locus-tag class description HDN1F_RS00005 PF11638 DnaA N-terminal domain HDN1F_RS00005 PF00308 Bacterial dnaA protein HDN1F_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix HDN1F_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain HDN1F_RS00010 PF02767 DNA polymerase III beta subunit, central domain HDN1F_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain HDN1F_RS00015 PF02463 RecF/RecN/SMC N terminal domain HDN1F_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus HDN1F_RS00020 PF00204 DNA gyrase B HDN1F_RS00020 PF01751 Toprim domain HDN1F_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_RS00020 PF18053 DNA gyrase B subunit insert domain HDN1F_RS00030 PF05746 DALR anticodon binding domain HDN1F_RS00030 PF02092 Glycyl-tRNA synthetase beta subunit HDN1F_RS00035 PF02091 Glycyl-tRNA synthetase alpha subunit HDN1F_RS00060 PF02682 Carboxyltransferase domain, subdomain C and D HDN1F_RS00065 PF02626 Carboxyltransferase domain, subdomain A and B HDN1F_RS00070 PF03746 LamB/YcsF family HDN1F_RS00110 PF05368 NmrA-like family HDN1F_RS00115 PF01569 PAP2 superfamily HDN1F_RS00125 PF02698 DUF218 domain HDN1F_RS00135 PF00106 short chain dehydrogenase HDN1F_RS00140 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB HDN1F_RS00145 PF01381 Helix-turn-helix HDN1F_RS00165 PF13411 MerR HTH family regulatory protein HDN1F_RS00170 PF01118 Semialdehyde dehydrogenase, NAD binding domain HDN1F_RS00190 PF01131 DNA topoisomerase HDN1F_RS00190 PF01751 Toprim domain HDN1F_RS00200 PF05736 OprF membrane domain HDN1F_RS00200 PF00691 OmpA family HDN1F_RS00205 PF00144 Beta-lactamase HDN1F_RS00210 PF00072 Response regulator receiver domain HDN1F_RS00210 PF00486 Transcriptional regulatory protein, C terminal HDN1F_RS00225 PF13533 Biotin-lipoyl like HDN1F_RS00230 PF00873 AcrB/AcrD/AcrF family HDN1F_RS00240 PF00672 HAMP domain HDN1F_RS00240 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_RS00240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_RS00265 PF00108 Thiolase, N-terminal domain HDN1F_RS00265 PF02803 Thiolase, C-terminal domain HDN1F_RS00280 PF02481 DNA recombination-mediator protein A HDN1F_RS00280 PF17782 DprA winged helix domain HDN1F_RS00295 PF00563 EAL domain HDN1F_RS00295 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_RS00295 PF03707 Bacterial signalling protein N terminal repeat HDN1F_RS00300 PF03707 Bacterial signalling protein N terminal repeat HDN1F_RS00300 PF00563 EAL domain HDN1F_RS00300 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_RS00320 PF01432 Peptidase family M3 HDN1F_RS00325 PF18317 Shikimate 5'-dehydrogenase C-terminal domain HDN1F_RS00325 PF01488 Shikimate / quinate 5-dehydrogenase HDN1F_RS00325 PF08501 Shikimate dehydrogenase substrate binding domain HDN1F_RS00330 PF01218 Coproporphyrinogen III oxidase HDN1F_RS00335 PF01300 Telomere recombination HDN1F_RS00340 PF00731 AIR carboxylase HDN1F_RS00350 PF00682 HMGL-like HDN1F_RS00355 PF00698 Acyl transferase domain HDN1F_RS00355 PF08240 Alcohol dehydrogenase GroES-like domain HDN1F_RS00355 PF08990 Erythronolide synthase docking HDN1F_RS00355 PF16197 Ketoacyl-synthetase C-terminal extension HDN1F_RS00355 PF00109 Beta-ketoacyl synthase, N-terminal domain HDN1F_RS00355 PF02801 Beta-ketoacyl synthase, C-terminal domain HDN1F_RS00355 PF08659 KR domain HDN1F_RS00355 PF00550 Phosphopantetheine attachment site HDN1F_RS00355 PF14765 Polyketide synthase dehydratase HDN1F_RS00360 PF01594 AI-2E family transporter HDN1F_RS00365 PF00571 CBS domain HDN1F_RS00370 PF00672 HAMP domain HDN1F_RS00370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HDN1F_RS00420 PF01464 Transglycosylase SLT domain HDN1F_RS00425 PF13193 AMP-binding enzyme C-terminal domain HDN1F_RS00425 PF00668 Condensation domain HDN1F_RS00425 PF00501 AMP-binding enzyme HDN1F_RS00425 PF00550 Phosphopantetheine attachment site HDN1F_RS00430 PF00550 Phosphopantetheine attachment site HDN1F_RS00430 PF00501 AMP-binding enzyme HDN1F_RS00430 PF13193 AMP-binding enzyme C-terminal domain HDN1F_RS00430 PF00668 Condensation domain HDN1F_RS00430 PF00975 Thioesterase domain HDN1F_RS00440 PF08448 PAS fold HDN1F_RS00440 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_RS00440 PF00563 EAL domain HDN1F_RS00445 PF04405 Domain of Unknown function (DUF542) HDN1F_RS00445 PF01814 Hemerythrin HHE cation binding domain HDN1F_RS00455 PF00072 Response regulator receiver domain HDN1F_RS00455 PF00672 HAMP domain HDN1F_RS00455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_RS00455 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_RS00455 PF01627 Hpt domain HDN1F_RS00455 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HDN1F_RS00475 PF00072 Response regulator receiver domain HDN1F_RS00475 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HDN1F_RS00475 PF01627 Hpt domain HDN1F_RS00475 PF00672 HAMP domain HDN1F_RS00475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_RS00475 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_RS00480 PF01734 Patatin-like phospholipase HDN1F_RS00480 PF00027 Cyclic nucleotide-binding domain HDN1F_RS00490 PF02899 Phage integrase, N-terminal SAM-like domain HDN1F_RS00490 PF00589 Phage integrase family HDN1F_RS00500 PF01678 Diaminopimelate epimerase HDN1F_RS00505 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HDN1F_RS00505 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HDN1F_RS00515 PF01295 Adenylate cyclase, class-I HDN1F_RS00515 PF12633 Adenylate cyclase NT domain HDN1F_RS00520 PF13426 PAS domain HDN1F_RS00520 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_RS00520 PF00563 EAL domain HDN1F_RS00525 PF14698 Argininosuccinate lyase C-terminal HDN1F_RS00525 PF00206 Lyase HDN1F_RS00530 PF07694 5TMR of 5TMR-LYT HDN1F_RS00530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_RS00530 PF06580 Histidine kinase HDN1F_RS00535 PF05853 beta-keto acid cleavage enzyme HDN1F_RS00540 PF04397 LytTr DNA-binding domain HDN1F_RS00540 PF00072 Response regulator receiver domain HDN1F_RS00545 PF03900 Porphobilinogen deaminase, C-terminal domain HDN1F_RS00545 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain HDN1F_RS00550 PF02602 Uroporphyrinogen-III synthase HemD HDN1F_RS00565 PF07498 Rho termination factor, N-terminal domain HDN1F_RS00565 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HDN1F_RS00565 PF07497 Rho termination factor, RNA-binding domain HDN1F_RS00575 PF00085 Thioredoxin HDN1F_RS00580 PF02541 Ppx/GppA phosphatase family HDN1F_RS00585 PF00884 Sulfatase HDN1F_RS00595 PF00005 ABC transporter HDN1F_RS00620 PF00535 Glycosyl transferase family 2 HDN1F_RS00640 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) HDN1F_RS00645 PF00291 Pyridoxal-phosphate dependent enzyme HDN1F_RS00645 PF00585 C-terminal regulatory domain of Threonine dehydratase HDN1F_RS00650 PF01812 5-formyltetrahydrofolate cyclo-ligase family HDN1F_RS00655 PF05164 Cell division protein ZapA HDN1F_RS00670 PF05195 Aminopeptidase P, N-terminal domain HDN1F_RS00670 PF00557 Metallopeptidase family M24 HDN1F_RS00675 PF01571 Aminomethyltransferase folate-binding domain HDN1F_RS00675 PF08669 Glycine cleavage T-protein C-terminal barrel domain HDN1F_RS00680 PF01597 Glycine cleavage H-protein HDN1F_RS00685 PF02347 Glycine cleavage system P-protein HDN1F_RS00690 PF02347 Glycine cleavage system P-protein HDN1F_RS00705 PF09371 Tex-like protein N-terminal domain HDN1F_RS00705 PF16921 Tex protein YqgF-like domain HDN1F_RS00705 PF17674 HHH domain HDN1F_RS00705 PF00575 S1 RNA binding domain HDN1F_RS00715 PF00072 Response regulator receiver domain HDN1F_RS00715 PF00486 Transcriptional regulatory protein, C terminal HDN1F_RS00720 PF00672 HAMP domain HDN1F_RS00720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_RS00720 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_RS00735 PF00293 NUDIX domain HDN1F_RS00740 PF00391 PEP-utilising enzyme, mobile domain HDN1F_RS00740 PF01590 GAF domain HDN1F_RS00740 PF02896 PEP-utilising enzyme, TIM barrel domain HDN1F_RS00740 PF05524 PEP-utilising enzyme, N-terminal HDN1F_RS00750 PF01790 Prolipoprotein diacylglyceryl transferase HDN1F_RS00755 PF00303 Thymidylate synthase HDN1F_RS00760 PF00186 Dihydrofolate reductase HDN1F_RS00770 PF00924 Mechanosensitive ion channel HDN1F_RS00770 PF12795 Mechanosensitive ion channel porin domain HDN1F_RS00770 PF12794 Mechanosensitive ion channel inner membrane domain 1 HDN1F_RS00775 PF04102 SlyX HDN1F_RS00805 PF00920 Dehydratase family HDN1F_RS00825 PF03466 LysR substrate binding domain HDN1F_RS00825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HDN1F_RS00830 PF02678 Pirin HDN1F_RS00830 PF05726 Pirin C-terminal cupin domain HDN1F_RS00840 PF09308 LuxQ, periplasmic HDN1F_RS00840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_RS00840 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_RS00840 PF00072 Response regulator receiver domain HDN1F_RS00845 PF00072 Response regulator receiver domain HDN1F_RS00865 PF00625 Guanylate kinase HDN1F_RS00870 PF00571 CBS domain HDN1F_RS00870 PF03471 Transporter associated domain HDN1F_RS00870 PF01595 Cyclin M transmembrane N-terminal domain HDN1F_RS00875 PF07690 Major Facilitator Superfamily HDN1F_RS00880 PF13452 N-terminal half of MaoC dehydratase HDN1F_RS00905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HDN1F_RS00905 PF00672 HAMP domain HDN1F_RS00910 PF06969 HemN C-terminal domain HDN1F_RS00910 PF04055 Radical SAM superfamily HDN1F_RS00915 PF01725 Ham1 family HDN1F_RS00925 PF07021 Methionine biosynthesis protein MetW HDN1F_RS00925 PF00561 alpha/beta hydrolase fold HDN1F_RS00930 PF00561 alpha/beta hydrolase fold HDN1F_RS00940 PF00072 Response regulator receiver domain HDN1F_RS00950 PF01584 CheW-like domain HDN1F_RS00950 PF07194 P2 response regulator binding domain HDN1F_RS00950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_RS00950 PF01627 Hpt domain HDN1F_RS00950 PF02895 Signal transducing histidine kinase, homodimeric domain HDN1F_RS00955 PF01584 CheW-like domain HDN1F_RS00960 PF03975 CheD chemotactic sensory transduction HDN1F_RS00965 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_RS00965 PF00563 EAL domain HDN1F_RS00965 PF03707 Bacterial signalling protein N terminal repeat HDN1F_RS00970 PF03109 ABC1 family HDN1F_RS00975 PF00950 ABC 3 transport family HDN1F_RS00980 PF00005 ABC transporter HDN1F_RS00990 PF01636 Phosphotransferase enzyme family HDN1F_RS01010 PF04357 TamB, inner membrane protein subunit of TAM complex HDN1F_RS01015 PF17243 POTRA domain TamA domain 1 HDN1F_RS01015 PF07244 Surface antigen variable number repeat HDN1F_RS01015 PF01103 Surface antigen HDN1F_RS01025 PF13808 DDE_Tnp_1-associated HDN1F_RS01025 PF01609 Transposase DDE domain HDN1F_RS01065 PF07859 alpha/beta hydrolase fold HDN1F_RS01070 PF00282 Pyridoxal-dependent decarboxylase conserved domain HDN1F_RS01080 PF00476 DNA polymerase family A HDN1F_RS01080 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HDN1F_RS01080 PF01367 5'-3' exonuclease, C-terminal SAM fold HDN1F_RS01080 PF01612 3'-5' exonuclease HDN1F_RS01115 PF07690 Major Facilitator Superfamily HDN1F_RS01125 PF13335 Magnesium chelatase, subunit ChlI C-terminal HDN1F_RS01125 PF01078 Magnesium chelatase, subunit ChlI HDN1F_RS01130 PF08240 Alcohol dehydrogenase GroES-like domain HDN1F_RS01130 PF00107 Zinc-binding dehydrogenase HDN1F_RS01140 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system HDN1F_RS01155 PF08003 Protein of unknown function (DUF1698) HDN1F_RS01160 PF03435 Saccharopine dehydrogenase NADP binding domain HDN1F_RS01165 PF13649 Methyltransferase domain HDN1F_RS01185 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_RS01185 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_RS01185 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_RS01195 PF13361 UvrD-like helicase C-terminal domain HDN1F_RS01195 PF00580 UvrD/REP helicase N-terminal domain HDN1F_RS01200 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HDN1F_RS01215 PF09190 DALR domain HDN1F_RS01215 PF01406 tRNA synthetases class I (C) catalytic domain HDN1F_RS01220 PF02824 TGS domain HDN1F_RS01220 PF03129 Anticodon binding domain HDN1F_RS01220 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HDN1F_RS01220 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HDN1F_RS01260 PF00391 PEP-utilising enzyme, mobile domain HDN1F_RS01260 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HDN1F_RS01270 PF00668 Condensation domain HDN1F_RS01270 PF00501 AMP-binding enzyme HDN1F_RS01270 PF00550 Phosphopantetheine attachment site HDN1F_RS01270 PF13193 AMP-binding enzyme C-terminal domain HDN1F_RS01300 PF03831 PhnA domain HDN1F_RS01300 PF08274 PhnA Zinc-Ribbon HDN1F_RS01305 PF03707 Bacterial signalling protein N terminal repeat HDN1F_RS01305 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_RS01305 PF00563 EAL domain HDN1F_RS01320 PF01575 MaoC like domain HDN1F_RS01325 PF00108 Thiolase, N-terminal domain HDN1F_RS01325 PF02803 Thiolase, C-terminal domain HDN1F_RS01330 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain HDN1F_RS01330 PF06974 Protein of unknown function (DUF1298) HDN1F_RS01335 PF00106 short chain dehydrogenase HDN1F_RS01340 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HDN1F_RS01340 PF07992 Pyridine nucleotide-disulphide oxidoreductase HDN1F_RS01355 PF00501 AMP-binding enzyme HDN1F_RS01355 PF13193 AMP-binding enzyme C-terminal domain HDN1F_RS01360 PF00890 FAD binding domain HDN1F_RS01395 PF00037 4Fe-4S binding domain HDN1F_RS01395 PF11953 Domain of unknown function (DUF3470) HDN1F_RS01420 PF06472 ABC transporter transmembrane region 2 HDN1F_RS01420 PF00005 ABC transporter HDN1F_RS01425 PF04286 Protein of unknown function (DUF445) HDN1F_RS01430 PF03435 Saccharopine dehydrogenase NADP binding domain HDN1F_RS01435 PF12680 SnoaL-like domain HDN1F_RS01445 PF00355 Rieske [2Fe-2S] domain HDN1F_RS01485 PF09820 Predicted AAA-ATPase HDN1F_RS01485 PF08011 PD-(D/E)XK nuclease superfamily HDN1F_RS01490 PF01042 Endoribonuclease L-PSP HDN1F_RS01495 PF02824 TGS domain HDN1F_RS01495 PF04607 Region found in RelA / SpoT proteins HDN1F_RS01495 PF13291 ACT domain HDN1F_RS01500 PF01192 RNA polymerase Rpb6 HDN1F_RS01505 PF07690 Major Facilitator Superfamily HDN1F_RS01510 PF13533 Biotin-lipoyl like HDN1F_RS01520 PF07690 Major Facilitator Superfamily HDN1F_RS01525 PF01769 Divalent cation transporter HDN1F_RS01525 PF03448 MgtE intracellular N domain HDN1F_RS01525 PF00571 CBS domain HDN1F_RS01530 PF02798 Glutathione S-transferase, N-terminal domain HDN1F_RS01535 PF13230 Glutamine amidotransferases class-II HDN1F_RS01540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_RS01540 PF00072 Response regulator receiver domain HDN1F_RS01540 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_RS01540 PF09308 LuxQ, periplasmic HDN1F_RS01550 PF13472 GDSL-like Lipase/Acylhydrolase family HDN1F_RS01560 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_RS01560 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_RS01565 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_RS01565 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_RS01565 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_RS01570 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HDN1F_RS01570 PF00529 HlyD membrane-fusion protein of T1SS HDN1F_RS01575 PF00873 AcrB/AcrD/AcrF family HDN1F_RS01585 PF00202 Aminotransferase class-III HDN1F_RS01595 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HDN1F_RS01595 PF00529 HlyD membrane-fusion protein of T1SS HDN1F_RS01600 PF00873 AcrB/AcrD/AcrF family HDN1F_RS01605 PF09335 SNARE associated Golgi protein HDN1F_RS01615 PF02581 Thiamine monophosphate synthase HDN1F_RS01620 PF08543 Phosphomethylpyrimidine kinase HDN1F_RS01620 PF02581 Thiamine monophosphate synthase HDN1F_RS01660 PF00829 Ribosomal prokaryotic L21 protein HDN1F_RS01665 PF01016 Ribosomal L27 protein HDN1F_RS01670 PF01926 50S ribosome-binding GTPase HDN1F_RS01670 PF01018 GTP1/OBG HDN1F_RS01675 PF01472 PUA domain HDN1F_RS01675 PF00696 Amino acid kinase family HDN1F_RS01680 PF01649 Ribosomal protein S20 HDN1F_RS01685 PF06574 FAD synthetase HDN1F_RS01685 PF01687 Riboflavin kinase HDN1F_RS01690 PF06827 Zinc finger found in FPG and IleRS HDN1F_RS01690 PF00133 tRNA synthetases class I (I, L, M and V) HDN1F_RS01690 PF08264 Anticodon-binding domain of tRNA HDN1F_RS01695 PF01252 Signal peptidase (SPase) II HDN1F_RS01700 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HDN1F_RS01705 PF02401 LytB protein HDN1F_RS01710 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor HDN1F_RS01710 PF07963 Prokaryotic N-terminal methylation motif HDN1F_RS01740 PF01266 FAD dependent oxidoreductase HDN1F_RS01745 PF02954 Bacterial regulatory protein, Fis family HDN1F_RS01745 PF00072 Response regulator receiver domain HDN1F_RS01745 PF00158 Sigma-54 interaction domain HDN1F_RS01755 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_RS01755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_RS01765 PF13525 Outer membrane lipoprotein HDN1F_RS01770 PF00849 RNA pseudouridylate synthase HDN1F_RS01770 PF01479 S4 domain HDN1F_RS01775 PF02578 Multi-copper polyphenol oxidoreductase laccase HDN1F_RS01780 PF00004 ATPase family associated with various cellular activities (AAA) HDN1F_RS01780 PF07724 AAA domain (Cdc48 subfamily) HDN1F_RS01780 PF17871 AAA lid domain HDN1F_RS01780 PF10431 C-terminal, D2-small domain, of ClpB protein HDN1F_RS01780 PF02861 Clp amino terminal domain, pathogenicity island component HDN1F_RS01790 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HDN1F_RS01790 PF00205 Thiamine pyrophosphate enzyme, central domain HDN1F_RS01790 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HDN1F_RS01795 PF10369 Small subunit of acetolactate synthase HDN1F_RS01800 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain HDN1F_RS01800 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain HDN1F_RS01805 PF01066 CDP-alcohol phosphatidyltransferase HDN1F_RS01860 PF03143 Elongation factor Tu C-terminal domain HDN1F_RS01860 PF03144 Elongation factor Tu domain 2 HDN1F_RS01860 PF00009 Elongation factor Tu GTP binding domain HDN1F_RS01870 PF00584 SecE/Sec61-gamma subunits of protein translocation complex HDN1F_RS01875 PF02357 Transcription termination factor nusG HDN1F_RS01875 PF00467 KOW motif HDN1F_RS01880 PF00298 Ribosomal protein L11, RNA binding domain HDN1F_RS01880 PF03946 Ribosomal protein L11, N-terminal domain HDN1F_RS01885 PF00687 Ribosomal protein L1p/L10e family HDN1F_RS01890 PF00466 Ribosomal protein L10 HDN1F_RS01895 PF16320 Ribosomal protein L7/L12 dimerisation domain HDN1F_RS01895 PF00542 Ribosomal protein L7/L12 C-terminal domain HDN1F_RS01900 PF04561 RNA polymerase Rpb2, domain 2 HDN1F_RS01900 PF04563 RNA polymerase beta subunit HDN1F_RS01900 PF04560 RNA polymerase Rpb2, domain 7 HDN1F_RS01900 PF00562 RNA polymerase Rpb2, domain 6 HDN1F_RS01900 PF10385 RNA polymerase beta subunit external 1 domain HDN1F_RS01900 PF04565 RNA polymerase Rpb2, domain 3 HDN1F_RS01905 PF04997 RNA polymerase Rpb1, domain 1 HDN1F_RS01905 PF00623 RNA polymerase Rpb1, domain 2 HDN1F_RS01905 PF04983 RNA polymerase Rpb1, domain 3 HDN1F_RS01905 PF05000 RNA polymerase Rpb1, domain 4 HDN1F_RS01905 PF04998 RNA polymerase Rpb1, domain 5 HDN1F_RS01910 PF00164 Ribosomal protein S12/S23 HDN1F_RS01915 PF00177 Ribosomal protein S7p/S5e HDN1F_RS01920 PF14492 Elongation Factor G, domain II HDN1F_RS01920 PF03764 Elongation factor G, domain IV HDN1F_RS01920 PF03144 Elongation factor Tu domain 2 HDN1F_RS01920 PF00009 Elongation factor Tu GTP binding domain HDN1F_RS01920 PF00679 Elongation factor G C-terminus HDN1F_RS01925 PF03143 Elongation factor Tu C-terminal domain HDN1F_RS01925 PF03144 Elongation factor Tu domain 2 HDN1F_RS01925 PF00009 Elongation factor Tu GTP binding domain HDN1F_RS01930 PF00338 Ribosomal protein S10p/S20e HDN1F_RS01935 PF00297 Ribosomal protein L3 HDN1F_RS01940 PF00573 Ribosomal protein L4/L1 family HDN1F_RS01945 PF00276 Ribosomal protein L23 HDN1F_RS01950 PF00181 Ribosomal Proteins L2, RNA binding domain HDN1F_RS01950 PF03947 Ribosomal Proteins L2, C-terminal domain HDN1F_RS01955 PF00203 Ribosomal protein S19 HDN1F_RS01960 PF00237 Ribosomal protein L22p/L17e HDN1F_RS01965 PF07650 KH domain HDN1F_RS01965 PF00189 Ribosomal protein S3, C-terminal domain HDN1F_RS01970 PF00252 Ribosomal protein L16p/L10e HDN1F_RS01975 PF00831 Ribosomal L29 protein HDN1F_RS01980 PF00366 Ribosomal protein S17 HDN1F_RS01985 PF00238 Ribosomal protein L14p/L23e HDN1F_RS01990 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 HDN1F_RS01990 PF00467 KOW motif HDN1F_RS01995 PF00673 ribosomal L5P family C-terminus HDN1F_RS01995 PF00281 Ribosomal protein L5 HDN1F_RS02000 PF00253 Ribosomal protein S14p/S29e HDN1F_RS02005 PF00410 Ribosomal protein S8 HDN1F_RS02010 PF00347 Ribosomal protein L6 HDN1F_RS02015 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast HDN1F_RS02020 PF03719 Ribosomal protein S5, C-terminal domain HDN1F_RS02020 PF00333 Ribosomal protein S5, N-terminal domain HDN1F_RS02025 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A HDN1F_RS02030 PF00344 SecY translocase HDN1F_RS02035 PF00416 Ribosomal protein S13/S18 HDN1F_RS02040 PF00411 Ribosomal protein S11 HDN1F_RS02045 PF00163 Ribosomal protein S4/S9 N-terminal domain HDN1F_RS02045 PF01479 S4 domain HDN1F_RS02050 PF01000 RNA polymerase Rpb3/RpoA insert domain HDN1F_RS02050 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain HDN1F_RS02050 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain HDN1F_RS02055 PF01196 Ribosomal protein L17 HDN1F_RS02060 PF17755 UvrA DNA-binding domain HDN1F_RS02060 PF17760 UvrA interaction domain HDN1F_RS02065 PF00436 Single-strand binding protein family HDN1F_RS02105 PF02384 N-6 DNA Methylase HDN1F_RS02115 PF00271 Helicase conserved C-terminal domain HDN1F_RS02115 PF00570 HRDC domain HDN1F_RS02115 PF16124 RecQ zinc-binding HDN1F_RS02115 PF00270 DEAD/DEAH box helicase HDN1F_RS02115 PF09382 RQC domain HDN1F_RS02120 PF02481 DNA recombination-mediator protein A HDN1F_RS02120 PF17782 DprA winged helix domain HDN1F_RS02125 PF18766 SWI2/SNF2 ATPase HDN1F_RS02125 PF11867 Domain of unknown function (DUF3387) HDN1F_RS02125 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) HDN1F_RS02135 PF11356 Type II secretion system protein C HDN1F_RS02140 PF03958 Bacterial type II/III secretion system short domain HDN1F_RS02140 PF00263 Bacterial type II and III secretion system protein HDN1F_RS02145 PF00156 Phosphoribosyl transferase domain HDN1F_RS02150 PF06968 Biotin and Thiamin Synthesis associated domain HDN1F_RS02150 PF04055 Radical SAM superfamily HDN1F_RS02155 PF00155 Aminotransferase class I and II HDN1F_RS02160 PF00561 alpha/beta hydrolase fold HDN1F_RS02165 PF08241 Methyltransferase domain HDN1F_RS02175 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HDN1F_RS02175 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HDN1F_RS02180 PF02913 FAD linked oxidases, C-terminal domain HDN1F_RS02180 PF01565 FAD binding domain HDN1F_RS02185 PF01557 Fumarylacetoacetate (FAA) hydrolase family HDN1F_RS02190 PF01507 Phosphoadenosine phosphosulfate reductase family HDN1F_RS02195 PF12833 Helix-turn-helix domain HDN1F_RS02195 PF12852 Cupin HDN1F_RS02200 PF00487 Fatty acid desaturase HDN1F_RS02205 PF02954 Bacterial regulatory protein, Fis family HDN1F_RS02205 PF00072 Response regulator receiver domain HDN1F_RS02205 PF00158 Sigma-54 interaction domain HDN1F_RS02210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_RS02210 PF08447 PAS fold HDN1F_RS02210 PF00989 PAS fold HDN1F_RS02210 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_RS02220 PF00749 tRNA synthetases class I (E and Q), catalytic domain HDN1F_RS02225 PF01258 Prokaryotic dksA/traR C4-type zinc finger HDN1F_RS02230 PF00155 Aminotransferase class I and II HDN1F_RS02235 PF03466 LysR substrate binding domain HDN1F_RS02235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HDN1F_RS02240 PF01145 SPFH domain / Band 7 family HDN1F_RS02240 PF16200 C-terminal region of band_7 HDN1F_RS02260 PF12706 Beta-lactamase superfamily domain HDN1F_RS02260 PF00753 Metallo-beta-lactamase superfamily HDN1F_RS02275 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_RS02275 PF01590 GAF domain HDN1F_RS02275 PF00563 EAL domain HDN1F_RS02275 PF00360 Phytochrome region HDN1F_RS02280 PF03099 Biotin/lipoate A/B protein ligase family HDN1F_RS02290 PF00768 D-alanyl-D-alanine carboxypeptidase HDN1F_RS02290 PF07943 Penicillin-binding protein 5, C-terminal domain HDN1F_RS02295 PF03330 Lytic transglycolase HDN1F_RS02295 PF05036 Sporulation related domain HDN1F_RS02300 PF13406 Transglycosylase SLT domain HDN1F_RS02305 PF01098 Cell cycle protein HDN1F_RS02310 PF03717 Penicillin-binding Protein dimerisation domain HDN1F_RS02310 PF00905 Penicillin binding protein transpeptidase domain HDN1F_RS02315 PF02590 Predicted SPOUT methyltransferase HDN1F_RS02325 PF01467 Cytidylyltransferase-like HDN1F_RS02330 PF00171 Aldehyde dehydrogenase family HDN1F_RS02360 PF05567 Neisseria PilC beta-propeller domain HDN1F_RS02365 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor HDN1F_RS02365 PF07963 Prokaryotic N-terminal methylation motif HDN1F_RS02390 PF08502 LeuA allosteric (dimerisation) domain HDN1F_RS02390 PF00682 HMGL-like HDN1F_RS02395 PF01037 Lrp/AsnC ligand binding domain HDN1F_RS02400 PF08011 PD-(D/E)XK nuclease superfamily HDN1F_RS02400 PF09820 Predicted AAA-ATPase HDN1F_RS02405 PF09820 Predicted AAA-ATPase HDN1F_RS02405 PF08011 PD-(D/E)XK nuclease superfamily HDN1F_RS02420 PF01032 FecCD transport family HDN1F_RS02425 PF00005 ABC transporter HDN1F_RS02430 PF00563 EAL domain HDN1F_RS02430 PF03707 Bacterial signalling protein N terminal repeat HDN1F_RS02430 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_RS02435 PF00175 Oxidoreductase NAD-binding domain HDN1F_RS02435 PF00667 FAD binding domain HDN1F_RS02435 PF00258 Flavodoxin HDN1F_RS02435 PF00067 Cytochrome P450 HDN1F_RS02445 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HDN1F_RS02445 PF00384 Molybdopterin oxidoreductase HDN1F_RS02445 PF01568 Molydopterin dinucleotide binding domain HDN1F_RS02450 PF00465 Iron-containing alcohol dehydrogenase HDN1F_RS02455 PF13536 Putative multidrug resistance efflux transporter HDN1F_RS02460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HDN1F_RS02460 PF00672 HAMP domain HDN1F_RS02465 PF04304 Protein of unknown function (DUF454) HDN1F_RS02485 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin HDN1F_RS02490 PF01850 PIN domain HDN1F_RS02530 PF00403 Heavy-metal-associated domain HDN1F_RS02535 PF00873 AcrB/AcrD/AcrF family HDN1F_RS02540 PF00529 HlyD membrane-fusion protein of T1SS HDN1F_RS02540 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HDN1F_RS02545 PF02321 Outer membrane efflux protein HDN1F_RS02555 PF13700 Domain of unknown function (DUF4158) HDN1F_RS02555 PF01526 Tn3 transposase DDE domain HDN1F_RS02560 PF00080 Copper/zinc superoxide dismutase (SODC) HDN1F_RS02565 PF00905 Penicillin binding protein transpeptidase domain HDN1F_RS02570 PF08331 Domain of unknown function (DUF1730) HDN1F_RS02585 PF03459 TOBE domain HDN1F_RS02585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HDN1F_RS02630 PF00005 ABC transporter HDN1F_RS02640 PF03781 Sulfatase-modifying factor enzyme 1 HDN1F_RS02655 PF03755 YicC-like family, N-terminal region HDN1F_RS02655 PF08340 Domain of unknown function (DUF1732) HDN1F_RS02660 PF03725 3' exoribonuclease family, domain 2 HDN1F_RS02660 PF01138 3' exoribonuclease family, domain 1 HDN1F_RS02665 PF03372 Endonuclease/Exonuclease/phosphatase family HDN1F_RS02670 PF00156 Phosphoribosyl transferase domain HDN1F_RS02680 PF00440 Bacterial regulatory proteins, tetR family HDN1F_RS02685 PF00696 Amino acid kinase family HDN1F_RS02690 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HDN1F_RS02690 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HDN1F_RS02690 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HDN1F_RS02690 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HDN1F_RS02695 PF02441 Flavoprotein HDN1F_RS02695 PF04127 DNA / pantothenate metabolism flavoprotein HDN1F_RS02700 PF04002 RadC-like JAB domain HDN1F_RS02705 PF00830 Ribosomal L28 family HDN1F_RS02710 PF00471 Ribosomal protein L33 HDN1F_RS02715 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain HDN1F_RS02715 PF06827 Zinc finger found in FPG and IleRS HDN1F_RS02715 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain HDN1F_RS02730 PF01467 Cytidylyltransferase-like HDN1F_RS02745 PF00293 NUDIX domain HDN1F_RS02750 PF00171 Aldehyde dehydrogenase family HDN1F_RS02765 PF13806 Rieske-like [2Fe-2S] domain HDN1F_RS02765 PF18267 Rubredoxin NAD+ reductase C-terminal domain HDN1F_RS02765 PF04324 BFD-like [2Fe-2S] binding domain HDN1F_RS02765 PF07992 Pyridine nucleotide-disulphide oxidoreductase HDN1F_RS02765 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HDN1F_RS02765 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HDN1F_RS02770 PF13806 Rieske-like [2Fe-2S] domain HDN1F_RS02775 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HDN1F_RS02780 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HDN1F_RS02780 PF01565 FAD binding domain HDN1F_RS02785 PF00561 alpha/beta hydrolase fold HDN1F_RS02795 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HDN1F_RS02795 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HDN1F_RS02795 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HDN1F_RS02800 PF02397 Bacterial sugar transferase HDN1F_RS02830 PF01522 Polysaccharide deacetylase HDN1F_RS02840 PF07478 D-ala D-ala ligase C-terminus HDN1F_RS02840 PF01820 D-ala D-ala ligase N-terminus HDN1F_RS02845 PF01522 Polysaccharide deacetylase HDN1F_RS02880 PF01757 Acyltransferase family HDN1F_RS02885 PF01451 Low molecular weight phosphotyrosine protein phosphatase HDN1F_RS02890 PF00664 ABC transporter transmembrane region HDN1F_RS02890 PF00005 ABC transporter HDN1F_RS02905 PF00535 Glycosyl transferase family 2 HDN1F_RS02910 PF05951 Bacterial protein of unknown function (DUF882) HDN1F_RS02915 PF01471 Putative peptidoglycan binding domain HDN1F_RS02915 PF03734 L,D-transpeptidase catalytic domain HDN1F_RS02920 PF02801 Beta-ketoacyl synthase, C-terminal domain HDN1F_RS02920 PF00109 Beta-ketoacyl synthase, N-terminal domain HDN1F_RS02920 PF16197 Ketoacyl-synthetase C-terminal extension HDN1F_RS02920 PF00668 Condensation domain HDN1F_RS02920 PF00550 Phosphopantetheine attachment site HDN1F_RS02920 PF00698 Acyl transferase domain HDN1F_RS02925 PF00550 Phosphopantetheine attachment site HDN1F_RS02925 PF02801 Beta-ketoacyl synthase, C-terminal domain HDN1F_RS02925 PF00109 Beta-ketoacyl synthase, N-terminal domain HDN1F_RS02925 PF16197 Ketoacyl-synthetase C-terminal extension HDN1F_RS02925 PF00668 Condensation domain HDN1F_RS02925 PF13193 AMP-binding enzyme C-terminal domain HDN1F_RS02925 PF00202 Aminotransferase class-III HDN1F_RS02925 PF00501 AMP-binding enzyme HDN1F_RS02930 PF00550 Phosphopantetheine attachment site HDN1F_RS02930 PF00501 AMP-binding enzyme HDN1F_RS02930 PF00975 Thioesterase domain HDN1F_RS02930 PF00668 Condensation domain HDN1F_RS02930 PF13193 AMP-binding enzyme C-terminal domain HDN1F_RS02935 PF00550 Phosphopantetheine attachment site HDN1F_RS02935 PF00501 AMP-binding enzyme HDN1F_RS02935 PF13193 AMP-binding enzyme C-terminal domain HDN1F_RS02935 PF00668 Condensation domain HDN1F_RS02935 PF00975 Thioesterase domain HDN1F_RS02940 PF02535 ZIP Zinc transporter HDN1F_RS02945 PF10415 Fumarase C C-terminus HDN1F_RS02945 PF00206 Lyase HDN1F_RS02955 PF00149 Calcineurin-like phosphoesterase HDN1F_RS02955 PF12320 Type 5 capsule protein repressor C-terminal domain HDN1F_RS02960 PF05724 Thiopurine S-methyltransferase (TPMT) HDN1F_RS02965 PF04734 Neutral/alkaline non-lysosomal ceramidase, N-terminal HDN1F_RS02965 PF17048 Neutral/alkaline non-lysosomal ceramidase, C-terminal HDN1F_RS02975 PF01292 Prokaryotic cytochrome b561 HDN1F_RS02980 PF04264 YceI-like domain HDN1F_RS02985 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ HDN1F_RS02990 PF07194 P2 response regulator binding domain HDN1F_RS02990 PF01627 Hpt domain HDN1F_RS02990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_RS02990 PF01584 CheW-like domain HDN1F_RS02990 PF02895 Signal transducing histidine kinase, homodimeric domain HDN1F_RS03000 PF00271 Helicase conserved C-terminal domain HDN1F_RS03000 PF12419 SNF2 Helicase protein HDN1F_RS03000 PF00176 SNF2 family N-terminal domain HDN1F_RS03005 PF03330 Lytic transglycolase HDN1F_RS03010 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HDN1F_RS03015 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HDN1F_RS03020 PF02910 Fumarate reductase flavoprotein C-term HDN1F_RS03020 PF00890 FAD binding domain HDN1F_RS03025 PF13085 2Fe-2S iron-sulfur cluster binding domain HDN1F_RS03035 PF00893 Small Multidrug Resistance protein HDN1F_RS03040 PF00258 Flavodoxin HDN1F_RS03040 PF00175 Oxidoreductase NAD-binding domain HDN1F_RS03040 PF00667 FAD binding domain HDN1F_RS03045 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HDN1F_RS03045 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HDN1F_RS03050 PF10531 SLBB domain HDN1F_RS03050 PF02563 Polysaccharide biosynthesis/export protein HDN1F_RS03110 PF00535 Glycosyl transferase family 2 HDN1F_RS03115 PF00534 Glycosyl transferases group 1 HDN1F_RS03115 PF13439 Glycosyltransferase Family 4 HDN1F_RS03125 PF01757 Acyltransferase family HDN1F_RS03145 PF13007 Transposase C of IS166 homeodomain HDN1F_RS03145 PF13817 IS66 C-terminal element HDN1F_RS03145 PF13005 zinc-finger binding domain of transposase IS66 HDN1F_RS03145 PF03050 Transposase IS66 family HDN1F_RS03150 PF05717 IS66 Orf2 like protein HDN1F_RS03165 PF02637 GatB domain HDN1F_RS03165 PF02934 GatB/GatE catalytic domain HDN1F_RS03170 PF01425 Amidase HDN1F_RS03175 PF02686 Glu-tRNAGln amidotransferase C subunit HDN1F_RS03185 PF04085 rod shape-determining protein MreC HDN1F_RS03190 PF04093 rod shape-determining protein MreD HDN1F_RS03195 PF02545 Maf-like protein HDN1F_RS03200 PF00575 S1 RNA binding domain HDN1F_RS03200 PF10150 Ribonuclease E/G family HDN1F_RS03210 PF00795 Carbon-nitrogen hydrolase HDN1F_RS03215 PF04751 Protein of unknown function (DUF615) HDN1F_RS03220 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HDN1F_RS03220 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HDN1F_RS03225 PF00381 PTS HPr component phosphorylation site HDN1F_RS03230 PF03668 P-loop ATPase protein family HDN1F_RS03235 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HDN1F_RS03240 PF00309 Sigma-54 factor, Activator interacting domain (AID) HDN1F_RS03240 PF04552 Sigma-54, DNA binding domain HDN1F_RS03240 PF04963 Sigma-54 factor, core binding domain HDN1F_RS03245 PF12399 Branched-chain amino acid ATP-binding cassette transporter HDN1F_RS03245 PF00005 ABC transporter HDN1F_RS03250 PF03968 OstA-like protein HDN1F_RS03260 PF01380 SIS domain HDN1F_RS03260 PF00571 CBS domain HDN1F_RS03265 PF00005 ABC transporter HDN1F_RS03270 PF02405 Permease MlaE HDN1F_RS03275 PF02470 MlaD protein HDN1F_RS03285 PF01722 BolA-like protein HDN1F_RS03290 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HDN1F_RS03295 PF01634 ATP phosphoribosyltransferase HDN1F_RS03300 PF00815 Histidinol dehydrogenase HDN1F_RS03305 PF00155 Aminotransferase class I and II HDN1F_RS03310 PF17820 PDZ domain HDN1F_RS03310 PF13180 PDZ domain HDN1F_RS03315 PF01784 NIF3 (NGG1p interacting factor 3) HDN1F_RS03320 PF14306 PUA-like domain HDN1F_RS03320 PF01747 ATP-sulfurylase HDN1F_RS03325 PF00011 Hsp20/alpha crystallin family HDN1F_RS03335 PF02129 X-Pro dipeptidyl-peptidase (S15 family) HDN1F_RS03340 PF03969 AFG1-like ATPase HDN1F_RS03345 PF00572 Ribosomal protein L13 HDN1F_RS03350 PF00380 Ribosomal protein S9/S16 HDN1F_RS03355 PF00355 Rieske [2Fe-2S] domain HDN1F_RS03355 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal HDN1F_RS03360 PF00032 Cytochrome b(C-terminal)/b6/petD HDN1F_RS03360 PF00033 Cytochrome b/b6/petB HDN1F_RS03365 PF02167 Cytochrome C1 family HDN1F_RS03370 PF04386 Stringent starvation protein B HDN1F_RS03375 PF04972 BON domain HDN1F_RS03380 PF13580 SIS domain HDN1F_RS03390 PF02021 Uncharacterised protein family UPF0102 HDN1F_RS03395 PF04348 LppC putative lipoprotein HDN1F_RS03400 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HDN1F_RS03405 PF02381 MraZ protein, putative antitoxin-like HDN1F_RS03410 PF01795 MraW methylase family HDN1F_RS03415 PF04999 Cell division protein FtsL HDN1F_RS03420 PF00905 Penicillin binding protein transpeptidase domain HDN1F_RS03420 PF03717 Penicillin-binding Protein dimerisation domain HDN1F_RS03430 PF00953 Glycosyl transferase family 4 HDN1F_RS03430 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 HDN1F_RS03435 PF02875 Mur ligase family, glutamate ligase domain HDN1F_RS03435 PF08245 Mur ligase middle domain HDN1F_RS03440 PF01098 Cell cycle protein HDN1F_RS03445 PF03033 Glycosyltransferase family 28 N-terminal domain HDN1F_RS03445 PF04101 Glycosyltransferase family 28 C-terminal domain HDN1F_RS03450 PF08245 Mur ligase middle domain HDN1F_RS03450 PF01225 Mur ligase family, catalytic domain HDN1F_RS03450 PF02875 Mur ligase family, glutamate ligase domain HDN1F_RS03460 PF02491 SHS2 domain inserted in FTSA HDN1F_RS03465 PF12327 FtsZ family, C-terminal domain HDN1F_RS03465 PF00091 Tubulin/FtsZ family, GTPase domain HDN1F_RS03470 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase HDN1F_RS03480 PF02810 SEC-C motif HDN1F_RS03480 PF07517 SecA DEAD-like domain HDN1F_RS03480 PF01043 SecA preprotein cross-linking domain HDN1F_RS03480 PF07516 SecA Wing and Scaffold domain HDN1F_RS03485 PF01960 ArgJ family HDN1F_RS03490 PF00293 NUDIX domain HDN1F_RS03510 PF16363 GDP-mannose 4,6 dehydratase HDN1F_RS03515 PF04321 RmlD substrate binding domain HDN1F_RS03520 PF00483 Nucleotidyl transferase HDN1F_RS03525 PF16363 GDP-mannose 4,6 dehydratase HDN1F_RS03530 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase HDN1F_RS03535 PF00005 ABC transporter HDN1F_RS03535 PF12848 ABC transporter HDN1F_RS03545 PF02350 UDP-N-acetylglucosamine 2-epimerase HDN1F_RS03560 PF00005 ABC transporter HDN1F_RS03575 PF10634 Fe2+ transport protein HDN1F_RS03585 PF13473 Cupredoxin-like domain HDN1F_RS03600 PF01169 Uncharacterized protein family UPF0016 HDN1F_RS03605 PF00117 Glutamine amidotransferase class-I HDN1F_RS03610 PF00270 DEAD/DEAH box helicase HDN1F_RS03610 PF09369 Domain of unknown function (DUF1998) HDN1F_RS03610 PF00271 Helicase conserved C-terminal domain HDN1F_RS03615 PF00271 Helicase conserved C-terminal domain HDN1F_RS03615 PF00176 SNF2 family N-terminal domain HDN1F_RS03630 PF02661 Fic/DOC family HDN1F_RS03630 PF12728 Helix-turn-helix domain HDN1F_RS03665 PF00589 Phage integrase family HDN1F_RS03665 PF13356 Arm DNA-binding domain HDN1F_RS03685 PF04362 Bacterial Fe(2+) trafficking HDN1F_RS03690 PF00730 HhH-GPD superfamily base excision DNA repair protein HDN1F_RS03690 PF00633 Helix-hairpin-helix motif HDN1F_RS03690 PF10576 Iron-sulfur binding domain of endonuclease III HDN1F_RS03690 PF14815 NUDIX domain HDN1F_RS03695 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HDN1F_RS03695 PF00672 HAMP domain HDN1F_RS03695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_RS03695 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_RS03695 PF01627 Hpt domain HDN1F_RS03695 PF00072 Response regulator receiver domain HDN1F_RS03700 PF00475 Imidazoleglycerol-phosphate dehydratase HDN1F_RS03705 PF00117 Glutamine amidotransferase class-I HDN1F_RS03710 PF00977 Histidine biosynthesis protein HDN1F_RS03715 PF00977 Histidine biosynthesis protein HDN1F_RS03720 PF13180 PDZ domain HDN1F_RS03720 PF03572 Peptidase family S41 HDN1F_RS03730 PF06415 BPG-independent PGAM N-terminus (iPGM_N) HDN1F_RS03730 PF01676 Metalloenzyme superfamily HDN1F_RS03735 PF00581 Rhodanese-like domain HDN1F_RS03740 PF00462 Glutaredoxin HDN1F_RS03745 PF02556 Preprotein translocase subunit SecB HDN1F_RS03750 PF00588 SpoU rRNA Methylase family HDN1F_RS03765 PF03951 Glutamine synthetase, beta-Grasp domain HDN1F_RS03765 PF00120 Glutamine synthetase, catalytic domain HDN1F_RS03770 PF00581 Rhodanese-like domain HDN1F_RS03770 PF01206 Sulfurtransferase TusA HDN1F_RS03780 PF03144 Elongation factor Tu domain 2 HDN1F_RS03780 PF00679 Elongation factor G C-terminus HDN1F_RS03780 PF00009 Elongation factor Tu GTP binding domain HDN1F_RS03800 PF02384 N-6 DNA Methylase HDN1F_RS03805 PF01420 Type I restriction modification DNA specificity domain HDN1F_RS03810 PF06250 YhcG PDDEXK nuclease domain HDN1F_RS03810 PF17761 DUF1016 N-terminal domain HDN1F_RS03815 PF11867 Domain of unknown function (DUF3387) HDN1F_RS03815 PF18766 SWI2/SNF2 ATPase HDN1F_RS03815 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) HDN1F_RS03820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HDN1F_RS03820 PF00672 HAMP domain HDN1F_RS03840 PF01039 Carboxyl transferase domain HDN1F_RS03845 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HDN1F_RS03845 PF02785 Biotin carboxylase C-terminal domain HDN1F_RS03845 PF00289 Biotin carboxylase, N-terminal domain HDN1F_RS03860 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain HDN1F_RS03860 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain HDN1F_RS03865 PF03061 Thioesterase superfamily HDN1F_RS03865 PF07085 DRTGG domain HDN1F_RS03865 PF00392 Bacterial regulatory proteins, gntR family HDN1F_RS03865 PF00571 CBS domain HDN1F_RS03875 PF00271 Helicase conserved C-terminal domain HDN1F_RS03875 PF18019 HD domain HDN1F_RS03875 PF00270 DEAD/DEAH box helicase HDN1F_RS03890 PF09344 CT1975-like protein HDN1F_RS03895 PF09704 CRISPR-associated protein (Cas_Cas5) HDN1F_RS03910 PF01867 CRISPR associated protein Cas1 HDN1F_RS03915 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) HDN1F_RS03920 PF01510 N-acetylmuramoyl-L-alanine amidase HDN1F_RS03930 PF17831 Pyruvate dehydrogenase E1 component middle domain HDN1F_RS03930 PF00456 Transketolase, thiamine diphosphate binding domain HDN1F_RS03935 PF02817 e3 binding domain HDN1F_RS03935 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HDN1F_RS03935 PF00364 Biotin-requiring enzyme HDN1F_RS03975 PF00067 Cytochrome P450 HDN1F_RS03980 PF01590 GAF domain HDN1F_RS03980 PF00563 EAL domain HDN1F_RS03980 PF00360 Phytochrome region HDN1F_RS03980 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_RS03985 PF00694 Aconitase C-terminal domain HDN1F_RS03985 PF00330 Aconitase family (aconitate hydratase) HDN1F_RS04005 PF04011 LemA family HDN1F_RS04020 PF02163 Peptidase family M50 HDN1F_RS04020 PF17820 PDZ domain HDN1F_RS04030 PF00916 Sulfate permease family HDN1F_RS04030 PF01740 STAS domain HDN1F_RS04040 PF00672 HAMP domain HDN1F_RS04040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HDN1F_RS04040 PF12729 Four helix bundle sensory module for signal transduction HDN1F_RS04045 PF03150 Di-haem cytochrome c peroxidase HDN1F_RS04060 PF00174 Oxidoreductase molybdopterin binding domain HDN1F_RS04065 PF01794 Ferric reductase like transmembrane component HDN1F_RS04085 PF00155 Aminotransferase class I and II HDN1F_RS04090 PF04315 Elongation factor P hydroxylase HDN1F_RS04095 PF01678 Diaminopimelate epimerase HDN1F_RS04100 PF02540 NAD synthase HDN1F_RS04105 PF00667 FAD binding domain HDN1F_RS04105 PF00258 Flavodoxin HDN1F_RS04105 PF00175 Oxidoreductase NAD-binding domain HDN1F_RS04120 PF02237 Biotin protein ligase C terminal domain HDN1F_RS04120 PF03099 Biotin/lipoate A/B protein ligase family HDN1F_RS04135 PF12833 Helix-turn-helix domain HDN1F_RS04135 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term HDN1F_RS04145 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_RS04145 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_RS04145 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_RS04155 PF00155 Aminotransferase class I and II HDN1F_RS04160 PF17113 Regulatory signalling modulator protein AmpE HDN1F_RS04160 PF03186 CobD/Cbib protein HDN1F_RS04170 PF02654 Cobalamin-5-phosphate synthase HDN1F_RS04180 PF02277 Phosphoribosyltransferase HDN1F_RS04185 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase HDN1F_RS04190 PF01923 Cobalamin adenosyltransferase HDN1F_RS04195 PF02558 Ketopantoate reductase PanE/ApbA HDN1F_RS04195 PF08546 Ketopantoate reductase PanE/ApbA C terminal HDN1F_RS04200 PF00486 Transcriptional regulatory protein, C terminal HDN1F_RS04200 PF00072 Response regulator receiver domain HDN1F_RS04210 PF08471 Class II vitamin B12-dependent ribonucleotide reductase HDN1F_RS04210 PF02867 Ribonucleotide reductase, barrel domain HDN1F_RS04235 PF00378 Enoyl-CoA hydratase/isomerase HDN1F_RS04250 PF00561 alpha/beta hydrolase fold HDN1F_RS04255 PF00271 Helicase conserved C-terminal domain HDN1F_RS04255 PF00176 SNF2 family N-terminal domain HDN1F_RS04270 PF06250 YhcG PDDEXK nuclease domain HDN1F_RS04270 PF17761 DUF1016 N-terminal domain HDN1F_RS04280 PF06250 YhcG PDDEXK nuclease domain HDN1F_RS04280 PF17761 DUF1016 N-terminal domain HDN1F_RS04310 PF00271 Helicase conserved C-terminal domain HDN1F_RS04310 PF00270 DEAD/DEAH box helicase HDN1F_RS04320 PF01425 Amidase HDN1F_RS04325 PF00521 DNA gyrase/topoisomerase IV, subunit A HDN1F_RS04325 PF03989 DNA gyrase C-terminal domain, beta-propeller HDN1F_RS04330 PF08240 Alcohol dehydrogenase GroES-like domain HDN1F_RS04330 PF00107 Zinc-binding dehydrogenase HDN1F_RS04335 PF00756 Putative esterase HDN1F_RS04340 PF03848 Tellurite resistance protein TehB HDN1F_RS04345 PF00085 Thioredoxin HDN1F_RS04360 PF01985 CRS1 / YhbY (CRM) domain HDN1F_RS04365 PF01728 FtsJ-like methyltransferase HDN1F_RS04370 PF01434 Peptidase family M41 HDN1F_RS04370 PF06480 FtsH Extracellular HDN1F_RS04370 PF17862 AAA+ lid domain HDN1F_RS04370 PF00004 ATPase family associated with various cellular activities (AAA) HDN1F_RS04375 PF00809 Pterin binding enzyme HDN1F_RS04380 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HDN1F_RS04380 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HDN1F_RS04380 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HDN1F_RS04380 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HDN1F_RS04385 PF00121 Triosephosphate isomerase HDN1F_RS04390 PF03840 Preprotein translocase SecG subunit HDN1F_RS04405 PF17384 RimP C-terminal SH3 domain HDN1F_RS04405 PF02576 RimP N-terminal domain HDN1F_RS04410 PF00575 S1 RNA binding domain HDN1F_RS04410 PF08529 NusA N-terminal domain HDN1F_RS04410 PF13184 NusA-like KH domain HDN1F_RS04415 PF08364 Bacterial translation initiation factor IF-2 associated region HDN1F_RS04415 PF11987 Translation-initiation factor 2 HDN1F_RS04415 PF04760 Translation initiation factor IF-2, N-terminal region HDN1F_RS04415 PF00009 Elongation factor Tu GTP binding domain HDN1F_RS04420 PF02033 Ribosome-binding factor A HDN1F_RS04425 PF01509 TruB family pseudouridylate synthase (N terminal domain) HDN1F_RS04425 PF16198 tRNA pseudouridylate synthase B C-terminal domain HDN1F_RS04425 PF09157 Pseudouridine synthase II TruB, C-terminal HDN1F_RS04430 PF00312 Ribosomal protein S15 HDN1F_RS04435 PF00575 S1 RNA binding domain HDN1F_RS04435 PF03725 3' exoribonuclease family, domain 2 HDN1F_RS04435 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain HDN1F_RS04435 PF00013 KH domain HDN1F_RS04435 PF01138 3' exoribonuclease family, domain 1 HDN1F_RS04440 PF01852 START domain HDN1F_RS04450 PF14840 Processivity clamp loader gamma complex DNA pol III C-term HDN1F_RS04450 PF06144 DNA polymerase III, delta subunit HDN1F_RS04460 PF13603 Leucyl-tRNA synthetase, Domain 2 HDN1F_RS04460 PF00133 tRNA synthetases class I (I, L, M and V) HDN1F_RS04460 PF08264 Anticodon-binding domain of tRNA HDN1F_RS04460 PF09334 tRNA synthetases class I (M) HDN1F_RS04465 PF13419 Haloacid dehalogenase-like hydrolase HDN1F_RS04470 PF00795 Carbon-nitrogen hydrolase HDN1F_RS04475 PF00571 CBS domain HDN1F_RS04475 PF03471 Transporter associated domain HDN1F_RS04480 PF02130 Uncharacterized protein family UPF0054 HDN1F_RS04485 PF02562 PhoH-like protein HDN1F_RS04490 PF00919 Uncharacterized protein family UPF0004 HDN1F_RS04490 PF01938 TRAM domain HDN1F_RS04490 PF04055 Radical SAM superfamily HDN1F_RS04510 PF03653 Uncharacterised protein family (UPF0093) HDN1F_RS04515 PF01521 Iron-sulphur cluster biosynthesis HDN1F_RS04525 PF01551 Peptidase family M23 HDN1F_RS04525 PF04225 Opacity-associated protein A LysM-like domain HDN1F_RS04530 PF00579 tRNA synthetases class I (W and Y) HDN1F_RS04530 PF01479 S4 domain HDN1F_RS04560 PF03279 Bacterial lipid A biosynthesis acyltransferase HDN1F_RS04570 PF01571 Aminomethyltransferase folate-binding domain HDN1F_RS04575 PF03937 Flavinator of succinate dehydrogenase HDN1F_RS04585 PF02910 Fumarate reductase flavoprotein C-term HDN1F_RS04585 PF00890 FAD binding domain HDN1F_RS04605 PF01435 Peptidase family M48 HDN1F_RS04615 PF00109 Beta-ketoacyl synthase, N-terminal domain HDN1F_RS04615 PF02801 Beta-ketoacyl synthase, C-terminal domain HDN1F_RS04620 PF00108 Thiolase, N-terminal domain HDN1F_RS04620 PF02803 Thiolase, C-terminal domain HDN1F_RS04625 PF03707 Bacterial signalling protein N terminal repeat HDN1F_RS04625 PF00563 EAL domain HDN1F_RS04625 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_RS04655 PF01568 Molydopterin dinucleotide binding domain HDN1F_RS04655 PF00384 Molybdopterin oxidoreductase HDN1F_RS04655 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HDN1F_RS04680 PF00595 PDZ domain HDN1F_RS04710 PF00682 HMGL-like HDN1F_RS04710 PF08502 LeuA allosteric (dimerisation) domain HDN1F_RS04720 PF00583 Acetyltransferase (GNAT) family HDN1F_RS04725 PF00534 Glycosyl transferases group 1 HDN1F_RS04725 PF13439 Glycosyltransferase Family 4 HDN1F_RS04730 PF16658 Class II release factor RF3, C-terminal domain HDN1F_RS04730 PF03144 Elongation factor Tu domain 2 HDN1F_RS04730 PF00009 Elongation factor Tu GTP binding domain HDN1F_RS04735 PF00970 Oxidoreductase FAD-binding domain HDN1F_RS04735 PF00111 2Fe-2S iron-sulfur cluster binding domain HDN1F_RS04735 PF00175 Oxidoreductase NAD-binding domain HDN1F_RS04740 PF08338 Domain of unknown function (DUF1731) HDN1F_RS04740 PF01370 NAD dependent epimerase/dehydratase family HDN1F_RS04745 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HDN1F_RS04745 PF00364 Biotin-requiring enzyme HDN1F_RS04745 PF02817 e3 binding domain HDN1F_RS04750 PF02780 Transketolase, C-terminal domain HDN1F_RS04750 PF02779 Transketolase, pyrimidine binding domain HDN1F_RS04755 PF00676 Dehydrogenase E1 component HDN1F_RS04760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HDN1F_RS04760 PF08447 PAS fold HDN1F_RS04760 PF13426 PAS domain HDN1F_RS04765 PF14760 Rnk N-terminus HDN1F_RS04765 PF01272 Transcription elongation factor, GreA/GreB, C-term HDN1F_RS04770 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HDN1F_RS04770 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HDN1F_RS04780 PF08281 Sigma-70, region 4 HDN1F_RS04780 PF04542 Sigma-70 region 2 HDN1F_RS04790 PF03888 MucB/RseB N-terminal domain HDN1F_RS04790 PF17188 MucB/RseB C-terminal domain HDN1F_RS04795 PF06421 GTP-binding protein LepA C-terminus HDN1F_RS04795 PF03144 Elongation factor Tu domain 2 HDN1F_RS04795 PF00679 Elongation factor G C-terminus HDN1F_RS04795 PF00009 Elongation factor Tu GTP binding domain HDN1F_RS04800 PF10502 Signal peptidase, peptidase S26 HDN1F_RS04810 PF14622 Ribonuclease-III-like HDN1F_RS04810 PF00035 Double-stranded RNA binding motif HDN1F_RS04815 PF07650 KH domain HDN1F_RS04815 PF01926 50S ribosome-binding GTPase HDN1F_RS04820 PF11967 Recombination protein O N terminal HDN1F_RS04820 PF02565 Recombination protein O C terminal HDN1F_RS04825 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ HDN1F_RS04830 PF01648 4'-phosphopantetheinyl transferase superfamily HDN1F_RS04835 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HDN1F_RS04835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_RS04835 PF01627 Hpt domain HDN1F_RS04835 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_RS04835 PF00072 Response regulator receiver domain HDN1F_RS04835 PF00672 HAMP domain HDN1F_RS04840 PF00291 Pyridoxal-phosphate dependent enzyme HDN1F_RS04850 PF05958 tRNA (Uracil-5-)-methyltransferase HDN1F_RS04855 PF02824 TGS domain HDN1F_RS04855 PF04607 Region found in RelA / SpoT proteins HDN1F_RS04855 PF13291 ACT domain HDN1F_RS04860 PF00994 Probable molybdopterin binding domain HDN1F_RS04865 PF03453 MoeA N-terminal region (domain I and II) HDN1F_RS04865 PF00994 Probable molybdopterin binding domain HDN1F_RS04865 PF03454 MoeA C-terminal region (domain IV) HDN1F_RS04890 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HDN1F_RS04890 PF07992 Pyridine nucleotide-disulphide oxidoreductase HDN1F_RS04890 PF13247 4Fe-4S dicluster domain HDN1F_RS04895 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg HDN1F_RS04895 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase HDN1F_RS04895 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II HDN1F_RS04905 PF00892 EamA-like transporter family HDN1F_RS04910 PF03922 OmpW family HDN1F_RS04925 PF00873 AcrB/AcrD/AcrF family HDN1F_RS04930 PF00293 NUDIX domain HDN1F_RS04935 PF06853 Protein of unknown function (DUF1249) HDN1F_RS04940 PF00149 Calcineurin-like phosphoesterase HDN1F_RS04945 PF00291 Pyridoxal-phosphate dependent enzyme HDN1F_RS04950 PF02627 Carboxymuconolactone decarboxylase family HDN1F_RS04955 PF00043 Glutathione S-transferase, C-terminal domain HDN1F_RS04955 PF02798 Glutathione S-transferase, N-terminal domain HDN1F_RS04960 PF11953 Domain of unknown function (DUF3470) HDN1F_RS04960 PF00037 4Fe-4S binding domain HDN1F_RS04965 PF01624 MutS domain I HDN1F_RS04965 PF05192 MutS domain III HDN1F_RS04965 PF00488 MutS domain V HDN1F_RS04965 PF05190 MutS family domain IV HDN1F_RS04965 PF05188 MutS domain II HDN1F_RS04975 PF01385 Probable transposase HDN1F_RS04975 PF12323 Helix-turn-helix domain HDN1F_RS04975 PF07282 Putative transposase DNA-binding domain HDN1F_RS04980 PF02464 Competence-damaged protein HDN1F_RS04985 PF00154 recA bacterial DNA recombination protein HDN1F_RS04990 PF03459 TOBE domain HDN1F_RS04990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HDN1F_RS05000 PF00528 Binding-protein-dependent transport system inner membrane component HDN1F_RS05005 PF12857 TOBE-like domain HDN1F_RS05005 PF00005 ABC transporter HDN1F_RS05010 PF07715 TonB-dependent Receptor Plug Domain HDN1F_RS05010 PF00593 TonB dependent receptor HDN1F_RS05025 PF00106 short chain dehydrogenase HDN1F_RS05030 PF07992 Pyridine nucleotide-disulphide oxidoreductase HDN1F_RS05030 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HDN1F_RS05040 PF03459 TOBE domain HDN1F_RS05040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HDN1F_RS05045 PF04055 Radical SAM superfamily HDN1F_RS05045 PF06969 HemN C-terminal domain HDN1F_RS05050 PF00027 Cyclic nucleotide-binding domain HDN1F_RS05050 PF13545 Crp-like helix-turn-helix domain HDN1F_RS05060 PF01820 D-ala D-ala ligase N-terminus HDN1F_RS05060 PF07478 D-ala D-ala ligase C-terminus HDN1F_RS05070 PF07690 Major Facilitator Superfamily HDN1F_RS05075 PF00892 EamA-like transporter family HDN1F_RS05090 PF00501 AMP-binding enzyme HDN1F_RS05110 PF00550 Phosphopantetheine attachment site HDN1F_RS05110 PF14765 Polyketide synthase dehydratase HDN1F_RS05110 PF00501 AMP-binding enzyme HDN1F_RS05110 PF02801 Beta-ketoacyl synthase, C-terminal domain HDN1F_RS05110 PF08659 KR domain HDN1F_RS05110 PF16197 Ketoacyl-synthetase C-terminal extension HDN1F_RS05110 PF00109 Beta-ketoacyl synthase, N-terminal domain HDN1F_RS05110 PF00668 Condensation domain HDN1F_RS05110 PF13193 AMP-binding enzyme C-terminal domain HDN1F_RS05160 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HDN1F_RS05160 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HDN1F_RS05160 PF00378 Enoyl-CoA hydratase/isomerase HDN1F_RS05165 PF00108 Thiolase, N-terminal domain HDN1F_RS05165 PF02803 Thiolase, C-terminal domain HDN1F_RS05180 PF02515 CoA-transferase family III HDN1F_RS05190 PF03795 YCII-related domain HDN1F_RS05195 PF04279 Intracellular septation protein A HDN1F_RS05205 PF02811 PHP domain HDN1F_RS05210 PF01300 Telomere recombination HDN1F_RS05215 PF02616 Segregation and condensation protein ScpA HDN1F_RS05220 PF04079 Segregation and condensation complex subunit ScpB HDN1F_RS05225 PF01479 S4 domain HDN1F_RS05225 PF00849 RNA pseudouridylate synthase HDN1F_RS05235 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_RS05240 PF00106 short chain dehydrogenase HDN1F_RS05245 PF00521 DNA gyrase/topoisomerase IV, subunit A HDN1F_RS05245 PF03989 DNA gyrase C-terminal domain, beta-propeller HDN1F_RS05250 PF00266 Aminotransferase class-V HDN1F_RS05255 PF00800 Prephenate dehydratase HDN1F_RS05255 PF01817 Chorismate mutase type II HDN1F_RS05255 PF01842 ACT domain HDN1F_RS05260 PF00155 Aminotransferase class I and II HDN1F_RS05265 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HDN1F_RS05270 PF02224 Cytidylate kinase HDN1F_RS05275 PF00575 S1 RNA binding domain HDN1F_RS05280 PF00106 short chain dehydrogenase HDN1F_RS05285 PF02321 Outer membrane efflux protein HDN1F_RS05295 PF11818 C-terminal domain of tail specific protease (DUF3340) HDN1F_RS05295 PF17804 Tail specific protease N-terminal domain HDN1F_RS05295 PF03572 Peptidase family S41 HDN1F_RS05295 PF00595 PDZ domain HDN1F_RS05320 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_RS05320 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_RS05320 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_RS05325 PF12833 Helix-turn-helix domain HDN1F_RS05325 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term HDN1F_RS05330 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_RS05330 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_RS05330 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_RS05335 PF00216 Bacterial DNA-binding protein HDN1F_RS05345 PF18073 Rubredoxin metal binding domain HDN1F_RS05350 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HDN1F_RS05360 PF05494 MlaC protein HDN1F_RS05365 PF00953 Glycosyl transferase family 4 HDN1F_RS05370 PF02397 Bacterial sugar transferase HDN1F_RS05375 PF02719 Polysaccharide biosynthesis protein HDN1F_RS05380 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HDN1F_RS05380 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HDN1F_RS05380 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HDN1F_RS05380 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HDN1F_RS05385 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HDN1F_RS05385 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HDN1F_RS05385 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HDN1F_RS05405 PF02151 UvrB/uvrC motif HDN1F_RS05405 PF12344 Ultra-violet resistance protein B HDN1F_RS05405 PF00271 Helicase conserved C-terminal domain HDN1F_RS05405 PF04851 Type III restriction enzyme, res subunit HDN1F_RS05405 PF17757 UvrB interaction domain HDN1F_RS05410 PF01370 NAD dependent epimerase/dehydratase family HDN1F_RS05420 PF05198 Translation initiation factor IF-3, N-terminal domain HDN1F_RS05420 PF00707 Translation initiation factor IF-3, C-terminal domain HDN1F_RS05425 PF01632 Ribosomal protein L35 HDN1F_RS05430 PF00453 Ribosomal protein L20 HDN1F_RS05435 PF01409 tRNA synthetases class II core domain (F) HDN1F_RS05435 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain HDN1F_RS05440 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain HDN1F_RS05440 PF03483 B3/4 domain HDN1F_RS05440 PF03147 Ferredoxin-fold anticodon binding domain HDN1F_RS05440 PF01588 Putative tRNA binding domain HDN1F_RS05440 PF03484 tRNA synthetase B5 domain HDN1F_RS05445 PF00216 Bacterial DNA-binding protein HDN1F_RS05450 PF13411 MerR HTH family regulatory protein HDN1F_RS05480 PF00144 Beta-lactamase HDN1F_RS05490 PF00501 AMP-binding enzyme HDN1F_RS05490 PF13193 AMP-binding enzyme C-terminal domain HDN1F_RS05495 PF00364 Biotin-requiring enzyme HDN1F_RS05495 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HDN1F_RS05495 PF00289 Biotin carboxylase, N-terminal domain HDN1F_RS05495 PF02785 Biotin carboxylase C-terminal domain HDN1F_RS05495 PF18140 Propionyl-coenzyme A carboxylase BT domain HDN1F_RS05500 PF00378 Enoyl-CoA hydratase/isomerase HDN1F_RS05505 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_RS05505 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_RS05505 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_RS05510 PF01039 Carboxyl transferase domain HDN1F_RS05510 PF17848 Acetyl-coA carboxylase zinc finger domain HDN1F_RS05530 PF00440 Bacterial regulatory proteins, tetR family HDN1F_RS05530 PF17932 Tetracyclin repressor-like, C-terminal domain HDN1F_RS05570 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HDN1F_RS05585 PF08546 Ketopantoate reductase PanE/ApbA C terminal HDN1F_RS05585 PF02558 Ketopantoate reductase PanE/ApbA HDN1F_RS05590 PF13378 Enolase C-terminal domain-like HDN1F_RS05595 PF01513 ATP-NAD kinase HDN1F_RS05600 PF00149 Calcineurin-like phosphoesterase HDN1F_RS05605 PF13188 PAS domain HDN1F_RS05605 PF03707 Bacterial signalling protein N terminal repeat HDN1F_RS05605 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_RS05605 PF00563 EAL domain HDN1F_RS05620 PF17432 Domain of unknown function (DUF3458_C) ARM repeats HDN1F_RS05620 PF11940 Domain of unknown function (DUF3458) Ig-like fold HDN1F_RS05620 PF01433 Peptidase family M1 domain HDN1F_RS05625 PF07044 Protein of unknown function (DUF1329) HDN1F_RS05635 PF03176 MMPL family HDN1F_RS05650 PF08448 PAS fold HDN1F_RS05650 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_RS05660 PF00378 Enoyl-CoA hydratase/isomerase HDN1F_RS05665 PF00106 short chain dehydrogenase HDN1F_RS05670 PF16363 GDP-mannose 4,6 dehydratase HDN1F_RS05675 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family HDN1F_RS05685 PF00171 Aldehyde dehydrogenase family HDN1F_RS05690 PF00732 GMC oxidoreductase HDN1F_RS05690 PF05199 GMC oxidoreductase HDN1F_RS05700 PF00067 Cytochrome P450 HDN1F_RS05715 PF00082 Subtilase family HDN1F_RS05720 PF00437 Type II/IV secretion system protein HDN1F_RS05730 PF02631 RecX family HDN1F_RS05740 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HDN1F_RS05740 PF01411 tRNA synthetases class II (A) HDN1F_RS05740 PF02272 DHHA1 domain HDN1F_RS05745 PF01842 ACT domain HDN1F_RS05745 PF13840 ACT domain HDN1F_RS05745 PF00696 Amino acid kinase family HDN1F_RS05750 PF02599 Global regulator protein family HDN1F_RS05785 PF00313 'Cold-shock' DNA-binding domain HDN1F_RS05800 PF00762 Ferrochelatase HDN1F_RS05805 PF00578 AhpC/TSA family HDN1F_RS05810 PF01694 Rhomboid family HDN1F_RS05810 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease HDN1F_RS05815 PF04231 Endonuclease I HDN1F_RS05865 PF01584 CheW-like domain HDN1F_RS05865 PF00072 Response regulator receiver domain HDN1F_RS05870 PF01739 CheR methyltransferase, SAM binding domain HDN1F_RS05870 PF03705 CheR methyltransferase, all-alpha domain HDN1F_RS05875 PF00460 Flagella basal body rod protein HDN1F_RS05880 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HDN1F_RS05880 PF00460 Flagella basal body rod protein HDN1F_RS05885 PF03963 Flagellar hook capping protein - N-terminal region HDN1F_RS05890 PF07559 Flagellar basal body protein FlaE HDN1F_RS05890 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HDN1F_RS05890 PF00460 Flagella basal body rod protein HDN1F_RS05910 PF07733 Bacterial DNA polymerase III alpha NTPase domain HDN1F_RS05910 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HDN1F_RS05910 PF00929 Exonuclease HDN1F_RS05910 PF02811 PHP domain HDN1F_RS05910 PF14579 Helix-hairpin-helix motif HDN1F_RS05945 PF00665 Integrase core domain HDN1F_RS05965 PF02384 N-6 DNA Methylase HDN1F_RS05965 PF12161 HsdM N-terminal domain HDN1F_RS06035 PF12561 ToxR activated gene A lipoprotein domain HDN1F_RS06035 PF00041 Fibronectin type III domain HDN1F_RS06045 PF00881 Nitroreductase family HDN1F_RS06060 PF00378 Enoyl-CoA hydratase/isomerase HDN1F_RS06075 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain HDN1F_RS06075 PF06974 Protein of unknown function (DUF1298) HDN1F_RS06080 PF00501 AMP-binding enzyme HDN1F_RS06080 PF13193 AMP-binding enzyme C-terminal domain HDN1F_RS06085 PF00586 AIR synthase related protein, N-terminal domain HDN1F_RS06085 PF02769 AIR synthase related protein, C-terminal domain HDN1F_RS06090 PF07732 Multicopper oxidase HDN1F_RS06100 PF13091 PLD-like domain HDN1F_RS06100 PF13396 Phospholipase_D-nuclease N-terminal HDN1F_RS06110 PF02875 Mur ligase family, glutamate ligase domain HDN1F_RS06110 PF08245 Mur ligase middle domain HDN1F_RS06110 PF08443 RimK-like ATP-grasp domain HDN1F_RS06130 PF00403 Heavy-metal-associated domain HDN1F_RS06140 PF13746 4Fe-4S dicluster domain HDN1F_RS06140 PF12801 4Fe-4S binding domain HDN1F_RS06140 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase HDN1F_RS06145 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP HDN1F_RS06145 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HDN1F_RS06160 PF00115 Cytochrome C and Quinol oxidase polypeptide I HDN1F_RS06170 PF01728 FtsJ-like methyltransferase HDN1F_RS06170 PF18125 RlmM ferredoxin-like domain HDN1F_RS06175 PF07690 Major Facilitator Superfamily HDN1F_RS06180 PF01206 Sulfurtransferase TusA HDN1F_RS06190 PF06628 Catalase-related immune-responsive HDN1F_RS06190 PF00199 Catalase HDN1F_RS06200 PF05947 Type VI secretion system, TssF HDN1F_RS06245 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath HDN1F_RS06315 PF01740 STAS domain HDN1F_RS06315 PF00916 Sulfate permease family HDN1F_RS06340 PF03350 Uncharacterized protein family, UPF0114 HDN1F_RS06350 PF01554 MatE HDN1F_RS06355 PF01272 Transcription elongation factor, GreA/GreB, C-term HDN1F_RS06355 PF03449 Transcription elongation factor, N-terminal HDN1F_RS06365 PF03707 Bacterial signalling protein N terminal repeat HDN1F_RS06365 PF00563 EAL domain HDN1F_RS06365 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_RS06370 PF00440 Bacterial regulatory proteins, tetR family HDN1F_RS06380 PF00144 Beta-lactamase HDN1F_RS06395 PF00211 Adenylate and Guanylate cyclase catalytic domain HDN1F_RS06395 PF00672 HAMP domain HDN1F_RS06410 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HDN1F_RS06410 PF00460 Flagella basal body rod protein HDN1F_RS06415 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HDN1F_RS06415 PF00460 Flagella basal body rod protein HDN1F_RS06420 PF02107 Flagellar L-ring protein HDN1F_RS06425 PF02119 Flagellar P-ring protein HDN1F_RS06430 PF10135 Rod binding protein HDN1F_RS06430 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HDN1F_RS06435 PF07196 Flagellin hook IN motif HDN1F_RS06435 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HDN1F_RS06445 PF00669 Bacterial flagellin N-terminal helical region HDN1F_RS06445 PF00700 Bacterial flagellin C-terminal helical region HDN1F_RS06445 PF08884 Flagellin D3 domain HDN1F_RS06460 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_RS06460 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_RS06460 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_RS06465 PF00501 AMP-binding enzyme HDN1F_RS06465 PF13193 AMP-binding enzyme C-terminal domain HDN1F_RS06480 PF00881 Nitroreductase family HDN1F_RS06495 PF07733 Bacterial DNA polymerase III alpha NTPase domain HDN1F_RS06495 PF01336 OB-fold nucleic acid binding domain HDN1F_RS06495 PF02811 PHP domain HDN1F_RS06495 PF14579 Helix-hairpin-helix motif HDN1F_RS06495 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HDN1F_RS06510 PF01384 Phosphate transporter family HDN1F_RS06515 PF00672 HAMP domain HDN1F_RS06515 PF05227 CHASE3 domain HDN1F_RS06515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HDN1F_RS06535 PF03706 Lysylphosphatidylglycerol synthase TM region HDN1F_RS06535 PF09924 Uncharacterised conserved protein (DUF2156) HDN1F_RS06545 PF04349 Periplasmic glucan biosynthesis protein, MdoG HDN1F_RS06550 PF04349 Periplasmic glucan biosynthesis protein, MdoG HDN1F_RS06560 PF00535 Glycosyl transferase family 2 HDN1F_RS06570 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain HDN1F_RS06570 PF10996 Beta-Casp domain HDN1F_RS06570 PF00753 Metallo-beta-lactamase superfamily HDN1F_RS06580 PF00582 Universal stress protein family HDN1F_RS06595 PF01131 DNA topoisomerase HDN1F_RS06595 PF01751 Toprim domain HDN1F_RS06595 PF01396 Topoisomerase DNA binding C4 zinc finger HDN1F_RS06595 PF08272 Topoisomerase I zinc-ribbon-like HDN1F_RS06605 PF01726 LexA DNA binding domain HDN1F_RS06605 PF00717 Peptidase S24-like HDN1F_RS06620 PF00933 Glycosyl hydrolase family 3 N terminal domain HDN1F_RS06625 PF00156 Phosphoribosyl transferase domain HDN1F_RS06635 PF00270 DEAD/DEAH box helicase HDN1F_RS06635 PF17757 UvrB interaction domain HDN1F_RS06635 PF02559 CarD-like/TRCF domain HDN1F_RS06635 PF03461 TRCF domain HDN1F_RS06635 PF00271 Helicase conserved C-terminal domain HDN1F_RS06645 PF00085 Thioredoxin HDN1F_RS06655 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_RS06655 PF13185 GAF domain HDN1F_RS06660 PF02146 Sir2 family HDN1F_RS06675 PF00873 AcrB/AcrD/AcrF family HDN1F_RS06690 PF00350 Dynamin family HDN1F_RS06695 PF00350 Dynamin family HDN1F_RS06700 PF00350 Dynamin family HDN1F_RS06705 PF10417 C-terminal domain of 1-Cys peroxiredoxin HDN1F_RS06705 PF00578 AhpC/TSA family HDN1F_RS06710 PF13192 Thioredoxin domain HDN1F_RS06710 PF07992 Pyridine nucleotide-disulphide oxidoreductase HDN1F_RS06715 PF03942 DTW domain HDN1F_RS06720 PF00155 Aminotransferase class I and II HDN1F_RS06740 PF13419 Haloacid dehalogenase-like hydrolase HDN1F_RS06775 PF00196 Bacterial regulatory proteins, luxR family HDN1F_RS06775 PF00072 Response regulator receiver domain HDN1F_RS06780 PF07730 Histidine kinase HDN1F_RS06780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_RS06780 PF00672 HAMP domain HDN1F_RS06780 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term HDN1F_RS06785 PF07690 Major Facilitator Superfamily HDN1F_RS06790 PF07690 Major Facilitator Superfamily HDN1F_RS06795 PF00384 Molybdopterin oxidoreductase HDN1F_RS06795 PF14710 Respiratory nitrate reductase alpha N-terminal HDN1F_RS06795 PF01568 Molydopterin dinucleotide binding domain HDN1F_RS06800 PF13247 4Fe-4S dicluster domain HDN1F_RS06800 PF14711 Respiratory nitrate reductase beta C-terminal HDN1F_RS06805 PF02613 Nitrate reductase delta subunit HDN1F_RS06810 PF02665 Nitrate reductase gamma subunit HDN1F_RS06815 PF09312 SurA N-terminal domain HDN1F_RS06820 PF06463 Molybdenum Cofactor Synthesis C HDN1F_RS06820 PF04055 Radical SAM superfamily HDN1F_RS06825 PF00484 Carbonic anhydrase HDN1F_RS06830 PF00072 Response regulator receiver domain HDN1F_RS06830 PF00486 Transcriptional regulatory protein, C terminal HDN1F_RS06835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_RS06840 PF00072 Response regulator receiver domain HDN1F_RS06840 PF01627 Hpt domain HDN1F_RS06840 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HDN1F_RS06840 PF00672 HAMP domain HDN1F_RS06840 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_RS06840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_RS06850 PF18030 RimK PreATP-grasp domain HDN1F_RS06850 PF08443 RimK-like ATP-grasp domain HDN1F_RS06855 PF08443 RimK-like ATP-grasp domain HDN1F_RS06855 PF18030 RimK PreATP-grasp domain HDN1F_RS06860 PF00899 ThiF family HDN1F_RS06875 PF12833 Helix-turn-helix domain HDN1F_RS06875 PF02311 AraC-like ligand binding domain HDN1F_RS06880 PF02801 Beta-ketoacyl synthase, C-terminal domain HDN1F_RS06880 PF00109 Beta-ketoacyl synthase, N-terminal domain HDN1F_RS06885 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HDN1F_RS06885 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HDN1F_RS06910 PF00350 Dynamin family HDN1F_RS06930 PF00012 Hsp70 protein HDN1F_RS06935 PF00012 Hsp70 protein HDN1F_RS06940 PF00155 Aminotransferase class I and II HDN1F_RS06945 PF01641 SelR domain HDN1F_RS06950 PF00255 Glutathione peroxidase HDN1F_RS06965 PF03975 CheD chemotactic sensory transduction HDN1F_RS06970 PF00072 Response regulator receiver domain HDN1F_RS06970 PF01339 CheB methylesterase HDN1F_RS06975 PF03705 CheR methyltransferase, all-alpha domain HDN1F_RS06975 PF01739 CheR methyltransferase, SAM binding domain HDN1F_RS06980 PF00672 HAMP domain HDN1F_RS06980 PF02743 Cache domain HDN1F_RS06980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HDN1F_RS06985 PF02203 Tar ligand binding domain homologue HDN1F_RS06985 PF00672 HAMP domain HDN1F_RS06985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HDN1F_RS07005 PF00675 Insulinase (Peptidase family M16) HDN1F_RS07005 PF08367 Peptidase M16C associated HDN1F_RS07005 PF05193 Peptidase M16 inactive domain HDN1F_RS07010 PF00149 Calcineurin-like phosphoesterase HDN1F_RS07025 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) HDN1F_RS07030 PF01804 Penicillin amidase HDN1F_RS07035 PF02515 CoA-transferase family III HDN1F_RS07040 PF00027 Cyclic nucleotide-binding domain HDN1F_RS07040 PF13545 Crp-like helix-turn-helix domain HDN1F_RS07065 PF06733 DEAD_2 HDN1F_RS07065 PF00270 DEAD/DEAH box helicase HDN1F_RS07065 PF13307 Helicase C-terminal domain HDN1F_RS07070 PF00440 Bacterial regulatory proteins, tetR family HDN1F_RS07085 PF18030 RimK PreATP-grasp domain HDN1F_RS07085 PF08443 RimK-like ATP-grasp domain HDN1F_RS07090 PF18339 RapA N-terminal Tudor like domain 1 HDN1F_RS07090 PF00176 SNF2 family N-terminal domain HDN1F_RS07090 PF12137 RNA polymerase recycling family C-terminal HDN1F_RS07090 PF00271 Helicase conserved C-terminal domain HDN1F_RS07090 PF18337 RapA N-terminal Tudor like domain HDN1F_RS07095 PF00135 Carboxylesterase family HDN1F_RS07100 PF00348 Polyprenyl synthetase HDN1F_RS07105 PF01261 Xylose isomerase-like TIM barrel HDN1F_RS07110 PF02664 S-Ribosylhomocysteinase (LuxS) HDN1F_RS07115 PF01761 3-dehydroquinate synthase HDN1F_RS07140 PF06965 Na+/H+ antiporter 1 HDN1F_RS07150 PF13520 Amino acid permease HDN1F_RS07155 PF03109 ABC1 family HDN1F_RS07170 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HDN1F_RS07185 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin HDN1F_RS07190 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HDN1F_RS07190 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HDN1F_RS07195 PF00753 Metallo-beta-lactamase superfamily HDN1F_RS07195 PF16123 Hydroxyacylglutathione hydrolase C-terminus HDN1F_RS07205 PF00072 Response regulator receiver domain HDN1F_RS07205 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_RS07205 PF09308 LuxQ, periplasmic HDN1F_RS07205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_RS07235 PF00072 Response regulator receiver domain HDN1F_RS07235 PF00486 Transcriptional regulatory protein, C terminal HDN1F_RS07240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_RS07240 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_RS07240 PF00672 HAMP domain HDN1F_RS07270 PF08443 RimK-like ATP-grasp domain HDN1F_RS07270 PF18030 RimK PreATP-grasp domain HDN1F_RS07275 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HDN1F_RS07275 PF14572 Phosphoribosyl synthetase-associated domain HDN1F_RS07280 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain HDN1F_RS07280 PF00591 Glycosyl transferase family, a/b domain HDN1F_RS07280 PF02885 Glycosyl transferase family, helical bundle domain HDN1F_RS07290 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase HDN1F_RS07290 PF00034 Cytochrome c HDN1F_RS07290 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HDN1F_RS07300 PF03109 ABC1 family HDN1F_RS07305 PF00909 Ammonium Transporter Family HDN1F_RS07310 PF00543 Nitrogen regulatory protein P-II HDN1F_RS07320 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_RS07320 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_RS07320 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_RS07320 PF12806 Acetyl-CoA dehydrogenase C-terminal like HDN1F_RS07330 PF01230 HIT domain HDN1F_RS07335 PF05127 Helicase HDN1F_RS07335 PF13718 GNAT acetyltransferase 2 HDN1F_RS07335 PF17176 tRNA-binding domain HDN1F_RS07335 PF08351 Domain of unknown function (DUF1726) HDN1F_RS07340 PF02583 Metal-sensitive transcriptional repressor HDN1F_RS07345 PF02698 DUF218 domain HDN1F_RS07350 PF12795 Mechanosensitive ion channel porin domain HDN1F_RS07350 PF12794 Mechanosensitive ion channel inner membrane domain 1 HDN1F_RS07350 PF00924 Mechanosensitive ion channel HDN1F_RS07360 PF12806 Acetyl-CoA dehydrogenase C-terminal like HDN1F_RS07360 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_RS07360 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_RS07360 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_RS07370 PF02706 Chain length determinant protein HDN1F_RS07370 PF13807 G-rich domain on putative tyrosine kinase HDN1F_RS07370 PF13614 AAA domain HDN1F_RS07405 PF03808 Glycosyl transferase WecB/TagA/CpsF family HDN1F_RS07410 PF02397 Bacterial sugar transferase HDN1F_RS07415 PF04408 Helicase associated domain (HA2) HDN1F_RS07415 PF00270 DEAD/DEAH box helicase HDN1F_RS07415 PF00271 Helicase conserved C-terminal domain HDN1F_RS07415 PF08482 ATP-dependent helicase C-terminal HDN1F_RS07435 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_RS07435 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_RS07435 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_RS07450 PF04055 Radical SAM superfamily HDN1F_RS07455 PF00743 Flavin-binding monooxygenase-like HDN1F_RS07470 PF06974 Protein of unknown function (DUF1298) HDN1F_RS07470 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain HDN1F_RS07475 PF00893 Small Multidrug Resistance protein HDN1F_RS07480 PF03253 Urea transporter HDN1F_RS07495 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_RS07495 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_RS07495 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_RS07500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_RS07500 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_RS07500 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_RS07510 PF16916 Dimerisation domain of Zinc Transporter HDN1F_RS07510 PF01545 Cation efflux family HDN1F_RS07515 PF00571 CBS domain HDN1F_RS07515 PF00478 IMP dehydrogenase / GMP reductase domain HDN1F_RS07520 PF01136 Peptidase family U32 HDN1F_RS07520 PF16325 Peptidase family U32 C-terminal domain HDN1F_RS07545 PF02154 Flagellar motor switch protein FliM HDN1F_RS07545 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HDN1F_RS07550 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HDN1F_RS07560 PF00813 FliP family HDN1F_RS07565 PF01313 Bacterial export proteins, family 3 HDN1F_RS07570 PF01311 Bacterial export proteins, family 1 HDN1F_RS07575 PF01312 FlhB HrpN YscU SpaS Family HDN1F_RS07580 PF00771 FHIPEP family HDN1F_RS07585 PF00448 SRP54-type protein, GTPase domain HDN1F_RS07590 PF10609 NUBPL iron-transfer P-loop NTPase HDN1F_RS07595 PF04539 Sigma-70 region 3 HDN1F_RS07595 PF04545 Sigma-70, region 4 HDN1F_RS07595 PF04542 Sigma-70 region 2 HDN1F_RS07600 PF00072 Response regulator receiver domain HDN1F_RS07605 PF04344 Chemotaxis phosphatase, CheZ HDN1F_RS07610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_RS07610 PF02895 Signal transducing histidine kinase, homodimeric domain HDN1F_RS07610 PF00072 Response regulator receiver domain HDN1F_RS07610 PF01627 Hpt domain HDN1F_RS07610 PF01584 CheW-like domain HDN1F_RS07615 PF00072 Response regulator receiver domain HDN1F_RS07615 PF01339 CheB methylesterase HDN1F_RS07620 PF01618 MotA/TolQ/ExbB proton channel family HDN1F_RS07625 PF13677 Membrane MotB of proton-channel complex MotA/MotB HDN1F_RS07625 PF00691 OmpA family HDN1F_RS07630 PF13614 AAA domain HDN1F_RS07640 PF01584 CheW-like domain HDN1F_RS07645 PF01584 CheW-like domain HDN1F_RS07655 PF01312 FlhB HrpN YscU SpaS Family HDN1F_RS07665 PF00005 ABC transporter HDN1F_RS07670 PF03379 CcmB protein HDN1F_RS07675 PF01578 Cytochrome C assembly protein HDN1F_RS07680 PF04995 Heme exporter protein D (CcmD) HDN1F_RS07685 PF03100 CcmE HDN1F_RS07690 PF08011 PD-(D/E)XK nuclease superfamily HDN1F_RS07690 PF09820 Predicted AAA-ATPase HDN1F_RS07705 PF09820 Predicted AAA-ATPase HDN1F_RS07705 PF08011 PD-(D/E)XK nuclease superfamily HDN1F_RS07715 PF00551 Formyl transferase HDN1F_RS07715 PF01842 ACT domain HDN1F_RS07720 PF02887 Pyruvate kinase, alpha/beta domain HDN1F_RS07720 PF00224 Pyruvate kinase, barrel domain HDN1F_RS07725 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HDN1F_RS07725 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HDN1F_RS07730 PF00005 ABC transporter HDN1F_RS07730 PF00664 ABC transporter transmembrane region HDN1F_RS07735 PF00005 ABC transporter HDN1F_RS07735 PF00664 ABC transporter transmembrane region HDN1F_RS07740 PF01026 TatD related DNase HDN1F_RS07750 PF01575 MaoC like domain HDN1F_RS07760 PF02321 Outer membrane efflux protein HDN1F_RS07770 PF00550 Phosphopantetheine attachment site HDN1F_RS07770 PF00550 Phosphopantetheine attachment site HDN1F_RS07770 PF00668 Condensation domain HDN1F_RS07770 PF00501 AMP-binding enzyme HDN1F_RS07770 PF13193 AMP-binding enzyme C-terminal domain HDN1F_RS07770 PF13193 AMP-binding enzyme C-terminal domain HDN1F_RS07770 PF00501 AMP-binding enzyme HDN1F_RS07770 PF00668 Condensation domain HDN1F_RS07775 PF00668 Condensation domain HDN1F_RS07775 PF13193 AMP-binding enzyme C-terminal domain HDN1F_RS07775 PF00550 Phosphopantetheine attachment site HDN1F_RS07775 PF00501 AMP-binding enzyme HDN1F_RS07780 PF00501 AMP-binding enzyme HDN1F_RS07780 PF07993 Male sterility protein HDN1F_RS07780 PF00668 Condensation domain HDN1F_RS07780 PF00550 Phosphopantetheine attachment site HDN1F_RS07780 PF13193 AMP-binding enzyme C-terminal domain HDN1F_RS07785 PF04851 Type III restriction enzyme, res subunit HDN1F_RS07785 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) HDN1F_RS07785 PF00271 Helicase conserved C-terminal domain HDN1F_RS07785 PF08463 EcoEI R protein C-terminal HDN1F_RS07790 PF02384 N-6 DNA Methylase HDN1F_RS07790 PF12161 HsdM N-terminal domain HDN1F_RS07795 PF17761 DUF1016 N-terminal domain HDN1F_RS07795 PF06250 YhcG PDDEXK nuclease domain HDN1F_RS07805 PF13193 AMP-binding enzyme C-terminal domain HDN1F_RS07805 PF00550 Phosphopantetheine attachment site HDN1F_RS07805 PF00668 Condensation domain HDN1F_RS07805 PF00501 AMP-binding enzyme HDN1F_RS07810 PF00550 Phosphopantetheine attachment site HDN1F_RS07810 PF13193 AMP-binding enzyme C-terminal domain HDN1F_RS07810 PF00501 AMP-binding enzyme HDN1F_RS07810 PF00668 Condensation domain HDN1F_RS07810 PF00975 Thioesterase domain HDN1F_RS07825 PF01381 Helix-turn-helix HDN1F_RS07845 PF03738 Glutathionylspermidine synthase preATP-grasp HDN1F_RS07855 PF00202 Aminotransferase class-III HDN1F_RS07885 PF00975 Thioesterase domain HDN1F_RS07895 PF00873 AcrB/AcrD/AcrF family HDN1F_RS07905 PF13173 AAA domain HDN1F_RS07905 PF13635 Domain of unknown function (DUF4143) HDN1F_RS07910 PF03793 PASTA domain HDN1F_RS07910 PF00069 Protein kinase domain HDN1F_RS07945 PF04972 BON domain HDN1F_RS07945 PF00263 Bacterial type II and III secretion system protein HDN1F_RS07945 PF13629 Pilus formation protein N terminal region HDN1F_RS07950 PF00437 Type II/IV secretion system protein HDN1F_RS07990 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HDN1F_RS07990 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HDN1F_RS07995 PF00285 Citrate synthase, C-terminal domain HDN1F_RS08005 PF16078 2-oxoglutarate dehydrogenase N-terminus HDN1F_RS08005 PF02779 Transketolase, pyrimidine binding domain HDN1F_RS08005 PF00676 Dehydrogenase E1 component HDN1F_RS08005 PF16870 2-oxoglutarate dehydrogenase C-terminal HDN1F_RS08010 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HDN1F_RS08010 PF02817 e3 binding domain HDN1F_RS08010 PF00364 Biotin-requiring enzyme HDN1F_RS08015 PF07992 Pyridine nucleotide-disulphide oxidoreductase HDN1F_RS08015 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HDN1F_RS08020 PF08442 ATP-grasp domain HDN1F_RS08020 PF00549 CoA-ligase HDN1F_RS08025 PF00549 CoA-ligase HDN1F_RS08025 PF02629 CoA binding domain HDN1F_RS08035 PF00849 RNA pseudouridylate synthase HDN1F_RS08040 PF00180 Isocitrate/isopropylmalate dehydrogenase HDN1F_RS08045 PF00313 'Cold-shock' DNA-binding domain HDN1F_RS08050 PF02617 ATP-dependent Clp protease adaptor protein ClpS HDN1F_RS08055 PF17871 AAA lid domain HDN1F_RS08055 PF07724 AAA domain (Cdc48 subfamily) HDN1F_RS08055 PF02861 Clp amino terminal domain, pathogenicity island component HDN1F_RS08055 PF00004 ATPase family associated with various cellular activities (AAA) HDN1F_RS08055 PF10431 C-terminal, D2-small domain, of ClpB protein HDN1F_RS08060 PF01176 Translation initiation factor 1A / IF-1 HDN1F_RS08065 PF04376 Arginine-tRNA-protein transferase, N terminus HDN1F_RS08065 PF04377 Arginine-tRNA-protein transferase, C terminus HDN1F_RS08070 PF03588 Leucyl/phenylalanyl-tRNA protein transferase HDN1F_RS08075 PF07992 Pyridine nucleotide-disulphide oxidoreductase HDN1F_RS08080 PF13491 4TM region of DNA translocase FtsK/SpoIIIE HDN1F_RS08080 PF01580 FtsK/SpoIIIE family HDN1F_RS08080 PF09397 Ftsk gamma domain HDN1F_RS08080 PF17854 FtsK alpha domain HDN1F_RS08085 PF03548 Outer membrane lipoprotein carrier protein LolA HDN1F_RS08090 PF12002 MgsA AAA+ ATPase C terminal HDN1F_RS08090 PF16193 AAA C-terminal domain HDN1F_RS08090 PF00004 ATPase family associated with various cellular activities (AAA) HDN1F_RS08095 PF02537 CrcB-like protein, Camphor Resistance (CrcB) HDN1F_RS08100 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HDN1F_RS08100 PF02403 Seryl-tRNA synthetase N-terminal domain HDN1F_RS08105 PF14824 Sirohaem biosynthesis protein central HDN1F_RS08105 PF10414 Sirohaem synthase dimerisation region HDN1F_RS08105 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HDN1F_RS08110 PF02743 Cache domain HDN1F_RS08110 PF00672 HAMP domain HDN1F_RS08110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HDN1F_RS08115 PF04358 DsrC like protein HDN1F_RS08130 PF02635 DsrE/DsrF-like family HDN1F_RS08150 PF00183 Hsp90 protein HDN1F_RS08155 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus HDN1F_RS08155 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus HDN1F_RS08170 PF00501 AMP-binding enzyme HDN1F_RS08180 PF00561 alpha/beta hydrolase fold HDN1F_RS08180 PF00364 Biotin-requiring enzyme HDN1F_RS08200 PF02310 B12 binding domain HDN1F_RS08200 PF01642 Methylmalonyl-CoA mutase HDN1F_RS08205 PF01575 MaoC like domain HDN1F_RS08210 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_RS08210 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_RS08210 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_RS08225 PF05175 Methyltransferase small domain HDN1F_RS08230 PF01264 Chorismate synthase HDN1F_RS08235 PF12832 MFS_1 like family HDN1F_RS08245 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH HDN1F_RS08255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HDN1F_RS08260 PF06865 Pyrimidine/purine nucleoside phosphorylase HDN1F_RS08270 PF00474 Sodium:solute symporter family HDN1F_RS08275 PF00582 Universal stress protein family HDN1F_RS08280 PF01381 Helix-turn-helix HDN1F_RS08285 PF05973 Phage derived protein Gp49-like (DUF891) HDN1F_RS08290 PF00330 Aconitase family (aconitate hydratase) HDN1F_RS08295 PF00694 Aconitase C-terminal domain HDN1F_RS08300 PF00180 Isocitrate/isopropylmalate dehydrogenase HDN1F_RS08305 PF01118 Semialdehyde dehydrogenase, NAD binding domain HDN1F_RS08305 PF02774 Semialdehyde dehydrogenase, dimerisation domain HDN1F_RS08315 PF00004 ATPase family associated with various cellular activities (AAA) HDN1F_RS08315 PF01434 Peptidase family M41 HDN1F_RS08315 PF17862 AAA+ lid domain HDN1F_RS08315 PF06480 FtsH Extracellular HDN1F_RS08320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HDN1F_RS08320 PF00672 HAMP domain HDN1F_RS08320 PF02743 Cache domain HDN1F_RS08325 PF01416 tRNA pseudouridine synthase HDN1F_RS08330 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase HDN1F_RS08335 PF00291 Pyridoxal-phosphate dependent enzyme HDN1F_RS08340 PF00290 Tryptophan synthase alpha chain HDN1F_RS08345 PF17848 Acetyl-coA carboxylase zinc finger domain HDN1F_RS08345 PF01039 Carboxyl transferase domain HDN1F_RS08350 PF08245 Mur ligase middle domain HDN1F_RS08350 PF02875 Mur ligase family, glutamate ligase domain HDN1F_RS08360 PF02674 Colicin V production protein HDN1F_RS08365 PF00156 Phosphoribosyl transferase domain HDN1F_RS08370 PF01053 Cys/Met metabolism PLP-dependent enzyme HDN1F_RS08375 PF17863 AAA lid domain HDN1F_RS08375 PF07726 ATPase family associated with various cellular activities (AAA) HDN1F_RS08385 PF01841 Transglutaminase-like superfamily HDN1F_RS08385 PF11992 Domain of unknown function (DUF3488) HDN1F_RS08385 PF13559 Domain of unknown function (DUF4129) HDN1F_RS08395 PF01040 UbiA prenyltransferase family HDN1F_RS08400 PF01565 FAD binding domain HDN1F_RS08400 PF04030 D-arabinono-1,4-lactone oxidase HDN1F_RS08405 PF00106 short chain dehydrogenase HDN1F_RS08410 PF00533 BRCA1 C Terminus (BRCT) domain HDN1F_RS08410 PF03120 NAD-dependent DNA ligase OB-fold domain HDN1F_RS08410 PF03119 NAD-dependent DNA ligase C4 zinc finger domain HDN1F_RS08410 PF12826 Helix-hairpin-helix motif HDN1F_RS08410 PF01653 NAD-dependent DNA ligase adenylation domain HDN1F_RS08420 PF02811 PHP domain HDN1F_RS08420 PF01336 OB-fold nucleic acid binding domain HDN1F_RS08420 PF00929 Exonuclease HDN1F_RS08420 PF14579 Helix-hairpin-helix motif HDN1F_RS08420 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HDN1F_RS08420 PF07733 Bacterial DNA polymerase III alpha NTPase domain HDN1F_RS08420 PF11490 DNA polymerase III polC-type N-terminus II HDN1F_RS08425 PF11791 Aconitate B N-terminal domain HDN1F_RS08425 PF06434 Aconitate hydratase 2 N-terminus HDN1F_RS08425 PF00330 Aconitase family (aconitate hydratase) HDN1F_RS08435 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) HDN1F_RS08440 PF00149 Calcineurin-like phosphoesterase HDN1F_RS08445 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HDN1F_RS08450 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HDN1F_RS08450 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HDN1F_RS08470 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HDN1F_RS08470 PF05698 Bacterial trigger factor protein (TF) C-terminus HDN1F_RS08470 PF05697 Bacterial trigger factor protein (TF) HDN1F_RS08475 PF00574 Clp protease HDN1F_RS08480 PF06689 ClpX C4-type zinc finger HDN1F_RS08480 PF07724 AAA domain (Cdc48 subfamily) HDN1F_RS08480 PF10431 C-terminal, D2-small domain, of ClpB protein HDN1F_RS08485 PF05362 Lon protease (S16) C-terminal proteolytic domain HDN1F_RS08485 PF02190 ATP-dependent protease La (LON) substrate-binding domain HDN1F_RS08485 PF00004 ATPase family associated with various cellular activities (AAA) HDN1F_RS08490 PF00216 Bacterial DNA-binding protein HDN1F_RS08505 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HDN1F_RS08505 PF00005 ABC transporter HDN1F_RS08510 PF12911 N-terminal TM domain of oligopeptide transport permease C HDN1F_RS08510 PF00528 Binding-protein-dependent transport system inner membrane component HDN1F_RS08515 PF00528 Binding-protein-dependent transport system inner membrane component HDN1F_RS08520 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HDN1F_RS08525 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HDN1F_RS08535 PF01464 Transglycosylase SLT domain HDN1F_RS08535 PF01476 LysM domain HDN1F_RS08540 PF16123 Hydroxyacylglutathione hydrolase C-terminus HDN1F_RS08540 PF00753 Metallo-beta-lactamase superfamily HDN1F_RS08545 PF01209 ubiE/COQ5 methyltransferase family HDN1F_RS08550 PF00075 RNase H HDN1F_RS08555 PF00929 Exonuclease HDN1F_RS08565 PF00293 NUDIX domain HDN1F_RS08565 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain HDN1F_RS08565 PF09297 NADH pyrophosphatase zinc ribbon domain HDN1F_RS08575 PF01343 Peptidase family S49 HDN1F_RS08575 PF08496 Peptidase family S49 N-terminal HDN1F_RS08580 PF02310 B12 binding domain HDN1F_RS08580 PF02965 Vitamin B12 dependent methionine synthase, activation domain HDN1F_RS08580 PF00809 Pterin binding enzyme HDN1F_RS08580 PF02574 Homocysteine S-methyltransferase HDN1F_RS08580 PF02607 B12 binding domain HDN1F_RS08585 PF01521 Iron-sulphur cluster biosynthesis HDN1F_RS08585 PF01106 NifU-like domain HDN1F_RS08590 PF00793 DAHP synthetase I family HDN1F_RS08610 PF00582 Universal stress protein family HDN1F_RS08615 PF03466 LysR substrate binding domain HDN1F_RS08615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HDN1F_RS08630 PF04715 Anthranilate synthase component I, N terminal region HDN1F_RS08630 PF00425 chorismate binding enzyme HDN1F_RS08635 PF03618 Kinase/pyrophosphorylase HDN1F_RS08640 PF02896 PEP-utilising enzyme, TIM barrel domain HDN1F_RS08640 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HDN1F_RS08640 PF00391 PEP-utilising enzyme, mobile domain HDN1F_RS08645 PF01502 Phosphoribosyl-AMP cyclohydrolase HDN1F_RS08655 PF00563 EAL domain HDN1F_RS08655 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_RS08655 PF08448 PAS fold HDN1F_RS08665 PF01926 50S ribosome-binding GTPase HDN1F_RS08665 PF10396 GTP-binding protein TrmE N-terminus HDN1F_RS08665 PF12631 MnmE helical domain HDN1F_RS08700 PF07549 SecD/SecF GG Motif HDN1F_RS08700 PF02355 Protein export membrane protein HDN1F_RS08705 PF04172 LrgB-like family HDN1F_RS08710 PF03788 LrgA family HDN1F_RS08715 PF01370 NAD dependent epimerase/dehydratase family HDN1F_RS08725 PF13488 Glycine zipper HDN1F_RS08725 PF00691 OmpA family HDN1F_RS08730 PF07992 Pyridine nucleotide-disulphide oxidoreductase HDN1F_RS08730 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HDN1F_RS08735 PF00211 Adenylate and Guanylate cyclase catalytic domain HDN1F_RS08750 PF13808 DDE_Tnp_1-associated HDN1F_RS08750 PF01609 Transposase DDE domain HDN1F_RS08780 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_RS08780 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_RS08780 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_RS08785 PF00106 short chain dehydrogenase HDN1F_RS08835 PF00999 Sodium/hydrogen exchanger family HDN1F_RS08835 PF02254 TrkA-N domain HDN1F_RS08855 PF13700 Domain of unknown function (DUF4158) HDN1F_RS08855 PF01526 Tn3 transposase DDE domain HDN1F_RS08910 PF01527 Transposase HDN1F_RS08915 PF00665 Integrase core domain HDN1F_RS08925 PF12728 Helix-turn-helix domain HDN1F_RS08960 PF00501 AMP-binding enzyme HDN1F_RS08960 PF13193 AMP-binding enzyme C-terminal domain HDN1F_RS08965 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_RS08965 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_RS08965 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_RS08970 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_RS08970 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_RS08970 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_RS08975 PF05199 GMC oxidoreductase HDN1F_RS08975 PF00732 GMC oxidoreductase HDN1F_RS08990 PF00106 short chain dehydrogenase HDN1F_RS08995 PF00743 Flavin-binding monooxygenase-like HDN1F_RS09005 PF13205 Bacterial Ig-like domain HDN1F_RS09010 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) HDN1F_RS09025 PF12833 Helix-turn-helix domain HDN1F_RS09025 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term HDN1F_RS09030 PF00111 2Fe-2S iron-sulfur cluster binding domain HDN1F_RS09035 PF00067 Cytochrome P450 HDN1F_RS09040 PF07992 Pyridine nucleotide-disulphide oxidoreductase HDN1F_RS09040 PF14759 Reductase C-terminal HDN1F_RS09045 PF00743 Flavin-binding monooxygenase-like HDN1F_RS09050 PF07859 alpha/beta hydrolase fold HDN1F_RS09055 PF00106 short chain dehydrogenase HDN1F_RS09065 PF01526 Tn3 transposase DDE domain HDN1F_RS09065 PF13700 Domain of unknown function (DUF4158) HDN1F_RS09070 PF13614 AAA domain HDN1F_RS09075 PF17762 HTH domain found in ParB protein HDN1F_RS09075 PF02195 ParB-like nuclease domain HDN1F_RS09140 PF04002 RadC-like JAB domain HDN1F_RS09160 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA HDN1F_RS09195 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HDN1F_RS09220 PF02796 Helix-turn-helix domain of resolvase HDN1F_RS09220 PF00239 Resolvase, N terminal domain HDN1F_RS09360 PF02899 Phage integrase, N-terminal SAM-like domain HDN1F_RS09360 PF00589 Phage integrase family HDN1F_RS09380 PF00294 pfkB family carbohydrate kinase HDN1F_RS09385 PF14814 Bifunctional transglycosylase second domain HDN1F_RS09385 PF00905 Penicillin binding protein transpeptidase domain HDN1F_RS09385 PF00912 Transglycosylase HDN1F_RS09395 PF00034 Cytochrome c HDN1F_RS09400 PF00115 Cytochrome C and Quinol oxidase polypeptide I HDN1F_RS09420 PF13520 Amino acid permease HDN1F_RS09425 PF00989 PAS fold HDN1F_RS09425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_RS09425 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_RS09435 PF04143 Sulphur transport HDN1F_RS09440 PF01206 Sulfurtransferase TusA HDN1F_RS09445 PF03466 LysR substrate binding domain HDN1F_RS09445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HDN1F_RS09450 PF01717 Cobalamin-independent synthase, Catalytic domain HDN1F_RS09450 PF08267 Cobalamin-independent synthase, N-terminal domain HDN1F_RS09455 PF01593 Flavin containing amine oxidoreductase HDN1F_RS09485 PF06071 Protein of unknown function (DUF933) HDN1F_RS09485 PF01926 50S ribosome-binding GTPase HDN1F_RS09490 PF01195 Peptidyl-tRNA hydrolase HDN1F_RS09495 PF01386 Ribosomal L25p family HDN1F_RS09495 PF14693 Ribosomal protein TL5, C-terminal domain HDN1F_RS09500 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HDN1F_RS09500 PF14572 Phosphoribosyl synthetase-associated domain HDN1F_RS09510 PF08544 GHMP kinases C terminal HDN1F_RS09510 PF00288 GHMP kinases N terminal domain HDN1F_RS09515 PF03550 Outer membrane lipoprotein LolB HDN1F_RS09545 PF01850 PIN domain HDN1F_RS09550 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain HDN1F_RS09550 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain HDN1F_RS09550 PF01488 Shikimate / quinate 5-dehydrogenase HDN1F_RS09555 PF00472 RF-1 domain HDN1F_RS09555 PF03462 PCRF domain HDN1F_RS09560 PF17827 PrmC N-terminal domain HDN1F_RS09560 PF05175 Methyltransferase small domain HDN1F_RS09565 PF00899 ThiF family HDN1F_RS09570 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 HDN1F_RS09575 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HDN1F_RS09580 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit HDN1F_RS09580 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit HDN1F_RS09590 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HDN1F_RS09590 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region HDN1F_RS09595 PF01568 Molydopterin dinucleotide binding domain HDN1F_RS09595 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region HDN1F_RS09595 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HDN1F_RS09595 PF00384 Molybdopterin oxidoreductase HDN1F_RS09600 PF00146 NADH dehydrogenase HDN1F_RS09605 PF12838 4Fe-4S dicluster domain HDN1F_RS09610 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 HDN1F_RS09615 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HDN1F_RS09620 PF00361 Proton-conducting membrane transporter HDN1F_RS09620 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HDN1F_RS09625 PF00361 Proton-conducting membrane transporter HDN1F_RS09630 PF00361 Proton-conducting membrane transporter HDN1F_RS09635 PF01852 START domain HDN1F_RS09640 PF00271 Helicase conserved C-terminal domain HDN1F_RS09640 PF09382 RQC domain HDN1F_RS09640 PF16124 RecQ zinc-binding HDN1F_RS09640 PF00570 HRDC domain HDN1F_RS09640 PF00270 DEAD/DEAH box helicase HDN1F_RS09645 PF08495 FIST N domain HDN1F_RS09645 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_RS09645 PF10442 FIST C domain HDN1F_RS09645 PF00563 EAL domain HDN1F_RS09655 PF04055 Radical SAM superfamily HDN1F_RS09660 PF09285 Elongation factor P, C-terminal HDN1F_RS09660 PF08207 Elongation factor P (EF-P) KOW-like domain HDN1F_RS09660 PF01132 Elongation factor P (EF-P) OB domain HDN1F_RS09665 PF00152 tRNA synthetases class II (D, K and N) HDN1F_RS09680 PF00089 Trypsin HDN1F_RS09685 PF02666 Phosphatidylserine decarboxylase HDN1F_RS09695 PF01618 MotA/TolQ/ExbB proton channel family HDN1F_RS09700 PF00691 OmpA family HDN1F_RS09700 PF13677 Membrane MotB of proton-channel complex MotA/MotB HDN1F_RS09705 PF03193 RsgA GTPase HDN1F_RS09710 PF00929 Exonuclease HDN1F_RS09715 PF03853 YjeF-related protein N-terminus HDN1F_RS09715 PF01256 Carbohydrate kinase HDN1F_RS09720 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE HDN1F_RS09725 PF01520 N-acetylmuramoyl-L-alanine amidase HDN1F_RS09725 PF11741 AMIN domain HDN1F_RS09730 PF01119 DNA mismatch repair protein, C-terminal domain HDN1F_RS09730 PF08676 MutL C terminal dimerisation domain HDN1F_RS09735 PF01293 Phosphoenolpyruvate carboxykinase HDN1F_RS09740 PF01430 Hsp33 protein HDN1F_RS09745 PF01479 S4 domain HDN1F_RS09750 PF13419 Haloacid dehalogenase-like hydrolase HDN1F_RS09755 PF00293 NUDIX domain HDN1F_RS09760 PF00459 Inositol monophosphatase family HDN1F_RS09785 PF03466 LysR substrate binding domain HDN1F_RS09785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HDN1F_RS09790 PF00171 Aldehyde dehydrogenase family HDN1F_RS09805 PF13439 Glycosyltransferase Family 4 HDN1F_RS09805 PF00534 Glycosyl transferases group 1 HDN1F_RS09810 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_RS09810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_RS09810 PF00989 PAS fold HDN1F_RS09815 PF00196 Bacterial regulatory proteins, luxR family HDN1F_RS09815 PF00072 Response regulator receiver domain HDN1F_RS09820 PF09078 CheY binding HDN1F_RS09820 PF01584 CheW-like domain HDN1F_RS09820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_RS09820 PF01627 Hpt domain HDN1F_RS09820 PF02895 Signal transducing histidine kinase, homodimeric domain HDN1F_RS09825 PF00672 HAMP domain HDN1F_RS09825 PF12729 Four helix bundle sensory module for signal transduction HDN1F_RS09825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HDN1F_RS09830 PF01584 CheW-like domain HDN1F_RS09840 PF04286 Protein of unknown function (DUF445) HDN1F_RS09855 PF01926 50S ribosome-binding GTPase HDN1F_RS09860 PF00034 Cytochrome c HDN1F_RS09865 PF01323 DSBA-like thioredoxin domain HDN1F_RS09875 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_RS09885 PF02515 CoA-transferase family III HDN1F_RS09890 PF04542 Sigma-70 region 2 HDN1F_RS09890 PF04545 Sigma-70, region 4 HDN1F_RS09890 PF00140 Sigma-70 factor, region 1.2 HDN1F_RS09905 PF09820 Predicted AAA-ATPase HDN1F_RS09905 PF08011 PD-(D/E)XK nuclease superfamily HDN1F_RS09920 PF09820 Predicted AAA-ATPase HDN1F_RS09920 PF08011 PD-(D/E)XK nuclease superfamily HDN1F_RS09960 PF05717 IS66 Orf2 like protein HDN1F_RS09965 PF13817 IS66 C-terminal element HDN1F_RS09965 PF13007 Transposase C of IS166 homeodomain HDN1F_RS09965 PF03050 Transposase IS66 family HDN1F_RS09965 PF13005 zinc-finger binding domain of transposase IS66 HDN1F_RS09975 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) HDN1F_RS09985 PF04030 D-arabinono-1,4-lactone oxidase HDN1F_RS09985 PF01565 FAD binding domain HDN1F_RS10000 PF00675 Insulinase (Peptidase family M16) HDN1F_RS10000 PF05193 Peptidase M16 inactive domain HDN1F_RS10005 PF00675 Insulinase (Peptidase family M16) HDN1F_RS10005 PF05193 Peptidase M16 inactive domain HDN1F_RS10015 PF00448 SRP54-type protein, GTPase domain HDN1F_RS10015 PF02881 SRP54-type protein, helical bundle domain HDN1F_RS10020 PF00005 ABC transporter HDN1F_RS10025 PF18075 FtsX extracellular domain HDN1F_RS10055 PF00145 C-5 cytosine-specific DNA methylase HDN1F_RS10065 PF07282 Putative transposase DNA-binding domain HDN1F_RS10065 PF01385 Probable transposase HDN1F_RS10065 PF12323 Helix-turn-helix domain HDN1F_RS10075 PF00069 Protein kinase domain HDN1F_RS10080 PF00271 Helicase conserved C-terminal domain HDN1F_RS10080 PF00270 DEAD/DEAH box helicase HDN1F_RS10080 PF17191 RecG wedge domain HDN1F_RS10085 PF03466 LysR substrate binding domain HDN1F_RS10085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HDN1F_RS10090 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HDN1F_RS10090 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HDN1F_RS10095 PF05170 AsmA family HDN1F_RS10100 PF00583 Acetyltransferase (GNAT) family HDN1F_RS10100 PF00696 Amino acid kinase family HDN1F_RS10110 PF14759 Reductase C-terminal HDN1F_RS10110 PF07992 Pyridine nucleotide-disulphide oxidoreductase HDN1F_RS10120 PF00111 2Fe-2S iron-sulfur cluster binding domain HDN1F_RS10125 PF00067 Cytochrome P450 HDN1F_RS10130 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term HDN1F_RS10130 PF12833 Helix-turn-helix domain HDN1F_RS10135 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_RS10135 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_RS10135 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_RS10140 PF13193 AMP-binding enzyme C-terminal domain HDN1F_RS10140 PF00501 AMP-binding enzyme HDN1F_RS10145 PF01039 Carboxyl transferase domain HDN1F_RS10150 PF00378 Enoyl-CoA hydratase/isomerase HDN1F_RS10155 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HDN1F_RS10155 PF00364 Biotin-requiring enzyme HDN1F_RS10155 PF00289 Biotin carboxylase, N-terminal domain HDN1F_RS10155 PF02785 Biotin carboxylase C-terminal domain HDN1F_RS10160 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_RS10160 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_RS10160 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_RS10195 PF00890 FAD binding domain HDN1F_RS10195 PF04205 FMN-binding domain HDN1F_RS10200 PF00501 AMP-binding enzyme HDN1F_RS10200 PF13193 AMP-binding enzyme C-terminal domain HDN1F_RS10225 PF01883 Iron-sulfur cluster assembly protein HDN1F_RS10230 PF00890 FAD binding domain HDN1F_RS10250 PF00501 AMP-binding enzyme HDN1F_RS10250 PF13193 AMP-binding enzyme C-terminal domain HDN1F_RS10250 PF16177 Acetyl-coenzyme A synthetase N-terminus HDN1F_RS10255 PF02569 Pantoate-beta-alanine ligase HDN1F_RS10260 PF02548 Ketopantoate hydroxymethyltransferase HDN1F_RS10265 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HDN1F_RS10270 PF12626 Polymerase A arginine-rich C-terminus HDN1F_RS10270 PF01743 Poly A polymerase head domain HDN1F_RS10270 PF12627 Probable RNA and SrmB- binding site of polymerase A HDN1F_RS10275 PF08011 PD-(D/E)XK nuclease superfamily HDN1F_RS10275 PF09820 Predicted AAA-ATPase HDN1F_RS10305 PF00384 Molybdopterin oxidoreductase HDN1F_RS10305 PF01568 Molydopterin dinucleotide binding domain HDN1F_RS10310 PF13247 4Fe-4S dicluster domain HDN1F_RS10325 PF00150 Cellulase (glycosyl hydrolase family 5) HDN1F_RS10325 PF00553 Cellulose binding domain HDN1F_RS10335 PF03050 Transposase IS66 family HDN1F_RS10335 PF13817 IS66 C-terminal element HDN1F_RS10335 PF13007 Transposase C of IS166 homeodomain HDN1F_RS10335 PF13005 zinc-finger binding domain of transposase IS66 HDN1F_RS10340 PF05717 IS66 Orf2 like protein HDN1F_RS10350 PF07194 P2 response regulator binding domain HDN1F_RS10350 PF01627 Hpt domain HDN1F_RS10350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_RS10350 PF02895 Signal transducing histidine kinase, homodimeric domain HDN1F_RS10350 PF01584 CheW-like domain HDN1F_RS10355 PF01243 Pyridoxamine 5'-phosphate oxidase HDN1F_RS10355 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region HDN1F_RS10365 PF01311 Bacterial export proteins, family 1 HDN1F_RS10370 PF01313 Bacterial export proteins, family 3 HDN1F_RS10375 PF00813 FliP family HDN1F_RS10380 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HDN1F_RS10385 PF00072 Response regulator receiver domain HDN1F_RS10385 PF00196 Bacterial regulatory proteins, luxR family HDN1F_RS10390 PF13493 Domain of unknown function (DUF4118) HDN1F_RS10390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_RS10390 PF00989 PAS fold HDN1F_RS10390 PF13426 PAS domain HDN1F_RS10390 PF08447 PAS fold HDN1F_RS10390 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_RS10395 PF00771 FHIPEP family HDN1F_RS10400 PF03958 Bacterial type II/III secretion system short domain HDN1F_RS10400 PF00263 Bacterial type II and III secretion system protein HDN1F_RS10420 PF01514 Secretory protein of YscJ/FliF family HDN1F_RS10435 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HDN1F_RS10435 PF18269 T3SS EscN ATPase C-terminal domain HDN1F_RS10435 PF02874 ATP synthase alpha/beta family, beta-barrel domain HDN1F_RS10455 PF00180 Isocitrate/isopropylmalate dehydrogenase HDN1F_RS10460 PF00484 Carbonic anhydrase HDN1F_RS10480 PF00579 tRNA synthetases class I (W and Y) HDN1F_RS10485 PF00115 Cytochrome C and Quinol oxidase polypeptide I HDN1F_RS10490 PF01814 Hemerythrin HHE cation binding domain HDN1F_RS10490 PF04405 Domain of Unknown function (DUF542) HDN1F_RS10495 PF02954 Bacterial regulatory protein, Fis family HDN1F_RS10495 PF00158 Sigma-54 interaction domain HDN1F_RS10510 PF06827 Zinc finger found in FPG and IleRS HDN1F_RS10510 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain HDN1F_RS10510 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain HDN1F_RS10520 PF02082 Transcriptional regulator HDN1F_RS10530 PF05175 Methyltransferase small domain HDN1F_RS10530 PF08468 Methyltransferase small domain N-terminal HDN1F_RS10535 PF01479 S4 domain HDN1F_RS10535 PF00849 RNA pseudouridylate synthase HDN1F_RS10555 PF00072 Response regulator receiver domain HDN1F_RS10570 PF03949 Malic enzyme, NAD binding domain HDN1F_RS10570 PF01515 Phosphate acetyl/butaryl transferase HDN1F_RS10570 PF00390 Malic enzyme, N-terminal domain HDN1F_RS10575 PF03741 Integral membrane protein TerC family HDN1F_RS10590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_RS10590 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_RS10590 PF01627 Hpt domain HDN1F_RS10590 PF00989 PAS fold HDN1F_RS10590 PF00072 Response regulator receiver domain HDN1F_RS10590 PF00497 Bacterial extracellular solute-binding proteins, family 3 HDN1F_RS10595 PF01627 Hpt domain HDN1F_RS10595 PF00072 Response regulator receiver domain HDN1F_RS10595 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_RS10595 PF00497 Bacterial extracellular solute-binding proteins, family 3 HDN1F_RS10595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_RS10600 PF01627 Hpt domain HDN1F_RS10600 PF00072 Response regulator receiver domain HDN1F_RS10600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_RS10600 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_RS10600 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HDN1F_RS10600 PF00672 HAMP domain HDN1F_RS10605 PF00465 Iron-containing alcohol dehydrogenase HDN1F_RS10615 PF01329 Pterin 4 alpha carbinolamine dehydratase HDN1F_RS10620 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HDN1F_RS10630 PF02580 D-Tyr-tRNA(Tyr) deacylase HDN1F_RS10635 PF04293 SpoVR like protein HDN1F_RS10640 PF04285 Protein of unknown function (DUF444) HDN1F_RS10645 PF08298 PrkA AAA domain HDN1F_RS10645 PF06798 PrkA serine protein kinase C-terminal domain HDN1F_RS10650 PF00149 Calcineurin-like phosphoesterase HDN1F_RS10655 PF04379 ApaG domain HDN1F_RS10660 PF00398 Ribosomal RNA adenine dimethylase HDN1F_RS10665 PF04166 Pyridoxal phosphate biosynthetic protein PdxA HDN1F_RS10670 PF00639 PPIC-type PPIASE domain HDN1F_RS10670 PF09312 SurA N-terminal domain HDN1F_RS10675 PF04453 LPS transport system D HDN1F_RS10675 PF03968 OstA-like protein HDN1F_RS10680 PF01636 Phosphotransferase enzyme family HDN1F_RS10685 PF00483 Nucleotidyl transferase HDN1F_RS10690 PF00226 DnaJ domain HDN1F_RS10690 PF05099 Tellurite resistance protein TerB HDN1F_RS10700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HDN1F_RS10700 PF00672 HAMP domain HDN1F_RS10700 PF12729 Four helix bundle sensory module for signal transduction HDN1F_RS10740 PF03707 Bacterial signalling protein N terminal repeat HDN1F_RS10740 PF00563 EAL domain HDN1F_RS10740 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_RS10745 PF00834 Ribulose-phosphate 3 epimerase family HDN1F_RS10750 PF13419 Haloacid dehalogenase-like hydrolase HDN1F_RS10755 PF01323 DSBA-like thioredoxin domain HDN1F_RS10770 PF17761 DUF1016 N-terminal domain HDN1F_RS10770 PF06250 YhcG PDDEXK nuclease domain HDN1F_RS10780 PF10544 T5orf172 domain HDN1F_RS10790 PF16653 Saccharopine dehydrogenase C-terminal domain HDN1F_RS10790 PF03435 Saccharopine dehydrogenase NADP binding domain HDN1F_RS10795 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HDN1F_RS10805 PF00425 chorismate binding enzyme HDN1F_RS10805 PF04715 Anthranilate synthase component I, N terminal region HDN1F_RS10810 PF00117 Glutamine amidotransferase class-I HDN1F_RS10815 PF00591 Glycosyl transferase family, a/b domain HDN1F_RS10815 PF02885 Glycosyl transferase family, helical bundle domain HDN1F_RS10820 PF00218 Indole-3-glycerol phosphate synthase HDN1F_RS10825 PF02798 Glutathione S-transferase, N-terminal domain HDN1F_RS10825 PF00043 Glutathione S-transferase, C-terminal domain HDN1F_RS10835 PF17209 Hfq protein HDN1F_RS10840 PF13167 GTP-binding GTPase N-terminal HDN1F_RS10840 PF01926 50S ribosome-binding GTPase HDN1F_RS10840 PF16360 GTP-binding GTPase Middle Region HDN1F_RS10845 PF12221 Bacterial membrane protein N terminal HDN1F_RS10845 PF01145 SPFH domain / Band 7 family HDN1F_RS10850 PF01145 SPFH domain / Band 7 family HDN1F_RS10860 PF13393 Histidyl-tRNA synthetase HDN1F_RS10865 PF00709 Adenylosuccinate synthetase HDN1F_RS10880 PF07992 Pyridine nucleotide-disulphide oxidoreductase HDN1F_RS10880 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HDN1F_RS10890 PF02657 Fe-S metabolism associated domain HDN1F_RS10895 PF01883 Iron-sulfur cluster assembly protein HDN1F_RS10900 PF01521 Iron-sulphur cluster biosynthesis HDN1F_RS10905 PF00266 Aminotransferase class-V HDN1F_RS10915 PF00005 ABC transporter HDN1F_RS10920 PF01458 Uncharacterized protein family (UPF0051) HDN1F_RS10925 PF02082 Transcriptional regulator HDN1F_RS10945 PF01554 MatE HDN1F_RS10955 PF00873 AcrB/AcrD/AcrF family HDN1F_RS10960 PF13533 Biotin-lipoyl like HDN1F_RS10975 PF00175 Oxidoreductase NAD-binding domain HDN1F_RS10975 PF00970 Oxidoreductase FAD-binding domain HDN1F_RS11005 PF00487 Fatty acid desaturase HDN1F_RS11010 PF00175 Oxidoreductase NAD-binding domain HDN1F_RS11010 PF00111 2Fe-2S iron-sulfur cluster binding domain HDN1F_RS11010 PF00970 Oxidoreductase FAD-binding domain HDN1F_RS11015 PF00440 Bacterial regulatory proteins, tetR family HDN1F_RS11020 PF00529 HlyD membrane-fusion protein of T1SS HDN1F_RS11020 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HDN1F_RS11025 PF00873 AcrB/AcrD/AcrF family HDN1F_RS11035 PF00133 tRNA synthetases class I (I, L, M and V) HDN1F_RS11035 PF10458 Valyl tRNA synthetase tRNA binding arm HDN1F_RS11035 PF08264 Anticodon-binding domain of tRNA HDN1F_RS11055 PF02789 Cytosol aminopeptidase family, N-terminal domain HDN1F_RS11055 PF00883 Cytosol aminopeptidase family, catalytic domain HDN1F_RS11060 PF03739 Lipopolysaccharide export system permease LptF/LptG HDN1F_RS11065 PF03739 Lipopolysaccharide export system permease LptF/LptG HDN1F_RS11080 PF02547 Queuosine biosynthesis protein HDN1F_RS11085 PF01702 Queuine tRNA-ribosyltransferase HDN1F_RS11090 PF02699 Preprotein translocase subunit HDN1F_RS11100 PF04286 Protein of unknown function (DUF445) HDN1F_RS11110 PF00459 Inositol monophosphatase family HDN1F_RS11115 PF00588 SpoU rRNA Methylase family HDN1F_RS11120 PF00132 Bacterial transferase hexapeptide (six repeats) HDN1F_RS11125 PF02082 Transcriptional regulator HDN1F_RS11130 PF00266 Aminotransferase class-V HDN1F_RS11140 PF00334 Nucleoside diphosphate kinase HDN1F_RS11145 PF04055 Radical SAM superfamily HDN1F_RS11160 PF04551 GcpE protein HDN1F_RS11165 PF03129 Anticodon binding domain HDN1F_RS11165 PF13393 Histidyl-tRNA synthetase HDN1F_RS11170 PF09976 Tetratricopeptide repeat-like domain HDN1F_RS11175 PF13360 PQQ-like domain HDN1F_RS11180 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HDN1F_RS11180 PF01926 50S ribosome-binding GTPase HDN1F_RS11200 PF09820 Predicted AAA-ATPase HDN1F_RS11200 PF08011 PD-(D/E)XK nuclease superfamily HDN1F_RS11255 PF00082 Subtilase family HDN1F_RS11275 PF00176 SNF2 family N-terminal domain HDN1F_RS11275 PF00271 Helicase conserved C-terminal domain HDN1F_RS11280 PF00072 Response regulator receiver domain HDN1F_RS11280 PF00158 Sigma-54 interaction domain HDN1F_RS11300 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_RS11300 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_RS11300 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_RS11305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HDN1F_RS11305 PF03466 LysR substrate binding domain HDN1F_RS11310 PF00437 Type II/IV secretion system protein HDN1F_RS11310 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain HDN1F_RS11315 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_RS11315 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_RS11315 PF18158 Adaptive response protein AidB N-terminal domain HDN1F_RS11320 PF00478 IMP dehydrogenase / GMP reductase domain HDN1F_RS11320 PF00571 CBS domain HDN1F_RS11325 PF02540 NAD synthase HDN1F_RS11325 PF00958 GMP synthase C terminal domain HDN1F_RS11325 PF00117 Glutamine amidotransferase class-I HDN1F_RS11335 PF00270 DEAD/DEAH box helicase HDN1F_RS11335 PF17191 RecG wedge domain HDN1F_RS11335 PF13749 Putative ATP-dependent DNA helicase recG C-terminal HDN1F_RS11350 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system HDN1F_RS11370 PF08281 Sigma-70, region 4 HDN1F_RS11370 PF04542 Sigma-70 region 2 HDN1F_RS11380 PF00270 DEAD/DEAH box helicase HDN1F_RS11380 PF03880 DbpA RNA binding domain HDN1F_RS11380 PF00271 Helicase conserved C-terminal domain HDN1F_RS11390 PF01544 CorA-like Mg2+ transporter protein HDN1F_RS11395 PF14437 MafB19-like deaminase HDN1F_RS11405 PF01464 Transglycosylase SLT domain HDN1F_RS11405 PF00497 Bacterial extracellular solute-binding proteins, family 3 HDN1F_RS11410 PF02769 AIR synthase related protein, C-terminal domain HDN1F_RS11410 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain HDN1F_RS11410 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal HDN1F_RS11420 PF01784 NIF3 (NGG1p interacting factor 3) HDN1F_RS11425 PF09308 LuxQ, periplasmic HDN1F_RS11425 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_RS11425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_RS11425 PF00072 Response regulator receiver domain HDN1F_RS11440 PF00293 NUDIX domain HDN1F_RS11445 PF00132 Bacterial transferase hexapeptide (six repeats) HDN1F_RS11455 PF00571 CBS domain HDN1F_RS11455 PF03471 Transporter associated domain HDN1F_RS11455 PF01595 Cyclin M transmembrane N-terminal domain HDN1F_RS11460 PF01578 Cytochrome C assembly protein HDN1F_RS11465 PF02978 Signal peptide binding domain HDN1F_RS11465 PF02881 SRP54-type protein, helical bundle domain HDN1F_RS11465 PF00448 SRP54-type protein, GTPase domain HDN1F_RS11470 PF00886 Ribosomal protein S16 HDN1F_RS11475 PF05239 PRC-barrel domain HDN1F_RS11475 PF01782 RimM N-terminal domain HDN1F_RS11480 PF01746 tRNA (Guanine-1)-methyltransferase HDN1F_RS11485 PF01245 Ribosomal protein L19 HDN1F_RS11490 PF02899 Phage integrase, N-terminal SAM-like domain HDN1F_RS11490 PF00589 Phage integrase family HDN1F_RS11495 PF10411 Disulfide bond isomerase protein N-terminus HDN1F_RS11495 PF13098 Thioredoxin-like domain HDN1F_RS11500 PF03447 Homoserine dehydrogenase, NAD binding domain HDN1F_RS11500 PF00742 Homoserine dehydrogenase HDN1F_RS11500 PF01842 ACT domain HDN1F_RS11505 PF00291 Pyridoxal-phosphate dependent enzyme HDN1F_RS11510 PF02272 DHHA1 domain HDN1F_RS11510 PF01368 DHH family HDN1F_RS11510 PF17768 RecJ OB domain HDN1F_RS11515 PF04381 Putative exonuclease, RdgC HDN1F_RS11520 PF00472 RF-1 domain HDN1F_RS11520 PF03462 PCRF domain HDN1F_RS11525 PF01336 OB-fold nucleic acid binding domain HDN1F_RS11525 PF00152 tRNA synthetases class II (D, K and N) HDN1F_RS11535 PF03167 Uracil DNA glycosylase superfamily HDN1F_RS11540 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) HDN1F_RS11550 PF00171 Aldehyde dehydrogenase family HDN1F_RS11555 PF00378 Enoyl-CoA hydratase/isomerase HDN1F_RS11560 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HDN1F_RS11560 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HDN1F_RS11565 PF00881 Nitroreductase family HDN1F_RS11570 PF01757 Acyltransferase family HDN1F_RS11575 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term HDN1F_RS11575 PF12833 Helix-turn-helix domain HDN1F_RS11590 PF00989 PAS fold HDN1F_RS11590 PF11808 Phosphate regulon sensor protein PhoR HDN1F_RS11590 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_RS11590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_RS11595 PF00486 Transcriptional regulatory protein, C terminal HDN1F_RS11595 PF00072 Response regulator receiver domain HDN1F_RS11600 PF01895 PhoU domain HDN1F_RS11605 PF00005 ABC transporter HDN1F_RS11610 PF00528 Binding-protein-dependent transport system inner membrane component HDN1F_RS11615 PF00528 Binding-protein-dependent transport system inner membrane component HDN1F_RS11620 PF12849 PBP superfamily domain HDN1F_RS11630 PF07690 Major Facilitator Superfamily HDN1F_RS11635 PF00529 HlyD membrane-fusion protein of T1SS HDN1F_RS11635 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HDN1F_RS11640 PF01047 MarR family HDN1F_RS11645 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB HDN1F_RS11650 PF02696 Uncharacterized ACR, YdiU/UPF0061 family HDN1F_RS11660 PF13847 Methyltransferase domain HDN1F_RS11675 PF00106 short chain dehydrogenase HDN1F_RS11680 PF08240 Alcohol dehydrogenase GroES-like domain HDN1F_RS11680 PF00107 Zinc-binding dehydrogenase HDN1F_RS11715 PF00176 SNF2 family N-terminal domain HDN1F_RS11715 PF00271 Helicase conserved C-terminal domain HDN1F_RS11725 PF01555 DNA methylase HDN1F_RS11725 PF18273 Type III R-M EcoP15I C-terminal domain HDN1F_RS11730 PF04851 Type III restriction enzyme, res subunit HDN1F_RS11730 PF08774 VRR-NUC domain HDN1F_RS11755 PF02796 Helix-turn-helix domain of resolvase HDN1F_RS11755 PF00239 Resolvase, N terminal domain HDN1F_RS11780 PF01668 SmpB protein HDN1F_RS11785 PF03658 RnfH family Ubiquitin HDN1F_RS11795 PF01475 Ferric uptake regulator family HDN1F_RS11800 PF02463 RecF/RecN/SMC N terminal domain HDN1F_RS11830 PF04434 SWIM zinc finger HDN1F_RS11835 PF12419 SNF2 Helicase protein HDN1F_RS11835 PF00176 SNF2 family N-terminal domain HDN1F_RS11835 PF00271 Helicase conserved C-terminal domain HDN1F_RS11860 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding HDN1F_RS11860 PF01628 HrcA protein C terminal domain HDN1F_RS11865 PF01025 GrpE HDN1F_RS11870 PF00012 Hsp70 protein HDN1F_RS11875 PF01556 DnaJ C terminal domain HDN1F_RS11875 PF00226 DnaJ domain HDN1F_RS11875 PF00684 DnaJ central domain HDN1F_RS11880 PF05173 Dihydrodipicolinate reductase, C-terminus HDN1F_RS11880 PF01113 Dihydrodipicolinate reductase, N-terminus HDN1F_RS11890 PF00117 Glutamine amidotransferase class-I HDN1F_RS11890 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain HDN1F_RS11895 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HDN1F_RS11895 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HDN1F_RS11895 PF02142 MGS-like domain HDN1F_RS11900 PF01272 Transcription elongation factor, GreA/GreB, C-term HDN1F_RS11900 PF03449 Transcription elongation factor, N-terminal HDN1F_RS11910 PF17092 Penicillin-binding protein OB-like domain HDN1F_RS11910 PF00912 Transglycosylase HDN1F_RS11910 PF00905 Penicillin binding protein transpeptidase domain HDN1F_RS11915 PF11104 Type IV pilus assembly protein PilM; HDN1F_RS11920 PF05137 Fimbrial assembly protein (PilN) HDN1F_RS11925 PF04350 Pilus assembly protein, PilO HDN1F_RS11930 PF04351 Pilus assembly protein, PilP HDN1F_RS11935 PF11741 AMIN domain HDN1F_RS11935 PF03958 Bacterial type II/III secretion system short domain HDN1F_RS11935 PF00263 Bacterial type II and III secretion system protein HDN1F_RS11935 PF07660 Secretin and TonB N terminus short domain HDN1F_RS11940 PF01202 Shikimate kinase HDN1F_RS11945 PF01761 3-dehydroquinate synthase HDN1F_RS11955 PF01208 Uroporphyrinogen decarboxylase (URO-D) HDN1F_RS11970 PF05016 ParE toxin of type II toxin-antitoxin system, parDE HDN1F_RS11980 PF09335 SNARE associated Golgi protein HDN1F_RS12015 PF00902 Sec-independent protein translocase protein (TatC) HDN1F_RS12020 PF02416 mttA/Hcf106 family HDN1F_RS12025 PF02416 mttA/Hcf106 family HDN1F_RS12030 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase HDN1F_RS12035 PF01209 ubiE/COQ5 methyltransferase family HDN1F_RS12045 PF07724 AAA domain (Cdc48 subfamily) HDN1F_RS12045 PF00004 ATPase family associated with various cellular activities (AAA) HDN1F_RS12045 PF10431 C-terminal, D2-small domain, of ClpB protein HDN1F_RS12050 PF00227 Proteasome subunit HDN1F_RS12060 PF00750 tRNA synthetases class I (R) HDN1F_RS12060 PF05746 DALR anticodon binding domain HDN1F_RS12060 PF03485 Arginyl tRNA synthetase N terminal domain HDN1F_RS12090 PF18319 PriA DNA helicase Cys-rich region (CRR) domain HDN1F_RS12090 PF18074 Primosomal protein N C-terminal domain HDN1F_RS12090 PF17764 3′ DNA-binding domain (3′BD) HDN1F_RS12090 PF00271 Helicase conserved C-terminal domain HDN1F_RS12090 PF00270 DEAD/DEAH box helicase HDN1F_RS12100 PF06594 Haemolysin-type calcium binding protein related domain HDN1F_RS12100 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) HDN1F_RS12115 PF00005 ABC transporter HDN1F_RS12115 PF03412 Peptidase C39 family HDN1F_RS12115 PF00664 ABC transporter transmembrane region HDN1F_RS12120 PF13700 Domain of unknown function (DUF4158) HDN1F_RS12120 PF01526 Tn3 transposase DDE domain HDN1F_RS12140 PF17876 Cold shock domain HDN1F_RS12140 PF00575 S1 RNA binding domain HDN1F_RS12140 PF00773 RNB domain HDN1F_RS12140 PF08206 Ribonuclease B OB domain HDN1F_RS12140 PF08461 Ribonuclease R winged-helix domain HDN1F_RS12145 PF08032 RNA 2'-O ribose methyltransferase substrate binding HDN1F_RS12145 PF00588 SpoU rRNA Methylase family HDN1F_RS12150 PF09909 Uncharacterized protein conserved in bacteria (DUF2138) HDN1F_RS12155 PF06672 Protein of unknown function (DUF1175) HDN1F_RS12160 PF01835 MG2 domain HDN1F_RS12160 PF07703 Alpha-2-macroglobulin bait region domain HDN1F_RS12160 PF00207 Alpha-2-macroglobulin family HDN1F_RS12165 PF10062 Predicted secreted protein (DUF2300) HDN1F_RS12165 PF08486 Stage II sporulation protein HDN1F_RS12170 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) HDN1F_RS12175 PF01312 FlhB HrpN YscU SpaS Family HDN1F_RS12190 PF01250 Ribosomal protein S6 HDN1F_RS12195 PF00436 Single-strand binding protein family HDN1F_RS12200 PF01084 Ribosomal protein S18 HDN1F_RS12210 PF01281 Ribosomal protein L9, N-terminal domain HDN1F_RS12210 PF03948 Ribosomal protein L9, C-terminal domain HDN1F_RS12235 PF00873 AcrB/AcrD/AcrF family HDN1F_RS12240 PF03600 Citrate transporter HDN1F_RS12245 PF11973 NQRA C-terminal domain HDN1F_RS12245 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) HDN1F_RS12250 PF03116 NQR2, RnfD, RnfE family HDN1F_RS12255 PF04205 FMN-binding domain HDN1F_RS12260 PF02508 Rnf-Nqr subunit, membrane protein HDN1F_RS12265 PF02508 Rnf-Nqr subunit, membrane protein HDN1F_RS12270 PF00175 Oxidoreductase NAD-binding domain HDN1F_RS12270 PF00111 2Fe-2S iron-sulfur cluster binding domain HDN1F_RS12270 PF00970 Oxidoreductase FAD-binding domain HDN1F_RS12275 PF02424 ApbE family HDN1F_RS12290 PF03796 DnaB-like helicase C terminal domain HDN1F_RS12290 PF00772 DnaB-like helicase N terminal domain HDN1F_RS12295 PF01168 Alanine racemase, N-terminal domain HDN1F_RS12295 PF00842 Alanine racemase, C-terminal domain HDN1F_RS12305 PF18073 Rubredoxin metal binding domain HDN1F_RS12310 PF02687 FtsX-like permease family HDN1F_RS12310 PF12704 MacB-like periplasmic core domain HDN1F_RS12320 PF07238 PilZ domain HDN1F_RS12330 PF04403 Paraquat-inducible protein A HDN1F_RS12335 PF04403 Paraquat-inducible protein A HDN1F_RS12340 PF02470 MlaD protein HDN1F_RS12350 PF03023 Lipid II flippase MurJ HDN1F_RS12355 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HDN1F_RS12375 PF00582 Universal stress protein family HDN1F_RS12380 PF00999 Sodium/hydrogen exchanger family HDN1F_RS12380 PF02080 TrkA-C domain HDN1F_RS12380 PF02254 TrkA-N domain HDN1F_RS12390 PF01699 Sodium/calcium exchanger protein HDN1F_RS12405 PF13426 PAS domain HDN1F_RS12405 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_RS12405 PF00563 EAL domain HDN1F_RS12410 PF04542 Sigma-70 region 2 HDN1F_RS12410 PF08281 Sigma-70, region 4 HDN1F_RS12415 PF01227 GTP cyclohydrolase I HDN1F_RS12420 PF03169 OPT oligopeptide transporter protein HDN1F_RS12425 PF00082 Subtilase family HDN1F_RS12425 PF01483 Proprotein convertase P-domain HDN1F_RS12450 PF13416 Bacterial extracellular solute-binding protein HDN1F_RS12455 PF00528 Binding-protein-dependent transport system inner membrane component HDN1F_RS12460 PF08402 TOBE domain HDN1F_RS12460 PF00005 ABC transporter HDN1F_RS12465 PF13847 Methyltransferase domain HDN1F_RS12480 PF00005 ABC transporter HDN1F_RS12480 PF12848 ABC transporter HDN1F_RS12485 PF13635 Domain of unknown function (DUF4143) HDN1F_RS12485 PF13173 AAA domain HDN1F_RS12490 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) HDN1F_RS12495 PF01494 FAD binding domain HDN1F_RS12510 PF04241 Protein of unknown function (DUF423) HDN1F_RS12515 PF01541 GIY-YIG catalytic domain HDN1F_RS12520 PF00732 GMC oxidoreductase HDN1F_RS12520 PF05199 GMC oxidoreductase HDN1F_RS12545 PF13406 Transglycosylase SLT domain HDN1F_RS12555 PF01709 Transcriptional regulator HDN1F_RS12565 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HDN1F_RS12565 PF00672 HAMP domain HDN1F_RS12565 PF17200 Single Cache domain 2 HDN1F_RS12575 PF01619 Proline dehydrogenase HDN1F_RS12575 PF18327 Proline utilization A proline dehydrogenase N-terminal domain HDN1F_RS12575 PF14850 DNA-binding domain of Proline dehydrogenase HDN1F_RS12575 PF00171 Aldehyde dehydrogenase family HDN1F_RS12580 PF01053 Cys/Met metabolism PLP-dependent enzyme HDN1F_RS12585 PF00437 Type II/IV secretion system protein HDN1F_RS12585 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain HDN1F_RS12590 PF01757 Acyltransferase family HDN1F_RS12600 PF08335 GlnD PII-uridylyltransferase HDN1F_RS12600 PF03710 Glutamate-ammonia ligase adenylyltransferase HDN1F_RS12605 PF01627 Hpt domain HDN1F_RS12605 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_RS12605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_RS12605 PF00072 Response regulator receiver domain HDN1F_RS12615 PF01063 Amino-transferase class IV HDN1F_RS12625 PF00664 ABC transporter transmembrane region HDN1F_RS12625 PF00005 ABC transporter HDN1F_RS12655 PF00109 Beta-ketoacyl synthase, N-terminal domain HDN1F_RS12655 PF02801 Beta-ketoacyl synthase, C-terminal domain HDN1F_RS12670 PF02801 Beta-ketoacyl synthase, C-terminal domain HDN1F_RS12670 PF00109 Beta-ketoacyl synthase, N-terminal domain HDN1F_RS12695 PF00221 Aromatic amino acid lyase HDN1F_RS12705 PF00501 AMP-binding enzyme HDN1F_RS12705 PF13193 AMP-binding enzyme C-terminal domain HDN1F_RS12715 PF00550 Phosphopantetheine attachment site HDN1F_RS12720 PF00550 Phosphopantetheine attachment site HDN1F_RS12725 PF01553 Acyltransferase HDN1F_RS12735 PF00403 Heavy-metal-associated domain HDN1F_RS12755 PF03475 3-alpha domain HDN1F_RS12755 PF03473 MOSC domain HDN1F_RS12760 PF00034 Cytochrome c HDN1F_RS12765 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HDN1F_RS12770 PF01546 Peptidase family M20/M25/M40 HDN1F_RS12770 PF07687 Peptidase dimerisation domain HDN1F_RS12775 PF00561 alpha/beta hydrolase fold HDN1F_RS12795 PF07690 Major Facilitator Superfamily HDN1F_RS12800 PF00111 2Fe-2S iron-sulfur cluster binding domain HDN1F_RS12800 PF00970 Oxidoreductase FAD-binding domain HDN1F_RS12805 PF08534 Redoxin HDN1F_RS12810 PF00483 Nucleotidyl transferase HDN1F_RS12810 PF01050 Mannose-6-phosphate isomerase HDN1F_RS12815 PF13087 AAA domain HDN1F_RS12815 PF13195 Protein of unknown function (DUF4011) HDN1F_RS12815 PF13087 AAA domain HDN1F_RS12815 PF13086 AAA domain HDN1F_RS12815 PF13195 Protein of unknown function (DUF4011) HDN1F_RS12815 PF13086 AAA domain HDN1F_RS12820 PF00293 NUDIX domain HDN1F_RS12840 PF00535 Glycosyl transferase family 2 HDN1F_RS12850 PF00534 Glycosyl transferases group 1 HDN1F_RS12850 PF13439 Glycosyltransferase Family 4 HDN1F_RS12870 PF02397 Bacterial sugar transferase HDN1F_RS12890 PF07715 TonB-dependent Receptor Plug Domain HDN1F_RS12890 PF00593 TonB dependent receptor HDN1F_RS12905 PF00202 Aminotransferase class-III HDN1F_RS12910 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HDN1F_RS12910 PF01568 Molydopterin dinucleotide binding domain HDN1F_RS12910 PF04324 BFD-like [2Fe-2S] binding domain HDN1F_RS12910 PF00384 Molybdopterin oxidoreductase HDN1F_RS12915 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HDN1F_RS12915 PF18267 Rubredoxin NAD+ reductase C-terminal domain HDN1F_RS12915 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HDN1F_RS12915 PF04324 BFD-like [2Fe-2S] binding domain HDN1F_RS12915 PF07992 Pyridine nucleotide-disulphide oxidoreductase HDN1F_RS12925 PF07690 Major Facilitator Superfamily HDN1F_RS12935 PF08241 Methyltransferase domain HDN1F_RS12940 PF00672 HAMP domain HDN1F_RS12940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HDN1F_RS12955 PF00464 Serine hydroxymethyltransferase HDN1F_RS12960 PF03960 ArsC family HDN1F_RS12965 PF00999 Sodium/hydrogen exchanger family HDN1F_RS12980 PF04143 Sulphur transport HDN1F_RS12985 PF03477 ATP cone domain HDN1F_RS12990 PF01872 RibD C-terminal domain HDN1F_RS12990 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HDN1F_RS12995 PF00677 Lumazine binding domain HDN1F_RS13000 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HDN1F_RS13000 PF00925 GTP cyclohydrolase II HDN1F_RS13005 PF00885 6,7-dimethyl-8-ribityllumazine synthase HDN1F_RS13010 PF01029 NusB family HDN1F_RS13015 PF00586 AIR synthase related protein, N-terminal domain HDN1F_RS13015 PF02769 AIR synthase related protein, C-terminal domain HDN1F_RS13040 PF00768 D-alanyl-D-alanine carboxypeptidase HDN1F_RS13045 PF00226 DnaJ domain HDN1F_RS13045 PF01556 DnaJ C terminal domain HDN1F_RS13050 PF02233 NAD(P) transhydrogenase beta subunit HDN1F_RS13055 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch HDN1F_RS13060 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HDN1F_RS13060 PF05222 Alanine dehydrogenase/PNT, N-terminal domain HDN1F_RS13080 PF00884 Sulfatase HDN1F_RS13080 PF08019 Phosphoethanolamine transferase EptA/EptB HDN1F_RS13085 PF00884 Sulfatase HDN1F_RS13085 PF12411 Choline sulfatase enzyme C terminal HDN1F_RS13090 PF18719 ArlS sensor domain HDN1F_RS13090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_RS13090 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_RS13095 PF00072 Response regulator receiver domain HDN1F_RS13095 PF00486 Transcriptional regulatory protein, C terminal HDN1F_RS13100 PF00916 Sulfate permease family HDN1F_RS13100 PF01740 STAS domain HDN1F_RS13115 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase HDN1F_RS13120 PF00535 Glycosyl transferase family 2 HDN1F_RS13130 PF17862 AAA+ lid domain HDN1F_RS13130 PF06480 FtsH Extracellular HDN1F_RS13130 PF01434 Peptidase family M41 HDN1F_RS13130 PF00004 ATPase family associated with various cellular activities (AAA) HDN1F_RS13155 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_RS13155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_RS13155 PF09308 LuxQ, periplasmic HDN1F_RS13155 PF00072 Response regulator receiver domain HDN1F_RS13160 PF00672 HAMP domain HDN1F_RS13160 PF00211 Adenylate and Guanylate cyclase catalytic domain HDN1F_RS13170 PF01797 Transposase IS200 like HDN1F_RS13175 PF07282 Putative transposase DNA-binding domain HDN1F_RS13175 PF01385 Probable transposase HDN1F_RS13175 PF12323 Helix-turn-helix domain HDN1F_RS13180 PF00171 Aldehyde dehydrogenase family HDN1F_RS13185 PF03061 Thioesterase superfamily HDN1F_RS13190 PF00465 Iron-containing alcohol dehydrogenase HDN1F_RS13200 PF02780 Transketolase, C-terminal domain HDN1F_RS13200 PF02779 Transketolase, pyrimidine binding domain HDN1F_RS13200 PF13292 1-deoxy-D-xylulose-5-phosphate synthase HDN1F_RS13205 PF00348 Polyprenyl synthetase HDN1F_RS13210 PF16295 Tetracyclin repressor-like, C-terminal domain HDN1F_RS13210 PF00440 Bacterial regulatory proteins, tetR family HDN1F_RS13215 PF00691 OmpA family HDN1F_RS13215 PF13677 Membrane MotB of proton-channel complex MotA/MotB HDN1F_RS13220 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term HDN1F_RS13220 PF12833 Helix-turn-helix domain HDN1F_RS13235 PF01381 Helix-turn-helix HDN1F_RS13240 PF05973 Phage derived protein Gp49-like (DUF891) HDN1F_RS13255 PF02554 Carbon starvation protein CstA HDN1F_RS13255 PF13722 5TM C-terminal transporter carbon starvation CstA HDN1F_RS13260 PF04328 Selenoprotein, putative HDN1F_RS13265 PF01541 GIY-YIG catalytic domain HDN1F_RS13275 PF00593 TonB dependent receptor HDN1F_RS13275 PF07715 TonB-dependent Receptor Plug Domain HDN1F_RS13280 PF02514 CobN/Magnesium Chelatase HDN1F_RS13300 PF00871 Acetokinase family HDN1F_RS13305 PF01515 Phosphate acetyl/butaryl transferase HDN1F_RS13305 PF07085 DRTGG domain HDN1F_RS13310 PF03776 Septum formation topological specificity factor MinE HDN1F_RS13315 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HDN1F_RS13320 PF05209 Septum formation inhibitor MinC, N-terminal domain HDN1F_RS13320 PF03775 Septum formation inhibitor MinC, C-terminal domain HDN1F_RS13325 PF16363 GDP-mannose 4,6 dehydratase HDN1F_RS13340 PF00571 CBS domain HDN1F_RS13345 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 HDN1F_RS13350 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HDN1F_RS13355 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit HDN1F_RS13355 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit HDN1F_RS13365 PF10531 SLBB domain HDN1F_RS13365 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HDN1F_RS13365 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region HDN1F_RS13370 PF00384 Molybdopterin oxidoreductase HDN1F_RS13370 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region HDN1F_RS13370 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HDN1F_RS13375 PF00146 NADH dehydrogenase HDN1F_RS13380 PF12838 4Fe-4S dicluster domain HDN1F_RS13385 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 HDN1F_RS13390 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HDN1F_RS13395 PF00361 Proton-conducting membrane transporter HDN1F_RS13395 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HDN1F_RS13400 PF00361 Proton-conducting membrane transporter HDN1F_RS13405 PF00361 Proton-conducting membrane transporter HDN1F_RS13410 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP HDN1F_RS13410 PF12557 Cob(I)alamin adenosyltransferase N terminal HDN1F_RS13415 PF07685 CobB/CobQ-like glutamine amidotransferase domain HDN1F_RS13415 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HDN1F_RS13420 PF02570 Precorrin-8X methylmutase HDN1F_RS13425 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HDN1F_RS13430 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HDN1F_RS13435 PF02571 Precorrin-6x reductase CbiJ/CobK HDN1F_RS13440 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HDN1F_RS13450 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HDN1F_RS13455 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HDN1F_RS13475 PF00005 ABC transporter HDN1F_RS13480 PF01032 FecCD transport family HDN1F_RS13490 PF00593 TonB dependent receptor HDN1F_RS13490 PF07715 TonB-dependent Receptor Plug Domain HDN1F_RS13495 PF03060 Nitronate monooxygenase HDN1F_RS13500 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HDN1F_RS13500 PF02843 Phosphoribosylglycinamide synthetase, C domain HDN1F_RS13500 PF02844 Phosphoribosylglycinamide synthetase, N domain HDN1F_RS13505 PF01808 AICARFT/IMPCHase bienzyme HDN1F_RS13505 PF02142 MGS-like domain HDN1F_RS13510 PF09820 Predicted AAA-ATPase HDN1F_RS13510 PF08011 PD-(D/E)XK nuclease superfamily HDN1F_RS13515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HDN1F_RS13515 PF08447 PAS fold HDN1F_RS13520 PF08011 PD-(D/E)XK nuclease superfamily HDN1F_RS13520 PF09820 Predicted AAA-ATPase HDN1F_RS13530 PF05199 GMC oxidoreductase HDN1F_RS13530 PF00732 GMC oxidoreductase HDN1F_RS13555 PF08011 PD-(D/E)XK nuclease superfamily HDN1F_RS13555 PF09820 Predicted AAA-ATPase HDN1F_RS13570 PF01370 NAD dependent epimerase/dehydratase family HDN1F_RS13575 PF08421 Putative zinc binding domain HDN1F_RS13575 PF08484 C-methyltransferase C-terminal domain HDN1F_RS13580 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase HDN1F_RS13585 PF16363 GDP-mannose 4,6 dehydratase HDN1F_RS13590 PF00483 Nucleotidyl transferase HDN1F_RS13595 PF00691 OmpA family HDN1F_RS13595 PF00223 Photosystem I psaA/psaB protein HDN1F_RS13610 PF17200 Single Cache domain 2 HDN1F_RS13610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HDN1F_RS13610 PF00672 HAMP domain HDN1F_RS13615 PF02954 Bacterial regulatory protein, Fis family HDN1F_RS13620 PF01207 Dihydrouridine synthase (Dus) HDN1F_RS13645 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HDN1F_RS13645 PF00289 Biotin carboxylase, N-terminal domain HDN1F_RS13645 PF02785 Biotin carboxylase C-terminal domain HDN1F_RS13650 PF00364 Biotin-requiring enzyme HDN1F_RS13655 PF01220 Dehydroquinase class II HDN1F_RS13660 PF02683 Cytochrome C biogenesis protein transmembrane region HDN1F_RS13660 PF11412 Disulphide bond corrector protein DsbC HDN1F_RS13670 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_RS13670 PF13185 GAF domain HDN1F_RS13670 PF00563 EAL domain HDN1F_RS13680 PF00719 Inorganic pyrophosphatase HDN1F_RS13690 PF08245 Mur ligase middle domain HDN1F_RS13690 PF02875 Mur ligase family, glutamate ligase domain HDN1F_RS13690 PF01225 Mur ligase family, catalytic domain HDN1F_RS13710 PF00171 Aldehyde dehydrogenase family HDN1F_RS13720 PF03783 Curli production assembly/transport component CsgG HDN1F_RS13735 PF05643 Putative bacterial lipoprotein (DUF799) HDN1F_RS13750 PF03334 Na+/H+ antiporter subunit HDN1F_RS13755 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) HDN1F_RS13760 PF01899 Na+/H+ ion antiporter subunit HDN1F_RS13765 PF00361 Proton-conducting membrane transporter HDN1F_RS13770 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HDN1F_RS13775 PF13244 Domain of unknown function (DUF4040) HDN1F_RS13775 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter HDN1F_RS13775 PF00361 Proton-conducting membrane transporter HDN1F_RS13775 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HDN1F_RS13780 PF02690 Na+/Pi-cotransporter HDN1F_RS13785 PF00209 Sodium:neurotransmitter symporter family HDN1F_RS13790 PF03631 Virulence factor BrkB HDN1F_RS13795 PF09820 Predicted AAA-ATPase HDN1F_RS13795 PF08011 PD-(D/E)XK nuclease superfamily HDN1F_RS13800 PF08011 PD-(D/E)XK nuclease superfamily HDN1F_RS13800 PF09820 Predicted AAA-ATPase HDN1F_RS13815 PF09820 Predicted AAA-ATPase HDN1F_RS13815 PF08011 PD-(D/E)XK nuclease superfamily HDN1F_RS13820 PF07836 DmpG-like communication domain HDN1F_RS13820 PF00682 HMGL-like HDN1F_RS13825 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation HDN1F_RS13825 PF01118 Semialdehyde dehydrogenase, NAD binding domain HDN1F_RS13830 PF01557 Fumarylacetoacetate (FAA) hydrolase family HDN1F_RS13835 PF00561 alpha/beta hydrolase fold HDN1F_RS13845 PF08028 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_RS13845 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_RS13850 PF01613 Flavin reductase like domain HDN1F_RS13870 PF03595 Voltage-dependent anion channel HDN1F_RS13875 PF00072 Response regulator receiver domain HDN1F_RS13875 PF00196 Bacterial regulatory proteins, luxR family HDN1F_RS13880 PF07730 Histidine kinase HDN1F_RS13880 PF17200 Single Cache domain 2 HDN1F_RS13890 PF00115 Cytochrome C and Quinol oxidase polypeptide I HDN1F_RS13905 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP HDN1F_RS13905 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HDN1F_RS13920 PF00563 EAL domain HDN1F_RS13920 PF13188 PAS domain HDN1F_RS13920 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_RS13920 PF03707 Bacterial signalling protein N terminal repeat HDN1F_RS13940 PF11849 Domain of unknown function (DUF3369) HDN1F_RS13950 PF02163 Peptidase family M50 HDN1F_RS13960 PF06250 YhcG PDDEXK nuclease domain HDN1F_RS13960 PF17761 DUF1016 N-terminal domain HDN1F_RS13965 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HDN1F_RS13970 PF13193 AMP-binding enzyme C-terminal domain HDN1F_RS13970 PF00501 AMP-binding enzyme HDN1F_RS13975 PF01144 Coenzyme A transferase HDN1F_RS13995 PF03060 Nitronate monooxygenase HDN1F_RS14000 PF00378 Enoyl-CoA hydratase/isomerase HDN1F_RS14005 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_RS14005 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_RS14005 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_RS14010 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_RS14010 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_RS14010 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_RS14015 PF00108 Thiolase, N-terminal domain HDN1F_RS14015 PF02803 Thiolase, C-terminal domain HDN1F_RS14025 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_RS14025 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_RS14025 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_RS14030 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_RS14030 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_RS14030 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_RS14035 PF13593 SBF-like CPA transporter family (DUF4137) HDN1F_RS14040 PF04343 Protein of unknown function, DUF488 HDN1F_RS14045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HDN1F_RS14045 PF00672 HAMP domain HDN1F_RS14045 PF02743 Cache domain HDN1F_RS14050 PF03167 Uracil DNA glycosylase superfamily HDN1F_RS14060 PF04545 Sigma-70, region 4 HDN1F_RS14060 PF04542 Sigma-70 region 2 HDN1F_RS14060 PF04546 Sigma-70, non-essential region HDN1F_RS14060 PF03979 Sigma-70 factor, region 1.1 HDN1F_RS14060 PF00140 Sigma-70 factor, region 1.2 HDN1F_RS14060 PF04539 Sigma-70 region 3 HDN1F_RS14070 PF09424 Yqey-like protein HDN1F_RS14075 PF01165 Ribosomal protein S21 HDN1F_RS14080 PF00814 Glycoprotease family HDN1F_RS14085 PF02660 Glycerol-3-phosphate acyltransferase HDN1F_RS14090 PF02152 Dihydroneopterin aldolase HDN1F_RS14095 PF01227 GTP cyclohydrolase I HDN1F_RS14095 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HDN1F_RS14100 PF12627 Probable RNA and SrmB- binding site of polymerase A HDN1F_RS14100 PF01966 HD domain HDN1F_RS14100 PF01743 Poly A polymerase head domain HDN1F_RS14105 PF01209 ubiE/COQ5 methyltransferase family HDN1F_RS14115 PF00440 Bacterial regulatory proteins, tetR family HDN1F_RS14120 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain HDN1F_RS14120 PF06974 Protein of unknown function (DUF1298) HDN1F_RS14125 PF00106 short chain dehydrogenase HDN1F_RS14140 PF03109 ABC1 family HDN1F_RS14145 PF01553 Acyltransferase HDN1F_RS14150 PF01370 NAD dependent epimerase/dehydratase family HDN1F_RS14165 PF03109 ABC1 family HDN1F_RS14190 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_RS14190 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_RS14190 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_RS14195 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_RS14195 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_RS14195 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_RS14225 PF13677 Membrane MotB of proton-channel complex MotA/MotB HDN1F_RS14225 PF00691 OmpA family HDN1F_RS14255 PF02627 Carboxymuconolactone decarboxylase family HDN1F_RS14260 PF00270 DEAD/DEAH box helicase HDN1F_RS14260 PF17191 RecG wedge domain HDN1F_RS14260 PF13749 Putative ATP-dependent DNA helicase recG C-terminal HDN1F_RS14265 PF02899 Phage integrase, N-terminal SAM-like domain HDN1F_RS14265 PF00589 Phage integrase family HDN1F_RS14295 PF00543 Nitrogen regulatory protein P-II HDN1F_RS14305 PF17284 Spermidine synthase tetramerisation domain HDN1F_RS14310 PF17810 Arginine decarboxylase helical bundle domain HDN1F_RS14310 PF17944 Arginine decarboxylase C-terminal helical extension HDN1F_RS14310 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HDN1F_RS14320 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) HDN1F_RS14325 PF01964 Radical SAM ThiC family HDN1F_RS14325 PF13667 ThiC-associated domain HDN1F_RS14335 PF07690 Major Facilitator Superfamily HDN1F_RS14340 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HDN1F_RS14340 PF07685 CobB/CobQ-like glutamine amidotransferase domain HDN1F_RS14345 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HDN1F_RS14360 PF00166 Chaperonin 10 Kd subunit HDN1F_RS14365 PF00118 TCP-1/cpn60 chaperonin family HDN1F_RS14375 PF13188 PAS domain HDN1F_RS14375 PF00563 EAL domain HDN1F_RS14375 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_RS14375 PF03707 Bacterial signalling protein N terminal repeat HDN1F_RS14380 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_RS14380 PF00360 Phytochrome region HDN1F_RS14380 PF01590 GAF domain HDN1F_RS14380 PF00563 EAL domain HDN1F_RS14385 PF08335 GlnD PII-uridylyltransferase HDN1F_RS14385 PF01842 ACT domain HDN1F_RS14385 PF01966 HD domain HDN1F_RS14385 PF01909 Nucleotidyltransferase domain HDN1F_RS14390 PF00557 Metallopeptidase family M24 HDN1F_RS14395 PF00318 Ribosomal protein S2 HDN1F_RS14400 PF00889 Elongation factor TS HDN1F_RS14405 PF00696 Amino acid kinase family HDN1F_RS14410 PF01765 Ribosome recycling factor HDN1F_RS14415 PF01255 Putative undecaprenyl diphosphate synthase HDN1F_RS14425 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain HDN1F_RS14425 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase HDN1F_RS14425 PF13288 DXP reductoisomerase C-terminal domain HDN1F_RS14430 PF17820 PDZ domain HDN1F_RS14430 PF02163 Peptidase family M50 HDN1F_RS14435 PF01103 Surface antigen HDN1F_RS14435 PF07244 Surface antigen variable number repeat HDN1F_RS14440 PF03938 Outer membrane protein (OmpH-like) HDN1F_RS14445 PF00132 Bacterial transferase hexapeptide (six repeats) HDN1F_RS14445 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD HDN1F_RS14450 PF07977 FabA-like domain HDN1F_RS14455 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 HDN1F_RS14455 PF00132 Bacterial transferase hexapeptide (six repeats) HDN1F_RS14460 PF02684 Lipid-A-disaccharide synthetase HDN1F_RS14465 PF01351 Ribonuclease HII HDN1F_RS14470 PF14579 Helix-hairpin-helix motif HDN1F_RS14470 PF01336 OB-fold nucleic acid binding domain HDN1F_RS14470 PF02811 PHP domain HDN1F_RS14470 PF07733 Bacterial DNA polymerase III alpha NTPase domain HDN1F_RS14470 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HDN1F_RS14475 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit HDN1F_RS14480 PF01925 Sulfite exporter TauE/SafE HDN1F_RS14495 PF00109 Beta-ketoacyl synthase, N-terminal domain HDN1F_RS14495 PF02801 Beta-ketoacyl synthase, C-terminal domain HDN1F_RS14500 PF07977 FabA-like domain HDN1F_RS14505 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal HDN1F_RS14505 PF01578 Cytochrome C assembly protein HDN1F_RS14510 PF08534 Redoxin HDN1F_RS14515 PF03918 Cytochrome C biogenesis protein HDN1F_RS14530 PF05191 Adenylate kinase, active site lid HDN1F_RS14535 PF12804 MobA-like NTP transferase domain HDN1F_RS14540 PF00814 Glycoprotease family HDN1F_RS14550 PF04445 Putative SAM-dependent methyltransferase HDN1F_RS14555 PF01553 Acyltransferase HDN1F_RS14560 PF00005 ABC transporter HDN1F_RS14575 PF01171 PP-loop family HDN1F_RS14575 PF09179 TilS substrate binding domain HDN1F_RS14575 PF11734 TilS substrate C-terminal domain HDN1F_RS14580 PF00117 Glutamine amidotransferase class-I HDN1F_RS14580 PF06418 CTP synthase N-terminus HDN1F_RS14585 PF00793 DAHP synthetase I family HDN1F_RS14590 PF00113 Enolase, C-terminal TIM barrel domain HDN1F_RS14590 PF03952 Enolase, N-terminal domain HDN1F_RS14595 PF04977 Septum formation initiator HDN1F_RS14600 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase HDN1F_RS14605 PF02542 YgbB family HDN1F_RS14610 PF01142 tRNA pseudouridine synthase D (TruD) HDN1F_RS14620 PF01476 LysM domain HDN1F_RS14620 PF01551 Peptidase family M23 HDN1F_RS14625 PF00140 Sigma-70 factor, region 1.2 HDN1F_RS14625 PF04542 Sigma-70 region 2 HDN1F_RS14625 PF04545 Sigma-70, region 4 HDN1F_RS14625 PF04539 Sigma-70 region 3 HDN1F_RS14630 PF01494 FAD binding domain HDN1F_RS14635 PF07859 alpha/beta hydrolase fold HDN1F_RS14640 PF00117 Glutamine amidotransferase class-I HDN1F_RS14640 PF03352 Methyladenine glycosylase HDN1F_RS14640 PF13302 Acetyltransferase (GNAT) domain HDN1F_RS14640 PF13673 Acetyltransferase (GNAT) domain HDN1F_RS14640 PF00958 GMP synthase C terminal domain HDN1F_RS14650 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_RS14650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_RS14650 PF00072 Response regulator receiver domain HDN1F_RS14650 PF01627 Hpt domain HDN1F_RS14655 PF17946 RecC C-terminal domain HDN1F_RS14660 PF12705 PD-(D/E)XK nuclease superfamily HDN1F_RS14660 PF00580 UvrD/REP helicase N-terminal domain HDN1F_RS14660 PF13361 UvrD-like helicase C-terminal domain HDN1F_RS14665 PF13538 UvrD-like helicase C-terminal domain HDN1F_RS14670 PF01053 Cys/Met metabolism PLP-dependent enzyme HDN1F_RS14675 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_RS14675 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_RS14675 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_RS14680 PF01926 50S ribosome-binding GTPase HDN1F_RS14680 PF12631 MnmE helical domain HDN1F_RS14680 PF10396 GTP-binding protein TrmE N-terminus HDN1F_RS14695 PF07690 Major Facilitator Superfamily HDN1F_RS14700 PF01235 Sodium:alanine symporter family HDN1F_RS14710 PF01113 Dihydrodipicolinate reductase, N-terminus HDN1F_RS14710 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain HDN1F_RS14715 PF00106 short chain dehydrogenase HDN1F_RS14720 PF12833 Helix-turn-helix domain HDN1F_RS14720 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term HDN1F_RS14740 PF05036 Sporulation related domain HDN1F_RS14750 PF05728 Uncharacterised protein family (UPF0227) HDN1F_RS14755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_RS14755 PF00204 DNA gyrase B HDN1F_RS14755 PF01751 Toprim domain HDN1F_RS14755 PF00986 DNA gyrase B subunit, carboxyl terminus HDN1F_RS14795 PF00665 Integrase core domain HDN1F_RS14820 PF00069 Protein kinase domain HDN1F_RS14820 PF03793 PASTA domain HDN1F_RS14835 PF02384 N-6 DNA Methylase HDN1F_RS14835 PF12161 HsdM N-terminal domain HDN1F_RS14840 PF12728 Helix-turn-helix domain HDN1F_RS14860 PF00753 Metallo-beta-lactamase superfamily HDN1F_RS14865 PF00360 Phytochrome region HDN1F_RS14865 PF00563 EAL domain HDN1F_RS14865 PF01590 GAF domain HDN1F_RS14865 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_RS14875 PF01292 Prokaryotic cytochrome b561 HDN1F_RS14880 PF00672 HAMP domain HDN1F_RS14880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HDN1F_RS14880 PF02203 Tar ligand binding domain homologue HDN1F_RS14885 PF00561 alpha/beta hydrolase fold HDN1F_RS14885 PF00106 short chain dehydrogenase HDN1F_RS14890 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_RS14890 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_RS14890 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_RS14890 PF12806 Acetyl-CoA dehydrogenase C-terminal like HDN1F_RS14900 PF01553 Acyltransferase HDN1F_RS14905 PF00271 Helicase conserved C-terminal domain HDN1F_RS14905 PF00270 DEAD/DEAH box helicase HDN1F_RS14910 PF01435 Peptidase family M48 HDN1F_RS14915 PF04011 LemA family HDN1F_RS14925 PF02649 Type I GTP cyclohydrolase folE2 HDN1F_RS14930 PF00027 Cyclic nucleotide-binding domain HDN1F_RS14930 PF13545 Crp-like helix-turn-helix domain HDN1F_RS14935 PF02566 OsmC-like protein HDN1F_RS14940 PF02675 S-adenosylmethionine decarboxylase HDN1F_RS14945 PF00300 Histidine phosphatase superfamily (branch 1) HDN1F_RS14965 PF01323 DSBA-like thioredoxin domain HDN1F_RS14990 PF01227 GTP cyclohydrolase I HDN1F_RS15000 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HDN1F_RS15005 PF12704 MacB-like periplasmic core domain HDN1F_RS15005 PF00005 ABC transporter HDN1F_RS15005 PF02687 FtsX-like permease family HDN1F_RS15010 PF01593 Flavin containing amine oxidoreductase HDN1F_RS15015 PF01593 Flavin containing amine oxidoreductase HDN1F_RS15020 PF08241 Methyltransferase domain HDN1F_RS15025 PF00510 Cytochrome c oxidase subunit III HDN1F_RS15030 PF03626 Prokaryotic Cytochrome C oxidase subunit IV HDN1F_RS15045 PF07859 alpha/beta hydrolase fold HDN1F_RS15050 PF01497 Periplasmic binding protein HDN1F_RS15055 PF06974 Protein of unknown function (DUF1298) HDN1F_RS15055 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain HDN1F_RS15060 PF10119 Predicted methyltransferase regulatory domain HDN1F_RS15060 PF13847 Methyltransferase domain HDN1F_RS15065 PF00005 ABC transporter HDN1F_RS15070 PF01061 ABC-2 type transporter HDN1F_RS15075 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term HDN1F_RS15075 PF14489 QueF-like protein HDN1F_RS15080 PF03435 Saccharopine dehydrogenase NADP binding domain HDN1F_RS15090 PF02705 K+ potassium transporter HDN1F_RS15100 PF00211 Adenylate and Guanylate cyclase catalytic domain HDN1F_RS15110 PF13495 Phage integrase, N-terminal SAM-like domain HDN1F_RS15110 PF00589 Phage integrase family HDN1F_RS15120 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HDN1F_RS15160 PF05717 IS66 Orf2 like protein HDN1F_RS15165 PF03050 Transposase IS66 family HDN1F_RS15165 PF13007 Transposase C of IS166 homeodomain HDN1F_RS15165 PF13005 zinc-finger binding domain of transposase IS66 HDN1F_RS15165 PF13817 IS66 C-terminal element HDN1F_RS15190 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HDN1F_RS15195 PF13005 zinc-finger binding domain of transposase IS66 HDN1F_RS15195 PF13817 IS66 C-terminal element HDN1F_RS15195 PF13007 Transposase C of IS166 homeodomain HDN1F_RS15195 PF03050 Transposase IS66 family HDN1F_RS15200 PF05717 IS66 Orf2 like protein HDN1F_RS15245 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HDN1F_RS15315 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HDN1F_RS15360 PF01618 MotA/TolQ/ExbB proton channel family HDN1F_RS15380 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HDN1F_RS15380 PF11890 Domain of unknown function (DUF3410) HDN1F_RS15380 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HDN1F_RS15390 PF01435 Peptidase family M48 HDN1F_RS15395 PF00743 Flavin-binding monooxygenase-like HDN1F_RS15400 PF01266 FAD dependent oxidoreductase HDN1F_RS15405 PF03601 Conserved hypothetical protein 698 HDN1F_RS15410 PF03466 LysR substrate binding domain HDN1F_RS15410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HDN1F_RS15415 PF02463 RecF/RecN/SMC N terminal domain HDN1F_RS15425 PF00533 BRCA1 C Terminus (BRCT) domain HDN1F_RS15425 PF03120 NAD-dependent DNA ligase OB-fold domain HDN1F_RS15425 PF03119 NAD-dependent DNA ligase C4 zinc finger domain HDN1F_RS15425 PF12826 Helix-hairpin-helix motif HDN1F_RS15425 PF01653 NAD-dependent DNA ligase adenylation domain HDN1F_RS15435 PF05430 S-adenosyl-L-methionine-dependent methyltransferase HDN1F_RS15435 PF01266 FAD dependent oxidoreductase HDN1F_RS15450 PF05433 Glycine zipper 2TM domain HDN1F_RS15465 PF00108 Thiolase, N-terminal domain HDN1F_RS15465 PF02803 Thiolase, C-terminal domain HDN1F_RS15470 PF00378 Enoyl-CoA hydratase/isomerase HDN1F_RS15470 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HDN1F_RS15470 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HDN1F_RS15495 PF01882 Protein of unknown function DUF58 HDN1F_RS15500 PF17863 AAA lid domain HDN1F_RS15500 PF07726 ATPase family associated with various cellular activities (AAA) HDN1F_RS15515 PF04055 Radical SAM superfamily HDN1F_RS15515 PF06969 HemN C-terminal domain HDN1F_RS15540 PF00067 Cytochrome P450 HDN1F_RS15545 PF03239 Iron permease FTR1 family HDN1F_RS15550 PF00939 Sodium:sulfate symporter transmembrane region HDN1F_RS15555 PF06339 Ectoine synthase HDN1F_RS15560 PF00202 Aminotransferase class-III HDN1F_RS15565 PF00583 Acetyltransferase (GNAT) family HDN1F_RS15570 PF01047 MarR family HDN1F_RS15575 PF05199 GMC oxidoreductase HDN1F_RS15575 PF00732 GMC oxidoreductase HDN1F_RS15580 PF09995 Uncharacterized protein conserved in bacteria (DUF2236) HDN1F_RS15585 PF02673 Bacitracin resistance protein BacA HDN1F_RS15595 PF01070 FMN-dependent dehydrogenase HDN1F_RS15600 PF05088 Bacterial NAD-glutamate dehydrogenase HDN1F_RS15610 PF00155 Aminotransferase class I and II HDN1F_RS15615 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HDN1F_RS15615 PF07992 Pyridine nucleotide-disulphide oxidoreductase HDN1F_RS15620 PF04898 Glutamate synthase central domain HDN1F_RS15620 PF01493 GXGXG motif HDN1F_RS15620 PF00310 Glutamine amidotransferases class-II HDN1F_RS15620 PF01645 Conserved region in glutamate synthase HDN1F_RS15625 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH HDN1F_RS15640 PF02954 Bacterial regulatory protein, Fis family HDN1F_RS15640 PF00158 Sigma-54 interaction domain HDN1F_RS15640 PF00072 Response regulator receiver domain HDN1F_RS15645 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_RS15645 PF00989 PAS fold HDN1F_RS15645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_RS15650 PF00120 Glutamine synthetase, catalytic domain HDN1F_RS15650 PF03951 Glutamine synthetase, beta-Grasp domain HDN1F_RS15655 PF03884 DNA gyrase inhibitor YacG HDN1F_RS15660 PF01121 Dephospho-CoA kinase HDN1F_RS15665 PF01381 Helix-turn-helix HDN1F_RS15670 PF05973 Phage derived protein Gp49-like (DUF891) HDN1F_RS15675 PF06750 Bacterial Peptidase A24 N-terminal domain HDN1F_RS15675 PF01478 Type IV leader peptidase family HDN1F_RS15680 PF00482 Type II secretion system (T2SS), protein F HDN1F_RS15685 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain HDN1F_RS15685 PF00437 Type II/IV secretion system protein HDN1F_RS15690 PF07963 Prokaryotic N-terminal methylation motif HDN1F_RS15690 PF00114 Pilin (bacterial filament) HDN1F_RS15700 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system HDN1F_RS15705 PF01381 Helix-turn-helix HDN1F_RS15720 PF00535 Glycosyl transferase family 2 HDN1F_RS15755 PF00132 Bacterial transferase hexapeptide (six repeats) HDN1F_RS15755 PF12804 MobA-like NTP transferase domain HDN1F_RS15765 PF02350 UDP-N-acetylglucosamine 2-epimerase HDN1F_RS15775 PF13439 Glycosyltransferase Family 4 HDN1F_RS15775 PF00534 Glycosyl transferases group 1 HDN1F_RS15780 PF00270 DEAD/DEAH box helicase HDN1F_RS15780 PF13749 Putative ATP-dependent DNA helicase recG C-terminal HDN1F_RS15780 PF17191 RecG wedge domain HDN1F_RS15800 PF02661 Fic/DOC family HDN1F_RS15800 PF13784 Fic/DOC family N-terminal HDN1F_RS15805 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HDN1F_RS15820 PF03358 NADPH-dependent FMN reductase HDN1F_RS15850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HDN1F_RS15850 PF02743 Cache domain HDN1F_RS15850 PF00672 HAMP domain HDN1F_RS15855 PF00011 Hsp20/alpha crystallin family HDN1F_RS15870 PF00440 Bacterial regulatory proteins, tetR family HDN1F_RS15875 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HDN1F_RS15885 PF00005 ABC transporter HDN1F_RS15910 PF08011 PD-(D/E)XK nuclease superfamily HDN1F_RS15910 PF09820 Predicted AAA-ATPase HDN1F_RS15925 PF08011 PD-(D/E)XK nuclease superfamily HDN1F_RS15925 PF09820 Predicted AAA-ATPase HDN1F_RS15930 PF01850 PIN domain HDN1F_RS15935 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin HDN1F_RS15940 PF08011 PD-(D/E)XK nuclease superfamily HDN1F_RS15940 PF09820 Predicted AAA-ATPase HDN1F_RS15960 PF01180 Dihydroorotate dehydrogenase HDN1F_RS15975 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system HDN1F_RS15980 PF01170 Putative RNA methylase family UPF0020 HDN1F_RS15980 PF02926 THUMP domain HDN1F_RS15980 PF10672 S-adenosylmethionine-dependent methyltransferase HDN1F_RS16010 PF00669 Bacterial flagellin N-terminal helical region HDN1F_RS16010 PF00700 Bacterial flagellin C-terminal helical region HDN1F_RS16020 PF02465 Flagellar hook-associated protein 2 N-terminus HDN1F_RS16020 PF07195 Flagellar hook-associated protein 2 C-terminus HDN1F_RS16020 PF07196 Flagellin hook IN motif HDN1F_RS16035 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HDN1F_RS16045 PF02954 Bacterial regulatory protein, Fis family HDN1F_RS16045 PF06490 Flagellar regulatory protein FleQ HDN1F_RS16045 PF00158 Sigma-54 interaction domain HDN1F_RS16050 PF13188 PAS domain HDN1F_RS16050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_RS16050 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_RS16055 PF02954 Bacterial regulatory protein, Fis family HDN1F_RS16055 PF00158 Sigma-54 interaction domain HDN1F_RS16055 PF00072 Response regulator receiver domain HDN1F_RS16060 PF02049 Flagellar hook-basal body complex protein FliE HDN1F_RS16065 PF08345 Flagellar M-ring protein C-terminal HDN1F_RS16065 PF01514 Secretory protein of YscJ/FliF family HDN1F_RS16070 PF01706 FliG C-terminal domain HDN1F_RS16070 PF14841 FliG middle domain HDN1F_RS16070 PF14842 FliG N-terminal domain HDN1F_RS16080 PF18269 T3SS EscN ATPase C-terminal domain HDN1F_RS16080 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HDN1F_RS16090 PF00072 Response regulator receiver domain HDN1F_RS16095 PF03975 CheD chemotactic sensory transduction HDN1F_RS16105 PF13466 STAS domain HDN1F_RS16110 PF00072 Response regulator receiver domain HDN1F_RS16110 PF00486 Transcriptional regulatory protein, C terminal HDN1F_RS16160 PF01883 Iron-sulfur cluster assembly protein HDN1F_RS16160 PF10609 NUBPL iron-transfer P-loop NTPase HDN1F_RS16165 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_RS16165 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_RS16165 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_RS16175 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain HDN1F_RS16180 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_RS16180 PF00563 EAL domain HDN1F_RS16180 PF03707 Bacterial signalling protein N terminal repeat HDN1F_RS16190 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HDN1F_RS16190 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HDN1F_RS16190 PF00205 Thiamine pyrophosphate enzyme, central domain HDN1F_RS16205 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_RS16205 PF00563 EAL domain HDN1F_RS16205 PF03707 Bacterial signalling protein N terminal repeat HDN1F_RS16210 PF02562 PhoH-like protein HDN1F_RS16210 PF13638 PIN domain HDN1F_RS16230 PF00171 Aldehyde dehydrogenase family HDN1F_RS16235 PF00919 Uncharacterized protein family UPF0004 HDN1F_RS16235 PF18693 TRAM domain HDN1F_RS16235 PF04055 Radical SAM superfamily HDN1F_RS16240 PF01177 Asp/Glu/Hydantoin racemase HDN1F_RS16245 PF01575 MaoC like domain HDN1F_RS16250 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term HDN1F_RS16250 PF12833 Helix-turn-helix domain HDN1F_RS16260 PF01925 Sulfite exporter TauE/SafE HDN1F_RS16270 PF00108 Thiolase, N-terminal domain HDN1F_RS16270 PF02803 Thiolase, C-terminal domain HDN1F_RS16275 PF07992 Pyridine nucleotide-disulphide oxidoreductase HDN1F_RS16275 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HDN1F_RS16280 PF00849 RNA pseudouridylate synthase HDN1F_RS16285 PF01026 TatD related DNase HDN1F_RS16305 PF05362 Lon protease (S16) C-terminal proteolytic domain HDN1F_RS16305 PF13654 AAA domain HDN1F_RS16310 PF00749 tRNA synthetases class I (E and Q), catalytic domain HDN1F_RS16345 PF00732 GMC oxidoreductase HDN1F_RS16345 PF05199 GMC oxidoreductase HDN1F_RS16350 PF16901 C-terminal domain of alpha-glycerophosphate oxidase HDN1F_RS16350 PF01266 FAD dependent oxidoreductase HDN1F_RS16355 PF00455 DeoR C terminal sensor domain HDN1F_RS16355 PF08220 DeoR-like helix-turn-helix domain HDN1F_RS16360 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HDN1F_RS16360 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HDN1F_RS16365 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HDN1F_RS16365 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HDN1F_RS16370 PF00202 Aminotransferase class-III HDN1F_RS16380 PF00462 Glutaredoxin HDN1F_RS16390 PF00672 HAMP domain HDN1F_RS16390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HDN1F_RS16395 PF01739 CheR methyltransferase, SAM binding domain HDN1F_RS16395 PF03705 CheR methyltransferase, all-alpha domain HDN1F_RS16405 PF01336 OB-fold nucleic acid binding domain HDN1F_RS16405 PF00152 tRNA synthetases class II (D, K and N) HDN1F_RS16410 PF00929 Exonuclease HDN1F_RS16420 PF00764 Arginosuccinate synthase HDN1F_RS16425 PF00672 HAMP domain HDN1F_RS16425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_RS16425 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_RS16425 PF00072 Response regulator receiver domain HDN1F_RS16425 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HDN1F_RS16425 PF01627 Hpt domain HDN1F_RS16430 PF08448 PAS fold HDN1F_RS16430 PF08447 PAS fold HDN1F_RS16430 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_RS16430 PF00563 EAL domain HDN1F_RS16435 PF03966 Trm112p-like protein HDN1F_RS16440 PF10576 Iron-sulfur binding domain of endonuclease III HDN1F_RS16440 PF00730 HhH-GPD superfamily base excision DNA repair protein HDN1F_RS16440 PF00633 Helix-hairpin-helix motif HDN1F_RS16445 PF04060 Putative Fe-S cluster HDN1F_RS16450 PF01588 Putative tRNA binding domain HDN1F_RS16450 PF09334 tRNA synthetases class I (M) HDN1F_RS16455 PF10609 NUBPL iron-transfer P-loop NTPase HDN1F_RS16460 PF00692 dUTPase HDN1F_RS16465 PF03741 Integral membrane protein TerC family HDN1F_RS16470 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_RS16470 PF03707 Bacterial signalling protein N terminal repeat HDN1F_RS16470 PF00563 EAL domain HDN1F_RS16485 PF03050 Transposase IS66 family HDN1F_RS16485 PF13007 Transposase C of IS166 homeodomain HDN1F_RS16485 PF13005 zinc-finger binding domain of transposase IS66 HDN1F_RS16485 PF13817 IS66 C-terminal element HDN1F_RS16490 PF05717 IS66 Orf2 like protein HDN1F_RS16505 PF00551 Formyl transferase HDN1F_RS16510 PF02769 AIR synthase related protein, C-terminal domain HDN1F_RS16510 PF00586 AIR synthase related protein, N-terminal domain HDN1F_RS16520 PF11638 DnaA N-terminal domain HDN1F_RS16520 PF08299 Bacterial dnaA protein helix-turn-helix HDN1F_RS16520 PF00308 Bacterial dnaA protein HDN1F_RS16525 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_RS16525 PF00072 Response regulator receiver domain HDN1F_RS16525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_RS16525 PF01627 Hpt domain HDN1F_RS16530 PF00294 pfkB family carbohydrate kinase HDN1F_RS16540 PF07726 ATPase family associated with various cellular activities (AAA) HDN1F_RS16540 PF17863 AAA lid domain HDN1F_RS16570 PF03960 ArsC family HDN1F_RS16590 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_RS16590 PF05230 MASE2 domain HDN1F_RS16595 PF03129 Anticodon binding domain HDN1F_RS16595 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HDN1F_RS16595 PF04073 Aminoacyl-tRNA editing domain HDN1F_RS16605 PF01336 OB-fold nucleic acid binding domain HDN1F_RS16605 PF00152 tRNA synthetases class II (D, K and N) HDN1F_RS16605 PF02938 GAD domain HDN1F_RS16610 PF02075 Crossover junction endodeoxyribonuclease RuvC HDN1F_RS16615 PF07499 RuvA, C-terminal domain HDN1F_RS16615 PF01330 RuvA N terminal domain HDN1F_RS16620 PF05491 RuvB C-terminal winged helix domain HDN1F_RS16620 PF17864 RuvB AAA lid domain HDN1F_RS16620 PF05496 Holliday junction DNA helicase RuvB P-loop domain HDN1F_RS16625 PF03061 Thioesterase superfamily HDN1F_RS16630 PF01618 MotA/TolQ/ExbB proton channel family HDN1F_RS16635 PF02472 Biopolymer transport protein ExbD/TolR HDN1F_RS16645 PF07676 WD40-like Beta Propeller Repeat HDN1F_RS16645 PF04052 TolB amino-terminal domain HDN1F_RS16650 PF00691 OmpA family HDN1F_RS16660 PF04055 Radical SAM superfamily HDN1F_RS16665 PF06508 Queuosine biosynthesis protein QueC HDN1F_RS16680 PF02445 Quinolinate synthetase A protein HDN1F_RS16685 PF01435 Peptidase family M48 HDN1F_RS16685 PF13181 Tetratricopeptide repeat HDN1F_RS16690 PF01206 Sulfurtransferase TusA HDN1F_RS16695 PF01594 AI-2E family transporter HDN1F_RS16700 PF00578 AhpC/TSA family HDN1F_RS16705 PF01842 ACT domain HDN1F_RS16710 PF00701 Dihydrodipicolinate synthetase family HDN1F_RS16720 PF01259 SAICAR synthetase HDN1F_RS16730 PF03435 Saccharopine dehydrogenase NADP binding domain HDN1F_RS16740 PF00440 Bacterial regulatory proteins, tetR family HDN1F_RS16745 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HDN1F_RS16745 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HDN1F_RS16750 PF03116 NQR2, RnfD, RnfE family HDN1F_RS16760 PF00072 Response regulator receiver domain HDN1F_RS16765 PF03009 Glycerophosphoryl diester phosphodiesterase family HDN1F_RS16770 PF00795 Carbon-nitrogen hydrolase HDN1F_RS16775 PF04371 Porphyromonas-type peptidyl-arginine deiminase HDN1F_RS16785 PF12704 MacB-like periplasmic core domain HDN1F_RS16785 PF02687 FtsX-like permease family HDN1F_RS16790 PF00005 ABC transporter HDN1F_RS16800 PF01618 MotA/TolQ/ExbB proton channel family HDN1F_RS16805 PF02472 Biopolymer transport protein ExbD/TolR HDN1F_RS16810 PF02606 Tetraacyldisaccharide-1-P 4'-kinase HDN1F_RS16815 PF02348 Cytidylyltransferase HDN1F_RS16820 PF01451 Low molecular weight phosphotyrosine protein phosphatase HDN1F_RS16825 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HDN1F_RS16825 PF01565 FAD binding domain HDN1F_RS16830 PF12111 Polyribonucleotide phosphorylase C terminal HDN1F_RS16830 PF10150 Ribonuclease E/G family HDN1F_RS16830 PF00575 S1 RNA binding domain HDN1F_RS16835 PF01479 S4 domain HDN1F_RS16835 PF00849 RNA pseudouridylate synthase HDN1F_RS16840 PF13419 Haloacid dehalogenase-like hydrolase HDN1F_RS16845 PF06965 Na+/H+ antiporter 1 HDN1F_RS16845 PF01343 Peptidase family S49 HDN1F_RS16855 PF02545 Maf-like protein HDN1F_RS16860 PF02620 Large ribosomal RNA subunit accumulation protein YceD HDN1F_RS16865 PF01783 Ribosomal L32p protein family HDN1F_RS16870 PF02504 Fatty acid synthesis protein HDN1F_RS16875 PF00698 Acyl transferase domain HDN1F_RS16885 PF00550 Phosphopantetheine attachment site HDN1F_RS16890 PF02801 Beta-ketoacyl synthase, C-terminal domain HDN1F_RS16890 PF00109 Beta-ketoacyl synthase, N-terminal domain HDN1F_RS16895 PF01063 Amino-transferase class IV HDN1F_RS16900 PF02618 YceG-like family HDN1F_RS16905 PF02223 Thymidylate kinase HDN1F_RS16910 PF09115 DNA polymerase III, delta subunit, C terminal HDN1F_RS16920 PF02646 RmuC family HDN1F_RS16930 PF03144 Elongation factor Tu domain 2 HDN1F_RS16930 PF00009 Elongation factor Tu GTP binding domain HDN1F_RS16930 PF03764 Elongation factor G, domain IV HDN1F_RS16930 PF14492 Elongation Factor G, domain II HDN1F_RS16930 PF00679 Elongation factor G C-terminus HDN1F_RS16940 PF00440 Bacterial regulatory proteins, tetR family HDN1F_RS16950 PF00072 Response regulator receiver domain HDN1F_RS16950 PF01627 Hpt domain HDN1F_RS16950 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_RS16950 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HDN1F_RS16950 PF00672 HAMP domain HDN1F_RS16950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_RS16965 PF00749 tRNA synthetases class I (E and Q), catalytic domain HDN1F_RS16965 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain HDN1F_RS16980 PF00749 tRNA synthetases class I (E and Q), catalytic domain HDN1F_RS16980 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain HDN1F_RS16995 PF04286 Protein of unknown function (DUF445) HDN1F_RS17000 PF12170 DNA polymerase III tau subunit V interacting with alpha HDN1F_RS17000 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding HDN1F_RS17000 PF12169 DNA polymerase III subunits gamma and tau domain III HDN1F_RS17005 PF02575 YbaB/EbfC DNA-binding family HDN1F_RS17010 PF02132 RecR protein HDN1F_RS17010 PF13662 Toprim domain HDN1F_RS17020 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_RS17020 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_RS17020 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_RS17025 PF01612 3'-5' exonuclease HDN1F_RS17025 PF00570 HRDC domain HDN1F_RS17030 PF05166 YcgL domain HDN1F_RS17060 PF17862 AAA+ lid domain HDN1F_RS17060 PF01434 Peptidase family M41 HDN1F_RS17060 PF00004 ATPase family associated with various cellular activities (AAA) HDN1F_RS17070 PF01575 MaoC like domain HDN1F_RS17085 PF00501 AMP-binding enzyme HDN1F_RS17085 PF13193 AMP-binding enzyme C-terminal domain HDN1F_RS17090 PF00270 DEAD/DEAH box helicase HDN1F_RS17090 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold HDN1F_RS17090 PF00271 Helicase conserved C-terminal domain HDN1F_RS17090 PF04408 Helicase associated domain (HA2) HDN1F_RS17090 PF11898 Domain of unknown function (DUF3418) HDN1F_RS17095 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HDN1F_RS17095 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HDN1F_RS17100 PF04333 MlaA lipoprotein HDN1F_RS17125 PF00196 Bacterial regulatory proteins, luxR family HDN1F_RS17125 PF00072 Response regulator receiver domain HDN1F_RS17135 PF00923 Transaldolase/Fructose-6-phosphate aldolase HDN1F_RS17140 PF01207 Dihydrouridine synthase (Dus) HDN1F_RS17155 PF02954 Bacterial regulatory protein, Fis family HDN1F_RS17155 PF00072 Response regulator receiver domain HDN1F_RS17155 PF00158 Sigma-54 interaction domain HDN1F_RS17160 PF07689 KaiB domain HDN1F_RS17160 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_RS17160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_RS17170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_RS17175 PF00072 Response regulator receiver domain HDN1F_RS17175 PF00486 Transcriptional regulatory protein, C terminal HDN1F_RS17185 PF01545 Cation efflux family HDN1F_RS17190 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HDN1F_RS17190 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HDN1F_RS17195 PF16901 C-terminal domain of alpha-glycerophosphate oxidase HDN1F_RS17195 PF01266 FAD dependent oxidoreductase HDN1F_RS17200 PF01565 FAD binding domain HDN1F_RS17200 PF02913 FAD linked oxidases, C-terminal domain HDN1F_RS17205 PF12833 Helix-turn-helix domain HDN1F_RS17205 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term HDN1F_RS17210 PF00106 short chain dehydrogenase HDN1F_RS17215 PF01625 Peptide methionine sulfoxide reductase HDN1F_RS17235 PF01012 Electron transfer flavoprotein domain HDN1F_RS17240 PF00766 Electron transfer flavoprotein FAD-binding domain HDN1F_RS17240 PF01012 Electron transfer flavoprotein domain HDN1F_RS17255 PF01467 Cytidylyltransferase-like HDN1F_RS17255 PF00293 NUDIX domain HDN1F_RS17275 PF09827 CRISPR associated protein Cas2 HDN1F_RS17285 PF18470 Cas9 alpha-helical lobe domain HDN1F_RS17285 PF18541 RuvC endonuclease subdomain 3 HDN1F_RS17285 PF13395 HNH endonuclease HDN1F_RS17300 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HDN1F_RS17300 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HDN1F_RS17310 PF01551 Peptidase family M23 HDN1F_RS17315 PF13742 OB-fold nucleic acid binding domain HDN1F_RS17315 PF02601 Exonuclease VII, large subunit HDN1F_RS17325 PF00463 Isocitrate lyase family HDN1F_RS17330 PF01144 Coenzyme A transferase HDN1F_RS17335 PF01144 Coenzyme A transferase HDN1F_RS17340 PF00364 Biotin-requiring enzyme HDN1F_RS17340 PF00289 Biotin carboxylase, N-terminal domain HDN1F_RS17340 PF02785 Biotin carboxylase C-terminal domain HDN1F_RS17340 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HDN1F_RS17345 PF01039 Carboxyl transferase domain HDN1F_RS17350 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_RS17350 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_RS17350 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_RS17355 PF13411 MerR HTH family regulatory protein HDN1F_RS17365 PF03737 Aldolase/RraA HDN1F_RS17370 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HDN1F_RS17370 PF00056 lactate/malate dehydrogenase, NAD binding domain HDN1F_RS17380 PF01722 BolA-like protein HDN1F_RS17395 PF01171 PP-loop family HDN1F_RS17400 PF07670 Nucleoside recognition HDN1F_RS17405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HDN1F_RS17405 PF03466 LysR substrate binding domain HDN1F_RS17410 PF01274 Malate synthase HDN1F_RS17425 PF08007 Cupin superfamily protein HDN1F_RS17430 PF00206 Lyase HDN1F_RS17430 PF08328 Adenylosuccinate lyase C-terminal HDN1F_RS17435 PF04356 Protein of unknown function (DUF489) HDN1F_RS17450 PF01967 MoaC family HDN1F_RS17455 PF02597 ThiS family HDN1F_RS17460 PF02391 MoaE protein HDN1F_RS17465 PF07992 Pyridine nucleotide-disulphide oxidoreductase HDN1F_RS17470 PF00072 Response regulator receiver domain HDN1F_RS17470 PF00196 Bacterial regulatory proteins, luxR family HDN1F_RS17475 PF02151 UvrB/uvrC motif HDN1F_RS17475 PF01541 GIY-YIG catalytic domain HDN1F_RS17475 PF08459 UvrC Helix-hairpin-helix N-terminal HDN1F_RS17480 PF01066 CDP-alcohol phosphatidyltransferase HDN1F_RS17500 PF11892 Domain of unknown function (DUF3412) HDN1F_RS17500 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases HDN1F_RS17500 PF03641 Possible lysine decarboxylase HDN1F_RS17515 PF00563 EAL domain HDN1F_RS17515 PF08448 PAS fold HDN1F_RS17515 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_RS17540 PF02954 Bacterial regulatory protein, Fis family HDN1F_RS17540 PF00072 Response regulator receiver domain HDN1F_RS17540 PF00158 Sigma-54 interaction domain HDN1F_RS17545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_RS17545 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_RS17560 PF02310 B12 binding domain HDN1F_RS17560 PF01642 Methylmalonyl-CoA mutase HDN1F_RS17565 PF00483 Nucleotidyl transferase HDN1F_RS17570 PF00342 Phosphoglucose isomerase HDN1F_RS17575 PF01648 4'-phosphopantetheinyl transferase superfamily HDN1F_RS17575 PF17837 4'-phosphopantetheinyl transferase N-terminal domain HDN1F_RS17580 PF00437 Type II/IV secretion system protein HDN1F_RS17585 PF00482 Type II secretion system (T2SS), protein F HDN1F_RS17590 PF07963 Prokaryotic N-terminal methylation motif HDN1F_RS17590 PF08334 Type II secretion system (T2SS), protein G HDN1F_RS17600 PF02501 Type II secretion system (T2SS), protein I HDN1F_RS17600 PF07963 Prokaryotic N-terminal methylation motif HDN1F_RS17605 PF07963 Prokaryotic N-terminal methylation motif HDN1F_RS17605 PF11612 Type II secretion system (T2SS), protein J HDN1F_RS17610 PF03934 Type II secretion system (T2SS), protein K HDN1F_RS17615 PF12693 GspL periplasmic domain HDN1F_RS17615 PF05134 Type II secretion system (T2SS), protein L HDN1F_RS17625 PF01471 Putative peptidoglycan binding domain HDN1F_RS17625 PF13401 AAA domain HDN1F_RS17640 PF03109 ABC1 family HDN1F_RS17650 PF05661 Protein of unknown function (DUF808) HDN1F_RS17655 PF00210 Ferritin-like domain HDN1F_RS17665 PF00004 ATPase family associated with various cellular activities (AAA) HDN1F_RS17665 PF01434 Peptidase family M41 HDN1F_RS17665 PF17862 AAA+ lid domain HDN1F_RS17670 PF17754 MftR C-terminal domain HDN1F_RS17670 PF00440 Bacterial regulatory proteins, tetR family HDN1F_RS17700 PF00589 Phage integrase family HDN1F_RS17700 PF02899 Phage integrase, N-terminal SAM-like domain HDN1F_RS17835 PF02796 Helix-turn-helix domain of resolvase HDN1F_RS17835 PF00239 Resolvase, N terminal domain HDN1F_RS17860 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HDN1F_RS17895 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA HDN1F_RS17915 PF04002 RadC-like JAB domain HDN1F_RS17980 PF02195 ParB-like nuclease domain HDN1F_RS17980 PF17762 HTH domain found in ParB protein HDN1F_RS17985 PF13614 AAA domain HDN1F_RS17995 PF09820 Predicted AAA-ATPase HDN1F_RS17995 PF08011 PD-(D/E)XK nuclease superfamily HDN1F_RS18020 PF01207 Dihydrouridine synthase (Dus) HDN1F_RS18025 PF00535 Glycosyl transferase family 2 HDN1F_RS18045 PF00912 Transglycosylase HDN1F_RS18060 PF02074 Carboxypeptidase Taq (M32) metallopeptidase HDN1F_RS18065 PF01464 Transglycosylase SLT domain HDN1F_RS18085 PF00106 short chain dehydrogenase HDN1F_RS18100 PF00083 Sugar (and other) transporter HDN1F_RS18100 PF07690 Major Facilitator Superfamily HDN1F_RS18105 PF03734 L,D-transpeptidase catalytic domain HDN1F_RS18105 PF17969 L,D-transpeptidase C-terminal domain HDN1F_RS18110 PF01979 Amidohydrolase family HDN1F_RS18120 PF00005 ABC transporter HDN1F_RS18130 PF04262 Glutamate-cysteine ligase HDN1F_RS18135 PF04957 Ribosome modulation factor HDN1F_RS18140 PF02600 Disulfide bond formation protein DsbB HDN1F_RS18145 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ HDN1F_RS18150 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HDN1F_RS18150 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HDN1F_RS18160 PF12848 ABC transporter HDN1F_RS18160 PF00005 ABC transporter HDN1F_RS18175 PF12706 Beta-lactamase superfamily domain HDN1F_RS18185 PF00490 Delta-aminolevulinic acid dehydratase HDN1F_RS18195 PF12729 Four helix bundle sensory module for signal transduction HDN1F_RS18195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HDN1F_RS18195 PF00672 HAMP domain HDN1F_RS18205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_RS18205 PF13492 GAF domain HDN1F_RS18205 PF13493 Domain of unknown function (DUF4118) HDN1F_RS18205 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_RS18205 PF02702 Osmosensitive K+ channel His kinase sensor domain HDN1F_RS18210 PF02669 K+-transporting ATPase, c chain HDN1F_RS18220 PF03814 Potassium-transporting ATPase A subunit HDN1F_RS18235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HDN1F_RS18235 PF00672 HAMP domain HDN1F_RS18235 PF12729 Four helix bundle sensory module for signal transduction HDN1F_RS18240 PF02503 Polyphosphate kinase middle domain HDN1F_RS18240 PF17941 Polyphosphate kinase C-terminal domain 1 HDN1F_RS18240 PF13090 Polyphosphate kinase C-terminal domain 2 HDN1F_RS18240 PF13089 Polyphosphate kinase N-terminal domain HDN1F_RS18260 PF00732 GMC oxidoreductase HDN1F_RS18260 PF05199 GMC oxidoreductase HDN1F_RS18280 PF07055 Enoyl reductase FAD binding domain HDN1F_RS18280 PF12241 Trans-2-enoyl-CoA reductase catalytic region HDN1F_RS18280 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase HDN1F_RS18285 PF01546 Peptidase family M20/M25/M40 HDN1F_RS18285 PF07687 Peptidase dimerisation domain HDN1F_RS18290 PF07715 TonB-dependent Receptor Plug Domain HDN1F_RS18290 PF00593 TonB dependent receptor HDN1F_RS18300 PF00472 RF-1 domain HDN1F_RS18325 PF02390 Putative methyltransferase HDN1F_RS18330 PF05690 Thiazole biosynthesis protein ThiG HDN1F_RS18335 PF05690 Thiazole biosynthesis protein ThiG HDN1F_RS18335 PF02597 ThiS family HDN1F_RS18340 PF13673 Acetyltransferase (GNAT) domain HDN1F_RS18350 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH HDN1F_RS18355 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH HDN1F_RS18365 PF00873 AcrB/AcrD/AcrF family HDN1F_RS18370 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HDN1F_RS18390 PF00561 alpha/beta hydrolase fold HDN1F_RS18400 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_RS18400 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_RS18400 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_RS18415 PF01116 Fructose-bisphosphate aldolase class-II HDN1F_RS18420 PF00162 Phosphoglycerate kinase HDN1F_RS18425 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HDN1F_RS18425 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HDN1F_RS18430 PF00456 Transketolase, thiamine diphosphate binding domain HDN1F_RS18430 PF02780 Transketolase, C-terminal domain HDN1F_RS18430 PF02779 Transketolase, pyrimidine binding domain HDN1F_RS18435 PF01022 Bacterial regulatory protein, arsR family HDN1F_RS18440 PF02772 S-adenosylmethionine synthetase, central domain HDN1F_RS18440 PF02773 S-adenosylmethionine synthetase, C-terminal domain HDN1F_RS18440 PF00438 S-adenosylmethionine synthetase, N-terminal domain HDN1F_RS18445 PF05221 S-adenosyl-L-homocysteine hydrolase HDN1F_RS18445 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain HDN1F_RS18450 PF02219 Methylenetetrahydrofolate reductase HDN1F_RS18455 PF08011 PD-(D/E)XK nuclease superfamily HDN1F_RS18455 PF09820 Predicted AAA-ATPase HDN1F_RS18475 PF08011 PD-(D/E)XK nuclease superfamily HDN1F_RS18475 PF09820 Predicted AAA-ATPase HDN1F_RS18480 PF00202 Aminotransferase class-III HDN1F_RS18485 PF07715 TonB-dependent Receptor Plug Domain HDN1F_RS18485 PF00593 TonB dependent receptor HDN1F_RS18525 PF02770 Acyl-CoA dehydrogenase, middle domain HDN1F_RS18525 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HDN1F_RS18525 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HDN1F_RS18540 PF00743 Flavin-binding monooxygenase-like HDN1F_RS18545 PF07859 alpha/beta hydrolase fold HDN1F_RS18570 PF05016 ParE toxin of type II toxin-antitoxin system, parDE HDN1F_RS18590 PF04452 RNA methyltransferase HDN1F_RS18600 PF01339 CheB methylesterase HDN1F_RS18600 PF00072 Response regulator receiver domain HDN1F_RS18605 PF01584 CheW-like domain HDN1F_RS18605 PF02895 Signal transducing histidine kinase, homodimeric domain HDN1F_RS18605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_RS18605 PF01627 Hpt domain HDN1F_RS18605 PF00072 Response regulator receiver domain HDN1F_RS18610 PF01739 CheR methyltransferase, SAM binding domain HDN1F_RS18610 PF03705 CheR methyltransferase, all-alpha domain HDN1F_RS18615 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term HDN1F_RS18615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HDN1F_RS18620 PF01584 CheW-like domain HDN1F_RS18625 PF00072 Response regulator receiver domain HDN1F_RS18630 PF00072 Response regulator receiver domain HDN1F_RS18635 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain HDN1F_RS18635 PF02951 Prokaryotic glutathione synthetase, N-terminal domain HDN1F_RS18645 PF02622 Uncharacterized ACR, COG1678 HDN1F_RS18650 PF03652 Holliday junction resolvase HDN1F_RS18655 PF13640 2OG-Fe(II) oxygenase superfamily HDN1F_RS18655 PF18331 PKHD-type hydroxylase C-terminal domain HDN1F_RS18660 PF01070 FMN-dependent dehydrogenase HDN1F_RS18665 PF00593 TonB dependent receptor HDN1F_RS18665 PF07715 TonB-dependent Receptor Plug Domain HDN1F_RS18675 PF02472 Biopolymer transport protein ExbD/TolR HDN1F_RS18680 PF01618 MotA/TolQ/ExbB proton channel family HDN1F_RS18685 PF08011 PD-(D/E)XK nuclease superfamily HDN1F_RS18685 PF09820 Predicted AAA-ATPase HDN1F_RS18700 PF09820 Predicted AAA-ATPase HDN1F_RS18700 PF08011 PD-(D/E)XK nuclease superfamily HDN1F_RS18710 PF13186 Iron-sulfur cluster-binding domain HDN1F_RS18710 PF04055 Radical SAM superfamily HDN1F_RS18715 PF17805 AsnC-like ligand binding domain HDN1F_RS18720 PF17805 AsnC-like ligand binding domain HDN1F_RS18730 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HDN1F_RS18735 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HDN1F_RS18740 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HDN1F_RS18750 PF08406 CbbQ/NirQ/NorQ C-terminal HDN1F_RS18750 PF07728 AAA domain (dynein-related subfamily) HDN1F_RS18755 PF00115 Cytochrome C and Quinol oxidase polypeptide I HDN1F_RS18760 PF00034 Cytochrome c HDN1F_RS18770 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HDN1F_RS18770 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HDN1F_RS18775 PF01979 Amidohydrolase family HDN1F_RS18785 PF03707 Bacterial signalling protein N terminal repeat HDN1F_RS18785 PF00563 EAL domain HDN1F_RS18785 PF13188 PAS domain HDN1F_RS18785 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_RS18790 PF01339 CheB methylesterase HDN1F_RS18795 PF01739 CheR methyltransferase, SAM binding domain HDN1F_RS18795 PF03705 CheR methyltransferase, all-alpha domain HDN1F_RS18800 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_RS18800 PF09308 LuxQ, periplasmic HDN1F_RS18800 PF00072 Response regulator receiver domain HDN1F_RS18800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_RS18825 PF08681 Protein of unknown function (DUF1778) HDN1F_RS18830 PF00437 Type II/IV secretion system protein HDN1F_RS18835 PF00437 Type II/IV secretion system protein HDN1F_RS18850 PF01168 Alanine racemase, N-terminal domain HDN1F_RS18855 PF03807 NADP oxidoreductase coenzyme F420-dependent HDN1F_RS18855 PF14748 Pyrroline-5-carboxylate reductase dimerisation HDN1F_RS18860 PF02325 YGGT family HDN1F_RS18865 PF02594 Uncharacterised ACR, YggU family COG1872 HDN1F_RS18885 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system HDN1F_RS18890 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system HDN1F_RS18900 PF12728 Helix-turn-helix domain HDN1F_RS18940 PF16326 ABC transporter C-terminal domain HDN1F_RS18940 PF12848 ABC transporter HDN1F_RS18940 PF00005 ABC transporter HDN1F_RS18965 PF12679 ABC-2 family transporter protein HDN1F_RS18970 PF00005 ABC transporter HDN1F_RS18975 PF05048 Periplasmic copper-binding protein (NosD) HDN1F_RS18980 PF04205 FMN-binding domain HDN1F_RS18980 PF12801 4Fe-4S binding domain HDN1F_RS18985 PF18793 Nitrous oxide reductase propeller repeat 2 HDN1F_RS18985 PF18764 Nitrous oxide reductase propeller repeat HDN1F_RS18985 PF13473 Cupredoxin-like domain HDN1F_RS18990 PF00106 short chain dehydrogenase HDN1F_RS19015 PF01476 LysM domain HDN1F_RS19020 PF01327 Polypeptide deformylase HDN1F_RS19025 PF00551 Formyl transferase HDN1F_RS19025 PF02911 Formyl transferase, C-terminal domain HDN1F_RS19030 PF01189 16S rRNA methyltransferase RsmB/F HDN1F_RS19030 PF01029 NusB family HDN1F_RS19040 PF07075 Protein of unknown function (DUF1343) HDN1F_RS19055 PF00301 Rubredoxin HDN1F_RS19080 PF03061 Thioesterase superfamily HDN1F_RS19085 PF00580 UvrD/REP helicase N-terminal domain HDN1F_RS19085 PF13361 UvrD-like helicase C-terminal domain HDN1F_RS19095 PF07044 Protein of unknown function (DUF1329) HDN1F_RS19115 PF01476 LysM domain HDN1F_RS19115 PF03734 L,D-transpeptidase catalytic domain HDN1F_RS19115 PF17969 L,D-transpeptidase C-terminal domain HDN1F_RS19140 PF00877 NlpC/P60 family HDN1F_RS19150 PF01380 SIS domain HDN1F_RS19155 PF12804 MobA-like NTP transferase domain HDN1F_RS19155 PF00132 Bacterial transferase hexapeptide (six repeats) HDN1F_RS19155 PF14602 Hexapeptide repeat of succinyl-transferase HDN1F_RS19160 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain HDN1F_RS19160 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain HDN1F_RS19165 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HDN1F_RS19165 PF02874 ATP synthase alpha/beta family, beta-barrel domain HDN1F_RS19170 PF00231 ATP synthase HDN1F_RS19175 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HDN1F_RS19175 PF00306 ATP synthase alpha/beta chain, C terminal domain HDN1F_RS19175 PF02874 ATP synthase alpha/beta family, beta-barrel domain HDN1F_RS19180 PF00213 ATP synthase delta (OSCP) subunit HDN1F_RS19185 PF00430 ATP synthase B/B' CF(0) HDN1F_RS19190 PF00137 ATP synthase subunit C HDN1F_RS19195 PF00119 ATP synthase A chain HDN1F_RS19200 PF03899 ATP synthase I chain HDN1F_RS19205 PF17762 HTH domain found in ParB protein HDN1F_RS19205 PF02195 ParB-like nuclease domain HDN1F_RS19210 PF13614 AAA domain HDN1F_RS19215 PF02527 rRNA small subunit methyltransferase G HDN1F_RS19220 PF13932 GidA associated domain HDN1F_RS19220 PF01134 Glucose inhibited division protein A HDN1F_RS19225 PF01926 50S ribosome-binding GTPase HDN1F_RS19225 PF12631 MnmE helical domain HDN1F_RS19225 PF10396 GTP-binding protein TrmE N-terminus HDN1F_RS19230 PF14849 YidC periplasmic domain HDN1F_RS19230 PF02096 60Kd inner membrane protein HDN1F_RS19235 PF00825 Ribonuclease P HDN1F_RS19240 PF00468 Ribosomal protein L34 HDN1F_RS19255 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_RS19255 PF00563 EAL domain HDN1F_RS19255 PF03707 Bacterial signalling protein N terminal repeat HDN1F_RS19265 PF08447 PAS fold HDN1F_RS19265 PF08448 PAS fold HDN1F_RS19265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_RS19270 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_RS19270 PF03707 Bacterial signalling protein N terminal repeat HDN1F_RS19270 PF00563 EAL domain HDN1F_RS19280 PF00497 Bacterial extracellular solute-binding proteins, family 3 HDN1F_RS19280 PF00072 Response regulator receiver domain HDN1F_RS19280 PF01627 Hpt domain HDN1F_RS19280 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_RS19280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_RS19285 PF03695 Uncharacterised protein family (UPF0149) HDN1F_RS19325 PF00196 Bacterial regulatory proteins, luxR family HDN1F_RS19330 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain HDN1F_RS19330 PF06165 Glycosyltransferase family 36 HDN1F_RS19330 PF10091 Putative glucoamylase HDN1F_RS19365 PF01476 LysM domain HDN1F_RS19395 PF01757 Acyltransferase family HDN1F_RS19400 PF00534 Glycosyl transferases group 1 HDN1F_RS19400 PF00535 Glycosyl transferase family 2 HDN1F_RS19405 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HDN1F_RS19415 PF00534 Glycosyl transferases group 1 HDN1F_RS19415 PF13439 Glycosyltransferase Family 4 HDN1F_RS19420 PF08245 Mur ligase middle domain HDN1F_RS19420 PF02875 Mur ligase family, glutamate ligase domain HDN1F_RS19420 PF01225 Mur ligase family, catalytic domain HDN1F_RS19425 PF03799 Cell division protein FtsQ HDN1F_RS19425 PF08478 POTRA domain, FtsQ-type HDN1F_RS19435 PF01551 Peptidase family M23 HDN1F_RS19440 PF04536 TPM domain HDN1F_RS19450 PF03309 Type III pantothenate kinase HDN1F_RS19465 PF00440 Bacterial regulatory proteins, tetR family HDN1F_RS19465 PF08360 QacR-like protein, C-terminal region HDN1F_RS19470 PF00135 Carboxylesterase family HDN1F_RS19475 PF00072 Response regulator receiver domain HDN1F_RS19475 PF00158 Sigma-54 interaction domain HDN1F_RS19475 PF02954 Bacterial regulatory protein, Fis family HDN1F_RS19485 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_RS19485 PF08448 PAS fold HDN1F_RS19485 PF00563 EAL domain HDN1F_RS19490 PF03872 Anti sigma-E protein RseA, N-terminal domain HDN1F_RS19490 PF03873 Anti sigma-E protein RseA, C-terminal domain HDN1F_RS19500 PF00440 Bacterial regulatory proteins, tetR family HDN1F_RS19510 PF08990 Erythronolide synthase docking HDN1F_RS19510 PF08240 Alcohol dehydrogenase GroES-like domain HDN1F_RS19510 PF09277 Erythronolide synthase, docking HDN1F_RS19510 PF16197 Ketoacyl-synthetase C-terminal extension HDN1F_RS19510 PF02801 Beta-ketoacyl synthase, C-terminal domain HDN1F_RS19510 PF08659 KR domain HDN1F_RS19510 PF00550 Phosphopantetheine attachment site HDN1F_RS19510 PF14765 Polyketide synthase dehydratase HDN1F_RS19510 PF00698 Acyl transferase domain HDN1F_RS19510 PF00109 Beta-ketoacyl synthase, N-terminal domain HDN1F_RS19515 PF08990 Erythronolide synthase docking HDN1F_RS19515 PF16197 Ketoacyl-synthetase C-terminal extension HDN1F_RS19515 PF00109 Beta-ketoacyl synthase, N-terminal domain HDN1F_RS19515 PF00550 Phosphopantetheine attachment site HDN1F_RS19515 PF00698 Acyl transferase domain HDN1F_RS19515 PF08659 KR domain HDN1F_RS19515 PF02801 Beta-ketoacyl synthase, C-terminal domain HDN1F_RS19520 PF00082 Subtilase family HDN1F_RS19520 PF04151 Bacterial pre-peptidase C-terminal domain HDN1F_RS19535 PF00440 Bacterial regulatory proteins, tetR family HDN1F_RS19545 PF03793 PASTA domain HDN1F_RS19545 PF00069 Protein kinase domain HDN1F_RS19585 PF06715 Gp5 C-terminal repeat (3 copies) HDN1F_RS19585 PF04717 Type VI secretion system, phage-baseplate injector HDN1F_RS19590 PF00899 ThiF family HDN1F_RS19605 PF01209 ubiE/COQ5 methyltransferase family HDN1F_RS19610 PF00672 HAMP domain HDN1F_RS19610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_RS19610 PF00072 Response regulator receiver domain HDN1F_RS19610 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_RS19610 PF01627 Hpt domain HDN1F_RS19610 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HDN1F_RS19615 PF00360 Phytochrome region HDN1F_RS19615 PF00563 EAL domain HDN1F_RS19615 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_RS19615 PF01590 GAF domain HDN1F_RS19625 PF00072 Response regulator receiver domain HDN1F_RS19625 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_RS19630 PF00929 Exonuclease HDN1F_RS19630 PF13307 Helicase C-terminal domain HDN1F_RS19630 PF04851 Type III restriction enzyme, res subunit HDN1F_RS19650 PF01229 Glycosyl hydrolases family 39 HDN1F_RS19655 PF00535 Glycosyl transferase family 2 HDN1F_RS19660 PF00486 Transcriptional regulatory protein, C terminal HDN1F_RS19660 PF00072 Response regulator receiver domain HDN1F_RS19740 PF00563 EAL domain HDN1F_RS19740 PF03707 Bacterial signalling protein N terminal repeat HDN1F_RS19740 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_RS19760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HDN1F_RS19760 PF00672 HAMP domain HDN1F_RS19760 PF02203 Tar ligand binding domain homologue HDN1F_RS19765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_RS19765 PF01627 Hpt domain HDN1F_RS19765 PF01584 CheW-like domain HDN1F_RS19765 PF02895 Signal transducing histidine kinase, homodimeric domain HDN1F_RS19765 PF07194 P2 response regulator binding domain HDN1F_RS19770 PF08447 PAS fold HDN1F_RS19770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HDN1F_RS19770 PF13426 PAS domain HDN1F_RS19775 PF00072 Response regulator receiver domain HDN1F_RS19775 PF09308 LuxQ, periplasmic HDN1F_RS19775 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_RS19775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_RS19780 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_RS19780 PF00563 EAL domain HDN1F_RS19780 PF03707 Bacterial signalling protein N terminal repeat HDN1F_RS19800 PF01458 Uncharacterized protein family (UPF0051) HDN1F_RS19810 PF08361 MAATS-type transcriptional repressor, C-terminal region HDN1F_RS19810 PF00440 Bacterial regulatory proteins, tetR family HDN1F_RS19820 PF00196 Bacterial regulatory proteins, luxR family HDN1F_RS19820 PF17874 MalT-like TPR region HDN1F_RS19825 PF01189 16S rRNA methyltransferase RsmB/F HDN1F_RS19825 PF01029 NusB family HDN1F_RS19840 PF00082 Subtilase family HDN1F_RS19865 PF04355 SmpA / OmlA family HDN1F_RS19905 PF08448 PAS fold HDN1F_RS19905 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_RS19905 PF00563 EAL domain HDN1F_RS19910 PF01627 Hpt domain HDN1F_RS19910 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HDN1F_RS19910 PF00072 Response regulator receiver domain HDN1F_RS19910 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_RS19910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_RS19910 PF00672 HAMP domain HDN1F_RS19915 PF02514 CobN/Magnesium Chelatase HDN1F_RS19920 PF13519 von Willebrand factor type A domain HDN1F_RS19920 PF17863 AAA lid domain HDN1F_RS19920 PF07728 AAA domain (dynein-related subfamily) HDN1F_RS19930 PF00990 Diguanylate cyclase, GGDEF domain HDN1F_RS19930 PF01590 GAF domain HDN1F_RS19930 PF00563 EAL domain HDN1F_RS19930 PF00360 Phytochrome region HDN1F_RS19945 PF08275 DNA primase catalytic core, N-terminal domain HDN1F_RS19945 PF01807 CHC2 zinc finger HDN1F_RS19945 PF13662 Toprim domain HDN1F_RS19945 PF08278 DNA primase DnaG DnaB-binding HDN1F_RS19945 PF10410 DnaB-helicase binding domain of primase HDN1F_RS19955 PF14718 Soluble lytic murein transglycosylase L domain HDN1F_RS19955 PF01464 Transglycosylase SLT domain HDN1F_RS19965 PF04186 FxsA cytoplasmic membrane protein HDN1F_RS19980 PF01844 HNH endonuclease HDN1F_RS20000 PF04354 ZipA, C-terminal FtsZ-binding domain HDN1F_RS20010 PF00072 Response regulator receiver domain HDN1F_RS20015 PF00588 SpoU rRNA Methylase family HDN1F_RS20015 PF08032 RNA 2'-O ribose methyltransferase substrate binding HDN1F_RS20025 PF00512 His Kinase A (phospho-acceptor) domain HDN1F_RS20025 PF00072 Response regulator receiver domain HDN1F_RS20025 PF01627 Hpt domain HDN1F_RS20025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HDN1F_RS20040 PF03772 Competence protein HDN1F_RS20040 PF00753 Metallo-beta-lactamase superfamily HDN1F_RS20045 PF00440 Bacterial regulatory proteins, tetR family HDN1F_RS20045 PF08361 MAATS-type transcriptional repressor, C-terminal region HDN1F_RS20080 PF07963 Prokaryotic N-terminal methylation motif HDN1F_RS20080 PF12019 Type II transport protein GspH HDN1F_RS20100 PF13700 Domain of unknown function (DUF4158) HDN1F_RS20100 PF01526 Tn3 transposase DDE domain HDN1F_RS20105 PF13700 Domain of unknown function (DUF4158) HDN1F_RS20105 PF01526 Tn3 transposase DDE domain HDN1F_RS20145 PF00561 alpha/beta hydrolase fold HDN1F_RS20155 PF12146 Serine aminopeptidase, S33 HDN1F_RS20170 PF08359 YsiA-like protein, C-terminal region HDN1F_RS20170 PF00440 Bacterial regulatory proteins, tetR family HDN1F_RS20185 PF00149 Calcineurin-like phosphoesterase