locus-tag class description HVS_00005 PF00308 Bacterial dnaA protein HVS_00005 PF08299 Bacterial dnaA protein helix-turn-helix HVS_00005 PF11638 DnaA N-terminal domain HVS_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain HVS_00010 PF02767 DNA polymerase III beta subunit, central domain HVS_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain HVS_00020 PF02463 RecF/RecN/SMC N terminal domain HVS_00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVS_00030 PF01751 Toprim domain HVS_00030 PF00204 DNA gyrase B HVS_00030 PF00986 DNA gyrase B subunit, carboxyl terminus HVS_00035 PF13614 AAA domain HVS_00040 PF17762 HTH domain found in ParB protein HVS_00040 PF02195 ParB-like nuclease domain HVS_00055 PF02403 Seryl-tRNA synthetase N-terminal domain HVS_00055 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HVS_00070 PF01066 CDP-alcohol phosphatidyltransferase HVS_00080 PF00395 S-layer homology domain HVS_00090 PF04294 VanW like protein HVS_00110 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase HVS_00120 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II HVS_00120 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg HVS_00125 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HVS_00155 PF01268 Formate--tetrahydrofolate ligase HVS_00175 PF08544 GHMP kinases C terminal HVS_00175 PF00288 GHMP kinases N terminal domain HVS_00180 PF07729 FCD domain HVS_00180 PF00392 Bacterial regulatory proteins, gntR family HVS_00190 PF00403 Heavy-metal-associated domain HVS_00195 PF01434 Peptidase family M41 HVS_00195 PF00004 ATPase family associated with various cellular activities (AAA) HVS_00195 PF17862 AAA+ lid domain HVS_00215 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase HVS_00215 PF00534 Glycosyl transferases group 1 HVS_00225 PF14620 YpeB sporulation HVS_00235 PF01695 IstB-like ATP binding protein HVS_00250 PF01547 Bacterial extracellular solute-binding protein HVS_00260 PF00528 Binding-protein-dependent transport system inner membrane component HVS_00265 PF00528 Binding-protein-dependent transport system inner membrane component HVS_00270 PF07694 5TMR of 5TMR-LYT HVS_00270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVS_00270 PF06580 Histidine kinase HVS_00275 PF04397 LytTr DNA-binding domain HVS_00275 PF00072 Response regulator receiver domain HVS_00310 PF00942 Cellulose binding domain HVS_00310 PF12891 Glycoside hydrolase family 44 HVS_00315 PF04542 Sigma-70 region 2 HVS_00315 PF08281 Sigma-70, region 4 HVS_00320 PF00331 Glycosyl hydrolase family 10 HVS_00320 PF12791 Anti-sigma factor N-terminus HVS_00325 PF00963 Cohesin domain HVS_00325 PF00395 S-layer homology domain HVS_00350 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HVS_00350 PF00391 PEP-utilising enzyme, mobile domain HVS_00360 PF02666 Phosphatidylserine decarboxylase HVS_00370 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HVS_00370 PF00391 PEP-utilising enzyme, mobile domain HVS_00380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HVS_00385 PF08281 Sigma-70, region 4 HVS_00385 PF04542 Sigma-70 region 2 HVS_00405 PF01965 DJ-1/PfpI family HVS_00410 PF00248 Aldo/keto reductase family HVS_00415 PF13419 Haloacid dehalogenase-like hydrolase HVS_00440 PF12072 Domain of unknown function (DUF3552) HVS_00440 PF00013 KH domain HVS_00440 PF01966 HD domain HVS_00460 PF07228 Stage II sporulation protein E (SpoIIE) HVS_00470 PF00331 Glycosyl hydrolase family 10 HVS_00470 PF00756 Putative esterase HVS_00470 PF00404 Dockerin type I domain HVS_00470 PF03422 Carbohydrate binding module (family 6) HVS_00475 PF00404 Dockerin type I domain HVS_00475 PF00756 Putative esterase HVS_00475 PF00331 Glycosyl hydrolase family 10 HVS_00475 PF03422 Carbohydrate binding module (family 6) HVS_00495 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HVS_00495 PF00460 Flagella basal body rod protein HVS_00500 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HVS_00500 PF00460 Flagella basal body rod protein HVS_00510 PF02743 Cache domain HVS_00510 PF00672 HAMP domain HVS_00510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HVS_00515 PF07977 FabA-like domain HVS_00520 PF01225 Mur ligase family, catalytic domain HVS_00520 PF02875 Mur ligase family, glutamate ligase domain HVS_00520 PF08245 Mur ligase middle domain HVS_00530 PF04026 SpoVG HVS_00535 PF00483 Nucleotidyl transferase HVS_00535 PF00132 Bacterial transferase hexapeptide (six repeats) HVS_00535 PF14602 Hexapeptide repeat of succinyl-transferase HVS_00540 PF14572 Phosphoribosyl synthetase-associated domain HVS_00540 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HVS_00545 PF01195 Peptidyl-tRNA hydrolase HVS_00550 PF00271 Helicase conserved C-terminal domain HVS_00550 PF17757 UvrB interaction domain HVS_00550 PF03461 TRCF domain HVS_00550 PF00270 DEAD/DEAH box helicase HVS_00550 PF02559 CarD-like/TRCF domain HVS_00560 PF15714 Stage V sporulation protein T C-terminal, transcription factor HVS_00560 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin HVS_00565 PF03819 MazG nucleotide pyrophosphohydrolase domain HVS_00570 PF00216 Bacterial DNA-binding protein HVS_00575 PF01479 S4 domain HVS_00580 PF07873 YabP family HVS_00595 PF00575 S1 RNA binding domain HVS_00600 PF00581 Rhodanese-like domain HVS_00605 PF00924 Mechanosensitive ion channel HVS_00610 PF05257 CHAP domain HVS_00610 PF01476 LysM domain HVS_00615 PF12671 Putative amidase domain HVS_00635 PF06866 Protein of unknown function (DUF1256) HVS_00640 PF00301 Rubredoxin HVS_00650 PF01740 STAS domain HVS_00660 PF12169 DNA polymerase III subunits gamma and tau domain III HVS_00665 PF02575 YbaB/EbfC DNA-binding family HVS_00670 PF13662 Toprim domain HVS_00670 PF02132 RecR protein HVS_00695 PF10609 NUBPL iron-transfer P-loop NTPase HVS_00700 PF02001 Protein of unknown function DUF134 HVS_00715 PF01451 Low molecular weight phosphotyrosine protein phosphatase HVS_00750 PF06782 Uncharacterised protein family (UPF0236) HVS_00790 PF13749 Putative ATP-dependent DNA helicase recG C-terminal HVS_00790 PF00270 DEAD/DEAH box helicase HVS_00790 PF17191 RecG wedge domain HVS_00810 PF06782 Uncharacterised protein family (UPF0236) HVS_00840 PF08721 TnsA endonuclease C terminal HVS_00840 PF08722 TnsA endonuclease N terminal HVS_00845 PF00665 Integrase core domain HVS_00850 PF13401 AAA domain HVS_00850 PF11426 Tn7 transposition regulator TnsC HVS_00880 PF00395 S-layer homology domain HVS_00880 PF00963 Cohesin domain HVS_01025 PF06013 Proteins of 100 residues with WXG HVS_01085 PF00872 Transposase, Mutator family HVS_01100 PF06782 Uncharacterised protein family (UPF0236) HVS_01110 PF05362 Lon protease (S16) C-terminal proteolytic domain HVS_01110 PF00004 ATPase family associated with various cellular activities (AAA) HVS_01110 PF02190 ATP-dependent protease La (LON) substrate-binding domain HVS_01160 PF00395 S-layer homology domain HVS_01160 PF00963 Cohesin domain HVS_01170 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HVS_01175 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HVS_01175 PF00205 Thiamine pyrophosphate enzyme, central domain HVS_01175 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HVS_01180 PF10369 Small subunit of acetolactate synthase HVS_01185 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain HVS_01185 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain HVS_01190 PF08502 LeuA allosteric (dimerisation) domain HVS_01190 PF00682 HMGL-like HVS_01195 PF08502 LeuA allosteric (dimerisation) domain HVS_01195 PF00682 HMGL-like HVS_01200 PF04542 Sigma-70 region 2 HVS_01205 PF00128 Alpha amylase, catalytic domain HVS_01205 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HVS_01205 PF02806 Alpha amylase, C-terminal all-beta domain HVS_01210 PF01979 Amidohydrolase family HVS_01215 PF00990 Diguanylate cyclase, GGDEF domain HVS_01215 PF00072 Response regulator receiver domain HVS_01220 PF01250 Ribosomal protein S6 HVS_01225 PF00436 Single-strand binding protein family HVS_01230 PF01084 Ribosomal protein S18 HVS_01235 PF03631 Virulence factor BrkB HVS_01240 PF00483 Nucleotidyl transferase HVS_01265 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HVS_01265 PF07498 Rho termination factor, N-terminal domain HVS_01265 PF07497 Rho termination factor, RNA-binding domain HVS_01270 PF01197 Ribosomal protein L31 HVS_01280 PF01813 ATP synthase subunit D HVS_01285 PF02874 ATP synthase alpha/beta family, beta-barrel domain HVS_01285 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HVS_01290 PF02874 ATP synthase alpha/beta family, beta-barrel domain HVS_01290 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HVS_01290 PF16886 ATPsynthase alpha/beta subunit N-term extension HVS_01295 PF01990 ATP synthase (F/14-kDa) subunit HVS_01300 PF01992 ATP synthase (C/AC39) subunit HVS_01305 PF01991 ATP synthase (E/31 kDa) subunit HVS_01310 PF00137 ATP synthase subunit C HVS_01315 PF01496 V-type ATPase 116kDa subunit family HVS_01325 PF01842 ACT domain HVS_01325 PF01817 Chorismate mutase type II HVS_01325 PF00800 Prephenate dehydratase HVS_01335 PF02272 DHHA1 domain HVS_01335 PF01368 DHH family HVS_01340 PF03948 Ribosomal protein L9, C-terminal domain HVS_01340 PF01281 Ribosomal protein L9, N-terminal domain HVS_01345 PF00772 DnaB-like helicase N terminal domain HVS_01345 PF03796 DnaB-like helicase C terminal domain HVS_01350 PF11734 TilS substrate C-terminal domain HVS_01350 PF01171 PP-loop family HVS_01355 PF00156 Phosphoribosyl transferase domain HVS_01360 PF06480 FtsH Extracellular HVS_01360 PF17862 AAA+ lid domain HVS_01360 PF00004 ATPase family associated with various cellular activities (AAA) HVS_01360 PF01434 Peptidase family M41 HVS_01365 PF02773 S-adenosylmethionine synthetase, C-terminal domain HVS_01365 PF02772 S-adenosylmethionine synthetase, central domain HVS_01365 PF00438 S-adenosylmethionine synthetase, N-terminal domain HVS_01390 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain HVS_01390 PF14490 Helix-hairpin-helix containing domain HVS_01390 PF13538 UvrD-like helicase C-terminal domain HVS_01395 PF00156 Phosphoribosyl transferase domain HVS_01415 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HVS_01415 PF00460 Flagella basal body rod protein HVS_01425 PF00669 Bacterial flagellin N-terminal helical region HVS_01425 PF00700 Bacterial flagellin C-terminal helical region HVS_01435 PF02623 FliW protein HVS_01440 PF02599 Global regulator protein family HVS_01445 PF00669 Bacterial flagellin N-terminal helical region HVS_01445 PF00700 Bacterial flagellin C-terminal helical region HVS_01455 PF01973 Protein of unknown function DUF115 HVS_01460 PF02719 Polysaccharide biosynthesis protein HVS_01465 PF02348 Cytidylyltransferase HVS_01470 PF02911 Formyl transferase, C-terminal domain HVS_01470 PF00551 Formyl transferase HVS_01475 PF03102 NeuB family HVS_01475 PF08666 SAF domain HVS_01480 PF02911 Formyl transferase, C-terminal domain HVS_01480 PF00551 Formyl transferase HVS_01500 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HVS_01510 PF02348 Cytidylyltransferase HVS_01560 PF01695 IstB-like ATP binding protein HVS_01580 PF02384 N-6 DNA Methylase HVS_01590 PF01420 Type I restriction modification DNA specificity domain HVS_01595 PF18766 SWI2/SNF2 ATPase HVS_01595 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) HVS_01595 PF11867 Domain of unknown function (DUF3387) HVS_01605 PF00665 Integrase core domain HVS_01615 PF03354 Phage Terminase HVS_01630 PF01432 Peptidase family M3 HVS_01630 PF08439 Oligopeptidase F HVS_01635 PF03424 Carbohydrate binding domain (family 17/28) HVS_01635 PF00150 Cellulase (glycosyl hydrolase family 5) HVS_01635 PF00395 S-layer homology domain HVS_01645 PF00950 ABC 3 transport family HVS_01650 PF00950 ABC 3 transport family HVS_01655 PF00005 ABC transporter HVS_01660 PF01297 Zinc-uptake complex component A periplasmic HVS_01665 PF00571 CBS domain HVS_01665 PF03448 MgtE intracellular N domain HVS_01665 PF01769 Divalent cation transporter HVS_01670 PF14437 MafB19-like deaminase HVS_01685 PF00037 4Fe-4S binding domain HVS_01685 PF13187 4Fe-4S dicluster domain HVS_01685 PF04060 Putative Fe-S cluster HVS_01690 PF02508 Rnf-Nqr subunit, membrane protein HVS_01695 PF02508 Rnf-Nqr subunit, membrane protein HVS_01700 PF04205 FMN-binding domain HVS_01705 PF03116 NQR2, RnfD, RnfE family HVS_01710 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HVS_01710 PF13237 4Fe-4S dicluster domain HVS_01710 PF13375 RnfC Barrel sandwich hybrid domain HVS_01710 PF10531 SLBB domain HVS_01715 PF05175 Methyltransferase small domain HVS_01715 PF17827 PrmC N-terminal domain HVS_01720 PF07136 Protein of unknown function (DUF1385) HVS_01725 PF13677 Membrane MotB of proton-channel complex MotA/MotB HVS_01725 PF00691 OmpA family HVS_01730 PF01618 MotA/TolQ/ExbB proton channel family HVS_01745 PF02927 Cellulase N-terminal ig-like domain HVS_01745 PF00404 Dockerin type I domain HVS_01745 PF00759 Glycosyl hydrolase family 9 HVS_01765 PF07478 D-ala D-ala ligase C-terminus HVS_01765 PF01820 D-ala D-ala ligase N-terminus HVS_01770 PF01177 Asp/Glu/Hydantoin racemase HVS_01780 PF00750 tRNA synthetases class I (R) HVS_01780 PF03485 Arginyl tRNA synthetase N terminal domain HVS_01780 PF05746 DALR anticodon binding domain HVS_01785 PF12833 Helix-turn-helix domain HVS_01795 PF03424 Carbohydrate binding domain (family 17/28) HVS_01795 PF00150 Cellulase (glycosyl hydrolase family 5) HVS_01795 PF00395 S-layer homology domain HVS_01800 PF13180 PDZ domain HVS_01800 PF03572 Peptidase family S41 HVS_01805 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HVS_01805 PF18267 Rubredoxin NAD+ reductase C-terminal domain HVS_01805 PF07992 Pyridine nucleotide-disulphide oxidoreductase HVS_01805 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HVS_01805 PF04324 BFD-like [2Fe-2S] binding domain HVS_01815 PF00483 Nucleotidyl transferase HVS_01820 PF17674 HHH domain HVS_01820 PF00575 S1 RNA binding domain HVS_01820 PF09371 Tex-like protein N-terminal domain HVS_01820 PF16921 Tex protein YqgF-like domain HVS_01830 PF07486 Cell Wall Hydrolase HVS_01830 PF01471 Putative peptidoglycan binding domain HVS_01850 PF02683 Cytochrome C biogenesis protein transmembrane region HVS_01855 PF00578 AhpC/TSA family HVS_01870 PF07992 Pyridine nucleotide-disulphide oxidoreductase HVS_01875 PF00462 Glutaredoxin HVS_01880 PF00128 Alpha amylase, catalytic domain HVS_01880 PF02903 Alpha amylase, N-terminal ig-like domain HVS_01880 PF00395 S-layer homology domain HVS_01920 PF02371 Transposase IS116/IS110/IS902 family HVS_01920 PF01548 Transposase HVS_01945 PF00395 S-layer homology domain HVS_01945 PF00963 Cohesin domain HVS_01950 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HVS_01960 PF00082 Subtilase family HVS_01990 PF06782 Uncharacterised protein family (UPF0236) HVS_02000 PF05593 RHS Repeat HVS_02190 PF02001 Protein of unknown function DUF134 HVS_02200 PF10609 NUBPL iron-transfer P-loop NTPase HVS_02205 PF00501 AMP-binding enzyme HVS_02210 PF00005 ABC transporter HVS_02225 PF00486 Transcriptional regulatory protein, C terminal HVS_02225 PF00072 Response regulator receiver domain HVS_02230 PF00486 Transcriptional regulatory protein, C terminal HVS_02230 PF00072 Response regulator receiver domain HVS_02240 PF00512 His Kinase A (phospho-acceptor) domain HVS_02240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVS_02245 PF00465 Iron-containing alcohol dehydrogenase HVS_02250 PF00004 ATPase family associated with various cellular activities (AAA) HVS_02250 PF17862 AAA+ lid domain HVS_02250 PF01434 Peptidase family M41 HVS_02255 PF00005 ABC transporter HVS_02285 PF00563 EAL domain HVS_02285 PF00990 Diguanylate cyclase, GGDEF domain HVS_02285 PF03707 Bacterial signalling protein N terminal repeat HVS_02305 PF00403 Heavy-metal-associated domain HVS_02310 PF00403 Heavy-metal-associated domain HVS_02315 PF03772 Competence protein HVS_02315 PF13567 Domain of unknown function (DUF4131) HVS_02315 PF00753 Metallo-beta-lactamase superfamily HVS_02325 PF02525 Flavodoxin-like fold HVS_02340 PF08125 Mannitol dehydrogenase C-terminal domain HVS_02340 PF01232 Mannitol dehydrogenase Rossmann domain HVS_02345 PF03786 D-mannonate dehydratase (UxuA) HVS_02350 PF01081 KDPG and KHG aldolase HVS_02365 PF00072 Response regulator receiver domain HVS_02365 PF12833 Helix-turn-helix domain HVS_02370 PF02743 Cache domain HVS_02370 PF06580 Histidine kinase HVS_02370 PF00672 HAMP domain HVS_02370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVS_02375 PF12833 Helix-turn-helix domain HVS_02375 PF00072 Response regulator receiver domain HVS_02375 PF12833 Helix-turn-helix domain HVS_02375 PF00072 Response regulator receiver domain HVS_02385 PF00528 Binding-protein-dependent transport system inner membrane component HVS_02390 PF00528 Binding-protein-dependent transport system inner membrane component HVS_02395 PF07477 Glycosyl hydrolase family 67 C-terminus HVS_02395 PF03648 Glycosyl hydrolase family 67 N-terminus HVS_02395 PF07488 Glycosyl hydrolase family 67 middle domain HVS_02400 PF07691 PA14 domain HVS_02400 PF01915 Glycosyl hydrolase family 3 C-terminal domain HVS_02400 PF14310 Fibronectin type III-like domain HVS_02400 PF00933 Glycosyl hydrolase family 3 N terminal domain HVS_02405 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HVS_02405 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HVS_02410 PF01261 Xylose isomerase-like TIM barrel HVS_02415 PF01263 Aldose 1-epimerase HVS_02420 PF01053 Cys/Met metabolism PLP-dependent enzyme HVS_02425 PF01594 AI-2E family transporter HVS_02430 PF00625 Guanylate kinase HVS_02435 PF00291 Pyridoxal-phosphate dependent enzyme HVS_02440 PF00290 Tryptophan synthase alpha chain HVS_02445 PF00395 S-layer homology domain HVS_02445 PF00963 Cohesin domain HVS_02450 PF01471 Putative peptidoglycan binding domain HVS_02450 PF07486 Cell Wall Hydrolase HVS_02460 PF01471 Putative peptidoglycan binding domain HVS_02460 PF07486 Cell Wall Hydrolase HVS_02470 PF00285 Citrate synthase, C-terminal domain HVS_02475 PF04397 LytTr DNA-binding domain HVS_02475 PF00072 Response regulator receiver domain HVS_02495 PF00512 His Kinase A (phospho-acceptor) domain HVS_02495 PF00989 PAS fold HVS_02495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVS_02505 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HVS_02505 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HVS_02505 PF01842 ACT domain HVS_02510 PF05979 Bacterial protein of unknown function (DUF896) HVS_02520 PF07726 ATPase family associated with various cellular activities (AAA) HVS_02520 PF17863 AAA lid domain HVS_02530 PF11992 Domain of unknown function (DUF3488) HVS_02530 PF13559 Domain of unknown function (DUF4129) HVS_02530 PF01841 Transglutaminase-like superfamily HVS_02540 PF01580 FtsK/SpoIIIE family HVS_02540 PF09397 Ftsk gamma domain HVS_02540 PF17854 FtsK alpha domain HVS_02545 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HVS_02545 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HVS_02545 PF02142 MGS-like domain HVS_02560 PF01098 Cell cycle protein HVS_02565 PF00905 Penicillin binding protein transpeptidase domain HVS_02570 PF02666 Phosphatidylserine decarboxylase HVS_02575 PF13419 Haloacid dehalogenase-like hydrolase HVS_02580 PF00942 Cellulose binding domain HVS_02580 PF00759 Glycosyl hydrolase family 9 HVS_02585 PF00404 Dockerin type I domain HVS_02585 PF00963 Cohesin domain HVS_02585 PF00942 Cellulose binding domain HVS_02590 PF00963 Cohesin domain HVS_02590 PF00395 S-layer homology domain HVS_02595 PF00395 S-layer homology domain HVS_02595 PF00963 Cohesin domain HVS_02600 PF00963 Cohesin domain HVS_02600 PF00395 S-layer homology domain HVS_02605 PF00963 Cohesin domain HVS_02605 PF00395 S-layer homology domain HVS_02635 PF02861 Clp amino terminal domain, pathogenicity island component HVS_02635 PF07724 AAA domain (Cdc48 subfamily) HVS_02635 PF00004 ATPase family associated with various cellular activities (AAA) HVS_02635 PF10431 C-terminal, D2-small domain, of ClpB protein HVS_02635 PF17871 AAA lid domain HVS_02660 PF00933 Glycosyl hydrolase family 3 N terminal domain HVS_02660 PF01915 Glycosyl hydrolase family 3 C-terminal domain HVS_02670 PF00672 HAMP domain HVS_02670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HVS_02670 PF02203 Tar ligand binding domain homologue HVS_02685 PF08264 Anticodon-binding domain of tRNA HVS_02685 PF00133 tRNA synthetases class I (I, L, M and V) HVS_02685 PF10458 Valyl tRNA synthetase tRNA binding arm HVS_02690 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain HVS_02690 PF01488 Shikimate / quinate 5-dehydrogenase HVS_02695 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain HVS_02695 PF01488 Shikimate / quinate 5-dehydrogenase HVS_02700 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain HVS_02700 PF03900 Porphobilinogen deaminase, C-terminal domain HVS_02705 PF02602 Uroporphyrinogen-III synthase HemD HVS_02705 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HVS_02710 PF00490 Delta-aminolevulinic acid dehydratase HVS_02715 PF00202 Aminotransferase class-III HVS_02720 PF02540 NAD synthase HVS_02720 PF00795 Carbon-nitrogen hydrolase HVS_02730 PF00005 ABC transporter HVS_02735 PF00528 Binding-protein-dependent transport system inner membrane component HVS_02740 PF00899 ThiF family HVS_02760 PF01053 Cys/Met metabolism PLP-dependent enzyme HVS_02775 PF01507 Phosphoadenosine phosphosulfate reductase family HVS_02780 PF00009 Elongation factor Tu GTP binding domain HVS_02800 PF00009 Elongation factor Tu GTP binding domain HVS_02800 PF03144 Elongation factor Tu domain 2 HVS_02800 PF16658 Class II release factor RF3, C-terminal domain HVS_02805 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HVS_02805 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HVS_02805 PF02824 TGS domain HVS_02805 PF03129 Anticodon binding domain HVS_02815 PF13581 Histidine kinase-like ATPase domain HVS_02835 PF06782 Uncharacterised protein family (UPF0236) HVS_02840 PF04607 Region found in RelA / SpoT proteins HVS_02845 PF00005 ABC transporter HVS_02855 PF00572 Ribosomal protein L13 HVS_02860 PF00380 Ribosomal protein S9/S16 HVS_02875 PF01695 IstB-like ATP binding protein HVS_02880 PF00665 Integrase core domain HVS_02925 PF02899 Phage integrase, N-terminal SAM-like domain HVS_02925 PF00589 Phage integrase family HVS_02930 PF06782 Uncharacterised protein family (UPF0236) HVS_02940 PF00270 DEAD/DEAH box helicase HVS_02940 PF08148 DSHCT (NUC185) domain HVS_02940 PF00271 Helicase conserved C-terminal domain HVS_02945 PF01022 Bacterial regulatory protein, arsR family HVS_02950 PF00005 ABC transporter HVS_02960 PF00571 CBS domain HVS_02960 PF03471 Transporter associated domain HVS_02960 PF01595 Cyclin M transmembrane N-terminal domain HVS_02965 PF05362 Lon protease (S16) C-terminal proteolytic domain HVS_02965 PF00004 ATPase family associated with various cellular activities (AAA) HVS_02965 PF02190 ATP-dependent protease La (LON) substrate-binding domain HVS_03005 PF01022 Bacterial regulatory protein, arsR family HVS_03010 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family HVS_03015 PF03965 Penicillinase repressor HVS_03025 PF05593 RHS Repeat HVS_03030 PF00072 Response regulator receiver domain HVS_03030 PF00486 Transcriptional regulatory protein, C terminal HVS_03045 PF06782 Uncharacterised protein family (UPF0236) HVS_03060 PF01381 Helix-turn-helix HVS_03095 PF00072 Response regulator receiver domain HVS_03095 PF00486 Transcriptional regulatory protein, C terminal HVS_03100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVS_03100 PF00512 His Kinase A (phospho-acceptor) domain HVS_03105 PF00005 ABC transporter HVS_03145 PF12833 Helix-turn-helix domain HVS_03145 PF06445 GyrI-like small molecule binding domain HVS_03160 PF00072 Response regulator receiver domain HVS_03160 PF00486 Transcriptional regulatory protein, C terminal HVS_03165 PF00005 ABC transporter HVS_03175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVS_03175 PF00512 His Kinase A (phospho-acceptor) domain HVS_03205 PF00872 Transposase, Mutator family HVS_03230 PF00963 Cohesin domain HVS_03230 PF00395 S-layer homology domain HVS_03250 PF01979 Amidohydrolase family HVS_03255 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE HVS_03260 PF00814 Glycoprotease family HVS_03265 PF00583 Acetyltransferase (GNAT) family HVS_03270 PF05362 Lon protease (S16) C-terminal proteolytic domain HVS_03270 PF13654 AAA domain HVS_03285 PF00580 UvrD/REP helicase N-terminal domain HVS_03285 PF13361 UvrD-like helicase C-terminal domain HVS_03295 PF00301 Rubredoxin HVS_03295 PF00753 Metallo-beta-lactamase superfamily HVS_03295 PF00258 Flavodoxin HVS_03300 PF03641 Possible lysine decarboxylase HVS_03305 PF00696 Amino acid kinase family HVS_03320 PF00912 Transglycosylase HVS_03320 PF00905 Penicillin binding protein transpeptidase domain HVS_03340 PF01551 Peptidase family M23 HVS_03340 PF08525 Opacity-associated protein A N-terminal motif HVS_03340 PF01476 LysM domain HVS_03350 PF01032 FecCD transport family HVS_03355 PF00005 ABC transporter HVS_03370 PF01593 Flavin containing amine oxidoreductase HVS_03380 PF00150 Cellulase (glycosyl hydrolase family 5) HVS_03380 PF00404 Dockerin type I domain HVS_03385 PF00884 Sulfatase HVS_03390 PF00224 Pyruvate kinase, barrel domain HVS_03390 PF02887 Pyruvate kinase, alpha/beta domain HVS_03390 PF00391 PEP-utilising enzyme, mobile domain HVS_03395 PF04616 Glycosyl hydrolases family 43 HVS_03400 PF03330 Lytic transglycolase HVS_03410 PF06782 Uncharacterised protein family (UPF0236) HVS_03415 PF18277 AbrB C-terminal domain HVS_03415 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin HVS_03435 PF00330 Aconitase family (aconitate hydratase) HVS_03440 PF00694 Aconitase C-terminal domain HVS_03445 PF04055 Radical SAM superfamily HVS_03460 PF03611 PTS system sugar-specific permease component HVS_03480 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family HVS_03485 PF12849 PBP superfamily domain HVS_03505 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HVS_03505 PF13457 GW (Gly-Tryp) dipeptide domain HVS_03530 PF01471 Putative peptidoglycan binding domain HVS_03530 PF04717 Type VI secretion system, phage-baseplate injector HVS_03550 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HVS_03550 PF13457 GW (Gly-Tryp) dipeptide domain HVS_03550 PF01510 N-acetylmuramoyl-L-alanine amidase HVS_03620 PF00877 NlpC/P60 family HVS_03620 PF08239 Bacterial SH3 domain HVS_03620 PF01476 LysM domain HVS_03650 PF01348 Type II intron maturase HVS_03650 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HVS_03680 PF01022 Bacterial regulatory protein, arsR family HVS_03690 PF06782 Uncharacterised protein family (UPF0236) HVS_03695 PF00082 Subtilase family HVS_03700 PF00082 Subtilase family HVS_03720 PF06782 Uncharacterised protein family (UPF0236) HVS_03730 PF00137 ATP synthase subunit C HVS_03740 PF02874 ATP synthase alpha/beta family, beta-barrel domain HVS_03740 PF00306 ATP synthase alpha/beta chain, C terminal domain HVS_03740 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HVS_03745 PF00231 ATP synthase HVS_03750 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HVS_03750 PF02874 ATP synthase alpha/beta family, beta-barrel domain HVS_03755 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain HVS_03755 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain HVS_03765 PF00436 Single-strand binding protein family HVS_03770 PF00149 Calcineurin-like phosphoesterase HVS_03795 PF01867 CRISPR associated protein Cas1 HVS_03810 PF01464 Transglycosylase SLT domain HVS_03810 PF10145 Phage-related minor tail protein HVS_03810 PF01551 Peptidase family M23 HVS_03820 PF02583 Metal-sensitive transcriptional repressor HVS_03825 PF01022 Bacterial regulatory protein, arsR family HVS_03830 PF00403 Heavy-metal-associated domain HVS_03845 PF00395 S-layer homology domain HVS_03845 PF00963 Cohesin domain HVS_03850 PF00942 Cellulose binding domain HVS_03850 PF00963 Cohesin domain HVS_03850 PF00404 Dockerin type I domain HVS_04105 PF06782 Uncharacterised protein family (UPF0236) HVS_04180 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HVS_04180 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HVS_04185 PF04474 Protein of unknown function (DUF554) HVS_04190 PF01212 Beta-eliminating lyase HVS_04195 PF17284 Spermidine synthase tetramerisation domain HVS_04205 PF02342 TerD domain HVS_04210 PF02342 TerD domain HVS_04225 PF00942 Cellulose binding domain HVS_04225 PF00404 Dockerin type I domain HVS_04225 PF00759 Glycosyl hydrolase family 9 HVS_04230 PF00942 Cellulose binding domain HVS_04230 PF00759 Glycosyl hydrolase family 9 HVS_04235 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HVS_04235 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HVS_04245 PF13538 UvrD-like helicase C-terminal domain HVS_04245 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain HVS_04245 PF14490 Helix-hairpin-helix containing domain HVS_04250 PF00270 DEAD/DEAH box helicase HVS_04250 PF00570 HRDC domain HVS_04250 PF16124 RecQ zinc-binding HVS_04250 PF09382 RQC domain HVS_04250 PF00271 Helicase conserved C-terminal domain HVS_04255 PF00483 Nucleotidyl transferase HVS_04270 PF03109 ABC1 family HVS_04275 PF04041 beta-1,4-mannooligosaccharide phosphorylase HVS_04280 PF00534 Glycosyl transferases group 1 HVS_04280 PF00862 Sucrose synthase HVS_04285 PF13538 UvrD-like helicase C-terminal domain HVS_04290 PF00226 DnaJ domain HVS_04290 PF01556 DnaJ C terminal domain HVS_04295 PF10431 C-terminal, D2-small domain, of ClpB protein HVS_04295 PF02861 Clp amino terminal domain, pathogenicity island component HVS_04295 PF17871 AAA lid domain HVS_04295 PF07724 AAA domain (Cdc48 subfamily) HVS_04295 PF00004 ATPase family associated with various cellular activities (AAA) HVS_04305 PF13817 IS66 C-terminal element HVS_04305 PF13007 Transposase C of IS166 homeodomain HVS_04305 PF03050 Transposase IS66 family HVS_04305 PF13005 zinc-finger binding domain of transposase IS66 HVS_04320 PF05362 Lon protease (S16) C-terminal proteolytic domain HVS_04320 PF00004 ATPase family associated with various cellular activities (AAA) HVS_04320 PF02190 ATP-dependent protease La (LON) substrate-binding domain HVS_04350 PF00963 Cohesin domain HVS_04350 PF00395 S-layer homology domain HVS_04395 PF00664 ABC transporter transmembrane region HVS_04395 PF00005 ABC transporter HVS_04395 PF03412 Peptidase C39 family HVS_04410 PF06782 Uncharacterised protein family (UPF0236) HVS_04415 PF06782 Uncharacterised protein family (UPF0236) HVS_04430 PF01609 Transposase DDE domain HVS_04430 PF13808 DDE_Tnp_1-associated HVS_04445 PF02719 Polysaccharide biosynthesis protein HVS_04450 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HVS_04450 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HVS_04465 PF02348 Cytidylyltransferase HVS_04475 PF16221 winged helix-turn-helix HVS_04475 PF16254 Domain of unknown function (DUF4910) HVS_04475 PF09940 Domain of unknown function (DUF2172) HVS_04485 PF03102 NeuB family HVS_04485 PF08666 SAF domain HVS_04515 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HVS_04520 PF16363 GDP-mannose 4,6 dehydratase HVS_04590 PF03323 Bacillus/Clostridium GerA spore germination protein HVS_04600 PF00005 ABC transporter HVS_04610 PF00005 ABC transporter HVS_04610 PF02687 FtsX-like permease family HVS_04610 PF12704 MacB-like periplasmic core domain HVS_04620 PF03323 Bacillus/Clostridium GerA spore germination protein HVS_04645 PF13495 Phage integrase, N-terminal SAM-like domain HVS_04645 PF00589 Phage integrase family HVS_04675 PF06782 Uncharacterised protein family (UPF0236) HVS_04710 PF03354 Phage Terminase HVS_04725 PF04860 Phage portal protein HVS_04760 PF00005 ABC transporter HVS_04760 PF13732 Domain of unknown function (DUF4162) HVS_04775 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain HVS_04775 PF17770 Ribonuclease J C-terminal domain HVS_04775 PF00753 Metallo-beta-lactamase superfamily HVS_04790 PF05362 Lon protease (S16) C-terminal proteolytic domain HVS_04790 PF02190 ATP-dependent protease La (LON) substrate-binding domain HVS_04790 PF00004 ATPase family associated with various cellular activities (AAA) HVS_04835 PF00817 impB/mucB/samB family HVS_04835 PF11799 impB/mucB/samB family C-terminal domain HVS_04840 PF04542 Sigma-70 region 2 HVS_04845 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain HVS_04845 PF12791 Anti-sigma factor N-terminus HVS_04850 PF00404 Dockerin type I domain HVS_04850 PF00756 Putative esterase HVS_04850 PF00331 Glycosyl hydrolase family 10 HVS_04850 PF02018 Carbohydrate binding domain HVS_04875 PF00395 S-layer homology domain HVS_04885 PF00544 Pectate lyase HVS_04890 PF00356 Bacterial regulatory proteins, lacI family HVS_04895 PF02146 Sir2 family HVS_04905 PF00501 AMP-binding enzyme HVS_04905 PF13193 AMP-binding enzyme C-terminal domain HVS_04915 PF00501 AMP-binding enzyme HVS_04915 PF13193 AMP-binding enzyme C-terminal domain HVS_04925 PF00588 SpoU rRNA Methylase family HVS_04925 PF04705 Thiostrepton-resistance methylase, N terminus HVS_04935 PF00005 ABC transporter HVS_04955 PF00266 Aminotransferase class-V HVS_04965 PF00759 Glycosyl hydrolase family 9 HVS_04965 PF00942 Cellulose binding domain HVS_04980 PF09827 CRISPR associated protein Cas2 HVS_04990 PF01867 CRISPR associated protein Cas1 HVS_05000 PF18395 Cas3 C-terminal domain HVS_05000 PF00270 DEAD/DEAH box helicase HVS_05000 PF18019 HD domain HVS_05070 PF04239 Protein of unknown function (DUF421) HVS_05075 PF03862 SpoVAC/SpoVAEB sporulation membrane protein HVS_05080 PF07451 Stage V sporulation protein AD (SpoVAD) HVS_05085 PF03862 SpoVAC/SpoVAEB sporulation membrane protein HVS_05105 PF00171 Aldehyde dehydrogenase family HVS_05110 PF07943 Penicillin-binding protein 5, C-terminal domain HVS_05110 PF00768 D-alanyl-D-alanine carboxypeptidase HVS_05135 PF01734 Patatin-like phospholipase HVS_05150 PF02675 S-adenosylmethionine decarboxylase HVS_05155 PF02541 Ppx/GppA phosphatase family HVS_05155 PF01761 3-dehydroquinate synthase HVS_05160 PF13089 Polyphosphate kinase N-terminal domain HVS_05160 PF02503 Polyphosphate kinase middle domain HVS_05160 PF13090 Polyphosphate kinase C-terminal domain 2 HVS_05160 PF17941 Polyphosphate kinase C-terminal domain 1 HVS_05165 PF10672 S-adenosylmethionine-dependent methyltransferase HVS_05165 PF02926 THUMP domain HVS_05165 PF01170 Putative RNA methylase family UPF0020 HVS_05170 PF00849 RNA pseudouridylate synthase HVS_05170 PF01479 S4 domain HVS_05180 PF08323 Starch synthase catalytic domain HVS_05180 PF00534 Glycosyl transferases group 1 HVS_05195 PF01238 Phosphomannose isomerase type I HVS_05200 PF00180 Isocitrate/isopropylmalate dehydrogenase HVS_05210 PF00072 Response regulator receiver domain HVS_05210 PF00196 Bacterial regulatory proteins, luxR family HVS_05215 PF00872 Transposase, Mutator family HVS_05235 PF03190 Protein of unknown function, DUF255 HVS_05240 PF02690 Na+/Pi-cotransporter HVS_05245 PF03749 Sugar fermentation stimulation protein RE domain HVS_05245 PF17746 SfsA N-terminal OB domain HVS_05250 PF00188 Cysteine-rich secretory protein family HVS_05260 PF00204 DNA gyrase B HVS_05260 PF00986 DNA gyrase B subunit, carboxyl terminus HVS_05260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVS_05260 PF01751 Toprim domain HVS_05265 PF03989 DNA gyrase C-terminal domain, beta-propeller HVS_05265 PF00521 DNA gyrase/topoisomerase IV, subunit A HVS_05270 PF00180 Isocitrate/isopropylmalate dehydrogenase HVS_05270 PF18324 Hypothetical protein TT1725 HVS_05280 PF01139 tRNA-splicing ligase RtcB HVS_05290 PF17757 UvrB interaction domain HVS_05290 PF12344 Ultra-violet resistance protein B HVS_05290 PF02151 UvrB/uvrC motif HVS_05290 PF04851 Type III restriction enzyme, res subunit HVS_05290 PF00271 Helicase conserved C-terminal domain HVS_05295 PF17755 UvrA DNA-binding domain HVS_05295 PF17760 UvrA interaction domain HVS_05300 PF03590 Aspartate-ammonia ligase HVS_05305 PF00152 tRNA synthetases class II (D, K and N) HVS_05305 PF01336 OB-fold nucleic acid binding domain HVS_05310 PF00005 ABC transporter HVS_05315 PF03649 Uncharacterised protein family (UPF0014) HVS_05335 PF02417 Chromate transporter HVS_05350 PF08281 Sigma-70, region 4 HVS_05350 PF04542 Sigma-70 region 2 HVS_05370 PF01584 CheW-like domain HVS_05375 PF01960 ArgJ family HVS_05380 PF02190 ATP-dependent protease La (LON) substrate-binding domain HVS_05380 PF05362 Lon protease (S16) C-terminal proteolytic domain HVS_05380 PF00004 ATPase family associated with various cellular activities (AAA) HVS_05395 PF05389 Negative regulator of genetic competence (MecA) HVS_05405 PF02545 Maf-like protein HVS_05425 PF00905 Penicillin binding protein transpeptidase domain HVS_05425 PF03717 Penicillin-binding Protein dimerisation domain HVS_05430 PF03775 Septum formation inhibitor MinC, C-terminal domain HVS_05435 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HVS_05440 PF03776 Septum formation topological specificity factor MinE HVS_05445 PF02142 MGS-like domain HVS_05455 PF02163 Peptidase family M50 HVS_05460 PF02219 Methylenetetrahydrofolate reductase HVS_05465 PF01872 RibD C-terminal domain HVS_05465 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HVS_05470 PF00677 Lumazine binding domain HVS_05475 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HVS_05475 PF00925 GTP cyclohydrolase II HVS_05480 PF00885 6,7-dimethyl-8-ribityllumazine synthase HVS_05490 PF00483 Nucleotidyl transferase HVS_05495 PF00483 Nucleotidyl transferase HVS_05515 PF06782 Uncharacterised protein family (UPF0236) HVS_05525 PF04239 Protein of unknown function (DUF421) HVS_05530 PF02254 TrkA-N domain HVS_05530 PF02080 TrkA-C domain HVS_05540 PF02386 Cation transport protein HVS_05550 PF00437 Type II/IV secretion system protein HVS_05590 PF06782 Uncharacterised protein family (UPF0236) HVS_05600 PF00664 ABC transporter transmembrane region HVS_05600 PF00005 ABC transporter HVS_05605 PF00664 ABC transporter transmembrane region HVS_05605 PF00005 ABC transporter HVS_05610 PF00664 ABC transporter transmembrane region HVS_05610 PF00005 ABC transporter HVS_05615 PF01447 Thermolysin metallopeptidase, catalytic domain HVS_05615 PF03413 Peptidase propeptide and YPEB domain HVS_05615 PF07504 Fungalysin/Thermolysin Propeptide Motif HVS_05615 PF02868 Thermolysin metallopeptidase, alpha-helical domain HVS_05635 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain HVS_05635 PF00437 Type II/IV secretion system protein HVS_05675 PF01580 FtsK/SpoIIIE family HVS_05675 PF12538 DNA transporter HVS_05680 PF06013 Proteins of 100 residues with WXG HVS_05690 PF05362 Lon protease (S16) C-terminal proteolytic domain HVS_05690 PF02190 ATP-dependent protease La (LON) substrate-binding domain HVS_05690 PF00004 ATPase family associated with various cellular activities (AAA) HVS_05795 PF00872 Transposase, Mutator family HVS_05830 PF06013 Proteins of 100 residues with WXG HVS_05905 PF00069 Protein kinase domain HVS_05905 PF03793 PASTA domain HVS_05910 PF00269 Small, acid-soluble spore proteins, alpha/beta type HVS_05920 PF07943 Penicillin-binding protein 5, C-terminal domain HVS_05920 PF00768 D-alanyl-D-alanine carboxypeptidase HVS_05945 PF04204 Homoserine O-succinyltransferase HVS_05950 PF00348 Polyprenyl synthetase HVS_05965 PF00873 AcrB/AcrD/AcrF family HVS_05985 PF01594 AI-2E family transporter HVS_06035 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HVS_06060 PF07195 Flagellar hook-associated protein 2 C-terminus HVS_06060 PF02465 Flagellar hook-associated protein 2 N-terminus HVS_06060 PF07196 Flagellin hook IN motif HVS_06065 PF02561 Flagellar protein FliS HVS_06075 PF12146 Serine aminopeptidase, S33 HVS_06080 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) HVS_06085 PF12833 Helix-turn-helix domain HVS_06085 PF02311 AraC-like ligand binding domain HVS_06090 PF00128 Alpha amylase, catalytic domain HVS_06090 PF02903 Alpha amylase, N-terminal ig-like domain HVS_06090 PF00395 S-layer homology domain HVS_06095 PF00395 S-layer homology domain HVS_06095 PF00963 Cohesin domain HVS_06115 PF04542 Sigma-70 region 2 HVS_06120 PF00180 Isocitrate/isopropylmalate dehydrogenase HVS_06125 PF01726 LexA DNA binding domain HVS_06125 PF00717 Peptidase S24-like HVS_06135 PF01227 GTP cyclohydrolase I HVS_06165 PF02578 Multi-copper polyphenol oxidoreductase laccase HVS_06170 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HVS_06175 PF06782 Uncharacterised protein family (UPF0236) HVS_06180 PF01230 HIT domain HVS_06185 PF00395 S-layer homology domain HVS_06185 PF00963 Cohesin domain HVS_06200 PF13614 AAA domain HVS_06205 PF02719 Polysaccharide biosynthesis protein HVS_06215 PF02350 UDP-N-acetylglucosamine 2-epimerase HVS_06220 PF01370 NAD dependent epimerase/dehydratase family HVS_06225 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HVS_06225 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HVS_06225 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HVS_06235 PF00501 AMP-binding enzyme HVS_06275 PF00005 ABC transporter HVS_06275 PF00664 ABC transporter transmembrane region HVS_06290 PF02540 NAD synthase HVS_06290 PF00958 GMP synthase C terminal domain HVS_06290 PF00117 Glutamine amidotransferase class-I HVS_06305 PF00156 Phosphoribosyl transferase domain HVS_06310 PF02769 AIR synthase related protein, C-terminal domain HVS_06310 PF00586 AIR synthase related protein, N-terminal domain HVS_06315 PF00551 Formyl transferase HVS_06320 PF02142 MGS-like domain HVS_06320 PF01808 AICARFT/IMPCHase bienzyme HVS_06325 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HVS_06325 PF02843 Phosphoribosylglycinamide synthetase, C domain HVS_06325 PF02844 Phosphoribosylglycinamide synthetase, N domain HVS_06330 PF00480 ROK family HVS_06335 PF01467 Cytidylyltransferase-like HVS_06340 PF01966 HD domain HVS_06350 PF09334 tRNA synthetases class I (M) HVS_06350 PF13603 Leucyl-tRNA synthetase, Domain 2 HVS_06350 PF08264 Anticodon-binding domain of tRNA HVS_06350 PF00133 tRNA synthetases class I (I, L, M and V) HVS_06355 PF00768 D-alanyl-D-alanine carboxypeptidase HVS_06355 PF07943 Penicillin-binding protein 5, C-terminal domain HVS_06360 PF10531 SLBB domain HVS_06385 PF00395 S-layer homology domain HVS_06395 PF04545 Sigma-70, region 4 HVS_06395 PF04542 Sigma-70 region 2 HVS_06400 PF03717 Penicillin-binding Protein dimerisation domain HVS_06400 PF00905 Penicillin binding protein transpeptidase domain HVS_06405 PF01136 Peptidase family U32 HVS_06405 PF16325 Peptidase family U32 C-terminal domain HVS_06410 PF01596 O-methyltransferase HVS_06415 PF02618 YceG-like family HVS_06420 PF03144 Elongation factor Tu domain 2 HVS_06420 PF00009 Elongation factor Tu GTP binding domain HVS_06420 PF14492 Elongation Factor G, domain II HVS_06420 PF00679 Elongation factor G C-terminus HVS_06425 PF01680 SOR/SNZ family HVS_06430 PF00318 Ribosomal protein S2 HVS_06435 PF00889 Elongation factor TS HVS_06440 PF00696 Amino acid kinase family HVS_06445 PF01765 Ribosome recycling factor HVS_06455 PF01255 Putative undecaprenyl diphosphate synthase HVS_06465 PF13288 DXP reductoisomerase C-terminal domain HVS_06465 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase HVS_06465 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain HVS_06470 PF02163 Peptidase family M50 HVS_06470 PF17820 PDZ domain HVS_06475 PF04551 GcpE protein HVS_06480 PF00535 Glycosyl transferase family 2 HVS_06485 PF00707 Translation initiation factor IF-3, C-terminal domain HVS_06485 PF05198 Translation initiation factor IF-3, N-terminal domain HVS_06490 PF01632 Ribosomal protein L35 HVS_06495 PF00453 Ribosomal protein L20 HVS_06500 PF08032 RNA 2'-O ribose methyltransferase substrate binding HVS_06500 PF00588 SpoU rRNA Methylase family HVS_06505 PF06165 Glycosyltransferase family 36 HVS_06505 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain HVS_06505 PF10091 Putative glucoamylase HVS_06525 PF03588 Leucyl/phenylalanyl-tRNA protein transferase HVS_06530 PF00004 ATPase family associated with various cellular activities (AAA) HVS_06530 PF07724 AAA domain (Cdc48 subfamily) HVS_06530 PF17871 AAA lid domain HVS_06530 PF02861 Clp amino terminal domain, pathogenicity island component HVS_06530 PF10431 C-terminal, D2-small domain, of ClpB protein HVS_06535 PF02617 ATP-dependent Clp protease adaptor protein ClpS HVS_06545 PF07943 Penicillin-binding protein 5, C-terminal domain HVS_06545 PF00768 D-alanyl-D-alanine carboxypeptidase HVS_06550 PF12544 Lysine-2,3-aminomutase HVS_06550 PF04055 Radical SAM superfamily HVS_06555 PF00583 Acetyltransferase (GNAT) family HVS_06560 PF06153 Cyclic-di-AMP receptor HVS_06570 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase HVS_06570 PF01871 AMMECR1 HVS_06580 PF02457 DisA bacterial checkpoint controller nucleotide-binding HVS_06595 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HVS_06595 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HVS_06595 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HVS_06595 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HVS_06600 PF01380 SIS domain HVS_06610 PF17191 RecG wedge domain HVS_06610 PF13749 Putative ATP-dependent DNA helicase recG C-terminal HVS_06610 PF00270 DEAD/DEAH box helicase HVS_06630 PF00872 Transposase, Mutator family HVS_06635 PF06782 Uncharacterised protein family (UPF0236) HVS_06645 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit HVS_06680 PF00271 Helicase conserved C-terminal domain HVS_06680 PF00270 DEAD/DEAH box helicase HVS_06680 PF16124 RecQ zinc-binding HVS_06680 PF00570 HRDC domain HVS_06680 PF09382 RQC domain HVS_06685 PF02384 N-6 DNA Methylase HVS_06700 PF11867 Domain of unknown function (DUF3387) HVS_06700 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) HVS_06700 PF18766 SWI2/SNF2 ATPase HVS_06740 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system HVS_06750 PF13185 GAF domain HVS_06790 PF00144 Beta-lactamase HVS_06885 PF06782 Uncharacterised protein family (UPF0236) HVS_06970 PF01053 Cys/Met metabolism PLP-dependent enzyme HVS_06975 PF01053 Cys/Met metabolism PLP-dependent enzyme HVS_06990 PF01042 Endoribonuclease L-PSP HVS_06995 PF00155 Aminotransferase class I and II HVS_07005 PF01925 Sulfite exporter TauE/SafE HVS_07010 PF01925 Sulfite exporter TauE/SafE HVS_07015 PF13180 PDZ domain HVS_07015 PF17820 PDZ domain HVS_07025 PF00150 Cellulase (glycosyl hydrolase family 5) HVS_07025 PF00404 Dockerin type I domain HVS_07035 PF06961 Protein of unknown function (DUF1294) HVS_07040 PF00924 Mechanosensitive ion channel HVS_07040 PF05552 Conserved TM helix HVS_07045 PF03372 Endonuclease/Exonuclease/phosphatase family HVS_07055 PF00942 Cellulose binding domain HVS_07055 PF00404 Dockerin type I domain HVS_07055 PF00759 Glycosyl hydrolase family 9 HVS_07060 PF00183 Hsp90 protein HVS_07065 PF02769 AIR synthase related protein, C-terminal domain HVS_07065 PF00586 AIR synthase related protein, N-terminal domain HVS_07065 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain HVS_07085 PF02371 Transposase IS116/IS110/IS902 family HVS_07085 PF01548 Transposase HVS_07095 PF00942 Cellulose binding domain HVS_07095 PF00963 Cohesin domain HVS_07095 PF00404 Dockerin type I domain HVS_07105 PF01522 Polysaccharide deacetylase HVS_07115 PF01522 Polysaccharide deacetylase HVS_07145 PF04851 Type III restriction enzyme, res subunit HVS_07145 PF18074 Primosomal protein N C-terminal domain HVS_07145 PF00271 Helicase conserved C-terminal domain HVS_07145 PF18319 PriA DNA helicase Cys-rich region (CRR) domain HVS_07145 PF17764 3′ DNA-binding domain (3′BD) HVS_07150 PF01327 Polypeptide deformylase HVS_07155 PF02911 Formyl transferase, C-terminal domain HVS_07155 PF00551 Formyl transferase HVS_07165 PF04298 Putative neutral zinc metallopeptidase HVS_07170 PF01189 16S rRNA methyltransferase RsmB/F HVS_07170 PF01029 NusB family HVS_07175 PF04055 Radical SAM superfamily HVS_07185 PF00069 Protein kinase domain HVS_07185 PF03793 PASTA domain HVS_07190 PF16745 RsgA N-terminal domain HVS_07190 PF03193 RsgA GTPase HVS_07195 PF00834 Ribulose-phosphate 3 epimerase family HVS_07205 PF00942 Cellulose binding domain HVS_07205 PF02011 Glycosyl hydrolase family 48 HVS_07205 PF00759 Glycosyl hydrolase family 9 HVS_07210 PF00155 Aminotransferase class I and II HVS_07215 PF05670 NFACT protein RNA binding domain HVS_07220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVS_07220 PF08447 PAS fold HVS_07220 PF08448 PAS fold HVS_07225 PF00072 Response regulator receiver domain HVS_07225 PF00158 Sigma-54 interaction domain HVS_07235 PF01957 NfeD-like C-terminal, partner-binding HVS_07235 PF01972 Serine dehydrogenase proteinase HVS_07260 PF01926 50S ribosome-binding GTPase HVS_07265 PF05690 Thiazole biosynthesis protein ThiG HVS_07265 PF02597 ThiS family HVS_07270 PF05690 Thiazole biosynthesis protein ThiG HVS_07275 PF06968 Biotin and Thiamin Synthesis associated domain HVS_07275 PF04055 Radical SAM superfamily HVS_07280 PF00581 Rhodanese-like domain HVS_07280 PF00899 ThiF family HVS_07285 PF02581 Thiamine monophosphate synthase HVS_07290 PF01964 Radical SAM ThiC family HVS_07300 PF00877 NlpC/P60 family HVS_07305 PF00753 Metallo-beta-lactamase superfamily HVS_07305 PF13567 Domain of unknown function (DUF4131) HVS_07305 PF03772 Competence protein HVS_07310 PF06144 DNA polymerase III, delta subunit HVS_07315 PF01649 Ribosomal protein S20 HVS_07320 PF03418 Germination protease HVS_07325 PF06782 Uncharacterised protein family (UPF0236) HVS_07330 PF01520 N-acetylmuramoyl-L-alanine amidase HVS_07330 PF04122 Putative cell wall binding repeat 2 HVS_07340 PF03119 NAD-dependent DNA ligase C4 zinc finger domain HVS_07340 PF03120 NAD-dependent DNA ligase OB-fold domain HVS_07340 PF12826 Helix-hairpin-helix motif HVS_07340 PF01653 NAD-dependent DNA ligase adenylation domain HVS_07340 PF00533 BRCA1 C Terminus (BRCT) domain HVS_07365 PF02686 Glu-tRNAGln amidotransferase C subunit HVS_07370 PF01425 Amidase HVS_07375 PF02637 GatB domain HVS_07375 PF02934 GatB/GatE catalytic domain HVS_07385 PF01515 Phosphate acetyl/butaryl transferase HVS_07390 PF00871 Acetokinase family HVS_07400 PF09397 Ftsk gamma domain HVS_07400 PF01580 FtsK/SpoIIIE family HVS_07400 PF17854 FtsK alpha domain HVS_07405 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HVS_07405 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HVS_07415 PF01966 HD domain HVS_07415 PF00013 KH domain HVS_07415 PF12072 Domain of unknown function (DUF3552) HVS_07420 PF13277 YmdB-like protein HVS_07425 PF04232 Stage V sporulation protein S (SpoVS) HVS_07435 PF02540 NAD synthase HVS_07450 PF16363 GDP-mannose 4,6 dehydratase HVS_07455 PF00534 Glycosyl transferases group 1 HVS_07455 PF13439 Glycosyltransferase Family 4 HVS_07460 PF01636 Phosphotransferase enzyme family HVS_07480 PF00483 Nucleotidyl transferase HVS_07485 PF05949 Bacterial protein of unknown function (DUF881) HVS_07495 PF05949 Bacterial protein of unknown function (DUF881) HVS_07515 PF01522 Polysaccharide deacetylase HVS_07530 PF02562 PhoH-like protein HVS_07535 PF01966 HD domain HVS_07535 PF07697 7TM-HD extracellular HVS_07535 PF07698 7TM receptor with intracellular HD hydrolase HVS_07540 PF02130 Uncharacterized protein family UPF0054 HVS_07545 PF01219 Prokaryotic diacylglycerol kinase HVS_07550 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HVS_07555 PF01926 50S ribosome-binding GTPase HVS_07555 PF07650 KH domain HVS_07565 PF11967 Recombination protein O N terminal HVS_07565 PF02565 Recombination protein O C terminal HVS_07575 PF01695 IstB-like ATP binding protein HVS_07580 PF00665 Integrase core domain HVS_07585 PF00266 Aminotransferase class-V HVS_07590 PF02568 Thiamine biosynthesis protein (ThiI) HVS_07590 PF02926 THUMP domain HVS_07595 PF04294 VanW like protein HVS_07605 PF00464 Serine hydroxymethyltransferase HVS_07615 PF07726 ATPase family associated with various cellular activities (AAA) HVS_07615 PF17863 AAA lid domain HVS_07620 PF13559 Domain of unknown function (DUF4129) HVS_07620 PF01841 Transglutaminase-like superfamily HVS_07620 PF11992 Domain of unknown function (DUF3488) HVS_07625 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HVS_07625 PF00056 lactate/malate dehydrogenase, NAD binding domain HVS_07635 PF02464 Competence-damaged protein HVS_07635 PF00994 Probable molybdopterin binding domain HVS_07635 PF18146 Damage-inducible protein CinA KH domain HVS_07640 PF03023 Lipid II flippase MurJ HVS_07645 PF00154 recA bacterial DNA recombination protein HVS_07650 PF02631 RecX family HVS_07680 PF08245 Mur ligase middle domain HVS_07700 PF05343 M42 glutamyl aminopeptidase HVS_07705 PF05343 M42 glutamyl aminopeptidase HVS_07710 PF05343 M42 glutamyl aminopeptidase HVS_07715 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain HVS_07715 PF00749 tRNA synthetases class I (E and Q), catalytic domain HVS_07725 PF04715 Anthranilate synthase component I, N terminal region HVS_07725 PF00425 chorismate binding enzyme HVS_07730 PF00591 Glycosyl transferase family, a/b domain HVS_07730 PF02885 Glycosyl transferase family, helical bundle domain HVS_07735 PF00218 Indole-3-glycerol phosphate synthase HVS_07740 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase HVS_07745 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase HVS_07750 PF03358 NADPH-dependent FMN reductase HVS_07755 PF00899 ThiF family HVS_07790 PF12437 Glutamine synthetase type III N terminal HVS_07790 PF18318 Glutamine synthetase C-terminal domain HVS_07790 PF00120 Glutamine synthetase, catalytic domain HVS_07800 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase HVS_07800 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg HVS_07800 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II HVS_07805 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HVS_07815 PF02915 Rubrerythrin HVS_07825 PF12127 SigmaW regulon antibacterial HVS_07830 PF01063 Amino-transferase class IV HVS_07840 PF18317 Shikimate 5'-dehydrogenase C-terminal domain HVS_07840 PF01488 Shikimate / quinate 5-dehydrogenase HVS_07840 PF08501 Shikimate dehydrogenase substrate binding domain HVS_07860 PF05922 Peptidase inhibitor I9 HVS_07860 PF00082 Subtilase family HVS_07865 PF01270 Glycosyl hydrolases family 8 HVS_07895 PF10127 RNA repair pathway DNA polymerase beta family HVS_07905 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain HVS_07905 PF04616 Glycosyl hydrolases family 43 HVS_07910 PF00005 ABC transporter HVS_07915 PF09084 NMT1/THI5 like HVS_07920 PF00528 Binding-protein-dependent transport system inner membrane component HVS_07925 PF01910 Thiamine-binding protein HVS_07940 PF01048 Phosphorylase superfamily HVS_07945 PF01258 Prokaryotic dksA/traR C4-type zinc finger HVS_07950 PF00759 Glycosyl hydrolase family 9 HVS_07950 PF02927 Cellulase N-terminal ig-like domain HVS_07950 PF02018 Carbohydrate binding domain HVS_07950 PF07679 Immunoglobulin I-set domain HVS_07955 PF00963 Cohesin domain HVS_07955 PF00395 S-layer homology domain HVS_07960 PF00395 S-layer homology domain HVS_07960 PF00963 Cohesin domain HVS_07965 PF06827 Zinc finger found in FPG and IleRS HVS_07965 PF08264 Anticodon-binding domain of tRNA HVS_07965 PF00133 tRNA synthetases class I (I, L, M and V) HVS_07970 PF01761 3-dehydroquinate synthase HVS_07980 PF04055 Radical SAM superfamily HVS_07980 PF06968 Biotin and Thiamin Synthesis associated domain HVS_07985 PF00266 Aminotransferase class-V HVS_08000 PF02082 Transcriptional regulator HVS_08005 PF00291 Pyridoxal-phosphate dependent enzyme HVS_08010 PF01554 MatE HVS_08030 PF05816 Toxic anion resistance protein (TelA) HVS_08045 PF02342 TerD domain HVS_08050 PF02342 TerD domain HVS_08055 PF00690 Cation transporter/ATPase, N-terminus HVS_08055 PF00689 Cation transporting ATPase, C-terminus HVS_08065 PF11202 Phosphoribosyl transferase (PRTase) HVS_08065 PF15608 PELOTA RNA binding domain HVS_08085 PF12791 Anti-sigma factor N-terminus HVS_08085 PF00331 Glycosyl hydrolase family 10 HVS_08090 PF00731 AIR carboxylase HVS_08095 PF02222 ATP-grasp domain HVS_08095 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain HVS_08100 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HVS_08105 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II HVS_08105 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg HVS_08135 PF01264 Chorismate synthase HVS_08140 PF01202 Shikimate kinase HVS_08145 PF02899 Phage integrase, N-terminal SAM-like domain HVS_08145 PF00589 Phage integrase family HVS_08155 PF02127 Aminopeptidase I zinc metalloprotease (M18) HVS_08160 PF01966 HD domain HVS_08165 PF00072 Response regulator receiver domain HVS_08175 PF00579 tRNA synthetases class I (W and Y) HVS_08185 PF01592 NifU-like N terminal domain HVS_08190 PF00266 Aminotransferase class-V HVS_08200 PF03705 CheR methyltransferase, all-alpha domain HVS_08200 PF01739 CheR methyltransferase, SAM binding domain HVS_08205 PF00334 Nucleoside diphosphate kinase HVS_08210 PF02675 S-adenosylmethionine decarboxylase HVS_08215 PF02401 LytB protein HVS_08215 PF00575 S1 RNA binding domain HVS_08220 PF01553 Acyltransferase HVS_08225 PF02224 Cytidylate kinase HVS_08230 PF07736 Chorismate mutase type I HVS_08250 PF01418 Helix-turn-helix domain, rpiR family HVS_08250 PF01380 SIS domain HVS_08270 PF00942 Cellulose binding domain HVS_08270 PF00759 Glycosyl hydrolase family 9 HVS_08280 PF02436 Conserved carboxylase domain HVS_08280 PF00364 Biotin-requiring enzyme HVS_08280 PF00682 HMGL-like HVS_08285 PF00364 Biotin-requiring enzyme HVS_08290 PF01039 Carboxyl transferase domain HVS_08300 PF06962 Putative rRNA methylase HVS_08305 PF00491 Arginase family HVS_08310 PF17284 Spermidine synthase tetramerisation domain HVS_08355 PF01479 S4 domain HVS_08355 PF00849 RNA pseudouridylate synthase HVS_08360 PF09579 Sporulation protein YtfJ (Spore_YtfJ) HVS_08370 PF04079 Segregation and condensation complex subunit ScpB HVS_08375 PF02616 Segregation and condensation protein ScpA HVS_08380 PF00579 tRNA synthetases class I (W and Y) HVS_08385 PF02163 Peptidase family M50 HVS_08390 PF01743 Poly A polymerase head domain HVS_08390 PF01368 DHH family HVS_08390 PF02272 DHHA1 domain HVS_08390 PF00571 CBS domain HVS_08390 PF12627 Probable RNA and SrmB- binding site of polymerase A HVS_08400 PF00884 Sulfatase HVS_08420 PF00005 ABC transporter HVS_08440 PF01121 Dephospho-CoA kinase HVS_08440 PF04229 GrpB protein HVS_08500 PF05362 Lon protease (S16) C-terminal proteolytic domain HVS_08500 PF02190 ATP-dependent protease La (LON) substrate-binding domain HVS_08500 PF00004 ATPase family associated with various cellular activities (AAA) HVS_08515 PF01661 Macro domain HVS_08520 PF01746 tRNA (Guanine-1)-methyltransferase HVS_08525 PF05239 PRC-barrel domain HVS_08525 PF01782 RimM N-terminal domain HVS_08535 PF00886 Ribosomal protein S16 HVS_08540 PF02978 Signal peptide binding domain HVS_08540 PF02881 SRP54-type protein, helical bundle domain HVS_08540 PF00448 SRP54-type protein, GTPase domain HVS_08545 PF04297 Putative helix-turn-helix protein, YlxM / p13 like HVS_08550 PF02080 TrkA-C domain HVS_08550 PF08443 RimK-like ATP-grasp domain HVS_08550 PF18030 RimK PreATP-grasp domain HVS_08555 PF08443 RimK-like ATP-grasp domain HVS_08560 PF01476 LysM domain HVS_08565 PF01726 LexA DNA binding domain HVS_08565 PF00717 Peptidase S24-like HVS_08570 PF17209 Hfq protein HVS_08580 PF01119 DNA mismatch repair protein, C-terminal domain HVS_08580 PF08676 MutL C terminal dimerisation domain HVS_08585 PF01624 MutS domain I HVS_08585 PF05188 MutS domain II HVS_08585 PF05192 MutS domain III HVS_08585 PF05190 MutS family domain IV HVS_08585 PF00488 MutS domain V HVS_08600 PF04055 Radical SAM superfamily HVS_08600 PF00919 Uncharacterized protein family UPF0004 HVS_08600 PF01938 TRAM domain HVS_08605 PF00156 Phosphoribosyl transferase domain HVS_08620 PF07943 Penicillin-binding protein 5, C-terminal domain HVS_08620 PF00768 D-alanyl-D-alanine carboxypeptidase HVS_08625 PF07943 Penicillin-binding protein 5, C-terminal domain HVS_08625 PF00768 D-alanyl-D-alanine carboxypeptidase HVS_08635 PF01545 Cation efflux family HVS_08635 PF16916 Dimerisation domain of Zinc Transporter HVS_08640 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) HVS_08640 PF12708 Pectate lyase superfamily protein HVS_08640 PF08548 Peptidase M10 serralysin C terminal HVS_08665 PF00005 ABC transporter HVS_08670 PF00392 Bacterial regulatory proteins, gntR family HVS_08680 PF13419 Haloacid dehalogenase-like hydrolase HVS_08710 PF00109 Beta-ketoacyl synthase, N-terminal domain HVS_08710 PF02801 Beta-ketoacyl synthase, C-terminal domain HVS_08715 PF00550 Phosphopantetheine attachment site HVS_08720 PF00155 Aminotransferase class I and II HVS_08725 PF00561 alpha/beta hydrolase fold HVS_08730 PF13847 Methyltransferase domain HVS_08735 PF06968 Biotin and Thiamin Synthesis associated domain HVS_08735 PF04055 Radical SAM superfamily HVS_08745 PF00202 Aminotransferase class-III HVS_08755 PF01728 FtsJ-like methyltransferase HVS_08755 PF01479 S4 domain HVS_08760 PF13292 1-deoxy-D-xylulose-5-phosphate synthase HVS_08760 PF02779 Transketolase, pyrimidine binding domain HVS_08760 PF02780 Transketolase, C-terminal domain HVS_08770 PF02609 Exonuclease VII small subunit HVS_08775 PF02601 Exonuclease VII, large subunit HVS_08775 PF13742 OB-fold nucleic acid binding domain HVS_08780 PF01029 NusB family HVS_08795 PF03780 Asp23 family, cell envelope-related function HVS_08815 PF09546 Stage III sporulation protein AE (spore_III_AE) HVS_08820 PF06686 Stage III sporulation protein AC/AD protein family HVS_08825 PF06686 Stage III sporulation protein AC/AD protein family HVS_08845 PF01132 Elongation factor P (EF-P) OB domain HVS_08845 PF08207 Elongation factor P (EF-P) KOW-like domain HVS_08845 PF09285 Elongation factor P, C-terminal HVS_08850 PF01321 Creatinase/Prolidase N-terminal domain HVS_08850 PF00557 Metallopeptidase family M24 HVS_08855 PF01220 Dehydroquinase class II HVS_08860 PF01261 Xylose isomerase-like TIM barrel HVS_08870 PF06750 Bacterial Peptidase A24 N-terminal domain HVS_08870 PF01478 Type IV leader peptidase family HVS_08880 PF01926 50S ribosome-binding GTPase HVS_08880 PF06071 Protein of unknown function (DUF933) HVS_08885 PF01584 CheW-like domain HVS_08890 PF01098 Cell cycle protein HVS_08895 PF00793 DAHP synthetase I family HVS_08895 PF18152 DAHP synthase ferredoxin-like domain HVS_08900 PF00990 Diguanylate cyclase, GGDEF domain HVS_08900 PF17158 Membrane-associated sensor, integral membrane domain HVS_08920 PF01121 Dephospho-CoA kinase HVS_08925 PF01367 5'-3' exonuclease, C-terminal SAM fold HVS_08925 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HVS_08925 PF00476 DNA polymerase family A HVS_08935 PF04542 Sigma-70 region 2 HVS_08935 PF08281 Sigma-70, region 4 HVS_08940 PF00448 SRP54-type protein, GTPase domain HVS_08940 PF02881 SRP54-type protein, helical bundle domain HVS_08945 PF02463 RecF/RecN/SMC N terminal domain HVS_08945 PF06470 SMC proteins Flexible Hinge Domain HVS_08950 PF04232 Stage V sporulation protein S (SpoVS) HVS_08960 PF00035 Double-stranded RNA binding motif HVS_08960 PF14622 Ribonuclease-III-like HVS_08965 PF00109 Beta-ketoacyl synthase, N-terminal domain HVS_08965 PF02801 Beta-ketoacyl synthase, C-terminal domain HVS_08970 PF00550 Phosphopantetheine attachment site HVS_08980 PF00698 Acyl transferase domain HVS_08985 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HVS_08985 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HVS_08990 PF02504 Fatty acid synthesis protein HVS_09000 PF01066 CDP-alcohol phosphatidyltransferase HVS_09005 PF04055 Radical SAM superfamily HVS_09005 PF18693 TRAM domain HVS_09005 PF00919 Uncharacterized protein family UPF0004 HVS_09025 PF00300 Histidine phosphatase superfamily (branch 1) HVS_09035 PF00331 Glycosyl hydrolase family 10 HVS_09035 PF00756 Putative esterase HVS_09035 PF00404 Dockerin type I domain HVS_09035 PF03422 Carbohydrate binding module (family 6) HVS_09045 PF01180 Dihydroorotate dehydrogenase HVS_09050 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B HVS_09055 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HVS_09060 PF01979 Amidohydrolase family HVS_09065 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HVS_09065 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HVS_09075 PF00156 Phosphoribosyl transferase domain HVS_09090 PF00005 ABC transporter HVS_09110 PF02699 Preprotein translocase subunit HVS_09115 PF01702 Queuine tRNA-ribosyltransferase HVS_09120 PF02547 Queuosine biosynthesis protein HVS_09125 PF04122 Putative cell wall binding repeat 2 HVS_09125 PF08486 Stage II sporulation protein HVS_09130 PF12557 Cob(I)alamin adenosyltransferase N terminal HVS_09130 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP HVS_09135 PF00696 Amino acid kinase family HVS_09135 PF01842 ACT domain HVS_09135 PF13840 ACT domain HVS_09140 PF05173 Dihydrodipicolinate reductase, C-terminus HVS_09140 PF01113 Dihydrodipicolinate reductase, N-terminus HVS_09145 PF00701 Dihydrodipicolinate synthetase family HVS_09150 PF01118 Semialdehyde dehydrogenase, NAD binding domain HVS_09150 PF02774 Semialdehyde dehydrogenase, dimerisation domain HVS_09180 PF12791 Anti-sigma factor N-terminus HVS_09185 PF04542 Sigma-70 region 2 HVS_09200 PF00356 Bacterial regulatory proteins, lacI family HVS_09205 PF00404 Dockerin type I domain HVS_09205 PF00722 Glycosyl hydrolases family 16 HVS_09210 PF04616 Glycosyl hydrolases family 43 HVS_09215 PF04616 Glycosyl hydrolases family 43 HVS_09215 PF03422 Carbohydrate binding module (family 6) HVS_09220 PF00756 Putative esterase HVS_09220 PF00331 Glycosyl hydrolase family 10 HVS_09220 PF03422 Carbohydrate binding module (family 6) HVS_09220 PF00404 Dockerin type I domain HVS_09225 PF13411 MerR HTH family regulatory protein HVS_09225 PF06445 GyrI-like small molecule binding domain HVS_09230 PF00404 Dockerin type I domain HVS_09230 PF13472 GDSL-like Lipase/Acylhydrolase family HVS_09235 PF00457 Glycosyl hydrolases family 11 HVS_09235 PF03422 Carbohydrate binding module (family 6) HVS_09240 PF06964 Alpha-L-arabinofuranosidase C-terminal domain HVS_09250 PF00596 Class II Aldolase and Adducin N-terminal domain HVS_09260 PF03422 Carbohydrate binding module (family 6) HVS_09260 PF00457 Glycosyl hydrolases family 11 HVS_09270 PF01554 MatE HVS_09290 PF17863 AAA lid domain HVS_09290 PF07726 ATPase family associated with various cellular activities (AAA) HVS_09305 PF00005 ABC transporter HVS_09320 PF00392 Bacterial regulatory proteins, gntR family HVS_09320 PF07702 UTRA domain HVS_09325 PF10397 Adenylosuccinate lyase C-terminus HVS_09325 PF00206 Lyase HVS_09330 PF00155 Aminotransferase class I and II HVS_09335 PF01244 Membrane dipeptidase (Peptidase family M19) HVS_09340 PF01695 IstB-like ATP binding protein HVS_09345 PF00665 Integrase core domain HVS_09350 PF01594 AI-2E family transporter HVS_09355 PF04002 RadC-like JAB domain HVS_09360 PF02021 Uncharacterised protein family UPF0102 HVS_09365 PF01312 FlhB HrpN YscU SpaS Family HVS_09375 PF01351 Ribonuclease HII HVS_09380 PF01926 50S ribosome-binding GTPase HVS_09385 PF10502 Signal peptidase, peptidase S26 HVS_09390 PF06782 Uncharacterised protein family (UPF0236) HVS_09395 PF01245 Ribosomal protein L19 HVS_09400 PF00942 Cellulose binding domain HVS_09400 PF00759 Glycosyl hydrolase family 9 HVS_09405 PF01784 NIF3 (NGG1p interacting factor 3) HVS_09435 PF00140 Sigma-70 factor, region 1.2 HVS_09435 PF04539 Sigma-70 region 3 HVS_09435 PF04545 Sigma-70, region 4 HVS_09435 PF03979 Sigma-70 factor, region 1.1 HVS_09435 PF04542 Sigma-70 region 2 HVS_09440 PF10410 DnaB-helicase binding domain of primase HVS_09440 PF08275 DNA primase catalytic core, N-terminal domain HVS_09440 PF01807 CHC2 zinc finger HVS_09445 PF13286 Phosphohydrolase-associated domain HVS_09445 PF01966 HD domain HVS_09450 PF01966 HD domain HVS_09450 PF11871 Domain of unknown function (DUF3391) HVS_09460 PF02261 Aspartate decarboxylase HVS_09465 PF02569 Pantoate-beta-alanine ligase HVS_09470 PF02548 Ketopantoate hydroxymethyltransferase HVS_09475 PF02355 Protein export membrane protein HVS_09475 PF07549 SecD/SecF GG Motif HVS_09480 PF07549 SecD/SecF GG Motif HVS_09480 PF02355 Protein export membrane protein HVS_09485 PF01966 HD domain HVS_09485 PF00013 KH domain HVS_09485 PF12072 Domain of unknown function (DUF3552) HVS_09500 PF00849 RNA pseudouridylate synthase HVS_09500 PF01479 S4 domain HVS_09505 PF01252 Signal peptidase (SPase) II HVS_09510 PF00704 Glycosyl hydrolases family 18 HVS_09510 PF00041 Fibronectin type III domain HVS_09515 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HVS_09520 PF02578 Multi-copper polyphenol oxidoreductase laccase HVS_09525 PF02156 Glycosyl hydrolase family 26 HVS_09530 PF00759 Glycosyl hydrolase family 9 HVS_09530 PF00942 Cellulose binding domain HVS_09555 PF00672 HAMP domain HVS_09555 PF02743 Cache domain HVS_09555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HVS_09570 PF00082 Subtilase family HVS_09575 PF00881 Nitroreductase family HVS_09600 PF17996 Carbohydrate esterase 2 N-terminal HVS_09600 PF00150 Cellulase (glycosyl hydrolase family 5) HVS_09600 PF00657 GDSL-like Lipase/Acylhydrolase HVS_09600 PF00404 Dockerin type I domain HVS_09610 PF13091 PLD-like domain HVS_09620 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HVS_09620 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HVS_09640 PF07726 ATPase family associated with various cellular activities (AAA) HVS_09640 PF17863 AAA lid domain HVS_09660 PF07943 Penicillin-binding protein 5, C-terminal domain HVS_09660 PF00768 D-alanyl-D-alanine carboxypeptidase HVS_09665 PF02885 Glycosyl transferase family, helical bundle domain HVS_09665 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain HVS_09665 PF00591 Glycosyl transferase family, a/b domain HVS_09670 PF01676 Metalloenzyme superfamily HVS_09675 PF02899 Phage integrase, N-terminal SAM-like domain HVS_09675 PF00589 Phage integrase family HVS_09680 PF01944 Stage II sporulation protein M HVS_09685 PF00293 NUDIX domain HVS_09690 PF03807 NADP oxidoreductase coenzyme F420-dependent HVS_09690 PF14748 Pyrroline-5-carboxylate reductase dimerisation HVS_09705 PF05504 Spore germination B3/ GerAC like, C-terminal HVS_09715 PF03323 Bacillus/Clostridium GerA spore germination protein HVS_09730 PF06685 Protein of unknown function (DUF1186) HVS_09740 PF12544 Lysine-2,3-aminomutase HVS_09740 PF04055 Radical SAM superfamily HVS_09745 PF00075 RNase H HVS_09750 PF04055 Radical SAM superfamily HVS_09760 PF02310 B12 binding domain HVS_09760 PF02965 Vitamin B12 dependent methionine synthase, activation domain HVS_09760 PF02607 B12 binding domain HVS_09760 PF02574 Homocysteine S-methyltransferase HVS_09760 PF00809 Pterin binding enzyme HVS_09780 PF05103 DivIVA protein HVS_09790 PF04472 Cell division protein SepF HVS_09795 PF01168 Alanine racemase, N-terminal domain HVS_09805 PF06838 Methionine gamma-lyase HVS_09810 PF00849 RNA pseudouridylate synthase HVS_09820 PF00072 Response regulator receiver domain HVS_09820 PF00486 Transcriptional regulatory protein, C terminal HVS_09825 PF00672 HAMP domain HVS_09825 PF00512 His Kinase A (phospho-acceptor) domain HVS_09825 PF01627 Hpt domain HVS_09825 PF00072 Response regulator receiver domain HVS_09825 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HVS_09825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVS_09830 PF01339 CheB methylesterase HVS_09830 PF00072 Response regulator receiver domain HVS_09835 PF01739 CheR methyltransferase, SAM binding domain HVS_09835 PF03705 CheR methyltransferase, all-alpha domain HVS_09840 PF01584 CheW-like domain HVS_09845 PF01584 CheW-like domain HVS_09845 PF02895 Signal transducing histidine kinase, homodimeric domain HVS_09845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVS_09845 PF01627 Hpt domain HVS_09845 PF07194 P2 response regulator binding domain HVS_09850 PF00072 Response regulator receiver domain HVS_09855 PF00072 Response regulator receiver domain HVS_09855 PF08769 Sporulation initiation factor Spo0A C terminal HVS_09860 PF17820 PDZ domain HVS_09860 PF05580 SpoIVB peptidase S55 HVS_09865 PF00150 Cellulase (glycosyl hydrolase family 5) HVS_09865 PF00404 Dockerin type I domain HVS_09865 PF00657 GDSL-like Lipase/Acylhydrolase HVS_09865 PF17996 Carbohydrate esterase 2 N-terminal HVS_09890 PF02463 RecF/RecN/SMC N terminal domain HVS_09895 PF01316 Arginine repressor, DNA binding domain HVS_09895 PF02863 Arginine repressor, C-terminal domain HVS_09900 PF01513 ATP-NAD kinase HVS_09905 PF12791 Anti-sigma factor N-terminus HVS_09935 PF00457 Glycosyl hydrolases family 11 HVS_09935 PF03422 Carbohydrate binding module (family 6) HVS_09945 PF13181 Tetratricopeptide repeat HVS_09945 PF00535 Glycosyl transferase family 2 HVS_09970 PF02348 Cytidylyltransferase HVS_09980 PF00483 Nucleotidyl transferase HVS_09990 PF03102 NeuB family HVS_09990 PF08666 SAF domain HVS_09995 PF02350 UDP-N-acetylglucosamine 2-epimerase HVS_10000 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HVS_10005 PF16363 GDP-mannose 4,6 dehydratase HVS_10015 PF16193 AAA C-terminal domain HVS_10015 PF00004 ATPase family associated with various cellular activities (AAA) HVS_10015 PF12002 MgsA AAA+ ATPase C terminal HVS_10020 PF00440 Bacterial regulatory proteins, tetR family HVS_10025 PF00005 ABC transporter HVS_10025 PF13732 Domain of unknown function (DUF4162) HVS_10045 PF04542 Sigma-70 region 2 HVS_10045 PF08281 Sigma-70, region 4 HVS_10055 PF00005 ABC transporter HVS_10070 PF00501 AMP-binding enzyme HVS_10070 PF14535 AMP-binding enzyme C-terminal domain HVS_10075 PF00474 Sodium:solute symporter family HVS_10080 PF03030 Inorganic H+ pyrophosphatase HVS_10085 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HVS_10085 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HVS_10085 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HVS_10090 PF00535 Glycosyl transferase family 2 HVS_10090 PF13181 Tetratricopeptide repeat HVS_10105 PF00574 Clp protease HVS_10140 PF07963 Prokaryotic N-terminal methylation motif HVS_10140 PF00114 Pilin (bacterial filament) HVS_10145 PF00482 Type II secretion system (T2SS), protein F HVS_10150 PF00437 Type II/IV secretion system protein HVS_10155 PF00437 Type II/IV secretion system protein HVS_10155 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain HVS_10160 PF02441 Flavoprotein HVS_10170 PF05193 Peptidase M16 inactive domain HVS_10170 PF00675 Insulinase (Peptidase family M16) HVS_10175 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain HVS_10175 PF01138 3' exoribonuclease family, domain 1 HVS_10175 PF03725 3' exoribonuclease family, domain 2 HVS_10175 PF00575 S1 RNA binding domain HVS_10175 PF00013 KH domain HVS_10180 PF00312 Ribosomal protein S15 HVS_10185 PF05167 Uncharacterised ACR (DUF711) HVS_10210 PF00942 Cellulose binding domain HVS_10210 PF12791 Anti-sigma factor N-terminus HVS_10215 PF04542 Sigma-70 region 2 HVS_10220 PF11490 DNA polymerase III polC-type N-terminus II HVS_10220 PF07733 Bacterial DNA polymerase III alpha NTPase domain HVS_10220 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HVS_10220 PF14579 Helix-hairpin-helix motif HVS_10220 PF02811 PHP domain HVS_10220 PF00929 Exonuclease HVS_10225 PF04055 Radical SAM superfamily HVS_10260 PF04542 Sigma-70 region 2 HVS_10260 PF04539 Sigma-70 region 3 HVS_10260 PF04545 Sigma-70, region 4 HVS_10270 PF03975 CheD chemotactic sensory transduction HVS_10275 PF04509 CheC-like family HVS_10280 PF01584 CheW-like domain HVS_10285 PF01627 Hpt domain HVS_10285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVS_10285 PF02895 Signal transducing histidine kinase, homodimeric domain HVS_10285 PF01584 CheW-like domain HVS_10285 PF07194 P2 response regulator binding domain HVS_10290 PF01339 CheB methylesterase HVS_10290 PF00072 Response regulator receiver domain HVS_10300 PF10609 NUBPL iron-transfer P-loop NTPase HVS_10305 PF00448 SRP54-type protein, GTPase domain HVS_10310 PF00771 FHIPEP family HVS_10315 PF01312 FlhB HrpN YscU SpaS Family HVS_10320 PF01311 Bacterial export proteins, family 1 HVS_10325 PF01313 Bacterial export proteins, family 3 HVS_10330 PF00813 FliP family HVS_10340 PF00072 Response regulator receiver domain HVS_10345 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HVS_10345 PF04509 CheC-like family HVS_10350 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HVS_10350 PF02154 Flagellar motor switch protein FliM HVS_10360 PF06289 Flagellar and Swarming motility proteins HVS_10365 PF07559 Flagellar basal body protein FlaE HVS_10365 PF00460 Flagella basal body rod protein HVS_10365 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HVS_10375 PF03963 Flagellar hook capping protein - N-terminal region HVS_10395 PF18269 T3SS EscN ATPase C-terminal domain HVS_10395 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HVS_10395 PF02874 ATP synthase alpha/beta family, beta-barrel domain HVS_10405 PF14842 FliG N-terminal domain HVS_10405 PF14841 FliG middle domain HVS_10405 PF01706 FliG C-terminal domain HVS_10415 PF02049 Flagellar hook-basal body complex protein FliE HVS_10420 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HVS_10420 PF00460 Flagella basal body rod protein HVS_10425 PF00460 Flagella basal body rod protein HVS_10430 PF01134 Glucose inhibited division protein A HVS_10435 PF01751 Toprim domain HVS_10435 PF01396 Topoisomerase DNA binding C4 zinc finger HVS_10435 PF01131 DNA topoisomerase HVS_10440 PF17782 DprA winged helix domain HVS_10440 PF02481 DNA recombination-mediator protein A HVS_10445 PF13335 Magnesium chelatase, subunit ChlI C-terminal HVS_10445 PF01078 Magnesium chelatase, subunit ChlI HVS_10450 PF00942 Cellulose binding domain HVS_10450 PF00404 Dockerin type I domain HVS_10450 PF00963 Cohesin domain HVS_10455 PF03477 ATP cone domain HVS_10460 PF05239 PRC-barrel domain HVS_10465 PF04539 Sigma-70 region 3 HVS_10465 PF04545 Sigma-70, region 4 HVS_10465 PF04542 Sigma-70 region 2 HVS_10470 PF04542 Sigma-70 region 2 HVS_10470 PF04545 Sigma-70, region 4 HVS_10480 PF12327 FtsZ family, C-terminal domain HVS_10480 PF00091 Tubulin/FtsZ family, GTPase domain HVS_10490 PF02491 SHS2 domain inserted in FTSA HVS_10495 PF06947 Protein of unknown function (DUF1290) HVS_10505 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HVS_10510 PF08353 Domain of unknown function (DUF1727) HVS_10510 PF08245 Mur ligase middle domain HVS_10515 PF07685 CobB/CobQ-like glutamine amidotransferase domain HVS_10530 PF00005 ABC transporter HVS_10555 PF17910 FeoB cytosolic helical domain HVS_10555 PF07664 Ferrous iron transport protein B C terminus HVS_10555 PF02421 Ferrous iron transport protein B HVS_10555 PF07670 Nucleoside recognition HVS_10570 PF00005 ABC transporter HVS_10580 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HVS_10585 PF04101 Glycosyltransferase family 28 C-terminal domain HVS_10585 PF03033 Glycosyltransferase family 28 N-terminal domain HVS_10590 PF01098 Cell cycle protein HVS_10595 PF00953 Glycosyl transferase family 4 HVS_10600 PF01225 Mur ligase family, catalytic domain HVS_10600 PF08245 Mur ligase middle domain HVS_10600 PF02875 Mur ligase family, glutamate ligase domain HVS_10605 PF01225 Mur ligase family, catalytic domain HVS_10605 PF02875 Mur ligase family, glutamate ligase domain HVS_10605 PF08245 Mur ligase middle domain HVS_10610 PF03793 PASTA domain HVS_10610 PF03717 Penicillin-binding Protein dimerisation domain HVS_10610 PF00905 Penicillin binding protein transpeptidase domain HVS_10620 PF01795 MraW methylase family HVS_10625 PF02381 MraZ protein, putative antitoxin-like HVS_10635 PF01790 Prolipoprotein diacylglyceryl transferase HVS_10640 PF00675 Insulinase (Peptidase family M16) HVS_10640 PF05193 Peptidase M16 inactive domain HVS_10645 PF05193 Peptidase M16 inactive domain HVS_10660 PF01687 Riboflavin kinase HVS_10660 PF06574 FAD synthetase HVS_10665 PF01509 TruB family pseudouridylate synthase (N terminal domain) HVS_10665 PF16198 tRNA pseudouridylate synthase B C-terminal domain HVS_10670 PF02272 DHHA1 domain HVS_10670 PF01368 DHH family HVS_10675 PF02033 Ribosome-binding factor A HVS_10680 PF00009 Elongation factor Tu GTP binding domain HVS_10680 PF04760 Translation initiation factor IF-2, N-terminal region HVS_10680 PF11987 Translation-initiation factor 2 HVS_10690 PF04296 Protein of unknown function (DUF448) HVS_10695 PF13184 NusA-like KH domain HVS_10695 PF08529 NusA N-terminal domain HVS_10695 PF00575 S1 RNA binding domain HVS_10700 PF17384 RimP C-terminal SH3 domain HVS_10700 PF02576 RimP N-terminal domain HVS_10705 PF02811 PHP domain HVS_10705 PF14579 Helix-hairpin-helix motif HVS_10705 PF07733 Bacterial DNA polymerase III alpha NTPase domain HVS_10705 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HVS_10705 PF11490 DNA polymerase III polC-type N-terminus II HVS_10705 PF01336 OB-fold nucleic acid binding domain HVS_10705 PF00929 Exonuclease HVS_10715 PF03323 Bacillus/Clostridium GerA spore germination protein HVS_10730 PF00963 Cohesin domain HVS_10730 PF00395 S-layer homology domain HVS_10735 PF00186 Dihydrofolate reductase HVS_10740 PF00303 Thymidylate synthase HVS_10745 PF03129 Anticodon binding domain HVS_10745 PF02824 TGS domain HVS_10745 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HVS_10745 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HVS_10765 PF03062 MBOAT, membrane-bound O-acyltransferase family HVS_10770 PF01594 AI-2E family transporter HVS_10775 PF01713 Smr domain HVS_10775 PF00488 MutS domain V HVS_10785 PF01339 CheB methylesterase HVS_10785 PF00072 Response regulator receiver domain HVS_10790 PF16527 Two-component sensor protein CpxA, periplasmic domain HVS_10790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVS_10790 PF00512 His Kinase A (phospho-acceptor) domain HVS_10790 PF00672 HAMP domain HVS_10800 PF09547 Stage IV sporulation protein A (spore_IV_A) HVS_10805 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus HVS_10805 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus HVS_10810 PF02660 Glycerol-3-phosphate acyltransferase HVS_10815 PF01926 50S ribosome-binding GTPase HVS_10815 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HVS_10820 PF01783 Ribosomal L32p protein family HVS_10835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVS_10835 PF00672 HAMP domain HVS_10835 PF00512 His Kinase A (phospho-acceptor) domain HVS_10840 PF00072 Response regulator receiver domain HVS_10840 PF00486 Transcriptional regulatory protein, C terminal HVS_10845 PF05448 Acetyl xylan esterase (AXE1) HVS_10865 PF03061 Thioesterase superfamily HVS_10870 PF00365 Phosphofructokinase HVS_10880 PF02081 Tryptophan RNA-binding attenuator protein HVS_10885 PF14579 Helix-hairpin-helix motif HVS_10885 PF07733 Bacterial DNA polymerase III alpha NTPase domain HVS_10885 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HVS_10885 PF02811 PHP domain HVS_10885 PF01336 OB-fold nucleic acid binding domain HVS_10890 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HVS_10890 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HVS_10890 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HVS_10890 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HVS_10895 PF00072 Response regulator receiver domain HVS_10895 PF00196 Bacterial regulatory proteins, luxR family HVS_10900 PF05384 Sensor protein DegS HVS_10900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVS_10900 PF07730 Histidine kinase HVS_10905 PF07670 Nucleoside recognition HVS_10910 PF01648 4'-phosphopantetheinyl transferase superfamily HVS_10915 PF00704 Glycosyl hydrolases family 18 HVS_10915 PF00041 Fibronectin type III domain HVS_10930 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HVS_10930 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HVS_10935 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg HVS_10935 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HVS_10935 PF10371 Domain of unknown function HVS_10935 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase HVS_10935 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II HVS_10945 PF00005 ABC transporter HVS_10945 PF02687 FtsX-like permease family HVS_10945 PF12704 MacB-like periplasmic core domain HVS_10950 PF00005 ABC transporter HVS_10955 PF00557 Metallopeptidase family M24 HVS_10960 PF00672 HAMP domain HVS_10960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVS_10960 PF00512 His Kinase A (phospho-acceptor) domain HVS_10965 PF00072 Response regulator receiver domain HVS_10965 PF00486 Transcriptional regulatory protein, C terminal HVS_10970 PF13193 AMP-binding enzyme C-terminal domain HVS_10970 PF00501 AMP-binding enzyme HVS_10975 PF00248 Aldo/keto reductase family HVS_11010 PF04304 Protein of unknown function (DUF454) HVS_11025 PF01467 Cytidylyltransferase-like HVS_11035 PF00271 Helicase conserved C-terminal domain HVS_11035 PF17191 RecG wedge domain HVS_11035 PF00270 DEAD/DEAH box helicase HVS_11040 PF00830 Ribosomal L28 family HVS_11045 PF00990 Diguanylate cyclase, GGDEF domain HVS_11050 PF00633 Helix-hairpin-helix motif HVS_11050 PF00730 HhH-GPD superfamily base excision DNA repair protein HVS_11055 PF08323 Starch synthase catalytic domain HVS_11055 PF00534 Glycosyl transferases group 1 HVS_11060 PF01966 HD domain HVS_11065 PF13180 PDZ domain HVS_11065 PF17820 PDZ domain HVS_11070 PF00989 PAS fold HVS_11070 PF18698 Histidine kinase sensor domain HVS_11070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVS_11070 PF00672 HAMP domain HVS_11070 PF00512 His Kinase A (phospho-acceptor) domain HVS_11075 PF00072 Response regulator receiver domain HVS_11075 PF00486 Transcriptional regulatory protein, C terminal HVS_11090 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit HVS_11100 PF01475 Ferric uptake regulator family HVS_11105 PF01676 Metalloenzyme superfamily HVS_11105 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase HVS_11110 PF00872 Transposase, Mutator family HVS_11130 PF02277 Phosphoribosyltransferase HVS_11145 PF05636 HIGH Nucleotidyl Transferase HVS_11150 PF00672 HAMP domain HVS_11150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HVS_11150 PF02743 Cache domain HVS_11155 PF06782 Uncharacterised protein family (UPF0236) HVS_11165 PF17770 Ribonuclease J C-terminal domain HVS_11165 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain HVS_11165 PF00753 Metallo-beta-lactamase superfamily HVS_11170 PF00404 Dockerin type I domain HVS_11170 PF02927 Cellulase N-terminal ig-like domain HVS_11170 PF02018 Carbohydrate binding domain HVS_11170 PF00759 Glycosyl hydrolase family 9 HVS_11175 PF13439 Glycosyltransferase Family 4 HVS_11175 PF00534 Glycosyl transferases group 1 HVS_11180 PF02562 PhoH-like protein HVS_11180 PF13638 PIN domain HVS_11195 PF06452 Carbohydrate family 9 binding domain-like HVS_11195 PF02018 Carbohydrate binding domain HVS_11195 PF00331 Glycosyl hydrolase family 10 HVS_11195 PF00395 S-layer homology domain HVS_11210 PF02896 PEP-utilising enzyme, TIM barrel domain HVS_11210 PF00391 PEP-utilising enzyme, mobile domain HVS_11210 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HVS_11215 PF03129 Anticodon binding domain HVS_11215 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HVS_11220 PF02441 Flavoprotein HVS_11220 PF04127 DNA / pantothenate metabolism flavoprotein HVS_11225 PF01192 RNA polymerase Rpb6 HVS_11230 PF04025 Domain of unknown function (DUF370) HVS_11235 PF03755 YicC-like family, N-terminal region HVS_11235 PF08340 Domain of unknown function (DUF1732) HVS_11240 PF00072 Response regulator receiver domain HVS_11245 PF04452 RNA methyltransferase HVS_11255 PF00226 DnaJ domain HVS_11255 PF01556 DnaJ C terminal domain HVS_11255 PF00684 DnaJ central domain HVS_11260 PF00012 Hsp70 protein HVS_11265 PF01025 GrpE HVS_11270 PF01628 HrcA protein C terminal domain HVS_11275 PF06969 HemN C-terminal domain HVS_11275 PF04055 Radical SAM superfamily HVS_11280 PF06421 GTP-binding protein LepA C-terminus HVS_11280 PF00679 Elongation factor G C-terminus HVS_11280 PF00009 Elongation factor Tu GTP binding domain HVS_11280 PF03144 Elongation factor Tu domain 2 HVS_11300 PF01869 BadF/BadG/BcrA/BcrD ATPase family HVS_11305 PF10502 Signal peptidase, peptidase S26 HVS_11310 PF02938 GAD domain HVS_11310 PF00152 tRNA synthetases class II (D, K and N) HVS_11310 PF01336 OB-fold nucleic acid binding domain HVS_11315 PF03129 Anticodon binding domain HVS_11315 PF13393 Histidyl-tRNA synthetase HVS_11320 PF00753 Metallo-beta-lactamase superfamily HVS_11325 PF02580 D-Tyr-tRNA(Tyr) deacylase HVS_11330 PF04607 Region found in RelA / SpoT proteins HVS_11330 PF13291 ACT domain HVS_11330 PF02824 TGS domain HVS_11345 PF01368 DHH family HVS_11345 PF17768 RecJ OB domain HVS_11345 PF10141 Single-strand DNA-specific exonuclease, C terminal domain HVS_11345 PF02272 DHHA1 domain HVS_11350 PF01165 Ribosomal protein S21 HVS_11355 PF00436 Single-strand binding protein family HVS_11360 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B HVS_11360 PF00175 Oxidoreductase NAD-binding domain HVS_11365 PF13247 4Fe-4S dicluster domain HVS_11365 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HVS_11365 PF07992 Pyridine nucleotide-disulphide oxidoreductase HVS_11375 PF01969 Protein of unknown function DUF111 HVS_11380 PF00731 AIR carboxylase HVS_11395 PF03462 PCRF domain HVS_11395 PF00472 RF-1 domain HVS_11410 PF00155 Aminotransferase class I and II HVS_11415 PF01037 Lrp/AsnC ligand binding domain HVS_11425 PF00085 Thioredoxin HVS_11445 PF08281 Sigma-70, region 4 HVS_11445 PF04542 Sigma-70 region 2 HVS_11450 PF14821 Threonine synthase N terminus HVS_11450 PF00291 Pyridoxal-phosphate dependent enzyme HVS_11460 PF08245 Mur ligase middle domain HVS_11460 PF02875 Mur ligase family, glutamate ligase domain HVS_11465 PF02810 SEC-C motif HVS_11465 PF07517 SecA DEAD-like domain HVS_11465 PF01043 SecA preprotein cross-linking domain HVS_11465 PF07516 SecA Wing and Scaffold domain HVS_11480 PF01371 Trp repressor protein HVS_11485 PF06782 Uncharacterised protein family (UPF0236) HVS_11495 PF01743 Poly A polymerase head domain HVS_11495 PF12627 Probable RNA and SrmB- binding site of polymerase A HVS_11495 PF13735 tRNA nucleotidyltransferase domain 2 putative HVS_11500 PF03764 Elongation factor G, domain IV HVS_11500 PF00679 Elongation factor G C-terminus HVS_11500 PF14492 Elongation Factor G, domain II HVS_11500 PF00009 Elongation factor Tu GTP binding domain HVS_11515 PF00342 Phosphoglucose isomerase HVS_11520 PF00269 Small, acid-soluble spore proteins, alpha/beta type HVS_11525 PF03483 B3/4 domain HVS_11525 PF03484 tRNA synthetase B5 domain HVS_11525 PF03147 Ferredoxin-fold anticodon binding domain HVS_11525 PF01588 Putative tRNA binding domain HVS_11525 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain HVS_11530 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain HVS_11530 PF01409 tRNA synthetases class II core domain (F) HVS_11535 PF00232 Glycosyl hydrolase family 1 HVS_11545 PF01906 Putative heavy-metal-binding HVS_11555 PF10141 Single-strand DNA-specific exonuclease, C terminal domain HVS_11555 PF01368 DHH family HVS_11555 PF17768 RecJ OB domain HVS_11555 PF02272 DHHA1 domain HVS_11565 PF00580 UvrD/REP helicase N-terminal domain HVS_11565 PF13361 UvrD-like helicase C-terminal domain HVS_11595 PF12729 Four helix bundle sensory module for signal transduction HVS_11595 PF00672 HAMP domain HVS_11595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HVS_11615 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region HVS_11615 PF00037 4Fe-4S binding domain HVS_11615 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HVS_11620 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region HVS_11620 PF02256 Iron hydrogenase small subunit HVS_11620 PF02906 Iron only hydrogenase large subunit, C-terminal domain HVS_11620 PF00037 4Fe-4S binding domain HVS_11645 PF01725 Ham1 family HVS_11650 PF01138 3' exoribonuclease family, domain 1 HVS_11650 PF03725 3' exoribonuclease family, domain 2 HVS_11660 PF16363 GDP-mannose 4,6 dehydratase HVS_11665 PF04122 Putative cell wall binding repeat 2 HVS_11665 PF01520 N-acetylmuramoyl-L-alanine amidase HVS_11675 PF17864 RuvB AAA lid domain HVS_11675 PF05491 RuvB C-terminal winged helix domain HVS_11675 PF05496 Holliday junction DNA helicase RuvB P-loop domain HVS_11680 PF07499 RuvA, C-terminal domain HVS_11680 PF01330 RuvA N terminal domain HVS_11685 PF02075 Crossover junction endodeoxyribonuclease RuvC HVS_11705 PF08331 Domain of unknown function (DUF1730) HVS_11715 PF01985 CRS1 / YhbY (CRM) domain HVS_11720 PF09269 Domain of unknown function (DUF1967) HVS_11720 PF01018 GTP1/OBG HVS_11720 PF01926 50S ribosome-binding GTPase HVS_11725 PF01016 Ribosomal L27 protein HVS_11735 PF00829 Ribosomal prokaryotic L21 protein HVS_11765 PF06949 Protein of unknown function (DUF1292) HVS_11770 PF03652 Holliday junction resolvase HVS_11775 PF00248 Aldo/keto reductase family HVS_11780 PF06135 IreB regulatory phosphoprotein HVS_11785 PF04055 Radical SAM superfamily HVS_11785 PF01938 TRAM domain HVS_11785 PF00919 Uncharacterized protein family UPF0004 HVS_11795 PF04463 Protein of unknown function (DUF523) HVS_11800 PF17876 Cold shock domain HVS_11800 PF08206 Ribonuclease B OB domain HVS_11800 PF00773 RNB domain HVS_11800 PF00575 S1 RNA binding domain HVS_11815 PF00113 Enolase, C-terminal TIM barrel domain HVS_11815 PF03952 Enolase, N-terminal domain HVS_11835 PF00437 Type II/IV secretion system protein HVS_11840 PF00437 Type II/IV secretion system protein HVS_11860 PF07726 ATPase family associated with various cellular activities (AAA) HVS_11860 PF17863 AAA lid domain HVS_11920 PF00004 ATPase family associated with various cellular activities (AAA) HVS_11920 PF05362 Lon protease (S16) C-terminal proteolytic domain HVS_11920 PF02190 ATP-dependent protease La (LON) substrate-binding domain HVS_11950 PF00942 Cellulose binding domain HVS_11950 PF12791 Anti-sigma factor N-terminus HVS_11960 PF00395 S-layer homology domain HVS_11960 PF00331 Glycosyl hydrolase family 10 HVS_11960 PF02018 Carbohydrate binding domain HVS_11960 PF06452 Carbohydrate family 9 binding domain-like HVS_11965 PF02638 Glycosyl hydrolase-like 10 HVS_11970 PF02867 Ribonucleotide reductase, barrel domain HVS_11970 PF00317 Ribonucleotide reductase, all-alpha domain HVS_11970 PF03477 ATP cone domain HVS_11980 PF06782 Uncharacterised protein family (UPF0236) HVS_12015 PF03167 Uracil DNA glycosylase superfamily HVS_12020 PF03167 Uracil DNA glycosylase superfamily HVS_12025 PF04055 Radical SAM superfamily HVS_12030 PF01242 6-pyruvoyl tetrahydropterin synthase HVS_12035 PF06508 Queuosine biosynthesis protein QueC HVS_12040 PF01869 BadF/BadG/BcrA/BcrD ATPase family HVS_12050 PF04307 LexA-binding, inner membrane-associated putative hydrolase HVS_12055 PF03816 Cell envelope-related transcriptional attenuator domain HVS_12065 PF00535 Glycosyl transferase family 2 HVS_12100 PF00709 Adenylosuccinate synthetase HVS_12110 PF05681 Fumarate hydratase (Fumerase) HVS_12110 PF05683 Fumarase C-terminus HVS_12115 PF05681 Fumarate hydratase (Fumerase) HVS_12125 PF00216 Bacterial DNA-binding protein HVS_12130 PF08769 Sporulation initiation factor Spo0A C terminal HVS_12130 PF00072 Response regulator receiver domain HVS_12135 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HVS_12140 PF08279 HTH domain HVS_12140 PF00072 Response regulator receiver domain HVS_12145 PF01170 Putative RNA methylase family UPF0020 HVS_12145 PF02926 THUMP domain HVS_12155 PF00528 Binding-protein-dependent transport system inner membrane component HVS_12160 PF00005 ABC transporter HVS_12170 PF06415 BPG-independent PGAM N-terminus (iPGM_N) HVS_12170 PF01676 Metalloenzyme superfamily HVS_12175 PF00121 Triosephosphate isomerase HVS_12180 PF00162 Phosphoglycerate kinase HVS_12185 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HVS_12185 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HVS_12200 PF16197 Ketoacyl-synthetase C-terminal extension HVS_12200 PF00109 Beta-ketoacyl synthase, N-terminal domain HVS_12200 PF00698 Acyl transferase domain HVS_12200 PF02801 Beta-ketoacyl synthase, C-terminal domain HVS_12200 PF00550 Phosphopantetheine attachment site HVS_12200 PF00668 Condensation domain HVS_12210 PF13193 AMP-binding enzyme C-terminal domain HVS_12210 PF00501 AMP-binding enzyme HVS_12215 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HVS_12215 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HVS_12220 PF00550 Phosphopantetheine attachment site HVS_12225 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HVS_12225 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HVS_12230 PF01966 HD domain HVS_12230 PF00072 Response regulator receiver domain HVS_12240 PF07687 Peptidase dimerisation domain HVS_12240 PF01546 Peptidase family M20/M25/M40 HVS_12245 PF00588 SpoU rRNA Methylase family HVS_12260 PF04539 Sigma-70 region 3 HVS_12260 PF04542 Sigma-70 region 2 HVS_12260 PF04545 Sigma-70, region 4 HVS_12265 PF13581 Histidine kinase-like ATPase domain HVS_12270 PF01740 STAS domain HVS_12280 PF00381 PTS HPr component phosphorylation site HVS_12285 PF02650 WhiA C-terminal HTH domain HVS_12285 PF14527 WhiA LAGLIDADG-like domain HVS_12285 PF10298 WhiA N-terminal LAGLIDADG-like domain HVS_12295 PF03668 P-loop ATPase protein family HVS_12300 PF01565 FAD binding domain HVS_12300 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HVS_12305 PF02811 PHP domain HVS_12310 PF07475 HPr Serine kinase C-terminal domain HVS_12310 PF02603 HPr Serine kinase N terminus HVS_12325 PF00072 Response regulator receiver domain HVS_12325 PF12833 Helix-turn-helix domain HVS_12345 PF00849 RNA pseudouridylate synthase HVS_12345 PF01479 S4 domain HVS_12350 PF01189 16S rRNA methyltransferase RsmB/F HVS_12350 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF HVS_12350 PF17126 RsmF rRNA methyltransferase first C-terminal domain HVS_12355 PF00330 Aconitase family (aconitate hydratase) HVS_12360 PF00682 HMGL-like HVS_12365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HVS_12365 PF00672 HAMP domain HVS_12365 PF02743 Cache domain HVS_12370 PF00300 Histidine phosphatase superfamily (branch 1) HVS_12375 PF02654 Cobalamin-5-phosphate synthase HVS_12380 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase HVS_12385 PF03186 CobD/Cbib protein HVS_12390 PF00696 Amino acid kinase family HVS_12390 PF13840 ACT domain HVS_12395 PF01842 ACT domain HVS_12395 PF00742 Homoserine dehydrogenase HVS_12395 PF03447 Homoserine dehydrogenase, NAD binding domain HVS_12410 PF06782 Uncharacterised protein family (UPF0236) HVS_12415 PF14310 Fibronectin type III-like domain HVS_12415 PF00933 Glycosyl hydrolase family 3 N terminal domain HVS_12415 PF01915 Glycosyl hydrolase family 3 C-terminal domain HVS_12420 PF00150 Cellulase (glycosyl hydrolase family 5) HVS_12425 PF01979 Amidohydrolase family HVS_12430 PF08241 Methyltransferase domain HVS_12435 PF00005 ABC transporter HVS_12445 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain HVS_12445 PF05221 S-adenosyl-L-homocysteine hydrolase HVS_12450 PF01048 Phosphorylase superfamily HVS_12480 PF00005 ABC transporter HVS_12480 PF13732 Domain of unknown function (DUF4162) HVS_12495 PF00291 Pyridoxal-phosphate dependent enzyme HVS_12515 PF11897 Protein of unknown function (DUF3417) HVS_12515 PF00343 Carbohydrate phosphorylase HVS_12520 PF00528 Binding-protein-dependent transport system inner membrane component HVS_12525 PF00528 Binding-protein-dependent transport system inner membrane component HVS_12535 PF01869 BadF/BadG/BcrA/BcrD ATPase family HVS_12550 PF00639 PPIC-type PPIASE domain HVS_12550 PF09312 SurA N-terminal domain HVS_12555 PF01116 Fructose-bisphosphate aldolase class-II HVS_12560 PF00365 Phosphofructokinase HVS_12565 PF02901 Pyruvate formate lyase-like HVS_12565 PF01228 Glycine radical HVS_12575 PF02256 Iron hydrogenase small subunit HVS_12575 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region HVS_12575 PF02906 Iron only hydrogenase large subunit, C-terminal domain HVS_12575 PF00037 4Fe-4S binding domain HVS_12580 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HVS_12580 PF00037 4Fe-4S binding domain HVS_12580 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region HVS_12590 PF13188 PAS domain HVS_12590 PF13426 PAS domain HVS_12590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVS_12590 PF00512 His Kinase A (phospho-acceptor) domain HVS_12590 PF00989 PAS fold HVS_12615 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HVS_12615 PF01411 tRNA synthetases class II (A) HVS_12615 PF02272 DHHA1 domain HVS_12620 PF01259 SAICAR synthetase HVS_12625 PF02535 ZIP Zinc transporter HVS_12630 PF01270 Glycosyl hydrolases family 8 HVS_12630 PF00404 Dockerin type I domain HVS_12635 PF00942 Cellulose binding domain HVS_12635 PF00759 Glycosyl hydrolase family 9 HVS_12645 PF07883 Cupin domain HVS_12670 PF00457 Glycosyl hydrolases family 11 HVS_12670 PF03422 Carbohydrate binding module (family 6) HVS_12685 PF01926 50S ribosome-binding GTPase HVS_12685 PF12631 MnmE helical domain HVS_12685 PF10396 GTP-binding protein TrmE N-terminus HVS_12690 PF06782 Uncharacterised protein family (UPF0236) HVS_12705 PF01695 IstB-like ATP binding protein HVS_12710 PF00665 Integrase core domain HVS_12715 PF00665 Integrase core domain HVS_12715 PF08281 Sigma-70, region 4 HVS_12735 PF00005 ABC transporter HVS_12735 PF12848 ABC transporter HVS_12745 PF07556 Protein of unknown function (DUF1538) HVS_12750 PF00664 ABC transporter transmembrane region HVS_12750 PF00005 ABC transporter HVS_12755 PF00005 ABC transporter HVS_12755 PF00664 ABC transporter transmembrane region HVS_12770 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HVS_12770 PF07992 Pyridine nucleotide-disulphide oxidoreductase HVS_12785 PF01171 PP-loop family HVS_12795 PF02457 DisA bacterial checkpoint controller nucleotide-binding HVS_12795 PF10635 DisA bacterial checkpoint controller linker region HVS_12800 PF18073 Rubredoxin metal binding domain HVS_12815 PF00149 Calcineurin-like phosphoesterase HVS_12830 PF00004 ATPase family associated with various cellular activities (AAA) HVS_12830 PF07724 AAA domain (Cdc48 subfamily) HVS_12830 PF17871 AAA lid domain HVS_12830 PF02861 Clp amino terminal domain, pathogenicity island component HVS_12830 PF10431 C-terminal, D2-small domain, of ClpB protein HVS_12835 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain HVS_12840 PF17757 UvrB interaction domain HVS_12840 PF12344 Ultra-violet resistance protein B HVS_12840 PF02151 UvrB/uvrC motif HVS_12840 PF04851 Type III restriction enzyme, res subunit HVS_12840 PF00271 Helicase conserved C-terminal domain HVS_12845 PF05848 CtsR N-terminal HTH domain HVS_12845 PF17727 CtsR C-terminal dimerization domain HVS_12860 PF00679 Elongation factor G C-terminus HVS_12860 PF14492 Elongation Factor G, domain II HVS_12860 PF03764 Elongation factor G, domain IV HVS_12860 PF00009 Elongation factor Tu GTP binding domain HVS_12860 PF03144 Elongation factor Tu domain 2 HVS_12865 PF00793 DAHP synthetase I family HVS_12865 PF18152 DAHP synthase ferredoxin-like domain HVS_12870 PF01842 ACT domain HVS_12870 PF02153 Prephenate dehydrogenase HVS_12875 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HVS_12880 PF02629 CoA binding domain HVS_12880 PF06971 Putative DNA-binding protein N-terminus HVS_12885 PF00005 ABC transporter HVS_12885 PF16326 ABC transporter C-terminal domain HVS_12885 PF12848 ABC transporter HVS_12890 PF01520 N-acetylmuramoyl-L-alanine amidase HVS_12900 PF02245 Methylpurine-DNA glycosylase (MPG) HVS_12915 PF01894 Uncharacterised protein family UPF0047 HVS_12930 PF00106 short chain dehydrogenase HVS_12935 PF13145 PPIC-type PPIASE domain HVS_12950 PF17863 AAA lid domain HVS_12950 PF07726 ATPase family associated with various cellular activities (AAA) HVS_12965 PF13732 Domain of unknown function (DUF4162) HVS_12965 PF00005 ABC transporter HVS_12980 PF00672 HAMP domain HVS_12980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HVS_12980 PF02203 Tar ligand binding domain homologue HVS_12990 PF00722 Glycosyl hydrolases family 16 HVS_12990 PF00404 Dockerin type I domain HVS_13000 PF00963 Cohesin domain HVS_13000 PF00395 S-layer homology domain HVS_13010 PF01668 SmpB protein HVS_13015 PF00722 Glycosyl hydrolases family 16 HVS_13015 PF00404 Dockerin type I domain HVS_13020 PF02927 Cellulase N-terminal ig-like domain HVS_13020 PF00759 Glycosyl hydrolase family 9 HVS_13020 PF00404 Dockerin type I domain HVS_13025 PF00404 Dockerin type I domain HVS_13025 PF00150 Cellulase (glycosyl hydrolase family 5) HVS_13025 PF00657 GDSL-like Lipase/Acylhydrolase HVS_13025 PF17996 Carbohydrate esterase 2 N-terminal HVS_13030 PF06452 Carbohydrate family 9 binding domain-like HVS_13030 PF02018 Carbohydrate binding domain HVS_13030 PF00331 Glycosyl hydrolase family 10 HVS_13030 PF00395 S-layer homology domain HVS_13035 PF03422 Carbohydrate binding module (family 6) HVS_13035 PF00457 Glycosyl hydrolases family 11 HVS_13045 PF02811 PHP domain HVS_13055 PF01464 Transglycosylase SLT domain HVS_13060 PF00814 Glycoprotease family HVS_13065 PF02673 Bacitracin resistance protein BacA HVS_13070 PF00004 ATPase family associated with various cellular activities (AAA) HVS_13070 PF05362 Lon protease (S16) C-terminal proteolytic domain HVS_13095 PF07724 AAA domain (Cdc48 subfamily) HVS_13095 PF10431 C-terminal, D2-small domain, of ClpB protein HVS_13095 PF06689 ClpX C4-type zinc finger HVS_13100 PF00574 Clp protease HVS_13105 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HVS_13105 PF05698 Bacterial trigger factor protein (TF) C-terminus HVS_13105 PF05697 Bacterial trigger factor protein (TF) HVS_13115 PF01541 GIY-YIG catalytic domain HVS_13115 PF02151 UvrB/uvrC motif HVS_13115 PF08459 UvrC Helix-hairpin-helix N-terminal HVS_13135 PF00381 PTS HPr component phosphorylation site HVS_13140 PF13490 Putative zinc-finger HVS_13145 PF08281 Sigma-70, region 4 HVS_13145 PF04542 Sigma-70 region 2 HVS_13150 PF03144 Elongation factor Tu domain 2 HVS_13150 PF03143 Elongation factor Tu C-terminal domain HVS_13150 PF00009 Elongation factor Tu GTP binding domain HVS_13155 PF00009 Elongation factor Tu GTP binding domain HVS_13155 PF03144 Elongation factor Tu domain 2 HVS_13155 PF03764 Elongation factor G, domain IV HVS_13155 PF14492 Elongation Factor G, domain II HVS_13155 PF00679 Elongation factor G C-terminus HVS_13160 PF00177 Ribosomal protein S7p/S5e HVS_13165 PF00164 Ribosomal protein S12/S23 HVS_13170 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family HVS_13175 PF05000 RNA polymerase Rpb1, domain 4 HVS_13175 PF04998 RNA polymerase Rpb1, domain 5 HVS_13175 PF00623 RNA polymerase Rpb1, domain 2 HVS_13175 PF04997 RNA polymerase Rpb1, domain 1 HVS_13175 PF04983 RNA polymerase Rpb1, domain 3 HVS_13180 PF04565 RNA polymerase Rpb2, domain 3 HVS_13180 PF04560 RNA polymerase Rpb2, domain 7 HVS_13180 PF04563 RNA polymerase beta subunit HVS_13180 PF04561 RNA polymerase Rpb2, domain 2 HVS_13180 PF10385 RNA polymerase beta subunit external 1 domain HVS_13180 PF00562 RNA polymerase Rpb2, domain 6 HVS_13185 PF16320 Ribosomal protein L7/L12 dimerisation domain HVS_13185 PF00542 Ribosomal protein L7/L12 C-terminal domain HVS_13190 PF00466 Ribosomal protein L10 HVS_13195 PF00687 Ribosomal protein L1p/L10e family HVS_13200 PF03946 Ribosomal protein L11, N-terminal domain HVS_13200 PF00298 Ribosomal protein L11, RNA binding domain HVS_13205 PF02357 Transcription termination factor nusG HVS_13205 PF00467 KOW motif HVS_13210 PF00584 SecE/Sec61-gamma subunits of protein translocation complex HVS_13215 PF00471 Ribosomal protein L33 HVS_13220 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HVS_13220 PF00205 Thiamine pyrophosphate enzyme, central domain HVS_13220 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HVS_13225 PF00920 Dehydratase family HVS_13240 PF06782 Uncharacterised protein family (UPF0236) HVS_13265 PF00005 ABC transporter HVS_13270 PF00595 PDZ domain HVS_13270 PF03572 Peptidase family S41 HVS_13280 PF07992 Pyridine nucleotide-disulphide oxidoreductase HVS_13280 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HVS_13285 PF01381 Helix-turn-helix HVS_13290 PF01694 Rhomboid family HVS_13295 PF00690 Cation transporter/ATPase, N-terminus HVS_13295 PF00689 Cation transporting ATPase, C-terminus HVS_13300 PF00512 His Kinase A (phospho-acceptor) domain HVS_13300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVS_13300 PF00672 HAMP domain HVS_13305 PF00072 Response regulator receiver domain HVS_13305 PF00486 Transcriptional regulatory protein, C terminal HVS_13320 PF02203 Tar ligand binding domain homologue HVS_13320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HVS_13320 PF00672 HAMP domain HVS_13325 PF03422 Carbohydrate binding module (family 6) HVS_13325 PF00457 Glycosyl hydrolases family 11 HVS_13345 PF00004 ATPase family associated with various cellular activities (AAA) HVS_13345 PF02190 ATP-dependent protease La (LON) substrate-binding domain HVS_13345 PF05362 Lon protease (S16) C-terminal proteolytic domain HVS_13430 PF00574 Clp protease HVS_13435 PF04860 Phage portal protein HVS_13440 PF03354 Phage Terminase HVS_13465 PF01555 DNA methylase HVS_13470 PF01555 DNA methylase HVS_13535 PF01695 IstB-like ATP binding protein HVS_13540 PF00665 Integrase core domain HVS_13595 PF02796 Helix-turn-helix domain of resolvase HVS_13595 PF00665 Integrase core domain HVS_13605 PF16363 GDP-mannose 4,6 dehydratase HVS_13635 PF00534 Glycosyl transferases group 1 HVS_13635 PF13439 Glycosyltransferase Family 4 HVS_13640 PF00534 Glycosyl transferases group 1 HVS_13650 PF01370 NAD dependent epimerase/dehydratase family HVS_13655 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HVS_13655 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HVS_13655 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HVS_13670 PF02397 Bacterial sugar transferase HVS_13695 PF09382 RQC domain HVS_13695 PF00271 Helicase conserved C-terminal domain HVS_13695 PF00570 HRDC domain HVS_13695 PF16124 RecQ zinc-binding HVS_13695 PF00270 DEAD/DEAH box helicase HVS_13715 PF13408 Recombinase zinc beta ribbon domain HVS_13715 PF07508 Recombinase HVS_13725 PF02796 Helix-turn-helix domain of resolvase HVS_13725 PF00239 Resolvase, N terminal domain HVS_13735 PF01510 N-acetylmuramoyl-L-alanine amidase HVS_13735 PF01476 LysM domain HVS_13735 PF01471 Putative peptidoglycan binding domain HVS_13740 PF05105 Bacteriophage holin family HVS_13755 PF00398 Ribosomal RNA adenine dimethylase HVS_13815 PF06782 Uncharacterised protein family (UPF0236) HVS_13840 PF00665 Integrase core domain HVS_13840 PF02796 Helix-turn-helix domain of resolvase HVS_13845 PF01695 IstB-like ATP binding protein HVS_13850 PF18211 Csm1 subunit domain B HVS_13860 PF03787 RAMP superfamily HVS_13890 PF06445 GyrI-like small molecule binding domain HVS_13890 PF12833 Helix-turn-helix domain HVS_13925 PF02796 Helix-turn-helix domain of resolvase HVS_13925 PF00665 Integrase core domain HVS_13930 PF00963 Cohesin domain HVS_13930 PF00395 S-layer homology domain HVS_13935 PF00872 Transposase, Mutator family HVS_13945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HVS_13945 PF03466 LysR substrate binding domain HVS_13950 PF02219 Methylenetetrahydrofolate reductase HVS_13955 PF01717 Cobalamin-independent synthase, Catalytic domain HVS_13955 PF08267 Cobalamin-independent synthase, N-terminal domain HVS_13965 PF11638 DnaA N-terminal domain HVS_13965 PF08299 Bacterial dnaA protein helix-turn-helix HVS_13965 PF00308 Bacterial dnaA protein HVS_13970 PF00665 Integrase core domain HVS_13975 PF18273 Type III R-M EcoP15I C-terminal domain HVS_13975 PF01555 DNA methylase HVS_13990 PF13186 Iron-sulfur cluster-binding domain HVS_13990 PF04055 Radical SAM superfamily HVS_14005 PF05958 tRNA (Uracil-5-)-methyltransferase HVS_14005 PF01938 TRAM domain HVS_14010 PF00759 Glycosyl hydrolase family 9 HVS_14010 PF00942 Cellulose binding domain HVS_14015 PF00404 Dockerin type I domain HVS_14020 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HVS_14020 PF07992 Pyridine nucleotide-disulphide oxidoreductase HVS_14075 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HVS_14075 PF07992 Pyridine nucleotide-disulphide oxidoreductase HVS_14085 PF05504 Spore germination B3/ GerAC like, C-terminal HVS_14090 PF03323 Bacillus/Clostridium GerA spore germination protein HVS_14100 PF00403 Heavy-metal-associated domain HVS_14110 PF05552 Conserved TM helix HVS_14120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HVS_14120 PF00672 HAMP domain HVS_14120 PF02743 Cache domain HVS_14125 PF00171 Aldehyde dehydrogenase family HVS_14125 PF00465 Iron-containing alcohol dehydrogenase HVS_14150 PF00990 Diguanylate cyclase, GGDEF domain HVS_14150 PF00563 EAL domain HVS_14150 PF03707 Bacterial signalling protein N terminal repeat HVS_14155 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HVS_14155 PF00005 ABC transporter HVS_14160 PF00528 Binding-protein-dependent transport system inner membrane component HVS_14160 PF12911 N-terminal TM domain of oligopeptide transport permease C HVS_14165 PF00528 Binding-protein-dependent transport system inner membrane component HVS_14170 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HVS_14175 PF05958 tRNA (Uracil-5-)-methyltransferase HVS_14180 PF00293 NUDIX domain HVS_14180 PF13344 Haloacid dehalogenase-like hydrolase HVS_14185 PF17996 Carbohydrate esterase 2 N-terminal HVS_14185 PF00657 GDSL-like Lipase/Acylhydrolase HVS_14185 PF00404 Dockerin type I domain HVS_14185 PF00150 Cellulase (glycosyl hydrolase family 5) HVS_14195 PF00011 Hsp20/alpha crystallin family HVS_14200 PF01943 Polysaccharide biosynthesis protein HVS_14200 PF14667 Polysaccharide biosynthesis C-terminal domain HVS_14210 PF13439 Glycosyltransferase Family 4 HVS_14210 PF00534 Glycosyl transferases group 1 HVS_14215 PF03808 Glycosyl transferase WecB/TagA/CpsF family HVS_14225 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system HVS_14230 PF01402 Ribbon-helix-helix protein, copG family HVS_14240 PF00842 Alanine racemase, C-terminal domain HVS_14240 PF01168 Alanine racemase, N-terminal domain HVS_14245 PF01256 Carbohydrate kinase HVS_14245 PF03853 YjeF-related protein N-terminus HVS_14265 PF13579 Glycosyl transferase 4-like domain HVS_14265 PF00534 Glycosyl transferases group 1 HVS_14270 PF00132 Bacterial transferase hexapeptide (six repeats) HVS_14275 PF01040 UbiA prenyltransferase family HVS_14280 PF00155 Aminotransferase class I and II HVS_14290 PF01965 DJ-1/PfpI family HVS_14300 PF00150 Cellulase (glycosyl hydrolase family 5) HVS_14300 PF03424 Carbohydrate binding domain (family 17/28) HVS_14300 PF00395 S-layer homology domain HVS_14315 PF17863 AAA lid domain HVS_14315 PF07726 ATPase family associated with various cellular activities (AAA) HVS_14320 PF01882 Protein of unknown function DUF58 HVS_14330 PF13519 von Willebrand factor type A domain HVS_14330 PF07584 Aerotolerance regulator N-terminal HVS_14350 PF04308 Ribonuclease H-like HVS_14365 PF02001 Protein of unknown function DUF134 HVS_14370 PF01381 Helix-turn-helix HVS_14380 PF05067 Manganese containing catalase HVS_14420 PF03063 Prismane/CO dehydrogenase family HVS_14430 PF01276 Orn/Lys/Arg decarboxylase, major domain HVS_14430 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain HVS_14435 PF02308 MgtC family HVS_14440 PF09551 Stage II sporulation protein R (spore_II_R) HVS_14445 PF06418 CTP synthase N-terminus HVS_14445 PF00117 Glutamine amidotransferase class-I HVS_14450 PF06782 Uncharacterised protein family (UPF0236) HVS_14455 PF00188 Cysteine-rich secretory protein family HVS_14460 PF03129 Anticodon binding domain HVS_14460 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HVS_14460 PF04073 Aminoacyl-tRNA editing domain HVS_14475 PF01791 DeoC/LacD family aldolase HVS_14480 PF01022 Bacterial regulatory protein, arsR family HVS_14490 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HVS_14495 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HVS_14505 PF00072 Response regulator receiver domain HVS_14505 PF00486 Transcriptional regulatory protein, C terminal HVS_14535 PF01430 Hsp33 protein HVS_14540 PF00313 'Cold-shock' DNA-binding domain HVS_14545 PF05175 Methyltransferase small domain HVS_14545 PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus HVS_14550 PF04740 LXG domain of WXG superfamily HVS_14560 PF01471 Putative peptidoglycan binding domain HVS_14560 PF03572 Peptidase family S41 HVS_14560 PF13180 PDZ domain HVS_14565 PF01551 Peptidase family M23 HVS_14565 PF04225 Opacity-associated protein A LysM-like domain HVS_14570 PF18075 FtsX extracellular domain HVS_14570 PF02687 FtsX-like permease family HVS_14575 PF00005 ABC transporter HVS_14580 PF17853 GGDEF-like domain HVS_14580 PF07905 Purine catabolism regulatory protein-like family HVS_14580 PF13556 PucR C-terminal helix-turn-helix domain HVS_14585 PF03459 TOBE domain HVS_14585 PF17912 MalK OB fold domain HVS_14585 PF00005 ABC transporter HVS_14590 PF01118 Semialdehyde dehydrogenase, NAD binding domain HVS_14590 PF02774 Semialdehyde dehydrogenase, dimerisation domain HVS_14595 PF00696 Amino acid kinase family HVS_14605 PF00202 Aminotransferase class-III HVS_14610 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HVS_14610 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HVS_14620 PF07730 Histidine kinase HVS_14625 PF00196 Bacterial regulatory proteins, luxR family HVS_14625 PF00072 Response regulator receiver domain HVS_14650 PF13276 HTH-like domain HVS_14650 PF00665 Integrase core domain HVS_14650 PF13333 Integrase core domain HVS_14685 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain HVS_14685 PF06165 Glycosyltransferase family 36 HVS_14695 PF13292 1-deoxy-D-xylulose-5-phosphate synthase HVS_14695 PF02779 Transketolase, pyrimidine binding domain HVS_14695 PF02780 Transketolase, C-terminal domain HVS_14700 PF00456 Transketolase, thiamine diphosphate binding domain HVS_14705 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) HVS_14705 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 HVS_14725 PF00990 Diguanylate cyclase, GGDEF domain HVS_14725 PF00072 Response regulator receiver domain HVS_14730 PF12791 Anti-sigma factor N-terminus HVS_14730 PF00942 Cellulose binding domain HVS_14735 PF03061 Thioesterase superfamily HVS_14745 PF01207 Dihydrouridine synthase (Dus) HVS_14750 PF10502 Signal peptidase, peptidase S26 HVS_14770 PF16360 GTP-binding GTPase Middle Region HVS_14770 PF13167 GTP-binding GTPase N-terminal HVS_14770 PF01926 50S ribosome-binding GTPase HVS_14775 PF00155 Aminotransferase class I and II HVS_14780 PF08240 Alcohol dehydrogenase GroES-like domain HVS_14780 PF00107 Zinc-binding dehydrogenase HVS_14785 PF00692 dUTPase HVS_14790 PF01136 Peptidase family U32 HVS_14790 PF12392 Collagenase HVS_14800 PF00404 Dockerin type I domain HVS_14800 PF02011 Glycosyl hydrolase family 48 HVS_14815 PF00398 Ribosomal RNA adenine dimethylase HVS_14820 PF06725 3D domain HVS_14820 PF03990 G5-linked-Ubiquitin-like domain HVS_14820 PF07501 G5 domain HVS_14830 PF01026 TatD related DNase HVS_14835 PF08264 Anticodon-binding domain of tRNA HVS_14835 PF09334 tRNA synthetases class I (M) HVS_14835 PF01588 Putative tRNA binding domain HVS_14840 PF07670 Nucleoside recognition HVS_14845 PF07670 Nucleoside recognition HVS_14850 PF18277 AbrB C-terminal domain HVS_14850 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin HVS_14855 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HVS_14860 PF05175 Methyltransferase small domain HVS_14865 PF00037 4Fe-4S binding domain HVS_14870 PF04468 PSP1 C-terminal conserved region HVS_14875 PF12169 DNA polymerase III subunits gamma and tau domain III HVS_14875 PF12170 DNA polymerase III tau subunit V interacting with alpha HVS_14890 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain HVS_14890 PF01276 Orn/Lys/Arg decarboxylase, major domain HVS_14900 PF03949 Malic enzyme, NAD binding domain HVS_14900 PF00390 Malic enzyme, N-terminal domain HVS_14905 PF03309 Type III pantothenate kinase HVS_14915 PF02237 Biotin protein ligase C terminal domain HVS_14915 PF08279 HTH domain HVS_14915 PF03099 Biotin/lipoate A/B protein ligase family HVS_14925 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HVS_14930 PF02152 Dihydroneopterin aldolase HVS_14935 PF00809 Pterin binding enzyme HVS_14940 PF02541 Ppx/GppA phosphatase family HVS_14945 PF00404 Dockerin type I domain HVS_14945 PF00756 Putative esterase HVS_14945 PF00331 Glycosyl hydrolase family 10 HVS_14945 PF03422 Carbohydrate binding module (family 6) HVS_14950 PF07691 PA14 domain HVS_14950 PF12791 Anti-sigma factor N-terminus HVS_14955 PF04542 Sigma-70 region 2 HVS_14960 PF06782 Uncharacterised protein family (UPF0236) HVS_14965 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HVS_14970 PF02578 Multi-copper polyphenol oxidoreductase laccase HVS_15000 PF01227 GTP cyclohydrolase I HVS_15010 PF01726 LexA DNA binding domain HVS_15010 PF00717 Peptidase S24-like HVS_15015 PF00180 Isocitrate/isopropylmalate dehydrogenase HVS_15020 PF04542 Sigma-70 region 2 HVS_15040 PF00395 S-layer homology domain HVS_15040 PF00963 Cohesin domain HVS_15045 PF00128 Alpha amylase, catalytic domain HVS_15045 PF00395 S-layer homology domain HVS_15045 PF02903 Alpha amylase, N-terminal ig-like domain HVS_15050 PF12833 Helix-turn-helix domain HVS_15050 PF02311 AraC-like ligand binding domain HVS_15055 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) HVS_15060 PF12146 Serine aminopeptidase, S33 HVS_15070 PF02561 Flagellar protein FliS HVS_15075 PF02465 Flagellar hook-associated protein 2 N-terminus HVS_15075 PF07195 Flagellar hook-associated protein 2 C-terminus HVS_15075 PF07196 Flagellin hook IN motif HVS_15100 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HVS_15135 PF06782 Uncharacterised protein family (UPF0236) HVS_15145 PF00589 Phage integrase family HVS_15150 PF01420 Type I restriction modification DNA specificity domain HVS_15155 PF02384 N-6 DNA Methylase HVS_15155 PF12161 HsdM N-terminal domain HVS_15160 PF00271 Helicase conserved C-terminal domain HVS_15160 PF04851 Type III restriction enzyme, res subunit HVS_15160 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) HVS_15160 PF08463 EcoEI R protein C-terminal HVS_15190 PF02542 YgbB family HVS_15195 PF00512 His Kinase A (phospho-acceptor) domain HVS_15195 PF08447 PAS fold HVS_15195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVS_15195 PF00989 PAS fold HVS_15200 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase HVS_15210 PF02559 CarD-like/TRCF domain HVS_15215 PF01416 tRNA pseudouridine synthase HVS_15220 PF00480 ROK family HVS_15225 PF02361 Cobalt transport protein HVS_15230 PF00005 ABC transporter HVS_15235 PF05175 Methyltransferase small domain HVS_15240 PF00005 ABC transporter HVS_15245 PF01196 Ribosomal protein L17 HVS_15250 PF01000 RNA polymerase Rpb3/RpoA insert domain HVS_15250 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain HVS_15250 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain HVS_15255 PF01479 S4 domain HVS_15255 PF00163 Ribosomal protein S4/S9 N-terminal domain HVS_15260 PF00411 Ribosomal protein S11 HVS_15265 PF00416 Ribosomal protein S13/S18 HVS_15270 PF00444 Ribosomal protein L36 HVS_15275 PF01176 Translation initiation factor 1A / IF-1 HVS_15285 PF00557 Metallopeptidase family M24 HVS_15290 PF05191 Adenylate kinase, active site lid HVS_15295 PF00344 SecY translocase HVS_15300 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A HVS_15305 PF00327 Ribosomal protein L30p/L7e HVS_15310 PF00333 Ribosomal protein S5, N-terminal domain HVS_15310 PF03719 Ribosomal protein S5, C-terminal domain HVS_15315 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast HVS_15320 PF00347 Ribosomal protein L6 HVS_15325 PF00410 Ribosomal protein S8 HVS_15330 PF00281 Ribosomal protein L5 HVS_15330 PF00673 ribosomal L5P family C-terminus HVS_15335 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 HVS_15340 PF00238 Ribosomal protein L14p/L23e HVS_15345 PF00366 Ribosomal protein S17 HVS_15350 PF00831 Ribosomal L29 protein HVS_15355 PF00252 Ribosomal protein L16p/L10e HVS_15360 PF07650 KH domain HVS_15360 PF00189 Ribosomal protein S3, C-terminal domain HVS_15365 PF00237 Ribosomal protein L22p/L17e HVS_15370 PF00203 Ribosomal protein S19 HVS_15375 PF03947 Ribosomal Proteins L2, C-terminal domain HVS_15375 PF00181 Ribosomal Proteins L2, RNA binding domain HVS_15380 PF00276 Ribosomal protein L23 HVS_15385 PF00573 Ribosomal protein L4/L1 family HVS_15390 PF00297 Ribosomal protein L3 HVS_15395 PF00338 Ribosomal protein S10p/S20e HVS_15425 PF04545 Sigma-70, region 4 HVS_15425 PF04539 Sigma-70 region 3 HVS_15425 PF04542 Sigma-70 region 2 HVS_15430 PF13581 Histidine kinase-like ATPase domain HVS_15435 PF01740 STAS domain HVS_15440 PF01336 OB-fold nucleic acid binding domain HVS_15440 PF00152 tRNA synthetases class II (D, K and N) HVS_15445 PF01272 Transcription elongation factor, GreA/GreB, C-term HVS_15445 PF03449 Transcription elongation factor, N-terminal HVS_15450 PF06782 Uncharacterised protein family (UPF0236) HVS_15460 PF00571 CBS domain HVS_15460 PF00478 IMP dehydrogenase / GMP reductase domain HVS_15475 PF00118 TCP-1/cpn60 chaperonin family HVS_15480 PF00166 Chaperonin 10 Kd subunit HVS_15485 PF13749 Putative ATP-dependent DNA helicase recG C-terminal HVS_15485 PF17191 RecG wedge domain HVS_15485 PF00270 DEAD/DEAH box helicase HVS_15490 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase HVS_15490 PF01502 Phosphoribosyl-AMP cyclohydrolase HVS_15495 PF00977 Histidine biosynthesis protein HVS_15500 PF00977 Histidine biosynthesis protein HVS_15505 PF00475 Imidazoleglycerol-phosphate dehydratase HVS_15510 PF00155 Aminotransferase class I and II HVS_15515 PF00815 Histidinol dehydrogenase HVS_15520 PF01634 ATP phosphoribosyltransferase HVS_15525 PF13393 Histidyl-tRNA synthetase HVS_15530 PF05227 CHASE3 domain HVS_15530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HVS_15530 PF00672 HAMP domain HVS_15535 PF13361 UvrD-like helicase C-terminal domain HVS_15535 PF00580 UvrD/REP helicase N-terminal domain HVS_15540 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HVS_15540 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus HVS_15550 PF06271 RDD family HVS_15555 PF01343 Peptidase family S49 HVS_15560 PF00144 Beta-lactamase HVS_15565 PF06463 Molybdenum Cofactor Synthesis C HVS_15565 PF04055 Radical SAM superfamily HVS_15605 PF06782 Uncharacterised protein family (UPF0236) HVS_15615 PF13180 PDZ domain HVS_15620 PF06107 Bacterial protein of unknown function (DUF951) HVS_15630 PF00246 Zinc carboxypeptidase HVS_15630 PF01476 LysM domain HVS_15635 PF01131 DNA topoisomerase HVS_15635 PF01751 Toprim domain HVS_15640 PF05582 YabG peptidase U57 HVS_15645 PF01880 Desulfoferrodoxin HVS_15645 PF06397 Desulfoferrodoxin, N-terminal domain HVS_15650 PF18370 Rhamnogalacturonan I lyases beta-sheet domain HVS_15655 PF04199 Putative cyclase HVS_15660 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain HVS_15660 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain HVS_15665 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HVS_15665 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain HVS_15685 PF01451 Low molecular weight phosphotyrosine protein phosphatase HVS_15735 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HVS_15760 PF05067 Manganese containing catalase HVS_15780 PF05067 Manganese containing catalase HVS_15795 PF00953 Glycosyl transferase family 4 HVS_15800 PF14437 MafB19-like deaminase HVS_15810 PF02502 Ribose/Galactose Isomerase HVS_15815 PF01451 Low molecular weight phosphotyrosine protein phosphatase HVS_15820 PF01300 Telomere recombination HVS_15820 PF03481 Putative GTP-binding controlling metal-binding HVS_15825 PF02535 ZIP Zinc transporter HVS_15830 PF00472 RF-1 domain HVS_15830 PF03462 PCRF domain HVS_15850 PF02677 Epoxyqueuosine reductase QueH HVS_15865 PF00999 Sodium/hydrogen exchanger family HVS_15875 PF00255 Glutathione peroxidase HVS_15880 PF08546 Ketopantoate reductase PanE/ApbA C terminal HVS_15880 PF02558 Ketopantoate reductase PanE/ApbA HVS_15890 PF01145 SPFH domain / Band 7 family HVS_15890 PF15975 Flotillin HVS_15895 PF04715 Anthranilate synthase component I, N terminal region HVS_15895 PF00425 chorismate binding enzyme HVS_15920 PF03358 NADPH-dependent FMN reductase HVS_15925 PF00657 GDSL-like Lipase/Acylhydrolase HVS_15925 PF00404 Dockerin type I domain HVS_15925 PF00150 Cellulase (glycosyl hydrolase family 5) HVS_15925 PF17996 Carbohydrate esterase 2 N-terminal HVS_15930 PF02390 Putative methyltransferase HVS_15935 PF02810 SEC-C motif HVS_15935 PF07516 SecA Wing and Scaffold domain HVS_15935 PF01043 SecA preprotein cross-linking domain HVS_15935 PF07517 SecA DEAD-like domain HVS_15940 PF00884 Sulfatase HVS_15945 PF02690 Na+/Pi-cotransporter HVS_15960 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HVS_15965 PF08281 Sigma-70, region 4 HVS_15965 PF04542 Sigma-70 region 2 HVS_15970 PF00588 SpoU rRNA Methylase family HVS_15970 PF08032 RNA 2'-O ribose methyltransferase substrate binding HVS_15975 PF00636 Ribonuclease III domain HVS_15980 PF01406 tRNA synthetases class I (C) catalytic domain HVS_15980 PF09190 DALR domain HVS_15985 PF00132 Bacterial transferase hexapeptide (six repeats) HVS_15985 PF06426 Serine acetyltransferase, N-terminal HVS_15990 PF00749 tRNA synthetases class I (E and Q), catalytic domain HVS_16025 PF04070 Domain of unknown function (DUF378) HVS_16030 PF01709 Transcriptional regulator HVS_16035 PF00072 Response regulator receiver domain HVS_16035 PF13426 PAS domain HVS_16035 PF08448 PAS fold HVS_16035 PF00512 His Kinase A (phospho-acceptor) domain HVS_16035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVS_16045 PF01205 Uncharacterized protein family UPF0029 HVS_16045 PF09186 Domain of unknown function (DUF1949) HVS_16055 PF06866 Protein of unknown function (DUF1256) HVS_16065 PF02837 Glycosyl hydrolases family 2, sugar binding domain HVS_16065 PF02929 Beta galactosidase small chain HVS_16065 PF00703 Glycosyl hydrolases family 2 HVS_16065 PF02836 Glycosyl hydrolases family 2, TIM barrel domain HVS_16075 PF12116 Stage III sporulation protein D HVS_16085 PF08486 Stage II sporulation protein HVS_16090 PF12891 Glycoside hydrolase family 44 HVS_16090 PF00150 Cellulase (glycosyl hydrolase family 5) HVS_16090 PF00942 Cellulose binding domain HVS_16120 PF18766 SWI2/SNF2 ATPase HVS_16120 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) HVS_16120 PF12008 Type I restriction and modification enzyme - subunit R C terminal HVS_16125 PF01420 Type I restriction modification DNA specificity domain HVS_16130 PF12161 HsdM N-terminal domain HVS_16130 PF02384 N-6 DNA Methylase HVS_16175 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain HVS_16175 PF01113 Dihydrodipicolinate reductase, N-terminus HVS_16190 PF02590 Predicted SPOUT methyltransferase HVS_16195 PF00753 Metallo-beta-lactamase superfamily HVS_16200 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HVS_16220 PF00672 HAMP domain HVS_16220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HVS_16220 PF00512 His Kinase A (phospho-acceptor) domain HVS_16220 PF13426 PAS domain HVS_16225 PF00072 Response regulator receiver domain HVS_16225 PF00486 Transcriptional regulatory protein, C terminal HVS_16240 PF00269 Small, acid-soluble spore proteins, alpha/beta type HVS_16245 PF00571 CBS domain HVS_16255 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain HVS_16255 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain HVS_16260 PF00890 FAD binding domain HVS_16260 PF02910 Fumarate reductase flavoprotein C-term HVS_16265 PF02445 Quinolinate synthetase A protein HVS_16385 PF01522 Polysaccharide deacetylase HVS_16385 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain HVS_16390 PF02743 Cache domain HVS_16390 PF00672 HAMP domain HVS_16390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HVS_16395 PF12833 Helix-turn-helix domain HVS_16395 PF17853 GGDEF-like domain HVS_16405 PF03989 DNA gyrase C-terminal domain, beta-propeller HVS_16405 PF00521 DNA gyrase/topoisomerase IV, subunit A HVS_16410 PF00672 HAMP domain HVS_16410 PF02743 Cache domain HVS_16410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HVS_16415 PF17762 HTH domain found in ParB protein HVS_16415 PF02195 ParB-like nuclease domain HVS_16420 PF02527 rRNA small subunit methyltransferase G HVS_16425 PF01134 Glucose inhibited division protein A HVS_16425 PF13932 GidA associated domain HVS_16430 PF01926 50S ribosome-binding GTPase HVS_16430 PF12631 MnmE helical domain HVS_16430 PF10396 GTP-binding protein TrmE N-terminus HVS_16435 PF01424 R3H domain HVS_16435 PF14804 Jag N-terminus HVS_16440 PF02096 60Kd inner membrane protein HVS_16445 PF00825 Ribonuclease P HVS_16450 PF00468 Ribosomal protein L34