locus-tag class description Clocl_0001 IPR003593 AAA+ ATPase domain Clocl_0001 IPR001957 Chromosomal replication control, initiator DnaA Clocl_0001 IPR020591 Chromosomal replication control, initiator DnaA-like Clocl_0001 IPR018312 Chromosomal replication control, initiator DnaA, conserved site Clocl_0001 IPR013317 Chromosomal replication initiator protein DnaA Clocl_0001 IPR013159 Chromosomal replication initiator, DnaA C-terminal Clocl_0001 IPR024633 DnaA N-terminal domain Clocl_0001 IPR038454 DnaA, N-terminal domain superfamily Clocl_0001 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0001 IPR010921 Trp repressor/replication initiator Clocl_0002 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal Clocl_0002 IPR022637 DNA polymerase III, beta sliding clamp, central Clocl_0002 IPR001001 DNA polymerase III, beta sliding clamp Clocl_0002 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal Clocl_0004 IPR001238 DNA-binding, RecF Clocl_0004 IPR018078 DNA-binding, RecF, conserved site Clocl_0004 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0004 IPR003395 RecF/RecN/SMC, N-terminal Clocl_0004 IPR042174 DNA-binding RecF, domain 2 Clocl_0006 IPR013760 DNA topoisomerase, type IIA-like domain superfamily Clocl_0006 IPR034160 DNA gyrase subunit B, TOPRIM domain Clocl_0006 IPR006171 TOPRIM domain Clocl_0006 IPR018522 DNA topoisomerase, type IIA, conserved site Clocl_0006 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal Clocl_0006 IPR001241 DNA topoisomerase, type IIA Clocl_0006 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 Clocl_0006 IPR020568 Ribosomal protein S5 domain 2-type fold Clocl_0006 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clocl_0006 IPR003594 Histidine kinase/HSP90-like ATPase Clocl_0006 IPR011557 DNA gyrase, subunit B Clocl_0006 IPR002288 DNA gyrase B subunit, C-terminal Clocl_0006 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Clocl_0007 IPR025669 AAA domain Clocl_0007 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0008 IPR041468 ParB/Spo0J, HTH domain Clocl_0008 IPR004437 ParB/RepB/Spo0J partition protein Clocl_0008 IPR003115 ParB/Sulfiredoxin Clocl_0008 IPR036086 ParB/Sulfiredoxin superfamily Clocl_0011 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm Clocl_0011 IPR033729 Serine-tRNA ligase catalytic core domain Clocl_0011 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily Clocl_0011 IPR015866 Serine-tRNA synthetase, type1, N-terminal Clocl_0011 IPR006195 Aminoacyl-tRNA synthetase, class II Clocl_0011 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) Clocl_0011 IPR002317 Serine-tRNA ligase, type1 Clocl_0014 IPR004812 Drug resistance transporter Bcr/CmlA subfamily Clocl_0014 IPR011701 Major facilitator superfamily Clocl_0014 IPR020846 Major facilitator superfamily domain Clocl_0014 IPR036259 MFS transporter superfamily Clocl_0014 IPR005829 Sugar transporter, conserved site Clocl_0015 IPR028261 Dihydroprymidine dehydrogenase domain II Clocl_0015 IPR036188 FAD/NAD(P)-binding domain superfamily Clocl_0015 IPR023753 FAD/NAD(P)-binding domain Clocl_0015 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 Clocl_0015 IPR009051 Alpha-helical ferredoxin Clocl_0016 IPR002932 Glutamate synthase domain Clocl_0016 IPR029055 Nucleophile aminohydrolases, N-terminal Clocl_0016 IPR006982 Glutamate synthase, central-N Clocl_0016 IPR013785 Aldolase-type TIM barrel Clocl_0016 IPR002489 Glutamate synthase, alpha subunit, C-terminal Clocl_0016 IPR017932 Glutamine amidotransferase type 2 domain Clocl_0016 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily Clocl_0018 IPR001119 S-layer homology domain Clocl_0020 IPR007391 Vancomycin resistance VanW Clocl_0023 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II Clocl_0023 IPR029061 Thiamin diphosphate-binding fold Clocl_0023 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain Clocl_0023 IPR011895 Pyruvate-flavodoxin oxidoreductase Clocl_0023 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal Clocl_0023 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain Clocl_0023 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding Clocl_0023 IPR037112 Pyruvate-flavodoxin oxidoreductase, EKR domain superfamily Clocl_0023 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II Clocl_0023 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clocl_0023 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clocl_0023 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain Clocl_0028 IPR014255 Spore coat protein CotS Clocl_0028 IPR011009 Protein kinase-like domain superfamily Clocl_0028 IPR002575 Aminoglycoside phosphotransferase Clocl_0029 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0029 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site Clocl_0029 IPR000559 Formate-tetrahydrofolate ligase, FTHFS Clocl_0034 IPR020568 Ribosomal protein S5 domain 2-type fold Clocl_0034 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase Clocl_0034 IPR006204 GHMP kinase N-terminal domain Clocl_0034 IPR036554 GHMP kinase, C-terminal domain superfamily Clocl_0034 IPR013750 GHMP kinase, C-terminal domain Clocl_0034 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Clocl_0035 IPR000485 AsnC-type HTH domain Clocl_0035 IPR008920 Transcription regulator FadR/GntR, C-terminal Clocl_0035 IPR000524 Transcription regulator HTH, GntR Clocl_0035 IPR036390 Winged helix DNA-binding domain superfamily Clocl_0035 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_0035 IPR011711 GntR, C-terminal Clocl_0036 IPR006122 Heavy metal-associated domain, copper ion-binding Clocl_0036 IPR000428 Copper ion binding protein Clocl_0036 IPR036163 Heavy metal-associated domain superfamily Clocl_0036 IPR017969 Heavy-metal-associated, conserved site Clocl_0036 IPR006121 Heavy metal-associated domain, HMA Clocl_0037 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type Clocl_0037 IPR035909 Methylesterase CheB, C-terminal Clocl_0037 IPR011006 CheY-like superfamily Clocl_0037 IPR001789 Signal transduction response regulator, receiver domain Clocl_0037 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase Clocl_0038 IPR003593 AAA+ ATPase domain Clocl_0038 IPR041569 AAA ATPase, AAA+ lid domain Clocl_0038 IPR003959 ATPase, AAA-type, core Clocl_0038 IPR003960 ATPase, AAA-type, conserved site Clocl_0038 IPR005936 Peptidase, FtsH Clocl_0038 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0038 IPR000642 Peptidase M41 Clocl_0038 IPR037219 Peptidase M41-like Clocl_0042 IPR029052 Metallo-dependent phosphatase-like Clocl_0042 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain Clocl_0042 IPR004593 Nuclease SbcCD subunit D Clocl_0042 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type Clocl_0051 IPR002881 Domain of unknown function DUF58 Clocl_0051 IPR036465 von Willebrand factor A-like domain superfamily Clocl_0052 IPR041628 ChlI/MoxR, AAA lid domain Clocl_0052 IPR011703 ATPase, AAA-3 Clocl_0052 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0053 IPR009695 Diacylglycerol glucosyltransferase, N-terminal Clocl_0053 IPR023589 Processive diacylglycerol beta-glucosyltransferase Clocl_0053 IPR001296 Glycosyl transferase, family 1 Clocl_0054 IPR042047 Cell wall hydrolase SleB, domain 1 Clocl_0054 IPR036366 PGBD superfamily Clocl_0054 IPR002477 Peptidoglycan binding-like Clocl_0054 IPR011105 Cell wall hydrolase, SleB Clocl_0054 IPR014224 Spore cortex-lytic enzyme SleB Clocl_0054 IPR036365 PGBD-like superfamily Clocl_0055 IPR014239 Spore germination YpeB Clocl_0057 IPR018312 Chromosomal replication control, initiator DnaA, conserved site Clocl_0057 IPR003593 AAA+ ATPase domain Clocl_0057 IPR001957 Chromosomal replication control, initiator DnaA Clocl_0057 IPR013317 Chromosomal replication initiator protein DnaA Clocl_0057 IPR020591 Chromosomal replication control, initiator DnaA-like Clocl_0057 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0057 IPR038454 DnaA, N-terminal domain superfamily Clocl_0057 IPR024633 DnaA N-terminal domain Clocl_0057 IPR013159 Chromosomal replication initiator, DnaA C-terminal Clocl_0057 IPR010921 Trp repressor/replication initiator Clocl_0061 IPR000540 Flagellar motor protein MotA, conserved site Clocl_0061 IPR002898 MotA/TolQ/ExbB proton channel Clocl_0062 IPR025713 Motility protein B, N-terminal domain Clocl_0062 IPR006665 OmpA-like domain Clocl_0062 IPR036737 OmpA-like domain superfamily Clocl_0063 IPR010787 Protein of unknown function DUF1385 Clocl_0064 IPR002052 DNA methylase, N-6 adenine-specific, conserved site Clocl_0064 IPR004556 Methyltransferase HemK-like Clocl_0064 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific Clocl_0064 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clocl_0064 IPR007848 Methyltransferase small domain Clocl_0064 IPR040758 Release factor glutamine methyltransferase, N-terminal domain Clocl_0065 IPR014227 Putative transport protein YtvI-like Clocl_0065 IPR002549 Transmembrane protein TqsA-like Clocl_0066 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clocl_0066 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC Clocl_0066 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Clocl_0066 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Clocl_0066 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clocl_0066 IPR026902 RnfC Barrel sandwich hybrid domain Clocl_0066 IPR019554 Soluble ligand binding domain Clocl_0066 IPR009051 Alpha-helical ferredoxin Clocl_0067 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD Clocl_0067 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D Clocl_0068 IPR007329 FMN-binding Clocl_0068 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG Clocl_0069 IPR003667 NqrDE/RnfAE Clocl_0069 IPR010968 Ion-translocating oxidoreductase complex subunit E Clocl_0070 IPR003667 NqrDE/RnfAE Clocl_0070 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA Clocl_0071 IPR007202 4Fe-4S domain Clocl_0071 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clocl_0071 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clocl_0071 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB Clocl_0071 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria Clocl_0073 IPR000623 Shikimate kinase/Threonine synthase-like 1 Clocl_0073 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0073 IPR031322 Shikimate kinase/gluconokinase Clocl_0074 IPR006710 Glycoside hydrolase, family 43 Clocl_0074 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Clocl_0075 IPR000787 Peptidase M29 Clocl_0075 IPR035097 Peptidase M29, N-terminal Clocl_0076 IPR004438 Peptidase M3B, oligoendopeptidase F Clocl_0076 IPR001567 Peptidase M3A/M3B catalytic domain Clocl_0076 IPR042088 Oligoendopeptidase F, C-terminal domain Clocl_0076 IPR013647 Oligopeptidase F, N-terminal domain Clocl_0079 IPR028261 Dihydroprymidine dehydrogenase domain II Clocl_0079 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clocl_0079 IPR023753 FAD/NAD(P)-binding domain Clocl_0079 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clocl_0079 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 Clocl_0079 IPR009051 Alpha-helical ferredoxin Clocl_0079 IPR036188 FAD/NAD(P)-binding domain superfamily Clocl_0080 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit Clocl_0080 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain Clocl_0080 IPR017927 FAD-binding domain, ferredoxin reductase-type Clocl_0080 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Clocl_0080 IPR001433 Oxidoreductase FAD/NAD(P)-binding Clocl_0080 IPR017938 Riboflavin synthase-like beta-barrel Clocl_0082 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase Clocl_0082 IPR033524 Leu/Phe/Val dehydrogenases active site Clocl_0082 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal Clocl_0082 IPR014362 Glutamate dehydrogenase Clocl_0082 IPR036291 NAD(P)-binding domain superfamily Clocl_0082 IPR033922 NAD(P) binding domain of glutamate dehydrogenase Clocl_0082 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain Clocl_0085 IPR016192 APOBEC/CMP deaminase, zinc-binding Clocl_0085 IPR002125 Cytidine and deoxycytidylate deaminase domain Clocl_0085 IPR016193 Cytidine deaminase-like Clocl_0085 IPR028883 tRNA-specific adenosine deaminase Clocl_0087 IPR002528 Multi antimicrobial extrusion protein Clocl_0088 IPR007934 Alpha-L-arabinofuranosidase B, arabinose-binding domain Clocl_0088 IPR024449 Anti-sigma factor RsgI, N-terminal Clocl_0088 IPR036195 Alpha-L-arabinofuranosidase B, arabinose-binding domain superfamily Clocl_0093 IPR007159 SpoVT-AbrB domain Clocl_0093 IPR040678 AbrB, C-terminal Clocl_0093 IPR037914 SpoVT-AbrB domain superfamily Clocl_0107 IPR002699 ATPase, V1 complex, subunit D Clocl_0108 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site Clocl_0108 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain Clocl_0108 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0108 IPR022879 V-type ATP synthase regulatory subunit B/beta Clocl_0108 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain Clocl_0109 IPR031686 ATPsynthase alpha/beta subunit, N-terminal extension Clocl_0109 IPR022878 V-type ATP synthase catalytic alpha chain Clocl_0109 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily Clocl_0109 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal Clocl_0109 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain Clocl_0109 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily Clocl_0109 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain Clocl_0109 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site Clocl_0109 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0110 IPR008218 ATPase, V1 complex, subunit F Clocl_0110 IPR036906 ATPase, V1 complex, subunit F superfamily Clocl_0110 IPR022944 ATPase, V1 complex, subunit F, bacterial/archaeal Clocl_0112 IPR038495 V-type ATPase subunit E, C-terminal domain superfamily Clocl_0112 IPR002842 V-type ATPase subunit E Clocl_0113 IPR000245 V-ATPase proteolipid subunit Clocl_0113 IPR035921 F/V-ATP synthase subunit C superfamily Clocl_0113 IPR002379 V-ATPase proteolipid subunit C-like domain Clocl_0114 IPR002490 V-type ATPase, V0 complex, 116kDa subunit family Clocl_0117 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA Clocl_0117 IPR016161 Aldehyde/histidinol dehydrogenase Clocl_0117 IPR016163 Aldehyde dehydrogenase, C-terminal Clocl_0117 IPR015590 Aldehyde dehydrogenase domain Clocl_0117 IPR016162 Aldehyde dehydrogenase, N-terminal Clocl_0117 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase Clocl_0117 IPR018211 Alcohol dehydrogenase, iron-type, conserved site Clocl_0117 IPR039697 Iron-type alcohol dehydrogenase-like Clocl_0117 IPR034789 Bifunctional aldehyde-alcohol dehydrogenase, C-terminal domain Clocl_0118 IPR002549 Transmembrane protein TqsA-like Clocl_0120 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase Clocl_0120 IPR036263 Chorismate mutase type II superfamily Clocl_0120 IPR036979 Chorismate mutase domain superfamily Clocl_0120 IPR002701 Chorismate mutase II, prokaryotic-type Clocl_0120 IPR001086 Prephenate dehydratase Clocl_0120 IPR018528 Prephenate dehydratase, conserved site Clocl_0120 IPR002912 ACT domain Clocl_0122 IPR001667 DDH domain Clocl_0122 IPR014528 Cyclic-di-AMP phosphodiesterase GdpP/PdeA Clocl_0122 IPR000160 GGDEF domain Clocl_0122 IPR038763 DHH phosphoesterase superfamily Clocl_0122 IPR003156 DHHA1 domain Clocl_0123 IPR036791 Ribosomal protein L9, C-terminal domain superfamily Clocl_0123 IPR000244 Ribosomal protein L9 Clocl_0123 IPR009027 Ribosomal protein L9/RNase H1, N-terminal Clocl_0123 IPR020594 Ribosomal protein L9, bacteria/chloroplast Clocl_0123 IPR020069 Ribosomal protein L9, C-terminal Clocl_0123 IPR020070 Ribosomal protein L9, N-terminal Clocl_0123 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Clocl_0124 IPR003593 AAA+ ATPase domain Clocl_0124 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily Clocl_0124 IPR007692 DNA helicase, DnaB type Clocl_0124 IPR007693 DNA helicase, DnaB-like, N-terminal Clocl_0124 IPR007694 DNA helicase, DnaB-like, C-terminal Clocl_0124 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0124 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal Clocl_0125 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal Clocl_0125 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clocl_0125 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Clocl_0125 IPR012094 tRNA(Ile)-lysidine synthase Clocl_0125 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal Clocl_0126 IPR005904 Hypoxanthine phosphoribosyl transferase Clocl_0126 IPR000836 Phosphoribosyltransferase domain Clocl_0126 IPR029057 Phosphoribosyltransferase-like Clocl_0127 IPR011546 Peptidase M41, FtsH extracellular Clocl_0127 IPR037219 Peptidase M41-like Clocl_0127 IPR000642 Peptidase M41 Clocl_0127 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0127 IPR041569 AAA ATPase, AAA+ lid domain Clocl_0127 IPR003960 ATPase, AAA-type, conserved site Clocl_0127 IPR003959 ATPase, AAA-type, core Clocl_0127 IPR005936 Peptidase, FtsH Clocl_0127 IPR003593 AAA+ ATPase domain Clocl_0128 IPR025540 Fluoroacetyl-CoA thioesterase Clocl_0128 IPR029069 HotDog domain superfamily Clocl_0130 IPR022628 S-adenosylmethionine synthetase, N-terminal Clocl_0130 IPR022631 S-adenosylmethionine synthetase, conserved site Clocl_0130 IPR022630 S-adenosylmethionine synthetase, C-terminal Clocl_0130 IPR022629 S-adenosylmethionine synthetase, central domain Clocl_0130 IPR002133 S-adenosylmethionine synthetase Clocl_0130 IPR022636 S-adenosylmethionine synthetase superfamily Clocl_0134 IPR003593 AAA+ ATPase domain Clocl_0134 IPR006345 RecD-like DNA helicase Clocl_0134 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0134 IPR029493 RecD helicase-like helix-hairpin-helix domain Clocl_0134 IPR041451 RecD-like DNA helicase, SH3 domain Clocl_0134 IPR027785 UvrD-like helicase C-terminal domain Clocl_0137 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0137 IPR012763 DNA polymerase III, subunit gamma/ tau Clocl_0137 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal Clocl_0137 IPR001270 ClpA/B family Clocl_0137 IPR003593 AAA+ ATPase domain Clocl_0137 IPR022754 DNA polymerase III, gamma subunit, domain III Clocl_0138 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily Clocl_0138 IPR004401 Nucleoid-associated protein YbaB/EbfC family Clocl_0139 IPR034137 RecR, TOPRIM domain Clocl_0139 IPR015967 Recombination protein RecR, conserved site Clocl_0139 IPR006171 TOPRIM domain Clocl_0139 IPR023627 Recombination protein RecR Clocl_0139 IPR000093 DNA recombination protein RecR Clocl_0139 IPR023628 Recombination protein RecR, C4-type zinc finger Clocl_0142 IPR025714 Methyltransferase domain Clocl_0142 IPR005271 Carboxy-S-adenosyl-L-methionine synthase Clocl_0142 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clocl_0149 IPR010017 tRNA U34 carboxymethyltransferase Clocl_0149 IPR027555 tRNA (mo5U34)-methyltransferase-like Clocl_0149 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clocl_0154 IPR011991 ArsR-like helix-turn-helix domain Clocl_0154 IPR018334 ArsR-type transcription regulator, HTH motif Clocl_0154 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_0154 IPR036390 Winged helix DNA-binding domain superfamily Clocl_0154 IPR001845 HTH ArsR-type DNA-binding domain Clocl_0155 IPR004706 Arsenical-resistance protein Acr3 Clocl_0155 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 Clocl_0155 IPR038770 Sodium/solute symporter superfamily Clocl_0156 IPR014064 Arsenate reductase ArsC Clocl_0156 IPR023485 Phosphotyrosine protein phosphatase I Clocl_0156 IPR036196 Phosphotyrosine protein phosphatase I superfamily Clocl_0165 IPR000808 Mrp, conserved site Clocl_0165 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0165 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 Clocl_0165 IPR019591 Mrp/NBP35 ATP-binding protein Clocl_0167 IPR019591 Mrp/NBP35 ATP-binding protein Clocl_0167 IPR000808 Mrp, conserved site Clocl_0167 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0167 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 Clocl_0170 IPR002481 Ferric-uptake regulator Clocl_0170 IPR036390 Winged helix DNA-binding domain superfamily Clocl_0170 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_0171 IPR013324 RNA polymerase sigma factor, region 3/4-like Clocl_0171 IPR002852 Uncharacterised protein family UPF0251 Clocl_0171 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_0181 IPR029787 Nucleotide cyclase Clocl_0181 IPR039435 Diguanylate cyclase DosC, globin sensor domain Clocl_0181 IPR000160 GGDEF domain Clocl_0181 IPR009050 Globin-like superfamily Clocl_0181 IPR012292 Globin/Protoglobin Clocl_0184 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA Clocl_0184 IPR000477 Reverse transcriptase domain Clocl_0189 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily Clocl_0189 IPR003356 DNA methylase, adenine-specific Clocl_0189 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clocl_0190 IPR000055 Restriction endonuclease, type I, HsdS Clocl_0191 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal Clocl_0191 IPR021810 Protein of unknown function DUF3387 Clocl_0191 IPR014001 Helicase superfamily 1/2, ATP-binding domain Clocl_0191 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0191 IPR004473 Restriction endonuclease, type I, HsdR Clocl_0191 IPR040980 SWI2/SNF2 ATPase Clocl_0192 IPR036705 ADP-ribosylation/Crystallin J1 superfamily Clocl_0192 IPR005502 ADP-ribosylation/Crystallin J1 Clocl_0197 IPR041471 UvrB, interaction domain Clocl_0197 IPR024759 UvrB, YAD/RRR-motif-containing domain Clocl_0197 IPR004807 UvrABC system, subunit B Clocl_0197 IPR036876 UVR domain superfamily Clocl_0197 IPR001943 UVR domain Clocl_0197 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0197 IPR001650 Helicase, C-terminal Clocl_0197 IPR006935 Helicase/UvrB, N-terminal Clocl_0197 IPR014001 Helicase superfamily 1/2, ATP-binding domain Clocl_0203 IPR011010 DNA breaking-rejoining enzyme, catalytic core Clocl_0203 IPR002104 Integrase, catalytic domain Clocl_0203 IPR010998 Integrase/recombinase, N-terminal Clocl_0203 IPR023009 Tyrosine recombinase XerC/XerD Clocl_0203 IPR013762 Integrase-like, catalytic domain superfamily Clocl_0203 IPR011931 Tyrosine recombinase XerC Clocl_0203 IPR004107 Integrase, SAM-like, N-terminal Clocl_0209 IPR036390 Winged helix DNA-binding domain superfamily Clocl_0209 IPR014833 TnsA endonuclease, N-terminal Clocl_0209 IPR014832 TnsA endonuclease C-terminal Clocl_0209 IPR011335 Restriction endonuclease type II-like Clocl_0209 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_0209 IPR011856 tRNA endonuclease-like domain superfamily Clocl_0210 IPR012337 Ribonuclease H-like superfamily Clocl_0210 IPR001584 Integrase, catalytic core Clocl_0210 IPR036397 Ribonuclease H superfamily Clocl_0211 IPR021542 Tn7 transposition regulator TnsC Clocl_0211 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0211 IPR003593 AAA+ ATPase domain Clocl_0227 IPR036196 Phosphotyrosine protein phosphatase I superfamily Clocl_0227 IPR023485 Phosphotyrosine protein phosphatase I Clocl_0227 IPR014062 Arsenate reductase, glutathione/glutaredoxin type Clocl_0228 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_0228 IPR036390 Winged helix DNA-binding domain superfamily Clocl_0228 IPR011991 ArsR-like helix-turn-helix domain Clocl_0228 IPR018334 ArsR-type transcription regulator, HTH motif Clocl_0228 IPR001845 HTH ArsR-type DNA-binding domain Clocl_0234 IPR010017 tRNA U34 carboxymethyltransferase Clocl_0234 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clocl_0234 IPR027555 tRNA (mo5U34)-methyltransferase-like Clocl_0247 IPR039435 Diguanylate cyclase DosC, globin sensor domain Clocl_0247 IPR009050 Globin-like superfamily Clocl_0247 IPR012292 Globin/Protoglobin Clocl_0247 IPR029787 Nucleotide cyclase Clocl_0247 IPR000160 GGDEF domain Clocl_0258 IPR005502 ADP-ribosylation/Crystallin J1 Clocl_0258 IPR036705 ADP-ribosylation/Crystallin J1 superfamily Clocl_0263 IPR035569 Antitoxin epsilon/PezA domain superfamily Clocl_0263 IPR001387 Cro/C1-type helix-turn-helix domain Clocl_0263 IPR010982 Lambda repressor-like, DNA-binding domain superfamily Clocl_0268 IPR011931 Tyrosine recombinase XerC Clocl_0268 IPR004107 Integrase, SAM-like, N-terminal Clocl_0268 IPR010998 Integrase/recombinase, N-terminal Clocl_0268 IPR011010 DNA breaking-rejoining enzyme, catalytic core Clocl_0268 IPR023009 Tyrosine recombinase XerC/XerD Clocl_0268 IPR013762 Integrase-like, catalytic domain superfamily Clocl_0268 IPR002104 Integrase, catalytic domain Clocl_0276 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_0276 IPR011335 Restriction endonuclease type II-like Clocl_0276 IPR014832 TnsA endonuclease C-terminal Clocl_0276 IPR036390 Winged helix DNA-binding domain superfamily Clocl_0276 IPR011856 tRNA endonuclease-like domain superfamily Clocl_0276 IPR014833 TnsA endonuclease, N-terminal Clocl_0277 IPR036397 Ribonuclease H superfamily Clocl_0277 IPR012337 Ribonuclease H-like superfamily Clocl_0277 IPR001584 Integrase, catalytic core Clocl_0278 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0278 IPR021542 Tn7 transposition regulator TnsC Clocl_0278 IPR003593 AAA+ ATPase domain Clocl_0280 IPR011545 DEAD/DEAH box helicase domain Clocl_0280 IPR012340 Nucleic acid-binding, OB-fold Clocl_0280 IPR014001 Helicase superfamily 1/2, ATP-binding domain Clocl_0280 IPR025831 ATP-dependent DNA helicase RecG, C-terminal domain Clocl_0280 IPR038475 RecG, C-terminal domain superfamily Clocl_0280 IPR033454 RecG, wedge domain Clocl_0280 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0282 IPR001119 S-layer homology domain Clocl_0282 IPR017853 Glycoside hydrolase superfamily Clocl_0282 IPR031158 Glycosyl hydrolases family 10, active site Clocl_0282 IPR001000 Glycoside hydrolase family 10 domain Clocl_0282 IPR008979 Galactose-binding-like domain superfamily Clocl_0282 IPR003305 Carbohydrate-binding, CenC-like Clocl_0282 IPR010502 Carbohydrate-binding domain, family 9 Clocl_0285 IPR004373 Peptide chain release factor 1 Clocl_0285 IPR000352 Peptide chain release factor class I Clocl_0285 IPR005139 Peptide chain release factor Clocl_0286 IPR003689 Zinc/iron permease Clocl_0286 IPR023498 Zinc transporter ZupT Clocl_0287 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Clocl_0287 IPR005145 Putative GTP-binding controlling metal-binding domain Clocl_0287 IPR038385 Threonylcarbamoyl-AMP synthase, C-terminal domain superfamily Clocl_0287 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 Clocl_0287 IPR006070 YrdC-like domain Clocl_0288 IPR017867 Protein-tyrosine phosphatase, low molecular weight Clocl_0288 IPR023485 Phosphotyrosine protein phosphatase I Clocl_0288 IPR036196 Phosphotyrosine protein phosphatase I superfamily Clocl_0289 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily Clocl_0289 IPR004785 Ribose 5-phosphate isomerase B Clocl_0289 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family Clocl_0290 IPR034332 Uracil phosphoribosyltransferase, bacterial-type Clocl_0290 IPR000836 Phosphoribosyltransferase domain Clocl_0290 IPR005765 Uracil phosphoribosyl transferase Clocl_0290 IPR029057 Phosphoribosyltransferase-like Clocl_0291 IPR016192 APOBEC/CMP deaminase, zinc-binding Clocl_0291 IPR002125 Cytidine and deoxycytidylate deaminase domain Clocl_0291 IPR013404 Competence operon E, ComEB Clocl_0291 IPR015517 Deoxycytidylate deaminase-related Clocl_0291 IPR035105 Deoxycytidylate deaminase domain Clocl_0291 IPR016193 Cytidine deaminase-like Clocl_0292 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site Clocl_0292 IPR000715 Glycosyl transferase, family 4 Clocl_0293 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Clocl_0293 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like Clocl_0295 IPR035908 ATP synthase, F0 complex, subunit A superfamily Clocl_0295 IPR000568 ATP synthase, F0 complex, subunit A Clocl_0295 IPR023011 ATP synthase, F0 complex, subunit A, active site Clocl_0296 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast Clocl_0296 IPR000454 ATP synthase, F0 complex, subunit C Clocl_0296 IPR035921 F/V-ATP synthase subunit C superfamily Clocl_0296 IPR002379 V-ATPase proteolipid subunit C-like domain Clocl_0296 IPR038662 F1F0 ATP synthase subunit C superfamily Clocl_0296 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Clocl_0297 IPR005864 ATP synthase, F0 complex, subunit b, bacterial Clocl_0297 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast Clocl_0297 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily Clocl_0298 IPR000711 ATPase, OSCP/delta subunit Clocl_0298 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Clocl_0299 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0299 IPR005294 ATP synthase, F1 complex, alpha subunit Clocl_0299 IPR000793 ATP synthase, alpha subunit, C-terminal Clocl_0299 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily Clocl_0299 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain Clocl_0299 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily Clocl_0299 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site Clocl_0299 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain Clocl_0299 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain Clocl_0299 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily Clocl_0300 IPR000131 ATP synthase, F1 complex, gamma subunit Clocl_0300 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily Clocl_0301 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0301 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal Clocl_0301 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain Clocl_0301 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site Clocl_0301 IPR005722 ATP synthase, F1 complex, beta subunit Clocl_0301 IPR003593 AAA+ ATPase domain Clocl_0301 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily Clocl_0301 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain Clocl_0302 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit Clocl_0302 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Clocl_0302 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal Clocl_0302 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Clocl_0302 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Clocl_0305 IPR002102 Cellulosome anchoring protein, cohesin domain Clocl_0305 IPR001119 S-layer homology domain Clocl_0305 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clocl_0307 IPR001986 Enolpyruvate transferase domain Clocl_0307 IPR036968 Enolpyruvate transferase domain superfamily Clocl_0307 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta Clocl_0307 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase Clocl_0308 IPR013486 Sporulation stage II protein D, amidase enhancer LytB Clocl_0308 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal Clocl_0308 IPR014225 Sporulation stage II, protein D firmicutes Clocl_0313 IPR018356 Transcription regulator, HTH DeoR-type, conserved site Clocl_0313 IPR014208 Sporulation stage III, transcriptional regulator SpoIIID Clocl_0314 IPR004753 Cell shape determining protein MreB Clocl_0315 IPR012834 Flagellar basal-body rod FlgG Clocl_0315 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like Clocl_0315 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Clocl_0315 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Clocl_0315 IPR019776 Flagellar basal body rod protein, conserved site Clocl_0315 IPR001444 Flagellar basal body rod protein, N-terminal Clocl_0316 IPR012834 Flagellar basal-body rod FlgG Clocl_0316 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like Clocl_0316 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Clocl_0316 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Clocl_0316 IPR019776 Flagellar basal body rod protein, conserved site Clocl_0316 IPR001444 Flagellar basal body rod protein, N-terminal Clocl_0318 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ Clocl_0318 IPR029069 HotDog domain superfamily Clocl_0318 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ Clocl_0319 IPR036565 Mur-like, catalytic domain superfamily Clocl_0319 IPR004101 Mur ligase, C-terminal Clocl_0319 IPR036615 Mur ligase, C-terminal domain superfamily Clocl_0319 IPR013221 Mur ligase, central Clocl_0319 IPR000713 Mur ligase, N-terminal catalytic domain Clocl_0319 IPR005758 UDP-N-acetylmuramate--L-alanine ligase Clocl_0320 IPR000836 Phosphoribosyltransferase domain Clocl_0320 IPR029057 Phosphoribosyltransferase-like Clocl_0320 IPR015265 Bacterial purine repressor, N-terminal Clocl_0320 IPR010078 Pur operon repressor Clocl_0320 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_0320 IPR036390 Winged helix DNA-binding domain superfamily Clocl_0321 IPR007170 Stage V sporulation protein G Clocl_0321 IPR036751 Stage V sporulation protein G superfamily Clocl_0322 IPR011004 Trimeric LpxA-like superfamily Clocl_0322 IPR005835 Nucleotidyl transferase domain Clocl_0322 IPR029044 Nucleotide-diphospho-sugar transferases Clocl_0322 IPR038009 GlmU, C-terminal LbH domain Clocl_0322 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase Clocl_0322 IPR001451 Hexapeptide repeat Clocl_0323 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type Clocl_0323 IPR005946 Ribose-phosphate pyrophosphokinase Clocl_0323 IPR029057 Phosphoribosyltransferase-like Clocl_0323 IPR000836 Phosphoribosyltransferase domain Clocl_0323 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain Clocl_0323 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site Clocl_0324 IPR001328 Peptidyl-tRNA hydrolase Clocl_0324 IPR018171 Peptidyl-tRNA hydrolase, conserved site Clocl_0324 IPR036416 Peptidyl-tRNA hydrolase superfamily Clocl_0325 IPR001650 Helicase, C-terminal Clocl_0325 IPR004576 Transcription-repair coupling factor Clocl_0325 IPR011545 DEAD/DEAH box helicase domain Clocl_0325 IPR005118 Transcription-repair-coupling factor, C-terminal domain Clocl_0325 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0325 IPR037235 TRCF-like, C-terminal domain Clocl_0325 IPR014001 Helicase superfamily 1/2, ATP-binding domain Clocl_0325 IPR041471 UvrB, interaction domain Clocl_0325 IPR003711 CarD-like/TRCF domain Clocl_0325 IPR036101 CarD-like/TRCF domain superfamily Clocl_0327 IPR014213 Sporulation stage V, protein T Clocl_0327 IPR007159 SpoVT-AbrB domain Clocl_0327 IPR037914 SpoVT-AbrB domain superfamily Clocl_0327 IPR039472 Sporulation stage V protein T, GAF domain Clocl_0327 IPR029016 GAF-like domain superfamily Clocl_0328 IPR005490 L,D-transpeptidase catalytic domain Clocl_0328 IPR018392 LysM domain Clocl_0328 IPR038063 L,D-transpeptidase catalytic domain-like Clocl_0328 IPR036779 LysM domain superfamily Clocl_0329 IPR011551 NTP pyrophosphohydrolase MazG Clocl_0329 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core Clocl_0330 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily Clocl_0330 IPR000119 Histone-like DNA-binding protein Clocl_0330 IPR020816 Histone-like DNA-binding protein, conserved site Clocl_0331 IPR025490 RNA-binding protein, HP1423 type Clocl_0331 IPR036986 RNA-binding S4 domain superfamily Clocl_0331 IPR002942 RNA-binding S4 domain Clocl_0335 IPR012340 Nucleic acid-binding, OB-fold Clocl_0335 IPR022967 RNA-binding domain, S1 Clocl_0335 IPR003029 S1 domain Clocl_0338 IPR002686 Transposase IS200-like Clocl_0338 IPR036515 Transposase IS200-like superfamily Clocl_0340 IPR003445 Cation transporter Clocl_0340 IPR004772 TrkH potassium transport family Clocl_0341 IPR003148 Regulator of K+ conductance, N-terminal Clocl_0341 IPR006036 Potassium uptake protein TrkA Clocl_0341 IPR036291 NAD(P)-binding domain superfamily Clocl_0341 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily Clocl_0341 IPR006037 Regulator of K+ conductance, C-terminal Clocl_0342 IPR001584 Integrase, catalytic core Clocl_0342 IPR025246 Transposase IS30-like HTH domain Clocl_0342 IPR012337 Ribonuclease H-like superfamily Clocl_0342 IPR036397 Ribonuclease H superfamily Clocl_0342 IPR001598 Transposase, IS30, conserved site Clocl_0343 IPR001207 Transposase, mutator type Clocl_0344 IPR002514 Transposase IS3/IS911family Clocl_0344 IPR009057 Homeobox-like domain superfamily Clocl_0345 IPR008878 Transposase IS66, Orf2 Clocl_0350 IPR001087 GDSL lipase/esterase Clocl_0350 IPR037461 CtCE2-like domain Clocl_0350 IPR002105 Dockerin type I repeat Clocl_0350 IPR016134 Dockerin domain Clocl_0350 IPR036439 Dockerin domain superfamily Clocl_0350 IPR008979 Galactose-binding-like domain superfamily Clocl_0350 IPR040794 Carbohydrate esterase 2, N-terminal Clocl_0350 IPR001547 Glycoside hydrolase, family 5 Clocl_0350 IPR018087 Glycoside hydrolase, family 5, conserved site Clocl_0350 IPR017853 Glycoside hydrolase superfamily Clocl_0350 IPR036514 SGNH hydrolase superfamily Clocl_0352 IPR000182 GNAT domain Clocl_0352 IPR016181 Acyl-CoA N-acyltransferase Clocl_0353 IPR017894 HTH domain, IS21 transposase-type Clocl_0353 IPR012337 Ribonuclease H-like superfamily Clocl_0353 IPR036397 Ribonuclease H superfamily Clocl_0353 IPR001584 Integrase, catalytic core Clocl_0354 IPR003593 AAA+ ATPase domain Clocl_0354 IPR001270 ClpA/B family Clocl_0354 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein Clocl_0354 IPR002611 IstB-like ATP-binding protein Clocl_0354 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0356 IPR027022 ABC transporter permease protein, BceB-type Clocl_0356 IPR003838 ABC transporter permease protein domain Clocl_0357 IPR003593 AAA+ ATPase domain Clocl_0357 IPR003439 ABC transporter-like Clocl_0357 IPR017871 ABC transporter, conserved site Clocl_0357 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0358 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Clocl_0358 IPR005467 Histidine kinase domain Clocl_0358 IPR003594 Histidine kinase/HSP90-like ATPase Clocl_0358 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clocl_0359 IPR001867 OmpR/PhoB-type DNA-binding domain Clocl_0359 IPR016032 Signal transduction response regulator, C-terminal effector Clocl_0359 IPR001789 Signal transduction response regulator, receiver domain Clocl_0359 IPR039420 Transcriptional regulatory protein WalR-like Clocl_0359 IPR011006 CheY-like superfamily Clocl_0359 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_0360 IPR003593 AAA+ ATPase domain Clocl_0360 IPR011527 ABC transporter type 1, transmembrane domain Clocl_0360 IPR036640 ABC transporter type 1, transmembrane domain superfamily Clocl_0360 IPR003439 ABC transporter-like Clocl_0360 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0360 IPR039421 Type I protein exporter Clocl_0361 IPR003593 AAA+ ATPase domain Clocl_0361 IPR011527 ABC transporter type 1, transmembrane domain Clocl_0361 IPR036640 ABC transporter type 1, transmembrane domain superfamily Clocl_0361 IPR003439 ABC transporter-like Clocl_0361 IPR017871 ABC transporter, conserved site Clocl_0361 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0361 IPR039421 Type I protein exporter Clocl_0362 IPR002751 Metal transport protein CbiM/NikMN Clocl_0362 IPR025937 PDGLE domain Clocl_0363 IPR012809 Cobalt ECF transporter T component CbiQ Clocl_0363 IPR003339 ABC/ECF transporter, transmembrane component Clocl_0364 IPR003593 AAA+ ATPase domain Clocl_0364 IPR003439 ABC transporter-like Clocl_0364 IPR017871 ABC transporter, conserved site Clocl_0364 IPR005876 Cobalt transport protein ATP-binding subunit Clocl_0364 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0366 IPR029000 Cyclophilin-like domain superfamily Clocl_0366 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase Clocl_0366 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain Clocl_0367 IPR041492 Haloacid dehalogenase-like hydrolase Clocl_0367 IPR006439 HAD hydrolase, subfamily IA Clocl_0367 IPR023214 HAD superfamily Clocl_0367 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Clocl_0367 IPR036412 HAD-like superfamily Clocl_0368 IPR004147 UbiB domain Clocl_0368 IPR000719 Protein kinase domain Clocl_0368 IPR011009 Protein kinase-like domain superfamily Clocl_0369 IPR001757 P-type ATPase Clocl_0369 IPR023214 HAD superfamily Clocl_0369 IPR036412 HAD-like superfamily Clocl_0369 IPR008250 P-type ATPase, A domain superfamily Clocl_0369 IPR023298 P-type ATPase, transmembrane domain superfamily Clocl_0369 IPR018303 P-type ATPase, phosphorylation site Clocl_0369 IPR023299 P-type ATPase, cytoplasmic domain N Clocl_0369 IPR006068 Cation-transporting P-type ATPase, C-terminal Clocl_0369 IPR004014 Cation-transporting P-type ATPase, N-terminal Clocl_0375 IPR001623 DnaJ domain Clocl_0375 IPR036869 Chaperone J-domain superfamily Clocl_0375 IPR018253 DnaJ domain, conserved site Clocl_0375 IPR008971 HSP40/DnaJ peptide-binding Clocl_0375 IPR023859 DNA-binding protein, curved-DNA Clocl_0375 IPR002939 Chaperone DnaJ, C-terminal Clocl_0376 IPR003593 AAA+ ATPase domain Clocl_0376 IPR003959 ATPase, AAA-type, core Clocl_0376 IPR017730 Chaperonin ClpB Clocl_0376 IPR019489 Clp ATPase, C-terminal Clocl_0376 IPR036628 Clp, N-terminal domain superfamily Clocl_0376 IPR004176 Clp, N-terminal Clocl_0376 IPR018368 ClpA/B, conserved site 1 Clocl_0376 IPR028299 ClpA/B, conserved site 2 Clocl_0376 IPR041546 ClpA/ClpB, AAA lid domain Clocl_0376 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0376 IPR001270 ClpA/B family Clocl_0377 IPR002941 DNA methylase N-4/N-6 Clocl_0377 IPR002052 DNA methylase, N-6 adenine-specific, conserved site Clocl_0377 IPR001091 Restriction/modification DNA-methylase Clocl_0377 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clocl_0378 IPR007160 Domain of unknown function DUF362 Clocl_0382 IPR036457 PPM-type phosphatase domain superfamily Clocl_0382 IPR001932 PPM-type phosphatase domain Clocl_0382 IPR014221 Sporulation stage II, protein E Clocl_0386 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Clocl_0386 IPR005467 Histidine kinase domain Clocl_0386 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clocl_0386 IPR010559 Signal transduction histidine kinase, internal region Clocl_0386 IPR003660 HAMP domain Clocl_0386 IPR033479 Double Cache domain 1 Clocl_0386 IPR003594 Histidine kinase/HSP90-like ATPase Clocl_0387 IPR011006 CheY-like superfamily Clocl_0387 IPR001789 Signal transduction response regulator, receiver domain Clocl_0387 IPR009057 Homeobox-like domain superfamily Clocl_0387 IPR018060 DNA binding HTH domain, AraC-type Clocl_0391 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 Clocl_0391 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal Clocl_0391 IPR035587 DUS-like, FMN-binding domain Clocl_0391 IPR013785 Aldolase-type TIM barrel Clocl_0391 IPR018517 tRNA-dihydrouridine synthase, conserved site Clocl_0391 IPR001269 tRNA-dihydrouridine synthase Clocl_0393 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase Clocl_0393 IPR006683 Thioesterase domain Clocl_0393 IPR029069 HotDog domain superfamily Clocl_0393 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain Clocl_0394 IPR000064 Endopeptidase, NLPC/P60 domain Clocl_0394 IPR038765 Papain-like cysteine peptidase superfamily Clocl_0394 IPR036779 LysM domain superfamily Clocl_0394 IPR018392 LysM domain Clocl_0395 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type Clocl_0395 IPR002797 Polysaccharide biosynthesis protein Clocl_0395 IPR014249 Sporulation stage V protein B Clocl_0395 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain Clocl_0396 IPR002068 Alpha crystallin/Hsp20 domain Clocl_0396 IPR031107 Small heat shock protein HSP20 Clocl_0396 IPR008978 HSP20-like chaperone Clocl_0398 IPR000537 UbiA prenyltransferase family Clocl_0398 IPR039653 Prenyltransferase Clocl_0400 IPR001451 Hexapeptide repeat Clocl_0400 IPR018357 Hexapeptide transferase, conserved site Clocl_0400 IPR011004 Trimeric LpxA-like superfamily Clocl_0401 IPR001296 Glycosyl transferase, family 1 Clocl_0401 IPR000368 Sucrose synthase Clocl_0405 IPR004443 YjeF N-terminal domain Clocl_0405 IPR017953 Carbohydrate kinase, predicted, conserved site Clocl_0405 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase Clocl_0405 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr Clocl_0405 IPR036652 YjeF N-terminal domain superfamily Clocl_0405 IPR029056 Ribokinase-like Clocl_0406 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal Clocl_0406 IPR000821 Alanine racemase Clocl_0406 IPR011079 Alanine racemase, C-terminal Clocl_0406 IPR001608 Alanine racemase, N-terminal Clocl_0406 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site Clocl_0406 IPR029066 PLP-binding barrel Clocl_0407 IPR013321 Arc-type ribbon-helix-helix Clocl_0407 IPR002145 Ribbon-helix-helix protein, CopG Clocl_0407 IPR010985 Ribbon-helix-helix Clocl_0408 IPR003477 mRNA interferase PemK-like Clocl_0408 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor Clocl_0411 IPR034714 N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase Clocl_0411 IPR004629 Glycosyl transferase WecB/TagA/CpsF Clocl_0413 IPR019264 Domain of unknown function DUF2179 Clocl_0413 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Clocl_0413 IPR003740 Uncharacterised membrane protein YitT Clocl_0414 IPR029061 Thiamin diphosphate-binding fold Clocl_0414 IPR005474 Transketolase, N-terminal Clocl_0415 IPR005475 Transketolase-like, pyrimidine-binding domain Clocl_0415 IPR033248 Transketolase, C-terminal domain Clocl_0415 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II Clocl_0415 IPR029061 Thiamin diphosphate-binding fold Clocl_0416 IPR001119 S-layer homology domain Clocl_0416 IPR010502 Carbohydrate-binding domain, family 9 Clocl_0416 IPR003305 Carbohydrate-binding, CenC-like Clocl_0416 IPR008979 Galactose-binding-like domain superfamily Clocl_0416 IPR001000 Glycoside hydrolase family 10 domain Clocl_0416 IPR031158 Glycosyl hydrolases family 10, active site Clocl_0416 IPR018087 Glycoside hydrolase, family 5, conserved site Clocl_0416 IPR017853 Glycoside hydrolase superfamily Clocl_0417 IPR018087 Glycoside hydrolase, family 5, conserved site Clocl_0417 IPR017853 Glycoside hydrolase superfamily Clocl_0417 IPR001119 S-layer homology domain Clocl_0417 IPR031158 Glycosyl hydrolases family 10, active site Clocl_0417 IPR001000 Glycoside hydrolase family 10 domain Clocl_0417 IPR003305 Carbohydrate-binding, CenC-like Clocl_0417 IPR010502 Carbohydrate-binding domain, family 9 Clocl_0417 IPR008979 Galactose-binding-like domain superfamily Clocl_0418 IPR018087 Glycoside hydrolase, family 5, conserved site Clocl_0418 IPR010502 Carbohydrate-binding domain, family 9 Clocl_0418 IPR003305 Carbohydrate-binding, CenC-like Clocl_0418 IPR008979 Galactose-binding-like domain superfamily Clocl_0418 IPR001000 Glycoside hydrolase family 10 domain Clocl_0418 IPR031158 Glycosyl hydrolases family 10, active site Clocl_0418 IPR017853 Glycoside hydrolase superfamily Clocl_0418 IPR001119 S-layer homology domain Clocl_0419 IPR018087 Glycoside hydrolase, family 5, conserved site Clocl_0419 IPR031158 Glycosyl hydrolases family 10, active site Clocl_0419 IPR001000 Glycoside hydrolase family 10 domain Clocl_0419 IPR008979 Galactose-binding-like domain superfamily Clocl_0419 IPR017853 Glycoside hydrolase superfamily Clocl_0419 IPR010502 Carbohydrate-binding domain, family 9 Clocl_0419 IPR003305 Carbohydrate-binding, CenC-like Clocl_0419 IPR001119 S-layer homology domain Clocl_0421 IPR001482 Type II/IV secretion system protein Clocl_0421 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0421 IPR022399 Helicase/secretion neighbourhood ATPase Clocl_0436 IPR011009 Protein kinase-like domain superfamily Clocl_0436 IPR005543 PASTA domain Clocl_0436 IPR000719 Protein kinase domain Clocl_0436 IPR017441 Protein kinase, ATP binding site Clocl_0436 IPR008271 Serine/threonine-protein kinase, active site Clocl_0441 IPR003593 AAA+ ATPase domain Clocl_0441 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0441 IPR017871 ABC transporter, conserved site Clocl_0441 IPR003439 ABC transporter-like Clocl_0444 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0444 IPR011703 ATPase, AAA-3 Clocl_0444 IPR041628 ChlI/MoxR, AAA lid domain Clocl_0446 IPR022933 Uncharacterised protein family UPF0353 Clocl_0446 IPR002035 von Willebrand factor, type A Clocl_0446 IPR036465 von Willebrand factor A-like domain superfamily Clocl_0446 IPR024163 Aerotolerance regulator, N-terminal Clocl_0449 IPR001207 Transposase, mutator type Clocl_0453 IPR011006 CheY-like superfamily Clocl_0453 IPR001867 OmpR/PhoB-type DNA-binding domain Clocl_0453 IPR001789 Signal transduction response regulator, receiver domain Clocl_0453 IPR039420 Transcriptional regulatory protein WalR-like Clocl_0453 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_0454 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Clocl_0454 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Clocl_0454 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Clocl_0454 IPR035965 PAS domain superfamily Clocl_0454 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clocl_0454 IPR005467 Histidine kinase domain Clocl_0454 IPR003660 HAMP domain Clocl_0454 IPR000014 PAS domain Clocl_0454 IPR003594 Histidine kinase/HSP90-like ATPase Clocl_0456 IPR003593 AAA+ ATPase domain Clocl_0456 IPR003439 ABC transporter-like Clocl_0456 IPR017871 ABC transporter, conserved site Clocl_0456 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0460 IPR020915 Uncharacterised protein family UPF0311 Clocl_0463 IPR010982 Lambda repressor-like, DNA-binding domain superfamily Clocl_0463 IPR028082 Periplasmic binding protein-like I Clocl_0463 IPR000843 LacI-type HTH domain Clocl_0464 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily Clocl_0464 IPR008928 Six-hairpin glycosidase superfamily Clocl_0464 IPR012341 Six-hairpin glycosidase-like superfamily Clocl_0464 IPR009342 Putative carbohydrate binding domain Clocl_0464 IPR011013 Galactose mutarotase-like domain superfamily Clocl_0464 IPR033432 Glycosyl hydrolase 36, catalytic domain Clocl_0464 IPR037825 Cellobiose phosphorylase, N-terminal Clocl_0464 IPR010383 Glycosyl hydrolase 94 Clocl_0465 IPR008928 Six-hairpin glycosidase superfamily Clocl_0465 IPR012341 Six-hairpin glycosidase-like superfamily Clocl_0465 IPR009342 Putative carbohydrate binding domain Clocl_0465 IPR011013 Galactose mutarotase-like domain superfamily Clocl_0465 IPR033432 Glycosyl hydrolase 36, catalytic domain Clocl_0465 IPR037825 Cellobiose phosphorylase, N-terminal Clocl_0465 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily Clocl_0465 IPR010383 Glycosyl hydrolase 94 Clocl_0467 IPR036439 Dockerin domain superfamily Clocl_0467 IPR018221 Glycoside hydrolase family 9, His active site Clocl_0467 IPR033126 Glycosyl hydrolases family 9, Asp/Glu active sites Clocl_0467 IPR001701 Glycoside hydrolase family 9 Clocl_0467 IPR016134 Dockerin domain Clocl_0467 IPR002105 Dockerin type I repeat Clocl_0467 IPR036966 Carbohydrate-binding module 3 superfamily Clocl_0467 IPR001956 Carbohydrate-binding module 3 Clocl_0467 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clocl_0467 IPR012341 Six-hairpin glycosidase-like superfamily Clocl_0467 IPR008928 Six-hairpin glycosidase superfamily Clocl_0469 IPR011006 CheY-like superfamily Clocl_0469 IPR001867 OmpR/PhoB-type DNA-binding domain Clocl_0469 IPR016032 Signal transduction response regulator, C-terminal effector Clocl_0469 IPR001789 Signal transduction response regulator, receiver domain Clocl_0469 IPR039420 Transcriptional regulatory protein WalR-like Clocl_0469 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_0470 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Clocl_0470 IPR031967 PhoR, single Cache-like domain Clocl_0470 IPR013767 PAS fold Clocl_0470 IPR035965 PAS domain superfamily Clocl_0470 IPR000014 PAS domain Clocl_0470 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Clocl_0470 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Clocl_0470 IPR005467 Histidine kinase domain Clocl_0470 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clocl_0470 IPR003594 Histidine kinase/HSP90-like ATPase Clocl_0472 IPR013986 DExx box DNA helicase domain superfamily Clocl_0472 IPR014017 UvrD-like DNA helicase, C-terminal Clocl_0472 IPR000212 DNA helicase, UvrD/REP type Clocl_0472 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0472 IPR014016 UvrD-like helicase, ATP-binding domain Clocl_0472 IPR034739 UvrD/AddA helicase, N-terminal Clocl_0473 IPR004104 Oxidoreductase, C-terminal Clocl_0473 IPR036291 NAD(P)-binding domain superfamily Clocl_0473 IPR000683 Oxidoreductase, N-terminal Clocl_0475 IPR028082 Periplasmic binding protein-like I Clocl_0475 IPR010982 Lambda repressor-like, DNA-binding domain superfamily Clocl_0475 IPR000843 LacI-type HTH domain Clocl_0476 IPR016181 Acyl-CoA N-acyltransferase Clocl_0476 IPR000182 GNAT domain Clocl_0477 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain Clocl_0477 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily Clocl_0477 IPR003356 DNA methylase, adenine-specific Clocl_0477 IPR002052 DNA methylase, N-6 adenine-specific, conserved site Clocl_0477 IPR004546 Restriction endonuclease, type I, HsdM Clocl_0477 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clocl_0484 IPR001207 Transposase, mutator type Clocl_0489 IPR002292 Ornithine/putrescine carbamoyltransferase Clocl_0489 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding Clocl_0489 IPR006130 Aspartate/ornithine carbamoyltransferase Clocl_0489 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily Clocl_0489 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain Clocl_0489 IPR024904 Ornithine carbamoyltransferase Clocl_0490 IPR004636 Acetylornithine/Succinylornithine transaminase family Clocl_0490 IPR005814 Aminotransferase class-III Clocl_0490 IPR015424 Pyridoxal phosphate-dependent transferase Clocl_0490 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Clocl_0490 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Clocl_0492 IPR036393 Acetylglutamate kinase-like superfamily Clocl_0492 IPR004662 Acetylglutamate kinase family Clocl_0492 IPR037528 Acetylglutamate kinase ArgB Clocl_0492 IPR041727 N-Acetyl-L-glutamate kinase, cyclic Clocl_0492 IPR001057 Glutamate/acetylglutamate kinase Clocl_0492 IPR001048 Aspartate/glutamate/uridylate kinase Clocl_0493 IPR036291 NAD(P)-binding domain superfamily Clocl_0493 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 Clocl_0493 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site Clocl_0493 IPR012280 Semialdehyde dehydrogenase, dimerisation domain Clocl_0493 IPR000534 Semialdehyde dehydrogenase, NAD-binding Clocl_0494 IPR017871 ABC transporter, conserved site Clocl_0494 IPR040582 MalK, OB fold domain Clocl_0494 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0494 IPR003439 ABC transporter-like Clocl_0494 IPR008995 Molybdate/tungstate binding, C-terminal Clocl_0494 IPR005116 Transport-associated OB, type 1 Clocl_0494 IPR003593 AAA+ ATPase domain Clocl_0495 IPR041522 CdaR, GGDEF-like domain Clocl_0495 IPR025736 PucR C-terminal helix-turn-helix domain Clocl_0495 IPR042070 PucR C-terminal helix-turn-helix domain superfamily Clocl_0495 IPR012914 Purine catabolism PurC-like domain Clocl_0496 IPR017871 ABC transporter, conserved site Clocl_0496 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0496 IPR005286 Cell division protein FtsE, ATP-binding Clocl_0496 IPR003593 AAA+ ATPase domain Clocl_0496 IPR003439 ABC transporter-like Clocl_0497 IPR040690 FtsX, extracellular domain Clocl_0497 IPR003838 ABC transporter permease protein domain Clocl_0497 IPR004513 Cell division protein FtsX Clocl_0498 IPR011055 Duplicated hybrid motif Clocl_0498 IPR007340 Opacity-associated protein A Clocl_0498 IPR016047 Peptidase M23 Clocl_0499 IPR004447 C-terminal-processing peptidase S41A Clocl_0499 IPR002477 Peptidoglycan binding-like Clocl_0499 IPR036365 PGBD-like superfamily Clocl_0499 IPR036366 PGBD superfamily Clocl_0499 IPR005151 Tail specific protease Clocl_0499 IPR029045 ClpP/crotonase-like domain superfamily Clocl_0499 IPR036034 PDZ superfamily Clocl_0499 IPR001478 PDZ domain Clocl_0499 IPR041489 PDZ domain 6 Clocl_0501 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clocl_0501 IPR041698 Methyltransferase domain 25 Clocl_0502 IPR012340 Nucleic acid-binding, OB-fold Clocl_0502 IPR002059 Cold-shock protein, DNA-binding Clocl_0502 IPR019844 Cold-shock (CSD) domain Clocl_0502 IPR012156 Cold shock, CspA Clocl_0502 IPR011129 Cold shock domain Clocl_0503 IPR000397 Heat shock protein Hsp33 Clocl_0503 IPR016154 Heat shock protein Hsp33, C-terminal Clocl_0503 IPR016153 Heat shock protein Hsp33, N-terminal Clocl_0509 IPR001598 Transposase, IS30, conserved site Clocl_0509 IPR036397 Ribonuclease H superfamily Clocl_0509 IPR012337 Ribonuclease H-like superfamily Clocl_0509 IPR025246 Transposase IS30-like HTH domain Clocl_0509 IPR001584 Integrase, catalytic core Clocl_0513 IPR000957 Sulphate/thiosulphate-binding, conserved site Clocl_0513 IPR005669 Thiosulphate/Sulfate-binding protein Clocl_0513 IPR034408 Sulphate/thiosulphate-binding site Clocl_0514 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Clocl_0514 IPR035906 MetI-like superfamily Clocl_0514 IPR011865 Sulphate ABC transporter, permease protein CysT Clocl_0514 IPR005667 Sulphate ABC transporter permease protein 2 Clocl_0515 IPR011866 Sulphate ABC transporter, permease protein CysW Clocl_0515 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Clocl_0515 IPR035906 MetI-like superfamily Clocl_0515 IPR005667 Sulphate ABC transporter permease protein 2 Clocl_0516 IPR005666 Sulphate transport system permease protein 1 Clocl_0516 IPR024765 TOBE-like domain Clocl_0516 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0516 IPR041193 CysA, C-terminal regulatory domain Clocl_0516 IPR017871 ABC transporter, conserved site Clocl_0516 IPR003439 ABC transporter-like Clocl_0516 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal Clocl_0516 IPR003593 AAA+ ATPase domain Clocl_0516 IPR008995 Molybdate/tungstate binding, C-terminal Clocl_0518 IPR036412 HAD-like superfamily Clocl_0518 IPR017718 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase Clocl_0518 IPR023214 HAD superfamily Clocl_0518 IPR006384 Pyridoxal phosphate phosphatase-related Clocl_0520 IPR016101 CO dehydrogenase, alpha-bundle Clocl_0520 IPR010047 Ni-containing CO dehydrogenase Clocl_0520 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase Clocl_0520 IPR016099 Prismane-like, alpha/beta-sandwich Clocl_0520 IPR011254 Prismane-like superfamily Clocl_0522 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_0522 IPR011006 CheY-like superfamily Clocl_0522 IPR001789 Signal transduction response regulator, receiver domain Clocl_0522 IPR016032 Signal transduction response regulator, C-terminal effector Clocl_0522 IPR001867 OmpR/PhoB-type DNA-binding domain Clocl_0522 IPR039420 Transcriptional regulatory protein WalR-like Clocl_0524 IPR030678 Peptide/nickel binding protein, MppA-type Clocl_0524 IPR039424 Solute-binding protein family 5 Clocl_0524 IPR023765 Solute-binding protein family 5, conserved site Clocl_0524 IPR000914 Solute-binding protein family 5 domain Clocl_0525 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain Clocl_0525 IPR016381 Signal transduction histidine kinase, DegS Clocl_0525 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clocl_0525 IPR003594 Histidine kinase/HSP90-like ATPase Clocl_0525 IPR005467 Histidine kinase domain Clocl_0525 IPR008595 Sensor DegS Clocl_0527 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain Clocl_0528 IPR018392 LysM domain Clocl_0528 IPR036779 LysM domain superfamily Clocl_0528 IPR000064 Endopeptidase, NLPC/P60 domain Clocl_0528 IPR038765 Papain-like cysteine peptidase superfamily Clocl_0528 IPR003646 SH3-like domain, bacterial-type Clocl_0533 IPR038765 Papain-like cysteine peptidase superfamily Clocl_0533 IPR036779 LysM domain superfamily Clocl_0533 IPR018392 LysM domain Clocl_0533 IPR007921 CHAP domain Clocl_0534 IPR003781 CoA-binding Clocl_0534 IPR036291 NAD(P)-binding domain superfamily Clocl_0534 IPR009718 Rex DNA-binding, C-terminal domain Clocl_0534 IPR022876 Redox-sensing transcriptional repressor Rex Clocl_0534 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_0534 IPR036390 Winged helix DNA-binding domain superfamily Clocl_0535 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0535 IPR017871 ABC transporter, conserved site Clocl_0535 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily Clocl_0535 IPR032781 ABC-transporter extension domain Clocl_0535 IPR032524 ABC transporter Uup, C-terminal Clocl_0535 IPR003439 ABC transporter-like Clocl_0535 IPR003593 AAA+ ATPase domain Clocl_0539 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily Clocl_0539 IPR002912 ACT domain Clocl_0539 IPR036291 NAD(P)-binding domain superfamily Clocl_0539 IPR003099 Prephenate dehydrogenase Clocl_0540 IPR006268 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 Clocl_0540 IPR006218 DAHP synthetase I/KDSA Clocl_0540 IPR013785 Aldolase-type TIM barrel Clocl_0540 IPR041071 DAHP synthase ferredoxin-like domain Clocl_0541 IPR041095 Elongation Factor G, domain II Clocl_0541 IPR009022 Elongation factor G, domain III Clocl_0541 IPR035649 EFG, domain V Clocl_0541 IPR000640 Elongation factor EFG, domain V-like Clocl_0541 IPR004161 Translation elongation factor EFTu-like, domain 2 Clocl_0541 IPR031157 Tr-type G domain, conserved site Clocl_0541 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0541 IPR020568 Ribosomal protein S5 domain 2-type fold Clocl_0541 IPR005225 Small GTP-binding protein domain Clocl_0541 IPR000795 Transcription factor, GTP-binding domain Clocl_0541 IPR009000 Translation protein, beta-barrel domain superfamily Clocl_0541 IPR004540 Translation elongation factor EFG/EF2 Clocl_0541 IPR005517 Translation elongation factor EFG/EF2, domain IV Clocl_0541 IPR035647 EF-G domain III/V-like Clocl_0541 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Clocl_0544 IPR008463 Transcriptional regulator CtsR Clocl_0544 IPR041473 CtsR, C-terminal dimerization domain Clocl_0544 IPR041908 CtsR, C-terminal domain superfamily Clocl_0544 IPR040465 CtsR, N-terminal HTH domain Clocl_0544 IPR041902 CtsR, N-terminal domain superfamily Clocl_0545 IPR036876 UVR domain superfamily Clocl_0545 IPR001943 UVR domain Clocl_0545 IPR025542 YacH protein Clocl_0546 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain Clocl_0546 IPR022415 ATP:guanido phosphotransferase active site Clocl_0546 IPR000749 ATP:guanido phosphotransferase Clocl_0546 IPR023660 Protein arginine kinase Clocl_0546 IPR022414 ATP:guanido phosphotransferase, catalytic domain Clocl_0547 IPR018368 ClpA/B, conserved site 1 Clocl_0547 IPR028299 ClpA/B, conserved site 2 Clocl_0547 IPR001270 ClpA/B family Clocl_0547 IPR041546 ClpA/ClpB, AAA lid domain Clocl_0547 IPR004176 Clp, N-terminal Clocl_0547 IPR036628 Clp, N-terminal domain superfamily Clocl_0547 IPR019489 Clp ATPase, C-terminal Clocl_0547 IPR003959 ATPase, AAA-type, core Clocl_0547 IPR001943 UVR domain Clocl_0547 IPR003593 AAA+ ATPase domain Clocl_0547 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0554 IPR025403 Domain of unknown function DUF4129 Clocl_0554 IPR038765 Papain-like cysteine peptidase superfamily Clocl_0554 IPR021878 Protein-glutamine gamma-glutamyltransferase TgpA, N-terminal Clocl_0554 IPR002931 Transglutaminase-like Clocl_0556 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0556 IPR011703 ATPase, AAA-3 Clocl_0556 IPR041628 ChlI/MoxR, AAA lid domain Clocl_0559 IPR036397 Ribonuclease H superfamily Clocl_0559 IPR001598 Transposase, IS30, conserved site Clocl_0559 IPR012337 Ribonuclease H-like superfamily Clocl_0559 IPR025246 Transposase IS30-like HTH domain Clocl_0559 IPR001584 Integrase, catalytic core Clocl_0560 IPR001789 Signal transduction response regulator, receiver domain Clocl_0560 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Clocl_0560 IPR029151 Periplasmic sensor-like domain superfamily Clocl_0560 IPR015387 LuxQ, periplasmic Clocl_0560 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Clocl_0560 IPR005467 Histidine kinase domain Clocl_0560 IPR011006 CheY-like superfamily Clocl_0560 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Clocl_0560 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clocl_0560 IPR003594 Histidine kinase/HSP90-like ATPase Clocl_0562 IPR029044 Nucleotide-diphospho-sugar transferases Clocl_0564 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Clocl_0564 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain Clocl_0564 IPR041166 LapB, rubredoxin metal binding domain Clocl_0564 IPR004504 DNA repair protein RadA Clocl_0564 IPR003593 AAA+ ATPase domain Clocl_0564 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0564 IPR020568 Ribosomal protein S5 domain 2-type fold Clocl_0565 IPR038331 DisA, linker domain superfamily Clocl_0565 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily Clocl_0565 IPR018906 DNA integrity scanning, DisA, linker region Clocl_0565 IPR003390 DNA integrity scanning protein, DisA, N-terminal Clocl_0565 IPR023763 DNA integrity scanning protein, DisA Clocl_0565 IPR010994 RuvA domain 2-like Clocl_0567 IPR042215 CarD-like, C-terminal domain Clocl_0567 IPR003711 CarD-like/TRCF domain Clocl_0567 IPR036101 CarD-like/TRCF domain superfamily Clocl_0568 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Clocl_0568 IPR034683 Cytidylyltransferase IspD/TarI Clocl_0568 IPR029044 Nucleotide-diphospho-sugar transferases Clocl_0569 IPR003593 AAA+ ATPase domain Clocl_0569 IPR003439 ABC transporter-like Clocl_0569 IPR017871 ABC transporter, conserved site Clocl_0569 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0570 IPR032688 ABC-2 family transporter protein Clocl_0571 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Clocl_0571 IPR029151 Periplasmic sensor-like domain superfamily Clocl_0571 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Clocl_0571 IPR003594 Histidine kinase/HSP90-like ATPase Clocl_0571 IPR005467 Histidine kinase domain Clocl_0571 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clocl_0571 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Clocl_0572 IPR003594 Histidine kinase/HSP90-like ATPase Clocl_0572 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clocl_0572 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Clocl_0572 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Clocl_0572 IPR000014 PAS domain Clocl_0572 IPR035965 PAS domain superfamily Clocl_0572 IPR013767 PAS fold Clocl_0572 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Clocl_0572 IPR005467 Histidine kinase domain Clocl_0573 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase Clocl_0573 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site Clocl_0573 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily Clocl_0574 IPR035940 CAP superfamily Clocl_0574 IPR014044 CAP domain Clocl_0574 IPR014258 CAP domain, YkwD-like Clocl_0575 IPR002528 Multi antimicrobial extrusion protein Clocl_0579 IPR001466 Beta-lactamase-related Clocl_0579 IPR012338 Beta-lactamase/transpeptidase-like Clocl_0580 IPR036291 NAD(P)-binding domain superfamily Clocl_0580 IPR010080 Thioester reductase-like domain Clocl_0580 IPR006162 Phosphopantetheine attachment site Clocl_0580 IPR009081 Phosphopantetheine binding ACP domain Clocl_0580 IPR020806 Polyketide synthase, phosphopantetheine-binding domain Clocl_0580 IPR010060 Non-ribosomal peptide synthase Clocl_0580 IPR013120 Male sterility, NAD-binding Clocl_0580 IPR020845 AMP-binding, conserved site Clocl_0580 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Clocl_0580 IPR042099 AMP-dependent synthetase-like superfamily Clocl_0580 IPR000873 AMP-dependent synthetase/ligase Clocl_0580 IPR025110 AMP-binding enzyme, C-terminal domain Clocl_0580 IPR036736 ACP-like superfamily Clocl_0580 IPR010071 Amino acid adenylation domain Clocl_0580 IPR001242 Condensation domain Clocl_0581 IPR001242 Condensation domain Clocl_0581 IPR006162 Phosphopantetheine attachment site Clocl_0581 IPR009081 Phosphopantetheine binding ACP domain Clocl_0581 IPR010060 Non-ribosomal peptide synthase Clocl_0581 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Clocl_0581 IPR020806 Polyketide synthase, phosphopantetheine-binding domain Clocl_0581 IPR000873 AMP-dependent synthetase/ligase Clocl_0581 IPR020845 AMP-binding, conserved site Clocl_0581 IPR025110 AMP-binding enzyme, C-terminal domain Clocl_0581 IPR036736 ACP-like superfamily Clocl_0581 IPR010071 Amino acid adenylation domain Clocl_0581 IPR042099 AMP-dependent synthetase-like superfamily Clocl_0582 IPR017894 HTH domain, IS21 transposase-type Clocl_0582 IPR001584 Integrase, catalytic core Clocl_0584 IPR036986 RNA-binding S4 domain superfamily Clocl_0584 IPR002942 RNA-binding S4 domain Clocl_0584 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site Clocl_0584 IPR006225 Pseudouridine synthase, RluC/RluD Clocl_0584 IPR020103 Pseudouridine synthase, catalytic domain superfamily Clocl_0584 IPR006145 Pseudouridine synthase, RsuA/RluA Clocl_0585 IPR037538 UTP--glucose-1-phosphate uridylyltransferase, cyanobacteria Clocl_0585 IPR005835 Nucleotidyl transferase domain Clocl_0585 IPR029044 Nucleotide-diphospho-sugar transferases Clocl_0586 IPR036366 PGBD superfamily Clocl_0586 IPR002477 Peptidoglycan binding-like Clocl_0586 IPR036365 PGBD-like superfamily Clocl_0586 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Clocl_0586 IPR013230 Peptidase M15A, C-terminal Clocl_0588 IPR006056 RidA family Clocl_0588 IPR019897 RidA, conserved site Clocl_0588 IPR035959 RutC-like superfamily Clocl_0588 IPR006175 YjgF/YER057c/UK114 family Clocl_0589 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal Clocl_0589 IPR017121 Nitrite reductase [NAD(P)H], large subunit Clocl_0589 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB Clocl_0589 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily Clocl_0589 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain Clocl_0589 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily Clocl_0589 IPR036188 FAD/NAD(P)-binding domain superfamily Clocl_0589 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily Clocl_0589 IPR007419 BFD-like [2Fe-2S]-binding domain Clocl_0589 IPR023753 FAD/NAD(P)-binding domain Clocl_0590 IPR013216 Methyltransferase type 11 Clocl_0590 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clocl_0590 IPR010233 Ubiquinone biosynthesis O-methyltransferase Clocl_0591 IPR036237 Xylose isomerase-like superfamily Clocl_0591 IPR004601 UV-endonuclease UvdE Clocl_0591 IPR023520 UV-endonuclease UvdE, bacterial Clocl_0594 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site Clocl_0594 IPR005926 Tagatose-6-phosphate kinase Clocl_0594 IPR011611 Carbohydrate kinase PfkB Clocl_0594 IPR029056 Ribokinase-like Clocl_0594 IPR017583 Tagatose/fructose phosphokinase Clocl_0595 IPR011006 CheY-like superfamily Clocl_0595 IPR000160 GGDEF domain Clocl_0595 IPR029787 Nucleotide cyclase Clocl_0595 IPR001789 Signal transduction response regulator, receiver domain Clocl_0596 IPR018974 Tex-like protein, N-terminal Clocl_0596 IPR037027 YqgF/RNase H-like domain superfamily Clocl_0596 IPR006641 YqgF/RNase H-like domain Clocl_0596 IPR032639 Tex protein, YqgF-like domain Clocl_0596 IPR023319 Tex-like protein, HTH domain superfamily Clocl_0596 IPR023323 Tex-like domain superfamily Clocl_0596 IPR022967 RNA-binding domain, S1 Clocl_0596 IPR010994 RuvA domain 2-like Clocl_0596 IPR012337 Ribonuclease H-like superfamily Clocl_0596 IPR012340 Nucleic acid-binding, OB-fold Clocl_0596 IPR041692 HHH domain 9 Clocl_0596 IPR003029 S1 domain Clocl_0598 IPR011105 Cell wall hydrolase, SleB Clocl_0598 IPR002477 Peptidoglycan binding-like Clocl_0598 IPR036365 PGBD-like superfamily Clocl_0598 IPR036366 PGBD superfamily Clocl_0598 IPR042047 Cell wall hydrolase SleB, domain 1 Clocl_0598 IPR014224 Spore cortex-lytic enzyme SleB Clocl_0603 IPR003834 Cytochrome C biogenesis protein, transmembrane domain Clocl_0604 IPR013766 Thioredoxin domain Clocl_0604 IPR023555 Thiol-disulphide oxidoreductase ResA Clocl_0604 IPR036249 Thioredoxin-like superfamily Clocl_0604 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant Clocl_0605 IPR005982 Thioredoxin reductase Clocl_0605 IPR036188 FAD/NAD(P)-binding domain superfamily Clocl_0605 IPR023753 FAD/NAD(P)-binding domain Clocl_0605 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site Clocl_0606 IPR005982 Thioredoxin reductase Clocl_0606 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site Clocl_0606 IPR023753 FAD/NAD(P)-binding domain Clocl_0606 IPR036188 FAD/NAD(P)-binding domain superfamily Clocl_0608 IPR017758 Coenzyme A disulphide reductase Clocl_0608 IPR023536 Coenzyme A disulphide reductase, staphyolococci Clocl_0608 IPR036188 FAD/NAD(P)-binding domain superfamily Clocl_0608 IPR023753 FAD/NAD(P)-binding domain Clocl_0608 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily Clocl_0608 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Clocl_0609 IPR036390 Winged helix DNA-binding domain superfamily Clocl_0609 IPR001845 HTH ArsR-type DNA-binding domain Clocl_0609 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_0609 IPR011991 ArsR-like helix-turn-helix domain Clocl_0610 IPR013785 Aldolase-type TIM barrel Clocl_0610 IPR011343 Deoxyribose-phosphate aldolase Clocl_0610 IPR002915 DeoC/FbaB/ lacD aldolase Clocl_0610 IPR028581 Deoxyribose-phosphate aldolase type I Clocl_0612 IPR013324 RNA polymerase sigma factor, region 3/4-like Clocl_0612 IPR039425 RNA polymerase sigma-70 like Clocl_0612 IPR014284 RNA polymerase sigma-70 like domain Clocl_0612 IPR007627 RNA polymerase sigma-70 region 2 Clocl_0612 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 Clocl_0612 IPR013325 RNA polymerase sigma factor, region 2 Clocl_0612 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_0618 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clocl_0618 IPR002102 Cellulosome anchoring protein, cohesin domain Clocl_0618 IPR001119 S-layer homology domain Clocl_0619 IPR033186 Helicase HerA-like C-terminal Clocl_0619 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0620 IPR007325 Kynurenine formamidase/cyclase-like Clocl_0620 IPR037175 Kynurenine formamidase superfamily Clocl_0620 IPR017484 Kynurenine formamidase, bacteria Clocl_0623 IPR011761 ATP-grasp fold Clocl_0623 IPR016185 Pre-ATP-grasp domain superfamily Clocl_0623 IPR011127 D-alanine--D-alanine ligase, N-terminal domain Clocl_0623 IPR011095 D-alanine--D-alanine ligase, C-terminal Clocl_0623 IPR005905 D-alanine--D-alanine ligase Clocl_0623 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site Clocl_0623 IPR013815 ATP-grasp fold, subdomain 1 Clocl_0624 IPR004391 Glutamate racemase Clocl_0624 IPR015942 Asp/Glu/hydantoin racemase Clocl_0624 IPR001920 Asp/Glu racemase Clocl_0624 IPR018187 Asp/Glu racemase, active site 1 Clocl_0624 IPR033134 Asp/Glu racemase, active site 2 Clocl_0626 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clocl_0626 IPR008909 DALR anticodon binding Clocl_0626 IPR035684 Arginyl-tRNA synthetase, catalytic core domain Clocl_0626 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily Clocl_0626 IPR005148 Arginyl tRNA synthetase N-terminal domain Clocl_0626 IPR001278 Arginine-tRNA ligase Clocl_0626 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site Clocl_0626 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding Clocl_0627 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Clocl_0627 IPR022877 Protein of unknown funcion UPF0173 Clocl_0627 IPR001279 Metallo-beta-lactamase Clocl_0628 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain Clocl_0628 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clocl_0628 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clocl_0628 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II Clocl_0628 IPR037112 Pyruvate-flavodoxin oxidoreductase, EKR domain superfamily Clocl_0628 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain Clocl_0628 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal Clocl_0628 IPR011895 Pyruvate-flavodoxin oxidoreductase Clocl_0628 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain Clocl_0628 IPR029061 Thiamin diphosphate-binding fold Clocl_0628 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II Clocl_0628 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding Clocl_0630 IPR018087 Glycoside hydrolase, family 5, conserved site Clocl_0630 IPR005086 Carbohydrate binding module family 17/28 Clocl_0630 IPR008979 Galactose-binding-like domain superfamily Clocl_0630 IPR001547 Glycoside hydrolase, family 5 Clocl_0630 IPR017853 Glycoside hydrolase superfamily Clocl_0630 IPR001119 S-layer homology domain Clocl_0631 IPR001478 PDZ domain Clocl_0631 IPR029045 ClpP/crotonase-like domain superfamily Clocl_0631 IPR036034 PDZ superfamily Clocl_0631 IPR005151 Tail specific protease Clocl_0631 IPR004447 C-terminal-processing peptidase S41A Clocl_0634 IPR033828 CTP synthase GATase domain Clocl_0634 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0634 IPR017926 Glutamine amidotransferase Clocl_0634 IPR017456 CTP synthase, N-terminal Clocl_0634 IPR004468 CTP synthase Clocl_0634 IPR029062 Class I glutamine amidotransferase-like Clocl_0635 IPR014202 Sporulation stage II, protein R Clocl_0636 IPR003416 MgtC/SapB/SrpB/YhiD family Clocl_0637 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal Clocl_0637 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Clocl_0637 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Clocl_0637 IPR015424 Pyridoxal phosphate-dependent transferase Clocl_0637 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily Clocl_0637 IPR000310 Orn/Lys/Arg decarboxylase, major domain Clocl_0638 IPR006068 Cation-transporting P-type ATPase, C-terminal Clocl_0638 IPR004014 Cation-transporting P-type ATPase, N-terminal Clocl_0638 IPR023299 P-type ATPase, cytoplasmic domain N Clocl_0638 IPR018303 P-type ATPase, phosphorylation site Clocl_0638 IPR023298 P-type ATPase, transmembrane domain superfamily Clocl_0638 IPR008250 P-type ATPase, A domain superfamily Clocl_0638 IPR036412 HAD-like superfamily Clocl_0638 IPR005782 P-type ATPase, subfamily IIA, SERCA-type Clocl_0638 IPR001757 P-type ATPase Clocl_0638 IPR023214 HAD superfamily Clocl_0639 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0639 IPR017871 ABC transporter, conserved site Clocl_0639 IPR003439 ABC transporter-like Clocl_0639 IPR003593 AAA+ ATPase domain Clocl_0643 IPR038728 Uncharacterized membrane protein YkvI Clocl_0646 IPR042096 Dihydroxy-acid dehydratase, C-terminal Clocl_0646 IPR004404 Dihydroxy-acid dehydratase Clocl_0646 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase Clocl_0646 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site Clocl_0646 IPR037237 IlvD/EDD, N-terminal domain Clocl_0647 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding Clocl_0647 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain Clocl_0647 IPR012000 Thiamine pyrophosphate enzyme, central domain Clocl_0647 IPR029061 Thiamin diphosphate-binding fold Clocl_0647 IPR012846 Acetolactate synthase, large subunit, biosynthetic Clocl_0647 IPR039368 Acetolactate synthase large subunit, TPP binding domain Clocl_0647 IPR029035 DHS-like NAD/FAD-binding domain superfamily Clocl_0648 IPR011332 Zinc-binding ribosomal protein Clocl_0648 IPR018264 Ribosomal protein L33, conserved site Clocl_0648 IPR038584 Ribosomal protein L33 superfamily Clocl_0648 IPR001705 Ribosomal protein L33 Clocl_0649 IPR005807 SecE subunit of protein translocation complex, bacterial-like Clocl_0649 IPR038379 SecE superfamily Clocl_0649 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit Clocl_0650 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site Clocl_0650 IPR005824 KOW Clocl_0650 IPR001062 Transcription antitermination protein, NusG Clocl_0650 IPR014722 Ribosomal protein L2, domain 2 Clocl_0650 IPR036735 NusG, N-terminal domain superfamily Clocl_0650 IPR008991 Translation protein SH3-like domain superfamily Clocl_0650 IPR006645 NusG, N-terminal Clocl_0651 IPR036769 Ribosomal protein L11, C-terminal domain superfamily Clocl_0651 IPR000911 Ribosomal protein L11/L12 Clocl_0651 IPR020783 Ribosomal protein L11, C-terminal Clocl_0651 IPR020784 Ribosomal protein L11, N-terminal Clocl_0651 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily Clocl_0651 IPR006519 Ribosomal protein L11, bacterial-type Clocl_0652 IPR005878 Ribosomal protein L1, bacterial-type Clocl_0652 IPR002143 Ribosomal protein L1 Clocl_0652 IPR023674 Ribosomal protein L1-like Clocl_0652 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein Clocl_0652 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich Clocl_0652 IPR023673 Ribosomal protein L1, conserved site Clocl_0653 IPR022973 Ribosomal protein L10 Clocl_0653 IPR001790 Ribosomal protein L10P Clocl_0654 IPR000206 Ribosomal protein L7/L12 Clocl_0654 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Clocl_0654 IPR013823 Ribosomal protein L7/L12, C-terminal Clocl_0654 IPR008932 Ribosomal protein L7/L12, oligomerisation Clocl_0654 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily Clocl_0655 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain Clocl_0655 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain Clocl_0655 IPR015712 DNA-directed RNA polymerase, subunit 2 Clocl_0655 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type Clocl_0655 IPR007121 RNA polymerase, beta subunit, conserved site Clocl_0655 IPR007642 RNA polymerase Rpb2, domain 2 Clocl_0655 IPR007645 RNA polymerase Rpb2, domain 3 Clocl_0655 IPR007641 RNA polymerase Rpb2, domain 7 Clocl_0655 IPR014724 RNA polymerase Rpb2, OB-fold Clocl_0655 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily Clocl_0655 IPR007644 RNA polymerase, beta subunit, protrusion Clocl_0656 IPR000722 RNA polymerase, alpha subunit Clocl_0656 IPR006592 RNA polymerase, N-terminal Clocl_0656 IPR007083 RNA polymerase Rpb1, domain 4 Clocl_0656 IPR042102 RNA polymerase Rpb1, domain 3 superfamily Clocl_0656 IPR007066 RNA polymerase Rpb1, domain 3 Clocl_0656 IPR007080 RNA polymerase Rpb1, domain 1 Clocl_0656 IPR012754 DNA-directed RNA polymerase, subunit beta-prime Clocl_0656 IPR007081 RNA polymerase Rpb1, domain 5 Clocl_0656 IPR038120 RNA polymerase Rpb1, funnel domain superfamily Clocl_0657 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 Clocl_0657 IPR029064 50S ribosomal protein L30e-like Clocl_0657 IPR000948 Ribosomal protein L7Ae, prokaryotes Clocl_0657 IPR023460 Ribosomal protein L7Ae, putative Clocl_0658 IPR012340 Nucleic acid-binding, OB-fold Clocl_0658 IPR006032 Ribosomal protein S12/S23 Clocl_0658 IPR005679 Ribosomal protein S12, bacterial-type Clocl_0659 IPR023798 Ribosomal protein S7 domain Clocl_0659 IPR036823 Ribosomal protein S7 domain superfamily Clocl_0659 IPR000235 Ribosomal protein S5/S7 Clocl_0659 IPR005717 Ribosomal protein S7, bacterial/organellar-type Clocl_0659 IPR020606 Ribosomal protein S7, conserved site Clocl_0660 IPR035647 EF-G domain III/V-like Clocl_0660 IPR041095 Elongation Factor G, domain II Clocl_0660 IPR009022 Elongation factor G, domain III Clocl_0660 IPR009000 Translation protein, beta-barrel domain superfamily Clocl_0660 IPR000795 Transcription factor, GTP-binding domain Clocl_0660 IPR004540 Translation elongation factor EFG/EF2 Clocl_0660 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0660 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Clocl_0660 IPR020568 Ribosomal protein S5 domain 2-type fold Clocl_0660 IPR031157 Tr-type G domain, conserved site Clocl_0660 IPR004161 Translation elongation factor EFTu-like, domain 2 Clocl_0660 IPR000640 Elongation factor EFG, domain V-like Clocl_0660 IPR005517 Translation elongation factor EFG/EF2, domain IV Clocl_0660 IPR005225 Small GTP-binding protein domain Clocl_0660 IPR035649 EFG, domain V Clocl_0661 IPR009000 Translation protein, beta-barrel domain superfamily Clocl_0661 IPR031157 Tr-type G domain, conserved site Clocl_0661 IPR005225 Small GTP-binding protein domain Clocl_0661 IPR000795 Transcription factor, GTP-binding domain Clocl_0661 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Clocl_0661 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle Clocl_0661 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal Clocl_0661 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain Clocl_0661 IPR004161 Translation elongation factor EFTu-like, domain 2 Clocl_0661 IPR033720 Elongation factor Tu, domain 2 Clocl_0661 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0662 IPR014286 RNA polymerase sigma-70 RpoE type Clocl_0662 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 Clocl_0662 IPR014284 RNA polymerase sigma-70 like domain Clocl_0662 IPR013324 RNA polymerase sigma factor, region 3/4-like Clocl_0662 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site Clocl_0662 IPR007627 RNA polymerase sigma-70 region 2 Clocl_0662 IPR013325 RNA polymerase sigma factor, region 2 Clocl_0662 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_0662 IPR039425 RNA polymerase sigma-70 like Clocl_0665 IPR007391 Vancomycin resistance VanW Clocl_0666 IPR002114 Phosphotransferase system, HPr serine phosphorylation site Clocl_0666 IPR035895 HPr-like superfamily Clocl_0666 IPR000032 Phosphocarrier protein HPr-like Clocl_0667 IPR008279 PEP-utilising enzyme, mobile domain Clocl_0667 IPR000121 PEP-utilising enzyme, C-terminal Clocl_0667 IPR024692 Phosphotransferase system, enzyme I Clocl_0667 IPR018274 PEP-utilising enzyme, active site Clocl_0667 IPR036637 Phosphohistidine domain superfamily Clocl_0667 IPR040442 Pyruvate kinase-like domain superfamily Clocl_0667 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily Clocl_0667 IPR006318 Phosphotransferase system, enzyme I-like Clocl_0667 IPR008731 Phosphotransferase system, enzyme I N-terminal Clocl_0667 IPR023151 PEP-utilising enzyme, conserved site Clocl_0667 IPR036618 PtsI, HPr-binding domain superfamily Clocl_0668 IPR038476 UvrC homology region 2 superfamily Clocl_0668 IPR004791 UvrABC system, subunit C Clocl_0668 IPR036876 UVR domain superfamily Clocl_0668 IPR001943 UVR domain Clocl_0668 IPR010994 RuvA domain 2-like Clocl_0668 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 Clocl_0668 IPR035901 GIY-YIG endonuclease superfamily Clocl_0668 IPR001162 UvrC family homology region Clocl_0668 IPR000305 GIY-YIG endonuclease Clocl_0670 IPR005215 Trigger factor Clocl_0670 IPR037041 Trigger factor, C-terminal domain superfamily Clocl_0670 IPR008881 Trigger factor, ribosome-binding, bacterial Clocl_0670 IPR036611 Trigger factor ribosome-binding domain superfamily Clocl_0670 IPR027304 Trigger factor/SurA domain superfamily Clocl_0670 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain Clocl_0670 IPR008880 Trigger factor, C-terminal Clocl_0671 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA Clocl_0671 IPR018215 ClpP, Ser active site Clocl_0671 IPR001907 ATP-dependent Clp protease proteolytic subunit Clocl_0671 IPR033135 ClpP, histidine active site Clocl_0671 IPR029045 ClpP/crotonase-like domain superfamily Clocl_0672 IPR004487 Clp protease, ATP-binding subunit ClpX Clocl_0672 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0672 IPR003959 ATPase, AAA-type, core Clocl_0672 IPR038366 Zinc finger, ClpX C4-type superfamily Clocl_0672 IPR003593 AAA+ ATPase domain Clocl_0672 IPR019489 Clp ATPase, C-terminal Clocl_0672 IPR010603 Zinc finger, ClpX C4-type Clocl_0674 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0674 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Clocl_0674 IPR003593 AAA+ ATPase domain Clocl_0674 IPR014251 Sporulation protease LonB Clocl_0674 IPR027065 Lon protease Clocl_0674 IPR020568 Ribosomal protein S5 domain 2-type fold Clocl_0674 IPR008268 Peptidase S16, active site Clocl_0674 IPR003959 ATPase, AAA-type, core Clocl_0674 IPR008269 Peptidase S16, Lon proteolytic domain Clocl_0675 IPR017861 Kae1/TsaD family Clocl_0675 IPR000905 Gcp-like domain Clocl_0675 IPR017860 Peptidase M22, conserved site Clocl_0675 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD Clocl_0676 IPR006638 Elp3/MiaB/NifB Clocl_0676 IPR007197 Radical SAM Clocl_0676 IPR010505 Molybdenum cofactor synthesis C-terminal Clocl_0676 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site Clocl_0676 IPR013483 Molybdenum cofactor biosynthesis protein A Clocl_0676 IPR013785 Aldolase-type TIM barrel Clocl_0677 IPR008258 Transglycosylase SLT domain 1 Clocl_0677 IPR000189 Prokaryotic transglycosylase, active site Clocl_0677 IPR023346 Lysozyme-like domain superfamily Clocl_0680 IPR016195 Polymerase/histidinol phosphatase-like Clocl_0680 IPR003141 Polymerase/histidinol phosphatase, N-terminal Clocl_0680 IPR004013 PHP domain Clocl_0682 IPR023620 Small protein B Clocl_0682 IPR000037 SsrA-binding protein Clocl_0682 IPR020081 SsrA-binding protein, conserved site Clocl_0688 IPR003346 Transposase, IS116/IS110/IS902 Clocl_0688 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal Clocl_0698 IPR001387 Cro/C1-type helix-turn-helix domain Clocl_0698 IPR010982 Lambda repressor-like, DNA-binding domain superfamily Clocl_0713 IPR001305 Heat shock protein DnaJ, cysteine-rich domain Clocl_0713 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily Clocl_0713 IPR036869 Chaperone J-domain superfamily Clocl_0713 IPR002939 Chaperone DnaJ, C-terminal Clocl_0713 IPR008971 HSP40/DnaJ peptide-binding Clocl_0713 IPR001623 DnaJ domain Clocl_0713 IPR012724 Chaperone DnaJ Clocl_0713 IPR018253 DnaJ domain, conserved site Clocl_0714 IPR001207 Transposase, mutator type Clocl_0720 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic Clocl_0720 IPR001150 Glycine radical domain Clocl_0720 IPR019777 Formate C-acetyltransferase glycine radical, conserved site Clocl_0720 IPR005144 ATP-cone domain Clocl_0721 IPR013785 Aldolase-type TIM barrel Clocl_0721 IPR012838 Pyruvate formate-lyase 1 activating enzyme Clocl_0721 IPR034465 Pyruvate formate-lyase activase Clocl_0721 IPR001989 Radical-activating enzyme, conserved site Clocl_0721 IPR007197 Radical SAM Clocl_0721 IPR034457 Organic radical-activating enzymes Clocl_0722 IPR030678 Peptide/nickel binding protein, MppA-type Clocl_0722 IPR023765 Solute-binding protein family 5, conserved site Clocl_0722 IPR000914 Solute-binding protein family 5 domain Clocl_0722 IPR039424 Solute-binding protein family 5 Clocl_0723 IPR016381 Signal transduction histidine kinase, DegS Clocl_0723 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain Clocl_0723 IPR008595 Sensor DegS Clocl_0723 IPR005467 Histidine kinase domain Clocl_0723 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clocl_0723 IPR003594 Histidine kinase/HSP90-like ATPase Clocl_0724 IPR000792 Transcription regulator LuxR, C-terminal Clocl_0724 IPR001789 Signal transduction response regulator, receiver domain Clocl_0724 IPR016032 Signal transduction response regulator, C-terminal effector Clocl_0724 IPR011006 CheY-like superfamily Clocl_0727 IPR007344 GrpB/Dephospho-CoA kinase Clocl_0733 IPR000073 Alpha/beta hydrolase fold-1 Clocl_0733 IPR029058 Alpha/Beta hydrolase fold Clocl_0733 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase Clocl_0734 IPR011256 Regulatory factor, effector binding domain superfamily Clocl_0734 IPR018062 HTH domain AraC-type, conserved site Clocl_0734 IPR020449 Transcription regulator HTH, AraC- type Clocl_0734 IPR018060 DNA binding HTH domain, AraC-type Clocl_0734 IPR009057 Homeobox-like domain superfamily Clocl_0734 IPR010499 Bacterial transcription activator, effector binding Clocl_0734 IPR029442 GyrI-like small molecule binding domain Clocl_0742 IPR002052 DNA methylase, N-6 adenine-specific, conserved site Clocl_0742 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD Clocl_0742 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clocl_0742 IPR007848 Methyltransferase small domain Clocl_0743 IPR029052 Metallo-dependent phosphatase-like Clocl_0743 IPR041780 PrpE-like, metallophosphatase domain Clocl_0743 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type Clocl_0743 IPR023937 Bis(5'-nucleosyl)-tetraphosphatase PrpE Clocl_0743 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase Clocl_0752 IPR006419 Nicotinamide mononucleotide transporter PnuC Clocl_0753 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0753 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clocl_0753 IPR041749 NadR, nicotinamide/nicotinate mononucleotide adenylyltransferase domain Clocl_0753 IPR038727 NadR/Ttd14, AAA domain Clocl_0753 IPR001387 Cro/C1-type helix-turn-helix domain Clocl_0753 IPR004821 Cytidyltransferase-like domain Clocl_0753 IPR010982 Lambda repressor-like, DNA-binding domain superfamily Clocl_0753 IPR016429 NAD biosynthesis/regulator protein NadR Clocl_0753 IPR006417 Nicotinamide-nucleotide adenylyltransferase Clocl_0755 IPR012347 Ferritin-like Clocl_0755 IPR009078 Ferritin-like superfamily Clocl_0755 IPR007760 Manganese catalase Clocl_0755 IPR039377 Manganese catalase, ferritin-like di-iron-binding domain Clocl_0758 IPR013785 Aldolase-type TIM barrel Clocl_0758 IPR006638 Elp3/MiaB/NifB Clocl_0758 IPR010722 Biotin and thiamin synthesis-associated domain Clocl_0758 IPR007197 Radical SAM Clocl_0758 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB Clocl_0758 IPR024177 Biotin synthase Clocl_0759 IPR002745 Phosphotransferase KptA/Tpt1 Clocl_0759 IPR042081 RNA 2'-phosphotransferase, C-terminal domain Clocl_0759 IPR022928 RNA 2'-phosphotransferase KptA, putative Clocl_0759 IPR042080 RNA 2'-phosphotransferase, N-terminal domain Clocl_0761 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Clocl_0761 IPR029039 Flavoprotein-like superfamily Clocl_0761 IPR012349 FMN-binding split barrel Clocl_0761 IPR008254 Flavodoxin/nitric oxide synthase Clocl_0761 IPR002563 Flavin reductase like domain Clocl_0761 IPR001279 Metallo-beta-lactamase Clocl_0762 IPR029058 Alpha/Beta hydrolase fold Clocl_0762 IPR000801 Putative esterase Clocl_0763 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Clocl_0763 IPR029151 Periplasmic sensor-like domain superfamily Clocl_0764 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Clocl_0764 IPR029151 Periplasmic sensor-like domain superfamily Clocl_0766 IPR006741 Accessory gene regulator B Clocl_0769 IPR003593 AAA+ ATPase domain Clocl_0769 IPR022501 Gallidermin ABC transporter, ATP-binding subunit Clocl_0769 IPR003439 ABC transporter-like Clocl_0769 IPR017871 ABC transporter, conserved site Clocl_0769 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0772 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_0772 IPR039420 Transcriptional regulatory protein WalR-like Clocl_0772 IPR011006 CheY-like superfamily Clocl_0772 IPR016032 Signal transduction response regulator, C-terminal effector Clocl_0772 IPR001867 OmpR/PhoB-type DNA-binding domain Clocl_0772 IPR001789 Signal transduction response regulator, receiver domain Clocl_0773 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Clocl_0773 IPR035965 PAS domain superfamily Clocl_0773 IPR000700 PAS-associated, C-terminal Clocl_0773 IPR001610 PAC motif Clocl_0773 IPR000014 PAS domain Clocl_0773 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Clocl_0773 IPR005467 Histidine kinase domain Clocl_0773 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clocl_0773 IPR003660 HAMP domain Clocl_0773 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Clocl_0773 IPR003594 Histidine kinase/HSP90-like ATPase Clocl_0776 IPR016192 APOBEC/CMP deaminase, zinc-binding Clocl_0776 IPR002125 Cytidine and deoxycytidylate deaminase domain Clocl_0776 IPR006262 Cytidine deaminase, homotetrameric Clocl_0776 IPR016193 Cytidine deaminase-like Clocl_0777 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain Clocl_0777 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clocl_0777 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily Clocl_0777 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain Clocl_0777 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site Clocl_0777 IPR014261 Sulphite reductase, subunit C Clocl_0777 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clocl_0779 IPR038071 UROD/MetE-like superfamily Clocl_0779 IPR006361 Uroporphyrinogen decarboxylase HemE Clocl_0779 IPR000257 Uroporphyrinogen decarboxylase (URO-D) Clocl_0780 IPR036594 Methionine synthase domain Clocl_0780 IPR012741 Methyltransferase cognate corrinoid protein Clocl_0780 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Clocl_0780 IPR006158 Cobalamin (vitamin B12)-binding domain Clocl_0780 IPR036724 Cobalamin-binding domain superfamily Clocl_0781 IPR020449 Transcription regulator HTH, AraC- type Clocl_0781 IPR018062 HTH domain AraC-type, conserved site Clocl_0781 IPR018060 DNA binding HTH domain, AraC-type Clocl_0781 IPR037923 Transcription regulator HTH-like Clocl_0781 IPR003313 AraC-type arabinose-binding/dimerisation domain Clocl_0781 IPR009057 Homeobox-like domain superfamily Clocl_0782 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal Clocl_0782 IPR003495 CobW/HypB/UreG, nucleotide-binding domain Clocl_0782 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0785 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like Clocl_0785 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal Clocl_0785 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic Clocl_0785 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily Clocl_0787 IPR010982 Lambda repressor-like, DNA-binding domain superfamily Clocl_0787 IPR000843 LacI-type HTH domain Clocl_0787 IPR028082 Periplasmic binding protein-like I Clocl_0788 IPR002139 Ribokinase/fructokinase Clocl_0788 IPR011611 Carbohydrate kinase PfkB Clocl_0788 IPR037171 NagB/RpiA transferase-like Clocl_0788 IPR011877 Ribokinase Clocl_0788 IPR004788 Ribose 5-phosphate isomerase, type A Clocl_0788 IPR029056 Ribokinase-like Clocl_0790 IPR025997 Periplasmic binding protein Clocl_0790 IPR028082 Periplasmic binding protein-like I Clocl_0791 IPR001851 ABC transporter, permease Clocl_0792 IPR003593 AAA+ ATPase domain Clocl_0792 IPR003439 ABC transporter-like Clocl_0792 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0792 IPR015861 ABC transporter, ribose import, RbsA Clocl_0792 IPR017871 ABC transporter, conserved site Clocl_0793 IPR023750 RbsD-like superfamily Clocl_0793 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU Clocl_0793 IPR023064 D-ribose pyranase Clocl_0797 IPR001233 tRNA-splicing ligase, RtcB Clocl_0797 IPR036025 tRNA-splicing ligase RtcB-like superfamily Clocl_0798 IPR018228 Deoxyribonuclease, TatD-related, conserved site Clocl_0798 IPR015991 Uncharacterised hydrolase TatD-type Clocl_0798 IPR032466 Metal-dependent hydrolase Clocl_0798 IPR001130 TatD family Clocl_0799 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Clocl_0799 IPR013471 Ribonuclease Z/BN Clocl_0799 IPR001279 Metallo-beta-lactamase Clocl_0801 IPR007685 RelA/SpoT Clocl_0802 IPR036397 Ribonuclease H superfamily Clocl_0802 IPR001598 Transposase, IS30, conserved site Clocl_0802 IPR025246 Transposase IS30-like HTH domain Clocl_0802 IPR012337 Ribonuclease H-like superfamily Clocl_0802 IPR001584 Integrase, catalytic core Clocl_0803 IPR003593 AAA+ ATPase domain Clocl_0803 IPR011527 ABC transporter type 1, transmembrane domain Clocl_0803 IPR036640 ABC transporter type 1, transmembrane domain superfamily Clocl_0803 IPR003439 ABC transporter-like Clocl_0803 IPR017871 ABC transporter, conserved site Clocl_0803 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0803 IPR039421 Type I protein exporter Clocl_0804 IPR003593 AAA+ ATPase domain Clocl_0804 IPR036640 ABC transporter type 1, transmembrane domain superfamily Clocl_0804 IPR003439 ABC transporter-like Clocl_0804 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0804 IPR039421 Type I protein exporter Clocl_0804 IPR011527 ABC transporter type 1, transmembrane domain Clocl_0806 IPR011254 Prismane-like superfamily Clocl_0806 IPR016099 Prismane-like, alpha/beta-sandwich Clocl_0806 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase Clocl_0806 IPR010047 Ni-containing CO dehydrogenase Clocl_0806 IPR016101 CO dehydrogenase, alpha-bundle Clocl_0808 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Clocl_0808 IPR035906 MetI-like superfamily Clocl_0809 IPR003593 AAA+ ATPase domain Clocl_0809 IPR003439 ABC transporter-like Clocl_0809 IPR017871 ABC transporter, conserved site Clocl_0809 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0809 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB Clocl_0821 IPR008964 Invasin/intimin cell-adhesion fragments Clocl_0821 IPR013783 Immunoglobulin-like fold Clocl_0821 IPR029062 Class I glutamine amidotransferase-like Clocl_0821 IPR003343 Bacterial Ig-like, group 2 Clocl_0825 IPR001207 Transposase, mutator type Clocl_0828 IPR012349 FMN-binding split barrel Clocl_0828 IPR002563 Flavin reductase like domain Clocl_0843 IPR001270 ClpA/B family Clocl_0843 IPR003593 AAA+ ATPase domain Clocl_0843 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein Clocl_0843 IPR002611 IstB-like ATP-binding protein Clocl_0843 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0860 IPR008984 SMAD/FHA domain superfamily Clocl_0860 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0860 IPR023839 Firmicutes EssC, C-terminal Clocl_0860 IPR002543 FtsK domain Clocl_0860 IPR022206 Firmicutes EssC, N-terminal Clocl_0865 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 Clocl_0865 IPR015797 NUDIX hydrolase-like domain superfamily Clocl_0865 IPR000086 NUDIX hydrolase domain Clocl_0866 IPR036239 Prenyltransferase-like superfamily Clocl_0866 IPR020965 Aromatic prenyltransferase, CloQ-type Clocl_0866 IPR033964 Aromatic prenyltransferase Clocl_0867 IPR024706 Peroxiredoxin, AhpC-type Clocl_0867 IPR036249 Thioredoxin-like superfamily Clocl_0867 IPR013766 Thioredoxin domain Clocl_0867 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant Clocl_0867 IPR017559 Alkyl hydroperoxide reductase subunit C Clocl_0868 IPR036249 Thioredoxin-like superfamily Clocl_0868 IPR012081 Alkyl hydroperoxide reductase subunit F Clocl_0868 IPR036188 FAD/NAD(P)-binding domain superfamily Clocl_0868 IPR023753 FAD/NAD(P)-binding domain Clocl_0868 IPR002109 Glutaredoxin Clocl_0868 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site Clocl_0868 IPR012336 Thioredoxin-like fold Clocl_0871 IPR030678 Peptide/nickel binding protein, MppA-type Clocl_0871 IPR000914 Solute-binding protein family 5 domain Clocl_0871 IPR023765 Solute-binding protein family 5, conserved site Clocl_0871 IPR039424 Solute-binding protein family 5 Clocl_0872 IPR003439 ABC transporter-like Clocl_0872 IPR017871 ABC transporter, conserved site Clocl_0872 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal Clocl_0872 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0872 IPR003593 AAA+ ATPase domain Clocl_0873 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0873 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal Clocl_0873 IPR003593 AAA+ ATPase domain Clocl_0873 IPR003439 ABC transporter-like Clocl_0873 IPR017871 ABC transporter, conserved site Clocl_0874 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Clocl_0874 IPR035906 MetI-like superfamily Clocl_0874 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Clocl_0875 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Clocl_0875 IPR035906 MetI-like superfamily Clocl_0877 IPR013766 Thioredoxin domain Clocl_0877 IPR024706 Peroxiredoxin, AhpC-type Clocl_0877 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant Clocl_0877 IPR017559 Alkyl hydroperoxide reductase subunit C Clocl_0877 IPR036249 Thioredoxin-like superfamily Clocl_0891 IPR000477 Reverse transcriptase domain Clocl_0891 IPR024937 Domain X Clocl_0895 IPR008878 Transposase IS66, Orf2 Clocl_0896 IPR002514 Transposase IS3/IS911family Clocl_0896 IPR009057 Homeobox-like domain superfamily Clocl_0901 IPR005084 Carbohydrate binding module family 6 Clocl_0901 IPR022790 Glycosyl hydrolase family 26 domain Clocl_0901 IPR000805 Glycoside hydrolase family 26 Clocl_0901 IPR017853 Glycoside hydrolase superfamily Clocl_0901 IPR008979 Galactose-binding-like domain superfamily Clocl_0901 IPR026444 Secretion system C-terminal sorting domain Clocl_0905 IPR002937 Amine oxidase Clocl_0905 IPR036188 FAD/NAD(P)-binding domain superfamily Clocl_0906 IPR015943 WD40/YVTN repeat-like-containing domain superfamily Clocl_0906 IPR018247 EF-Hand 1, calcium-binding site Clocl_0906 IPR036439 Dockerin domain superfamily Clocl_0906 IPR016134 Dockerin domain Clocl_0906 IPR002105 Dockerin type I repeat Clocl_0907 IPR001150 Glycine radical domain Clocl_0907 IPR019777 Formate C-acetyltransferase glycine radical, conserved site Clocl_0907 IPR005949 Formate acetyltransferase Clocl_0907 IPR004184 Pyruvate formate lyase domain Clocl_0908 IPR012838 Pyruvate formate-lyase 1 activating enzyme Clocl_0908 IPR013785 Aldolase-type TIM barrel Clocl_0908 IPR007197 Radical SAM Clocl_0908 IPR001989 Radical-activating enzyme, conserved site Clocl_0908 IPR034465 Pyruvate formate-lyase activase Clocl_0908 IPR034457 Organic radical-activating enzymes Clocl_0908 IPR012839 Organic radical enzyme activase Clocl_0909 IPR024002 Formate/nitrite transporter, conserved site Clocl_0909 IPR000292 Formate/nitrite transporter Clocl_0909 IPR023271 Aquaporin-like Clocl_0909 IPR023999 Formate transporter FocA, putative Clocl_0911 IPR030389 FeoB-type guanine nucleotide-binding (G) domain Clocl_0911 IPR041069 FeoB, cytosolic helical domain Clocl_0911 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0911 IPR011640 Ferrous iron transport protein B, C-terminal Clocl_0911 IPR006073 GTP binding domain Clocl_0911 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Clocl_0911 IPR003373 Ferrous iron transport protein B Clocl_0912 IPR003689 Zinc/iron permease Clocl_0912 IPR023498 Zinc transporter ZupT Clocl_0914 IPR009078 Ferritin-like superfamily Clocl_0914 IPR024934 Rubredoxin-like domain Clocl_0914 IPR003251 Rubrerythrin Clocl_0914 IPR012347 Ferritin-like Clocl_0914 IPR009040 Ferritin-like diiron domain Clocl_0917 IPR011254 Prismane-like superfamily Clocl_0917 IPR010048 Hydroxylamine reductase Clocl_0917 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase Clocl_0917 IPR016100 Prismane, alpha-bundle Clocl_0917 IPR016099 Prismane-like, alpha/beta-sandwich Clocl_0919 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent Clocl_0919 IPR013785 Aldolase-type TIM barrel Clocl_0919 IPR037396 FMN hydroxy acid dehydrogenase domain Clocl_0919 IPR000262 FMN-dependent dehydrogenase Clocl_0919 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site Clocl_0923 IPR008979 Galactose-binding-like domain superfamily Clocl_0923 IPR005084 Carbohydrate binding module family 6 Clocl_0923 IPR028829 Exo-beta-D-glucosaminidase Clocl_0923 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich Clocl_0923 IPR006104 Glycosyl hydrolases family 2, sugar binding domain Clocl_0923 IPR017853 Glycoside hydrolase superfamily Clocl_0923 IPR013783 Immunoglobulin-like fold Clocl_0923 IPR041351 Exo-beta-D-glucosaminidase, Ig-fold domain Clocl_0923 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily Clocl_0924 IPR029493 RecD helicase-like helix-hairpin-helix domain Clocl_0924 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0924 IPR041451 RecD-like DNA helicase, SH3 domain Clocl_0924 IPR003593 AAA+ ATPase domain Clocl_0924 IPR027785 UvrD-like helicase C-terminal domain Clocl_0924 IPR006345 RecD-like DNA helicase Clocl_0925 IPR014710 RmlC-like jelly roll fold Clocl_0925 IPR011051 RmlC-like cupin domain superfamily Clocl_0925 IPR013096 Cupin 2, conserved barrel Clocl_0928 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA Clocl_0928 IPR018211 Alcohol dehydrogenase, iron-type, conserved site Clocl_0929 IPR036291 NAD(P)-binding domain superfamily Clocl_0929 IPR013131 Mannitol dehydrogenase, N-terminal Clocl_0929 IPR013118 Mannitol dehydrogenase, C-terminal Clocl_0929 IPR013328 6-phosphogluconate dehydrogenase, domain 2 Clocl_0929 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily Clocl_0930 IPR017853 Glycoside hydrolase superfamily Clocl_0930 IPR011100 Glycosyl hydrolase family 67, catalytic domain Clocl_0930 IPR011099 Glycosyl hydrolase family 67, C-terminal Clocl_0930 IPR005154 Alpha glucuronidase, N-terminal Clocl_0930 IPR011395 Alpha glucuronidase Clocl_0930 IPR037054 Alpha-glucuronidase, C-terminal domain superfamily Clocl_0930 IPR029018 Beta-hexosaminidase-like, domain 2 Clocl_0932 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Clocl_0932 IPR029151 Periplasmic sensor-like domain superfamily Clocl_0933 IPR029787 Nucleotide cyclase Clocl_0933 IPR005330 MHYT domain Clocl_0933 IPR000160 GGDEF domain Clocl_0933 IPR035919 EAL domain superfamily Clocl_0933 IPR001633 EAL domain Clocl_0934 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_0934 IPR036390 Winged helix DNA-binding domain superfamily Clocl_0934 IPR002481 Ferric-uptake regulator Clocl_0936 IPR010087 Flavodoxin, short chain Clocl_0936 IPR029039 Flavoprotein-like superfamily Clocl_0936 IPR001226 Flavodoxin, conserved site Clocl_0936 IPR008254 Flavodoxin/nitric oxide synthase Clocl_0938 IPR000873 AMP-dependent synthetase/ligase Clocl_0938 IPR020845 AMP-binding, conserved site Clocl_0938 IPR025110 AMP-binding enzyme, C-terminal domain Clocl_0943 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 Clocl_0943 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site Clocl_0943 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial Clocl_0943 IPR000924 Glutamyl/glutaminyl-tRNA synthetase Clocl_0943 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain Clocl_0943 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clocl_0943 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding Clocl_0948 IPR014173 Peptidase C11, Clostripain Clostridium species Clocl_0948 IPR005077 Peptidase C11, clostripain Clocl_0951 IPR001501 Nickel-dependent hydrogenase, large subunit Clocl_0951 IPR029014 [NiFe]-hydrogenase, large subunit Clocl_0951 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site Clocl_0952 IPR004613 Ribonuclease J Clocl_0952 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain Clocl_0952 IPR030854 Ribonuclease J, bacteria Clocl_0952 IPR001587 Ribonuclease J, conserved site Clocl_0952 IPR041636 Ribonuclease J, C-terminal Clocl_0952 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Clocl_0952 IPR042173 Ribonuclease J, domain 2 Clocl_0952 IPR001279 Metallo-beta-lactamase Clocl_0953 IPR023214 HAD superfamily Clocl_0953 IPR041492 Haloacid dehalogenase-like hydrolase Clocl_0953 IPR036412 HAD-like superfamily Clocl_0953 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Clocl_0956 IPR012156 Cold shock, CspA Clocl_0956 IPR011129 Cold shock domain Clocl_0956 IPR019844 Cold-shock (CSD) domain Clocl_0956 IPR012340 Nucleic acid-binding, OB-fold Clocl_0956 IPR002059 Cold-shock protein, DNA-binding Clocl_0957 IPR009665 Protein of unknown function DUF1256 Clocl_0957 IPR023430 Peptidase HybD-like domain superfamily Clocl_0958 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC Clocl_0958 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily Clocl_0958 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain Clocl_0959 IPR022272 Lipocalin family conserved site Clocl_0959 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type Clocl_0959 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clocl_0965 IPR004131 Pyrophosphate-energised proton pump Clocl_0966 IPR001926 Pyridoxal-phosphate dependent enzyme Clocl_0966 IPR006653 Tryptophan synthase, beta chain, conserved site Clocl_0966 IPR023026 Tryptophan synthase beta chain/beta chain-like Clocl_0966 IPR006654 Tryptophan synthase, beta chain Clocl_0966 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Clocl_0967 IPR011060 Ribulose-phosphate binding barrel Clocl_0967 IPR018204 Tryptophan synthase, alpha chain, active site Clocl_0967 IPR002028 Tryptophan synthase, alpha chain Clocl_0967 IPR013785 Aldolase-type TIM barrel Clocl_0969 IPR001387 Cro/C1-type helix-turn-helix domain Clocl_0969 IPR031807 HicB-like antitoxin of toxin-antitoxin system Clocl_0969 IPR010982 Lambda repressor-like, DNA-binding domain superfamily Clocl_0969 IPR035069 TTHA1013/TTHA0281-like Clocl_0971 IPR036318 FAD-binding, type PCMH-like superfamily Clocl_0971 IPR000644 CBS domain Clocl_0971 IPR002550 CNNM, transmembrane domain Clocl_0971 IPR005170 Transporter-associated domain Clocl_0971 IPR016169 FAD-binding, type PCMH, subdomain 2 Clocl_0973 IPR039315 Chemotaxis protein CheW Clocl_0973 IPR002545 CheW-like domain Clocl_0973 IPR036061 CheW-like domain superfamily Clocl_0974 IPR003660 HAMP domain Clocl_0974 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain Clocl_0974 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Clocl_0974 IPR004090 Chemotaxis methyl-accepting receptor Clocl_0975 IPR005748 DNA mismatch repair protein MutS Clocl_0975 IPR007695 DNA mismatch repair protein MutS-like, N-terminal Clocl_0975 IPR000432 DNA mismatch repair protein MutS, C-terminal Clocl_0975 IPR007861 DNA mismatch repair protein MutS, clamp Clocl_0975 IPR016151 DNA mismatch repair protein MutS, N-terminal Clocl_0975 IPR036187 DNA mismatch repair protein MutS, core domain superfamily Clocl_0975 IPR007860 DNA mismatch repair protein MutS, connector domain Clocl_0975 IPR036678 MutS, connector domain superfamily Clocl_0975 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0975 IPR017261 DNA mismatch repair protein MutS/MSH Clocl_0975 IPR007696 DNA mismatch repair protein MutS, core Clocl_0976 IPR016151 DNA mismatch repair protein MutS, N-terminal Clocl_0976 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0976 IPR036678 MutS, connector domain superfamily Clocl_0976 IPR007860 DNA mismatch repair protein MutS, connector domain Clocl_0976 IPR036187 DNA mismatch repair protein MutS, core domain superfamily Clocl_0976 IPR005748 DNA mismatch repair protein MutS Clocl_0976 IPR007695 DNA mismatch repair protein MutS-like, N-terminal Clocl_0976 IPR017261 DNA mismatch repair protein MutS/MSH Clocl_0976 IPR000432 DNA mismatch repair protein MutS, C-terminal Clocl_0976 IPR007861 DNA mismatch repair protein MutS, clamp Clocl_0976 IPR007696 DNA mismatch repair protein MutS, core Clocl_0977 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Clocl_0977 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Clocl_0977 IPR025383 Domain of unknown function DUF4040 Clocl_0977 IPR007182 Na+/H+ antiporter MnhB subunit-related protein Clocl_0977 IPR005663 Monovalent cation proton antiporter subunit A Clocl_0977 IPR005281 Monovalent cation:proton antiporter, subunit B Clocl_0978 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site Clocl_0978 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H Clocl_0979 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit Clocl_0979 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit Clocl_0981 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site Clocl_0981 IPR001501 Nickel-dependent hydrogenase, large subunit Clocl_0981 IPR029014 [NiFe]-hydrogenase, large subunit Clocl_0981 IPR001135 NADH-quinone oxidoreductase, subunit D Clocl_0981 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Clocl_0981 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Clocl_0981 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit Clocl_0983 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site Clocl_0983 IPR000688 Hydrogenase maturation factor HypA/HybF Clocl_0984 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_0984 IPR003593 AAA+ ATPase domain Clocl_0984 IPR003495 CobW/HypB/UreG, nucleotide-binding domain Clocl_0984 IPR004392 Hydrogenase maturation factor HypB Clocl_0985 IPR001792 Acylphosphatase-like domain Clocl_0985 IPR036046 Acylphosphatase-like domain superfamily Clocl_0985 IPR017968 Acylphosphatase, conserved site Clocl_0985 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Clocl_0985 IPR006070 YrdC-like domain Clocl_0985 IPR011125 Zinc finger, HypF-type Clocl_0985 IPR004421 Carbamoyltransferase, HypF-type Clocl_0985 IPR041440 HypF, Kae1-like domain Clocl_0987 IPR042244 HypD, domain 1 Clocl_0987 IPR042243 HypD, domain 2 Clocl_0987 IPR002780 Hydrogenase formation HypD protein Clocl_0988 IPR036921 PurM-like, N-terminal domain superfamily Clocl_0988 IPR016188 PurM-like, N-terminal domain Clocl_0988 IPR036676 PurM-like, C-terminal domain superfamily Clocl_0988 IPR010918 PurM-like, C-terminal domain Clocl_0988 IPR011854 Carbamoyl dehydratase HypE Clocl_0989 IPR020084 NUDIX hydrolase, conserved site Clocl_0989 IPR015797 NUDIX hydrolase-like domain superfamily Clocl_0989 IPR000086 NUDIX hydrolase domain Clocl_0989 IPR020476 NUDIX hydrolase Clocl_0991 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal Clocl_0991 IPR007229 Nicotinate phosphoribosyltransferase family Clocl_0991 IPR041619 Nicotinate phosphoribosyltransferase C-terminal domain Clocl_0991 IPR013785 Aldolase-type TIM barrel Clocl_0991 IPR006405 Nicotinate phosphoribosyltransferase pncB-type Clocl_0991 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain Clocl_0991 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase Clocl_0992 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal Clocl_0992 IPR035078 Phosphoenolpyruvate carboxykinase, GTP-utilising, N-terminal Clocl_0992 IPR035077 Phosphoenolpyruvate carboxykinase, C-terminal P-loop domain Clocl_0992 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising Clocl_0992 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal Clocl_0992 IPR018091 Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site Clocl_0994 IPR020916 Protein-glutamine gamma-glutamyltransferase, bacteria Clocl_0996 IPR006654 Tryptophan synthase, beta chain Clocl_0996 IPR023026 Tryptophan synthase beta chain/beta chain-like Clocl_0996 IPR001926 Pyridoxal-phosphate dependent enzyme Clocl_0996 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Clocl_0996 IPR006653 Tryptophan synthase, beta chain, conserved site Clocl_0997 IPR014224 Spore cortex-lytic enzyme SleB Clocl_0997 IPR011105 Cell wall hydrolase, SleB Clocl_0997 IPR002477 Peptidoglycan binding-like Clocl_0997 IPR036365 PGBD-like superfamily Clocl_0997 IPR042047 Cell wall hydrolase SleB, domain 1 Clocl_0997 IPR036366 PGBD superfamily Clocl_0998 IPR006129 Adhesin B Clocl_0998 IPR006127 Periplasmic solute binding protein, ZnuA-like Clocl_0998 IPR006128 Adhesion lipoprotein Clocl_0999 IPR003593 AAA+ ATPase domain Clocl_0999 IPR003439 ABC transporter-like Clocl_0999 IPR017871 ABC transporter, conserved site Clocl_0999 IPR017882 Zinc import ATP-binding protein ZnuC Clocl_0999 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_1000 IPR001626 ABC transporter, TroCD-like Clocl_1000 IPR037294 ABC transporter, BtuC-like Clocl_1002 IPR003439 ABC transporter-like Clocl_1002 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_1002 IPR003593 AAA+ ATPase domain Clocl_1004 IPR016195 Polymerase/histidinol phosphatase-like Clocl_1004 IPR016667 Capsular polysaccharide synthesis, CpsB/CapC Clocl_1005 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_1005 IPR025669 AAA domain Clocl_1005 IPR005702 Exopolysaccharide synthesis protein Clocl_1008 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain Clocl_1008 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clocl_1008 IPR036291 NAD(P)-binding domain superfamily Clocl_1010 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase Clocl_1010 IPR036291 NAD(P)-binding domain superfamily Clocl_1010 IPR020904 Short-chain dehydrogenase/reductase, conserved site Clocl_1010 IPR002347 Short-chain dehydrogenase/reductase SDR Clocl_1011 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase Clocl_1011 IPR003362 Bacterial sugar transferase Clocl_1012 IPR005474 Transketolase, N-terminal Clocl_1012 IPR029061 Thiamin diphosphate-binding fold Clocl_1013 IPR033248 Transketolase, C-terminal domain Clocl_1013 IPR029061 Thiamin diphosphate-binding fold Clocl_1013 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II Clocl_1013 IPR005475 Transketolase-like, pyrimidine-binding domain Clocl_1014 IPR001173 Glycosyltransferase 2-like Clocl_1014 IPR029044 Nucleotide-diphospho-sugar transferases Clocl_1015 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation Clocl_1015 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal Clocl_1015 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily Clocl_1015 IPR036291 NAD(P)-binding domain superfamily Clocl_1015 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type Clocl_1015 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal Clocl_1015 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Clocl_1015 IPR017476 UDP-glucose/GDP-mannose dehydrogenase Clocl_1018 IPR007074 LicD family Clocl_1019 IPR029044 Nucleotide-diphospho-sugar transferases Clocl_1019 IPR005835 Nucleotidyl transferase domain Clocl_1020 IPR013692 UDP-glucose 4-epimerase CapD, C-terminal domain Clocl_1020 IPR036291 NAD(P)-binding domain superfamily Clocl_1020 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain Clocl_1021 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Clocl_1021 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Clocl_1021 IPR015424 Pyridoxal phosphate-dependent transferase Clocl_1021 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase Clocl_1022 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Clocl_1022 IPR015424 Pyridoxal phosphate-dependent transferase Clocl_1022 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase Clocl_1022 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Clocl_1024 IPR001173 Glycosyltransferase 2-like Clocl_1024 IPR029044 Nucleotide-diphospho-sugar transferases Clocl_1024 IPR002495 Glycosyl transferase, family 8 Clocl_1027 IPR036291 NAD(P)-binding domain superfamily Clocl_1027 IPR020904 Short-chain dehydrogenase/reductase, conserved site Clocl_1027 IPR002347 Short-chain dehydrogenase/reductase SDR Clocl_1027 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase Clocl_1028 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clocl_1028 IPR015413 Methionyl/Leucyl tRNA synthetase Clocl_1028 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding Clocl_1028 IPR025709 Leucyl-tRNA synthetase, editing domain Clocl_1028 IPR002302 Leucine-tRNA ligase Clocl_1028 IPR002300 Aminoacyl-tRNA synthetase, class Ia Clocl_1028 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site Clocl_1028 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain Clocl_1028 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding Clocl_1031 IPR010982 Lambda repressor-like, DNA-binding domain superfamily Clocl_1031 IPR028082 Periplasmic binding protein-like I Clocl_1031 IPR000843 LacI-type HTH domain Clocl_1032 IPR025403 Domain of unknown function DUF4129 Clocl_1032 IPR038765 Papain-like cysteine peptidase superfamily Clocl_1032 IPR021878 Protein-glutamine gamma-glutamyltransferase TgpA, N-terminal Clocl_1032 IPR002931 Transglutaminase-like Clocl_1034 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_1034 IPR041628 ChlI/MoxR, AAA lid domain Clocl_1034 IPR011703 ATPase, AAA-3 Clocl_1038 IPR001387 Cro/C1-type helix-turn-helix domain Clocl_1038 IPR010982 Lambda repressor-like, DNA-binding domain superfamily Clocl_1039 IPR002528 Multi antimicrobial extrusion protein Clocl_1040 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_1040 IPR017871 ABC transporter, conserved site Clocl_1040 IPR003593 AAA+ ATPase domain Clocl_1040 IPR003439 ABC transporter-like Clocl_1040 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB Clocl_1041 IPR015168 SsuA/THI5-like Clocl_1041 IPR027939 NMT1/THI5 family Clocl_1042 IPR035906 MetI-like superfamily Clocl_1042 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Clocl_1043 IPR002767 Thiamine-binding protein Clocl_1043 IPR029756 MTH1187/YkoF-like Clocl_1044 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clocl_1044 IPR002102 Cellulosome anchoring protein, cohesin domain Clocl_1044 IPR001119 S-layer homology domain Clocl_1046 IPR016163 Aldehyde dehydrogenase, C-terminal Clocl_1046 IPR016162 Aldehyde dehydrogenase, N-terminal Clocl_1046 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site Clocl_1046 IPR012134 Glutamate-5-semialdehyde dehydrogenase Clocl_1046 IPR000965 GPR domain Clocl_1046 IPR016161 Aldehyde/histidinol dehydrogenase Clocl_1046 IPR015590 Aldehyde dehydrogenase domain Clocl_1047 IPR017853 Glycoside hydrolase superfamily Clocl_1047 IPR037461 CtCE2-like domain Clocl_1047 IPR002105 Dockerin type I repeat Clocl_1047 IPR016134 Dockerin domain Clocl_1047 IPR036514 SGNH hydrolase superfamily Clocl_1047 IPR040794 Carbohydrate esterase 2, N-terminal Clocl_1047 IPR001087 GDSL lipase/esterase Clocl_1047 IPR001547 Glycoside hydrolase, family 5 Clocl_1047 IPR008979 Galactose-binding-like domain superfamily Clocl_1047 IPR018087 Glycoside hydrolase, family 5, conserved site Clocl_1047 IPR036439 Dockerin domain superfamily Clocl_1048 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site Clocl_1048 IPR002300 Aminoacyl-tRNA synthetase, class Ia Clocl_1048 IPR033709 Isoleucyl tRNA synthetase type 2, anticodon-binding domain Clocl_1048 IPR002301 Isoleucine-tRNA ligase Clocl_1048 IPR023586 Isoleucine-tRNA ligase, type 2 Clocl_1048 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding Clocl_1048 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clocl_1048 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding Clocl_1048 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain Clocl_1049 IPR033721 Prolyl-tRNA synthetase, catalytic domain Clocl_1049 IPR017449 Prolyl-tRNA synthetase, class II Clocl_1049 IPR004499 Proline-tRNA ligase, class IIa, archaeal-type Clocl_1049 IPR002316 Proline-tRNA ligase, class IIa Clocl_1049 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) Clocl_1049 IPR006195 Aminoacyl-tRNA synthetase, class II Clocl_1049 IPR004154 Anticodon-binding Clocl_1049 IPR016061 Proline-tRNA ligase, class II, C-terminal Clocl_1049 IPR036621 Anticodon-binding domain superfamily Clocl_1050 IPR033469 CYTH-like domain superfamily Clocl_1050 IPR023577 CYTH domain Clocl_1050 IPR012042 Inorganic triphosphatase NeuTTM/CthTTM-like Clocl_1053 IPR036966 Carbohydrate-binding module 3 superfamily Clocl_1053 IPR001956 Carbohydrate-binding module 3 Clocl_1053 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clocl_1053 IPR024449 Anti-sigma factor RsgI, N-terminal Clocl_1054 IPR014244 RNA polymerase sigma-I type Clocl_1054 IPR013325 RNA polymerase sigma factor, region 2 Clocl_1055 IPR019834 Glycoside hydrolase, family 8, conserved site Clocl_1055 IPR036439 Dockerin domain superfamily Clocl_1055 IPR018247 EF-Hand 1, calcium-binding site Clocl_1055 IPR008928 Six-hairpin glycosidase superfamily Clocl_1055 IPR002105 Dockerin type I repeat Clocl_1055 IPR016134 Dockerin domain Clocl_1055 IPR002037 Glycoside hydrolase, family 8 Clocl_1055 IPR012341 Six-hairpin glycosidase-like superfamily Clocl_1056 IPR002105 Dockerin type I repeat Clocl_1056 IPR008928 Six-hairpin glycosidase superfamily Clocl_1056 IPR012341 Six-hairpin glycosidase-like superfamily Clocl_1056 IPR036966 Carbohydrate-binding module 3 superfamily Clocl_1056 IPR001956 Carbohydrate-binding module 3 Clocl_1056 IPR018221 Glycoside hydrolase family 9, His active site Clocl_1056 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clocl_1056 IPR001701 Glycoside hydrolase family 9 Clocl_1056 IPR018247 EF-Hand 1, calcium-binding site Clocl_1056 IPR036439 Dockerin domain superfamily Clocl_1056 IPR016134 Dockerin domain Clocl_1056 IPR033126 Glycosyl hydrolases family 9, Asp/Glu active sites Clocl_1057 IPR012338 Beta-lactamase/transpeptidase-like Clocl_1057 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A Clocl_1057 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal Clocl_1057 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily Clocl_1057 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal Clocl_1057 IPR015956 Penicillin-binding protein, C-terminal domain superfamily Clocl_1058 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant Clocl_1058 IPR024706 Peroxiredoxin, AhpC-type Clocl_1058 IPR022915 Peroxiredoxin, TDXH subfamily Clocl_1058 IPR036249 Thioredoxin-like superfamily Clocl_1058 IPR013766 Thioredoxin domain Clocl_1058 IPR019479 Peroxiredoxin, C-terminal Clocl_1059 IPR001789 Signal transduction response regulator, receiver domain Clocl_1059 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_1059 IPR039420 Transcriptional regulatory protein WalR-like Clocl_1059 IPR011006 CheY-like superfamily Clocl_1059 IPR001867 OmpR/PhoB-type DNA-binding domain Clocl_1064 IPR000983 Bacterial general secretion pathway protein G-type pilin Clocl_1064 IPR012902 Prokaryotic N-terminal methylation site Clocl_1064 IPR001082 Fimbrial protein pilin Clocl_1066 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic Clocl_1066 IPR009165 S-adenosylmethionine decarboxylase, bacterial Clocl_1066 IPR016067 S-adenosylmethionine decarboxylase, core Clocl_1067 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Clocl_1067 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Clocl_1067 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 Clocl_1067 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain Clocl_1067 IPR036291 NAD(P)-binding domain superfamily Clocl_1068 IPR019614 S-adenosylmethionine-dependent methyltransferase Clocl_1068 IPR004114 THUMP domain Clocl_1068 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clocl_1068 IPR002052 DNA methylase, N-6 adenine-specific, conserved site Clocl_1068 IPR017244 Ribosomal RNA large subunit methyltransferase K/L Clocl_1068 IPR000241 Putative RNA methylase domain Clocl_1069 IPR020103 Pseudouridine synthase, catalytic domain superfamily Clocl_1069 IPR006225 Pseudouridine synthase, RluC/RluD Clocl_1069 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site Clocl_1069 IPR006145 Pseudouridine synthase, RsuA/RluA Clocl_1069 IPR002942 RNA-binding S4 domain Clocl_1069 IPR036986 RNA-binding S4 domain superfamily Clocl_1071 IPR011625 Alpha-2-macroglobulin, bait region domain Clocl_1071 IPR041246 Bacterial alpha-2-macroglobulin MG10 domain Clocl_1071 IPR001599 Alpha-2-macroglobulin Clocl_1071 IPR002890 Macroglobulin domain Clocl_1071 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid Clocl_1072 IPR014284 RNA polymerase sigma-70 like domain Clocl_1072 IPR039425 RNA polymerase sigma-70 like Clocl_1072 IPR013324 RNA polymerase sigma factor, region 3/4-like Clocl_1072 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_1072 IPR013325 RNA polymerase sigma factor, region 2 Clocl_1072 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 Clocl_1072 IPR007627 RNA polymerase sigma-70 region 2 Clocl_1072 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site Clocl_1072 IPR014294 RNA polymerase sigma-W, bacillaceae Clocl_1073 IPR001296 Glycosyl transferase, family 1 Clocl_1073 IPR011835 Bacterial/plant glycogen synthase Clocl_1073 IPR013534 Starch synthase, catalytic domain Clocl_1074 IPR023210 NADP-dependent oxidoreductase domain Clocl_1074 IPR036812 NADP-dependent oxidoreductase domain superfamily Clocl_1077 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site Clocl_1077 IPR004790 Isocitrate dehydrogenase NADP-dependent Clocl_1077 IPR024084 Isopropylmalate dehydrogenase-like domain Clocl_1078 IPR020103 Pseudouridine synthase, catalytic domain superfamily Clocl_1078 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain Clocl_1078 IPR001406 Pseudouridine synthase I, TruA Clocl_1078 IPR020095 Pseudouridine synthase I, TruA, C-terminal Clocl_1079 IPR011116 SecA Wing/Scaffold Clocl_1079 IPR004027 SEC-C motif Clocl_1079 IPR000185 Protein translocase subunit SecA Clocl_1079 IPR036670 SecA, preprotein cross-linking domain superfamily Clocl_1079 IPR036266 SecA, Wing/Scaffold superfamily Clocl_1079 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_1079 IPR011130 SecA, preprotein cross-linking domain Clocl_1079 IPR014018 SecA motor DEAD Clocl_1079 IPR011115 SecA DEAD-like, N-terminal Clocl_1079 IPR020937 SecA conserved site Clocl_1081 IPR000917 Sulfatase, N-terminal Clocl_1081 IPR012160 Lipoteichoic acid synthase-like Clocl_1081 IPR017850 Alkaline-phosphatase-like, core domain superfamily Clocl_1087 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase Clocl_1087 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site Clocl_1087 IPR029000 Cyclophilin-like domain superfamily Clocl_1087 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain Clocl_1088 IPR006195 Aminoacyl-tRNA synthetase, class II Clocl_1088 IPR004618 Aspartate--ammonia ligase Clocl_1089 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type Clocl_1089 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) Clocl_1089 IPR006195 Aminoacyl-tRNA synthetase, class II Clocl_1089 IPR004522 Asparagine-tRNA ligase Clocl_1089 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb Clocl_1089 IPR012340 Nucleic acid-binding, OB-fold Clocl_1090 IPR015806 Pyruvate kinase, insert domain superfamily Clocl_1090 IPR036918 Pyruvate kinase, C-terminal domain superfamily Clocl_1090 IPR001697 Pyruvate kinase Clocl_1090 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily Clocl_1090 IPR011037 Pyruvate kinase-like, insert domain superfamily Clocl_1090 IPR018209 Pyruvate kinase, active site Clocl_1090 IPR015793 Pyruvate kinase, barrel Clocl_1090 IPR015795 Pyruvate kinase, C-terminal Clocl_1090 IPR036637 Phosphohistidine domain superfamily Clocl_1090 IPR008279 PEP-utilising enzyme, mobile domain Clocl_1090 IPR040442 Pyruvate kinase-like domain superfamily Clocl_1091 IPR004808 AP endonuclease 1 Clocl_1091 IPR020847 AP endonuclease 1, binding site Clocl_1091 IPR020848 AP endonuclease 1, conserved site Clocl_1091 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Clocl_1091 IPR005135 Endonuclease/exonuclease/phosphatase Clocl_1093 IPR007168 Phage shock protein, PspC, N-terminal Clocl_1095 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Clocl_1095 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Clocl_1095 IPR013767 PAS fold Clocl_1095 IPR035965 PAS domain superfamily Clocl_1095 IPR000014 PAS domain Clocl_1095 IPR041328 ResE, histidine kinase sensor domain Clocl_1095 IPR005467 Histidine kinase domain Clocl_1095 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Clocl_1095 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clocl_1095 IPR003594 Histidine kinase/HSP90-like ATPase Clocl_1095 IPR003660 HAMP domain Clocl_1096 IPR001789 Signal transduction response regulator, receiver domain Clocl_1096 IPR011006 CheY-like superfamily Clocl_1097 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clocl_1097 IPR036641 HPT domain superfamily Clocl_1097 IPR005467 Histidine kinase domain Clocl_1097 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Clocl_1097 IPR003594 Histidine kinase/HSP90-like ATPase Clocl_1097 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Clocl_1097 IPR035891 CheY-binding domain of CheA Clocl_1097 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Clocl_1097 IPR036061 CheW-like domain superfamily Clocl_1097 IPR010808 Chemotaxis protein CheA, P2 response regulator-binding Clocl_1097 IPR002545 CheW-like domain Clocl_1097 IPR037052 Chemotaxis protein CheA, P2 response regulator-binding domain superfamily Clocl_1097 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily Clocl_1097 IPR004105 Histidine kinase CheA-like, homodimeric domain Clocl_1102 IPR036061 CheW-like domain superfamily Clocl_1102 IPR002545 CheW-like domain Clocl_1102 IPR039315 Chemotaxis protein CheW Clocl_1103 IPR002813 Arginine biosynthesis protein ArgJ Clocl_1103 IPR016117 ArgJ-like domain superfamily Clocl_1103 IPR042195 ArgJ beta chain, C-terminal domain Clocl_1104 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_1104 IPR020568 Ribosomal protein S5 domain 2-type fold Clocl_1104 IPR015947 PUA-like superfamily Clocl_1104 IPR008268 Peptidase S16, active site Clocl_1104 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Clocl_1104 IPR003111 Lon, substrate-binding domain Clocl_1104 IPR004815 Lon protease, bacterial/eukaryotic-type Clocl_1104 IPR008269 Peptidase S16, Lon proteolytic domain Clocl_1104 IPR027543 Lon protease, bacterial Clocl_1104 IPR003959 ATPase, AAA-type, core Clocl_1104 IPR003593 AAA+ ATPase domain Clocl_1104 IPR027065 Lon protease Clocl_1109 IPR038471 MecA, C-terminal domain superfamily Clocl_1109 IPR008681 Negative regulator of genetic competence, MecA Clocl_1111 IPR029001 Inosine triphosphate pyrophosphatase-like Clocl_1111 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein Clocl_1112 IPR004753 Cell shape determining protein MreB Clocl_1113 IPR007221 Rod shape-determining protein MreC Clocl_1113 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 Clocl_1113 IPR042177 Cell/Rod shape-determining protein MreC, domain 1 Clocl_1115 IPR012338 Beta-lactamase/transpeptidase-like Clocl_1115 IPR005311 Penicillin-binding protein, dimerisation domain Clocl_1115 IPR036138 Penicillin-binding protein, dimerisation domain superfamily Clocl_1115 IPR001460 Penicillin-binding protein, transpeptidase Clocl_1115 IPR017790 Penicillin-binding protein 2 Clocl_1116 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal Clocl_1116 IPR013033 Septum formation inhibitor MinC Clocl_1116 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily Clocl_1116 IPR005526 Septum formation inhibitor MinC, C-terminal Clocl_1117 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Clocl_1117 IPR010223 ATP binding protein MinD, bacterial-type Clocl_1117 IPR025501 ATP binding protein MinD Clocl_1117 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_1118 IPR005527 Cell division topological specificity factor MinE Clocl_1118 IPR036707 Cell division topological specificity factor MinE superfamily Clocl_1119 IPR036914 Methylglyoxal synthase-like domain superfamily Clocl_1119 IPR011607 Methylglyoxal synthase-like domain Clocl_1119 IPR004363 Methylglyoxal synthase Clocl_1119 IPR018148 Methylglyoxal synthase, active site Clocl_1120 IPR011055 Duplicated hybrid motif Clocl_1120 IPR018392 LysM domain Clocl_1120 IPR016047 Peptidase M23 Clocl_1120 IPR013731 Opacity-associated protein A, N-terminal Clocl_1121 IPR016483 Uncharacterised conserved protein UCP006404, peptidase M50/CBS Clocl_1121 IPR008915 Peptidase M50 Clocl_1121 IPR000644 CBS domain Clocl_1122 IPR031158 Glycosyl hydrolases family 10, active site Clocl_1122 IPR001956 Carbohydrate-binding module 3 Clocl_1122 IPR036966 Carbohydrate-binding module 3 superfamily Clocl_1122 IPR001000 Glycoside hydrolase family 10 domain Clocl_1122 IPR001547 Glycoside hydrolase, family 5 Clocl_1122 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clocl_1122 IPR017853 Glycoside hydrolase superfamily Clocl_1122 IPR018087 Glycoside hydrolase, family 5, conserved site Clocl_1123 IPR001602 Uncharacterised protein family UPF0047 Clocl_1123 IPR035917 YjbQ-like superfamily Clocl_1124 IPR016192 APOBEC/CMP deaminase, zinc-binding Clocl_1124 IPR016193 Cytidine deaminase-like Clocl_1124 IPR024072 Dihydrofolate reductase-like domain superfamily Clocl_1124 IPR004794 Riboflavin biosynthesis protein RibD Clocl_1124 IPR011549 Riboflavin-specific deaminase, C-terminal Clocl_1124 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal Clocl_1124 IPR002125 Cytidine and deoxycytidylate deaminase domain Clocl_1125 IPR017938 Riboflavin synthase-like beta-barrel Clocl_1125 IPR026017 Lumazine-binding domain Clocl_1125 IPR001783 Lumazine-binding protein Clocl_1125 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily Clocl_1126 IPR036144 RibA-like superfamily Clocl_1126 IPR016299 Riboflavin biosynthesis protein RibBA Clocl_1126 IPR000926 GTP cyclohydrolase II, RibA Clocl_1126 IPR032677 GTP cyclohydrolase II Clocl_1126 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB Clocl_1126 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Clocl_1127 IPR036467 Lumazine/riboflavin synthase superfamily Clocl_1127 IPR002180 Lumazine/riboflavin synthase Clocl_1127 IPR034964 Lumazine synthase Clocl_1131 IPR003755 HPr(Ser) kinase/phosphorylase Clocl_1131 IPR011104 HPr kinase/phosphorylase, C-terminal Clocl_1131 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal Clocl_1131 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily Clocl_1132 IPR023710 Probable phosphatase YcdX Clocl_1132 IPR004013 PHP domain Clocl_1132 IPR003141 Polymerase/histidinol phosphatase, N-terminal Clocl_1132 IPR016195 Polymerase/histidinol phosphatase-like Clocl_1133 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal Clocl_1133 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase Clocl_1133 IPR016166 FAD-binding domain, PCMH-type Clocl_1133 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily Clocl_1133 IPR006094 FAD linked oxidase, N-terminal Clocl_1133 IPR016169 FAD-binding, type PCMH, subdomain 2 Clocl_1133 IPR036318 FAD-binding, type PCMH-like superfamily Clocl_1133 IPR016167 FAD-binding, type PCMH, subdomain 1 Clocl_1134 IPR005337 RapZ-like family Clocl_1134 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_1135 IPR038136 Gluconeogenesis factor superfamily Clocl_1135 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 Clocl_1135 IPR010119 Gluconeogenesis factor Clocl_1137 IPR018478 Sporulation transcription regulator WhiA, N-terminal domain Clocl_1137 IPR003802 Sporulation regulator WhiA Clocl_1137 IPR023054 Sporulation regulator WhiA, C-terminal Clocl_1137 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_1137 IPR039518 WhiA, LAGLIDADG-like domain Clocl_1137 IPR027434 Homing endonuclease Clocl_1138 IPR035895 HPr-like superfamily Clocl_1138 IPR000032 Phosphocarrier protein HPr-like Clocl_1138 IPR002114 Phosphotransferase system, HPr serine phosphorylation site Clocl_1139 IPR003658 Anti-sigma factor antagonist Clocl_1139 IPR014237 Anti-sigma F factor antagonist Clocl_1139 IPR002645 STAS domain Clocl_1139 IPR036513 STAS domain superfamily Clocl_1140 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clocl_1140 IPR010194 Anti-sigma F factor Clocl_1140 IPR003594 Histidine kinase/HSP90-like ATPase Clocl_1141 IPR014284 RNA polymerase sigma-70 like domain Clocl_1141 IPR014322 RNA polymerase sigma-B/F/G type Clocl_1141 IPR014236 RNA polymerase sigma-F type Clocl_1141 IPR000943 RNA polymerase sigma-70 Clocl_1141 IPR007627 RNA polymerase sigma-70 region 2 Clocl_1141 IPR007624 RNA polymerase sigma-70 region 3 Clocl_1141 IPR007630 RNA polymerase sigma-70 region 4 Clocl_1141 IPR013325 RNA polymerase sigma factor, region 2 Clocl_1141 IPR013324 RNA polymerase sigma factor, region 3/4-like Clocl_1141 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_1142 IPR014203 Sporulation stage V, protein AC Clocl_1142 IPR005562 SpoVA Clocl_1143 IPR038369 Stage V sporulation AD superfamily Clocl_1143 IPR016039 Thiolase-like Clocl_1143 IPR010894 Stage V sporulation AD Clocl_1148 IPR029028 Alpha/beta knot methyltransferases Clocl_1148 IPR001537 tRNA/rRNA methyltransferase, SpoU type Clocl_1148 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase Clocl_1148 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Clocl_1149 IPR008007 Peptidase M42 Clocl_1149 IPR011650 Peptidase M20, dimerisation domain Clocl_1149 IPR010162 Peptidase M20B, peptidase T-like Clocl_1149 IPR036264 Bacterial exopeptidase dimerisation domain Clocl_1149 IPR002933 Peptidase M20 Clocl_1149 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site Clocl_1150 IPR012829 Phosphofructokinase, mixed-substrate PFK group III Clocl_1150 IPR035966 Phosphofructokinase superfamily Clocl_1150 IPR015912 Phosphofructokinase, conserved site Clocl_1150 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type Clocl_1150 IPR000023 Phosphofructokinase domain Clocl_1150 IPR022953 ATP-dependent 6-phosphofructokinase Clocl_1152 IPR036291 NAD(P)-binding domain superfamily Clocl_1152 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I Clocl_1152 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain Clocl_1152 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site Clocl_1152 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family Clocl_1152 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain Clocl_1153 IPR001576 Phosphoglycerate kinase Clocl_1153 IPR015824 Phosphoglycerate kinase, N-terminal Clocl_1153 IPR036043 Phosphoglycerate kinase superfamily Clocl_1153 IPR015911 Phosphoglycerate kinase, conserved site Clocl_1154 IPR013785 Aldolase-type TIM barrel Clocl_1154 IPR035990 Triosephosphate isomerase superfamily Clocl_1154 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic Clocl_1154 IPR000652 Triosephosphate isomerase Clocl_1154 IPR020861 Triosephosphate isomerase, active site Clocl_1155 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily Clocl_1155 IPR011258 BPG-independent PGAM, N-terminal Clocl_1155 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent Clocl_1155 IPR017850 Alkaline-phosphatase-like, core domain superfamily Clocl_1155 IPR006124 Metalloenzyme Clocl_1183 IPR001207 Transposase, mutator type Clocl_1192 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clocl_1192 IPR001956 Carbohydrate-binding module 3 Clocl_1192 IPR036966 Carbohydrate-binding module 3 superfamily Clocl_1192 IPR001701 Glycoside hydrolase family 9 Clocl_1192 IPR033126 Glycosyl hydrolases family 9, Asp/Glu active sites Clocl_1192 IPR018221 Glycoside hydrolase family 9, His active site Clocl_1192 IPR008928 Six-hairpin glycosidase superfamily Clocl_1192 IPR012341 Six-hairpin glycosidase-like superfamily Clocl_1193 IPR020809 Enolase, conserved site Clocl_1193 IPR000941 Enolase Clocl_1193 IPR036849 Enolase-like, C-terminal domain superfamily Clocl_1193 IPR029017 Enolase-like, N-terminal Clocl_1193 IPR020810 Enolase, C-terminal TIM barrel domain Clocl_1193 IPR020811 Enolase, N-terminal Clocl_1195 IPR002686 Transposase IS200-like Clocl_1195 IPR036515 Transposase IS200-like superfamily Clocl_1197 IPR011129 Cold shock domain Clocl_1197 IPR040476 RNase II/RNase R, cold shock domain Clocl_1197 IPR001900 Ribonuclease II/R Clocl_1197 IPR013223 Ribonuclease B, N-terminal OB domain Clocl_1197 IPR022966 Ribonuclease II/R, conserved site Clocl_1197 IPR004476 Ribonuclease II/ribonuclease R Clocl_1197 IPR011805 Ribonuclease R Clocl_1197 IPR022967 RNA-binding domain, S1 Clocl_1197 IPR003029 S1 domain Clocl_1197 IPR012340 Nucleic acid-binding, OB-fold Clocl_1198 IPR007553 Domain of unknown function DUF523 Clocl_1200 IPR006638 Elp3/MiaB/NifB Clocl_1200 IPR002792 TRAM domain Clocl_1200 IPR034557 Threonylcarbamoyladenosine tRNA methylthiotransferase Clocl_1200 IPR006467 MiaB-like tRNA modifying enzyme Clocl_1200 IPR007197 Radical SAM Clocl_1200 IPR038135 Methylthiotransferase, N-terminal domain superfamily Clocl_1200 IPR020612 Methylthiotransferase, conserved site Clocl_1200 IPR013848 Methylthiotransferase, N-terminal Clocl_1200 IPR023404 Radical SAM, alpha/beta horseshoe Clocl_1200 IPR005839 Methylthiotransferase Clocl_1201 IPR009309 IreB regulatory phosphoprotein Clocl_1202 IPR036812 NADP-dependent oxidoreductase domain superfamily Clocl_1202 IPR023210 NADP-dependent oxidoreductase domain Clocl_1202 IPR020471 Aldo/keto reductase Clocl_1203 IPR012337 Ribonuclease H-like superfamily Clocl_1203 IPR037027 YqgF/RNase H-like domain superfamily Clocl_1203 IPR006641 YqgF/RNase H-like domain Clocl_1203 IPR005227 Putative pre-16S rRNA nuclease Clocl_1204 IPR009711 Uncharacterised protein family UPF0473 Clocl_1208 IPR003029 S1 domain Clocl_1208 IPR012340 Nucleic acid-binding, OB-fold Clocl_1208 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G Clocl_1208 IPR004659 Ribonuclease E/G Clocl_1208 IPR022967 RNA-binding domain, S1 Clocl_1209 IPR001787 Ribosomal protein L21 Clocl_1209 IPR028909 Ribosomal protein L21-like Clocl_1209 IPR036164 L21-like superfamily Clocl_1209 IPR018258 Ribosomal protein L21, conserved site Clocl_1211 IPR001684 Ribosomal protein L27 Clocl_1211 IPR018261 Ribosomal protein L27, conserved site Clocl_1212 IPR031167 OBG-type guanine nucleotide-binding (G) domain Clocl_1212 IPR035101 GTP-binding protein, Obg-type Clocl_1212 IPR014100 GTP-binding protein Obg/CgtA Clocl_1212 IPR006074 GTP1/OBG, conserved site Clocl_1212 IPR006169 GTP1/OBG domain Clocl_1212 IPR036726 GTP1/OBG domain superfamily Clocl_1212 IPR006073 GTP binding domain Clocl_1212 IPR015349 GTP-binding protein OBG, C-terminal Clocl_1212 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_1212 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily Clocl_1214 IPR017924 RNA-binding protein YhbY Clocl_1214 IPR001890 RNA-binding, CRM domain Clocl_1214 IPR035920 YhbY-like superfamily Clocl_1218 IPR000917 Sulfatase, N-terminal Clocl_1218 IPR017850 Alkaline-phosphatase-like, core domain superfamily Clocl_1218 IPR012160 Lipoteichoic acid synthase-like Clocl_1222 IPR000362 Fumarate lyase family Clocl_1222 IPR022761 Fumarate lyase, N-terminal Clocl_1222 IPR008948 L-Aspartase-like Clocl_1222 IPR029419 Argininosuccinate lyase, C-terminal Clocl_1222 IPR009049 Argininosuccinate lyase Clocl_1222 IPR024083 Fumarase/histidase, N-terminal Clocl_1222 IPR020557 Fumarate lyase, conserved site Clocl_1223 IPR023434 Argininosuccinate synthase, type 1 subfamily Clocl_1223 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body Clocl_1223 IPR018223 Argininosuccinate synthase, conserved site Clocl_1223 IPR001518 Argininosuccinate synthase Clocl_1223 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clocl_1224 IPR036397 Ribonuclease H superfamily Clocl_1224 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site Clocl_1224 IPR002176 Crossover junction endodeoxyribonuclease RuvC Clocl_1224 IPR012337 Ribonuclease H-like superfamily Clocl_1225 IPR036267 RuvA, C-terminal domain superfamily Clocl_1225 IPR010994 RuvA domain 2-like Clocl_1225 IPR000085 Bacterial DNA recombination protein RuvA Clocl_1225 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 Clocl_1225 IPR012340 Nucleic acid-binding, OB-fold Clocl_1225 IPR011114 Holliday junction DNA helicase RuvA, C-terminal Clocl_1225 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial Clocl_1226 IPR008824 RuvB-like P-loop domain Clocl_1226 IPR008823 RuvB C-terminal winged helix domain Clocl_1226 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_1226 IPR036390 Winged helix DNA-binding domain superfamily Clocl_1226 IPR003593 AAA+ ATPase domain Clocl_1226 IPR004605 DNA helicase, Holliday junction RuvB-type Clocl_1226 IPR041445 RuvB, AAA lid domain Clocl_1226 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_1228 IPR007253 Putative cell wall binding repeat 2 Clocl_1228 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain Clocl_1229 IPR036291 NAD(P)-binding domain superfamily Clocl_1229 IPR005886 UDP-glucose 4-epimerase Clocl_1229 IPR016040 NAD(P)-binding domain Clocl_1231 IPR036345 Exoribonuclease, PH domain 2 superfamily Clocl_1231 IPR027408 PNPase/RNase PH domain superfamily Clocl_1231 IPR020568 Ribosomal protein S5 domain 2-type fold Clocl_1231 IPR002381 Ribonuclease PH, bacterial-type Clocl_1231 IPR018336 Ribonuclease PH, conserved site Clocl_1231 IPR015847 Exoribonuclease, phosphorolytic domain 2 Clocl_1231 IPR001247 Exoribonuclease, phosphorolytic domain 1 Clocl_1232 IPR002637 Ham1-like protein Clocl_1232 IPR020922 dITP/XTP pyrophosphatase Clocl_1232 IPR029001 Inosine triphosphate pyrophosphatase-like Clocl_1236 IPR014017 UvrD-like DNA helicase, C-terminal Clocl_1236 IPR000212 DNA helicase, UvrD/REP type Clocl_1236 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_1236 IPR014016 UvrD-like helicase, ATP-binding domain Clocl_1236 IPR034739 UvrD/AddA helicase, N-terminal Clocl_1236 IPR013986 DExx box DNA helicase domain superfamily Clocl_1237 IPR034739 UvrD/AddA helicase, N-terminal Clocl_1237 IPR014016 UvrD-like helicase, ATP-binding domain Clocl_1237 IPR000212 DNA helicase, UvrD/REP type Clocl_1237 IPR014017 UvrD-like DNA helicase, C-terminal Clocl_1237 IPR013986 DExx box DNA helicase domain superfamily Clocl_1237 IPR005751 ATP-dependent DNA helicase PcrA Clocl_1237 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_1239 IPR001667 DDH domain Clocl_1239 IPR038763 DHH phosphoesterase superfamily Clocl_1239 IPR003156 DHHA1 domain Clocl_1239 IPR004610 Bacterial RecJ exonuclease Clocl_1239 IPR018779 Single-stranded-DNA-specific exonuclease RecJ, C-terminal Clocl_1239 IPR041122 RecJ, OB domain Clocl_1241 IPR008271 Serine/threonine-protein kinase, active site Clocl_1241 IPR000719 Protein kinase domain Clocl_1241 IPR017441 Protein kinase, ATP binding site Clocl_1241 IPR011009 Protein kinase-like domain superfamily Clocl_1241 IPR005543 PASTA domain Clocl_1242 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Clocl_1242 IPR035906 MetI-like superfamily Clocl_1243 IPR035906 MetI-like superfamily Clocl_1243 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Clocl_1245 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_1245 IPR036266 SecA, Wing/Scaffold superfamily Clocl_1245 IPR011130 SecA, preprotein cross-linking domain Clocl_1245 IPR036670 SecA, preprotein cross-linking domain superfamily Clocl_1245 IPR011115 SecA DEAD-like, N-terminal Clocl_1245 IPR020937 SecA conserved site Clocl_1245 IPR000185 Protein translocase subunit SecA Clocl_1245 IPR004027 SEC-C motif Clocl_1245 IPR014018 SecA motor DEAD Clocl_1245 IPR011116 SecA Wing/Scaffold Clocl_1247 IPR001509 NAD-dependent epimerase/dehydratase Clocl_1247 IPR036291 NAD(P)-binding domain superfamily Clocl_1256 IPR033966 RuBisCO Clocl_1256 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal Clocl_1256 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily Clocl_1256 IPR036422 RuBisCO large subunit, N-terminal domain superfamily Clocl_1257 IPR005475 Transketolase-like, pyrimidine-binding domain Clocl_1257 IPR029061 Thiamin diphosphate-binding fold Clocl_1257 IPR033248 Transketolase, C-terminal domain Clocl_1257 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II Clocl_1258 IPR029061 Thiamin diphosphate-binding fold Clocl_1258 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II Clocl_1258 IPR005475 Transketolase-like, pyrimidine-binding domain Clocl_1258 IPR005478 Transketolase, bacterial-like Clocl_1258 IPR020826 Transketolase binding site Clocl_1258 IPR033248 Transketolase, C-terminal domain Clocl_1258 IPR033247 Transketolase family Clocl_1258 IPR005474 Transketolase, N-terminal Clocl_1259 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm Clocl_1259 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily Clocl_1259 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding Clocl_1259 IPR033705 Valyl tRNA synthetase, anticodon-binding domain Clocl_1259 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clocl_1259 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding Clocl_1259 IPR002300 Aminoacyl-tRNA synthetase, class Ia Clocl_1259 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site Clocl_1259 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm Clocl_1259 IPR002303 Valine-tRNA ligase Clocl_1259 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain Clocl_1260 IPR011006 CheY-like superfamily Clocl_1260 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_1260 IPR005561 ANTAR domain Clocl_1260 IPR013587 Nitrate/nitrite sensing protein Clocl_1260 IPR010910 Nitrate/nitrite sensing protein, bacterial Clocl_1261 IPR000392 NifH/frxC family Clocl_1261 IPR005977 Nitrogenase iron protein NifH Clocl_1261 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_1261 IPR030655 NifH/chlL conserved site Clocl_1262 IPR002187 Nitrogen regulatory protein PII Clocl_1262 IPR011322 Nitrogen regulatory PII-like, alpha/beta Clocl_1262 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Clocl_1262 IPR017918 Nitrogen regulatory protein PII, conserved site Clocl_1262 IPR002332 Nitrogen regulatory protein P-II, urydylation site Clocl_1263 IPR017918 Nitrogen regulatory protein PII, conserved site Clocl_1263 IPR011322 Nitrogen regulatory PII-like, alpha/beta Clocl_1263 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Clocl_1263 IPR002187 Nitrogen regulatory protein PII Clocl_1264 IPR000510 Nitrogenase/oxidoreductase, component 1 Clocl_1264 IPR010143 Nitrogenase component 1, alpha chain Clocl_1264 IPR000318 Nitrogenase component 1, conserved site Clocl_1264 IPR005972 Nitrogenase molybdenum-iron protein alpha chain Clocl_1265 IPR005976 Nitrogenase molybdenum-iron protein beta chain Clocl_1265 IPR000510 Nitrogenase/oxidoreductase, component 1 Clocl_1265 IPR000318 Nitrogenase component 1, conserved site Clocl_1266 IPR005973 Nitrogenase MoFe cofactor biosynthesis protein NifE Clocl_1266 IPR000510 Nitrogenase/oxidoreductase, component 1 Clocl_1266 IPR000318 Nitrogenase component 1, conserved site Clocl_1267 IPR013785 Aldolase-type TIM barrel Clocl_1267 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis Clocl_1267 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily Clocl_1267 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site Clocl_1267 IPR005980 Nitrogenase cofactor biosynthesis protein NifB Clocl_1267 IPR034165 FeMo cofactor biosynthesis protein NifB, C-terminal Clocl_1267 IPR007197 Radical SAM Clocl_1268 IPR036249 Thioredoxin-like superfamily Clocl_1269 IPR013785 Aldolase-type TIM barrel Clocl_1270 IPR000891 Pyruvate carboxyltransferase Clocl_1270 IPR013785 Aldolase-type TIM barrel Clocl_1270 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site Clocl_1271 IPR003010 Carbon-nitrogen hydrolase Clocl_1271 IPR036526 Carbon-nitrogen hydrolase superfamily Clocl_1271 IPR014445 Glutamine-dependent NAD(+) synthetase Clocl_1271 IPR041856 Glutamine-dependent NAD+ synthetase, C-terminal Clocl_1271 IPR022310 NAD/GMP synthase Clocl_1271 IPR003694 NAD(+) synthetase Clocl_1271 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clocl_1272 IPR001207 Transposase, mutator type Clocl_1273 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein Clocl_1273 IPR002611 IstB-like ATP-binding protein Clocl_1273 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_1273 IPR001270 ClpA/B family Clocl_1273 IPR003593 AAA+ ATPase domain Clocl_1274 IPR001584 Integrase, catalytic core Clocl_1274 IPR017894 HTH domain, IS21 transposase-type Clocl_1276 IPR003593 AAA+ ATPase domain Clocl_1276 IPR003439 ABC transporter-like Clocl_1276 IPR017871 ABC transporter, conserved site Clocl_1276 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_1279 IPR023504 Bacteriohemerythrin-like protein Clocl_1279 IPR012312 Haemerythrin-like Clocl_1279 IPR016131 Haemerythrin, iron-binding site Clocl_1279 IPR035938 Hemerythrin-like superfamily Clocl_1279 IPR012827 Haemerythrin, metal-binding domain Clocl_1280 IPR005973 Nitrogenase MoFe cofactor biosynthesis protein NifE Clocl_1280 IPR000318 Nitrogenase component 1, conserved site Clocl_1280 IPR000510 Nitrogenase/oxidoreductase, component 1 Clocl_1281 IPR000318 Nitrogenase component 1, conserved site Clocl_1281 IPR000510 Nitrogenase/oxidoreductase, component 1 Clocl_1281 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily Clocl_1281 IPR007419 BFD-like [2Fe-2S]-binding domain Clocl_1281 IPR005973 Nitrogenase MoFe cofactor biosynthesis protein NifE Clocl_1283 IPR035906 MetI-like superfamily Clocl_1283 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Clocl_1287 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN Clocl_1287 IPR034505 Anaerobic coproporphyrinogen-III oxidase Clocl_1287 IPR006638 Elp3/MiaB/NifB Clocl_1287 IPR010723 HemN, C-terminal Clocl_1287 IPR007197 Radical SAM Clocl_1287 IPR023404 Radical SAM, alpha/beta horseshoe Clocl_1290 IPR003346 Transposase, IS116/IS110/IS902 Clocl_1290 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal Clocl_1291 IPR007492 LytTR DNA-binding domain Clocl_1291 IPR011006 CheY-like superfamily Clocl_1291 IPR001789 Signal transduction response regulator, receiver domain Clocl_1293 IPR015500 Peptidase S8, subtilisin-related Clocl_1293 IPR022398 Peptidase S8, subtilisin, His-active site Clocl_1293 IPR023827 Peptidase S8, subtilisin, Asp-active site Clocl_1293 IPR034202 Subtilisin Carlsberg-like catalytic domain Clocl_1293 IPR023828 Peptidase S8, subtilisin, Ser-active site Clocl_1293 IPR000209 Peptidase S8/S53 domain Clocl_1293 IPR036852 Peptidase S8/S53 domain superfamily Clocl_1298 IPR036749 Expansin, cellulose-binding-like domain superfamily Clocl_1298 IPR009009 RlpA-like protein, double-psi beta-barrel domain Clocl_1298 IPR036908 RlpA-like domain superfamily Clocl_1299 IPR041879 YvgL-like, substrate binding domain Clocl_1299 IPR005950 Molybdate ABC transporter, substrate-binding protein Clocl_1300 IPR035906 MetI-like superfamily Clocl_1300 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Clocl_1300 IPR011867 Molybdate ABC transporter, permease protein Clocl_1301 IPR005116 Transport-associated OB, type 1 Clocl_1301 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal Clocl_1301 IPR003593 AAA+ ATPase domain Clocl_1301 IPR003439 ABC transporter-like Clocl_1301 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_1301 IPR017871 ABC transporter, conserved site Clocl_1301 IPR008995 Molybdate/tungstate binding, C-terminal Clocl_1301 IPR005666 Sulphate transport system permease protein 1 Clocl_1302 IPR009000 Translation protein, beta-barrel domain superfamily Clocl_1302 IPR000795 Transcription factor, GTP-binding domain Clocl_1302 IPR005225 Small GTP-binding protein domain Clocl_1302 IPR041732 Peptide chain release factor 3, GTP-binding domain Clocl_1302 IPR035647 EF-G domain III/V-like Clocl_1302 IPR032090 Peptide chain release factor 3, C-terminal Clocl_1302 IPR004548 Peptide chain release factor 3 Clocl_1302 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_1302 IPR031157 Tr-type G domain, conserved site Clocl_1302 IPR004161 Translation elongation factor EFTu-like, domain 2 Clocl_1302 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily Clocl_1303 IPR012947 Threonyl/alanyl tRNA synthetase, SAD Clocl_1303 IPR033728 Threonine-tRNA ligase catalytic core domain Clocl_1303 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily Clocl_1303 IPR002320 Threonine-tRNA ligase, class IIa Clocl_1303 IPR004095 TGS Clocl_1303 IPR012675 Beta-grasp domain superfamily Clocl_1303 IPR036621 Anticodon-binding domain superfamily Clocl_1303 IPR004154 Anticodon-binding Clocl_1303 IPR006195 Aminoacyl-tRNA synthetase, class II Clocl_1303 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) Clocl_1303 IPR012676 TGS-like Clocl_1306 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria Clocl_1306 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB Clocl_1306 IPR007202 4Fe-4S domain Clocl_1306 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clocl_1306 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clocl_1306 IPR011005 Dihydropteroate synthase-like Clocl_1309 IPR028431 NADP-reducing hydrogenase subunit HndA Clocl_1309 IPR002023 NADH-quinone oxidoreductase subunit E-like Clocl_1309 IPR042128 NuoE domain Clocl_1309 IPR041921 NADH-quinone oxidoreductase subunit E, N-terminal Clocl_1309 IPR036249 Thioredoxin-like superfamily Clocl_1312 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Clocl_1312 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain Clocl_1312 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Clocl_1312 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clocl_1312 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site Clocl_1312 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clocl_1312 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Clocl_1313 IPR036010 2Fe-2S ferredoxin-like superfamily Clocl_1313 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain Clocl_1313 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clocl_1313 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clocl_1313 IPR009016 Iron hydrogenase Clocl_1313 IPR004108 Iron hydrogenase, large subunit, C-terminal Clocl_1313 IPR003149 Iron hydrogenase, small subunit Clocl_1313 IPR036991 Iron hydrogenase, small subunit superfamily Clocl_1313 IPR013352 Iron hydrogenase, subset Clocl_1313 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding Clocl_1314 IPR020084 NUDIX hydrolase, conserved site Clocl_1314 IPR000086 NUDIX hydrolase domain Clocl_1314 IPR020476 NUDIX hydrolase Clocl_1314 IPR015797 NUDIX hydrolase-like domain superfamily Clocl_1315 IPR029479 Nitroreductase Clocl_1315 IPR000415 Nitroreductase-like Clocl_1316 IPR002563 Flavin reductase like domain Clocl_1316 IPR012349 FMN-binding split barrel Clocl_1317 IPR009057 Homeobox-like domain superfamily Clocl_1317 IPR018060 DNA binding HTH domain, AraC-type Clocl_1317 IPR018062 HTH domain AraC-type, conserved site Clocl_1318 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Clocl_1318 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Clocl_1318 IPR019942 LL-diaminopimelate aminotransferase/aminotransferase ALD1 Clocl_1318 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site Clocl_1318 IPR019881 Diaminopimelate aminotransferase, DapL, Desulfovibrio-type Clocl_1318 IPR004839 Aminotransferase, class I/classII Clocl_1318 IPR015424 Pyridoxal phosphate-dependent transferase Clocl_1319 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm Clocl_1319 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit Clocl_1319 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial Clocl_1319 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal Clocl_1319 IPR002319 Phenylalanyl-tRNA synthetase Clocl_1319 IPR006195 Aminoacyl-tRNA synthetase, class II Clocl_1320 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily Clocl_1320 IPR012340 Nucleic acid-binding, OB-fold Clocl_1320 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit Clocl_1320 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 Clocl_1320 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain Clocl_1320 IPR009061 Putative DNA-binding domain superfamily Clocl_1320 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain Clocl_1320 IPR005147 tRNA synthetase, B5-domain Clocl_1320 IPR005146 B3/B4 tRNA-binding domain Clocl_1320 IPR005121 Ferrodoxin-fold anticodon-binding domain Clocl_1320 IPR002547 tRNA-binding domain Clocl_1322 IPR001672 Phosphoglucose isomerase (PGI) Clocl_1322 IPR018189 Phosphoglucose isomerase, conserved site Clocl_1322 IPR035476 Phosphoglucose isomerase, SIS domain 1 Clocl_1322 IPR035482 Phosphoglucose isomerase, SIS domain 2 Clocl_1323 IPR029052 Metallo-dependent phosphatase-like Clocl_1323 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type Clocl_1324 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Clocl_1324 IPR029151 Periplasmic sensor-like domain superfamily Clocl_1324 IPR033479 Double Cache domain 1 Clocl_1324 IPR003660 HAMP domain Clocl_1327 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Clocl_1327 IPR007184 Mannoside phosphorylase Clocl_1328 IPR029044 Nucleotide-diphospho-sugar transferases Clocl_1328 IPR005835 Nucleotidyl transferase domain Clocl_1328 IPR037538 UTP--glucose-1-phosphate uridylyltransferase, cyanobacteria Clocl_1331 IPR001250 Mannose-6-phosphate isomerase, type I Clocl_1331 IPR014628 Mannose-6-phosphate isomerase, Firmicutes type, short form Clocl_1331 IPR014710 RmlC-like jelly roll fold Clocl_1331 IPR011051 RmlC-like cupin domain superfamily Clocl_1332 IPR001021 Ribosomal protein L25, long-form Clocl_1332 IPR037121 Ribosomal protein L25, C-terminal Clocl_1332 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily Clocl_1332 IPR029751 Ribosomal protein L25 Clocl_1332 IPR020057 Ribosomal protein L25, beta domain Clocl_1332 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Clocl_1333 IPR002347 Short-chain dehydrogenase/reductase SDR Clocl_1333 IPR020904 Short-chain dehydrogenase/reductase, conserved site Clocl_1333 IPR036291 NAD(P)-binding domain superfamily Clocl_1335 IPR003346 Transposase, IS116/IS110/IS902 Clocl_1335 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal Clocl_1339 IPR008254 Flavodoxin/nitric oxide synthase Clocl_1339 IPR029039 Flavoprotein-like superfamily Clocl_1339 IPR010089 Flavoprotein WrbA-like Clocl_1339 IPR005025 NADPH-dependent FMN reductase-like Clocl_1339 IPR037513 NAD(P)H dehydrogenase (quinone), prokaryotic Clocl_1346 IPR008146 Glutamine synthetase, catalytic domain Clocl_1346 IPR027303 Glutamine synthetase, glycine-rich site Clocl_1346 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain Clocl_1346 IPR022147 Glutamine synthetase type III N-terminal Clocl_1346 IPR040577 Glutamine synthetase, C-terminal Clocl_1348 IPR004474 Cell envelope-related transcriptional attenuator domain Clocl_1348 IPR023734 Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagU Clocl_1349 IPR011006 CheY-like superfamily Clocl_1349 IPR001789 Signal transduction response regulator, receiver domain Clocl_1349 IPR007492 LytTR DNA-binding domain Clocl_1351 IPR022853 Uncharacterised protein family YdfA-immunity Clocl_1352 IPR002810 NfeD-like, C-terminal domain Clocl_1352 IPR002825 Peptidase S49, serine-peptidase prokaryotes Clocl_1352 IPR029045 ClpP/crotonase-like domain superfamily Clocl_1353 IPR033463 Single cache domain 3 Clocl_1353 IPR039506 SpoOB, alpha-helical domain Clocl_1353 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB Clocl_1353 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Clocl_1353 IPR029151 Periplasmic sensor-like domain superfamily Clocl_1353 IPR013767 PAS fold Clocl_1353 IPR005467 Histidine kinase domain Clocl_1353 IPR000014 PAS domain Clocl_1353 IPR035965 PAS domain superfamily Clocl_1353 IPR003594 Histidine kinase/HSP90-like ATPase Clocl_1353 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clocl_1354 IPR001544 Aminotransferase class IV Clocl_1354 IPR018300 Aminotransferase, class IV, conserved site Clocl_1354 IPR036038 Aminotransferase-like, PLP-dependent enzymes Clocl_1354 IPR005786 Branched-chain amino acid aminotransferase II Clocl_1354 IPR033939 Branched-chain aminotransferase Clocl_1355 IPR010021 HAD-superfamily phosphatase, YqeG-like Clocl_1355 IPR023214 HAD superfamily Clocl_1355 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Clocl_1355 IPR036412 HAD-like superfamily Clocl_1355 IPR006439 HAD hydrolase, subfamily IA Clocl_1356 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase Clocl_1356 IPR036291 NAD(P)-binding domain superfamily Clocl_1356 IPR041121 SDH, C-terminal Clocl_1356 IPR011342 Shikimate dehydrogenase Clocl_1356 IPR022893 Shikimate dehydrogenase family Clocl_1356 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal Clocl_1357 IPR002416 Type II secretion system protein H Clocl_1357 IPR001082 Fimbrial protein pilin Clocl_1357 IPR012902 Prokaryotic N-terminal methylation site Clocl_1358 IPR010627 Peptidase A24A, N-terminal Clocl_1358 IPR014032 Peptidase A24A, prepilin type IV, bacterial Clocl_1358 IPR000045 Prepilin type IV endopeptidase, peptidase domain Clocl_1361 IPR001874 Dehydroquinase, class II Clocl_1361 IPR018509 Dehydroquinase, class II, conserved site Clocl_1361 IPR036441 Dehydroquinase, class II superfamily Clocl_1362 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Clocl_1362 IPR036005 Creatinase/aminopeptidase-like Clocl_1362 IPR000587 Creatinase, N-terminal Clocl_1362 IPR000994 Peptidase M24 Clocl_1362 IPR001714 Peptidase M24, methionine aminopeptidase Clocl_1362 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site Clocl_1363 IPR001059 Translation elongation factor P/YeiP, central Clocl_1363 IPR013185 Translation elongation factor, KOW-like Clocl_1363 IPR020599 Translation elongation factor P/YeiP Clocl_1363 IPR013852 Translation elongation factor P/YeiP, conserved site Clocl_1363 IPR012340 Nucleic acid-binding, OB-fold Clocl_1363 IPR015365 Elongation factor P, C-terminal Clocl_1363 IPR008991 Translation protein SH3-like domain superfamily Clocl_1363 IPR014722 Ribosomal protein L2, domain 2 Clocl_1363 IPR011768 Translation elongation factor P Clocl_1367 IPR001633 EAL domain Clocl_1367 IPR000160 GGDEF domain Clocl_1367 IPR005330 MHYT domain Clocl_1367 IPR035919 EAL domain superfamily Clocl_1367 IPR029787 Nucleotide cyclase Clocl_1368 IPR002912 ACT domain Clocl_1368 IPR022986 Uncharacterised protein family UPF0237, ACT-type Clocl_1369 IPR007841 Uncharacterised protein family UPF0210 Clocl_1370 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site Clocl_1370 IPR007627 RNA polymerase sigma-70 region 2 Clocl_1370 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 Clocl_1370 IPR013325 RNA polymerase sigma factor, region 2 Clocl_1370 IPR013324 RNA polymerase sigma factor, region 3/4-like Clocl_1370 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_1370 IPR039425 RNA polymerase sigma-70 like Clocl_1370 IPR014284 RNA polymerase sigma-70 like domain Clocl_1374 IPR003593 AAA+ ATPase domain Clocl_1374 IPR003439 ABC transporter-like Clocl_1374 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_1374 IPR017871 ABC transporter, conserved site Clocl_1378 IPR007197 Radical SAM Clocl_1378 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria Clocl_1378 IPR023885 4Fe4S-binding SPASM domain Clocl_1378 IPR006638 Elp3/MiaB/NifB Clocl_1378 IPR013785 Aldolase-type TIM barrel Clocl_1378 IPR017200 Coenzyme PQQ synthesis protein E Clocl_1381 IPR009078 Ferritin-like superfamily Clocl_1381 IPR039377 Manganese catalase, ferritin-like di-iron-binding domain Clocl_1381 IPR007760 Manganese catalase Clocl_1381 IPR012347 Ferritin-like Clocl_1384 IPR036526 Carbon-nitrogen hydrolase superfamily Clocl_1384 IPR001110 Uncharacterised protein family UPF0012, conserved site Clocl_1384 IPR003010 Carbon-nitrogen hydrolase Clocl_1385 IPR000589 Ribosomal protein S15 Clocl_1385 IPR005290 Ribosomal protein S15, bacterial-type Clocl_1385 IPR009068 S15/NS1, RNA-binding Clocl_1386 IPR003029 S1 domain Clocl_1386 IPR022967 RNA-binding domain, S1 Clocl_1386 IPR020568 Ribosomal protein S5 domain 2-type fold Clocl_1386 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily Clocl_1386 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain Clocl_1386 IPR027408 PNPase/RNase PH domain superfamily Clocl_1386 IPR004087 K Homology domain Clocl_1386 IPR012340 Nucleic acid-binding, OB-fold Clocl_1386 IPR036612 K Homology domain, type 1 superfamily Clocl_1386 IPR004088 K Homology domain, type 1 Clocl_1386 IPR036345 Exoribonuclease, PH domain 2 superfamily Clocl_1386 IPR015847 Exoribonuclease, phosphorolytic domain 2 Clocl_1386 IPR001247 Exoribonuclease, phosphorolytic domain 1 Clocl_1386 IPR012162 Polyribonucleotide nucleotidyltransferase Clocl_1387 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like Clocl_1387 IPR011765 Peptidase M16, N-terminal Clocl_1387 IPR001431 Peptidase M16, zinc-binding site Clocl_1387 IPR007863 Peptidase M16, C-terminal Clocl_1388 IPR036291 NAD(P)-binding domain superfamily Clocl_1388 IPR031629 Dipicolinate synthase subunit A, N-terminal Clocl_1388 IPR014215 Dipicolinic acid synthetase subunit A Clocl_1388 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain Clocl_1389 IPR014214 Dipicolinic acid synthetase, subunit B Clocl_1389 IPR036551 Flavin prenyltransferase-like Clocl_1389 IPR003382 Flavoprotein Clocl_1390 IPR037257 General secretory system II, protein E, N-terminal superfamily Clocl_1390 IPR042181 Type II secretion system, protein E, N-terminal Clocl_1390 IPR003593 AAA+ ATPase domain Clocl_1390 IPR013374 ATPase, type IV, pilus assembly, PilB Clocl_1390 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_1390 IPR001482 Type II/IV secretion system protein Clocl_1390 IPR007831 General secretory system II, protein E, N-terminal Clocl_1391 IPR006321 Pilus retraction protein PilT Clocl_1391 IPR001482 Type II/IV secretion system protein Clocl_1391 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_1391 IPR003593 AAA+ ATPase domain Clocl_1392 IPR003004 GspF/PilC family Clocl_1392 IPR018076 Type II secretion system F domain Clocl_1392 IPR042094 Type II secretion system F domain superfamily Clocl_1393 IPR001082 Fimbrial protein pilin Clocl_1393 IPR012902 Prokaryotic N-terminal methylation site Clocl_1400 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA Clocl_1400 IPR029045 ClpP/crotonase-like domain superfamily Clocl_1402 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_1402 IPR018541 FtsK gamma domain Clocl_1402 IPR002543 FtsK domain Clocl_1402 IPR041027 FtsK alpha domain Clocl_1402 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_1402 IPR036390 Winged helix DNA-binding domain superfamily Clocl_1403 IPR006638 Elp3/MiaB/NifB Clocl_1403 IPR007197 Radical SAM Clocl_1403 IPR023404 Radical SAM, alpha/beta horseshoe Clocl_1403 IPR022946 Uncharacterised protein family UPF0313 Clocl_1403 IPR013704 Uncharacterised protein family UPF0313, N-terminal Clocl_1403 IPR024560 Uncharacterised protein family UPF0313, C-terminal Clocl_1404 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Clocl_1404 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site Clocl_1404 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Clocl_1404 IPR036291 NAD(P)-binding domain superfamily Clocl_1404 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase Clocl_1406 IPR006675 HDIG domain Clocl_1406 IPR003607 HD/PDEase domain Clocl_1406 IPR022711 Ribonuclease Y, N-terminal Clocl_1406 IPR017705 Ribonuclease Y Clocl_1406 IPR006674 HD domain Clocl_1406 IPR004087 K Homology domain Clocl_1406 IPR004088 K Homology domain, type 1 Clocl_1406 IPR036612 K Homology domain, type 1 superfamily Clocl_1407 IPR005235 Metallophosphoesterase, YmdB-like Clocl_1407 IPR029052 Metallo-dependent phosphatase-like Clocl_1408 IPR007347 Sporulation stage V, protein S Clocl_1408 IPR036882 Alba-like domain superfamily Clocl_1411 IPR002514 Transposase IS3/IS911family Clocl_1411 IPR009057 Homeobox-like domain superfamily Clocl_1412 IPR008878 Transposase IS66, Orf2 Clocl_1413 IPR039552 Transposase IS66, C-terminal Clocl_1413 IPR004291 Transposase, IS66 Clocl_1413 IPR024474 Zinc-finger binding domain of transposase IS66 Clocl_1413 IPR024463 Transposase TnpC, homeodomain Clocl_1416 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site Clocl_1416 IPR012280 Semialdehyde dehydrogenase, dimerisation domain Clocl_1416 IPR000534 Semialdehyde dehydrogenase, NAD-binding Clocl_1416 IPR005676 Aspartate-semialdehyde dehydrogenase, peptidoglycan lacking Clocl_1416 IPR012080 Aspartate-semialdehyde dehydrogenase Clocl_1416 IPR036291 NAD(P)-binding domain superfamily Clocl_1417 IPR002528 Multi antimicrobial extrusion protein Clocl_1420 IPR036291 NAD(P)-binding domain superfamily Clocl_1420 IPR016040 NAD(P)-binding domain Clocl_1420 IPR005888 dTDP-glucose 4,6-dehydratase Clocl_1421 IPR010273 Protein of unknown function DUF881 Clocl_1424 IPR005835 Nucleotidyl transferase domain Clocl_1424 IPR029044 Nucleotide-diphospho-sugar transferases Clocl_1424 IPR037538 UTP--glucose-1-phosphate uridylyltransferase, cyanobacteria Clocl_1426 IPR010273 Protein of unknown function DUF881 Clocl_1428 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel Clocl_1428 IPR002509 NodB homology domain Clocl_1428 IPR014235 Peptidoglycan-N-acetylmuramic acid deacetylase PdaA Clocl_1429 IPR022476 Sporulation protein YabP/YqfC Clocl_1429 IPR022477 Sporulation protein YqfC Clocl_1431 IPR003714 PhoH-like protein Clocl_1431 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_1432 IPR011621 Metal-dependent phosphohydrolase, 7TM intracellular domain Clocl_1432 IPR011624 Metal-dependent phosphohydrolase, 7TM extracellular domain Clocl_1432 IPR006675 HDIG domain Clocl_1432 IPR006674 HD domain Clocl_1432 IPR003607 HD/PDEase domain Clocl_1433 IPR002036 Endoribonuclease YbeY Clocl_1433 IPR023091 Metalloprotease catalytic domain superfamily, predicted Clocl_1434 IPR005225 Small GTP-binding protein domain Clocl_1434 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_1434 IPR004044 K Homology domain, type 2 Clocl_1434 IPR015946 K homology domain-like, alpha/beta Clocl_1434 IPR005662 GTP-binding protein Era Clocl_1434 IPR006073 GTP binding domain Clocl_1434 IPR009019 K homology domain superfamily, prokaryotic type Clocl_1434 IPR030388 Era-type guanine nucleotide-binding (G) domain Clocl_1436 IPR037278 ARFGAP/RecO-like zinc finger Clocl_1436 IPR022572 DNA replication/recombination mediator RecO, N-terminal Clocl_1436 IPR012340 Nucleic acid-binding, OB-fold Clocl_1436 IPR003717 Recombination protein O, RecO Clocl_1436 IPR042242 Recombination protein O, zinc-binding domain Clocl_1439 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Clocl_1439 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Clocl_1439 IPR015424 Pyridoxal phosphate-dependent transferase Clocl_1439 IPR016454 Cysteine desulfurase Clocl_1439 IPR017772 Cysteine desulfurase NifS, bacterial/archaeal Clocl_1439 IPR010240 Cysteine desulfurase IscS Clocl_1439 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site Clocl_1439 IPR000192 Aminotransferase class V domain Clocl_1440 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clocl_1440 IPR020536 Thil, AANH domain Clocl_1440 IPR004114 THUMP domain Clocl_1440 IPR003720 tRNA sulfurtransferase ThiI Clocl_1441 IPR007391 Vancomycin resistance VanW Clocl_1445 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Clocl_1445 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Clocl_1445 IPR001085 Serine hydroxymethyltransferase Clocl_1445 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site Clocl_1445 IPR039429 Serine hydroxymethyltransferase-like domain Clocl_1445 IPR015424 Pyridoxal phosphate-dependent transferase Clocl_1446 IPR002931 Transglutaminase-like Clocl_1446 IPR025403 Domain of unknown function DUF4129 Clocl_1446 IPR038765 Papain-like cysteine peptidase superfamily Clocl_1446 IPR021878 Protein-glutamine gamma-glutamyltransferase TgpA, N-terminal Clocl_1448 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_1448 IPR011703 ATPase, AAA-3 Clocl_1448 IPR041628 ChlI/MoxR, AAA lid domain Clocl_1449 IPR001557 L-lactate/malate dehydrogenase Clocl_1449 IPR011304 L-lactate dehydrogenase Clocl_1449 IPR022383 Lactate/malate dehydrogenase, C-terminal Clocl_1449 IPR001236 Lactate/malate dehydrogenase, N-terminal Clocl_1449 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal Clocl_1449 IPR036291 NAD(P)-binding domain superfamily Clocl_1449 IPR018177 L-lactate dehydrogenase, active site Clocl_1450 IPR036653 CinA-like, C-terminal Clocl_1450 IPR008136 CinA, C-terminal Clocl_1450 IPR041424 CinA, KH domain Clocl_1450 IPR001453 MoaB/Mog domain Clocl_1450 IPR036425 MoaB/Mog-like domain superfamily Clocl_1450 IPR008135 Competence-induced protein CinA Clocl_1451 IPR004268 Peptidoglycan biosynthesis protein MurJ Clocl_1452 IPR013765 DNA recombination and repair protein RecA Clocl_1452 IPR023400 DNA recombination and repair protein RecA, C-terminal Clocl_1452 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain Clocl_1452 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_1452 IPR020584 DNA recombination/repair protein RecA, conserved site Clocl_1452 IPR003593 AAA+ ATPase domain Clocl_1452 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface Clocl_1453 IPR036013 Band 7/SPFH domain superfamily Clocl_1453 IPR010201 HflK Clocl_1453 IPR001107 Band 7 domain Clocl_1454 IPR036013 Band 7/SPFH domain superfamily Clocl_1454 IPR001107 Band 7 domain Clocl_1454 IPR010200 HflC Clocl_1455 IPR004995 Bacillus/Clostridium Ger spore germination protein Clocl_1457 IPR008844 Spore germination GerAC Clocl_1457 IPR038501 Spore germination GerAC superfamily Clocl_1461 IPR005467 Histidine kinase domain Clocl_1461 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Clocl_1461 IPR041328 ResE, histidine kinase sensor domain Clocl_1461 IPR000014 PAS domain Clocl_1461 IPR035965 PAS domain superfamily Clocl_1461 IPR013767 PAS fold Clocl_1461 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Clocl_1461 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Clocl_1461 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clocl_1461 IPR003594 Histidine kinase/HSP90-like ATPase Clocl_1461 IPR003660 HAMP domain Clocl_1463 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily Clocl_1463 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal Clocl_1463 IPR036291 NAD(P)-binding domain superfamily Clocl_1463 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain Clocl_1463 IPR000304 Pyrroline-5-carboxylate reductase Clocl_1464 IPR012337 Ribonuclease H-like superfamily Clocl_1464 IPR002156 Ribonuclease H domain Clocl_1464 IPR022892 Ribonuclease HI Clocl_1464 IPR036397 Ribonuclease H superfamily Clocl_1465 IPR004385 Nucleoside diphosphate pyrophosphatase Clocl_1465 IPR015797 NUDIX hydrolase-like domain superfamily Clocl_1465 IPR020084 NUDIX hydrolase, conserved site Clocl_1465 IPR000086 NUDIX hydrolase domain Clocl_1466 IPR014196 Stage II sporulation protein M Clocl_1466 IPR002798 Stage II sporulation protein M-like Clocl_1467 IPR023009 Tyrosine recombinase XerC/XerD Clocl_1467 IPR011932 Tyrosine recombinase XerD Clocl_1467 IPR004107 Integrase, SAM-like, N-terminal Clocl_1467 IPR010998 Integrase/recombinase, N-terminal Clocl_1467 IPR002104 Integrase, catalytic domain Clocl_1467 IPR013762 Integrase-like, catalytic domain superfamily Clocl_1467 IPR011010 DNA breaking-rejoining enzyme, catalytic core Clocl_1468 IPR024052 Phosphopentomutase DeoB cap domain superfamily Clocl_1468 IPR010045 Phosphopentomutase Clocl_1468 IPR017850 Alkaline-phosphatase-like, core domain superfamily Clocl_1468 IPR006124 Metalloenzyme Clocl_1469 IPR000312 Glycosyl transferase, family 3 Clocl_1469 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Clocl_1469 IPR017459 Glycosyl transferase family 3, N-terminal domain Clocl_1469 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase Clocl_1469 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site Clocl_1469 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic Clocl_1469 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal Clocl_1469 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily Clocl_1469 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Clocl_1470 IPR015956 Penicillin-binding protein, C-terminal domain superfamily Clocl_1470 IPR012338 Beta-lactamase/transpeptidase-like Clocl_1470 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A Clocl_1470 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal Clocl_1470 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal Clocl_1470 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily Clocl_1474 IPR041628 ChlI/MoxR, AAA lid domain Clocl_1474 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_1474 IPR011703 ATPase, AAA-3 Clocl_1478 IPR001584 Integrase, catalytic core Clocl_1478 IPR025246 Transposase IS30-like HTH domain Clocl_1478 IPR036397 Ribonuclease H superfamily Clocl_1478 IPR001598 Transposase, IS30, conserved site Clocl_1478 IPR012337 Ribonuclease H-like superfamily Clocl_1480 IPR001137 Glycoside hydrolase family 11 Clocl_1480 IPR033123 Glycosyl hydrolases family 11 (GH11) domain Clocl_1480 IPR013319 Glycoside hydrolase family 11/12 Clocl_1480 IPR008979 Galactose-binding-like domain superfamily Clocl_1480 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Clocl_1480 IPR005084 Carbohydrate binding module family 6 Clocl_1480 IPR006584 Cellulose binding, type IV Clocl_1480 IPR033119 Glycoside hydrolase family 11, active site 2 Clocl_1480 IPR018208 Glycoside hydrolase family 11, active site 1 Clocl_1481 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal Clocl_1481 IPR029066 PLP-binding barrel Clocl_1481 IPR000183 Ornithine/DAP/Arg decarboxylase Clocl_1481 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Clocl_1481 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal Clocl_1481 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Clocl_1481 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal Clocl_1481 IPR002986 Diaminopimelate decarboxylase, LysA Clocl_1482 IPR007484 Peptidase M28 Clocl_1483 IPR000644 CBS domain Clocl_1483 IPR001667 DDH domain Clocl_1483 IPR003156 DHHA1 domain Clocl_1483 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Clocl_1483 IPR002646 Poly A polymerase, head domain Clocl_1483 IPR038763 DHH phosphoesterase superfamily Clocl_1484 IPR008915 Peptidase M50 Clocl_1485 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site Clocl_1485 IPR002305 Aminoacyl-tRNA synthetase, class Ic Clocl_1485 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clocl_1485 IPR002306 Tryptophan-tRNA ligase Clocl_1486 IPR003768 Segregation and condensation protein A Clocl_1487 IPR005234 Chromosome segregation/condensation protein ScpB Clocl_1487 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_1487 IPR036390 Winged helix DNA-binding domain superfamily Clocl_1489 IPR014229 Sporulation protein YtfJ Clocl_1490 IPR002942 RNA-binding S4 domain Clocl_1490 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain Clocl_1490 IPR020103 Pseudouridine synthase, catalytic domain superfamily Clocl_1490 IPR006145 Pseudouridine synthase, RsuA/RluA Clocl_1490 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F Clocl_1490 IPR036986 RNA-binding S4 domain superfamily Clocl_1490 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site Clocl_1492 IPR037163 Spermidine synthase, tetramerisation domain superfamily Clocl_1492 IPR030374 Polyamine biosynthesis domain Clocl_1492 IPR030373 Polyamine biosynthesis domain, conserved site Clocl_1492 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clocl_1492 IPR001045 Spermidine/spermine synthases Clocl_1492 IPR035246 Spermidine synthase, tetramerisation domain Clocl_1493 IPR020855 Ureohydrolase, manganese-binding site Clocl_1493 IPR005925 Agmatinase-related Clocl_1493 IPR006035 Ureohydrolase Clocl_1493 IPR023696 Ureohydrolase domain superfamily Clocl_1494 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clocl_1494 IPR010719 Putative rRNA methylase Clocl_1496 IPR034733 Acetyl-CoA carboxylase Clocl_1496 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit Clocl_1496 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal Clocl_1496 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal Clocl_1496 IPR029045 ClpP/crotonase-like domain superfamily Clocl_1498 IPR000089 Biotin/lipoyl attachment Clocl_1498 IPR011053 Single hybrid motif Clocl_1498 IPR001882 Biotin-binding site Clocl_1499 IPR013785 Aldolase-type TIM barrel Clocl_1499 IPR001882 Biotin-binding site Clocl_1499 IPR000089 Biotin/lipoyl attachment Clocl_1499 IPR003379 Carboxylase, conserved domain Clocl_1499 IPR005776 Oxaloacetate decarboxylase, alpha subunit Clocl_1499 IPR000891 Pyruvate carboxyltransferase Clocl_1499 IPR011053 Single hybrid motif Clocl_1505 IPR039552 Transposase IS66, C-terminal Clocl_1505 IPR024474 Zinc-finger binding domain of transposase IS66 Clocl_1505 IPR024463 Transposase TnpC, homeodomain Clocl_1505 IPR004291 Transposase, IS66 Clocl_1506 IPR008878 Transposase IS66, Orf2 Clocl_1516 IPR009057 Homeobox-like domain superfamily Clocl_1516 IPR002514 Transposase IS3/IS911family Clocl_1517 IPR008878 Transposase IS66, Orf2 Clocl_1520 IPR006530 YD repeat Clocl_1520 IPR022385 Rhs repeat-associated core Clocl_1520 IPR008979 Galactose-binding-like domain superfamily Clocl_1520 IPR031325 RHS repeat Clocl_1527 IPR002514 Transposase IS3/IS911family Clocl_1527 IPR009057 Homeobox-like domain superfamily Clocl_1528 IPR008878 Transposase IS66, Orf2 Clocl_1543 IPR001119 S-layer homology domain Clocl_1543 IPR017853 Glycoside hydrolase superfamily Clocl_1543 IPR003305 Carbohydrate-binding, CenC-like Clocl_1543 IPR031158 Glycosyl hydrolases family 10, active site Clocl_1543 IPR001000 Glycoside hydrolase family 10 domain Clocl_1543 IPR018087 Glycoside hydrolase, family 5, conserved site Clocl_1543 IPR010502 Carbohydrate-binding domain, family 9 Clocl_1543 IPR008979 Galactose-binding-like domain superfamily Clocl_1546 IPR008878 Transposase IS66, Orf2 Clocl_1547 IPR002514 Transposase IS3/IS911family Clocl_1547 IPR009057 Homeobox-like domain superfamily Clocl_1548 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding Clocl_1548 IPR033479 Double Cache domain 1 Clocl_1548 IPR029151 Periplasmic sensor-like domain superfamily Clocl_1548 IPR003660 HAMP domain Clocl_1548 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Clocl_1549 IPR004090 Chemotaxis methyl-accepting receptor Clocl_1549 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily Clocl_1549 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding Clocl_1549 IPR003660 HAMP domain Clocl_1549 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site Clocl_1549 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Clocl_1557 IPR000594 THIF-type NAD/FAD binding fold Clocl_1557 IPR035985 Ubiquitin-activating enzyme Clocl_1559 IPR003593 AAA+ ATPase domain Clocl_1559 IPR003439 ABC transporter-like Clocl_1559 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_1560 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_1560 IPR000524 Transcription regulator HTH, GntR Clocl_1560 IPR036390 Winged helix DNA-binding domain superfamily Clocl_1561 IPR011435 Na(+), Li(+), K(+)/H(+) antiporter subunit A/B Clocl_1564 IPR013780 Glycosyl hydrolase, all-beta Clocl_1564 IPR017853 Glycoside hydrolase superfamily Clocl_1564 IPR024745 Glycoside hydrolase, family 44 Clocl_1564 IPR036966 Carbohydrate-binding module 3 superfamily Clocl_1564 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clocl_1564 IPR001956 Carbohydrate-binding module 3 Clocl_1565 IPR023346 Lysozyme-like domain superfamily Clocl_1565 IPR011055 Duplicated hybrid motif Clocl_1565 IPR010090 Phage tail tape measure protein Clocl_1565 IPR016047 Peptidase M23 Clocl_1565 IPR000189 Prokaryotic transglycosylase, active site Clocl_1565 IPR008258 Transglycosylase SLT domain 1 Clocl_1566 IPR001956 Carbohydrate-binding module 3 Clocl_1566 IPR033126 Glycosyl hydrolases family 9, Asp/Glu active sites Clocl_1566 IPR001701 Glycoside hydrolase family 9 Clocl_1566 IPR012341 Six-hairpin glycosidase-like superfamily Clocl_1566 IPR008928 Six-hairpin glycosidase superfamily Clocl_1566 IPR036966 Carbohydrate-binding module 3 superfamily Clocl_1566 IPR018221 Glycoside hydrolase family 9, His active site Clocl_1566 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clocl_1567 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clocl_1567 IPR033126 Glycosyl hydrolases family 9, Asp/Glu active sites Clocl_1567 IPR036439 Dockerin domain superfamily Clocl_1567 IPR012341 Six-hairpin glycosidase-like superfamily Clocl_1567 IPR008928 Six-hairpin glycosidase superfamily Clocl_1567 IPR001956 Carbohydrate-binding module 3 Clocl_1567 IPR036966 Carbohydrate-binding module 3 superfamily Clocl_1567 IPR002105 Dockerin type I repeat Clocl_1567 IPR016134 Dockerin domain Clocl_1567 IPR018221 Glycoside hydrolase family 9, His active site Clocl_1567 IPR018247 EF-Hand 1, calcium-binding site Clocl_1567 IPR001701 Glycoside hydrolase family 9 Clocl_1570 IPR013785 Aldolase-type TIM barrel Clocl_1570 IPR010722 Biotin and thiamin synthesis-associated domain Clocl_1570 IPR007197 Radical SAM Clocl_1570 IPR012726 Thiazole biosynthesis ThiH Clocl_1570 IPR034428 ThiH/NocL/HydG-like Clocl_1571 IPR003346 Transposase, IS116/IS110/IS902 Clocl_1571 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal Clocl_1572 IPR013785 Aldolase-type TIM barrel Clocl_1572 IPR010722 Biotin and thiamin synthesis-associated domain Clocl_1572 IPR006638 Elp3/MiaB/NifB Clocl_1572 IPR024021 [FeFe]-hydrogenase maturation HydE, radical SAM Clocl_1572 IPR034422 HydE/PylB-like Clocl_1572 IPR007197 Radical SAM Clocl_1573 IPR004708 Aspartate ammonia-lyase Clocl_1573 IPR024083 Fumarase/histidase, N-terminal Clocl_1573 IPR018951 Fumarase C, C-terminal Clocl_1573 IPR008948 L-Aspartase-like Clocl_1573 IPR022761 Fumarate lyase, N-terminal Clocl_1573 IPR020557 Fumarate lyase, conserved site Clocl_1573 IPR000362 Fumarate lyase family Clocl_1574 IPR005225 Small GTP-binding protein domain Clocl_1574 IPR031168 TrmE-type guanine nucleotide-binding domain Clocl_1574 IPR018948 GTP-binding protein TrmE, N-terminal Clocl_1574 IPR006073 GTP binding domain Clocl_1574 IPR004520 tRNA modification GTPase MnmE Clocl_1574 IPR027368 tRNA modification GTPase MnmE domain 2 Clocl_1574 IPR025867 MnmE, helical domain Clocl_1574 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_1574 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 Clocl_1575 IPR015424 Pyridoxal phosphate-dependent transferase Clocl_1575 IPR000192 Aminotransferase class V domain Clocl_1575 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Clocl_1575 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Clocl_1575 IPR010970 Cysteine desulfurase, SufS Clocl_1580 IPR004703 Phosphotransferase system, sugar-specific permease component Clocl_1580 IPR013014 Phosphotransferase system, EIIC component, type 2 Clocl_1580 IPR013853 Galactitol permease IIC component Clocl_1582 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_1582 IPR017871 ABC transporter, conserved site Clocl_1582 IPR003439 ABC transporter-like Clocl_1582 IPR003593 AAA+ ATPase domain Clocl_1583 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Clocl_1583 IPR035906 MetI-like superfamily Clocl_1586 IPR036852 Peptidase S8/S53 domain superfamily Clocl_1586 IPR034084 Thermitase-like, domain Clocl_1586 IPR015500 Peptidase S8, subtilisin-related Clocl_1586 IPR023828 Peptidase S8, subtilisin, Ser-active site Clocl_1586 IPR000209 Peptidase S8/S53 domain Clocl_1586 IPR023827 Peptidase S8, subtilisin, Asp-active site Clocl_1586 IPR022398 Peptidase S8, subtilisin, His-active site Clocl_1597 IPR001584 Integrase, catalytic core Clocl_1597 IPR017894 HTH domain, IS21 transposase-type Clocl_1598 IPR001270 ClpA/B family Clocl_1598 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein Clocl_1598 IPR002611 IstB-like ATP-binding protein Clocl_1598 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_1598 IPR003593 AAA+ ATPase domain Clocl_1604 IPR008878 Transposase IS66, Orf2 Clocl_1616 IPR001207 Transposase, mutator type Clocl_1619 IPR008878 Transposase IS66, Orf2 Clocl_1620 IPR009057 Homeobox-like domain superfamily Clocl_1620 IPR002514 Transposase IS3/IS911family Clocl_1626 IPR036397 Ribonuclease H superfamily Clocl_1626 IPR001598 Transposase, IS30, conserved site Clocl_1626 IPR025246 Transposase IS30-like HTH domain Clocl_1626 IPR001584 Integrase, catalytic core Clocl_1626 IPR012337 Ribonuclease H-like superfamily Clocl_1628 IPR041256 CDI immunity protein Clocl_1633 IPR041256 CDI immunity protein Clocl_1639 IPR002514 Transposase IS3/IS911family Clocl_1639 IPR009057 Homeobox-like domain superfamily Clocl_1640 IPR008878 Transposase IS66, Orf2 Clocl_1652 IPR012337 Ribonuclease H-like superfamily Clocl_1652 IPR036397 Ribonuclease H superfamily Clocl_1652 IPR017894 HTH domain, IS21 transposase-type Clocl_1652 IPR001584 Integrase, catalytic core Clocl_1653 IPR003593 AAA+ ATPase domain Clocl_1653 IPR001270 ClpA/B family Clocl_1653 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein Clocl_1653 IPR002611 IstB-like ATP-binding protein Clocl_1653 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_1655 IPR010758 Trans-2-enoyl-CoA reductase Clocl_1655 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative Clocl_1655 IPR024906 Enoyl reductase FAD binding domain Clocl_1664 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 Clocl_1664 IPR036908 RlpA-like domain superfamily Clocl_1664 IPR011098 G5 domain Clocl_1664 IPR010611 3D domain Clocl_1665 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_1665 IPR003783 Regulatory protein RecX Clocl_1667 IPR003810 Putative manganese efflux pump Clocl_1667 IPR022929 Putative manganese efflux pump MntP Clocl_1671 IPR036573 Carbohydrate-binding module superfamily 5/12 Clocl_1671 IPR003961 Fibronectin type III Clocl_1671 IPR036116 Fibronectin type III superfamily Clocl_1671 IPR001223 Glycoside hydrolase family 18, catalytic domain Clocl_1671 IPR001579 Glycoside hydrolase, chitinase active site Clocl_1671 IPR011583 Chitinase II Clocl_1671 IPR003610 Carbohydrate-binding module family 5/12 Clocl_1671 IPR017853 Glycoside hydrolase superfamily Clocl_1671 IPR013783 Immunoglobulin-like fold Clocl_1676 IPR036615 Mur ligase, C-terminal domain superfamily Clocl_1676 IPR036565 Mur-like, catalytic domain superfamily Clocl_1676 IPR013221 Mur ligase, central Clocl_1676 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase Clocl_1681 IPR008007 Peptidase M42 Clocl_1681 IPR023367 Peptidase M42, domain 2 Clocl_1682 IPR008007 Peptidase M42 Clocl_1682 IPR023367 Peptidase M42, domain 2 Clocl_1683 IPR008007 Peptidase M42 Clocl_1683 IPR023367 Peptidase M42, domain 2 Clocl_1686 IPR022712 Beta-Casp domain Clocl_1686 IPR001279 Metallo-beta-lactamase Clocl_1686 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain Clocl_1686 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Clocl_1687 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC Clocl_1687 IPR013216 Methyltransferase type 11 Clocl_1687 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clocl_1688 IPR029045 ClpP/crotonase-like domain superfamily Clocl_1688 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site Clocl_1688 IPR001753 Enoyl-CoA hydratase/isomerase Clocl_1688 IPR014748 Enoyl-CoA hydratase, C-terminal Clocl_1688 IPR022852 Carnitinyl-CoA dehydratase Clocl_1692 IPR000477 Reverse transcriptase domain Clocl_1695 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily Clocl_1695 IPR003356 DNA methylase, adenine-specific Clocl_1695 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clocl_1696 IPR000055 Restriction endonuclease, type I, HsdS Clocl_1698 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal Clocl_1698 IPR021810 Protein of unknown function DUF3387 Clocl_1698 IPR004473 Restriction endonuclease, type I, HsdR Clocl_1698 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_1698 IPR014001 Helicase superfamily 1/2, ATP-binding domain Clocl_1698 IPR040980 SWI2/SNF2 ATPase Clocl_1702 IPR036515 Transposase IS200-like superfamily Clocl_1702 IPR002686 Transposase IS200-like Clocl_1703 IPR017894 HTH domain, IS21 transposase-type Clocl_1703 IPR001584 Integrase, catalytic core Clocl_1703 IPR012337 Ribonuclease H-like superfamily Clocl_1704 IPR013159 Chromosomal replication initiator, DnaA C-terminal Clocl_1704 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_1704 IPR038454 DnaA, N-terminal domain superfamily Clocl_1704 IPR024633 DnaA N-terminal domain Clocl_1704 IPR013317 Chromosomal replication initiator protein DnaA Clocl_1704 IPR001957 Chromosomal replication control, initiator DnaA Clocl_1704 IPR020591 Chromosomal replication control, initiator DnaA-like Clocl_1704 IPR010921 Trp repressor/replication initiator Clocl_1704 IPR003593 AAA+ ATPase domain Clocl_1704 IPR018312 Chromosomal replication control, initiator DnaA, conserved site Clocl_1706 IPR024370 PBP domain Clocl_1707 IPR035906 MetI-like superfamily Clocl_1707 IPR011864 Phosphate ABC transporter, permease protein PstC Clocl_1707 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Clocl_1708 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Clocl_1708 IPR035906 MetI-like superfamily Clocl_1708 IPR005672 Phosphate transport system permease protein PstA Clocl_1709 IPR015850 ABC transporter, phosphate import, PstB Clocl_1709 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_1709 IPR017871 ABC transporter, conserved site Clocl_1709 IPR005670 Phosphate transport system permease protein 1 Clocl_1709 IPR003593 AAA+ ATPase domain Clocl_1709 IPR003439 ABC transporter-like Clocl_1710 IPR028366 Phosphate transport system protein PhoU Clocl_1710 IPR038078 PhoU-like domain superfamily Clocl_1710 IPR026022 PhoU domain Clocl_1711 IPR039420 Transcriptional regulatory protein WalR-like Clocl_1711 IPR011006 CheY-like superfamily Clocl_1711 IPR001867 OmpR/PhoB-type DNA-binding domain Clocl_1711 IPR016032 Signal transduction response regulator, C-terminal effector Clocl_1711 IPR001789 Signal transduction response regulator, receiver domain Clocl_1711 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_1712 IPR031967 PhoR, single Cache-like domain Clocl_1712 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Clocl_1712 IPR003594 Histidine kinase/HSP90-like ATPase Clocl_1712 IPR000014 PAS domain Clocl_1712 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clocl_1712 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Clocl_1712 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Clocl_1712 IPR013767 PAS fold Clocl_1712 IPR005467 Histidine kinase domain Clocl_1712 IPR035965 PAS domain superfamily Clocl_1715 IPR003593 AAA+ ATPase domain Clocl_1715 IPR003439 ABC transporter-like Clocl_1715 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_1715 IPR017871 ABC transporter, conserved site Clocl_1717 IPR010982 Lambda repressor-like, DNA-binding domain superfamily Clocl_1717 IPR001387 Cro/C1-type helix-turn-helix domain Clocl_1719 IPR000873 AMP-dependent synthetase/ligase Clocl_1719 IPR020845 AMP-binding, conserved site Clocl_1719 IPR042099 AMP-dependent synthetase-like superfamily Clocl_1720 IPR016192 APOBEC/CMP deaminase, zinc-binding Clocl_1720 IPR002125 Cytidine and deoxycytidylate deaminase domain Clocl_1720 IPR006262 Cytidine deaminase, homotetrameric Clocl_1720 IPR016193 Cytidine deaminase-like Clocl_1721 IPR001851 ABC transporter, permease Clocl_1722 IPR001851 ABC transporter, permease Clocl_1722 IPR002229 Blood group Rhesus C/E/D polypeptide Clocl_1723 IPR017871 ABC transporter, conserved site Clocl_1723 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_1723 IPR003439 ABC transporter-like Clocl_1723 IPR003593 AAA+ ATPase domain Clocl_1724 IPR012839 Organic radical enzyme activase Clocl_1724 IPR034457 Organic radical-activating enzymes Clocl_1724 IPR023912 Putative glycyl-radical enzyme activating enzyme YjjW Clocl_1724 IPR001989 Radical-activating enzyme, conserved site Clocl_1724 IPR007197 Radical SAM Clocl_1724 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clocl_1724 IPR013785 Aldolase-type TIM barrel Clocl_1724 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clocl_1725 IPR016905 Glycyl radical enzyme, HI0521, predicted Clocl_1726 IPR028082 Periplasmic binding protein-like I Clocl_1726 IPR003760 ABC transporter substrate-binding protein PnrA-like Clocl_1727 IPR018016 Nucleoside phosphorylase, conserved site Clocl_1727 IPR004402 Purine nucleoside phosphorylase DeoD-type Clocl_1727 IPR035994 Nucleoside phosphorylase superfamily Clocl_1727 IPR000845 Nucleoside phosphorylase domain Clocl_1732 IPR041532 RlmI, PUA-like domain Clocl_1732 IPR023542 rRNA large subunit methyltransferase I Clocl_1732 IPR002478 PUA domain Clocl_1732 IPR015947 PUA-like superfamily Clocl_1732 IPR036974 PUA domain superfamily Clocl_1732 IPR019614 S-adenosylmethionine-dependent methyltransferase Clocl_1732 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clocl_1735 IPR011880 Phenylacetate-CoA ligase Clocl_1735 IPR042099 AMP-dependent synthetase-like superfamily Clocl_1735 IPR028154 AMP-dependent ligase, C-terminal Clocl_1735 IPR000873 AMP-dependent synthetase/ligase Clocl_1737 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal Clocl_1737 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_1737 IPR003959 ATPase, AAA-type, core Clocl_1737 IPR032423 AAA C-terminal domain Clocl_1737 IPR003593 AAA+ ATPase domain Clocl_1737 IPR021886 MgsA AAA+ ATPase C-terminal Clocl_1740 IPR020612 Methylthiotransferase, conserved site Clocl_1740 IPR002792 TRAM domain Clocl_1740 IPR007197 Radical SAM Clocl_1740 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB Clocl_1740 IPR038135 Methylthiotransferase, N-terminal domain superfamily Clocl_1740 IPR013848 Methylthiotransferase, N-terminal Clocl_1740 IPR006638 Elp3/MiaB/NifB Clocl_1740 IPR023404 Radical SAM, alpha/beta horseshoe Clocl_1740 IPR005839 Methylthiotransferase Clocl_1742 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_1742 IPR007860 DNA mismatch repair protein MutS, connector domain Clocl_1742 IPR005748 DNA mismatch repair protein MutS Clocl_1742 IPR007695 DNA mismatch repair protein MutS-like, N-terminal Clocl_1742 IPR017261 DNA mismatch repair protein MutS/MSH Clocl_1742 IPR000432 DNA mismatch repair protein MutS, C-terminal Clocl_1742 IPR007861 DNA mismatch repair protein MutS, clamp Clocl_1742 IPR007696 DNA mismatch repair protein MutS, core Clocl_1742 IPR016151 DNA mismatch repair protein MutS, N-terminal Clocl_1742 IPR036187 DNA mismatch repair protein MutS, core domain superfamily Clocl_1742 IPR036678 MutS, connector domain superfamily Clocl_1743 IPR020667 DNA mismatch repair protein, MutL Clocl_1743 IPR002099 DNA mismatch repair protein family, N-terminal Clocl_1743 IPR037198 MutL, C-terminal domain superfamily Clocl_1743 IPR013507 DNA mismatch repair protein, S5 domain 2-like Clocl_1743 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clocl_1743 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms Clocl_1743 IPR014790 MutL, C-terminal, dimerisation Clocl_1743 IPR042120 MutL, C-terminal domain, dimerisation subdomain Clocl_1743 IPR042121 MutL, C-terminal domain, regulatory subdomain Clocl_1743 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Clocl_1743 IPR020568 Ribosomal protein S5 domain 2-type fold Clocl_1743 IPR014762 DNA mismatch repair, conserved site Clocl_1744 IPR018022 IPP transferase Clocl_1744 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_1744 IPR039657 Dimethylallyltransferase Clocl_1745 IPR010920 LSM domain superfamily Clocl_1745 IPR005001 RNA-binding protein Hfq Clocl_1746 IPR006197 Peptidase S24, LexA-like Clocl_1746 IPR036286 LexA/Signal peptidase-like superfamily Clocl_1746 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_1746 IPR036390 Winged helix DNA-binding domain superfamily Clocl_1746 IPR039418 LexA-like Clocl_1746 IPR006200 Transcription regulator LexA Clocl_1746 IPR011991 ArsR-like helix-turn-helix domain Clocl_1746 IPR006199 LexA repressor, DNA-binding domain Clocl_1746 IPR015927 Peptidase S24/S26A/S26B/S26C Clocl_1747 IPR007921 CHAP domain Clocl_1747 IPR018392 LysM domain Clocl_1747 IPR036779 LysM domain superfamily Clocl_1747 IPR038765 Papain-like cysteine peptidase superfamily Clocl_1752 IPR014286 RNA polymerase sigma-70 RpoE type Clocl_1752 IPR007627 RNA polymerase sigma-70 region 2 Clocl_1752 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 Clocl_1752 IPR013325 RNA polymerase sigma factor, region 2 Clocl_1752 IPR013324 RNA polymerase sigma factor, region 3/4-like Clocl_1752 IPR039425 RNA polymerase sigma-70 like Clocl_1752 IPR014284 RNA polymerase sigma-70 like domain Clocl_1752 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_1752 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site Clocl_1758 IPR013324 RNA polymerase sigma factor, region 3/4-like Clocl_1758 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_1758 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like Clocl_1759 IPR004125 Signal recognition particle, SRP54 subunit, M-domain Clocl_1759 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_1759 IPR003593 AAA+ ATPase domain Clocl_1759 IPR013822 Signal recognition particle SRP54, helical bundle Clocl_1759 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily Clocl_1759 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily Clocl_1759 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain Clocl_1759 IPR022941 Signal recognition particle, SRP54 subunit Clocl_1759 IPR004780 Signal recognition particle protein Clocl_1760 IPR023803 Ribosomal protein S16 domain superfamily Clocl_1760 IPR000307 Ribosomal protein S16 Clocl_1760 IPR020592 Ribosomal protein S16, conserved site Clocl_1761 IPR009019 K homology domain superfamily, prokaryotic type Clocl_1761 IPR020627 Uncharacterised protein family UPF0109 Clocl_1761 IPR015946 K homology domain-like, alpha/beta Clocl_1762 IPR009000 Translation protein, beta-barrel domain superfamily Clocl_1762 IPR002676 RimM, N-terminal Clocl_1762 IPR011961 16S rRNA processing protein RimM Clocl_1762 IPR036976 RimM, N-terminal domain superfamily Clocl_1762 IPR027275 PRC-barrel domain Clocl_1762 IPR011033 PRC-barrel-like superfamily Clocl_1763 IPR029028 Alpha/beta knot methyltransferases Clocl_1763 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria Clocl_1763 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Clocl_1763 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal Clocl_1763 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain Clocl_1766 IPR003370 Chromate transporter Clocl_1766 IPR014047 Chromate transporter, long chain Clocl_1769 IPR002528 Multi antimicrobial extrusion protein Clocl_1771 IPR013785 Aldolase-type TIM barrel Clocl_1771 IPR011060 Ribulose-phosphate binding barrel Clocl_1771 IPR004651 Histidine biosynthesis, HisF Clocl_1771 IPR006062 Histidine biosynthesis Clocl_1776 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase Clocl_1776 IPR036979 Chorismate mutase domain superfamily Clocl_1776 IPR002701 Chorismate mutase II, prokaryotic-type Clocl_1776 IPR001086 Prephenate dehydratase Clocl_1776 IPR018528 Prephenate dehydratase, conserved site Clocl_1776 IPR002912 ACT domain Clocl_1776 IPR036263 Chorismate mutase type II superfamily Clocl_1778 IPR013784 Carbohydrate-binding-like fold Clocl_1778 IPR013783 Immunoglobulin-like fold Clocl_1778 IPR004300 Glycoside hydrolase family 57, N-terminal domain Clocl_1778 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel Clocl_1778 IPR036116 Fibronectin type III superfamily Clocl_1778 IPR003961 Fibronectin type III Clocl_1778 IPR002044 Carbohydrate binding module family 20 Clocl_1778 IPR005085 Carbohydrate binding module family 25 Clocl_1779 IPR003660 HAMP domain Clocl_1779 IPR004090 Chemotaxis methyl-accepting receptor Clocl_1779 IPR033463 Single cache domain 3 Clocl_1779 IPR029151 Periplasmic sensor-like domain superfamily Clocl_1779 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Clocl_1780 IPR007391 Vancomycin resistance VanW Clocl_1783 IPR006367 Sirohaem synthase, N-terminal Clocl_1783 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase Clocl_1783 IPR036291 NAD(P)-binding domain superfamily Clocl_1783 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase Clocl_1783 IPR018214 Glutamyl-tRNA reductase, conserved site Clocl_1783 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal Clocl_1783 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily Clocl_1784 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase Clocl_1784 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase Clocl_1784 IPR018214 Glutamyl-tRNA reductase, conserved site Clocl_1784 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily Clocl_1784 IPR036291 NAD(P)-binding domain superfamily Clocl_1784 IPR006367 Sirohaem synthase, N-terminal Clocl_1784 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal Clocl_1785 IPR022417 Porphobilinogen deaminase, N-terminal Clocl_1785 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily Clocl_1785 IPR022418 Porphobilinogen deaminase, C-terminal Clocl_1785 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site Clocl_1785 IPR000860 Porphobilinogen deaminase Clocl_1786 IPR006366 Uroporphyrin-III C-methyltransferase Clocl_1786 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase Clocl_1786 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily Clocl_1786 IPR035996 Tetrapyrrole methylase superfamily Clocl_1786 IPR000878 Tetrapyrrole methylase Clocl_1786 IPR014777 Tetrapyrrole methylase, subdomain 1 Clocl_1786 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site Clocl_1786 IPR014776 Tetrapyrrole methylase, subdomain 2 Clocl_1787 IPR001731 Delta-aminolevulinic acid dehydratase Clocl_1787 IPR030656 Delta-aminolevulinic acid dehydratase, active site Clocl_1787 IPR013785 Aldolase-type TIM barrel Clocl_1788 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Clocl_1788 IPR015424 Pyridoxal phosphate-dependent transferase Clocl_1788 IPR005814 Aminotransferase class-III Clocl_1788 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Clocl_1788 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase Clocl_1790 IPR005801 ADC synthase Clocl_1790 IPR019999 Anthranilate synthase component I-like Clocl_1790 IPR015890 Chorismate-utilising enzyme, C-terminal Clocl_1791 IPR001544 Aminotransferase class IV Clocl_1791 IPR036038 Aminotransferase-like, PLP-dependent enzymes Clocl_1793 IPR017894 HTH domain, IS21 transposase-type Clocl_1793 IPR012337 Ribonuclease H-like superfamily Clocl_1793 IPR001584 Integrase, catalytic core Clocl_1794 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein Clocl_1794 IPR002611 IstB-like ATP-binding protein Clocl_1794 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_1794 IPR001270 ClpA/B family Clocl_1794 IPR003593 AAA+ ATPase domain Clocl_1795 IPR017853 Glycoside hydrolase superfamily Clocl_1795 IPR013780 Glycosyl hydrolase, all-beta Clocl_1795 IPR001139 Glycoside hydrolase family 30 Clocl_1795 IPR033452 Glycosyl hydrolase family 30, beta sandwich domain Clocl_1796 IPR000846 Dihydrodipicolinate reductase, N-terminal Clocl_1796 IPR022664 Dihydrodipicolinate reductase, conserved site Clocl_1796 IPR036291 NAD(P)-binding domain superfamily Clocl_1796 IPR022663 Dihydrodipicolinate reductase, C-terminal Clocl_1796 IPR023940 Dihydrodipicolinate reductase Clocl_1797 IPR010998 Integrase/recombinase, N-terminal Clocl_1797 IPR011010 DNA breaking-rejoining enzyme, catalytic core Clocl_1797 IPR013762 Integrase-like, catalytic domain superfamily Clocl_1797 IPR004107 Integrase, SAM-like, N-terminal Clocl_1797 IPR002104 Integrase, catalytic domain Clocl_1799 IPR002102 Cellulosome anchoring protein, cohesin domain Clocl_1799 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clocl_1799 IPR001119 S-layer homology domain Clocl_1800 IPR004568 Phosphopantetheine-protein transferase domain Clocl_1800 IPR037143 4'-phosphopantetheinyl transferase domain superfamily Clocl_1800 IPR008278 4'-phosphopantetheinyl transferase domain Clocl_1802 IPR000524 Transcription regulator HTH, GntR Clocl_1802 IPR036390 Winged helix DNA-binding domain superfamily Clocl_1802 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_1802 IPR011663 UbiC transcription regulator-associated Clocl_1802 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Clocl_1803 IPR020557 Fumarate lyase, conserved site Clocl_1803 IPR000362 Fumarate lyase family Clocl_1803 IPR022761 Fumarate lyase, N-terminal Clocl_1803 IPR008948 L-Aspartase-like Clocl_1803 IPR004769 Adenylosuccinate lyase Clocl_1803 IPR019468 Adenylosuccinate lyase C-terminal Clocl_1803 IPR024083 Fumarase/histidase, N-terminal Clocl_1804 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Clocl_1804 IPR015424 Pyridoxal phosphate-dependent transferase Clocl_1804 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site Clocl_1804 IPR004839 Aminotransferase, class I/classII Clocl_1804 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Clocl_1805 IPR000180 Membrane dipeptidase, active site Clocl_1805 IPR032466 Metal-dependent hydrolase Clocl_1805 IPR008257 Peptidase M19 Clocl_1806 IPR001701 Glycoside hydrolase family 9 Clocl_1806 IPR036966 Carbohydrate-binding module 3 superfamily Clocl_1806 IPR008928 Six-hairpin glycosidase superfamily Clocl_1806 IPR012341 Six-hairpin glycosidase-like superfamily Clocl_1806 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clocl_1806 IPR001956 Carbohydrate-binding module 3 Clocl_1806 IPR018221 Glycoside hydrolase family 9, His active site Clocl_1806 IPR033126 Glycosyl hydrolases family 9, Asp/Glu active sites Clocl_1807 IPR010994 RuvA domain 2-like Clocl_1807 IPR037518 MPN domain Clocl_1807 IPR020891 Uncharacterised protein family UPF0758, conserved site Clocl_1807 IPR001405 Uncharacterised protein family UPF0758 Clocl_1807 IPR025657 RadC-like JAB domain Clocl_1808 IPR003509 Uncharacterised protein family UPF0102 Clocl_1808 IPR011335 Restriction endonuclease type II-like Clocl_1808 IPR011856 tRNA endonuclease-like domain superfamily Clocl_1809 IPR029025 Type III secretion system substrate exporter, C-terminal Clocl_1809 IPR006135 Type III secretion system substrate exporter Clocl_1809 IPR006136 Flagellar biosynthetic protein FlhB Clocl_1811 IPR002105 Dockerin type I repeat Clocl_1811 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Clocl_1811 IPR008264 Beta-glucanase Clocl_1811 IPR018247 EF-Hand 1, calcium-binding site Clocl_1811 IPR008263 Glycoside hydrolase, family 16, active site Clocl_1811 IPR000757 Glycoside hydrolase family 16 Clocl_1811 IPR036439 Dockerin domain superfamily Clocl_1811 IPR016134 Dockerin domain Clocl_1812 IPR000843 LacI-type HTH domain Clocl_1812 IPR010982 Lambda repressor-like, DNA-binding domain superfamily Clocl_1812 IPR028082 Periplasmic binding protein-like I Clocl_1812 IPR023588 Transcription regulator HTH, PurR Clocl_1813 IPR022898 Ribonuclease HII Clocl_1813 IPR001352 Ribonuclease HII/HIII Clocl_1813 IPR024567 Ribonuclease HII/HIII domain Clocl_1813 IPR012337 Ribonuclease H-like superfamily Clocl_1813 IPR036397 Ribonuclease H superfamily Clocl_1814 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain Clocl_1814 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily Clocl_1814 IPR019991 GTP-binding protein, ribosome biogenesis Clocl_1814 IPR006073 GTP binding domain Clocl_1814 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_1814 IPR016478 GTPase, MTG1 Clocl_1815 IPR036286 LexA/Signal peptidase-like superfamily Clocl_1815 IPR000223 Peptidase S26A, signal peptidase I Clocl_1815 IPR019758 Peptidase S26A, signal peptidase I, conserved site Clocl_1815 IPR019533 Peptidase S26 Clocl_1815 IPR019756 Peptidase S26A, signal peptidase I, serine active site Clocl_1815 IPR019757 Peptidase S26A, signal peptidase I, lysine active site Clocl_1816 IPR038657 Ribosomal protein L19 superfamily Clocl_1816 IPR008991 Translation protein SH3-like domain superfamily Clocl_1816 IPR018257 Ribosomal protein L19, conserved site Clocl_1816 IPR001857 Ribosomal protein L19 Clocl_1817 IPR001598 Transposase, IS30, conserved site Clocl_1817 IPR025246 Transposase IS30-like HTH domain Clocl_1817 IPR012337 Ribonuclease H-like superfamily Clocl_1817 IPR036397 Ribonuclease H superfamily Clocl_1817 IPR001584 Integrase, catalytic core Clocl_1819 IPR036869 Chaperone J-domain superfamily Clocl_1820 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Clocl_1820 IPR042030 Chaperone protein HscC, nucleotide-binding domain Clocl_1820 IPR018181 Heat shock protein 70, conserved site Clocl_1820 IPR013126 Heat shock protein 70 family Clocl_1821 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Clocl_1821 IPR029151 Periplasmic sensor-like domain superfamily Clocl_1821 IPR003660 HAMP domain Clocl_1821 IPR004090 Chemotaxis methyl-accepting receptor Clocl_1821 IPR033479 Double Cache domain 1 Clocl_1823 IPR039286 Exosporium protein C Clocl_1824 IPR026444 Secretion system C-terminal sorting domain Clocl_1824 IPR017853 Glycoside hydrolase superfamily Clocl_1824 IPR022790 Glycosyl hydrolase family 26 domain Clocl_1824 IPR008979 Galactose-binding-like domain superfamily Clocl_1824 IPR005084 Carbohydrate binding module family 6 Clocl_1824 IPR000805 Glycoside hydrolase family 26 Clocl_1826 IPR023059 Foldase protein PrsA Clocl_1826 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type Clocl_1826 IPR027304 Trigger factor/SurA domain superfamily Clocl_1827 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site Clocl_1827 IPR029056 Ribokinase-like Clocl_1827 IPR011611 Carbohydrate kinase PfkB Clocl_1827 IPR002139 Ribokinase/fructokinase Clocl_1829 IPR000453 Chorismate synthase Clocl_1829 IPR035904 Chorismate synthase AroC superfamily Clocl_1829 IPR020541 Chorismate synthase, conserved site Clocl_1830 IPR000623 Shikimate kinase/Threonine synthase-like 1 Clocl_1830 IPR031322 Shikimate kinase/gluconokinase Clocl_1830 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_1831 IPR004474 Cell envelope-related transcriptional attenuator domain Clocl_1831 IPR023734 Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagU Clocl_1832 IPR001948 Peptidase M18 Clocl_1832 IPR023358 Peptidase M18, domain 2 Clocl_1832 IPR022983 M18 family aminopeptidase 1, putative Clocl_1833 IPR006674 HD domain Clocl_1833 IPR003607 HD/PDEase domain Clocl_1833 IPR000160 GGDEF domain Clocl_1833 IPR037522 HD-GYP domain Clocl_1833 IPR029787 Nucleotide cyclase Clocl_1835 IPR024088 Tyrosine-tRNA ligase, bacterial-type Clocl_1835 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clocl_1835 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site Clocl_1835 IPR036986 RNA-binding S4 domain superfamily Clocl_1835 IPR002942 RNA-binding S4 domain Clocl_1835 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 Clocl_1835 IPR002307 Tyrosine-tRNA ligase Clocl_1835 IPR002305 Aminoacyl-tRNA synthetase, class Ic Clocl_1836 IPR004506 tRNA-specific 2-thiouridylase Clocl_1836 IPR023382 Adenine nucleotide alpha hydrolase-like domains Clocl_1836 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clocl_1837 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal Clocl_1838 IPR015424 Pyridoxal phosphate-dependent transferase Clocl_1838 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site Clocl_1838 IPR010240 Cysteine desulfurase IscS Clocl_1838 IPR016454 Cysteine desulfurase Clocl_1838 IPR000192 Aminotransferase class V domain Clocl_1838 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Clocl_1838 IPR017772 Cysteine desulfurase NifS, bacterial/archaeal Clocl_1838 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Clocl_1839 IPR030489 Transcription regulator Rrf2-type, conserved site Clocl_1839 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_1839 IPR036390 Winged helix DNA-binding domain superfamily Clocl_1839 IPR000944 Transcription regulator Rrf2-type Clocl_1842 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal Clocl_1842 IPR000780 MCP methyltransferase, CheR-type Clocl_1842 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal Clocl_1842 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clocl_1843 IPR034907 Nucleoside diphosphate kinase-like domain Clocl_1843 IPR036850 Nucleoside diphosphate kinase-like domain superfamily Clocl_1843 IPR001564 Nucleoside diphosphate kinase Clocl_1844 IPR016067 S-adenosylmethionine decarboxylase, core Clocl_1844 IPR017716 S-adenosylmethionine decarboxylase proenzyme Clocl_1844 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic Clocl_1845 IPR022967 RNA-binding domain, S1 Clocl_1845 IPR003029 S1 domain Clocl_1845 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase Clocl_1845 IPR012340 Nucleic acid-binding, OB-fold Clocl_1847 IPR003136 Cytidylate kinase Clocl_1847 IPR011994 Cytidylate kinase domain Clocl_1847 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_1848 IPR008243 Chorismate mutase, AroH class Clocl_1848 IPR035959 RutC-like superfamily Clocl_1852 IPR036188 FAD/NAD(P)-binding domain superfamily Clocl_1852 IPR023166 HI0933-like insert domain superfamily Clocl_1852 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like Clocl_1853 IPR013078 Histidine phosphatase superfamily, clade-1 Clocl_1853 IPR029033 Histidine phosphatase superfamily Clocl_1853 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site Clocl_1854 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_1854 IPR001347 Sugar isomerase (SIS) Clocl_1854 IPR022821 Transcription regulator HTH, MurR Clocl_1854 IPR000281 Helix-turn-helix protein RpiR Clocl_1854 IPR009057 Homeobox-like domain superfamily Clocl_1854 IPR035472 RpiR-like, SIS domain Clocl_1857 IPR016039 Thiolase-like Clocl_1857 IPR009081 Phosphopantetheine binding ACP domain Clocl_1857 IPR020806 Polyketide synthase, phosphopantetheine-binding domain Clocl_1857 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Clocl_1857 IPR032821 Ketoacyl-synthetase, C-terminal extension Clocl_1857 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Clocl_1857 IPR014030 Beta-ketoacyl synthase, N-terminal Clocl_1857 IPR018201 Beta-ketoacyl synthase, active site Clocl_1857 IPR001242 Condensation domain Clocl_1857 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Clocl_1857 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Clocl_1857 IPR014043 Acyl transferase Clocl_1857 IPR036736 ACP-like superfamily Clocl_1857 IPR001227 Acyl transferase domain superfamily Clocl_1857 IPR014031 Beta-ketoacyl synthase, C-terminal Clocl_1858 IPR042099 AMP-dependent synthetase-like superfamily Clocl_1858 IPR025110 AMP-binding enzyme, C-terminal domain Clocl_1858 IPR020845 AMP-binding, conserved site Clocl_1858 IPR000873 AMP-dependent synthetase/ligase Clocl_1859 IPR016039 Thiolase-like Clocl_1859 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 Clocl_1859 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal Clocl_1859 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Clocl_1860 IPR036736 ACP-like superfamily Clocl_1860 IPR003231 Acyl carrier protein (ACP) Clocl_1860 IPR009081 Phosphopantetheine binding ACP domain Clocl_1861 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Clocl_1861 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal Clocl_1861 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 Clocl_1861 IPR016039 Thiolase-like Clocl_1862 IPR036749 Expansin, cellulose-binding-like domain superfamily Clocl_1862 IPR009009 RlpA-like protein, double-psi beta-barrel domain Clocl_1862 IPR036908 RlpA-like domain superfamily Clocl_1863 IPR016134 Dockerin domain Clocl_1863 IPR001701 Glycoside hydrolase family 9 Clocl_1863 IPR036439 Dockerin domain superfamily Clocl_1863 IPR002105 Dockerin type I repeat Clocl_1863 IPR036966 Carbohydrate-binding module 3 superfamily Clocl_1863 IPR012341 Six-hairpin glycosidase-like superfamily Clocl_1863 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clocl_1863 IPR001956 Carbohydrate-binding module 3 Clocl_1863 IPR033126 Glycosyl hydrolases family 9, Asp/Glu active sites Clocl_1863 IPR008928 Six-hairpin glycosidase superfamily Clocl_1863 IPR018221 Glycoside hydrolase family 9, His active site Clocl_1864 IPR008928 Six-hairpin glycosidase superfamily Clocl_1864 IPR033126 Glycosyl hydrolases family 9, Asp/Glu active sites Clocl_1864 IPR001701 Glycoside hydrolase family 9 Clocl_1864 IPR036966 Carbohydrate-binding module 3 superfamily Clocl_1864 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clocl_1864 IPR012341 Six-hairpin glycosidase-like superfamily Clocl_1864 IPR018221 Glycoside hydrolase family 9, His active site Clocl_1864 IPR001956 Carbohydrate-binding module 3 Clocl_1866 IPR022877 Protein of unknown funcion UPF0173 Clocl_1866 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Clocl_1866 IPR001279 Metallo-beta-lactamase Clocl_1868 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clocl_1868 IPR006076 FAD dependent oxidoreductase Clocl_1868 IPR008471 MnmC-like methyltransferase Clocl_1868 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC Clocl_1868 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal Clocl_1868 IPR036188 FAD/NAD(P)-binding domain superfamily Clocl_1869 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Clocl_1869 IPR032291 Extracellular endo-alpha-(1->5)-L-arabinanase, C-terminal Clocl_1869 IPR006710 Glycoside hydrolase, family 43 Clocl_1870 IPR007300 CidB/LrgB family Clocl_1870 IPR024891 Antiholin-like protein LrgB Clocl_1871 IPR023736 Antiholin-like protein LrgA Clocl_1871 IPR005538 LrgA/CidA family Clocl_1872 IPR027304 Trigger factor/SurA domain superfamily Clocl_1872 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Clocl_1872 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type Clocl_1872 IPR023059 Foldase protein PrsA Clocl_1877 IPR014284 RNA polymerase sigma-70 like domain Clocl_1877 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site Clocl_1877 IPR007627 RNA polymerase sigma-70 region 2 Clocl_1877 IPR013325 RNA polymerase sigma factor, region 2 Clocl_1877 IPR013324 RNA polymerase sigma factor, region 3/4-like Clocl_1877 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_1877 IPR039425 RNA polymerase sigma-70 like Clocl_1877 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 Clocl_1878 IPR022742 Serine aminopeptidase, S33 Clocl_1878 IPR029058 Alpha/Beta hydrolase fold Clocl_1878 IPR024981 Domain of unknown function DUF3887 Clocl_1880 IPR003593 AAA+ ATPase domain Clocl_1880 IPR003439 ABC transporter-like Clocl_1880 IPR017871 ABC transporter, conserved site Clocl_1880 IPR025302 Domain of unknown function DUF4162 Clocl_1880 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_1887 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal Clocl_1887 IPR013785 Aldolase-type TIM barrel Clocl_1887 IPR023753 FAD/NAD(P)-binding domain Clocl_1887 IPR036188 FAD/NAD(P)-binding domain superfamily Clocl_1888 IPR004814 Oligopeptide transporter OPT Clocl_1888 IPR004813 Oligopeptide transporter, OPT superfamily Clocl_1889 IPR001160 Peptidase M20C, Xaa-His dipeptidase Clocl_1889 IPR002933 Peptidase M20 Clocl_1889 IPR011650 Peptidase M20, dimerisation domain Clocl_1890 IPR001940 Peptidase S1C Clocl_1890 IPR001478 PDZ domain Clocl_1890 IPR036034 PDZ superfamily Clocl_1890 IPR011782 Peptidase S1C, Do Clocl_1890 IPR009003 Peptidase S1, PA clan Clocl_1891 IPR007563 Protein of unknown function DUF554 Clocl_1892 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Clocl_1892 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Clocl_1892 IPR018176 Tryptophanase, conserved site Clocl_1892 IPR011166 Beta-eliminating lyase family Clocl_1892 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase Clocl_1892 IPR013441 Tyrosine phenol-lyase Clocl_1892 IPR015424 Pyridoxal phosphate-dependent transferase Clocl_1893 IPR001087 GDSL lipase/esterase Clocl_1893 IPR036514 SGNH hydrolase superfamily Clocl_1893 IPR029058 Alpha/Beta hydrolase fold Clocl_1893 IPR002105 Dockerin type I repeat Clocl_1893 IPR016134 Dockerin domain Clocl_1893 IPR036439 Dockerin domain superfamily Clocl_1898 IPR006059 Bacterial extracellular solute-binding protein Clocl_1898 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein Clocl_1899 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Clocl_1899 IPR035906 MetI-like superfamily Clocl_1900 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Clocl_1900 IPR035906 MetI-like superfamily Clocl_1901 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_1901 IPR013611 Transport-associated OB, type 2 Clocl_1901 IPR008995 Molybdate/tungstate binding, C-terminal Clocl_1901 IPR017871 ABC transporter, conserved site Clocl_1901 IPR003439 ABC transporter-like Clocl_1901 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA Clocl_1901 IPR003593 AAA+ ATPase domain Clocl_1901 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit Clocl_1903 IPR012337 Ribonuclease H-like superfamily Clocl_1903 IPR004013 PHP domain Clocl_1903 IPR003141 Polymerase/histidinol phosphatase, N-terminal Clocl_1903 IPR024754 DNA polymerase III polC-like, N-terminal domain II Clocl_1903 IPR036397 Ribonuclease H superfamily Clocl_1903 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain Clocl_1903 IPR013520 Exonuclease, RNase T/DNA polymerase III Clocl_1903 IPR012340 Nucleic acid-binding, OB-fold Clocl_1903 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type Clocl_1903 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type Clocl_1903 IPR040982 DNA polymerase III alpha subunit finger domain Clocl_1903 IPR029460 DNA polymerase, helix-hairpin-helix motif Clocl_1903 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain Clocl_1908 IPR002104 Integrase, catalytic domain Clocl_1908 IPR011010 DNA breaking-rejoining enzyme, catalytic core Clocl_1908 IPR013762 Integrase-like, catalytic domain superfamily Clocl_1908 IPR010998 Integrase/recombinase, N-terminal Clocl_1908 IPR004107 Integrase, SAM-like, N-terminal Clocl_1912 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_1912 IPR006935 Helicase/UvrB, N-terminal Clocl_1912 IPR014883 VRR-NUC domain Clocl_1913 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class Clocl_1913 IPR002941 DNA methylase N-4/N-6 Clocl_1913 IPR002052 DNA methylase, N-6 adenine-specific, conserved site Clocl_1913 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clocl_1913 IPR041405 Type III R-M EcoP15I, C-terminal Clocl_1915 IPR038718 SNF2-like, N-terminal domain superfamily Clocl_1915 IPR001650 Helicase, C-terminal Clocl_1915 IPR000330 SNF2-related, N-terminal domain Clocl_1915 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_1915 IPR014001 Helicase superfamily 1/2, ATP-binding domain Clocl_1917 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily Clocl_1917 IPR006118 Recombinase, conserved site Clocl_1917 IPR006120 Resolvase, HTH domain Clocl_1917 IPR006119 Resolvase, N-terminal catalytic domain Clocl_1917 IPR009057 Homeobox-like domain superfamily Clocl_1926 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit Clocl_1928 IPR012337 Ribonuclease H-like superfamily Clocl_1928 IPR036397 Ribonuclease H superfamily Clocl_1928 IPR040982 DNA polymerase III alpha subunit finger domain Clocl_1928 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain Clocl_1928 IPR004013 PHP domain Clocl_1928 IPR013520 Exonuclease, RNase T/DNA polymerase III Clocl_1928 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type Clocl_1928 IPR029460 DNA polymerase, helix-hairpin-helix motif Clocl_1928 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain Clocl_1928 IPR003141 Polymerase/histidinol phosphatase, N-terminal Clocl_1928 IPR024754 DNA polymerase III polC-like, N-terminal domain II Clocl_1928 IPR028112 DNA polymerase III polC-type, N-terminal domain I Clocl_1929 IPR013785 Aldolase-type TIM barrel Clocl_1929 IPR007197 Radical SAM Clocl_1929 IPR001989 Radical-activating enzyme, conserved site Clocl_1929 IPR034457 Organic radical-activating enzymes Clocl_1929 IPR012839 Organic radical enzyme activase Clocl_1929 IPR034465 Pyruvate formate-lyase activase Clocl_1929 IPR012838 Pyruvate formate-lyase 1 activating enzyme Clocl_1930 IPR004184 Pyruvate formate lyase domain Clocl_1930 IPR001150 Glycine radical domain Clocl_1930 IPR005949 Formate acetyltransferase Clocl_1930 IPR019777 Formate C-acetyltransferase glycine radical, conserved site Clocl_1936 IPR000943 RNA polymerase sigma-70 Clocl_1936 IPR014284 RNA polymerase sigma-70 like domain Clocl_1936 IPR007630 RNA polymerase sigma-70 region 4 Clocl_1936 IPR007627 RNA polymerase sigma-70 region 2 Clocl_1936 IPR013324 RNA polymerase sigma factor, region 3/4-like Clocl_1936 IPR007624 RNA polymerase sigma-70 region 3 Clocl_1936 IPR012845 RNA polymerase sigma factor, FliA/WhiG Clocl_1936 IPR013325 RNA polymerase sigma factor, region 2 Clocl_1938 IPR038592 CheD-like superfamily Clocl_1938 IPR005659 Chemoreceptor glutamine deamidase CheD Clocl_1938 IPR011324 Cytotoxic necrotizing factor-like, catalytic Clocl_1939 IPR028976 CheC-like superfamily Clocl_1939 IPR007597 CheC-like protein Clocl_1940 IPR036061 CheW-like domain superfamily Clocl_1940 IPR039315 Chemotaxis protein CheW Clocl_1940 IPR002545 CheW-like domain Clocl_1941 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Clocl_1941 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Clocl_1941 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clocl_1941 IPR037052 Chemotaxis protein CheA, P2 response regulator-binding domain superfamily Clocl_1941 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Clocl_1941 IPR036641 HPT domain superfamily Clocl_1941 IPR002545 CheW-like domain Clocl_1941 IPR036061 CheW-like domain superfamily Clocl_1941 IPR004105 Histidine kinase CheA-like, homodimeric domain Clocl_1941 IPR003594 Histidine kinase/HSP90-like ATPase Clocl_1941 IPR010808 Chemotaxis protein CheA, P2 response regulator-binding Clocl_1941 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily Clocl_1941 IPR005467 Histidine kinase domain Clocl_1941 IPR035891 CheY-binding domain of CheA Clocl_1942 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type Clocl_1942 IPR035909 Methylesterase CheB, C-terminal Clocl_1942 IPR011006 CheY-like superfamily Clocl_1942 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase Clocl_1942 IPR001789 Signal transduction response regulator, receiver domain Clocl_1944 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_1944 IPR025501 ATP binding protein MinD Clocl_1944 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 Clocl_1945 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain Clocl_1945 IPR020006 Flagellar biosynthesis protein FlhF Clocl_1945 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_1946 IPR001712 Type III secretion system FHIPEP Clocl_1946 IPR042193 FHIPEP, domain 3 Clocl_1946 IPR006301 Flagellar biosynthesis protein FlhA Clocl_1946 IPR025505 FHIPEP conserved site Clocl_1946 IPR042196 FHIPEP, domain 4 Clocl_1946 IPR042194 FHIPEP, domain 1 Clocl_1947 IPR006136 Flagellar biosynthetic protein FlhB Clocl_1947 IPR006135 Type III secretion system substrate exporter Clocl_1947 IPR029025 Type III secretion system substrate exporter, C-terminal Clocl_1948 IPR006303 Flagellar biosynthesis protein FliR Clocl_1948 IPR002010 Type III secretion system inner membrane R protein Clocl_1949 IPR006305 Flagellar biosynthesis protein FliQ Clocl_1949 IPR002191 Bacterial export protein family 3 Clocl_1950 IPR005837 Flagellar transport protein FliP Clocl_1950 IPR005838 Type III secretion system inner membrane P protein Clocl_1952 IPR011006 CheY-like superfamily Clocl_1952 IPR001789 Signal transduction response regulator, receiver domain Clocl_1953 IPR036429 SpoA-like superfamily Clocl_1953 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb Clocl_1953 IPR028976 CheC-like superfamily Clocl_1953 IPR001543 Surface presentation of antigen (SpoA) Clocl_1953 IPR007597 CheC-like protein Clocl_1953 IPR012826 Flagellar motor switch FliN Clocl_1954 IPR028976 CheC-like superfamily Clocl_1954 IPR001689 Flagellar motor switch protein FliM Clocl_1954 IPR036429 SpoA-like superfamily Clocl_1954 IPR001543 Surface presentation of antigen (SpoA) Clocl_1957 IPR019776 Flagellar basal body rod protein, conserved site Clocl_1957 IPR001444 Flagellar basal body rod protein, N-terminal Clocl_1957 IPR037058 Flagellar hook protein FlgE superfamily Clocl_1957 IPR011491 Flagellar hook protein FlgE Clocl_1957 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Clocl_1957 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like Clocl_1957 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Clocl_1959 IPR005648 Flagellar hook capping protein Clocl_1961 IPR003346 Transposase, IS116/IS110/IS902 Clocl_1961 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal Clocl_1964 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain Clocl_1964 IPR032463 ATPase, type III secretion system, FliI Clocl_1964 IPR005714 ATPase, type III secretion system, FliI/YscN Clocl_1964 IPR022425 Flagellar export ATPase FliI, clade 2 Clocl_1964 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_1964 IPR000225 Armadillo Clocl_1964 IPR040627 T3SS EscN ATPase, C-terminal Clocl_1964 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain Clocl_1964 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site Clocl_1964 IPR003593 AAA+ ATPase domain Clocl_1965 IPR022524 Flagellar assembly FliH, Bacilli Clocl_1965 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE Clocl_1966 IPR032779 Flagellar motor switch protein FliG, middle domain Clocl_1966 IPR023087 Flagellar motor switch protein FliG, C-terminal Clocl_1966 IPR000090 Flagellar motor switch protein FliG Clocl_1966 IPR011002 Flagellar motor switch protein FliG, alpha-helical Clocl_1966 IPR028263 Flagellar motor switch protein FliG, N-terminal domain Clocl_1968 IPR001624 Flagellar hook-basal body complex protein FliE Clocl_1969 IPR006299 Flagellar basal-body rod protein FlgC Clocl_1969 IPR001444 Flagellar basal body rod protein, N-terminal Clocl_1969 IPR019776 Flagellar basal body rod protein, conserved site Clocl_1969 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Clocl_1970 IPR001444 Flagellar basal body rod protein, N-terminal Clocl_1970 IPR019776 Flagellar basal body rod protein, conserved site Clocl_1970 IPR006300 Flagellar basal-body rod protein FlgB Clocl_1971 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO Clocl_1971 IPR036188 FAD/NAD(P)-binding domain superfamily Clocl_1971 IPR020595 MnmG-related, conserved site Clocl_1971 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related Clocl_1972 IPR006171 TOPRIM domain Clocl_1972 IPR028612 DNA topoisomerase I, type IA Clocl_1972 IPR003602 DNA topoisomerase, type IA, DNA-binding domain Clocl_1972 IPR034149 DNA topoisomerase 1, TOPRIM domain Clocl_1972 IPR023405 DNA topoisomerase, type IA, core domain Clocl_1972 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 Clocl_1972 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 Clocl_1972 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 Clocl_1972 IPR013497 DNA topoisomerase, type IA, central Clocl_1972 IPR023406 DNA topoisomerase, type IA, active site Clocl_1972 IPR013498 DNA topoisomerase, type IA, zn finger Clocl_1972 IPR005733 DNA topoisomerase I, bacterial-type Clocl_1972 IPR003601 DNA topoisomerase, type IA, domain 2 Clocl_1972 IPR000380 DNA topoisomerase, type IA Clocl_1973 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_1973 IPR041614 DprA, winged helix domain Clocl_1973 IPR010994 RuvA domain 2-like Clocl_1973 IPR003488 DNA recombination-mediator protein A Clocl_1974 IPR000523 Magnesium chelatase ChlI domain Clocl_1974 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Clocl_1974 IPR025158 Mg chelatase-related protein, C-terminal domain Clocl_1974 IPR004482 Mg chelatase-related protein Clocl_1974 IPR001208 MCM domain Clocl_1974 IPR003593 AAA+ ATPase domain Clocl_1974 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_1974 IPR020568 Ribosomal protein S5 domain 2-type fold Clocl_1975 IPR036966 Carbohydrate-binding module 3 superfamily Clocl_1975 IPR001956 Carbohydrate-binding module 3 Clocl_1975 IPR001701 Glycoside hydrolase family 9 Clocl_1975 IPR033126 Glycosyl hydrolases family 9, Asp/Glu active sites Clocl_1975 IPR018221 Glycoside hydrolase family 9, His active site Clocl_1975 IPR013783 Immunoglobulin-like fold Clocl_1975 IPR014756 Immunoglobulin E-set Clocl_1975 IPR008928 Six-hairpin glycosidase superfamily Clocl_1975 IPR012341 Six-hairpin glycosidase-like superfamily Clocl_1975 IPR005102 Carbohydrate binding X2 domain Clocl_1975 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clocl_1976 IPR016193 Cytidine deaminase-like Clocl_1976 IPR006262 Cytidine deaminase, homotetrameric Clocl_1976 IPR002125 Cytidine and deoxycytidylate deaminase domain Clocl_1976 IPR016192 APOBEC/CMP deaminase, zinc-binding Clocl_1978 IPR001119 S-layer homology domain Clocl_1978 IPR002102 Cellulosome anchoring protein, cohesin domain Clocl_1978 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clocl_1979 IPR001031 Thioesterase Clocl_1979 IPR020802 Polyketide synthase, thioesterase domain Clocl_1979 IPR012223 Thioesterase type II, NRPS/PKS/S-FAS Clocl_1979 IPR029058 Alpha/Beta hydrolase fold Clocl_1981 IPR017853 Glycoside hydrolase superfamily Clocl_1981 IPR018087 Glycoside hydrolase, family 5, conserved site Clocl_1981 IPR018247 EF-Hand 1, calcium-binding site Clocl_1981 IPR036439 Dockerin domain superfamily Clocl_1981 IPR001547 Glycoside hydrolase, family 5 Clocl_1981 IPR002105 Dockerin type I repeat Clocl_1981 IPR016134 Dockerin domain Clocl_1985 IPR005170 Transporter-associated domain Clocl_1985 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily Clocl_1985 IPR006037 Regulator of K+ conductance, C-terminal Clocl_1985 IPR006153 Cation/H+ exchanger Clocl_1985 IPR036318 FAD-binding, type PCMH-like superfamily Clocl_1985 IPR023729 K(+)/H(+) antiporter NhaP2 Clocl_1985 IPR016169 FAD-binding, type PCMH, subdomain 2 Clocl_1985 IPR038770 Sodium/solute symporter superfamily Clocl_1985 IPR030151 K(+)/H(+) antiporter NhaP Clocl_1989 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clocl_1989 IPR009051 Alpha-helical ferredoxin Clocl_1989 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clocl_1989 IPR013542 Domain of unknown function DUF1730 Clocl_1989 IPR004453 Epoxyqueuosine reductase QueG Clocl_1990 IPR029033 Histidine phosphatase superfamily Clocl_1990 IPR013078 Histidine phosphatase superfamily, clade-1 Clocl_1990 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site Clocl_1990 IPR005952 Phosphoglycerate mutase 1 Clocl_1998 IPR013483 Molybdenum cofactor biosynthesis protein A Clocl_1998 IPR006638 Elp3/MiaB/NifB Clocl_1998 IPR013785 Aldolase-type TIM barrel Clocl_1998 IPR007197 Radical SAM Clocl_1998 IPR010505 Molybdenum cofactor synthesis C-terminal Clocl_1998 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site Clocl_2004 IPR036589 Homocysteine-binding domain superfamily Clocl_2004 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Clocl_2004 IPR006158 Cobalamin (vitamin B12)-binding domain Clocl_2004 IPR036724 Cobalamin-binding domain superfamily Clocl_2004 IPR011005 Dihydropteroate synthase-like Clocl_2004 IPR003726 Homocysteine-binding domain Clocl_2004 IPR033706 Methionine synthase, B12-binding domain Clocl_2004 IPR011822 Cobalamin-dependent methionine synthase Clocl_2004 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily Clocl_2004 IPR004223 Vitamin B12-dependent methionine synthase, activation domain Clocl_2004 IPR000489 Pterin-binding domain Clocl_2004 IPR036594 Methionine synthase domain Clocl_2010 IPR035994 Nucleoside phosphorylase superfamily Clocl_2010 IPR000845 Nucleoside phosphorylase domain Clocl_2010 IPR010044 Methylthioadenosine phosphorylase (MTAP) Clocl_2011 IPR037171 NagB/RpiA transferase-like Clocl_2011 IPR027363 Methylthioribose-1-phosphate isomerase, N-terminal Clocl_2011 IPR011559 Initiation factor 2B alpha/beta/delta Clocl_2011 IPR005251 Methylthioribose-1-phosphate isomerase Clocl_2011 IPR000649 Initiation factor 2B-related Clocl_2012 IPR030963 3-dehydroquinate synthase family Clocl_2012 IPR030960 3-dehydroquinate synthase domain Clocl_2012 IPR016037 3-dehydroquinate synthase AroB Clocl_2014 IPR002942 RNA-binding S4 domain Clocl_2014 IPR036986 RNA-binding S4 domain superfamily Clocl_2014 IPR040591 YlmH, putative RNA-binding domain Clocl_2014 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily Clocl_2016 IPR023052 Cell division protein SepF Clocl_2016 IPR007561 Cell division protein SepF/SepF-related Clocl_2016 IPR038594 SepF-like superfamily Clocl_2017 IPR001608 Alanine racemase, N-terminal Clocl_2017 IPR029066 PLP-binding barrel Clocl_2017 IPR011078 Pyridoxal phosphate homeostasis protein Clocl_2019 IPR009651 Putative methionine gamma-lyase Clocl_2019 IPR015424 Pyridoxal phosphate-dependent transferase Clocl_2019 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Clocl_2020 IPR013783 Immunoglobulin-like fold Clocl_2020 IPR014756 Immunoglobulin E-set Clocl_2020 IPR006047 Glycosyl hydrolase, family 13, catalytic domain Clocl_2020 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain Clocl_2020 IPR013780 Glycosyl hydrolase, all-beta Clocl_2020 IPR017853 Glycoside hydrolase superfamily Clocl_2021 IPR006225 Pseudouridine synthase, RluC/RluD Clocl_2021 IPR020103 Pseudouridine synthase, catalytic domain superfamily Clocl_2021 IPR006145 Pseudouridine synthase, RsuA/RluA Clocl_2021 IPR002942 RNA-binding S4 domain Clocl_2021 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site Clocl_2026 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_2026 IPR001789 Signal transduction response regulator, receiver domain Clocl_2026 IPR001867 OmpR/PhoB-type DNA-binding domain Clocl_2026 IPR039420 Transcriptional regulatory protein WalR-like Clocl_2026 IPR011006 CheY-like superfamily Clocl_2027 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Clocl_2027 IPR011006 CheY-like superfamily Clocl_2027 IPR003660 HAMP domain Clocl_2027 IPR005467 Histidine kinase domain Clocl_2027 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Clocl_2027 IPR003594 Histidine kinase/HSP90-like ATPase Clocl_2027 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Clocl_2027 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Clocl_2027 IPR036641 HPT domain superfamily Clocl_2027 IPR019247 Histidine kinase BarA, N-terminal Clocl_2027 IPR001789 Signal transduction response regulator, receiver domain Clocl_2027 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clocl_2028 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type Clocl_2028 IPR035909 Methylesterase CheB, C-terminal Clocl_2028 IPR011006 CheY-like superfamily Clocl_2028 IPR001789 Signal transduction response regulator, receiver domain Clocl_2028 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase Clocl_2029 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal Clocl_2029 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clocl_2029 IPR026024 Chemotaxis protein methyltransferase CheR Clocl_2029 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal Clocl_2029 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily Clocl_2029 IPR000780 MCP methyltransferase, CheR-type Clocl_2030 IPR039315 Chemotaxis protein CheW Clocl_2030 IPR036061 CheW-like domain superfamily Clocl_2030 IPR002545 CheW-like domain Clocl_2031 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Clocl_2031 IPR005467 Histidine kinase domain Clocl_2031 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clocl_2031 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Clocl_2031 IPR003594 Histidine kinase/HSP90-like ATPase Clocl_2031 IPR035891 CheY-binding domain of CheA Clocl_2031 IPR002545 CheW-like domain Clocl_2031 IPR036061 CheW-like domain superfamily Clocl_2031 IPR010808 Chemotaxis protein CheA, P2 response regulator-binding Clocl_2031 IPR037052 Chemotaxis protein CheA, P2 response regulator-binding domain superfamily Clocl_2031 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily Clocl_2031 IPR004105 Histidine kinase CheA-like, homodimeric domain Clocl_2031 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Clocl_2031 IPR036641 HPT domain superfamily Clocl_2032 IPR001789 Signal transduction response regulator, receiver domain Clocl_2032 IPR011006 CheY-like superfamily Clocl_2033 IPR016032 Signal transduction response regulator, C-terminal effector Clocl_2033 IPR001789 Signal transduction response regulator, receiver domain Clocl_2033 IPR014879 Sporulation initiation factor Spo0A, C-terminal Clocl_2033 IPR012052 Sporulation transcription factor Spo0A Clocl_2033 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_2033 IPR011006 CheY-like superfamily Clocl_2034 IPR008763 Peptidase S55, SpoIVB Clocl_2034 IPR009003 Peptidase S1, PA clan Clocl_2034 IPR014219 Peptidase S55, sporulation stage IV, protein B Clocl_2034 IPR036034 PDZ superfamily Clocl_2034 IPR001478 PDZ domain Clocl_2034 IPR041489 PDZ domain 6 Clocl_2035 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_2035 IPR003395 RecF/RecN/SMC, N-terminal Clocl_2035 IPR004604 DNA recombination/repair protein RecN Clocl_2036 IPR020900 Arginine repressor, DNA-binding domain Clocl_2036 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_2036 IPR036390 Winged helix DNA-binding domain superfamily Clocl_2036 IPR001669 Arginine repressor Clocl_2036 IPR020899 Arginine repressor, C-terminal Clocl_2036 IPR036251 Arginine repressor, C-terminal domain superfamily Clocl_2037 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal Clocl_2037 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal Clocl_2037 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily Clocl_2037 IPR002504 NAD kinase Clocl_2040 IPR001764 Glycoside hydrolase, family 3, N-terminal Clocl_2040 IPR013783 Immunoglobulin-like fold Clocl_2040 IPR017853 Glycoside hydrolase superfamily Clocl_2040 IPR026891 Fibronectin type III-like domain Clocl_2040 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily Clocl_2040 IPR002772 Glycoside hydrolase family 3 C-terminal domain Clocl_2040 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily Clocl_2042 IPR015956 Penicillin-binding protein, C-terminal domain superfamily Clocl_2042 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal Clocl_2042 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily Clocl_2042 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal Clocl_2042 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A Clocl_2042 IPR012338 Beta-lactamase/transpeptidase-like Clocl_2044 IPR024449 Anti-sigma factor RsgI, N-terminal Clocl_2045 IPR013325 RNA polymerase sigma factor, region 2 Clocl_2045 IPR007627 RNA polymerase sigma-70 region 2 Clocl_2045 IPR014244 RNA polymerase sigma-I type Clocl_2050 IPR003593 AAA+ ATPase domain Clocl_2050 IPR003439 ABC transporter-like Clocl_2050 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_2050 IPR017871 ABC transporter, conserved site Clocl_2051 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Clocl_2051 IPR003660 HAMP domain Clocl_2051 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Clocl_2051 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Clocl_2051 IPR005467 Histidine kinase domain Clocl_2051 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clocl_2051 IPR003594 Histidine kinase/HSP90-like ATPase Clocl_2052 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_2052 IPR011006 CheY-like superfamily Clocl_2052 IPR001867 OmpR/PhoB-type DNA-binding domain Clocl_2052 IPR039420 Transcriptional regulatory protein WalR-like Clocl_2052 IPR016032 Signal transduction response regulator, C-terminal effector Clocl_2052 IPR001789 Signal transduction response regulator, receiver domain Clocl_2054 IPR011006 CheY-like superfamily Clocl_2054 IPR001867 OmpR/PhoB-type DNA-binding domain Clocl_2054 IPR016032 Signal transduction response regulator, C-terminal effector Clocl_2054 IPR001789 Signal transduction response regulator, receiver domain Clocl_2054 IPR039420 Transcriptional regulatory protein WalR-like Clocl_2054 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_2055 IPR013767 PAS fold Clocl_2055 IPR000014 PAS domain Clocl_2055 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Clocl_2055 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Clocl_2055 IPR005467 Histidine kinase domain Clocl_2055 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clocl_2055 IPR003594 Histidine kinase/HSP90-like ATPase Clocl_2055 IPR003660 HAMP domain Clocl_2055 IPR029151 Periplasmic sensor-like domain superfamily Clocl_2055 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Clocl_2055 IPR035965 PAS domain superfamily Clocl_2055 IPR000700 PAS-associated, C-terminal Clocl_2057 IPR004538 Haemolysin A /rRNA methyltransferase TlyA Clocl_2057 IPR002942 RNA-binding S4 domain Clocl_2057 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clocl_2057 IPR002877 Ribosomal RNA methyltransferase FtsJ domain Clocl_2057 IPR036986 RNA-binding S4 domain superfamily Clocl_2058 IPR029061 Thiamin diphosphate-binding fold Clocl_2058 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II Clocl_2058 IPR005475 Transketolase-like, pyrimidine-binding domain Clocl_2058 IPR020826 Transketolase binding site Clocl_2058 IPR033248 Transketolase, C-terminal domain Clocl_2058 IPR005474 Transketolase, N-terminal Clocl_2058 IPR005477 Deoxyxylulose-5-phosphate synthase Clocl_2061 IPR008949 Isoprenoid synthase domain superfamily Clocl_2061 IPR033749 Polyprenyl synthetase, conserved site Clocl_2061 IPR000092 Polyprenyl synthetase Clocl_2062 IPR037004 Exonuclease VII, small subunit superfamily Clocl_2062 IPR003761 Exonuclease VII, small subunit Clocl_2063 IPR016102 Succinyl-CoA synthetase-like Clocl_2063 IPR025824 OB-fold nucleic acid binding domain Clocl_2063 IPR020579 Exonuclease VII, large subunit, C-terminal Clocl_2063 IPR003753 Exonuclease VII, large subunit Clocl_2064 IPR006027 NusB/RsmB/TIM44 Clocl_2064 IPR011605 NusB antitermination factor Clocl_2064 IPR035926 NusB-like superfamily Clocl_2067 IPR005531 Alkaline shock protein Asp23 Clocl_2069 IPR014195 Sporulation stage III, protein AG Clocl_2071 IPR014194 Sporulation stage III, protein AE Clocl_2072 IPR025664 Stage III sporulation protein AC/AD family Clocl_2072 IPR014211 Stage III sporulation protein AD Clocl_2073 IPR025664 Stage III sporulation protein AC/AD family Clocl_2073 IPR009570 Stage III sporulation protein AC Clocl_2075 IPR014217 Sporulation stage III, protein AA Clocl_2075 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_2075 IPR003593 AAA+ ATPase domain Clocl_2076 IPR006043 Xanthine/uracil/vitamin C permease Clocl_2076 IPR006042 Xanthine/uracil permease Clocl_2076 IPR029935 Uracil permease Clocl_2077 IPR013325 RNA polymerase sigma factor, region 2 Clocl_2077 IPR007627 RNA polymerase sigma-70 region 2 Clocl_2077 IPR014244 RNA polymerase sigma-I type Clocl_2077 IPR018247 EF-Hand 1, calcium-binding site Clocl_2077 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_2079 IPR003607 HD/PDEase domain Clocl_2079 IPR006674 HD domain Clocl_2079 IPR037522 HD-GYP domain Clocl_2079 IPR001789 Signal transduction response regulator, receiver domain Clocl_2079 IPR011006 CheY-like superfamily Clocl_2080 IPR032094 Meso-diaminopimelate D-dehydrogenase, C-terminal Clocl_2080 IPR010190 Diaminopimelate dehydrogenase, Ddh Clocl_2080 IPR036291 NAD(P)-binding domain superfamily Clocl_2081 IPR036390 Winged helix DNA-binding domain superfamily Clocl_2081 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_2081 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_2081 IPR018541 FtsK gamma domain Clocl_2081 IPR002543 FtsK domain Clocl_2081 IPR041027 FtsK alpha domain Clocl_2081 IPR025199 DNA translocase FtsK, 4TM region Clocl_2081 IPR003593 AAA+ ATPase domain Clocl_2083 IPR013319 Glycoside hydrolase family 11/12 Clocl_2083 IPR033119 Glycoside hydrolase family 11, active site 2 Clocl_2083 IPR018208 Glycoside hydrolase family 11, active site 1 Clocl_2083 IPR008979 Galactose-binding-like domain superfamily Clocl_2083 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Clocl_2083 IPR005084 Carbohydrate binding module family 6 Clocl_2083 IPR033123 Glycosyl hydrolases family 11 (GH11) domain Clocl_2083 IPR006584 Cellulose binding, type IV Clocl_2083 IPR001137 Glycoside hydrolase family 11 Clocl_2085 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Clocl_2085 IPR035906 MetI-like superfamily Clocl_2086 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Clocl_2086 IPR035906 MetI-like superfamily Clocl_2089 IPR003593 AAA+ ATPase domain Clocl_2089 IPR003439 ABC transporter-like Clocl_2089 IPR017871 ABC transporter, conserved site Clocl_2089 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_2089 IPR036640 ABC transporter type 1, transmembrane domain superfamily Clocl_2089 IPR011527 ABC transporter type 1, transmembrane domain Clocl_2095 IPR002528 Multi antimicrobial extrusion protein Clocl_2097 IPR013830 SGNH hydrolase-type esterase domain Clocl_2097 IPR036514 SGNH hydrolase superfamily Clocl_2097 IPR036439 Dockerin domain superfamily Clocl_2097 IPR016134 Dockerin domain Clocl_2097 IPR002105 Dockerin type I repeat Clocl_2098 IPR007934 Alpha-L-arabinofuranosidase B, arabinose-binding domain Clocl_2098 IPR036195 Alpha-L-arabinofuranosidase B, arabinose-binding domain superfamily Clocl_2098 IPR024449 Anti-sigma factor RsgI, N-terminal Clocl_2099 IPR014244 RNA polymerase sigma-I type Clocl_2099 IPR007627 RNA polymerase sigma-70 region 2 Clocl_2099 IPR013325 RNA polymerase sigma factor, region 2 Clocl_2100 IPR030395 Glycerophosphodiester phosphodiesterase domain Clocl_2100 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily Clocl_2103 IPR003346 Transposase, IS116/IS110/IS902 Clocl_2103 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal Clocl_2108 IPR002102 Cellulosome anchoring protein, cohesin domain Clocl_2108 IPR001119 S-layer homology domain Clocl_2108 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clocl_2110 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Clocl_2110 IPR017221 GTP cyclohydrolase 1 type 2//Nif3, bacteria Clocl_2110 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily Clocl_2110 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 Clocl_2118 IPR014284 RNA polymerase sigma-70 like domain Clocl_2118 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_2118 IPR028630 RNA polymerase sigma factor RpoD Clocl_2118 IPR012760 RNA polymerase sigma factor RpoD, C-terminal Clocl_2118 IPR013325 RNA polymerase sigma factor, region 2 Clocl_2118 IPR013324 RNA polymerase sigma factor, region 3/4-like Clocl_2118 IPR007127 RNA polymerase sigma factor 70, region 1.1 Clocl_2118 IPR007630 RNA polymerase sigma-70 region 4 Clocl_2118 IPR007624 RNA polymerase sigma-70 region 3 Clocl_2118 IPR007627 RNA polymerase sigma-70 region 2 Clocl_2118 IPR009042 RNA polymerase sigma-70 region 1.2 Clocl_2118 IPR000943 RNA polymerase sigma-70 Clocl_2118 IPR042189 Sigma-70 factor, region 1.1 superfamily Clocl_2119 IPR006171 TOPRIM domain Clocl_2119 IPR002694 Zinc finger, CHC2-type Clocl_2119 IPR034151 Bacterial DnaG primase, TOPRIM domain Clocl_2119 IPR036977 DNA Primase, CHC2-type zinc finger Clocl_2119 IPR006295 DNA primase, DnaG Clocl_2119 IPR019475 DNA primase, DnaB-helicase binding domain Clocl_2119 IPR030846 DNA primase DnaG, bacteria Clocl_2119 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily Clocl_2119 IPR013264 DNA primase, catalytic core, N-terminal Clocl_2119 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal Clocl_2120 IPR006261 dNTP triphosphohydrolase Clocl_2120 IPR023023 dNTP triphosphohydrolase, type 2 Clocl_2120 IPR003607 HD/PDEase domain Clocl_2120 IPR006674 HD domain Clocl_2120 IPR026875 Phosphohydrolase-associated domain Clocl_2122 IPR001789 Signal transduction response regulator, receiver domain Clocl_2122 IPR003607 HD/PDEase domain Clocl_2122 IPR011006 CheY-like superfamily Clocl_2122 IPR037522 HD-GYP domain Clocl_2124 IPR003190 Aspartate decarboxylase Clocl_2124 IPR009010 Aspartate decarboxylase-like domain superfamily Clocl_2125 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain Clocl_2125 IPR003721 Pantoate-beta-alanine ligase Clocl_2125 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clocl_2126 IPR003700 Ketopantoate hydroxymethyltransferase Clocl_2126 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily Clocl_2126 IPR040442 Pyruvate kinase-like domain superfamily Clocl_2127 IPR005665 Protein-export membrane protein SecF, bacterial Clocl_2127 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Clocl_2127 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site Clocl_2127 IPR005791 Protein translocase subunit SecD Clocl_2127 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial Clocl_2128 IPR005791 Protein translocase subunit SecD Clocl_2128 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial Clocl_2128 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Clocl_2128 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site Clocl_2129 IPR006674 HD domain Clocl_2129 IPR004088 K Homology domain, type 1 Clocl_2129 IPR004087 K Homology domain Clocl_2129 IPR006675 HDIG domain Clocl_2129 IPR003607 HD/PDEase domain Clocl_2129 IPR017705 Ribonuclease Y Clocl_2129 IPR022711 Ribonuclease Y, N-terminal Clocl_2129 IPR036612 K Homology domain, type 1 superfamily Clocl_2130 IPR007197 Radical SAM Clocl_2130 IPR013785 Aldolase-type TIM barrel Clocl_2130 IPR006638 Elp3/MiaB/NifB Clocl_2130 IPR040072 Methyltransferase (Class A) Clocl_2130 IPR027492 Dual-specificity RNA methyltransferase RlmN Clocl_2130 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr Clocl_2132 IPR036986 RNA-binding S4 domain superfamily Clocl_2132 IPR002942 RNA-binding S4 domain Clocl_2132 IPR006145 Pseudouridine synthase, RsuA/RluA Clocl_2132 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site Clocl_2132 IPR006225 Pseudouridine synthase, RluC/RluD Clocl_2132 IPR020103 Pseudouridine synthase, catalytic domain superfamily Clocl_2133 IPR001872 Peptidase A8, signal peptidase II Clocl_2134 IPR006261 dNTP triphosphohydrolase Clocl_2134 IPR003607 HD/PDEase domain Clocl_2134 IPR006674 HD domain Clocl_2134 IPR026875 Phosphohydrolase-associated domain Clocl_2134 IPR023023 dNTP triphosphohydrolase, type 2 Clocl_2135 IPR035906 MetI-like superfamily Clocl_2135 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Clocl_2136 IPR005889 Nitrate transport permease Clocl_2136 IPR035906 MetI-like superfamily Clocl_2136 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Clocl_2138 IPR013580 Proto-chlorophyllide/chlorophyllide reductase, C-terminal Clocl_2138 IPR042298 Proto-chlorophyllide reductase, C-terminal Clocl_2138 IPR005969 Light-independent protochlorophyllide reductase, B subunit Clocl_2138 IPR016209 Protochlorophyllide reductase, ChlB, light independent Clocl_2138 IPR000510 Nitrogenase/oxidoreductase, component 1 Clocl_2139 IPR000318 Nitrogenase component 1, conserved site Clocl_2139 IPR005972 Nitrogenase molybdenum-iron protein alpha chain Clocl_2139 IPR000510 Nitrogenase/oxidoreductase, component 1 Clocl_2139 IPR010143 Nitrogenase component 1, alpha chain Clocl_2140 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_2140 IPR005977 Nitrogenase iron protein NifH Clocl_2140 IPR000392 NifH/frxC family Clocl_2140 IPR030655 NifH/chlL conserved site Clocl_2143 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Clocl_2143 IPR035906 MetI-like superfamily Clocl_2148 IPR030678 Peptide/nickel binding protein, MppA-type Clocl_2148 IPR039424 Solute-binding protein family 5 Clocl_2148 IPR023765 Solute-binding protein family 5, conserved site Clocl_2148 IPR000914 Solute-binding protein family 5 domain Clocl_2149 IPR038371 Multi-copper polyphenol oxidoreductase superfamily Clocl_2149 IPR003730 Multi-copper polyphenol oxidoreductase Clocl_2149 IPR011324 Cytotoxic necrotizing factor-like, catalytic Clocl_2154 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clocl_2154 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily Clocl_2154 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site Clocl_2154 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily Clocl_2154 IPR022861 Glutamine-tRNA ligase, bacterial Clocl_2154 IPR004514 Glutamine-tRNA synthetase Clocl_2154 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Clocl_2154 IPR000924 Glutamyl/glutaminyl-tRNA synthetase Clocl_2154 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain Clocl_2154 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain Clocl_2156 IPR001093 IMP dehydrogenase/GMP reductase Clocl_2156 IPR013785 Aldolase-type TIM barrel Clocl_2156 IPR000644 CBS domain Clocl_2156 IPR015875 IMP dehydrogenase / GMP reductase, conserved site Clocl_2156 IPR005990 Inosine-5'-monophosphate dehydrogenase Clocl_2157 IPR036291 NAD(P)-binding domain superfamily Clocl_2157 IPR020904 Short-chain dehydrogenase/reductase, conserved site Clocl_2157 IPR002347 Short-chain dehydrogenase/reductase SDR Clocl_2159 IPR038010 YhfW, C-terminal Rieske domain Clocl_2159 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily Clocl_2159 IPR017941 Rieske [2Fe-2S] iron-sulphur domain Clocl_2159 IPR036188 FAD/NAD(P)-binding domain superfamily Clocl_2159 IPR006076 FAD dependent oxidoreductase Clocl_2159 IPR005805 Rieske iron-sulphur protein, C-terminal Clocl_2160 IPR003607 HD/PDEase domain Clocl_2160 IPR006674 HD domain Clocl_2160 IPR002646 Poly A polymerase, head domain Clocl_2160 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Clocl_2160 IPR006675 HDIG domain Clocl_2166 IPR002729 CRISPR-associated protein Cas1 Clocl_2166 IPR042206 CRISPR-associated endonuclease Cas1, C-terminal domain Clocl_2166 IPR019858 CRISPR-associated protein Cas1, HMARI/TNEAP subtype Clocl_2166 IPR042211 CRISPR-associated endonuclease Cas1, N-terminal domain Clocl_2181 IPR005144 ATP-cone domain Clocl_2181 IPR003796 Ribonucleotide reductase regulator NrdR-like Clocl_2182 IPR027275 PRC-barrel domain Clocl_2182 IPR014238 Sporulation protein YlmC/YmxH Clocl_2182 IPR011033 PRC-barrel-like superfamily Clocl_2183 IPR014322 RNA polymerase sigma-B/F/G type Clocl_2183 IPR014284 RNA polymerase sigma-70 like domain Clocl_2183 IPR000943 RNA polymerase sigma-70 Clocl_2183 IPR007627 RNA polymerase sigma-70 region 2 Clocl_2183 IPR007624 RNA polymerase sigma-70 region 3 Clocl_2183 IPR007630 RNA polymerase sigma-70 region 4 Clocl_2183 IPR013325 RNA polymerase sigma factor, region 2 Clocl_2183 IPR013324 RNA polymerase sigma factor, region 3/4-like Clocl_2183 IPR014212 RNA polymerase sigma-G type Clocl_2184 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_2184 IPR013324 RNA polymerase sigma factor, region 3/4-like Clocl_2184 IPR013325 RNA polymerase sigma factor, region 2 Clocl_2184 IPR014284 RNA polymerase sigma-70 like domain Clocl_2184 IPR007627 RNA polymerase sigma-70 region 2 Clocl_2184 IPR000943 RNA polymerase sigma-70 Clocl_2184 IPR014200 RNA polymerase sigma-E type Clocl_2184 IPR007630 RNA polymerase sigma-70 region 4 Clocl_2187 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Clocl_2187 IPR003008 Tubulin/FtsZ, GTPase domain Clocl_2187 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Clocl_2187 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Clocl_2187 IPR024757 Cell division protein FtsZ, C-terminal Clocl_2187 IPR008280 Tubulin/FtsZ, C-terminal Clocl_2187 IPR000158 Cell division protein FtsZ Clocl_2187 IPR020805 Cell division protein FtsZ, conserved site Clocl_2188 IPR020823 Cell division protein FtsA Clocl_2188 IPR003494 SHS2 domain inserted in FtsA Clocl_2189 IPR009709 Protein of unknown function DUF1290 Clocl_2190 IPR026580 Cell division protein DivIB Clocl_2190 IPR034746 POTRA domain Clocl_2190 IPR013685 POTRA domain, FtsQ-type Clocl_2192 IPR013564 Domain of unknown function DUF1727 Clocl_2192 IPR036565 Mur-like, catalytic domain superfamily Clocl_2192 IPR013221 Mur ligase, central Clocl_2193 IPR029062 Class I glutamine amidotransferase-like Clocl_2193 IPR033949 Cobyric acid synthase, glutamine amidotransferase type 1 Clocl_2193 IPR011698 CobB/CobQ-like glutamine amidotransferase Clocl_2193 IPR017929 CobB/CobQ glutamine amidotransferase Clocl_2194 IPR001119 S-layer homology domain Clocl_2194 IPR031158 Glycosyl hydrolases family 10, active site Clocl_2194 IPR001000 Glycoside hydrolase family 10 domain Clocl_2194 IPR008979 Galactose-binding-like domain superfamily Clocl_2194 IPR003305 Carbohydrate-binding, CenC-like Clocl_2194 IPR010502 Carbohydrate-binding domain, family 9 Clocl_2194 IPR018087 Glycoside hydrolase, family 5, conserved site Clocl_2194 IPR017853 Glycoside hydrolase superfamily Clocl_2197 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type Clocl_2197 IPR004154 Anticodon-binding Clocl_2197 IPR036621 Anticodon-binding domain superfamily Clocl_2197 IPR002316 Proline-tRNA ligase, class IIa Clocl_2197 IPR006195 Aminoacyl-tRNA synthetase, class II Clocl_2197 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) Clocl_2197 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain Clocl_2197 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily Clocl_2197 IPR033730 Prokaryote proline-tRNA ligase core domain Clocl_2197 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 Clocl_2198 IPR039697 Iron-type alcohol dehydrogenase-like Clocl_2198 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA Clocl_2199 IPR029062 Class I glutamine amidotransferase-like Clocl_2199 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO Clocl_2199 IPR021196 PdxT/SNO family, conserved site Clocl_2200 IPR013785 Aldolase-type TIM barrel Clocl_2200 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ Clocl_2200 IPR033755 PdxS/SNZ N-terminal domain Clocl_2200 IPR011060 Ribulose-phosphate binding barrel Clocl_2201 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_2201 IPR000524 Transcription regulator HTH, GntR Clocl_2201 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Clocl_2201 IPR015424 Pyridoxal phosphate-dependent transferase Clocl_2201 IPR004839 Aminotransferase, class I/classII Clocl_2201 IPR036390 Winged helix DNA-binding domain superfamily Clocl_2202 IPR005856 Cysteine synthase Clocl_2202 IPR005859 Cysteine synthase CysK Clocl_2202 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site Clocl_2202 IPR001926 Pyridoxal-phosphate dependent enzyme Clocl_2202 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Clocl_2203 IPR015424 Pyridoxal phosphate-dependent transferase Clocl_2203 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase Clocl_2203 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme Clocl_2203 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Clocl_2203 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Clocl_2204 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_2204 IPR000944 Transcription regulator Rrf2-type Clocl_2204 IPR036390 Winged helix DNA-binding domain superfamily Clocl_2204 IPR030489 Transcription regulator Rrf2-type, conserved site Clocl_2204 IPR010242 Transcription factor HTH, IscR Clocl_2205 IPR030489 Transcription regulator Rrf2-type, conserved site Clocl_2205 IPR000944 Transcription regulator Rrf2-type Clocl_2205 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_2205 IPR036390 Winged helix DNA-binding domain superfamily Clocl_2206 IPR029062 Class I glutamine amidotransferase-like Clocl_2206 IPR005697 Homoserine O-succinyltransferase MetA Clocl_2206 IPR033752 MetA family Clocl_2207 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ Clocl_2207 IPR036163 Heavy metal-associated domain superfamily Clocl_2207 IPR006122 Heavy metal-associated domain, copper ion-binding Clocl_2207 IPR017969 Heavy-metal-associated, conserved site Clocl_2207 IPR006121 Heavy metal-associated domain, HMA Clocl_2208 IPR006121 Heavy metal-associated domain, HMA Clocl_2208 IPR001757 P-type ATPase Clocl_2208 IPR027256 P-type ATPase, subfamily IB Clocl_2208 IPR036163 Heavy metal-associated domain superfamily Clocl_2208 IPR006122 Heavy metal-associated domain, copper ion-binding Clocl_2208 IPR023299 P-type ATPase, cytoplasmic domain N Clocl_2208 IPR023214 HAD superfamily Clocl_2208 IPR018303 P-type ATPase, phosphorylation site Clocl_2208 IPR023298 P-type ATPase, transmembrane domain superfamily Clocl_2208 IPR017969 Heavy-metal-associated, conserved site Clocl_2208 IPR036412 HAD-like superfamily Clocl_2208 IPR008250 P-type ATPase, A domain superfamily Clocl_2210 IPR003660 HAMP domain Clocl_2210 IPR003594 Histidine kinase/HSP90-like ATPase Clocl_2210 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clocl_2210 IPR005467 Histidine kinase domain Clocl_2210 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Clocl_2210 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Clocl_2210 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Clocl_2211 IPR016032 Signal transduction response regulator, C-terminal effector Clocl_2211 IPR011006 CheY-like superfamily Clocl_2211 IPR001867 OmpR/PhoB-type DNA-binding domain Clocl_2211 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_2211 IPR039420 Transcriptional regulatory protein WalR-like Clocl_2211 IPR001789 Signal transduction response regulator, receiver domain Clocl_2218 IPR025202 Phospholipase D-like domain Clocl_2218 IPR022924 Cardiolipin synthase Clocl_2218 IPR001736 Phospholipase D/Transphosphatidylase Clocl_2220 IPR013325 RNA polymerase sigma factor, region 2 Clocl_2220 IPR039425 RNA polymerase sigma-70 like Clocl_2220 IPR014284 RNA polymerase sigma-70 like domain Clocl_2220 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site Clocl_2220 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 Clocl_2220 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_2220 IPR013324 RNA polymerase sigma factor, region 3/4-like Clocl_2220 IPR007627 RNA polymerase sigma-70 region 2 Clocl_2221 IPR029058 Alpha/Beta hydrolase fold Clocl_2221 IPR008391 Acetyl xylan esterase Clocl_2221 IPR039069 Carbohydrate esterase 7 family Clocl_2222 IPR022880 DNA polymerase IV Clocl_2222 IPR001126 UmuC domain Clocl_2222 IPR036775 DNA polymerase, Y-family, little finger domain superfamily Clocl_2222 IPR017961 DNA polymerase, Y-family, little finger domain Clocl_2223 IPR017853 Glycoside hydrolase superfamily Clocl_2223 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily Clocl_2223 IPR001764 Glycoside hydrolase, family 3, N-terminal Clocl_2223 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily Clocl_2223 IPR019800 Glycoside hydrolase, family 3, active site Clocl_2223 IPR026891 Fibronectin type III-like domain Clocl_2223 IPR013783 Immunoglobulin-like fold Clocl_2223 IPR002772 Glycoside hydrolase family 3 C-terminal domain Clocl_2224 IPR011051 RmlC-like cupin domain superfamily Clocl_2224 IPR014710 RmlC-like jelly roll fold Clocl_2224 IPR010864 D-lyxose isomerase Clocl_2225 IPR018221 Glycoside hydrolase family 9, His active site Clocl_2225 IPR033126 Glycosyl hydrolases family 9, Asp/Glu active sites Clocl_2225 IPR001701 Glycoside hydrolase family 9 Clocl_2225 IPR036966 Carbohydrate-binding module 3 superfamily Clocl_2225 IPR001956 Carbohydrate-binding module 3 Clocl_2225 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clocl_2225 IPR012341 Six-hairpin glycosidase-like superfamily Clocl_2225 IPR008928 Six-hairpin glycosidase superfamily Clocl_2227 IPR000462 CDP-alcohol phosphatidyltransferase Clocl_2227 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase Clocl_2229 IPR035966 Phosphofructokinase superfamily Clocl_2229 IPR000023 Phosphofructokinase domain Clocl_2229 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type Clocl_2229 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic Clocl_2229 IPR022953 ATP-dependent 6-phosphofructokinase Clocl_2229 IPR015912 Phosphofructokinase, conserved site Clocl_2232 IPR000824 Transcription attenuation protein MtrB Clocl_2232 IPR016031 Tryptophan RNA-binding attenuator protein-like domain superfamily Clocl_2232 IPR023558 Tryptophan RNA-binding attenuator protein domain Clocl_2233 IPR003141 Polymerase/histidinol phosphatase, N-terminal Clocl_2233 IPR004805 DNA polymerase III, alpha subunit Clocl_2233 IPR004013 PHP domain Clocl_2233 IPR016195 Polymerase/histidinol phosphatase-like Clocl_2233 IPR029460 DNA polymerase, helix-hairpin-helix motif Clocl_2233 IPR040982 DNA polymerase III alpha subunit finger domain Clocl_2233 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain Clocl_2233 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain Clocl_2233 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type Clocl_2234 IPR016066 Alpha-D-phosphohexomutase, conserved site Clocl_2234 IPR005841 Alpha-D-phosphohexomutase superfamily Clocl_2234 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily Clocl_2234 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II Clocl_2234 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III Clocl_2234 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III Clocl_2234 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I Clocl_2234 IPR005843 Alpha-D-phosphohexomutase, C-terminal Clocl_2235 IPR001207 Transposase, mutator type Clocl_2237 IPR009242 Protein of unknown function DUF896 Clocl_2239 IPR000792 Transcription regulator LuxR, C-terminal Clocl_2239 IPR001789 Signal transduction response regulator, receiver domain Clocl_2239 IPR011006 CheY-like superfamily Clocl_2239 IPR016032 Signal transduction response regulator, C-terminal effector Clocl_2240 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain Clocl_2240 IPR016381 Signal transduction histidine kinase, DegS Clocl_2240 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clocl_2240 IPR003594 Histidine kinase/HSP90-like ATPase Clocl_2240 IPR008595 Sensor DegS Clocl_2240 IPR005467 Histidine kinase domain Clocl_2241 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Clocl_2241 IPR014226 Sporulation integral membrane protein YlbJ Clocl_2243 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clocl_2243 IPR001980 Phosphopantetheine adenylyltransferase Clocl_2243 IPR004821 Cytidyltransferase-like domain Clocl_2244 IPR004398 RNA methyltransferase, RsmD Clocl_2244 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clocl_2245 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_2245 IPR004609 ATP-dependent DNA helicase RecG Clocl_2245 IPR011545 DEAD/DEAH box helicase domain Clocl_2245 IPR014001 Helicase superfamily 1/2, ATP-binding domain Clocl_2245 IPR001650 Helicase, C-terminal Clocl_2245 IPR012340 Nucleic acid-binding, OB-fold Clocl_2245 IPR033454 RecG, wedge domain Clocl_2246 IPR034704 L28p-like Clocl_2246 IPR037147 Ribosomal protein L28/L24 superfamily Clocl_2246 IPR001383 Ribosomal protein L28 Clocl_2246 IPR026569 Ribosomal protein L28/L24 Clocl_2249 IPR000160 GGDEF domain Clocl_2249 IPR029787 Nucleotide cyclase Clocl_2250 IPR020823 Cell division protein FtsA Clocl_2250 IPR003494 SHS2 domain inserted in FtsA Clocl_2251 IPR011257 DNA glycosylase Clocl_2251 IPR005759 Endonuclease III Clocl_2251 IPR004036 Endonuclease III-like, conserved site-2 Clocl_2251 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif Clocl_2251 IPR004035 Endonuclease III, iron-sulphur binding site Clocl_2251 IPR003265 HhH-GPD domain Clocl_2251 IPR000445 Helix-hairpin-helix motif Clocl_2251 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Clocl_2252 IPR001296 Glycosyl transferase, family 1 Clocl_2252 IPR011835 Bacterial/plant glycogen synthase Clocl_2252 IPR013534 Starch synthase, catalytic domain Clocl_2253 IPR029787 Nucleotide cyclase Clocl_2253 IPR003607 HD/PDEase domain Clocl_2253 IPR000160 GGDEF domain Clocl_2253 IPR037522 HD-GYP domain Clocl_2253 IPR006674 HD domain Clocl_2254 IPR001940 Peptidase S1C Clocl_2254 IPR009003 Peptidase S1, PA clan Clocl_2254 IPR036034 PDZ superfamily Clocl_2254 IPR001478 PDZ domain Clocl_2255 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Clocl_2255 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Clocl_2255 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Clocl_2255 IPR003660 HAMP domain Clocl_2255 IPR003594 Histidine kinase/HSP90-like ATPase Clocl_2255 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clocl_2255 IPR005467 Histidine kinase domain Clocl_2256 IPR011006 CheY-like superfamily Clocl_2256 IPR039420 Transcriptional regulatory protein WalR-like Clocl_2256 IPR001789 Signal transduction response regulator, receiver domain Clocl_2256 IPR016032 Signal transduction response regulator, C-terminal effector Clocl_2256 IPR001867 OmpR/PhoB-type DNA-binding domain Clocl_2256 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_2260 IPR006124 Metalloenzyme Clocl_2260 IPR004456 2,3-bisphosphoglycerate-independent phosphoglycerate mutase Clocl_2260 IPR042253 2,3-bisphosphoglycerate-independent phosphoglycerate mutase superfamily Clocl_2260 IPR023665 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, prokaryotes Clocl_2260 IPR017850 Alkaline-phosphatase-like, core domain superfamily Clocl_2262 IPR000551 MerR-type HTH domain Clocl_2262 IPR009061 Putative DNA-binding domain superfamily Clocl_2262 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain Clocl_2262 IPR012925 TipAS antibiotic-recognition domain Clocl_2263 IPR003738 SOS response associated peptidase (SRAP) Clocl_2263 IPR036590 SOS response associated peptidase-like Clocl_2265 IPR001126 UmuC domain Clocl_2265 IPR022880 DNA polymerase IV Clocl_2265 IPR017961 DNA polymerase, Y-family, little finger domain Clocl_2265 IPR036775 DNA polymerase, Y-family, little finger domain superfamily Clocl_2273 IPR003439 ABC transporter-like Clocl_2273 IPR017871 ABC transporter, conserved site Clocl_2273 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_2273 IPR003593 AAA+ ATPase domain Clocl_2273 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type Clocl_2274 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Clocl_2274 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain Clocl_2274 IPR035906 MetI-like superfamily Clocl_2275 IPR018313 Solute-binding protein family 3, conserved site Clocl_2275 IPR001320 Ionotropic glutamate receptor Clocl_2275 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Clocl_2279 IPR002698 5-formyltetrahydrofolate cyclo-ligase Clocl_2279 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily Clocl_2279 IPR037171 NagB/RpiA transferase-like Clocl_2282 IPR001021 Ribosomal protein L25, long-form Clocl_2282 IPR037121 Ribosomal protein L25, C-terminal Clocl_2282 IPR020057 Ribosomal protein L25, beta domain Clocl_2282 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily Clocl_2282 IPR029751 Ribosomal protein L25 Clocl_2282 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Clocl_2286 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clocl_2286 IPR008513 tRNA(Met) cytidine acetate ligase Clocl_2287 IPR001587 Ribonuclease J, conserved site Clocl_2287 IPR041636 Ribonuclease J, C-terminal Clocl_2287 IPR042173 Ribonuclease J, domain 2 Clocl_2287 IPR030854 Ribonuclease J, bacteria Clocl_2287 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain Clocl_2287 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Clocl_2287 IPR001279 Metallo-beta-lactamase Clocl_2287 IPR004613 Ribonuclease J Clocl_2288 IPR001296 Glycosyl transferase, family 1 Clocl_2288 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Clocl_2289 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_2289 IPR003714 PhoH-like protein Clocl_2289 IPR029060 PIN-like domain superfamily Clocl_2289 IPR002716 PIN domain Clocl_2290 IPR011051 RmlC-like cupin domain superfamily Clocl_2290 IPR013096 Cupin 2, conserved barrel Clocl_2290 IPR014710 RmlC-like jelly roll fold Clocl_2292 IPR030655 NifH/chlL conserved site Clocl_2292 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_2292 IPR005977 Nitrogenase iron protein NifH Clocl_2292 IPR000392 NifH/frxC family Clocl_2294 IPR001119 S-layer homology domain Clocl_2294 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clocl_2294 IPR002102 Cellulosome anchoring protein, cohesin domain Clocl_2295 IPR010089 Flavoprotein WrbA-like Clocl_2295 IPR008254 Flavodoxin/nitric oxide synthase Clocl_2295 IPR005025 NADPH-dependent FMN reductase-like Clocl_2295 IPR037513 NAD(P)H dehydrogenase (quinone), prokaryotic Clocl_2295 IPR029039 Flavoprotein-like superfamily Clocl_2296 IPR006121 Heavy metal-associated domain, HMA Clocl_2296 IPR006122 Heavy metal-associated domain, copper ion-binding Clocl_2296 IPR017969 Heavy-metal-associated, conserved site Clocl_2296 IPR008250 P-type ATPase, A domain superfamily Clocl_2296 IPR036412 HAD-like superfamily Clocl_2296 IPR027256 P-type ATPase, subfamily IB Clocl_2296 IPR023298 P-type ATPase, transmembrane domain superfamily Clocl_2296 IPR018303 P-type ATPase, phosphorylation site Clocl_2296 IPR023299 P-type ATPase, cytoplasmic domain N Clocl_2296 IPR023214 HAD superfamily Clocl_2296 IPR001757 P-type ATPase Clocl_2296 IPR036163 Heavy metal-associated domain superfamily Clocl_2297 IPR003593 AAA+ ATPase domain Clocl_2297 IPR003439 ABC transporter-like Clocl_2297 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_2299 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Clocl_2299 IPR035906 MetI-like superfamily Clocl_2300 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Clocl_2300 IPR035906 MetI-like superfamily Clocl_2301 IPR000318 Nitrogenase component 1, conserved site Clocl_2301 IPR005973 Nitrogenase MoFe cofactor biosynthesis protein NifE Clocl_2301 IPR000510 Nitrogenase/oxidoreductase, component 1 Clocl_2302 IPR000510 Nitrogenase/oxidoreductase, component 1 Clocl_2302 IPR000318 Nitrogenase component 1, conserved site Clocl_2302 IPR005973 Nitrogenase MoFe cofactor biosynthesis protein NifE Clocl_2303 IPR000257 Uroporphyrinogen decarboxylase (URO-D) Clocl_2303 IPR038071 UROD/MetE-like superfamily Clocl_2303 IPR006361 Uroporphyrinogen decarboxylase HemE Clocl_2304 IPR012741 Methyltransferase cognate corrinoid protein Clocl_2304 IPR036594 Methionine synthase domain Clocl_2304 IPR006158 Cobalamin (vitamin B12)-binding domain Clocl_2304 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Clocl_2304 IPR036724 Cobalamin-binding domain superfamily Clocl_2305 IPR001926 Pyridoxal-phosphate dependent enzyme Clocl_2305 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site Clocl_2305 IPR005859 Cysteine synthase CysK Clocl_2305 IPR005856 Cysteine synthase Clocl_2305 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Clocl_2306 IPR029479 Nitroreductase Clocl_2306 IPR000415 Nitroreductase-like Clocl_2306 IPR033878 Nitroreductase NfsB-like Clocl_2307 IPR013785 Aldolase-type TIM barrel Clocl_2307 IPR007197 Radical SAM Clocl_2307 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site Clocl_2307 IPR005980 Nitrogenase cofactor biosynthesis protein NifB Clocl_2307 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily Clocl_2307 IPR034165 FeMo cofactor biosynthesis protein NifB, C-terminal Clocl_2307 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis Clocl_2311 IPR001207 Transposase, mutator type Clocl_2313 IPR024474 Zinc-finger binding domain of transposase IS66 Clocl_2313 IPR024463 Transposase TnpC, homeodomain Clocl_2313 IPR004291 Transposase, IS66 Clocl_2313 IPR039552 Transposase IS66, C-terminal Clocl_2314 IPR003593 AAA+ ATPase domain Clocl_2314 IPR001270 ClpA/B family Clocl_2314 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein Clocl_2314 IPR002611 IstB-like ATP-binding protein Clocl_2314 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_2315 IPR017894 HTH domain, IS21 transposase-type Clocl_2315 IPR036397 Ribonuclease H superfamily Clocl_2315 IPR001584 Integrase, catalytic core Clocl_2315 IPR012337 Ribonuclease H-like superfamily Clocl_2317 IPR002514 Transposase IS3/IS911family Clocl_2317 IPR009057 Homeobox-like domain superfamily Clocl_2321 IPR002686 Transposase IS200-like Clocl_2321 IPR036515 Transposase IS200-like superfamily Clocl_2329 IPR008878 Transposase IS66, Orf2 Clocl_2331 IPR039552 Transposase IS66, C-terminal Clocl_2331 IPR004291 Transposase, IS66 Clocl_2331 IPR024463 Transposase TnpC, homeodomain Clocl_2331 IPR024474 Zinc-finger binding domain of transposase IS66 Clocl_2332 IPR008878 Transposase IS66, Orf2 Clocl_2333 IPR002514 Transposase IS3/IS911family Clocl_2333 IPR009057 Homeobox-like domain superfamily Clocl_2340 IPR008878 Transposase IS66, Orf2 Clocl_2341 IPR002514 Transposase IS3/IS911family Clocl_2341 IPR009057 Homeobox-like domain superfamily Clocl_2344 IPR031325 RHS repeat Clocl_2344 IPR008979 Galactose-binding-like domain superfamily Clocl_2344 IPR022385 Rhs repeat-associated core Clocl_2344 IPR006530 YD repeat Clocl_2349 IPR039552 Transposase IS66, C-terminal Clocl_2349 IPR004291 Transposase, IS66 Clocl_2349 IPR024463 Transposase TnpC, homeodomain Clocl_2349 IPR024474 Zinc-finger binding domain of transposase IS66 Clocl_2350 IPR008878 Transposase IS66, Orf2 Clocl_2351 IPR002514 Transposase IS3/IS911family Clocl_2351 IPR009057 Homeobox-like domain superfamily Clocl_2353 IPR008979 Galactose-binding-like domain superfamily Clocl_2353 IPR022385 Rhs repeat-associated core Clocl_2353 IPR031325 RHS repeat Clocl_2353 IPR006530 YD repeat Clocl_2354 IPR003343 Bacterial Ig-like, group 2 Clocl_2354 IPR008964 Invasin/intimin cell-adhesion fragments Clocl_2360 IPR017894 HTH domain, IS21 transposase-type Clocl_2360 IPR001584 Integrase, catalytic core Clocl_2366 IPR001270 ClpA/B family Clocl_2366 IPR003593 AAA+ ATPase domain Clocl_2366 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein Clocl_2366 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_2366 IPR002611 IstB-like ATP-binding protein Clocl_2367 IPR012337 Ribonuclease H-like superfamily Clocl_2367 IPR001584 Integrase, catalytic core Clocl_2367 IPR017894 HTH domain, IS21 transposase-type Clocl_2372 IPR007347 Sporulation stage V, protein S Clocl_2372 IPR036882 Alba-like domain superfamily Clocl_2375 IPR000999 Ribonuclease III domain Clocl_2375 IPR011907 Ribonuclease III Clocl_2375 IPR014720 Double-stranded RNA-binding domain Clocl_2375 IPR036389 Ribonuclease III, endonuclease domain superfamily Clocl_2376 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 Clocl_2376 IPR000794 Beta-ketoacyl synthase Clocl_2376 IPR018201 Beta-ketoacyl synthase, active site Clocl_2376 IPR014031 Beta-ketoacyl synthase, C-terminal Clocl_2376 IPR014030 Beta-ketoacyl synthase, N-terminal Clocl_2376 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Clocl_2376 IPR016039 Thiolase-like Clocl_2377 IPR006162 Phosphopantetheine attachment site Clocl_2377 IPR003231 Acyl carrier protein (ACP) Clocl_2377 IPR036736 ACP-like superfamily Clocl_2377 IPR020806 Polyketide synthase, phosphopantetheine-binding domain Clocl_2377 IPR009081 Phosphopantetheine binding ACP domain Clocl_2378 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase Clocl_2378 IPR036291 NAD(P)-binding domain superfamily Clocl_2378 IPR002347 Short-chain dehydrogenase/reductase SDR Clocl_2379 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Clocl_2379 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type Clocl_2379 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Clocl_2379 IPR014043 Acyl transferase Clocl_2379 IPR001227 Acyl transferase domain superfamily Clocl_2379 IPR024925 Malonyl CoA-acyl carrier protein transacylase Clocl_2380 IPR016039 Thiolase-like Clocl_2380 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Clocl_2380 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal Clocl_2380 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 Clocl_2381 IPR012281 Phospholipid biosynthesis protein, PlsX-like Clocl_2381 IPR003664 Fatty acid synthesis PlsX protein Clocl_2382 IPR017275 Transcription factor FapR Clocl_2382 IPR006683 Thioesterase domain Clocl_2382 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_2382 IPR036390 Winged helix DNA-binding domain superfamily Clocl_2382 IPR029069 HotDog domain superfamily Clocl_2383 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase Clocl_2383 IPR000462 CDP-alcohol phosphatidyltransferase Clocl_2384 IPR041582 RimO, TRAM domain Clocl_2384 IPR006638 Elp3/MiaB/NifB Clocl_2384 IPR005839 Methylthiotransferase Clocl_2384 IPR020612 Methylthiotransferase, conserved site Clocl_2384 IPR013848 Methylthiotransferase, N-terminal Clocl_2384 IPR038135 Methylthiotransferase, N-terminal domain superfamily Clocl_2384 IPR005840 Ribosomal protein S12 methylthiotransferase RimO Clocl_2384 IPR007197 Radical SAM Clocl_2384 IPR023404 Radical SAM, alpha/beta horseshoe Clocl_2384 IPR002792 TRAM domain Clocl_2388 IPR029033 Histidine phosphatase superfamily Clocl_2388 IPR005952 Phosphoglycerate mutase 1 Clocl_2388 IPR013078 Histidine phosphatase superfamily, clade-1 Clocl_2389 IPR013785 Aldolase-type TIM barrel Clocl_2389 IPR033888 Dihydroorotate dehydrogenase, class 1B Clocl_2389 IPR023359 Dihydroorotate dehydrogenase A, chain A, domain 2 Clocl_2389 IPR005720 Dihydroorotate dehydrogenase domain Clocl_2389 IPR024920 Dihydroorotate dehydrogenase, class 1 Clocl_2389 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 Clocl_2389 IPR001295 Dihydroorotate dehydrogenase, conserved site Clocl_2390 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Clocl_2390 IPR017938 Riboflavin synthase-like beta-barrel Clocl_2390 IPR000951 Phthalate dioxygenase reductase Clocl_2390 IPR017927 FAD-binding domain, ferredoxin reductase-type Clocl_2390 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain Clocl_2390 IPR037117 Dihydroorotate dehydrogenase, electron transfer subunit, Fe-S binding domain superfamily Clocl_2390 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit Clocl_2390 IPR023455 Dihydroorotate dehydrogenase electron transfer subunit Clocl_2391 IPR011607 Methylglyoxal synthase-like domain Clocl_2391 IPR011761 ATP-grasp fold Clocl_2391 IPR006275 Carbamoyl-phosphate synthase, large subunit Clocl_2391 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain Clocl_2391 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily Clocl_2391 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain Clocl_2391 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain Clocl_2391 IPR036914 Methylglyoxal synthase-like domain superfamily Clocl_2391 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain Clocl_2391 IPR016185 Pre-ATP-grasp domain superfamily Clocl_2392 IPR029062 Class I glutamine amidotransferase-like Clocl_2392 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily Clocl_2392 IPR017926 Glutamine amidotransferase Clocl_2392 IPR006274 Carbamoyl-phosphate synthase, small subunit Clocl_2392 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain Clocl_2392 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain Clocl_2393 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 Clocl_2393 IPR011060 Ribulose-phosphate binding barrel Clocl_2393 IPR001754 Orotidine 5'-phosphate decarboxylase domain Clocl_2393 IPR013785 Aldolase-type TIM barrel Clocl_2394 IPR032466 Metal-dependent hydrolase Clocl_2394 IPR006680 Amidohydrolase-related Clocl_2394 IPR004722 Dihydroorotase Clocl_2394 IPR002195 Dihydroorotase, conserved site Clocl_2394 IPR011059 Metal-dependent hydrolase, composite domain superfamily Clocl_2395 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding Clocl_2395 IPR006130 Aspartate/ornithine carbamoyltransferase Clocl_2395 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily Clocl_2395 IPR002082 Aspartate carbamoyltransferase Clocl_2395 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain Clocl_2397 IPR023050 Bifunctional protein PyrR Clocl_2397 IPR029057 Phosphoribosyltransferase-like Clocl_2397 IPR000836 Phosphoribosyltransferase domain Clocl_2402 IPR003849 Preprotein translocase YajC Clocl_2403 IPR004803 tRNA-guanine transglycosylase Clocl_2403 IPR036511 Queuine tRNA-ribosyltransferase-like Clocl_2403 IPR002616 tRNA-guanine(15) transglycosylase-like Clocl_2404 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily Clocl_2404 IPR042119 QueA, domain 2 Clocl_2404 IPR042118 QueA, domain 1 Clocl_2404 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA Clocl_2405 IPR007253 Putative cell wall binding repeat 2 Clocl_2405 IPR013486 Sporulation stage II protein D, amidase enhancer LytB Clocl_2405 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal Clocl_2406 IPR013785 Aldolase-type TIM barrel Clocl_2406 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA Clocl_2406 IPR002220 DapA-like Clocl_2406 IPR020625 Schiff base-forming aldolase, active site Clocl_2406 IPR020624 Schiff base-forming aldolase, conserved site Clocl_2407 IPR036291 NAD(P)-binding domain superfamily Clocl_2407 IPR022663 Dihydrodipicolinate reductase, C-terminal Clocl_2407 IPR022664 Dihydrodipicolinate reductase, conserved site Clocl_2407 IPR023940 Dihydrodipicolinate reductase Clocl_2407 IPR000846 Dihydrodipicolinate reductase, N-terminal Clocl_2408 IPR001048 Aspartate/glutamate/uridylate kinase Clocl_2408 IPR036393 Acetylglutamate kinase-like superfamily Clocl_2408 IPR002912 ACT domain Clocl_2408 IPR027795 CASTOR, ACT domain Clocl_2408 IPR018042 Aspartate kinase, conserved site Clocl_2408 IPR001341 Aspartate kinase Clocl_2408 IPR005260 Aspartate kinase, monofunctional class Clocl_2408 IPR041740 Aspartokinase catalytic domain Clocl_2409 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_2409 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR Clocl_2409 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain Clocl_2411 IPR029035 DHS-like NAD/FAD-binding domain superfamily Clocl_2411 IPR003000 Sirtuin family Clocl_2411 IPR026590 Sirtuin family, catalytic core domain Clocl_2411 IPR028628 Sirtuin, class U Clocl_2411 IPR026591 Sirtuin, catalytic core small domain superfamily Clocl_2412 IPR037063 Bacterial Pleckstrin homology domain superfamily Clocl_2412 IPR012544 Bacterial Pleckstrin homology domain Clocl_2413 IPR003439 ABC transporter-like Clocl_2413 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_2413 IPR032781 ABC-transporter extension domain Clocl_2413 IPR003593 AAA+ ATPase domain Clocl_2416 IPR029044 Nucleotide-diphospho-sugar transferases Clocl_2416 IPR001173 Glycosyltransferase 2-like Clocl_2419 IPR001986 Enolpyruvate transferase domain Clocl_2419 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta Clocl_2419 IPR036968 Enolpyruvate transferase domain superfamily Clocl_2419 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase Clocl_2420 IPR007235 Glycosyl transferase, family 28, C-terminal Clocl_2420 IPR006009 N-acetylglucosaminyltransferase, MurG Clocl_2420 IPR004276 Glycosyltransferase family 28, N-terminal domain Clocl_2421 IPR013437 Probable peptidoglycan glycosyltransferase FtsW Clocl_2421 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA Clocl_2421 IPR013438 Sporulation stage V, protein E Clocl_2421 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site Clocl_2422 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site Clocl_2422 IPR000715 Glycosyl transferase, family 4 Clocl_2422 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase Clocl_2423 IPR013221 Mur ligase, central Clocl_2423 IPR000713 Mur ligase, N-terminal catalytic domain Clocl_2423 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase Clocl_2423 IPR036615 Mur ligase, C-terminal domain superfamily Clocl_2423 IPR004101 Mur ligase, C-terminal Clocl_2423 IPR035911 MurE/MurF, N-terminal Clocl_2423 IPR036565 Mur-like, catalytic domain superfamily Clocl_2424 IPR013221 Mur ligase, central Clocl_2424 IPR036565 Mur-like, catalytic domain superfamily Clocl_2424 IPR004101 Mur ligase, C-terminal Clocl_2424 IPR036615 Mur ligase, C-terminal domain superfamily Clocl_2424 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase Clocl_2424 IPR000713 Mur ligase, N-terminal catalytic domain Clocl_2424 IPR035911 MurE/MurF, N-terminal Clocl_2425 IPR011927 Stage V sporulation protein D Clocl_2425 IPR001460 Penicillin-binding protein, transpeptidase Clocl_2425 IPR036138 Penicillin-binding protein, dimerisation domain superfamily Clocl_2425 IPR005311 Penicillin-binding protein, dimerisation domain Clocl_2425 IPR005543 PASTA domain Clocl_2425 IPR012338 Beta-lactamase/transpeptidase-like Clocl_2427 IPR002903 Ribosomal RNA small subunit methyltransferase H Clocl_2427 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily Clocl_2427 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clocl_2428 IPR003444 Transcriptional regulator MraZ Clocl_2428 IPR035644 MraZ, C-terminal Clocl_2428 IPR020603 MraZ domain Clocl_2428 IPR035642 MraZ, N-terminal Clocl_2428 IPR038619 MraZ superfamily Clocl_2428 IPR007159 SpoVT-AbrB domain Clocl_2428 IPR037914 SpoVT-AbrB domain superfamily Clocl_2429 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site Clocl_2429 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB Clocl_2429 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA Clocl_2431 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt Clocl_2432 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like Clocl_2432 IPR011765 Peptidase M16, N-terminal Clocl_2432 IPR007863 Peptidase M16, C-terminal Clocl_2433 IPR007863 Peptidase M16, C-terminal Clocl_2433 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like Clocl_2434 IPR029787 Nucleotide cyclase Clocl_2434 IPR000160 GGDEF domain Clocl_2435 IPR017853 Glycoside hydrolase superfamily Clocl_2435 IPR018208 Glycoside hydrolase family 11, active site 1 Clocl_2435 IPR013319 Glycoside hydrolase family 11/12 Clocl_2435 IPR001000 Glycoside hydrolase family 10 domain Clocl_2435 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Clocl_2435 IPR033119 Glycoside hydrolase family 11, active site 2 Clocl_2435 IPR033123 Glycosyl hydrolases family 11 (GH11) domain Clocl_2435 IPR031158 Glycosyl hydrolases family 10, active site Clocl_2435 IPR001137 Glycoside hydrolase family 11 Clocl_2436 IPR028082 Periplasmic binding protein-like I Clocl_2436 IPR006377 Catabolite control protein A Clocl_2436 IPR000843 LacI-type HTH domain Clocl_2436 IPR010982 Lambda repressor-like, DNA-binding domain superfamily Clocl_2437 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Clocl_2437 IPR006710 Glycoside hydrolase, family 43 Clocl_2437 IPR005084 Carbohydrate binding module family 6 Clocl_2437 IPR008979 Galactose-binding-like domain superfamily Clocl_2437 IPR006584 Cellulose binding, type IV Clocl_2438 IPR002105 Dockerin type I repeat Clocl_2438 IPR016134 Dockerin domain Clocl_2438 IPR036439 Dockerin domain superfamily Clocl_2438 IPR013830 SGNH hydrolase-type esterase domain Clocl_2438 IPR036514 SGNH hydrolase superfamily Clocl_2439 IPR023499 L-ribulose-5-phosphate 4-epimerase UlaF Clocl_2439 IPR036409 Class II aldolase/adducin N-terminal domain superfamily Clocl_2439 IPR001303 Class II aldolase/adducin N-terminal Clocl_2440 IPR018484 Carbohydrate kinase, FGGY, N-terminal Clocl_2440 IPR009308 Rhamnose isomerase Clocl_2440 IPR013449 Rhamnulokinase Clocl_2440 IPR036237 Xylose isomerase-like superfamily Clocl_2440 IPR018485 Carbohydrate kinase, FGGY, C-terminal Clocl_2441 IPR018247 EF-Hand 1, calcium-binding site Clocl_2441 IPR029058 Alpha/Beta hydrolase fold Clocl_2441 IPR036439 Dockerin domain superfamily Clocl_2441 IPR005084 Carbohydrate binding module family 6 Clocl_2441 IPR000801 Putative esterase Clocl_2441 IPR006584 Cellulose binding, type IV Clocl_2441 IPR008979 Galactose-binding-like domain superfamily Clocl_2441 IPR001000 Glycoside hydrolase family 10 domain Clocl_2441 IPR002105 Dockerin type I repeat Clocl_2441 IPR031158 Glycosyl hydrolases family 10, active site Clocl_2441 IPR017853 Glycoside hydrolase superfamily Clocl_2441 IPR016134 Dockerin domain Clocl_2442 IPR006710 Glycoside hydrolase, family 43 Clocl_2442 IPR008979 Galactose-binding-like domain superfamily Clocl_2442 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Clocl_2443 IPR017853 Glycoside hydrolase superfamily Clocl_2443 IPR000514 Glycoside hydrolase, family 39 Clocl_2445 IPR013780 Glycosyl hydrolase, all-beta Clocl_2445 IPR017853 Glycoside hydrolase superfamily Clocl_2445 IPR010720 Alpha-L-arabinofuranosidase, C-terminal Clocl_2446 IPR012338 Beta-lactamase/transpeptidase-like Clocl_2446 IPR023650 Beta-lactamase, class-A active site Clocl_2446 IPR001466 Beta-lactamase-related Clocl_2447 IPR016134 Dockerin domain Clocl_2447 IPR002105 Dockerin type I repeat Clocl_2447 IPR036439 Dockerin domain superfamily Clocl_2447 IPR018247 EF-Hand 1, calcium-binding site Clocl_2447 IPR005084 Carbohydrate binding module family 6 Clocl_2447 IPR006584 Cellulose binding, type IV Clocl_2447 IPR029058 Alpha/Beta hydrolase fold Clocl_2447 IPR000801 Putative esterase Clocl_2447 IPR008979 Galactose-binding-like domain superfamily Clocl_2447 IPR001000 Glycoside hydrolase family 10 domain Clocl_2447 IPR031158 Glycosyl hydrolases family 10, active site Clocl_2447 IPR017853 Glycoside hydrolase superfamily Clocl_2449 IPR002606 Riboflavin kinase, bacterial Clocl_2449 IPR015864 FAD synthetase Clocl_2449 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clocl_2449 IPR023465 Riboflavin kinase domain superfamily Clocl_2449 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic Clocl_2449 IPR023468 Riboflavin kinase Clocl_2450 IPR032819 tRNA pseudouridylate synthase B, C-terminal Clocl_2450 IPR014780 tRNA pseudouridine synthase II, TruB Clocl_2450 IPR002501 Pseudouridine synthase II, N-terminal Clocl_2450 IPR020103 Pseudouridine synthase, catalytic domain superfamily Clocl_2451 IPR003156 DHHA1 domain Clocl_2451 IPR001667 DDH domain Clocl_2451 IPR038763 DHH phosphoesterase superfamily Clocl_2452 IPR000238 Ribosome-binding factor A Clocl_2452 IPR015946 K homology domain-like, alpha/beta Clocl_2452 IPR023799 Ribosome-binding factor A domain superfamily Clocl_2452 IPR020053 Ribosome-binding factor A, conserved site Clocl_2453 IPR023115 Translation initiation factor IF- 2, domain 3 Clocl_2453 IPR006847 Translation initiation factor IF-2, N-terminal Clocl_2453 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_2453 IPR005225 Small GTP-binding protein domain Clocl_2453 IPR000795 Transcription factor, GTP-binding domain Clocl_2453 IPR000178 Translation initiation factor aIF-2, bacterial-like Clocl_2453 IPR015760 Translation initiation factor IF- 2 Clocl_2453 IPR036925 Translation initiation factor IF-2, domain 3 superfamily Clocl_2453 IPR009000 Translation protein, beta-barrel domain superfamily Clocl_2454 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 Clocl_2454 IPR029064 50S ribosomal protein L30e-like Clocl_2454 IPR039107 Ribosomal protein YlxQ Clocl_2454 IPR039109 Ribosomal protein L30/YlxQ Clocl_2455 IPR035931 YlxR-like superfamily Clocl_2455 IPR007393 Domain of unknown function DUF448 Clocl_2455 IPR037465 Uncharacterized protein YlxR Clocl_2456 IPR004087 K Homology domain Clocl_2456 IPR012340 Nucleic acid-binding, OB-fold Clocl_2456 IPR025249 KH domain, NusA-like Clocl_2456 IPR009019 K homology domain superfamily, prokaryotic type Clocl_2456 IPR030842 Transcription termination/antitermination protein NusA, bacterial Clocl_2456 IPR036555 NusA, N-terminal domain superfamily Clocl_2456 IPR022967 RNA-binding domain, S1 Clocl_2456 IPR010213 Transcription termination factor NusA Clocl_2456 IPR013735 Transcription factor NusA, N-terminal Clocl_2456 IPR015946 K homology domain-like, alpha/beta Clocl_2456 IPR003029 S1 domain Clocl_2457 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily Clocl_2457 IPR028998 Ribosome maturation factor RimP, C-terminal Clocl_2457 IPR003728 Ribosome maturation factor RimP Clocl_2457 IPR035956 RimP, N-terminal domain superfamily Clocl_2457 IPR028989 Ribosome maturation factor RimP, N-terminal Clocl_2458 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type Clocl_2458 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial Clocl_2458 IPR011005 Dihydropteroate synthase-like Clocl_2459 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase Clocl_2459 IPR036034 PDZ superfamily Clocl_2459 IPR008915 Peptidase M50 Clocl_2459 IPR001478 PDZ domain Clocl_2460 IPR026877 DXP reductoisomerase C-terminal domain Clocl_2460 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal Clocl_2460 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal Clocl_2460 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase Clocl_2460 IPR036169 DXP reductoisomerase, C-terminal domain superfamily Clocl_2460 IPR036291 NAD(P)-binding domain superfamily Clocl_2461 IPR000374 Phosphatidate cytidylyltransferase Clocl_2462 IPR001441 Decaprenyl diphosphate synthase-like Clocl_2462 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site Clocl_2462 IPR036424 Decaprenyl diphosphate synthase-like superfamily Clocl_2464 IPR002661 Ribosome recycling factor Clocl_2464 IPR023584 Ribosome recycling factor domain Clocl_2464 IPR036191 RRF superfamily Clocl_2465 IPR036393 Acetylglutamate kinase-like superfamily Clocl_2465 IPR011817 Uridylate kinase Clocl_2465 IPR015963 Uridylate kinase, bacteria Clocl_2465 IPR001048 Aspartate/glutamate/uridylate kinase Clocl_2466 IPR036402 Elongation factor Ts, dimerisation domain superfamily Clocl_2466 IPR001816 Translation elongation factor EFTs/EF1B Clocl_2466 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation Clocl_2466 IPR009060 UBA-like superfamily Clocl_2466 IPR018101 Translation elongation factor Ts, conserved site Clocl_2467 IPR018130 Ribosomal protein S2, conserved site Clocl_2467 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid Clocl_2467 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily Clocl_2467 IPR001865 Ribosomal protein S2 Clocl_2468 IPR005225 Small GTP-binding protein domain Clocl_2468 IPR006298 GTP-binding protein TypA Clocl_2468 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_2468 IPR042116 GTP-binding protein TypA/BipA, C-terminal Clocl_2468 IPR035651 BipA, domain V Clocl_2468 IPR035647 EF-G domain III/V-like Clocl_2468 IPR000640 Elongation factor EFG, domain V-like Clocl_2468 IPR004161 Translation elongation factor EFTu-like, domain 2 Clocl_2468 IPR031157 Tr-type G domain, conserved site Clocl_2468 IPR009000 Translation protein, beta-barrel domain superfamily Clocl_2468 IPR000795 Transcription factor, GTP-binding domain Clocl_2469 IPR003770 Endolytic murein transglycosylase Clocl_2470 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clocl_2470 IPR002935 Class I-like SAM-dependent O-methyltransferase Clocl_2471 IPR001539 Peptidase U32 Clocl_2471 IPR032525 Peptidase family U32, C-terminal Clocl_2472 IPR001460 Penicillin-binding protein, transpeptidase Clocl_2472 IPR036138 Penicillin-binding protein, dimerisation domain superfamily Clocl_2472 IPR005311 Penicillin-binding protein, dimerisation domain Clocl_2472 IPR012338 Beta-lactamase/transpeptidase-like Clocl_2474 IPR014284 RNA polymerase sigma-70 like domain Clocl_2474 IPR014209 RNA polymerase sigma-K type Clocl_2474 IPR000943 RNA polymerase sigma-70 Clocl_2474 IPR007627 RNA polymerase sigma-70 region 2 Clocl_2474 IPR007630 RNA polymerase sigma-70 region 4 Clocl_2474 IPR013325 RNA polymerase sigma factor, region 2 Clocl_2474 IPR013324 RNA polymerase sigma factor, region 3/4-like Clocl_2474 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_2475 IPR002549 Transmembrane protein TqsA-like Clocl_2475 IPR014227 Putative transport protein YtvI-like Clocl_2476 IPR018204 Tryptophan synthase, alpha chain, active site Clocl_2476 IPR002028 Tryptophan synthase, alpha chain Clocl_2476 IPR013785 Aldolase-type TIM barrel Clocl_2476 IPR011060 Ribulose-phosphate binding barrel Clocl_2477 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA Clocl_2477 IPR018211 Alcohol dehydrogenase, iron-type, conserved site Clocl_2477 IPR039697 Iron-type alcohol dehydrogenase-like Clocl_2479 IPR004402 Purine nucleoside phosphorylase DeoD-type Clocl_2479 IPR018016 Nucleoside phosphorylase, conserved site Clocl_2479 IPR000845 Nucleoside phosphorylase domain Clocl_2479 IPR035994 Nucleoside phosphorylase superfamily Clocl_2480 IPR029056 Ribokinase-like Clocl_2480 IPR002139 Ribokinase/fructokinase Clocl_2480 IPR011611 Carbohydrate kinase PfkB Clocl_2480 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site Clocl_2482 IPR001851 ABC transporter, permease Clocl_2483 IPR001851 ABC transporter, permease Clocl_2484 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_2484 IPR003593 AAA+ ATPase domain Clocl_2484 IPR003439 ABC transporter-like Clocl_2484 IPR017871 ABC transporter, conserved site Clocl_2486 IPR036390 Winged helix DNA-binding domain superfamily Clocl_2486 IPR000524 Transcription regulator HTH, GntR Clocl_2486 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_2486 IPR011663 UbiC transcription regulator-associated Clocl_2486 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Clocl_2495 IPR001207 Transposase, mutator type Clocl_2498 IPR008979 Galactose-binding-like domain superfamily Clocl_2498 IPR022385 Rhs repeat-associated core Clocl_2498 IPR031325 RHS repeat Clocl_2498 IPR006530 YD repeat Clocl_2505 IPR022385 Rhs repeat-associated core Clocl_2505 IPR031325 RHS repeat Clocl_2505 IPR008979 Galactose-binding-like domain superfamily Clocl_2505 IPR006530 YD repeat Clocl_2506 IPR007696 DNA mismatch repair protein MutS, core Clocl_2506 IPR036187 DNA mismatch repair protein MutS, core domain superfamily Clocl_2506 IPR005747 Endonuclease MutS2 Clocl_2506 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_2506 IPR002625 Smr domain Clocl_2506 IPR036063 Smr domain superfamily Clocl_2506 IPR000432 DNA mismatch repair protein MutS, C-terminal Clocl_2508 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain Clocl_2510 IPR006059 Bacterial extracellular solute-binding protein Clocl_2513 IPR035906 MetI-like superfamily Clocl_2513 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Clocl_2514 IPR035906 MetI-like superfamily Clocl_2514 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Clocl_2516 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_2516 IPR014201 Sporulation stage IV, protein A Clocl_2517 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily Clocl_2517 IPR013328 6-phosphogluconate dehydrogenase, domain 2 Clocl_2517 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent Clocl_2517 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal Clocl_2517 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal Clocl_2517 IPR036291 NAD(P)-binding domain superfamily Clocl_2518 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY Clocl_2519 IPR005225 Small GTP-binding protein domain Clocl_2519 IPR031166 EngA-type guanine nucleotide-binding (G) domain Clocl_2519 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_2519 IPR015946 K homology domain-like, alpha/beta Clocl_2519 IPR032859 GTPase Der, C-terminal KH-domain-like Clocl_2519 IPR006073 GTP binding domain Clocl_2519 IPR016484 GTP-binding protein EngA Clocl_2520 IPR001940 Peptidase S1C Clocl_2520 IPR009003 Peptidase S1, PA clan Clocl_2520 IPR001478 PDZ domain Clocl_2520 IPR036034 PDZ superfamily Clocl_2520 IPR041489 PDZ domain 6 Clocl_2520 IPR011782 Peptidase S1C, Do Clocl_2521 IPR002677 Ribosomal protein L32p Clocl_2521 IPR011332 Zinc-binding ribosomal protein Clocl_2522 IPR003772 Large ribosomal RNA subunit accumulation protein YceD Clocl_2523 IPR004372 Acetate/propionate kinase Clocl_2523 IPR000890 Aliphatic acid kinase, short-chain Clocl_2523 IPR023865 Aliphatic acid kinase, short-chain, conserved site Clocl_2524 IPR042113 Phosphate acetyltransferase, domain 1 Clocl_2524 IPR002505 Phosphate acetyl/butaryl transferase Clocl_2524 IPR042112 Phosphate acetyltransferase, domain 2 Clocl_2524 IPR012147 Phosphate acetyl/butyryltransferase Clocl_2524 IPR004614 Phosphate acetyltransferase Clocl_2525 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain Clocl_2525 IPR042114 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 1 Clocl_2525 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site Clocl_2525 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 Clocl_2525 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like Clocl_2525 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic Clocl_2525 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E Clocl_2525 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit Clocl_2525 IPR018027 Asn/Gln amidotransferase Clocl_2526 IPR023631 Amidase signature domain Clocl_2526 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit Clocl_2526 IPR036928 Amidase signature (AS) superfamily Clocl_2526 IPR000120 Amidase Clocl_2526 IPR020556 Amidase, conserved site Clocl_2527 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C Clocl_2527 IPR003837 Glu-tRNAGln amidotransferase C subunit Clocl_2529 IPR013324 RNA polymerase sigma factor, region 3/4-like Clocl_2529 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_2529 IPR013325 RNA polymerase sigma factor, region 2 Clocl_2529 IPR039425 RNA polymerase sigma-70 like Clocl_2529 IPR007627 RNA polymerase sigma-70 region 2 Clocl_2529 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site Clocl_2529 IPR014294 RNA polymerase sigma-W, bacillaceae Clocl_2529 IPR014284 RNA polymerase sigma-70 like domain Clocl_2529 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 Clocl_2531 IPR001207 Transposase, mutator type Clocl_2532 IPR041663 DisA/LigA, helix-hairpin-helix motif Clocl_2532 IPR001357 BRCT domain Clocl_2532 IPR036420 BRCT domain superfamily Clocl_2532 IPR001679 NAD-dependent DNA ligase Clocl_2532 IPR004150 NAD-dependent DNA ligase, OB-fold Clocl_2532 IPR013840 NAD-dependent DNA ligase, N-terminal Clocl_2532 IPR012340 Nucleic acid-binding, OB-fold Clocl_2532 IPR010994 RuvA domain 2-like Clocl_2532 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type Clocl_2532 IPR013839 NAD-dependent DNA ligase, adenylation Clocl_2534 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain Clocl_2535 IPR023430 Peptidase HybD-like domain superfamily Clocl_2535 IPR005080 Peptidase A25, germination protease Clocl_2536 IPR002583 Ribosomal protein S20 Clocl_2536 IPR036510 Ribosomal protein S20 superfamily Clocl_2538 IPR022877 Protein of unknown funcion UPF0173 Clocl_2538 IPR001279 Metallo-beta-lactamase Clocl_2538 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Clocl_2539 IPR018392 LysM domain Clocl_2539 IPR036779 LysM domain superfamily Clocl_2539 IPR000064 Endopeptidase, NLPC/P60 domain Clocl_2539 IPR038765 Papain-like cysteine peptidase superfamily Clocl_2541 IPR001448 Small acid-soluble spore protein, alpha/beta-type Clocl_2541 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site Clocl_2541 IPR038300 SASP, alpha/beta-type superfamily Clocl_2542 IPR037509 Phosphomethylpyrimidine synthase Clocl_2542 IPR038521 ThiC/Bza superfamily Clocl_2542 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B Clocl_2543 IPR034291 Thiamine phosphate synthase Clocl_2543 IPR013785 Aldolase-type TIM barrel Clocl_2543 IPR036206 Thiamin phosphate synthase superfamily Clocl_2543 IPR022998 Thiamine phosphate synthase/TenI Clocl_2544 IPR001763 Rhodanese-like domain Clocl_2544 IPR036873 Rhodanese-like domain superfamily Clocl_2544 IPR000594 THIF-type NAD/FAD binding fold Clocl_2544 IPR035985 Ubiquitin-activating enzyme Clocl_2546 IPR013785 Aldolase-type TIM barrel Clocl_2546 IPR033983 Thiazole synthase ThiG Clocl_2546 IPR008867 Thiazole synthase Clocl_2547 IPR003749 Sulfur carrier ThiS/MoaD-like Clocl_2547 IPR008867 Thiazole synthase Clocl_2547 IPR033983 Thiazole synthase ThiG Clocl_2547 IPR013785 Aldolase-type TIM barrel Clocl_2547 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp Clocl_2547 IPR012675 Beta-grasp domain superfamily Clocl_2547 IPR010035 ThiS, thiamine-biosynthesis Clocl_2548 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_2548 IPR030393 EngB-type guanine nucleotide-binding (G) domain Clocl_2548 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC Clocl_2548 IPR006073 GTP binding domain Clocl_2553 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clocl_2553 IPR002102 Cellulosome anchoring protein, cohesin domain Clocl_2553 IPR001119 S-layer homology domain Clocl_2554 IPR018580 Uncharacterised protein family YfhO Clocl_2555 IPR001173 Glycosyltransferase 2-like Clocl_2555 IPR029044 Nucleotide-diphospho-sugar transferases Clocl_2557 IPR009057 Homeobox-like domain superfamily Clocl_2557 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Clocl_2557 IPR039538 BetI-type transcriptional repressor, C-terminal Clocl_2557 IPR001647 DNA-binding HTH domain, TetR-type Clocl_2557 IPR017757 Transcriptional repressor BetI Clocl_2557 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Clocl_2560 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Clocl_2560 IPR001789 Signal transduction response regulator, receiver domain Clocl_2560 IPR025944 Sigma-54 interaction domain, conserved site Clocl_2560 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_2560 IPR009057 Homeobox-like domain superfamily Clocl_2560 IPR011006 CheY-like superfamily Clocl_2560 IPR003593 AAA+ ATPase domain Clocl_2560 IPR002078 RNA polymerase sigma factor 54 interaction domain Clocl_2560 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Clocl_2561 IPR008532 NFACT, RNA-binding domain Clocl_2562 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Clocl_2562 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Clocl_2562 IPR015424 Pyridoxal phosphate-dependent transferase Clocl_2562 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site Clocl_2562 IPR004839 Aminotransferase, class I/classII Clocl_2563 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily Clocl_2563 IPR036371 Thiamin pyrophosphokinase, thiamin-binding domain superfamily Clocl_2563 IPR007373 Thiamin pyrophosphokinase, thiamin-binding domain Clocl_2563 IPR006282 Thiamin pyrophosphokinase Clocl_2563 IPR007371 Thiamin pyrophosphokinase, catalytic domain Clocl_2564 IPR013785 Aldolase-type TIM barrel Clocl_2564 IPR026019 Ribulose-phosphate 3-epimerase Clocl_2564 IPR000056 Ribulose-phosphate 3-epimerase-like Clocl_2564 IPR011060 Ribulose-phosphate binding barrel Clocl_2565 IPR031944 Ribosome biogenesis GTPase RsgA, N-terminal Clocl_2565 IPR010914 RsgA GTPase domain Clocl_2565 IPR004881 Ribosome biogenesis GTPase RsgA Clocl_2565 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_2565 IPR012340 Nucleic acid-binding, OB-fold Clocl_2565 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain Clocl_2566 IPR011009 Protein kinase-like domain superfamily Clocl_2566 IPR005543 PASTA domain Clocl_2566 IPR000719 Protein kinase domain Clocl_2566 IPR017441 Protein kinase, ATP binding site Clocl_2566 IPR008271 Serine/threonine-protein kinase, active site Clocl_2567 IPR001932 PPM-type phosphatase domain Clocl_2567 IPR015655 Protein phosphatase 2C family Clocl_2567 IPR036457 PPM-type phosphatase domain superfamily Clocl_2568 IPR013785 Aldolase-type TIM barrel Clocl_2568 IPR006638 Elp3/MiaB/NifB Clocl_2568 IPR040072 Methyltransferase (Class A) Clocl_2568 IPR027492 Dual-specificity RNA methyltransferase RlmN Clocl_2568 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr Clocl_2568 IPR007197 Radical SAM Clocl_2569 IPR004573 rRNA small subunit methyltransferase B Clocl_2569 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clocl_2569 IPR023267 RNA (C5-cytosine) methyltransferase Clocl_2569 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site Clocl_2569 IPR035926 NusB-like superfamily Clocl_2569 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type Clocl_2569 IPR006027 NusB/RsmB/TIM44 Clocl_2570 IPR007395 Putative neutral zinc metallopeptidase Clocl_2572 IPR005794 Methionyl-tRNA formyltransferase Clocl_2572 IPR005793 Formyl transferase, C-terminal Clocl_2572 IPR002376 Formyl transferase, N-terminal Clocl_2572 IPR036477 Formyl transferase, N-terminal domain superfamily Clocl_2572 IPR011034 Formyl transferase-like, C-terminal domain superfamily Clocl_2572 IPR001555 Phosphoribosylglycinamide formyltransferase, active site Clocl_2572 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain Clocl_2573 IPR023635 Peptide deformylase Clocl_2573 IPR036821 Peptide deformylase superfamily Clocl_2574 IPR006935 Helicase/UvrB, N-terminal Clocl_2574 IPR005259 Primosomal protein N' Clocl_2574 IPR001650 Helicase, C-terminal Clocl_2574 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain Clocl_2574 IPR041236 Primosomal protein N, C-terminal domain Clocl_2574 IPR014001 Helicase superfamily 1/2, ATP-binding domain Clocl_2574 IPR041222 Primosomal protein N', 3' DNA-binding domain Clocl_2574 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_2574 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily Clocl_2577 IPR024932 Flavin transferase ApbE Clocl_2577 IPR003374 ApbE-like superfamily Clocl_2577 IPR042159 Flavin-trafficking protein ApbE Clocl_2580 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel Clocl_2580 IPR002509 NodB homology domain Clocl_2582 IPR002765 Uncharacterised protein family UPF0145 Clocl_2582 IPR035439 UPF0145 domain superfamily Clocl_2585 IPR017932 Glutamine amidotransferase type 2 domain Clocl_2585 IPR029055 Nucleophile aminohydrolases, N-terminal Clocl_2585 IPR001962 Asparagine synthase Clocl_2585 IPR006426 Asparagine synthase, glutamine-hydrolyzing Clocl_2585 IPR033738 Asparagine synthase, N-terminal domain Clocl_2586 IPR001598 Transposase, IS30, conserved site Clocl_2586 IPR036397 Ribonuclease H superfamily Clocl_2586 IPR012337 Ribonuclease H-like superfamily Clocl_2586 IPR025246 Transposase IS30-like HTH domain Clocl_2586 IPR001584 Integrase, catalytic core Clocl_2588 IPR006584 Cellulose binding, type IV Clocl_2588 IPR005084 Carbohydrate binding module family 6 Clocl_2588 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Clocl_2588 IPR008979 Galactose-binding-like domain superfamily Clocl_2588 IPR013319 Glycoside hydrolase family 11/12 Clocl_2588 IPR033119 Glycoside hydrolase family 11, active site 2 Clocl_2588 IPR033123 Glycosyl hydrolases family 11 (GH11) domain Clocl_2588 IPR001137 Glycoside hydrolase family 11 Clocl_2588 IPR018208 Glycoside hydrolase family 11, active site 1 Clocl_2589 IPR010074 Phosphoribosylformylglycinamidine subunit PurL Clocl_2589 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain Clocl_2589 IPR010918 PurM-like, C-terminal domain Clocl_2589 IPR036676 PurM-like, C-terminal domain superfamily Clocl_2589 IPR016188 PurM-like, N-terminal domain Clocl_2589 IPR036921 PurM-like, N-terminal domain superfamily Clocl_2590 IPR036390 Winged helix DNA-binding domain superfamily Clocl_2590 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_2590 IPR000847 Transcription regulator HTH, LysR Clocl_2590 IPR005119 LysR, substrate-binding Clocl_2592 IPR042099 AMP-dependent synthetase-like superfamily Clocl_2592 IPR000873 AMP-dependent synthetase/ligase Clocl_2592 IPR020845 AMP-binding, conserved site Clocl_2592 IPR025110 AMP-binding enzyme, C-terminal domain Clocl_2593 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clocl_2593 IPR019805 Heat shock protein Hsp90, conserved site Clocl_2593 IPR001404 Heat shock protein Hsp90 family Clocl_2593 IPR020575 Heat shock protein Hsp90, N-terminal Clocl_2593 IPR020568 Ribosomal protein S5 domain 2-type fold Clocl_2594 IPR036390 Winged helix DNA-binding domain superfamily Clocl_2594 IPR002481 Ferric-uptake regulator Clocl_2594 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_2597 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_2600 IPR036005 Creatinase/aminopeptidase-like Clocl_2600 IPR000994 Peptidase M24 Clocl_2600 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 Clocl_2600 IPR001714 Peptidase M24, methionine aminopeptidase Clocl_2603 IPR001207 Transposase, mutator type Clocl_2605 IPR004101 Mur ligase, C-terminal Clocl_2605 IPR036565 Mur-like, catalytic domain superfamily Clocl_2605 IPR018109 Folylpolyglutamate synthetase, conserved site Clocl_2605 IPR001645 Folylpolyglutamate synthetase Clocl_2605 IPR036615 Mur ligase, C-terminal domain superfamily Clocl_2605 IPR013221 Mur ligase, central Clocl_2606 IPR011116 SecA Wing/Scaffold Clocl_2606 IPR036266 SecA, Wing/Scaffold superfamily Clocl_2606 IPR011115 SecA DEAD-like, N-terminal Clocl_2606 IPR000185 Protein translocase subunit SecA Clocl_2606 IPR004027 SEC-C motif Clocl_2606 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_2606 IPR014018 SecA motor DEAD Clocl_2606 IPR020937 SecA conserved site Clocl_2606 IPR036670 SecA, preprotein cross-linking domain superfamily Clocl_2606 IPR011130 SecA, preprotein cross-linking domain Clocl_2609 IPR000831 Trp repressor Clocl_2609 IPR010921 Trp repressor/replication initiator Clocl_2609 IPR038116 TrpR-like superfamily Clocl_2609 IPR013368 TrpR homologue YerC/YecD Clocl_2610 IPR032810 CCA-adding enzyme, C-terminal Clocl_2610 IPR002646 Poly A polymerase, head domain Clocl_2610 IPR023068 CCA-adding enzyme, firmicutes Clocl_2610 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Clocl_2618 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_2618 IPR006474 Helicase Cas3, CRISPR-associated, core Clocl_2618 IPR006483 CRISPR-associated Cas3-type HD domain Clocl_2618 IPR014001 Helicase superfamily 1/2, ATP-binding domain Clocl_2618 IPR011545 DEAD/DEAH box helicase domain Clocl_2618 IPR038257 CRISPR-associated Cas3-type HD domain superfamily Clocl_2618 IPR041372 Cas3, C-terminal Clocl_2618 IPR035011 CRISPR-associated endonuclease/helicase Cas3 Clocl_2618 IPR001650 Helicase, C-terminal Clocl_2622 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal Clocl_2622 IPR003346 Transposase, IS116/IS110/IS902 Clocl_2625 IPR014284 RNA polymerase sigma-70 like domain Clocl_2625 IPR013324 RNA polymerase sigma factor, region 3/4-like Clocl_2625 IPR000943 RNA polymerase sigma-70 Clocl_2625 IPR012845 RNA polymerase sigma factor, FliA/WhiG Clocl_2625 IPR013325 RNA polymerase sigma factor, region 2 Clocl_2625 IPR007630 RNA polymerase sigma-70 region 4 Clocl_2625 IPR007624 RNA polymerase sigma-70 region 3 Clocl_2625 IPR007627 RNA polymerase sigma-70 region 2 Clocl_2626 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) Clocl_2626 IPR013785 Aldolase-type TIM barrel Clocl_2626 IPR011060 Ribulose-phosphate binding barrel Clocl_2627 IPR011060 Ribulose-phosphate binding barrel Clocl_2627 IPR001468 Indole-3-glycerol phosphate synthase, conserved site Clocl_2627 IPR013798 Indole-3-glycerol phosphate synthase Clocl_2627 IPR013785 Aldolase-type TIM barrel Clocl_2628 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Clocl_2628 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Clocl_2628 IPR000312 Glycosyl transferase, family 3 Clocl_2628 IPR005940 Anthranilate phosphoribosyl transferase Clocl_2628 IPR017459 Glycosyl transferase family 3, N-terminal domain Clocl_2629 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Clocl_2629 IPR005940 Anthranilate phosphoribosyl transferase Clocl_2629 IPR029062 Class I glutamine amidotransferase-like Clocl_2629 IPR017926 Glutamine amidotransferase Clocl_2629 IPR000312 Glycosyl transferase, family 3 Clocl_2629 IPR017459 Glycosyl transferase family 3, N-terminal domain Clocl_2629 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Clocl_2629 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain Clocl_2630 IPR005801 ADC synthase Clocl_2630 IPR015890 Chorismate-utilising enzyme, C-terminal Clocl_2630 IPR005256 Anthranilate synthase component I, PabB-like Clocl_2630 IPR006805 Anthranilate synthase component I, N-terminal Clocl_2630 IPR019999 Anthranilate synthase component I-like Clocl_2631 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site Clocl_2631 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_2631 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily Clocl_2631 IPR028619 ATP-dependent RNA helicase DbpA Clocl_2631 IPR014014 RNA helicase, DEAD-box type, Q motif Clocl_2631 IPR001650 Helicase, C-terminal Clocl_2631 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain Clocl_2631 IPR014001 Helicase superfamily 1/2, ATP-binding domain Clocl_2631 IPR011545 DEAD/DEAH box helicase domain Clocl_2632 IPR001598 Transposase, IS30, conserved site Clocl_2632 IPR036397 Ribonuclease H superfamily Clocl_2632 IPR012337 Ribonuclease H-like superfamily Clocl_2632 IPR025246 Transposase IS30-like HTH domain Clocl_2632 IPR001584 Integrase, catalytic core Clocl_2634 IPR023192 TGS-like domain superfamily Clocl_2634 IPR012676 TGS-like Clocl_2634 IPR041706 YchF, N-terminal Clocl_2634 IPR013029 YchF, C-terminal domain Clocl_2634 IPR004095 TGS Clocl_2634 IPR031167 OBG-type guanine nucleotide-binding (G) domain Clocl_2634 IPR006073 GTP binding domain Clocl_2634 IPR012675 Beta-grasp domain superfamily Clocl_2634 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 Clocl_2634 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_2635 IPR039315 Chemotaxis protein CheW Clocl_2635 IPR036061 CheW-like domain superfamily Clocl_2635 IPR002545 CheW-like domain Clocl_2636 IPR041071 DAHP synthase ferredoxin-like domain Clocl_2636 IPR006268 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 Clocl_2636 IPR013785 Aldolase-type TIM barrel Clocl_2636 IPR006218 DAHP synthetase I/KDSA Clocl_2637 IPR000160 GGDEF domain Clocl_2637 IPR029787 Nucleotide cyclase Clocl_2637 IPR029016 GAF-like domain superfamily Clocl_2637 IPR003018 GAF domain Clocl_2639 IPR019802 Glycoside hydrolase, family 4, conserved site Clocl_2639 IPR001088 Glycoside hydrolase, family 4 Clocl_2639 IPR022616 Glycosyl hydrolase, family 4, C-terminal Clocl_2639 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal Clocl_2639 IPR036291 NAD(P)-binding domain superfamily Clocl_2640 IPR011006 CheY-like superfamily Clocl_2640 IPR001789 Signal transduction response regulator, receiver domain Clocl_2640 IPR029787 Nucleotide cyclase Clocl_2640 IPR000160 GGDEF domain Clocl_2641 IPR000620 EamA domain Clocl_2644 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_2644 IPR001977 Dephospho-CoA kinase Clocl_2645 IPR036397 Ribonuclease H superfamily Clocl_2645 IPR012337 Ribonuclease H-like superfamily Clocl_2645 IPR029060 PIN-like domain superfamily Clocl_2645 IPR002298 DNA polymerase A Clocl_2645 IPR018320 DNA polymerase 1 Clocl_2645 IPR020045 DNA polymerase I-like, H3TH domain Clocl_2645 IPR001098 DNA-directed DNA polymerase, family A, palm domain Clocl_2645 IPR019760 DNA-directed DNA polymerase, family A, conserved site Clocl_2645 IPR036279 5'-3' exonuclease, C-terminal domain superfamily Clocl_2645 IPR002421 5'-3' exonuclease, N-terminal Clocl_2645 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal Clocl_2645 IPR002562 3'-5' exonuclease domain Clocl_2645 IPR008918 Helix-hairpin-helix motif, class 2 Clocl_2648 IPR003346 Transposase, IS116/IS110/IS902 Clocl_2648 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal Clocl_2649 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site Clocl_2649 IPR007627 RNA polymerase sigma-70 region 2 Clocl_2649 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 Clocl_2649 IPR014286 RNA polymerase sigma-70 RpoE type Clocl_2649 IPR013325 RNA polymerase sigma factor, region 2 Clocl_2649 IPR013324 RNA polymerase sigma factor, region 3/4-like Clocl_2649 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_2649 IPR039425 RNA polymerase sigma-70 like Clocl_2649 IPR014284 RNA polymerase sigma-70 like domain Clocl_2651 IPR004390 Signal-recognition particle receptor FtsY Clocl_2651 IPR003593 AAA+ ATPase domain Clocl_2651 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_2651 IPR013822 Signal recognition particle SRP54, helical bundle Clocl_2651 IPR036225 SRP/SRP receptor, N-terminal Clocl_2651 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain Clocl_2651 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily Clocl_2652 IPR024704 Structural maintenance of chromosomes protein Clocl_2652 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_2652 IPR010935 SMCs flexible hinge Clocl_2652 IPR003395 RecF/RecN/SMC, N-terminal Clocl_2652 IPR011890 Structural maintenance of chromosomes protein, prokaryotic Clocl_2652 IPR036277 SMCs flexible hinge superfamily Clocl_2653 IPR005255 PdxA family Clocl_2655 IPR003593 AAA+ ATPase domain Clocl_2655 IPR003439 ABC transporter-like Clocl_2655 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_2655 IPR017871 ABC transporter, conserved site Clocl_2657 IPR036259 MFS transporter superfamily Clocl_2657 IPR004751 Drug antiporter protein Clocl_2657 IPR011701 Major facilitator superfamily Clocl_2657 IPR020846 Major facilitator superfamily domain Clocl_2658 IPR020845 AMP-binding, conserved site Clocl_2658 IPR025110 AMP-binding enzyme, C-terminal domain Clocl_2658 IPR009081 Phosphopantetheine binding ACP domain Clocl_2658 IPR020806 Polyketide synthase, phosphopantetheine-binding domain Clocl_2658 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Clocl_2658 IPR032821 Ketoacyl-synthetase, C-terminal extension Clocl_2658 IPR014030 Beta-ketoacyl synthase, N-terminal Clocl_2658 IPR014031 Beta-ketoacyl synthase, C-terminal Clocl_2658 IPR018201 Beta-ketoacyl synthase, active site Clocl_2658 IPR001242 Condensation domain Clocl_2658 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Clocl_2658 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Clocl_2658 IPR016039 Thiolase-like Clocl_2658 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Clocl_2658 IPR042099 AMP-dependent synthetase-like superfamily Clocl_2658 IPR000873 AMP-dependent synthetase/ligase Clocl_2658 IPR006162 Phosphopantetheine attachment site Clocl_2658 IPR015424 Pyridoxal phosphate-dependent transferase Clocl_2658 IPR036736 ACP-like superfamily Clocl_2658 IPR010071 Amino acid adenylation domain Clocl_2658 IPR005814 Aminotransferase class-III Clocl_2659 IPR042099 AMP-dependent synthetase-like superfamily Clocl_2659 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Clocl_2659 IPR001242 Condensation domain Clocl_2659 IPR010060 Non-ribosomal peptide synthase Clocl_2659 IPR020802 Polyketide synthase, thioesterase domain Clocl_2659 IPR009081 Phosphopantetheine binding ACP domain Clocl_2659 IPR006162 Phosphopantetheine attachment site Clocl_2659 IPR025110 AMP-binding enzyme, C-terminal domain Clocl_2659 IPR036736 ACP-like superfamily Clocl_2659 IPR029058 Alpha/Beta hydrolase fold Clocl_2659 IPR010071 Amino acid adenylation domain Clocl_2659 IPR000873 AMP-dependent synthetase/ligase Clocl_2659 IPR001031 Thioesterase Clocl_2659 IPR020845 AMP-binding, conserved site Clocl_2660 IPR036736 ACP-like superfamily Clocl_2660 IPR005814 Aminotransferase class-III Clocl_2660 IPR025110 AMP-binding enzyme, C-terminal domain Clocl_2660 IPR018201 Beta-ketoacyl synthase, active site Clocl_2660 IPR001242 Condensation domain Clocl_2660 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Clocl_2660 IPR042099 AMP-dependent synthetase-like superfamily Clocl_2660 IPR000873 AMP-dependent synthetase/ligase Clocl_2660 IPR020845 AMP-binding, conserved site Clocl_2660 IPR016039 Thiolase-like Clocl_2660 IPR014031 Beta-ketoacyl synthase, C-terminal Clocl_2660 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Clocl_2660 IPR015424 Pyridoxal phosphate-dependent transferase Clocl_2660 IPR006162 Phosphopantetheine attachment site Clocl_2660 IPR009081 Phosphopantetheine binding ACP domain Clocl_2660 IPR020806 Polyketide synthase, phosphopantetheine-binding domain Clocl_2660 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Clocl_2660 IPR032821 Ketoacyl-synthetase, C-terminal extension Clocl_2660 IPR014030 Beta-ketoacyl synthase, N-terminal Clocl_2660 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Clocl_2660 IPR010071 Amino acid adenylation domain Clocl_2661 IPR036736 ACP-like superfamily Clocl_2661 IPR025110 AMP-binding enzyme, C-terminal domain Clocl_2661 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Clocl_2661 IPR020845 AMP-binding, conserved site Clocl_2661 IPR032821 Ketoacyl-synthetase, C-terminal extension Clocl_2661 IPR010071 Amino acid adenylation domain Clocl_2661 IPR000873 AMP-dependent synthetase/ligase Clocl_2661 IPR005814 Aminotransferase class-III Clocl_2661 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Clocl_2661 IPR018201 Beta-ketoacyl synthase, active site Clocl_2661 IPR014031 Beta-ketoacyl synthase, C-terminal Clocl_2661 IPR014030 Beta-ketoacyl synthase, N-terminal Clocl_2661 IPR009081 Phosphopantetheine binding ACP domain Clocl_2661 IPR020806 Polyketide synthase, phosphopantetheine-binding domain Clocl_2661 IPR006162 Phosphopantetheine attachment site Clocl_2661 IPR015424 Pyridoxal phosphate-dependent transferase Clocl_2661 IPR042099 AMP-dependent synthetase-like superfamily Clocl_2661 IPR001242 Condensation domain Clocl_2661 IPR016039 Thiolase-like Clocl_2661 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Clocl_2661 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Clocl_2663 IPR020615 Thiolase, acyl-enzyme intermediate active site Clocl_2663 IPR016039 Thiolase-like Clocl_2663 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clocl_2663 IPR006162 Phosphopantetheine attachment site Clocl_2663 IPR009081 Phosphopantetheine binding ACP domain Clocl_2663 IPR013217 Methyltransferase type 12 Clocl_2663 IPR042104 Polyketide synthase, dehydratase domain superfamily Clocl_2663 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Clocl_2663 IPR032821 Ketoacyl-synthetase, C-terminal extension Clocl_2663 IPR036291 NAD(P)-binding domain superfamily Clocl_2663 IPR036736 ACP-like superfamily Clocl_2663 IPR018201 Beta-ketoacyl synthase, active site Clocl_2663 IPR020806 Polyketide synthase, phosphopantetheine-binding domain Clocl_2663 IPR014031 Beta-ketoacyl synthase, C-terminal Clocl_2663 IPR014030 Beta-ketoacyl synthase, N-terminal Clocl_2663 IPR020807 Polyketide synthase, dehydratase domain Clocl_2663 IPR013968 Polyketide synthase, ketoreductase domain Clocl_2664 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Clocl_2664 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type Clocl_2664 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Clocl_2664 IPR014043 Acyl transferase Clocl_2664 IPR001227 Acyl transferase domain superfamily Clocl_2665 IPR009081 Phosphopantetheine binding ACP domain Clocl_2665 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Clocl_2665 IPR010071 Amino acid adenylation domain Clocl_2665 IPR036736 ACP-like superfamily Clocl_2665 IPR005814 Aminotransferase class-III Clocl_2665 IPR025110 AMP-binding enzyme, C-terminal domain Clocl_2665 IPR020845 AMP-binding, conserved site Clocl_2665 IPR000873 AMP-dependent synthetase/ligase Clocl_2665 IPR042099 AMP-dependent synthetase-like superfamily Clocl_2665 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Clocl_2665 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Clocl_2665 IPR018201 Beta-ketoacyl synthase, active site Clocl_2665 IPR014030 Beta-ketoacyl synthase, N-terminal Clocl_2665 IPR032821 Ketoacyl-synthetase, C-terminal extension Clocl_2665 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Clocl_2665 IPR020806 Polyketide synthase, phosphopantetheine-binding domain Clocl_2665 IPR006162 Phosphopantetheine attachment site Clocl_2665 IPR015424 Pyridoxal phosphate-dependent transferase Clocl_2665 IPR001242 Condensation domain Clocl_2665 IPR014031 Beta-ketoacyl synthase, C-terminal Clocl_2665 IPR016039 Thiolase-like Clocl_2668 IPR008979 Galactose-binding-like domain superfamily Clocl_2668 IPR022385 Rhs repeat-associated core Clocl_2668 IPR031325 RHS repeat Clocl_2668 IPR006530 YD repeat Clocl_2680 IPR002686 Transposase IS200-like Clocl_2680 IPR036515 Transposase IS200-like superfamily Clocl_2683 IPR008878 Transposase IS66, Orf2 Clocl_2684 IPR002514 Transposase IS3/IS911family Clocl_2684 IPR009057 Homeobox-like domain superfamily Clocl_2687 IPR024474 Zinc-finger binding domain of transposase IS66 Clocl_2687 IPR004291 Transposase, IS66 Clocl_2687 IPR039552 Transposase IS66, C-terminal Clocl_2687 IPR024463 Transposase TnpC, homeodomain Clocl_2688 IPR008878 Transposase IS66, Orf2 Clocl_2691 IPR022385 Rhs repeat-associated core Clocl_2691 IPR031325 RHS repeat Clocl_2691 IPR006530 YD repeat Clocl_2691 IPR008979 Galactose-binding-like domain superfamily Clocl_2695 IPR024474 Zinc-finger binding domain of transposase IS66 Clocl_2695 IPR024463 Transposase TnpC, homeodomain Clocl_2695 IPR004291 Transposase, IS66 Clocl_2695 IPR039552 Transposase IS66, C-terminal Clocl_2696 IPR008878 Transposase IS66, Orf2 Clocl_2698 IPR022385 Rhs repeat-associated core Clocl_2698 IPR006530 YD repeat Clocl_2698 IPR008979 Galactose-binding-like domain superfamily Clocl_2698 IPR031325 RHS repeat Clocl_2699 IPR001207 Transposase, mutator type Clocl_2705 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Clocl_2705 IPR035906 MetI-like superfamily Clocl_2706 IPR003439 ABC transporter-like Clocl_2706 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_2706 IPR003593 AAA+ ATPase domain Clocl_2710 IPR038071 UROD/MetE-like superfamily Clocl_2710 IPR006361 Uroporphyrinogen decarboxylase HemE Clocl_2710 IPR000257 Uroporphyrinogen decarboxylase (URO-D) Clocl_2711 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Clocl_2711 IPR006158 Cobalamin (vitamin B12)-binding domain Clocl_2711 IPR036724 Cobalamin-binding domain superfamily Clocl_2711 IPR012741 Methyltransferase cognate corrinoid protein Clocl_2711 IPR036594 Methionine synthase domain Clocl_2719 IPR029061 Thiamin diphosphate-binding fold Clocl_2719 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding Clocl_2720 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II Clocl_2720 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II Clocl_2720 IPR029061 Thiamin diphosphate-binding fold Clocl_2720 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal Clocl_2721 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clocl_2721 IPR011898 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate Clocl_2721 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clocl_2722 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain Clocl_2722 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain Clocl_2722 IPR011894 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate Clocl_2723 IPR015424 Pyridoxal phosphate-dependent transferase Clocl_2723 IPR004839 Aminotransferase, class I/classII Clocl_2723 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Clocl_2723 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Clocl_2724 IPR028154 AMP-dependent ligase, C-terminal Clocl_2724 IPR000873 AMP-dependent synthetase/ligase Clocl_2724 IPR042099 AMP-dependent synthetase-like superfamily Clocl_2724 IPR011880 Phenylacetate-CoA ligase Clocl_2725 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Clocl_2725 IPR035906 MetI-like superfamily Clocl_2726 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal Clocl_2726 IPR017871 ABC transporter, conserved site Clocl_2726 IPR003593 AAA+ ATPase domain Clocl_2726 IPR026253 Methionine import ATP-binding protein MetN Clocl_2726 IPR003439 ABC transporter-like Clocl_2726 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_2726 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain Clocl_2726 IPR018449 NIL domain Clocl_2727 IPR004872 Lipoprotein NlpA family Clocl_2729 IPR006361 Uroporphyrinogen decarboxylase HemE Clocl_2729 IPR038071 UROD/MetE-like superfamily Clocl_2729 IPR000257 Uroporphyrinogen decarboxylase (URO-D) Clocl_2730 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Clocl_2730 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Clocl_2730 IPR015424 Pyridoxal phosphate-dependent transferase Clocl_2730 IPR027619 Putative C-S lyase Clocl_2730 IPR004839 Aminotransferase, class I/classII Clocl_2731 IPR005232 Pyridinium-3,5-bisthiocarboxylic acid mononucleotide synthase LarE Clocl_2731 IPR022310 NAD/GMP synthase Clocl_2731 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clocl_2732 IPR036390 Winged helix DNA-binding domain superfamily Clocl_2732 IPR030489 Transcription regulator Rrf2-type, conserved site Clocl_2732 IPR000944 Transcription regulator Rrf2-type Clocl_2732 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_2738 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain Clocl_2738 IPR000551 MerR-type HTH domain Clocl_2738 IPR009061 Putative DNA-binding domain superfamily Clocl_2738 IPR012925 TipAS antibiotic-recognition domain Clocl_2742 IPR001598 Transposase, IS30, conserved site Clocl_2742 IPR036397 Ribonuclease H superfamily Clocl_2742 IPR012337 Ribonuclease H-like superfamily Clocl_2742 IPR025246 Transposase IS30-like HTH domain Clocl_2742 IPR001584 Integrase, catalytic core Clocl_2743 IPR001207 Transposase, mutator type Clocl_2744 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal Clocl_2744 IPR003346 Transposase, IS116/IS110/IS902 Clocl_2745 IPR003305 Carbohydrate-binding, CenC-like Clocl_2745 IPR010502 Carbohydrate-binding domain, family 9 Clocl_2745 IPR001119 S-layer homology domain Clocl_2745 IPR017853 Glycoside hydrolase superfamily Clocl_2745 IPR031158 Glycosyl hydrolases family 10, active site Clocl_2745 IPR008979 Galactose-binding-like domain superfamily Clocl_2745 IPR001000 Glycoside hydrolase family 10 domain Clocl_2746 IPR002105 Dockerin type I repeat Clocl_2746 IPR029058 Alpha/Beta hydrolase fold Clocl_2746 IPR006584 Cellulose binding, type IV Clocl_2746 IPR005084 Carbohydrate binding module family 6 Clocl_2746 IPR016134 Dockerin domain Clocl_2746 IPR017853 Glycoside hydrolase superfamily Clocl_2746 IPR036439 Dockerin domain superfamily Clocl_2746 IPR000801 Putative esterase Clocl_2746 IPR008979 Galactose-binding-like domain superfamily Clocl_2746 IPR001000 Glycoside hydrolase family 10 domain Clocl_2746 IPR031158 Glycosyl hydrolases family 10, active site Clocl_2746 IPR018247 EF-Hand 1, calcium-binding site Clocl_2747 IPR011658 PA14 domain Clocl_2747 IPR024449 Anti-sigma factor RsgI, N-terminal Clocl_2747 IPR037524 PA14/GLEYA domain Clocl_2748 IPR014244 RNA polymerase sigma-I type Clocl_2748 IPR007627 RNA polymerase sigma-70 region 2 Clocl_2748 IPR013325 RNA polymerase sigma factor, region 2 Clocl_2750 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site Clocl_2750 IPR011095 D-alanine--D-alanine ligase, C-terminal Clocl_2750 IPR005905 D-alanine--D-alanine ligase Clocl_2750 IPR016185 Pre-ATP-grasp domain superfamily Clocl_2750 IPR013815 ATP-grasp fold, subdomain 1 Clocl_2750 IPR011127 D-alanine--D-alanine ligase, N-terminal domain Clocl_2750 IPR011761 ATP-grasp fold Clocl_2753 IPR023090 UPF0702, alpha/beta domain superfamily Clocl_2753 IPR007353 Protein of unknown function DUF421 Clocl_2755 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily Clocl_2755 IPR040442 Pyruvate kinase-like domain superfamily Clocl_2755 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding Clocl_2755 IPR036637 Phosphohistidine domain superfamily Clocl_2755 IPR023151 PEP-utilising enzyme, conserved site Clocl_2755 IPR010121 Pyruvate, phosphate dikinase Clocl_2755 IPR018274 PEP-utilising enzyme, active site Clocl_2755 IPR008279 PEP-utilising enzyme, mobile domain Clocl_2755 IPR013815 ATP-grasp fold, subdomain 1 Clocl_2755 IPR000121 PEP-utilising enzyme, C-terminal Clocl_2756 IPR027031 Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2 Clocl_2756 IPR036621 Anticodon-binding domain superfamily Clocl_2756 IPR004154 Anticodon-binding Clocl_2756 IPR006195 Aminoacyl-tRNA synthetase, class II Clocl_2756 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) Clocl_2756 IPR033731 Glycyl-tRNA synthetase-like core domain Clocl_2756 IPR002315 Glycyl-tRNA synthetase Clocl_2756 IPR022961 Glycine-tRNA ligase, bacterial Clocl_2757 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal Clocl_2757 IPR035929 CoaB-like superfamily Clocl_2757 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC Clocl_2757 IPR036551 Flavin prenyltransferase-like Clocl_2757 IPR003382 Flavoprotein Clocl_2758 IPR006110 RNA polymerase, subunit omega/K/RPB6 Clocl_2758 IPR003716 DNA-directed RNA polymerase, omega subunit Clocl_2758 IPR012293 RNA polymerase subunit, RPB6/omega Clocl_2758 IPR036161 RPB6/omega subunit-like superfamily Clocl_2759 IPR008145 Guanylate kinase/L-type calcium channel beta subunit Clocl_2759 IPR008144 Guanylate kinase-like domain Clocl_2759 IPR017665 Guanylate kinase Clocl_2759 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_2759 IPR020590 Guanylate kinase, conserved site Clocl_2760 IPR007169 Extracellular matrix regulatory protein A Clocl_2761 IPR013527 YicC-like, N-terminal Clocl_2761 IPR013551 Domain of unknown function DUF1732 Clocl_2761 IPR005229 Conserved hypothetical protein CHP00255 Clocl_2763 IPR008263 Glycoside hydrolase, family 16, active site Clocl_2763 IPR000757 Glycoside hydrolase family 16 Clocl_2763 IPR018247 EF-Hand 1, calcium-binding site Clocl_2763 IPR036439 Dockerin domain superfamily Clocl_2763 IPR016134 Dockerin domain Clocl_2763 IPR002105 Dockerin type I repeat Clocl_2763 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Clocl_2763 IPR008264 Beta-glucanase Clocl_2764 IPR011006 CheY-like superfamily Clocl_2764 IPR001789 Signal transduction response regulator, receiver domain Clocl_2765 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Clocl_2765 IPR006700 Ribosomal RNA small subunit methyltransferase E Clocl_2765 IPR029028 Alpha/beta knot methyltransferases Clocl_2765 IPR015947 PUA-like superfamily Clocl_2766 IPR004498 Ribosomal protein L11 methyltransferase Clocl_2766 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clocl_2767 IPR008971 HSP40/DnaJ peptide-binding Clocl_2767 IPR001305 Heat shock protein DnaJ, cysteine-rich domain Clocl_2767 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily Clocl_2767 IPR036869 Chaperone J-domain superfamily Clocl_2767 IPR002939 Chaperone DnaJ, C-terminal Clocl_2767 IPR018253 DnaJ domain, conserved site Clocl_2767 IPR001623 DnaJ domain Clocl_2767 IPR012724 Chaperone DnaJ Clocl_2768 IPR012725 Chaperone DnaK Clocl_2768 IPR018181 Heat shock protein 70, conserved site Clocl_2768 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Clocl_2768 IPR013126 Heat shock protein 70 family Clocl_2768 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Clocl_2769 IPR000740 GrpE nucleotide exchange factor Clocl_2769 IPR013805 GrpE nucleotide exchange factor, coiled-coil Clocl_2769 IPR009012 GrpE nucleotide exchange factor, head Clocl_2770 IPR029016 GAF-like domain superfamily Clocl_2770 IPR002571 Heat-inducible transcription repressor HrcA Clocl_2770 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal Clocl_2770 IPR036390 Winged helix DNA-binding domain superfamily Clocl_2770 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily Clocl_2770 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_2771 IPR034505 Anaerobic coproporphyrinogen-III oxidase Clocl_2771 IPR007197 Radical SAM Clocl_2771 IPR004559 Heme chaperone HemW-like Clocl_2771 IPR010723 HemN, C-terminal Clocl_2771 IPR023404 Radical SAM, alpha/beta horseshoe Clocl_2771 IPR006638 Elp3/MiaB/NifB Clocl_2772 IPR005225 Small GTP-binding protein domain Clocl_2772 IPR009000 Translation protein, beta-barrel domain superfamily Clocl_2772 IPR000795 Transcription factor, GTP-binding domain Clocl_2772 IPR035654 Elongation factor 4, domain IV Clocl_2772 IPR013842 GTP-binding protein LepA, C-terminal Clocl_2772 IPR038363 LepA, C-terminal domain superfamily Clocl_2772 IPR031157 Tr-type G domain, conserved site Clocl_2772 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_2772 IPR004161 Translation elongation factor EFTu-like, domain 2 Clocl_2772 IPR000640 Elongation factor EFG, domain V-like Clocl_2772 IPR035647 EF-G domain III/V-like Clocl_2772 IPR006297 Elongation factor 4 Clocl_2773 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily Clocl_2773 IPR030395 Glycerophosphodiester phosphodiesterase domain Clocl_2778 IPR019756 Peptidase S26A, signal peptidase I, serine active site Clocl_2778 IPR019533 Peptidase S26 Clocl_2778 IPR036286 LexA/Signal peptidase-like superfamily Clocl_2778 IPR019757 Peptidase S26A, signal peptidase I, lysine active site Clocl_2778 IPR019758 Peptidase S26A, signal peptidase I, conserved site Clocl_2778 IPR000223 Peptidase S26A, signal peptidase I Clocl_2779 IPR004115 GAD-like domain superfamily Clocl_2779 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb Clocl_2779 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type Clocl_2779 IPR006195 Aminoacyl-tRNA synthetase, class II Clocl_2779 IPR029351 GAD domain Clocl_2779 IPR012340 Nucleic acid-binding, OB-fold Clocl_2779 IPR004524 Aspartate-tRNA ligase, type 1 Clocl_2779 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) Clocl_2780 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain Clocl_2780 IPR033656 Histidyl-anticodon-binding Clocl_2780 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit Clocl_2780 IPR006195 Aminoacyl-tRNA synthetase, class II Clocl_2780 IPR004154 Anticodon-binding Clocl_2780 IPR036621 Anticodon-binding domain superfamily Clocl_2780 IPR015807 Histidine-tRNA ligase Clocl_2781 IPR007197 Radical SAM Clocl_2781 IPR023995 Oxygen-independent coproporphyrinogen-III oxidase-like protein HemZ Clocl_2781 IPR006638 Elp3/MiaB/NifB Clocl_2781 IPR034505 Anaerobic coproporphyrinogen-III oxidase Clocl_2781 IPR023404 Radical SAM, alpha/beta horseshoe Clocl_2782 IPR001279 Metallo-beta-lactamase Clocl_2782 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Clocl_2783 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily Clocl_2783 IPR003732 D-aminoacyl-tRNA deacylase DTD Clocl_2784 IPR003607 HD/PDEase domain Clocl_2784 IPR012675 Beta-grasp domain superfamily Clocl_2784 IPR002912 ACT domain Clocl_2784 IPR007685 RelA/SpoT Clocl_2784 IPR004095 TGS Clocl_2784 IPR004811 RelA/SpoT family Clocl_2784 IPR012676 TGS-like Clocl_2784 IPR033655 RelA, TGS domain Clocl_2785 IPR005764 Adenine phosphoribosyl transferase Clocl_2785 IPR000836 Phosphoribosyltransferase domain Clocl_2785 IPR029057 Phosphoribosyltransferase-like Clocl_2786 IPR041122 RecJ, OB domain Clocl_2786 IPR018779 Single-stranded-DNA-specific exonuclease RecJ, C-terminal Clocl_2786 IPR004610 Bacterial RecJ exonuclease Clocl_2786 IPR003156 DHHA1 domain Clocl_2786 IPR038763 DHH phosphoesterase superfamily Clocl_2786 IPR001667 DDH domain Clocl_2788 IPR036515 Transposase IS200-like superfamily Clocl_2788 IPR002686 Transposase IS200-like Clocl_2790 IPR038380 Ribosomal protein S21 superfamily Clocl_2790 IPR001911 Ribosomal protein S21 Clocl_2790 IPR018278 Ribosomal protein S21, conserved site Clocl_2791 IPR001650 Helicase, C-terminal Clocl_2791 IPR000330 SNF2-related, N-terminal domain Clocl_2791 IPR038718 SNF2-like, N-terminal domain superfamily Clocl_2791 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_2791 IPR014001 Helicase superfamily 1/2, ATP-binding domain Clocl_2791 IPR022138 Helicase SWF/SNF-related Clocl_2792 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase Clocl_2792 IPR003362 Bacterial sugar transferase Clocl_2797 IPR024449 Anti-sigma factor RsgI, N-terminal Clocl_2798 IPR007627 RNA polymerase sigma-70 region 2 Clocl_2798 IPR014244 RNA polymerase sigma-I type Clocl_2798 IPR013325 RNA polymerase sigma factor, region 2 Clocl_2814 IPR001296 Glycosyl transferase, family 1 Clocl_2814 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Clocl_2815 IPR001173 Glycosyltransferase 2-like Clocl_2815 IPR029044 Nucleotide-diphospho-sugar transferases Clocl_2817 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily Clocl_2817 IPR036291 NAD(P)-binding domain superfamily Clocl_2817 IPR017476 UDP-glucose/GDP-mannose dehydrogenase Clocl_2817 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal Clocl_2817 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Clocl_2817 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation Clocl_2817 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal Clocl_2817 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type Clocl_2818 IPR025584 Carbohydrate-binding domain-containing protein Cthe_2159 Clocl_2822 IPR003362 Bacterial sugar transferase Clocl_2822 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase Clocl_2823 IPR001207 Transposase, mutator type Clocl_2826 IPR029044 Nucleotide-diphospho-sugar transferases Clocl_2826 IPR001173 Glycosyltransferase 2-like Clocl_2828 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Clocl_2828 IPR001296 Glycosyl transferase, family 1 Clocl_2830 IPR029044 Nucleotide-diphospho-sugar transferases Clocl_2830 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form Clocl_2830 IPR005835 Nucleotidyl transferase domain Clocl_2831 IPR005913 dTDP-4-dehydrorhamnose reductase family Clocl_2831 IPR036291 NAD(P)-binding domain superfamily Clocl_2831 IPR029903 RmlD-like substrate binding domain Clocl_2832 IPR011051 RmlC-like cupin domain superfamily Clocl_2832 IPR014710 RmlC-like jelly roll fold Clocl_2832 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related Clocl_2833 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_2833 IPR005702 Exopolysaccharide synthesis protein Clocl_2833 IPR025669 AAA domain Clocl_2835 IPR016195 Polymerase/histidinol phosphatase-like Clocl_2835 IPR016667 Capsular polysaccharide synthesis, CpsB/CapC Clocl_2836 IPR001119 S-layer homology domain Clocl_2836 IPR002102 Cellulosome anchoring protein, cohesin domain Clocl_2836 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clocl_2837 IPR019808 Histidine triad, conserved site Clocl_2837 IPR036265 HIT-like superfamily Clocl_2837 IPR011146 HIT-like domain Clocl_2837 IPR001310 Histidine triad (HIT) protein Clocl_2838 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain Clocl_2838 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal Clocl_2838 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria Clocl_2838 IPR003156 DHHA1 domain Clocl_2838 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily Clocl_2838 IPR012947 Threonyl/alanyl tRNA synthetase, SAD Clocl_2838 IPR009000 Translation protein, beta-barrel domain superfamily Clocl_2838 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily Clocl_2838 IPR002318 Alanine-tRNA ligase, class IIc Clocl_2839 IPR002549 Transmembrane protein TqsA-like Clocl_2843 IPR001956 Carbohydrate-binding module 3 Clocl_2843 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clocl_2843 IPR036966 Carbohydrate-binding module 3 superfamily Clocl_2843 IPR024449 Anti-sigma factor RsgI, N-terminal Clocl_2844 IPR014244 RNA polymerase sigma-I type Clocl_2844 IPR013325 RNA polymerase sigma factor, region 2 Clocl_2850 IPR003346 Transposase, IS116/IS110/IS902 Clocl_2850 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal Clocl_2853 IPR022399 Helicase/secretion neighbourhood ATPase Clocl_2853 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_2853 IPR001482 Type II/IV secretion system protein Clocl_2856 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clocl_2856 IPR003594 Histidine kinase/HSP90-like ATPase Clocl_2856 IPR010194 Anti-sigma F factor Clocl_2857 IPR006638 Elp3/MiaB/NifB Clocl_2857 IPR006158 Cobalamin (vitamin B12)-binding domain Clocl_2857 IPR034498 Bacteriochlorophyll C8 methyltransferase Clocl_2857 IPR007197 Radical SAM Clocl_2857 IPR023404 Radical SAM, alpha/beta horseshoe Clocl_2857 IPR020612 Methylthiotransferase, conserved site Clocl_2858 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A Clocl_2858 IPR015956 Penicillin-binding protein, C-terminal domain superfamily Clocl_2858 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal Clocl_2858 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily Clocl_2858 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal Clocl_2858 IPR012338 Beta-lactamase/transpeptidase-like Clocl_2861 IPR001448 Small acid-soluble spore protein, alpha/beta-type Clocl_2861 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site Clocl_2861 IPR038300 SASP, alpha/beta-type superfamily Clocl_2864 IPR003148 Regulator of K+ conductance, N-terminal Clocl_2864 IPR006036 Potassium uptake protein TrkA Clocl_2864 IPR036291 NAD(P)-binding domain superfamily Clocl_2864 IPR006037 Regulator of K+ conductance, C-terminal Clocl_2864 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily Clocl_2865 IPR007353 Protein of unknown function DUF421 Clocl_2865 IPR023090 UPF0702, alpha/beta domain superfamily Clocl_2870 IPR011004 Trimeric LpxA-like superfamily Clocl_2870 IPR005835 Nucleotidyl transferase domain Clocl_2870 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial Clocl_2870 IPR005836 ADP-glucose pyrophosphorylase, conserved site Clocl_2870 IPR011831 Glucose-1-phosphate adenylyltransferase Clocl_2870 IPR029044 Nucleotide-diphospho-sugar transferases Clocl_2871 IPR005836 ADP-glucose pyrophosphorylase, conserved site Clocl_2871 IPR011831 Glucose-1-phosphate adenylyltransferase Clocl_2871 IPR011004 Trimeric LpxA-like superfamily Clocl_2871 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial Clocl_2871 IPR029044 Nucleotide-diphospho-sugar transferases Clocl_2871 IPR005835 Nucleotidyl transferase domain Clocl_2872 IPR018060 DNA binding HTH domain, AraC-type Clocl_2872 IPR001789 Signal transduction response regulator, receiver domain Clocl_2872 IPR009057 Homeobox-like domain superfamily Clocl_2872 IPR011006 CheY-like superfamily Clocl_2873 IPR011767 Glutaredoxin active site Clocl_2873 IPR011911 Glutaredoxin-like protein, YruB Clocl_2873 IPR002109 Glutaredoxin Clocl_2873 IPR036249 Thioredoxin-like superfamily Clocl_2877 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain Clocl_2877 IPR020103 Pseudouridine synthase, catalytic domain superfamily Clocl_2877 IPR036986 RNA-binding S4 domain superfamily Clocl_2877 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F Clocl_2877 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site Clocl_2877 IPR006145 Pseudouridine synthase, RsuA/RluA Clocl_2877 IPR002942 RNA-binding S4 domain Clocl_2878 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal Clocl_2878 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type Clocl_2878 IPR023267 RNA (C5-cytosine) methyltransferase Clocl_2878 IPR031340 Ribosomal RNA small subunit methyltransferase F, first C-terminal domain Clocl_2878 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clocl_2879 IPR033479 Double Cache domain 1 Clocl_2879 IPR003660 HAMP domain Clocl_2879 IPR029151 Periplasmic sensor-like domain superfamily Clocl_2879 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Clocl_2880 IPR001279 Metallo-beta-lactamase Clocl_2880 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Clocl_2882 IPR013078 Histidine phosphatase superfamily, clade-1 Clocl_2882 IPR029033 Histidine phosphatase superfamily Clocl_2882 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site Clocl_2882 IPR023086 Phosphoglycerate mutase, GpmB, probable Clocl_2883 IPR003805 Adenosylcobinamide-GDP ribazoletransferase Clocl_2884 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase Clocl_2884 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_2885 IPR004485 Cobalamin biosynthesis CobD/CbiB Clocl_2886 IPR001048 Aspartate/glutamate/uridylate kinase Clocl_2886 IPR005260 Aspartate kinase, monofunctional class Clocl_2886 IPR001341 Aspartate kinase Clocl_2886 IPR018042 Aspartate kinase, conserved site Clocl_2886 IPR027795 CASTOR, ACT domain Clocl_2886 IPR035804 Aspartokinase 3, N-terminal Clocl_2886 IPR002912 ACT domain Clocl_2886 IPR036393 Acetylglutamate kinase-like superfamily Clocl_2887 IPR002912 ACT domain Clocl_2887 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding Clocl_2887 IPR001342 Homoserine dehydrogenase, catalytic Clocl_2887 IPR019811 Homoserine dehydrogenase, conserved site Clocl_2887 IPR036291 NAD(P)-binding domain superfamily Clocl_2887 IPR016204 Homoserine dehydrogenase Clocl_2888 IPR008310 UPF0735 ACT domain-containing protein Clocl_2888 IPR002912 ACT domain Clocl_2889 IPR029787 Nucleotide cyclase Clocl_2889 IPR037522 HD-GYP domain Clocl_2889 IPR006674 HD domain Clocl_2889 IPR003607 HD/PDEase domain Clocl_2889 IPR000160 GGDEF domain Clocl_2890 IPR004104 Oxidoreductase, C-terminal Clocl_2890 IPR036291 NAD(P)-binding domain superfamily Clocl_2890 IPR000683 Oxidoreductase, N-terminal Clocl_2891 IPR001789 Signal transduction response regulator, receiver domain Clocl_2891 IPR011006 CheY-like superfamily Clocl_2892 IPR037158 Threonine synthase, N-terminal domain superfamily Clocl_2892 IPR004450 Threonine synthase-like Clocl_2892 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Clocl_2892 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site Clocl_2892 IPR029144 Threonine synthase, N-terminal Clocl_2892 IPR001926 Pyridoxal-phosphate dependent enzyme Clocl_2893 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Clocl_2893 IPR002641 Patatin-like phospholipase domain Clocl_2894 IPR015655 Protein phosphatase 2C family Clocl_2894 IPR036457 PPM-type phosphatase domain superfamily Clocl_2894 IPR001932 PPM-type phosphatase domain Clocl_2896 IPR013137 Zinc finger, TFIIB-type Clocl_2901 IPR033940 3-isopropylmalate dehydratase, swivel domain Clocl_2901 IPR004431 3-isopropylmalate dehydratase, small subunit Clocl_2901 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel Clocl_2901 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain Clocl_2902 IPR033941 3-Isopropylmalate dehydratase, catalytic domain Clocl_2902 IPR011826 Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic Clocl_2902 IPR006251 Homoaconitase/3-isopropylmalate dehydratase, large subunit Clocl_2902 IPR036008 Aconitase, iron-sulfur domain Clocl_2902 IPR018136 Aconitase family, 4Fe-4S cluster binding site Clocl_2902 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 Clocl_2902 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain Clocl_2904 IPR001623 DnaJ domain Clocl_2904 IPR036869 Chaperone J-domain superfamily Clocl_2905 IPR013126 Heat shock protein 70 family Clocl_2905 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Clocl_2905 IPR042030 Chaperone protein HscC, nucleotide-binding domain Clocl_2905 IPR018181 Heat shock protein 70, conserved site Clocl_2906 IPR005224 Sugar fermentation stimulation protein Clocl_2906 IPR041465 SfsA, N-terminal OB domain Clocl_2906 IPR040452 Sugar fermentation stimulation protein, C-terminal Clocl_2908 IPR016446 Flavin oxidoreductase Frp family Clocl_2908 IPR029479 Nitroreductase Clocl_2908 IPR000415 Nitroreductase-like Clocl_2909 IPR029479 Nitroreductase Clocl_2909 IPR026021 Putative NAD(P)H nitroreductase YdjA-like Clocl_2909 IPR000415 Nitroreductase-like Clocl_2911 IPR022687 DTXR-type HTH domain Clocl_2911 IPR036390 Winged helix DNA-binding domain superfamily Clocl_2911 IPR022897 HTH-type transcription regulator MntR Clocl_2911 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily Clocl_2911 IPR022689 Iron dependent repressor Clocl_2911 IPR001367 Iron dependent repressor, metal binding and dimerisation domain Clocl_2911 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_2919 IPR009040 Ferritin-like diiron domain Clocl_2919 IPR009078 Ferritin-like superfamily Clocl_2919 IPR003251 Rubrerythrin Clocl_2919 IPR024934 Rubredoxin-like domain Clocl_2919 IPR012347 Ferritin-like Clocl_2920 IPR037171 NagB/RpiA transferase-like Clocl_2920 IPR018321 Glucosamine-6-phosphate isomerase, conserved site Clocl_2920 IPR004547 Glucosamine-6-phosphate isomerase Clocl_2920 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase Clocl_2931 IPR038475 RecG, C-terminal domain superfamily Clocl_2931 IPR033454 RecG, wedge domain Clocl_2931 IPR012340 Nucleic acid-binding, OB-fold Clocl_2931 IPR014001 Helicase superfamily 1/2, ATP-binding domain Clocl_2931 IPR025831 ATP-dependent DNA helicase RecG, C-terminal domain Clocl_2931 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_2931 IPR011545 DEAD/DEAH box helicase domain Clocl_2938 IPR015424 Pyridoxal phosphate-dependent transferase Clocl_2938 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Clocl_2938 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Clocl_2938 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site Clocl_2938 IPR001085 Serine hydroxymethyltransferase Clocl_2938 IPR039429 Serine hydroxymethyltransferase-like domain Clocl_2944 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clocl_2944 IPR002102 Cellulosome anchoring protein, cohesin domain Clocl_2944 IPR001119 S-layer homology domain Clocl_2948 IPR001584 Integrase, catalytic core Clocl_2948 IPR036397 Ribonuclease H superfamily Clocl_2948 IPR012337 Ribonuclease H-like superfamily Clocl_2949 IPR036397 Ribonuclease H superfamily Clocl_2949 IPR012337 Ribonuclease H-like superfamily Clocl_2949 IPR001584 Integrase, catalytic core Clocl_2950 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_2950 IPR036390 Winged helix DNA-binding domain superfamily Clocl_2950 IPR011856 tRNA endonuclease-like domain superfamily Clocl_2950 IPR011335 Restriction endonuclease type II-like Clocl_2950 IPR014832 TnsA endonuclease C-terminal Clocl_2950 IPR014833 TnsA endonuclease, N-terminal Clocl_2957 IPR003593 AAA+ ATPase domain Clocl_2957 IPR001270 ClpA/B family Clocl_2957 IPR002611 IstB-like ATP-binding protein Clocl_2957 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein Clocl_2957 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_2959 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal Clocl_2959 IPR003346 Transposase, IS116/IS110/IS902 Clocl_2962 IPR001207 Transposase, mutator type Clocl_2964 IPR001207 Transposase, mutator type Clocl_2971 IPR005524 Predicted permease DUF318 Clocl_2972 IPR036196 Phosphotyrosine protein phosphatase I superfamily Clocl_2972 IPR023485 Phosphotyrosine protein phosphatase I Clocl_2972 IPR014064 Arsenate reductase ArsC Clocl_2973 IPR038770 Sodium/solute symporter superfamily Clocl_2973 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 Clocl_2973 IPR004706 Arsenical-resistance protein Acr3 Clocl_2974 IPR011991 ArsR-like helix-turn-helix domain Clocl_2974 IPR036390 Winged helix DNA-binding domain superfamily Clocl_2974 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_2974 IPR001845 HTH ArsR-type DNA-binding domain Clocl_2974 IPR018334 ArsR-type transcription regulator, HTH motif Clocl_2979 IPR017932 Glutamine amidotransferase type 2 domain Clocl_2979 IPR035466 GlmS/AgaS, SIS domain 1 Clocl_2979 IPR035490 GlmS/FrlB, SIS domain 2 Clocl_2979 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising Clocl_2979 IPR029055 Nucleophile aminohydrolases, N-terminal Clocl_2979 IPR001347 Sugar isomerase (SIS) Clocl_2980 IPR006352 Phosphoglucosamine mutase, bacterial type Clocl_2980 IPR005841 Alpha-D-phosphohexomutase superfamily Clocl_2980 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily Clocl_2980 IPR005843 Alpha-D-phosphohexomutase, C-terminal Clocl_2980 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I Clocl_2980 IPR016066 Alpha-D-phosphohexomutase, conserved site Clocl_2980 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III Clocl_2980 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II Clocl_2980 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III Clocl_2981 IPR036188 FAD/NAD(P)-binding domain superfamily Clocl_2981 IPR028348 FAD dependent protein Clocl_2983 IPR034701 Diadenylate cyclase CdaA Clocl_2983 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily Clocl_2983 IPR003390 DNA integrity scanning protein, DisA, N-terminal Clocl_2983 IPR014046 Diadenylate cyclase Clocl_2985 IPR023472 Uncharacterised protein family MJ0810 Clocl_2985 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B Clocl_2985 IPR027485 AMMECR1, N-terminal Clocl_2985 IPR002733 AMMECR1 domain Clocl_2985 IPR036071 AMMECR1 domain superfamily Clocl_2985 IPR023473 AMMECR1 Clocl_2985 IPR027623 AmmeMemoRadiSam system protein A Clocl_2988 IPR007167 Ferrous iron transporter FeoA domain Clocl_2988 IPR003373 Ferrous iron transport protein B Clocl_2988 IPR038157 Ferrous iron transporter, core domain Clocl_2988 IPR041069 FeoB, cytosolic helical domain Clocl_2988 IPR030389 FeoB-type guanine nucleotide-binding (G) domain Clocl_2988 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Clocl_2988 IPR006073 GTP binding domain Clocl_2988 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_2988 IPR005225 Small GTP-binding protein domain Clocl_2988 IPR008988 Transcriptional repressor, C-terminal Clocl_2988 IPR011640 Ferrous iron transport protein B, C-terminal Clocl_2991 IPR023650 Beta-lactamase, class-A active site Clocl_2991 IPR012338 Beta-lactamase/transpeptidase-like Clocl_2991 IPR000871 Beta-lactamase, class-A Clocl_2992 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Clocl_2992 IPR010375 Cyclic-di-AMP receptor Clocl_2992 IPR011322 Nitrogen regulatory PII-like, alpha/beta Clocl_2993 IPR012338 Beta-lactamase/transpeptidase-like Clocl_2993 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A Clocl_2993 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal Clocl_2993 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal Clocl_2998 IPR012610 Small acid-soluble spore protein, SspH Clocl_3001 IPR018221 Glycoside hydrolase family 9, His active site Clocl_3001 IPR033126 Glycosyl hydrolases family 9, Asp/Glu active sites Clocl_3001 IPR001701 Glycoside hydrolase family 9 Clocl_3001 IPR027390 Endoglucanase F, domain 3 Clocl_3001 IPR023309 Endoglucanase F, domain 2 Clocl_3001 IPR036966 Carbohydrate-binding module 3 superfamily Clocl_3001 IPR001956 Carbohydrate-binding module 3 Clocl_3001 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clocl_3001 IPR012341 Six-hairpin glycosidase-like superfamily Clocl_3001 IPR008928 Six-hairpin glycosidase superfamily Clocl_3001 IPR000556 Glycoside hydrolase, 48F Clocl_3004 IPR032466 Metal-dependent hydrolase Clocl_3004 IPR003766 Uronate isomerase Clocl_3006 IPR002102 Cellulosome anchoring protein, cohesin domain Clocl_3006 IPR001119 S-layer homology domain Clocl_3006 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clocl_3010 IPR032466 Metal-dependent hydrolase Clocl_3010 IPR006680 Amidohydrolase-related Clocl_3010 IPR011059 Metal-dependent hydrolase, composite domain superfamily Clocl_3010 IPR023512 Deaminase MtaD/DadD Clocl_3011 IPR000043 Adenosylhomocysteinase-like Clocl_3011 IPR042172 Adenosylhomocysteinase-like superfamily Clocl_3011 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Clocl_3011 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site Clocl_3011 IPR036291 NAD(P)-binding domain superfamily Clocl_3012 IPR011268 Purine nucleoside phosphorylase Clocl_3012 IPR018099 Purine phosphorylase, family 2, conserved site Clocl_3012 IPR035994 Nucleoside phosphorylase superfamily Clocl_3012 IPR000845 Nucleoside phosphorylase domain Clocl_3012 IPR011270 Purine nucleoside phosphorylase I, inosine/guanosine-specific Clocl_3014 IPR007390 Sporulation stage V, protein R Clocl_3015 IPR014230 Sporulation protein YhbH Clocl_3015 IPR006698 Uncharacterised protein family UPF0229 Clocl_3015 IPR036465 von Willebrand factor A-like domain superfamily Clocl_3016 IPR013153 PrkA AAA domain Clocl_3016 IPR016230 Serine-protein kinase, PrkA Clocl_3016 IPR010650 PrkA C-terminal domain Clocl_3016 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_3021 IPR002781 Transmembrane protein TauE-like Clocl_3022 IPR003769 Adaptor protein ClpS, core Clocl_3022 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Clocl_3022 IPR022935 ATP-dependent Clp protease adaptor protein ClpS Clocl_3023 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_3023 IPR041546 ClpA/ClpB, AAA lid domain Clocl_3023 IPR028299 ClpA/B, conserved site 2 Clocl_3023 IPR001270 ClpA/B family Clocl_3023 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA Clocl_3023 IPR004176 Clp, N-terminal Clocl_3023 IPR003593 AAA+ ATPase domain Clocl_3023 IPR003959 ATPase, AAA-type, core Clocl_3023 IPR019489 Clp ATPase, C-terminal Clocl_3023 IPR036628 Clp, N-terminal domain superfamily Clocl_3023 IPR018368 ClpA/B, conserved site 1 Clocl_3024 IPR016181 Acyl-CoA N-acyltransferase Clocl_3024 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase Clocl_3024 IPR042203 Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal Clocl_3028 IPR010383 Glycosyl hydrolase 94 Clocl_3028 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily Clocl_3028 IPR037824 NdvB, GH94N domain 2 Clocl_3028 IPR033432 Glycosyl hydrolase 36, catalytic domain Clocl_3028 IPR011013 Galactose mutarotase-like domain superfamily Clocl_3028 IPR019282 Domain of unknown function DUF2329 Clocl_3028 IPR009342 Putative carbohydrate binding domain Clocl_3028 IPR012341 Six-hairpin glycosidase-like superfamily Clocl_3028 IPR008928 Six-hairpin glycosidase superfamily Clocl_3028 IPR037820 NdvB, GH94N domain 1 Clocl_3029 IPR018221 Glycoside hydrolase family 9, His active site Clocl_3029 IPR014756 Immunoglobulin E-set Clocl_3029 IPR013783 Immunoglobulin-like fold Clocl_3029 IPR001701 Glycoside hydrolase family 9 Clocl_3029 IPR033126 Glycosyl hydrolases family 9, Asp/Glu active sites Clocl_3029 IPR036439 Dockerin domain superfamily Clocl_3029 IPR008928 Six-hairpin glycosidase superfamily Clocl_3029 IPR012341 Six-hairpin glycosidase-like superfamily Clocl_3029 IPR004197 Cellulase, Ig-like domain Clocl_3029 IPR002105 Dockerin type I repeat Clocl_3029 IPR016134 Dockerin domain Clocl_3030 IPR029028 Alpha/beta knot methyltransferases Clocl_3030 IPR029064 50S ribosomal protein L30e-like Clocl_3030 IPR004441 RNA methyltransferase TrmH family Clocl_3030 IPR001537 tRNA/rRNA methyltransferase, SpoU type Clocl_3030 IPR013123 RNA 2-O ribose methyltransferase, substrate binding Clocl_3030 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Clocl_3031 IPR035566 Ribosomal protein L20, C-terminal Clocl_3031 IPR005813 Ribosomal protein L20 Clocl_3032 IPR021137 Ribosomal protein L35 Clocl_3032 IPR018265 Ribosomal protein L35, conserved site Clocl_3032 IPR001706 Ribosomal protein L35, non-mitochondrial Clocl_3032 IPR037229 Ribosomal protein L35 superfamily Clocl_3033 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily Clocl_3033 IPR019814 Translation initiation factor 3, N-terminal Clocl_3033 IPR019815 Translation initiation factor 3, C-terminal Clocl_3033 IPR001288 Translation initiation factor 3 Clocl_3033 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily Clocl_3033 IPR019813 Translation initiation factor 3, conserved site Clocl_3034 IPR025246 Transposase IS30-like HTH domain Clocl_3034 IPR001584 Integrase, catalytic core Clocl_3034 IPR036397 Ribonuclease H superfamily Clocl_3034 IPR001598 Transposase, IS30, conserved site Clocl_3034 IPR012337 Ribonuclease H-like superfamily Clocl_3035 IPR003669 Thymidylate synthase ThyX Clocl_3035 IPR036098 Thymidylate synthase ThyX superfamily Clocl_3036 IPR012947 Threonyl/alanyl tRNA synthetase, SAD Clocl_3036 IPR033728 Threonine-tRNA ligase catalytic core domain Clocl_3036 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily Clocl_3036 IPR002320 Threonine-tRNA ligase, class IIa Clocl_3036 IPR012676 TGS-like Clocl_3036 IPR004095 TGS Clocl_3036 IPR012675 Beta-grasp domain superfamily Clocl_3036 IPR036621 Anticodon-binding domain superfamily Clocl_3036 IPR004154 Anticodon-binding Clocl_3036 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) Clocl_3036 IPR006195 Aminoacyl-tRNA synthetase, class II Clocl_3038 IPR033126 Glycosyl hydrolases family 9, Asp/Glu active sites Clocl_3038 IPR001701 Glycoside hydrolase family 9 Clocl_3038 IPR036966 Carbohydrate-binding module 3 superfamily Clocl_3038 IPR001956 Carbohydrate-binding module 3 Clocl_3038 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clocl_3038 IPR012341 Six-hairpin glycosidase-like superfamily Clocl_3038 IPR008928 Six-hairpin glycosidase superfamily Clocl_3038 IPR018221 Glycoside hydrolase family 9, His active site Clocl_3040 IPR010994 RuvA domain 2-like Clocl_3040 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 Clocl_3040 IPR004509 Competence protein ComEA, helix-hairpin-helix domain Clocl_3042 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal Clocl_3042 IPR012338 Beta-lactamase/transpeptidase-like Clocl_3042 IPR015956 Penicillin-binding protein, C-terminal domain superfamily Clocl_3042 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal Clocl_3042 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A Clocl_3042 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily Clocl_3044 IPR001207 Transposase, mutator type Clocl_3050 IPR017871 ABC transporter, conserved site Clocl_3050 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_3050 IPR003593 AAA+ ATPase domain Clocl_3050 IPR003439 ABC transporter-like Clocl_3052 IPR001207 Transposase, mutator type Clocl_3053 IPR004394 Protein Iojap/ribosomal silencing factor RsfS Clocl_3055 IPR005249 Conserved hypothetical protein CHP00488 Clocl_3055 IPR003607 HD/PDEase domain Clocl_3055 IPR006674 HD domain Clocl_3056 IPR004821 Cytidyltransferase-like domain Clocl_3056 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clocl_3056 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase Clocl_3057 IPR000600 ROK family Clocl_3057 IPR004654 Glucokinase ROK Clocl_3058 IPR007934 Alpha-L-arabinofuranosidase B, arabinose-binding domain Clocl_3058 IPR036195 Alpha-L-arabinofuranosidase B, arabinose-binding domain superfamily Clocl_3058 IPR006710 Glycoside hydrolase, family 43 Clocl_3058 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Clocl_3061 IPR016040 NAD(P)-binding domain Clocl_3061 IPR036291 NAD(P)-binding domain superfamily Clocl_3066 IPR011054 Rudiment single hybrid motif Clocl_3066 IPR020559 Phosphoribosylglycinamide synthetase, conserved site Clocl_3066 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily Clocl_3066 IPR020560 Phosphoribosylglycinamide synthetase, C-domain Clocl_3066 IPR000115 Phosphoribosylglycinamide synthetase Clocl_3066 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal Clocl_3066 IPR016185 Pre-ATP-grasp domain superfamily Clocl_3066 IPR013815 ATP-grasp fold, subdomain 1 Clocl_3066 IPR011761 ATP-grasp fold Clocl_3066 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Clocl_3067 IPR002695 Bifunctional purine biosynthesis protein PurH-like Clocl_3067 IPR036914 Methylglyoxal synthase-like domain superfamily Clocl_3067 IPR011607 Methylglyoxal synthase-like domain Clocl_3067 IPR024051 AICAR transformylase, duplicated domain superfamily Clocl_3067 IPR016193 Cytidine deaminase-like Clocl_3068 IPR002376 Formyl transferase, N-terminal Clocl_3068 IPR036477 Formyl transferase, N-terminal domain superfamily Clocl_3068 IPR004607 Phosphoribosylglycinamide formyltransferase Clocl_3068 IPR001555 Phosphoribosylglycinamide formyltransferase, active site Clocl_3069 IPR036676 PurM-like, C-terminal domain superfamily Clocl_3069 IPR010918 PurM-like, C-terminal domain Clocl_3069 IPR016188 PurM-like, N-terminal domain Clocl_3069 IPR036921 PurM-like, N-terminal domain superfamily Clocl_3069 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase Clocl_3070 IPR035584 Amidophosphoribosyltransferase, N-terminal Clocl_3070 IPR005854 Amidophosphoribosyltransferase Clocl_3070 IPR029057 Phosphoribosyltransferase-like Clocl_3070 IPR017932 Glutamine amidotransferase type 2 domain Clocl_3070 IPR029055 Nucleophile aminohydrolases, N-terminal Clocl_3070 IPR000836 Phosphoribosyltransferase domain Clocl_3071 IPR033747 Class I PurE Clocl_3071 IPR000031 PurE domain Clocl_3071 IPR024694 PurE, prokaryotic type Clocl_3071 IPR035893 PurE domain superfamily Clocl_3072 IPR026033 Azaguanine-like transporters Clocl_3072 IPR006043 Xanthine/uracil/vitamin C permease Clocl_3075 IPR002686 Transposase IS200-like Clocl_3075 IPR036515 Transposase IS200-like superfamily Clocl_3081 IPR001598 Transposase, IS30, conserved site Clocl_3081 IPR012337 Ribonuclease H-like superfamily Clocl_3081 IPR036397 Ribonuclease H superfamily Clocl_3081 IPR001584 Integrase, catalytic core Clocl_3081 IPR025246 Transposase IS30-like HTH domain Clocl_3083 IPR001674 GMP synthase, C-terminal Clocl_3083 IPR004739 GMP synthase, glutamine amidotransferase Clocl_3083 IPR022955 GMP synthase Clocl_3083 IPR025777 GMP synthetase ATP pyrophosphatase domain Clocl_3083 IPR022310 NAD/GMP synthase Clocl_3083 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clocl_3083 IPR029062 Class I glutamine amidotransferase-like Clocl_3083 IPR017926 Glutamine amidotransferase Clocl_3085 IPR002822 Nickel insertion protein Clocl_3086 IPR039476 Pyridinium-3,5-biscarboxylic acid mononucleotide synthase Clocl_3086 IPR000031 PurE domain Clocl_3086 IPR035893 PurE domain superfamily Clocl_3089 IPR005139 Peptide chain release factor Clocl_3089 IPR000352 Peptide chain release factor class I Clocl_3089 IPR004374 Peptide chain release factor 2 Clocl_3092 IPR000150 Cof family Clocl_3092 IPR036412 HAD-like superfamily Clocl_3092 IPR023214 HAD superfamily Clocl_3092 IPR006379 HAD-superfamily hydrolase, subfamily IIB Clocl_3093 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Clocl_3093 IPR004839 Aminotransferase, class I/classII Clocl_3093 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site Clocl_3093 IPR015424 Pyridoxal phosphate-dependent transferase Clocl_3093 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Clocl_3094 IPR036390 Winged helix DNA-binding domain superfamily Clocl_3094 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_3094 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Clocl_3094 IPR019888 Transcription regulator AsnC-type Clocl_3094 IPR011008 Dimeric alpha-beta barrel Clocl_3094 IPR000485 AsnC-type HTH domain Clocl_3096 IPR005746 Thioredoxin Clocl_3096 IPR036249 Thioredoxin-like superfamily Clocl_3096 IPR017937 Thioredoxin, conserved site Clocl_3096 IPR013766 Thioredoxin domain Clocl_3097 IPR003735 Metal-sensitive transcriptional repressor Clocl_3097 IPR038390 Metal-sensitive transcriptional repressor superfamily Clocl_3100 IPR011834 Alpha-glucan phosphorylase Clocl_3100 IPR000811 Glycosyl transferase, family 35 Clocl_3100 IPR024517 Glycogen phosphorylase, domain of unknown function DUF3417 Clocl_3100 IPR035090 Phosphorylase pyridoxal-phosphate attachment site Clocl_3101 IPR005287 Conserved hypothetical protein CHP00375 Clocl_3101 IPR010994 RuvA domain 2-like Clocl_3101 IPR016195 Polymerase/histidinol phosphatase-like Clocl_3102 IPR013785 Aldolase-type TIM barrel Clocl_3102 IPR000891 Pyruvate carboxyltransferase Clocl_3103 IPR001137 Glycoside hydrolase family 11 Clocl_3103 IPR002509 NodB homology domain Clocl_3103 IPR033123 Glycosyl hydrolases family 11 (GH11) domain Clocl_3103 IPR005084 Carbohydrate binding module family 6 Clocl_3103 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Clocl_3103 IPR008979 Galactose-binding-like domain superfamily Clocl_3103 IPR013319 Glycoside hydrolase family 11/12 Clocl_3103 IPR018208 Glycoside hydrolase family 11, active site 1 Clocl_3103 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel Clocl_3103 IPR033119 Glycoside hydrolase family 11, active site 2 Clocl_3104 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Clocl_3104 IPR008275 CoA enzyme activase Clocl_3107 IPR019533 Peptidase S26 Clocl_3107 IPR000223 Peptidase S26A, signal peptidase I Clocl_3107 IPR036286 LexA/Signal peptidase-like superfamily Clocl_3107 IPR019758 Peptidase S26A, signal peptidase I, conserved site Clocl_3107 IPR019756 Peptidase S26A, signal peptidase I, serine active site Clocl_3107 IPR019757 Peptidase S26A, signal peptidase I, lysine active site Clocl_3108 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 Clocl_3108 IPR000771 Fructose-bisphosphate aldolase, class-II Clocl_3108 IPR013785 Aldolase-type TIM barrel Clocl_3109 IPR000023 Phosphofructokinase domain Clocl_3109 IPR011404 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, XF0274 Clocl_3109 IPR035966 Phosphofructokinase superfamily Clocl_3109 IPR022953 ATP-dependent 6-phosphofructokinase Clocl_3110 IPR005949 Formate acetyltransferase Clocl_3110 IPR001150 Glycine radical domain Clocl_3110 IPR019777 Formate C-acetyltransferase glycine radical, conserved site Clocl_3110 IPR004184 Pyruvate formate lyase domain Clocl_3111 IPR013785 Aldolase-type TIM barrel Clocl_3111 IPR040074 BssD/PflA/YjjW Clocl_3111 IPR034457 Organic radical-activating enzymes Clocl_3111 IPR012839 Organic radical enzyme activase Clocl_3111 IPR012838 Pyruvate formate-lyase 1 activating enzyme Clocl_3111 IPR034465 Pyruvate formate-lyase activase Clocl_3111 IPR001989 Radical-activating enzyme, conserved site Clocl_3111 IPR007197 Radical SAM Clocl_3113 IPR024449 Anti-sigma factor RsgI, N-terminal Clocl_3113 IPR037524 PA14/GLEYA domain Clocl_3113 IPR011658 PA14 domain Clocl_3120 IPR001482 Type II/IV secretion system protein Clocl_3120 IPR007831 General secretory system II, protein E, N-terminal Clocl_3120 IPR013374 ATPase, type IV, pilus assembly, PilB Clocl_3120 IPR003593 AAA+ ATPase domain Clocl_3120 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_3120 IPR037257 General secretory system II, protein E, N-terminal superfamily Clocl_3125 IPR027304 Trigger factor/SurA domain superfamily Clocl_3125 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Clocl_3125 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type Clocl_3127 IPR028299 ClpA/B, conserved site 2 Clocl_3127 IPR041546 ClpA/ClpB, AAA lid domain Clocl_3127 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_3127 IPR001270 ClpA/B family Clocl_3127 IPR036628 Clp, N-terminal domain superfamily Clocl_3127 IPR019489 Clp ATPase, C-terminal Clocl_3127 IPR003959 ATPase, AAA-type, core Clocl_3127 IPR003593 AAA+ ATPase domain Clocl_3127 IPR018368 ClpA/B, conserved site 1 Clocl_3127 IPR001943 UVR domain Clocl_3127 IPR004176 Clp, N-terminal Clocl_3128 IPR041552 UvrA DNA-binding domain Clocl_3128 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_3128 IPR041102 UvrA, interaction domain Clocl_3128 IPR003439 ABC transporter-like Clocl_3128 IPR017871 ABC transporter, conserved site Clocl_3128 IPR004602 UvrABC system subunit A Clocl_3128 IPR003593 AAA+ ATPase domain Clocl_3129 IPR006935 Helicase/UvrB, N-terminal Clocl_3129 IPR024759 UvrB, YAD/RRR-motif-containing domain Clocl_3129 IPR004807 UvrABC system, subunit B Clocl_3129 IPR036876 UVR domain superfamily Clocl_3129 IPR041471 UvrB, interaction domain Clocl_3129 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_3129 IPR001650 Helicase, C-terminal Clocl_3129 IPR014001 Helicase superfamily 1/2, ATP-binding domain Clocl_3129 IPR001943 UVR domain Clocl_3131 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_3132 IPR002105 Dockerin type I repeat Clocl_3132 IPR016134 Dockerin domain Clocl_3132 IPR008979 Galactose-binding-like domain superfamily Clocl_3132 IPR022790 Glycosyl hydrolase family 26 domain Clocl_3132 IPR001547 Glycoside hydrolase, family 5 Clocl_3132 IPR018087 Glycoside hydrolase, family 5, conserved site Clocl_3132 IPR017853 Glycoside hydrolase superfamily Clocl_3132 IPR005087 Carbohydrate binding module family 11 Clocl_3132 IPR036439 Dockerin domain superfamily Clocl_3135 IPR031967 PhoR, single Cache-like domain Clocl_3135 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clocl_3135 IPR003594 Histidine kinase/HSP90-like ATPase Clocl_3135 IPR013767 PAS fold Clocl_3135 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Clocl_3135 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Clocl_3135 IPR005467 Histidine kinase domain Clocl_3135 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Clocl_3135 IPR035965 PAS domain superfamily Clocl_3135 IPR000014 PAS domain Clocl_3136 IPR001867 OmpR/PhoB-type DNA-binding domain Clocl_3136 IPR011006 CheY-like superfamily Clocl_3136 IPR016032 Signal transduction response regulator, C-terminal effector Clocl_3136 IPR001789 Signal transduction response regulator, receiver domain Clocl_3136 IPR039420 Transcriptional regulatory protein WalR-like Clocl_3136 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_3140 IPR037219 Peptidase M41-like Clocl_3140 IPR000642 Peptidase M41 Clocl_3140 IPR011546 Peptidase M41, FtsH extracellular Clocl_3140 IPR003593 AAA+ ATPase domain Clocl_3140 IPR041569 AAA ATPase, AAA+ lid domain Clocl_3140 IPR003960 ATPase, AAA-type, conserved site Clocl_3140 IPR005936 Peptidase, FtsH Clocl_3140 IPR003959 ATPase, AAA-type, core Clocl_3140 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_3147 IPR002105 Dockerin type I repeat Clocl_3147 IPR016134 Dockerin domain Clocl_3147 IPR036439 Dockerin domain superfamily Clocl_3147 IPR018247 EF-Hand 1, calcium-binding site Clocl_3147 IPR015943 WD40/YVTN repeat-like-containing domain superfamily Clocl_3150 IPR034466 Methyltransferase, class B Clocl_3150 IPR006638 Elp3/MiaB/NifB Clocl_3150 IPR006158 Cobalamin (vitamin B12)-binding domain Clocl_3150 IPR023404 Radical SAM, alpha/beta horseshoe Clocl_3150 IPR007197 Radical SAM Clocl_3161 IPR000477 Reverse transcriptase domain Clocl_3161 IPR024937 Domain X Clocl_3163 IPR003593 AAA+ ATPase domain Clocl_3163 IPR001270 ClpA/B family Clocl_3163 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein Clocl_3163 IPR002611 IstB-like ATP-binding protein Clocl_3163 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_3164 IPR002514 Transposase IS3/IS911family Clocl_3164 IPR009057 Homeobox-like domain superfamily Clocl_3165 IPR008878 Transposase IS66, Orf2 Clocl_3169 IPR022385 Rhs repeat-associated core Clocl_3169 IPR006530 YD repeat Clocl_3169 IPR031325 RHS repeat Clocl_3169 IPR008979 Galactose-binding-like domain superfamily Clocl_3172 IPR024474 Zinc-finger binding domain of transposase IS66 Clocl_3172 IPR024463 Transposase TnpC, homeodomain Clocl_3172 IPR004291 Transposase, IS66 Clocl_3172 IPR039552 Transposase IS66, C-terminal Clocl_3173 IPR008878 Transposase IS66, Orf2 Clocl_3174 IPR009057 Homeobox-like domain superfamily Clocl_3174 IPR002514 Transposase IS3/IS911family Clocl_3175 IPR001207 Transposase, mutator type Clocl_3179 IPR017871 ABC transporter, conserved site Clocl_3179 IPR003593 AAA+ ATPase domain Clocl_3179 IPR003439 ABC transporter-like Clocl_3179 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_3184 IPR010499 Bacterial transcription activator, effector binding Clocl_3184 IPR029442 GyrI-like small molecule binding domain Clocl_3184 IPR009057 Homeobox-like domain superfamily Clocl_3184 IPR018060 DNA binding HTH domain, AraC-type Clocl_3184 IPR018062 HTH domain AraC-type, conserved site Clocl_3184 IPR011256 Regulatory factor, effector binding domain superfamily Clocl_3184 IPR020449 Transcription regulator HTH, AraC- type Clocl_3203 IPR008878 Transposase IS66, Orf2 Clocl_3204 IPR002514 Transposase IS3/IS911family Clocl_3204 IPR009057 Homeobox-like domain superfamily Clocl_3210 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily Clocl_3210 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone Clocl_3210 IPR001424 Superoxide dismutase, copper/zinc binding domain Clocl_3211 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal Clocl_3211 IPR005743 DNA gyrase, subunit A Clocl_3211 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat Clocl_3211 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal Clocl_3211 IPR013760 DNA topoisomerase, type IIA-like domain superfamily Clocl_3211 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta Clocl_3211 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily Clocl_3212 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clocl_3212 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal Clocl_3212 IPR001241 DNA topoisomerase, type IIA Clocl_3212 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 Clocl_3212 IPR013760 DNA topoisomerase, type IIA-like domain superfamily Clocl_3212 IPR018522 DNA topoisomerase, type IIA, conserved site Clocl_3212 IPR002288 DNA gyrase B subunit, C-terminal Clocl_3212 IPR034160 DNA gyrase subunit B, TOPRIM domain Clocl_3212 IPR003594 Histidine kinase/HSP90-like ATPase Clocl_3212 IPR011557 DNA gyrase, subunit B Clocl_3212 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Clocl_3212 IPR006171 TOPRIM domain Clocl_3212 IPR020568 Ribosomal protein S5 domain 2-type fold Clocl_3216 IPR014258 CAP domain, YkwD-like Clocl_3216 IPR035940 CAP superfamily Clocl_3216 IPR014044 CAP domain Clocl_3222 IPR008844 Spore germination GerAC Clocl_3222 IPR038501 Spore germination GerAC superfamily Clocl_3223 IPR004995 Bacillus/Clostridium Ger spore germination protein Clocl_3224 IPR000192 Aminotransferase class V domain Clocl_3224 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site Clocl_3224 IPR022278 Phosphoserine aminotransferase Clocl_3224 IPR015424 Pyridoxal phosphate-dependent transferase Clocl_3224 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Clocl_3224 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Clocl_3225 IPR003784 BioY protein Clocl_3226 IPR012825 5,6-dimethylbenzimidazole synthase BluB Clocl_3226 IPR029479 Nitroreductase Clocl_3226 IPR000415 Nitroreductase-like Clocl_3227 IPR036291 NAD(P)-binding domain superfamily Clocl_3227 IPR020904 Short-chain dehydrogenase/reductase, conserved site Clocl_3227 IPR002347 Short-chain dehydrogenase/reductase SDR Clocl_3234 IPR023576 UbiE/COQ5 methyltransferase, conserved site Clocl_3234 IPR014122 Demethylmenaquinone methyltransferase Clocl_3234 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clocl_3234 IPR004033 UbiE/COQ5 methyltransferase Clocl_3237 IPR003346 Transposase, IS116/IS110/IS902 Clocl_3237 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal Clocl_3238 IPR012341 Six-hairpin glycosidase-like superfamily Clocl_3238 IPR004879 Domain of unknown function DUF255 Clocl_3238 IPR024705 Spermatogenesis-associated protein 20 Clocl_3238 IPR036249 Thioredoxin-like superfamily Clocl_3238 IPR008928 Six-hairpin glycosidase superfamily Clocl_3239 IPR003610 Carbohydrate-binding module family 5/12 Clocl_3239 IPR011583 Chitinase II Clocl_3239 IPR003961 Fibronectin type III Clocl_3239 IPR036116 Fibronectin type III superfamily Clocl_3239 IPR001223 Glycoside hydrolase family 18, catalytic domain Clocl_3239 IPR001579 Glycoside hydrolase, chitinase active site Clocl_3239 IPR017853 Glycoside hydrolase superfamily Clocl_3239 IPR013783 Immunoglobulin-like fold Clocl_3239 IPR036573 Carbohydrate-binding module superfamily 5/12 Clocl_3239 IPR029070 Chitinase insertion domain superfamily Clocl_3240 IPR001650 Helicase, C-terminal Clocl_3240 IPR006555 ATP-dependent helicase, C-terminal Clocl_3240 IPR010614 DEAD2 Clocl_3240 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type Clocl_3240 IPR014001 Helicase superfamily 1/2, ATP-binding domain Clocl_3240 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_3242 IPR023214 HAD superfamily Clocl_3242 IPR023299 P-type ATPase, cytoplasmic domain N Clocl_3242 IPR017969 Heavy-metal-associated, conserved site Clocl_3242 IPR018303 P-type ATPase, phosphorylation site Clocl_3242 IPR023298 P-type ATPase, transmembrane domain superfamily Clocl_3242 IPR008250 P-type ATPase, A domain superfamily Clocl_3242 IPR001757 P-type ATPase Clocl_3242 IPR027256 P-type ATPase, subfamily IB Clocl_3242 IPR036163 Heavy metal-associated domain superfamily Clocl_3242 IPR006121 Heavy metal-associated domain, HMA Clocl_3242 IPR036412 HAD-like superfamily Clocl_3243 IPR036390 Winged helix DNA-binding domain superfamily Clocl_3243 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_3243 IPR001845 HTH ArsR-type DNA-binding domain Clocl_3243 IPR018334 ArsR-type transcription regulator, HTH motif Clocl_3243 IPR011991 ArsR-like helix-turn-helix domain Clocl_3244 IPR018120 Glycoside hydrolase family 1, active site Clocl_3244 IPR001360 Glycoside hydrolase family 1 Clocl_3244 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site Clocl_3244 IPR017736 Glycoside hydrolase, family 1, beta-glucosidase Clocl_3244 IPR017853 Glycoside hydrolase superfamily Clocl_3245 IPR011006 CheY-like superfamily Clocl_3245 IPR003607 HD/PDEase domain Clocl_3245 IPR006674 HD domain Clocl_3245 IPR037522 HD-GYP domain Clocl_3245 IPR001789 Signal transduction response regulator, receiver domain Clocl_3247 IPR017853 Glycoside hydrolase superfamily Clocl_3247 IPR013785 Aldolase-type TIM barrel Clocl_3247 IPR003790 Glycosyl hydrolase-like 10 Clocl_3247 IPR013783 Immunoglobulin-like fold Clocl_3252 IPR035917 YjbQ-like superfamily Clocl_3252 IPR001602 Uncharacterised protein family UPF0047 Clocl_3253 IPR036966 Carbohydrate-binding module 3 superfamily Clocl_3253 IPR033126 Glycosyl hydrolases family 9, Asp/Glu active sites Clocl_3253 IPR018221 Glycoside hydrolase family 9, His active site Clocl_3253 IPR001956 Carbohydrate-binding module 3 Clocl_3253 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clocl_3253 IPR012341 Six-hairpin glycosidase-like superfamily Clocl_3253 IPR008928 Six-hairpin glycosidase superfamily Clocl_3253 IPR001701 Glycoside hydrolase family 9 Clocl_3255 IPR008928 Six-hairpin glycosidase superfamily Clocl_3255 IPR033126 Glycosyl hydrolases family 9, Asp/Glu active sites Clocl_3255 IPR018221 Glycoside hydrolase family 9, His active site Clocl_3255 IPR012341 Six-hairpin glycosidase-like superfamily Clocl_3255 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clocl_3255 IPR001956 Carbohydrate-binding module 3 Clocl_3255 IPR036966 Carbohydrate-binding module 3 superfamily Clocl_3255 IPR001701 Glycoside hydrolase family 9 Clocl_3262 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent Clocl_3262 IPR005144 ATP-cone domain Clocl_3262 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal Clocl_3262 IPR013509 Ribonucleotide reductase large subunit, N-terminal Clocl_3262 IPR000788 Ribonucleotide reductase large subunit, C-terminal Clocl_3270 IPR005273 Uracil-DNA glycosylase family 4 Clocl_3270 IPR005122 Uracil-DNA glycosylase-like Clocl_3270 IPR036895 Uracil-DNA glycosylase-like domain superfamily Clocl_3271 IPR007197 Radical SAM Clocl_3271 IPR024924 7-carboxy-7-deazaguanine synthase-like Clocl_3271 IPR013785 Aldolase-type TIM barrel Clocl_3272 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Clocl_3272 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Clocl_3273 IPR018317 Queuosine biosynthesis protein QueC Clocl_3273 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clocl_3274 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Clocl_3274 IPR008275 CoA enzyme activase Clocl_3277 IPR004474 Cell envelope-related transcriptional attenuator domain Clocl_3278 IPR004839 Aminotransferase, class I/classII Clocl_3278 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Clocl_3278 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Clocl_3278 IPR015424 Pyridoxal phosphate-dependent transferase Clocl_3278 IPR019942 LL-diaminopimelate aminotransferase/aminotransferase ALD1 Clocl_3279 IPR001653 Diaminopimelate epimerase, DapF Clocl_3279 IPR018510 Diaminopimelate epimerase, active site Clocl_3283 IPR029044 Nucleotide-diphospho-sugar transferases Clocl_3283 IPR001173 Glycosyltransferase 2-like Clocl_3289 IPR018220 Adenylosuccinate synthase, GTP-binding site Clocl_3289 IPR033128 Adenylosuccinate synthase, active site Clocl_3289 IPR042109 Adenylosuccinate synthetase, domain 1 Clocl_3289 IPR042110 Adenylosuccinate synthetase, domain 2 Clocl_3289 IPR042111 Adenylosuccinate synthetase, domain 3 Clocl_3289 IPR001114 Adenylosuccinate synthetase Clocl_3289 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_3291 IPR011167 Iron-dependent fumarate hydratase Clocl_3291 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily Clocl_3291 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain Clocl_3291 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain Clocl_3292 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain Clocl_3294 IPR000119 Histone-like DNA-binding protein Clocl_3294 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily Clocl_3294 IPR020816 Histone-like DNA-binding protein, conserved site Clocl_3295 IPR014879 Sporulation initiation factor Spo0A, C-terminal Clocl_3295 IPR001789 Signal transduction response regulator, receiver domain Clocl_3295 IPR016032 Signal transduction response regulator, C-terminal effector Clocl_3295 IPR011006 CheY-like superfamily Clocl_3295 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_3295 IPR012052 Sporulation transcription factor Spo0A Clocl_3296 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta Clocl_3296 IPR001986 Enolpyruvate transferase domain Clocl_3296 IPR036968 Enolpyruvate transferase domain superfamily Clocl_3296 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase Clocl_3296 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site Clocl_3297 IPR011006 CheY-like superfamily Clocl_3297 IPR001789 Signal transduction response regulator, receiver domain Clocl_3297 IPR007492 LytTR DNA-binding domain Clocl_3298 IPR002052 DNA methylase, N-6 adenine-specific, conserved site Clocl_3298 IPR004114 THUMP domain Clocl_3298 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clocl_3298 IPR000241 Putative RNA methylase domain Clocl_3303 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clocl_3303 IPR002102 Cellulosome anchoring protein, cohesin domain Clocl_3303 IPR001119 S-layer homology domain Clocl_3304 IPR002102 Cellulosome anchoring protein, cohesin domain Clocl_3304 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clocl_3304 IPR001119 S-layer homology domain Clocl_3305 IPR001119 S-layer homology domain Clocl_3305 IPR002102 Cellulosome anchoring protein, cohesin domain Clocl_3305 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clocl_3306 IPR014756 Immunoglobulin E-set Clocl_3306 IPR013783 Immunoglobulin-like fold Clocl_3306 IPR002102 Cellulosome anchoring protein, cohesin domain Clocl_3306 IPR036966 Carbohydrate-binding module 3 superfamily Clocl_3306 IPR001956 Carbohydrate-binding module 3 Clocl_3306 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clocl_3306 IPR005102 Carbohydrate binding X2 domain Clocl_3307 IPR041492 Haloacid dehalogenase-like hydrolase Clocl_3307 IPR023214 HAD superfamily Clocl_3307 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Clocl_3307 IPR006439 HAD hydrolase, subfamily IA Clocl_3307 IPR036412 HAD-like superfamily Clocl_3308 IPR012338 Beta-lactamase/transpeptidase-like Clocl_3308 IPR001460 Penicillin-binding protein, transpeptidase Clocl_3309 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site Clocl_3309 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA Clocl_3311 IPR025874 Double zinc ribbon Clocl_3311 IPR000253 Forkhead-associated (FHA) domain Clocl_3311 IPR008984 SMAD/FHA domain superfamily Clocl_3312 IPR003607 HD/PDEase domain Clocl_3312 IPR037522 HD-GYP domain Clocl_3312 IPR001789 Signal transduction response regulator, receiver domain Clocl_3312 IPR011006 CheY-like superfamily Clocl_3313 IPR019734 Tetratricopeptide repeat Clocl_3313 IPR011990 Tetratricopeptide-like helical domain superfamily Clocl_3313 IPR013026 Tetratricopeptide repeat-containing domain Clocl_3313 IPR035952 Rhomboid-like superfamily Clocl_3313 IPR022764 Peptidase S54, rhomboid domain Clocl_3318 IPR003593 AAA+ ATPase domain Clocl_3318 IPR003439 ABC transporter-like Clocl_3318 IPR017871 ABC transporter, conserved site Clocl_3318 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_3320 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Clocl_3320 IPR035965 PAS domain superfamily Clocl_3320 IPR000700 PAS-associated, C-terminal Clocl_3320 IPR003660 HAMP domain Clocl_3320 IPR003594 Histidine kinase/HSP90-like ATPase Clocl_3320 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clocl_3320 IPR005467 Histidine kinase domain Clocl_3320 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Clocl_3320 IPR001610 PAC motif Clocl_3320 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Clocl_3320 IPR000014 PAS domain Clocl_3321 IPR001867 OmpR/PhoB-type DNA-binding domain Clocl_3321 IPR016032 Signal transduction response regulator, C-terminal effector Clocl_3321 IPR001789 Signal transduction response regulator, receiver domain Clocl_3321 IPR039420 Transcriptional regulatory protein WalR-like Clocl_3321 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_3321 IPR011006 CheY-like superfamily Clocl_3322 IPR039421 Type I protein exporter Clocl_3322 IPR003439 ABC transporter-like Clocl_3322 IPR003593 AAA+ ATPase domain Clocl_3322 IPR011527 ABC transporter type 1, transmembrane domain Clocl_3322 IPR017871 ABC transporter, conserved site Clocl_3322 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_3322 IPR036640 ABC transporter type 1, transmembrane domain superfamily Clocl_3323 IPR003791 Protein of unknown function UPF0178 Clocl_3324 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_3324 IPR006321 Pilus retraction protein PilT Clocl_3324 IPR001482 Type II/IV secretion system protein Clocl_3324 IPR003593 AAA+ ATPase domain Clocl_3325 IPR018177 L-lactate dehydrogenase, active site Clocl_3325 IPR022383 Lactate/malate dehydrogenase, C-terminal Clocl_3325 IPR001236 Lactate/malate dehydrogenase, N-terminal Clocl_3325 IPR001557 L-lactate/malate dehydrogenase Clocl_3325 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal Clocl_3325 IPR036291 NAD(P)-binding domain superfamily Clocl_3325 IPR011304 L-lactate dehydrogenase Clocl_3326 IPR036291 NAD(P)-binding domain superfamily Clocl_3326 IPR001891 Malic oxidoreductase Clocl_3326 IPR037062 Malic enzyme, N-terminal domain superfamily Clocl_3326 IPR012302 Malic enzyme, NAD-binding Clocl_3326 IPR012301 Malic enzyme, N-terminal domain Clocl_3326 IPR015884 Malic enzyme, conserved site Clocl_3327 IPR008979 Galactose-binding-like domain superfamily Clocl_3327 IPR037459 Rhamnogalacturonan acetylesterase RhgT-like Clocl_3327 IPR013830 SGNH hydrolase-type esterase domain Clocl_3327 IPR036514 SGNH hydrolase superfamily Clocl_3330 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_3330 IPR036187 DNA mismatch repair protein MutS, core domain superfamily Clocl_3330 IPR016151 DNA mismatch repair protein MutS, N-terminal Clocl_3330 IPR007696 DNA mismatch repair protein MutS, core Clocl_3330 IPR007861 DNA mismatch repair protein MutS, clamp Clocl_3330 IPR000432 DNA mismatch repair protein MutS, C-terminal Clocl_3330 IPR017261 DNA mismatch repair protein MutS/MSH Clocl_3330 IPR007695 DNA mismatch repair protein MutS-like, N-terminal Clocl_3330 IPR005748 DNA mismatch repair protein MutS Clocl_3330 IPR036678 MutS, connector domain superfamily Clocl_3330 IPR007860 DNA mismatch repair protein MutS, connector domain Clocl_3331 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 Clocl_3331 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Clocl_3331 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Clocl_3331 IPR002912 ACT domain Clocl_3331 IPR036291 NAD(P)-binding domain superfamily Clocl_3331 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain Clocl_3332 IPR028624 Transcription elongation factor GreA/GreB Clocl_3332 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily Clocl_3332 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal Clocl_3332 IPR023459 Transcription elongation factor GreA/GreB family Clocl_3332 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily Clocl_3332 IPR018151 Transcription elongation factor, GreA/GreB, conserved site Clocl_3332 IPR006359 Transcription elongation factor GreA Clocl_3332 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal Clocl_3333 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal Clocl_3333 IPR000073 Alpha/beta hydrolase fold-1 Clocl_3333 IPR029058 Alpha/Beta hydrolase fold Clocl_3333 IPR000639 Epoxide hydrolase-like Clocl_3334 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clocl_3334 IPR001119 S-layer homology domain Clocl_3334 IPR002102 Cellulosome anchoring protein, cohesin domain Clocl_3339 IPR013325 RNA polymerase sigma factor, region 2 Clocl_3339 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 Clocl_3339 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_3339 IPR013324 RNA polymerase sigma factor, region 3/4-like Clocl_3339 IPR039425 RNA polymerase sigma-70 like Clocl_3339 IPR014284 RNA polymerase sigma-70 like domain Clocl_3339 IPR007627 RNA polymerase sigma-70 region 2 Clocl_3341 IPR011527 ABC transporter type 1, transmembrane domain Clocl_3341 IPR003593 AAA+ ATPase domain Clocl_3341 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_3341 IPR003439 ABC transporter-like Clocl_3341 IPR036640 ABC transporter type 1, transmembrane domain superfamily Clocl_3341 IPR039421 Type I protein exporter Clocl_3342 IPR017871 ABC transporter, conserved site Clocl_3342 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_3342 IPR039421 Type I protein exporter Clocl_3342 IPR036640 ABC transporter type 1, transmembrane domain superfamily Clocl_3342 IPR011527 ABC transporter type 1, transmembrane domain Clocl_3342 IPR003593 AAA+ ATPase domain Clocl_3342 IPR003439 ABC transporter-like Clocl_3343 IPR036390 Winged helix DNA-binding domain superfamily Clocl_3343 IPR000835 MarR-type HTH domain Clocl_3343 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_3344 IPR019810 Citrate synthase active site Clocl_3344 IPR024176 Citrate synthase, bacterial-type Clocl_3344 IPR036969 Citrate synthase superfamily Clocl_3344 IPR011278 2-methylcitrate synthase/citrate synthase type I Clocl_3344 IPR016142 Citrate synthase-like, large alpha subdomain Clocl_3344 IPR016143 Citrate synthase-like, small alpha subdomain Clocl_3344 IPR002020 Citrate synthase Clocl_3345 IPR005358 Putative zinc- or iron-chelating domain containing protein Clocl_3346 IPR035584 Amidophosphoribosyltransferase, N-terminal Clocl_3346 IPR000836 Phosphoribosyltransferase domain Clocl_3346 IPR029055 Nucleophile aminohydrolases, N-terminal Clocl_3346 IPR017932 Glutamine amidotransferase type 2 domain Clocl_3346 IPR029057 Phosphoribosyltransferase-like Clocl_3346 IPR005854 Amidophosphoribosyltransferase Clocl_3348 IPR011009 Protein kinase-like domain superfamily Clocl_3348 IPR005280 Homoserine kinase, type II Clocl_3348 IPR002575 Aminoglycoside phosphotransferase Clocl_3349 IPR016185 Pre-ATP-grasp domain superfamily Clocl_3349 IPR011761 ATP-grasp fold Clocl_3349 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain Clocl_3349 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily Clocl_3349 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain Clocl_3349 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain Clocl_3349 IPR011607 Methylglyoxal synthase-like domain Clocl_3349 IPR036914 Methylglyoxal synthase-like domain superfamily Clocl_3349 IPR006275 Carbamoyl-phosphate synthase, large subunit Clocl_3349 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain Clocl_3350 IPR023214 HAD superfamily Clocl_3350 IPR006379 HAD-superfamily hydrolase, subfamily IIB Clocl_3350 IPR036412 HAD-like superfamily Clocl_3350 IPR000150 Cof family Clocl_3352 IPR007405 Bacteriophage KVP40, Orf299 Clocl_3354 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Clocl_3354 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding Clocl_3354 IPR003660 HAMP domain Clocl_3354 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site Clocl_3354 IPR004090 Chemotaxis methyl-accepting receptor Clocl_3354 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily Clocl_3357 IPR036188 FAD/NAD(P)-binding domain superfamily Clocl_3357 IPR009051 Alpha-helical ferredoxin Clocl_3357 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain Clocl_3357 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Clocl_3357 IPR028261 Dihydroprymidine dehydrogenase domain II Clocl_3357 IPR023753 FAD/NAD(P)-binding domain Clocl_3359 IPR013325 RNA polymerase sigma factor, region 2 Clocl_3359 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_3359 IPR013324 RNA polymerase sigma factor, region 3/4-like Clocl_3359 IPR039425 RNA polymerase sigma-70 like Clocl_3359 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 Clocl_3359 IPR014296 RNA polymerase sigma-M, bacillaceae Clocl_3359 IPR007627 RNA polymerase sigma-70 region 2 Clocl_3359 IPR014284 RNA polymerase sigma-70 like domain Clocl_3359 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site Clocl_3360 IPR002524 Cation efflux protein Clocl_3360 IPR027470 Cation efflux protein, cytoplasmic domain Clocl_3360 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Clocl_3360 IPR027469 Cation efflux transmembrane domain superfamily Clocl_3361 IPR001137 Glycoside hydrolase family 11 Clocl_3361 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel Clocl_3361 IPR033123 Glycosyl hydrolases family 11 (GH11) domain Clocl_3361 IPR033119 Glycoside hydrolase family 11, active site 2 Clocl_3361 IPR018208 Glycoside hydrolase family 11, active site 1 Clocl_3361 IPR013319 Glycoside hydrolase family 11/12 Clocl_3361 IPR002509 NodB homology domain Clocl_3361 IPR008979 Galactose-binding-like domain superfamily Clocl_3361 IPR005084 Carbohydrate binding module family 6 Clocl_3361 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Clocl_3362 IPR031967 PhoR, single Cache-like domain Clocl_3362 IPR013767 PAS fold Clocl_3362 IPR035965 PAS domain superfamily Clocl_3362 IPR000014 PAS domain Clocl_3362 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Clocl_3362 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Clocl_3362 IPR005467 Histidine kinase domain Clocl_3362 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Clocl_3362 IPR003594 Histidine kinase/HSP90-like ATPase Clocl_3362 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clocl_3363 IPR011006 CheY-like superfamily Clocl_3363 IPR001867 OmpR/PhoB-type DNA-binding domain Clocl_3363 IPR016032 Signal transduction response regulator, C-terminal effector Clocl_3363 IPR001789 Signal transduction response regulator, receiver domain Clocl_3363 IPR039420 Transcriptional regulatory protein WalR-like Clocl_3363 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_3364 IPR003251 Rubrerythrin Clocl_3364 IPR024934 Rubredoxin-like domain Clocl_3364 IPR009078 Ferritin-like superfamily Clocl_3364 IPR009040 Ferritin-like diiron domain Clocl_3364 IPR012347 Ferritin-like Clocl_3365 IPR003824 Undecaprenyl-diphosphatase UppP Clocl_3366 IPR038078 PhoU-like domain superfamily Clocl_3366 IPR018445 Putative phosphate transport regulator Clocl_3367 IPR001204 Phosphate transporter Clocl_3368 IPR011397 Intramembrane metalloprotease YhfC Clocl_3382 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_3382 IPR014152 DNA helicase subunit AddA Clocl_3382 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type Clocl_3382 IPR000212 DNA helicase, UvrD/REP type Clocl_3382 IPR011335 Restriction endonuclease type II-like Clocl_3382 IPR014016 UvrD-like helicase, ATP-binding domain Clocl_3382 IPR034739 UvrD/AddA helicase, N-terminal Clocl_3382 IPR011604 Exonuclease, phage-type/RecB, C-terminal Clocl_3382 IPR014017 UvrD-like DNA helicase, C-terminal Clocl_3383 IPR014140 DNA helicase subunit AddB Clocl_3383 IPR014017 UvrD-like DNA helicase, C-terminal Clocl_3383 IPR000212 DNA helicase, UvrD/REP type Clocl_3383 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_3383 IPR011335 Restriction endonuclease type II-like Clocl_3383 IPR014016 UvrD-like helicase, ATP-binding domain Clocl_3383 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type Clocl_3387 IPR005074 Peptidase C39, bacteriocin processing Clocl_3387 IPR039421 Type I protein exporter Clocl_3387 IPR003439 ABC transporter-like Clocl_3387 IPR036640 ABC transporter type 1, transmembrane domain superfamily Clocl_3387 IPR011527 ABC transporter type 1, transmembrane domain Clocl_3387 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_3387 IPR003593 AAA+ ATPase domain Clocl_3387 IPR005897 Peptidase C39, ABC-type bacteriocin transporter Clocl_3387 IPR017871 ABC transporter, conserved site Clocl_3389 IPR002686 Transposase IS200-like Clocl_3389 IPR036515 Transposase IS200-like superfamily Clocl_3390 IPR042099 AMP-dependent synthetase-like superfamily Clocl_3390 IPR000873 AMP-dependent synthetase/ligase Clocl_3390 IPR020845 AMP-binding, conserved site Clocl_3390 IPR025110 AMP-binding enzyme, C-terminal domain Clocl_3391 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily Clocl_3391 IPR002569 Peptide methionine sulphoxide reductase MsrA Clocl_3391 IPR028427 Peptide methionine sulfoxide reductase Clocl_3391 IPR002579 Peptide methionine sulphoxide reductase MrsB Clocl_3391 IPR011057 Mss4-like superfamily Clocl_3393 IPR002347 Short-chain dehydrogenase/reductase SDR Clocl_3393 IPR036291 NAD(P)-binding domain superfamily Clocl_3393 IPR020904 Short-chain dehydrogenase/reductase, conserved site Clocl_3394 IPR013780 Glycosyl hydrolase, all-beta Clocl_3394 IPR014756 Immunoglobulin E-set Clocl_3394 IPR013783 Immunoglobulin-like fold Clocl_3394 IPR017853 Glycoside hydrolase superfamily Clocl_3394 IPR004193 Glycoside hydrolase, family 13, N-terminal Clocl_3394 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta Clocl_3394 IPR037439 1,4-alpha-glucan-branching enzyme Clocl_3394 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB Clocl_3394 IPR006047 Glycosyl hydrolase, family 13, catalytic domain Clocl_3395 IPR008969 Carboxypeptidase-like, regulatory domain superfamily Clocl_3395 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clocl_3395 IPR001956 Carbohydrate-binding module 3 Clocl_3395 IPR036966 Carbohydrate-binding module 3 superfamily Clocl_3395 IPR002102 Cellulosome anchoring protein, cohesin domain Clocl_3395 IPR002105 Dockerin type I repeat Clocl_3395 IPR016134 Dockerin domain Clocl_3395 IPR036439 Dockerin domain superfamily Clocl_3395 IPR018247 EF-Hand 1, calcium-binding site Clocl_3396 IPR042099 AMP-dependent synthetase-like superfamily Clocl_3396 IPR000873 AMP-dependent synthetase/ligase Clocl_3396 IPR020845 AMP-binding, conserved site Clocl_3398 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily Clocl_3398 IPR004090 Chemotaxis methyl-accepting receptor Clocl_3398 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site Clocl_3398 IPR003660 HAMP domain Clocl_3398 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Clocl_3398 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding Clocl_3399 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal Clocl_3399 IPR003346 Transposase, IS116/IS110/IS902 Clocl_3402 IPR033479 Double Cache domain 1 Clocl_3402 IPR003660 HAMP domain Clocl_3402 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Clocl_3402 IPR029151 Periplasmic sensor-like domain superfamily Clocl_3404 IPR023753 FAD/NAD(P)-binding domain Clocl_3404 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clocl_3404 IPR028261 Dihydroprymidine dehydrogenase domain II Clocl_3404 IPR036188 FAD/NAD(P)-binding domain superfamily Clocl_3404 IPR009051 Alpha-helical ferredoxin Clocl_3404 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 Clocl_3405 IPR006076 FAD dependent oxidoreductase Clocl_3405 IPR036188 FAD/NAD(P)-binding domain superfamily Clocl_3410 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase Clocl_3410 IPR001173 Glycosyltransferase 2-like Clocl_3410 IPR029044 Nucleotide-diphospho-sugar transferases Clocl_3411 IPR006076 FAD dependent oxidoreductase Clocl_3411 IPR023080 D-amino acid dehydrogenase DadA Clocl_3411 IPR036188 FAD/NAD(P)-binding domain superfamily Clocl_3414 IPR009040 Ferritin-like diiron domain Clocl_3414 IPR012347 Ferritin-like Clocl_3414 IPR041719 Ferritin, prokaryotic-type Clocl_3414 IPR001519 Ferritin Clocl_3414 IPR009078 Ferritin-like superfamily Clocl_3414 IPR008331 Ferritin/DPS protein domain Clocl_3417 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Clocl_3417 IPR002891 Adenylyl-sulfate kinase Clocl_3417 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain Clocl_3417 IPR031157 Tr-type G domain, conserved site Clocl_3417 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_3417 IPR011779 Sulphate adenylyltransferase, large subunit Clocl_3417 IPR000795 Transcription factor, GTP-binding domain Clocl_3417 IPR009000 Translation protein, beta-barrel domain superfamily Clocl_3417 IPR005225 Small GTP-binding protein domain Clocl_3418 IPR002500 Phosphoadenosine phosphosulphate reductase Clocl_3418 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clocl_3418 IPR011784 Sulphate adenylyltransferase, small subunit Clocl_3419 IPR011798 Adenosine 5'-phosphosulphate reductase Clocl_3419 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase Clocl_3419 IPR002500 Phosphoadenosine phosphosulphate reductase Clocl_3419 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clocl_3420 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site Clocl_3420 IPR012798 Cobalamin (vitamin B12) biosynthesis CobG-like Clocl_3420 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain Clocl_3420 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily Clocl_3420 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain Clocl_3421 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Clocl_3421 IPR015424 Pyridoxal phosphate-dependent transferase Clocl_3421 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme Clocl_3421 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Clocl_3422 IPR005330 MHYT domain Clocl_3422 IPR029787 Nucleotide cyclase Clocl_3422 IPR035919 EAL domain superfamily Clocl_3422 IPR001633 EAL domain Clocl_3422 IPR000160 GGDEF domain Clocl_3429 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_3429 IPR001034 DeoR-type HTH domain Clocl_3429 IPR013196 Helix-turn-helix, type 11 Clocl_3429 IPR028349 Protein PafC Clocl_3429 IPR026881 WYL domain Clocl_3429 IPR036390 Winged helix DNA-binding domain superfamily Clocl_3432 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_3432 IPR005650 BlaI transcriptional regulatory family Clocl_3432 IPR036390 Winged helix DNA-binding domain superfamily Clocl_3447 IPR036457 PPM-type phosphatase domain superfamily Clocl_3447 IPR001932 PPM-type phosphatase domain Clocl_3447 IPR014221 Sporulation stage II, protein E Clocl_3451 IPR002934 Polymerase, nucleotidyl transferase domain Clocl_3451 IPR025184 Domain of unknown function DUF4111 Clocl_3466 IPR001270 ClpA/B family Clocl_3466 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_3466 IPR003593 AAA+ ATPase domain Clocl_3466 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein Clocl_3466 IPR002611 IstB-like ATP-binding protein Clocl_3467 IPR009057 Homeobox-like domain superfamily Clocl_3467 IPR017895 Helix-turn-helix, IS408/IS1162 transposase-type Clocl_3467 IPR001584 Integrase, catalytic core Clocl_3467 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 Clocl_3467 IPR012337 Ribonuclease H-like superfamily Clocl_3467 IPR011991 ArsR-like helix-turn-helix domain Clocl_3484 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily Clocl_3484 IPR000644 CBS domain Clocl_3484 IPR006669 Magnesium transporter MgtE Clocl_3484 IPR038048 Magnesium transporter MgtE, transmembrane domain Clocl_3484 IPR038076 MgtE, N-terminal domain superfamily Clocl_3484 IPR006668 Magnesium transporter, MgtE intracellular domain Clocl_3484 IPR006667 SLC41 divalent cation transporters, integral membrane domain Clocl_3487 IPR003660 HAMP domain Clocl_3487 IPR029151 Periplasmic sensor-like domain superfamily Clocl_3487 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Clocl_3487 IPR033479 Double Cache domain 1 Clocl_3489 IPR020449 Transcription regulator HTH, AraC- type Clocl_3489 IPR011256 Regulatory factor, effector binding domain superfamily Clocl_3489 IPR010499 Bacterial transcription activator, effector binding Clocl_3489 IPR009057 Homeobox-like domain superfamily Clocl_3489 IPR018060 DNA binding HTH domain, AraC-type Clocl_3489 IPR018062 HTH domain AraC-type, conserved site Clocl_3489 IPR029442 GyrI-like small molecule binding domain Clocl_3490 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clocl_3490 IPR010233 Ubiquinone biosynthesis O-methyltransferase Clocl_3494 IPR004869 Membrane transport protein MMPL domain Clocl_3494 IPR000731 Sterol-sensing domain Clocl_3496 IPR011962 dCTP deaminase Clocl_3496 IPR029054 dUTPase-like Clocl_3496 IPR033704 dUTPase, trimeric Clocl_3496 IPR036157 dUTPase-like superfamily Clocl_3501 IPR006379 HAD-superfamily hydrolase, subfamily IIB Clocl_3501 IPR000150 Cof family Clocl_3501 IPR036412 HAD-like superfamily Clocl_3503 IPR007235 Glycosyl transferase, family 28, C-terminal Clocl_3503 IPR006326 UDP-glycosyltransferase, MGT Clocl_3509 IPR033479 Double Cache domain 1 Clocl_3509 IPR003660 HAMP domain Clocl_3509 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Clocl_3509 IPR029151 Periplasmic sensor-like domain superfamily Clocl_3509 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding Clocl_3510 IPR025246 Transposase IS30-like HTH domain Clocl_3510 IPR001584 Integrase, catalytic core Clocl_3510 IPR001598 Transposase, IS30, conserved site Clocl_3510 IPR036397 Ribonuclease H superfamily Clocl_3510 IPR012337 Ribonuclease H-like superfamily Clocl_3513 IPR003346 Transposase, IS116/IS110/IS902 Clocl_3513 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal Clocl_3515 IPR000182 GNAT domain Clocl_3515 IPR016181 Acyl-CoA N-acyltransferase Clocl_3519 IPR000620 EamA domain Clocl_3521 IPR029044 Nucleotide-diphospho-sugar transferases Clocl_3521 IPR013645 Glycosyl transferase, family 8, C-terminal Clocl_3521 IPR002495 Glycosyl transferase, family 8 Clocl_3523 IPR034291 Thiamine phosphate synthase Clocl_3523 IPR022998 Thiamine phosphate synthase/TenI Clocl_3523 IPR029056 Ribokinase-like Clocl_3523 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Clocl_3523 IPR013785 Aldolase-type TIM barrel Clocl_3523 IPR036206 Thiamin phosphate synthase superfamily Clocl_3523 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase Clocl_3524 IPR010976 Beta-phosphoglucomutase hydrolase Clocl_3524 IPR036412 HAD-like superfamily Clocl_3524 IPR006439 HAD hydrolase, subfamily IA Clocl_3524 IPR041492 Haloacid dehalogenase-like hydrolase Clocl_3524 IPR023214 HAD superfamily Clocl_3524 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Clocl_3525 IPR034291 Thiamine phosphate synthase Clocl_3525 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B Clocl_3525 IPR025747 ThiC-associated domain Clocl_3525 IPR037509 Phosphomethylpyrimidine synthase Clocl_3525 IPR022998 Thiamine phosphate synthase/TenI Clocl_3525 IPR013785 Aldolase-type TIM barrel Clocl_3525 IPR036206 Thiamin phosphate synthase superfamily Clocl_3525 IPR038521 ThiC/Bza superfamily Clocl_3526 IPR000417 Hydroxyethylthiazole kinase Clocl_3526 IPR029056 Ribokinase-like Clocl_3528 IPR037163 Spermidine synthase, tetramerisation domain superfamily Clocl_3528 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clocl_3528 IPR030374 Polyamine biosynthesis domain Clocl_3528 IPR035246 Spermidine synthase, tetramerisation domain Clocl_3528 IPR001045 Spermidine/spermine synthases Clocl_3536 IPR003593 AAA+ ATPase domain Clocl_3536 IPR015854 ABC transporter, lipoprotein release, LolD Clocl_3536 IPR017871 ABC transporter, conserved site Clocl_3536 IPR003439 ABC transporter-like Clocl_3536 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_3537 IPR003594 Histidine kinase/HSP90-like ATPase Clocl_3537 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clocl_3537 IPR005467 Histidine kinase domain Clocl_3537 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Clocl_3537 IPR011649 KaiB domain Clocl_3537 IPR023527 Adaptive-response sensory-kinase SasA Clocl_3537 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Clocl_3537 IPR036249 Thioredoxin-like superfamily Clocl_3537 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Clocl_3538 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_3538 IPR039420 Transcriptional regulatory protein WalR-like Clocl_3538 IPR001789 Signal transduction response regulator, receiver domain Clocl_3538 IPR016032 Signal transduction response regulator, C-terminal effector Clocl_3538 IPR001867 OmpR/PhoB-type DNA-binding domain Clocl_3538 IPR011006 CheY-like superfamily Clocl_3542 IPR006119 Resolvase, N-terminal catalytic domain Clocl_3542 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily Clocl_3542 IPR006120 Resolvase, HTH domain Clocl_3542 IPR006118 Recombinase, conserved site Clocl_3542 IPR009057 Homeobox-like domain superfamily Clocl_3549 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt Clocl_3553 IPR003370 Chromate transporter Clocl_3556 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_3556 IPR017871 ABC transporter, conserved site Clocl_3556 IPR003439 ABC transporter-like Clocl_3556 IPR003593 AAA+ ATPase domain Clocl_3558 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 Clocl_3558 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_3558 IPR019591 Mrp/NBP35 ATP-binding protein Clocl_3558 IPR000808 Mrp, conserved site Clocl_3559 IPR001279 Metallo-beta-lactamase Clocl_3559 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Clocl_3559 IPR022877 Protein of unknown funcion UPF0173 Clocl_3560 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Clocl_3560 IPR010223 ATP binding protein MinD, bacterial-type Clocl_3560 IPR025501 ATP binding protein MinD Clocl_3560 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_3563 IPR003136 Cytidylate kinase Clocl_3563 IPR011994 Cytidylate kinase domain Clocl_3563 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_3565 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal Clocl_3566 IPR013324 RNA polymerase sigma factor, region 3/4-like Clocl_3566 IPR002852 Uncharacterised protein family UPF0251 Clocl_3566 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_3568 IPR039506 SpoOB, alpha-helical domain Clocl_3568 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB Clocl_3568 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Clocl_3568 IPR033463 Single cache domain 3 Clocl_3568 IPR029151 Periplasmic sensor-like domain superfamily Clocl_3568 IPR000014 PAS domain Clocl_3568 IPR005467 Histidine kinase domain Clocl_3568 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clocl_3568 IPR003594 Histidine kinase/HSP90-like ATPase Clocl_3568 IPR035965 PAS domain superfamily Clocl_3569 IPR011006 CheY-like superfamily Clocl_3569 IPR007492 LytTR DNA-binding domain Clocl_3569 IPR001789 Signal transduction response regulator, receiver domain Clocl_3576 IPR037294 ABC transporter, BtuC-like Clocl_3576 IPR000522 ABC transporter, permease protein, BtuC-like Clocl_3578 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily Clocl_3578 IPR003722 Cobalamin biosynthesis precorrin-8X methylmutase CobH/CbiC Clocl_3579 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain Clocl_3579 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_3579 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR Clocl_3580 IPR011698 CobB/CobQ-like glutamine amidotransferase Clocl_3580 IPR004459 Cobyric acid synthase CobQ Clocl_3580 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_3580 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Clocl_3580 IPR017929 CobB/CobQ glutamine amidotransferase Clocl_3580 IPR033949 Cobyric acid synthase, glutamine amidotransferase type 1 Clocl_3580 IPR029062 Class I glutamine amidotransferase-like Clocl_3581 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Clocl_3581 IPR015424 Pyridoxal phosphate-dependent transferase Clocl_3581 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Clocl_3581 IPR005860 L-threonine-O-3-phosphate decarboxylase Clocl_3581 IPR004839 Aminotransferase, class I/classII Clocl_3581 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site Clocl_3582 IPR004485 Cobalamin biosynthesis CobD/CbiB Clocl_3583 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_3583 IPR011698 CobB/CobQ-like glutamine amidotransferase Clocl_3583 IPR017929 CobB/CobQ glutamine amidotransferase Clocl_3583 IPR029062 Class I glutamine amidotransferase-like Clocl_3583 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA Clocl_3583 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Clocl_3584 IPR035996 Tetrapyrrole methylase superfamily Clocl_3584 IPR014777 Tetrapyrrole methylase, subdomain 1 Clocl_3584 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase Clocl_3584 IPR006365 Cobalamin (vitamin B12) biosynthesis CobL/Precorrin-6Y C(5,15)-methyltransferase Clocl_3584 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit Clocl_3584 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clocl_3584 IPR000878 Tetrapyrrole methylase Clocl_3586 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Clocl_3586 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Clocl_3586 IPR015424 Pyridoxal phosphate-dependent transferase Clocl_3586 IPR005814 Aminotransferase class-III Clocl_3586 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase Clocl_3587 IPR013785 Aldolase-type TIM barrel Clocl_3587 IPR030656 Delta-aminolevulinic acid dehydratase, active site Clocl_3587 IPR001731 Delta-aminolevulinic acid dehydratase Clocl_3588 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site Clocl_3588 IPR014776 Tetrapyrrole methylase, subdomain 2 Clocl_3588 IPR014777 Tetrapyrrole methylase, subdomain 1 Clocl_3588 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase Clocl_3588 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily Clocl_3588 IPR035996 Tetrapyrrole methylase superfamily Clocl_3588 IPR000878 Tetrapyrrole methylase Clocl_3588 IPR006366 Uroporphyrin-III C-methyltransferase Clocl_3589 IPR022417 Porphobilinogen deaminase, N-terminal Clocl_3589 IPR000860 Porphobilinogen deaminase Clocl_3589 IPR022418 Porphobilinogen deaminase, C-terminal Clocl_3589 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily Clocl_3589 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site Clocl_3590 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal Clocl_3590 IPR018214 Glutamyl-tRNA reductase, conserved site Clocl_3590 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily Clocl_3590 IPR036291 NAD(P)-binding domain superfamily Clocl_3590 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase Clocl_3590 IPR006367 Sirohaem synthase, N-terminal Clocl_3590 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase Clocl_3591 IPR000878 Tetrapyrrole methylase Clocl_3591 IPR035996 Tetrapyrrole methylase superfamily Clocl_3591 IPR014777 Tetrapyrrole methylase, subdomain 1 Clocl_3591 IPR014776 Tetrapyrrole methylase, subdomain 2 Clocl_3591 IPR006363 Precorrin-3B C17-methyltransferase domain Clocl_3592 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase Clocl_3592 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase Clocl_3592 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal Clocl_3592 IPR018214 Glutamyl-tRNA reductase, conserved site Clocl_3592 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily Clocl_3592 IPR036291 NAD(P)-binding domain superfamily Clocl_3592 IPR006367 Sirohaem synthase, N-terminal Clocl_3593 IPR036518 CobE/GbiG C-terminal domain superfamily Clocl_3593 IPR021745 Cobalamin biosynthesis central region Clocl_3593 IPR002750 CobE/GbiG C-terminal domain Clocl_3593 IPR038029 GbiG N-terminal domain superfamily Clocl_3593 IPR021744 Cobalamin synthesis G, N-terminal Clocl_3594 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site Clocl_3594 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase Clocl_3594 IPR014776 Tetrapyrrole methylase, subdomain 2 Clocl_3594 IPR014777 Tetrapyrrole methylase, subdomain 1 Clocl_3594 IPR035996 Tetrapyrrole methylase superfamily Clocl_3594 IPR000878 Tetrapyrrole methylase Clocl_3595 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site Clocl_3595 IPR006364 Precorrin-2 C(20)-methyltransferase domain Clocl_3595 IPR012382 Precorrin-2 C(20)-methyltransferase Clocl_3595 IPR006363 Precorrin-3B C17-methyltransferase domain Clocl_3595 IPR014776 Tetrapyrrole methylase, subdomain 2 Clocl_3595 IPR014777 Tetrapyrrole methylase, subdomain 1 Clocl_3595 IPR035996 Tetrapyrrole methylase superfamily Clocl_3595 IPR000878 Tetrapyrrole methylase Clocl_3596 IPR036074 CbiD superfamily Clocl_3596 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD Clocl_3597 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_3597 IPR005876 Cobalt transport protein ATP-binding subunit Clocl_3597 IPR015856 ABC transporter, CbiO/EcfA subunit Clocl_3597 IPR003439 ABC transporter-like Clocl_3597 IPR017871 ABC transporter, conserved site Clocl_3597 IPR003593 AAA+ ATPase domain Clocl_3598 IPR024919 ECF transporter transmembrane protein EcfT Clocl_3598 IPR003339 ABC/ECF transporter, transmembrane component Clocl_3599 IPR003705 Cobalt transport protein CbiN Clocl_3600 IPR002751 Metal transport protein CbiM/NikMN Clocl_3600 IPR018024 Cobalamin (vitamin B12) transport protein CbiM Clocl_3613 IPR013324 RNA polymerase sigma factor, region 3/4-like Clocl_3613 IPR013325 RNA polymerase sigma factor, region 2 Clocl_3613 IPR007627 RNA polymerase sigma-70 region 2 Clocl_3613 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site Clocl_3613 IPR014284 RNA polymerase sigma-70 like domain Clocl_3613 IPR039425 RNA polymerase sigma-70 like Clocl_3613 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_3613 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 Clocl_3615 IPR000477 Reverse transcriptase domain Clocl_3619 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_3619 IPR038454 DnaA, N-terminal domain superfamily Clocl_3619 IPR024633 DnaA N-terminal domain Clocl_3619 IPR013159 Chromosomal replication initiator, DnaA C-terminal Clocl_3619 IPR013317 Chromosomal replication initiator protein DnaA Clocl_3619 IPR018312 Chromosomal replication control, initiator DnaA, conserved site Clocl_3619 IPR020591 Chromosomal replication control, initiator DnaA-like Clocl_3619 IPR010921 Trp repressor/replication initiator Clocl_3619 IPR001957 Chromosomal replication control, initiator DnaA Clocl_3619 IPR003593 AAA+ ATPase domain Clocl_3620 IPR012337 Ribonuclease H-like superfamily Clocl_3620 IPR001584 Integrase, catalytic core Clocl_3620 IPR017894 HTH domain, IS21 transposase-type Clocl_3622 IPR004473 Restriction endonuclease, type I, HsdR Clocl_3622 IPR040980 SWI2/SNF2 ATPase Clocl_3622 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal Clocl_3622 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_3622 IPR014001 Helicase superfamily 1/2, ATP-binding domain Clocl_3622 IPR021810 Protein of unknown function DUF3387 Clocl_3623 IPR000055 Restriction endonuclease, type I, HsdS Clocl_3625 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily Clocl_3625 IPR003356 DNA methylase, adenine-specific Clocl_3625 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clocl_3630 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Clocl_3630 IPR003594 Histidine kinase/HSP90-like ATPase Clocl_3630 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Clocl_3630 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Clocl_3630 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clocl_3630 IPR005467 Histidine kinase domain Clocl_3631 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_3631 IPR039420 Transcriptional regulatory protein WalR-like Clocl_3631 IPR001789 Signal transduction response regulator, receiver domain Clocl_3631 IPR016032 Signal transduction response regulator, C-terminal effector Clocl_3631 IPR001867 OmpR/PhoB-type DNA-binding domain Clocl_3631 IPR011006 CheY-like superfamily Clocl_3634 IPR016181 Acyl-CoA N-acyltransferase Clocl_3634 IPR000182 GNAT domain Clocl_3637 IPR001957 Chromosomal replication control, initiator DnaA Clocl_3637 IPR020591 Chromosomal replication control, initiator DnaA-like Clocl_3637 IPR018312 Chromosomal replication control, initiator DnaA, conserved site Clocl_3637 IPR013317 Chromosomal replication initiator protein DnaA Clocl_3637 IPR013159 Chromosomal replication initiator, DnaA C-terminal Clocl_3637 IPR024633 DnaA N-terminal domain Clocl_3637 IPR038454 DnaA, N-terminal domain superfamily Clocl_3637 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_3637 IPR010921 Trp repressor/replication initiator Clocl_3637 IPR003593 AAA+ ATPase domain Clocl_3638 IPR001584 Integrase, catalytic core Clocl_3638 IPR017894 HTH domain, IS21 transposase-type Clocl_3638 IPR012337 Ribonuclease H-like superfamily Clocl_3640 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clocl_3640 IPR001091 Restriction/modification DNA-methylase Clocl_3640 IPR002052 DNA methylase, N-6 adenine-specific, conserved site Clocl_3640 IPR002941 DNA methylase N-4/N-6 Clocl_3640 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class Clocl_3641 IPR014001 Helicase superfamily 1/2, ATP-binding domain Clocl_3641 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_3641 IPR038718 SNF2-like, N-terminal domain superfamily Clocl_3641 IPR000330 SNF2-related, N-terminal domain Clocl_3641 IPR001650 Helicase, C-terminal Clocl_3647 IPR009057 Homeobox-like domain superfamily Clocl_3647 IPR002514 Transposase IS3/IS911family Clocl_3649 IPR000477 Reverse transcriptase domain Clocl_3651 IPR000477 Reverse transcriptase domain Clocl_3653 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_3653 IPR013324 RNA polymerase sigma factor, region 3/4-like Clocl_3653 IPR013325 RNA polymerase sigma factor, region 2 Clocl_3653 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 Clocl_3653 IPR007627 RNA polymerase sigma-70 region 2 Clocl_3653 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site Clocl_3653 IPR039425 RNA polymerase sigma-70 like Clocl_3653 IPR014284 RNA polymerase sigma-70 like domain Clocl_3656 IPR025827 Recombinase zinc beta ribbon domain Clocl_3656 IPR038109 DNA-binding recombinase domain superfamily Clocl_3656 IPR011109 DNA-binding recombinase domain Clocl_3658 IPR006119 Resolvase, N-terminal catalytic domain Clocl_3658 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily Clocl_3658 IPR006120 Resolvase, HTH domain Clocl_3658 IPR006118 Recombinase, conserved site Clocl_3658 IPR009057 Homeobox-like domain superfamily Clocl_3660 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily Clocl_3660 IPR002502 N-acetylmuramoyl-L-alanine amidase domain Clocl_3660 IPR018392 LysM domain Clocl_3660 IPR036779 LysM domain superfamily Clocl_3660 IPR002477 Peptidoglycan binding-like Clocl_3660 IPR036365 PGBD-like superfamily Clocl_3660 IPR036366 PGBD superfamily Clocl_3661 IPR006480 Bacteriophage holin family Clocl_3678 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_3678 IPR003439 ABC transporter-like Clocl_3678 IPR003593 AAA+ ATPase domain Clocl_3680 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Clocl_3680 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal Clocl_3680 IPR025201 Sensor protein KdpD, transmembrane domain Clocl_3680 IPR038318 KdpD, transmembrane domain superfamily Clocl_3680 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Clocl_3680 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Clocl_3680 IPR029016 GAF-like domain superfamily Clocl_3680 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clocl_3680 IPR003594 Histidine kinase/HSP90-like ATPase Clocl_3680 IPR005467 Histidine kinase domain Clocl_3681 IPR039420 Transcriptional regulatory protein WalR-like Clocl_3681 IPR011006 CheY-like superfamily Clocl_3681 IPR001789 Signal transduction response regulator, receiver domain Clocl_3681 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_3681 IPR001867 OmpR/PhoB-type DNA-binding domain Clocl_3682 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain Clocl_3682 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain Clocl_3682 IPR017782 Hydroxyacylglutathione hydrolase Clocl_3682 IPR001279 Metallo-beta-lactamase Clocl_3682 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Clocl_3687 IPR009057 Homeobox-like domain superfamily Clocl_3687 IPR002514 Transposase IS3/IS911family Clocl_3689 IPR032806 H repeat-associated protein, N-terminal Clocl_3689 IPR002559 Transposase, IS4-like Clocl_3691 IPR000477 Reverse transcriptase domain Clocl_3693 IPR001872 Peptidase A8, signal peptidase II Clocl_3694 IPR023298 P-type ATPase, transmembrane domain superfamily Clocl_3694 IPR008250 P-type ATPase, A domain superfamily Clocl_3694 IPR036412 HAD-like superfamily Clocl_3694 IPR023214 HAD superfamily Clocl_3694 IPR017969 Heavy-metal-associated, conserved site Clocl_3694 IPR006121 Heavy metal-associated domain, HMA Clocl_3694 IPR036163 Heavy metal-associated domain superfamily Clocl_3694 IPR027256 P-type ATPase, subfamily IB Clocl_3694 IPR001757 P-type ATPase Clocl_3694 IPR023299 P-type ATPase, cytoplasmic domain N Clocl_3694 IPR018303 P-type ATPase, phosphorylation site Clocl_3695 IPR011991 ArsR-like helix-turn-helix domain Clocl_3695 IPR018334 ArsR-type transcription regulator, HTH motif Clocl_3695 IPR036390 Winged helix DNA-binding domain superfamily Clocl_3695 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_3695 IPR001845 HTH ArsR-type DNA-binding domain Clocl_3697 IPR038109 DNA-binding recombinase domain superfamily Clocl_3697 IPR011109 DNA-binding recombinase domain Clocl_3697 IPR025827 Recombinase zinc beta ribbon domain Clocl_3699 IPR009057 Homeobox-like domain superfamily Clocl_3699 IPR006118 Recombinase, conserved site Clocl_3699 IPR006119 Resolvase, N-terminal catalytic domain Clocl_3699 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily Clocl_3699 IPR006120 Resolvase, HTH domain Clocl_3701 IPR036779 LysM domain superfamily Clocl_3701 IPR002502 N-acetylmuramoyl-L-alanine amidase domain Clocl_3701 IPR018392 LysM domain Clocl_3701 IPR036366 PGBD superfamily Clocl_3701 IPR036365 PGBD-like superfamily Clocl_3701 IPR002477 Peptidoglycan binding-like Clocl_3701 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily Clocl_3702 IPR006480 Bacteriophage holin family Clocl_3717 IPR001907 ATP-dependent Clp protease proteolytic subunit Clocl_3717 IPR029045 ClpP/crotonase-like domain superfamily Clocl_3717 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA Clocl_3717 IPR033135 ClpP, histidine active site Clocl_3718 IPR006944 Bacteriophage/Gene transfer agent portal protein Clocl_3719 IPR036390 Winged helix DNA-binding domain superfamily Clocl_3719 IPR005021 Terminase large subunit, Lambdalikevirus-type Clocl_3719 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_3726 IPR002052 DNA methylase, N-6 adenine-specific, conserved site Clocl_3726 IPR001091 Restriction/modification DNA-methylase Clocl_3726 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clocl_3726 IPR002941 DNA methylase N-4/N-6 Clocl_3727 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clocl_3727 IPR001091 Restriction/modification DNA-methylase Clocl_3727 IPR002052 DNA methylase, N-6 adenine-specific, conserved site Clocl_3727 IPR002941 DNA methylase N-4/N-6 Clocl_3736 IPR003497 BRO N-terminal domain Clocl_3736 IPR018876 Bacteriophage P22, antirepressor protein, C-terminal Clocl_3737 IPR002562 3'-5' exonuclease domain Clocl_3737 IPR012337 Ribonuclease H-like superfamily Clocl_3737 IPR029060 PIN-like domain superfamily Clocl_3737 IPR008918 Helix-hairpin-helix motif, class 2 Clocl_3737 IPR018320 DNA polymerase 1 Clocl_3737 IPR020045 DNA polymerase I-like, H3TH domain Clocl_3737 IPR002421 5'-3' exonuclease, N-terminal Clocl_3737 IPR001098 DNA-directed DNA polymerase, family A, palm domain Clocl_3737 IPR019760 DNA-directed DNA polymerase, family A, conserved site Clocl_3737 IPR002298 DNA polymerase A Clocl_3737 IPR036397 Ribonuclease H superfamily Clocl_3737 IPR036279 5'-3' exonuclease, C-terminal domain superfamily Clocl_3737 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal Clocl_3745 IPR013324 RNA polymerase sigma factor, region 3/4-like Clocl_3745 IPR013325 RNA polymerase sigma factor, region 2 Clocl_3745 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 Clocl_3745 IPR007627 RNA polymerase sigma-70 region 2 Clocl_3745 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site Clocl_3745 IPR014284 RNA polymerase sigma-70 like domain Clocl_3745 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_3745 IPR039425 RNA polymerase sigma-70 like Clocl_3749 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clocl_3749 IPR012340 Nucleic acid-binding, OB-fold Clocl_3749 IPR030390 RNA methyltransferase TrmA, active site Clocl_3749 IPR002792 TRAM domain Clocl_3749 IPR010280 (Uracil-5)-methyltransferase family Clocl_3754 IPR036249 Thioredoxin-like superfamily Clocl_3754 IPR006504 Transcriptional regulator Spx/MgsR Clocl_3754 IPR006660 Arsenate reductase-like Clocl_3755 IPR021729 Domain of unknown function DUF3298 Clocl_3755 IPR025303 Deacetylase PdaC Clocl_3755 IPR037126 PdaC/RsiV-like superfamily Clocl_3756 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site Clocl_3756 IPR039425 RNA polymerase sigma-70 like Clocl_3756 IPR014284 RNA polymerase sigma-70 like domain Clocl_3756 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_3756 IPR007627 RNA polymerase sigma-70 region 2 Clocl_3756 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 Clocl_3756 IPR013325 RNA polymerase sigma factor, region 2 Clocl_3756 IPR013324 RNA polymerase sigma factor, region 3/4-like Clocl_3758 IPR029510 Aldehyde dehydrogenase, glutamic acid active site Clocl_3758 IPR016160 Aldehyde dehydrogenase, cysteine active site Clocl_3758 IPR016163 Aldehyde dehydrogenase, C-terminal Clocl_3758 IPR016161 Aldehyde/histidinol dehydrogenase Clocl_3758 IPR015590 Aldehyde dehydrogenase domain Clocl_3758 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent Clocl_3758 IPR016162 Aldehyde dehydrogenase, N-terminal Clocl_3759 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA Clocl_3759 IPR018211 Alcohol dehydrogenase, iron-type, conserved site Clocl_3759 IPR039697 Iron-type alcohol dehydrogenase-like Clocl_3759 IPR013460 Lactaldehyde reductase Clocl_3760 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Clocl_3760 IPR001279 Metallo-beta-lactamase Clocl_3760 IPR017782 Hydroxyacylglutathione hydrolase Clocl_3760 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain Clocl_3760 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain Clocl_3762 IPR003593 AAA+ ATPase domain Clocl_3762 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_3762 IPR011704 ATPase, dynein-related, AAA domain Clocl_3762 IPR021961 Protein of unknown function DUF3578 Clocl_3765 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_3765 IPR017871 ABC transporter, conserved site Clocl_3765 IPR003439 ABC transporter-like Clocl_3765 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type Clocl_3765 IPR003593 AAA+ ATPase domain Clocl_3766 IPR035906 MetI-like superfamily Clocl_3766 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Clocl_3766 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain Clocl_3767 IPR018313 Solute-binding protein family 3, conserved site Clocl_3767 IPR001320 Ionotropic glutamate receptor Clocl_3767 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Clocl_3769 IPR001387 Cro/C1-type helix-turn-helix domain Clocl_3769 IPR010982 Lambda repressor-like, DNA-binding domain superfamily Clocl_3771 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_3771 IPR023546 Methylated-DNA--protein-cysteine methyltransferase Clocl_3771 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily Clocl_3771 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Clocl_3771 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding Clocl_3771 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain Clocl_3771 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site Clocl_3774 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Clocl_3774 IPR018313 Solute-binding protein family 3, conserved site Clocl_3774 IPR001320 Ionotropic glutamate receptor Clocl_3775 IPR003439 ABC transporter-like Clocl_3775 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type Clocl_3775 IPR003593 AAA+ ATPase domain Clocl_3775 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_3775 IPR017871 ABC transporter, conserved site Clocl_3776 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Clocl_3776 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain Clocl_3776 IPR035906 MetI-like superfamily Clocl_3777 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain Clocl_3777 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Clocl_3777 IPR035906 MetI-like superfamily Clocl_3779 IPR001207 Transposase, mutator type Clocl_3783 IPR004872 Lipoprotein NlpA family Clocl_3784 IPR035906 MetI-like superfamily Clocl_3784 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Clocl_3785 IPR018449 NIL domain Clocl_3785 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_3785 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain Clocl_3785 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal Clocl_3785 IPR017871 ABC transporter, conserved site Clocl_3785 IPR003439 ABC transporter-like Clocl_3785 IPR026253 Methionine import ATP-binding protein MetN Clocl_3785 IPR003593 AAA+ ATPase domain Clocl_3786 IPR036390 Winged helix DNA-binding domain superfamily Clocl_3786 IPR030489 Transcription regulator Rrf2-type, conserved site Clocl_3786 IPR000944 Transcription regulator Rrf2-type Clocl_3786 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_3788 IPR000510 Nitrogenase/oxidoreductase, component 1 Clocl_3788 IPR000318 Nitrogenase component 1, conserved site Clocl_3788 IPR005973 Nitrogenase MoFe cofactor biosynthesis protein NifE Clocl_3789 IPR000510 Nitrogenase/oxidoreductase, component 1 Clocl_3789 IPR005972 Nitrogenase molybdenum-iron protein alpha chain Clocl_3789 IPR000318 Nitrogenase component 1, conserved site Clocl_3789 IPR010143 Nitrogenase component 1, alpha chain Clocl_3792 IPR001270 ClpA/B family Clocl_3792 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein Clocl_3792 IPR002611 IstB-like ATP-binding protein Clocl_3792 IPR003593 AAA+ ATPase domain Clocl_3792 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_3794 IPR001207 Transposase, mutator type Clocl_3796 IPR006143 RND efflux pump, membrane fusion protein Clocl_3796 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Clocl_3797 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_3797 IPR017871 ABC transporter, conserved site Clocl_3797 IPR003439 ABC transporter-like Clocl_3797 IPR003593 AAA+ ATPase domain Clocl_3801 IPR036390 Winged helix DNA-binding domain superfamily Clocl_3801 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_3801 IPR005149 Transcription regulator PadR, N-terminal Clocl_3806 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal Clocl_3806 IPR003346 Transposase, IS116/IS110/IS902 Clocl_3810 IPR011698 CobB/CobQ-like glutamine amidotransferase Clocl_3810 IPR029062 Class I glutamine amidotransferase-like Clocl_3810 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_3810 IPR017929 CobB/CobQ glutamine amidotransferase Clocl_3810 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA Clocl_3810 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Clocl_3811 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clocl_3811 IPR041698 Methyltransferase domain 25 Clocl_3812 IPR036013 Band 7/SPFH domain superfamily Clocl_3812 IPR033880 SPFH domain, YdjI-like Clocl_3813 IPR011055 Duplicated hybrid motif Clocl_3813 IPR018392 LysM domain Clocl_3813 IPR016047 Peptidase M23 Clocl_3816 IPR012338 Beta-lactamase/transpeptidase-like Clocl_3816 IPR001264 Glycosyl transferase, family 51 Clocl_3816 IPR023346 Lysozyme-like domain superfamily Clocl_3816 IPR001460 Penicillin-binding protein, transpeptidase Clocl_3816 IPR036950 Penicillin binding protein transglycosylase domain Clocl_3818 IPR005085 Carbohydrate binding module family 25 Clocl_3818 IPR003838 ABC transporter permease protein domain Clocl_3818 IPR025857 MacB-like periplasmic core domain Clocl_3820 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_3820 IPR017871 ABC transporter, conserved site Clocl_3820 IPR003439 ABC transporter-like Clocl_3820 IPR003593 AAA+ ATPase domain Clocl_3823 IPR019797 Glutamate 5-kinase, conserved site Clocl_3823 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase Clocl_3823 IPR011529 Glutamate 5-kinase Clocl_3823 IPR036393 Acetylglutamate kinase-like superfamily Clocl_3823 IPR001057 Glutamate/acetylglutamate kinase Clocl_3823 IPR041739 Glutamate-5-kinase domain Clocl_3823 IPR001048 Aspartate/glutamate/uridylate kinase Clocl_3824 IPR035940 CAP superfamily Clocl_3824 IPR014044 CAP domain Clocl_3824 IPR014258 CAP domain, YkwD-like Clocl_3832 IPR033941 3-Isopropylmalate dehydratase, catalytic domain Clocl_3832 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 Clocl_3832 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain Clocl_3832 IPR018136 Aconitase family, 4Fe-4S cluster binding site Clocl_3832 IPR036008 Aconitase, iron-sulfur domain Clocl_3832 IPR011826 Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic Clocl_3832 IPR006251 Homoaconitase/3-isopropylmalate dehydratase, large subunit Clocl_3833 IPR036969 Citrate synthase superfamily Clocl_3833 IPR011278 2-methylcitrate synthase/citrate synthase type I Clocl_3833 IPR016142 Citrate synthase-like, large alpha subdomain Clocl_3833 IPR016143 Citrate synthase-like, small alpha subdomain Clocl_3833 IPR002020 Citrate synthase Clocl_3833 IPR019810 Citrate synthase active site Clocl_3833 IPR024176 Citrate synthase, bacterial-type Clocl_3834 IPR008920 Transcription regulator FadR/GntR, C-terminal Clocl_3834 IPR036390 Winged helix DNA-binding domain superfamily Clocl_3834 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_3834 IPR000524 Transcription regulator HTH, GntR Clocl_3834 IPR011711 GntR, C-terminal Clocl_3834 IPR000485 AsnC-type HTH domain Clocl_3835 IPR007383 Protein of unknown function DUF445 Clocl_3835 IPR016991 Protein of unknown function UCP032178 Clocl_3838 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Clocl_3838 IPR020568 Ribosomal protein S5 domain 2-type fold Clocl_3838 IPR027065 Lon protease Clocl_3838 IPR008269 Peptidase S16, Lon proteolytic domain Clocl_3838 IPR041699 Lon protease, AAA domain Clocl_3840 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB Clocl_3840 IPR000905 Gcp-like domain Clocl_3841 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE Clocl_3841 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_3842 IPR006680 Amidohydrolase-related Clocl_3842 IPR011059 Metal-dependent hydrolase, composite domain superfamily Clocl_3842 IPR032466 Metal-dependent hydrolase Clocl_3842 IPR006679 Adenine deaminase Clocl_3842 IPR026912 Adenine deaminase C-terminal domain Clocl_3845 IPR003593 AAA+ ATPase domain Clocl_3845 IPR041569 AAA ATPase, AAA+ lid domain Clocl_3845 IPR003960 ATPase, AAA-type, conserved site Clocl_3845 IPR005936 Peptidase, FtsH Clocl_3845 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_3845 IPR000642 Peptidase M41 Clocl_3845 IPR037219 Peptidase M41-like Clocl_3845 IPR003959 ATPase, AAA-type, core Clocl_3852 IPR001207 Transposase, mutator type Clocl_3854 IPR012544 Bacterial Pleckstrin homology domain Clocl_3854 IPR037063 Bacterial Pleckstrin homology domain superfamily Clocl_3857 IPR020568 Ribosomal protein S5 domain 2-type fold Clocl_3857 IPR000754 Ribosomal protein S9 Clocl_3857 IPR023035 Ribosomal protein S9, bacterial/plastid Clocl_3857 IPR020574 Ribosomal protein S9, conserved site Clocl_3857 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Clocl_3858 IPR023563 Ribosomal protein L13, conserved site Clocl_3858 IPR005822 Ribosomal protein L13 Clocl_3858 IPR036899 Ribosomal protein L13 superfamily Clocl_3858 IPR005823 Ribosomal protein L13, bacterial-type Clocl_3859 IPR020095 Pseudouridine synthase I, TruA, C-terminal Clocl_3859 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain Clocl_3859 IPR001406 Pseudouridine synthase I, TruA Clocl_3859 IPR020103 Pseudouridine synthase, catalytic domain superfamily Clocl_3860 IPR004654 Glucokinase ROK Clocl_3860 IPR000600 ROK family Clocl_3861 IPR024919 ECF transporter transmembrane protein EcfT Clocl_3861 IPR003339 ABC/ECF transporter, transmembrane component Clocl_3862 IPR017871 ABC transporter, conserved site Clocl_3862 IPR003593 AAA+ ATPase domain Clocl_3862 IPR015856 ABC transporter, CbiO/EcfA subunit Clocl_3862 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_3862 IPR030946 Energy-coupling factor transporter ATP-binding protein EcfA2 Clocl_3862 IPR003439 ABC transporter-like Clocl_3863 IPR007848 Methyltransferase small domain Clocl_3863 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clocl_3864 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_3864 IPR030947 Energy-coupling factor transporter ATP-binding protein EcfA1 Clocl_3864 IPR015856 ABC transporter, CbiO/EcfA subunit Clocl_3864 IPR017871 ABC transporter, conserved site Clocl_3864 IPR003439 ABC transporter-like Clocl_3864 IPR003593 AAA+ ATPase domain Clocl_3865 IPR036373 Ribosomal protein L17 superfamily Clocl_3865 IPR000456 Ribosomal protein L17 Clocl_3866 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type Clocl_3866 IPR011262 DNA-directed RNA polymerase, insert domain Clocl_3866 IPR036643 DNA-directed RNA polymerase, insert domain superfamily Clocl_3866 IPR011773 DNA-directed RNA polymerase, alpha subunit Clocl_3866 IPR011260 RNA polymerase, alpha subunit, C-terminal Clocl_3866 IPR036603 RNA polymerase, RBP11-like subunit Clocl_3867 IPR001912 Ribosomal protein S4/S9, N-terminal Clocl_3867 IPR018079 Ribosomal protein S4, conserved site Clocl_3867 IPR002942 RNA-binding S4 domain Clocl_3867 IPR036986 RNA-binding S4 domain superfamily Clocl_3867 IPR022801 Ribosomal protein S4/S9 Clocl_3867 IPR005709 Ribosomal protein S4, bacterial-type Clocl_3868 IPR001971 Ribosomal protein S11 Clocl_3868 IPR019981 Ribosomal protein S11, bacterial-type Clocl_3868 IPR018102 Ribosomal S11, conserved site Clocl_3868 IPR036967 Ribosomal protein S11 superfamily Clocl_3869 IPR018269 Ribosomal protein S13, conserved site Clocl_3869 IPR019980 Ribosomal protein S13, bacterial-type Clocl_3869 IPR027437 30s ribosomal protein S13, C-terminal Clocl_3869 IPR001892 Ribosomal protein S13 Clocl_3869 IPR010979 Ribosomal protein S13-like, H2TH Clocl_3870 IPR000473 Ribosomal protein L36 Clocl_3870 IPR035977 Ribosomal protein L36 superfamily Clocl_3871 IPR012340 Nucleic acid-binding, OB-fold Clocl_3871 IPR006196 RNA-binding domain, S1, IF1 type Clocl_3871 IPR022967 RNA-binding domain, S1 Clocl_3871 IPR004368 Translation initiation factor IF-1 Clocl_3873 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 Clocl_3873 IPR036005 Creatinase/aminopeptidase-like Clocl_3873 IPR001714 Peptidase M24, methionine aminopeptidase Clocl_3873 IPR000994 Peptidase M24 Clocl_3874 IPR006259 Adenylate kinase subfamily Clocl_3874 IPR000850 Adenylate kinase/UMP-CMP kinase Clocl_3874 IPR033690 Adenylate kinase, conserved site Clocl_3874 IPR007862 Adenylate kinase, active site lid domain Clocl_3874 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_3875 IPR023201 SecY domain superfamily Clocl_3875 IPR002208 SecY/SEC61-alpha family Clocl_3875 IPR026593 Protein translocase subunit SecY Clocl_3875 IPR030659 SecY conserved site Clocl_3876 IPR036227 Ribosomal L18e/L15P superfamily Clocl_3876 IPR030878 Ribosomal protein L15 Clocl_3876 IPR021131 Ribosomal protein L18e/L15P Clocl_3876 IPR005749 Ribosomal protein L15, bacterial-type Clocl_3877 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain Clocl_3877 IPR005996 Ribosomal protein L30, bacterial-type Clocl_3877 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily Clocl_3878 IPR005712 Ribosomal protein S5, bacterial-type Clocl_3878 IPR000851 Ribosomal protein S5 Clocl_3878 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Clocl_3878 IPR013810 Ribosomal protein S5, N-terminal Clocl_3878 IPR018192 Ribosomal protein S5, N-terminal, conserved site Clocl_3878 IPR005324 Ribosomal protein S5, C-terminal Clocl_3878 IPR020568 Ribosomal protein S5 domain 2-type fold Clocl_3879 IPR005484 Ribosomal protein L18 Clocl_3879 IPR004389 Ribosomal protein L18, bacterial-type Clocl_3880 IPR020040 Ribosomal protein L6, alpha-beta domain Clocl_3880 IPR000702 Ribosomal protein L6 Clocl_3880 IPR002358 Ribosomal protein L6, conserved site Clocl_3880 IPR019906 Ribosomal protein L6, bacterial-type Clocl_3880 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily Clocl_3881 IPR000630 Ribosomal protein S8 Clocl_3881 IPR035987 Ribosomal protein S8 superfamily Clocl_3882 IPR023053 Ribosomal protein S14, type Z Clocl_3882 IPR018271 Ribosomal protein S14, conserved site Clocl_3882 IPR001209 Ribosomal protein S14 Clocl_3883 IPR020929 Ribosomal protein L5, conserved site Clocl_3883 IPR022803 Ribosomal protein L5 domain superfamily Clocl_3883 IPR031310 Ribosomal protein L5, N-terminal Clocl_3883 IPR020930 Ribosomal protein L5, bacterial-type Clocl_3883 IPR002132 Ribosomal protein L5 Clocl_3883 IPR031309 Ribosomal protein L5, C-terminal Clocl_3884 IPR003256 Ribosomal protein L24 Clocl_3884 IPR008991 Translation protein SH3-like domain superfamily Clocl_3884 IPR041988 Ribosomal Protein L26/L24, KOW domain Clocl_3884 IPR014722 Ribosomal protein L2, domain 2 Clocl_3885 IPR000218 Ribosomal protein L14P Clocl_3885 IPR005745 Ribosomal protein L14P, bacterial-type Clocl_3885 IPR036853 Ribosomal protein L14 superfamily Clocl_3886 IPR012340 Nucleic acid-binding, OB-fold Clocl_3886 IPR019984 30S ribosomal protein S17 Clocl_3886 IPR000266 Ribosomal protein S17/S11 Clocl_3886 IPR019979 Ribosomal protein S17, conserved site Clocl_3887 IPR001854 Ribosomal protein L29/L35 Clocl_3887 IPR036049 Ribosomal protein L29/L35 superfamily Clocl_3887 IPR018254 Ribosomal protein L29, conserved site Clocl_3888 IPR020798 Ribosomal protein L16, conserved site Clocl_3888 IPR036920 Ribosomal protein L10e/L16 superfamily Clocl_3888 IPR016180 Ribosomal protein L10e/L16 Clocl_3888 IPR000114 Ribosomal protein L16 Clocl_3889 IPR004087 K Homology domain Clocl_3889 IPR015946 K homology domain-like, alpha/beta Clocl_3889 IPR004044 K Homology domain, type 2 Clocl_3889 IPR009019 K homology domain superfamily, prokaryotic type Clocl_3889 IPR005704 Ribosomal protein S3, bacterial-type Clocl_3889 IPR001351 Ribosomal protein S3, C-terminal Clocl_3889 IPR036419 Ribosomal protein S3, C-terminal domain superfamily Clocl_3889 IPR018280 Ribosomal protein S3, conserved site Clocl_3890 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type Clocl_3890 IPR001063 Ribosomal protein L22/L17 Clocl_3890 IPR018260 Ribosomal protein L22/L17, conserved site Clocl_3890 IPR036394 Ribosomal protein L22/L17 superfamily Clocl_3891 IPR002222 Ribosomal protein S19/S15 Clocl_3891 IPR005732 Ribosomal protein S19, bacterial-type Clocl_3891 IPR020934 Ribosomal protein S19 conserved site Clocl_3891 IPR023575 Ribosomal protein S19, superfamily Clocl_3892 IPR008991 Translation protein SH3-like domain superfamily Clocl_3892 IPR014726 Ribosomal protein L2, domain 3 Clocl_3892 IPR022669 Ribosomal protein L2, C-terminal Clocl_3892 IPR022671 Ribosomal protein L2, conserved site Clocl_3892 IPR002171 Ribosomal protein L2 Clocl_3892 IPR014722 Ribosomal protein L2, domain 2 Clocl_3892 IPR022666 Ribosomal Proteins L2, RNA binding domain Clocl_3892 IPR012340 Nucleic acid-binding, OB-fold Clocl_3892 IPR005880 Ribosomal protein L2, bacterial/organellar-type Clocl_3893 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily Clocl_3893 IPR012678 Ribosomal protein L23/L15e core domain superfamily Clocl_3893 IPR013025 Ribosomal protein L25/L23 Clocl_3894 IPR002136 Ribosomal protein L4/L1e Clocl_3894 IPR023574 Ribosomal protein L4 domain superfamily Clocl_3894 IPR013005 50S ribosomal protein uL4 Clocl_3895 IPR019927 Ribosomal protein L3, bacterial/organelle-type Clocl_3895 IPR000597 Ribosomal protein L3 Clocl_3895 IPR009000 Translation protein, beta-barrel domain superfamily Clocl_3895 IPR019926 Ribosomal protein L3, conserved site Clocl_3896 IPR001848 Ribosomal protein S10 Clocl_3896 IPR018268 Ribosomal protein S10, conserved site Clocl_3896 IPR036838 Ribosomal protein S10 domain superfamily Clocl_3896 IPR027486 Ribosomal protein S10 domain Clocl_3897 IPR007829 TM2 domain Clocl_3902 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type Clocl_3902 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain Clocl_3902 IPR002797 Polysaccharide biosynthesis protein Clocl_3908 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_3908 IPR013324 RNA polymerase sigma factor, region 3/4-like Clocl_3908 IPR013325 RNA polymerase sigma factor, region 2 Clocl_3908 IPR007624 RNA polymerase sigma-70 region 3 Clocl_3908 IPR007630 RNA polymerase sigma-70 region 4 Clocl_3908 IPR014322 RNA polymerase sigma-B/F/G type Clocl_3908 IPR014288 RNA polymerase sigma-B factor Clocl_3908 IPR014284 RNA polymerase sigma-70 like domain Clocl_3908 IPR000943 RNA polymerase sigma-70 Clocl_3908 IPR007627 RNA polymerase sigma-70 region 2 Clocl_3910 IPR003658 Anti-sigma factor antagonist Clocl_3910 IPR002645 STAS domain Clocl_3910 IPR036513 STAS domain superfamily Clocl_3911 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type Clocl_3911 IPR012340 Nucleic acid-binding, OB-fold Clocl_3911 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal Clocl_3911 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II Clocl_3911 IPR002313 Lysine-tRNA ligase, class II Clocl_3911 IPR006195 Aminoacyl-tRNA synthetase, class II Clocl_3911 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) Clocl_3912 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal Clocl_3912 IPR023459 Transcription elongation factor GreA/GreB family Clocl_3912 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal Clocl_3912 IPR028624 Transcription elongation factor GreA/GreB Clocl_3912 IPR006359 Transcription elongation factor GreA Clocl_3912 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily Clocl_3912 IPR018151 Transcription elongation factor, GreA/GreB, conserved site Clocl_3912 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily Clocl_3914 IPR011583 Chitinase II Clocl_3914 IPR017853 Glycoside hydrolase superfamily Clocl_3914 IPR001223 Glycoside hydrolase family 18, catalytic domain Clocl_3917 IPR003305 Carbohydrate-binding, CenC-like Clocl_3917 IPR008979 Galactose-binding-like domain superfamily Clocl_3917 IPR008928 Six-hairpin glycosidase superfamily Clocl_3917 IPR016134 Dockerin domain Clocl_3917 IPR014756 Immunoglobulin E-set Clocl_3917 IPR013783 Immunoglobulin-like fold Clocl_3917 IPR018221 Glycoside hydrolase family 9, His active site Clocl_3917 IPR033126 Glycosyl hydrolases family 9, Asp/Glu active sites Clocl_3917 IPR001701 Glycoside hydrolase family 9 Clocl_3917 IPR036439 Dockerin domain superfamily Clocl_3917 IPR002105 Dockerin type I repeat Clocl_3917 IPR004197 Cellulase, Ig-like domain Clocl_3917 IPR012341 Six-hairpin glycosidase-like superfamily Clocl_3918 IPR018370 Chaperonin Cpn60, conserved site Clocl_3918 IPR001844 Chaperonin Cpn60 Clocl_3918 IPR002423 Chaperonin Cpn60/TCP-1 family Clocl_3918 IPR027409 GroEL-like apical domain superfamily Clocl_3918 IPR027413 GroEL-like equatorial domain superfamily Clocl_3918 IPR027410 TCP-1-like chaperonin intermediate domain superfamily Clocl_3919 IPR020818 GroES chaperonin family Clocl_3919 IPR037124 GroES chaperonin superfamily Clocl_3919 IPR011032 GroES-like superfamily Clocl_3919 IPR018369 Chaperonin GroES, conserved site Clocl_3920 IPR036514 SGNH hydrolase superfamily Clocl_3920 IPR017853 Glycoside hydrolase superfamily Clocl_3920 IPR018087 Glycoside hydrolase, family 5, conserved site Clocl_3920 IPR001547 Glycoside hydrolase, family 5 Clocl_3920 IPR001087 GDSL lipase/esterase Clocl_3920 IPR036439 Dockerin domain superfamily Clocl_3920 IPR016134 Dockerin domain Clocl_3920 IPR002105 Dockerin type I repeat Clocl_3920 IPR037461 CtCE2-like domain Clocl_3920 IPR040794 Carbohydrate esterase 2, N-terminal Clocl_3920 IPR008979 Galactose-binding-like domain superfamily Clocl_3922 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily Clocl_3922 IPR023019 Histidine biosynthesis bifunctional protein HisIE Clocl_3922 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase Clocl_3922 IPR026660 Phosphoribosyl-AMP cyclohydrolase Clocl_3922 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like Clocl_3922 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain Clocl_3923 IPR011060 Ribulose-phosphate binding barrel Clocl_3923 IPR006062 Histidine biosynthesis Clocl_3923 IPR004651 Histidine biosynthesis, HisF Clocl_3923 IPR013785 Aldolase-type TIM barrel Clocl_3924 IPR006062 Histidine biosynthesis Clocl_3924 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA Clocl_3924 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase Clocl_3924 IPR011060 Ribulose-phosphate binding barrel Clocl_3924 IPR013785 Aldolase-type TIM barrel Clocl_3925 IPR029062 Class I glutamine amidotransferase-like Clocl_3925 IPR017926 Glutamine amidotransferase Clocl_3925 IPR010139 Imidazole glycerol phosphate synthase, subunit H Clocl_3926 IPR028923 SAICAR synthetase/ADE2, N-terminal Clocl_3926 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase Clocl_3927 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily Clocl_3927 IPR020568 Ribosomal protein S5 domain 2-type fold Clocl_3927 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site Clocl_3927 IPR000807 Imidazoleglycerol-phosphate dehydratase Clocl_3928 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Clocl_3928 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Clocl_3928 IPR015424 Pyridoxal phosphate-dependent transferase Clocl_3928 IPR005861 Histidinol-phosphate aminotransferase family Clocl_3928 IPR004839 Aminotransferase, class I/classII Clocl_3928 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site Clocl_3929 IPR012131 Histidinol dehydrogenase Clocl_3929 IPR001692 Histidinol dehydrogenase, conserved site Clocl_3929 IPR016161 Aldehyde/histidinol dehydrogenase Clocl_3929 IPR022695 Histidinol dehydrogenase, monofunctional Clocl_3930 IPR013820 ATP phosphoribosyltransferase, catalytic domain Clocl_3930 IPR018198 ATP phosphoribosyltransferase, conserved site Clocl_3930 IPR001348 ATP phosphoribosyltransferase HisG Clocl_3930 IPR024893 ATP phosphoribosyltransferase HisG, short form Clocl_3931 IPR006195 Aminoacyl-tRNA synthetase, class II Clocl_3931 IPR036621 Anticodon-binding domain superfamily Clocl_3931 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain Clocl_3931 IPR004517 ATP phosphoribosyltransferase regulatory subunit Clocl_3931 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit Clocl_3932 IPR036439 Dockerin domain superfamily Clocl_3932 IPR002105 Dockerin type I repeat Clocl_3932 IPR016134 Dockerin domain Clocl_3932 IPR018247 EF-Hand 1, calcium-binding site Clocl_3932 IPR001547 Glycoside hydrolase, family 5 Clocl_3932 IPR018087 Glycoside hydrolase, family 5, conserved site Clocl_3932 IPR017853 Glycoside hydrolase superfamily Clocl_3937 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Clocl_3937 IPR001647 DNA-binding HTH domain, TetR-type Clocl_3937 IPR009057 Homeobox-like domain superfamily Clocl_3940 IPR014017 UvrD-like DNA helicase, C-terminal Clocl_3940 IPR000212 DNA helicase, UvrD/REP type Clocl_3940 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_3940 IPR013986 DExx box DNA helicase domain superfamily Clocl_3940 IPR034739 UvrD/AddA helicase, N-terminal Clocl_3940 IPR005751 ATP-dependent DNA helicase PcrA Clocl_3940 IPR014016 UvrD-like helicase, ATP-binding domain Clocl_3941 IPR034694 Ribosome hibernation promoting factor, long/plastid Clocl_3941 IPR036567 Ribosome hibernation promotion factor-like Clocl_3941 IPR003489 Ribosome hibernation promoting factor/RaiA Clocl_3941 IPR038416 Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily Clocl_3941 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal Clocl_3942 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Clocl_3942 IPR017918 Nitrogen regulatory protein PII, conserved site Clocl_3942 IPR002187 Nitrogen regulatory protein PII Clocl_3942 IPR011322 Nitrogen regulatory PII-like, alpha/beta Clocl_3943 IPR029020 Ammonium/urea transporter Clocl_3943 IPR001905 Ammonium transporter Clocl_3943 IPR018047 Ammonium transporter, conserved site Clocl_3943 IPR024041 Ammonium transporter AmtB-like domain Clocl_3945 IPR008146 Glutamine synthetase, catalytic domain Clocl_3945 IPR027302 Glutamine synthetase, N-terminal conserved site Clocl_3945 IPR004809 Glutamine synthetase type I Clocl_3945 IPR027303 Glutamine synthetase, glycine-rich site Clocl_3945 IPR036651 Glutamine synthetase, N-terminal domain superfamily Clocl_3945 IPR008147 Glutamine synthetase, beta-Grasp domain Clocl_3945 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain Clocl_3946 IPR029044 Nucleotide-diphospho-sugar transferases Clocl_3947 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class Clocl_3947 IPR002941 DNA methylase N-4/N-6 Clocl_3947 IPR002052 DNA methylase, N-6 adenine-specific, conserved site Clocl_3947 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clocl_3947 IPR041405 Type III R-M EcoP15I, C-terminal Clocl_3949 IPR003675 CAAX prenyl protease 2 Clocl_3951 IPR037522 HD-GYP domain Clocl_3951 IPR001789 Signal transduction response regulator, receiver domain Clocl_3951 IPR003607 HD/PDEase domain Clocl_3951 IPR011006 CheY-like superfamily Clocl_3953 IPR018247 EF-Hand 1, calcium-binding site Clocl_3953 IPR008969 Carboxypeptidase-like, regulatory domain superfamily Clocl_3953 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clocl_3953 IPR036439 Dockerin domain superfamily Clocl_3953 IPR036966 Carbohydrate-binding module 3 superfamily Clocl_3953 IPR002102 Cellulosome anchoring protein, cohesin domain Clocl_3953 IPR002105 Dockerin type I repeat Clocl_3953 IPR016134 Dockerin domain Clocl_3953 IPR001956 Carbohydrate-binding module 3 Clocl_3954 IPR018247 EF-Hand 1, calcium-binding site Clocl_3954 IPR016134 Dockerin domain Clocl_3954 IPR002105 Dockerin type I repeat Clocl_3954 IPR002102 Cellulosome anchoring protein, cohesin domain Clocl_3954 IPR036966 Carbohydrate-binding module 3 superfamily Clocl_3954 IPR001956 Carbohydrate-binding module 3 Clocl_3954 IPR008969 Carboxypeptidase-like, regulatory domain superfamily Clocl_3954 IPR036439 Dockerin domain superfamily Clocl_3954 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clocl_3955 IPR036291 NAD(P)-binding domain superfamily Clocl_3955 IPR016040 NAD(P)-binding domain Clocl_3956 IPR037538 UTP--glucose-1-phosphate uridylyltransferase, cyanobacteria Clocl_3956 IPR029044 Nucleotide-diphospho-sugar transferases Clocl_3956 IPR005835 Nucleotidyl transferase domain Clocl_3957 IPR036291 NAD(P)-binding domain superfamily Clocl_3957 IPR016040 NAD(P)-binding domain Clocl_3961 IPR036291 NAD(P)-binding domain superfamily Clocl_3961 IPR001509 NAD-dependent epimerase/dehydratase Clocl_3963 IPR006638 Elp3/MiaB/NifB Clocl_3963 IPR013483 Molybdenum cofactor biosynthesis protein A Clocl_3963 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site Clocl_3963 IPR010505 Molybdenum cofactor synthesis C-terminal Clocl_3963 IPR007197 Radical SAM Clocl_3963 IPR013785 Aldolase-type TIM barrel Clocl_3968 IPR036439 Dockerin domain superfamily Clocl_3968 IPR008928 Six-hairpin glycosidase superfamily Clocl_3968 IPR012341 Six-hairpin glycosidase-like superfamily Clocl_3968 IPR002105 Dockerin type I repeat Clocl_3968 IPR016134 Dockerin domain Clocl_3968 IPR023309 Endoglucanase F, domain 2 Clocl_3968 IPR027390 Endoglucanase F, domain 3 Clocl_3968 IPR000556 Glycoside hydrolase, 48F Clocl_3969 IPR042099 AMP-dependent synthetase-like superfamily Clocl_3969 IPR020845 AMP-binding, conserved site Clocl_3969 IPR000873 AMP-dependent synthetase/ligase Clocl_3969 IPR025110 AMP-binding enzyme, C-terminal domain Clocl_3970 IPR005517 Translation elongation factor EFG/EF2, domain IV Clocl_3970 IPR009000 Translation protein, beta-barrel domain superfamily Clocl_3970 IPR000795 Transcription factor, GTP-binding domain Clocl_3970 IPR035650 Tetracycline resistance protein, C-terminal Clocl_3970 IPR005225 Small GTP-binding protein domain Clocl_3970 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Clocl_3970 IPR035647 EF-G domain III/V-like Clocl_3970 IPR041095 Elongation Factor G, domain II Clocl_3970 IPR000640 Elongation factor EFG, domain V-like Clocl_3970 IPR020568 Ribosomal protein S5 domain 2-type fold Clocl_3970 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_3970 IPR031157 Tr-type G domain, conserved site Clocl_3971 IPR002589 Macro domain Clocl_3973 IPR036597 Fido-like domain superfamily Clocl_3973 IPR003812 Fido domain Clocl_3973 IPR041533 Bartonella effector protein, BID domain Clocl_3977 IPR014284 RNA polymerase sigma-70 like domain Clocl_3977 IPR000792 Transcription regulator LuxR, C-terminal Clocl_3977 IPR013324 RNA polymerase sigma factor, region 3/4-like Clocl_3977 IPR014218 RNA polymerase sigma-H type Clocl_3977 IPR016371 RNA polymerase sigma-H factor Clocl_3977 IPR000943 RNA polymerase sigma-70 Clocl_3977 IPR007627 RNA polymerase sigma-70 region 2 Clocl_3977 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 Clocl_3977 IPR013325 RNA polymerase sigma factor, region 2 Clocl_3978 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Clocl_3978 IPR029028 Alpha/beta knot methyltransferases Clocl_3978 IPR001537 tRNA/rRNA methyltransferase, SpoU type Clocl_3978 IPR004441 RNA methyltransferase TrmH family Clocl_3978 IPR029064 50S ribosomal protein L30e-like Clocl_3978 IPR013123 RNA 2-O ribose methyltransferase, substrate binding Clocl_3979 IPR036389 Ribonuclease III, endonuclease domain superfamily Clocl_3979 IPR000999 Ribonuclease III domain Clocl_3979 IPR008226 Mini-ribonuclease 3 family Clocl_3980 IPR015803 Cysteine-tRNA ligase Clocl_3980 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR Clocl_3980 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase Clocl_3980 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clocl_3980 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding Clocl_3980 IPR032678 tRNA synthetases class I, catalytic domain Clocl_3981 IPR001451 Hexapeptide repeat Clocl_3981 IPR018357 Hexapeptide transferase, conserved site Clocl_3981 IPR042122 Serine acetyltransferase, N-terminal domain superfamily Clocl_3981 IPR005881 Serine O-acetyltransferase Clocl_3981 IPR011004 Trimeric LpxA-like superfamily Clocl_3989 IPR017439 Amidohydrolase Clocl_3989 IPR036264 Bacterial exopeptidase dimerisation domain Clocl_3989 IPR002933 Peptidase M20 Clocl_3989 IPR011650 Peptidase M20, dimerisation domain Clocl_3990 IPR007211 Protein of unknown function DUF378 Clocl_3992 IPR038300 SASP, alpha/beta-type superfamily Clocl_3992 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site Clocl_3992 IPR001448 Small acid-soluble spore protein, alpha/beta-type Clocl_3994 IPR002876 Transcriptional regulator TACO1-like Clocl_3994 IPR017856 Integrase-like, N-terminal Clocl_3994 IPR029072 YebC-like Clocl_3994 IPR026564 Transcriptional regulator TACO1-like, domain 3 Clocl_3995 IPR013656 PAS fold-4 Clocl_3995 IPR035965 PAS domain superfamily Clocl_3995 IPR000700 PAS-associated, C-terminal Clocl_3995 IPR000014 PAS domain Clocl_3995 IPR001610 PAC motif Clocl_3995 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Clocl_3995 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Clocl_3995 IPR005467 Histidine kinase domain Clocl_3995 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clocl_3995 IPR003594 Histidine kinase/HSP90-like ATPase Clocl_3995 IPR011006 CheY-like superfamily Clocl_3995 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Clocl_3995 IPR001789 Signal transduction response regulator, receiver domain Clocl_3997 IPR036956 Impact, N-terminal domain superfamily Clocl_3997 IPR020568 Ribosomal protein S5 domain 2-type fold Clocl_3997 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal Clocl_3997 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site Clocl_3997 IPR035647 EF-G domain III/V-like Clocl_3997 IPR023582 Impact family Clocl_3997 IPR001498 Impact, N-terminal Clocl_3997 IPR015796 Impact family, bacterial/archaeal Clocl_3998 IPR036286 LexA/Signal peptidase-like superfamily Clocl_3998 IPR000223 Peptidase S26A, signal peptidase I Clocl_3998 IPR019758 Peptidase S26A, signal peptidase I, conserved site Clocl_3998 IPR019757 Peptidase S26A, signal peptidase I, lysine active site Clocl_3998 IPR019756 Peptidase S26A, signal peptidase I, serine active site Clocl_3998 IPR019533 Peptidase S26 Clocl_4000 IPR016496 GTPase HflX Clocl_4000 IPR025121 GTPase HflX, N-terminal Clocl_4000 IPR042108 GTPase HflX, N-terminal domain superfamily Clocl_4000 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_4000 IPR032305 GTP-binding protein, middle domain Clocl_4000 IPR006073 GTP binding domain Clocl_4000 IPR030394 HflX-type guanine nucleotide-binding (G) domain Clocl_4002 IPR033704 dUTPase, trimeric Clocl_4002 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase Clocl_4002 IPR036157 dUTPase-like superfamily Clocl_4002 IPR029054 dUTPase-like Clocl_4003 IPR001539 Peptidase U32 Clocl_4003 IPR020988 Peptidase U32, collagenase Clocl_4004 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily Clocl_4004 IPR006124 Metalloenzyme Clocl_4004 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent Clocl_4004 IPR017850 Alkaline-phosphatase-like, core domain superfamily Clocl_4004 IPR011258 BPG-independent PGAM, N-terminal Clocl_4007 IPR008928 Six-hairpin glycosidase superfamily Clocl_4007 IPR012341 Six-hairpin glycosidase-like superfamily Clocl_4007 IPR002105 Dockerin type I repeat Clocl_4007 IPR036439 Dockerin domain superfamily Clocl_4007 IPR023309 Endoglucanase F, domain 2 Clocl_4007 IPR027390 Endoglucanase F, domain 3 Clocl_4007 IPR000556 Glycoside hydrolase, 48F Clocl_4007 IPR016134 Dockerin domain Clocl_4008 IPR001956 Carbohydrate-binding module 3 Clocl_4008 IPR036966 Carbohydrate-binding module 3 superfamily Clocl_4008 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clocl_4008 IPR024449 Anti-sigma factor RsgI, N-terminal Clocl_4009 IPR013325 RNA polymerase sigma factor, region 2 Clocl_4009 IPR014244 RNA polymerase sigma-I type Clocl_4010 IPR007168 Phage shock protein, PspC, N-terminal Clocl_4012 IPR011683 Glycosyl hydrolase family 53 Clocl_4012 IPR017853 Glycoside hydrolase superfamily Clocl_4013 IPR006214 Bax inhibitor 1-related Clocl_4014 IPR035938 Hemerythrin-like superfamily Clocl_4014 IPR016131 Haemerythrin, iron-binding site Clocl_4014 IPR012312 Haemerythrin-like Clocl_4014 IPR023504 Bacteriohemerythrin-like protein Clocl_4014 IPR012827 Haemerythrin, metal-binding domain Clocl_4016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site Clocl_4016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal Clocl_4016 IPR023165 rRNA adenine dimethylase-like Clocl_4016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm Clocl_4016 IPR011530 Ribosomal RNA adenine dimethylase Clocl_4016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clocl_4017 IPR011098 G5 domain Clocl_4017 IPR036908 RlpA-like domain superfamily Clocl_4017 IPR010611 3D domain Clocl_4017 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 Clocl_4019 IPR015991 Uncharacterised hydrolase TatD-type Clocl_4019 IPR032466 Metal-dependent hydrolase Clocl_4019 IPR001130 TatD family Clocl_4019 IPR018228 Deoxyribonuclease, TatD-related, conserved site Clocl_4020 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal Clocl_4020 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain Clocl_4020 IPR012340 Nucleic acid-binding, OB-fold Clocl_4020 IPR015413 Methionyl/Leucyl tRNA synthetase Clocl_4020 IPR023457 Methionine-tRNA synthetase, type 2 Clocl_4020 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding Clocl_4020 IPR002547 tRNA-binding domain Clocl_4020 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding Clocl_4020 IPR014758 Methionyl-tRNA synthetase Clocl_4020 IPR033911 Methioninyl-tRNA synthetase core domain Clocl_4020 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clocl_4020 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site Clocl_4021 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Clocl_4022 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Clocl_4023 IPR040678 AbrB, C-terminal Clocl_4023 IPR007159 SpoVT-AbrB domain Clocl_4023 IPR037914 SpoVT-AbrB domain superfamily Clocl_4024 IPR035996 Tetrapyrrole methylase superfamily Clocl_4024 IPR014777 Tetrapyrrole methylase, subdomain 1 Clocl_4024 IPR014776 Tetrapyrrole methylase, subdomain 2 Clocl_4024 IPR008189 rRNA small subunit methyltransferase I Clocl_4024 IPR018063 SAM-dependent methyltransferase RsmI, conserved site Clocl_4024 IPR000878 Tetrapyrrole methylase Clocl_4025 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clocl_4025 IPR007848 Methyltransferase small domain Clocl_4026 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clocl_4026 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clocl_4027 IPR007557 PSP1, C-terminal Clocl_4029 IPR024042 TM1646-like domain superfamily Clocl_4029 IPR005585 Protein of unknown function DUF327 Clocl_4030 IPR018095 Thymidylate kinase, conserved site Clocl_4030 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_4030 IPR039430 Thymidylate kinase-like domain Clocl_4030 IPR018094 Thymidylate kinase Clocl_4031 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Clocl_4031 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Clocl_4031 IPR015424 Pyridoxal phosphate-dependent transferase Clocl_4031 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily Clocl_4031 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal Clocl_4031 IPR000310 Orn/Lys/Arg decarboxylase, major domain Clocl_4033 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clocl_4033 IPR013542 Domain of unknown function DUF1730 Clocl_4033 IPR016024 Armadillo-type fold Clocl_4033 IPR004453 Epoxyqueuosine reductase QueG Clocl_4033 IPR004155 PBS lyase HEAT-like repeat Clocl_4033 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clocl_4034 IPR029058 Alpha/Beta hydrolase fold Clocl_4034 IPR031158 Glycosyl hydrolases family 10, active site Clocl_4034 IPR001000 Glycoside hydrolase family 10 domain Clocl_4034 IPR008979 Galactose-binding-like domain superfamily Clocl_4034 IPR000801 Putative esterase Clocl_4034 IPR018247 EF-Hand 1, calcium-binding site Clocl_4034 IPR036439 Dockerin domain superfamily Clocl_4034 IPR016134 Dockerin domain Clocl_4034 IPR002105 Dockerin type I repeat Clocl_4034 IPR003305 Carbohydrate-binding, CenC-like Clocl_4034 IPR017853 Glycoside hydrolase superfamily Clocl_4036 IPR004619 Type III pantothenate kinase Clocl_4039 IPR036390 Winged helix DNA-binding domain superfamily Clocl_4039 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_4039 IPR008988 Transcriptional repressor, C-terminal Clocl_4039 IPR013196 Helix-turn-helix, type 11 Clocl_4039 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain Clocl_4039 IPR003142 Biotin protein ligase, C-terminal Clocl_4039 IPR004409 Biotin operon repressor, helix-turn-helix domain Clocl_4039 IPR004408 Biotin--acetyl-CoA-carboxylase ligase Clocl_4039 IPR030855 Bifunctional ligase/repressor BirA Clocl_4041 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK Clocl_4041 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily Clocl_4042 IPR006156 Dihydroneopterin aldolase Clocl_4042 IPR006157 Dihydroneopterin aldolase/epimerase domain Clocl_4043 IPR000489 Pterin-binding domain Clocl_4043 IPR011005 Dihydropteroate synthase-like Clocl_4043 IPR006390 Dihydropteroate synthase Clocl_4047 IPR039697 Iron-type alcohol dehydrogenase-like Clocl_4047 IPR018211 Alcohol dehydrogenase, iron-type, conserved site Clocl_4047 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA Clocl_4048 IPR011991 ArsR-like helix-turn-helix domain Clocl_4048 IPR005149 Transcription regulator PadR, N-terminal Clocl_4048 IPR036390 Winged helix DNA-binding domain superfamily Clocl_4048 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_4050 IPR003660 HAMP domain Clocl_4050 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Clocl_4050 IPR029151 Periplasmic sensor-like domain superfamily Clocl_4050 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding Clocl_4050 IPR033479 Double Cache domain 1 Clocl_4051 IPR001667 DDH domain Clocl_4051 IPR038763 DHH phosphoesterase superfamily Clocl_4051 IPR004097 DHHA2 domain Clocl_4051 IPR038222 DHHA2 domain superfamily Clocl_4051 IPR010766 DRTGG Clocl_4051 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily Clocl_4051 IPR000644 CBS domain Clocl_4052 IPR018234 GTP cyclohydrolase I, conserved site Clocl_4052 IPR001474 GTP cyclohydrolase I Clocl_4052 IPR020602 GTP cyclohydrolase I domain Clocl_4053 IPR001851 ABC transporter, permease Clocl_4054 IPR003593 AAA+ ATPase domain Clocl_4054 IPR003439 ABC transporter-like Clocl_4054 IPR017871 ABC transporter, conserved site Clocl_4054 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_4055 IPR028082 Periplasmic binding protein-like I Clocl_4055 IPR025997 Periplasmic binding protein Clocl_4056 IPR011761 ATP-grasp fold Clocl_4056 IPR013651 ATP-grasp fold, RimK-type Clocl_4056 IPR011810 Cyanophycin synthetase Clocl_4056 IPR036565 Mur-like, catalytic domain superfamily Clocl_4056 IPR004101 Mur ligase, C-terminal Clocl_4056 IPR036615 Mur ligase, C-terminal domain superfamily Clocl_4056 IPR013221 Mur ligase, central Clocl_4057 IPR011811 Peptidase S51, cyanophycinase Clocl_4057 IPR029062 Class I glutamine amidotransferase-like Clocl_4057 IPR005320 Peptidase S51 Clocl_4059 IPR033826 Isoaspartyl-dipeptidase Clocl_4059 IPR011059 Metal-dependent hydrolase, composite domain superfamily Clocl_4059 IPR032466 Metal-dependent hydrolase Clocl_4059 IPR010229 Peptidase M38, beta-aspartyl dipeptidase Clocl_4059 IPR006680 Amidohydrolase-related Clocl_4060 IPR011991 ArsR-like helix-turn-helix domain Clocl_4060 IPR006200 Transcription regulator LexA Clocl_4060 IPR036286 LexA/Signal peptidase-like superfamily Clocl_4060 IPR006199 LexA repressor, DNA-binding domain Clocl_4060 IPR006197 Peptidase S24, LexA-like Clocl_4060 IPR015927 Peptidase S24/S26A/S26B/S26C Clocl_4060 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_4060 IPR036390 Winged helix DNA-binding domain superfamily Clocl_4060 IPR039418 LexA-like Clocl_4061 IPR024084 Isopropylmalate dehydrogenase-like domain Clocl_4061 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site Clocl_4061 IPR004429 Isopropylmalate dehydrogenase Clocl_4062 IPR018060 DNA binding HTH domain, AraC-type Clocl_4062 IPR020449 Transcription regulator HTH, AraC- type Clocl_4062 IPR011051 RmlC-like cupin domain superfamily Clocl_4062 IPR009057 Homeobox-like domain superfamily Clocl_4062 IPR018062 HTH domain AraC-type, conserved site Clocl_4062 IPR014710 RmlC-like jelly roll fold Clocl_4066 IPR029035 DHS-like NAD/FAD-binding domain superfamily Clocl_4066 IPR014092 Pyruvate oxidase Clocl_4066 IPR029061 Thiamin diphosphate-binding fold Clocl_4066 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain Clocl_4066 IPR000399 TPP-binding enzyme, conserved site Clocl_4066 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding Clocl_4066 IPR012000 Thiamine pyrophosphate enzyme, central domain Clocl_4068 IPR019264 Domain of unknown function DUF2179 Clocl_4068 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Clocl_4068 IPR022930 Protein of unknown function UPF0316 Clocl_4069 IPR022742 Serine aminopeptidase, S33 Clocl_4069 IPR029058 Alpha/Beta hydrolase fold Clocl_4074 IPR036584 Flagellar protein FliS superfamily Clocl_4074 IPR003713 Flagellar protein FliS Clocl_4075 IPR010810 Flagellin hook, IN motif Clocl_4075 IPR040026 Flagellar hook-associated protein 2 Clocl_4075 IPR010809 Flagellar hook-associated protein 2, C-terminal Clocl_4075 IPR003481 Flagellar hook-associated protein 2, N-terminal Clocl_4077 IPR005888 dTDP-glucose 4,6-dehydratase Clocl_4077 IPR016040 NAD(P)-binding domain Clocl_4077 IPR036291 NAD(P)-binding domain superfamily Clocl_4078 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Clocl_4078 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase Clocl_4078 IPR015424 Pyridoxal phosphate-dependent transferase Clocl_4078 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Clocl_4081 IPR036477 Formyl transferase, N-terminal domain superfamily Clocl_4081 IPR011034 Formyl transferase-like, C-terminal domain superfamily Clocl_4081 IPR037022 Formyl transferase, C-terminal domain superfamily Clocl_4081 IPR005793 Formyl transferase, C-terminal Clocl_4081 IPR005794 Methionyl-tRNA formyltransferase Clocl_4081 IPR002376 Formyl transferase, N-terminal Clocl_4081 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain Clocl_4082 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily Clocl_4082 IPR013785 Aldolase-type TIM barrel Clocl_4082 IPR013132 N-acetylneuraminic acid synthase, N-terminal Clocl_4082 IPR020030 Pseudaminic acid biosynthesis, PseI Clocl_4082 IPR013974 SAF domain Clocl_4082 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal Clocl_4084 IPR036736 ACP-like superfamily Clocl_4084 IPR003231 Acyl carrier protein (ACP) Clocl_4084 IPR009081 Phosphopantetheine binding ACP domain Clocl_4086 IPR003329 Acylneuraminate cytidylyltransferase Clocl_4086 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase Clocl_4086 IPR029044 Nucleotide-diphospho-sugar transferases Clocl_4087 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clocl_4087 IPR041698 Methyltransferase domain 25 Clocl_4088 IPR013692 UDP-glucose 4-epimerase CapD, C-terminal domain Clocl_4088 IPR036291 NAD(P)-binding domain superfamily Clocl_4088 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain Clocl_4092 IPR042187 Flagellin, C-terminal domain, subdomain 2 Clocl_4092 IPR001029 Flagellin, D0/D1 domain Clocl_4092 IPR001492 Flagellin Clocl_4093 IPR001492 Flagellin Clocl_4093 IPR042187 Flagellin, C-terminal domain, subdomain 2 Clocl_4093 IPR001029 Flagellin, D0/D1 domain Clocl_4094 IPR042187 Flagellin, C-terminal domain, subdomain 2 Clocl_4094 IPR001492 Flagellin Clocl_4094 IPR001029 Flagellin, D0/D1 domain Clocl_4095 IPR036107 Carbon storage regulator superfamily Clocl_4095 IPR003751 Translational regulator CsrA Clocl_4096 IPR003775 Flagellar assembly factor FliW Clocl_4096 IPR024046 Flagellar assembly factor FliW domain superfamily Clocl_4098 IPR001029 Flagellin, D0/D1 domain Clocl_4098 IPR013384 Flagellar hook-associated protein 3 Clocl_4099 IPR002371 Flagellar hook-associated protein 1 Clocl_4099 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Clocl_4099 IPR001444 Flagellar basal body rod protein, N-terminal Clocl_4099 IPR019776 Flagellar basal body rod protein, conserved site Clocl_4100 IPR001444 Flagellar basal body rod protein, N-terminal Clocl_4100 IPR019776 Flagellar basal body rod protein, conserved site Clocl_4100 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Clocl_4100 IPR002371 Flagellar hook-associated protein 1 Clocl_4104 IPR029057 Phosphoribosyltransferase-like Clocl_4104 IPR005222 Competence protein ComF Clocl_4104 IPR000836 Phosphoribosyltransferase domain Clocl_4105 IPR010920 LSM domain superfamily Clocl_4105 IPR006685 Mechanosensitive ion channel MscS Clocl_4105 IPR011066 Mechanosensitive ion channel MscS, C-terminal Clocl_4105 IPR006686 Mechanosensitive ion channel MscS, conserved site Clocl_4105 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 Clocl_4105 IPR023408 Mechanosensitive ion channel MscS domain superfamily Clocl_4105 IPR008910 Conserved TM helix Clocl_4108 IPR017926 Glutamine amidotransferase Clocl_4108 IPR029062 Class I glutamine amidotransferase-like Clocl_4108 IPR011697 Peptidase C26 Clocl_4109 IPR036513 STAS domain superfamily Clocl_4109 IPR002645 STAS domain Clocl_4109 IPR003658 Anti-sigma factor antagonist Clocl_4109 IPR014237 Anti-sigma F factor antagonist Clocl_4111 IPR024922 Rubredoxin Clocl_4111 IPR024934 Rubredoxin-like domain Clocl_4111 IPR024935 Rubredoxin domain Clocl_4111 IPR018527 Rubredoxin, iron-binding site Clocl_4112 IPR036515 Transposase IS200-like superfamily Clocl_4112 IPR002686 Transposase IS200-like Clocl_4113 IPR009665 Protein of unknown function DUF1256 Clocl_4113 IPR023430 Peptidase HybD-like domain superfamily Clocl_4115 IPR024301 Putative amidase domain Clocl_4116 IPR002150 Ribosomal protein L31 Clocl_4116 IPR027491 Ribosomal protein L31 type A Clocl_4116 IPR042105 Ribosomal protein L31 superfamily Clocl_4116 IPR034704 L28p-like Clocl_4117 IPR003593 AAA+ ATPase domain Clocl_4117 IPR012340 Nucleic acid-binding, OB-fold Clocl_4117 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_4117 IPR041703 Transcription termination factor Rho, ATP binding domain Clocl_4117 IPR011112 Rho termination factor, N-terminal Clocl_4117 IPR036269 Rho termination factor, N-terminal domain superfamily Clocl_4117 IPR011113 Rho termination factor, RNA-binding domain Clocl_4117 IPR004665 Transcription termination factor Rho Clocl_4117 IPR011129 Cold shock domain Clocl_4117 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain Clocl_4121 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_4121 IPR003593 AAA+ ATPase domain Clocl_4121 IPR017871 ABC transporter, conserved site Clocl_4121 IPR003439 ABC transporter-like Clocl_4122 IPR037294 ABC transporter, BtuC-like Clocl_4122 IPR000522 ABC transporter, permease protein, BtuC-like Clocl_4123 IPR002491 ABC transporter periplasmic binding domain Clocl_4123 IPR023544 ABC transporter, vitamin B12-binding protein Clocl_4126 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clocl_4126 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase Clocl_4126 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type Clocl_4126 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Clocl_4130 IPR005835 Nucleotidyl transferase domain Clocl_4130 IPR029044 Nucleotide-diphospho-sugar transferases Clocl_4130 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type Clocl_4131 IPR017039 Virulence factor BrkB Clocl_4132 IPR001648 Ribosomal protein S18 Clocl_4132 IPR036870 Ribosomal protein S18 superfamily Clocl_4132 IPR018275 Ribosomal protein S18, conserved site Clocl_4133 IPR012340 Nucleic acid-binding, OB-fold Clocl_4133 IPR000424 Primosome PriB/single-strand DNA-binding Clocl_4133 IPR011344 Single-stranded DNA-binding protein Clocl_4134 IPR000529 Ribosomal protein S6 Clocl_4134 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 Clocl_4134 IPR020814 Ribosomal protein S6, plastid/chloroplast Clocl_4134 IPR035980 Ribosomal protein S6 superfamily Clocl_4135 IPR000160 GGDEF domain Clocl_4135 IPR033424 Membrane-associated sensor domain Clocl_4135 IPR029787 Nucleotide cyclase Clocl_4136 IPR024449 Anti-sigma factor RsgI, N-terminal Clocl_4137 IPR013325 RNA polymerase sigma factor, region 2 Clocl_4137 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_4137 IPR007627 RNA polymerase sigma-70 region 2 Clocl_4137 IPR014284 RNA polymerase sigma-70 like domain Clocl_4137 IPR014244 RNA polymerase sigma-I type Clocl_4140 IPR000891 Pyruvate carboxyltransferase Clocl_4140 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain Clocl_4140 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site Clocl_4140 IPR013785 Aldolase-type TIM barrel Clocl_4140 IPR005675 Citramalate synthase Clocl_4140 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily Clocl_4141 IPR000891 Pyruvate carboxyltransferase Clocl_4141 IPR005671 2-isopropylmalate synthase, bacterial-type Clocl_4141 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily Clocl_4141 IPR013785 Aldolase-type TIM barrel Clocl_4141 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain Clocl_4141 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site Clocl_4142 IPR013116 Ketol-acid reductoisomerase, N-terminal Clocl_4142 IPR013023 Ketol-acid reductoisomerase Clocl_4142 IPR036291 NAD(P)-binding domain superfamily Clocl_4142 IPR014359 Ketol-acid reductoisomerase, prokaryotic Clocl_4142 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily Clocl_4142 IPR000506 Ketol-acid reductoisomerase, C-terminal Clocl_4143 IPR002912 ACT domain Clocl_4143 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal Clocl_4143 IPR019455 Acetolactate synthase, small subunit, C-terminal Clocl_4143 IPR004789 Acetolactate synthase, small subunit Clocl_4143 IPR039557 AHAS, ACT domain Clocl_4144 IPR012000 Thiamine pyrophosphate enzyme, central domain Clocl_4144 IPR012846 Acetolactate synthase, large subunit, biosynthetic Clocl_4144 IPR039368 Acetolactate synthase large subunit, TPP binding domain Clocl_4144 IPR029035 DHS-like NAD/FAD-binding domain superfamily Clocl_4144 IPR029061 Thiamin diphosphate-binding fold Clocl_4144 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain Clocl_4144 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding Clocl_4147 IPR002125 Cytidine and deoxycytidylate deaminase domain Clocl_4147 IPR016192 APOBEC/CMP deaminase, zinc-binding Clocl_4147 IPR016193 Cytidine deaminase-like Clocl_4148 IPR001478 PDZ domain Clocl_4148 IPR036034 PDZ superfamily Clocl_4148 IPR009003 Peptidase S1, PA clan Clocl_4148 IPR001940 Peptidase S1C Clocl_4150 IPR036779 LysM domain superfamily Clocl_4150 IPR034274 ENP1, carboxypeptidase domain Clocl_4150 IPR000834 Peptidase M14, carboxypeptidase A Clocl_4150 IPR018392 LysM domain Clocl_4153 IPR000380 DNA topoisomerase, type IA Clocl_4153 IPR034144 DNA topoisomerase 3-like, TOPRIM domain Clocl_4153 IPR006171 TOPRIM domain Clocl_4153 IPR005738 DNA topoisomerase III Clocl_4153 IPR003602 DNA topoisomerase, type IA, DNA-binding domain Clocl_4153 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 Clocl_4153 IPR023405 DNA topoisomerase, type IA, core domain Clocl_4153 IPR003601 DNA topoisomerase, type IA, domain 2 Clocl_4153 IPR023406 DNA topoisomerase, type IA, active site Clocl_4153 IPR013497 DNA topoisomerase, type IA, central Clocl_4153 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 Clocl_4153 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 Clocl_4154 IPR008764 Peptidase U57, YabG Clocl_4155 IPR025403 Domain of unknown function DUF4129 Clocl_4155 IPR021878 Protein-glutamine gamma-glutamyltransferase TgpA, N-terminal Clocl_4155 IPR038765 Papain-like cysteine peptidase superfamily Clocl_4155 IPR002931 Transglutaminase-like Clocl_4157 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_4157 IPR041628 ChlI/MoxR, AAA lid domain Clocl_4157 IPR011703 ATPase, AAA-3 Clocl_4158 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clocl_4158 IPR017853 Glycoside hydrolase superfamily Clocl_4158 IPR018087 Glycoside hydrolase, family 5, conserved site Clocl_4158 IPR001547 Glycoside hydrolase, family 5 Clocl_4158 IPR012291 CBM2, carbohydrate-binding domain superfamily Clocl_4158 IPR001919 Carbohydrate-binding type-2 domain Clocl_4159 IPR002509 NodB homology domain Clocl_4159 IPR005084 Carbohydrate binding module family 6 Clocl_4159 IPR013319 Glycoside hydrolase family 11/12 Clocl_4159 IPR018208 Glycoside hydrolase family 11, active site 1 Clocl_4159 IPR033119 Glycoside hydrolase family 11, active site 2 Clocl_4159 IPR033123 Glycosyl hydrolases family 11 (GH11) domain Clocl_4159 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel Clocl_4159 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Clocl_4159 IPR008979 Galactose-binding-like domain superfamily Clocl_4159 IPR001137 Glycoside hydrolase family 11 Clocl_4161 IPR013783 Immunoglobulin-like fold Clocl_4161 IPR041624 Rhamnogalacturonan I lyase beta-sheet domain Clocl_4161 IPR034641 Polysaccharide lyase family 11 Clocl_4167 IPR028082 Periplasmic binding protein-like I Clocl_4167 IPR010982 Lambda repressor-like, DNA-binding domain superfamily Clocl_4167 IPR000843 LacI-type HTH domain Clocl_4168 IPR003742 RNA methyltransferase RlmH Clocl_4168 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Clocl_4168 IPR029028 Alpha/beta knot methyltransferases Clocl_4169 IPR001279 Metallo-beta-lactamase Clocl_4169 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Clocl_4170 IPR036968 Enolpyruvate transferase domain superfamily Clocl_4170 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta Clocl_4170 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase Clocl_4170 IPR001986 Enolpyruvate transferase domain Clocl_4174 IPR003660 HAMP domain Clocl_4174 IPR003594 Histidine kinase/HSP90-like ATPase Clocl_4174 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clocl_4174 IPR005467 Histidine kinase domain Clocl_4174 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Clocl_4174 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Clocl_4174 IPR000700 PAS-associated, C-terminal Clocl_4174 IPR000014 PAS domain Clocl_4174 IPR035965 PAS domain superfamily Clocl_4174 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Clocl_4174 IPR001610 PAC motif Clocl_4175 IPR016032 Signal transduction response regulator, C-terminal effector Clocl_4175 IPR001867 OmpR/PhoB-type DNA-binding domain Clocl_4175 IPR011006 CheY-like superfamily Clocl_4175 IPR001789 Signal transduction response regulator, receiver domain Clocl_4175 IPR036388 Winged helix-like DNA-binding domain superfamily Clocl_4175 IPR039420 Transcriptional regulatory protein WalR-like Clocl_4179 IPR020004 UDP-N-acetylglucosamine 2-epimerase,UDP-hydrolysing Clocl_4179 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Clocl_4179 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like Clocl_4180 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily Clocl_4180 IPR013974 SAF domain Clocl_4180 IPR013132 N-acetylneuraminic acid synthase, N-terminal Clocl_4180 IPR020007 N-acetylneuraminate synthase Clocl_4180 IPR013785 Aldolase-type TIM barrel Clocl_4180 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal Clocl_4182 IPR005835 Nucleotidyl transferase domain Clocl_4182 IPR029044 Nucleotide-diphospho-sugar transferases Clocl_4182 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type Clocl_4183 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase Clocl_4183 IPR015424 Pyridoxal phosphate-dependent transferase Clocl_4183 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Clocl_4183 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Clocl_4184 IPR016040 NAD(P)-binding domain Clocl_4184 IPR036291 NAD(P)-binding domain superfamily Clocl_4185 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clocl_4185 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain Clocl_4185 IPR036291 NAD(P)-binding domain superfamily Clocl_4191 IPR036291 NAD(P)-binding domain superfamily Clocl_4191 IPR016040 NAD(P)-binding domain Clocl_4191 IPR005888 dTDP-glucose 4,6-dehydratase Clocl_4192 IPR029044 Nucleotide-diphospho-sugar transferases Clocl_4192 IPR001173 Glycosyltransferase 2-like Clocl_4194 IPR029044 Nucleotide-diphospho-sugar transferases Clocl_4194 IPR001173 Glycosyltransferase 2-like Clocl_4196 IPR001509 NAD-dependent epimerase/dehydratase Clocl_4196 IPR036291 NAD(P)-binding domain superfamily Clocl_4198 IPR003362 Bacterial sugar transferase Clocl_4201 IPR005701 Polysaccharide export protein MPA1-like Clocl_4201 IPR003856 Polysaccharide chain length determinant N-terminal domain Clocl_4204 IPR038300 SASP, alpha/beta-type superfamily Clocl_4204 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site Clocl_4204 IPR001448 Small acid-soluble spore protein, alpha/beta-type Clocl_4205 IPR042047 Cell wall hydrolase SleB, domain 1 Clocl_4205 IPR011105 Cell wall hydrolase, SleB Clocl_4207 IPR000644 CBS domain Clocl_4210 IPR024937 Domain X Clocl_4210 IPR000477 Reverse transcriptase domain Clocl_4211 IPR013783 Immunoglobulin-like fold Clocl_4211 IPR002102 Cellulosome anchoring protein, cohesin domain Clocl_4211 IPR001956 Carbohydrate-binding module 3 Clocl_4211 IPR036966 Carbohydrate-binding module 3 superfamily Clocl_4211 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clocl_4211 IPR005102 Carbohydrate binding X2 domain Clocl_4211 IPR014756 Immunoglobulin E-set Clocl_4212 IPR013783 Immunoglobulin-like fold Clocl_4212 IPR014756 Immunoglobulin E-set Clocl_4212 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clocl_4212 IPR001956 Carbohydrate-binding module 3 Clocl_4212 IPR036966 Carbohydrate-binding module 3 superfamily Clocl_4212 IPR002102 Cellulosome anchoring protein, cohesin domain Clocl_4212 IPR005102 Carbohydrate binding X2 domain Clocl_4213 IPR013785 Aldolase-type TIM barrel Clocl_4213 IPR004393 Nicotinate-nucleotide pyrophosphorylase Clocl_4213 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Clocl_4213 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal Clocl_4213 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily Clocl_4213 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal Clocl_4213 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal Clocl_4214 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Clocl_4214 IPR005288 L-aspartate oxidase Clocl_4214 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal Clocl_4214 IPR036188 FAD/NAD(P)-binding domain superfamily Clocl_4214 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Clocl_4214 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily Clocl_4215 IPR003473 Quinolinate synthetase A Clocl_4215 IPR036094 Quinolinate synthetase A superfamily Clocl_4215 IPR023066 Quinolinate synthase A, type 2 Clocl_4221 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily Clocl_4221 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta Clocl_4221 IPR013760 DNA topoisomerase, type IIA-like domain superfamily Clocl_4221 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal Clocl_4221 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat Clocl_4221 IPR005743 DNA gyrase, subunit A Clocl_4221 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal Clocl_4222 IPR041468 ParB/Spo0J, HTH domain Clocl_4222 IPR023705 Nucleoid occlusion protein Clocl_4222 IPR004437 ParB/RepB/Spo0J partition protein Clocl_4222 IPR003115 ParB/Sulfiredoxin Clocl_4222 IPR036086 ParB/Sulfiredoxin superfamily Clocl_4223 IPR003682 rRNA small subunit methyltransferase G Clocl_4223 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clocl_4224 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related Clocl_4224 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG Clocl_4224 IPR020595 MnmG-related, conserved site Clocl_4224 IPR036188 FAD/NAD(P)-binding domain superfamily Clocl_4224 IPR026904 GidA associated domain 3 Clocl_4225 IPR031168 TrmE-type guanine nucleotide-binding domain Clocl_4225 IPR018948 GTP-binding protein TrmE, N-terminal Clocl_4225 IPR006073 GTP binding domain Clocl_4225 IPR004520 tRNA modification GTPase MnmE Clocl_4225 IPR027368 tRNA modification GTPase MnmE domain 2 Clocl_4225 IPR025867 MnmE, helical domain Clocl_4225 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clocl_4225 IPR005225 Small GTP-binding protein domain Clocl_4225 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 Clocl_4226 IPR034079 Jag, R3H domain Clocl_4226 IPR036867 R3H domain superfamily Clocl_4226 IPR001374 R3H domain Clocl_4226 IPR015946 K homology domain-like, alpha/beta Clocl_4226 IPR038008 Jag, KH domain Clocl_4226 IPR032782 Jag, N-terminal Clocl_4226 IPR039247 Jag protein Clocl_4226 IPR038247 Jag, N-terminal domain superfamily Clocl_4227 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Clocl_4227 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 Clocl_4228 IPR002696 Putative membrane protein insertion efficiency factor Clocl_4229 IPR000100 Ribonuclease P Clocl_4229 IPR020568 Ribosomal protein S5 domain 2-type fold Clocl_4229 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Clocl_4230 IPR000271 Ribosomal protein L34