 Glutaredoxin ZYMOP_RS02525 PF10090 Histidine phosphotransferase C-terminal domain ZYMOP_RS02535 PF00849 RNA pseudouridylate synthase ZYMOP_RS02540 PF00140 Sigma-70 factor, region 1.2 ZYMOP_RS02540 PF04542 Sigma-70 region 2 ZYMOP_RS02540 PF04545 Sigma-70, region 4 ZYMOP_RS02545 PF00291 Pyridoxal-phosphate dependent enzyme ZYMOP_RS02575 PF16658 Class II release factor RF3, C-terminal domain ZYMOP_RS02575 PF00009 Elongation factor Tu GTP binding domain ZYMOP_RS02575 PF03144 Elongation factor Tu domain 2 ZYMOP_RS02590 PF05690 Thiazole biosynthesis protein ThiG ZYMOP_RS02595 PF02597 ThiS family ZYMOP_RS02595 PF05690 Thiazole biosynthesis protein ThiG ZYMOP_RS02600 PF01220 Dehydroquinase class II ZYMOP_RS02605 PF00364 Biotin-requiring enzyme ZYMOP_RS02610 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ZYMOP_RS02610 PF02785 Biotin carboxylase C-terminal domain ZYMOP_RS02610 PF00289 Biotin carboxylase, N-terminal domain ZYMOP_RS02615 PF00459 Inositol monophosphatase family ZYMOP_RS02620 PF04998 RNA polymerase Rpb1, domain 5 ZYMOP_RS02620 PF05000 RNA polymerase Rpb1, domain 4 ZYMOP_RS02620 PF04983 RNA polymerase Rpb1, domain 3 ZYMOP_RS02620 PF00623 RNA polymerase Rpb1, domain 2 ZYMOP_RS02620 PF04997 RNA polymerase Rpb1, domain 1 ZYMOP_RS02625 PF04565 RNA polymerase Rpb2, domain 3 ZYMOP_RS02625 PF10385 RNA polymerase beta subunit external 1 domain ZYMOP_RS02625 PF04561 RNA polymerase Rpb2, domain 2 ZYMOP_RS02625 PF04563 RNA polymerase beta subunit ZYMOP_RS02625 PF00562 RNA polymerase Rpb2, domain 6 ZYMOP_RS02625 PF04560 RNA polymerase Rpb2, domain 7 ZYMOP_RS02630 PF00542 Ribosomal protein L7/L12 C-terminal domain ZYMOP_RS02630 PF16320 Ribosomal protein L7/L12 dimerisation domain ZYMOP_RS02635 PF00466 Ribosomal protein L10 ZYMOP_RS02640 PF00687 Ribosomal protein L1p/L10e family ZYMOP_RS02645 PF00298 Ribosomal protein L11, RNA binding domain ZYMOP_RS02645 PF03946 Ribosomal protein L11, N-terminal domain ZYMOP_RS02650 PF00467 KOW motif ZYMOP_RS02650 PF02357 Transcription termination factor nusG ZYMOP_RS02655 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ZYMOP_RS02665 PF05649 Peptidase family M13 ZYMOP_RS02665 PF01431 Peptidase family M13 ZYMOP_RS02670 PF01668 SmpB protein ZYMOP_RS02675 PF00701 Dihydrodipicolinate synthetase family ZYMOP_RS02680 PF01464 Transglycosylase SLT domain ZYMOP_RS02685 PF01272 Transcription elongation factor, GreA/GreB, C-term ZYMOP_RS02685 PF03449 Transcription elongation factor, N-terminal ZYMOP_RS02690 PF03976 Polyphosphate kinase 2 (PPK2) ZYMOP_RS02695 PF00152 tRNA synthetases class II (D, K and N) ZYMOP_RS02695 PF02938 GAD domain ZYMOP_RS02695 PF01336 OB-fold nucleic acid binding domain ZYMOP_RS02700 PF00570 HRDC domain ZYMOP_RS02700 PF01612 3'-5' exonuclease ZYMOP_RS02710 PF17941 Polyphosphate kinase C-terminal domain 1 ZYMOP_RS02710 PF13089 Polyphosphate kinase N-terminal domain ZYMOP_RS02710 PF02503 Polyphosphate kinase middle domain ZYMOP_RS02710 PF13090 Polyphosphate kinase C-terminal domain 2 ZYMOP_RS02725 PF00586 AIR synthase related protein, N-terminal domain ZYMOP_RS02725 PF02769 AIR synthase related protein, C-terminal domain ZYMOP_RS02730 PF00551 Formyl transferase ZYMOP_RS02735 PF01113 Dihydrodipicolinate reductase, N-terminus ZYMOP_RS02735 PF05173 Dihydrodipicolinate reductase, C-terminus ZYMOP_RS02740 PF00730 HhH-GPD superfamily base excision DNA repair protein ZYMOP_RS02740 PF10576 Iron-sulfur binding domain of endonuclease III ZYMOP_RS02740 PF00633 Helix-hairpin-helix motif ZYMOP_RS02750 PF00501 AMP-binding enzyme ZYMOP_RS02755 PF00326 Prolyl oligopeptidase family ZYMOP_RS02770 PF00893 Small Multidrug Resistance protein ZYMOP_RS02790 PF02566 OsmC-like protein ZYMOP_RS02795 PF03989 DNA gyrase C-terminal domain, beta-propeller ZYMOP_RS02795 PF00521 DNA gyrase/topoisomerase IV, subunit A ZYMOP_RS02800 PF01134 Glucose inhibited division protein A ZYMOP_RS02805 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ZYMOP_RS02805 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ZYMOP_RS02810 PF03547 Membrane transport protein ZYMOP_RS02815 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ZYMOP_RS02815 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ZYMOP_RS02815 PF00205 Thiamine pyrophosphate enzyme, central domain ZYMOP_RS02820 PF00873 AcrB/AcrD/AcrF family ZYMOP_RS02825 PF00529 HlyD membrane-fusion protein of T1SS ZYMOP_RS02825 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ZYMOP_RS02855 PF00180 Isocitrate/isopropylmalate dehydrogenase ZYMOP_RS02860 PF01053 Cys/Met metabolism PLP-dependent enzyme ZYMOP_RS02865 PF03466 LysR substrate binding domain ZYMOP_RS02865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ZYMOP_RS02875 PF02565 Recombination protein O C terminal ZYMOP_RS02875 PF11967 Recombination protein O N terminal ZYMOP_RS02880 PF02151 UvrB/uvrC motif ZYMOP_RS02880 PF12826 Helix-hairpin-helix motif ZYMOP_RS02880 PF08459 UvrC Helix-hairpin-helix N-terminal ZYMOP_RS02880 PF01541 GIY-YIG catalytic domain ZYMOP_RS02885 PF00430 ATP synthase B/B' CF(0) ZYMOP_RS02890 PF00430 ATP synthase B/B' CF(0) ZYMOP_RS02900 PF00119 ATP synthase A chain ZYMOP_RS02905 PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter ZYMOP_RS02925 PF04002 RadC-like JAB domain ZYMOP_RS02930 PF00206 Lyase ZYMOP_RS02930 PF10397 Adenylosuccinate lyase C-terminus ZYMOP_RS02935 PF00684 DnaJ central domain ZYMOP_RS02935 PF00226 DnaJ domain ZYMOP_RS02935 PF01556 DnaJ C terminal domain ZYMOP_RS02940 PF00012 Hsp70 protein ZYMOP_RS02950 PF07687 Peptidase dimerisation domain ZYMOP_RS02950 PF01546 Peptidase family M20/M25/M40 ZYMOP_RS02955 PF04958 Arginine N-succinyltransferase beta subunit ZYMOP_RS02960 PF00156 Phosphoribosyl transferase domain ZYMOP_RS02965 PF00962 Adenosine/AMP deaminase ZYMOP_RS02970 PF01522 Polysaccharide deacetylase ZYMOP_RS02975 PF01594 AI-2E family transporter ZYMOP_RS02985 PF02465 Flagellar hook-associated protein 2 N-terminus ZYMOP_RS02985 PF07195 Flagellar hook-associated protein 2 C-terminus ZYMOP_RS02990 PF01312 FlhB HrpN YscU SpaS Family ZYMOP_RS02995 PF01311 Bacterial export proteins, family 1 ZYMOP_RS03000 PF01313 Bacterial export proteins, family 3 ZYMOP_RS03005 PF00813 FliP family ZYMOP_RS03015 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ZYMOP_RS03040 PF18269 T3SS EscN ATPase C-terminal domain ZYMOP_RS03040 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ZYMOP_RS03050 PF14842 FliG N-terminal domain ZYMOP_RS03050 PF14841 FliG middle domain ZYMOP_RS03050 PF01706 FliG C-terminal domain ZYMOP_RS03055 PF08345 Flagellar M-ring protein C-terminal ZYMOP_RS03055 PF01514 Secretory protein of YscJ/FliF family ZYMOP_RS03060 PF02049 Flagellar hook-basal body complex protein FliE ZYMOP_RS03065 PF00158 Sigma-54 interaction domain ZYMOP_RS03065 PF02954 Bacterial regulatory protein, Fis family ZYMOP_RS03065 PF00072 Response regulator receiver domain ZYMOP_RS03070 PF00669 Bacterial flagellin N-terminal helical region ZYMOP_RS03070 PF00700 Bacterial flagellin C-terminal helical region ZYMOP_RS03070 PF00669 Bacterial flagellin N-terminal helical region ZYMOP_RS03070 PF00700 Bacterial flagellin C-terminal helical region ZYMOP_RS03085 PF04545 Sigma-70, region 4 ZYMOP_RS03085 PF04539 Sigma-70 region 3 ZYMOP_RS03085 PF04542 Sigma-70 region 2 ZYMOP_RS03090 PF10609 NUBPL iron-transfer P-loop NTPase ZYMOP_RS03095 PF00771 FHIPEP family ZYMOP_RS03120 PF01618 MotA/TolQ/ExbB proton channel family ZYMOP_RS03130 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ZYMOP_RS03130 PF00460 Flagella basal body rod protein ZYMOP_RS03135 PF13860 FlgD Ig-like domain ZYMOP_RS03135 PF13861 FlgD Tudor-like domain ZYMOP_RS03135 PF03963 Flagellar hook capping protein - N-terminal region ZYMOP_RS03140 PF00460 Flagella basal body rod protein ZYMOP_RS03140 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ZYMOP_RS03140 PF07559 Flagellar basal body protein FlaE ZYMOP_RS03140 PF07196 Flagellin hook IN motif ZYMOP_RS03145 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ZYMOP_RS03145 PF00460 Flagella basal body rod protein ZYMOP_RS03150 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ZYMOP_RS03150 PF00460 Flagella basal body rod protein ZYMOP_RS03155 PF02107 Flagellar L-ring protein ZYMOP_RS03160 PF02119 Flagellar P-ring protein ZYMOP_RS03180 PF01618 MotA/TolQ/ExbB proton channel family ZYMOP_RS03185 PF13677 Membrane MotB of proton-channel complex MotA/MotB ZYMOP_RS03185 PF00691 OmpA family ZYMOP_RS03190 PF08448 PAS fold ZYMOP_RS03190 PF00072 Response regulator receiver domain ZYMOP_RS03190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ZYMOP_RS03190 PF13188 PAS domain ZYMOP_RS03190 PF00512 His Kinase A (phospho-acceptor) domain ZYMOP_RS03195 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ZYMOP_RS03200 PF00589 Phage integrase family ZYMOP_RS03200 PF02899 Phage integrase, N-terminal SAM-like domain ZYMOP_RS03210 PF01202 Shikimate kinase ZYMOP_RS03215 PF01761 3-dehydroquinate synthase ZYMOP_RS03235 PF06745 KaiC ZYMOP_RS03235 PF18073 Rubredoxin metal binding domain ZYMOP_RS03245 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ZYMOP_RS03250 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ZYMOP_RS03255 PF00291 Pyridoxal-phosphate dependent enzyme ZYMOP_RS03260 PF00290 Tryptophan synthase alpha chain ZYMOP_RS03265 PF01039 Carboxyl transferase domain ZYMOP_RS03265 PF17848 Acetyl-coA carboxylase zinc finger domain ZYMOP_RS03270 PF02875 Mur ligase family, glutamate ligase domain ZYMOP_RS03270 PF08245 Mur ligase middle domain ZYMOP_RS03275 PF07690 Major Facilitator Superfamily ZYMOP_RS03285 PF00375 Sodium:dicarboxylate symporter family ZYMOP_RS03290 PF00849 RNA pseudouridylate synthase ZYMOP_RS03290 PF01479 S4 domain ZYMOP_RS03300 PF00580 UvrD/REP helicase N-terminal domain ZYMOP_RS03300 PF13361 UvrD-like helicase C-terminal domain ZYMOP_RS03305 PF13417 Glutathione S-transferase, N-terminal domain ZYMOP_RS03305 PF04399 Glutaredoxin 2, C terminal domain ZYMOP_RS03310 PF00005 ABC transporter ZYMOP_RS03315 PF00528 Binding-protein-dependent transport system inner membrane component ZYMOP_RS03320 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain ZYMOP_RS03320 PF10091 Putative glucoamylase ZYMOP_RS03320 PF06165 Glycosyltransferase family 36 ZYMOP_RS03345 PF02629 CoA binding domain ZYMOP_RS03345 PF00549 CoA-ligase ZYMOP_RS03355 PF00271 Helicase conserved C-terminal domain ZYMOP_RS03355 PF04408 Helicase associated domain (HA2) ZYMOP_RS03355 PF08482 ATP-dependent helicase C-terminal ZYMOP_RS03355 PF00270 DEAD/DEAH box helicase ZYMOP_RS03360 PF00348 Polyprenyl synthetase ZYMOP_RS03365 PF01817 Chorismate mutase type II ZYMOP_RS03365 PF02153 Prephenate dehydrogenase ZYMOP_RS03370 PF00155 Aminotransferase class I and II ZYMOP_RS03380 PF07995 Glucose / Sorbosone dehydrogenase ZYMOP_RS03385 PF17384 RimP C-terminal SH3 domain ZYMOP_RS03385 PF02576 RimP N-terminal domain ZYMOP_RS03390 PF13184 NusA-like KH domain ZYMOP_RS03390 PF00575 S1 RNA binding domain ZYMOP_RS03390 PF08529 NusA N-terminal domain ZYMOP_RS03400 PF00009 Elongation factor Tu GTP binding domain ZYMOP_RS03400 PF08364 Bacterial translation initiation factor IF-2 associated region ZYMOP_RS03400 PF11987 Translation-initiation factor 2 ZYMOP_RS03400 PF04760 Translation initiation factor IF-2, N-terminal region ZYMOP_RS03405 PF02033 Ribosome-binding factor A ZYMOP_RS03410 PF00265 Thymidine kinase ZYMOP_RS03415 PF16198 tRNA pseudouridylate synthase B C-terminal domain ZYMOP_RS03415 PF01509 TruB family pseudouridylate synthase (N terminal domain) ZYMOP_RS03420 PF00312 Ribosomal protein S15 ZYMOP_RS03425 PF03725 3' exoribonuclease family, domain 2 ZYMOP_RS03425 PF01138 3' exoribonuclease family, domain 1 ZYMOP_RS03425 PF00013 KH domain ZYMOP_RS03425 PF00575 S1 RNA binding domain ZYMOP_RS03425 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ZYMOP_RS03430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ZYMOP_RS03430 PF12282 Signal transduction histidine kinase ZYMOP_RS03430 PF07568 Histidine kinase ZYMOP_RS03435 PF00654 Voltage gated chloride channel ZYMOP_RS03445 PF00916 Sulfate permease family ZYMOP_RS03445 PF01740 STAS domain ZYMOP_RS03450 PF07690 Major Facilitator Superfamily ZYMOP_RS03455 PF00218 Indole-3-glycerol phosphate synthase ZYMOP_RS03460 PF00180 Isocitrate/isopropylmalate dehydrogenase ZYMOP_RS03465 PF00330 Aconitase family (aconitate hydratase) ZYMOP_RS03465 PF00694 Aconitase C-terminal domain ZYMOP_RS03475 PF01196 Ribosomal protein L17 ZYMOP_RS03480 PF01000 RNA polymerase Rpb3/RpoA insert domain ZYMOP_RS03480 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ZYMOP_RS03480 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ZYMOP_RS03485 PF00411 Ribosomal protein S11 ZYMOP_RS03490 PF00416 Ribosomal protein S13/S18 ZYMOP_RS03495 PF05191 Adenylate kinase, active site lid ZYMOP_RS03500 PF00344 SecY translocase ZYMOP_RS03505 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ZYMOP_RS03510 PF00327 Ribosomal protein L30p/L7e ZYMOP_RS03515 PF03719 Ribosomal protein S5, C-terminal domain ZYMOP_RS03515 PF00333 Ribosomal protein S5, N-terminal domain ZYMOP_RS03520 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ZYMOP_RS03525 PF00347 Ribosomal protein L6 ZYMOP_RS03530 PF00410 Ribosomal protein S8 ZYMOP_RS03535 PF00253 Ribosomal protein S14p/S29e ZYMOP_RS03540 PF00281 Ribosomal protein L5 ZYMOP_RS03540 PF00673 ribosomal L5P family C-terminus ZYMOP_RS03545 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ZYMOP_RS03545 PF00467 KOW motif ZYMOP_RS03550 PF00238 Ribosomal protein L14p/L23e ZYMOP_RS03555 PF00366 Ribosomal protein S17 ZYMOP_RS03560 PF00831 Ribosomal L29 protein ZYMOP_RS03565 PF00252 Ribosomal protein L16p/L10e ZYMOP_RS03570 PF07650 KH domain ZYMOP_RS03570 PF00189 Ribosomal protein S3, C-terminal domain ZYMOP_RS03575 PF00237 Ribosomal protein L22p/L17e ZYMOP_RS03580 PF00203 Ribosomal protein S19 ZYMOP_RS03585 PF00181 Ribosomal Proteins L2, RNA binding domain ZYMOP_RS03585 PF03947 Ribosomal Proteins L2, C-terminal domain ZYMOP_RS03590 PF00276 Ribosomal protein L23 ZYMOP_RS03595 PF00573 Ribosomal protein L4/L1 family ZYMOP_RS03600 PF00297 Ribosomal protein L3 ZYMOP_RS03605 PF00338 Ribosomal protein S10p/S20e ZYMOP_RS03610 PF00009 Elongation factor Tu GTP binding domain ZYMOP_RS03610 PF03143 Elongation factor Tu C-terminal domain ZYMOP_RS03610 PF03144 Elongation factor Tu domain 2 ZYMOP_RS03615 PF00009 Elongation factor Tu GTP binding domain ZYMOP_RS03615 PF14492 Elongation Factor G, domain II ZYMOP_RS03615 PF03764 Elongation factor G, domain IV ZYMOP_RS03615 PF03144 Elongation factor Tu domain 2 ZYMOP_RS03615 PF00679 Elongation factor G C-terminus ZYMOP_RS03620 PF00177 Ribosomal protein S7p/S5e ZYMOP_RS03625 PF00164 Ribosomal protein S12/S23 ZYMOP_RS03635 PF07992 Pyridine nucleotide-disulphide oxidoreductase ZYMOP_RS03635 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ZYMOP_RS03640 PF03061 Thioesterase superfamily ZYMOP_RS03645 PF00364 Biotin-requiring enzyme ZYMOP_RS03645 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ZYMOP_RS03645 PF02817 e3 binding domain ZYMOP_RS03660 PF13185 GAF domain ZYMOP_RS03665 PF00472 RF-1 domain ZYMOP_RS03670 PF00849 RNA pseudouridylate synthase ZYMOP_RS03675 PF00535 Glycosyl transferase family 2 ZYMOP_RS03675 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 ZYMOP_RS03695 PF00912 Transglycosylase ZYMOP_RS03695 PF00905 Penicillin binding protein transpeptidase domain ZYMOP_RS03700 PF12804 MobA-like NTP transferase domain ZYMOP_RS03700 PF00132 Bacterial transferase hexapeptide (six repeats) ZYMOP_RS03705 PF13419 Haloacid dehalogenase-like hydrolase ZYMOP_RS03710 PF07244 Surface antigen variable number repeat ZYMOP_RS03710 PF01103 Surface antigen ZYMOP_RS03710 PF17243 POTRA domain TamA domain 1 ZYMOP_RS03720 PF07690 Major Facilitator Superfamily ZYMOP_RS03725 PF00120 Glutamine synthetase, catalytic domain ZYMOP_RS03725 PF03951 Glutamine synthetase, beta-Grasp domain ZYMOP_RS03730 PF00543 Nitrogen regulatory protein P-II ZYMOP_RS03735 PF00557 Metallopeptidase family M24 ZYMOP_RS03735 PF01321 Creatinase/Prolidase N-terminal domain ZYMOP_RS03740 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain ZYMOP_RS03740 PF00326 Prolyl oligopeptidase family ZYMOP_RS03760 PF03328 HpcH/HpaI aldolase/citrate lyase family ZYMOP_RS03770 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ZYMOP_RS03770 PF02770 Acyl-CoA dehydrogenase, middle domain ZYMOP_RS03770 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ZYMOP_RS03775 PF02308 MgtC family ZYMOP_RS03780 PF00742 Homoserine dehydrogenase ZYMOP_RS03780 PF03447 Homoserine dehydrogenase, NAD binding domain ZYMOP_RS03780 PF01842 ACT domain ZYMOP_RS03785 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded ZYMOP_RS03795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ZYMOP_RS03795 PF00512 His Kinase A (phospho-acceptor) domain ZYMOP_RS03795 PF16736 Single Cache-like ZYMOP_RS03795 PF00989 PAS fold ZYMOP_RS03805 PF00486 Transcriptional regulatory protein, C terminal ZYMOP_RS03805 PF00072 Response regulator receiver domain ZYMOP_RS03815 PF01872 RibD C-terminal domain ZYMOP_RS03815 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ZYMOP_RS03820 PF00677 Lumazine binding domain ZYMOP_RS03825 PF00925 GTP cyclohydrolase II ZYMOP_RS03825 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ZYMOP_RS03830 PF00885 6,7-dimethyl-8-ribityllumazine synthase ZYMOP_RS03840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ZYMOP_RS03840 PF03466 LysR substrate binding domain ZYMOP_RS03850 PF00425 chorismate binding enzyme ZYMOP_RS03850 PF04715 Anthranilate synthase component I, N terminal region ZYMOP_RS03855 PF13145 PPIC-type PPIASE domain ZYMOP_RS03860 PF00121 Triosephosphate isomerase ZYMOP_RS03870 PF06418 CTP synthase N-terminus ZYMOP_RS03870 PF00117 Glutamine amidotransferase class-I ZYMOP_RS03875 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ZYMOP_RS03875 PF03129 Anticodon binding domain ZYMOP_RS03880 PF12704 MacB-like periplasmic core domain ZYMOP_RS03880 PF02687 FtsX-like permease family ZYMOP_RS03885 PF00005 ABC transporter ZYMOP_RS03890 PF01037 Lrp/AsnC ligand binding domain ZYMOP_RS03895 PF00175 Oxidoreductase NAD-binding domain ZYMOP_RS03895 PF00111 2Fe-2S iron-sulfur cluster binding domain ZYMOP_RS03905 PF01926 50S ribosome-binding GTPase ZYMOP_RS03905 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ZYMOP_RS03910 PF13360 PQQ-like domain ZYMOP_RS03910 PF13570 PQQ-like domain ZYMOP_RS03935 PF03062 MBOAT, membrane-bound O-acyltransferase family ZYMOP_RS03950 PF00268 Ribonucleotide reductase, small chain ZYMOP_RS03955 PF13419 Haloacid dehalogenase-like hydrolase ZYMOP_RS03970 PF01479 S4 domain ZYMOP_RS03970 PF00849 RNA pseudouridylate synthase ZYMOP_RS03990 PF00625 Guanylate kinase ZYMOP_RS03995 PF00132 Bacterial transferase hexapeptide (six repeats) ZYMOP_RS03995 PF14602 Hexapeptide repeat of succinyl-transferase ZYMOP_RS03995 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal ZYMOP_RS04005 PF01521 Iron-sulphur cluster biosynthesis ZYMOP_RS04010 PF01883 Iron-sulfur cluster assembly protein ZYMOP_RS04015 PF00266 Aminotransferase class-V ZYMOP_RS04020 PF01458 Uncharacterized protein family (UPF0051) ZYMOP_RS04025 PF00005 ABC transporter ZYMOP_RS04030 PF01458 Uncharacterized protein family (UPF0051) ZYMOP_RS04045 PF00155 Aminotransferase class I and II ZYMOP_RS04050 PF02153 Prephenate dehydrogenase ZYMOP_RS04055 PF01553 Acyltransferase ZYMOP_RS04070 PF00005 ABC transporter ZYMOP_RS04080 PF02325 YGGT family ZYMOP_RS04085 PF01914 MarC family integral membrane protein ZYMOP_RS04090 PF01751 Toprim domain ZYMOP_RS04090 PF00986 DNA gyrase B subunit, carboxyl terminus ZYMOP_RS04090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ZYMOP_RS04090 PF00204 DNA gyrase B ZYMOP_RS04095 PF01430 Hsp33 protein ZYMOP_RS04100 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ZYMOP_RS04100 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ZYMOP_RS04105 PF00202 Aminotransferase class-III ZYMOP_RS04120 PF00004 ATPase family associated with various cellular activities (AAA) ZYMOP_RS04120 PF07724 AAA domain (Cdc48 subfamily) ZYMOP_RS04120 PF10431 C-terminal, D2-small domain, of ClpB protein ZYMOP_RS04120 PF02861 Clp amino terminal domain, pathogenicity island component ZYMOP_RS04120 PF17871 AAA lid domain ZYMOP_RS04130 PF02541 Ppx/GppA phosphatase family ZYMOP_RS04135 PF01728 FtsJ-like methyltransferase ZYMOP_RS04140 PF13188 PAS domain ZYMOP_RS04140 PF03707 Bacterial signalling protein N terminal repeat ZYMOP_RS04140 PF00990 Diguanylate cyclase, GGDEF domain ZYMOP_RS04140 PF00563 EAL domain ZYMOP_RS04240 PF00730 HhH-GPD superfamily base excision DNA repair protein ZYMOP_RS04255 PF02435 Levansucrase/Invertase ZYMOP_RS04260 PF02435 Levansucrase/Invertase ZYMOP_RS04270 PF02685 Glucokinase ZYMOP_RS04275 PF00920 Dehydratase family ZYMOP_RS04280 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain ZYMOP_RS04280 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain ZYMOP_RS04285 PF00083 Sugar (and other) transporter ZYMOP_RS04290 PF00533 BRCA1 C Terminus (BRCT) domain ZYMOP_RS04290 PF03120 NAD-dependent DNA ligase OB-fold domain ZYMOP_RS04290 PF12826 Helix-hairpin-helix motif ZYMOP_RS04290 PF01653 NAD-dependent DNA ligase adenylation domain ZYMOP_RS04290 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ZYMOP_RS04295 PF01702 Queuine tRNA-ribosyltransferase ZYMOP_RS04300 PF02151 UvrB/uvrC motif ZYMOP_RS04300 PF12344 Ultra-violet resistance protein B ZYMOP_RS04300 PF04851 Type III restriction enzyme, res subunit ZYMOP_RS04300 PF00271 Helicase conserved C-terminal domain ZYMOP_RS04300 PF17757 UvrB interaction domain ZYMOP_RS04310 PF01098 Cell cycle protein ZYMOP_RS04315 PF00905 Penicillin binding protein transpeptidase domain ZYMOP_RS04315 PF03717 Penicillin-binding Protein dimerisation domain ZYMOP_RS04325 PF04085 rod shape-determining protein MreC ZYMOP_RS04335 PF01119 DNA mismatch repair protein, C-terminal domain ZYMOP_RS04335 PF08676 MutL C terminal dimerisation domain ZYMOP_RS04340 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ZYMOP_RS04350 PF13086 AAA domain ZYMOP_RS04350 PF13087 AAA domain ZYMOP_RS04350 PF13086 AAA domain ZYMOP_RS04350 PF13195 Protein of unknown function (DUF4011) ZYMOP_RS04350 PF13087 AAA domain ZYMOP_RS04350 PF13195 Protein of unknown function (DUF4011) ZYMOP_RS04360 PF02622 Uncharacterized ACR, COG1678 ZYMOP_RS04365 PF13167 GTP-binding GTPase N-terminal ZYMOP_RS04365 PF16360 GTP-binding GTPase Middle Region ZYMOP_RS04365 PF01926 50S ribosome-binding GTPase ZYMOP_RS04370 PF17209 Hfq protein ZYMOP_RS04375 PF00909 Ammonium Transporter Family ZYMOP_RS04385 PF01523 Putative modulator of DNA gyrase ZYMOP_RS04395 PF00155 Aminotransferase class I and II ZYMOP_RS04400 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ZYMOP_RS04400 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ZYMOP_RS04400 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ZYMOP_RS04400 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ZYMOP_RS04410 PF13614 AAA domain ZYMOP_RS04415 PF02581 Thiamine monophosphate synthase ZYMOP_RS04420 PF05951 Bacterial protein of unknown function (DUF882) ZYMOP_RS04425 PF00459 Inositol monophosphatase family ZYMOP_RS04430 PF01132 Elongation factor P (EF-P) OB domain ZYMOP_RS04430 PF08207 Elongation factor P (EF-P) KOW-like domain ZYMOP_RS04430 PF09285 Elongation factor P, C-terminal ZYMOP_RS04440 PF14489 QueF-like protein ZYMOP_RS04450 PF01252 Signal peptidase (SPase) II ZYMOP_RS04455 PF00133 tRNA synthetases class I (I, L, M and V) ZYMOP_RS04455 PF08264 Anticodon-binding domain of tRNA ZYMOP_RS04460 PF01687 Riboflavin kinase ZYMOP_RS04460 PF06574 FAD synthetase ZYMOP_RS04465 PF00186 Dihydrofolate reductase ZYMOP_RS04490 PF13091 PLD-like domain ZYMOP_RS04490 PF13396 Phospholipase_D-nuclease N-terminal ZYMOP_RS04500 PF01546 Peptidase family M20/M25/M40 ZYMOP_RS04500 PF07687 Peptidase dimerisation domain ZYMOP_RS04505 PF14748 Pyrroline-5-carboxylate reductase dimerisation ZYMOP_RS04505 PF03807 NADP oxidoreductase coenzyme F420-dependent ZYMOP_RS04515 PF05159 Capsule polysaccharide biosynthesis protein ZYMOP_RS04520 PF00534 Glycosyl transferases group 1 ZYMOP_RS04520 PF13439 Glycosyltransferase Family 4 ZYMOP_RS04530 PF00248 Aldo/keto reductase family ZYMOP_RS04535 PF12833 Helix-turn-helix domain ZYMOP_RS04535 PF06719 AraC-type transcriptional regulator N-terminus ZYMOP_RS04540 PF00762 Ferrochelatase ZYMOP_RS04555 PF13742 OB-fold nucleic acid binding domain ZYMOP_RS04555 PF02601 Exonuclease VII, large subunit ZYMOP_RS04560 PF02843 Phosphoribosylglycinamide synthetase, C domain ZYMOP_RS04560 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ZYMOP_RS04560 PF02844 Phosphoribosylglycinamide synthetase, N domain ZYMOP_RS04570 PF03471 Transporter associated domain ZYMOP_RS04570 PF03741 Integral membrane protein TerC family ZYMOP_RS04575 PF14437 MafB19-like deaminase ZYMOP_RS04580 PF00830 Ribosomal L28 family ZYMOP_RS04585 PF00083 Sugar (and other) transporter ZYMOP_RS04590 PF01790 Prolipoprotein diacylglyceryl transferase ZYMOP_RS04595 PF04286 Protein of unknown function (DUF445) ZYMOP_RS04600 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ZYMOP_RS04610 PF02321 Outer membrane efflux protein ZYMOP_RS04615 PF00873 AcrB/AcrD/AcrF family ZYMOP_RS04620 PF00529 HlyD membrane-fusion protein of T1SS ZYMOP_RS04620 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ZYMOP_RS04630 PF01979 Amidohydrolase family ZYMOP_RS04635 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ZYMOP_RS04635 PF08501 Shikimate dehydrogenase substrate binding domain ZYMOP_RS04635 PF01488 Shikimate / quinate 5-dehydrogenase ZYMOP_RS04640 PF00313 'Cold-shock' DNA-binding domain ZYMOP_RS04660 PF00005 ABC transporter ZYMOP_RS04665 PF04963 Sigma-54 factor, core binding domain ZYMOP_RS04665 PF00309 Sigma-54 factor, Activator interacting domain (AID) ZYMOP_RS04665 PF04552 Sigma-54, DNA binding domain ZYMOP_RS04670 PF00438 S-adenosylmethionine synthetase, N-terminal domain ZYMOP_RS04670 PF02773 S-adenosylmethionine synthetase, C-terminal domain ZYMOP_RS04670 PF02772 S-adenosylmethionine synthetase, central domain ZYMOP_RS04675 PF00795 Carbon-nitrogen hydrolase ZYMOP_RS04680 PF03379 CcmB protein ZYMOP_RS04685 PF00005 ABC transporter ZYMOP_RS04690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ZYMOP_RS04695 PF00072 Response regulator receiver domain ZYMOP_RS04695 PF00486 Transcriptional regulatory protein, C terminal ZYMOP_RS04700 PF01565 FAD binding domain ZYMOP_RS04700 PF09330 D-lactate dehydrogenase, membrane binding ZYMOP_RS04710 PF00005 ABC transporter ZYMOP_RS04710 PF00664 ABC transporter transmembrane region ZYMOP_RS04710 PF03412 Peptidase C39 family ZYMOP_RS04740 PF00072 Response regulator receiver domain ZYMOP_RS04745 PF00471 Ribosomal protein L33 ZYMOP_RS04750 PF00210 Ferritin-like domain ZYMOP_RS04755 PF00004 ATPase family associated with various cellular activities (AAA) ZYMOP_RS04755 PF10431 C-terminal, D2-small domain, of ClpB protein ZYMOP_RS04755 PF07724 AAA domain (Cdc48 subfamily) ZYMOP_RS04760 PF00227 Proteasome subunit ZYMOP_RS04765 PF00216 Bacterial DNA-binding protein ZYMOP_RS04775 PF08331 Domain of unknown function (DUF1730) ZYMOP_RS04780 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ZYMOP_RS04785 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ZYMOP_RS04785 PF02874 ATP synthase alpha/beta family, beta-barrel domain ZYMOP_RS04790 PF00231 ATP synthase ZYMOP_RS04795 PF02874 ATP synthase alpha/beta family, beta-barrel domain ZYMOP_RS04795 PF00306 ATP synthase alpha/beta chain, C terminal domain ZYMOP_RS04795 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ZYMOP_RS04800 PF00213 ATP synthase delta (OSCP) subunit ZYMOP_RS04805 PF10609 NUBPL iron-transfer P-loop NTPase ZYMOP_RS04810 PF13180 PDZ domain ZYMOP_RS04820 PF00588 SpoU rRNA Methylase family ZYMOP_RS04820 PF08032 RNA 2'-O ribose methyltransferase substrate binding ZYMOP_RS04830 PF00005 ABC transporter ZYMOP_RS04835 PF01032 FecCD transport family ZYMOP_RS04845 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ZYMOP_RS04845 PF01612 3'-5' exonuclease ZYMOP_RS04845 PF01367 5'-3' exonuclease, C-terminal SAM fold ZYMOP_RS04845 PF00476 DNA polymerase family A ZYMOP_RS04850 PF00106 short chain dehydrogenase ZYMOP_RS04855 PF00561 alpha/beta hydrolase fold ZYMOP_RS04860 PF07021 Methionine biosynthesis protein MetW ZYMOP_RS04860 PF00561 alpha/beta hydrolase fold ZYMOP_RS04865 PF02559 CarD-like/TRCF domain ZYMOP_RS04870 PF00037 4Fe-4S binding domain ZYMOP_RS04870 PF11953 Domain of unknown function (DUF3470) ZYMOP_RS04875 PF00271 Helicase conserved C-terminal domain ZYMOP_RS04875 PF00270 DEAD/DEAH box helicase ZYMOP_RS04875 PF08148 DSHCT (NUC185) domain ZYMOP_RS04880 PF04225 Opacity-associated protein A LysM-like domain ZYMOP_RS04880 PF01551 Peptidase family M23 ZYMOP_RS04895 PF00829 Ribosomal prokaryotic L21 protein ZYMOP_RS04900 PF01016 Ribosomal L27 protein ZYMOP_RS04910 PF01018 GTP1/OBG ZYMOP_RS04910 PF01926 50S ribosome-binding GTPase ZYMOP_RS04915 PF01472 PUA domain ZYMOP_RS04915 PF00696 Amino acid kinase family ZYMOP_RS04920 PF01370 NAD dependent epimerase/dehydratase family ZYMOP_RS04930 PF13411 MerR HTH family regulatory protein ZYMOP_RS04945 PF00148 Nitrogenase component 1 type Oxidoreductase ZYMOP_RS04950 PF03139 Vanadium/alternative nitrogenase delta subunit ZYMOP_RS04955 PF00148 Nitrogenase component 1 type Oxidoreductase ZYMOP_RS04960 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family ZYMOP_RS04965 PF01590 GAF domain ZYMOP_RS04965 PF02954 Bacterial regulatory protein, Fis family ZYMOP_RS04965 PF00158 Sigma-54 interaction domain ZYMOP_RS04975 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ZYMOP_RS04975 PF00672 HAMP domain ZYMOP_RS04975 PF02203 Tar ligand binding domain homologue ZYMOP_RS04980 PF00672 HAMP domain ZYMOP_RS04980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ZYMOP_RS04985 PF00117 Glutamine amidotransferase class-I ZYMOP_RS04990 PF00591 Glycosyl transferase family, a/b domain ZYMOP_RS04990 PF02885 Glycosyl transferase family, helical bundle domain ZYMOP_RS04995 PF00717 Peptidase S24-like ZYMOP_RS04995 PF01726 LexA DNA binding domain ZYMOP_RS05000 PF00472 RF-1 domain ZYMOP_RS05000 PF03462 PCRF domain ZYMOP_RS05005 PF17092 Penicillin-binding protein OB-like domain ZYMOP_RS05005 PF00912 Transglycosylase ZYMOP_RS05005 PF00905 Penicillin binding protein transpeptidase domain ZYMOP_RS05010 PF01520 N-acetylmuramoyl-L-alanine amidase ZYMOP_RS05015 PF10150 Ribonuclease E/G family ZYMOP_RS05015 PF12111 Polyribonucleotide phosphorylase C terminal ZYMOP_RS05015 PF00575 S1 RNA binding domain ZYMOP_RS05035 PF03315 Serine dehydratase beta chain ZYMOP_RS05035 PF03313 Serine dehydratase alpha chain ZYMOP_RS05040 PF00593 TonB dependent receptor ZYMOP_RS05040 PF07660 Secretin and TonB N terminus short domain ZYMOP_RS05040 PF07715 TonB-dependent Receptor Plug Domain ZYMOP_RS05050 PF01474 Class-II DAHP synthetase family ZYMOP_RS05055 PF01406 tRNA synthetases class I (C) catalytic domain ZYMOP_RS05065 PF12848 ABC transporter ZYMOP_RS05065 PF00005 ABC transporter ZYMOP_RS05075 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ZYMOP_RS05075 PF05221 S-adenosyl-L-homocysteine hydrolase ZYMOP_RS05080 PF04551 GcpE protein ZYMOP_RS05085 PF01791 DeoC/LacD family aldolase ZYMOP_RS05090 PF00162 Phosphoglycerate kinase ZYMOP_RS05095 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ZYMOP_RS05095 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ZYMOP_RS05100 PF02780 Transketolase, C-terminal domain ZYMOP_RS05100 PF00456 Transketolase, thiamine diphosphate binding domain ZYMOP_RS05100 PF02779 Transketolase, pyrimidine binding domain ZYMOP_RS05120 PF01609 Transposase DDE domain ZYMOP_RS05125 PF13667 ThiC-associated domain ZYMOP_RS05125 PF01964 Radical SAM ThiC family ZYMOP_RS05135 PF03009 Glycerophosphoryl diester phosphodiesterase family ZYMOP_RS05140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ZYMOP_RS05140 PF03466 LysR substrate binding domain ZYMOP_RS05145 PF00920 Dehydratase family ZYMOP_RS05195 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) ZYMOP_RS05200 PF01867 CRISPR associated protein Cas1 ZYMOP_RS05215 PF09344 CT1975-like protein ZYMOP_RS05230 PF00271 Helicase conserved C-terminal domain ZYMOP_RS05230 PF00270 DEAD/DEAH box helicase ZYMOP_RS05230 PF18019 HD domain ZYMOP_RS05235 PF02677 Epoxyqueuosine reductase QueH ZYMOP_RS05240 PF01177 Asp/Glu/Hydantoin racemase ZYMOP_RS05245 PF01037 Lrp/AsnC ligand binding domain ZYMOP_RS05250 PF02086 D12 class N6 adenine-specific DNA methyltransferase ZYMOP_RS05255 PF09233 Restriction endonuclease EcoRV ZYMOP_RS05265 PF02796 Helix-turn-helix domain of resolvase ZYMOP_RS05265 PF00239 Resolvase, N terminal domain ZYMOP_RS05270 PF02525 Flavodoxin-like fold ZYMOP_RS05280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ZYMOP_RS05280 PF03466 LysR substrate binding domain ZYMOP_RS05300 PF01943 Polysaccharide biosynthesis protein ZYMOP_RS05315 PF13417 Glutathione S-transferase, N-terminal domain ZYMOP_RS05315 PF00043 Glutathione S-transferase, C-terminal domain ZYMOP_RS05320 PF02342 TerD domain ZYMOP_RS05330 PF02342 TerD domain ZYMOP_RS05335 PF02342 TerD domain ZYMOP_RS05350 PF00691 OmpA family ZYMOP_RS05355 PF07676 WD40-like Beta Propeller Repeat ZYMOP_RS05355 PF04052 TolB amino-terminal domain ZYMOP_RS05365 PF02472 Biopolymer transport protein ExbD/TolR ZYMOP_RS05370 PF01618 MotA/TolQ/ExbB proton channel family ZYMOP_RS05375 PF03061 Thioesterase superfamily ZYMOP_RS05380 PF05496 Holliday junction DNA helicase RuvB P-loop domain ZYMOP_RS05380 PF05491 RuvB C-terminal winged helix domain ZYMOP_RS05380 PF17864 RuvB AAA lid domain ZYMOP_RS05385 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ZYMOP_RS05385 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ZYMOP_RS05395 PF01330 RuvA N terminal domain ZYMOP_RS05395 PF07499 RuvA, C-terminal domain ZYMOP_RS05400 PF02075 Crossover junction endodeoxyribonuclease RuvC ZYMOP_RS05405 PF01709 Transcriptional regulator ZYMOP_RS05410 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) ZYMOP_RS05415 PF00224 Pyruvate kinase, barrel domain ZYMOP_RS05415 PF02887 Pyruvate kinase, alpha/beta domain ZYMOP_RS05420 PF02390 Putative methyltransferase ZYMOP_RS05435 PF00890 FAD binding domain ZYMOP_RS05435 PF02910 Fumarate reductase flavoprotein C-term ZYMOP_RS05440 PF00005 ABC transporter ZYMOP_RS05445 PF01168 Alanine racemase, N-terminal domain ZYMOP_RS05450 PF01451 Low molecular weight phosphotyrosine protein phosphatase ZYMOP_RS05455 PF03881 Fructosamine kinase ZYMOP_RS05465 PF04073 Aminoacyl-tRNA editing domain ZYMOP_RS05475 PF04185 Phosphoesterase family ZYMOP_RS05475 PF05506 Domain of unknown function (DUF756) ZYMOP_RS05480 PF00004 ATPase family associated with various cellular activities (AAA) ZYMOP_RS05480 PF12002 MgsA AAA+ ATPase C terminal ZYMOP_RS05480 PF16193 AAA C-terminal domain ZYMOP_RS05490 PF01380 SIS domain ZYMOP_RS05505 PF13419 Haloacid dehalogenase-like hydrolase ZYMOP_RS05510 PF12804 MobA-like NTP transferase domain ZYMOP_RS05510 PF00132 Bacterial transferase hexapeptide (six repeats) ZYMOP_RS05525 PF01925 Sulfite exporter TauE/SafE ZYMOP_RS05535 PF00291 Pyridoxal-phosphate dependent enzyme ZYMOP_RS05540 PF07715 TonB-dependent Receptor Plug Domain ZYMOP_RS05540 PF00593 TonB dependent receptor ZYMOP_RS05545 PF00465 Iron-containing alcohol dehydrogenase ZYMOP_RS05550 PF02615 Malate/L-lactate dehydrogenase ZYMOP_RS05555 PF07690 Major Facilitator Superfamily ZYMOP_RS05560 PF06100 MCRA family ZYMOP_RS05570 PF00667 FAD binding domain ZYMOP_RS05570 PF00175 Oxidoreductase NAD-binding domain ZYMOP_RS05570 PF00258 Flavodoxin ZYMOP_RS05575 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ZYMOP_RS05575 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ZYMOP_RS05580 PF01507 Phosphoadenosine phosphosulfate reductase family ZYMOP_RS05585 PF10414 Sirohaem synthase dimerisation region ZYMOP_RS05585 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ZYMOP_RS05590 PF01507 Phosphoadenosine phosphosulfate reductase family ZYMOP_RS05595 PF00009 Elongation factor Tu GTP binding domain ZYMOP_RS05615 PF00171 Aldehyde dehydrogenase family ZYMOP_RS05620 PF01545 Cation efflux family ZYMOP_RS05620 PF16916 Dimerisation domain of Zinc Transporter ZYMOP_RS05625 PF02583 Metal-sensitive transcriptional repressor ZYMOP_RS05650 PF04399 Glutaredoxin 2, C terminal domain ZYMOP_RS05650 PF13417 Glutathione S-transferase, N-terminal domain ZYMOP_RS05665 PF07995 Glucose / Sorbosone dehydrogenase ZYMOP_RS05670 PF03471 Transporter associated domain ZYMOP_RS05670 PF00571 CBS domain ZYMOP_RS05675 PF02130 Uncharacterized protein family UPF0054 ZYMOP_RS05680 PF02562 PhoH-like protein ZYMOP_RS05685 PF04055 Radical SAM superfamily ZYMOP_RS05685 PF01938 TRAM domain ZYMOP_RS05685 PF00919 Uncharacterized protein family UPF0004 ZYMOP_RS05690 PF01584 CheW-like domain ZYMOP_RS05695 PF00072 Response regulator receiver domain ZYMOP_RS05700 PF03975 CheD chemotactic sensory transduction ZYMOP_RS05705 PF01339 CheB methylesterase ZYMOP_RS05705 PF00072 Response regulator receiver domain ZYMOP_RS05710 PF03705 CheR methyltransferase, all-alpha domain ZYMOP_RS05710 PF01739 CheR methyltransferase, SAM binding domain ZYMOP_RS05715 PF01627 Hpt domain ZYMOP_RS05715 PF01584 CheW-like domain ZYMOP_RS05715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ZYMOP_RS05715 PF02895 Signal transducing histidine kinase, homodimeric domain ZYMOP_RS05725 PF00672 HAMP domain ZYMOP_RS05725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ZYMOP_RS05730 PF13291 ACT domain ZYMOP_RS05730 PF04607 Region found in RelA / SpoT proteins ZYMOP_RS05730 PF02824 TGS domain ZYMOP_RS05735 PF00106 short chain dehydrogenase ZYMOP_RS05740 PF00248 Aldo/keto reductase family ZYMOP_RS05755 PF00893 Small Multidrug Resistance protein ZYMOP_RS05765 PF00694 Aconitase C-terminal domain ZYMOP_RS05770 PF00330 Aconitase family (aconitate hydratase) ZYMOP_RS05780 PF07690 Major Facilitator Superfamily ZYMOP_RS05785 PF01066 CDP-alcohol phosphatidyltransferase ZYMOP_RS05790 PF07715 TonB-dependent Receptor Plug Domain ZYMOP_RS05790 PF00593 TonB dependent receptor ZYMOP_RS05800 PF04055 Radical SAM superfamily ZYMOP_RS05800 PF06968 Biotin and Thiamin Synthesis associated domain ZYMOP_RS05810 PF00005 ABC transporter ZYMOP_RS05810 PF16326 ABC transporter C-terminal domain ZYMOP_RS05820 PF00425 chorismate binding enzyme ZYMOP_RS05820 PF04715 Anthranilate synthase component I, N terminal region ZYMOP_RS05825 PF00117 Glutamine amidotransferase class-I ZYMOP_RS05830 PF01063 Amino-transferase class IV ZYMOP_RS05835 PF02082 Transcriptional regulator ZYMOP_RS05840 PF03063 Prismane/CO dehydrogenase family ZYMOP_RS05850 PF06969 HemN C-terminal domain ZYMOP_RS05850 PF04055 Radical SAM superfamily ZYMOP_RS05855 PF01725 Ham1 family ZYMOP_RS05860 PF03725 3' exoribonuclease family, domain 2 ZYMOP_RS05860 PF01138 3' exoribonuclease family, domain 1 ZYMOP_RS05865 PF01628 HrcA protein C terminal domain ZYMOP_RS05870 PF01025 GrpE ZYMOP_RS05875 PF01189 16S rRNA methyltransferase RsmB/F ZYMOP_RS05875 PF01029 NusB family ZYMOP_RS05880 PF00834 Ribulose-phosphate 3 epimerase family ZYMOP_RS05895 PF11870 Domain of unknown function (DUF3390) ZYMOP_RS05895 PF02589 LUD domain ZYMOP_RS05895 PF13183 4Fe-4S dicluster domain ZYMOP_RS05900 PF02754 Cysteine-rich domain ZYMOP_RS05905 PF01808 AICARFT/IMPCHase bienzyme ZYMOP_RS05905 PF02142 MGS-like domain ZYMOP_RS05915 PF07715 TonB-dependent Receptor Plug Domain ZYMOP_RS05915 PF00593 TonB dependent receptor ZYMOP_RS05920 PF03692 Putative zinc- or iron-chelating domain ZYMOP_RS05935 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ZYMOP_RS05940 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ZYMOP_RS05940 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus ZYMOP_RS05945 PF00929 Exonuclease ZYMOP_RS05950 PF01121 Dephospho-CoA kinase ZYMOP_RS05955 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ZYMOP_RS05955 PF08501 Shikimate dehydrogenase substrate binding domain ZYMOP_RS05960 PF02545 Maf-like protein ZYMOP_RS05990 PF01208 Uroporphyrinogen decarboxylase (URO-D) ZYMOP_RS06000 PF07497 Rho termination factor, RNA-binding domain ZYMOP_RS06000 PF07498 Rho termination factor, N-terminal domain ZYMOP_RS06000 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ZYMOP_RS06005 PF00107 Zinc-binding dehydrogenase ZYMOP_RS06005 PF08240 Alcohol dehydrogenase GroES-like domain ZYMOP_RS06010 PF01738 Dienelactone hydrolase family ZYMOP_RS06015 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ZYMOP_RS06015 PF12833 Helix-turn-helix domain ZYMOP_RS06015 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ZYMOP_RS06015 PF02805 Metal binding domain of Ada ZYMOP_RS06020 PF10396 GTP-binding protein TrmE N-terminus ZYMOP_RS06020 PF12631 MnmE helical domain ZYMOP_RS06020 PF01926 50S ribosome-binding GTPase ZYMOP_RS06030 PF01134 Glucose inhibited division protein A ZYMOP_RS06030 PF13932 GidA associated domain ZYMOP_RS06035 PF02527 rRNA small subunit methyltransferase G ZYMOP_RS06040 PF13614 AAA domain ZYMOP_RS06045 PF02195 ParB-like nuclease domain ZYMOP_RS06045 PF17762 HTH domain found in ParB protein ZYMOP_RS06050 PF07690 Major Facilitator Superfamily ZYMOP_RS06070 PF00753 Metallo-beta-lactamase superfamily ZYMOP_RS06070 PF03772 Competence protein ZYMOP_RS06075 PF00749 tRNA synthetases class I (E and Q), catalytic domain ZYMOP_RS06080 PF00285 Citrate synthase, C-terminal domain ZYMOP_RS06085 PF00512 His Kinase A (phospho-acceptor) domain ZYMOP_RS06085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ZYMOP_RS06110 PF00534 Glycosyl transferases group 1 ZYMOP_RS06110 PF13439 Glycosyltransferase Family 4 ZYMOP_RS06115 PF13476 AAA domain ZYMOP_RS06120 PF03949 Malic enzyme, NAD binding domain ZYMOP_RS06120 PF00390 Malic enzyme, N-terminal domain ZYMOP_RS06125 PF00118 TCP-1/cpn60 chaperonin family ZYMOP_RS06130 PF00166 Chaperonin 10 Kd subunit ZYMOP_RS06135 PF01343 Peptidase family S49 ZYMOP_RS06140 PF01136 Peptidase family U32 ZYMOP_RS06150 PF00884 Sulfatase ZYMOP_RS06155 PF05159 Capsule polysaccharide biosynthesis protein ZYMOP_RS06160 PF17764 3′ DNA-binding domain (3′BD) ZYMOP_RS06160 PF00270 DEAD/DEAH box helicase ZYMOP_RS06160 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ZYMOP_RS06160 PF18074 Primosomal protein N C-terminal domain ZYMOP_RS06175 PF00202 Aminotransferase class-III ZYMOP_RS06180 PF00155 Aminotransferase class I and II ZYMOP_RS06190 PF13649 Methyltransferase domain ZYMOP_RS06195 PF00589 Phage integrase family ZYMOP_RS06195 PF02899 Phage integrase, N-terminal SAM-like domain ZYMOP_RS06200 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain ZYMOP_RS06200 PF02951 Prokaryotic glutathione synthetase, N-terminal domain ZYMOP_RS06210 PF06071 Protein of unknown function (DUF933) ZYMOP_RS06210 PF01926 50S ribosome-binding GTPase ZYMOP_RS06215 PF01195 Peptidyl-tRNA hydrolase ZYMOP_RS06220 PF14693 Ribosomal protein TL5, C-terminal domain ZYMOP_RS06220 PF01386 Ribosomal L25p family ZYMOP_RS06235 PF05188 MutS domain II ZYMOP_RS06235 PF05192 MutS domain III ZYMOP_RS06235 PF05190 MutS family domain IV ZYMOP_RS06235 PF00488 MutS domain V ZYMOP_RS06235 PF01624 MutS domain I ZYMOP_RS06240 PF05198 Translation initiation factor IF-3, N-terminal domain ZYMOP_RS06240 PF00707 Translation initiation factor IF-3, C-terminal domain ZYMOP_RS06245 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ZYMOP_RS06245 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ZYMOP_RS06250 PF00814 Glycoprotease family ZYMOP_RS06255 PF03900 Porphobilinogen deaminase, C-terminal domain ZYMOP_RS06255 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ZYMOP_RS06275 PF01783 Ribosomal L32p protein family ZYMOP_RS06280 PF02504 Fatty acid synthesis protein ZYMOP_RS06285 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ZYMOP_RS06285 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ZYMOP_RS06295 PF02699 Preprotein translocase subunit ZYMOP_RS06300 PF07549 SecD/SecF GG Motif ZYMOP_RS06300 PF02355 Protein export membrane protein ZYMOP_RS06305 PF07549 SecD/SecF GG Motif ZYMOP_RS06305 PF02355 Protein export membrane protein ZYMOP_RS06320 PF00291 Pyridoxal-phosphate dependent enzyme ZYMOP_RS06320 PF14821 Threonine synthase N terminus ZYMOP_RS06325 PF00675 Insulinase (Peptidase family M16) ZYMOP_RS06325 PF05193 Peptidase M16 inactive domain ZYMOP_RS06340 PF08241 Methyltransferase domain ZYMOP_RS06345 PF05145 Transition state regulatory protein AbrB ZYMOP_RS06350 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ZYMOP_RS06355 PF02308 MgtC family ZYMOP_RS06360 PF07690 Major Facilitator Superfamily ZYMOP_RS06365 PF00934 PE family ZYMOP_RS06365 PF07859 alpha/beta hydrolase fold ZYMOP_RS06370 PF05145 Transition state regulatory protein AbrB ZYMOP_RS06385 PF00490 Delta-aminolevulinic acid dehydratase ZYMOP_RS06390 PF08264 Anticodon-binding domain of tRNA ZYMOP_RS06390 PF10458 Valyl tRNA synthetase tRNA binding arm ZYMOP_RS06390 PF00133 tRNA synthetases class I (I, L, M and V) ZYMOP_RS06415 PF00462 Glutaredoxin ZYMOP_RS06425 PF02445 Quinolinate synthetase A protein ZYMOP_RS06430 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ZYMOP_RS06430 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ZYMOP_RS06445 PF03309 Type III pantothenate kinase ZYMOP_RS06450 PF17770 Ribonuclease J C-terminal domain ZYMOP_RS06450 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain ZYMOP_RS06450 PF12706 Beta-lactamase superfamily domain ZYMOP_RS06530 PF13533 Biotin-lipoyl like ZYMOP_RS06540 PF03466 LysR substrate binding domain ZYMOP_RS06540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ZYMOP_RS06555 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ZYMOP_RS06555 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ZYMOP_RS06590 PF00258 Flavodoxin ZYMOP_RS06615 PF01032 FecCD transport family ZYMOP_RS06620 PF00005 ABC transporter ZYMOP_RS06625 PF00107 Zinc-binding dehydrogenase ZYMOP_RS06625 PF08240 Alcohol dehydrogenase GroES-like domain ZYMOP_RS06630 PF01638 HxlR-like helix-turn-helix ZYMOP_RS06635 PF08274 PhnA Zinc-Ribbon ZYMOP_RS06635 PF03831 PhnA domain ZYMOP_RS06640 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ZYMOP_RS06640 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ZYMOP_RS06655 PF02508 Rnf-Nqr subunit, membrane protein ZYMOP_RS06660 PF04060 Putative Fe-S cluster ZYMOP_RS06665 PF13375 RnfC Barrel sandwich hybrid domain ZYMOP_RS06665 PF10531 SLBB domain ZYMOP_RS06665 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ZYMOP_RS06665 PF13237 4Fe-4S dicluster domain ZYMOP_RS06670 PF03116 NQR2, RnfD, RnfE family ZYMOP_RS06675 PF04205 FMN-binding domain ZYMOP_RS06680 PF02508 Rnf-Nqr subunit, membrane protein ZYMOP_RS06685 PF03658 RnfH family Ubiquitin ZYMOP_RS06690 PF00005 ABC transporter ZYMOP_RS06690 PF03459 TOBE domain ZYMOP_RS06690 PF10649 Protein of unknown function (DUF2478) ZYMOP_RS06695 PF00528 Binding-protein-dependent transport system inner membrane component ZYMOP_RS06705 PF03459 TOBE domain ZYMOP_RS06710 PF03459 TOBE domain ZYMOP_RS06715 PF04261 Dyp-type peroxidase family ZYMOP_RS06720 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ZYMOP_RS06720 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ZYMOP_RS06730 PF07715 TonB-dependent Receptor Plug Domain ZYMOP_RS06730 PF00593 TonB dependent receptor ZYMOP_RS06735 PF03206 Nitrogen fixation protein NifW ZYMOP_RS06740 PF00682 HMGL-like ZYMOP_RS06745 PF00266 Aminotransferase class-V ZYMOP_RS06750 PF04324 BFD-like [2Fe-2S] binding domain ZYMOP_RS06750 PF01592 NifU-like N terminal domain ZYMOP_RS06750 PF01106 NifU-like domain ZYMOP_RS06755 PF01521 Iron-sulphur cluster biosynthesis ZYMOP_RS06765 PF13237 4Fe-4S dicluster domain ZYMOP_RS06770 PF03270 Protein of unknown function, DUF269 ZYMOP_RS06775 PF02579 Dinitrogenase iron-molybdenum cofactor ZYMOP_RS06780 PF00148 Nitrogenase component 1 type Oxidoreductase ZYMOP_RS06785 PF00148 Nitrogenase component 1 type Oxidoreductase ZYMOP_RS06790 PF11844 Domain of unknown function (DUF3364) ZYMOP_RS06790 PF00148 Nitrogenase component 1 type Oxidoreductase ZYMOP_RS06795 PF00148 Nitrogenase component 1 type Oxidoreductase ZYMOP_RS06800 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family ZYMOP_RS06815 PF06988 NifT/FixU protein ZYMOP_RS06820 PF04319 NifZ domain ZYMOP_RS06825 PF12838 4Fe-4S dicluster domain ZYMOP_RS06830 PF04055 Radical SAM superfamily ZYMOP_RS06830 PF02579 Dinitrogenase iron-molybdenum cofactor ZYMOP_RS06835 PF01590 GAF domain ZYMOP_RS06835 PF02954 Bacterial regulatory protein, Fis family ZYMOP_RS06835 PF00158 Sigma-54 interaction domain ZYMOP_RS06845 PF02508 Rnf-Nqr subunit, membrane protein ZYMOP_RS06850 PF04060 Putative Fe-S cluster ZYMOP_RS06855 PF13375 RnfC Barrel sandwich hybrid domain ZYMOP_RS06855 PF10531 SLBB domain ZYMOP_RS06855 PF13237 4Fe-4S dicluster domain ZYMOP_RS06855 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ZYMOP_RS06860 PF03116 NQR2, RnfD, RnfE family ZYMOP_RS06865 PF04205 FMN-binding domain ZYMOP_RS06870 PF02508 Rnf-Nqr subunit, membrane protein ZYMOP_RS06875 PF03658 RnfH family Ubiquitin ZYMOP_RS06890 PF13419 Haloacid dehalogenase-like hydrolase ZYMOP_RS06895 PF13520 Amino acid permease ZYMOP_RS06900 PF00216 Bacterial DNA-binding protein ZYMOP_RS06910 PF00575 S1 RNA binding domain ZYMOP_RS06915 PF02224 Cytidylate kinase ZYMOP_RS06920 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ZYMOP_RS06940 PF00005 ABC transporter ZYMOP_RS06940 PF00664 ABC transporter transmembrane region ZYMOP_RS06960 PF00924 Mechanosensitive ion channel ZYMOP_RS06990 PF01433 Peptidase family M1 domain ZYMOP_RS07000 PF01638 HxlR-like helix-turn-helix ZYMOP_RS07015 PF00248 Aldo/keto reductase family ZYMOP_RS07020 PF08240 Alcohol dehydrogenase GroES-like domain ZYMOP_RS07020 PF00107 Zinc-binding dehydrogenase ZYMOP_RS07025 PF00465 Iron-containing alcohol dehydrogenase ZYMOP_RS07035 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ZYMOP_RS07040 PF02021 Uncharacterised protein family UPF0102 ZYMOP_RS07050 PF03734 L,D-transpeptidase catalytic domain ZYMOP_RS07050 PF01471 Putative peptidoglycan binding domain ZYMOP_RS07055 PF01544 CorA-like Mg2+ transporter protein ZYMOP_RS07060 PF00483 Nucleotidyl transferase ZYMOP_RS07065 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ZYMOP_RS07065 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ZYMOP_RS07075 PF00206 Lyase ZYMOP_RS07075 PF14698 Argininosuccinate lyase C-terminal ZYMOP_RS07080 PF13525 Outer membrane lipoprotein ZYMOP_RS07090 PF02447 GntP family permease ZYMOP_RS07095 PF00303 Thymidylate synthase ZYMOP_RS07100 PF00171 Aldehyde dehydrogenase family ZYMOP_RS07105 PF00175 Oxidoreductase NAD-binding domain ZYMOP_RS07105 PF00970 Oxidoreductase FAD-binding domain ZYMOP_RS07120 PF04333 MlaA lipoprotein ZYMOP_RS07125 PF01209 ubiE/COQ5 methyltransferase family ZYMOP_RS07130 PF02219 Methylenetetrahydrofolate reductase ZYMOP_RS07135 PF02607 B12 binding domain ZYMOP_RS07135 PF02574 Homocysteine S-methyltransferase ZYMOP_RS07135 PF02965 Vitamin B12 dependent methionine synthase, activation domain ZYMOP_RS07135 PF00809 Pterin binding enzyme ZYMOP_RS07135 PF02310 B12 binding domain ZYMOP_RS07140 PF02574 Homocysteine S-methyltransferase ZYMOP_RS07140 PF00809 Pterin binding enzyme ZYMOP_RS07140 PF02310 B12 binding domain ZYMOP_RS07140 PF02607 B12 binding domain ZYMOP_RS07140 PF02965 Vitamin B12 dependent methionine synthase, activation domain ZYMOP_RS07150 PF00679 Elongation factor G C-terminus ZYMOP_RS07150 PF00009 Elongation factor Tu GTP binding domain ZYMOP_RS07150 PF03144 Elongation factor Tu domain 2 ZYMOP_RS07150 PF06421 GTP-binding protein LepA C-terminus ZYMOP_RS07160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ZYMOP_RS07160 PF06580 Histidine kinase ZYMOP_RS07160 PF07694 5TMR of 5TMR-LYT ZYMOP_RS07165 PF04397 LytTr DNA-binding domain ZYMOP_RS07165 PF00072 Response regulator receiver domain ZYMOP_RS07190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ZYMOP_RS07190 PF03466 LysR substrate binding domain ZYMOP_RS07195 PF00578 AhpC/TSA family ZYMOP_RS07200 PF00132 Bacterial transferase hexapeptide (six repeats) ZYMOP_RS07215 PF00155 Aminotransferase class I and II ZYMOP_RS07220 PF02617 ATP-dependent Clp protease adaptor protein ClpS ZYMOP_RS07225 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ZYMOP_RS07235 PF02578 Multi-copper polyphenol oxidoreductase laccase ZYMOP_RS07240 PF00107 Zinc-binding dehydrogenase ZYMOP_RS07240 PF08240 Alcohol dehydrogenase GroES-like domain ZYMOP_RS07250 PF01192 RNA polymerase Rpb6 ZYMOP_RS07255 PF00480 ROK family ZYMOP_RS07270 PF01618 MotA/TolQ/ExbB proton channel family ZYMOP_RS07275 PF02472 Biopolymer transport protein ExbD/TolR ZYMOP_RS07280 PF02472 Biopolymer transport protein ExbD/TolR ZYMOP_RS07285 PF01165 Ribosomal protein S21 ZYMOP_RS07290 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ZYMOP_RS07290 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ZYMOP_RS07295 PF01594 AI-2E family transporter ZYMOP_RS07300 PF10502 Signal peptidase, peptidase S26 ZYMOP_RS07305 PF01648 4'-phosphopantetheinyl transferase superfamily ZYMOP_RS07310 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ZYMOP_RS07315 PF00156 Phosphoribosyl transferase domain ZYMOP_RS07330 PF01494 FAD binding domain ZYMOP_RS07345 PF02595 Glycerate kinase family ZYMOP_RS07350 PF13491 4TM region of DNA translocase FtsK/SpoIIIE ZYMOP_RS07350 PF17854 FtsK alpha domain ZYMOP_RS07350 PF01580 FtsK/SpoIIIE family ZYMOP_RS07350 PF09397 Ftsk gamma domain ZYMOP_RS07365 PF03372 Endonuclease/Exonuclease/phosphatase family ZYMOP_RS07370 PF00925 GTP cyclohydrolase II ZYMOP_RS07370 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ZYMOP_RS07385 PF01264 Chorismate synthase ZYMOP_RS07395 PF03631 Virulence factor BrkB ZYMOP_RS07400 PF00684 DnaJ central domain ZYMOP_RS07400 PF01556 DnaJ C terminal domain ZYMOP_RS07400 PF00226 DnaJ domain ZYMOP_RS07410 PF01979 Amidohydrolase family ZYMOP_RS07415 PF01571 Aminomethyltransferase folate-binding domain ZYMOP_RS07420 PF00709 Adenylosuccinate synthetase ZYMOP_RS07425 PF13393 Histidyl-tRNA synthetase ZYMOP_RS07430 PF01842 ACT domain ZYMOP_RS07430 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ZYMOP_RS07430 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ZYMOP_RS07460 PF00800 Prephenate dehydratase ZYMOP_RS07460 PF01842 ACT domain ZYMOP_RS07465 PF00730 HhH-GPD superfamily base excision DNA repair protein ZYMOP_RS07465 PF14815 NUDIX domain ZYMOP_RS07465 PF00633 Helix-hairpin-helix motif ZYMOP_RS07485 PF00248 Aldo/keto reductase family ZYMOP_RS07505 PF03232 Ubiquinone biosynthesis protein COQ7 ZYMOP_RS07515 PF03572 Peptidase family S41 ZYMOP_RS07515 PF13180 PDZ domain ZYMOP_RS07525 PF02590 Predicted SPOUT methyltransferase ZYMOP_RS07535 PF01467 Cytidylyltransferase-like ZYMOP_RS07540 PF00171 Aldehyde dehydrogenase family ZYMOP_RS07550 PF17862 AAA+ lid domain ZYMOP_RS07550 PF01434 Peptidase family M41 ZYMOP_RS07550 PF00004 ATPase family associated with various cellular activities (AAA) ZYMOP_RS07555 PF01171 PP-loop family ZYMOP_RS07580 PF00696 Amino acid kinase family ZYMOP_RS07580 PF01842 ACT domain ZYMOP_RS07580 PF13840 ACT domain ZYMOP_RS07585 PF03060 Nitronate monooxygenase ZYMOP_RS07590 PF05524 PEP-utilising enzyme, N-terminal ZYMOP_RS07590 PF00391 PEP-utilising enzyme, mobile domain ZYMOP_RS07590 PF02896 PEP-utilising enzyme, TIM barrel domain ZYMOP_RS07595 PF00144 Beta-lactamase ZYMOP_RS07600 PF08450 SMP-30/Gluconolactonase/LRE-like region ZYMOP_RS07605 PF03167 Uracil DNA glycosylase superfamily ZYMOP_RS07610 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ZYMOP_RS07620 PF00271 Helicase conserved C-terminal domain ZYMOP_RS07620 PF17757 UvrB interaction domain ZYMOP_RS07620 PF03461 TRCF domain ZYMOP_RS07620 PF00270 DEAD/DEAH box helicase ZYMOP_RS07620 PF02559 CarD-like/TRCF domain ZYMOP_RS07625 PF00270 DEAD/DEAH box helicase ZYMOP_RS07625 PF00271 Helicase conserved C-terminal domain ZYMOP_RS07625 PF17191 RecG wedge domain ZYMOP_RS07630 PF00579 tRNA synthetases class I (W and Y) ZYMOP_RS07635 PF03702 Anhydro-N-acetylmuramic acid kinase ZYMOP_RS07650 PF06725 3D domain ZYMOP_RS07650 PF03562 MltA specific insert domain ZYMOP_RS07660 PF02556 Preprotein translocase subunit SecB ZYMOP_RS07665 PF03023 Lipid II flippase MurJ ZYMOP_RS07670 PF00579 tRNA synthetases class I (W and Y) ZYMOP_RS07680 PF07687 Peptidase dimerisation domain ZYMOP_RS07680 PF01546 Peptidase family M20/M25/M40 ZYMOP_RS07685 PF02694 Uncharacterised BCR, YnfA/UPF0060 family ZYMOP_RS07690 PF01926 50S ribosome-binding GTPase ZYMOP_RS07695 PF14849 YidC periplasmic domain ZYMOP_RS07695 PF02096 60Kd inner membrane protein ZYMOP_RS07700 PF01809 Putative membrane protein insertion efficiency factor ZYMOP_RS07705 PF00825 Ribonuclease P ZYMOP_RS07710 PF01078 Magnesium chelatase, subunit ChlI ZYMOP_RS07710 PF13335 Magnesium chelatase, subunit ChlI C-terminal ZYMOP_RS07715 PF01980 tRNA-methyltransferase O ZYMOP_RS07715 PF18389 TrmO C-terminal domain ZYMOP_RS07720 PF03979 Sigma-70 factor, region 1.1 ZYMOP_RS07720 PF00140 Sigma-70 factor, region 1.2 ZYMOP_RS07720 PF04545 Sigma-70, region 4 ZYMOP_RS07720 PF04539 Sigma-70 region 3 ZYMOP_RS07720 PF04542 Sigma-70 region 2 ZYMOP_RS07720 PF04546 Sigma-70, non-essential region ZYMOP_RS07725 PF08278 DNA primase DnaG DnaB-binding ZYMOP_RS07725 PF08275 DNA primase catalytic core, N-terminal domain ZYMOP_RS07725 PF01807 CHC2 zinc finger ZYMOP_RS07725 PF10410 DnaB-helicase binding domain of primase ZYMOP_RS07740 PF00117 Glutamine amidotransferase class-I ZYMOP_RS07740 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ZYMOP_RS07745 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ZYMOP_RS07745 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ZYMOP_RS07745 PF02142 MGS-like domain ZYMOP_RS07750 PF03449 Transcription elongation factor, N-terminal ZYMOP_RS07750 PF01272 Transcription elongation factor, GreA/GreB, C-term ZYMOP_RS07780 PF03952 Enolase, N-terminal domain ZYMOP_RS07780 PF00113 Enolase, C-terminal TIM barrel domain ZYMOP_RS07790 PF05726 Pirin C-terminal cupin domain ZYMOP_RS07790 PF02678 Pirin ZYMOP_RS07795 PF03466 LysR substrate binding domain ZYMOP_RS07795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ZYMOP_RS07800 PF00676 Dehydrogenase E1 component ZYMOP_RS07805 PF02780 Transketolase, C-terminal domain ZYMOP_RS07805 PF02779 Transketolase, pyrimidine binding domain ZYMOP_RS07805 PF00364 Biotin-requiring enzyme ZYMOP_RS07815 PF04273 Putative phosphatase (DUF442) ZYMOP_RS07815 PF00753 Metallo-beta-lactamase superfamily ZYMOP_RS07820 PF00857 Isochorismatase family ZYMOP_RS07825 PF00075 RNase H ZYMOP_RS07830 PF01636 Phosphotransferase enzyme family ZYMOP_RS07840 PF02780 Transketolase, C-terminal domain ZYMOP_RS07840 PF02779 Transketolase, pyrimidine binding domain ZYMOP_RS07840 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ZYMOP_RS07845 PF00465 Iron-containing alcohol dehydrogenase ZYMOP_RS07855 PF00842 Alanine racemase, C-terminal domain ZYMOP_RS07855 PF01168 Alanine racemase, N-terminal domain ZYMOP_RS07860 PF02405 Permease MlaE ZYMOP_RS07865 PF00005 ABC transporter ZYMOP_RS07870 PF17760 UvrA interaction domain ZYMOP_RS07870 PF17755 UvrA DNA-binding domain ZYMOP_RS07880 PF00210 Ferritin-like domain ZYMOP_RS07885 PF02463 RecF/RecN/SMC N terminal domain ZYMOP_RS07890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ZYMOP_RS07890 PF00986 DNA gyrase B subunit, carboxyl terminus ZYMOP_RS07890 PF01751 Toprim domain ZYMOP_RS07890 PF00204 DNA gyrase B ZYMOP_RS07905 PF00248 Aldo/keto reductase family ZYMOP_RS07970 PF07690 Major Facilitator Superfamily ZYMOP_RS07975 PF00106 short chain dehydrogenase ZYMOP_RS07980 PF00440 Bacterial regulatory proteins, tetR family ZYMOP_RS07990 PF00005 ABC transporter ZYMOP_RS07995 PF00950 ABC 3 transport family ZYMOP_RS08000 PF01297 Zinc-uptake complex component A periplasmic ZYMOP_RS08010 PF02322 Cytochrome bd terminal oxidase subunit II ZYMOP_RS08015 PF01654 Cytochrome bd terminal oxidase subunit I ZYMOP_RS08020 PF02901 Pyruvate formate lyase-like ZYMOP_RS08020 PF01228 Glycine radical ZYMOP_RS08025 PF04055 Radical SAM superfamily ZYMOP_RS08055 PF00293 NUDIX domain ZYMOP_RS08060 PF00106 short chain dehydrogenase ZYMOP_RS08065 PF13537 Glutamine amidotransferase domain ZYMOP_RS08065 PF00156 Phosphoribosyl transferase domain ZYMOP_RS08070 PF04107 Glutamate-cysteine ligase family 2(GCS2) ZYMOP_RS08075 PF04452 RNA methyltransferase ZYMOP_RS08080 PF02769 AIR synthase related protein, C-terminal domain ZYMOP_RS08080 PF00586 AIR synthase related protein, N-terminal domain ZYMOP_RS08085 PF01029 NusB family ZYMOP_RS08090 PF00815 Histidinol dehydrogenase ZYMOP_RS08095 PF01634 ATP phosphoribosyltransferase ZYMOP_RS08105 PF00226 DnaJ domain ZYMOP_RS08110 PF07728 AAA domain (dynein-related subfamily) ZYMOP_RS08110 PF12556 Cobaltochelatase CobS subunit N terminal ZYMOP_RS08110 PF08406 CbbQ/NirQ/NorQ C-terminal ZYMOP_RS08115 PF11775 Cobalamin biosynthesis protein CobT VWA domain ZYMOP_RS08115 PF06213 Cobalamin biosynthesis protein CobT ZYMOP_RS08120 PF00436 Single-strand binding protein family ZYMOP_RS08125 PF07664 Ferrous iron transport protein B C terminus ZYMOP_RS08125 PF02421 Ferrous iron transport protein B ZYMOP_RS08125 PF07670 Nucleoside recognition ZYMOP_RS08135 PF07733 Bacterial DNA polymerase III alpha NTPase domain ZYMOP_RS08135 PF14579 Helix-hairpin-helix motif ZYMOP_RS08135 PF02811 PHP domain ZYMOP_RS08135 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ZYMOP_RS08150 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase ZYMOP_RS08155 PF00571 CBS domain ZYMOP_RS08155 PF01380 SIS domain ZYMOP_RS08160 PF13533 Biotin-lipoyl like ZYMOP_RS08165 PF00873 AcrB/AcrD/AcrF family ZYMOP_RS08170 PF00873 AcrB/AcrD/AcrF family ZYMOP_RS08175 PF02321 Outer membrane efflux protein ZYMOP_RS08185 PF07715 TonB-dependent Receptor Plug Domain ZYMOP_RS08185 PF00593 TonB dependent receptor ZYMOP_RS08200 PF14572 Phosphoribosyl synthetase-associated domain ZYMOP_RS08200 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ZYMOP_RS08205 PF00459 Inositol monophosphatase family ZYMOP_RS08210 PF01632 Ribosomal protein L35 ZYMOP_RS08215 PF00453 Ribosomal protein L20 ZYMOP_RS08220 PF01409 tRNA synthetases class II core domain (F) ZYMOP_RS08220 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ZYMOP_RS08225 PF03484 tRNA synthetase B5 domain ZYMOP_RS08225 PF03147 Ferredoxin-fold anticodon binding domain ZYMOP_RS08225 PF01588 Putative tRNA binding domain ZYMOP_RS08225 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ZYMOP_RS08225 PF03483 B3/4 domain ZYMOP_RS08230 PF00664 ABC transporter transmembrane region ZYMOP_RS08230 PF00005 ABC transporter ZYMOP_RS08240 PF05175 Methyltransferase small domain ZYMOP_RS08240 PF17827 PrmC N-terminal domain ZYMOP_RS08245 PF03462 PCRF domain ZYMOP_RS08245 PF00472 RF-1 domain ZYMOP_RS08250 PF13393 Histidyl-tRNA synthetase ZYMOP_RS08255 PF00719 Inorganic pyrophosphatase ZYMOP_RS08270 PF00475 Imidazoleglycerol-phosphate dehydratase ZYMOP_RS08275 PF00117 Glutamine amidotransferase class-I ZYMOP_RS08280 PF00977 Histidine biosynthesis protein ZYMOP_RS08285 PF00977 Histidine biosynthesis protein ZYMOP_RS08290 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase ZYMOP_RS08295 PF01230 HIT domain ZYMOP_RS08300 PF13520 Amino acid permease ZYMOP_RS08305 PF00311 Phosphoenolpyruvate carboxylase ZYMOP_RS08315 PF01923 Cobalamin adenosyltransferase ZYMOP_RS08320 PF00696 Amino acid kinase family ZYMOP_RS08345 PF02348 Cytidylyltransferase ZYMOP_RS08350 PF00793 DAHP synthetase I family ZYMOP_RS08365 PF13361 UvrD-like helicase C-terminal domain ZYMOP_RS08365 PF00580 UvrD/REP helicase N-terminal domain ZYMOP_RS08370 PF00549 CoA-ligase ZYMOP_RS08370 PF08442 ATP-grasp domain ZYMOP_RS08375 PF01012 Electron transfer flavoprotein domain ZYMOP_RS08380 PF00766 Electron transfer flavoprotein FAD-binding domain ZYMOP_RS08380 PF01012 Electron transfer flavoprotein domain ZYMOP_RS08385 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase ZYMOP_RS08400 PF00392 Bacterial regulatory proteins, gntR family ZYMOP_RS08400 PF00155 Aminotransferase class I and II ZYMOP_RS08415 PF00009 Elongation factor Tu GTP binding domain ZYMOP_RS08415 PF03144 Elongation factor Tu domain 2 ZYMOP_RS08415 PF00679 Elongation factor G C-terminus ZYMOP_RS08425 PF01232 Mannitol dehydrogenase Rossmann domain ZYMOP_RS08425 PF08125 Mannitol dehydrogenase C-terminal domain ZYMOP_RS08450 PF02091 Glycyl-tRNA synthetase alpha subunit ZYMOP_RS08455 PF05746 DALR anticodon binding domain ZYMOP_RS08455 PF02092 Glycyl-tRNA synthetase beta subunit ZYMOP_RS08460 PF01266 FAD dependent oxidoreductase ZYMOP_RS08470 PF00795 Carbon-nitrogen hydrolase ZYMOP_RS08475 PF12100 Domain of unknown function (DUF3576) ZYMOP_RS08480 PF08264 Anticodon-binding domain of tRNA ZYMOP_RS08480 PF00133 tRNA synthetases class I (I, L, M and V) ZYMOP_RS08480 PF13603 Leucyl-tRNA synthetase, Domain 2 ZYMOP_RS08505 PF13533 Biotin-lipoyl like ZYMOP_RS08515 PF04002 RadC-like JAB domain ZYMOP_RS08525 PF10431 C-terminal, D2-small domain, of ClpB protein ZYMOP_RS08525 PF02861 Clp amino terminal domain, pathogenicity island component ZYMOP_RS08525 PF17871 AAA lid domain ZYMOP_RS08525 PF00004 ATPase family associated with various cellular activities (AAA) ZYMOP_RS08525 PF07724 AAA domain (Cdc48 subfamily) ZYMOP_RS08530 PF00675 Insulinase (Peptidase family M16) ZYMOP_RS08530 PF05193 Peptidase M16 inactive domain ZYMOP_RS08535 PF05193 Peptidase M16 inactive domain ZYMOP_RS08535 PF00675 Insulinase (Peptidase family M16) ZYMOP_RS08540 PF02222 ATP-grasp domain ZYMOP_RS08540 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ZYMOP_RS08545 PF00731 AIR carboxylase ZYMOP_RS08550 PF01040 UbiA prenyltransferase family ZYMOP_RS08555 PF00271 Helicase conserved C-terminal domain ZYMOP_RS08555 PF00270 DEAD/DEAH box helicase ZYMOP_RS08565 PF00814 Glycoprotease family ZYMOP_RS08575 PF05443 ROS/MUCR transcriptional regulator protein ZYMOP_RS08580 PF01475 Ferric uptake regulator family ZYMOP_RS08585 PF00210 Ferritin-like domain ZYMOP_RS08600 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region ZYMOP_RS08600 PF00326 Prolyl oligopeptidase family ZYMOP_RS08605 PF02774 Semialdehyde dehydrogenase, dimerisation domain ZYMOP_RS08605 PF01118 Semialdehyde dehydrogenase, NAD binding domain ZYMOP_RS08610 PF00561 alpha/beta hydrolase fold ZYMOP_RS08615 PF00072 Response regulator receiver domain ZYMOP_RS08620 PF04542 Sigma-70 region 2 ZYMOP_RS08620 PF08281 Sigma-70, region 4 ZYMOP_RS08625 PF01551 Peptidase family M23 ZYMOP_RS08625 PF08525 Opacity-associated protein A N-terminal motif ZYMOP_RS08625 PF01476 LysM domain ZYMOP_RS08630 PF01521 Iron-sulphur cluster biosynthesis ZYMOP_RS08635 PF03372 Endonuclease/Exonuclease/phosphatase family ZYMOP_RS08690 PF11412 Disulphide bond corrector protein DsbC ZYMOP_RS08690 PF02683 Cytochrome C biogenesis protein transmembrane region ZYMOP_RS08700 PF00072 Response regulator receiver domain ZYMOP_RS08700 PF00486 Transcriptional regulatory protein, C terminal ZYMOP_RS08715 PF01926 50S ribosome-binding GTPase ZYMOP_RS08715 PF07650 KH domain ZYMOP_RS08720 PF00202 Aminotransferase class-III ZYMOP_RS08750 PF00035 Double-stranded RNA binding motif ZYMOP_RS08750 PF14622 Ribonuclease-III-like ZYMOP_RS08765 PF16363 GDP-mannose 4,6 dehydratase ZYMOP_RS08770 PF16363 GDP-mannose 4,6 dehydratase ZYMOP_RS08785 PF04371 Porphyromonas-type peptidyl-arginine deiminase ZYMOP_RS08790 PF01479 S4 domain ZYMOP_RS08790 PF00163 Ribosomal protein S4/S9 N-terminal domain ZYMOP_RS08795 PF00990 Diguanylate cyclase, GGDEF domain ZYMOP_RS08800 PF04055 Radical SAM superfamily ZYMOP_RS08810 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ZYMOP_RS08810 PF00205 Thiamine pyrophosphate enzyme, central domain ZYMOP_RS08810 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ZYMOP_RS09085 PF01513 ATP-NAD kinase ZYMOP_RS09200 PF01053 Cys/Met metabolism PLP-dependent enzyme ZYMOP_RS09235 PF00251 Glycosyl hydrolases family 32 N-terminal domain ZYMOP_RS09235 PF08244 Glycosyl hydrolases family 32 C terminal