locus-tag class description HRE53_00010 PF13358 DDE superfamily endonuclease HRE53_00070 PF00571 CBS domain HRE53_00070 PF00478 IMP dehydrogenase / GMP reductase domain HRE53_00080 PF01343 Peptidase family S49 HRE53_00085 PF00892 EamA-like transporter family HRE53_00100 PF00563 EAL domain HRE53_00100 PF00990 Diguanylate cyclase, GGDEF domain HRE53_00100 PF03707 Bacterial signalling protein N terminal repeat HRE53_00105 PF13426 PAS domain HRE53_00105 PF13188 PAS domain HRE53_00105 PF00989 PAS fold HRE53_00105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_00105 PF00512 His Kinase A (phospho-acceptor) domain HRE53_00115 PF02562 PhoH-like protein HRE53_00115 PF13638 PIN domain HRE53_00135 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF HRE53_00135 PF17126 RsmF rRNA methyltransferase first C-terminal domain HRE53_00135 PF01189 16S rRNA methyltransferase RsmB/F HRE53_00150 PF00294 pfkB family carbohydrate kinase HRE53_00160 PF00196 Bacterial regulatory proteins, luxR family HRE53_00180 PF02618 YceG-like family HRE53_00190 PF03652 Holliday junction resolvase HRE53_00205 PF00395 S-layer homology domain HRE53_00205 PF04966 Carbohydrate-selective porin, OprB family HRE53_00220 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE HRE53_00280 PF14492 Elongation Factor G, domain II HRE53_00280 PF00009 Elongation factor Tu GTP binding domain HRE53_00280 PF03144 Elongation factor Tu domain 2 HRE53_00280 PF00679 Elongation factor G C-terminus HRE53_00285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_00285 PF00512 His Kinase A (phospho-acceptor) domain HRE53_00285 PF09308 LuxQ, periplasmic HRE53_00285 PF00072 Response regulator receiver domain HRE53_00290 PF01590 GAF domain HRE53_00290 PF00563 EAL domain HRE53_00290 PF00990 Diguanylate cyclase, GGDEF domain HRE53_00290 PF00360 Phytochrome region HRE53_00295 PF01894 Uncharacterised protein family UPF0047 HRE53_00305 PF12795 Mechanosensitive ion channel porin domain HRE53_00305 PF12794 Mechanosensitive ion channel inner membrane domain 1 HRE53_00305 PF00924 Mechanosensitive ion channel HRE53_00320 PF01544 CorA-like Mg2+ transporter protein HRE53_00335 PF01694 Rhomboid family HRE53_00340 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HRE53_00340 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HRE53_00340 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HRE53_00340 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HRE53_00345 PF02355 Protein export membrane protein HRE53_00345 PF07549 SecD/SecF GG Motif HRE53_00365 PF00194 Eukaryotic-type carbonic anhydrase HRE53_00385 PF10742 Protein of unknown function (DUF2555) HRE53_00390 PF02441 Flavoprotein HRE53_00390 PF04127 DNA / pantothenate metabolism flavoprotein HRE53_00405 PF01967 MoaC family HRE53_00430 PF02627 Carboxymuconolactone decarboxylase family HRE53_00440 PF04542 Sigma-70 region 2 HRE53_00440 PF08281 Sigma-70, region 4 HRE53_00440 PF12680 SnoaL-like domain HRE53_00460 PF00270 DEAD/DEAH box helicase HRE53_00460 PF12343 Cold shock protein DEAD box A HRE53_00460 PF00271 Helicase conserved C-terminal domain HRE53_00460 PF03880 DbpA RNA binding domain HRE53_00465 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 HRE53_00470 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit HRE53_00475 PF01658 Myo-inositol-1-phosphate synthase HRE53_00490 PF02685 Glucokinase HRE53_00495 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HRE53_00495 PF07992 Pyridine nucleotide-disulphide oxidoreductase HRE53_00495 PF00403 Heavy-metal-associated domain HRE53_00505 PF07555 beta-N-acetylglucosaminidase HRE53_00505 PF00963 Cohesin domain HRE53_00505 PF00754 F5/8 type C domain HRE53_00505 PF00041 Fibronectin type III domain HRE53_00505 PF02838 Glycosyl hydrolase family 20, domain 2 HRE53_00515 PF03976 Polyphosphate kinase 2 (PPK2) HRE53_00520 PF12437 Glutamine synthetase type III N terminal HRE53_00520 PF18318 Glutamine synthetase C-terminal domain HRE53_00520 PF00120 Glutamine synthetase, catalytic domain HRE53_00525 PF03239 Iron permease FTR1 family HRE53_00530 PF01551 Peptidase family M23 HRE53_00530 PF08460 Bacterial SH3 domain HRE53_00575 PF00155 Aminotransferase class I and II HRE53_00580 PF01434 Peptidase family M41 HRE53_00580 PF17862 AAA+ lid domain HRE53_00580 PF00004 ATPase family associated with various cellular activities (AAA) HRE53_00595 PF04551 GcpE protein HRE53_00605 PF01636 Phosphotransferase enzyme family HRE53_00620 PF13847 Methyltransferase domain HRE53_00645 PF01661 Macro domain HRE53_00665 PF01588 Putative tRNA binding domain HRE53_00665 PF03147 Ferredoxin-fold anticodon binding domain HRE53_00665 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain HRE53_00665 PF03483 B3/4 domain HRE53_00665 PF03484 tRNA synthetase B5 domain HRE53_00755 PF00512 His Kinase A (phospho-acceptor) domain HRE53_00755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_00755 PF00360 Phytochrome region HRE53_00755 PF01590 GAF domain HRE53_00755 PF08446 PAS fold HRE53_00760 PF00072 Response regulator receiver domain HRE53_00765 PF00072 Response regulator receiver domain HRE53_00765 PF02954 Bacterial regulatory protein, Fis family HRE53_00765 PF00158 Sigma-54 interaction domain HRE53_00770 PF00270 DEAD/DEAH box helicase HRE53_00770 PF00271 Helicase conserved C-terminal domain HRE53_00770 PF17764 3′ DNA-binding domain (3′BD) HRE53_00770 PF18074 Primosomal protein N C-terminal domain HRE53_00770 PF18319 PriA DNA helicase Cys-rich region (CRR) domain HRE53_00775 PF03808 Glycosyl transferase WecB/TagA/CpsF family HRE53_00815 PF12849 PBP superfamily domain HRE53_00835 PF07885 Ion channel HRE53_00835 PF17655 Inward rectifier potassium channel C-terminal domain HRE53_00840 PF04115 Ureidoglycolate lyase HRE53_00860 PF02625 XdhC and CoxI family HRE53_00860 PF13478 XdhC Rossmann domain HRE53_00875 PF00809 Pterin binding enzyme HRE53_00905 PF00226 DnaJ domain HRE53_00905 PF01556 DnaJ C terminal domain HRE53_00905 PF00684 DnaJ central domain HRE53_00925 PF12849 PBP superfamily domain HRE53_00930 PF00528 Binding-protein-dependent transport system inner membrane component HRE53_00935 PF00528 Binding-protein-dependent transport system inner membrane component HRE53_00940 PF00005 ABC transporter HRE53_00950 PF00400 WD domain, G-beta repeat HRE53_00950 PF00931 NB-ARC domain HRE53_00960 PF00872 Transposase, Mutator family HRE53_00980 PF01507 Phosphoadenosine phosphosulfate reductase family HRE53_00995 PF12849 PBP superfamily domain HRE53_01000 PF01699 Sodium/calcium exchanger protein HRE53_01005 PF05721 Phytanoyl-CoA dioxygenase (PhyH) HRE53_01030 PF01609 Transposase DDE domain HRE53_01030 PF13808 DDE_Tnp_1-associated HRE53_01035 PF01609 Transposase DDE domain HRE53_01035 PF13808 DDE_Tnp_1-associated HRE53_01040 PF00535 Glycosyl transferase family 2 HRE53_01045 PF00534 Glycosyl transferases group 1 HRE53_01080 PF00664 ABC transporter transmembrane region HRE53_01080 PF00005 ABC transporter HRE53_01115 PF13614 AAA domain HRE53_01125 PF01370 NAD dependent epimerase/dehydratase family HRE53_01130 PF00072 Response regulator receiver domain HRE53_01130 PF00486 Transcriptional regulatory protein, C terminal HRE53_01160 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase HRE53_01165 PF00483 Nucleotidyl transferase HRE53_01170 PF16363 GDP-mannose 4,6 dehydratase HRE53_01180 PF13614 AAA domain HRE53_01185 PF01555 DNA methylase HRE53_01190 PF00156 Phosphoribosyl transferase domain HRE53_01195 PF01223 DNA/RNA non-specific endonuclease HRE53_01200 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HRE53_01200 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HRE53_01205 PF02457 DisA bacterial checkpoint controller nucleotide-binding HRE53_01220 PF01556 DnaJ C terminal domain HRE53_01220 PF00226 DnaJ domain HRE53_01220 PF00684 DnaJ central domain HRE53_01225 PF00482 Type II secretion system (T2SS), protein F HRE53_01230 PF00437 Type II/IV secretion system protein HRE53_01235 PF00437 Type II/IV secretion system protein HRE53_01235 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain HRE53_01240 PF01025 GrpE HRE53_01245 PF00012 Hsp70 protein HRE53_01250 PF00226 DnaJ domain HRE53_01250 PF00684 DnaJ central domain HRE53_01250 PF01556 DnaJ C terminal domain HRE53_01260 PF03193 RsgA GTPase HRE53_01280 PF03330 Lytic transglycolase HRE53_01285 PF00586 AIR synthase related protein, N-terminal domain HRE53_01285 PF02769 AIR synthase related protein, C-terminal domain HRE53_01315 PF08502 LeuA allosteric (dimerisation) domain HRE53_01315 PF00682 HMGL-like HRE53_01330 PF00211 Adenylate and Guanylate cyclase catalytic domain HRE53_01335 PF16416 ARM-like repeat domain, GUN4-N terminal HRE53_01335 PF05419 GUN4-like HRE53_01365 PF02779 Transketolase, pyrimidine binding domain HRE53_01365 PF00364 Biotin-requiring enzyme HRE53_01365 PF02780 Transketolase, C-terminal domain HRE53_01370 PF07549 SecD/SecF GG Motif HRE53_01370 PF02355 Protein export membrane protein HRE53_01375 PF02355 Protein export membrane protein HRE53_01375 PF07549 SecD/SecF GG Motif HRE53_01410 PF01850 PIN domain HRE53_01450 PF03649 Uncharacterised protein family (UPF0014) HRE53_01465 PF01556 DnaJ C terminal domain HRE53_01465 PF00226 DnaJ domain HRE53_01465 PF00684 DnaJ central domain HRE53_01470 PF00528 Binding-protein-dependent transport system inner membrane component HRE53_01480 PF12419 SNF2 Helicase protein HRE53_01480 PF00271 Helicase conserved C-terminal domain HRE53_01480 PF00176 SNF2 family N-terminal domain HRE53_01485 PF03781 Sulfatase-modifying factor enzyme 1 HRE53_01510 PF01593 Flavin containing amine oxidoreductase HRE53_01510 PF02027 RolB/RolC glucosidase family HRE53_01515 PF00005 ABC transporter HRE53_01515 PF00571 CBS domain HRE53_01520 PF00936 BMC domain HRE53_01525 PF00936 BMC domain HRE53_01535 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HRE53_01535 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HRE53_01540 PF02504 Fatty acid synthesis protein HRE53_01550 PF04286 Protein of unknown function (DUF445) HRE53_01555 PF00005 ABC transporter HRE53_01565 PF03109 ABC1 family HRE53_01575 PF02617 ATP-dependent Clp protease adaptor protein ClpS HRE53_01590 PF01029 NusB family HRE53_01590 PF01189 16S rRNA methyltransferase RsmB/F HRE53_01595 PF00005 ABC transporter HRE53_01615 PF05973 Phage derived protein Gp49-like (DUF891) HRE53_01630 PF01368 DHH family HRE53_01630 PF10141 Single-strand DNA-specific exonuclease, C terminal domain HRE53_01630 PF17768 RecJ OB domain HRE53_01630 PF02272 DHHA1 domain HRE53_01655 PF03808 Glycosyl transferase WecB/TagA/CpsF family HRE53_01660 PF00535 Glycosyl transferase family 2 HRE53_01705 PF11965 Domain of unknown function (DUF3479) HRE53_01705 PF02514 CobN/Magnesium Chelatase HRE53_01715 PF00501 AMP-binding enzyme HRE53_01735 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) HRE53_01740 PF01165 Ribosomal protein S21 HRE53_01745 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain HRE53_01745 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain HRE53_01760 PF03572 Peptidase family S41 HRE53_01760 PF00595 PDZ domain HRE53_01765 PF03912 Psb28 protein HRE53_01770 PF01113 Dihydrodipicolinate reductase, N-terminus HRE53_01770 PF05173 Dihydrodipicolinate reductase, C-terminus HRE53_01780 PF00534 Glycosyl transferases group 1 HRE53_01780 PF13439 Glycosyltransferase Family 4 HRE53_01785 PF00534 Glycosyl transferases group 1 HRE53_01785 PF13439 Glycosyltransferase Family 4 HRE53_01790 PF00534 Glycosyl transferases group 1 HRE53_01790 PF13439 Glycosyltransferase Family 4 HRE53_01795 PF00534 Glycosyl transferases group 1 HRE53_01795 PF13439 Glycosyltransferase Family 4 HRE53_01810 PF12706 Beta-lactamase superfamily domain HRE53_01830 PF00072 Response regulator receiver domain HRE53_01830 PF01627 Hpt domain HRE53_01830 PF00486 Transcriptional regulatory protein, C terminal HRE53_01835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_01835 PF00989 PAS fold HRE53_01835 PF16736 Single Cache-like HRE53_01835 PF00512 His Kinase A (phospho-acceptor) domain HRE53_01870 PF17757 UvrB interaction domain HRE53_01870 PF00271 Helicase conserved C-terminal domain HRE53_01870 PF04851 Type III restriction enzyme, res subunit HRE53_01870 PF02151 UvrB/uvrC motif HRE53_01870 PF12344 Ultra-violet resistance protein B HRE53_01875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_01875 PF00512 His Kinase A (phospho-acceptor) domain HRE53_01885 PF02754 Cysteine-rich domain HRE53_01890 PF00561 alpha/beta hydrolase fold HRE53_01895 PF00550 Phosphopantetheine attachment site HRE53_01900 PF02801 Beta-ketoacyl synthase, C-terminal domain HRE53_01900 PF00109 Beta-ketoacyl synthase, N-terminal domain HRE53_01905 PF02780 Transketolase, C-terminal domain HRE53_01905 PF02779 Transketolase, pyrimidine binding domain HRE53_01905 PF00456 Transketolase, thiamine diphosphate binding domain HRE53_01915 PF12681 Glyoxalase-like domain HRE53_01940 PF04055 Radical SAM superfamily HRE53_01940 PF06463 Molybdenum Cofactor Synthesis C HRE53_01945 PF00111 2Fe-2S iron-sulfur cluster binding domain HRE53_01950 PF01195 Peptidyl-tRNA hydrolase HRE53_01955 PF02416 mttA/Hcf106 family HRE53_01960 PF00737 Photosystem II 10 kDa phosphoprotein HRE53_01965 PF02468 Photosystem II reaction centre N protein (psbN) HRE53_01975 PF02696 Uncharacterized ACR, YdiU/UPF0061 family HRE53_01985 PF01765 Ribosome recycling factor HRE53_01990 PF00696 Amino acid kinase family HRE53_02005 PF01794 Ferric reductase like transmembrane component HRE53_02050 PF00924 Mechanosensitive ion channel HRE53_02055 PF17932 Tetracyclin repressor-like, C-terminal domain HRE53_02055 PF00440 Bacterial regulatory proteins, tetR family HRE53_02075 PF00005 ABC transporter HRE53_02075 PF02687 FtsX-like permease family HRE53_02075 PF12704 MacB-like periplasmic core domain HRE53_02080 PF01494 FAD binding domain HRE53_02090 PF13180 PDZ domain HRE53_02100 PF01255 Putative undecaprenyl diphosphate synthase HRE53_02115 PF00999 Sodium/hydrogen exchanger family HRE53_02120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_02120 PF07689 KaiB domain HRE53_02120 PF00512 His Kinase A (phospho-acceptor) domain HRE53_02140 PF00403 Heavy-metal-associated domain HRE53_02165 PF00690 Cation transporter/ATPase, N-terminus HRE53_02165 PF00689 Cation transporting ATPase, C-terminus HRE53_02170 PF02887 Pyruvate kinase, alpha/beta domain HRE53_02170 PF00224 Pyruvate kinase, barrel domain HRE53_02175 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HRE53_02175 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HRE53_02180 PF02798 Glutathione S-transferase, N-terminal domain HRE53_02180 PF14497 Glutathione S-transferase, C-terminal domain HRE53_02205 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HRE53_02210 PF14437 MafB19-like deaminase HRE53_02215 PF02637 GatB domain HRE53_02215 PF02934 GatB/GatE catalytic domain HRE53_02235 PF00535 Glycosyl transferase family 2 HRE53_02255 PF13184 NusA-like KH domain HRE53_02255 PF08529 NusA N-terminal domain HRE53_02255 PF00575 S1 RNA binding domain HRE53_02260 PF02576 RimP N-terminal domain HRE53_02275 PF01668 SmpB protein HRE53_02280 PF03055 Retinal pigment epithelial membrane protein HRE53_02320 PF00291 Pyridoxal-phosphate dependent enzyme HRE53_02325 PF02597 ThiS family HRE53_02335 PF00909 Ammonium Transporter Family HRE53_02350 PF01584 CheW-like domain HRE53_02350 PF02895 Signal transducing histidine kinase, homodimeric domain HRE53_02350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_02350 PF01627 Hpt domain HRE53_02350 PF00072 Response regulator receiver domain HRE53_02355 PF01590 GAF domain HRE53_02355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HRE53_02365 PF00072 Response regulator receiver domain HRE53_02370 PF00072 Response regulator receiver domain HRE53_02370 PF14332 Domain of unknown function (DUF4388) HRE53_02380 PF00694 Aconitase C-terminal domain HRE53_02395 PF05685 Putative restriction endonuclease HRE53_02400 PF00180 Isocitrate/isopropylmalate dehydrogenase HRE53_02410 PF00231 ATP synthase HRE53_02415 PF00306 ATP synthase alpha/beta chain, C terminal domain HRE53_02415 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HRE53_02415 PF02874 ATP synthase alpha/beta family, beta-barrel domain HRE53_02420 PF00213 ATP synthase delta (OSCP) subunit HRE53_02425 PF00430 ATP synthase B/B' CF(0) HRE53_02430 PF00430 ATP synthase B/B' CF(0) HRE53_02435 PF00137 ATP synthase subunit C HRE53_02440 PF00119 ATP synthase A chain HRE53_02445 PF12966 N-ATPase, AtpR subunit HRE53_02465 PF01209 ubiE/COQ5 methyltransferase family HRE53_02480 PF08241 Methyltransferase domain HRE53_02490 PF01507 Phosphoadenosine phosphosulfate reductase family HRE53_02495 PF02814 UreE urease accessory protein, N-terminal domain HRE53_02495 PF05194 UreE urease accessory protein, C-terminal domain HRE53_02510 PF01730 UreF HRE53_02515 PF02492 CobW/HypB/UreG, nucleotide-binding domain HRE53_02520 PF04966 Carbohydrate-selective porin, OprB family HRE53_02520 PF00395 S-layer homology domain HRE53_02530 PF02653 Branched-chain amino acid transport system / permease component HRE53_02540 PF12399 Branched-chain amino acid ATP-binding cassette transporter HRE53_02540 PF00005 ABC transporter HRE53_02545 PF00005 ABC transporter HRE53_02550 PF02798 Glutathione S-transferase, N-terminal domain HRE53_02555 PF00842 Alanine racemase, C-terminal domain HRE53_02555 PF01168 Alanine racemase, N-terminal domain HRE53_02560 PF00731 AIR carboxylase HRE53_02570 PF01979 Amidohydrolase family HRE53_02585 PF01126 Heme oxygenase HRE53_02590 PF01741 Large-conductance mechanosensitive channel, MscL HRE53_02595 PF01795 MraW methylase family HRE53_02605 PF00905 Penicillin binding protein transpeptidase domain HRE53_02605 PF03793 PASTA domain HRE53_02605 PF03717 Penicillin-binding Protein dimerisation domain HRE53_02610 PF04134 Protein of unknown function, DUF393 HRE53_02620 PF05193 Peptidase M16 inactive domain HRE53_02620 PF00675 Insulinase (Peptidase family M16) HRE53_02635 PF00348 Polyprenyl synthetase HRE53_02640 PF01593 Flavin containing amine oxidoreductase HRE53_02660 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP HRE53_02665 PF00672 HAMP domain HRE53_02665 PF13426 PAS domain HRE53_02665 PF00512 His Kinase A (phospho-acceptor) domain HRE53_02665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_02670 PF00486 Transcriptional regulatory protein, C terminal HRE53_02670 PF00072 Response regulator receiver domain HRE53_02680 PF00684 DnaJ central domain HRE53_02680 PF01556 DnaJ C terminal domain HRE53_02680 PF00226 DnaJ domain HRE53_02685 PF00067 Cytochrome P450 HRE53_02695 PF00462 Glutaredoxin HRE53_02705 PF00440 Bacterial regulatory proteins, tetR family HRE53_02710 PF13545 Crp-like helix-turn-helix domain HRE53_02715 PF00005 ABC transporter HRE53_02725 PF14572 Phosphoribosyl synthetase-associated domain HRE53_02725 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HRE53_02730 PF12327 FtsZ family, C-terminal domain HRE53_02730 PF00091 Tubulin/FtsZ family, GTPase domain HRE53_02740 PF00174 Oxidoreductase molybdopterin binding domain HRE53_02745 PF04321 RmlD substrate binding domain HRE53_02750 PF13439 Glycosyltransferase Family 4 HRE53_02750 PF00534 Glycosyl transferases group 1 HRE53_02765 PF03358 NADPH-dependent FMN reductase HRE53_02780 PF00486 Transcriptional regulatory protein, C terminal HRE53_02780 PF00072 Response regulator receiver domain HRE53_02790 PF02219 Methylenetetrahydrofolate reductase HRE53_02790 PF02574 Homocysteine S-methyltransferase HRE53_02795 PF03699 Uncharacterised protein family (UPF0182) HRE53_02825 PF04493 Endonuclease V HRE53_02830 PF01513 ATP-NAD kinase HRE53_02880 PF01555 DNA methylase HRE53_02885 PF00106 short chain dehydrogenase HRE53_02895 PF00155 Aminotransferase class I and II HRE53_02900 PF16197 Ketoacyl-synthetase C-terminal extension HRE53_02900 PF00501 AMP-binding enzyme HRE53_02900 PF13193 AMP-binding enzyme C-terminal domain HRE53_02900 PF00668 Condensation domain HRE53_02900 PF14765 Polyketide synthase dehydratase HRE53_02900 PF00550 Phosphopantetheine attachment site HRE53_02900 PF00109 Beta-ketoacyl synthase, N-terminal domain HRE53_02900 PF08659 KR domain HRE53_02900 PF02801 Beta-ketoacyl synthase, C-terminal domain HRE53_02905 PF00501 AMP-binding enzyme HRE53_02925 PF00501 AMP-binding enzyme HRE53_02950 PF03473 MOSC domain HRE53_02950 PF03475 3-alpha domain HRE53_02985 PF02222 ATP-grasp domain HRE53_02990 PF00696 Amino acid kinase family HRE53_02990 PF13840 ACT domain HRE53_02995 PF00528 Binding-protein-dependent transport system inner membrane component HRE53_03015 PF04241 Protein of unknown function (DUF423) HRE53_03025 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) HRE53_03035 PF01627 Hpt domain HRE53_03035 PF00072 Response regulator receiver domain HRE53_03035 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HRE53_03035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_03035 PF00672 HAMP domain HRE53_03035 PF00512 His Kinase A (phospho-acceptor) domain HRE53_03045 PF01609 Transposase DDE domain HRE53_03045 PF13808 DDE_Tnp_1-associated HRE53_03050 PF08865 Domain of unknown function (DUF1830) HRE53_03060 PF05996 Ferredoxin-dependent bilin reductase HRE53_03070 PF08239 Bacterial SH3 domain HRE53_03070 PF01520 N-acetylmuramoyl-L-alanine amidase HRE53_03085 PF00849 RNA pseudouridylate synthase HRE53_03135 PF04072 Leucine carboxyl methyltransferase HRE53_03150 PF01980 tRNA-methyltransferase O HRE53_03150 PF18389 TrmO C-terminal domain HRE53_03155 PF00588 SpoU rRNA Methylase family HRE53_03190 PF03222 Tryptophan/tyrosine permease family HRE53_03195 PF01809 Putative membrane protein insertion efficiency factor HRE53_03205 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HRE53_03205 PF14579 Helix-hairpin-helix motif HRE53_03205 PF02811 PHP domain HRE53_03205 PF01336 OB-fold nucleic acid binding domain HRE53_03205 PF07733 Bacterial DNA polymerase III alpha NTPase domain HRE53_03230 PF01960 ArgJ family HRE53_03235 PF08241 Methyltransferase domain HRE53_03245 PF01112 Asparaginase HRE53_03250 PF01385 Probable transposase HRE53_03250 PF07282 Putative transposase DNA-binding domain HRE53_03250 PF12323 Helix-turn-helix domain HRE53_03265 PF01914 MarC family integral membrane protein HRE53_03285 PF00421 Photosystem II protein HRE53_03290 PF00124 Photosynthetic reaction centre protein HRE53_03295 PF02392 Ycf4 HRE53_03300 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HRE53_03305 PF00583 Acetyltransferase (GNAT) family HRE53_03310 PF00109 Beta-ketoacyl synthase, N-terminal domain HRE53_03310 PF02801 Beta-ketoacyl synthase, C-terminal domain HRE53_03325 PF00581 Rhodanese-like domain HRE53_03325 PF17773 UPF0176 acylphosphatase like domain HRE53_03350 PF02913 FAD linked oxidases, C-terminal domain HRE53_03350 PF01565 FAD binding domain HRE53_03355 PF04472 Cell division protein SepF HRE53_03360 PF02445 Quinolinate synthetase A protein HRE53_03380 PF02673 Bacitracin resistance protein BacA HRE53_03390 PF00557 Metallopeptidase family M24 HRE53_03405 PF02545 Maf-like protein HRE53_03450 PF03869 Arc-like DNA binding domain HRE53_03470 PF08264 Anticodon-binding domain of tRNA HRE53_03470 PF00133 tRNA synthetases class I (I, L, M and V) HRE53_03470 PF13603 Leucyl-tRNA synthetase, Domain 2 HRE53_03470 PF09334 tRNA synthetases class I (M) HRE53_03485 PF01850 PIN domain HRE53_03515 PF00535 Glycosyl transferase family 2 HRE53_03530 PF13439 Glycosyltransferase Family 4 HRE53_03530 PF00534 Glycosyl transferases group 1 HRE53_03535 PF00535 Glycosyl transferase family 2 HRE53_03545 PF00805 Pentapeptide repeats (8 copies) HRE53_03545 PF00069 Protein kinase domain HRE53_03550 PF01022 Bacterial regulatory protein, arsR family HRE53_03560 PF01040 UbiA prenyltransferase family HRE53_03575 PF00005 ABC transporter HRE53_03580 PF00528 Binding-protein-dependent transport system inner membrane component HRE53_03585 PF00528 Binding-protein-dependent transport system inner membrane component HRE53_03590 PF01743 Poly A polymerase head domain HRE53_03590 PF00571 CBS domain HRE53_03595 PF01737 YCF9 HRE53_03600 PF00885 6,7-dimethyl-8-ribityllumazine synthase HRE53_03610 PF00171 Aldehyde dehydrogenase family HRE53_03620 PF14437 MafB19-like deaminase HRE53_03630 PF00132 Bacterial transferase hexapeptide (six repeats) HRE53_03645 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HRE53_03645 PF02806 Alpha amylase, C-terminal all-beta domain HRE53_03645 PF00128 Alpha amylase, catalytic domain HRE53_03650 PF01171 PP-loop family HRE53_03650 PF00117 Glutamine amidotransferase class-I HRE53_03650 PF00958 GMP synthase C terminal domain HRE53_03655 PF07688 KaiA C-terminal domain HRE53_03660 PF07689 KaiB domain HRE53_03665 PF06745 KaiC HRE53_03670 PF00535 Glycosyl transferase family 2 HRE53_03670 PF13181 Tetratricopeptide repeat HRE53_03685 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HRE53_03695 PF00005 ABC transporter HRE53_03735 PF11283 Protein of unknown function (DUF3084) HRE53_03750 PF01066 CDP-alcohol phosphatidyltransferase HRE53_03760 PF01716 Manganese-stabilising protein / photosystem II polypeptide HRE53_03765 PF04542 Sigma-70 region 2 HRE53_03765 PF04539 Sigma-70 region 3 HRE53_03765 PF04545 Sigma-70, region 4 HRE53_03775 PF07859 alpha/beta hydrolase fold HRE53_03785 PF00990 Diguanylate cyclase, GGDEF domain HRE53_03785 PF03707 Bacterial signalling protein N terminal repeat HRE53_03785 PF00563 EAL domain HRE53_03805 PF02397 Bacterial sugar transferase HRE53_03815 PF00196 Bacterial regulatory proteins, luxR family HRE53_03815 PF00072 Response regulator receiver domain HRE53_03820 PF00581 Rhodanese-like domain HRE53_03820 PF00899 ThiF family HRE53_03835 PF09055 Nickel-containing superoxide dismutase HRE53_03840 PF10502 Signal peptidase, peptidase S26 HRE53_03860 PF13091 PLD-like domain HRE53_03860 PF13396 Phospholipase_D-nuclease N-terminal HRE53_03865 PF01590 GAF domain HRE53_03865 PF00990 Diguanylate cyclase, GGDEF domain HRE53_03865 PF00360 Phytochrome region HRE53_03865 PF00563 EAL domain HRE53_03875 PF01168 Alanine racemase, N-terminal domain HRE53_03885 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) HRE53_03890 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) HRE53_03915 PF00563 EAL domain HRE53_03915 PF00990 Diguanylate cyclase, GGDEF domain HRE53_03915 PF03707 Bacterial signalling protein N terminal repeat HRE53_03920 PF00202 Aminotransferase class-III HRE53_03945 PF13614 AAA domain HRE53_03950 PF03466 LysR substrate binding domain HRE53_03950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRE53_03960 PF02541 Ppx/GppA phosphatase family HRE53_03965 PF01435 Peptidase family M48 HRE53_03975 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain HRE53_03975 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase HRE53_03975 PF13288 DXP reductoisomerase C-terminal domain HRE53_03980 PF08460 Bacterial SH3 domain HRE53_03980 PF01551 Peptidase family M23 HRE53_03985 PF00563 EAL domain HRE53_03985 PF01590 GAF domain HRE53_03985 PF00990 Diguanylate cyclase, GGDEF domain HRE53_03985 PF00360 Phytochrome region HRE53_04015 PF10127 RNA repair pathway DNA polymerase beta family HRE53_04020 PF01584 CheW-like domain HRE53_04020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_04020 PF01627 Hpt domain HRE53_04020 PF00072 Response regulator receiver domain HRE53_04030 PF12729 Four helix bundle sensory module for signal transduction HRE53_04030 PF00672 HAMP domain HRE53_04030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HRE53_04040 PF00072 Response regulator receiver domain HRE53_04045 PF00072 Response regulator receiver domain HRE53_04050 PF16582 Middle domain of thiamine pyrophosphate HRE53_04050 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HRE53_04055 PF00425 chorismate binding enzyme HRE53_04060 PF01040 UbiA prenyltransferase family HRE53_04065 PF00226 DnaJ domain HRE53_04065 PF01556 DnaJ C terminal domain HRE53_04070 PF13460 NAD(P)H-binding HRE53_04075 PF01513 ATP-NAD kinase HRE53_04085 PF12826 Helix-hairpin-helix motif HRE53_04085 PF02151 UvrB/uvrC motif HRE53_04085 PF08459 UvrC Helix-hairpin-helix N-terminal HRE53_04085 PF01541 GIY-YIG catalytic domain HRE53_04090 PF08323 Starch synthase catalytic domain HRE53_04090 PF00534 Glycosyl transferases group 1 HRE53_04095 PF01241 Photosystem I psaG / psaK HRE53_04100 PF00440 Bacterial regulatory proteins, tetR family HRE53_04130 PF00872 Transposase, Mutator family HRE53_04135 PF00283 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits HRE53_04140 PF00284 Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit HRE53_04140 PF00283 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits HRE53_04145 PF01475 Ferric uptake regulator family HRE53_04165 PF00421 Photosystem II protein HRE53_04180 PF01264 Chorismate synthase HRE53_04190 PF01628 HrcA protein C terminal domain HRE53_04210 PF13356 Arm DNA-binding domain HRE53_04210 PF14659 Phage integrase, N-terminal SAM-like domain HRE53_04210 PF00589 Phage integrase family HRE53_04220 PF13356 Arm DNA-binding domain HRE53_04220 PF14659 Phage integrase, N-terminal SAM-like domain HRE53_04220 PF00589 Phage integrase family HRE53_04255 PF01551 Peptidase family M23 HRE53_04255 PF08460 Bacterial SH3 domain HRE53_04260 PF00216 Bacterial DNA-binding protein HRE53_04270 PF01740 STAS domain HRE53_04275 PF00072 Response regulator receiver domain HRE53_04275 PF00486 Transcriptional regulatory protein, C terminal HRE53_04285 PF03309 Type III pantothenate kinase HRE53_04290 PF00293 NUDIX domain HRE53_04295 PF00578 AhpC/TSA family HRE53_04310 PF00176 SNF2 family N-terminal domain HRE53_04310 PF00271 Helicase conserved C-terminal domain HRE53_04310 PF12419 SNF2 Helicase protein HRE53_04345 PF03190 Protein of unknown function, DUF255 HRE53_04370 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 HRE53_04375 PF13847 Methyltransferase domain HRE53_04380 PF00561 alpha/beta hydrolase fold HRE53_04390 PF00043 Glutathione S-transferase, C-terminal domain HRE53_04390 PF02798 Glutathione S-transferase, N-terminal domain HRE53_04405 PF00072 Response regulator receiver domain HRE53_04405 PF00989 PAS fold HRE53_04405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_04405 PF00512 His Kinase A (phospho-acceptor) domain HRE53_04405 PF01627 Hpt domain HRE53_04405 PF00497 Bacterial extracellular solute-binding proteins, family 3 HRE53_04410 PF00512 His Kinase A (phospho-acceptor) domain HRE53_04410 PF01627 Hpt domain HRE53_04410 PF00072 Response regulator receiver domain HRE53_04410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_04415 PF03793 PASTA domain HRE53_04415 PF00069 Protein kinase domain HRE53_04420 PF00672 HAMP domain HRE53_04420 PF17149 Periplasmic sensor domain found in signal transduction proteins HRE53_04420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_04420 PF00072 Response regulator receiver domain HRE53_04420 PF01627 Hpt domain HRE53_04420 PF00512 His Kinase A (phospho-acceptor) domain HRE53_04425 PF03119 NAD-dependent DNA ligase C4 zinc finger domain HRE53_04425 PF12826 Helix-hairpin-helix motif HRE53_04425 PF01653 NAD-dependent DNA ligase adenylation domain HRE53_04425 PF00533 BRCA1 C Terminus (BRCT) domain HRE53_04425 PF03120 NAD-dependent DNA ligase OB-fold domain HRE53_04445 PF00106 short chain dehydrogenase HRE53_04460 PF02979 Nitrile hydratase, alpha chain HRE53_04470 PF02492 CobW/HypB/UreG, nucleotide-binding domain HRE53_04470 PF07683 Cobalamin synthesis protein cobW C-terminal domain HRE53_04510 PF05729 NACHT domain HRE53_04510 PF00805 Pentapeptide repeats (8 copies) HRE53_04510 PF00400 WD domain, G-beta repeat HRE53_04525 PF07992 Pyridine nucleotide-disulphide oxidoreductase HRE53_04535 PF00581 Rhodanese-like domain HRE53_04540 PF13419 Haloacid dehalogenase-like hydrolase HRE53_04570 PF00266 Aminotransferase class-V HRE53_04575 PF01458 Uncharacterized protein family (UPF0051) HRE53_04580 PF00005 ABC transporter HRE53_04585 PF01458 Uncharacterized protein family (UPF0051) HRE53_04615 PF00440 Bacterial regulatory proteins, tetR family HRE53_04650 PF00872 Transposase, Mutator family HRE53_04660 PF00291 Pyridoxal-phosphate dependent enzyme HRE53_04665 PF03734 L,D-transpeptidase catalytic domain HRE53_04665 PF01476 LysM domain HRE53_04670 PF03462 PCRF domain HRE53_04670 PF00472 RF-1 domain HRE53_04675 PF01197 Ribosomal protein L31 HRE53_04680 PF00380 Ribosomal protein S9/S16 HRE53_04685 PF00572 Ribosomal protein L13 HRE53_04690 PF01416 tRNA pseudouridine synthase HRE53_04695 PF01196 Ribosomal protein L17 HRE53_04700 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain HRE53_04700 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain HRE53_04700 PF01000 RNA polymerase Rpb3/RpoA insert domain HRE53_04705 PF00411 Ribosomal protein S11 HRE53_04710 PF00416 Ribosomal protein S13/S18 HRE53_04715 PF00444 Ribosomal protein L36 HRE53_04720 PF02965 Vitamin B12 dependent methionine synthase, activation domain HRE53_04720 PF02574 Homocysteine S-methyltransferase HRE53_04720 PF02607 B12 binding domain HRE53_04720 PF02310 B12 binding domain HRE53_04720 PF00809 Pterin binding enzyme HRE53_04730 PF03009 Glycerophosphoryl diester phosphodiesterase family HRE53_04760 PF00350 Dynamin family HRE53_04770 PF00472 RF-1 domain HRE53_04775 PF01541 GIY-YIG catalytic domain HRE53_04810 PF02810 SEC-C motif HRE53_04820 PF03055 Retinal pigment epithelial membrane protein HRE53_04830 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HRE53_04830 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HRE53_04830 PF01842 ACT domain HRE53_04865 PF00421 Photosystem II protein HRE53_04875 PF00963 Cohesin domain HRE53_04875 PF00395 S-layer homology domain HRE53_04880 PF04055 Radical SAM superfamily HRE53_04895 PF00290 Tryptophan synthase alpha chain HRE53_04905 PF10716 NADH dehydrogenase transmembrane subunit HRE53_04910 PF00132 Bacterial transferase hexapeptide (six repeats) HRE53_04910 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD HRE53_04920 PF00676 Dehydrogenase E1 component HRE53_04940 PF00665 Integrase core domain HRE53_04945 PF01695 IstB-like ATP binding protein HRE53_04955 PF07963 Prokaryotic N-terminal methylation motif HRE53_04955 PF00114 Pilin (bacterial filament) HRE53_04965 PF01078 Magnesium chelatase, subunit ChlI HRE53_04965 PF13335 Magnesium chelatase, subunit ChlI C-terminal HRE53_04975 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HRE53_04975 PF00005 ABC transporter HRE53_04980 PF00037 4Fe-4S binding domain HRE53_04985 PF00005 ABC transporter HRE53_05000 PF00421 Photosystem II protein HRE53_05005 PF00421 Photosystem II protein HRE53_05015 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HRE53_05020 PF01409 tRNA synthetases class II core domain (F) HRE53_05020 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain HRE53_05025 PF01207 Dihydrouridine synthase (Dus) HRE53_05030 PF01432 Peptidase family M3 HRE53_05035 PF00805 Pentapeptide repeats (8 copies) HRE53_05035 PF00069 Protein kinase domain HRE53_05040 PF01590 GAF domain HRE53_05040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HRE53_05045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_05045 PF00072 Response regulator receiver domain HRE53_05050 PF02941 Ferredoxin thioredoxin reductase variable alpha chain HRE53_05055 PF00994 Probable molybdopterin binding domain HRE53_05055 PF03454 MoeA C-terminal region (domain IV) HRE53_05055 PF03453 MoeA N-terminal region (domain I and II) HRE53_05065 PF00258 Flavodoxin HRE53_05065 PF01613 Flavin reductase like domain HRE53_05075 PF01613 Flavin reductase like domain HRE53_05075 PF00753 Metallo-beta-lactamase superfamily HRE53_05090 PF00793 DAHP synthetase I family HRE53_05110 PF10415 Fumarase C C-terminus HRE53_05110 PF00206 Lyase HRE53_05130 PF00263 Bacterial type II and III secretion system protein HRE53_05130 PF03958 Bacterial type II/III secretion system short domain HRE53_05135 PF00834 Ribulose-phosphate 3 epimerase family HRE53_05140 PF00924 Mechanosensitive ion channel HRE53_05140 PF12794 Mechanosensitive ion channel inner membrane domain 1 HRE53_05140 PF12795 Mechanosensitive ion channel porin domain HRE53_05145 PF00211 Adenylate and Guanylate cyclase catalytic domain HRE53_05150 PF03109 ABC1 family HRE53_05155 PF01225 Mur ligase family, catalytic domain HRE53_05155 PF02875 Mur ligase family, glutamate ligase domain HRE53_05155 PF08245 Mur ligase middle domain HRE53_05175 PF07687 Peptidase dimerisation domain HRE53_05175 PF01546 Peptidase family M20/M25/M40 HRE53_05200 PF04168 A predicted alpha-helical domain with a conserved ER motif. HRE53_05200 PF14403 Circularly permuted ATP-grasp type 2 HRE53_05205 PF14403 Circularly permuted ATP-grasp type 2 HRE53_05210 PF00990 Diguanylate cyclase, GGDEF domain HRE53_05210 PF00563 EAL domain HRE53_05210 PF08448 PAS fold HRE53_05215 PF00586 AIR synthase related protein, N-terminal domain HRE53_05215 PF02769 AIR synthase related protein, C-terminal domain HRE53_05255 PF00350 Dynamin family HRE53_05260 PF00931 NB-ARC domain HRE53_05260 PF00400 WD domain, G-beta repeat HRE53_05265 PF00350 Dynamin family HRE53_05270 PF13419 Haloacid dehalogenase-like hydrolase HRE53_05275 PF00580 UvrD/REP helicase N-terminal domain HRE53_05275 PF13361 UvrD-like helicase C-terminal domain HRE53_05285 PF00117 Glutamine amidotransferase class-I HRE53_05290 PF01219 Prokaryotic diacylglycerol kinase HRE53_05295 PF02130 Uncharacterized protein family UPF0054 HRE53_05310 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase HRE53_05315 PF08669 Glycine cleavage T-protein C-terminal barrel domain HRE53_05315 PF01571 Aminomethyltransferase folate-binding domain HRE53_05320 PF02605 Photosystem I reaction centre subunit XI HRE53_05325 PF03853 YjeF-related protein N-terminus HRE53_05325 PF01256 Carbohydrate kinase HRE53_05330 PF01701 Photosystem I reaction centre subunit IX / PsaJ HRE53_05335 PF02507 Photosystem I reaction centre subunit III HRE53_05340 PF00814 Glycoprotease family HRE53_05345 PF02535 ZIP Zinc transporter HRE53_05350 PF12146 Serine aminopeptidase, S33 HRE53_05355 PF00313 'Cold-shock' DNA-binding domain HRE53_05360 PF00148 Nitrogenase component 1 type Oxidoreductase HRE53_05365 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family HRE53_05375 PF01883 Iron-sulfur cluster assembly protein HRE53_05375 PF10609 NUBPL iron-transfer P-loop NTPase HRE53_05380 PF01098 Cell cycle protein HRE53_05395 PF00575 S1 RNA binding domain HRE53_05400 PF02469 Fasciclin domain HRE53_05415 PF00753 Metallo-beta-lactamase superfamily HRE53_05415 PF16123 Hydroxyacylglutathione hydrolase C-terminus HRE53_05435 PF00202 Aminotransferase class-III HRE53_05450 PF00011 Hsp20/alpha crystallin family HRE53_05470 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system HRE53_05475 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system HRE53_05480 PF01593 Flavin containing amine oxidoreductase HRE53_05490 PF17912 MalK OB fold domain HRE53_05490 PF00005 ABC transporter HRE53_05500 PF00486 Transcriptional regulatory protein, C terminal HRE53_05500 PF00072 Response regulator receiver domain HRE53_05505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_05505 PF00512 His Kinase A (phospho-acceptor) domain HRE53_05505 PF00672 HAMP domain HRE53_05505 PF13426 PAS domain HRE53_05530 PF02325 YGGT family HRE53_05550 PF08032 RNA 2'-O ribose methyltransferase substrate binding HRE53_05550 PF00588 SpoU rRNA Methylase family HRE53_05560 PF03951 Glutamine synthetase, beta-Grasp domain HRE53_05560 PF00120 Glutamine synthetase, catalytic domain HRE53_05570 PF00072 Response regulator receiver domain HRE53_05570 PF09308 LuxQ, periplasmic HRE53_05570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_05570 PF00512 His Kinase A (phospho-acceptor) domain HRE53_05575 PF00072 Response regulator receiver domain HRE53_05580 PF00486 Transcriptional regulatory protein, C terminal HRE53_05580 PF00072 Response regulator receiver domain HRE53_05580 PF01627 Hpt domain HRE53_05595 PF00571 CBS domain HRE53_05595 PF01769 Divalent cation transporter HRE53_05595 PF03448 MgtE intracellular N domain HRE53_05605 PF01116 Fructose-bisphosphate aldolase class-II HRE53_05610 PF04225 Opacity-associated protein A LysM-like domain HRE53_05610 PF01551 Peptidase family M23 HRE53_05615 PF00588 SpoU rRNA Methylase family HRE53_05620 PF04107 Glutamate-cysteine ligase family 2(GCS2) HRE53_05630 PF00977 Histidine biosynthesis protein HRE53_05700 PF02875 Mur ligase family, glutamate ligase domain HRE53_05700 PF08245 Mur ligase middle domain HRE53_05705 PF08240 Alcohol dehydrogenase GroES-like domain HRE53_05705 PF00107 Zinc-binding dehydrogenase HRE53_05715 PF06838 Methionine gamma-lyase HRE53_05720 PF01106 NifU-like domain HRE53_05730 PF01597 Glycine cleavage H-protein HRE53_05735 PF08669 Glycine cleavage T-protein C-terminal barrel domain HRE53_05735 PF01571 Aminomethyltransferase folate-binding domain HRE53_05760 PF13683 Integrase core domain HRE53_05760 PF01610 Transposase HRE53_05785 PF08369 Proto-chlorophyllide reductase 57 kD subunit HRE53_05785 PF00148 Nitrogenase component 1 type Oxidoreductase HRE53_05790 PF03129 Anticodon binding domain HRE53_05790 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HRE53_05790 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HRE53_05830 PF01638 HxlR-like helix-turn-helix HRE53_05835 PF00497 Bacterial extracellular solute-binding proteins, family 3 HRE53_05845 PF00950 ABC 3 transport family HRE53_05850 PF00005 ABC transporter HRE53_05855 PF01297 Zinc-uptake complex component A periplasmic HRE53_05865 PF00072 Response regulator receiver domain HRE53_05865 PF01627 Hpt domain HRE53_05865 PF00512 His Kinase A (phospho-acceptor) domain HRE53_05865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_05895 PF01209 ubiE/COQ5 methyltransferase family HRE53_05935 PF00872 Transposase, Mutator family HRE53_05940 PF00805 Pentapeptide repeats (8 copies) HRE53_05940 PF00069 Protein kinase domain HRE53_05945 PF00535 Glycosyl transferase family 2 HRE53_05995 PF00069 Protein kinase domain HRE53_05995 PF00805 Pentapeptide repeats (8 copies) HRE53_06000 PF01370 NAD dependent epimerase/dehydratase family HRE53_06015 PF00005 ABC transporter HRE53_06045 PF08240 Alcohol dehydrogenase GroES-like domain HRE53_06045 PF00107 Zinc-binding dehydrogenase HRE53_06050 PF00378 Enoyl-CoA hydratase/isomerase HRE53_06050 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HRE53_06050 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HRE53_06055 PF00296 Luciferase-like monooxygenase HRE53_06060 PF00106 short chain dehydrogenase HRE53_06080 PF00360 Phytochrome region HRE53_06080 PF00990 Diguanylate cyclase, GGDEF domain HRE53_06080 PF00563 EAL domain HRE53_06080 PF01590 GAF domain HRE53_06095 PF00291 Pyridoxal-phosphate dependent enzyme HRE53_06105 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase HRE53_06110 PF01180 Dihydroorotate dehydrogenase HRE53_06125 PF01676 Metalloenzyme superfamily HRE53_06125 PF06415 BPG-independent PGAM N-terminus (iPGM_N) HRE53_06135 PF00391 PEP-utilising enzyme, mobile domain HRE53_06135 PF02896 PEP-utilising enzyme, TIM barrel domain HRE53_06135 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HRE53_06140 PF00582 Universal stress protein family HRE53_06150 PF00072 Response regulator receiver domain HRE53_06160 PF00111 2Fe-2S iron-sulfur cluster binding domain HRE53_06165 PF11909 NADH-quinone oxidoreductase cyanobacterial subunit N HRE53_06185 PF00672 HAMP domain HRE53_06185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_06185 PF00512 His Kinase A (phospho-acceptor) domain HRE53_06185 PF00989 PAS fold HRE53_06190 PF13426 PAS domain HRE53_06190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_06190 PF00672 HAMP domain HRE53_06190 PF00512 His Kinase A (phospho-acceptor) domain HRE53_06225 PF03793 PASTA domain HRE53_06225 PF00069 Protein kinase domain HRE53_06245 PF12838 4Fe-4S dicluster domain HRE53_06255 PF00310 Glutamine amidotransferases class-II HRE53_06255 PF04898 Glutamate synthase central domain HRE53_06255 PF01645 Conserved region in glutamate synthase HRE53_06255 PF01493 GXGXG motif HRE53_06260 PF00072 Response regulator receiver domain HRE53_06260 PF18415 Histidine kinase receptor ArcB trans-membrane domain HRE53_06260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_06260 PF00989 PAS fold HRE53_06260 PF00512 His Kinase A (phospho-acceptor) domain HRE53_06260 PF01627 Hpt domain HRE53_06265 PF00072 Response regulator receiver domain HRE53_06275 PF13230 Glutamine amidotransferases class-II HRE53_06290 PF02463 RecF/RecN/SMC N terminal domain HRE53_06295 PF01612 3'-5' exonuclease HRE53_06295 PF00570 HRDC domain HRE53_06310 PF00583 Acetyltransferase (GNAT) family HRE53_06330 PF03109 ABC1 family HRE53_06335 PF00982 Glycosyltransferase family 20 HRE53_06345 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HRE53_06345 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HRE53_06355 PF09506 Glucosylglycerol-phosphate phosphatase (Salt_tol_Pase) HRE53_06360 PF02310 B12 binding domain HRE53_06360 PF13282 Domain of unknown function (DUF4070) HRE53_06360 PF04055 Radical SAM superfamily HRE53_06370 PF00781 Diacylglycerol kinase catalytic domain HRE53_06380 PF01066 CDP-alcohol phosphatidyltransferase HRE53_06385 PF04055 Radical SAM superfamily HRE53_06400 PF04055 Radical SAM superfamily HRE53_06400 PF18693 TRAM domain HRE53_06400 PF00919 Uncharacterized protein family UPF0004 HRE53_06405 PF00271 Helicase conserved C-terminal domain HRE53_06405 PF00270 DEAD/DEAH box helicase HRE53_06415 PF02654 Cobalamin-5-phosphate synthase HRE53_06420 PF10150 Ribonuclease E/G family HRE53_06425 PF01738 Dienelactone hydrolase family HRE53_06430 PF00392 Bacterial regulatory proteins, gntR family HRE53_06435 PF00092 von Willebrand factor type A domain HRE53_06450 PF00675 Insulinase (Peptidase family M16) HRE53_06450 PF05193 Peptidase M16 inactive domain HRE53_06470 PF00035 Double-stranded RNA binding motif HRE53_06470 PF00636 Ribonuclease III domain HRE53_06475 PF01578 Cytochrome C assembly protein HRE53_06480 PF00684 DnaJ central domain HRE53_06480 PF01556 DnaJ C terminal domain HRE53_06480 PF00226 DnaJ domain HRE53_06485 PF01171 PP-loop family HRE53_06485 PF09179 TilS substrate binding domain HRE53_06510 PF03707 Bacterial signalling protein N terminal repeat HRE53_06510 PF00990 Diguanylate cyclase, GGDEF domain HRE53_06510 PF00563 EAL domain HRE53_06515 PF00072 Response regulator receiver domain HRE53_06520 PF00360 Phytochrome region HRE53_06520 PF08446 PAS fold HRE53_06520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_06520 PF00512 His Kinase A (phospho-acceptor) domain HRE53_06520 PF01590 GAF domain HRE53_06525 PF01926 50S ribosome-binding GTPase HRE53_06525 PF12631 MnmE helical domain HRE53_06525 PF10396 GTP-binding protein TrmE N-terminus HRE53_06550 PF06968 Biotin and Thiamin Synthesis associated domain HRE53_06550 PF04055 Radical SAM superfamily HRE53_06560 PF00579 tRNA synthetases class I (W and Y) HRE53_06575 PF08245 Mur ligase middle domain HRE53_06575 PF02875 Mur ligase family, glutamate ligase domain HRE53_06600 PF00005 ABC transporter HRE53_06600 PF00664 ABC transporter transmembrane region HRE53_06605 PF17092 Penicillin-binding protein OB-like domain HRE53_06605 PF00912 Transglycosylase HRE53_06605 PF00905 Penicillin binding protein transpeptidase domain HRE53_06610 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HRE53_06620 PF10693 Protein of unknown function (DUF2499) HRE53_06630 PF03033 Glycosyltransferase family 28 N-terminal domain HRE53_06630 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase HRE53_06640 PF02342 TerD domain HRE53_06645 PF00288 GHMP kinases N terminal domain HRE53_06645 PF08544 GHMP kinases C terminal HRE53_06650 PF00398 Ribosomal RNA adenine dimethylase HRE53_06675 PF00529 HlyD membrane-fusion protein of T1SS HRE53_06675 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HRE53_06680 PF00664 ABC transporter transmembrane region HRE53_06680 PF00005 ABC transporter HRE53_06680 PF03412 Peptidase C39 family HRE53_06710 PF01926 50S ribosome-binding GTPase HRE53_06710 PF12631 MnmE helical domain HRE53_06710 PF10396 GTP-binding protein TrmE N-terminus HRE53_06715 PF00529 HlyD membrane-fusion protein of T1SS HRE53_06715 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HRE53_06720 PF00873 AcrB/AcrD/AcrF family HRE53_06735 PF00384 Molybdopterin oxidoreductase HRE53_06735 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HRE53_06735 PF01568 Molydopterin dinucleotide binding domain HRE53_06745 PF18579 Rubisco accumulation factor 1 helix turn helix domain HRE53_06745 PF18578 Rubisco accumulation factor 1 alpha helical domain HRE53_06745 PF18087 Rubisco Assembly chaperone C-terminal domain HRE53_06750 PF00004 ATPase family associated with various cellular activities (AAA) HRE53_06750 PF00101 Ribulose bisphosphate carboxylase, small chain HRE53_06760 PF00101 Ribulose bisphosphate carboxylase, small chain HRE53_06765 PF02341 RbcX protein HRE53_06770 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain HRE53_06770 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain HRE53_06780 PF00583 Acetyltransferase (GNAT) family HRE53_06795 PF00795 Carbon-nitrogen hydrolase HRE53_06805 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HRE53_06815 PF00338 Ribosomal protein S10p/S20e HRE53_06820 PF00009 Elongation factor Tu GTP binding domain HRE53_06820 PF03143 Elongation factor Tu C-terminal domain HRE53_06820 PF03144 Elongation factor Tu domain 2 HRE53_06825 PF00009 Elongation factor Tu GTP binding domain HRE53_06825 PF03144 Elongation factor Tu domain 2 HRE53_06825 PF14492 Elongation Factor G, domain II HRE53_06825 PF00679 Elongation factor G C-terminus HRE53_06825 PF03764 Elongation factor G, domain IV HRE53_06830 PF00177 Ribosomal protein S7p/S5e HRE53_06835 PF00164 Ribosomal protein S12/S23 HRE53_06840 PF02575 YbaB/EbfC DNA-binding family HRE53_06845 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HRE53_06845 PF01565 FAD binding domain HRE53_06850 PF01225 Mur ligase family, catalytic domain HRE53_06850 PF02875 Mur ligase family, glutamate ligase domain HRE53_06850 PF08245 Mur ligase middle domain HRE53_06855 PF00588 SpoU rRNA Methylase family HRE53_06880 PF01926 50S ribosome-binding GTPase HRE53_06880 PF01018 GTP1/OBG HRE53_06885 PF00072 Response regulator receiver domain HRE53_06885 PF00486 Transcriptional regulatory protein, C terminal HRE53_06895 PF05140 ResB-like family HRE53_06905 PF01098 Cell cycle protein HRE53_06910 PF13380 CoA binding domain HRE53_06910 PF13607 Succinyl-CoA ligase like flavodoxin domain HRE53_06910 PF00583 Acetyltransferase (GNAT) family HRE53_06920 PF04966 Carbohydrate-selective porin, OprB family HRE53_06920 PF00395 S-layer homology domain HRE53_06940 PF00210 Ferritin-like domain HRE53_06945 PF00005 ABC transporter HRE53_06970 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HRE53_06970 PF01926 50S ribosome-binding GTPase HRE53_06985 PF01740 STAS domain HRE53_06985 PF00916 Sulfate permease family HRE53_06990 PF04545 Sigma-70, region 4 HRE53_06990 PF04539 Sigma-70 region 3 HRE53_06990 PF04542 Sigma-70 region 2 HRE53_06990 PF00140 Sigma-70 factor, region 1.2 HRE53_06995 PF00403 Heavy-metal-associated domain HRE53_07000 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family HRE53_07015 PF04228 Putative neutral zinc metallopeptidase HRE53_07035 PF01842 ACT domain HRE53_07035 PF00800 Prephenate dehydratase HRE53_07035 PF01817 Chorismate mutase type II HRE53_07050 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HRE53_07055 PF00528 Binding-protein-dependent transport system inner membrane component HRE53_07070 PF01709 Transcriptional regulator HRE53_07075 PF03808 Glycosyl transferase WecB/TagA/CpsF family HRE53_07080 PF00005 ABC transporter HRE53_07085 PF02687 FtsX-like permease family HRE53_07085 PF18075 FtsX extracellular domain HRE53_07105 PF00069 Protein kinase domain HRE53_07110 PF00106 short chain dehydrogenase HRE53_07125 PF04820 Tryptophan halogenase HRE53_07135 PF11016 Protein of unknown function (DUF2854) HRE53_07140 PF04461 Protein of unknown function (DUF520) HRE53_07145 PF00171 Aldehyde dehydrogenase family HRE53_07150 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HRE53_07150 PF00205 Thiamine pyrophosphate enzyme, central domain HRE53_07150 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HRE53_07160 PF00478 IMP dehydrogenase / GMP reductase domain HRE53_07165 PF00085 Thioredoxin HRE53_07175 PF00672 HAMP domain HRE53_07175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_07175 PF00512 His Kinase A (phospho-acceptor) domain HRE53_07175 PF01627 Hpt domain HRE53_07175 PF00072 Response regulator receiver domain HRE53_07175 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HRE53_07180 PF00440 Bacterial regulatory proteins, tetR family HRE53_07195 PF01965 DJ-1/PfpI family HRE53_07230 PF00155 Aminotransferase class I and II HRE53_07235 PF00581 Rhodanese-like domain HRE53_07245 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HRE53_07245 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HRE53_07255 PF00005 ABC transporter HRE53_07290 PF01757 Acyltransferase family HRE53_07310 PF13439 Glycosyltransferase Family 4 HRE53_07315 PF00534 Glycosyl transferases group 1 HRE53_07315 PF13439 Glycosyltransferase Family 4 HRE53_07340 PF00534 Glycosyl transferases group 1 HRE53_07350 PF13847 Methyltransferase domain HRE53_07350 PF03551 Transcriptional regulator PadR-like family HRE53_07360 PF02706 Chain length determinant protein HRE53_07360 PF13807 G-rich domain on putative tyrosine kinase HRE53_07360 PF13614 AAA domain HRE53_07370 PF00005 ABC transporter HRE53_07385 PF00733 Asparagine synthase HRE53_07385 PF13537 Glutamine amidotransferase domain HRE53_07390 PF08007 Cupin superfamily protein HRE53_07395 PF02603 HPr Serine kinase N terminus HRE53_07395 PF07475 HPr Serine kinase C-terminal domain HRE53_07420 PF01546 Peptidase family M20/M25/M40 HRE53_07420 PF07687 Peptidase dimerisation domain HRE53_07430 PF03747 ADP-ribosylglycohydrolase HRE53_07440 PF02390 Putative methyltransferase HRE53_07445 PF00483 Nucleotidyl transferase HRE53_07450 PF12323 Helix-turn-helix domain HRE53_07450 PF01385 Probable transposase HRE53_07450 PF07282 Putative transposase DNA-binding domain HRE53_07465 PF01250 Ribosomal protein S6 HRE53_07470 PF12792 CSS motif domain associated with EAL HRE53_07470 PF00563 EAL domain HRE53_07475 PF16166 Chloroplast import apparatus Tic20-like HRE53_07480 PF16166 Chloroplast import apparatus Tic20-like HRE53_07490 PF00464 Serine hydroxymethyltransferase HRE53_07515 PF01220 Dehydroquinase class II HRE53_07520 PF00005 ABC transporter HRE53_07520 PF16326 ABC transporter C-terminal domain HRE53_07520 PF12848 ABC transporter HRE53_07530 PF00583 Acetyltransferase (GNAT) family HRE53_07535 PF17871 AAA lid domain HRE53_07535 PF02861 Clp amino terminal domain, pathogenicity island component HRE53_07535 PF10431 C-terminal, D2-small domain, of ClpB protein HRE53_07535 PF00004 ATPase family associated with various cellular activities (AAA) HRE53_07535 PF07724 AAA domain (Cdc48 subfamily) HRE53_07540 PF01545 Cation efflux family HRE53_07540 PF16916 Dimerisation domain of Zinc Transporter HRE53_07550 PF03330 Lytic transglycolase HRE53_07565 PF01171 PP-loop family HRE53_07605 PF00762 Ferrochelatase HRE53_07610 PF00486 Transcriptional regulatory protein, C terminal HRE53_07610 PF00072 Response regulator receiver domain HRE53_07620 PF00034 Cytochrome c HRE53_07620 PF14376 Haem-binding domain HRE53_07620 PF03150 Di-haem cytochrome c peroxidase HRE53_07625 PF00072 Response regulator receiver domain HRE53_07625 PF09308 LuxQ, periplasmic HRE53_07625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_07625 PF00512 His Kinase A (phospho-acceptor) domain HRE53_07645 PF03437 BtpA family HRE53_07650 PF13180 PDZ domain HRE53_07655 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HRE53_07675 PF01926 50S ribosome-binding GTPase HRE53_07695 PF02577 Bifunctional nuclease HRE53_07700 PF00677 Lumazine binding domain HRE53_07725 PF05114 Protein of unknown function (DUF692) HRE53_07740 PF03965 Penicillinase repressor HRE53_07775 PF01661 Macro domain HRE53_07785 PF01794 Ferric reductase like transmembrane component HRE53_07805 PF01593 Flavin containing amine oxidoreductase HRE53_07835 PF01903 CbiX HRE53_07850 PF00171 Aldehyde dehydrogenase family HRE53_07865 PF13580 SIS domain HRE53_07870 PF00248 Aldo/keto reductase family HRE53_07880 PF01336 OB-fold nucleic acid binding domain HRE53_07880 PF00152 tRNA synthetases class II (D, K and N) HRE53_07890 PF08323 Starch synthase catalytic domain HRE53_07890 PF00534 Glycosyl transferases group 1 HRE53_07895 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) HRE53_07900 PF05151 Photosystem II reaction centre M protein (PsbM) HRE53_07910 PF00421 Photosystem II protein HRE53_07915 PF01405 Photosystem II reaction centre T protein HRE53_07920 PF01782 RimM N-terminal domain HRE53_07920 PF05239 PRC-barrel domain HRE53_07925 PF00155 Aminotransferase class I and II HRE53_07945 PF01425 Amidase HRE53_07955 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase HRE53_07985 PF01131 DNA topoisomerase HRE53_07985 PF01751 Toprim domain HRE53_07985 PF13368 Topoisomerase C-terminal repeat HRE53_07990 PF00361 Proton-conducting membrane transporter HRE53_07995 PF00175 Oxidoreductase NAD-binding domain HRE53_08010 PF02548 Ketopantoate hydroxymethyltransferase HRE53_08015 PF00117 Glutamine amidotransferase class-I HRE53_08030 PF02529 Cytochrome B6-F complex subunit 5 HRE53_08075 PF00012 Hsp70 protein HRE53_08085 PF01370 NAD dependent epimerase/dehydratase family HRE53_08090 PF00953 Glycosyl transferase family 4 HRE53_08095 PF01842 ACT domain HRE53_08095 PF00742 Homoserine dehydrogenase HRE53_08095 PF03447 Homoserine dehydrogenase, NAD binding domain HRE53_08105 PF08238 Sel1 repeat HRE53_08110 PF00583 Acetyltransferase (GNAT) family HRE53_08125 PF02403 Seryl-tRNA synthetase N-terminal domain HRE53_08125 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HRE53_08130 PF01343 Peptidase family S49 HRE53_08140 PF01965 DJ-1/PfpI family HRE53_08140 PF12833 Helix-turn-helix domain HRE53_08160 PF00528 Binding-protein-dependent transport system inner membrane component HRE53_08160 PF12911 N-terminal TM domain of oligopeptide transport permease C HRE53_08165 PF00528 Binding-protein-dependent transport system inner membrane component HRE53_08170 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HRE53_08180 PF03572 Peptidase family S41 HRE53_08180 PF00595 PDZ domain HRE53_08190 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HRE53_08195 PF03150 Di-haem cytochrome c peroxidase HRE53_08195 PF00034 Cytochrome c HRE53_08200 PF12792 CSS motif domain associated with EAL HRE53_08200 PF00563 EAL domain HRE53_08210 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain HRE53_08210 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HRE53_08230 PF13358 DDE superfamily endonuclease HRE53_08245 PF02446 4-alpha-glucanotransferase HRE53_08270 PF04539 Sigma-70 region 3 HRE53_08270 PF04542 Sigma-70 region 2 HRE53_08270 PF04545 Sigma-70, region 4 HRE53_08270 PF00140 Sigma-70 factor, region 1.2 HRE53_08275 PF01475 Ferric uptake regulator family HRE53_08285 PF00485 Phosphoribulokinase / Uridine kinase family HRE53_08290 PF00343 Carbohydrate phosphorylase HRE53_08295 PF01641 SelR domain HRE53_08305 PF00561 alpha/beta hydrolase fold HRE53_08305 PF08386 TAP-like protein HRE53_08310 PF10369 Small subunit of acetolactate synthase HRE53_08320 PF06596 Photosystem II reaction centre X protein (PsbX) HRE53_08325 PF02325 YGGT family HRE53_08330 PF00289 Biotin carboxylase, N-terminal domain HRE53_08330 PF02785 Biotin carboxylase C-terminal domain HRE53_08330 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HRE53_08340 PF00453 Ribosomal protein L20 HRE53_08345 PF01632 Ribosomal protein L35 HRE53_08350 PF02861 Clp amino terminal domain, pathogenicity island component HRE53_08350 PF00004 ATPase family associated with various cellular activities (AAA) HRE53_08350 PF07724 AAA domain (Cdc48 subfamily) HRE53_08350 PF17871 AAA lid domain HRE53_08350 PF10431 C-terminal, D2-small domain, of ClpB protein HRE53_08355 PF00361 Proton-conducting membrane transporter HRE53_08360 PF00361 Proton-conducting membrane transporter HRE53_08360 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus HRE53_08360 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HRE53_08370 PF00004 ATPase family associated with various cellular activities (AAA) HRE53_08370 PF17862 AAA+ lid domain HRE53_08370 PF06480 FtsH Extracellular HRE53_08370 PF01434 Peptidase family M41 HRE53_08375 PF00795 Carbon-nitrogen hydrolase HRE53_08380 PF00999 Sodium/hydrogen exchanger family HRE53_08385 PF11741 AMIN domain HRE53_08385 PF01520 N-acetylmuramoyl-L-alanine amidase HRE53_08390 PF00056 lactate/malate dehydrogenase, NAD binding domain HRE53_08390 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HRE53_08395 PF11910 Cyanobacterial and plant NDH-1 subunit O HRE53_08440 PF01367 5'-3' exonuclease, C-terminal SAM fold HRE53_08440 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HRE53_08440 PF00476 DNA polymerase family A HRE53_08440 PF01612 3'-5' exonuclease HRE53_08465 PF00300 Histidine phosphatase superfamily (branch 1) HRE53_08470 PF00285 Citrate synthase, C-terminal domain HRE53_08475 PF00146 NADH dehydrogenase HRE53_08480 PF12838 4Fe-4S dicluster domain HRE53_08485 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 HRE53_08490 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HRE53_08495 PF01694 Rhomboid family HRE53_08500 PF17755 UvrA DNA-binding domain HRE53_08500 PF17760 UvrA interaction domain HRE53_08515 PF01494 FAD binding domain HRE53_08540 PF00436 Single-strand binding protein family HRE53_08545 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HRE53_08545 PF02843 Phosphoribosylglycinamide synthetase, C domain HRE53_08545 PF02844 Phosphoribosylglycinamide synthetase, N domain HRE53_08575 PF01061 ABC-2 type transporter HRE53_08575 PF00005 ABC transporter HRE53_08575 PF00498 FHA domain HRE53_08580 PF00069 Protein kinase domain HRE53_08580 PF03793 PASTA domain HRE53_08585 PF01595 Cyclin M transmembrane N-terminal domain HRE53_08585 PF03471 Transporter associated domain HRE53_08585 PF00571 CBS domain HRE53_08590 PF00528 Binding-protein-dependent transport system inner membrane component HRE53_08595 PF01134 Glucose inhibited division protein A HRE53_08595 PF13932 GidA associated domain HRE53_08620 PF00483 Nucleotidyl transferase HRE53_08625 PF16363 GDP-mannose 4,6 dehydratase HRE53_08630 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase HRE53_08645 PF00571 CBS domain HRE53_08645 PF01380 SIS domain HRE53_08650 PF02348 Cytidylyltransferase HRE53_08675 PF01757 Acyltransferase family HRE53_08760 PF00072 Response regulator receiver domain HRE53_08780 PF13538 UvrD-like helicase C-terminal domain HRE53_08790 PF07885 Ion channel HRE53_08815 PF08448 PAS fold HRE53_08815 PF00563 EAL domain HRE53_08815 PF00990 Diguanylate cyclase, GGDEF domain HRE53_08825 PF00795 Carbon-nitrogen hydrolase HRE53_08845 PF02769 AIR synthase related protein, C-terminal domain HRE53_08845 PF00586 AIR synthase related protein, N-terminal domain HRE53_08855 PF01420 Type I restriction modification DNA specificity domain HRE53_08900 PF13439 Glycosyltransferase Family 4 HRE53_08900 PF00534 Glycosyl transferases group 1 HRE53_08910 PF00196 Bacterial regulatory proteins, luxR family HRE53_08910 PF00072 Response regulator receiver domain HRE53_08950 PF00462 Glutaredoxin HRE53_08965 PF00781 Diacylglycerol kinase catalytic domain HRE53_08965 PF02142 MGS-like domain HRE53_08970 PF02798 Glutathione S-transferase, N-terminal domain HRE53_08990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRE53_08990 PF03466 LysR substrate binding domain HRE53_09005 PF00266 Aminotransferase class-V HRE53_09010 PF01192 RNA polymerase Rpb6 HRE53_09030 PF00483 Nucleotidyl transferase HRE53_09035 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded HRE53_09045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRE53_09045 PF03466 LysR substrate binding domain HRE53_09055 PF13673 Acetyltransferase (GNAT) domain HRE53_09055 PF04229 GrpB protein HRE53_09080 PF09154 Domain of unknown function (DUF1939) HRE53_09080 PF00128 Alpha amylase, catalytic domain HRE53_09085 PF02915 Rubrerythrin HRE53_09090 PF00155 Aminotransferase class I and II HRE53_09115 PF00005 ABC transporter HRE53_09115 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HRE53_09125 PF00561 alpha/beta hydrolase fold HRE53_09150 PF03023 Lipid II flippase MurJ HRE53_09165 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family HRE53_09170 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family HRE53_09175 PF03466 LysR substrate binding domain HRE53_09175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRE53_09180 PF03023 Lipid II flippase MurJ HRE53_09190 PF00563 EAL domain HRE53_09190 PF00498 FHA domain HRE53_09190 PF00990 Diguanylate cyclase, GGDEF domain HRE53_09195 PF00106 short chain dehydrogenase HRE53_09200 PF00719 Inorganic pyrophosphatase HRE53_09210 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HRE53_09235 PF08264 Anticodon-binding domain of tRNA HRE53_09235 PF00133 tRNA synthetases class I (I, L, M and V) HRE53_09235 PF09334 tRNA synthetases class I (M) HRE53_09255 PF00005 ABC transporter HRE53_09255 PF17850 CysA C-terminal regulatory domain HRE53_09255 PF12857 TOBE-like domain HRE53_09270 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HRE53_09270 PF04073 Aminoacyl-tRNA editing domain HRE53_09270 PF03129 Anticodon binding domain HRE53_09290 PF01699 Sodium/calcium exchanger protein HRE53_09310 PF00574 Clp protease HRE53_09315 PF00574 Clp protease HRE53_09320 PF00891 O-methyltransferase domain HRE53_09325 PF01817 Chorismate mutase type II HRE53_09335 PF00005 ABC transporter HRE53_09350 PF03062 MBOAT, membrane-bound O-acyltransferase family HRE53_09355 PF01479 S4 domain HRE53_09355 PF00849 RNA pseudouridylate synthase HRE53_09370 PF04542 Sigma-70 region 2 HRE53_09370 PF00140 Sigma-70 factor, region 1.2 HRE53_09370 PF04545 Sigma-70, region 4 HRE53_09370 PF04539 Sigma-70 region 3 HRE53_09375 PF03749 Sugar fermentation stimulation protein RE domain HRE53_09375 PF17746 SfsA N-terminal OB domain HRE53_09385 PF04055 Radical SAM superfamily HRE53_09390 PF06508 Queuosine biosynthesis protein QueC HRE53_09405 PF00391 PEP-utilising enzyme, mobile domain HRE53_09405 PF02896 PEP-utilising enzyme, TIM barrel domain HRE53_09405 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HRE53_09410 PF10674 Protein of unknown function (DUF2488) HRE53_09415 PF01678 Diaminopimelate epimerase HRE53_09430 PF01551 Peptidase family M23 HRE53_09430 PF08525 Opacity-associated protein A N-terminal motif HRE53_09430 PF01476 LysM domain HRE53_09440 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HRE53_09450 PF01494 FAD binding domain HRE53_09455 PF02261 Aspartate decarboxylase HRE53_09470 PF17863 AAA lid domain HRE53_09470 PF07726 ATPase family associated with various cellular activities (AAA) HRE53_09490 PF16363 GDP-mannose 4,6 dehydratase HRE53_09495 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HRE53_09495 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HRE53_09495 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HRE53_09500 PF01427 D-ala-D-ala dipeptidase HRE53_09530 PF01380 SIS domain HRE53_09535 PF00502 Phycobilisome protein HRE53_09550 PF03477 ATP cone domain HRE53_09550 PF02867 Ribonucleotide reductase, barrel domain HRE53_09550 PF00317 Ribonucleotide reductase, all-alpha domain HRE53_09570 PF00990 Diguanylate cyclase, GGDEF domain HRE53_09570 PF00498 FHA domain HRE53_09570 PF00563 EAL domain HRE53_09620 PF00929 Exonuclease HRE53_09620 PF14579 Helix-hairpin-helix motif HRE53_09620 PF02811 PHP domain HRE53_09620 PF07733 Bacterial DNA polymerase III alpha NTPase domain HRE53_09620 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HRE53_09655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRE53_09655 PF03466 LysR substrate binding domain HRE53_09660 PF02779 Transketolase, pyrimidine binding domain HRE53_09660 PF02780 Transketolase, C-terminal domain HRE53_09660 PF00456 Transketolase, thiamine diphosphate binding domain HRE53_09670 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) HRE53_09675 PF00291 Pyridoxal-phosphate dependent enzyme HRE53_09685 PF06750 Bacterial Peptidase A24 N-terminal domain HRE53_09685 PF01478 Type IV leader peptidase family HRE53_09700 PF01329 Pterin 4 alpha carbinolamine dehydratase HRE53_09705 PF02527 rRNA small subunit methyltransferase G HRE53_09710 PF13640 2OG-Fe(II) oxygenase superfamily HRE53_09720 PF12894 Anaphase-promoting complex subunit 4 WD40 domain HRE53_09720 PF00400 WD domain, G-beta repeat HRE53_09725 PF03441 FAD binding domain of DNA photolyase HRE53_09725 PF00875 DNA photolyase HRE53_09740 PF00331 Glycosyl hydrolase family 10 HRE53_09740 PF02018 Carbohydrate binding domain HRE53_09740 PF00395 S-layer homology domain HRE53_09740 PF06452 Carbohydrate family 9 binding domain-like HRE53_09760 PF00004 ATPase family associated with various cellular activities (AAA) HRE53_09760 PF17862 AAA+ lid domain HRE53_09760 PF06480 FtsH Extracellular HRE53_09760 PF01434 Peptidase family M41 HRE53_09780 PF00012 Hsp70 protein HRE53_09790 PF00872 Transposase, Mutator family HRE53_09810 PF02698 DUF218 domain HRE53_09820 PF00223 Photosystem I psaA/psaB protein HRE53_09825 PF00223 Photosystem I psaA/psaB protein HRE53_09840 PF17191 RecG wedge domain HRE53_09840 PF00270 DEAD/DEAH box helicase HRE53_09840 PF00271 Helicase conserved C-terminal domain HRE53_09850 PF00107 Zinc-binding dehydrogenase HRE53_09850 PF08240 Alcohol dehydrogenase GroES-like domain HRE53_09855 PF01523 Putative modulator of DNA gyrase HRE53_09860 PF01523 Putative modulator of DNA gyrase HRE53_09865 PF00437 Type II/IV secretion system protein HRE53_09865 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain HRE53_09875 PF01386 Ribosomal L25p family HRE53_09875 PF14693 Ribosomal protein TL5, C-terminal domain HRE53_09880 PF13439 Glycosyltransferase Family 4 HRE53_09880 PF00534 Glycosyl transferases group 1 HRE53_09915 PF00873 AcrB/AcrD/AcrF family HRE53_09955 PF03881 Fructosamine kinase HRE53_09970 PF13439 Glycosyltransferase Family 4 HRE53_09970 PF00534 Glycosyl transferases group 1 HRE53_09975 PF02016 LD-carboxypeptidase N-terminal domain HRE53_09975 PF17676 LD-carboxypeptidase C-terminal domain HRE53_09990 PF00085 Thioredoxin HRE53_09995 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HRE53_09995 PF00361 Proton-conducting membrane transporter HRE53_09995 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus HRE53_10000 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus HRE53_10000 PF00361 Proton-conducting membrane transporter HRE53_10005 PF07728 AAA domain (dynein-related subfamily) HRE53_10010 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain HRE53_10010 PF06827 Zinc finger found in FPG and IleRS HRE53_10010 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain HRE53_10015 PF02427 Photosystem I reaction centre subunit IV / PsaE HRE53_10020 PF07689 KaiB domain HRE53_10020 PF00512 His Kinase A (phospho-acceptor) domain HRE53_10020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_10025 PF00400 WD domain, G-beta repeat HRE53_10065 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HRE53_10065 PF07733 Bacterial DNA polymerase III alpha NTPase domain HRE53_10065 PF14579 Helix-hairpin-helix motif HRE53_10065 PF02811 PHP domain HRE53_10065 PF01336 OB-fold nucleic acid binding domain HRE53_10070 PF13291 ACT domain HRE53_10070 PF04607 Region found in RelA / SpoT proteins HRE53_10070 PF02824 TGS domain HRE53_10075 PF00092 von Willebrand factor type A domain HRE53_10085 PF07714 Protein tyrosine kinase HRE53_10100 PF01694 Rhomboid family HRE53_10115 PF00483 Nucleotidyl transferase HRE53_10120 PF00717 Peptidase S24-like HRE53_10125 PF11799 impB/mucB/samB family C-terminal domain HRE53_10125 PF00817 impB/mucB/samB family HRE53_10125 PF11798 IMS family HHH motif HRE53_10125 PF13438 Domain of unknown function (DUF4113) HRE53_10150 PF00004 ATPase family associated with various cellular activities (AAA) HRE53_10150 PF17866 AAA lid domain HRE53_10160 PF01926 50S ribosome-binding GTPase HRE53_10170 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) HRE53_10175 PF01165 Ribosomal protein S21 HRE53_10180 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HRE53_10195 PF02569 Pantoate-beta-alanine ligase HRE53_10195 PF02224 Cytidylate kinase HRE53_10200 PF00155 Aminotransferase class I and II HRE53_10235 PF01788 PsbJ HRE53_10240 PF02419 PsbL protein HRE53_10245 PF00283 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits HRE53_10250 PF00283 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits HRE53_10250 PF00284 Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit HRE53_10255 PF14870 Photosynthesis system II assembly factor YCF48 HRE53_10260 PF00301 Rubredoxin HRE53_10265 PF08041 PetM family of cytochrome b6f complex subunit 7 HRE53_10270 PF01926 50S ribosome-binding GTPase HRE53_10270 PF06071 Protein of unknown function (DUF933) HRE53_10275 PF01276 Orn/Lys/Arg decarboxylase, major domain HRE53_10275 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain HRE53_10290 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HRE53_10295 PF12773 Double zinc ribbon HRE53_10295 PF00498 FHA domain HRE53_10300 PF03793 PASTA domain HRE53_10300 PF00069 Protein kinase domain HRE53_10320 PF00679 Elongation factor G C-terminus HRE53_10320 PF14492 Elongation Factor G, domain II HRE53_10320 PF03764 Elongation factor G, domain IV HRE53_10320 PF00009 Elongation factor Tu GTP binding domain HRE53_10320 PF03144 Elongation factor Tu domain 2 HRE53_10335 PF00999 Sodium/hydrogen exchanger family HRE53_10335 PF02254 TrkA-N domain HRE53_10340 PF01975 Survival protein SurE HRE53_10345 PF12706 Beta-lactamase superfamily domain HRE53_10345 PF00753 Metallo-beta-lactamase superfamily HRE53_10350 PF06574 FAD synthetase HRE53_10350 PF01687 Riboflavin kinase HRE53_10355 PF17863 AAA lid domain HRE53_10355 PF07726 ATPase family associated with various cellular activities (AAA) HRE53_10375 PF00266 Aminotransferase class-V HRE53_10400 PF03808 Glycosyl transferase WecB/TagA/CpsF family HRE53_10410 PF01464 Transglycosylase SLT domain HRE53_10410 PF10145 Phage-related minor tail protein HRE53_10410 PF01551 Peptidase family M23 HRE53_10420 PF00563 EAL domain HRE53_10420 PF00990 Diguanylate cyclase, GGDEF domain HRE53_10420 PF00498 FHA domain HRE53_10425 PF00111 2Fe-2S iron-sulfur cluster binding domain HRE53_10455 PF00830 Ribosomal L28 family HRE53_10465 PF07992 Pyridine nucleotide-disulphide oxidoreductase HRE53_10470 PF00578 AhpC/TSA family HRE53_10470 PF10417 C-terminal domain of 1-Cys peroxiredoxin HRE53_10475 PF00535 Glycosyl transferase family 2 HRE53_10490 PF01266 FAD dependent oxidoreductase HRE53_10490 PF16901 C-terminal domain of alpha-glycerophosphate oxidase HRE53_10515 PF16363 GDP-mannose 4,6 dehydratase HRE53_10525 PF00550 Phosphopantetheine attachment site HRE53_10555 PF13545 Crp-like helix-turn-helix domain HRE53_10560 PF00350 Dynamin family HRE53_10585 PF00156 Phosphoribosyl transferase domain HRE53_10585 PF13537 Glutamine amidotransferase domain HRE53_10590 PF00586 AIR synthase related protein, N-terminal domain HRE53_10590 PF02769 AIR synthase related protein, C-terminal domain HRE53_10590 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain HRE53_10605 PF17171 Glutathione S-transferase, C-terminal domain HRE53_10605 PF17172 Glutathione S-transferase N-terminal domain HRE53_10660 PF04542 Sigma-70 region 2 HRE53_10660 PF04545 Sigma-70, region 4 HRE53_10675 PF10502 Signal peptidase, peptidase S26 HRE53_10700 PF00872 Transposase, Mutator family HRE53_10720 PF01807 CHC2 zinc finger HRE53_10720 PF10410 DnaB-helicase binding domain of primase HRE53_10720 PF08275 DNA primase catalytic core, N-terminal domain HRE53_10725 PF00085 Thioredoxin HRE53_10730 PF16697 Inner membrane component of T3SS, cytoplasmic domain HRE53_10740 PF01502 Phosphoribosyl-AMP cyclohydrolase HRE53_10740 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase HRE53_10745 PF07690 Major Facilitator Superfamily HRE53_10755 PF00582 Universal stress protein family HRE53_10755 PF00999 Sodium/hydrogen exchanger family HRE53_10765 PF03358 NADPH-dependent FMN reductase HRE53_10780 PF10400 Virulence activator alpha C-term HRE53_10780 PF03551 Transcriptional regulator PadR-like family HRE53_10800 PF04480 Protein of unknown function (DUF559) HRE53_10815 PF12452 Protein of unknown function (DUF3685) HRE53_10815 PF00072 Response regulator receiver domain HRE53_10825 PF08719 Domain of unknown function (DUF1768) HRE53_10835 PF01906 Putative heavy-metal-binding HRE53_10865 PF13183 4Fe-4S dicluster domain HRE53_10865 PF02754 Cysteine-rich domain HRE53_10870 PF01565 FAD binding domain HRE53_10870 PF02913 FAD linked oxidases, C-terminal domain HRE53_10905 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HRE53_10915 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ HRE53_10945 PF02463 RecF/RecN/SMC N terminal domain HRE53_10960 PF01121 Dephospho-CoA kinase HRE53_10965 PF00403 Heavy-metal-associated domain HRE53_10980 PF00132 Bacterial transferase hexapeptide (six repeats) HRE53_10985 PF12697 Alpha/beta hydrolase family HRE53_11005 PF04955 HupE / UreJ protein HRE53_11010 PF02910 Fumarate reductase flavoprotein C-term HRE53_11010 PF00890 FAD binding domain HRE53_11015 PF08334 Type II secretion system (T2SS), protein G HRE53_11015 PF07963 Prokaryotic N-terminal methylation motif HRE53_11025 PF00440 Bacterial regulatory proteins, tetR family HRE53_11025 PF08359 YsiA-like protein, C-terminal region HRE53_11030 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system HRE53_11040 PF00561 alpha/beta hydrolase fold HRE53_11045 PF00232 Glycosyl hydrolase family 1 HRE53_11050 PF00069 Protein kinase domain HRE53_11070 PF00072 Response regulator receiver domain HRE53_11075 PF01928 CYTH domain HRE53_11085 PF00512 His Kinase A (phospho-acceptor) domain HRE53_11085 PF00672 HAMP domain HRE53_11085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_11085 PF18698 Histidine kinase sensor domain HRE53_11085 PF00989 PAS fold HRE53_11090 PF03653 Uncharacterised protein family (UPF0093) HRE53_11095 PF01625 Peptide methionine sulfoxide reductase HRE53_11105 PF06470 SMC proteins Flexible Hinge Domain HRE53_11105 PF02463 RecF/RecN/SMC N terminal domain HRE53_11115 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HRE53_11135 PF03480 Bacterial extracellular solute-binding protein, family 7 HRE53_11145 PF00703 Glycosyl hydrolases family 2 HRE53_11145 PF02836 Glycosyl hydrolases family 2, TIM barrel domain HRE53_11145 PF02837 Glycosyl hydrolases family 2, sugar binding domain HRE53_11150 PF00404 Dockerin type I domain HRE53_11150 PF00759 Glycosyl hydrolase family 9 HRE53_11150 PF02927 Cellulase N-terminal ig-like domain HRE53_11155 PF02594 Uncharacterised ACR, YggU family COG1872 HRE53_11170 PF00069 Protein kinase domain HRE53_11170 PF00805 Pentapeptide repeats (8 copies) HRE53_11180 PF13476 AAA domain HRE53_11200 PF00515 Tetratricopeptide repeat HRE53_11200 PF13176 Tetratricopeptide repeat HRE53_11225 PF00491 Arginase family HRE53_11230 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA HRE53_11235 PF02492 CobW/HypB/UreG, nucleotide-binding domain HRE53_11245 PF00528 Binding-protein-dependent transport system inner membrane component HRE53_11250 PF00005 ABC transporter HRE53_11260 PF03702 Anhydro-N-acetylmuramic acid kinase HRE53_11265 PF00069 Protein kinase domain HRE53_11280 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HRE53_11280 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HRE53_11305 PF04422 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term HRE53_11305 PF04432 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus HRE53_11310 PF00355 Rieske [2Fe-2S] domain HRE53_11330 PF01225 Mur ligase family, catalytic domain HRE53_11330 PF08245 Mur ligase middle domain HRE53_11330 PF02875 Mur ligase family, glutamate ligase domain HRE53_11335 PF01138 3' exoribonuclease family, domain 1 HRE53_11335 PF03725 3' exoribonuclease family, domain 2 HRE53_11340 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP HRE53_11345 PF00692 dUTPase HRE53_11350 PF13640 2OG-Fe(II) oxygenase superfamily HRE53_11355 PF02571 Precorrin-6x reductase CbiJ/CobK HRE53_11360 PF00990 Diguanylate cyclase, GGDEF domain HRE53_11360 PF00563 EAL domain HRE53_11360 PF00498 FHA domain HRE53_11365 PF01245 Ribosomal protein L19 HRE53_11375 PF00584 SecE/Sec61-gamma subunits of protein translocation complex HRE53_11380 PF00467 KOW motif HRE53_11380 PF02357 Transcription termination factor nusG HRE53_11385 PF00298 Ribosomal protein L11, RNA binding domain HRE53_11385 PF03946 Ribosomal protein L11, N-terminal domain HRE53_11390 PF00687 Ribosomal protein L1p/L10e family HRE53_11395 PF00466 Ribosomal protein L10 HRE53_11400 PF16320 Ribosomal protein L7/L12 dimerisation domain HRE53_11400 PF00542 Ribosomal protein L7/L12 C-terminal domain HRE53_11405 PF04472 Cell division protein SepF HRE53_11420 PF01061 ABC-2 type transporter HRE53_11420 PF00005 ABC transporter HRE53_11420 PF00498 FHA domain HRE53_11425 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain HRE53_11435 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain HRE53_11435 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain HRE53_11440 PF10128 Glucose-6-phosphate dehydrogenase subunit HRE53_11440 PF01471 Putative peptidoglycan binding domain HRE53_11450 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HRE53_11450 PF07685 CobB/CobQ-like glutamine amidotransferase domain HRE53_11460 PF07499 RuvA, C-terminal domain HRE53_11460 PF01330 RuvA N terminal domain HRE53_11470 PF07690 Major Facilitator Superfamily HRE53_11475 PF12697 Alpha/beta hydrolase family HRE53_11485 PF00124 Photosynthetic reaction centre protein HRE53_11500 PF05969 Photosystem II complex subunit Ycf12 HRE53_11525 PF08865 Domain of unknown function (DUF1830) HRE53_11540 PF01784 NIF3 (NGG1p interacting factor 3) HRE53_11550 PF00815 Histidinol dehydrogenase HRE53_11560 PF13302 Acetyltransferase (GNAT) domain HRE53_11580 PF02441 Flavoprotein HRE53_11590 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HRE53_11600 PF06418 CTP synthase N-terminus HRE53_11600 PF00117 Glutamine amidotransferase class-I HRE53_11605 PF00480 ROK family HRE53_11610 PF02542 YgbB family HRE53_11640 PF00571 CBS domain HRE53_11640 PF03471 Transporter associated domain HRE53_11640 PF01595 Cyclin M transmembrane N-terminal domain HRE53_11645 PF04839 Plastid and cyanobacterial ribosomal protein (PSRP-3 / Ycf65) HRE53_11650 PF00085 Thioredoxin HRE53_11705 PF02885 Glycosyl transferase family, helical bundle domain HRE53_11705 PF00591 Glycosyl transferase family, a/b domain HRE53_11730 PF01783 Ribosomal L32p protein family HRE53_11740 PF00578 AhpC/TSA family HRE53_11745 PF00175 Oxidoreductase NAD-binding domain HRE53_11765 PF00528 Binding-protein-dependent transport system inner membrane component HRE53_11770 PF00156 Phosphoribosyl transferase domain HRE53_11815 PF05685 Putative restriction endonuclease HRE53_11820 PF00583 Acetyltransferase (GNAT) family HRE53_11835 PF00069 Protein kinase domain HRE53_11835 PF00805 Pentapeptide repeats (8 copies) HRE53_11840 PF00528 Binding-protein-dependent transport system inner membrane component HRE53_11845 PF00528 Binding-protein-dependent transport system inner membrane component HRE53_11850 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HRE53_11850 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HRE53_11885 PF00005 ABC transporter HRE53_11895 PF01694 Rhomboid family HRE53_11920 PF00654 Voltage gated chloride channel HRE53_11930 PF13419 Haloacid dehalogenase-like hydrolase HRE53_11940 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system HRE53_11960 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HRE53_11960 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HRE53_11965 PF07690 Major Facilitator Superfamily HRE53_11970 PF00395 S-layer homology domain HRE53_11970 PF04966 Carbohydrate-selective porin, OprB family HRE53_11975 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HRE53_11975 PF01568 Molydopterin dinucleotide binding domain HRE53_11975 PF00384 Molybdopterin oxidoreductase HRE53_11980 PF02789 Cytosol aminopeptidase family, N-terminal domain HRE53_11980 PF00883 Cytosol aminopeptidase family, catalytic domain HRE53_11985 PF00881 Nitroreductase family HRE53_12005 PF00990 Diguanylate cyclase, GGDEF domain HRE53_12005 PF03707 Bacterial signalling protein N terminal repeat HRE53_12005 PF00563 EAL domain HRE53_12035 PF01964 Radical SAM ThiC family HRE53_12045 PF16198 tRNA pseudouridylate synthase B C-terminal domain HRE53_12045 PF01509 TruB family pseudouridylate synthase (N terminal domain) HRE53_12045 PF09157 Pseudouridine synthase II TruB, C-terminal HRE53_12085 PF02657 Fe-S metabolism associated domain HRE53_12090 PF02492 CobW/HypB/UreG, nucleotide-binding domain HRE53_12090 PF07683 Cobalamin synthesis protein cobW C-terminal domain HRE53_12100 PF01022 Bacterial regulatory protein, arsR family HRE53_12125 PF05114 Protein of unknown function (DUF692) HRE53_12155 PF02492 CobW/HypB/UreG, nucleotide-binding domain HRE53_12155 PF07683 Cobalamin synthesis protein cobW C-terminal domain HRE53_12180 PF01475 Ferric uptake regulator family HRE53_12190 PF07664 Ferrous iron transport protein B C terminus HRE53_12190 PF02421 Ferrous iron transport protein B HRE53_12190 PF07670 Nucleoside recognition HRE53_12210 PF13545 Crp-like helix-turn-helix domain HRE53_12220 PF00132 Bacterial transferase hexapeptide (six repeats) HRE53_12220 PF00101 Ribulose bisphosphate carboxylase, small chain HRE53_12225 PF01502 Phosphoribosyl-AMP cyclohydrolase HRE53_12235 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HRE53_12235 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HRE53_12235 PF03129 Anticodon binding domain HRE53_12240 PF01227 GTP cyclohydrolase I HRE53_12245 PF02492 CobW/HypB/UreG, nucleotide-binding domain HRE53_12245 PF07683 Cobalamin synthesis protein cobW C-terminal domain HRE53_12265 PF01381 Helix-turn-helix HRE53_12280 PF00872 Transposase, Mutator family HRE53_12295 PF07683 Cobalamin synthesis protein cobW C-terminal domain HRE53_12295 PF02492 CobW/HypB/UreG, nucleotide-binding domain HRE53_12300 PF00490 Delta-aminolevulinic acid dehydratase HRE53_12305 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment HRE53_12305 PF01297 Zinc-uptake complex component A periplasmic HRE53_12310 PF00005 ABC transporter HRE53_12315 PF00950 ABC 3 transport family HRE53_12325 PF00872 Transposase, Mutator family HRE53_12340 PF01297 Zinc-uptake complex component A periplasmic HRE53_12350 PF02086 D12 class N6 adenine-specific DNA methyltransferase HRE53_12360 PF02033 Ribosome-binding factor A HRE53_12365 PF01915 Glycosyl hydrolase family 3 C-terminal domain HRE53_12365 PF00933 Glycosyl hydrolase family 3 N terminal domain HRE53_12375 PF00205 Thiamine pyrophosphate enzyme, central domain HRE53_12375 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HRE53_12375 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HRE53_12385 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus HRE53_12385 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HRE53_12390 PF03099 Biotin/lipoate A/B protein ligase family HRE53_12395 PF02391 MoaE protein HRE53_12410 PF02096 60Kd inner membrane protein HRE53_12420 PF00825 Ribonuclease P HRE53_12425 PF00468 Ribosomal protein L34 HRE53_12430 PF11638 DnaA N-terminal domain HRE53_12430 PF00308 Bacterial dnaA protein HRE53_12430 PF08299 Bacterial dnaA protein helix-turn-helix HRE53_12435 PF00712 DNA polymerase III beta subunit, N-terminal domain HRE53_12435 PF02767 DNA polymerase III beta subunit, central domain HRE53_12435 PF02768 DNA polymerase III beta subunit, C-terminal domain HRE53_12450 PF00535 Glycosyl transferase family 2 HRE53_12455 PF00072 Response regulator receiver domain HRE53_12455 PF00486 Transcriptional regulatory protein, C terminal HRE53_12460 PF01451 Low molecular weight phosphotyrosine protein phosphatase HRE53_12465 PF03055 Retinal pigment epithelial membrane protein HRE53_12470 PF03092 BT1 family HRE53_12495 PF00106 short chain dehydrogenase HRE53_12515 PF00171 Aldehyde dehydrogenase family HRE53_12525 PF03989 DNA gyrase C-terminal domain, beta-propeller HRE53_12525 PF00521 DNA gyrase/topoisomerase IV, subunit A HRE53_12540 PF02350 UDP-N-acetylglucosamine 2-epimerase HRE53_12555 PF07689 KaiB domain HRE53_12565 PF07478 D-ala D-ala ligase C-terminus HRE53_12565 PF01820 D-ala D-ala ligase N-terminus HRE53_12575 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family HRE53_12605 PF00872 Transposase, Mutator family HRE53_12620 PF10502 Signal peptidase, peptidase S26 HRE53_12625 PF10502 Signal peptidase, peptidase S26 HRE53_12630 PF00920 Dehydratase family HRE53_12655 PF00931 NB-ARC domain HRE53_12655 PF00400 WD domain, G-beta repeat HRE53_12700 PF13545 Crp-like helix-turn-helix domain HRE53_12700 PF00027 Cyclic nucleotide-binding domain HRE53_12710 PF08501 Shikimate dehydrogenase substrate binding domain HRE53_12710 PF18317 Shikimate 5'-dehydrogenase C-terminal domain HRE53_12715 PF00543 Nitrogen regulatory protein P-II HRE53_12720 PF08402 TOBE domain HRE53_12720 PF00005 ABC transporter HRE53_12725 PF00069 Protein kinase domain HRE53_12725 PF00805 Pentapeptide repeats (8 copies) HRE53_12730 PF00436 Single-strand binding protein family HRE53_12735 PF01594 AI-2E family transporter HRE53_12740 PF02091 Glycyl-tRNA synthetase alpha subunit HRE53_12760 PF01475 Ferric uptake regulator family HRE53_12770 PF00483 Nucleotidyl transferase HRE53_12785 PF01521 Iron-sulphur cluster biosynthesis HRE53_12805 PF12697 Alpha/beta hydrolase family HRE53_12825 PF00639 PPIC-type PPIASE domain HRE53_12825 PF09312 SurA N-terminal domain HRE53_12830 PF00664 ABC transporter transmembrane region HRE53_12830 PF00005 ABC transporter HRE53_12830 PF03412 Peptidase C39 family HRE53_12855 PF13411 MerR HTH family regulatory protein HRE53_12855 PF06445 GyrI-like small molecule binding domain HRE53_12865 PF00211 Adenylate and Guanylate cyclase catalytic domain HRE53_12865 PF00072 Response regulator receiver domain HRE53_12870 PF00069 Protein kinase domain HRE53_12890 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) HRE53_12890 PF00722 Glycosyl hydrolases family 16 HRE53_12900 PF13439 Glycosyltransferase Family 4 HRE53_12900 PF00534 Glycosyl transferases group 1 HRE53_12905 PF01740 STAS domain HRE53_12905 PF00916 Sulfate permease family HRE53_12910 PF00999 Sodium/hydrogen exchanger family HRE53_12915 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HRE53_12980 PF00118 TCP-1/cpn60 chaperonin family HRE53_13000 PF13180 PDZ domain HRE53_13015 PF07992 Pyridine nucleotide-disulphide oxidoreductase HRE53_13040 PF00072 Response regulator receiver domain HRE53_13040 PF00486 Transcriptional regulatory protein, C terminal HRE53_13050 PF00762 Ferrochelatase HRE53_13055 PF00762 Ferrochelatase HRE53_13060 PF04542 Sigma-70 region 2 HRE53_13060 PF00140 Sigma-70 factor, region 1.2 HRE53_13060 PF04545 Sigma-70, region 4 HRE53_13060 PF04539 Sigma-70 region 3 HRE53_13070 PF00004 ATPase family associated with various cellular activities (AAA) HRE53_13070 PF17862 AAA+ lid domain HRE53_13070 PF06480 FtsH Extracellular HRE53_13070 PF01434 Peptidase family M41 HRE53_13075 PF06965 Na+/H+ antiporter 1 HRE53_13075 PF13462 Thioredoxin HRE53_13080 PF00872 Transposase, Mutator family HRE53_13090 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HRE53_13090 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HRE53_13125 PF03358 NADPH-dependent FMN reductase HRE53_13160 PF00563 EAL domain HRE53_13160 PF00990 Diguanylate cyclase, GGDEF domain HRE53_13160 PF03707 Bacterial signalling protein N terminal repeat HRE53_13190 PF00266 Aminotransferase class-V HRE53_13210 PF02661 Fic/DOC family HRE53_13210 PF13784 Fic/DOC family N-terminal HRE53_13235 PF01042 Endoribonuclease L-PSP HRE53_13245 PF01266 FAD dependent oxidoreductase HRE53_13245 PF05430 S-adenosyl-L-methionine-dependent methyltransferase HRE53_13255 PF02633 Creatinine amidohydrolase HRE53_13260 PF01494 FAD binding domain HRE53_13270 PF01566 Natural resistance-associated macrophage protein HRE53_13270 PF03358 NADPH-dependent FMN reductase HRE53_13275 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HRE53_13275 PF00205 Thiamine pyrophosphate enzyme, central domain HRE53_13275 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HRE53_13290 PF05762 VWA domain containing CoxE-like protein HRE53_13300 PF14251 Domain of unknown function (DUF4346) HRE53_13305 PF00391 PEP-utilising enzyme, mobile domain HRE53_13305 PF00224 Pyruvate kinase, barrel domain HRE53_13305 PF02887 Pyruvate kinase, alpha/beta domain HRE53_13310 PF02082 Transcriptional regulator HRE53_13355 PF03186 CobD/Cbib protein HRE53_13360 PF06725 3D domain HRE53_13360 PF03562 MltA specific insert domain HRE53_13370 PF00990 Diguanylate cyclase, GGDEF domain HRE53_13370 PF00563 EAL domain HRE53_13370 PF08448 PAS fold HRE53_13375 PF13419 Haloacid dehalogenase-like hydrolase HRE53_13385 PF02686 Glu-tRNAGln amidotransferase C subunit HRE53_13390 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit HRE53_13410 PF08240 Alcohol dehydrogenase GroES-like domain HRE53_13410 PF00107 Zinc-binding dehydrogenase HRE53_13410 PF13823 Alcohol dehydrogenase GroES-associated HRE53_13425 PF00440 Bacterial regulatory proteins, tetR family HRE53_13425 PF16925 Tetracyclin repressor-like, C-terminal domain HRE53_13430 PF00107 Zinc-binding dehydrogenase HRE53_13430 PF13823 Alcohol dehydrogenase GroES-associated HRE53_13430 PF08240 Alcohol dehydrogenase GroES-like domain HRE53_13435 PF08240 Alcohol dehydrogenase GroES-like domain HRE53_13435 PF00107 Zinc-binding dehydrogenase HRE53_13440 PF02525 Flavodoxin-like fold HRE53_13450 PF00106 short chain dehydrogenase HRE53_13460 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HRE53_13485 PF02798 Glutathione S-transferase, N-terminal domain HRE53_13490 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HRE53_13495 PF08240 Alcohol dehydrogenase GroES-like domain HRE53_13495 PF00107 Zinc-binding dehydrogenase HRE53_13505 PF00106 short chain dehydrogenase HRE53_13510 PF08240 Alcohol dehydrogenase GroES-like domain HRE53_13510 PF00107 Zinc-binding dehydrogenase HRE53_13520 PF00069 Protein kinase domain HRE53_13525 PF01497 Periplasmic binding protein HRE53_13545 PF02609 Exonuclease VII small subunit HRE53_13550 PF02601 Exonuclease VII, large subunit HRE53_13550 PF13742 OB-fold nucleic acid binding domain HRE53_13555 PF00912 Transglycosylase HRE53_13555 PF00905 Penicillin binding protein transpeptidase domain HRE53_13560 PF00579 tRNA synthetases class I (W and Y) HRE53_13560 PF01479 S4 domain HRE53_13600 PF13683 Integrase core domain HRE53_13600 PF01610 Transposase HRE53_13605 PF01497 Periplasmic binding protein HRE53_13615 PF01596 O-methyltransferase HRE53_13620 PF07690 Major Facilitator Superfamily HRE53_13625 PF00005 ABC transporter HRE53_13630 PF01032 FecCD transport family HRE53_13645 PF07992 Pyridine nucleotide-disulphide oxidoreductase HRE53_13660 PF01497 Periplasmic binding protein HRE53_13665 PF07715 TonB-dependent Receptor Plug Domain HRE53_13665 PF00593 TonB dependent receptor HRE53_13680 PF00421 Photosystem II protein HRE53_13685 PF00421 Photosystem II protein HRE53_13695 PF00127 Copper binding proteins, plastocyanin/azurin family HRE53_13705 PF00274 Fructose-bisphosphate aldolase class-I HRE53_13720 PF13640 2OG-Fe(II) oxygenase superfamily HRE53_13720 PF18331 PKHD-type hydroxylase C-terminal domain HRE53_13765 PF13358 DDE superfamily endonuclease HRE53_13770 PF12852 Cupin HRE53_13770 PF12833 Helix-turn-helix domain HRE53_13775 PF07715 TonB-dependent Receptor Plug Domain HRE53_13775 PF00593 TonB dependent receptor HRE53_13785 PF01596 O-methyltransferase HRE53_13805 PF01497 Periplasmic binding protein HRE53_13840 PF00210 Ferritin-like domain HRE53_13845 PF02472 Biopolymer transport protein ExbD/TolR HRE53_13850 PF01618 MotA/TolQ/ExbB proton channel family HRE53_13865 PF01032 FecCD transport family HRE53_13870 PF00005 ABC transporter HRE53_13875 PF01497 Periplasmic binding protein HRE53_13890 PF13545 Crp-like helix-turn-helix domain HRE53_13910 PF00107 Zinc-binding dehydrogenase HRE53_13910 PF08240 Alcohol dehydrogenase GroES-like domain HRE53_13925 PF00889 Elongation factor TS HRE53_13930 PF00318 Ribosomal protein S2 HRE53_13935 PF04452 RNA methyltransferase HRE53_13955 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HRE53_13955 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HRE53_13955 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HRE53_13955 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HRE53_13965 PF16360 GTP-binding GTPase Middle Region HRE53_13965 PF13167 GTP-binding GTPase N-terminal HRE53_13965 PF01926 50S ribosome-binding GTPase HRE53_13995 PF00753 Metallo-beta-lactamase superfamily HRE53_13995 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain HRE53_13995 PF17770 Ribonuclease J C-terminal domain HRE53_14000 PF00701 Dihydrodipicolinate synthetase family HRE53_14005 PF01118 Semialdehyde dehydrogenase, NAD binding domain HRE53_14005 PF02774 Semialdehyde dehydrogenase, dimerisation domain HRE53_14010 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HRE53_14010 PF05697 Bacterial trigger factor protein (TF) HRE53_14010 PF05698 Bacterial trigger factor protein (TF) C-terminus HRE53_14015 PF00574 Clp protease HRE53_14020 PF10431 C-terminal, D2-small domain, of ClpB protein HRE53_14020 PF06689 ClpX C4-type zinc finger HRE53_14020 PF07724 AAA domain (Cdc48 subfamily) HRE53_14025 PF00561 alpha/beta hydrolase fold HRE53_14040 PF08448 PAS fold HRE53_14040 PF00990 Diguanylate cyclase, GGDEF domain HRE53_14040 PF00563 EAL domain HRE53_14055 PF00583 Acetyltransferase (GNAT) family HRE53_14060 PF00128 Alpha amylase, catalytic domain HRE53_14080 PF00484 Carbonic anhydrase HRE53_14090 PF00474 Sodium:solute symporter family HRE53_14095 PF00474 Sodium:solute symporter family HRE53_14115 PF01627 Hpt domain HRE53_14115 PF00486 Transcriptional regulatory protein, C terminal HRE53_14115 PF00072 Response regulator receiver domain HRE53_14120 PF01627 Hpt domain HRE53_14120 PF00072 Response regulator receiver domain HRE53_14120 PF00486 Transcriptional regulatory protein, C terminal HRE53_14125 PF00989 PAS fold HRE53_14125 PF00512 His Kinase A (phospho-acceptor) domain HRE53_14125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_14125 PF00672 HAMP domain HRE53_14130 PF00486 Transcriptional regulatory protein, C terminal HRE53_14130 PF00072 Response regulator receiver domain HRE53_14160 PF00005 ABC transporter HRE53_14170 PF00528 Binding-protein-dependent transport system inner membrane component HRE53_14175 PF12849 PBP superfamily domain HRE53_14180 PF01022 Bacterial regulatory protein, arsR family HRE53_14210 PF00872 Transposase, Mutator family HRE53_14215 PF01638 HxlR-like helix-turn-helix HRE53_14220 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HRE53_14255 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HRE53_14260 PF00230 Major intrinsic protein HRE53_14270 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HRE53_14280 PF09335 SNARE associated Golgi protein HRE53_14285 PF00698 Acyl transferase domain HRE53_14290 PF01553 Acyltransferase HRE53_14290 PF00501 AMP-binding enzyme HRE53_14290 PF13193 AMP-binding enzyme C-terminal domain HRE53_14300 PF01327 Polypeptide deformylase HRE53_14305 PF02397 Bacterial sugar transferase HRE53_14330 PF17284 Spermidine synthase tetramerisation domain HRE53_14335 PF00491 Arginase family HRE53_14345 PF01425 Amidase HRE53_14355 PF00909 Ammonium Transporter Family HRE53_14440 PF00154 recA bacterial DNA recombination protein HRE53_14445 PF09423 PhoD-like phosphatase HRE53_14445 PF16655 PhoD-like phosphatase, N-terminal domain HRE53_14465 PF00106 short chain dehydrogenase HRE53_14500 PF00067 Cytochrome P450 HRE53_14505 PF00305 Lipoxygenase HRE53_14510 PF00069 Protein kinase domain HRE53_14510 PF03793 PASTA domain HRE53_14515 PF00072 Response regulator receiver domain HRE53_14515 PF00158 Sigma-54 interaction domain HRE53_14515 PF02954 Bacterial regulatory protein, Fis family HRE53_14520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_14520 PF00497 Bacterial extracellular solute-binding proteins, family 3 HRE53_14520 PF00512 His Kinase A (phospho-acceptor) domain HRE53_14535 PF01170 Putative RNA methylase family UPF0020 HRE53_14535 PF02926 THUMP domain HRE53_14550 PF01592 NifU-like N terminal domain HRE53_14555 PF10726 Protein of function (DUF2518) HRE53_14560 PF00465 Iron-containing alcohol dehydrogenase HRE53_14565 PF00155 Aminotransferase class I and II HRE53_14570 PF02386 Cation transport protein HRE53_14575 PF02254 TrkA-N domain HRE53_14575 PF02080 TrkA-C domain HRE53_14580 PF01926 50S ribosome-binding GTPase HRE53_14580 PF07650 KH domain HRE53_14595 PF00300 Histidine phosphatase superfamily (branch 1) HRE53_14625 PF00815 Histidinol dehydrogenase HRE53_14630 PF01649 Ribosomal protein S20 HRE53_14635 PF01026 TatD related DNase HRE53_14640 PF04561 RNA polymerase Rpb2, domain 2 HRE53_14640 PF10385 RNA polymerase beta subunit external 1 domain HRE53_14640 PF00562 RNA polymerase Rpb2, domain 6 HRE53_14640 PF04560 RNA polymerase Rpb2, domain 7 HRE53_14640 PF04563 RNA polymerase beta subunit HRE53_14640 PF04565 RNA polymerase Rpb2, domain 3 HRE53_14645 PF04997 RNA polymerase Rpb1, domain 1 HRE53_14645 PF04983 RNA polymerase Rpb1, domain 3 HRE53_14645 PF00623 RNA polymerase Rpb1, domain 2 HRE53_14650 PF04998 RNA polymerase Rpb1, domain 5 HRE53_14650 PF05000 RNA polymerase Rpb1, domain 4 HRE53_14650 PF04983 RNA polymerase Rpb1, domain 3 HRE53_14660 PF01554 MatE HRE53_14675 PF05690 Thiazole biosynthesis protein ThiG HRE53_14680 PF04542 Sigma-70 region 2 HRE53_14680 PF08281 Sigma-70, region 4 HRE53_14690 PF01040 UbiA prenyltransferase family HRE53_14735 PF00534 Glycosyl transferases group 1 HRE53_14735 PF13439 Glycosyltransferase Family 4 HRE53_14740 PF16363 GDP-mannose 4,6 dehydratase HRE53_14745 PF01209 ubiE/COQ5 methyltransferase family HRE53_14750 PF14602 Hexapeptide repeat of succinyl-transferase HRE53_14750 PF12464 Maltose acetyltransferase HRE53_14750 PF00132 Bacterial transferase hexapeptide (six repeats) HRE53_14775 PF00550 Phosphopantetheine attachment site HRE53_14810 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HRE53_14815 PF00132 Bacterial transferase hexapeptide (six repeats) HRE53_14820 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HRE53_14820 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HRE53_14825 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HRE53_14825 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HRE53_14825 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HRE53_14830 PF02719 Polysaccharide biosynthesis protein HRE53_14850 PF01016 Ribosomal L27 protein HRE53_14855 PF00829 Ribosomal prokaryotic L21 protein HRE53_14895 PF08502 LeuA allosteric (dimerisation) domain HRE53_14895 PF00682 HMGL-like HRE53_14910 PF01063 Amino-transferase class IV HRE53_14920 PF00128 Alpha amylase, catalytic domain HRE53_14935 PF01252 Signal peptidase (SPase) II HRE53_14940 PF02632 BioY family HRE53_14945 PF00421 Photosystem II protein HRE53_14950 PF00421 Photosystem II protein HRE53_14955 PF04029 2-phosphosulpholactate phosphatase HRE53_14960 PF01207 Dihydrouridine synthase (Dus) HRE53_14975 PF04069 Substrate binding domain of ABC-type glycine betaine transport system HRE53_14990 PF02570 Precorrin-8X methylmutase HRE53_14995 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HRE53_15005 PF13085 2Fe-2S iron-sulfur cluster binding domain HRE53_15015 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HRE53_15015 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HRE53_15030 PF00459 Inositol monophosphatase family HRE53_15040 PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus HRE53_15050 PF00106 short chain dehydrogenase HRE53_15065 PF01475 Ferric uptake regulator family HRE53_15075 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HRE53_15075 PF07992 Pyridine nucleotide-disulphide oxidoreductase HRE53_15085 PF01593 Flavin containing amine oxidoreductase HRE53_15115 PF01872 RibD C-terminal domain HRE53_15115 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HRE53_15125 PF02533 Photosystem II 4 kDa reaction centre component HRE53_15130 PF01702 Queuine tRNA-ribosyltransferase HRE53_15140 PF03773 Predicted permease HRE53_15150 PF00072 Response regulator receiver domain HRE53_15150 PF01627 Hpt domain HRE53_15150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_15150 PF00512 His Kinase A (phospho-acceptor) domain HRE53_15150 PF00672 HAMP domain HRE53_15160 PF00196 Bacterial regulatory proteins, luxR family HRE53_15160 PF00072 Response regulator receiver domain HRE53_15175 PF03471 Transporter associated domain HRE53_15175 PF00999 Sodium/hydrogen exchanger family HRE53_15175 PF02080 TrkA-C domain HRE53_15190 PF05378 Hydantoinase/oxoprolinase N-terminal region HRE53_15190 PF01968 Hydantoinase/oxoprolinase HRE53_15205 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain HRE53_15205 PF12706 Beta-lactamase superfamily domain HRE53_15215 PF13419 Haloacid dehalogenase-like hydrolase HRE53_15240 PF00931 NB-ARC domain HRE53_15240 PF00400 WD domain, G-beta repeat HRE53_15255 PF00149 Calcineurin-like phosphoesterase HRE53_15275 PF18331 PKHD-type hydroxylase C-terminal domain HRE53_15275 PF13640 2OG-Fe(II) oxygenase superfamily HRE53_15295 PF00563 EAL domain HRE53_15295 PF01590 GAF domain HRE53_15295 PF00990 Diguanylate cyclase, GGDEF domain HRE53_15295 PF00360 Phytochrome region HRE53_15315 PF00141 Peroxidase HRE53_15340 PF00248 Aldo/keto reductase family HRE53_15355 PF12833 Helix-turn-helix domain HRE53_15360 PF00582 Universal stress protein family HRE53_15390 PF09383 NIL domain HRE53_15390 PF00005 ABC transporter HRE53_15395 PF00498 FHA domain HRE53_15395 PF00005 ABC transporter HRE53_15395 PF01061 ABC-2 type transporter HRE53_15400 PF00069 Protein kinase domain HRE53_15410 PF00072 Response regulator receiver domain HRE53_15410 PF00486 Transcriptional regulatory protein, C terminal HRE53_15425 PF03741 Integral membrane protein TerC family HRE53_15450 PF00334 Nucleoside diphosphate kinase HRE53_15455 PF01569 PAP2 superfamily HRE53_15465 PF00872 Transposase, Mutator family HRE53_15475 PF03781 Sulfatase-modifying factor enzyme 1 HRE53_15480 PF03781 Sulfatase-modifying factor enzyme 1 HRE53_15485 PF00072 Response regulator receiver domain HRE53_15485 PF01627 Hpt domain HRE53_15485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_15485 PF02895 Signal transducing histidine kinase, homodimeric domain HRE53_15485 PF01584 CheW-like domain HRE53_15490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HRE53_15490 PF01590 GAF domain HRE53_15500 PF00072 Response regulator receiver domain HRE53_15500 PF00486 Transcriptional regulatory protein, C terminal HRE53_15505 PF00072 Response regulator receiver domain HRE53_15505 PF14332 Domain of unknown function (DUF4388) HRE53_15515 PF00672 HAMP domain HRE53_15515 PF00072 Response regulator receiver domain HRE53_15515 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HRE53_15515 PF01627 Hpt domain HRE53_15515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_15515 PF00512 His Kinase A (phospho-acceptor) domain HRE53_15520 PF01653 NAD-dependent DNA ligase adenylation domain HRE53_15520 PF03120 NAD-dependent DNA ligase OB-fold domain HRE53_15520 PF03119 NAD-dependent DNA ligase C4 zinc finger domain HRE53_15520 PF12826 Helix-hairpin-helix motif HRE53_15520 PF00533 BRCA1 C Terminus (BRCT) domain HRE53_15530 PF02557 D-alanyl-D-alanine carboxypeptidase HRE53_15535 PF00069 Protein kinase domain HRE53_15540 PF13378 Enolase C-terminal domain-like HRE53_15545 PF13193 AMP-binding enzyme C-terminal domain HRE53_15545 PF00501 AMP-binding enzyme HRE53_15575 PF00487 Fatty acid desaturase HRE53_15630 PF00132 Bacterial transferase hexapeptide (six repeats) HRE53_15635 PF06298 Photosystem II protein Y (PsbY) HRE53_15660 PF04055 Radical SAM superfamily HRE53_15700 PF01029 NusB family HRE53_15705 PF00448 SRP54-type protein, GTPase domain HRE53_15705 PF02881 SRP54-type protein, helical bundle domain HRE53_15710 PF07228 Stage II sporulation protein E (SpoIIE) HRE53_15710 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain HRE53_15720 PF00557 Metallopeptidase family M24 HRE53_15720 PF05195 Aminopeptidase P, N-terminal domain HRE53_15765 PF01433 Peptidase family M1 domain HRE53_15765 PF11838 ERAP1-like C-terminal domain HRE53_15780 PF02532 Photosystem II reaction centre I protein (PSII 4.8 kDa protein) HRE53_15790 PF01894 Uncharacterised protein family UPF0047 HRE53_15810 PF08460 Bacterial SH3 domain HRE53_15810 PF01551 Peptidase family M23 HRE53_15820 PF01063 Amino-transferase class IV HRE53_15830 PF02683 Cytochrome C biogenesis protein transmembrane region HRE53_15830 PF17991 Thioredoxin like C-terminal domain HRE53_15830 PF00578 AhpC/TSA family HRE53_15835 PF00480 ROK family HRE53_15855 PF00144 Beta-lactamase HRE53_15865 PF00994 Probable molybdopterin binding domain HRE53_15875 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system HRE53_15880 PF01209 ubiE/COQ5 methyltransferase family HRE53_15895 PF00270 DEAD/DEAH box helicase HRE53_15895 PF00271 Helicase conserved C-terminal domain HRE53_15895 PF08494 DEAD/H associated HRE53_15900 PF00360 Phytochrome region HRE53_15900 PF08446 PAS fold HRE53_15900 PF00512 His Kinase A (phospho-acceptor) domain HRE53_15900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_15900 PF01590 GAF domain HRE53_15905 PF00360 Phytochrome region HRE53_15905 PF08446 PAS fold HRE53_15905 PF00512 His Kinase A (phospho-acceptor) domain HRE53_15905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_15905 PF01590 GAF domain HRE53_15910 PF00072 Response regulator receiver domain HRE53_15910 PF00486 Transcriptional regulatory protein, C terminal HRE53_15920 PF00226 DnaJ domain HRE53_15920 PF01556 DnaJ C terminal domain HRE53_15920 PF00684 DnaJ central domain HRE53_15940 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HRE53_15940 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HRE53_15950 PF01039 Carboxyl transferase domain HRE53_15950 PF17848 Acetyl-coA carboxylase zinc finger domain HRE53_15960 PF14495 Cytochrome c-550 domain HRE53_15965 PF14495 Cytochrome c-550 domain HRE53_15970 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HRE53_15995 PF02005 N2,N2-dimethylguanosine tRNA methyltransferase HRE53_16005 PF02617 ATP-dependent Clp protease adaptor protein ClpS HRE53_16040 PF00305 Lipoxygenase HRE53_16045 PF00390 Malic enzyme, N-terminal domain HRE53_16045 PF03949 Malic enzyme, NAD binding domain HRE53_16065 PF08264 Anticodon-binding domain of tRNA HRE53_16065 PF00133 tRNA synthetases class I (I, L, M and V) HRE53_16065 PF06827 Zinc finger found in FPG and IleRS HRE53_16070 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system HRE53_16075 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system HRE53_16110 PF00069 Protein kinase domain HRE53_16110 PF00805 Pentapeptide repeats (8 copies) HRE53_16125 PF00486 Transcriptional regulatory protein, C terminal HRE53_16125 PF00072 Response regulator receiver domain HRE53_16130 PF02132 RecR protein HRE53_16130 PF13662 Toprim domain HRE53_16135 PF00730 HhH-GPD superfamily base excision DNA repair protein HRE53_16135 PF14815 NUDIX domain HRE53_16150 PF00140 Sigma-70 factor, region 1.2 HRE53_16150 PF04542 Sigma-70 region 2 HRE53_16150 PF04545 Sigma-70, region 4 HRE53_16150 PF04539 Sigma-70 region 3 HRE53_16155 PF01648 4'-phosphopantetheinyl transferase superfamily HRE53_16160 PF00258 Flavodoxin HRE53_16160 PF01613 Flavin reductase like domain HRE53_16185 PF00364 Biotin-requiring enzyme HRE53_16190 PF09285 Elongation factor P, C-terminal HRE53_16190 PF08207 Elongation factor P (EF-P) KOW-like domain HRE53_16190 PF01132 Elongation factor P (EF-P) OB domain HRE53_16195 PF00563 EAL domain HRE53_16195 PF00990 Diguanylate cyclase, GGDEF domain HRE53_16195 PF03707 Bacterial signalling protein N terminal repeat HRE53_16205 PF06055 Exopolysaccharide synthesis, ExoD HRE53_16210 PF05221 S-adenosyl-L-homocysteine hydrolase HRE53_16210 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain HRE53_16225 PF00294 pfkB family carbohydrate kinase HRE53_16230 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain HRE53_16230 PF03900 Porphobilinogen deaminase, C-terminal domain HRE53_16240 PF16363 GDP-mannose 4,6 dehydratase HRE53_16245 PF00365 Phosphofructokinase HRE53_16250 PF01726 LexA DNA binding domain HRE53_16250 PF00717 Peptidase S24-like HRE53_16260 PF00400 WD domain, G-beta repeat HRE53_16260 PF00931 NB-ARC domain HRE53_16265 PF00069 Protein kinase domain HRE53_16275 PF02021 Uncharacterised protein family UPF0102 HRE53_16285 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HRE53_16290 PF00111 2Fe-2S iron-sulfur cluster binding domain HRE53_16325 PF01479 S4 domain HRE53_16325 PF00163 Ribosomal protein S4/S9 N-terminal domain HRE53_16335 PF06514 Photosystem II 12 kDa extrinsic protein (PsbU) HRE53_16340 PF00672 HAMP domain HRE53_16340 PF00211 Adenylate and Guanylate cyclase catalytic domain HRE53_16345 PF01370 NAD dependent epimerase/dehydratase family HRE53_16390 PF00113 Enolase, C-terminal TIM barrel domain HRE53_16390 PF03952 Enolase, N-terminal domain HRE53_16395 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HRE53_16400 PF04966 Carbohydrate-selective porin, OprB family HRE53_16400 PF00395 S-layer homology domain HRE53_16405 PF04055 Radical SAM superfamily HRE53_16410 PF00163 Ribosomal protein S4/S9 N-terminal domain HRE53_16410 PF01479 S4 domain HRE53_16415 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase HRE53_16430 PF00111 2Fe-2S iron-sulfur cluster binding domain HRE53_16435 PF00459 Inositol monophosphatase family HRE53_16440 PF00226 DnaJ domain HRE53_16440 PF01556 DnaJ C terminal domain HRE53_16440 PF00684 DnaJ central domain HRE53_16445 PF13393 Histidyl-tRNA synthetase HRE53_16450 PF01634 ATP phosphoribosyltransferase HRE53_16475 PF00155 Aminotransferase class I and II HRE53_16480 PF04012 PspA/IM30 family HRE53_16490 PF00248 Aldo/keto reductase family HRE53_16495 PF00285 Citrate synthase, C-terminal domain HRE53_16585 PF02567 Phenazine biosynthesis-like protein HRE53_16590 PF03466 LysR substrate binding domain HRE53_16590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRE53_16595 PF08240 Alcohol dehydrogenase GroES-like domain HRE53_16595 PF00107 Zinc-binding dehydrogenase HRE53_16630 PF00005 ABC transporter HRE53_16645 PF02943 Ferredoxin thioredoxin reductase catalytic beta chain HRE53_16650 PF01494 FAD binding domain HRE53_16660 PF00069 Protein kinase domain HRE53_16680 PF11266 Long-chain fatty aldehyde decarbonylase HRE53_16685 PF01488 Shikimate / quinate 5-dehydrogenase HRE53_16720 PF01124 MAPEG family HRE53_16730 PF00072 Response regulator receiver domain HRE53_16730 PF00486 Transcriptional regulatory protein, C terminal HRE53_16735 PF00270 DEAD/DEAH box helicase HRE53_16735 PF08148 DSHCT (NUC185) domain HRE53_16735 PF00271 Helicase conserved C-terminal domain HRE53_16740 PF02895 Signal transducing histidine kinase, homodimeric domain HRE53_16740 PF07194 P2 response regulator binding domain HRE53_16740 PF01627 Hpt domain HRE53_16740 PF01584 CheW-like domain HRE53_16740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_16745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HRE53_16745 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term HRE53_16755 PF00072 Response regulator receiver domain HRE53_16765 PF03167 Uracil DNA glycosylase superfamily HRE53_16780 PF13180 PDZ domain HRE53_16780 PF02163 Peptidase family M50 HRE53_16785 PF00633 Helix-hairpin-helix motif HRE53_16785 PF00730 HhH-GPD superfamily base excision DNA repair protein HRE53_16790 PF00253 Ribosomal protein S14p/S29e HRE53_16805 PF01467 Cytidylyltransferase-like HRE53_16810 PF01406 tRNA synthetases class I (C) catalytic domain HRE53_16810 PF09190 DALR domain HRE53_16820 PF00498 FHA domain HRE53_16820 PF00563 EAL domain HRE53_16820 PF00990 Diguanylate cyclase, GGDEF domain HRE53_16830 PF13180 PDZ domain HRE53_16835 PF12002 MgsA AAA+ ATPase C terminal HRE53_16835 PF00004 ATPase family associated with various cellular activities (AAA) HRE53_16835 PF16193 AAA C-terminal domain HRE53_16850 PF00124 Photosynthetic reaction centre protein HRE53_16860 PF03601 Conserved hypothetical protein 698 HRE53_16870 PF01507 Phosphoadenosine phosphosulfate reductase family HRE53_16885 PF00950 ABC 3 transport family HRE53_16890 PF00005 ABC transporter HRE53_16895 PF00886 Ribosomal protein S16 HRE53_16905 PF02562 PhoH-like protein HRE53_16910 PF08241 Methyltransferase domain HRE53_16920 PF01351 Ribonuclease HII HRE53_16930 PF00696 Amino acid kinase family HRE53_16950 PF13460 NAD(P)H-binding HRE53_16965 PF16921 Tex protein YqgF-like domain HRE53_16965 PF09371 Tex-like protein N-terminal domain HRE53_16965 PF00575 S1 RNA binding domain HRE53_16965 PF17674 HHH domain HRE53_16980 PF00872 Transposase, Mutator family HRE53_17005 PF00872 Transposase, Mutator family HRE53_17025 PF13090 Polyphosphate kinase C-terminal domain 2 HRE53_17025 PF02503 Polyphosphate kinase middle domain HRE53_17025 PF17941 Polyphosphate kinase C-terminal domain 1 HRE53_17025 PF13089 Polyphosphate kinase N-terminal domain HRE53_17030 PF11987 Translation-initiation factor 2 HRE53_17030 PF04760 Translation initiation factor IF-2, N-terminal region HRE53_17030 PF00009 Elongation factor Tu GTP binding domain HRE53_17055 PF01551 Peptidase family M23 HRE53_17055 PF08460 Bacterial SH3 domain HRE53_17085 PF00583 Acetyltransferase (GNAT) family HRE53_17090 PF03737 Aldolase/RraA HRE53_17115 PF00892 EamA-like transporter family HRE53_17130 PF17757 UvrB interaction domain HRE53_17130 PF00271 Helicase conserved C-terminal domain HRE53_17130 PF00270 DEAD/DEAH box helicase HRE53_17130 PF02559 CarD-like/TRCF domain HRE53_17130 PF03461 TRCF domain HRE53_17145 PF00132 Bacterial transferase hexapeptide (six repeats) HRE53_17145 PF03479 Plants and Prokaryotes Conserved (PCC) domain HRE53_17145 PF12804 MobA-like NTP transferase domain HRE53_17150 PF00413 Matrixin HRE53_17180 PF03466 LysR substrate binding domain HRE53_17180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRE53_17200 PF00400 WD domain, G-beta repeat HRE53_17200 PF12894 Anaphase-promoting complex subunit 4 WD40 domain HRE53_17235 PF00067 Cytochrome P450 HRE53_17240 PF00892 EamA-like transporter family HRE53_17275 PF00892 EamA-like transporter family HRE53_17290 PF03167 Uracil DNA glycosylase superfamily HRE53_17315 PF00400 WD domain, G-beta repeat HRE53_17345 PF05491 RuvB C-terminal winged helix domain HRE53_17345 PF05496 Holliday junction DNA helicase RuvB P-loop domain HRE53_17345 PF17864 RuvB AAA lid domain HRE53_17350 PF01139 tRNA-splicing ligase RtcB HRE53_17360 PF04542 Sigma-70 region 2 HRE53_17360 PF04539 Sigma-70 region 3 HRE53_17360 PF04545 Sigma-70, region 4 HRE53_17365 PF01027 Inhibitor of apoptosis-promoting Bax1 HRE53_17375 PF01545 Cation efflux family HRE53_17375 PF16916 Dimerisation domain of Zinc Transporter HRE53_17380 PF02222 ATP-grasp domain HRE53_17380 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain HRE53_17390 PF17862 AAA+ lid domain HRE53_17390 PF00004 ATPase family associated with various cellular activities (AAA) HRE53_17390 PF06480 FtsH Extracellular HRE53_17390 PF01434 Peptidase family M41 HRE53_17430 PF00266 Aminotransferase class-V HRE53_17445 PF00563 EAL domain HRE53_17445 PF03707 Bacterial signalling protein N terminal repeat HRE53_17445 PF00990 Diguanylate cyclase, GGDEF domain HRE53_17470 PF02938 GAD domain HRE53_17470 PF00152 tRNA synthetases class II (D, K and N) HRE53_17470 PF01336 OB-fold nucleic acid binding domain HRE53_17485 PF00814 Glycoprotease family HRE53_17490 PF02416 mttA/Hcf106 family HRE53_17495 PF13326 Photosystem II Pbs27 HRE53_17500 PF01888 CbiD HRE53_17505 PF00958 GMP synthase C terminal domain HRE53_17505 PF00117 Glutamine amidotransferase class-I HRE53_17515 PF00512 His Kinase A (phospho-acceptor) domain HRE53_17515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_17515 PF00989 PAS fold HRE53_17520 PF02514 CobN/Magnesium Chelatase HRE53_17545 PF01554 MatE HRE53_17555 PF02272 DHHA1 domain HRE53_17555 PF01411 tRNA synthetases class II (A) HRE53_17555 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HRE53_17560 PF01641 SelR domain HRE53_17570 PF00005 ABC transporter HRE53_17570 PF00664 ABC transporter transmembrane region HRE53_17580 PF01333 Apocytochrome F, C-terminal HRE53_17580 PF16639 Apocytochrome F, N-terminal HRE53_17585 PF00355 Rieske [2Fe-2S] domain HRE53_17595 PF00902 Sec-independent protein translocase protein (TatC) HRE53_17600 PF07681 DoxX HRE53_17620 PF13180 PDZ domain HRE53_17630 PF03572 Peptidase family S41 HRE53_17630 PF00595 PDZ domain HRE53_17640 PF03788 LrgA family HRE53_17645 PF00291 Pyridoxal-phosphate dependent enzyme HRE53_17645 PF00585 C-terminal regulatory domain of Threonine dehydratase HRE53_17690 PF03625 Domain of unknown function DUF302 HRE53_17690 PF02537 CrcB-like protein, Camphor Resistance (CrcB) HRE53_17720 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HRE53_17750 PF00072 Response regulator receiver domain HRE53_17750 PF00486 Transcriptional regulatory protein, C terminal HRE53_17755 PF00400 WD domain, G-beta repeat HRE53_17760 PF00805 Pentapeptide repeats (8 copies) HRE53_17790 PF13302 Acetyltransferase (GNAT) domain HRE53_17790 PF00958 GMP synthase C terminal domain HRE53_17790 PF03352 Methyladenine glycosylase HRE53_17790 PF00117 Glutamine amidotransferase class-I HRE53_17790 PF13673 Acetyltransferase (GNAT) domain HRE53_17835 PF00330 Aconitase family (aconitate hydratase) HRE53_17875 PF01842 ACT domain HRE53_17875 PF00551 Formyl transferase HRE53_17890 PF03170 Bacterial cellulose synthase subunit HRE53_17890 PF00535 Glycosyl transferase family 2 HRE53_17890 PF07238 PilZ domain HRE53_17895 PF00293 NUDIX domain HRE53_17905 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HRE53_17940 PF00528 Binding-protein-dependent transport system inner membrane component HRE53_17950 PF14698 Argininosuccinate lyase C-terminal HRE53_17950 PF00206 Lyase HRE53_17960 PF00156 Phosphoribosyl transferase domain HRE53_17965 PF00166 Chaperonin 10 Kd subunit HRE53_17970 PF00118 TCP-1/cpn60 chaperonin family HRE53_17995 PF00175 Oxidoreductase NAD-binding domain HRE53_17995 PF00042 Globin HRE53_17995 PF00970 Oxidoreductase FAD-binding domain HRE53_18005 PF05140 ResB-like family HRE53_18005 PF01578 Cytochrome C assembly protein HRE53_18050 PF01464 Transglycosylase SLT domain HRE53_18050 PF10145 Phage-related minor tail protein HRE53_18050 PF01551 Peptidase family M23 HRE53_18055 PF00664 ABC transporter transmembrane region HRE53_18055 PF00005 ABC transporter HRE53_18065 PF00121 Triosephosphate isomerase HRE53_18070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRE53_18070 PF03466 LysR substrate binding domain HRE53_18075 PF02885 Glycosyl transferase family, helical bundle domain HRE53_18075 PF00591 Glycosyl transferase family, a/b domain HRE53_18080 PF12804 MobA-like NTP transferase domain HRE53_18100 PF13520 Amino acid permease HRE53_18110 PF01522 Polysaccharide deacetylase HRE53_18115 PF00580 UvrD/REP helicase N-terminal domain HRE53_18115 PF13361 UvrD-like helicase C-terminal domain HRE53_18125 PF01070 FMN-dependent dehydrogenase HRE53_18135 PF08865 Domain of unknown function (DUF1830) HRE53_18145 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HRE53_18145 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HRE53_18150 PF04002 RadC-like JAB domain HRE53_18155 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HRE53_18160 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HRE53_18170 PF00004 ATPase family associated with various cellular activities (AAA) HRE53_18170 PF17862 AAA+ lid domain HRE53_18170 PF06480 FtsH Extracellular HRE53_18170 PF01434 Peptidase family M41 HRE53_18175 PF01740 STAS domain HRE53_18180 PF02163 Peptidase family M50 HRE53_18180 PF00571 CBS domain HRE53_18185 PF07992 Pyridine nucleotide-disulphide oxidoreductase HRE53_18185 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HRE53_18190 PF00218 Indole-3-glycerol phosphate synthase HRE53_18195 PF17275 Family of unknown function (DUF5340) HRE53_18210 PF00849 RNA pseudouridylate synthase HRE53_18210 PF01479 S4 domain HRE53_18220 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase HRE53_18220 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase HRE53_18225 PF13180 PDZ domain HRE53_18230 PF14489 QueF-like protein HRE53_18235 PF00731 AIR carboxylase HRE53_18240 PF04228 Putative neutral zinc metallopeptidase HRE53_18245 PF02233 NAD(P) transhydrogenase beta subunit HRE53_18250 PF05222 Alanine dehydrogenase/PNT, N-terminal domain HRE53_18250 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HRE53_18250 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch HRE53_18255 PF00805 Pentapeptide repeats (8 copies) HRE53_18260 PF01872 RibD C-terminal domain HRE53_18280 PF03055 Retinal pigment epithelial membrane protein HRE53_18305 PF05222 Alanine dehydrogenase/PNT, N-terminal domain HRE53_18305 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HRE53_18315 PF05175 Methyltransferase small domain HRE53_18340 PF01926 50S ribosome-binding GTPase HRE53_18340 PF12631 MnmE helical domain HRE53_18340 PF10396 GTP-binding protein TrmE N-terminus HRE53_18350 PF13191 AAA ATPase domain HRE53_18350 PF00069 Protein kinase domain HRE53_18355 PF00069 Protein kinase domain HRE53_18365 PF00069 Protein kinase domain HRE53_18365 PF08239 Bacterial SH3 domain HRE53_18370 PF00069 Protein kinase domain HRE53_18375 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain HRE53_18375 PF01588 Putative tRNA binding domain HRE53_18375 PF03483 B3/4 domain HRE53_18375 PF03484 tRNA synthetase B5 domain HRE53_18375 PF03147 Ferredoxin-fold anticodon binding domain HRE53_18380 PF00990 Diguanylate cyclase, GGDEF domain HRE53_18380 PF00360 Phytochrome region HRE53_18380 PF01590 GAF domain HRE53_18380 PF00563 EAL domain HRE53_18415 PF00905 Penicillin binding protein transpeptidase domain HRE53_18450 PF04011 LemA family HRE53_18460 PF00360 Phytochrome region HRE53_18460 PF08446 PAS fold HRE53_18460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_18460 PF01590 GAF domain HRE53_18460 PF00512 His Kinase A (phospho-acceptor) domain HRE53_18465 PF00072 Response regulator receiver domain HRE53_18470 PF00990 Diguanylate cyclase, GGDEF domain HRE53_18470 PF05231 MASE1 HRE53_18470 PF08447 PAS fold HRE53_18470 PF08448 PAS fold HRE53_18470 PF13426 PAS domain HRE53_18470 PF00563 EAL domain HRE53_18475 PF02954 Bacterial regulatory protein, Fis family HRE53_18475 PF00072 Response regulator receiver domain HRE53_18475 PF00158 Sigma-54 interaction domain HRE53_18485 PF00188 Cysteine-rich secretory protein family HRE53_18490 PF12450 von Willebrand factor HRE53_18490 PF12034 Domain of unknown function (DUF3520) HRE53_18490 PF00092 von Willebrand factor type A domain HRE53_18495 PF01022 Bacterial regulatory protein, arsR family HRE53_18500 PF13369 Transglutaminase-like superfamily HRE53_18505 PF00989 PAS fold HRE53_18505 PF00512 His Kinase A (phospho-acceptor) domain HRE53_18505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_18505 PF00672 HAMP domain HRE53_18510 PF09367 CpeS-like protein HRE53_18515 PF08206 Ribonuclease B OB domain HRE53_18515 PF00773 RNB domain HRE53_18515 PF17876 Cold shock domain HRE53_18515 PF00575 S1 RNA binding domain HRE53_18540 PF00535 Glycosyl transferase family 2 HRE53_18590 PF00764 Arginosuccinate synthase HRE53_18615 PF02660 Glycerol-3-phosphate acyltransferase HRE53_18625 PF07685 CobB/CobQ-like glutamine amidotransferase domain HRE53_18635 PF03819 MazG nucleotide pyrophosphohydrolase domain HRE53_18660 PF12399 Branched-chain amino acid ATP-binding cassette transporter HRE53_18660 PF00005 ABC transporter HRE53_18665 PF11862 Domain of unknown function (DUF3382) HRE53_18665 PF02653 Branched-chain amino acid transport system / permease component HRE53_18685 PF10990 Protein of unknown function (DUF2809) HRE53_18690 PF03883 Peroxide stress protein YaaA HRE53_18695 PF01209 ubiE/COQ5 methyltransferase family HRE53_18720 PF17862 AAA+ lid domain HRE53_18720 PF01434 Peptidase family M41 HRE53_18720 PF06480 FtsH Extracellular HRE53_18720 PF00004 ATPase family associated with various cellular activities (AAA) HRE53_18745 PF00664 ABC transporter transmembrane region HRE53_18745 PF00005 ABC transporter HRE53_18750 PF00486 Transcriptional regulatory protein, C terminal HRE53_18750 PF00072 Response regulator receiver domain HRE53_18785 PF05690 Thiazole biosynthesis protein ThiG HRE53_18785 PF01266 FAD dependent oxidoreductase HRE53_18790 PF01300 Telomere recombination HRE53_18790 PF03481 Putative GTP-binding controlling metal-binding HRE53_18800 PF13443 Cro/C1-type HTH DNA-binding domain HRE53_18805 PF00145 C-5 cytosine-specific DNA methylase HRE53_18840 PF08281 Sigma-70, region 4 HRE53_18840 PF04542 Sigma-70 region 2 HRE53_18845 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HRE53_18855 PF00581 Rhodanese-like domain HRE53_18860 PF00196 Bacterial regulatory proteins, luxR family HRE53_18860 PF13426 PAS domain HRE53_18910 PF00069 Protein kinase domain HRE53_18910 PF03793 PASTA domain HRE53_18915 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain HRE53_18915 PF00877 NlpC/P60 family HRE53_18920 PF01176 Translation initiation factor 1A / IF-1 HRE53_18930 PF00344 SecY translocase HRE53_18935 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A HRE53_18940 PF03719 Ribosomal protein S5, C-terminal domain HRE53_18940 PF00333 Ribosomal protein S5, N-terminal domain HRE53_18945 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast HRE53_18950 PF00347 Ribosomal protein L6 HRE53_18955 PF00410 Ribosomal protein S8 HRE53_18960 PF00281 Ribosomal protein L5 HRE53_18960 PF00673 ribosomal L5P family C-terminus HRE53_18965 PF00467 KOW motif HRE53_18965 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 HRE53_18970 PF00238 Ribosomal protein L14p/L23e HRE53_18975 PF00366 Ribosomal protein S17 HRE53_18980 PF00831 Ribosomal L29 protein HRE53_18985 PF00252 Ribosomal protein L16p/L10e HRE53_18990 PF00189 Ribosomal protein S3, C-terminal domain HRE53_18990 PF07650 KH domain HRE53_18995 PF00237 Ribosomal protein L22p/L17e HRE53_19000 PF00203 Ribosomal protein S19 HRE53_19005 PF03947 Ribosomal Proteins L2, C-terminal domain HRE53_19005 PF00181 Ribosomal Proteins L2, RNA binding domain HRE53_19010 PF00276 Ribosomal protein L23 HRE53_19015 PF00573 Ribosomal protein L4/L1 family HRE53_19020 PF00297 Ribosomal protein L3 HRE53_19030 PF01547 Bacterial extracellular solute-binding protein HRE53_19040 PF12557 Cob(I)alamin adenosyltransferase N terminal HRE53_19040 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP HRE53_19085 PF01209 ubiE/COQ5 methyltransferase family HRE53_19095 PF00696 Amino acid kinase family HRE53_19095 PF01472 PUA domain HRE53_19120 PF01725 Ham1 family HRE53_19125 PF00075 RNase H HRE53_19135 PF01966 HD domain HRE53_19140 PF00595 PDZ domain HRE53_19140 PF03572 Peptidase family S41 HRE53_19145 PF00033 Cytochrome b/b6/petB HRE53_19150 PF00032 Cytochrome b(C-terminal)/b6/petD HRE53_19155 PF01327 Polypeptide deformylase HRE53_19160 PF17782 DprA winged helix domain HRE53_19160 PF02481 DNA recombination-mediator protein A HRE53_19165 PF00919 Uncharacterized protein family UPF0004 HRE53_19165 PF01938 TRAM domain HRE53_19165 PF04055 Radical SAM superfamily HRE53_19170 PF00487 Fatty acid desaturase HRE53_19175 PF01202 Shikimate kinase HRE53_19190 PF08281 Sigma-70, region 4 HRE53_19190 PF04542 Sigma-70 region 2 HRE53_19200 PF02602 Uroporphyrinogen-III synthase HemD HRE53_19210 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HRE53_19225 PF04101 Glycosyltransferase family 28 C-terminal domain HRE53_19225 PF03033 Glycosyltransferase family 28 N-terminal domain HRE53_19235 PF03775 Septum formation inhibitor MinC, C-terminal domain HRE53_19240 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HRE53_19245 PF03776 Septum formation topological specificity factor MinE HRE53_19250 PF01933 Uncharacterised protein family UPF0052 HRE53_19255 PF09210 Domain of unknown function (DUF1957) HRE53_19255 PF03065 Glycosyl hydrolase family 57 HRE53_19280 PF13439 Glycosyltransferase Family 4 HRE53_19280 PF00534 Glycosyl transferases group 1 HRE53_19290 PF11967 Recombination protein O N terminal HRE53_19290 PF02565 Recombination protein O C terminal HRE53_19295 PF01791 DeoC/LacD family aldolase HRE53_19305 PF00175 Oxidoreductase NAD-binding domain HRE53_19305 PF01383 CpcD/allophycocyanin linker domain HRE53_19335 PF00005 ABC transporter HRE53_19340 PF01040 UbiA prenyltransferase family HRE53_19345 PF02628 Cytochrome oxidase assembly protein HRE53_19350 PF00116 Cytochrome C oxidase subunit II, periplasmic domain HRE53_19350 PF02790 Cytochrome C oxidase subunit II, transmembrane domain HRE53_19355 PF00115 Cytochrome C and Quinol oxidase polypeptide I HRE53_19360 PF00510 Cytochrome c oxidase subunit III HRE53_19365 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain HRE53_19365 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain HRE53_19370 PF03466 LysR substrate binding domain HRE53_19370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRE53_19380 PF01636 Phosphotransferase enzyme family HRE53_19395 PF00400 WD domain, G-beta repeat HRE53_19415 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family HRE53_19425 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HRE53_19450 PF00248 Aldo/keto reductase family HRE53_19465 PF01243 Pyridoxamine 5'-phosphate oxidase HRE53_19465 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region HRE53_19485 PF12849 PBP superfamily domain HRE53_19495 PF01434 Peptidase family M41 HRE53_19495 PF06480 FtsH Extracellular HRE53_19495 PF17862 AAA+ lid domain HRE53_19495 PF00004 ATPase family associated with various cellular activities (AAA) HRE53_19515 PF04539 Sigma-70 region 3 HRE53_19515 PF04545 Sigma-70, region 4 HRE53_19515 PF04542 Sigma-70 region 2 HRE53_19515 PF00140 Sigma-70 factor, region 1.2 HRE53_19520 PF00762 Ferrochelatase HRE53_19530 PF00762 Ferrochelatase HRE53_19535 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HRE53_19540 PF01790 Prolipoprotein diacylglyceryl transferase HRE53_19550 PF07085 DRTGG domain HRE53_19560 PF13186 Iron-sulfur cluster-binding domain HRE53_19560 PF04055 Radical SAM superfamily HRE53_19570 PF01812 5-formyltetrahydrofolate cyclo-ligase family HRE53_19580 PF02580 D-Tyr-tRNA(Tyr) deacylase HRE53_19585 PF01380 SIS domain HRE53_19590 PF00575 S1 RNA binding domain HRE53_19600 PF00360 Phytochrome region HRE53_19600 PF00990 Diguanylate cyclase, GGDEF domain HRE53_19600 PF01590 GAF domain HRE53_19600 PF00563 EAL domain HRE53_19605 PF07726 ATPase family associated with various cellular activities (AAA) HRE53_19605 PF17863 AAA lid domain HRE53_19610 PF17863 AAA lid domain HRE53_19610 PF07726 ATPase family associated with various cellular activities (AAA) HRE53_19625 PF01740 STAS domain HRE53_19635 PF04025 Domain of unknown function (DUF370) HRE53_19640 PF00625 Guanylate kinase HRE53_19650 PF10417 C-terminal domain of 1-Cys peroxiredoxin HRE53_19650 PF00578 AhpC/TSA family HRE53_19660 PF00543 Nitrogen regulatory protein P-II HRE53_19665 PF01425 Amidase HRE53_19675 PF11780 Protein of unknown function (DUF3318) HRE53_19680 PF00773 RNB domain HRE53_19685 PF01084 Ribosomal protein S18 HRE53_19690 PF00471 Ribosomal protein L33 HRE53_19730 PF03091 CutA1 divalent ion tolerance protein HRE53_19735 PF00664 ABC transporter transmembrane region HRE53_19735 PF00005 ABC transporter HRE53_19755 PF08241 Methyltransferase domain HRE53_19760 PF00534 Glycosyl transferases group 1 HRE53_19760 PF13477 Glycosyl transferase 4-like HRE53_19780 PF00534 Glycosyl transferases group 1 HRE53_19795 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HRE53_19805 PF01022 Bacterial regulatory protein, arsR family HRE53_19810 PF00085 Thioredoxin HRE53_19815 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HRE53_19830 PF13407 Periplasmic binding protein domain HRE53_19835 PF13243 Squalene-hopene cyclase C-terminal domain HRE53_19835 PF13249 Squalene-hopene cyclase N-terminal domain HRE53_19860 PF03572 Peptidase family S41 HRE53_19860 PF00595 PDZ domain HRE53_19865 PF01925 Sulfite exporter TauE/SafE HRE53_19875 PF02681 Divergent PAP2 family HRE53_19880 PF00348 Polyprenyl synthetase HRE53_19885 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HRE53_19885 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HRE53_19910 PF00675 Insulinase (Peptidase family M16) HRE53_19910 PF05193 Peptidase M16 inactive domain HRE53_19915 PF00675 Insulinase (Peptidase family M16) HRE53_19915 PF05193 Peptidase M16 inactive domain HRE53_19920 PF00288 GHMP kinases N terminal domain HRE53_19920 PF08544 GHMP kinases C terminal HRE53_19925 PF13614 AAA domain HRE53_19950 PF12804 MobA-like NTP transferase domain HRE53_19950 PF14602 Hexapeptide repeat of succinyl-transferase HRE53_19950 PF00132 Bacterial transferase hexapeptide (six repeats) HRE53_19960 PF01131 DNA topoisomerase HRE53_19960 PF01751 Toprim domain HRE53_19960 PF01396 Topoisomerase DNA binding C4 zinc finger HRE53_19980 PF01757 Acyltransferase family HRE53_19985 PF13737 Transposase DDE domain HRE53_19990 PF00291 Pyridoxal-phosphate dependent enzyme HRE53_20000 PF00490 Delta-aminolevulinic acid dehydratase HRE53_20025 PF13847 Methyltransferase domain HRE53_20055 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HRE53_20110 PF00072 Response regulator receiver domain HRE53_20115 PF00563 EAL domain HRE53_20115 PF00498 FHA domain HRE53_20115 PF00990 Diguanylate cyclase, GGDEF domain HRE53_20120 PF00750 tRNA synthetases class I (R) HRE53_20120 PF05746 DALR anticodon binding domain HRE53_20120 PF03485 Arginyl tRNA synthetase N terminal domain HRE53_20130 PF03742 PetN HRE53_20135 PF08241 Methyltransferase domain HRE53_20140 PF01040 UbiA prenyltransferase family HRE53_20145 PF00805 Pentapeptide repeats (8 copies) HRE53_20145 PF00069 Protein kinase domain HRE53_20160 PF03816 Cell envelope-related transcriptional attenuator domain HRE53_20170 PF00483 Nucleotidyl transferase HRE53_20175 PF00107 Zinc-binding dehydrogenase HRE53_20175 PF08240 Alcohol dehydrogenase GroES-like domain HRE53_20180 PF00293 NUDIX domain HRE53_20185 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HRE53_20190 PF04166 Pyridoxal phosphate biosynthetic protein PdxA HRE53_20195 PF00575 S1 RNA binding domain HRE53_20200 PF03477 ATP cone domain HRE53_20225 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HRE53_20225 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HRE53_20225 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HRE53_20225 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HRE53_20230 PF14306 PUA-like domain HRE53_20230 PF01747 ATP-sulfurylase HRE53_20250 PF13847 Methyltransferase domain HRE53_20250 PF01938 TRAM domain HRE53_20265 PF00072 Response regulator receiver domain HRE53_20265 PF00486 Transcriptional regulatory protein, C terminal HRE53_20270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_20270 PF00989 PAS fold HRE53_20270 PF00512 His Kinase A (phospho-acceptor) domain HRE53_20280 PF00378 Enoyl-CoA hydratase/isomerase HRE53_20290 PF02075 Crossover junction endodeoxyribonuclease RuvC HRE53_20295 PF00679 Elongation factor G C-terminus HRE53_20295 PF00009 Elongation factor Tu GTP binding domain HRE53_20295 PF06421 GTP-binding protein LepA C-terminus HRE53_20295 PF03144 Elongation factor Tu domain 2 HRE53_20305 PF01435 Peptidase family M48 HRE53_20340 PF00474 Sodium:solute symporter family HRE53_20345 PF12697 Alpha/beta hydrolase family HRE53_20410 PF12146 Serine aminopeptidase, S33 HRE53_20435 PF17191 RecG wedge domain HRE53_20435 PF00271 Helicase conserved C-terminal domain HRE53_20435 PF00270 DEAD/DEAH box helicase HRE53_20445 PF00692 dUTPase HRE53_20450 PF01381 Helix-turn-helix HRE53_20455 PF05973 Phage derived protein Gp49-like (DUF891) HRE53_20470 PF03435 Saccharopine dehydrogenase NADP binding domain HRE53_20500 PF01610 Transposase HRE53_20500 PF13683 Integrase core domain HRE53_20515 PF00563 EAL domain HRE53_20515 PF00990 Diguanylate cyclase, GGDEF domain HRE53_20515 PF03707 Bacterial signalling protein N terminal repeat HRE53_20530 PF00069 Protein kinase domain HRE53_20530 PF00805 Pentapeptide repeats (8 copies) HRE53_20545 PF00156 Phosphoribosyl transferase domain HRE53_20560 PF00210 Ferritin-like domain HRE53_20570 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HRE53_20570 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HRE53_20580 PF01740 STAS domain HRE53_20585 PF00636 Ribonuclease III domain HRE53_20590 PF00588 SpoU rRNA Methylase family HRE53_20590 PF08032 RNA 2'-O ribose methyltransferase substrate binding HRE53_20600 PF00561 alpha/beta hydrolase fold HRE53_20605 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain HRE53_20605 PF00117 Glutamine amidotransferase class-I HRE53_20610 PF12773 Double zinc ribbon HRE53_20610 PF00498 FHA domain HRE53_20620 PF00528 Binding-protein-dependent transport system inner membrane component HRE53_20640 PF02780 Transketolase, C-terminal domain HRE53_20640 PF02779 Transketolase, pyrimidine binding domain HRE53_20640 PF13292 1-deoxy-D-xylulose-5-phosphate synthase HRE53_20645 PF01008 Initiation factor 2 subunit family HRE53_20650 PF00149 Calcineurin-like phosphoesterase HRE53_20660 PF00069 Protein kinase domain HRE53_20675 PF00132 Bacterial transferase hexapeptide (six repeats) HRE53_20685 PF00535 Glycosyl transferase family 2 HRE53_20695 PF00512 His Kinase A (phospho-acceptor) domain HRE53_20695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_20700 PF00072 Response regulator receiver domain HRE53_20700 PF00486 Transcriptional regulatory protein, C terminal HRE53_20710 PF00528 Binding-protein-dependent transport system inner membrane component HRE53_20715 PF00005 ABC transporter HRE53_20720 PF02560 Cyanate lyase C-terminal domain HRE53_20725 PF10397 Adenylosuccinate lyase C-terminus HRE53_20725 PF00206 Lyase HRE53_20770 PF00067 Cytochrome P450 HRE53_20775 PF13188 PAS domain HRE53_20775 PF00990 Diguanylate cyclase, GGDEF domain HRE53_20775 PF00563 EAL domain HRE53_20775 PF03707 Bacterial signalling protein N terminal repeat HRE53_20790 PF00270 DEAD/DEAH box helicase HRE53_20790 PF00271 Helicase conserved C-terminal domain HRE53_20790 PF16124 RecQ zinc-binding HRE53_20795 PF13180 PDZ domain HRE53_20810 PF02531 PsaD HRE53_20815 PF04715 Anthranilate synthase component I, N terminal region HRE53_20815 PF00425 chorismate binding enzyme HRE53_20820 PF00111 2Fe-2S iron-sulfur cluster binding domain HRE53_20845 PF01300 Telomere recombination HRE53_20850 PF01969 Protein of unknown function DUF111 HRE53_20855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_20855 PF00512 His Kinase A (phospho-acceptor) domain HRE53_20855 PF01627 Hpt domain HRE53_20855 PF00072 Response regulator receiver domain HRE53_20880 PF00749 tRNA synthetases class I (E and Q), catalytic domain HRE53_20900 PF01609 Transposase DDE domain HRE53_20900 PF13808 DDE_Tnp_1-associated HRE53_20925 PF00931 NB-ARC domain HRE53_20925 PF00400 WD domain, G-beta repeat HRE53_20930 PF13649 Methyltransferase domain HRE53_20945 PF02397 Bacterial sugar transferase HRE53_20950 PF00805 Pentapeptide repeats (8 copies) HRE53_20950 PF00069 Protein kinase domain HRE53_20955 PF03781 Sulfatase-modifying factor enzyme 1 HRE53_20965 PF04542 Sigma-70 region 2 HRE53_20965 PF04545 Sigma-70, region 4 HRE53_20965 PF04539 Sigma-70 region 3 HRE53_20965 PF00140 Sigma-70 factor, region 1.2 HRE53_20965 PF03979 Sigma-70 factor, region 1.1 HRE53_20970 PF00154 recA bacterial DNA recombination protein HRE53_20985 PF00817 impB/mucB/samB family HRE53_20985 PF11799 impB/mucB/samB family C-terminal domain HRE53_21045 PF01385 Probable transposase HRE53_21045 PF12323 Helix-turn-helix domain HRE53_21045 PF07282 Putative transposase DNA-binding domain HRE53_21080 PF02401 LytB protein HRE53_21090 PF00072 Response regulator receiver domain HRE53_21090 PF00196 Bacterial regulatory proteins, luxR family HRE53_21105 PF00563 EAL domain HRE53_21105 PF03707 Bacterial signalling protein N terminal repeat HRE53_21105 PF00990 Diguanylate cyclase, GGDEF domain HRE53_21140 PF00421 Photosystem II protein HRE53_21155 PF09335 SNARE associated Golgi protein HRE53_21170 PF01479 S4 domain HRE53_21170 PF01728 FtsJ-like methyltransferase HRE53_21185 PF02661 Fic/DOC family HRE53_21210 PF00582 Universal stress protein family HRE53_21215 PF02525 Flavodoxin-like fold HRE53_21225 PF01434 Peptidase family M41 HRE53_21225 PF00004 ATPase family associated with various cellular activities (AAA) HRE53_21225 PF06480 FtsH Extracellular HRE53_21225 PF17862 AAA+ lid domain HRE53_21235 PF02152 Dihydroneopterin aldolase HRE53_21240 PF00149 Calcineurin-like phosphoesterase HRE53_21245 PF00485 Phosphoribulokinase / Uridine kinase family HRE53_21255 PF07992 Pyridine nucleotide-disulphide oxidoreductase HRE53_21260 PF00348 Polyprenyl synthetase HRE53_21265 PF10502 Signal peptidase, peptidase S26 HRE53_21270 PF01078 Magnesium chelatase, subunit ChlI HRE53_21270 PF17863 AAA lid domain HRE53_21280 PF03061 Thioesterase superfamily HRE53_21290 PF01618 MotA/TolQ/ExbB proton channel family HRE53_21295 PF02472 Biopolymer transport protein ExbD/TolR HRE53_21310 PF02540 NAD synthase HRE53_21310 PF00795 Carbon-nitrogen hydrolase HRE53_21320 PF01467 Cytidylyltransferase-like HRE53_21325 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family HRE53_21325 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain HRE53_21335 PF01722 BolA-like protein HRE53_21340 PF00462 Glutaredoxin HRE53_21350 PF11264 Thylakoid formation protein HRE53_21355 PF04015 Domain of unknown function (DUF362) HRE53_21360 PF02581 Thiamine monophosphate synthase HRE53_21375 PF00027 Cyclic nucleotide-binding domain HRE53_21375 PF13545 Crp-like helix-turn-helix domain HRE53_21415 PF00595 PDZ domain HRE53_21415 PF03572 Peptidase family S41 HRE53_21425 PF01430 Hsp33 protein HRE53_21455 PF00360 Phytochrome region HRE53_21455 PF00990 Diguanylate cyclase, GGDEF domain HRE53_21455 PF00563 EAL domain HRE53_21455 PF01590 GAF domain HRE53_21465 PF00990 Diguanylate cyclase, GGDEF domain HRE53_21465 PF08448 PAS fold HRE53_21465 PF00563 EAL domain HRE53_21470 PF04389 Peptidase family M28 HRE53_21480 PF04539 Sigma-70 region 3 HRE53_21480 PF04542 Sigma-70 region 2 HRE53_21480 PF04545 Sigma-70, region 4 HRE53_21490 PF13808 DDE_Tnp_1-associated HRE53_21490 PF01609 Transposase DDE domain HRE53_21555 PF00069 Protein kinase domain HRE53_21590 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HRE53_21590 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HRE53_21605 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB HRE53_21605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_21605 PF00512 His Kinase A (phospho-acceptor) domain HRE53_21605 PF08448 PAS fold HRE53_21605 PF00672 HAMP domain HRE53_21655 PF08712 Scaffold protein Nfu/NifU N terminal HRE53_21655 PF13769 Virulence factor HRE53_21670 PF04472 Cell division protein SepF HRE53_21690 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HRE53_21690 PF00056 lactate/malate dehydrogenase, NAD binding domain HRE53_21715 PF00154 recA bacterial DNA recombination protein HRE53_21735 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain HRE53_21735 PF14490 Helix-hairpin-helix containing domain HRE53_21735 PF13538 UvrD-like helicase C-terminal domain HRE53_21745 PF06514 Photosystem II 12 kDa extrinsic protein (PsbU) HRE53_21750 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HRE53_21755 PF00571 CBS domain HRE53_21755 PF02163 Peptidase family M50 HRE53_21810 PF03631 Virulence factor BrkB HRE53_21820 PF05532 CsbD-like HRE53_21830 PF00072 Response regulator receiver domain HRE53_21835 PF06724 Domain of Unknown Function (DUF1206) HRE53_21850 PF07043 Protein of unknown function (DUF1328) HRE53_21855 PF05532 CsbD-like HRE53_21865 PF00210 Ferritin-like domain HRE53_21890 PF13808 DDE_Tnp_1-associated HRE53_21890 PF01609 Transposase DDE domain HRE53_21905 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region HRE53_21905 PF01243 Pyridoxamine 5'-phosphate oxidase HRE53_21910 PF01554 MatE HRE53_21925 PF02163 Peptidase family M50 HRE53_21925 PF00571 CBS domain HRE53_21935 PF00582 Universal stress protein family HRE53_21960 PF01679 Proteolipid membrane potential modulator HRE53_21970 PF01590 GAF domain HRE53_21970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_21970 PF08446 PAS fold HRE53_21970 PF00360 Phytochrome region HRE53_21975 PF00196 Bacterial regulatory proteins, luxR family HRE53_21975 PF00072 Response regulator receiver domain HRE53_21995 PF00072 Response regulator receiver domain HRE53_22000 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HRE53_22000 PF00672 HAMP domain HRE53_22000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_22000 PF00512 His Kinase A (phospho-acceptor) domain HRE53_22000 PF01627 Hpt domain HRE53_22000 PF00072 Response regulator receiver domain HRE53_22005 PF09456 RcsC Alpha-Beta-Loop (ABL) HRE53_22005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_22005 PF00512 His Kinase A (phospho-acceptor) domain HRE53_22005 PF00072 Response regulator receiver domain HRE53_22015 PF00924 Mechanosensitive ion channel HRE53_22040 PF01370 NAD dependent epimerase/dehydratase family HRE53_22040 PF08338 Domain of unknown function (DUF1731) HRE53_22050 PF01209 ubiE/COQ5 methyltransferase family HRE53_22065 PF09335 SNARE associated Golgi protein HRE53_22080 PF05368 NmrA-like family HRE53_22090 PF00563 EAL domain HRE53_22090 PF00990 Diguanylate cyclase, GGDEF domain HRE53_22090 PF03707 Bacterial signalling protein N terminal repeat HRE53_22100 PF00291 Pyridoxal-phosphate dependent enzyme HRE53_22100 PF00571 CBS domain HRE53_22120 PF03588 Leucyl/phenylalanyl-tRNA protein transferase HRE53_22125 PF00512 His Kinase A (phospho-acceptor) domain HRE53_22125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_22125 PF00497 Bacterial extracellular solute-binding proteins, family 3 HRE53_22135 PF00069 Protein kinase domain HRE53_22135 PF03793 PASTA domain HRE53_22140 PF00963 Cohesin domain HRE53_22140 PF00395 S-layer homology domain HRE53_22145 PF00486 Transcriptional regulatory protein, C terminal HRE53_22145 PF00072 Response regulator receiver domain HRE53_22155 PF02652 L-lactate permease HRE53_22170 PF02417 Chromate transporter HRE53_22175 PF01263 Aldose 1-epimerase HRE53_22185 PF01774 UreD urease accessory protein HRE53_22190 PF00547 Urease, gamma subunit HRE53_22200 PF03358 NADPH-dependent FMN reductase HRE53_22205 PF00699 Urease beta subunit HRE53_22210 PF00069 Protein kinase domain HRE53_22210 PF03793 PASTA domain HRE53_22220 PF08448 PAS fold HRE53_22220 PF13426 PAS domain HRE53_22220 PF08447 PAS fold HRE53_22220 PF05231 MASE1 HRE53_22220 PF00990 Diguanylate cyclase, GGDEF domain HRE53_22220 PF00563 EAL domain HRE53_22225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_22225 PF00672 HAMP domain HRE53_22225 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HRE53_22225 PF00512 His Kinase A (phospho-acceptor) domain HRE53_22225 PF01627 Hpt domain HRE53_22225 PF00072 Response regulator receiver domain HRE53_22230 PF00512 His Kinase A (phospho-acceptor) domain HRE53_22230 PF01627 Hpt domain HRE53_22230 PF00072 Response regulator receiver domain HRE53_22230 PF17149 Periplasmic sensor domain found in signal transduction proteins HRE53_22230 PF00672 HAMP domain HRE53_22230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_22235 PF00072 Response regulator receiver domain HRE53_22240 PF00449 Urease alpha-subunit, N-terminal domain HRE53_22240 PF01979 Amidohydrolase family HRE53_22255 PF01906 Putative heavy-metal-binding HRE53_22270 PF03707 Bacterial signalling protein N terminal repeat HRE53_22270 PF00563 EAL domain HRE53_22270 PF00990 Diguanylate cyclase, GGDEF domain HRE53_22280 PF00664 ABC transporter transmembrane region HRE53_22280 PF00005 ABC transporter HRE53_22285 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HRE53_22285 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HRE53_22290 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HRE53_22290 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HRE53_22290 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HRE53_22290 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HRE53_22295 PF04299 Putative FMN-binding domain HRE53_22305 PF01743 Poly A polymerase head domain HRE53_22305 PF12627 Probable RNA and SrmB- binding site of polymerase A HRE53_22305 PF13735 tRNA nucleotidyltransferase domain 2 putative HRE53_22315 PF13808 DDE_Tnp_1-associated HRE53_22315 PF01609 Transposase DDE domain HRE53_22320 PF13808 DDE_Tnp_1-associated HRE53_22320 PF01609 Transposase DDE domain HRE53_22325 PF01609 Transposase DDE domain HRE53_22325 PF13808 DDE_Tnp_1-associated HRE53_22335 PF13619 KTSC domain HRE53_22335 PF00152 tRNA synthetases class II (D, K and N) HRE53_22335 PF01336 OB-fold nucleic acid binding domain HRE53_22375 PF06480 FtsH Extracellular HRE53_22375 PF01434 Peptidase family M41 HRE53_22375 PF17862 AAA+ lid domain HRE53_22375 PF00004 ATPase family associated with various cellular activities (AAA) HRE53_22390 PF00085 Thioredoxin HRE53_22395 PF00111 2Fe-2S iron-sulfur cluster binding domain HRE53_22405 PF00571 CBS domain HRE53_22405 PF00478 IMP dehydrogenase / GMP reductase domain HRE53_22420 PF01966 HD domain HRE53_22420 PF07698 7TM receptor with intracellular HD hydrolase HRE53_22420 PF07697 7TM-HD extracellular HRE53_22425 PF00578 AhpC/TSA family HRE53_22450 PF03480 Bacterial extracellular solute-binding protein, family 7 HRE53_22460 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HRE53_22470 PF13458 Periplasmic binding protein HRE53_22505 PF00850 Histone deacetylase domain HRE53_22555 PF01209 ubiE/COQ5 methyltransferase family HRE53_22565 PF00793 DAHP synthetase I family HRE53_22565 PF18152 DAHP synthase ferredoxin-like domain HRE53_22575 PF00312 Ribosomal protein S15 HRE53_22580 PF02540 NAD synthase HRE53_22600 PF07804 HipA-like C-terminal domain HRE53_22600 PF13657 HipA N-terminal domain HRE53_22605 PF07804 HipA-like C-terminal domain HRE53_22605 PF13657 HipA N-terminal domain HRE53_22615 PF00331 Glycosyl hydrolase family 10 HRE53_22615 PF02018 Carbohydrate binding domain HRE53_22615 PF06452 Carbohydrate family 9 binding domain-like HRE53_22620 PF00534 Glycosyl transferases group 1 HRE53_22620 PF13439 Glycosyltransferase Family 4 HRE53_22630 PF13439 Glycosyltransferase Family 4 HRE53_22630 PF00534 Glycosyl transferases group 1 HRE53_22650 PF13614 AAA domain HRE53_22650 PF13807 G-rich domain on putative tyrosine kinase HRE53_22650 PF02706 Chain length determinant protein HRE53_22660 PF02397 Bacterial sugar transferase HRE53_22725 PF13419 Haloacid dehalogenase-like hydrolase HRE53_22735 PF07681 DoxX HRE53_22740 PF00772 DnaB-like helicase N terminal domain HRE53_22740 PF03796 DnaB-like helicase C terminal domain HRE53_22740 PF14528 LAGLIDADG-like domain HRE53_22740 PF00772 DnaB-like helicase N terminal domain HRE53_22740 PF03796 DnaB-like helicase C terminal domain HRE53_22740 PF14528 LAGLIDADG-like domain HRE53_22745 PF03948 Ribosomal protein L9, C-terminal domain HRE53_22745 PF01281 Ribosomal protein L9, N-terminal domain HRE53_22805 PF00535 Glycosyl transferase family 2 HRE53_22870 PF01625 Peptide methionine sulfoxide reductase HRE53_22880 PF00069 Protein kinase domain HRE53_22890 PF00849 RNA pseudouridylate synthase HRE53_22895 PF02361 Cobalt transport protein HRE53_22910 PF01168 Alanine racemase, N-terminal domain HRE53_22915 PF04472 Cell division protein SepF HRE53_22920 PF03807 NADP oxidoreductase coenzyme F420-dependent HRE53_22920 PF14748 Pyrroline-5-carboxylate reductase dimerisation HRE53_22940 PF00561 alpha/beta hydrolase fold HRE53_22945 PF01761 3-dehydroquinate synthase HRE53_22950 PF04225 Opacity-associated protein A LysM-like domain HRE53_22950 PF01551 Peptidase family M23 HRE53_22970 PF00361 Proton-conducting membrane transporter HRE53_22975 PF00361 Proton-conducting membrane transporter HRE53_22975 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus HRE53_22975 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HRE53_22980 PF00936 BMC domain HRE53_22985 PF00936 BMC domain HRE53_22990 PF03319 Ethanolamine utilisation protein EutN/carboxysome HRE53_22995 PF00101 Ribulose bisphosphate carboxylase, small chain HRE53_22995 PF00132 Bacterial transferase hexapeptide (six repeats) HRE53_23005 PF00936 BMC domain HRE53_23010 PF00709 Adenylosuccinate synthetase HRE53_23015 PF05175 Methyltransferase small domain HRE53_23015 PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus HRE53_23030 PF00781 Diacylglycerol kinase catalytic domain HRE53_23030 PF02142 MGS-like domain HRE53_23055 PF00293 NUDIX domain HRE53_23060 PF00707 Translation initiation factor IF-3, C-terminal domain HRE53_23060 PF05198 Translation initiation factor IF-3, N-terminal domain HRE53_23075 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HRE53_23075 PF02142 MGS-like domain HRE53_23075 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HRE53_23105 PF03466 LysR substrate binding domain HRE53_23105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRE53_23120 PF01063 Amino-transferase class IV HRE53_23130 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HRE53_23130 PF02874 ATP synthase alpha/beta family, beta-barrel domain HRE53_23135 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain HRE53_23135 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain HRE53_23165 PF00534 Glycosyl transferases group 1 HRE53_23165 PF13439 Glycosyltransferase Family 4 HRE53_23170 PF00931 NB-ARC domain HRE53_23170 PF00400 WD domain, G-beta repeat HRE53_23175 PF00069 Protein kinase domain HRE53_23175 PF00805 Pentapeptide repeats (8 copies) HRE53_23190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_23190 PF00512 His Kinase A (phospho-acceptor) domain HRE53_23190 PF08448 PAS fold HRE53_23190 PF13426 PAS domain HRE53_23190 PF00072 Response regulator receiver domain HRE53_23195 PF00563 EAL domain HRE53_23195 PF00990 Diguanylate cyclase, GGDEF domain HRE53_23195 PF03707 Bacterial signalling protein N terminal repeat HRE53_23200 PF13581 Histidine kinase-like ATPase domain HRE53_23200 PF07568 Histidine kinase HRE53_23200 PF13426 PAS domain HRE53_23210 PF14602 Hexapeptide repeat of succinyl-transferase HRE53_23210 PF12464 Maltose acetyltransferase HRE53_23210 PF00132 Bacterial transferase hexapeptide (six repeats) HRE53_23215 PF13439 Glycosyltransferase Family 4 HRE53_23215 PF00534 Glycosyl transferases group 1 HRE53_23235 PF00563 EAL domain HRE53_23235 PF00990 Diguanylate cyclase, GGDEF domain HRE53_23235 PF08447 PAS fold HRE53_23235 PF08448 PAS fold HRE53_23255 PF07977 FabA-like domain HRE53_23260 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase HRE53_23270 PF01259 SAICAR synthetase HRE53_23280 PF00459 Inositol monophosphatase family HRE53_23290 PF02080 TrkA-C domain HRE53_23290 PF03600 Citrate transporter HRE53_23295 PF01451 Low molecular weight phosphotyrosine protein phosphatase HRE53_23300 PF01758 Sodium Bile acid symporter family HRE53_23305 PF13411 MerR HTH family regulatory protein HRE53_23310 PF02092 Glycyl-tRNA synthetase beta subunit HRE53_23315 PF05193 Peptidase M16 inactive domain HRE53_23315 PF00675 Insulinase (Peptidase family M16) HRE53_23325 PF14492 Elongation Factor G, domain II HRE53_23325 PF00679 Elongation factor G C-terminus HRE53_23325 PF00009 Elongation factor Tu GTP binding domain HRE53_23325 PF03764 Elongation factor G, domain IV HRE53_23330 PF01177 Asp/Glu/Hydantoin racemase HRE53_23335 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HRE53_23340 PF00586 AIR synthase related protein, N-terminal domain HRE53_23340 PF02769 AIR synthase related protein, C-terminal domain HRE53_23350 PF00067 Cytochrome P450 HRE53_23355 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HRE53_23355 PF00925 GTP cyclohydrolase II HRE53_23360 PF02774 Semialdehyde dehydrogenase, dimerisation domain HRE53_23360 PF01118 Semialdehyde dehydrogenase, NAD binding domain HRE53_23385 PF01218 Coproporphyrinogen III oxidase HRE53_23390 PF01048 Phosphorylase superfamily HRE53_23400 PF05198 Translation initiation factor IF-3, N-terminal domain HRE53_23400 PF00707 Translation initiation factor IF-3, C-terminal domain HRE53_23405 PF01435 Peptidase family M48 HRE53_23415 PF16657 Maltogenic Amylase, C-terminal domain HRE53_23415 PF02903 Alpha amylase, N-terminal ig-like domain HRE53_23415 PF00128 Alpha amylase, catalytic domain HRE53_23425 PF01476 LysM domain HRE53_23425 PF08525 Opacity-associated protein A N-terminal motif HRE53_23425 PF01551 Peptidase family M23 HRE53_23430 PF08279 HTH domain HRE53_23430 PF02237 Biotin protein ligase C terminal domain HRE53_23430 PF03099 Biotin/lipoate A/B protein ligase family HRE53_23435 PF02578 Multi-copper polyphenol oxidoreductase laccase HRE53_23455 PF00082 Subtilase family HRE53_23460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRE53_23460 PF03466 LysR substrate binding domain HRE53_23465 PF02678 Pirin HRE53_23465 PF17954 Quercetinase C-terminal cupin domain HRE53_23475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_23475 PF00512 His Kinase A (phospho-acceptor) domain HRE53_23475 PF09308 LuxQ, periplasmic HRE53_23475 PF00072 Response regulator receiver domain HRE53_23480 PF00582 Universal stress protein family HRE53_23485 PF00162 Phosphoglycerate kinase HRE53_23500 PF13393 Histidyl-tRNA synthetase HRE53_23500 PF03129 Anticodon binding domain HRE53_23520 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HRE53_23525 PF00005 ABC transporter HRE53_23525 PF02687 FtsX-like permease family HRE53_23525 PF12704 MacB-like periplasmic core domain HRE53_23530 PF00005 ABC transporter HRE53_23535 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain HRE53_23535 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain HRE53_23535 PF06827 Zinc finger found in FPG and IleRS HRE53_23550 PF00563 EAL domain HRE53_23550 PF00990 Diguanylate cyclase, GGDEF domain HRE53_23550 PF08447 PAS fold HRE53_23550 PF08448 PAS fold HRE53_23555 PF02163 Peptidase family M50 HRE53_23555 PF00571 CBS domain HRE53_23560 PF03099 Biotin/lipoate A/B protein ligase family HRE53_23570 PF06463 Molybdenum Cofactor Synthesis C HRE53_23570 PF04055 Radical SAM superfamily HRE53_23575 PF00462 Glutaredoxin HRE53_23580 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain HRE53_23580 PF02951 Prokaryotic glutathione synthetase, N-terminal domain HRE53_23585 PF16363 GDP-mannose 4,6 dehydratase HRE53_23620 PF04434 SWIM zinc finger HRE53_23625 PF00872 Transposase, Mutator family HRE53_23655 PF00270 DEAD/DEAH box helicase HRE53_23655 PF00271 Helicase conserved C-terminal domain HRE53_23655 PF00570 HRDC domain HRE53_23655 PF16124 RecQ zinc-binding HRE53_23655 PF09382 RQC domain HRE53_23675 PF11378 Protein of unknown function (DUF3181) HRE53_23685 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HRE53_23685 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HRE53_23690 PF02163 Peptidase family M50 HRE53_23690 PF17820 PDZ domain HRE53_23695 PF08448 PAS fold HRE53_23695 PF00990 Diguanylate cyclase, GGDEF domain HRE53_23695 PF00563 EAL domain HRE53_23700 PF00497 Bacterial extracellular solute-binding proteins, family 3 HRE53_23720 PF01594 AI-2E family transporter HRE53_23730 PF02374 Anion-transporting ATPase HRE53_23730 PF17886 HSP20-like domain found in ArsA HRE53_23740 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit HRE53_23745 PF00106 short chain dehydrogenase HRE53_23750 PF01227 GTP cyclohydrolase I HRE53_23760 PF00072 Response regulator receiver domain HRE53_23785 PF01979 Amidohydrolase family HRE53_23795 PF02794 RTX toxin acyltransferase family HRE53_23850 PF00577 Outer membrane usher protein HRE53_23850 PF13954 PapC N-terminal domain HRE53_23855 PF00561 alpha/beta hydrolase fold HRE53_23865 PF01339 CheB methylesterase HRE53_23865 PF00072 Response regulator receiver domain HRE53_23870 PF18415 Histidine kinase receptor ArcB trans-membrane domain HRE53_23870 PF00989 PAS fold HRE53_23870 PF00072 Response regulator receiver domain HRE53_23870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_23870 PF01627 Hpt domain HRE53_23870 PF00512 His Kinase A (phospho-acceptor) domain HRE53_23875 PF13188 PAS domain HRE53_23875 PF00989 PAS fold HRE53_23875 PF00512 His Kinase A (phospho-acceptor) domain HRE53_23875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_23890 PF00486 Transcriptional regulatory protein, C terminal HRE53_23890 PF00072 Response regulator receiver domain HRE53_23895 PF00440 Bacterial regulatory proteins, tetR family HRE53_23905 PF00072 Response regulator receiver domain HRE53_23905 PF02954 Bacterial regulatory protein, Fis family HRE53_23905 PF00158 Sigma-54 interaction domain HRE53_23920 PF01522 Polysaccharide deacetylase HRE53_23945 PF00672 HAMP domain HRE53_23945 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HRE53_23945 PF00072 Response regulator receiver domain HRE53_23945 PF01627 Hpt domain HRE53_23945 PF00512 His Kinase A (phospho-acceptor) domain HRE53_23945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_23950 PF13230 Glutamine amidotransferases class-II HRE53_23955 PF12867 DinB superfamily HRE53_23955 PF03781 Sulfatase-modifying factor enzyme 1 HRE53_23960 PF10017 Histidine-specific methyltransferase, SAM-dependent HRE53_23965 PF00012 Hsp70 protein HRE53_23970 PF01556 DnaJ C terminal domain HRE53_23970 PF00226 DnaJ domain HRE53_23975 PF04011 LemA family HRE53_23995 PF04244 Deoxyribodipyrimidine photo-lyase-related protein HRE53_24015 PF00069 Protein kinase domain HRE53_24015 PF00805 Pentapeptide repeats (8 copies) HRE53_24025 PF00069 Protein kinase domain HRE53_24030 PF00535 Glycosyl transferase family 2 HRE53_24035 PF00438 S-adenosylmethionine synthetase, N-terminal domain HRE53_24035 PF02772 S-adenosylmethionine synthetase, central domain HRE53_24035 PF02773 S-adenosylmethionine synthetase, C-terminal domain HRE53_24040 PF13419 Haloacid dehalogenase-like hydrolase HRE53_24105 PF00459 Inositol monophosphatase family HRE53_24120 PF00756 Putative esterase HRE53_24130 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HRE53_24130 PF01926 50S ribosome-binding GTPase HRE53_24145 PF00069 Protein kinase domain HRE53_24165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_24165 PF00183 Hsp90 protein HRE53_24170 PF08446 PAS fold HRE53_24170 PF00360 Phytochrome region HRE53_24170 PF00512 His Kinase A (phospho-acceptor) domain HRE53_24170 PF01590 GAF domain HRE53_24170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_24180 PF00176 SNF2 family N-terminal domain HRE53_24180 PF00271 Helicase conserved C-terminal domain HRE53_24180 PF12419 SNF2 Helicase protein HRE53_24185 PF01138 3' exoribonuclease family, domain 1 HRE53_24185 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain HRE53_24185 PF00013 KH domain HRE53_24185 PF03725 3' exoribonuclease family, domain 2 HRE53_24185 PF00575 S1 RNA binding domain HRE53_24190 PF08331 Domain of unknown function (DUF1730) HRE53_24255 PF00216 Bacterial DNA-binding protein HRE53_24260 PF00155 Aminotransferase class I and II HRE53_24265 PF07992 Pyridine nucleotide-disulphide oxidoreductase HRE53_24265 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HRE53_24270 PF13409 Glutathione S-transferase, N-terminal domain HRE53_24275 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV HRE53_24290 PF01047 MarR family HRE53_24295 PF00360 Phytochrome region HRE53_24295 PF08446 PAS fold HRE53_24295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_24295 PF01590 GAF domain HRE53_24295 PF00512 His Kinase A (phospho-acceptor) domain HRE53_24300 PF00072 Response regulator receiver domain HRE53_24305 PF02954 Bacterial regulatory protein, Fis family HRE53_24305 PF00158 Sigma-54 interaction domain HRE53_24305 PF00072 Response regulator receiver domain HRE53_24310 PF00512 His Kinase A (phospho-acceptor) domain HRE53_24310 PF08446 PAS fold HRE53_24310 PF00360 Phytochrome region HRE53_24310 PF01590 GAF domain HRE53_24310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_24315 PF01339 CheB methylesterase HRE53_24315 PF08448 PAS fold HRE53_24315 PF03705 CheR methyltransferase, all-alpha domain HRE53_24315 PF01739 CheR methyltransferase, SAM binding domain HRE53_24335 PF00916 Sulfate permease family HRE53_24335 PF01740 STAS domain HRE53_24340 PF02696 Uncharacterized ACR, YdiU/UPF0061 family HRE53_24370 PF00114 Pilin (bacterial filament) HRE53_24370 PF07963 Prokaryotic N-terminal methylation motif HRE53_24380 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) HRE53_24380 PF00722 Glycosyl hydrolases family 16 HRE53_24385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_24385 PF18719 ArlS sensor domain HRE53_24385 PF00512 His Kinase A (phospho-acceptor) domain HRE53_24395 PF02492 CobW/HypB/UreG, nucleotide-binding domain HRE53_24395 PF07683 Cobalamin synthesis protein cobW C-terminal domain HRE53_24405 PF02310 B12 binding domain HRE53_24405 PF04055 Radical SAM superfamily HRE53_24415 PF04794 YdjC-like protein HRE53_24430 PF00977 Histidine biosynthesis protein HRE53_24440 PF16123 Hydroxyacylglutathione hydrolase C-terminus HRE53_24440 PF00753 Metallo-beta-lactamase superfamily HRE53_24445 PF00953 Glycosyl transferase family 4 HRE53_24445 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 HRE53_24455 PF00005 ABC transporter HRE53_24455 PF16326 ABC transporter C-terminal domain HRE53_24455 PF12848 ABC transporter HRE53_24460 PF01904 Protein of unknown function DUF72 HRE53_24465 PF00069 Protein kinase domain HRE53_24480 PF00067 Cytochrome P450 HRE53_24485 PF01808 AICARFT/IMPCHase bienzyme HRE53_24485 PF02142 MGS-like domain HRE53_24490 PF00936 BMC domain HRE53_24495 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HRE53_24495 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HRE53_24495 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HRE53_24500 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HRE53_24500 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HRE53_24505 PF13537 Glutamine amidotransferase domain HRE53_24505 PF00733 Asparagine synthase HRE53_24520 PF08241 Methyltransferase domain HRE53_24525 PF13847 Methyltransferase domain HRE53_24550 PF00535 Glycosyl transferase family 2 HRE53_24555 PF03808 Glycosyl transferase WecB/TagA/CpsF family HRE53_24560 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain HRE53_24560 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain HRE53_24560 PF01488 Shikimate / quinate 5-dehydrogenase HRE53_24565 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded HRE53_24580 PF03971 Monomeric isocitrate dehydrogenase HRE53_24585 PF00180 Isocitrate/isopropylmalate dehydrogenase HRE53_24595 PF00005 ABC transporter HRE53_24605 PF16363 GDP-mannose 4,6 dehydratase HRE53_24610 PF08486 Stage II sporulation protein HRE53_24630 PF00483 Nucleotidyl transferase HRE53_24630 PF01050 Mannose-6-phosphate isomerase HRE53_24635 PF01521 Iron-sulphur cluster biosynthesis HRE53_24660 PF00521 DNA gyrase/topoisomerase IV, subunit A HRE53_24660 PF03989 DNA gyrase C-terminal domain, beta-propeller HRE53_24670 PF00155 Aminotransferase class I and II HRE53_24690 PF00534 Glycosyl transferases group 1 HRE53_24690 PF13439 Glycosyltransferase Family 4 HRE53_24695 PF13439 Glycosyltransferase Family 4 HRE53_24695 PF00534 Glycosyl transferases group 1 HRE53_24700 PF13614 AAA domain HRE53_24725 PF00535 Glycosyl transferase family 2 HRE53_24730 PF00005 ABC transporter HRE53_24730 PF00664 ABC transporter transmembrane region HRE53_24750 PF00534 Glycosyl transferases group 1 HRE53_24750 PF13439 Glycosyltransferase Family 4 HRE53_24755 PF00535 Glycosyl transferase family 2 HRE53_24800 PF00512 His Kinase A (phospho-acceptor) domain HRE53_24800 PF09308 LuxQ, periplasmic HRE53_24800 PF00072 Response regulator receiver domain HRE53_24800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_24825 PF00421 Photosystem II protein HRE53_24830 PF00258 Flavodoxin HRE53_24840 PF00027 Cyclic nucleotide-binding domain HRE53_24840 PF13545 Crp-like helix-turn-helix domain HRE53_24845 PF00578 AhpC/TSA family HRE53_24850 PF01494 FAD binding domain HRE53_24865 PF13202 EF hand HRE53_24865 PF00923 Transaldolase/Fructose-6-phosphate aldolase HRE53_24875 PF07995 Glucose / Sorbosone dehydrogenase HRE53_24885 PF01654 Cytochrome bd terminal oxidase subunit I HRE53_24915 PF00005 ABC transporter HRE53_24925 PF09115 DNA polymerase III, delta subunit, C terminal HRE53_24930 PF02223 Thymidylate kinase HRE53_24970 PF00990 Diguanylate cyclase, GGDEF domain HRE53_24970 PF00072 Response regulator receiver domain HRE53_24975 PF01975 Survival protein SurE HRE53_24985 PF01434 Peptidase family M41 HRE53_24985 PF17862 AAA+ lid domain HRE53_24985 PF00004 ATPase family associated with various cellular activities (AAA) HRE53_24995 PF00862 Sucrose synthase HRE53_24995 PF00534 Glycosyl transferases group 1 HRE53_25005 PF00072 Response regulator receiver domain HRE53_25010 PF01627 Hpt domain HRE53_25010 PF00672 HAMP domain HRE53_25010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_25010 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HRE53_25010 PF00072 Response regulator receiver domain HRE53_25010 PF00512 His Kinase A (phospho-acceptor) domain HRE53_25015 PF00909 Ammonium Transporter Family HRE53_25015 PF00672 HAMP domain HRE53_25025 PF07683 Cobalamin synthesis protein cobW C-terminal domain HRE53_25025 PF02492 CobW/HypB/UreG, nucleotide-binding domain HRE53_25035 PF00114 Pilin (bacterial filament) HRE53_25035 PF07963 Prokaryotic N-terminal methylation motif HRE53_25050 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family HRE53_25065 PF02347 Glycine cleavage system P-protein HRE53_25100 PF00069 Protein kinase domain HRE53_25100 PF00805 Pentapeptide repeats (8 copies) HRE53_25110 PF01384 Phosphate transporter family HRE53_25130 PF00512 His Kinase A (phospho-acceptor) domain HRE53_25130 PF18415 Histidine kinase receptor ArcB trans-membrane domain HRE53_25130 PF01627 Hpt domain HRE53_25130 PF00989 PAS fold HRE53_25130 PF00072 Response regulator receiver domain HRE53_25130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_25135 PF00072 Response regulator receiver domain HRE53_25150 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HRE53_25150 PF07992 Pyridine nucleotide-disulphide oxidoreductase HRE53_25165 PF01475 Ferric uptake regulator family HRE53_25170 PF01208 Uroporphyrinogen decarboxylase (URO-D) HRE53_25195 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain HRE53_25195 PF02951 Prokaryotic glutathione synthetase, N-terminal domain HRE53_25200 PF00892 EamA-like transporter family HRE53_25220 PF03808 Glycosyl transferase WecB/TagA/CpsF family HRE53_25225 PF00708 Acylphosphatase HRE53_25230 PF00072 Response regulator receiver domain HRE53_25230 PF00486 Transcriptional regulatory protein, C terminal HRE53_25235 PF00072 Response regulator receiver domain HRE53_25235 PF00486 Transcriptional regulatory protein, C terminal HRE53_25240 PF00872 Transposase, Mutator family HRE53_25265 PF00361 Proton-conducting membrane transporter HRE53_25275 PF02469 Fasciclin domain HRE53_25345 PF03497 Anthrax toxin LF subunit HRE53_25345 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain HRE53_25380 PF03069 Acetamidase/Formamidase family HRE53_25405 PF00005 ABC transporter HRE53_25405 PF12399 Branched-chain amino acid ATP-binding cassette transporter HRE53_25410 PF00005 ABC transporter HRE53_25415 PF03466 LysR substrate binding domain HRE53_25415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRE53_25435 PF01609 Transposase DDE domain HRE53_25435 PF13808 DDE_Tnp_1-associated HRE53_25445 PF00732 GMC oxidoreductase HRE53_25445 PF05199 GMC oxidoreductase HRE53_25510 PF00872 Transposase, Mutator family HRE53_25545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_25545 PF00512 His Kinase A (phospho-acceptor) domain HRE53_25555 PF00990 Diguanylate cyclase, GGDEF domain HRE53_25555 PF00072 Response regulator receiver domain HRE53_25560 PF09308 LuxQ, periplasmic HRE53_25560 PF00072 Response regulator receiver domain HRE53_25560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_25560 PF00512 His Kinase A (phospho-acceptor) domain HRE53_25565 PF00931 NB-ARC domain HRE53_25565 PF00400 WD domain, G-beta repeat HRE53_25590 PF07730 Histidine kinase HRE53_25590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_25600 PF00196 Bacterial regulatory proteins, luxR family HRE53_25600 PF00072 Response regulator receiver domain HRE53_25605 PF13462 Thioredoxin HRE53_25605 PF06965 Na+/H+ antiporter 1 HRE53_25610 PF12833 Helix-turn-helix domain HRE53_25615 PF12833 Helix-turn-helix domain HRE53_25625 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain HRE53_25625 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HRE53_25630 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain HRE53_25630 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain HRE53_25635 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain HRE53_25650 PF00732 GMC oxidoreductase HRE53_25650 PF05199 GMC oxidoreductase HRE53_25660 PF13537 Glutamine amidotransferase domain HRE53_25660 PF00733 Asparagine synthase HRE53_25670 PF04960 Glutaminase HRE53_25675 PF00571 CBS domain HRE53_25675 PF00005 ABC transporter HRE53_25680 PF00528 Binding-protein-dependent transport system inner membrane component HRE53_25695 PF01695 IstB-like ATP binding protein HRE53_25705 PF01610 Transposase HRE53_25705 PF13683 Integrase core domain HRE53_25725 PF01609 Transposase DDE domain HRE53_25725 PF13808 DDE_Tnp_1-associated HRE53_25730 PF01609 Transposase DDE domain HRE53_25730 PF13808 DDE_Tnp_1-associated HRE53_25735 PF13808 DDE_Tnp_1-associated HRE53_25735 PF01609 Transposase DDE domain HRE53_25770 PF10664 Cyanobacterial and plastid NDH-1 subunit M HRE53_25800 PF00293 NUDIX domain HRE53_25825 PF13358 DDE superfamily endonuclease HRE53_25870 PF00226 DnaJ domain HRE53_25870 PF01556 DnaJ C terminal domain HRE53_25870 PF00684 DnaJ central domain HRE53_25875 PF01025 GrpE HRE53_25890 PF00575 S1 RNA binding domain HRE53_25890 PF00773 RNB domain HRE53_25890 PF08206 Ribonuclease B OB domain HRE53_25890 PF17876 Cold shock domain HRE53_25985 PF13180 PDZ domain HRE53_26030 PF00360 Phytochrome region HRE53_26030 PF08446 PAS fold HRE53_26030 PF01590 GAF domain HRE53_26030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_26030 PF00512 His Kinase A (phospho-acceptor) domain HRE53_26035 PF00158 Sigma-54 interaction domain HRE53_26035 PF00072 Response regulator receiver domain HRE53_26035 PF02954 Bacterial regulatory protein, Fis family HRE53_26040 PF01590 GAF domain HRE53_26040 PF00360 Phytochrome region HRE53_26040 PF08446 PAS fold HRE53_26040 PF00512 His Kinase A (phospho-acceptor) domain HRE53_26040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_26050 PF04954 Siderophore-interacting protein HRE53_26050 PF08021 Siderophore-interacting FAD-binding domain HRE53_26070 PF04542 Sigma-70 region 2 HRE53_26070 PF00140 Sigma-70 factor, region 1.2 HRE53_26070 PF03979 Sigma-70 factor, region 1.1 HRE53_26070 PF04539 Sigma-70 region 3 HRE53_26070 PF04545 Sigma-70, region 4 HRE53_26075 PF00072 Response regulator receiver domain HRE53_26085 PF01548 Transposase HRE53_26095 PF08448 PAS fold HRE53_26095 PF08447 PAS fold HRE53_26095 PF05231 MASE1 HRE53_26095 PF00990 Diguanylate cyclase, GGDEF domain HRE53_26095 PF00563 EAL domain HRE53_26095 PF13426 PAS domain HRE53_26135 PF13581 Histidine kinase-like ATPase domain HRE53_26135 PF07568 Histidine kinase HRE53_26135 PF13426 PAS domain HRE53_26155 PF00672 HAMP domain HRE53_26155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_26155 PF00512 His Kinase A (phospho-acceptor) domain HRE53_26155 PF01627 Hpt domain HRE53_26155 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HRE53_26155 PF00072 Response regulator receiver domain HRE53_26160 PF00072 Response regulator receiver domain HRE53_26165 PF00072 Response regulator receiver domain HRE53_26220 PF08448 PAS fold HRE53_26220 PF00990 Diguanylate cyclase, GGDEF domain HRE53_26220 PF00563 EAL domain HRE53_26310 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) HRE53_26330 PF00486 Transcriptional regulatory protein, C terminal HRE53_26330 PF00072 Response regulator receiver domain HRE53_26345 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) HRE53_26395 PF00069 Protein kinase domain HRE53_26430 PF08460 Bacterial SH3 domain HRE53_26430 PF01551 Peptidase family M23 HRE53_26435 PF00072 Response regulator receiver domain HRE53_26435 PF01627 Hpt domain HRE53_26435 PF00672 HAMP domain HRE53_26435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_26435 PF00512 His Kinase A (phospho-acceptor) domain HRE53_26435 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HRE53_26460 PF01610 Transposase HRE53_26460 PF13683 Integrase core domain HRE53_26465 PF00665 Integrase core domain HRE53_26470 PF01695 IstB-like ATP binding protein HRE53_26475 PF00072 Response regulator receiver domain HRE53_26495 PF13426 PAS domain HRE53_26495 PF07568 Histidine kinase HRE53_26495 PF13581 Histidine kinase-like ATPase domain HRE53_26515 PF00072 Response regulator receiver domain HRE53_26530 PF00498 FHA domain HRE53_26530 PF00990 Diguanylate cyclase, GGDEF domain HRE53_26530 PF00563 EAL domain HRE53_26535 PF01590 GAF domain HRE53_26535 PF00360 Phytochrome region HRE53_26535 PF00990 Diguanylate cyclase, GGDEF domain HRE53_26535 PF00563 EAL domain HRE53_26545 PF00990 Diguanylate cyclase, GGDEF domain HRE53_26545 PF00563 EAL domain HRE53_26545 PF08448 PAS fold HRE53_26550 PF00563 EAL domain HRE53_26550 PF00990 Diguanylate cyclase, GGDEF domain HRE53_26550 PF08448 PAS fold HRE53_26555 PF08460 Bacterial SH3 domain HRE53_26555 PF01551 Peptidase family M23 HRE53_26570 PF00999 Sodium/hydrogen exchanger family HRE53_26575 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HRE53_26580 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HRE53_26580 PF00361 Proton-conducting membrane transporter HRE53_26580 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus HRE53_26625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRE53_26625 PF03466 LysR substrate binding domain HRE53_26640 PF00665 Integrase core domain HRE53_26645 PF01695 IstB-like ATP binding protein HRE53_26670 PF08865 Domain of unknown function (DUF1830) HRE53_26690 PF02899 Phage integrase, N-terminal SAM-like domain HRE53_26690 PF00589 Phage integrase family HRE53_26695 PF02899 Phage integrase, N-terminal SAM-like domain HRE53_26695 PF00589 Phage integrase family HRE53_26720 PF05593 RHS Repeat HRE53_26740 PF01695 IstB-like ATP binding protein HRE53_26745 PF00665 Integrase core domain HRE53_26750 PF00665 Integrase core domain HRE53_26755 PF00440 Bacterial regulatory proteins, tetR family HRE53_26755 PF17925 Tetracyclin repressor-like, C-terminal domain HRE53_26775 PF07715 TonB-dependent Receptor Plug Domain HRE53_26775 PF00593 TonB dependent receptor HRE53_26780 PF07690 Major Facilitator Superfamily HRE53_26785 PF00106 short chain dehydrogenase HRE53_26790 PF00425 chorismate binding enzyme HRE53_26795 PF13193 AMP-binding enzyme C-terminal domain HRE53_26795 PF00501 AMP-binding enzyme HRE53_26800 PF00550 Phosphopantetheine attachment site HRE53_26800 PF00857 Isochorismatase family HRE53_26805 PF00501 AMP-binding enzyme HRE53_26805 PF00668 Condensation domain HRE53_26805 PF00501 AMP-binding enzyme HRE53_26805 PF13193 AMP-binding enzyme C-terminal domain HRE53_26805 PF00668 Condensation domain HRE53_26805 PF00550 Phosphopantetheine attachment site HRE53_26805 PF13193 AMP-binding enzyme C-terminal domain HRE53_26805 PF00550 Phosphopantetheine attachment site HRE53_26805 PF00975 Thioesterase domain HRE53_26805 PF00975 Thioesterase domain HRE53_26810 PF13847 Methyltransferase domain HRE53_26810 PF03551 Transcriptional regulator PadR-like family HRE53_26830 PF13358 DDE superfamily endonuclease HRE53_26840 PF07690 Major Facilitator Superfamily HRE53_26875 PF01526 Tn3 transposase DDE domain HRE53_26875 PF13700 Domain of unknown function (DUF4158) HRE53_26880 PF02899 Phage integrase, N-terminal SAM-like domain HRE53_26880 PF00589 Phage integrase family HRE53_26920 PF00196 Bacterial regulatory proteins, luxR family HRE53_26920 PF00072 Response regulator receiver domain HRE53_26925 PF00512 His Kinase A (phospho-acceptor) domain HRE53_26925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_26925 PF09456 RcsC Alpha-Beta-Loop (ABL) HRE53_26925 PF00072 Response regulator receiver domain HRE53_26930 PF06745 KaiC HRE53_26930 PF18073 Rubredoxin metal binding domain HRE53_26935 PF00672 HAMP domain HRE53_26935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_26935 PF18698 Histidine kinase sensor domain HRE53_26935 PF00512 His Kinase A (phospho-acceptor) domain HRE53_26935 PF00989 PAS fold HRE53_26940 PF04539 Sigma-70 region 3 HRE53_26940 PF00140 Sigma-70 factor, region 1.2 HRE53_26940 PF04545 Sigma-70, region 4 HRE53_26940 PF04542 Sigma-70 region 2 HRE53_26955 PF00999 Sodium/hydrogen exchanger family HRE53_26955 PF00582 Universal stress protein family HRE53_26975 PF08443 RimK-like ATP-grasp domain HRE53_26975 PF18030 RimK PreATP-grasp domain HRE53_26980 PF08443 RimK-like ATP-grasp domain HRE53_26980 PF18030 RimK PreATP-grasp domain HRE53_27045 PF00485 Phosphoribulokinase / Uridine kinase family HRE53_27055 PF17762 HTH domain found in ParB protein HRE53_27055 PF02195 ParB-like nuclease domain HRE53_27075 PF00072 Response regulator receiver domain HRE53_27085 PF13545 Crp-like helix-turn-helix domain HRE53_27220 PF00216 Bacterial DNA-binding protein HRE53_27230 PF03979 Sigma-70 factor, region 1.1 HRE53_27230 PF00140 Sigma-70 factor, region 1.2 HRE53_27230 PF04542 Sigma-70 region 2 HRE53_27230 PF04545 Sigma-70, region 4 HRE53_27230 PF04539 Sigma-70 region 3 HRE53_27255 PF03979 Sigma-70 factor, region 1.1 HRE53_27255 PF00140 Sigma-70 factor, region 1.2 HRE53_27255 PF04542 Sigma-70 region 2 HRE53_27255 PF04539 Sigma-70 region 3 HRE53_27255 PF04545 Sigma-70, region 4 HRE53_27260 PF01751 Toprim domain HRE53_27260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_27260 PF00986 DNA gyrase B subunit, carboxyl terminus HRE53_27260 PF00204 DNA gyrase B HRE53_27340 PF01443 Viral (Superfamily 1) RNA helicase HRE53_27340 PF17841 BID domain of Bartonella effector protein (Bep) HRE53_27340 PF03389 MobA/MobL family HRE53_27525 PF13808 DDE_Tnp_1-associated HRE53_27525 PF01609 Transposase DDE domain HRE53_27565 PF01695 IstB-like ATP binding protein HRE53_27570 PF00665 Integrase core domain HRE53_27615 PF00665 Integrase core domain HRE53_27620 PF01695 IstB-like ATP binding protein HRE53_27650 PF00795 Carbon-nitrogen hydrolase HRE53_27665 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) HRE53_27675 PF01695 IstB-like ATP binding protein HRE53_27685 PF00665 Integrase core domain HRE53_27705 PF00004 ATPase family associated with various cellular activities (AAA) HRE53_27705 PF17862 AAA+ lid domain HRE53_27705 PF01434 Peptidase family M41 HRE53_27710 PF13460 NAD(P)H-binding HRE53_27710 PF11066 Protein of unknown function (DUF2867) HRE53_27730 PF08241 Methyltransferase domain HRE53_27735 PF01965 DJ-1/PfpI family HRE53_27795 PF00665 Integrase core domain HRE53_27810 PF01740 STAS domain HRE53_27810 PF00916 Sulfate permease family HRE53_27815 PF11127 Protein of unknown function (DUF2892) HRE53_27815 PF00581 Rhodanese-like domain HRE53_27820 PF04273 Putative phosphatase (DUF442) HRE53_27820 PF00753 Metallo-beta-lactamase superfamily HRE53_27835 PF02195 ParB-like nuclease domain HRE53_27840 PF13614 AAA domain HRE53_27885 PF13180 PDZ domain HRE53_27885 PF17820 PDZ domain HRE53_27945 PF00582 Universal stress protein family HRE53_27970 PF00166 Chaperonin 10 Kd subunit HRE53_27975 PF00118 TCP-1/cpn60 chaperonin family HRE53_27980 PF11738 Protein of unknown function (DUF3298) HRE53_27980 PF01522 Polysaccharide deacetylase HRE53_27980 PF13739 Deacetylase PdaC HRE53_28000 PF01025 GrpE HRE53_28115 PF03793 PASTA domain HRE53_28115 PF00069 Protein kinase domain HRE53_28170 PF08479 POTRA domain, ShlB-type HRE53_28170 PF17287 POTRA domain HRE53_28170 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB HRE53_28190 PF00067 Cytochrome P450 HRE53_28215 PF04472 Cell division protein SepF HRE53_28235 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) HRE53_28255 PF00486 Transcriptional regulatory protein, C terminal HRE53_28255 PF00072 Response regulator receiver domain HRE53_28300 PF01695 IstB-like ATP binding protein HRE53_28305 PF00665 Integrase core domain HRE53_28310 PF00665 Integrase core domain HRE53_28315 PF01695 IstB-like ATP binding protein HRE53_28365 PF00072 Response regulator receiver domain HRE53_28365 PF00486 Transcriptional regulatory protein, C terminal HRE53_28370 PF00512 His Kinase A (phospho-acceptor) domain HRE53_28370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_28370 PF08448 PAS fold HRE53_28370 PF13188 PAS domain HRE53_28370 PF00072 Response regulator receiver domain HRE53_28375 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) HRE53_28385 PF08865 Domain of unknown function (DUF1830) HRE53_28405 PF04324 BFD-like [2Fe-2S] binding domain HRE53_28405 PF07992 Pyridine nucleotide-disulphide oxidoreductase HRE53_28420 PF13340 Putative transposase of IS4/5 family (DUF4096) HRE53_28450 PF06514 Photosystem II 12 kDa extrinsic protein (PsbU) HRE53_28465 PF01695 IstB-like ATP binding protein HRE53_28470 PF01695 IstB-like ATP binding protein HRE53_28485 PF06514 Photosystem II 12 kDa extrinsic protein (PsbU) HRE53_28490 PF02769 AIR synthase related protein, C-terminal domain HRE53_28490 PF00586 AIR synthase related protein, N-terminal domain HRE53_28490 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain HRE53_28510 PF00575 S1 RNA binding domain HRE53_28510 PF00773 RNB domain HRE53_28510 PF08206 Ribonuclease B OB domain HRE53_28510 PF17876 Cold shock domain HRE53_28525 PF00154 recA bacterial DNA recombination protein HRE53_28530 PF14490 Helix-hairpin-helix containing domain HRE53_28530 PF13538 UvrD-like helicase C-terminal domain HRE53_28530 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain HRE53_28545 PF01025 GrpE HRE53_28555 PF00226 DnaJ domain HRE53_28555 PF01556 DnaJ C terminal domain HRE53_28555 PF00684 DnaJ central domain HRE53_28595 PF01695 IstB-like ATP binding protein HRE53_28600 PF00665 Integrase core domain HRE53_28610 PF00990 Diguanylate cyclase, GGDEF domain HRE53_28610 PF00072 Response regulator receiver domain HRE53_28615 PF13426 PAS domain HRE53_28615 PF00512 His Kinase A (phospho-acceptor) domain HRE53_28615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_28615 PF00672 HAMP domain HRE53_28620 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) HRE53_28630 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) HRE53_28655 PF06514 Photosystem II 12 kDa extrinsic protein (PsbU) HRE53_28660 PF13808 DDE_Tnp_1-associated HRE53_28660 PF01609 Transposase DDE domain HRE53_28675 PF00365 Phosphofructokinase HRE53_28680 PF01924 Hydrogenase formation hypA family HRE53_28690 PF09317 Domain of unknown function (DUF1974) HRE53_28690 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HRE53_28690 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HRE53_28695 PF00108 Thiolase, N-terminal domain HRE53_28695 PF02803 Thiolase, C-terminal domain HRE53_28715 PF12146 Serine aminopeptidase, S33 HRE53_28715 PF12147 Putative methyltransferase HRE53_28720 PF00011 Hsp20/alpha crystallin family HRE53_28735 PF00005 ABC transporter HRE53_28760 PF00586 AIR synthase related protein, N-terminal domain HRE53_28760 PF02769 AIR synthase related protein, C-terminal domain HRE53_28765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_28765 PF00512 His Kinase A (phospho-acceptor) domain HRE53_28765 PF01627 Hpt domain HRE53_28765 PF00989 PAS fold HRE53_28765 PF00072 Response regulator receiver domain HRE53_28765 PF00497 Bacterial extracellular solute-binding proteins, family 3 HRE53_28770 PF01590 GAF domain HRE53_28770 PF08446 PAS fold HRE53_28770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_28770 PF00512 His Kinase A (phospho-acceptor) domain HRE53_28770 PF00360 Phytochrome region HRE53_28775 PF00391 PEP-utilising enzyme, mobile domain HRE53_28775 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HRE53_28775 PF02896 PEP-utilising enzyme, TIM barrel domain HRE53_28780 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HRE53_28795 PF00999 Sodium/hydrogen exchanger family HRE53_28805 PF00119 ATP synthase A chain HRE53_28810 PF00137 ATP synthase subunit C HRE53_28815 PF00430 ATP synthase B/B' CF(0) HRE53_28825 PF00231 ATP synthase HRE53_28850 PF00582 Universal stress protein family HRE53_28855 PF00582 Universal stress protein family HRE53_28865 PF00037 4Fe-4S binding domain HRE53_28865 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HRE53_28865 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region HRE53_28880 PF00384 Molybdopterin oxidoreductase HRE53_28880 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal HRE53_28880 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region HRE53_28885 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HRE53_28890 PF00571 CBS domain HRE53_28905 PF00374 Nickel-dependent hydrogenase HRE53_28910 PF01455 HupF/HypC family HRE53_28935 PF02492 CobW/HypB/UreG, nucleotide-binding domain HRE53_28940 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA HRE53_28965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_28965 PF08448 PAS fold HRE53_28965 PF13188 PAS domain HRE53_28965 PF00512 His Kinase A (phospho-acceptor) domain HRE53_28965 PF00072 Response regulator receiver domain HRE53_28975 PF04545 Sigma-70, region 4 HRE53_28975 PF00140 Sigma-70 factor, region 1.2 HRE53_28975 PF04542 Sigma-70 region 2 HRE53_28975 PF04539 Sigma-70 region 3 HRE53_28990 PF08240 Alcohol dehydrogenase GroES-like domain HRE53_28990 PF00107 Zinc-binding dehydrogenase HRE53_29000 PF00166 Chaperonin 10 Kd subunit HRE53_29005 PF00118 TCP-1/cpn60 chaperonin family HRE53_29040 PF00665 Integrase core domain HRE53_29045 PF01695 IstB-like ATP binding protein HRE53_29065 PF02386 Cation transport protein HRE53_29070 PF02080 TrkA-C domain HRE53_29070 PF02254 TrkA-N domain HRE53_29075 PF02254 TrkA-N domain HRE53_29075 PF02080 TrkA-C domain HRE53_29080 PF00072 Response regulator receiver domain HRE53_29080 PF00158 Sigma-54 interaction domain HRE53_29080 PF02954 Bacterial regulatory protein, Fis family HRE53_29095 PF02281 Transposase Tn5 dimerisation domain HRE53_29095 PF14706 Transposase DNA-binding HRE53_29095 PF01609 Transposase DDE domain HRE53_29115 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB HRE53_29115 PF08448 PAS fold HRE53_29115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_29115 PF00672 HAMP domain HRE53_29115 PF00512 His Kinase A (phospho-acceptor) domain HRE53_29145 PF13683 Integrase core domain HRE53_29145 PF01610 Transposase HRE53_29155 PF00072 Response regulator receiver domain HRE53_29160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_29160 PF00512 His Kinase A (phospho-acceptor) domain HRE53_29160 PF09308 LuxQ, periplasmic HRE53_29160 PF00072 Response regulator receiver domain HRE53_29175 PF00291 Pyridoxal-phosphate dependent enzyme HRE53_29220 PF00343 Carbohydrate phosphorylase HRE53_29225 PF03707 Bacterial signalling protein N terminal repeat HRE53_29225 PF00990 Diguanylate cyclase, GGDEF domain HRE53_29225 PF00563 EAL domain HRE53_29240 PF00072 Response regulator receiver domain HRE53_29240 PF01627 Hpt domain HRE53_29240 PF00512 His Kinase A (phospho-acceptor) domain HRE53_29240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_29250 PF01381 Helix-turn-helix HRE53_29285 PF00114 Pilin (bacterial filament) HRE53_29285 PF07963 Prokaryotic N-terminal methylation motif HRE53_29295 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) HRE53_29295 PF00722 Glycosyl hydrolases family 16 HRE53_29300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_29300 PF00512 His Kinase A (phospho-acceptor) domain HRE53_29300 PF00989 PAS fold HRE53_29300 PF16736 Single Cache-like HRE53_29305 PF00072 Response regulator receiver domain HRE53_29305 PF00486 Transcriptional regulatory protein, C terminal HRE53_29315 PF00873 AcrB/AcrD/AcrF family HRE53_29330 PF00989 PAS fold HRE53_29330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRE53_29330 PF16736 Single Cache-like HRE53_29330 PF00512 His Kinase A (phospho-acceptor) domain HRE53_29335 PF00486 Transcriptional regulatory protein, C terminal HRE53_29335 PF00072 Response regulator receiver domain HRE53_29340 PF13411 MerR HTH family regulatory protein HRE53_29360 PF00873 AcrB/AcrD/AcrF family HRE53_29365 PF00589 Phage integrase family HRE53_29365 PF02899 Phage integrase, N-terminal SAM-like domain HRE53_29375 PF00485 Phosphoribulokinase / Uridine kinase family HRE53_29380 PF13614 AAA domain HRE53_29385 PF02195 ParB-like nuclease domain HRE53_29400 PF00072 Response regulator receiver domain HRE53_29550 PF00216 Bacterial DNA-binding protein HRE53_29565 PF01740 STAS domain HRE53_29590 PF00216 Bacterial DNA-binding protein HRE53_29600 PF00140 Sigma-70 factor, region 1.2 HRE53_29600 PF04545 Sigma-70, region 4 HRE53_29600 PF04539 Sigma-70 region 3 HRE53_29600 PF04542 Sigma-70 region 2 HRE53_29600 PF03979 Sigma-70 factor, region 1.1 HRE53_29665 PF18340 DNA relaxase TraI 2B/2B-like domain HRE53_29665 PF08751 TrwC relaxase HRE53_29665 PF18272 single-stranded DNA binding TraI N-terminal subdomain HRE53_29665 PF07057 DNA helicase TraI HRE53_29785 PF01209 ubiE/COQ5 methyltransferase family HRE53_29795 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) HRE53_29840 PF00684 DnaJ central domain HRE53_29840 PF00226 DnaJ domain HRE53_29840 PF01556 DnaJ C terminal domain HRE53_29845 PF01025 GrpE HRE53_29865 PF00072 Response regulator receiver domain HRE53_29865 PF00486 Transcriptional regulatory protein, C terminal HRE53_29910 PF06150 ChaB HRE53_29935 PF17876 Cold shock domain HRE53_29935 PF08206 Ribonuclease B OB domain HRE53_29935 PF08461 Ribonuclease R winged-helix domain HRE53_29935 PF00575 S1 RNA binding domain HRE53_29935 PF00773 RNB domain HRE53_29980 PF13676 TIR domain HRE53_29995 PF02899 Phage integrase, N-terminal SAM-like domain HRE53_29995 PF00589 Phage integrase family HRE53_30000 PF12894 Anaphase-promoting complex subunit 4 WD40 domain HRE53_30000 PF00400 WD domain, G-beta repeat HRE53_30030 PF12894 Anaphase-promoting complex subunit 4 WD40 domain HRE53_30030 PF00400 WD domain, G-beta repeat HRE53_30055 PF00400 WD domain, G-beta repeat HRE53_30075 PF00589 Phage integrase family HRE53_30075 PF02899 Phage integrase, N-terminal SAM-like domain HRE53_30080 PF12894 Anaphase-promoting complex subunit 4 WD40 domain HRE53_30080 PF00400 WD domain, G-beta repeat HRE53_30150 PF00436 Single-strand binding protein family HRE53_30235 PF02899 Phage integrase, N-terminal SAM-like domain HRE53_30235 PF00589 Phage integrase family HRE53_30345 PF01381 Helix-turn-helix HRE53_30355 PF00486 Transcriptional regulatory protein, C terminal HRE53_30355 PF00931 NB-ARC domain HRE53_30355 PF03704 Bacterial transcriptional activator domain HRE53_30380 PF08401 Domain of unknown function (DUF1738) HRE53_30380 PF18818 Metallopeptidase superfamily domain HRE53_30405 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB HRE53_30410 PF01381 Helix-turn-helix HRE53_30470 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HRE53_30470 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HRE53_30485 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HRE53_30485 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HRE53_30495 PF00535 Glycosyl transferase family 2 HRE53_30535 PF01551 Peptidase family M23 HRE53_30535 PF04225 Opacity-associated protein A LysM-like domain HRE53_30600 PF04545 Sigma-70, region 4 HRE53_30600 PF04539 Sigma-70 region 3 HRE53_30600 PF04542 Sigma-70 region 2 HRE53_30600 PF00140 Sigma-70 factor, region 1.2 HRE53_30600 PF03979 Sigma-70 factor, region 1.1 HRE53_30615 PF00069 Protein kinase domain HRE53_30615 PF03793 PASTA domain HRE53_30635 PF01494 FAD binding domain HRE53_30680 PF00936 BMC domain HRE53_30700 PF02195 ParB-like nuclease domain HRE53_30700 PF17762 HTH domain found in ParB protein HRE53_30790 PF00872 Transposase, Mutator family HRE53_30805 PF01381 Helix-turn-helix HRE53_30870 PF13291 ACT domain HRE53_30870 PF04607 Region found in RelA / SpoT proteins HRE53_30870 PF02824 TGS domain HRE53_30920 PF01522 Polysaccharide deacetylase HRE53_30925 PF01609 Transposase DDE domain HRE53_30925 PF13808 DDE_Tnp_1-associated HRE53_31030 PF00069 Protein kinase domain HRE53_31030 PF00805 Pentapeptide repeats (8 copies) HRE53_31110 PF12102 Domain of unknown function (DUF3578) HRE53_31110 PF07728 AAA domain (dynein-related subfamily) HRE53_31125 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) HRE53_31125 PF11867 Domain of unknown function (DUF3387) HRE53_31125 PF18766 SWI2/SNF2 ATPase HRE53_31140 PF12161 HsdM N-terminal domain HRE53_31140 PF02384 N-6 DNA Methylase HRE53_31180 PF01381 Helix-turn-helix HRE53_31250 PF01695 IstB-like ATP binding protein HRE53_31255 PF00665 Integrase core domain HRE53_31290 PF13614 AAA domain HRE53_31295 PF02195 ParB-like nuclease domain HRE53_31320 PF00565 Staphylococcal nuclease homologue HRE53_31340 PF01494 FAD binding domain HRE53_31360 PF08479 POTRA domain, ShlB-type HRE53_31360 PF17287 POTRA domain HRE53_31360 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB HRE53_31375 PF03793 PASTA domain HRE53_31375 PF00069 Protein kinase domain HRE53_31545 PF01381 Helix-turn-helix HRE53_31570 PF10609 NUBPL iron-transfer P-loop NTPase HRE53_31600 PF01966 HD domain HRE53_31620 PF00140 Sigma-70 factor, region 1.2 HRE53_31620 PF04542 Sigma-70 region 2 HRE53_31620 PF04539 Sigma-70 region 3 HRE53_31620 PF04545 Sigma-70, region 4 HRE53_31625 PF00762 Ferrochelatase HRE53_31630 PF00762 Ferrochelatase HRE53_31655 PF03992 Antibiotic biosynthesis monooxygenase HRE53_31660 PF00440 Bacterial regulatory proteins, tetR family HRE53_31690 PF13676 TIR domain HRE53_31780 PF04472 Cell division protein SepF HRE53_31790 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) HRE53_31795 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) HRE53_31800 PF07724 AAA domain (Cdc48 subfamily) HRE53_31800 PF10431 C-terminal, D2-small domain, of ClpB protein HRE53_31800 PF02861 Clp amino terminal domain, pathogenicity island component HRE53_31800 PF17871 AAA lid domain HRE53_31800 PF00004 ATPase family associated with various cellular activities (AAA) HRE53_31810 PF04542 Sigma-70 region 2 HRE53_31810 PF04539 Sigma-70 region 3 HRE53_31810 PF04545 Sigma-70, region 4 HRE53_31810 PF03979 Sigma-70 factor, region 1.1 HRE53_31810 PF00140 Sigma-70 factor, region 1.2 HRE53_31980 PF00805 Pentapeptide repeats (8 copies) HRE53_31980 PF00069 Protein kinase domain HRE53_32025 PF01381 Helix-turn-helix HRE53_32030 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB HRE53_32060 PF01610 Transposase HRE53_32060 PF13683 Integrase core domain HRE53_32075 PF01695 IstB-like ATP binding protein HRE53_32095 PF00069 Protein kinase domain HRE53_32095 PF03781 Sulfatase-modifying factor enzyme 1 HRE53_32105 PF01695 IstB-like ATP binding protein HRE53_32165 PF00872 Transposase, Mutator family HRE53_32200 PF00872 Transposase, Mutator family HRE53_32210 PF01695 IstB-like ATP binding protein HRE53_32215 PF00665 Integrase core domain HRE53_32220 PF00665 Integrase core domain HRE53_32225 PF01339 CheB methylesterase HRE53_32225 PF00072 Response regulator receiver domain HRE53_32265 PF00154 recA bacterial DNA recombination protein HRE53_32275 PF00575 S1 RNA binding domain HRE53_32275 PF00773 RNB domain HRE53_32275 PF17876 Cold shock domain HRE53_32275 PF08461 Ribonuclease R winged-helix domain HRE53_32275 PF08206 Ribonuclease B OB domain HRE53_32350 PF01209 ubiE/COQ5 methyltransferase family HRE53_32365 PF01381 Helix-turn-helix HRE53_32525 PF01695 IstB-like ATP binding protein HRE53_32550 PF00400 WD domain, G-beta repeat HRE53_32550 PF00931 NB-ARC domain HRE53_32555 PF00931 NB-ARC domain HRE53_32555 PF00400 WD domain, G-beta repeat HRE53_32560 PF00931 NB-ARC domain HRE53_32560 PF00400 WD domain, G-beta repeat HRE53_32620 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) HRE53_32660 PF00535 Glycosyl transferase family 2 HRE53_32670 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HRE53_32670 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HRE53_32820 PF01610 Transposase HRE53_32820 PF13683 Integrase core domain HRE53_32865 PF13614 AAA domain HRE53_32885 PF03781 Sulfatase-modifying factor enzyme 1 HRE53_32935 PF08479 POTRA domain, ShlB-type HRE53_32935 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB HRE53_32935 PF17287 POTRA domain HRE53_32950 PF00069 Protein kinase domain HRE53_32965 PF00140 Sigma-70 factor, region 1.2 HRE53_32965 PF04542 Sigma-70 region 2 HRE53_32965 PF04539 Sigma-70 region 3 HRE53_32965 PF04545 Sigma-70, region 4 HRE53_33005 PF04542 Sigma-70 region 2 HRE53_33005 PF04539 Sigma-70 region 3 HRE53_33005 PF04545 Sigma-70, region 4 HRE53_33055 PF04225 Opacity-associated protein A LysM-like domain HRE53_33055 PF01551 Peptidase family M23 HRE53_33130 PF13614 AAA domain HRE53_33220 PF00082 Subtilase family HRE53_33220 PF04151 Bacterial pre-peptidase C-terminal domain HRE53_33275 PF00872 Transposase, Mutator family