locus-tag class description MQE35_00005 PF00308 Bacterial dnaA protein MQE35_00005 PF08299 Bacterial dnaA protein helix-turn-helix MQE35_00005 PF11638 DnaA N-terminal domain MQE35_00010 PF01451 Low molecular weight phosphotyrosine protein phosphatase MQE35_00015 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MQE35_00020 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MQE35_00025 PF00171 Aldehyde dehydrogenase family MQE35_00030 PF00291 Pyridoxal-phosphate dependent enzyme MQE35_00030 PF00585 C-terminal regulatory domain of Threonine dehydratase MQE35_00035 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain MQE35_00035 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain MQE35_00040 PF10369 Small subunit of acetolactate synthase MQE35_00040 PF01842 ACT domain MQE35_00045 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MQE35_00045 PF00205 Thiamine pyrophosphate enzyme, central domain MQE35_00045 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MQE35_00050 PF00920 Dehydratase family MQE35_00055 PF00171 Aldehyde dehydrogenase family MQE35_00060 PF00196 Bacterial regulatory proteins, luxR family MQE35_00060 PF00072 Response regulator receiver domain MQE35_00085 PF02626 Carboxyltransferase domain, subdomain A and B MQE35_00090 PF02682 Carboxyltransferase domain, subdomain C and D MQE35_00095 PF03746 LamB/YcsF family MQE35_00100 PF01566 Natural resistance-associated macrophage protein MQE35_00105 PF01078 Magnesium chelatase, subunit ChlI MQE35_00105 PF13335 Magnesium chelatase, subunit ChlI C-terminal MQE35_00145 PF00664 ABC transporter transmembrane region MQE35_00145 PF00005 ABC transporter MQE35_00145 PF03412 Peptidase C39 family MQE35_00165 PF00474 Sodium:solute symporter family MQE35_00180 PF11734 TilS substrate C-terminal domain MQE35_00180 PF01171 PP-loop family MQE35_00185 PF12146 Serine aminopeptidase, S33 MQE35_00195 PF04715 Anthranilate synthase component I, N terminal region MQE35_00195 PF00425 chorismate binding enzyme MQE35_00205 PF00764 Arginosuccinate synthase MQE35_00210 PF01118 Semialdehyde dehydrogenase, NAD binding domain MQE35_00210 PF02774 Semialdehyde dehydrogenase, dimerisation domain MQE35_00215 PF00202 Aminotransferase class-III MQE35_00220 PF00696 Amino acid kinase family MQE35_00220 PF01472 PUA domain MQE35_00225 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain MQE35_00225 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain MQE35_00230 PF00696 Amino acid kinase family MQE35_00235 PF01546 Peptidase family M20/M25/M40 MQE35_00235 PF07687 Peptidase dimerisation domain MQE35_00240 PF00206 Lyase MQE35_00250 PF01263 Aldose 1-epimerase MQE35_00255 PF00221 Aromatic amino acid lyase MQE35_00260 PF01175 Urocanase Rossmann-like domain MQE35_00260 PF17392 Urocanase C-terminal domain MQE35_00260 PF17391 Urocanase N-terminal domain MQE35_00265 PF01979 Amidohydrolase family MQE35_00285 PF07992 Pyridine nucleotide-disulphide oxidoreductase MQE35_00285 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MQE35_00290 PF03553 Na+/H+ antiporter family MQE35_00295 PF10417 C-terminal domain of 1-Cys peroxiredoxin MQE35_00295 PF00578 AhpC/TSA family MQE35_00300 PF00085 Thioredoxin MQE35_00310 PF08534 Redoxin MQE35_00320 PF01580 FtsK/SpoIIIE family MQE35_00320 PF09397 Ftsk gamma domain MQE35_00320 PF17854 FtsK alpha domain MQE35_00320 PF13491 4TM region of DNA translocase FtsK/SpoIIIE MQE35_00335 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase MQE35_00335 PF00925 GTP cyclohydrolase II MQE35_00340 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family MQE35_00355 PF03061 Thioesterase superfamily MQE35_00360 PF01925 Sulfite exporter TauE/SafE MQE35_00370 PF02836 Glycosyl hydrolases family 2, TIM barrel domain MQE35_00370 PF02837 Glycosyl hydrolases family 2, sugar binding domain MQE35_00370 PF16353 Domain of unknown function(DUF4981) MQE35_00370 PF00703 Glycosyl hydrolases family 2 MQE35_00370 PF02929 Beta galactosidase small chain MQE35_00375 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 MQE35_00375 PF00703 Glycosyl hydrolases family 2 MQE35_00375 PF02836 Glycosyl hydrolases family 2, TIM barrel domain MQE35_00375 PF02837 Glycosyl hydrolases family 2, sugar binding domain MQE35_00375 PF16355 Domain of unknown function (DUF4982) MQE35_00380 PF17189 Glycosyl hydrolase family 30 beta sandwich domain MQE35_00385 PF14322 Starch-binding associating with outer membrane MQE35_00385 PF07980 SusD family MQE35_00390 PF07715 TonB-dependent Receptor Plug Domain MQE35_00390 PF00593 TonB dependent receptor MQE35_00395 PF07495 Y_Y_Y domain MQE35_00395 PF00072 Response regulator receiver domain MQE35_00395 PF07494 Two component regulator propeller MQE35_00395 PF12833 Helix-turn-helix domain MQE35_00395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MQE35_00395 PF00512 His Kinase A (phospho-acceptor) domain MQE35_00400 PF07470 Glycosyl Hydrolase Family 88 MQE35_00415 PF07715 TonB-dependent Receptor Plug Domain MQE35_00415 PF00593 TonB dependent receptor MQE35_00425 PF17137 Domain of unknown function (DUF5110) MQE35_00425 PF13802 Galactose mutarotase-like MQE35_00425 PF01055 Glycosyl hydrolases family 31 MQE35_00425 PF16338 Domain of unknown function (DUF4968) MQE35_00435 PF16353 Domain of unknown function(DUF4981) MQE35_00435 PF02929 Beta galactosidase small chain MQE35_00435 PF02837 Glycosyl hydrolases family 2, sugar binding domain MQE35_00435 PF00703 Glycosyl hydrolases family 2 MQE35_00435 PF02836 Glycosyl hydrolases family 2, TIM barrel domain MQE35_00440 PF13472 GDSL-like Lipase/Acylhydrolase family MQE35_00450 PF00596 Class II Aldolase and Adducin N-terminal domain MQE35_00455 PF01261 Xylose isomerase-like TIM barrel MQE35_00460 PF02782 FGGY family of carbohydrate kinases, C-terminal domain MQE35_00460 PF00370 FGGY family of carbohydrate kinases, N-terminal domain MQE35_00465 PF00596 Class II Aldolase and Adducin N-terminal domain MQE35_00470 PF01070 FMN-dependent dehydrogenase MQE35_00480 PF05336 L-rhamnose mutarotase MQE35_00490 PF00356 Bacterial regulatory proteins, lacI family MQE35_00495 PF08666 SAF domain MQE35_00495 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus MQE35_00500 PF08125 Mannitol dehydrogenase C-terminal domain MQE35_00500 PF01232 Mannitol dehydrogenase Rossmann domain MQE35_00510 PF01081 KDPG and KHG aldolase MQE35_00520 PF02614 Glucuronate isomerase MQE35_00530 PF04962 KduI/IolB family MQE35_00535 PF00703 Glycosyl hydrolases family 2 MQE35_00535 PF02836 Glycosyl hydrolases family 2, TIM barrel domain MQE35_00535 PF02837 Glycosyl hydrolases family 2, sugar binding domain MQE35_00535 PF16355 Domain of unknown function (DUF4982) MQE35_00540 PF07470 Glycosyl Hydrolase Family 88 MQE35_00545 PF07980 SusD family MQE35_00545 PF14322 Starch-binding associating with outer membrane MQE35_00550 PF00593 TonB dependent receptor MQE35_00550 PF07715 TonB-dependent Receptor Plug Domain MQE35_00555 PF12891 Glycoside hydrolase family 44 MQE35_00555 PF00942 Cellulose binding domain MQE35_00565 PF07495 Y_Y_Y domain MQE35_00565 PF00072 Response regulator receiver domain MQE35_00565 PF07494 Two component regulator propeller MQE35_00565 PF12833 Helix-turn-helix domain MQE35_00565 PF00512 His Kinase A (phospho-acceptor) domain MQE35_00565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MQE35_00570 PF00106 short chain dehydrogenase MQE35_00575 PF03786 D-mannonate dehydratase (UxuA) MQE35_00580 PF00365 Phosphofructokinase MQE35_00585 PF00593 TonB dependent receptor MQE35_00585 PF07715 TonB-dependent Receptor Plug Domain MQE35_00590 PF14322 Starch-binding associating with outer membrane MQE35_00590 PF07980 SusD family MQE35_00605 PF01189 16S rRNA methyltransferase RsmB/F MQE35_00605 PF01029 NusB family MQE35_00610 PF04231 Endonuclease I MQE35_00615 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal MQE35_00615 PF02769 AIR synthase related protein, C-terminal domain MQE35_00615 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain MQE35_00620 PF00501 AMP-binding enzyme MQE35_00625 PF01047 MarR family MQE35_00630 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain MQE35_00630 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain MQE35_00630 PF00378 Enoyl-CoA hydratase/isomerase MQE35_00635 PF00108 Thiolase, N-terminal domain MQE35_00635 PF02803 Thiolase, C-terminal domain MQE35_00645 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MQE35_00645 PF02770 Acyl-CoA dehydrogenase, middle domain MQE35_00645 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MQE35_00660 PF00723 Glycosyl hydrolases family 15 MQE35_00665 PF00982 Glycosyltransferase family 20 MQE35_00670 PF04389 Peptidase family M28 MQE35_00700 PF00875 DNA photolyase MQE35_00700 PF03441 FAD binding domain of DNA photolyase MQE35_00705 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) MQE35_00725 PF00270 DEAD/DEAH box helicase MQE35_00725 PF00271 Helicase conserved C-terminal domain MQE35_00730 PF00551 Formyl transferase MQE35_00730 PF02911 Formyl transferase, C-terminal domain MQE35_00735 PF00216 Bacterial DNA-binding protein MQE35_00740 PF02622 Uncharacterized ACR, COG1678 MQE35_00790 PF00326 Prolyl oligopeptidase family MQE35_00790 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region MQE35_00795 PF07980 SusD family MQE35_00800 PF00593 TonB dependent receptor MQE35_00800 PF07715 TonB-dependent Receptor Plug Domain MQE35_00805 PF01266 FAD dependent oxidoreductase MQE35_00810 PF05544 Proline racemase MQE35_00815 PF00171 Aldehyde dehydrogenase family MQE35_00820 PF00701 Dihydrodipicolinate synthetase family MQE35_00825 PF12833 Helix-turn-helix domain MQE35_00825 PF02311 AraC-like ligand binding domain MQE35_00830 PF00703 Glycosyl hydrolases family 2 MQE35_00830 PF02836 Glycosyl hydrolases family 2, TIM barrel domain MQE35_00830 PF02929 Beta galactosidase small chain MQE35_00830 PF16353 Domain of unknown function(DUF4981) MQE35_00830 PF02837 Glycosyl hydrolases family 2, sugar binding domain MQE35_00850 PF08241 Methyltransferase domain MQE35_00865 PF01259 SAICAR synthetase MQE35_00870 PF02562 PhoH-like protein MQE35_00875 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase MQE35_00885 PF02767 DNA polymerase III beta subunit, central domain MQE35_00885 PF02768 DNA polymerase III beta subunit, C-terminal domain MQE35_00885 PF00712 DNA polymerase III beta subunit, N-terminal domain MQE35_00905 PF12631 MnmE helical domain MQE35_00905 PF10396 GTP-binding protein TrmE N-terminus MQE35_00905 PF01926 50S ribosome-binding GTPase MQE35_00915 PF13087 AAA domain MQE35_00915 PF13091 PLD-like domain MQE35_00965 PF00437 Type II/IV secretion system protein MQE35_00965 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain MQE35_00970 PF07963 Prokaryotic N-terminal methylation motif MQE35_00970 PF14245 Type IV pilin PilA MQE35_01055 PF00482 Type II secretion system (T2SS), protein F MQE35_01070 PF00030 Beta/Gamma crystallin MQE35_01075 PF07715 TonB-dependent Receptor Plug Domain MQE35_01075 PF00593 TonB dependent receptor MQE35_01120 PF04539 Sigma-70 region 3 MQE35_01120 PF04545 Sigma-70, region 4 MQE35_01120 PF04542 Sigma-70 region 2 MQE35_01120 PF00140 Sigma-70 factor, region 1.2 MQE35_01120 PF03979 Sigma-70 factor, region 1.1 MQE35_01145 PF00171 Aldehyde dehydrogenase family MQE35_01155 PF10996 Beta-Casp domain MQE35_01155 PF00753 Metallo-beta-lactamase superfamily MQE35_01155 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain MQE35_01180 PF07311 Dodecin MQE35_01185 PF00156 Phosphoribosyl transferase domain MQE35_01185 PF01738 Dienelactone hydrolase family MQE35_01190 PF00156 Phosphoribosyl transferase domain MQE35_01190 PF01738 Dienelactone hydrolase family MQE35_01195 PF00582 Universal stress protein family MQE35_01200 PF00072 Response regulator receiver domain MQE35_01200 PF00486 Transcriptional regulatory protein, C terminal MQE35_01205 PF16736 Single Cache-like MQE35_01205 PF00512 His Kinase A (phospho-acceptor) domain MQE35_01205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MQE35_01205 PF00989 PAS fold MQE35_01215 PF12704 MacB-like periplasmic core domain MQE35_01215 PF00005 ABC transporter MQE35_01215 PF02687 FtsX-like permease family MQE35_01220 PF00005 ABC transporter MQE35_01225 PF00480 ROK family MQE35_01235 PF00005 ABC transporter MQE35_01240 PF02405 Permease MlaE MQE35_01250 PF03641 Possible lysine decarboxylase MQE35_01265 PF08281 Sigma-70, region 4 MQE35_01265 PF04542 Sigma-70 region 2 MQE35_01275 PF00593 TonB dependent receptor MQE35_01275 PF07715 TonB-dependent Receptor Plug Domain MQE35_01280 PF07980 SusD family MQE35_01280 PF14322 Starch-binding associating with outer membrane MQE35_01285 PF00578 AhpC/TSA family MQE35_01290 PF05193 Peptidase M16 inactive domain MQE35_01290 PF00675 Insulinase (Peptidase family M16) MQE35_01300 PF02525 Flavodoxin-like fold MQE35_01315 PF00593 TonB dependent receptor MQE35_01315 PF07715 TonB-dependent Receptor Plug Domain MQE35_01350 PF02311 AraC-like ligand binding domain MQE35_01350 PF12833 Helix-turn-helix domain MQE35_01360 PF01497 Periplasmic binding protein MQE35_01360 PF12833 Helix-turn-helix domain MQE35_01375 PF04616 Glycosyl hydrolases family 43 MQE35_01400 PF14322 Starch-binding associating with outer membrane MQE35_01400 PF07980 SusD family MQE35_01405 PF07715 TonB-dependent Receptor Plug Domain MQE35_01405 PF00593 TonB dependent receptor MQE35_01425 PF07698 7TM receptor with intracellular HD hydrolase MQE35_01425 PF07697 7TM-HD extracellular MQE35_01425 PF01966 HD domain MQE35_01430 PF02803 Thiolase, C-terminal domain MQE35_01430 PF00108 Thiolase, N-terminal domain MQE35_01435 PF00877 NlpC/P60 family MQE35_01445 PF00521 DNA gyrase/topoisomerase IV, subunit A MQE35_01445 PF03989 DNA gyrase C-terminal domain, beta-propeller MQE35_01450 PF07724 AAA domain (Cdc48 subfamily) MQE35_01450 PF17871 AAA lid domain MQE35_01450 PF02861 Clp amino terminal domain, pathogenicity island component MQE35_01450 PF10431 C-terminal, D2-small domain, of ClpB protein MQE35_01450 PF00004 ATPase family associated with various cellular activities (AAA) MQE35_01460 PF08443 RimK-like ATP-grasp domain MQE35_01460 PF18030 RimK PreATP-grasp domain MQE35_01465 PF03060 Nitronate monooxygenase MQE35_01475 PF02469 Fasciclin domain MQE35_01480 PF02096 60Kd inner membrane protein MQE35_01480 PF14849 YidC periplasmic domain MQE35_01485 PF00117 Glutamine amidotransferase class-I MQE35_01485 PF06418 CTP synthase N-terminus MQE35_01490 PF12843 Putative quorum-sensing-regulated virulence factor MQE35_01500 PF02540 NAD synthase MQE35_01500 PF00958 GMP synthase C terminal domain MQE35_01500 PF00117 Glutamine amidotransferase class-I MQE35_01505 PF00282 Pyridoxal-dependent decarboxylase conserved domain MQE35_01515 PF10079 Bacillithiol biosynthesis BshC MQE35_01525 PF00478 IMP dehydrogenase / GMP reductase domain MQE35_01525 PF00571 CBS domain MQE35_01535 PF09375 Imelysin MQE35_01575 PF13419 Haloacid dehalogenase-like hydrolase MQE35_01580 PF01180 Dihydroorotate dehydrogenase MQE35_01585 PF07687 Peptidase dimerisation domain MQE35_01585 PF01546 Peptidase family M20/M25/M40 MQE35_01605 PF01923 Cobalamin adenosyltransferase MQE35_01615 PF07516 SecA Wing and Scaffold domain MQE35_01615 PF07517 SecA DEAD-like domain MQE35_01615 PF01043 SecA preprotein cross-linking domain MQE35_01620 PF04116 Fatty acid hydroxylase superfamily MQE35_01630 PF04542 Sigma-70 region 2 MQE35_01630 PF08281 Sigma-70, region 4 MQE35_01640 PF01625 Peptide methionine sulfoxide reductase MQE35_01655 PF08281 Sigma-70, region 4 MQE35_01655 PF04542 Sigma-70 region 2 MQE35_01660 PF01263 Aldose 1-epimerase MQE35_01665 PF00535 Glycosyl transferase family 2 MQE35_01670 PF07578 Lipid A Biosynthesis N-terminal domain MQE35_01670 PF02684 Lipid-A-disaccharide synthetase MQE35_01685 PF01569 PAP2 superfamily MQE35_01695 PF07992 Pyridine nucleotide-disulphide oxidoreductase MQE35_01695 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MQE35_01700 PF01220 Dehydroquinase class II MQE35_01715 PF00589 Phage integrase family MQE35_01715 PF02899 Phage integrase, N-terminal SAM-like domain MQE35_01735 PF01546 Peptidase family M20/M25/M40 MQE35_01760 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD MQE35_01790 PF17863 AAA lid domain MQE35_01790 PF07726 ATPase family associated with various cellular activities (AAA) MQE35_01800 PF00210 Ferritin-like domain MQE35_01805 PF03466 LysR substrate binding domain MQE35_01805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MQE35_01850 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain MQE35_01850 PF13378 Enolase C-terminal domain-like MQE35_01870 PF07715 TonB-dependent Receptor Plug Domain MQE35_01870 PF00593 TonB dependent receptor MQE35_01880 PF07992 Pyridine nucleotide-disulphide oxidoreductase MQE35_01890 PF03453 MoeA N-terminal region (domain I and II) MQE35_01890 PF03454 MoeA C-terminal region (domain IV) MQE35_01890 PF00994 Probable molybdopterin binding domain MQE35_01895 PF03459 TOBE domain MQE35_01895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MQE35_01910 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MQE35_01915 PF14824 Sirohaem biosynthesis protein central MQE35_01915 PF10414 Sirohaem synthase dimerisation region MQE35_01915 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MQE35_01925 PF00581 Rhodanese-like domain MQE35_01925 PF00899 ThiF family MQE35_01935 PF01967 MoaC family MQE35_01940 PF04055 Radical SAM superfamily MQE35_01940 PF06463 Molybdenum Cofactor Synthesis C MQE35_01960 PF01568 Molydopterin dinucleotide binding domain MQE35_01960 PF00384 Molybdopterin oxidoreductase MQE35_01960 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MQE35_01965 PF00005 ABC transporter MQE35_01970 PF00005 ABC transporter MQE35_01975 PF00528 Binding-protein-dependent transport system inner membrane component MQE35_01980 PF00005 ABC transporter MQE35_01985 PF00072 Response regulator receiver domain MQE35_01985 PF00196 Bacterial regulatory proteins, luxR family MQE35_01990 PF07730 Histidine kinase MQE35_01990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MQE35_02005 PF01077 Nitrite and sulphite reductase 4Fe-4S domain MQE35_02005 PF04324 BFD-like [2Fe-2S] binding domain MQE35_02005 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain MQE35_02005 PF07992 Pyridine nucleotide-disulphide oxidoreductase MQE35_02005 PF18267 Rubredoxin NAD+ reductase C-terminal domain MQE35_02010 PF00072 Response regulator receiver domain MQE35_02010 PF04397 LytTr DNA-binding domain MQE35_02015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MQE35_02015 PF06580 Histidine kinase MQE35_02015 PF07694 5TMR of 5TMR-LYT MQE35_02030 PF04041 beta-1,4-mannooligosaccharide phosphorylase MQE35_02045 PF01112 Asparaginase MQE35_02055 PF02321 Outer membrane efflux protein MQE35_02060 PF00873 AcrB/AcrD/AcrF family MQE35_02065 PF00529 HlyD membrane-fusion protein of T1SS MQE35_02065 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MQE35_02075 PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain MQE35_02075 PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain MQE35_02075 PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain MQE35_02075 PF08531 Alpha-L-rhamnosidase N-terminal domain MQE35_02080 PF08531 Alpha-L-rhamnosidase N-terminal domain MQE35_02080 PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain MQE35_02080 PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain MQE35_02080 PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain MQE35_02100 PF01965 DJ-1/PfpI family MQE35_02110 PF00578 AhpC/TSA family MQE35_02125 PF07715 TonB-dependent Receptor Plug Domain MQE35_02125 PF00593 TonB dependent receptor MQE35_02145 PF01569 PAP2 superfamily MQE35_02150 PF08019 Phosphoethanolamine transferase EptA/EptB MQE35_02150 PF00884 Sulfatase MQE35_02220 PF06580 Histidine kinase MQE35_02220 PF13492 GAF domain MQE35_02220 PF07694 5TMR of 5TMR-LYT MQE35_02220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MQE35_02245 PF12704 MacB-like periplasmic core domain MQE35_02245 PF02687 FtsX-like permease family MQE35_02250 PF00005 ABC transporter MQE35_02260 PF00657 GDSL-like Lipase/Acylhydrolase MQE35_02260 PF00404 Dockerin type I domain MQE35_02260 PF00150 Cellulase (glycosyl hydrolase family 5) MQE35_02260 PF17996 Carbohydrate esterase 2 N-terminal MQE35_02265 PF08281 Sigma-70, region 4 MQE35_02265 PF04542 Sigma-70 region 2 MQE35_02290 PF04055 Radical SAM superfamily MQE35_02295 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain MQE35_02295 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain MQE35_02300 PF00672 HAMP domain MQE35_02300 PF01627 Hpt domain MQE35_02300 PF00072 Response regulator receiver domain MQE35_02300 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) MQE35_02300 PF00512 His Kinase A (phospho-acceptor) domain MQE35_02300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MQE35_02305 PF02606 Tetraacyldisaccharide-1-P 4'-kinase MQE35_02310 PF01784 NIF3 (NGG1p interacting factor 3) MQE35_02330 PF00106 short chain dehydrogenase MQE35_02335 PF04002 RadC-like JAB domain MQE35_02370 PF12833 Helix-turn-helix domain MQE35_02370 PF02311 AraC-like ligand binding domain MQE35_02380 PF08241 Methyltransferase domain MQE35_02390 PF00334 Nucleoside diphosphate kinase MQE35_02400 PF01368 DHH family MQE35_02400 PF02272 DHHA1 domain MQE35_02410 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD MQE35_02415 PF01037 Lrp/AsnC ligand binding domain MQE35_02415 PF13404 AsnC-type helix-turn-helix domain MQE35_02425 PF04209 homogentisate 1,2-dioxygenase MQE35_02430 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MQE35_02445 PF00351 Biopterin-dependent aromatic amino acid hydroxylase MQE35_02455 PF07687 Peptidase dimerisation domain MQE35_02455 PF01546 Peptidase family M20/M25/M40 MQE35_02465 PF01979 Amidohydrolase family MQE35_02470 PF01979 Amidohydrolase family MQE35_02480 PF00588 SpoU rRNA Methylase family MQE35_02480 PF08032 RNA 2'-O ribose methyltransferase substrate binding MQE35_02485 PF01435 Peptidase family M48 MQE35_02490 PF02824 TGS domain MQE35_02490 PF04607 Region found in RelA / SpoT proteins MQE35_02490 PF13291 ACT domain MQE35_02495 PF01475 Ferric uptake regulator family MQE35_02500 PF00709 Adenylosuccinate synthetase MQE35_02510 PF00202 Aminotransferase class-III MQE35_02530 PF08501 Shikimate dehydrogenase substrate binding domain MQE35_02550 PF01966 HD domain MQE35_02550 PF00013 KH domain MQE35_02550 PF12072 Domain of unknown function (DUF3552) MQE35_02570 PF01551 Peptidase family M23 MQE35_02570 PF08460 Bacterial SH3 domain MQE35_02590 PF00266 Aminotransferase class-V MQE35_02630 PF00202 Aminotransferase class-III MQE35_02635 PF00933 Glycosyl hydrolase family 3 N terminal domain MQE35_02635 PF01915 Glycosyl hydrolase family 3 C-terminal domain MQE35_02645 PF02754 Cysteine-rich domain MQE35_02645 PF13183 4Fe-4S dicluster domain MQE35_02655 PF02754 Cysteine-rich domain MQE35_02655 PF13183 4Fe-4S dicluster domain MQE35_02665 PF01520 N-acetylmuramoyl-L-alanine amidase MQE35_02665 PF11741 AMIN domain MQE35_02670 PF04453 LPS transport system D MQE35_02675 PF01042 Endoribonuclease L-PSP MQE35_02715 PF01032 FecCD transport family MQE35_02720 PF00005 ABC transporter MQE35_02725 PF01252 Signal peptidase (SPase) II MQE35_02730 PF02646 RmuC family MQE35_02755 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MQE35_02755 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain MQE35_02755 PF02142 MGS-like domain MQE35_02760 PF00468 Ribosomal protein L34 MQE35_02780 PF13091 PLD-like domain MQE35_02780 PF13396 Phospholipase_D-nuclease N-terminal MQE35_02800 PF04055 Radical SAM superfamily MQE35_02800 PF01938 TRAM domain MQE35_02800 PF00919 Uncharacterized protein family UPF0004 MQE35_02805 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MQE35_02825 PF00004 ATPase family associated with various cellular activities (AAA) MQE35_02825 PF05362 Lon protease (S16) C-terminal proteolytic domain MQE35_02825 PF02190 ATP-dependent protease La (LON) substrate-binding domain MQE35_02850 PF11700 Vacuole effluxer Atg22 like MQE35_02865 PF01641 SelR domain MQE35_02870 PF01641 SelR domain MQE35_02880 PF01934 Protein of unknown function DUF86 MQE35_02890 PF01554 MatE MQE35_02895 PF03819 MazG nucleotide pyrophosphohydrolase domain MQE35_02930 PF01327 Polypeptide deformylase MQE35_02935 PF03652 Holliday junction resolvase MQE35_02940 PF00132 Bacterial transferase hexapeptide (six repeats) MQE35_02940 PF14602 Hexapeptide repeat of succinyl-transferase MQE35_02940 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal MQE35_02945 PF00535 Glycosyl transferase family 2 MQE35_02950 PF00535 Glycosyl transferase family 2 MQE35_02950 PF02709 N-terminal domain of galactosyltransferase MQE35_02965 PF13439 Glycosyltransferase Family 4 MQE35_02965 PF00534 Glycosyl transferases group 1 MQE35_02975 PF01300 Telomere recombination MQE35_02980 PF01966 HD domain MQE35_02980 PF01743 Poly A polymerase head domain MQE35_02980 PF12627 Probable RNA and SrmB- binding site of polymerase A MQE35_02985 PF02628 Cytochrome oxidase assembly protein MQE35_03025 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain MQE35_03025 PF03129 Anticodon binding domain MQE35_03025 PF02824 TGS domain MQE35_03025 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MQE35_03030 PF05198 Translation initiation factor IF-3, N-terminal domain MQE35_03030 PF00707 Translation initiation factor IF-3, C-terminal domain MQE35_03035 PF01632 Ribosomal protein L35 MQE35_03040 PF00453 Ribosomal protein L20 MQE35_03050 PF01894 Uncharacterised protein family UPF0047 MQE35_03060 PF07715 TonB-dependent Receptor Plug Domain MQE35_03060 PF00593 TonB dependent receptor MQE35_03075 PF00772 DnaB-like helicase N terminal domain MQE35_03075 PF03796 DnaB-like helicase C terminal domain MQE35_03080 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit MQE35_03095 PF01702 Queuine tRNA-ribosyltransferase MQE35_03100 PF02779 Transketolase, pyrimidine binding domain MQE35_03100 PF02780 Transketolase, C-terminal domain MQE35_03100 PF00456 Transketolase, thiamine diphosphate binding domain MQE35_03110 PF13292 1-deoxy-D-xylulose-5-phosphate synthase MQE35_03110 PF02779 Transketolase, pyrimidine binding domain MQE35_03110 PF02780 Transketolase, C-terminal domain MQE35_03125 PF01479 S4 domain MQE35_03135 PF00156 Phosphoribosyl transferase domain MQE35_03140 PF01202 Shikimate kinase MQE35_03160 PF02310 B12 binding domain MQE35_03160 PF02607 B12 binding domain MQE35_03160 PF13411 MerR HTH family regulatory protein MQE35_03165 PF01593 Flavin containing amine oxidoreductase MQE35_03180 PF00578 AhpC/TSA family MQE35_03195 PF00330 Aconitase family (aconitate hydratase) MQE35_03195 PF00694 Aconitase C-terminal domain MQE35_03200 PF17863 AAA lid domain MQE35_03200 PF07726 ATPase family associated with various cellular activities (AAA) MQE35_03205 PF00639 PPIC-type PPIASE domain MQE35_03205 PF09312 SurA N-terminal domain MQE35_03225 PF01638 HxlR-like helix-turn-helix MQE35_03235 PF04055 Radical SAM superfamily MQE35_03235 PF18693 TRAM domain MQE35_03235 PF00919 Uncharacterized protein family UPF0004 MQE35_03250 PF00578 AhpC/TSA family MQE35_03250 PF10417 C-terminal domain of 1-Cys peroxiredoxin MQE35_03255 PF02954 Bacterial regulatory protein, Fis family MQE35_03255 PF00158 Sigma-54 interaction domain MQE35_03255 PF00072 Response regulator receiver domain MQE35_03260 PF00924 Mechanosensitive ion channel MQE35_03260 PF12795 Mechanosensitive ion channel porin domain MQE35_03260 PF12794 Mechanosensitive ion channel inner membrane domain 1 MQE35_03270 PF00005 ABC transporter MQE35_03270 PF13732 Domain of unknown function (DUF4162) MQE35_03275 PF00226 DnaJ domain MQE35_03275 PF01556 DnaJ C terminal domain MQE35_03275 PF00684 DnaJ central domain MQE35_03280 PF01025 GrpE MQE35_03285 PF04264 YceI-like domain MQE35_03290 PF08338 Domain of unknown function (DUF1731) MQE35_03290 PF01370 NAD dependent epimerase/dehydratase family MQE35_03295 PF01266 FAD dependent oxidoreductase MQE35_03295 PF05430 S-adenosyl-L-methionine-dependent methyltransferase MQE35_03300 PF01063 Amino-transferase class IV MQE35_03320 PF00072 Response regulator receiver domain MQE35_03320 PF04397 LytTr DNA-binding domain MQE35_03325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MQE35_03325 PF00512 His Kinase A (phospho-acceptor) domain MQE35_03330 PF02810 SEC-C motif MQE35_03330 PF07517 SecA DEAD-like domain MQE35_03330 PF01043 SecA preprotein cross-linking domain MQE35_03330 PF07516 SecA Wing and Scaffold domain MQE35_03350 PF01494 FAD binding domain MQE35_03360 PF02678 Pirin MQE35_03360 PF17954 Quercetinase C-terminal cupin domain MQE35_03365 PF00266 Aminotransferase class-V MQE35_03370 PF01596 O-methyltransferase MQE35_03380 PF01569 PAP2 superfamily MQE35_03385 PF02416 mttA/Hcf106 family MQE35_03390 PF06415 BPG-independent PGAM N-terminus (iPGM_N) MQE35_03390 PF01676 Metalloenzyme superfamily MQE35_03425 PF00557 Metallopeptidase family M24 MQE35_03450 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH MQE35_03465 PF03575 Peptidase family S51 MQE35_03470 PF01209 ubiE/COQ5 methyltransferase family MQE35_03475 PF02424 ApbE family MQE35_03485 PF00970 Oxidoreductase FAD-binding domain MQE35_03485 PF00111 2Fe-2S iron-sulfur cluster binding domain MQE35_03485 PF00175 Oxidoreductase NAD-binding domain MQE35_03490 PF02508 Rnf-Nqr subunit, membrane protein MQE35_03495 PF02508 Rnf-Nqr subunit, membrane protein MQE35_03500 PF04205 FMN-binding domain MQE35_03505 PF03116 NQR2, RnfD, RnfE family MQE35_03510 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) MQE35_03510 PF11973 NQRA C-terminal domain MQE35_03525 PF04379 ApaG domain MQE35_03570 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain MQE35_03575 PF02527 rRNA small subunit methyltransferase G MQE35_03580 PF00487 Fatty acid desaturase MQE35_03585 PF00155 Aminotransferase class I and II MQE35_03600 PF00030 Beta/Gamma crystallin MQE35_03605 PF02018 Carbohydrate binding domain MQE35_03605 PF00722 Glycosyl hydrolases family 16 MQE35_03610 PF00030 Beta/Gamma crystallin MQE35_03615 PF00704 Glycosyl hydrolases family 18 MQE35_03620 PF06483 Chitinase C MQE35_03620 PF00704 Glycosyl hydrolases family 18 MQE35_03640 PF00356 Bacterial regulatory proteins, lacI family MQE35_03645 PF00728 Glycosyl hydrolase family 20, catalytic domain MQE35_03645 PF02838 Glycosyl hydrolase family 20, domain 2 MQE35_03645 PF07691 PA14 domain MQE35_03650 PF01979 Amidohydrolase family MQE35_03660 PF00356 Bacterial regulatory proteins, lacI family MQE35_03670 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase MQE35_03685 PF14322 Starch-binding associating with outer membrane MQE35_03685 PF07980 SusD family MQE35_03690 PF00593 TonB dependent receptor MQE35_03690 PF07715 TonB-dependent Receptor Plug Domain MQE35_03695 PF02614 Glucuronate isomerase MQE35_03700 PF00106 short chain dehydrogenase MQE35_03705 PF00356 Bacterial regulatory proteins, lacI family MQE35_03710 PF03786 D-mannonate dehydratase (UxuA) MQE35_03715 PF07690 Major Facilitator Superfamily MQE35_03720 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase MQE35_03720 PF02585 GlcNAc-PI de-N-acetylase MQE35_03750 PF01734 Patatin-like phospholipase MQE35_03830 PF03135 CagE, TrbE, VirB family, component of type IV transporter system MQE35_03895 PF00072 Response regulator receiver domain MQE35_03895 PF04397 LytTr DNA-binding domain MQE35_03905 PF08245 Mur ligase middle domain MQE35_03905 PF01225 Mur ligase family, catalytic domain MQE35_03905 PF02875 Mur ligase family, glutamate ligase domain MQE35_03910 PF00245 Alkaline phosphatase MQE35_03915 PF07715 TonB-dependent Receptor Plug Domain MQE35_03915 PF00593 TonB dependent receptor MQE35_03920 PF07980 SusD family MQE35_03920 PF14322 Starch-binding associating with outer membrane MQE35_03935 PF00593 TonB dependent receptor MQE35_03935 PF07715 TonB-dependent Receptor Plug Domain MQE35_03940 PF13229 Right handed beta helix region MQE35_03945 PF16385 Domain of unknown function MQE35_03945 PF00884 Sulfatase MQE35_03965 PF14322 Starch-binding associating with outer membrane MQE35_03965 PF07980 SusD family MQE35_03970 PF07715 TonB-dependent Receptor Plug Domain MQE35_03970 PF00593 TonB dependent receptor MQE35_03980 PF16338 Domain of unknown function (DUF4968) MQE35_03980 PF17137 Domain of unknown function (DUF5110) MQE35_03980 PF01055 Glycosyl hydrolases family 31 MQE35_03980 PF13802 Galactose mutarotase-like MQE35_03985 PF14310 Fibronectin type III-like domain MQE35_03985 PF00933 Glycosyl hydrolase family 3 N terminal domain MQE35_03985 PF01915 Glycosyl hydrolase family 3 C-terminal domain MQE35_04000 PF01263 Aldose 1-epimerase MQE35_04025 PF00593 TonB dependent receptor MQE35_04025 PF07715 TonB-dependent Receptor Plug Domain MQE35_04050 PF02836 Glycosyl hydrolases family 2, TIM barrel domain MQE35_04050 PF02929 Beta galactosidase small chain MQE35_04050 PF02837 Glycosyl hydrolases family 2, sugar binding domain MQE35_04050 PF00703 Glycosyl hydrolases family 2 MQE35_04050 PF16353 Domain of unknown function(DUF4981) MQE35_04065 PF00593 TonB dependent receptor MQE35_04065 PF07715 TonB-dependent Receptor Plug Domain MQE35_04070 PF00072 Response regulator receiver domain MQE35_04070 PF12833 Helix-turn-helix domain MQE35_04105 PF00072 Response regulator receiver domain MQE35_04105 PF00196 Bacterial regulatory proteins, luxR family MQE35_04120 PF03631 Virulence factor BrkB MQE35_04145 PF09424 Yqey-like protein MQE35_04150 PF12327 FtsZ family, C-terminal domain MQE35_04150 PF00091 Tubulin/FtsZ family, GTPase domain MQE35_04155 PF02491 SHS2 domain inserted in FTSA MQE35_04165 PF01225 Mur ligase family, catalytic domain MQE35_04165 PF08245 Mur ligase middle domain MQE35_04165 PF02875 Mur ligase family, glutamate ligase domain MQE35_04170 PF03033 Glycosyltransferase family 28 N-terminal domain MQE35_04170 PF04101 Glycosyltransferase family 28 C-terminal domain MQE35_04175 PF01098 Cell cycle protein MQE35_04180 PF02875 Mur ligase family, glutamate ligase domain MQE35_04180 PF08245 Mur ligase middle domain MQE35_04185 PF00953 Glycosyl transferase family 4 MQE35_04185 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 MQE35_04190 PF01225 Mur ligase family, catalytic domain MQE35_04190 PF02875 Mur ligase family, glutamate ligase domain MQE35_04190 PF08245 Mur ligase middle domain MQE35_04195 PF00905 Penicillin binding protein transpeptidase domain MQE35_04195 PF03717 Penicillin-binding Protein dimerisation domain MQE35_04205 PF01795 MraW methylase family MQE35_04210 PF02381 MraZ protein, putative antitoxin-like MQE35_04215 PF12697 Alpha/beta hydrolase family MQE35_04220 PF01926 50S ribosome-binding GTPase MQE35_04235 PF02540 NAD synthase MQE35_04240 PF00072 Response regulator receiver domain MQE35_04240 PF00196 Bacterial regulatory proteins, luxR family MQE35_04245 PF01807 CHC2 zinc finger MQE35_04245 PF08275 DNA primase catalytic core, N-terminal domain MQE35_04245 PF10410 DnaB-helicase binding domain of primase MQE35_04265 PF00348 Polyprenyl synthetase MQE35_04270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MQE35_04270 PF07730 Histidine kinase MQE35_04275 PF00072 Response regulator receiver domain MQE35_04275 PF00196 Bacterial regulatory proteins, luxR family MQE35_04305 PF04055 Radical SAM superfamily MQE35_04315 PF01050 Mannose-6-phosphate isomerase MQE35_04315 PF00483 Nucleotidyl transferase MQE35_04335 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) MQE35_04335 PF02817 e3 binding domain MQE35_04335 PF00364 Biotin-requiring enzyme MQE35_04340 PF00676 Dehydrogenase E1 component MQE35_04345 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region MQE35_04355 PF03781 Sulfatase-modifying factor enzyme 1 MQE35_04360 PF01225 Mur ligase family, catalytic domain MQE35_04360 PF02875 Mur ligase family, glutamate ligase domain MQE35_04360 PF08245 Mur ligase middle domain MQE35_04370 PF07730 Histidine kinase MQE35_04370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MQE35_04375 PF00072 Response regulator receiver domain MQE35_04375 PF00196 Bacterial regulatory proteins, luxR family MQE35_04410 PF01351 Ribonuclease HII MQE35_04425 PF00593 TonB dependent receptor MQE35_04425 PF07715 TonB-dependent Receptor Plug Domain MQE35_04440 PF00939 Sodium:sulfate symporter transmembrane region MQE35_04455 PF03099 Biotin/lipoate A/B protein ligase family MQE35_04470 PF01679 Proteolipid membrane potential modulator MQE35_04475 PF01336 OB-fold nucleic acid binding domain MQE35_04475 PF00152 tRNA synthetases class II (D, K and N) MQE35_04495 PF00202 Aminotransferase class-III MQE35_04500 PF01476 LysM domain MQE35_04500 PF00877 NlpC/P60 family MQE35_04505 PF00291 Pyridoxal-phosphate dependent enzyme MQE35_04540 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain MQE35_04540 PF01411 tRNA synthetases class II (A) MQE35_04540 PF02272 DHHA1 domain MQE35_04545 PF08460 Bacterial SH3 domain MQE35_04545 PF01551 Peptidase family M23 MQE35_04575 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal MQE35_04575 PF01926 50S ribosome-binding GTPase MQE35_04600 PF07650 KH domain MQE35_04600 PF01926 50S ribosome-binding GTPase MQE35_04605 PF01235 Sodium:alanine symporter family MQE35_04765 PF01000 RNA polymerase Rpb3/RpoA insert domain MQE35_04765 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain MQE35_04765 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain MQE35_04790 PF01555 DNA methylase MQE35_04830 PF01381 Helix-turn-helix MQE35_04850 PF02311 AraC-like ligand binding domain MQE35_04850 PF12833 Helix-turn-helix domain MQE35_04855 PF00106 short chain dehydrogenase MQE35_04860 PF00248 Aldo/keto reductase family MQE35_04875 PF01569 PAP2 superfamily MQE35_04910 PF00245 Alkaline phosphatase MQE35_04925 PF00005 ABC transporter MQE35_04940 PF07715 TonB-dependent Receptor Plug Domain MQE35_04940 PF00593 TonB dependent receptor MQE35_04945 PF00005 ABC transporter MQE35_04950 PF02836 Glycosyl hydrolases family 2, TIM barrel domain MQE35_04950 PF00703 Glycosyl hydrolases family 2 MQE35_04950 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 MQE35_04950 PF02837 Glycosyl hydrolases family 2, sugar binding domain MQE35_04955 PF07745 Glycosyl hydrolase family 53 MQE35_04965 PF14322 Starch-binding associating with outer membrane MQE35_04965 PF07980 SusD family MQE35_04970 PF00593 TonB dependent receptor MQE35_04970 PF07715 TonB-dependent Receptor Plug Domain MQE35_04975 PF07495 Y_Y_Y domain MQE35_04975 PF00072 Response regulator receiver domain MQE35_04975 PF07494 Two component regulator propeller MQE35_04975 PF12833 Helix-turn-helix domain MQE35_04975 PF00512 His Kinase A (phospho-acceptor) domain MQE35_04975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MQE35_04985 PF00288 GHMP kinases N terminal domain MQE35_04985 PF10509 Galactokinase galactose-binding signature MQE35_04985 PF08544 GHMP kinases C terminal MQE35_04990 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain MQE35_04990 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain MQE35_05025 PF00106 short chain dehydrogenase MQE35_05030 PF12833 Helix-turn-helix domain MQE35_05030 PF02311 AraC-like ligand binding domain MQE35_05035 PF03992 Antibiotic biosynthesis monooxygenase MQE35_05060 PF13302 Acetyltransferase (GNAT) domain MQE35_05070 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MQE35_05095 PF01810 LysE type translocator MQE35_05175 PF00873 AcrB/AcrD/AcrF family MQE35_05185 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain MQE35_05185 PF02896 PEP-utilising enzyme, TIM barrel domain MQE35_05185 PF00391 PEP-utilising enzyme, mobile domain MQE35_05190 PF16326 ABC transporter C-terminal domain MQE35_05190 PF12848 ABC transporter MQE35_05190 PF00005 ABC transporter MQE35_05200 PF01266 FAD dependent oxidoreductase MQE35_05220 PF03781 Sulfatase-modifying factor enzyme 1 MQE35_05230 PF01131 DNA topoisomerase MQE35_05230 PF01751 Toprim domain MQE35_05230 PF13368 Topoisomerase C-terminal repeat MQE35_05240 PF00919 Uncharacterized protein family UPF0004 MQE35_05240 PF01938 TRAM domain MQE35_05240 PF04055 Radical SAM superfamily MQE35_05245 PF00158 Sigma-54 interaction domain MQE35_05265 PF00166 Chaperonin 10 Kd subunit MQE35_05270 PF00118 TCP-1/cpn60 chaperonin family MQE35_05295 PF12833 Helix-turn-helix domain MQE35_05295 PF00512 His Kinase A (phospho-acceptor) domain MQE35_05295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MQE35_05295 PF00072 Response regulator receiver domain MQE35_05295 PF07495 Y_Y_Y domain MQE35_05295 PF07494 Two component regulator propeller MQE35_05305 PF02142 MGS-like domain MQE35_05305 PF01808 AICARFT/IMPCHase bienzyme MQE35_05325 PF03717 Penicillin-binding Protein dimerisation domain MQE35_05325 PF00905 Penicillin binding protein transpeptidase domain MQE35_05330 PF01098 Cell cycle protein MQE35_05335 PF00528 Binding-protein-dependent transport system inner membrane component MQE35_05335 PF12911 N-terminal TM domain of oligopeptide transport permease C MQE35_05340 PF11818 C-terminal domain of tail specific protease (DUF3340) MQE35_05340 PF03572 Peptidase family S41 MQE35_05340 PF17804 Tail specific protease N-terminal domain MQE35_05340 PF00595 PDZ domain MQE35_05345 PF01975 Survival protein SurE MQE35_05355 PF02684 Lipid-A-disaccharide synthetase MQE35_05360 PF00877 NlpC/P60 family MQE35_05365 PF03772 Competence protein MQE35_05365 PF00753 Metallo-beta-lactamase superfamily MQE35_05365 PF13567 Domain of unknown function (DUF4131) MQE35_05370 PF00854 POT family MQE35_05375 PF00854 POT family MQE35_05380 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region MQE35_05380 PF00326 Prolyl oligopeptidase family MQE35_05385 PF00368 Hydroxymethylglutaryl-coenzyme A reductase MQE35_05400 PF00639 PPIC-type PPIASE domain MQE35_05400 PF09312 SurA N-terminal domain MQE35_05405 PF03471 Transporter associated domain MQE35_05405 PF00571 CBS domain MQE35_05430 PF03309 Type III pantothenate kinase MQE35_05445 PF00150 Cellulase (glycosyl hydrolase family 5) MQE35_05445 PF13004 Putative binding domain, N-terminal MQE35_05450 PF00933 Glycosyl hydrolase family 3 N terminal domain MQE35_05450 PF14310 Fibronectin type III-like domain MQE35_05450 PF01915 Glycosyl hydrolase family 3 C-terminal domain MQE35_05455 PF14508 Glycosyl-hydrolase 97 N-terminal MQE35_05455 PF10566 Glycoside hydrolase 97 MQE35_05455 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation MQE35_05460 PF16355 Domain of unknown function (DUF4982) MQE35_05460 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 MQE35_05460 PF00703 Glycosyl hydrolases family 2 MQE35_05460 PF02836 Glycosyl hydrolases family 2, TIM barrel domain MQE35_05460 PF02837 Glycosyl hydrolases family 2, sugar binding domain MQE35_05470 PF07980 SusD family MQE35_05470 PF14322 Starch-binding associating with outer membrane MQE35_05475 PF00593 TonB dependent receptor MQE35_05475 PF07715 TonB-dependent Receptor Plug Domain MQE35_05480 PF01261 Xylose isomerase-like TIM barrel MQE35_05500 PF01471 Putative peptidoglycan binding domain MQE35_05500 PF07486 Cell Wall Hydrolase MQE35_05505 PF00083 Sugar (and other) transporter MQE35_05510 PF08244 Glycosyl hydrolases family 32 C terminal MQE35_05510 PF00251 Glycosyl hydrolases family 32 N-terminal domain MQE35_05515 PF13344 Haloacid dehalogenase-like hydrolase MQE35_05520 PF02627 Carboxymuconolactone decarboxylase family MQE35_05535 PF12368 Rhodanase C-terminal MQE35_05535 PF00581 Rhodanese-like domain MQE35_05535 PF17773 UPF0176 acylphosphatase like domain MQE35_05545 PF01048 Phosphorylase superfamily MQE35_05550 PF01209 ubiE/COQ5 methyltransferase family MQE35_05580 PF00574 Clp protease MQE35_05590 PF00535 Glycosyl transferase family 2 MQE35_05605 PF00005 ABC transporter MQE35_05605 PF02687 FtsX-like permease family MQE35_05605 PF12704 MacB-like periplasmic core domain MQE35_05610 PF00005 ABC transporter MQE35_05615 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MQE35_05630 PF00072 Response regulator receiver domain MQE35_05630 PF04397 LytTr DNA-binding domain MQE35_05635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MQE35_05635 PF06580 Histidine kinase MQE35_05635 PF07694 5TMR of 5TMR-LYT MQE35_05670 PF00849 RNA pseudouridylate synthase MQE35_05670 PF01479 S4 domain MQE35_05695 PF03073 TspO/MBR family MQE35_05710 PF03009 Glycerophosphoryl diester phosphodiesterase family MQE35_05715 PF00128 Alpha amylase, catalytic domain MQE35_05715 PF11896 Domain of unknown function (DUF3416) MQE35_05720 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation MQE35_05720 PF10566 Glycoside hydrolase 97 MQE35_05720 PF14508 Glycosyl-hydrolase 97 N-terminal MQE35_05725 PF01055 Glycosyl hydrolases family 31 MQE35_05725 PF17137 Domain of unknown function (DUF5110) MQE35_05725 PF16338 Domain of unknown function (DUF4968) MQE35_05725 PF13802 Galactose mutarotase-like MQE35_05730 PF10438 Cyclo-malto-dextrinase C-terminal domain MQE35_05730 PF09087 Cyclomaltodextrinase, N-terminal MQE35_05730 PF00128 Alpha amylase, catalytic domain MQE35_05735 PF03633 Glycosyl hydrolase family 65, C-terminal domain MQE35_05735 PF03632 Glycosyl hydrolase family 65 central catalytic domain MQE35_05735 PF03636 Glycosyl hydrolase family 65, N-terminal domain MQE35_05740 PF13419 Haloacid dehalogenase-like hydrolase MQE35_05750 PF00356 Bacterial regulatory proteins, lacI family MQE35_05755 PF00593 TonB dependent receptor MQE35_05755 PF07715 TonB-dependent Receptor Plug Domain MQE35_05770 PF00128 Alpha amylase, catalytic domain MQE35_05770 PF11941 Domain of unknown function (DUF3459) MQE35_05780 PF00356 Bacterial regulatory proteins, lacI family MQE35_05785 PF00593 TonB dependent receptor MQE35_05785 PF07715 TonB-dependent Receptor Plug Domain MQE35_05800 PF07715 TonB-dependent Receptor Plug Domain MQE35_05800 PF00593 TonB dependent receptor MQE35_05835 PF02156 Glycosyl hydrolase family 26 MQE35_05850 PF03190 Protein of unknown function, DUF255 MQE35_05875 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase MQE35_05880 PF02405 Permease MlaE MQE35_05885 PF00005 ABC transporter MQE35_05900 PF02547 Queuosine biosynthesis protein MQE35_05905 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family MQE35_05905 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain MQE35_05905 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain MQE35_05915 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) MQE35_05940 PF02580 D-Tyr-tRNA(Tyr) deacylase MQE35_05945 PF03193 RsgA GTPase MQE35_05945 PF16745 RsgA N-terminal domain MQE35_05955 PF00793 DAHP synthetase I family MQE35_05955 PF18152 DAHP synthase ferredoxin-like domain MQE35_05960 PF01842 ACT domain MQE35_05960 PF02153 Prephenate dehydrogenase MQE35_05965 PF00155 Aminotransferase class I and II MQE35_05970 PF00800 Prephenate dehydratase MQE35_05970 PF01817 Chorismate mutase type II MQE35_05970 PF01842 ACT domain MQE35_05975 PF00155 Aminotransferase class I and II MQE35_05980 PF01370 NAD dependent epimerase/dehydratase family MQE35_05985 PF01037 Lrp/AsnC ligand binding domain MQE35_05990 PF00005 ABC transporter MQE35_06005 PF02219 Methylenetetrahydrofolate reductase MQE35_06010 PF02574 Homocysteine S-methyltransferase MQE35_06010 PF02607 B12 binding domain MQE35_06010 PF02310 B12 binding domain MQE35_06010 PF02965 Vitamin B12 dependent methionine synthase, activation domain MQE35_06010 PF00809 Pterin binding enzyme MQE35_06015 PF02310 B12 binding domain MQE35_06015 PF02607 B12 binding domain MQE35_06015 PF02965 Vitamin B12 dependent methionine synthase, activation domain MQE35_06015 PF02574 Homocysteine S-methyltransferase MQE35_06015 PF00809 Pterin binding enzyme MQE35_06020 PF07992 Pyridine nucleotide-disulphide oxidoreductase MQE35_06025 PF01077 Nitrite and sulphite reductase 4Fe-4S domain MQE35_06025 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain MQE35_06030 PF01053 Cys/Met metabolism PLP-dependent enzyme MQE35_06035 PF00696 Amino acid kinase family MQE35_06035 PF03447 Homoserine dehydrogenase, NAD binding domain MQE35_06035 PF00742 Homoserine dehydrogenase MQE35_06040 PF02772 S-adenosylmethionine synthetase, central domain MQE35_06040 PF02773 S-adenosylmethionine synthetase, C-terminal domain MQE35_06040 PF00438 S-adenosylmethionine synthetase, N-terminal domain MQE35_06045 PF01712 Deoxynucleoside kinase MQE35_06050 PF03030 Inorganic H+ pyrophosphatase MQE35_06055 PF00719 Inorganic pyrophosphatase MQE35_06065 PF02780 Transketolase, C-terminal domain MQE35_06065 PF02779 Transketolase, pyrimidine binding domain MQE35_06065 PF00364 Biotin-requiring enzyme MQE35_06070 PF01012 Electron transfer flavoprotein domain MQE35_06075 PF01012 Electron transfer flavoprotein domain MQE35_06075 PF00766 Electron transfer flavoprotein FAD-binding domain MQE35_06085 PF07670 Nucleoside recognition MQE35_06085 PF07662 Na+ dependent nucleoside transporter C-terminus MQE35_06085 PF01773 Na+ dependent nucleoside transporter N-terminus MQE35_06105 PF00303 Thymidylate synthase MQE35_06110 PF00128 Alpha amylase, catalytic domain MQE35_06110 PF02806 Alpha amylase, C-terminal all-beta domain MQE35_06110 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) MQE35_06125 PF00186 Dihydrofolate reductase MQE35_06130 PF03881 Fructosamine kinase MQE35_06135 PF01177 Asp/Glu/Hydantoin racemase MQE35_06150 PF01103 Surface antigen MQE35_06150 PF07244 Surface antigen variable number repeat MQE35_06155 PF01255 Putative undecaprenyl diphosphate synthase MQE35_06165 PF01513 ATP-NAD kinase MQE35_06175 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ MQE35_06185 PF00561 alpha/beta hydrolase fold MQE35_06190 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) MQE35_06195 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV MQE35_06200 PF05698 Bacterial trigger factor protein (TF) C-terminus MQE35_06200 PF05697 Bacterial trigger factor protein (TF) MQE35_06205 PF00574 Clp protease MQE35_06210 PF07724 AAA domain (Cdc48 subfamily) MQE35_06210 PF10431 C-terminal, D2-small domain, of ClpB protein MQE35_06210 PF06689 ClpX C4-type zinc finger MQE35_06230 PF03979 Sigma-70 factor, region 1.1 MQE35_06230 PF00140 Sigma-70 factor, region 1.2 MQE35_06230 PF04539 Sigma-70 region 3 MQE35_06230 PF04545 Sigma-70, region 4 MQE35_06230 PF04542 Sigma-70 region 2 MQE35_06240 PF01165 Ribosomal protein S21 MQE35_06245 PF00313 'Cold-shock' DNA-binding domain MQE35_06275 PF08240 Alcohol dehydrogenase GroES-like domain MQE35_06275 PF00107 Zinc-binding dehydrogenase MQE35_06290 PF00226 DnaJ domain MQE35_06290 PF01556 DnaJ C terminal domain MQE35_06300 PF00403 Heavy-metal-associated domain MQE35_06315 PF01546 Peptidase family M20/M25/M40 MQE35_06315 PF07687 Peptidase dimerisation domain MQE35_06325 PF05736 OprF membrane domain MQE35_06325 PF00691 OmpA family MQE35_06335 PF00115 Cytochrome C and Quinol oxidase polypeptide I MQE35_06345 PF00034 Cytochrome c MQE35_06345 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP MQE35_06345 PF13442 Cytochrome C oxidase, cbb3-type, subunit III MQE35_06350 PF13746 4Fe-4S dicluster domain MQE35_06350 PF12801 4Fe-4S binding domain MQE35_06350 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase MQE35_06365 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain MQE35_06365 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain MQE35_06370 PF04055 Radical SAM superfamily MQE35_06370 PF06969 HemN C-terminal domain MQE35_06390 PF01343 Peptidase family S49 MQE35_06395 PF01712 Deoxynucleoside kinase MQE35_06400 PF08032 RNA 2'-O ribose methyltransferase substrate binding MQE35_06400 PF00588 SpoU rRNA Methylase family MQE35_06405 PF00488 MutS domain V MQE35_06405 PF05190 MutS family domain IV MQE35_06405 PF05192 MutS domain III MQE35_06405 PF05188 MutS domain II MQE35_06405 PF01624 MutS domain I MQE35_06420 PF01209 ubiE/COQ5 methyltransferase family MQE35_06425 PF12833 Helix-turn-helix domain MQE35_06425 PF02311 AraC-like ligand binding domain MQE35_06475 PF00583 Acetyltransferase (GNAT) family MQE35_06500 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MQE35_06510 PF06580 Histidine kinase MQE35_06510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MQE35_06510 PF00672 HAMP domain MQE35_06510 PF02743 Cache domain MQE35_06515 PF00072 Response regulator receiver domain MQE35_06515 PF04397 LytTr DNA-binding domain MQE35_06555 PF01588 Putative tRNA binding domain MQE35_06565 PF02627 Carboxymuconolactone decarboxylase family MQE35_06575 PF00698 Acyl transferase domain MQE35_06580 PF00132 Bacterial transferase hexapeptide (six repeats) MQE35_06585 PF04397 LytTr DNA-binding domain MQE35_06585 PF00072 Response regulator receiver domain MQE35_06590 PF13492 GAF domain MQE35_06590 PF06580 Histidine kinase MQE35_06590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MQE35_06590 PF07694 5TMR of 5TMR-LYT MQE35_06610 PF01106 NifU-like domain MQE35_06625 PF03190 Protein of unknown function, DUF255 MQE35_06630 PF00924 Mechanosensitive ion channel MQE35_06630 PF05552 Conserved TM helix MQE35_06635 PF00814 Glycoprotease family MQE35_06645 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MQE35_06650 PF02687 FtsX-like permease family MQE35_06650 PF12704 MacB-like periplasmic core domain MQE35_06650 PF00005 ABC transporter MQE35_06655 PF12704 MacB-like periplasmic core domain MQE35_06655 PF00005 ABC transporter MQE35_06655 PF02687 FtsX-like permease family MQE35_06660 PF00005 ABC transporter MQE35_06670 PF04238 Protein of unknown function (DUF420) MQE35_06675 PF02630 SCO1/SenC MQE35_06690 PF00510 Cytochrome c oxidase subunit III MQE35_06695 PF00510 Cytochrome c oxidase subunit III MQE35_06700 PF01040 UbiA prenyltransferase family MQE35_06720 PF01597 Glycine cleavage H-protein MQE35_06730 PF07499 RuvA, C-terminal domain MQE35_06730 PF01330 RuvA N terminal domain MQE35_06735 PF03949 Malic enzyme, NAD binding domain MQE35_06735 PF00390 Malic enzyme, N-terminal domain MQE35_06735 PF01515 Phosphate acetyl/butaryl transferase MQE35_06740 PF01204 Trehalase MQE35_06745 PF08331 Domain of unknown function (DUF1730) MQE35_06750 PF05491 RuvB C-terminal winged helix domain MQE35_06750 PF17864 RuvB AAA lid domain MQE35_06750 PF05496 Holliday junction DNA helicase RuvB P-loop domain MQE35_06760 PF01293 Phosphoenolpyruvate carboxykinase MQE35_06820 PF00115 Cytochrome C and Quinol oxidase polypeptide I MQE35_06825 PF00116 Cytochrome C oxidase subunit II, periplasmic domain MQE35_06825 PF06481 COX Aromatic Rich Motif MQE35_06845 PF00829 Ribosomal prokaryotic L21 protein MQE35_06850 PF00037 4Fe-4S binding domain MQE35_06850 PF13247 4Fe-4S dicluster domain MQE35_06855 PF00034 Cytochrome c MQE35_06865 PF11987 Translation-initiation factor 2 MQE35_06865 PF00009 Elongation factor Tu GTP binding domain MQE35_06865 PF04760 Translation initiation factor IF-2, N-terminal region MQE35_06870 PF08529 NusA N-terminal domain MQE35_06870 PF13184 NusA-like KH domain MQE35_06875 PF02576 RimP N-terminal domain MQE35_06880 PF00582 Universal stress protein family MQE35_06900 PF01522 Polysaccharide deacetylase MQE35_06900 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain MQE35_06905 PF00085 Thioredoxin MQE35_06910 PF00149 Calcineurin-like phosphoesterase MQE35_06910 PF10518 TAT (twin-arginine translocation) pathway signal sequence MQE35_06915 PF03932 CutC family MQE35_06920 PF01612 3'-5' exonuclease MQE35_06920 PF00476 DNA polymerase family A MQE35_06920 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain MQE35_06920 PF01367 5'-3' exonuclease, C-terminal SAM fold MQE35_06925 PF00572 Ribosomal protein L13 MQE35_06930 PF00380 Ribosomal protein S9/S16 MQE35_06935 PF00318 Ribosomal protein S2 MQE35_06940 PF00889 Elongation factor TS MQE35_06945 PF00696 Amino acid kinase family MQE35_06950 PF01765 Ribosome recycling factor MQE35_06965 PF00152 tRNA synthetases class II (D, K and N) MQE35_06965 PF01336 OB-fold nucleic acid binding domain MQE35_06970 PF00309 Sigma-54 factor, Activator interacting domain (AID) MQE35_06970 PF04963 Sigma-54 factor, core binding domain MQE35_06970 PF04552 Sigma-54, DNA binding domain MQE35_07000 PF01618 MotA/TolQ/ExbB proton channel family MQE35_07010 PF17763 Glutaminase/Asparaginase C-terminal domain MQE35_07010 PF00710 Asparaginase, N-terminal MQE35_07020 PF01026 TatD related DNase MQE35_07030 PF07730 Histidine kinase MQE35_07030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MQE35_07030 PF05384 Sensor protein DegS MQE35_07035 PF00072 Response regulator receiver domain MQE35_07035 PF00196 Bacterial regulatory proteins, luxR family MQE35_07040 PF02817 e3 binding domain MQE35_07040 PF00364 Biotin-requiring enzyme MQE35_07040 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) MQE35_07045 PF02779 Transketolase, pyrimidine binding domain MQE35_07045 PF16870 2-oxoglutarate dehydrogenase C-terminal MQE35_07045 PF00676 Dehydrogenase E1 component MQE35_07045 PF16078 2-oxoglutarate dehydrogenase N-terminus MQE35_07060 PF01979 Amidohydrolase family MQE35_07065 PF16363 GDP-mannose 4,6 dehydratase MQE35_07070 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family MQE35_07075 PF02390 Putative methyltransferase MQE35_07075 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) MQE35_07090 PF01638 HxlR-like helix-turn-helix MQE35_07105 PF01546 Peptidase family M20/M25/M40 MQE35_07105 PF07687 Peptidase dimerisation domain MQE35_07120 PF00072 Response regulator receiver domain MQE35_07120 PF00486 Transcriptional regulatory protein, C terminal MQE35_07165 PF04397 LytTr DNA-binding domain MQE35_07165 PF00072 Response regulator receiver domain MQE35_07175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MQE35_07175 PF00360 Phytochrome region MQE35_07175 PF08446 PAS fold MQE35_07175 PF00512 His Kinase A (phospho-acceptor) domain MQE35_07175 PF01590 GAF domain MQE35_07185 PF08446 PAS fold MQE35_07185 PF00512 His Kinase A (phospho-acceptor) domain MQE35_07185 PF01590 GAF domain MQE35_07185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MQE35_07185 PF00360 Phytochrome region MQE35_07195 PF00072 Response regulator receiver domain MQE35_07200 PF05192 MutS domain III MQE35_07200 PF01624 MutS domain I MQE35_07200 PF05188 MutS domain II MQE35_07200 PF00488 MutS domain V MQE35_07200 PF05190 MutS family domain IV MQE35_07210 PF04237 YjbR MQE35_07235 PF06969 HemN C-terminal domain MQE35_07235 PF04055 Radical SAM superfamily MQE35_07240 PF02075 Crossover junction endodeoxyribonuclease RuvC MQE35_07260 PF00474 Sodium:solute symporter family MQE35_07265 PF01261 Xylose isomerase-like TIM barrel MQE35_07270 PF02782 FGGY family of carbohydrate kinases, C-terminal domain MQE35_07270 PF00370 FGGY family of carbohydrate kinases, N-terminal domain MQE35_07275 PF00356 Bacterial regulatory proteins, lacI family MQE35_07280 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component MQE35_07285 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component MQE35_07290 PF03480 Bacterial extracellular solute-binding protein, family 7 MQE35_07305 PF02614 Glucuronate isomerase MQE35_07310 PF07691 PA14 domain MQE35_07310 PF01915 Glycosyl hydrolase family 3 C-terminal domain MQE35_07310 PF00933 Glycosyl hydrolase family 3 N terminal domain MQE35_07310 PF14310 Fibronectin type III-like domain MQE35_07315 PF03648 Glycosyl hydrolase family 67 N-terminus MQE35_07315 PF07488 Glycosyl hydrolase family 67 middle domain MQE35_07315 PF07477 Glycosyl hydrolase family 67 C-terminus MQE35_07320 PF00106 short chain dehydrogenase MQE35_07325 PF03786 D-mannonate dehydratase (UxuA) MQE35_07330 PF00331 Glycosyl hydrolase family 10 MQE35_07330 PF03426 Carbohydrate binding domain (family 15) MQE35_07335 PF00085 Thioredoxin MQE35_07350 PF00311 Phosphoenolpyruvate carboxylase MQE35_07370 PF01381 Helix-turn-helix MQE35_07395 PF08279 HTH domain MQE35_07395 PF13280 WYL domain MQE35_07430 PF00873 AcrB/AcrD/AcrF family MQE35_07445 PF00196 Bacterial regulatory proteins, luxR family MQE35_07445 PF00072 Response regulator receiver domain MQE35_07450 PF07730 Histidine kinase MQE35_07450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MQE35_07460 PF03129 Anticodon binding domain MQE35_07470 PF00156 Phosphoribosyl transferase domain MQE35_07480 PF00795 Carbon-nitrogen hydrolase MQE35_07505 PF00593 TonB dependent receptor MQE35_07505 PF07715 TonB-dependent Receptor Plug Domain MQE35_07510 PF00342 Phosphoglucose isomerase MQE35_07515 PF08460 Bacterial SH3 domain MQE35_07515 PF01551 Peptidase family M23 MQE35_07520 PF03301 Tryptophan 2,3-dioxygenase MQE35_07530 PF01734 Patatin-like phospholipase MQE35_07535 PF08459 UvrC Helix-hairpin-helix N-terminal MQE35_07535 PF02151 UvrB/uvrC motif MQE35_07535 PF01541 GIY-YIG catalytic domain MQE35_07540 PF01812 5-formyltetrahydrofolate cyclo-ligase family MQE35_07545 PF01252 Signal peptidase (SPase) II MQE35_07590 PF08264 Anticodon-binding domain of tRNA MQE35_07590 PF00133 tRNA synthetases class I (I, L, M and V) MQE35_07595 PF07715 TonB-dependent Receptor Plug Domain MQE35_07595 PF00593 TonB dependent receptor MQE35_07600 PF02565 Recombination protein O C terminal MQE35_07600 PF11967 Recombination protein O N terminal MQE35_07605 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase MQE35_07605 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain MQE35_07700 PF01590 GAF domain MQE35_07700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MQE35_07700 PF00512 His Kinase A (phospho-acceptor) domain MQE35_07700 PF00360 Phytochrome region MQE35_07700 PF08446 PAS fold MQE35_07710 PF00072 Response regulator receiver domain MQE35_07730 PF05199 GMC oxidoreductase MQE35_07730 PF00732 GMC oxidoreductase MQE35_07740 PF03825 Nucleoside H+ symporter MQE35_07745 PF01408 Oxidoreductase family, NAD-binding Rossmann fold MQE35_07745 PF02894 Oxidoreductase family, C-terminal alpha/beta domain MQE35_07785 PF08340 Domain of unknown function (DUF1732) MQE35_07785 PF03755 YicC-like family, N-terminal region MQE35_07790 PF00625 Guanylate kinase MQE35_07795 PF01467 Cytidylyltransferase-like MQE35_07800 PF01476 LysM domain MQE35_07800 PF04972 BON domain MQE35_07810 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus MQE35_07810 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus MQE35_07815 PF00795 Carbon-nitrogen hydrolase MQE35_07815 PF00583 Acetyltransferase (GNAT) family MQE35_07820 PF00581 Rhodanese-like domain MQE35_07830 PF01266 FAD dependent oxidoreductase MQE35_07830 PF16901 C-terminal domain of alpha-glycerophosphate oxidase MQE35_07835 PF00370 FGGY family of carbohydrate kinases, N-terminal domain MQE35_07835 PF02782 FGGY family of carbohydrate kinases, C-terminal domain MQE35_07845 PF06832 Penicillin-Binding Protein C-terminus Family MQE35_07845 PF00912 Transglycosylase MQE35_07845 PF00905 Penicillin binding protein transpeptidase domain MQE35_07860 PF00207 Alpha-2-macroglobulin family MQE35_07860 PF07703 Alpha-2-macroglobulin bait region domain MQE35_07860 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain MQE35_07860 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain MQE35_07860 PF11974 Bacterial alpha-2-macroglobulin MG3 domain MQE35_07860 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain MQE35_07860 PF17962 Bacterial macroglobulin domain 6 MQE35_07860 PF01835 MG2 domain MQE35_07860 PF07678 A-macroglobulin TED domain MQE35_07865 PF01112 Asparaginase MQE35_07870 PF06052 3-hydroxyanthranilic acid dioxygenase MQE35_07890 PF13421 SPFH domain-Band 7 family MQE35_07900 PF00294 pfkB family carbohydrate kinase MQE35_07910 PF00106 short chain dehydrogenase MQE35_07915 PF07726 ATPase family associated with various cellular activities (AAA) MQE35_07915 PF17863 AAA lid domain MQE35_07920 PF01882 Protein of unknown function DUF58 MQE35_07930 PF07584 Aerotolerance regulator N-terminal MQE35_07930 PF00092 von Willebrand factor type A domain MQE35_07935 PF07584 Aerotolerance regulator N-terminal MQE35_07935 PF13519 von Willebrand factor type A domain MQE35_07960 PF01740 STAS domain MQE35_07960 PF00916 Sulfate permease family MQE35_07970 PF01740 STAS domain MQE35_07970 PF00916 Sulfate permease family MQE35_07975 PF00484 Carbonic anhydrase MQE35_08000 PF01551 Peptidase family M23 MQE35_08000 PF08460 Bacterial SH3 domain MQE35_08005 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain MQE35_08005 PF01409 tRNA synthetases class II core domain (F) MQE35_08015 PF00155 Aminotransferase class I and II MQE35_08030 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MQE35_08035 PF00873 AcrB/AcrD/AcrF family MQE35_08040 PF02321 Outer membrane efflux protein MQE35_08060 PF01928 CYTH domain MQE35_08070 PF11799 impB/mucB/samB family C-terminal domain MQE35_08070 PF00817 impB/mucB/samB family MQE35_08075 PF08267 Cobalamin-independent synthase, N-terminal domain MQE35_08075 PF01717 Cobalamin-independent synthase, Catalytic domain MQE35_08085 PF00224 Pyruvate kinase, barrel domain MQE35_08085 PF02887 Pyruvate kinase, alpha/beta domain MQE35_08095 PF00035 Double-stranded RNA binding motif MQE35_08095 PF14622 Ribonuclease-III-like MQE35_08100 PF00109 Beta-ketoacyl synthase, N-terminal domain MQE35_08100 PF02801 Beta-ketoacyl synthase, C-terminal domain MQE35_08105 PF00550 Phosphopantetheine attachment site MQE35_08110 PF00551 Formyl transferase MQE35_08115 PF00075 RNase H MQE35_08120 PF00294 pfkB family carbohydrate kinase MQE35_08125 PF00156 Phosphoribosyl transferase domain MQE35_08130 PF02777 Iron/manganese superoxide dismutases, C-terminal domain MQE35_08130 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain MQE35_08135 PF12705 PD-(D/E)XK nuclease superfamily MQE35_08135 PF00580 UvrD/REP helicase N-terminal domain MQE35_08135 PF13361 UvrD-like helicase C-terminal domain MQE35_08140 PF13505 Outer membrane protein beta-barrel domain MQE35_08140 PF00691 OmpA family MQE35_08175 PF03150 Di-haem cytochrome c peroxidase MQE35_08175 PF00034 Cytochrome c MQE35_08190 PF01554 MatE MQE35_08205 PF01242 6-pyruvoyl tetrahydropterin synthase MQE35_08225 PF02272 DHHA1 domain MQE35_08225 PF01368 DHH family MQE35_08225 PF10141 Single-strand DNA-specific exonuclease, C terminal domain MQE35_08225 PF17768 RecJ OB domain MQE35_08240 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MQE35_08250 PF00265 Thymidine kinase MQE35_08255 PF00842 Alanine racemase, C-terminal domain MQE35_08255 PF01168 Alanine racemase, N-terminal domain MQE35_08260 PF01741 Large-conductance mechanosensitive channel, MscL MQE35_08265 PF01118 Semialdehyde dehydrogenase, NAD binding domain MQE35_08265 PF02774 Semialdehyde dehydrogenase, dimerisation domain MQE35_08275 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain MQE35_08275 PF00326 Prolyl oligopeptidase family MQE35_08285 PF02152 Dihydroneopterin aldolase MQE35_08310 PF00749 tRNA synthetases class I (E and Q), catalytic domain MQE35_08310 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain MQE35_08325 PF00677 Lumazine binding domain MQE35_08330 PF04166 Pyridoxal phosphate biosynthetic protein PdxA MQE35_08340 PF01783 Ribosomal L32p protein family MQE35_08345 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III MQE35_08345 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal MQE35_08350 PF00364 Biotin-requiring enzyme MQE35_08355 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MQE35_08355 PF00289 Biotin carboxylase, N-terminal domain MQE35_08355 PF02785 Biotin carboxylase C-terminal domain MQE35_08370 PF00005 ABC transporter MQE35_08385 PF00248 Aldo/keto reductase family MQE35_08395 PF00248 Aldo/keto reductase family MQE35_08400 PF00144 Beta-lactamase MQE35_08405 PF08534 Redoxin MQE35_08425 PF01408 Oxidoreductase family, NAD-binding Rossmann fold MQE35_08425 PF02894 Oxidoreductase family, C-terminal alpha/beta domain MQE35_08435 PF16355 Domain of unknown function (DUF4982) MQE35_08435 PF00703 Glycosyl hydrolases family 2 MQE35_08435 PF02836 Glycosyl hydrolases family 2, TIM barrel domain MQE35_08435 PF02837 Glycosyl hydrolases family 2, sugar binding domain MQE35_08440 PF13673 Acetyltransferase (GNAT) domain MQE35_08455 PF01734 Patatin-like phospholipase MQE35_08460 PF13673 Acetyltransferase (GNAT) domain MQE35_08465 PF16916 Dimerisation domain of Zinc Transporter MQE35_08465 PF01545 Cation efflux family MQE35_08470 PF02502 Ribose/Galactose Isomerase MQE35_08480 PF00575 S1 RNA binding domain MQE35_08480 PF17876 Cold shock domain MQE35_08480 PF08206 Ribonuclease B OB domain MQE35_08480 PF00773 RNB domain MQE35_08510 PF13932 GidA associated domain MQE35_08510 PF01134 Glucose inhibited division protein A MQE35_08515 PF02130 Uncharacterized protein family UPF0054 MQE35_08525 PF00749 tRNA synthetases class I (E and Q), catalytic domain MQE35_08535 PF10282 Lactonase, 7-bladed beta-propeller MQE35_08540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MQE35_08540 PF07730 Histidine kinase MQE35_08560 PF00196 Bacterial regulatory proteins, luxR family MQE35_08560 PF00072 Response regulator receiver domain MQE35_08565 PF02001 Protein of unknown function DUF134 MQE35_08575 PF00925 GTP cyclohydrolase II MQE35_08575 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase MQE35_08585 PF03061 Thioesterase superfamily MQE35_08595 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MQE35_08595 PF07992 Pyridine nucleotide-disulphide oxidoreductase MQE35_08615 PF00132 Bacterial transferase hexapeptide (six repeats) MQE35_08615 PF14602 Hexapeptide repeat of succinyl-transferase MQE35_08615 PF12804 MobA-like NTP transferase domain MQE35_08620 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MQE35_08640 PF08000 Bacterial PH domain MQE35_08645 PF04471 Restriction endonuclease MQE35_08645 PF14338 Mrr N-terminal domain MQE35_08650 PF18766 SWI2/SNF2 ATPase MQE35_08650 PF11867 Domain of unknown function (DUF3387) MQE35_08650 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) MQE35_08695 PF00072 Response regulator receiver domain MQE35_08695 PF00196 Bacterial regulatory proteins, luxR family MQE35_08700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MQE35_08700 PF07730 Histidine kinase MQE35_08710 PF00593 TonB dependent receptor MQE35_08710 PF07715 TonB-dependent Receptor Plug Domain MQE35_08720 PF00872 Transposase, Mutator family MQE35_08765 PF02033 Ribosome-binding factor A MQE35_08770 PF02687 FtsX-like permease family MQE35_08770 PF12704 MacB-like periplasmic core domain MQE35_08775 PF00248 Aldo/keto reductase family MQE35_08780 PF00027 Cyclic nucleotide-binding domain MQE35_08780 PF13545 Crp-like helix-turn-helix domain MQE35_08785 PF01207 Dihydrouridine synthase (Dus) MQE35_08795 PF03144 Elongation factor Tu domain 2 MQE35_08795 PF00009 Elongation factor Tu GTP binding domain MQE35_08795 PF06421 GTP-binding protein LepA C-terminus MQE35_08795 PF00679 Elongation factor G C-terminus MQE35_08800 PF08323 Starch synthase catalytic domain MQE35_08800 PF00534 Glycosyl transferases group 1 MQE35_08805 PF00483 Nucleotidyl transferase MQE35_08810 PF00128 Alpha amylase, catalytic domain MQE35_08810 PF02806 Alpha amylase, C-terminal all-beta domain MQE35_08810 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) MQE35_08815 PF16338 Domain of unknown function (DUF4968) MQE35_08815 PF17137 Domain of unknown function (DUF5110) MQE35_08815 PF13802 Galactose mutarotase-like MQE35_08815 PF01055 Glycosyl hydrolases family 31 MQE35_08825 PF00999 Sodium/hydrogen exchanger family MQE35_08835 PF00082 Subtilase family MQE35_08850 PF00571 CBS domain MQE35_08855 PF00825 Ribonuclease P MQE35_08860 PF13180 PDZ domain MQE35_08860 PF03572 Peptidase family S41 MQE35_08865 PF09115 DNA polymerase III, delta subunit, C terminal MQE35_08870 PF00162 Phosphoglycerate kinase MQE35_08875 PF01476 LysM domain MQE35_08875 PF05257 CHAP domain MQE35_08885 PF02416 mttA/Hcf106 family MQE35_08890 PF01551 Peptidase family M23 MQE35_08900 PF00459 Inositol monophosphatase family MQE35_08915 PF01507 Phosphoadenosine phosphosulfate reductase family MQE35_08925 PF00009 Elongation factor Tu GTP binding domain MQE35_08940 PF16363 GDP-mannose 4,6 dehydratase MQE35_08945 PF00483 Nucleotidyl transferase MQE35_08950 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase MQE35_08955 PF04321 RmlD substrate binding domain MQE35_08960 PF02719 Polysaccharide biosynthesis protein MQE35_08965 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family MQE35_08970 PF02348 Cytidylyltransferase MQE35_08980 PF03102 NeuB family MQE35_08980 PF08666 SAF domain MQE35_09030 PF02397 Bacterial sugar transferase MQE35_09035 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain MQE35_09035 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain MQE35_09035 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain MQE35_09045 PF01370 NAD dependent epimerase/dehydratase family MQE35_09065 PF02843 Phosphoribosylglycinamide synthetase, C domain MQE35_09065 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain MQE35_09065 PF02844 Phosphoribosylglycinamide synthetase, N domain MQE35_09090 PF01075 Glycosyltransferase family 9 (heptosyltransferase) MQE35_09100 PF01966 HD domain MQE35_09110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MQE35_09110 PF03466 LysR substrate binding domain MQE35_09115 PF00141 Peroxidase MQE35_09135 PF13085 2Fe-2S iron-sulfur cluster binding domain MQE35_09145 PF00890 FAD binding domain MQE35_09145 PF02910 Fumarate reductase flavoprotein C-term MQE35_09155 PF05195 Aminopeptidase P, N-terminal domain MQE35_09155 PF00557 Metallopeptidase family M24 MQE35_09160 PF12697 Alpha/beta hydrolase family MQE35_09170 PF00586 AIR synthase related protein, N-terminal domain MQE35_09170 PF02769 AIR synthase related protein, C-terminal domain MQE35_09175 PF01521 Iron-sulphur cluster biosynthesis MQE35_09180 PF01458 Uncharacterized protein family (UPF0051) MQE35_09190 PF00005 ABC transporter MQE35_09195 PF01458 Uncharacterized protein family (UPF0051) MQE35_09205 PF00171 Aldehyde dehydrogenase family MQE35_09210 PF12833 Helix-turn-helix domain MQE35_09220 PF00266 Aminotransferase class-V MQE35_09235 PF02657 Fe-S metabolism associated domain MQE35_09240 PF01883 Iron-sulfur cluster assembly protein MQE35_09255 PF13167 GTP-binding GTPase N-terminal MQE35_09255 PF01926 50S ribosome-binding GTPase MQE35_09255 PF16360 GTP-binding GTPase Middle Region MQE35_09275 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain MQE35_09275 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain MQE35_09280 PF01595 Cyclin M transmembrane N-terminal domain MQE35_09280 PF00571 CBS domain MQE35_09290 PF00490 Delta-aminolevulinic acid dehydratase MQE35_09295 PF01218 Coproporphyrinogen III oxidase MQE35_09305 PF01208 Uroporphyrinogen decarboxylase (URO-D) MQE35_09315 PF03900 Porphobilinogen deaminase, C-terminal domain MQE35_09315 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain MQE35_09320 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain MQE35_09320 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain MQE35_09320 PF01488 Shikimate / quinate 5-dehydrogenase MQE35_09335 PF00005 ABC transporter MQE35_09335 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MQE35_09345 PF00082 Subtilase family MQE35_09345 PF02225 PA domain MQE35_09345 PF00746 LPXTG cell wall anchor motif MQE35_09345 PF06280 Fn3-like domain MQE35_09350 PF01144 Coenzyme A transferase MQE35_09355 PF01144 Coenzyme A transferase MQE35_09360 PF00912 Transglycosylase MQE35_09360 PF00905 Penicillin binding protein transpeptidase domain MQE35_09365 PF14109 GldH lipoprotein MQE35_09370 PF04468 PSP1 C-terminal conserved region MQE35_09380 PF01136 Peptidase family U32 MQE35_09390 PF00154 recA bacterial DNA recombination protein MQE35_09400 PF08281 Sigma-70, region 4 MQE35_09400 PF04542 Sigma-70 region 2 MQE35_09415 PF00579 tRNA synthetases class I (W and Y) MQE35_09420 PF00378 Enoyl-CoA hydratase/isomerase MQE35_09430 PF07694 5TMR of 5TMR-LYT MQE35_09430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MQE35_09430 PF06580 Histidine kinase MQE35_09435 PF04397 LytTr DNA-binding domain MQE35_09435 PF00072 Response regulator receiver domain MQE35_09450 PF02837 Glycosyl hydrolases family 2, sugar binding domain MQE35_09450 PF02836 Glycosyl hydrolases family 2, TIM barrel domain MQE35_09450 PF00703 Glycosyl hydrolases family 2 MQE35_09450 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 MQE35_09450 PF16355 Domain of unknown function (DUF4982) MQE35_09465 PF17820 PDZ domain MQE35_09465 PF02163 Peptidase family M50 MQE35_09470 PF02630 SCO1/SenC MQE35_09480 PF02421 Ferrous iron transport protein B MQE35_09480 PF07664 Ferrous iron transport protein B C terminus MQE35_09480 PF07670 Nucleoside recognition MQE35_09490 PF02535 ZIP Zinc transporter MQE35_09500 PF00593 TonB dependent receptor MQE35_09500 PF07715 TonB-dependent Receptor Plug Domain MQE35_09515 PF00348 Polyprenyl synthetase MQE35_09520 PF00440 Bacterial regulatory proteins, tetR family MQE35_09530 PF00529 HlyD membrane-fusion protein of T1SS MQE35_09530 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MQE35_09535 PF00873 AcrB/AcrD/AcrF family MQE35_09550 PF01336 OB-fold nucleic acid binding domain MQE35_09550 PF00152 tRNA synthetases class II (D, K and N) MQE35_09550 PF02938 GAD domain MQE35_09555 PF00654 Voltage gated chloride channel MQE35_09565 PF00313 'Cold-shock' DNA-binding domain MQE35_09570 PF14437 MafB19-like deaminase MQE35_09580 PF02780 Transketolase, C-terminal domain MQE35_09580 PF02779 Transketolase, pyrimidine binding domain MQE35_09580 PF13292 1-deoxy-D-xylulose-5-phosphate synthase MQE35_09590 PF13286 Phosphohydrolase-associated domain MQE35_09590 PF01966 HD domain MQE35_09595 PF00317 Ribonucleotide reductase, all-alpha domain MQE35_09595 PF02867 Ribonucleotide reductase, barrel domain MQE35_09595 PF03477 ATP cone domain MQE35_09610 PF01914 MarC family integral membrane protein MQE35_09625 PF13180 PDZ domain MQE35_09625 PF03572 Peptidase family S41 MQE35_09640 PF01556 DnaJ C terminal domain MQE35_09640 PF00226 DnaJ domain MQE35_09640 PF00684 DnaJ central domain MQE35_09645 PF06491 Disulphide isomerase MQE35_09650 PF00175 Oxidoreductase NAD-binding domain MQE35_09650 PF00111 2Fe-2S iron-sulfur cluster binding domain MQE35_09650 PF00970 Oxidoreductase FAD-binding domain MQE35_09660 PF00005 ABC transporter MQE35_09690 PF00119 ATP synthase A chain MQE35_09695 PF00137 ATP synthase subunit C MQE35_09700 PF00430 ATP synthase B/B' CF(0) MQE35_09705 PF00213 ATP synthase delta (OSCP) subunit MQE35_09710 PF00306 ATP synthase alpha/beta chain, C terminal domain MQE35_09710 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MQE35_09710 PF02874 ATP synthase alpha/beta family, beta-barrel domain MQE35_09715 PF00231 ATP synthase MQE35_09730 PF00692 dUTPase MQE35_09735 PF00483 Nucleotidyl transferase MQE35_09735 PF00132 Bacterial transferase hexapeptide (six repeats) MQE35_09755 PF03061 Thioesterase superfamily MQE35_09760 PF01915 Glycosyl hydrolase family 3 C-terminal domain MQE35_09760 PF00933 Glycosyl hydrolase family 3 N terminal domain MQE35_09760 PF14310 Fibronectin type III-like domain MQE35_09775 PF17782 DprA winged helix domain MQE35_09775 PF02481 DNA recombination-mediator protein A MQE35_09780 PF00512 His Kinase A (phospho-acceptor) domain MQE35_09780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MQE35_09780 PF00672 HAMP domain MQE35_09785 PF03653 Uncharacterised protein family (UPF0093) MQE35_09795 PF00762 Ferrochelatase MQE35_09805 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain MQE35_09805 PF12833 Helix-turn-helix domain MQE35_09805 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain MQE35_09805 PF02805 Metal binding domain of Ada MQE35_09810 PF07494 Two component regulator propeller MQE35_09810 PF07495 Y_Y_Y domain MQE35_09810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MQE35_09810 PF00512 His Kinase A (phospho-acceptor) domain MQE35_09810 PF12833 Helix-turn-helix domain MQE35_09810 PF00072 Response regulator receiver domain MQE35_09820 PF07715 TonB-dependent Receptor Plug Domain MQE35_09820 PF00593 TonB dependent receptor MQE35_09845 PF00459 Inositol monophosphatase family MQE35_09860 PF02417 Chromate transporter MQE35_09870 PF07980 SusD family MQE35_09870 PF14322 Starch-binding associating with outer membrane MQE35_09875 PF00593 TonB dependent receptor MQE35_09875 PF07715 TonB-dependent Receptor Plug Domain MQE35_09880 PF12833 Helix-turn-helix domain MQE35_09880 PF00512 His Kinase A (phospho-acceptor) domain MQE35_09880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MQE35_09880 PF07494 Two component regulator propeller MQE35_09880 PF00072 Response regulator receiver domain MQE35_09880 PF07495 Y_Y_Y domain MQE35_09885 PF00722 Glycosyl hydrolases family 16 MQE35_09885 PF02018 Carbohydrate binding domain MQE35_09895 PF00356 Bacterial regulatory proteins, lacI family MQE35_09895 PF13407 Periplasmic binding protein domain MQE35_09905 PF01636 Phosphotransferase enzyme family MQE35_09910 PF01370 NAD dependent epimerase/dehydratase family MQE35_09920 PF07690 Major Facilitator Superfamily MQE35_09925 PF02585 GlcNAc-PI de-N-acetylase MQE35_09925 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase MQE35_09930 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I MQE35_09930 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II MQE35_09930 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III MQE35_09930 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain MQE35_09935 PF03150 Di-haem cytochrome c peroxidase MQE35_09960 PF00196 Bacterial regulatory proteins, luxR family MQE35_09960 PF00072 Response regulator receiver domain MQE35_09970 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain MQE35_09970 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain MQE35_09980 PF12704 MacB-like periplasmic core domain MQE35_09980 PF02687 FtsX-like permease family MQE35_09980 PF00005 ABC transporter MQE35_09985 PF02687 FtsX-like permease family MQE35_09985 PF12704 MacB-like periplasmic core domain MQE35_09990 PF02687 FtsX-like permease family MQE35_09990 PF12704 MacB-like periplasmic core domain MQE35_09995 PF02687 FtsX-like permease family MQE35_09995 PF12704 MacB-like periplasmic core domain MQE35_10000 PF02687 FtsX-like permease family MQE35_10000 PF12704 MacB-like periplasmic core domain MQE35_10005 PF02687 FtsX-like permease family MQE35_10005 PF12704 MacB-like periplasmic core domain MQE35_10010 PF00005 ABC transporter MQE35_10020 PF02954 Bacterial regulatory protein, Fis family MQE35_10020 PF00072 Response regulator receiver domain MQE35_10020 PF00158 Sigma-54 interaction domain MQE35_10025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MQE35_10025 PF00989 PAS fold MQE35_10025 PF00512 His Kinase A (phospho-acceptor) domain MQE35_10050 PF00210 Ferritin-like domain MQE35_10070 PF01431 Peptidase family M13 MQE35_10070 PF05649 Peptidase family M13 MQE35_10090 PF00571 CBS domain MQE35_10090 PF01743 Poly A polymerase head domain MQE35_10115 PF00970 Oxidoreductase FAD-binding domain MQE35_10115 PF00111 2Fe-2S iron-sulfur cluster binding domain MQE35_10115 PF00175 Oxidoreductase NAD-binding domain MQE35_10155 PF00436 Single-strand binding protein family MQE35_10165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MQE35_10165 PF00529 HlyD membrane-fusion protein of T1SS MQE35_10170 PF00873 AcrB/AcrD/AcrF family MQE35_10175 PF02321 Outer membrane efflux protein MQE35_10180 PF01569 PAP2 superfamily MQE35_10185 PF16385 Domain of unknown function MQE35_10185 PF00884 Sulfatase MQE35_10195 PF00593 TonB dependent receptor MQE35_10195 PF07715 TonB-dependent Receptor Plug Domain MQE35_10210 PF00722 Glycosyl hydrolases family 16 MQE35_10215 PF00884 Sulfatase MQE35_10215 PF16347 Domain of unknown function (DUF4976) MQE35_10225 PF01055 Glycosyl hydrolases family 31 MQE35_10225 PF17137 Domain of unknown function (DUF5110) MQE35_10225 PF16338 Domain of unknown function (DUF4968) MQE35_10235 PF06865 Pyrimidine/purine nucleoside phosphorylase MQE35_10240 PF01381 Helix-turn-helix MQE35_10245 PF01408 Oxidoreductase family, NAD-binding Rossmann fold MQE35_10245 PF02894 Oxidoreductase family, C-terminal alpha/beta domain MQE35_10260 PF09334 tRNA synthetases class I (M) MQE35_10260 PF01588 Putative tRNA binding domain MQE35_10260 PF08264 Anticodon-binding domain of tRNA MQE35_10275 PF17676 LD-carboxypeptidase C-terminal domain MQE35_10275 PF02016 LD-carboxypeptidase N-terminal domain MQE35_10280 PF02021 Uncharacterised protein family UPF0102 MQE35_10290 PF02559 CarD-like/TRCF domain MQE35_10290 PF00270 DEAD/DEAH box helicase MQE35_10290 PF00271 Helicase conserved C-terminal domain MQE35_10290 PF03461 TRCF domain MQE35_10290 PF17757 UvrB interaction domain MQE35_10300 PF00886 Ribosomal protein S16 MQE35_10305 PF01782 RimM N-terminal domain MQE35_10310 PF05175 Methyltransferase small domain MQE35_10315 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MQE35_10315 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MQE35_10315 PF02770 Acyl-CoA dehydrogenase, middle domain MQE35_10320 PF13438 Domain of unknown function (DUF4113) MQE35_10320 PF00817 impB/mucB/samB family MQE35_10320 PF11799 impB/mucB/samB family C-terminal domain MQE35_10325 PF00717 Peptidase S24-like MQE35_10330 PF00210 Ferritin-like domain MQE35_10335 PF17674 HHH domain MQE35_10335 PF00575 S1 RNA binding domain MQE35_10335 PF09371 Tex-like protein N-terminal domain MQE35_10335 PF16921 Tex protein YqgF-like domain MQE35_10375 PF01042 Endoribonuclease L-PSP MQE35_10385 PF04205 FMN-binding domain MQE35_10390 PF00561 alpha/beta hydrolase fold MQE35_10420 PF05163 DinB family MQE35_10425 PF02567 Phenazine biosynthesis-like protein MQE35_10435 PF01209 ubiE/COQ5 methyltransferase family MQE35_10465 PF14572 Phosphoribosyl synthetase-associated domain MQE35_10465 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase MQE35_10470 PF01386 Ribosomal L25p family MQE35_10470 PF14693 Ribosomal protein TL5, C-terminal domain MQE35_10475 PF01195 Peptidyl-tRNA hydrolase MQE35_10480 PF00593 TonB dependent receptor MQE35_10480 PF07715 TonB-dependent Receptor Plug Domain MQE35_10495 PF07733 Bacterial DNA polymerase III alpha NTPase domain MQE35_10495 PF17657 Bacterial DNA polymerase III alpha subunit finger domain MQE35_10495 PF02811 PHP domain MQE35_10495 PF01336 OB-fold nucleic acid binding domain MQE35_10495 PF14579 Helix-hairpin-helix motif MQE35_10505 PF09308 LuxQ, periplasmic MQE35_10505 PF00512 His Kinase A (phospho-acceptor) domain MQE35_10505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MQE35_10505 PF00072 Response regulator receiver domain MQE35_10530 PF00696 Amino acid kinase family MQE35_10530 PF01842 ACT domain MQE35_10540 PF01451 Low molecular weight phosphotyrosine protein phosphatase MQE35_10565 PF12681 Glyoxalase-like domain MQE35_10610 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MQE35_10610 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MQE35_10615 PF01769 Divalent cation transporter MQE35_10615 PF00571 CBS domain MQE35_10615 PF03448 MgtE intracellular N domain MQE35_10620 PF00398 Ribosomal RNA adenine dimethylase MQE35_10635 PF02403 Seryl-tRNA synthetase N-terminal domain MQE35_10635 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MQE35_10645 PF01687 Riboflavin kinase MQE35_10645 PF06574 FAD synthetase MQE35_10650 PF07504 Fungalysin/Thermolysin Propeptide Motif MQE35_10650 PF02868 Thermolysin metallopeptidase, alpha-helical domain MQE35_10650 PF01447 Thermolysin metallopeptidase, catalytic domain MQE35_10650 PF01483 Proprotein convertase P-domain MQE35_10660 PF03372 Endonuclease/Exonuclease/phosphatase family MQE35_10665 PF13677 Membrane MotB of proton-channel complex MotA/MotB MQE35_10665 PF00691 OmpA family MQE35_10670 PF00248 Aldo/keto reductase family MQE35_10675 PF18073 Rubredoxin metal binding domain MQE35_10695 PF02261 Aspartate decarboxylase MQE35_10700 PF02569 Pantoate-beta-alanine ligase MQE35_10705 PF00534 Glycosyl transferases group 1 MQE35_10705 PF08323 Starch synthase catalytic domain MQE35_10715 PF01380 SIS domain MQE35_10730 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MQE35_10730 PF02874 ATP synthase alpha/beta family, beta-barrel domain MQE35_10735 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain MQE35_10740 PF00155 Aminotransferase class I and II MQE35_10760 PF00202 Aminotransferase class-III MQE35_10785 PF06968 Biotin and Thiamin Synthesis associated domain MQE35_10785 PF04055 Radical SAM superfamily MQE35_10795 PF02631 RecX family MQE35_10800 PF10150 Ribonuclease E/G family MQE35_10800 PF00575 S1 RNA binding domain MQE35_10805 PF00216 Bacterial DNA-binding protein MQE35_10810 PF00633 Helix-hairpin-helix motif MQE35_10810 PF00730 HhH-GPD superfamily base excision DNA repair protein MQE35_10810 PF14815 NUDIX domain MQE35_10815 PF00436 Single-strand binding protein family MQE35_10820 PF03471 Transporter associated domain MQE35_10820 PF00571 CBS domain MQE35_10850 PF00403 Heavy-metal-associated domain MQE35_10865 PF00829 Ribosomal prokaryotic L21 protein MQE35_10870 PF01016 Ribosomal L27 protein MQE35_10890 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) MQE35_10895 PF05221 S-adenosyl-L-homocysteine hydrolase MQE35_10895 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain MQE35_10910 PF04973 Nicotinamide mononucleotide transporter MQE35_10930 PF02954 Bacterial regulatory protein, Fis family MQE35_10930 PF00072 Response regulator receiver domain MQE35_10930 PF00158 Sigma-54 interaction domain MQE35_10935 PF01627 Hpt domain MQE35_10935 PF00512 His Kinase A (phospho-acceptor) domain MQE35_10935 PF00497 Bacterial extracellular solute-binding proteins, family 3 MQE35_10935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MQE35_10935 PF00072 Response regulator receiver domain MQE35_10955 PF01272 Transcription elongation factor, GreA/GreB, C-term MQE35_10955 PF03449 Transcription elongation factor, N-terminal MQE35_10960 PF01230 HIT domain MQE35_10970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MQE35_10970 PF00512 His Kinase A (phospho-acceptor) domain MQE35_10970 PF00989 PAS fold MQE35_10980 PF03588 Leucyl/phenylalanyl-tRNA protein transferase MQE35_10985 PF13673 Acetyltransferase (GNAT) domain MQE35_10985 PF13302 Acetyltransferase (GNAT) domain MQE35_10985 PF03352 Methyladenine glycosylase MQE35_10985 PF00117 Glutamine amidotransferase class-I MQE35_10985 PF00958 GMP synthase C terminal domain MQE35_10995 PF01509 TruB family pseudouridylate synthase (N terminal domain) MQE35_11000 PF02673 Bacitracin resistance protein BacA MQE35_11010 PF18075 FtsX extracellular domain MQE35_11025 PF09334 tRNA synthetases class I (M) MQE35_11025 PF13603 Leucyl-tRNA synthetase, Domain 2 MQE35_11025 PF08264 Anticodon-binding domain of tRNA MQE35_11040 PF04193 PQ loop repeat MQE35_11045 PF01262 Alanine dehydrogenase/PNT, C-terminal domain MQE35_11045 PF05222 Alanine dehydrogenase/PNT, N-terminal domain MQE35_11115 PF11429 Colicin D MQE35_11115 PF06958 S-type Pyocin MQE35_11115 PF03515 Colicin-like bacteriocin tRNase domain MQE35_11155 PF01037 Lrp/AsnC ligand binding domain MQE35_11155 PF13404 AsnC-type helix-turn-helix domain MQE35_11160 PF04241 Protein of unknown function (DUF423) MQE35_11175 PF00535 Glycosyl transferase family 2 MQE35_11180 PF01979 Amidohydrolase family MQE35_11195 PF00579 tRNA synthetases class I (W and Y) MQE35_11200 PF00581 Rhodanese-like domain MQE35_11215 PF00583 Acetyltransferase (GNAT) family MQE35_11260 PF03831 PhnA domain MQE35_11260 PF08274 PhnA Zinc-Ribbon MQE35_11265 PF00890 FAD binding domain MQE35_11265 PF02910 Fumarate reductase flavoprotein C-term MQE35_11270 PF02445 Quinolinate synthetase A protein MQE35_11285 PF01934 Protein of unknown function DUF86 MQE35_11305 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III MQE35_11305 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal MQE35_11310 PF02347 Glycine cleavage system P-protein MQE35_11350 PF00111 2Fe-2S iron-sulfur cluster binding domain MQE35_11355 PF01521 Iron-sulphur cluster biosynthesis MQE35_11355 PF01106 NifU-like domain MQE35_11360 PF10609 NUBPL iron-transfer P-loop NTPase MQE35_11360 PF01883 Iron-sulfur cluster assembly protein MQE35_11370 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain MQE35_11370 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain MQE35_11380 PF02390 Putative methyltransferase MQE35_11390 PF00989 PAS fold MQE35_11390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MQE35_11390 PF16736 Single Cache-like MQE35_11390 PF00512 His Kinase A (phospho-acceptor) domain MQE35_11395 PF00072 Response regulator receiver domain MQE35_11395 PF00486 Transcriptional regulatory protein, C terminal MQE35_11425 PF01432 Peptidase family M3 MQE35_11430 PF00731 AIR carboxylase MQE35_11445 PF02222 ATP-grasp domain MQE35_11445 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain MQE35_11455 PF01018 GTP1/OBG MQE35_11455 PF01926 50S ribosome-binding GTPase MQE35_11460 PF00326 Prolyl oligopeptidase family MQE35_11465 PF07694 5TMR of 5TMR-LYT MQE35_11465 PF06580 Histidine kinase MQE35_11465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MQE35_11470 PF00072 Response regulator receiver domain MQE35_11470 PF04397 LytTr DNA-binding domain MQE35_11480 PF01381 Helix-turn-helix MQE35_11485 PF04002 RadC-like JAB domain MQE35_11485 PF12826 Helix-hairpin-helix motif MQE35_11495 PF00691 OmpA family MQE35_11495 PF00223 Photosystem I psaA/psaB protein MQE35_11515 PF01225 Mur ligase family, catalytic domain MQE35_11515 PF02875 Mur ligase family, glutamate ligase domain MQE35_11515 PF08245 Mur ligase middle domain MQE35_11525 PF04002 RadC-like JAB domain MQE35_11535 PF13419 Haloacid dehalogenase-like hydrolase MQE35_11555 PF16193 AAA C-terminal domain MQE35_11555 PF00004 ATPase family associated with various cellular activities (AAA) MQE35_11555 PF12002 MgsA AAA+ ATPase C terminal MQE35_11560 PF01694 Rhomboid family MQE35_11565 PF00588 SpoU rRNA Methylase family MQE35_11565 PF08032 RNA 2'-O ribose methyltransferase substrate binding MQE35_11580 PF00593 TonB dependent receptor MQE35_11580 PF07715 TonB-dependent Receptor Plug Domain MQE35_11595 PF00593 TonB dependent receptor MQE35_11595 PF07715 TonB-dependent Receptor Plug Domain MQE35_11605 PF00593 TonB dependent receptor MQE35_11605 PF07715 TonB-dependent Receptor Plug Domain MQE35_11610 PF00164 Ribosomal protein S12/S23 MQE35_11615 PF00177 Ribosomal protein S7p/S5e MQE35_11620 PF14492 Elongation Factor G, domain II MQE35_11620 PF03764 Elongation factor G, domain IV MQE35_11620 PF00009 Elongation factor Tu GTP binding domain MQE35_11620 PF03144 Elongation factor Tu domain 2 MQE35_11620 PF00679 Elongation factor G C-terminus MQE35_11625 PF00338 Ribosomal protein S10p/S20e MQE35_11630 PF00297 Ribosomal protein L3 MQE35_11635 PF00573 Ribosomal protein L4/L1 family MQE35_11640 PF00276 Ribosomal protein L23 MQE35_11645 PF03947 Ribosomal Proteins L2, C-terminal domain MQE35_11645 PF00181 Ribosomal Proteins L2, RNA binding domain MQE35_11650 PF00203 Ribosomal protein S19 MQE35_11655 PF00237 Ribosomal protein L22p/L17e MQE35_11660 PF00189 Ribosomal protein S3, C-terminal domain MQE35_11660 PF07650 KH domain MQE35_11665 PF00252 Ribosomal protein L16p/L10e MQE35_11670 PF00831 Ribosomal L29 protein MQE35_11675 PF00366 Ribosomal protein S17 MQE35_11680 PF00238 Ribosomal protein L14p/L23e MQE35_11685 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 MQE35_11685 PF00467 KOW motif MQE35_11690 PF00673 ribosomal L5P family C-terminus MQE35_11690 PF00281 Ribosomal protein L5 MQE35_11695 PF00253 Ribosomal protein S14p/S29e MQE35_11700 PF00410 Ribosomal protein S8 MQE35_11705 PF00347 Ribosomal protein L6 MQE35_11710 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast MQE35_11715 PF00333 Ribosomal protein S5, N-terminal domain MQE35_11715 PF03719 Ribosomal protein S5, C-terminal domain MQE35_11720 PF00327 Ribosomal protein L30p/L7e MQE35_11725 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A MQE35_11730 PF00344 SecY translocase MQE35_11735 PF01176 Translation initiation factor 1A / IF-1 MQE35_11740 PF00444 Ribosomal protein L36 MQE35_11745 PF00416 Ribosomal protein S13/S18 MQE35_11750 PF00411 Ribosomal protein S11 MQE35_11755 PF01479 S4 domain MQE35_11755 PF00163 Ribosomal protein S4/S9 N-terminal domain MQE35_11760 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain MQE35_11760 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain MQE35_11760 PF01000 RNA polymerase Rpb3/RpoA insert domain MQE35_11765 PF01196 Ribosomal protein L17 MQE35_11775 PF00117 Glutamine amidotransferase class-I MQE35_11775 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain MQE35_11780 PF00113 Enolase, C-terminal TIM barrel domain MQE35_11780 PF03952 Enolase, N-terminal domain MQE35_11785 PF08323 Starch synthase catalytic domain MQE35_11785 PF00534 Glycosyl transferases group 1 MQE35_11790 PF00285 Citrate synthase, C-terminal domain MQE35_11800 PF00171 Aldehyde dehydrogenase family MQE35_11820 PF04055 Radical SAM superfamily MQE35_11825 PF05872 Bacterial protein of unknown function (DUF853) MQE35_11835 PF07883 Cupin domain MQE35_11835 PF02130 Uncharacterized protein family UPF0054 MQE35_11850 PF07676 WD40-like Beta Propeller Repeat MQE35_11870 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain MQE35_11870 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain MQE35_11875 PF02881 SRP54-type protein, helical bundle domain MQE35_11875 PF02978 Signal peptide binding domain MQE35_11875 PF00448 SRP54-type protein, GTPase domain MQE35_11905 PF07715 TonB-dependent Receptor Plug Domain MQE35_11905 PF00593 TonB dependent receptor MQE35_11920 PF03485 Arginyl tRNA synthetase N terminal domain MQE35_11920 PF05746 DALR anticodon binding domain MQE35_11920 PF00750 tRNA synthetases class I (R) MQE35_11940 PF02082 Transcriptional regulator MQE35_11950 PF00232 Glycosyl hydrolase family 1 MQE35_11965 PF01408 Oxidoreductase family, NAD-binding Rossmann fold MQE35_11965 PF02894 Oxidoreductase family, C-terminal alpha/beta domain MQE35_11980 PF02687 FtsX-like permease family MQE35_11980 PF12704 MacB-like periplasmic core domain MQE35_11985 PF07075 Protein of unknown function (DUF1343) MQE35_12000 PF08003 Protein of unknown function (DUF1698) MQE35_12025 PF12728 Helix-turn-helix domain MQE35_12030 PF01925 Sulfite exporter TauE/SafE MQE35_12035 PF00753 Metallo-beta-lactamase superfamily MQE35_12035 PF00581 Rhodanese-like domain MQE35_12040 PF00753 Metallo-beta-lactamase superfamily MQE35_12040 PF00581 Rhodanese-like domain MQE35_12050 PF10417 C-terminal domain of 1-Cys peroxiredoxin MQE35_12050 PF00578 AhpC/TSA family MQE35_12060 PF01654 Cytochrome bd terminal oxidase subunit I MQE35_12065 PF02322 Cytochrome bd terminal oxidase subunit II MQE35_12105 PF01979 Amidohydrolase family MQE35_12110 PF03606 C4-dicarboxylate anaerobic carrier MQE35_12125 PF04255 Protein of unknown function (DUF433) MQE35_12135 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MQE35_12155 PF00873 AcrB/AcrD/AcrF family MQE35_12170 PF07715 TonB-dependent Receptor Plug Domain MQE35_12170 PF00593 TonB dependent receptor MQE35_12175 PF14322 Starch-binding associating with outer membrane MQE35_12175 PF07980 SusD family MQE35_12180 PF06964 Alpha-L-arabinofuranosidase C-terminal domain MQE35_12185 PF16369 C-terminal lipocalin-like domain MQE35_12185 PF04616 Glycosyl hydrolases family 43 MQE35_12190 PF04616 Glycosyl hydrolases family 43 MQE35_12195 PF16355 Domain of unknown function (DUF4982) MQE35_12195 PF00703 Glycosyl hydrolases family 2 MQE35_12195 PF02836 Glycosyl hydrolases family 2, TIM barrel domain MQE35_12195 PF02837 Glycosyl hydrolases family 2, sugar binding domain MQE35_12200 PF07944 Beta-L-arabinofuranosidase, GH127 MQE35_12205 PF06964 Alpha-L-arabinofuranosidase C-terminal domain MQE35_12205 PF02018 Carbohydrate binding domain MQE35_12210 PF02782 FGGY family of carbohydrate kinases, C-terminal domain MQE35_12215 PF00596 Class II Aldolase and Adducin N-terminal domain MQE35_12220 PF11762 L-arabinose isomerase C-terminal domain MQE35_12220 PF02610 L-arabinose isomerase MQE35_12225 PF01263 Aldose 1-epimerase MQE35_12230 PF00474 Sodium:solute symporter family MQE35_12240 PF01381 Helix-turn-helix MQE35_12250 PF02080 TrkA-C domain MQE35_12250 PF06826 Predicted Permease Membrane Region MQE35_12280 PF06123 Inner membrane protein CreD MQE35_12320 PF07715 TonB-dependent Receptor Plug Domain MQE35_12320 PF07660 Secretin and TonB N terminus short domain MQE35_12320 PF00593 TonB dependent receptor MQE35_12330 PF00793 DAHP synthetase I family MQE35_12335 PF00679 Elongation factor G C-terminus MQE35_12335 PF00009 Elongation factor Tu GTP binding domain MQE35_12335 PF03144 Elongation factor Tu domain 2 MQE35_12335 PF14492 Elongation Factor G, domain II MQE35_12345 PF00005 ABC transporter MQE35_12360 PF07969 Amidohydrolase family MQE35_12370 PF00733 Asparagine synthase MQE35_12370 PF13537 Glutamine amidotransferase domain MQE35_12375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MQE35_12375 PF00204 DNA gyrase B MQE35_12375 PF00986 DNA gyrase B subunit, carboxyl terminus MQE35_12375 PF01751 Toprim domain MQE35_12395 PF00056 lactate/malate dehydrogenase, NAD binding domain MQE35_12395 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain MQE35_12400 PF07549 SecD/SecF GG Motif MQE35_12400 PF02355 Protein export membrane protein MQE35_12415 PF01790 Prolipoprotein diacylglyceryl transferase MQE35_12420 PF01809 Putative membrane protein insertion efficiency factor MQE35_12425 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system MQE35_12435 PF01406 tRNA synthetases class I (C) catalytic domain MQE35_12435 PF09190 DALR domain MQE35_12440 PF01227 GTP cyclohydrolase I MQE35_12455 PF03129 Anticodon binding domain MQE35_12455 PF09180 Prolyl-tRNA synthetase, C-terminal MQE35_12455 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MQE35_12470 PF01649 Ribosomal protein S20 MQE35_12475 PF00171 Aldehyde dehydrogenase family MQE35_12480 PF00696 Amino acid kinase family MQE35_12480 PF01472 PUA domain MQE35_12485 PF03807 NADP oxidoreductase coenzyme F420-dependent MQE35_12485 PF14748 Pyrroline-5-carboxylate reductase dimerisation MQE35_12495 PF00326 Prolyl oligopeptidase family MQE35_12495 PF07676 WD40-like Beta Propeller Repeat MQE35_12500 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MQE35_12500 PF07497 Rho termination factor, RNA-binding domain MQE35_12510 PF12850 Calcineurin-like phosphoesterase superfamily domain MQE35_12515 PF01416 tRNA pseudouridine synthase MQE35_12520 PF00664 ABC transporter transmembrane region MQE35_12520 PF00005 ABC transporter MQE35_12525 PF02457 DisA bacterial checkpoint controller nucleotide-binding MQE35_12530 PF00809 Pterin binding enzyme MQE35_12545 PF00528 Binding-protein-dependent transport system inner membrane component MQE35_12555 PF00121 Triosephosphate isomerase MQE35_12580 PF02899 Phage integrase, N-terminal SAM-like domain MQE35_12580 PF00589 Phage integrase family MQE35_12780 PF01807 CHC2 zinc finger MQE35_12780 PF08275 DNA primase catalytic core, N-terminal domain MQE35_12780 PF10410 DnaB-helicase binding domain of primase MQE35_12800 PF00196 Bacterial regulatory proteins, luxR family MQE35_12835 PF07470 Glycosyl Hydrolase Family 88 MQE35_12840 PF12833 Helix-turn-helix domain MQE35_12840 PF07494 Two component regulator propeller MQE35_12840 PF00072 Response regulator receiver domain MQE35_12840 PF07495 Y_Y_Y domain MQE35_12840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MQE35_12840 PF00512 His Kinase A (phospho-acceptor) domain MQE35_12845 PF00593 TonB dependent receptor MQE35_12845 PF07715 TonB-dependent Receptor Plug Domain MQE35_12865 PF00722 Glycosyl hydrolases family 16 MQE35_12885 PF12833 Helix-turn-helix domain MQE35_12885 PF02311 AraC-like ligand binding domain MQE35_12895 PF07715 TonB-dependent Receptor Plug Domain MQE35_12895 PF00593 TonB dependent receptor MQE35_12900 PF07980 SusD family MQE35_12900 PF14322 Starch-binding associating with outer membrane MQE35_12920 PF00150 Cellulase (glycosyl hydrolase family 5) MQE35_12920 PF00404 Dockerin type I domain MQE35_12935 PF13533 Biotin-lipoyl like MQE35_12940 PF00005 ABC transporter MQE35_12945 PF00005 ABC transporter MQE35_12960 PF00268 Ribonucleotide reductase, small chain MQE35_12965 PF03477 ATP cone domain MQE35_12965 PF02867 Ribonucleotide reductase, barrel domain MQE35_12965 PF00317 Ribonucleotide reductase, all-alpha domain MQE35_13030 PF00684 DnaJ central domain MQE35_13030 PF00226 DnaJ domain MQE35_13030 PF01556 DnaJ C terminal domain MQE35_13045 PF01551 Peptidase family M23 MQE35_13055 PF03135 CagE, TrbE, VirB family, component of type IV transporter system MQE35_13105 PF04542 Sigma-70 region 2 MQE35_13105 PF08281 Sigma-70, region 4 MQE35_13120 PF07715 TonB-dependent Receptor Plug Domain MQE35_13120 PF00593 TonB dependent receptor MQE35_13130 PF07715 TonB-dependent Receptor Plug Domain MQE35_13130 PF00593 TonB dependent receptor MQE35_13140 PF00578 AhpC/TSA family MQE35_13145 PF05193 Peptidase M16 inactive domain MQE35_13145 PF00675 Insulinase (Peptidase family M16) MQE35_13150 PF05193 Peptidase M16 inactive domain MQE35_13150 PF00675 Insulinase (Peptidase family M16) MQE35_13165 PF00248 Aldo/keto reductase family MQE35_13225 PF00872 Transposase, Mutator family MQE35_13255 PF02875 Mur ligase family, glutamate ligase domain MQE35_13255 PF08245 Mur ligase middle domain MQE35_13265 PF02472 Biopolymer transport protein ExbD/TolR MQE35_13270 PF01618 MotA/TolQ/ExbB proton channel family MQE35_13275 PF03600 Citrate transporter MQE35_13280 PF03702 Anhydro-N-acetylmuramic acid kinase MQE35_13285 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MQE35_13285 PF02770 Acyl-CoA dehydrogenase, middle domain MQE35_13285 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MQE35_13290 PF00310 Glutamine amidotransferases class-II MQE35_13290 PF04898 Glutamate synthase central domain MQE35_13290 PF01645 Conserved region in glutamate synthase MQE35_13290 PF01493 GXGXG motif MQE35_13295 PF07992 Pyridine nucleotide-disulphide oxidoreductase MQE35_13295 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster MQE35_13305 PF00535 Glycosyl transferase family 2 MQE35_13320 PF14322 Starch-binding associating with outer membrane MQE35_13320 PF07980 SusD family MQE35_13325 PF07715 TonB-dependent Receptor Plug Domain MQE35_13325 PF00593 TonB dependent receptor MQE35_13330 PF02311 AraC-like ligand binding domain MQE35_13330 PF12833 Helix-turn-helix domain MQE35_13370 PF00924 Mechanosensitive ion channel MQE35_13370 PF05552 Conserved TM helix MQE35_13385 PF07495 Y_Y_Y domain MQE35_13385 PF00072 Response regulator receiver domain MQE35_13385 PF12833 Helix-turn-helix domain MQE35_13385 PF00512 His Kinase A (phospho-acceptor) domain MQE35_13385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MQE35_13385 PF07494 Two component regulator propeller MQE35_13395 PF12833 Helix-turn-helix domain MQE35_13395 PF02311 AraC-like ligand binding domain MQE35_13400 PF02311 AraC-like ligand binding domain MQE35_13400 PF12833 Helix-turn-helix domain MQE35_13425 PF00106 short chain dehydrogenase MQE35_13455 PF01965 DJ-1/PfpI family MQE35_13460 PF02805 Metal binding domain of Ada MQE35_13460 PF12833 Helix-turn-helix domain MQE35_13465 PF00474 Sodium:solute symporter family MQE35_13470 PF04041 beta-1,4-mannooligosaccharide phosphorylase MQE35_13475 PF00593 TonB dependent receptor MQE35_13475 PF07715 TonB-dependent Receptor Plug Domain MQE35_13480 PF07980 SusD family MQE35_13480 PF14322 Starch-binding associating with outer membrane MQE35_13490 PF02469 Fasciclin domain MQE35_13495 PF00156 Phosphoribosyl transferase domain MQE35_13520 PF01699 Sodium/calcium exchanger protein MQE35_13525 PF00120 Glutamine synthetase, catalytic domain MQE35_13525 PF03951 Glutamine synthetase, beta-Grasp domain MQE35_13530 PF00120 Glutamine synthetase, catalytic domain MQE35_13530 PF18318 Glutamine synthetase C-terminal domain MQE35_13530 PF12437 Glutamine synthetase type III N terminal MQE35_13540 PF00586 AIR synthase related protein, N-terminal domain MQE35_13540 PF02769 AIR synthase related protein, C-terminal domain MQE35_13550 PF02424 ApbE family MQE35_13565 PF09992 Phosphodiester glycosidase MQE35_13580 PF02867 Ribonucleotide reductase, barrel domain MQE35_13580 PF03477 ATP cone domain MQE35_13580 PF00317 Ribonucleotide reductase, all-alpha domain MQE35_13585 PF00939 Sodium:sulfate symporter transmembrane region MQE35_13590 PF03462 PCRF domain MQE35_13590 PF00472 RF-1 domain MQE35_13595 PF00691 OmpA family MQE35_13595 PF13505 Outer membrane protein beta-barrel domain MQE35_13600 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family MQE35_13605 PF00872 Transposase, Mutator family MQE35_13615 PF01842 ACT domain MQE35_13615 PF00551 Formyl transferase MQE35_13630 PF07690 Major Facilitator Superfamily MQE35_13645 PF00909 Ammonium Transporter Family MQE35_13650 PF00543 Nitrogen regulatory protein P-II MQE35_13655 PF02537 CrcB-like protein, Camphor Resistance (CrcB) MQE35_13660 PF00575 S1 RNA binding domain MQE35_13660 PF03725 3' exoribonuclease family, domain 2 MQE35_13660 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain MQE35_13660 PF01138 3' exoribonuclease family, domain 1 MQE35_13660 PF00013 KH domain MQE35_13665 PF00312 Ribosomal protein S15 MQE35_13670 PF01039 Carboxyl transferase domain MQE35_13675 PF01116 Fructose-bisphosphate aldolase class-II MQE35_13685 PF00588 SpoU rRNA Methylase family MQE35_13685 PF08032 RNA 2'-O ribose methyltransferase substrate binding MQE35_13695 PF01209 ubiE/COQ5 methyltransferase family MQE35_13700 PF02080 TrkA-C domain MQE35_13700 PF02254 TrkA-N domain MQE35_13705 PF02386 Cation transport protein MQE35_13720 PF00722 Glycosyl hydrolases family 16 MQE35_13725 PF01915 Glycosyl hydrolase family 3 C-terminal domain MQE35_13725 PF00933 Glycosyl hydrolase family 3 N terminal domain MQE35_13725 PF14310 Fibronectin type III-like domain MQE35_13730 PF00722 Glycosyl hydrolases family 16 MQE35_13745 PF00593 TonB dependent receptor MQE35_13745 PF07715 TonB-dependent Receptor Plug Domain MQE35_13755 PF00041 Fibronectin type III domain MQE35_13755 PF00704 Glycosyl hydrolases family 18 MQE35_13765 PF04397 LytTr DNA-binding domain MQE35_13765 PF00072 Response regulator receiver domain MQE35_13770 PF07694 5TMR of 5TMR-LYT MQE35_13770 PF13492 GAF domain MQE35_13770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MQE35_13770 PF06580 Histidine kinase MQE35_13775 PF07715 TonB-dependent Receptor Plug Domain MQE35_13775 PF00593 TonB dependent receptor MQE35_13785 PF02585 GlcNAc-PI de-N-acetylase MQE35_13785 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase MQE35_13795 PF00728 Glycosyl hydrolase family 20, catalytic domain MQE35_13795 PF07691 PA14 domain MQE35_13795 PF02838 Glycosyl hydrolase family 20, domain 2 MQE35_13820 PF00571 CBS domain MQE35_13830 PF00834 Ribulose-phosphate 3 epimerase family MQE35_13835 PF04545 Sigma-70, region 4 MQE35_13835 PF00140 Sigma-70 factor, region 1.2 MQE35_13835 PF03979 Sigma-70 factor, region 1.1 MQE35_13835 PF04542 Sigma-70 region 2 MQE35_13835 PF04539 Sigma-70 region 3 MQE35_13840 PF01467 Cytidylyltransferase-like MQE35_13845 PF07478 D-ala D-ala ligase C-terminus MQE35_13845 PF01820 D-ala D-ala ligase N-terminus MQE35_13865 PF00849 RNA pseudouridylate synthase MQE35_13865 PF01479 S4 domain MQE35_13875 PF02525 Flavodoxin-like fold MQE35_13920 PF03883 Peroxide stress protein YaaA MQE35_13930 PF04397 LytTr DNA-binding domain MQE35_13930 PF00072 Response regulator receiver domain MQE35_13935 PF13492 GAF domain MQE35_13935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MQE35_13935 PF06580 Histidine kinase MQE35_13935 PF07694 5TMR of 5TMR-LYT MQE35_13955 PF17070 30S ribosomal protein Thx MQE35_13965 PF00391 PEP-utilising enzyme, mobile domain MQE35_13965 PF00224 Pyruvate kinase, barrel domain MQE35_13965 PF02887 Pyruvate kinase, alpha/beta domain MQE35_13980 PF00144 Beta-lactamase MQE35_13985 PF00290 Tryptophan synthase alpha chain MQE35_13990 PF00291 Pyridoxal-phosphate dependent enzyme MQE35_13995 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase MQE35_14000 PF00218 Indole-3-glycerol phosphate synthase MQE35_14005 PF02885 Glycosyl transferase family, helical bundle domain MQE35_14005 PF00591 Glycosyl transferase family, a/b domain MQE35_14010 PF00117 Glutamine amidotransferase class-I MQE35_14010 PF00591 Glycosyl transferase family, a/b domain MQE35_14010 PF02885 Glycosyl transferase family, helical bundle domain MQE35_14015 PF04715 Anthranilate synthase component I, N terminal region MQE35_14015 PF00425 chorismate binding enzyme MQE35_14025 PF00881 Nitroreductase family MQE35_14030 PF01047 MarR family MQE35_14035 PF00578 AhpC/TSA family MQE35_14045 PF00581 Rhodanese-like domain MQE35_14060 PF07715 TonB-dependent Receptor Plug Domain MQE35_14060 PF00593 TonB dependent receptor MQE35_14065 PF07883 Cupin domain MQE35_14065 PF12833 Helix-turn-helix domain MQE35_14080 PF02254 TrkA-N domain MQE35_14080 PF02080 TrkA-C domain MQE35_14085 PF01235 Sodium:alanine symporter family MQE35_14095 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MQE35_14095 PF02770 Acyl-CoA dehydrogenase, middle domain MQE35_14095 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MQE35_14105 PF02806 Alpha amylase, C-terminal all-beta domain MQE35_14105 PF00128 Alpha amylase, catalytic domain MQE35_14110 PF01165 Ribosomal protein S21 MQE35_14115 PF02899 Phage integrase, N-terminal SAM-like domain MQE35_14115 PF00589 Phage integrase family MQE35_14120 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein MQE35_14120 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus MQE35_14140 PF03143 Elongation factor Tu C-terminal domain MQE35_14140 PF03144 Elongation factor Tu domain 2 MQE35_14140 PF00009 Elongation factor Tu GTP binding domain MQE35_14155 PF02357 Transcription termination factor nusG MQE35_14155 PF00467 KOW motif MQE35_14160 PF00298 Ribosomal protein L11, RNA binding domain MQE35_14160 PF03946 Ribosomal protein L11, N-terminal domain MQE35_14165 PF00687 Ribosomal protein L1p/L10e family MQE35_14170 PF00466 Ribosomal protein L10 MQE35_14175 PF00542 Ribosomal protein L7/L12 C-terminal domain MQE35_14175 PF16320 Ribosomal protein L7/L12 dimerisation domain MQE35_14180 PF04560 RNA polymerase Rpb2, domain 7 MQE35_14180 PF00562 RNA polymerase Rpb2, domain 6 MQE35_14180 PF10385 RNA polymerase beta subunit external 1 domain MQE35_14180 PF04565 RNA polymerase Rpb2, domain 3 MQE35_14180 PF04563 RNA polymerase beta subunit MQE35_14180 PF04561 RNA polymerase Rpb2, domain 2 MQE35_14185 PF04983 RNA polymerase Rpb1, domain 3 MQE35_14185 PF04998 RNA polymerase Rpb1, domain 5 MQE35_14185 PF05000 RNA polymerase Rpb1, domain 4 MQE35_14185 PF00623 RNA polymerase Rpb1, domain 2 MQE35_14185 PF04997 RNA polymerase Rpb1, domain 1 MQE35_14195 PF16658 Class II release factor RF3, C-terminal domain MQE35_14195 PF03144 Elongation factor Tu domain 2 MQE35_14195 PF00009 Elongation factor Tu GTP binding domain MQE35_14200 PF17961 Bacterial Ig domain MQE35_14200 PF00746 LPXTG cell wall anchor motif MQE35_14200 PF17210 SdrD B-like domain MQE35_14200 PF10425 C-terminus of bacterial fibrinogen-binding adhesin MQE35_14200 PF04650 YSIRK type signal peptide MQE35_14210 PF07691 PA14 domain MQE35_14210 PF12791 Anti-sigma factor N-terminus MQE35_14230 PF00223 Photosystem I psaA/psaB protein MQE35_14230 PF00691 OmpA family MQE35_14235 PF02954 Bacterial regulatory protein, Fis family MQE35_14235 PF00072 Response regulator receiver domain MQE35_14235 PF00158 Sigma-54 interaction domain MQE35_14245 PF07730 Histidine kinase MQE35_14245 PF17200 Single Cache domain 2 MQE35_14250 PF00072 Response regulator receiver domain MQE35_14250 PF00196 Bacterial regulatory proteins, luxR family MQE35_14255 PF00293 NUDIX domain MQE35_14265 PF00578 AhpC/TSA family MQE35_14270 PF01238 Phosphomannose isomerase type I MQE35_14290 PF02463 RecF/RecN/SMC N terminal domain MQE35_14300 PF00885 6,7-dimethyl-8-ribityllumazine synthase MQE35_14310 PF08676 MutL C terminal dimerisation domain MQE35_14310 PF01119 DNA mismatch repair protein, C-terminal domain MQE35_14355 PF13784 Fic/DOC family N-terminal MQE35_14355 PF02661 Fic/DOC family MQE35_14385 PF10502 Signal peptidase, peptidase S26 MQE35_14390 PF05173 Dihydrodipicolinate reductase, C-terminus MQE35_14390 PF01113 Dihydrodipicolinate reductase, N-terminus MQE35_14400 PF17762 HTH domain found in ParB protein MQE35_14400 PF02195 ParB-like nuclease domain MQE35_14405 PF13614 AAA domain MQE35_14415 PF01642 Methylmalonyl-CoA mutase MQE35_14415 PF02310 B12 binding domain MQE35_14420 PF01642 Methylmalonyl-CoA mutase MQE35_14420 PF02310 B12 binding domain MQE35_14430 PF00485 Phosphoribulokinase / Uridine kinase family MQE35_14435 PF13442 Cytochrome C oxidase, cbb3-type, subunit III MQE35_14435 PF00034 Cytochrome c MQE35_14440 PF07995 Glucose / Sorbosone dehydrogenase MQE35_14480 PF02311 AraC-like ligand binding domain MQE35_14480 PF12833 Helix-turn-helix domain MQE35_14500 PF03473 MOSC domain MQE35_14500 PF03475 3-alpha domain MQE35_14505 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD MQE35_14510 PF12867 DinB superfamily MQE35_14525 PF03976 Polyphosphate kinase 2 (PPK2) MQE35_14530 PF04389 Peptidase family M28 MQE35_14530 PF04151 Bacterial pre-peptidase C-terminal domain MQE35_14575 PF00106 short chain dehydrogenase MQE35_14580 PF00923 Transaldolase/Fructose-6-phosphate aldolase MQE35_14585 PF12833 Helix-turn-helix domain MQE35_14590 PF01339 CheB methylesterase MQE35_14590 PF00072 Response regulator receiver domain MQE35_14595 PF00360 Phytochrome region MQE35_14595 PF00512 His Kinase A (phospho-acceptor) domain MQE35_14595 PF08446 PAS fold MQE35_14595 PF01590 GAF domain MQE35_14595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MQE35_14610 PF00005 ABC transporter MQE35_14610 PF12848 ABC transporter MQE35_14635 PF03483 B3/4 domain MQE35_14635 PF03484 tRNA synthetase B5 domain MQE35_14635 PF03147 Ferredoxin-fold anticodon binding domain MQE35_14635 PF01588 Putative tRNA binding domain MQE35_14635 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain MQE35_14645 PF04616 Glycosyl hydrolases family 43 MQE35_14645 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain MQE35_14655 PF00183 Hsp90 protein MQE35_14660 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III MQE35_14660 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal MQE35_14665 PF00871 Acetokinase family MQE35_14670 PF07085 DRTGG domain MQE35_14670 PF01515 Phosphate acetyl/butaryl transferase MQE35_14685 PF00474 Sodium:solute symporter family MQE35_14690 PF02132 RecR protein MQE35_14690 PF13662 Toprim domain MQE35_14695 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) MQE35_14695 PF00364 Biotin-requiring enzyme MQE35_14695 PF02817 e3 binding domain MQE35_14700 PF00929 Exonuclease MQE35_14705 PF01557 Fumarylacetoacetate (FAA) hydrolase family MQE35_14715 PF00994 Probable molybdopterin binding domain MQE35_14715 PF02464 Competence-damaged protein MQE35_14715 PF18146 Damage-inducible protein CinA KH domain MQE35_14720 PF00830 Ribosomal L28 family MQE35_14725 PF00471 Ribosomal protein L33 MQE35_14735 PF02881 SRP54-type protein, helical bundle domain MQE35_14735 PF00448 SRP54-type protein, GTPase domain MQE35_14740 PF01425 Amidase MQE35_14750 PF00664 ABC transporter transmembrane region MQE35_14750 PF00005 ABC transporter MQE35_14755 PF01029 NusB family MQE35_14765 PF02699 Preprotein translocase subunit MQE35_14780 PF07971 Glycosyl hydrolase family 92 MQE35_14780 PF17678 Glycosyl hydrolase family 92 N-terminal domain MQE35_14785 PF01565 FAD binding domain MQE35_14785 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain MQE35_14790 PF00155 Aminotransferase class I and II MQE35_14805 PF08264 Anticodon-binding domain of tRNA MQE35_14805 PF00133 tRNA synthetases class I (I, L, M and V) MQE35_14805 PF10458 Valyl tRNA synthetase tRNA binding arm MQE35_14815 PF02666 Phosphatidylserine decarboxylase MQE35_14830 PF17862 AAA+ lid domain MQE35_14830 PF01434 Peptidase family M41 MQE35_14830 PF00004 ATPase family associated with various cellular activities (AAA) MQE35_14840 PF02237 Biotin protein ligase C terminal domain MQE35_14840 PF03099 Biotin/lipoate A/B protein ligase family MQE35_14840 PF08279 HTH domain MQE35_14850 PF00156 Phosphoribosyl transferase domain MQE35_14855 PF00293 NUDIX domain MQE35_14860 PF00916 Sulfate permease family MQE35_14860 PF01740 STAS domain MQE35_14880 PF08669 Glycine cleavage T-protein C-terminal barrel domain MQE35_14880 PF01571 Aminomethyltransferase folate-binding domain MQE35_14885 PF04960 Glutaminase MQE35_14895 PF01329 Pterin 4 alpha carbinolamine dehydratase MQE35_14900 PF01709 Transcriptional regulator MQE35_14910 PF08281 Sigma-70, region 4 MQE35_14910 PF04542 Sigma-70 region 2 MQE35_14920 PF00465 Iron-containing alcohol dehydrogenase MQE35_14930 PF02348 Cytidylyltransferase MQE35_14940 PF13344 Haloacid dehalogenase-like hydrolase MQE35_14950 PF00120 Glutamine synthetase, catalytic domain MQE35_14955 PF03193 RsgA GTPase MQE35_14960 PF14490 Helix-hairpin-helix containing domain MQE35_14960 PF13538 UvrD-like helicase C-terminal domain MQE35_14960 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain MQE35_14985 PF00293 NUDIX domain MQE35_15010 PF00593 TonB dependent receptor MQE35_15010 PF07715 TonB-dependent Receptor Plug Domain MQE35_15015 PF07980 SusD family MQE35_15015 PF14322 Starch-binding associating with outer membrane MQE35_15030 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain MQE35_15030 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain MQE35_15035 PF08442 ATP-grasp domain MQE35_15035 PF00549 CoA-ligase MQE35_15045 PF01507 Phosphoadenosine phosphosulfate reductase family MQE35_15060 PF14310 Fibronectin type III-like domain MQE35_15060 PF00933 Glycosyl hydrolase family 3 N terminal domain MQE35_15060 PF01915 Glycosyl hydrolase family 3 C-terminal domain MQE35_15070 PF00011 Hsp20/alpha crystallin family MQE35_15090 PF00271 Helicase conserved C-terminal domain MQE35_15090 PF04851 Type III restriction enzyme, res subunit MQE35_15090 PF12344 Ultra-violet resistance protein B MQE35_15090 PF17757 UvrB interaction domain MQE35_15105 PF00005 ABC transporter MQE35_15115 PF00534 Glycosyl transferases group 1 MQE35_15115 PF13439 Glycosyltransferase Family 4 MQE35_15190 PF02397 Bacterial sugar transferase MQE35_15200 PF13477 Glycosyl transferase 4-like MQE35_15200 PF00534 Glycosyl transferases group 1 MQE35_15210 PF00535 Glycosyl transferase family 2 MQE35_15225 PF13439 Glycosyltransferase Family 4 MQE35_15225 PF00534 Glycosyl transferases group 1 MQE35_15230 PF00535 Glycosyl transferase family 2 MQE35_15240 PF01370 NAD dependent epimerase/dehydratase family MQE35_15245 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain MQE35_15245 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain MQE35_15245 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain MQE35_15250 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family MQE35_15255 PF02719 Polysaccharide biosynthesis protein MQE35_15265 PF13614 AAA domain MQE35_15265 PF13807 G-rich domain on putative tyrosine kinase MQE35_15265 PF02706 Chain length determinant protein MQE35_15285 PF00011 Hsp20/alpha crystallin family MQE35_15335 PF01455 HupF/HypC family MQE35_15340 PF02492 CobW/HypB/UreG, nucleotide-binding domain MQE35_15350 PF00374 Nickel-dependent hydrogenase MQE35_15355 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region MQE35_15360 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit MQE35_15360 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region MQE35_15365 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA MQE35_15370 PF00708 Acylphosphatase MQE35_15370 PF17788 HypF Kae1-like domain MQE35_15370 PF01300 Telomere recombination MQE35_15370 PF07503 HypF finger MQE35_15375 PF01924 Hydrogenase formation hypA family MQE35_15380 PF02769 AIR synthase related protein, C-terminal domain MQE35_15380 PF00586 AIR synthase related protein, N-terminal domain MQE35_15395 PF01274 Malate synthase MQE35_15400 PF00463 Isocitrate lyase family MQE35_15420 PF17657 Bacterial DNA polymerase III alpha subunit finger domain MQE35_15420 PF00929 Exonuclease MQE35_15420 PF02811 PHP domain MQE35_15420 PF07733 Bacterial DNA polymerase III alpha NTPase domain MQE35_15420 PF11490 DNA polymerase III polC-type N-terminus II MQE35_15420 PF14579 Helix-hairpin-helix motif MQE35_15435 PF16177 Acetyl-coenzyme A synthetase N-terminus MQE35_15435 PF13193 AMP-binding enzyme C-terminal domain MQE35_15435 PF00501 AMP-binding enzyme MQE35_15440 PF00072 Response regulator receiver domain MQE35_15440 PF00486 Transcriptional regulatory protein, C terminal MQE35_15445 PF00512 His Kinase A (phospho-acceptor) domain MQE35_15445 PF00672 HAMP domain MQE35_15445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MQE35_15445 PF18698 Histidine kinase sensor domain MQE35_15445 PF00989 PAS fold MQE35_15450 PF00474 Sodium:solute symporter family MQE35_15490 PF00106 short chain dehydrogenase MQE35_15500 PF12833 Helix-turn-helix domain MQE35_15505 PF03572 Peptidase family S41 MQE35_15505 PF14685 Tricorn protease PDZ domain MQE35_15505 PF07676 WD40-like Beta Propeller Repeat MQE35_15505 PF14684 Tricorn protease C1 domain MQE35_15515 PF07715 TonB-dependent Receptor Plug Domain MQE35_15515 PF00593 TonB dependent receptor MQE35_15535 PF07715 TonB-dependent Receptor Plug Domain MQE35_15535 PF00593 TonB dependent receptor MQE35_15540 PF14322 Starch-binding associating with outer membrane MQE35_15540 PF07980 SusD family MQE35_15555 PF01915 Glycosyl hydrolase family 3 C-terminal domain MQE35_15555 PF00933 Glycosyl hydrolase family 3 N terminal domain MQE35_15555 PF14310 Fibronectin type III-like domain MQE35_15565 PF00884 Sulfatase MQE35_15565 PF16347 Domain of unknown function (DUF4976) MQE35_15580 PF16355 Domain of unknown function (DUF4982) MQE35_15580 PF00703 Glycosyl hydrolases family 2 MQE35_15580 PF02836 Glycosyl hydrolases family 2, TIM barrel domain MQE35_15580 PF02837 Glycosyl hydrolases family 2, sugar binding domain MQE35_15590 PF00365 Phosphofructokinase MQE35_15610 PF01594 AI-2E family transporter MQE35_15620 PF04452 RNA methyltransferase MQE35_15625 PF00814 Glycoprotease family MQE35_15635 PF00365 Phosphofructokinase MQE35_15640 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain MQE35_15640 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain MQE35_15650 PF08328 Adenylosuccinate lyase C-terminal MQE35_15650 PF00206 Lyase MQE35_15665 PF02146 Sir2 family MQE35_15670 PF00588 SpoU rRNA Methylase family MQE35_15680 PF03880 DbpA RNA binding domain MQE35_15680 PF00270 DEAD/DEAH box helicase MQE35_15680 PF00271 Helicase conserved C-terminal domain MQE35_15685 PF01725 Ham1 family MQE35_15690 PF00728 Glycosyl hydrolase family 20, catalytic domain MQE35_15690 PF02838 Glycosyl hydrolase family 20, domain 2 MQE35_15695 PF08241 Methyltransferase domain MQE35_15705 PF02581 Thiamine monophosphate synthase MQE35_15705 PF17792 ThiD2 family MQE35_15715 PF02590 Predicted SPOUT methyltransferase MQE35_15720 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain MQE35_15720 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain MQE35_15725 PF03631 Virulence factor BrkB MQE35_15735 PF04851 Type III restriction enzyme, res subunit MQE35_15735 PF00271 Helicase conserved C-terminal domain MQE35_15735 PF18074 Primosomal protein N C-terminal domain MQE35_15735 PF17764 3′ DNA-binding domain (3′BD) MQE35_15735 PF18319 PriA DNA helicase Cys-rich region (CRR) domain MQE35_15740 PF04397 LytTr DNA-binding domain MQE35_15740 PF00072 Response regulator receiver domain MQE35_15745 PF01250 Ribosomal protein S6 MQE35_15750 PF01084 Ribosomal protein S18 MQE35_15755 PF03948 Ribosomal protein L9, C-terminal domain MQE35_15755 PF01281 Ribosomal protein L9, N-terminal domain MQE35_15760 PF00593 TonB dependent receptor MQE35_15770 PF03129 Anticodon binding domain MQE35_15770 PF13393 Histidyl-tRNA synthetase MQE35_15775 PF00232 Glycosyl hydrolase family 1 MQE35_15790 PF01541 GIY-YIG catalytic domain MQE35_15790 PF00929 Exonuclease MQE35_15800 PF00293 NUDIX domain MQE35_15800 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain MQE35_15800 PF09297 NADH pyrophosphatase zinc ribbon domain MQE35_15805 PF05343 M42 glutamyl aminopeptidase MQE35_15840 PF03006 Haemolysin-III related MQE35_15855 PF01170 Putative RNA methylase family UPF0020 MQE35_15855 PF02926 THUMP domain MQE35_15870 PF01938 TRAM domain MQE35_15870 PF05958 tRNA (Uracil-5-)-methyltransferase MQE35_15880 PF13580 SIS domain MQE35_15885 PF00005 ABC transporter MQE35_15885 PF12848 ABC transporter MQE35_15885 PF16326 ABC transporter C-terminal domain MQE35_15905 PF00005 ABC transporter MQE35_15905 PF12399 Branched-chain amino acid ATP-binding cassette transporter MQE35_15915 PF00902 Sec-independent protein translocase protein (TatC) MQE35_15920 PF00571 CBS domain MQE35_15920 PF01380 SIS domain MQE35_15925 PF00270 DEAD/DEAH box helicase MQE35_15925 PF00570 HRDC domain MQE35_15925 PF00271 Helicase conserved C-terminal domain MQE35_15925 PF16124 RecQ zinc-binding MQE35_15925 PF09382 RQC domain MQE35_15935 PF16499 Alpha galactosidase A MQE35_15935 PF17801 Alpha galactosidase C-terminal beta sandwich domain MQE35_15940 PF04794 YdjC-like protein MQE35_15945 PF00593 TonB dependent receptor MQE35_15945 PF07715 TonB-dependent Receptor Plug Domain MQE35_15960 PF07694 5TMR of 5TMR-LYT MQE35_15960 PF06580 Histidine kinase MQE35_15960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MQE35_15975 PF00072 Response regulator receiver domain MQE35_15975 PF04397 LytTr DNA-binding domain MQE35_15980 PF00156 Phosphoribosyl transferase domain MQE35_15985 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain MQE35_15985 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain MQE35_15995 PF00753 Metallo-beta-lactamase superfamily MQE35_15995 PF12706 Beta-lactamase superfamily domain MQE35_16000 PF01243 Pyridoxamine 5'-phosphate oxidase MQE35_16000 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region MQE35_16010 PF17941 Polyphosphate kinase C-terminal domain 1 MQE35_16010 PF13090 Polyphosphate kinase C-terminal domain 2 MQE35_16010 PF02503 Polyphosphate kinase middle domain MQE35_16010 PF13089 Polyphosphate kinase N-terminal domain MQE35_16015 PF02541 Ppx/GppA phosphatase family MQE35_16025 PF12169 DNA polymerase III subunits gamma and tau domain III MQE35_16040 PF01256 Carbohydrate kinase MQE35_16040 PF03853 YjeF-related protein N-terminus MQE35_16045 PF03447 Homoserine dehydrogenase, NAD binding domain MQE35_16045 PF00742 Homoserine dehydrogenase MQE35_16045 PF01842 ACT domain MQE35_16045 PF00696 Amino acid kinase family MQE35_16045 PF13840 ACT domain MQE35_16050 PF08544 GHMP kinases C terminal MQE35_16050 PF00288 GHMP kinases N terminal domain MQE35_16055 PF00291 Pyridoxal-phosphate dependent enzyme MQE35_16055 PF14821 Threonine synthase N terminus MQE35_16095 PF04542 Sigma-70 region 2 MQE35_16095 PF08281 Sigma-70, region 4 MQE35_16100 PF01408 Oxidoreductase family, NAD-binding Rossmann fold MQE35_16100 PF02894 Oxidoreductase family, C-terminal alpha/beta domain MQE35_16120 PF02545 Maf-like protein MQE35_16135 PF01578 Cytochrome C assembly protein MQE35_16135 PF05140 ResB-like family MQE35_16145 PF01554 MatE MQE35_16150 PF00255 Glutathione peroxidase MQE35_16155 PF02585 GlcNAc-PI de-N-acetylase MQE35_16165 PF02225 PA domain MQE35_16165 PF04389 Peptidase family M28 MQE35_16185 PF00593 TonB dependent receptor MQE35_16185 PF07715 TonB-dependent Receptor Plug Domain MQE35_16200 PF03009 Glycerophosphoryl diester phosphodiesterase family MQE35_16215 PF07980 SusD family MQE35_16215 PF14322 Starch-binding associating with outer membrane MQE35_16220 PF07715 TonB-dependent Receptor Plug Domain MQE35_16220 PF00593 TonB dependent receptor MQE35_16250 PF00034 Cytochrome c MQE35_16250 PF03150 Di-haem cytochrome c peroxidase MQE35_16255 PF03150 Di-haem cytochrome c peroxidase MQE35_16260 PF07690 Major Facilitator Superfamily MQE35_16270 PF07971 Glycosyl hydrolase family 92 MQE35_16270 PF17678 Glycosyl hydrolase family 92 N-terminal domain MQE35_16280 PF00480 ROK family MQE35_16290 PF17678 Glycosyl hydrolase family 92 N-terminal domain MQE35_16290 PF07971 Glycosyl hydrolase family 92 MQE35_16295 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain MQE35_16295 PF04616 Glycosyl hydrolases family 43 MQE35_16300 PF00356 Bacterial regulatory proteins, lacI family MQE35_16305 PF03971 Monomeric isocitrate dehydrogenase MQE35_16310 PF01245 Ribosomal protein L19 MQE35_16315 PF01746 tRNA (Guanine-1)-methyltransferase MQE35_16325 PF00595 PDZ domain MQE35_16330 PF01678 Diaminopimelate epimerase MQE35_16335 PF00583 Acetyltransferase (GNAT) family MQE35_16340 PF02618 YceG-like family MQE35_16350 PF00180 Isocitrate/isopropylmalate dehydrogenase MQE35_16355 PF00682 HMGL-like MQE35_16355 PF08502 LeuA allosteric (dimerisation) domain MQE35_16370 PF00849 RNA pseudouridylate synthase MQE35_16370 PF01479 S4 domain MQE35_16375 PF02548 Ketopantoate hydroxymethyltransferase MQE35_16385 PF00012 Hsp70 protein MQE35_16400 PF03061 Thioesterase superfamily MQE35_16405 PF00425 chorismate binding enzyme MQE35_16410 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MQE35_16410 PF16582 Middle domain of thiamine pyrophosphate MQE35_16410 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MQE35_16425 PF17783 CvfB-like winged helix domain MQE35_16425 PF13509 S1 domain MQE35_16440 PF00378 Enoyl-CoA hydratase/isomerase MQE35_16445 PF01040 UbiA prenyltransferase family MQE35_16455 PF13378 Enolase C-terminal domain-like MQE35_16455 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain MQE35_16475 PF01039 Carboxyl transferase domain MQE35_16485 PF00005 ABC transporter MQE35_16485 PF12848 ABC transporter MQE35_16490 PF00271 Helicase conserved C-terminal domain MQE35_16490 PF00270 DEAD/DEAH box helicase MQE35_16490 PF17191 RecG wedge domain MQE35_16500 PF11838 ERAP1-like C-terminal domain MQE35_16500 PF01433 Peptidase family M1 domain MQE35_16525 PF01645 Conserved region in glutamate synthase MQE35_16530 PF07687 Peptidase dimerisation domain MQE35_16530 PF01546 Peptidase family M20/M25/M40 MQE35_16540 PF13361 UvrD-like helicase C-terminal domain MQE35_16540 PF00580 UvrD/REP helicase N-terminal domain MQE35_16545 PF01300 Telomere recombination MQE35_16550 PF00543 Nitrogen regulatory protein P-II MQE35_16575 PF00664 ABC transporter transmembrane region MQE35_16575 PF00005 ABC transporter MQE35_16580 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain MQE35_16580 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III MQE35_16580 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II MQE35_16580 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I MQE35_16585 PF00535 Glycosyl transferase family 2 MQE35_16595 PF01197 Ribosomal protein L31 MQE35_16600 PF02224 Cytidylate kinase MQE35_16605 PF00575 S1 RNA binding domain MQE35_16610 PF12706 Beta-lactamase superfamily domain MQE35_16625 PF10415 Fumarase C C-terminus MQE35_16625 PF00206 Lyase MQE35_16640 PF03960 ArsC family MQE35_16650 PF01212 Beta-eliminating lyase MQE35_16655 PF07411 Domain of unknown function (DUF1508) MQE35_16660 PF00691 OmpA family MQE35_16660 PF01389 OmpA-like transmembrane domain MQE35_16665 PF02575 YbaB/EbfC DNA-binding family MQE35_16670 PF00326 Prolyl oligopeptidase family MQE35_16670 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain MQE35_16675 PF00571 CBS domain MQE35_16675 PF00291 Pyridoxal-phosphate dependent enzyme MQE35_16680 PF00155 Aminotransferase class I and II MQE35_16690 PF01979 Amidohydrolase family MQE35_16705 PF03741 Integral membrane protein TerC family MQE35_16725 PF00578 AhpC/TSA family MQE35_16730 PF10576 Iron-sulfur binding domain of endonuclease III MQE35_16730 PF00633 Helix-hairpin-helix motif MQE35_16730 PF00730 HhH-GPD superfamily base excision DNA repair protein MQE35_16745 PF17755 UvrA DNA-binding domain MQE35_16745 PF17760 UvrA interaction domain MQE35_16810 PF03150 Di-haem cytochrome c peroxidase MQE35_16820 PF00005 ABC transporter MQE35_16825 PF01625 Peptide methionine sulfoxide reductase MQE35_16830 PF01227 GTP cyclohydrolase I MQE35_16840 PF00404 Dockerin type I domain MQE35_16860 PF01842 ACT domain MQE35_16860 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MQE35_16860 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MQE35_16865 PF00266 Aminotransferase class-V MQE35_16875 PF00037 4Fe-4S binding domain MQE35_16880 PF00593 TonB dependent receptor MQE35_16880 PF07715 TonB-dependent Receptor Plug Domain MQE35_16885 PF06071 Protein of unknown function (DUF933) MQE35_16885 PF01926 50S ribosome-binding GTPase MQE35_16900 PF01751 Toprim domain MQE35_16900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MQE35_16900 PF00986 DNA gyrase B subunit, carboxyl terminus MQE35_16900 PF00204 DNA gyrase B MQE35_16905 PF00521 DNA gyrase/topoisomerase IV, subunit A MQE35_16910 PF08029 HisG, C-terminal domain MQE35_16910 PF01634 ATP phosphoribosyltransferase MQE35_16915 PF00583 Acetyltransferase (GNAT) family MQE35_16920 PF00815 Histidinol dehydrogenase MQE35_16925 PF00583 Acetyltransferase (GNAT) family MQE35_16930 PF00155 Aminotransferase class I and II MQE35_16935 PF00475 Imidazoleglycerol-phosphate dehydratase MQE35_16940 PF00117 Glutamine amidotransferase class-I MQE35_16945 PF00977 Histidine biosynthesis protein MQE35_16950 PF00977 Histidine biosynthesis protein MQE35_16955 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase MQE35_16955 PF01502 Phosphoribosyl-AMP cyclohydrolase MQE35_16960 PF00872 Transposase, Mutator family MQE35_16965 PF02634 FdhD/NarQ family MQE35_16970 PF00384 Molybdopterin oxidoreductase MQE35_16970 PF01568 Molydopterin dinucleotide binding domain MQE35_16975 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) MQE35_16975 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 MQE35_16985 PF00478 IMP dehydrogenase / GMP reductase domain MQE35_16990 PF02780 Transketolase, C-terminal domain MQE35_16990 PF02779 Transketolase, pyrimidine binding domain MQE35_17005 PF03641 Possible lysine decarboxylase MQE35_17010 PF00005 ABC transporter MQE35_17010 PF17760 UvrA interaction domain MQE35_17010 PF17755 UvrA DNA-binding domain MQE35_17040 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I MQE35_17040 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II MQE35_17040 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III MQE35_17040 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain MQE35_17045 PF03279 Bacterial lipid A biosynthesis acyltransferase MQE35_17060 PF00578 AhpC/TSA family MQE35_17070 PF02913 FAD linked oxidases, C-terminal domain MQE35_17070 PF13183 4Fe-4S dicluster domain MQE35_17070 PF01565 FAD binding domain MQE35_17080 PF01264 Chorismate synthase MQE35_17085 PF00375 Sodium:dicarboxylate symporter family MQE35_17090 PF12146 Serine aminopeptidase, S33 MQE35_17095 PF07715 TonB-dependent Receptor Plug Domain MQE35_17095 PF00593 TonB dependent receptor MQE35_17100 PF04134 Protein of unknown function, DUF393 MQE35_17110 PF12724 Flavodoxin domain MQE35_17120 PF00106 short chain dehydrogenase MQE35_17130 PF00106 short chain dehydrogenase MQE35_17140 PF01713 Smr domain MQE35_17140 PF00488 MutS domain V MQE35_17145 PF03167 Uracil DNA glycosylase superfamily MQE35_17160 PF13090 Polyphosphate kinase C-terminal domain 2 MQE35_17160 PF17941 Polyphosphate kinase C-terminal domain 1 MQE35_17160 PF13089 Polyphosphate kinase N-terminal domain MQE35_17160 PF02503 Polyphosphate kinase middle domain MQE35_17165 PF01048 Phosphorylase superfamily MQE35_17190 PF00691 OmpA family MQE35_17205 PF00403 Heavy-metal-associated domain MQE35_17210 PF00199 Catalase MQE35_17210 PF18011 C-terminal domain found in long catalases MQE35_17210 PF06628 Catalase-related immune-responsive MQE35_17215 PF01270 Glycosyl hydrolases family 8 MQE35_17225 PF01037 Lrp/AsnC ligand binding domain MQE35_17245 PF07715 TonB-dependent Receptor Plug Domain MQE35_17245 PF00593 TonB dependent receptor MQE35_17280 PF03150 Di-haem cytochrome c peroxidase MQE35_17280 PF00034 Cytochrome c MQE35_17295 PF10011 Predicted membrane protein (DUF2254) MQE35_17315 PF16363 GDP-mannose 4,6 dehydratase MQE35_17320 PF12833 Helix-turn-helix domain MQE35_17320 PF14525 AraC-binding-like domain MQE35_17335 PF01758 Sodium Bile acid symporter family MQE35_17380 PF01139 tRNA-splicing ligase RtcB MQE35_17385 PF00472 RF-1 domain MQE35_17405 PF00005 ABC transporter MQE35_17405 PF03412 Peptidase C39 family MQE35_17405 PF00664 ABC transporter transmembrane region MQE35_17480 PF08402 TOBE domain MQE35_17480 PF00005 ABC transporter MQE35_17495 PF02463 RecF/RecN/SMC N terminal domain MQE35_17500 PF13361 UvrD-like helicase C-terminal domain MQE35_17500 PF00580 UvrD/REP helicase N-terminal domain MQE35_17505 PF03600 Citrate transporter MQE35_17505 PF02080 TrkA-C domain MQE35_17525 PF00085 Thioredoxin MQE35_17545 PF00582 Universal stress protein family MQE35_17565 PF00675 Insulinase (Peptidase family M16) MQE35_17565 PF05193 Peptidase M16 inactive domain MQE35_17570 PF02629 CoA binding domain MQE35_17570 PF00549 CoA-ligase MQE35_17575 PF00132 Bacterial transferase hexapeptide (six repeats) MQE35_17575 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD MQE35_17580 PF09285 Elongation factor P, C-terminal MQE35_17580 PF01132 Elongation factor P (EF-P) OB domain MQE35_17580 PF08207 Elongation factor P (EF-P) KOW-like domain MQE35_17585 PF00132 Bacterial transferase hexapeptide (six repeats) MQE35_17585 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 MQE35_17590 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase MQE35_17590 PF07977 FabA-like domain MQE35_17595 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD MQE35_17595 PF00132 Bacterial transferase hexapeptide (six repeats) MQE35_17600 PF01966 HD domain MQE35_17605 PF00072 Response regulator receiver domain MQE35_17605 PF02954 Bacterial regulatory protein, Fis family MQE35_17605 PF00158 Sigma-54 interaction domain MQE35_17610 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE MQE35_17615 PF01262 Alanine dehydrogenase/PNT, C-terminal domain MQE35_17615 PF05222 Alanine dehydrogenase/PNT, N-terminal domain MQE35_17625 PF01761 3-dehydroquinate synthase MQE35_17640 PF00491 Arginase family MQE35_17645 PF01916 Deoxyhypusine synthase MQE35_17660 PF04060 Putative Fe-S cluster MQE35_17660 PF13187 4Fe-4S dicluster domain MQE35_17660 PF00037 4Fe-4S binding domain MQE35_17665 PF10531 SLBB domain MQE35_17665 PF13375 RnfC Barrel sandwich hybrid domain MQE35_17665 PF13237 4Fe-4S dicluster domain MQE35_17665 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit MQE35_17670 PF03116 NQR2, RnfD, RnfE family MQE35_17675 PF04205 FMN-binding domain MQE35_17680 PF02508 Rnf-Nqr subunit, membrane protein MQE35_17685 PF02508 Rnf-Nqr subunit, membrane protein MQE35_17710 PF01638 HxlR-like helix-turn-helix MQE35_17715 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MQE35_17720 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg MQE35_17720 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase MQE35_17720 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II MQE35_17725 PF00037 4Fe-4S binding domain MQE35_17730 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MQE35_17730 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg MQE35_17730 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase MQE35_17730 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II MQE35_17730 PF10371 Domain of unknown function MQE35_17740 PF05163 DinB family MQE35_17765 PF00311 Phosphoenolpyruvate carboxylase MQE35_17770 PF01037 Lrp/AsnC ligand binding domain MQE35_17770 PF13404 AsnC-type helix-turn-helix domain MQE35_17790 PF03741 Integral membrane protein TerC family MQE35_17795 PF13472 GDSL-like Lipase/Acylhydrolase family MQE35_17795 PF07859 alpha/beta hydrolase fold MQE35_17800 PF16355 Domain of unknown function (DUF4982) MQE35_17800 PF02837 Glycosyl hydrolases family 2, sugar binding domain MQE35_17800 PF02836 Glycosyl hydrolases family 2, TIM barrel domain MQE35_17800 PF00703 Glycosyl hydrolases family 2 MQE35_17800 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 MQE35_17835 PF00732 GMC oxidoreductase MQE35_17835 PF05199 GMC oxidoreductase MQE35_17880 PF00873 AcrB/AcrD/AcrF family MQE35_17885 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MQE35_17895 PF10518 TAT (twin-arginine translocation) pathway signal sequence MQE35_17895 PF00149 Calcineurin-like phosphoesterase MQE35_17900 PF14492 Elongation Factor G, domain II MQE35_17900 PF00679 Elongation factor G C-terminus MQE35_17900 PF00009 Elongation factor Tu GTP binding domain MQE35_17900 PF03764 Elongation factor G, domain IV MQE35_17900 PF03144 Elongation factor Tu domain 2 MQE35_17905 PF01679 Proteolipid membrane potential modulator MQE35_17920 PF12804 MobA-like NTP transferase domain MQE35_17925 PF13478 XdhC Rossmann domain MQE35_17925 PF02625 XdhC and CoxI family MQE35_17930 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase MQE35_17935 PF00111 2Fe-2S iron-sulfur cluster binding domain MQE35_17935 PF01799 [2Fe-2S] binding domain MQE35_17955 PF00912 Transglycosylase MQE35_17955 PF00905 Penicillin binding protein transpeptidase domain MQE35_17970 PF00180 Isocitrate/isopropylmalate dehydrogenase MQE35_17975 PF00682 HMGL-like MQE35_17975 PF08502 LeuA allosteric (dimerisation) domain MQE35_17980 PF00694 Aconitase C-terminal domain MQE35_17985 PF00330 Aconitase family (aconitate hydratase) MQE35_18000 PF00331 Glycosyl hydrolase family 10 MQE35_18010 PF04616 Glycosyl hydrolases family 43 MQE35_18020 PF00171 Aldehyde dehydrogenase family MQE35_18040 PF00132 Bacterial transferase hexapeptide (six repeats) MQE35_18045 PF00291 Pyridoxal-phosphate dependent enzyme MQE35_18050 PF00141 Peroxidase MQE35_18055 PF01544 CorA-like Mg2+ transporter protein MQE35_18060 PF00464 Serine hydroxymethyltransferase MQE35_18085 PF00004 ATPase family associated with various cellular activities (AAA) MQE35_18085 PF07724 AAA domain (Cdc48 subfamily) MQE35_18085 PF17871 AAA lid domain MQE35_18085 PF02861 Clp amino terminal domain, pathogenicity island component MQE35_18085 PF10431 C-terminal, D2-small domain, of ClpB protein MQE35_18095 PF00440 Bacterial regulatory proteins, tetR family MQE35_18095 PF08361 MAATS-type transcriptional repressor, C-terminal region MQE35_18105 PF01791 DeoC/LacD family aldolase MQE35_18110 PF01048 Phosphorylase superfamily MQE35_18125 PF01668 SmpB protein MQE35_18150 PF01408 Oxidoreductase family, NAD-binding Rossmann fold MQE35_18150 PF02894 Oxidoreductase family, C-terminal alpha/beta domain MQE35_18160 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain MQE35_18160 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain MQE35_18170 PF01168 Alanine racemase, N-terminal domain MQE35_18175 PF02151 UvrB/uvrC motif MQE35_18175 PF08459 UvrC Helix-hairpin-helix N-terminal MQE35_18175 PF12826 Helix-hairpin-helix motif MQE35_18175 PF01541 GIY-YIG catalytic domain MQE35_18185 PF00027 Cyclic nucleotide-binding domain MQE35_18185 PF00520 Ion transport protein MQE35_18195 PF02678 Pirin MQE35_18195 PF05726 Pirin C-terminal cupin domain MQE35_18200 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain MQE35_18200 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase MQE35_18205 PF02447 GntP family permease MQE35_18255 PF00072 Response regulator receiver domain MQE35_18255 PF00486 Transcriptional regulatory protein, C terminal MQE35_18260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MQE35_18260 PF00512 His Kinase A (phospho-acceptor) domain MQE35_18265 PF01121 Dephospho-CoA kinase MQE35_18275 PF00535 Glycosyl transferase family 2 MQE35_18275 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 MQE35_18285 PF02463 RecF/RecN/SMC N terminal domain MQE35_18295 PF04127 DNA / pantothenate metabolism flavoprotein MQE35_18295 PF02441 Flavoprotein MQE35_18310 PF00701 Dihydrodipicolinate synthetase family MQE35_18320 PF02872 5'-nucleotidase, C-terminal domain MQE35_18320 PF00149 Calcineurin-like phosphoesterase MQE35_18325 PF02872 5'-nucleotidase, C-terminal domain MQE35_18325 PF00149 Calcineurin-like phosphoesterase MQE35_18335 PF12826 Helix-hairpin-helix motif MQE35_18335 PF03119 NAD-dependent DNA ligase C4 zinc finger domain MQE35_18335 PF00533 BRCA1 C Terminus (BRCT) domain MQE35_18335 PF01653 NAD-dependent DNA ligase adenylation domain MQE35_18335 PF03120 NAD-dependent DNA ligase OB-fold domain MQE35_18345 PF03641 Possible lysine decarboxylase MQE35_18350 PF05175 Methyltransferase small domain MQE35_18350 PF17827 PrmC N-terminal domain MQE35_18355 PF01872 RibD C-terminal domain MQE35_18355 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region MQE35_18360 PF13419 Haloacid dehalogenase-like hydrolase MQE35_18370 PF01205 Uncharacterized protein family UPF0029 MQE35_18370 PF09186 Domain of unknown function (DUF1949) MQE35_18375 PF03061 Thioesterase superfamily