LOCUS KC430935 2629 bp DNA circular VRL 06-APR-2013 DEFINITION Abutilon golden mosaic Yucatan virus isolate Conkal-2007 segment A, complete sequence. ACCESSION KC430935 VERSION KC430935.1 KEYWORDS . SOURCE Abutilon golden mosaic Yucatan virus ORGANISM Abutilon golden mosaic Yucatan virus Viruses; ssDNA viruses; Geminiviridae; Begomovirus. REFERENCE 1 (bases 1 to 2629) AUTHORS Torres-Herrera,I., Cardenas-Conejo,Y., Ambriz-Granados,S., Mauricio-Castillo,J.A., Moreno-Valenzuela,O. and Arguello-Astorga,G.R. TITLE New SLCV clade begomoviruses isolated from weeds in Yucatan, Mexico JOURNAL Unpublished REFERENCE 2 (bases 1 to 2629) AUTHORS Torres-Herrera,I., Cardenas-Conejo,Y., Ambriz-Granados,S., Mauricio-Castillo,J.A., Moreno-Valenzuela,O. and Arguello-Astorga,G.R. TITLE Direct Submission JOURNAL Submitted (31-DEC-2012) Division de Biologia Molecular, Instituto Potosino de investigacion Cientifica y Tecnologica (IPICYT), Camino a la Presa San Jose 2055. Col. Lomas 4 seccion, San Luis Potosi, S.L.P. 78216, Mexico COMMENT ##Assembly-Data-START## Assembly Method :: DNAStar v. Edit seq, MegAlign Sequencing Technology :: Sanger dideoxy sequencing ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..2629 /organism="Abutilon golden mosaic Yucatan virus" /mol_type="genomic DNA" /isolate="Conkal-2007" /host="Abutilon permolle" /db_xref="taxon:1312723" /segment="A" /country="Mexico: Yucatan, Suytunchen" /collection_date="2007" gene 221..973 /gene="AV1" CDS 221..973 /gene="AV1" /note="capsid protein; encapsulates the viral genome; AR1" /codon_start=1 /product="capsid protein" /protein_id="AGI42760.1" /translation="MPKRDLPWRSIAGTSKVSRNANYSPRAGSGPRNKAFEWVITPMY RKPRIYRMIRTPNVPRGCEGPCKVQSYEQRHDISHVGKVMCISDVTRGNGITHRVGKR FCVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTA TVKNDLRDRYQVMHKFYGKVTGGQYASNEQSIVQRFWKVNNHVVYNHQEAGKYENHTE NALLLYMACTHASNPVYATLKIRIYFYDSITN" gene complement(970..1368) /gene="AC3" CDS complement(970..1368) /gene="AC3" /note="rep-interacting protein; enhances function of Rep protein; AL3" /codon_start=1 /product="REn" /protein_id="AGI42761.1" /translation="MDSRTGELITARQAENGVYIWEIENPLYFKMYRVEDPMYTRTRV YSIQIRFNHNLRRALHLHKAYLNFQVWTTSMTASGSTYLARFRHLVLLYLDRLGVISL NNVIRAVRFATDKAYVNYVLENHSIKFKFY" gene complement(1115..1504) /gene="AC2" CDS complement(1115..1504) /gene="AC2" /note="transcription activator; activation of late genes; silencing-suppressor; AL2" /codon_start=1 /product="TrAP" /protein_id="AGI42762.1" /translation="MRFSSPSNPPSIKTAHRQAKKRAVRRRRIDLECGCSIYFHIGCT GHGFTHRGTHHCTSGREWRLYLGDRKSPLFQDVPSRGPDVHQDQGVQHTDTVQPQPEE SVASPQSLPELPSLDDIDDSFWVDLFS" gene complement(1416..2495) /gene="Rep" CDS complement(1416..2495) /gene="Rep" /note="AL1; rolling-circle initiation protein" /codon_start=1 /product="replication protein" /protein_id="AGI42763.1" /translation="MPRAPGSFRLAAKNIFLTYPQCDLSKDEALQMLQTLSWSVVKPT YIRVAREEHSDGFPHLHCLLQLSGKSNIKDARFFDLTHPRRSATFHPNIQAAKDTNAV KNYITKEGDYCESGQYKVPGGTKANKDDVYHNAVNAPGVGEALDIIRAGDPKTFIVSY HNIKANIERLFVKAPEPWVPPFPLSSFTNVPDEMQEWADDYFGRGSAARPERPLSLIV EGDSRTGKTMWARSLGPHNYLSGHLDFNARVYSNQVEYNVIDDVAPHYLKLKHWKELL GAQKDWQSNCKYGRPVQIKGGIPSIVLCNPGEGASYKDFLDKEENSALRNWTIKNAVF ITLQSALYQDSTQASQEESRQEEAD" gene complement(2024..2416) /gene="AC4" CDS complement(2024..2416) /gene="AC4" /note="AC4 protein" /codon_start=1 /product="AC4" /protein_id="AGI42764.1" /translation="MKLFKCFKPSLGQSSNPHISESHERNIQTGSHTFTVSSSSPASP TSRMLDFSTSLTQEGLPLFTQISRLPKTPTPSRITSPKRVIIVNPDNTRCLAEQRQIR TTFTTTPSMHLVWERLLTLSELEIQRRS" ORIGIN 1 accggatggc cgcgaaattt ttggtgtcca gaactttaat ttagaactaa agttgcccct 61 cgcgtgcact ttcctcttta atttgattta aagcgctgca ctcgcgctat cgtccaatca 121 tattgcgcct gacgagtcta gatatttgca acaacttggg ccctaagttg ttggtccgtt 181 ataaattaaa gaggctttgg cccactgtgt ttaactcaaa atgcctaagc gcgatctccc 241 atggcgctcg atcgcgggaa cgtcaaaggt tagtcgaaat gctaactatt ctcctcgtgc 301 aggaagtggg ccaagaaaca aggcctttga atgggtgatc acgcccatgt acaggaagcc 361 caggatctac cggatgatta ggactcccaa tgtgcccaga ggttgtgaag ggccttgtaa 421 agttcagtcc tatgaacaac gccacgatat ctcacatgtc gggaaggtca tgtgcatctc 481 ggacgtgaca cgtggtaatg ggatcactca tcgtgtgggt aagcgtttct gtgttaagtc 541 tgtgtatatc cttggtaaga tctggatgga cgagaacatc aagctcaaga accacacgaa 601 tagtgttatg ttctggttgg tcagggatcg tagaccgtat ggcactccaa tggatttcgg 661 tcaggtgttc aatatgttcg acaacgagcc cagtactgct acggtgaaga acgatctacg 721 tgatcgttac caggtcatgc acaagttcta tggcaaggtg acaggtggac agtatgccag 781 caatgaacag tctatagtcc agagattctg gaaggtcaac aatcatgtgg tgtacaatca 841 ccaagaggct ggcaaatacg agaaccacac ggagaacgct ttgttactgt atatggcatg 901 tacccatgcc tctaatcctg tgtatgcaac gcttaagatt cgaatctact tctacgattc 961 gatcacgaat taataaaatt taaattttat tgaatgattt tccagtacat aatttacata 1021 cgctttgtct gttgcgaatc gaacagctct gattacattg ttaagactaa tcacgcctaa 1081 ccgatctaaa tacaagagca ctaagtgtct aaatctagct aaataagtcg acccagaagc 1141 tgtcatcgat gtcgtccaga cttggaagtt caggtaagct ttgtggagat gcaacgctct 1201 cctcaggttg tggttgaacc gtatctgtat gctgtacacc ctggtcctgg tgtacatcgg 1261 gtcctctact cggtacatct tgaaatagag gggattttct atctcccaga tatagacgcc 1321 attctctgcc tgacgtgcag tgatgagttc ccctgtgcgt gaatccatgc ccggtacagc 1381 ctatgtgaaa gtagatggag cacccgcact ccaggtcaat ccgcctcctc ctgacggctc 1441 tcttcttggc ttgcctgtgt gctgtcttga tagagggcgg attggagggt gatgaaaacc 1501 gcattcttga tcgtccagtt cctgagagct gagttttcct ctttgtccag gaaatcttta 1561 tagctggcac cctcacctgg attgcaaagc acgattgatg ggatccctcc tttaatttga 1621 actggtctgc cgtatttgca atttgactgc cagtccttct gggcccccag aagttctttc 1681 cagtgcttaa gctttagata gtgcggtgcg acgtcatcaa tgacgttata ctccacttga 1741 tttgagtaga cccgggcatt gaaatcgaga tgaccactaa gatagttatg cgggcccaac 1801 gaacgagccc acatcgtctt ccctgtcctc gagtcaccct caactatgag acttagtggt 1861 ctctcaggcc gcgcagcgga acctctccca aaataatcgt ccgcccactc ctgcatctcg 1921 tccggcacgt tagtgaaaga ggagagggga aaaggaggaa cccacggttc tggagccttt 1981 acaaagaggc gttctatgtt agcctttatg ttatgataac ttactatgaa cgtctttgga 2041 tctccagctc tgataatgtc aagagcctct cccacaccag gtgcattgac ggcgttgtgg 2101 taaacgtcgt ccttatttgc ctttgttccg ccaggcacct tgtattgtcc ggattcacaa 2161 taatcaccct ctttggtgat gtaattcttg acggcgttgg tgtctttggc agcctggata 2221 tttgggtgaa aagtggcaga ccttcttggg tgagtgaggt cgaaaaatct agcatccttg 2281 atgttggact tgccggagag ctggaggaga cagtgaaggt gtgggaaccc gtctgaatgt 2341 tcctctcgtg cgactctgat atatgtgggt ttgacgactg accaagagag ggtttgaagc 2401 atttgaagag cttcatcttt tgataagtcg cactgaggat atgttaagaa aatgtttttg 2461 gctgctaagc gaaatgaacc aggagctcgt ggcatttttg taatatagga aggggacact 2521 gggaggagct ctcaacttct gtgctataat gtggtgtctt ggtgttccat ttatactaaa 2581 agcctcttgg ggacactaag gggcaaaatc ggccatccgc aataatatt //