locus-tag class description Clo1313_0001 IPR003593 AAA+ ATPase domain Clo1313_0001 IPR001957 Chromosomal replication control, initiator DnaA Clo1313_0001 IPR020591 Chromosomal replication control, initiator DnaA-like Clo1313_0001 IPR018312 Chromosomal replication control, initiator DnaA, conserved site Clo1313_0001 IPR013317 Chromosomal replication initiator protein DnaA Clo1313_0001 IPR013159 Chromosomal replication initiator, DnaA C-terminal Clo1313_0001 IPR024633 DnaA N-terminal domain Clo1313_0001 IPR038454 DnaA, N-terminal domain superfamily Clo1313_0001 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_0001 IPR010921 Trp repressor/replication initiator Clo1313_0002 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal Clo1313_0002 IPR022637 DNA polymerase III, beta sliding clamp, central Clo1313_0002 IPR001001 DNA polymerase III, beta sliding clamp Clo1313_0002 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal Clo1313_0004 IPR001238 DNA-binding, RecF Clo1313_0004 IPR018078 DNA-binding, RecF, conserved site Clo1313_0004 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_0004 IPR003395 RecF/RecN/SMC, N-terminal Clo1313_0004 IPR042174 DNA-binding RecF, domain 2 Clo1313_0006 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal Clo1313_0006 IPR034160 DNA gyrase subunit B, TOPRIM domain Clo1313_0006 IPR006171 TOPRIM domain Clo1313_0006 IPR018522 DNA topoisomerase, type IIA, conserved site Clo1313_0006 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 Clo1313_0006 IPR013760 DNA topoisomerase, type IIA-like domain superfamily Clo1313_0006 IPR011557 DNA gyrase, subunit B Clo1313_0006 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Clo1313_0006 IPR020568 Ribosomal protein S5 domain 2-type fold Clo1313_0006 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clo1313_0006 IPR003594 Histidine kinase/HSP90-like ATPase Clo1313_0006 IPR002288 DNA gyrase B subunit, C-terminal Clo1313_0006 IPR001241 DNA topoisomerase, type IIA Clo1313_0007 IPR025669 AAA domain Clo1313_0007 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_0008 IPR041468 ParB/Spo0J, HTH domain Clo1313_0008 IPR004437 ParB/RepB/Spo0J partition protein Clo1313_0008 IPR003115 ParB/Sulfiredoxin Clo1313_0008 IPR036086 ParB/Sulfiredoxin superfamily Clo1313_0011 IPR033729 Serine-tRNA ligase catalytic core domain Clo1313_0011 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm Clo1313_0011 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily Clo1313_0011 IPR015866 Serine-tRNA synthetase, type1, N-terminal Clo1313_0011 IPR002317 Serine-tRNA ligase, type1 Clo1313_0011 IPR006195 Aminoacyl-tRNA synthetase, class II Clo1313_0011 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) Clo1313_0012 IPR011701 Major facilitator superfamily Clo1313_0012 IPR020846 Major facilitator superfamily domain Clo1313_0012 IPR036259 MFS transporter superfamily Clo1313_0012 IPR004734 Multidrug resistance protein Clo1313_0012 IPR005829 Sugar transporter, conserved site Clo1313_0012 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG Clo1313_0014 IPR001119 S-layer homology domain Clo1313_0016 IPR007391 Vancomycin resistance VanW Clo1313_0017 IPR000834 Peptidase M14, carboxypeptidase A Clo1313_0017 IPR036779 LysM domain superfamily Clo1313_0017 IPR018392 LysM domain Clo1313_0017 IPR034274 ENP1, carboxypeptidase domain Clo1313_0020 IPR011894 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate Clo1313_0020 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain Clo1313_0020 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain Clo1313_0021 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clo1313_0021 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clo1313_0021 IPR011898 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate Clo1313_0022 IPR029061 Thiamin diphosphate-binding fold Clo1313_0022 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II Clo1313_0022 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal Clo1313_0022 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II Clo1313_0023 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding Clo1313_0023 IPR029061 Thiamin diphosphate-binding fold Clo1313_0030 IPR000559 Formate-tetrahydrofolate ligase, FTHFS Clo1313_0030 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site Clo1313_0030 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_0031 IPR008764 Peptidase U57, YabG Clo1313_0034 IPR020568 Ribosomal protein S5 domain 2-type fold Clo1313_0034 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase Clo1313_0034 IPR006204 GHMP kinase N-terminal domain Clo1313_0034 IPR036554 GHMP kinase, C-terminal domain superfamily Clo1313_0034 IPR013750 GHMP kinase, C-terminal domain Clo1313_0034 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Clo1313_0035 IPR000485 AsnC-type HTH domain Clo1313_0035 IPR011711 GntR, C-terminal Clo1313_0035 IPR000524 Transcription regulator HTH, GntR Clo1313_0035 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_0035 IPR008920 Transcription regulator FadR/GntR, C-terminal Clo1313_0035 IPR036390 Winged helix DNA-binding domain superfamily Clo1313_0036 IPR036163 Heavy metal-associated domain superfamily Clo1313_0036 IPR006121 Heavy metal-associated domain, HMA Clo1313_0036 IPR006122 Heavy metal-associated domain, copper ion-binding Clo1313_0036 IPR017969 Heavy-metal-associated, conserved site Clo1313_0036 IPR000428 Copper ion binding protein Clo1313_0038 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_0038 IPR005936 Peptidase, FtsH Clo1313_0038 IPR003960 ATPase, AAA-type, conserved site Clo1313_0038 IPR003959 ATPase, AAA-type, core Clo1313_0038 IPR041569 AAA ATPase, AAA+ lid domain Clo1313_0038 IPR003593 AAA+ ATPase domain Clo1313_0038 IPR000642 Peptidase M41 Clo1313_0038 IPR037219 Peptidase M41-like Clo1313_0043 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_0043 IPR038734 Uncharacterized protein YhaN, AAA domain Clo1313_0044 IPR038765 Papain-like cysteine peptidase superfamily Clo1313_0044 IPR000064 Endopeptidase, NLPC/P60 domain Clo1313_0046 IPR036365 PGBD-like superfamily Clo1313_0046 IPR014224 Spore cortex-lytic enzyme SleB Clo1313_0046 IPR002477 Peptidoglycan binding-like Clo1313_0046 IPR036366 PGBD superfamily Clo1313_0046 IPR011105 Cell wall hydrolase, SleB Clo1313_0046 IPR042047 Cell wall hydrolase SleB, domain 1 Clo1313_0047 IPR014239 Spore germination YpeB Clo1313_0049 IPR001957 Chromosomal replication control, initiator DnaA Clo1313_0049 IPR020591 Chromosomal replication control, initiator DnaA-like Clo1313_0049 IPR018312 Chromosomal replication control, initiator DnaA, conserved site Clo1313_0049 IPR013317 Chromosomal replication initiator protein DnaA Clo1313_0049 IPR013159 Chromosomal replication initiator, DnaA C-terminal Clo1313_0049 IPR010921 Trp repressor/replication initiator Clo1313_0049 IPR003593 AAA+ ATPase domain Clo1313_0049 IPR024633 DnaA N-terminal domain Clo1313_0049 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_0049 IPR038454 DnaA, N-terminal domain superfamily Clo1313_0051 IPR003607 HD/PDEase domain Clo1313_0051 IPR006674 HD domain Clo1313_0054 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clo1313_0054 IPR001956 Carbohydrate-binding module 3 Clo1313_0054 IPR036966 Carbohydrate-binding module 3 superfamily Clo1313_0054 IPR002102 Cellulosome anchoring protein, cohesin domain Clo1313_0054 IPR005102 Carbohydrate binding X2 domain Clo1313_0054 IPR014756 Immunoglobulin E-set Clo1313_0054 IPR013783 Immunoglobulin-like fold Clo1313_0056 IPR002898 MotA/TolQ/ExbB proton channel Clo1313_0056 IPR000540 Flagellar motor protein MotA, conserved site Clo1313_0057 IPR006665 OmpA-like domain Clo1313_0057 IPR025713 Motility protein B, N-terminal domain Clo1313_0057 IPR036737 OmpA-like domain superfamily Clo1313_0058 IPR010787 Protein of unknown function DUF1385 Clo1313_0059 IPR040758 Release factor glutamine methyltransferase, N-terminal domain Clo1313_0059 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific Clo1313_0059 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clo1313_0059 IPR007848 Methyltransferase small domain Clo1313_0059 IPR002052 DNA methylase, N-6 adenine-specific, conserved site Clo1313_0059 IPR004556 Methyltransferase HemK-like Clo1313_0061 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clo1313_0061 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clo1313_0061 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC Clo1313_0061 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Clo1313_0061 IPR026902 RnfC Barrel sandwich hybrid domain Clo1313_0061 IPR019554 Soluble ligand binding domain Clo1313_0061 IPR009051 Alpha-helical ferredoxin Clo1313_0061 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Clo1313_0062 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD Clo1313_0062 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D Clo1313_0063 IPR007329 FMN-binding Clo1313_0063 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG Clo1313_0064 IPR010968 Ion-translocating oxidoreductase complex subunit E Clo1313_0064 IPR003667 NqrDE/RnfAE Clo1313_0065 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA Clo1313_0065 IPR003667 NqrDE/RnfAE Clo1313_0066 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria Clo1313_0066 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clo1313_0066 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clo1313_0066 IPR007202 4Fe-4S domain Clo1313_0066 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB Clo1313_0068 IPR031322 Shikimate kinase/gluconokinase Clo1313_0068 IPR000623 Shikimate kinase/Threonine synthase-like 1 Clo1313_0068 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_0072 IPR011991 ArsR-like helix-turn-helix domain Clo1313_0072 IPR014036 DeoR C-terminal sensor domain Clo1313_0072 IPR001034 DeoR-type HTH domain Clo1313_0072 IPR037171 NagB/RpiA transferase-like Clo1313_0072 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_0072 IPR036390 Winged helix DNA-binding domain superfamily Clo1313_0072 IPR018356 Transcription regulator, HTH DeoR-type, conserved site Clo1313_0073 IPR018485 Carbohydrate kinase, FGGY, C-terminal Clo1313_0073 IPR018483 Carbohydrate kinase, FGGY, conserved site Clo1313_0073 IPR018484 Carbohydrate kinase, FGGY, N-terminal Clo1313_0073 IPR005999 Glycerol kinase Clo1313_0073 IPR000577 Carbohydrate kinase, FGGY Clo1313_0074 IPR029061 Thiamin diphosphate-binding fold Clo1313_0074 IPR005474 Transketolase, N-terminal Clo1313_0075 IPR029061 Thiamin diphosphate-binding fold Clo1313_0075 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II Clo1313_0075 IPR005475 Transketolase-like, pyrimidine-binding domain Clo1313_0075 IPR033248 Transketolase, C-terminal domain Clo1313_0076 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site Clo1313_0076 IPR011032 GroES-like superfamily Clo1313_0076 IPR036291 NAD(P)-binding domain superfamily Clo1313_0076 IPR020843 Polyketide synthase, enoylreductase domain Clo1313_0076 IPR013154 Alcohol dehydrogenase, N-terminal Clo1313_0076 IPR013149 Alcohol dehydrogenase, C-terminal Clo1313_0077 IPR028082 Periplasmic binding protein-like I Clo1313_0077 IPR025997 Periplasmic binding protein Clo1313_0078 IPR003593 AAA+ ATPase domain Clo1313_0078 IPR003439 ABC transporter-like Clo1313_0078 IPR015861 ABC transporter, ribose import, RbsA Clo1313_0078 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_0078 IPR017871 ABC transporter, conserved site Clo1313_0079 IPR001851 ABC transporter, permease Clo1313_0080 IPR023086 Phosphoglycerate mutase, GpmB, probable Clo1313_0080 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site Clo1313_0080 IPR029033 Histidine phosphatase superfamily Clo1313_0080 IPR013078 Histidine phosphatase superfamily, clade-1 Clo1313_0081 IPR000330 SNF2-related, N-terminal domain Clo1313_0081 IPR038718 SNF2-like, N-terminal domain superfamily Clo1313_0081 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_0081 IPR001650 Helicase, C-terminal Clo1313_0081 IPR014001 Helicase superfamily 1/2, ATP-binding domain Clo1313_0081 IPR007527 Zinc finger, SWIM-type Clo1313_0082 IPR013647 Oligopeptidase F, N-terminal domain Clo1313_0082 IPR001567 Peptidase M3A/M3B catalytic domain Clo1313_0082 IPR004438 Peptidase M3B, oligoendopeptidase F Clo1313_0082 IPR042088 Oligoendopeptidase F, C-terminal domain Clo1313_0084 IPR017853 Glycoside hydrolase superfamily Clo1313_0084 IPR001119 S-layer homology domain Clo1313_0084 IPR010502 Carbohydrate-binding domain, family 9 Clo1313_0084 IPR031158 Glycosyl hydrolases family 10, active site Clo1313_0084 IPR001000 Glycoside hydrolase family 10 domain Clo1313_0084 IPR008979 Galactose-binding-like domain superfamily Clo1313_0084 IPR003305 Carbohydrate-binding, CenC-like Clo1313_0085 IPR016193 Cytidine deaminase-like Clo1313_0085 IPR002125 Cytidine and deoxycytidylate deaminase domain Clo1313_0085 IPR016192 APOBEC/CMP deaminase, zinc-binding Clo1313_0085 IPR028883 tRNA-specific adenosine deaminase Clo1313_0087 IPR013096 Cupin 2, conserved barrel Clo1313_0087 IPR014710 RmlC-like jelly roll fold Clo1313_0087 IPR011051 RmlC-like cupin domain superfamily Clo1313_0088 IPR010611 3D domain Clo1313_0088 IPR036908 RlpA-like domain superfamily Clo1313_0089 IPR000843 LacI-type HTH domain Clo1313_0089 IPR010982 Lambda repressor-like, DNA-binding domain superfamily Clo1313_0089 IPR028082 Periplasmic binding protein-like I Clo1313_0090 IPR005086 Carbohydrate binding module family 17/28 Clo1313_0090 IPR008979 Galactose-binding-like domain superfamily Clo1313_0090 IPR001547 Glycoside hydrolase, family 5 Clo1313_0090 IPR018087 Glycoside hydrolase, family 5, conserved site Clo1313_0090 IPR001119 S-layer homology domain Clo1313_0090 IPR017853 Glycoside hydrolase superfamily Clo1313_0091 IPR008764 Peptidase U57, YabG Clo1313_0092 IPR034144 DNA topoisomerase 3-like, TOPRIM domain Clo1313_0092 IPR000380 DNA topoisomerase, type IA Clo1313_0092 IPR003601 DNA topoisomerase, type IA, domain 2 Clo1313_0092 IPR023406 DNA topoisomerase, type IA, active site Clo1313_0092 IPR013497 DNA topoisomerase, type IA, central Clo1313_0092 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 Clo1313_0092 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 Clo1313_0092 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 Clo1313_0092 IPR023405 DNA topoisomerase, type IA, core domain Clo1313_0092 IPR003602 DNA topoisomerase, type IA, DNA-binding domain Clo1313_0092 IPR006171 TOPRIM domain Clo1313_0092 IPR005738 DNA topoisomerase III Clo1313_0094 IPR010920 LSM domain superfamily Clo1313_0094 IPR023408 Mechanosensitive ion channel MscS domain superfamily Clo1313_0094 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 Clo1313_0094 IPR006685 Mechanosensitive ion channel MscS Clo1313_0094 IPR011066 Mechanosensitive ion channel MscS, C-terminal Clo1313_0096 IPR009003 Peptidase S1, PA clan Clo1313_0096 IPR036034 PDZ superfamily Clo1313_0096 IPR001478 PDZ domain Clo1313_0096 IPR001940 Peptidase S1C Clo1313_0098 IPR002125 Cytidine and deoxycytidylate deaminase domain Clo1313_0098 IPR016193 Cytidine deaminase-like Clo1313_0098 IPR016192 APOBEC/CMP deaminase, zinc-binding Clo1313_0099 IPR039368 Acetolactate synthase large subunit, TPP binding domain Clo1313_0099 IPR012000 Thiamine pyrophosphate enzyme, central domain Clo1313_0099 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain Clo1313_0099 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding Clo1313_0099 IPR012846 Acetolactate synthase, large subunit, biosynthetic Clo1313_0099 IPR029035 DHS-like NAD/FAD-binding domain superfamily Clo1313_0099 IPR029061 Thiamin diphosphate-binding fold Clo1313_0100 IPR004789 Acetolactate synthase, small subunit Clo1313_0100 IPR019455 Acetolactate synthase, small subunit, C-terminal Clo1313_0100 IPR002912 ACT domain Clo1313_0100 IPR039557 AHAS, ACT domain Clo1313_0100 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal Clo1313_0101 IPR013116 Ketol-acid reductoisomerase, N-terminal Clo1313_0101 IPR000506 Ketol-acid reductoisomerase, C-terminal Clo1313_0101 IPR014359 Ketol-acid reductoisomerase, prokaryotic Clo1313_0101 IPR036291 NAD(P)-binding domain superfamily Clo1313_0101 IPR013023 Ketol-acid reductoisomerase Clo1313_0101 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily Clo1313_0102 IPR000891 Pyruvate carboxyltransferase Clo1313_0102 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain Clo1313_0102 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site Clo1313_0102 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily Clo1313_0102 IPR005675 Citramalate synthase Clo1313_0102 IPR013785 Aldolase-type TIM barrel Clo1313_0104 IPR014244 RNA polymerase sigma-I type Clo1313_0104 IPR007627 RNA polymerase sigma-70 region 2 Clo1313_0104 IPR013325 RNA polymerase sigma factor, region 2 Clo1313_0104 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_0104 IPR014284 RNA polymerase sigma-70 like domain Clo1313_0105 IPR024449 Anti-sigma factor RsgI, N-terminal Clo1313_0107 IPR030489 Transcription regulator Rrf2-type, conserved site Clo1313_0107 IPR000944 Transcription regulator Rrf2-type Clo1313_0107 IPR036390 Winged helix DNA-binding domain superfamily Clo1313_0107 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_0108 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily Clo1313_0108 IPR036291 NAD(P)-binding domain superfamily Clo1313_0108 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase Clo1313_0108 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase Clo1313_0108 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal Clo1313_0109 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase Clo1313_0109 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal Clo1313_0109 IPR018214 Glutamyl-tRNA reductase, conserved site Clo1313_0109 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily Clo1313_0109 IPR036291 NAD(P)-binding domain superfamily Clo1313_0109 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase Clo1313_0109 IPR006367 Sirohaem synthase, N-terminal Clo1313_0110 IPR022418 Porphobilinogen deaminase, C-terminal Clo1313_0110 IPR000860 Porphobilinogen deaminase Clo1313_0110 IPR022417 Porphobilinogen deaminase, N-terminal Clo1313_0110 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily Clo1313_0111 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site Clo1313_0111 IPR000878 Tetrapyrrole methylase Clo1313_0111 IPR035996 Tetrapyrrole methylase superfamily Clo1313_0111 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily Clo1313_0111 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase Clo1313_0111 IPR006366 Uroporphyrin-III C-methyltransferase Clo1313_0111 IPR014776 Tetrapyrrole methylase, subdomain 2 Clo1313_0111 IPR014777 Tetrapyrrole methylase, subdomain 1 Clo1313_0112 IPR013785 Aldolase-type TIM barrel Clo1313_0112 IPR030656 Delta-aminolevulinic acid dehydratase, active site Clo1313_0112 IPR001731 Delta-aminolevulinic acid dehydratase Clo1313_0113 IPR015424 Pyridoxal phosphate-dependent transferase Clo1313_0113 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Clo1313_0113 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Clo1313_0113 IPR005814 Aminotransferase class-III Clo1313_0113 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase Clo1313_0114 IPR005669 Thiosulphate/Sulfate-binding protein Clo1313_0114 IPR034408 Sulphate/thiosulphate-binding site Clo1313_0114 IPR000957 Sulphate/thiosulphate-binding, conserved site Clo1313_0115 IPR005667 Sulphate ABC transporter permease protein 2 Clo1313_0115 IPR035906 MetI-like superfamily Clo1313_0115 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Clo1313_0115 IPR011865 Sulphate ABC transporter, permease protein CysT Clo1313_0116 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Clo1313_0116 IPR011866 Sulphate ABC transporter, permease protein CysW Clo1313_0116 IPR005667 Sulphate ABC transporter permease protein 2 Clo1313_0116 IPR035906 MetI-like superfamily Clo1313_0117 IPR008995 Molybdate/tungstate binding, C-terminal Clo1313_0117 IPR005666 Sulphate transport system permease protein 1 Clo1313_0117 IPR024765 TOBE-like domain Clo1313_0117 IPR003593 AAA+ ATPase domain Clo1313_0117 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal Clo1313_0117 IPR003439 ABC transporter-like Clo1313_0117 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_0117 IPR017871 ABC transporter, conserved site Clo1313_0117 IPR041193 CysA, C-terminal regulatory domain Clo1313_0118 IPR011798 Adenosine 5'-phosphosulphate reductase Clo1313_0118 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase Clo1313_0118 IPR002500 Phosphoadenosine phosphosulphate reductase Clo1313_0118 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clo1313_0119 IPR002500 Phosphoadenosine phosphosulphate reductase Clo1313_0119 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clo1313_0119 IPR011784 Sulphate adenylyltransferase, small subunit Clo1313_0120 IPR000795 Transcription factor, GTP-binding domain Clo1313_0120 IPR002891 Adenylyl-sulfate kinase Clo1313_0120 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain Clo1313_0120 IPR009000 Translation protein, beta-barrel domain superfamily Clo1313_0120 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_0120 IPR005225 Small GTP-binding protein domain Clo1313_0120 IPR011779 Sulphate adenylyltransferase, large subunit Clo1313_0120 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Clo1313_0120 IPR031157 Tr-type G domain, conserved site Clo1313_0122 IPR035985 Ubiquitin-activating enzyme Clo1313_0122 IPR000594 THIF-type NAD/FAD binding fold Clo1313_0124 IPR014261 Sulphite reductase, subunit C Clo1313_0124 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site Clo1313_0124 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain Clo1313_0124 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clo1313_0124 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily Clo1313_0124 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain Clo1313_0124 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clo1313_0127 IPR039425 RNA polymerase sigma-70 like Clo1313_0127 IPR014284 RNA polymerase sigma-70 like domain Clo1313_0127 IPR007627 RNA polymerase sigma-70 region 2 Clo1313_0127 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site Clo1313_0127 IPR014294 RNA polymerase sigma-W, bacillaceae Clo1313_0127 IPR013325 RNA polymerase sigma factor, region 2 Clo1313_0127 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_0127 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 Clo1313_0127 IPR013324 RNA polymerase sigma factor, region 3/4-like Clo1313_0133 IPR010720 Alpha-L-arabinofuranosidase, C-terminal Clo1313_0133 IPR013780 Glycosyl hydrolase, all-beta Clo1313_0133 IPR017853 Glycoside hydrolase superfamily Clo1313_0135 IPR008928 Six-hairpin glycosidase superfamily Clo1313_0135 IPR012341 Six-hairpin glycosidase-like superfamily Clo1313_0135 IPR002105 Dockerin type I repeat Clo1313_0135 IPR016134 Dockerin domain Clo1313_0135 IPR036439 Dockerin domain superfamily Clo1313_0135 IPR023309 Endoglucanase F, domain 2 Clo1313_0135 IPR027390 Endoglucanase F, domain 3 Clo1313_0135 IPR000556 Glycoside hydrolase, 48F Clo1313_0137 IPR007197 Radical SAM Clo1313_0137 IPR010505 Molybdenum cofactor synthesis C-terminal Clo1313_0137 IPR013785 Aldolase-type TIM barrel Clo1313_0137 IPR013483 Molybdenum cofactor biosynthesis protein A Clo1313_0137 IPR006638 Elp3/MiaB/NifB Clo1313_0137 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site Clo1313_0138 IPR013785 Aldolase-type TIM barrel Clo1313_0138 IPR006638 Elp3/MiaB/NifB Clo1313_0138 IPR013483 Molybdenum cofactor biosynthesis protein A Clo1313_0138 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site Clo1313_0138 IPR010505 Molybdenum cofactor synthesis C-terminal Clo1313_0138 IPR007197 Radical SAM Clo1313_0139 IPR010505 Molybdenum cofactor synthesis C-terminal Clo1313_0139 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site Clo1313_0139 IPR007197 Radical SAM Clo1313_0139 IPR006638 Elp3/MiaB/NifB Clo1313_0139 IPR013785 Aldolase-type TIM barrel Clo1313_0139 IPR013483 Molybdenum cofactor biosynthesis protein A Clo1313_0142 IPR013785 Aldolase-type TIM barrel Clo1313_0142 IPR006638 Elp3/MiaB/NifB Clo1313_0142 IPR013483 Molybdenum cofactor biosynthesis protein A Clo1313_0142 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site Clo1313_0142 IPR007197 Radical SAM Clo1313_0142 IPR010505 Molybdenum cofactor synthesis C-terminal Clo1313_0143 IPR029044 Nucleotide-diphospho-sugar transferases Clo1313_0143 IPR001173 Glycosyltransferase 2-like Clo1313_0144 IPR005888 dTDP-glucose 4,6-dehydratase Clo1313_0144 IPR016040 NAD(P)-binding domain Clo1313_0144 IPR036291 NAD(P)-binding domain superfamily Clo1313_0145 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase Clo1313_0145 IPR015424 Pyridoxal phosphate-dependent transferase Clo1313_0145 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Clo1313_0145 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Clo1313_0146 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related Clo1313_0146 IPR011051 RmlC-like cupin domain superfamily Clo1313_0146 IPR014710 RmlC-like jelly roll fold Clo1313_0147 IPR036291 NAD(P)-binding domain superfamily Clo1313_0147 IPR013445 CDP-glucose 4,6-dehydratase Clo1313_0147 IPR016040 NAD(P)-binding domain Clo1313_0148 IPR013446 Glucose-1-phosphate cytidylyltransferase Clo1313_0148 IPR005835 Nucleotidyl transferase domain Clo1313_0148 IPR029044 Nucleotide-diphospho-sugar transferases Clo1313_0150 IPR001207 Transposase, mutator type Clo1313_0152 IPR020612 Methylthiotransferase, conserved site Clo1313_0152 IPR006638 Elp3/MiaB/NifB Clo1313_0152 IPR007197 Radical SAM Clo1313_0152 IPR023404 Radical SAM, alpha/beta horseshoe Clo1313_0152 IPR034498 Bacteriochlorophyll C8 methyltransferase Clo1313_0152 IPR006158 Cobalamin (vitamin B12)-binding domain Clo1313_0160 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_0160 IPR017871 ABC transporter, conserved site Clo1313_0160 IPR003439 ABC transporter-like Clo1313_0160 IPR003593 AAA+ ATPase domain Clo1313_0161 IPR035906 MetI-like superfamily Clo1313_0161 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Clo1313_0164 IPR023577 CYTH domain Clo1313_0164 IPR012042 Inorganic triphosphatase NeuTTM/CthTTM-like Clo1313_0164 IPR033469 CYTH-like domain superfamily Clo1313_0165 IPR022371 Exopolyphosphatase Clo1313_0165 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase Clo1313_0165 IPR003695 Ppx/GppA phosphatase Clo1313_0165 IPR030673 Pyrophosphatase, GppA/Ppx-type Clo1313_0166 IPR018211 Alcohol dehydrogenase, iron-type, conserved site Clo1313_0166 IPR039697 Iron-type alcohol dehydrogenase-like Clo1313_0166 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA Clo1313_0168 IPR000489 Pterin-binding domain Clo1313_0168 IPR011005 Dihydropteroate synthase-like Clo1313_0168 IPR006390 Dihydropteroate synthase Clo1313_0169 IPR006157 Dihydroneopterin aldolase/epimerase domain Clo1313_0169 IPR006156 Dihydroneopterin aldolase Clo1313_0170 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK Clo1313_0170 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily Clo1313_0172 IPR008988 Transcriptional repressor, C-terminal Clo1313_0172 IPR013196 Helix-turn-helix, type 11 Clo1313_0172 IPR030855 Bifunctional ligase/repressor BirA Clo1313_0172 IPR004408 Biotin--acetyl-CoA-carboxylase ligase Clo1313_0172 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_0172 IPR004409 Biotin operon repressor, helix-turn-helix domain Clo1313_0172 IPR003142 Biotin protein ligase, C-terminal Clo1313_0172 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain Clo1313_0172 IPR036390 Winged helix DNA-binding domain superfamily Clo1313_0175 IPR004619 Type III pantothenate kinase Clo1313_0177 IPR001000 Glycoside hydrolase family 10 domain Clo1313_0177 IPR017853 Glycoside hydrolase superfamily Clo1313_0177 IPR024449 Anti-sigma factor RsgI, N-terminal Clo1313_0180 IPR000352 Peptide chain release factor class I Clo1313_0180 IPR005139 Peptide chain release factor Clo1313_0180 IPR004373 Peptide chain release factor 1 Clo1313_0181 IPR023498 Zinc transporter ZupT Clo1313_0181 IPR003689 Zinc/iron permease Clo1313_0182 IPR006070 YrdC-like domain Clo1313_0182 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 Clo1313_0182 IPR038385 Threonylcarbamoyl-AMP synthase, C-terminal domain superfamily Clo1313_0182 IPR005145 Putative GTP-binding controlling metal-binding domain Clo1313_0182 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Clo1313_0183 IPR017867 Protein-tyrosine phosphatase, low molecular weight Clo1313_0183 IPR036196 Phosphotyrosine protein phosphatase I superfamily Clo1313_0183 IPR023485 Phosphotyrosine protein phosphatase I Clo1313_0184 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family Clo1313_0184 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily Clo1313_0184 IPR004785 Ribose 5-phosphate isomerase B Clo1313_0185 IPR034332 Uracil phosphoribosyltransferase, bacterial-type Clo1313_0185 IPR000836 Phosphoribosyltransferase domain Clo1313_0185 IPR029057 Phosphoribosyltransferase-like Clo1313_0185 IPR005765 Uracil phosphoribosyl transferase Clo1313_0186 IPR015517 Deoxycytidylate deaminase-related Clo1313_0186 IPR002125 Cytidine and deoxycytidylate deaminase domain Clo1313_0186 IPR013404 Competence operon E, ComEB Clo1313_0186 IPR016193 Cytidine deaminase-like Clo1313_0186 IPR016192 APOBEC/CMP deaminase, zinc-binding Clo1313_0186 IPR035105 Deoxycytidylate deaminase domain Clo1313_0187 IPR000715 Glycosyl transferase, family 4 Clo1313_0187 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site Clo1313_0188 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Clo1313_0188 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like Clo1313_0189 IPR000568 ATP synthase, F0 complex, subunit A Clo1313_0189 IPR035908 ATP synthase, F0 complex, subunit A superfamily Clo1313_0190 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast Clo1313_0190 IPR000454 ATP synthase, F0 complex, subunit C Clo1313_0190 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Clo1313_0190 IPR038662 F1F0 ATP synthase subunit C superfamily Clo1313_0190 IPR002379 V-ATPase proteolipid subunit C-like domain Clo1313_0190 IPR035921 F/V-ATP synthase subunit C superfamily Clo1313_0191 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily Clo1313_0191 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast Clo1313_0191 IPR005864 ATP synthase, F0 complex, subunit b, bacterial Clo1313_0192 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Clo1313_0192 IPR000711 ATPase, OSCP/delta subunit Clo1313_0193 IPR005294 ATP synthase, F1 complex, alpha subunit Clo1313_0193 IPR000793 ATP synthase, alpha subunit, C-terminal Clo1313_0193 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily Clo1313_0193 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain Clo1313_0193 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily Clo1313_0193 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain Clo1313_0193 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_0193 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site Clo1313_0193 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily Clo1313_0193 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain Clo1313_0194 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily Clo1313_0194 IPR000131 ATP synthase, F1 complex, gamma subunit Clo1313_0195 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain Clo1313_0195 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_0195 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal Clo1313_0195 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily Clo1313_0195 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain Clo1313_0195 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site Clo1313_0195 IPR005722 ATP synthase, F1 complex, beta subunit Clo1313_0195 IPR003593 AAA+ ATPase domain Clo1313_0196 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Clo1313_0196 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal Clo1313_0196 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Clo1313_0196 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit Clo1313_0196 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Clo1313_0200 IPR001119 S-layer homology domain Clo1313_0200 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clo1313_0200 IPR002102 Cellulosome anchoring protein, cohesin domain Clo1313_0202 IPR001986 Enolpyruvate transferase domain Clo1313_0202 IPR036968 Enolpyruvate transferase domain superfamily Clo1313_0202 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta Clo1313_0202 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase Clo1313_0203 IPR013486 Sporulation stage II protein D, amidase enhancer LytB Clo1313_0203 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal Clo1313_0203 IPR014225 Sporulation stage II, protein D firmicutes Clo1313_0205 IPR018356 Transcription regulator, HTH DeoR-type, conserved site Clo1313_0205 IPR014208 Sporulation stage III, transcriptional regulator SpoIIID Clo1313_0206 IPR004753 Cell shape determining protein MreB Clo1313_0207 IPR012834 Flagellar basal-body rod FlgG Clo1313_0207 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like Clo1313_0207 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Clo1313_0207 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Clo1313_0207 IPR001444 Flagellar basal body rod protein, N-terminal Clo1313_0207 IPR019776 Flagellar basal body rod protein, conserved site Clo1313_0208 IPR012834 Flagellar basal-body rod FlgG Clo1313_0208 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like Clo1313_0208 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Clo1313_0208 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Clo1313_0208 IPR019776 Flagellar basal body rod protein, conserved site Clo1313_0208 IPR001444 Flagellar basal body rod protein, N-terminal Clo1313_0211 IPR025857 MacB-like periplasmic core domain Clo1313_0211 IPR003593 AAA+ ATPase domain Clo1313_0211 IPR003838 ABC transporter permease protein domain Clo1313_0211 IPR003439 ABC transporter-like Clo1313_0211 IPR017871 ABC transporter, conserved site Clo1313_0211 IPR017911 ABC transporter, macrolide export, ATP-binding domain Clo1313_0211 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_0213 IPR029069 HotDog domain superfamily Clo1313_0213 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ Clo1313_0213 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ Clo1313_0214 IPR005758 UDP-N-acetylmuramate--L-alanine ligase Clo1313_0214 IPR036565 Mur-like, catalytic domain superfamily Clo1313_0214 IPR004101 Mur ligase, C-terminal Clo1313_0214 IPR036615 Mur ligase, C-terminal domain superfamily Clo1313_0214 IPR013221 Mur ligase, central Clo1313_0214 IPR000713 Mur ligase, N-terminal catalytic domain Clo1313_0215 IPR000836 Phosphoribosyltransferase domain Clo1313_0215 IPR029057 Phosphoribosyltransferase-like Clo1313_0215 IPR015265 Bacterial purine repressor, N-terminal Clo1313_0215 IPR010078 Pur operon repressor Clo1313_0215 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_0215 IPR036390 Winged helix DNA-binding domain superfamily Clo1313_0216 IPR007170 Stage V sporulation protein G Clo1313_0216 IPR036751 Stage V sporulation protein G superfamily Clo1313_0217 IPR029044 Nucleotide-diphospho-sugar transferases Clo1313_0217 IPR005835 Nucleotidyl transferase domain Clo1313_0217 IPR001451 Hexapeptide repeat Clo1313_0217 IPR011004 Trimeric LpxA-like superfamily Clo1313_0217 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase Clo1313_0217 IPR038009 GlmU, C-terminal LbH domain Clo1313_0218 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site Clo1313_0218 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain Clo1313_0218 IPR000836 Phosphoribosyltransferase domain Clo1313_0218 IPR029057 Phosphoribosyltransferase-like Clo1313_0218 IPR005946 Ribose-phosphate pyrophosphokinase Clo1313_0218 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type Clo1313_0219 IPR001328 Peptidyl-tRNA hydrolase Clo1313_0219 IPR018171 Peptidyl-tRNA hydrolase, conserved site Clo1313_0219 IPR036416 Peptidyl-tRNA hydrolase superfamily Clo1313_0220 IPR041471 UvrB, interaction domain Clo1313_0220 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_0220 IPR005118 Transcription-repair-coupling factor, C-terminal domain Clo1313_0220 IPR037235 TRCF-like, C-terminal domain Clo1313_0220 IPR001650 Helicase, C-terminal Clo1313_0220 IPR004576 Transcription-repair coupling factor Clo1313_0220 IPR011545 DEAD/DEAH box helicase domain Clo1313_0220 IPR003711 CarD-like/TRCF domain Clo1313_0220 IPR036101 CarD-like/TRCF domain superfamily Clo1313_0220 IPR014001 Helicase superfamily 1/2, ATP-binding domain Clo1313_0221 IPR023059 Foldase protein PrsA Clo1313_0221 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type Clo1313_0221 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Clo1313_0221 IPR027304 Trigger factor/SurA domain superfamily Clo1313_0223 IPR018060 DNA binding HTH domain, AraC-type Clo1313_0223 IPR014710 RmlC-like jelly roll fold Clo1313_0223 IPR018062 HTH domain AraC-type, conserved site Clo1313_0223 IPR020449 Transcription regulator HTH, AraC- type Clo1313_0223 IPR003313 AraC-type arabinose-binding/dimerisation domain Clo1313_0223 IPR037923 Transcription regulator HTH-like Clo1313_0223 IPR009057 Homeobox-like domain superfamily Clo1313_0224 IPR000659 Pyridoxamine 5'-phosphate oxidase Clo1313_0224 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site Clo1313_0224 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative Clo1313_0224 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal Clo1313_0224 IPR012349 FMN-binding split barrel Clo1313_0225 IPR004268 Peptidoglycan biosynthesis protein MurJ Clo1313_0226 IPR001296 Glycosyl transferase, family 1 Clo1313_0226 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Clo1313_0228 IPR003329 Acylneuraminate cytidylyltransferase Clo1313_0228 IPR029044 Nucleotide-diphospho-sugar transferases Clo1313_0228 IPR013830 SGNH hydrolase-type esterase domain Clo1313_0228 IPR036514 SGNH hydrolase superfamily Clo1313_0229 IPR020004 UDP-N-acetylglucosamine 2-epimerase,UDP-hydrolysing Clo1313_0229 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like Clo1313_0229 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Clo1313_0230 IPR013132 N-acetylneuraminic acid synthase, N-terminal Clo1313_0230 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily Clo1313_0230 IPR013974 SAF domain Clo1313_0230 IPR013785 Aldolase-type TIM barrel Clo1313_0230 IPR020007 N-acetylneuraminate synthase Clo1313_0230 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal Clo1313_0232 IPR011004 Trimeric LpxA-like superfamily Clo1313_0232 IPR029044 Nucleotide-diphospho-sugar transferases Clo1313_0232 IPR005835 Nucleotidyl transferase domain Clo1313_0232 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial Clo1313_0232 IPR005836 ADP-glucose pyrophosphorylase, conserved site Clo1313_0232 IPR011831 Glucose-1-phosphate adenylyltransferase Clo1313_0233 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Clo1313_0233 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Clo1313_0233 IPR015424 Pyridoxal phosphate-dependent transferase Clo1313_0233 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase Clo1313_0234 IPR036291 NAD(P)-binding domain superfamily Clo1313_0234 IPR001509 NAD-dependent epimerase/dehydratase Clo1313_0236 IPR005905 D-alanine--D-alanine ligase Clo1313_0236 IPR011095 D-alanine--D-alanine ligase, C-terminal Clo1313_0236 IPR011127 D-alanine--D-alanine ligase, N-terminal domain Clo1313_0236 IPR016185 Pre-ATP-grasp domain superfamily Clo1313_0236 IPR013815 ATP-grasp fold, subdomain 1 Clo1313_0236 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site Clo1313_0236 IPR011761 ATP-grasp fold Clo1313_0237 IPR003362 Bacterial sugar transferase Clo1313_0237 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase Clo1313_0239 IPR036291 NAD(P)-binding domain superfamily Clo1313_0239 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain Clo1313_0239 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clo1313_0242 IPR025669 AAA domain Clo1313_0242 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_0242 IPR005702 Exopolysaccharide synthesis protein Clo1313_0243 IPR016667 Capsular polysaccharide synthesis, CpsB/CapC Clo1313_0243 IPR016195 Polymerase/histidinol phosphatase-like Clo1313_0244 IPR039472 Sporulation stage V protein T, GAF domain Clo1313_0244 IPR007159 SpoVT-AbrB domain Clo1313_0244 IPR014213 Sporulation stage V, protein T Clo1313_0244 IPR029016 GAF-like domain superfamily Clo1313_0244 IPR037914 SpoVT-AbrB domain superfamily Clo1313_0245 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core Clo1313_0245 IPR011551 NTP pyrophosphohydrolase MazG Clo1313_0246 IPR020816 Histone-like DNA-binding protein, conserved site Clo1313_0246 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily Clo1313_0246 IPR000119 Histone-like DNA-binding protein Clo1313_0247 IPR025490 RNA-binding protein, HP1423 type Clo1313_0247 IPR002942 RNA-binding S4 domain Clo1313_0247 IPR036986 RNA-binding S4 domain superfamily Clo1313_0251 IPR012340 Nucleic acid-binding, OB-fold Clo1313_0251 IPR003029 S1 domain Clo1313_0251 IPR022967 RNA-binding domain, S1 Clo1313_0252 IPR003660 HAMP domain Clo1313_0252 IPR004090 Chemotaxis methyl-accepting receptor Clo1313_0252 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Clo1313_0253 IPR011009 Protein kinase-like domain superfamily Clo1313_0253 IPR000719 Protein kinase domain Clo1313_0253 IPR004147 UbiB domain Clo1313_0255 IPR001757 P-type ATPase Clo1313_0255 IPR023214 HAD superfamily Clo1313_0255 IPR008250 P-type ATPase, A domain superfamily Clo1313_0255 IPR023298 P-type ATPase, transmembrane domain superfamily Clo1313_0255 IPR006068 Cation-transporting P-type ATPase, C-terminal Clo1313_0255 IPR004014 Cation-transporting P-type ATPase, N-terminal Clo1313_0255 IPR018303 P-type ATPase, phosphorylation site Clo1313_0255 IPR023299 P-type ATPase, cytoplasmic domain N Clo1313_0255 IPR036412 HAD-like superfamily Clo1313_0270 IPR029045 ClpP/crotonase-like domain superfamily Clo1313_0270 IPR001478 PDZ domain Clo1313_0270 IPR036034 PDZ superfamily Clo1313_0270 IPR004447 C-terminal-processing peptidase S41A Clo1313_0270 IPR005151 Tail specific protease Clo1313_0271 IPR036457 PPM-type phosphatase domain superfamily Clo1313_0271 IPR001932 PPM-type phosphatase domain Clo1313_0271 IPR014221 Sporulation stage II, protein E Clo1313_0275 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal Clo1313_0275 IPR018517 tRNA-dihydrouridine synthase, conserved site Clo1313_0275 IPR013785 Aldolase-type TIM barrel Clo1313_0275 IPR001269 tRNA-dihydrouridine synthase Clo1313_0275 IPR035587 DUS-like, FMN-binding domain Clo1313_0275 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 Clo1313_0276 IPR020823 Cell division protein FtsA Clo1313_0276 IPR003494 SHS2 domain inserted in FtsA Clo1313_0277 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase Clo1313_0277 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain Clo1313_0277 IPR029069 HotDog domain superfamily Clo1313_0277 IPR006683 Thioesterase domain Clo1313_0278 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type Clo1313_0278 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain Clo1313_0278 IPR002797 Polysaccharide biosynthesis protein Clo1313_0280 IPR036390 Winged helix DNA-binding domain superfamily Clo1313_0280 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Clo1313_0280 IPR000524 Transcription regulator HTH, GntR Clo1313_0280 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Clo1313_0280 IPR015424 Pyridoxal phosphate-dependent transferase Clo1313_0280 IPR004839 Aminotransferase, class I/classII Clo1313_0280 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_0282 IPR001451 Hexapeptide repeat Clo1313_0282 IPR011004 Trimeric LpxA-like superfamily Clo1313_0282 IPR018357 Hexapeptide transferase, conserved site Clo1313_0287 IPR017953 Carbohydrate kinase, predicted, conserved site Clo1313_0287 IPR004443 YjeF N-terminal domain Clo1313_0287 IPR036652 YjeF N-terminal domain superfamily Clo1313_0287 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr Clo1313_0287 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase Clo1313_0287 IPR029056 Ribokinase-like Clo1313_0288 IPR000821 Alanine racemase Clo1313_0288 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal Clo1313_0288 IPR001608 Alanine racemase, N-terminal Clo1313_0288 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site Clo1313_0288 IPR029066 PLP-binding barrel Clo1313_0288 IPR011079 Alanine racemase, C-terminal Clo1313_0289 IPR013321 Arc-type ribbon-helix-helix Clo1313_0289 IPR002145 Ribbon-helix-helix protein, CopG Clo1313_0289 IPR010985 Ribbon-helix-helix Clo1313_0290 IPR003477 mRNA interferase PemK-like Clo1313_0290 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor Clo1313_0292 IPR034714 N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase Clo1313_0292 IPR004629 Glycosyl transferase WecB/TagA/CpsF Clo1313_0293 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Clo1313_0293 IPR001296 Glycosyl transferase, family 1 Clo1313_0294 IPR003740 Uncharacterised membrane protein YitT Clo1313_0294 IPR019264 Domain of unknown function DUF2179 Clo1313_0294 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Clo1313_0295 IPR029061 Thiamin diphosphate-binding fold Clo1313_0295 IPR005474 Transketolase, N-terminal Clo1313_0296 IPR033248 Transketolase, C-terminal domain Clo1313_0296 IPR029061 Thiamin diphosphate-binding fold Clo1313_0296 IPR005475 Transketolase-like, pyrimidine-binding domain Clo1313_0296 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II Clo1313_0297 IPR003439 ABC transporter-like Clo1313_0297 IPR017871 ABC transporter, conserved site Clo1313_0297 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_0297 IPR003593 AAA+ ATPase domain Clo1313_0301 IPR038728 Uncharacterized membrane protein YkvI Clo1313_0304 IPR037237 IlvD/EDD, N-terminal domain Clo1313_0304 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site Clo1313_0304 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase Clo1313_0304 IPR042096 Dihydroxy-acid dehydratase, C-terminal Clo1313_0304 IPR004404 Dihydroxy-acid dehydratase Clo1313_0305 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding Clo1313_0305 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain Clo1313_0305 IPR012000 Thiamine pyrophosphate enzyme, central domain Clo1313_0305 IPR029061 Thiamin diphosphate-binding fold Clo1313_0305 IPR029035 DHS-like NAD/FAD-binding domain superfamily Clo1313_0305 IPR012846 Acetolactate synthase, large subunit, biosynthetic Clo1313_0305 IPR039368 Acetolactate synthase large subunit, TPP binding domain Clo1313_0306 IPR038584 Ribosomal protein L33 superfamily Clo1313_0306 IPR001705 Ribosomal protein L33 Clo1313_0306 IPR018264 Ribosomal protein L33, conserved site Clo1313_0306 IPR011332 Zinc-binding ribosomal protein Clo1313_0307 IPR005807 SecE subunit of protein translocation complex, bacterial-like Clo1313_0307 IPR038379 SecE superfamily Clo1313_0307 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit Clo1313_0308 IPR001062 Transcription antitermination protein, NusG Clo1313_0308 IPR008991 Translation protein SH3-like domain superfamily Clo1313_0308 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site Clo1313_0308 IPR036735 NusG, N-terminal domain superfamily Clo1313_0308 IPR006645 NusG, N-terminal Clo1313_0308 IPR005824 KOW Clo1313_0308 IPR014722 Ribosomal protein L2, domain 2 Clo1313_0309 IPR020783 Ribosomal protein L11, C-terminal Clo1313_0309 IPR020784 Ribosomal protein L11, N-terminal Clo1313_0309 IPR000911 Ribosomal protein L11/L12 Clo1313_0309 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily Clo1313_0309 IPR006519 Ribosomal protein L11, bacterial-type Clo1313_0309 IPR036769 Ribosomal protein L11, C-terminal domain superfamily Clo1313_0310 IPR005878 Ribosomal protein L1, bacterial-type Clo1313_0310 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein Clo1313_0310 IPR023673 Ribosomal protein L1, conserved site Clo1313_0310 IPR002143 Ribosomal protein L1 Clo1313_0310 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich Clo1313_0310 IPR023674 Ribosomal protein L1-like Clo1313_0311 IPR022973 Ribosomal protein L10 Clo1313_0311 IPR001790 Ribosomal protein L10P Clo1313_0312 IPR000206 Ribosomal protein L7/L12 Clo1313_0312 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Clo1313_0312 IPR013823 Ribosomal protein L7/L12, C-terminal Clo1313_0312 IPR008932 Ribosomal protein L7/L12, oligomerisation Clo1313_0312 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily Clo1313_0313 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily Clo1313_0313 IPR014724 RNA polymerase Rpb2, OB-fold Clo1313_0313 IPR007641 RNA polymerase Rpb2, domain 7 Clo1313_0313 IPR007645 RNA polymerase Rpb2, domain 3 Clo1313_0313 IPR007642 RNA polymerase Rpb2, domain 2 Clo1313_0313 IPR007644 RNA polymerase, beta subunit, protrusion Clo1313_0313 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain Clo1313_0313 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type Clo1313_0313 IPR015712 DNA-directed RNA polymerase, subunit 2 Clo1313_0313 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain Clo1313_0313 IPR007121 RNA polymerase, beta subunit, conserved site Clo1313_0314 IPR007083 RNA polymerase Rpb1, domain 4 Clo1313_0314 IPR038120 RNA polymerase Rpb1, funnel domain superfamily Clo1313_0314 IPR007081 RNA polymerase Rpb1, domain 5 Clo1313_0314 IPR042102 RNA polymerase Rpb1, domain 3 superfamily Clo1313_0314 IPR012754 DNA-directed RNA polymerase, subunit beta-prime Clo1313_0314 IPR007080 RNA polymerase Rpb1, domain 1 Clo1313_0314 IPR006592 RNA polymerase, N-terminal Clo1313_0314 IPR000722 RNA polymerase, alpha subunit Clo1313_0314 IPR007066 RNA polymerase Rpb1, domain 3 Clo1313_0315 IPR029064 50S ribosomal protein L30e-like Clo1313_0315 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 Clo1313_0315 IPR023460 Ribosomal protein L7Ae, putative Clo1313_0316 IPR012340 Nucleic acid-binding, OB-fold Clo1313_0316 IPR005679 Ribosomal protein S12, bacterial-type Clo1313_0316 IPR006032 Ribosomal protein S12/S23 Clo1313_0317 IPR036823 Ribosomal protein S7 domain superfamily Clo1313_0317 IPR023798 Ribosomal protein S7 domain Clo1313_0317 IPR020606 Ribosomal protein S7, conserved site Clo1313_0317 IPR005717 Ribosomal protein S7, bacterial/organellar-type Clo1313_0317 IPR000235 Ribosomal protein S5/S7 Clo1313_0318 IPR041095 Elongation Factor G, domain II Clo1313_0318 IPR009022 Elongation factor G, domain III Clo1313_0318 IPR004540 Translation elongation factor EFG/EF2 Clo1313_0318 IPR005225 Small GTP-binding protein domain Clo1313_0318 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Clo1313_0318 IPR005517 Translation elongation factor EFG/EF2, domain IV Clo1313_0318 IPR000795 Transcription factor, GTP-binding domain Clo1313_0318 IPR020568 Ribosomal protein S5 domain 2-type fold Clo1313_0318 IPR009000 Translation protein, beta-barrel domain superfamily Clo1313_0318 IPR031157 Tr-type G domain, conserved site Clo1313_0318 IPR004161 Translation elongation factor EFTu-like, domain 2 Clo1313_0318 IPR000640 Elongation factor EFG, domain V-like Clo1313_0318 IPR035649 EFG, domain V Clo1313_0318 IPR035647 EF-G domain III/V-like Clo1313_0318 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_0319 IPR005225 Small GTP-binding protein domain Clo1313_0319 IPR031157 Tr-type G domain, conserved site Clo1313_0319 IPR033720 Elongation factor Tu, domain 2 Clo1313_0319 IPR004161 Translation elongation factor EFTu-like, domain 2 Clo1313_0319 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain Clo1313_0319 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_0319 IPR000795 Transcription factor, GTP-binding domain Clo1313_0319 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Clo1313_0319 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle Clo1313_0319 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal Clo1313_0319 IPR009000 Translation protein, beta-barrel domain superfamily Clo1313_0320 IPR039425 RNA polymerase sigma-70 like Clo1313_0320 IPR014284 RNA polymerase sigma-70 like domain Clo1313_0320 IPR007627 RNA polymerase sigma-70 region 2 Clo1313_0320 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 Clo1313_0320 IPR013324 RNA polymerase sigma factor, region 3/4-like Clo1313_0320 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_0320 IPR013325 RNA polymerase sigma factor, region 2 Clo1313_0323 IPR007391 Vancomycin resistance VanW Clo1313_0324 IPR000032 Phosphocarrier protein HPr-like Clo1313_0324 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site Clo1313_0324 IPR035895 HPr-like superfamily Clo1313_0324 IPR002114 Phosphotransferase system, HPr serine phosphorylation site Clo1313_0325 IPR036618 PtsI, HPr-binding domain superfamily Clo1313_0325 IPR040442 Pyruvate kinase-like domain superfamily Clo1313_0325 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily Clo1313_0325 IPR008731 Phosphotransferase system, enzyme I N-terminal Clo1313_0325 IPR000121 PEP-utilising enzyme, C-terminal Clo1313_0325 IPR024692 Phosphotransferase system, enzyme I Clo1313_0325 IPR036637 Phosphohistidine domain superfamily Clo1313_0325 IPR023151 PEP-utilising enzyme, conserved site Clo1313_0325 IPR006318 Phosphotransferase system, enzyme I-like Clo1313_0325 IPR008279 PEP-utilising enzyme, mobile domain Clo1313_0325 IPR018274 PEP-utilising enzyme, active site Clo1313_0326 IPR038476 UvrC homology region 2 superfamily Clo1313_0326 IPR001162 UvrC family homology region Clo1313_0326 IPR004791 UvrABC system, subunit C Clo1313_0326 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 Clo1313_0326 IPR001943 UVR domain Clo1313_0326 IPR010994 RuvA domain 2-like Clo1313_0326 IPR035901 GIY-YIG endonuclease superfamily Clo1313_0326 IPR036876 UVR domain superfamily Clo1313_0326 IPR000305 GIY-YIG endonuclease Clo1313_0328 IPR027304 Trigger factor/SurA domain superfamily Clo1313_0328 IPR036611 Trigger factor ribosome-binding domain superfamily Clo1313_0328 IPR008880 Trigger factor, C-terminal Clo1313_0328 IPR037041 Trigger factor, C-terminal domain superfamily Clo1313_0328 IPR005215 Trigger factor Clo1313_0328 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain Clo1313_0328 IPR008881 Trigger factor, ribosome-binding, bacterial Clo1313_0329 IPR029045 ClpP/crotonase-like domain superfamily Clo1313_0329 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA Clo1313_0329 IPR033135 ClpP, histidine active site Clo1313_0329 IPR018215 ClpP, Ser active site Clo1313_0329 IPR001907 ATP-dependent Clp protease proteolytic subunit Clo1313_0330 IPR003593 AAA+ ATPase domain Clo1313_0330 IPR003959 ATPase, AAA-type, core Clo1313_0330 IPR019489 Clp ATPase, C-terminal Clo1313_0330 IPR004487 Clp protease, ATP-binding subunit ClpX Clo1313_0330 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_0330 IPR038366 Zinc finger, ClpX C4-type superfamily Clo1313_0330 IPR010603 Zinc finger, ClpX C4-type Clo1313_0331 IPR003593 AAA+ ATPase domain Clo1313_0331 IPR003959 ATPase, AAA-type, core Clo1313_0331 IPR014251 Sporulation protease LonB Clo1313_0331 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Clo1313_0331 IPR020568 Ribosomal protein S5 domain 2-type fold Clo1313_0331 IPR008268 Peptidase S16, active site Clo1313_0331 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_0331 IPR027065 Lon protease Clo1313_0331 IPR008269 Peptidase S16, Lon proteolytic domain Clo1313_0332 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD Clo1313_0332 IPR000905 Gcp-like domain Clo1313_0332 IPR017861 Kae1/TsaD family Clo1313_0332 IPR017860 Peptidase M22, conserved site Clo1313_0333 IPR023346 Lysozyme-like domain superfamily Clo1313_0333 IPR000189 Prokaryotic transglycosylase, active site Clo1313_0333 IPR008258 Transglycosylase SLT domain 1 Clo1313_0336 IPR004013 PHP domain Clo1313_0336 IPR003141 Polymerase/histidinol phosphatase, N-terminal Clo1313_0336 IPR016195 Polymerase/histidinol phosphatase-like Clo1313_0337 IPR023620 Small protein B Clo1313_0337 IPR000037 SsrA-binding protein Clo1313_0337 IPR020081 SsrA-binding protein, conserved site Clo1313_0341 IPR001279 Metallo-beta-lactamase Clo1313_0341 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Clo1313_0341 IPR022877 Protein of unknown funcion UPF0173 Clo1313_0346 IPR005170 Transporter-associated domain Clo1313_0346 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily Clo1313_0346 IPR006037 Regulator of K+ conductance, C-terminal Clo1313_0346 IPR030151 K(+)/H(+) antiporter NhaP Clo1313_0346 IPR023729 K(+)/H(+) antiporter NhaP2 Clo1313_0346 IPR016169 FAD-binding, type PCMH, subdomain 2 Clo1313_0346 IPR036318 FAD-binding, type PCMH-like superfamily Clo1313_0346 IPR006153 Cation/H+ exchanger Clo1313_0346 IPR038770 Sodium/solute symporter superfamily Clo1313_0348 IPR020449 Transcription regulator HTH, AraC- type Clo1313_0348 IPR018062 HTH domain AraC-type, conserved site Clo1313_0348 IPR018060 DNA binding HTH domain, AraC-type Clo1313_0348 IPR011256 Regulatory factor, effector binding domain superfamily Clo1313_0348 IPR029442 GyrI-like small molecule binding domain Clo1313_0348 IPR010499 Bacterial transcription activator, effector binding Clo1313_0348 IPR009057 Homeobox-like domain superfamily Clo1313_0349 IPR018221 Glycoside hydrolase family 9, His active site Clo1313_0349 IPR008928 Six-hairpin glycosidase superfamily Clo1313_0349 IPR012341 Six-hairpin glycosidase-like superfamily Clo1313_0349 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clo1313_0349 IPR001956 Carbohydrate-binding module 3 Clo1313_0349 IPR036966 Carbohydrate-binding module 3 superfamily Clo1313_0349 IPR001701 Glycoside hydrolase family 9 Clo1313_0349 IPR033126 Glycosyl hydrolases family 9, Asp/Glu active sites Clo1313_0350 IPR036966 Carbohydrate-binding module 3 superfamily Clo1313_0350 IPR001956 Carbohydrate-binding module 3 Clo1313_0350 IPR008928 Six-hairpin glycosidase superfamily Clo1313_0350 IPR012341 Six-hairpin glycosidase-like superfamily Clo1313_0350 IPR002105 Dockerin type I repeat Clo1313_0350 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clo1313_0350 IPR016134 Dockerin domain Clo1313_0350 IPR036439 Dockerin domain superfamily Clo1313_0350 IPR018247 EF-Hand 1, calcium-binding site Clo1313_0350 IPR001701 Glycoside hydrolase family 9 Clo1313_0350 IPR033126 Glycosyl hydrolases family 9, Asp/Glu active sites Clo1313_0350 IPR018221 Glycoside hydrolase family 9, His active site Clo1313_0357 IPR041780 PrpE-like, metallophosphatase domain Clo1313_0357 IPR029052 Metallo-dependent phosphatase-like Clo1313_0357 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase Clo1313_0357 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type Clo1313_0357 IPR023937 Bis(5'-nucleosyl)-tetraphosphatase PrpE Clo1313_0358 IPR012312 Haemerythrin-like Clo1313_0358 IPR019903 Repair of iron centres family Clo1313_0359 IPR023957 Anaerobic nitric oxide reductase flavorubredoxin Clo1313_0359 IPR024934 Rubredoxin-like domain Clo1313_0359 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Clo1313_0359 IPR001279 Metallo-beta-lactamase Clo1313_0359 IPR029039 Flavoprotein-like superfamily Clo1313_0359 IPR024935 Rubredoxin domain Clo1313_0359 IPR016440 Rubredoxin-oxygen oxidoreductase Clo1313_0359 IPR008254 Flavodoxin/nitric oxide synthase Clo1313_0360 IPR036390 Winged helix DNA-binding domain superfamily Clo1313_0360 IPR012318 Crp-type HTH domain Clo1313_0360 IPR000595 Cyclic nucleotide-binding domain Clo1313_0360 IPR014710 RmlC-like jelly roll fold Clo1313_0360 IPR018335 Transcription regulator HTH, Crp-type, conserved site Clo1313_0360 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_0360 IPR018490 Cyclic nucleotide-binding-like Clo1313_0364 IPR006419 Nicotinamide mononucleotide transporter PnuC Clo1313_0365 IPR041749 NadR, nicotinamide/nicotinate mononucleotide adenylyltransferase domain Clo1313_0365 IPR010982 Lambda repressor-like, DNA-binding domain superfamily Clo1313_0365 IPR006417 Nicotinamide-nucleotide adenylyltransferase Clo1313_0365 IPR004821 Cytidyltransferase-like domain Clo1313_0365 IPR001387 Cro/C1-type helix-turn-helix domain Clo1313_0365 IPR016429 NAD biosynthesis/regulator protein NadR Clo1313_0365 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_0365 IPR038727 NadR/Ttd14, AAA domain Clo1313_0365 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clo1313_0370 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clo1313_0370 IPR002102 Cellulosome anchoring protein, cohesin domain Clo1313_0370 IPR001119 S-layer homology domain Clo1313_0372 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Clo1313_0372 IPR006158 Cobalamin (vitamin B12)-binding domain Clo1313_0372 IPR036724 Cobalamin-binding domain superfamily Clo1313_0372 IPR012741 Methyltransferase cognate corrinoid protein Clo1313_0372 IPR036594 Methionine synthase domain Clo1313_0373 IPR038071 UROD/MetE-like superfamily Clo1313_0373 IPR006361 Uroporphyrinogen decarboxylase HemE Clo1313_0373 IPR000257 Uroporphyrinogen decarboxylase (URO-D) Clo1313_0374 IPR006361 Uroporphyrinogen decarboxylase HemE Clo1313_0374 IPR000257 Uroporphyrinogen decarboxylase (URO-D) Clo1313_0374 IPR038071 UROD/MetE-like superfamily Clo1313_0375 IPR036010 2Fe-2S ferredoxin-like superfamily Clo1313_0375 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain Clo1313_0375 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Clo1313_0375 IPR012675 Beta-grasp domain superfamily Clo1313_0375 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase Clo1313_0375 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F Clo1313_0375 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Clo1313_0375 IPR017927 FAD-binding domain, ferredoxin reductase-type Clo1313_0375 IPR017938 Riboflavin synthase-like beta-barrel Clo1313_0375 IPR001433 Oxidoreductase FAD/NAD(P)-binding Clo1313_0377 IPR015168 SsuA/THI5-like Clo1313_0377 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Clo1313_0377 IPR010067 Aliphatic sulfonates-binding protein Clo1313_0378 IPR003439 ABC transporter-like Clo1313_0378 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_0378 IPR005890 Nitrate transport ATP-binding subunit C/D Clo1313_0378 IPR017871 ABC transporter, conserved site Clo1313_0378 IPR003593 AAA+ ATPase domain Clo1313_0379 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Clo1313_0379 IPR005889 Nitrate transport permease Clo1313_0379 IPR035906 MetI-like superfamily Clo1313_0380 IPR028154 AMP-dependent ligase, C-terminal Clo1313_0380 IPR011880 Phenylacetate-CoA ligase Clo1313_0380 IPR042099 AMP-dependent synthetase-like superfamily Clo1313_0380 IPR000873 AMP-dependent synthetase/ligase Clo1313_0381 IPR004839 Aminotransferase, class I/classII Clo1313_0381 IPR015424 Pyridoxal phosphate-dependent transferase Clo1313_0381 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Clo1313_0381 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Clo1313_0382 IPR011894 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate Clo1313_0382 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain Clo1313_0382 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain Clo1313_0384 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal Clo1313_0384 IPR029061 Thiamin diphosphate-binding fold Clo1313_0384 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II Clo1313_0384 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II Clo1313_0385 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding Clo1313_0385 IPR029061 Thiamin diphosphate-binding fold Clo1313_0387 IPR006175 YjgF/YER057c/UK114 family Clo1313_0387 IPR006056 RidA family Clo1313_0387 IPR019897 RidA, conserved site Clo1313_0387 IPR035959 RutC-like superfamily Clo1313_0388 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Clo1313_0388 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Clo1313_0388 IPR015424 Pyridoxal phosphate-dependent transferase Clo1313_0388 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme Clo1313_0389 IPR015424 Pyridoxal phosphate-dependent transferase Clo1313_0389 IPR027619 Putative C-S lyase Clo1313_0389 IPR004839 Aminotransferase, class I/classII Clo1313_0389 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Clo1313_0389 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Clo1313_0390 IPR016101 CO dehydrogenase, alpha-bundle Clo1313_0390 IPR010047 Ni-containing CO dehydrogenase Clo1313_0390 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase Clo1313_0390 IPR016099 Prismane-like, alpha/beta-sandwich Clo1313_0390 IPR011254 Prismane-like superfamily Clo1313_0392 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Clo1313_0392 IPR035906 MetI-like superfamily Clo1313_0393 IPR003593 AAA+ ATPase domain Clo1313_0393 IPR003439 ABC transporter-like Clo1313_0393 IPR017871 ABC transporter, conserved site Clo1313_0393 IPR015859 ABC transporter, taurine import, TauD Clo1313_0393 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_0395 IPR001547 Glycoside hydrolase, family 5 Clo1313_0395 IPR018087 Glycoside hydrolase, family 5, conserved site Clo1313_0395 IPR017853 Glycoside hydrolase superfamily Clo1313_0396 IPR023588 Transcription regulator HTH, PurR Clo1313_0396 IPR028082 Periplasmic binding protein-like I Clo1313_0396 IPR000843 LacI-type HTH domain Clo1313_0396 IPR010982 Lambda repressor-like, DNA-binding domain superfamily Clo1313_0397 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Clo1313_0397 IPR000757 Glycoside hydrolase family 16 Clo1313_0397 IPR008263 Glycoside hydrolase, family 16, active site Clo1313_0398 IPR003841 Sodium-dependent phosphate transport protein Clo1313_0398 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein Clo1313_0399 IPR005084 Carbohydrate binding module family 6 Clo1313_0399 IPR026444 Secretion system C-terminal sorting domain Clo1313_0399 IPR017853 Glycoside hydrolase superfamily Clo1313_0399 IPR000805 Glycoside hydrolase family 26 Clo1313_0399 IPR022790 Glycosyl hydrolase family 26 domain Clo1313_0399 IPR008979 Galactose-binding-like domain superfamily Clo1313_0400 IPR001956 Carbohydrate-binding module 3 Clo1313_0400 IPR018221 Glycoside hydrolase family 9, His active site Clo1313_0400 IPR033126 Glycosyl hydrolases family 9, Asp/Glu active sites Clo1313_0400 IPR001701 Glycoside hydrolase family 9 Clo1313_0400 IPR036966 Carbohydrate-binding module 3 superfamily Clo1313_0400 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clo1313_0400 IPR012341 Six-hairpin glycosidase-like superfamily Clo1313_0400 IPR008928 Six-hairpin glycosidase superfamily Clo1313_0401 IPR001867 OmpR/PhoB-type DNA-binding domain Clo1313_0401 IPR011006 CheY-like superfamily Clo1313_0401 IPR039420 Transcriptional regulatory protein WalR-like Clo1313_0401 IPR001789 Signal transduction response regulator, receiver domain Clo1313_0401 IPR016032 Signal transduction response regulator, C-terminal effector Clo1313_0401 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_0402 IPR003594 Histidine kinase/HSP90-like ATPase Clo1313_0402 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Clo1313_0402 IPR035965 PAS domain superfamily Clo1313_0402 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Clo1313_0402 IPR005467 Histidine kinase domain Clo1313_0402 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clo1313_0402 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Clo1313_0403 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clo1313_0403 IPR042078 Lysine tRNA ligase, stem contact fold domain Clo1313_0403 IPR023386 Lysine-tRNA ligase, insertion domain superfamily Clo1313_0403 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site Clo1313_0403 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 Clo1313_0403 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding Clo1313_0403 IPR002904 Lysine-tRNA ligase Clo1313_0405 IPR036061 CheW-like domain superfamily Clo1313_0405 IPR039315 Chemotaxis protein CheW Clo1313_0405 IPR002545 CheW-like domain Clo1313_0406 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Clo1313_0406 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily Clo1313_0406 IPR036061 CheW-like domain superfamily Clo1313_0406 IPR002545 CheW-like domain Clo1313_0406 IPR011006 CheY-like superfamily Clo1313_0406 IPR003594 Histidine kinase/HSP90-like ATPase Clo1313_0406 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clo1313_0406 IPR005467 Histidine kinase domain Clo1313_0406 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Clo1313_0406 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Clo1313_0406 IPR001789 Signal transduction response regulator, receiver domain Clo1313_0406 IPR036641 HPT domain superfamily Clo1313_0406 IPR004105 Histidine kinase CheA-like, homodimeric domain Clo1313_0407 IPR004090 Chemotaxis methyl-accepting receptor Clo1313_0407 IPR003660 HAMP domain Clo1313_0407 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Clo1313_0408 IPR026024 Chemotaxis protein methyltransferase CheR Clo1313_0408 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal Clo1313_0408 IPR000780 MCP methyltransferase, CheR-type Clo1313_0408 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal Clo1313_0408 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily Clo1313_0408 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clo1313_0409 IPR001789 Signal transduction response regulator, receiver domain Clo1313_0409 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase Clo1313_0409 IPR035909 Methylesterase CheB, C-terminal Clo1313_0409 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type Clo1313_0409 IPR011006 CheY-like superfamily Clo1313_0410 IPR004104 Oxidoreductase, C-terminal Clo1313_0410 IPR036291 NAD(P)-binding domain superfamily Clo1313_0410 IPR000683 Oxidoreductase, N-terminal Clo1313_0411 IPR005170 Transporter-associated domain Clo1313_0411 IPR016169 FAD-binding, type PCMH, subdomain 2 Clo1313_0411 IPR036318 FAD-binding, type PCMH-like superfamily Clo1313_0411 IPR002550 CNNM, transmembrane domain Clo1313_0411 IPR000644 CBS domain Clo1313_0413 IPR018087 Glycoside hydrolase, family 5, conserved site Clo1313_0413 IPR001547 Glycoside hydrolase, family 5 Clo1313_0413 IPR018247 EF-Hand 1, calcium-binding site Clo1313_0413 IPR017853 Glycoside hydrolase superfamily Clo1313_0413 IPR016134 Dockerin domain Clo1313_0413 IPR002105 Dockerin type I repeat Clo1313_0413 IPR036439 Dockerin domain superfamily Clo1313_0415 IPR018091 Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site Clo1313_0415 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal Clo1313_0415 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising Clo1313_0415 IPR035077 Phosphoenolpyruvate carboxykinase, C-terminal P-loop domain Clo1313_0415 IPR035078 Phosphoenolpyruvate carboxykinase, GTP-utilising, N-terminal Clo1313_0415 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal Clo1313_0416 IPR036567 Ribosome hibernation promotion factor-like Clo1313_0416 IPR034694 Ribosome hibernation promoting factor, long/plastid Clo1313_0416 IPR003489 Ribosome hibernation promoting factor/RaiA Clo1313_0416 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal Clo1313_0416 IPR038416 Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily Clo1313_0417 IPR005751 ATP-dependent DNA helicase PcrA Clo1313_0417 IPR013986 DExx box DNA helicase domain superfamily Clo1313_0417 IPR014017 UvrD-like DNA helicase, C-terminal Clo1313_0417 IPR000212 DNA helicase, UvrD/REP type Clo1313_0417 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_0417 IPR014016 UvrD-like helicase, ATP-binding domain Clo1313_0417 IPR034739 UvrD/AddA helicase, N-terminal Clo1313_0420 IPR000801 Putative esterase Clo1313_0420 IPR008979 Galactose-binding-like domain superfamily Clo1313_0420 IPR001000 Glycoside hydrolase family 10 domain Clo1313_0420 IPR031158 Glycosyl hydrolases family 10, active site Clo1313_0420 IPR017853 Glycoside hydrolase superfamily Clo1313_0420 IPR036439 Dockerin domain superfamily Clo1313_0420 IPR018247 EF-Hand 1, calcium-binding site Clo1313_0420 IPR029058 Alpha/Beta hydrolase fold Clo1313_0420 IPR003305 Carbohydrate-binding, CenC-like Clo1313_0420 IPR002105 Dockerin type I repeat Clo1313_0420 IPR016134 Dockerin domain Clo1313_0421 IPR004517 ATP phosphoribosyltransferase regulatory subunit Clo1313_0421 IPR006195 Aminoacyl-tRNA synthetase, class II Clo1313_0421 IPR036621 Anticodon-binding domain superfamily Clo1313_0421 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit Clo1313_0421 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain Clo1313_0422 IPR024893 ATP phosphoribosyltransferase HisG, short form Clo1313_0422 IPR001348 ATP phosphoribosyltransferase HisG Clo1313_0422 IPR018198 ATP phosphoribosyltransferase, conserved site Clo1313_0422 IPR013820 ATP phosphoribosyltransferase, catalytic domain Clo1313_0423 IPR022695 Histidinol dehydrogenase, monofunctional Clo1313_0423 IPR001692 Histidinol dehydrogenase, conserved site Clo1313_0423 IPR012131 Histidinol dehydrogenase Clo1313_0423 IPR016161 Aldehyde/histidinol dehydrogenase Clo1313_0424 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site Clo1313_0424 IPR005861 Histidinol-phosphate aminotransferase family Clo1313_0424 IPR015424 Pyridoxal phosphate-dependent transferase Clo1313_0424 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Clo1313_0424 IPR004839 Aminotransferase, class I/classII Clo1313_0424 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Clo1313_0425 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily Clo1313_0425 IPR000807 Imidazoleglycerol-phosphate dehydratase Clo1313_0425 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site Clo1313_0425 IPR020568 Ribosomal protein S5 domain 2-type fold Clo1313_0426 IPR028923 SAICAR synthetase/ADE2, N-terminal Clo1313_0426 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase Clo1313_0427 IPR029062 Class I glutamine amidotransferase-like Clo1313_0427 IPR017926 Glutamine amidotransferase Clo1313_0427 IPR010139 Imidazole glycerol phosphate synthase, subunit H Clo1313_0428 IPR011060 Ribulose-phosphate binding barrel Clo1313_0428 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase Clo1313_0428 IPR013785 Aldolase-type TIM barrel Clo1313_0428 IPR006062 Histidine biosynthesis Clo1313_0428 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA Clo1313_0429 IPR013785 Aldolase-type TIM barrel Clo1313_0429 IPR006062 Histidine biosynthesis Clo1313_0429 IPR004651 Histidine biosynthesis, HisF Clo1313_0429 IPR011060 Ribulose-phosphate binding barrel Clo1313_0430 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain Clo1313_0430 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like Clo1313_0430 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily Clo1313_0430 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase Clo1313_0430 IPR023019 Histidine biosynthesis bifunctional protein HisIE Clo1313_0430 IPR026660 Phosphoribosyl-AMP cyclohydrolase Clo1313_0432 IPR037124 GroES chaperonin superfamily Clo1313_0432 IPR018369 Chaperonin GroES, conserved site Clo1313_0432 IPR011032 GroES-like superfamily Clo1313_0432 IPR020818 GroES chaperonin family Clo1313_0433 IPR018370 Chaperonin Cpn60, conserved site Clo1313_0433 IPR001844 Chaperonin Cpn60 Clo1313_0433 IPR002423 Chaperonin Cpn60/TCP-1 family Clo1313_0433 IPR027409 GroEL-like apical domain superfamily Clo1313_0433 IPR027413 GroEL-like equatorial domain superfamily Clo1313_0433 IPR027410 TCP-1-like chaperonin intermediate domain superfamily Clo1313_0436 IPR011583 Chitinase II Clo1313_0436 IPR017853 Glycoside hydrolase superfamily Clo1313_0436 IPR001223 Glycoside hydrolase family 18, catalytic domain Clo1313_0438 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily Clo1313_0438 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal Clo1313_0438 IPR023459 Transcription elongation factor GreA/GreB family Clo1313_0438 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily Clo1313_0438 IPR028624 Transcription elongation factor GreA/GreB Clo1313_0438 IPR006359 Transcription elongation factor GreA Clo1313_0438 IPR018151 Transcription elongation factor, GreA/GreB, conserved site Clo1313_0438 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal Clo1313_0439 IPR003658 Anti-sigma factor antagonist Clo1313_0439 IPR002645 STAS domain Clo1313_0439 IPR036513 STAS domain superfamily Clo1313_0441 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_0441 IPR013324 RNA polymerase sigma factor, region 3/4-like Clo1313_0441 IPR013325 RNA polymerase sigma factor, region 2 Clo1313_0441 IPR007630 RNA polymerase sigma-70 region 4 Clo1313_0441 IPR007627 RNA polymerase sigma-70 region 2 Clo1313_0441 IPR014322 RNA polymerase sigma-B/F/G type Clo1313_0441 IPR014288 RNA polymerase sigma-B factor Clo1313_0441 IPR014284 RNA polymerase sigma-70 like domain Clo1313_0441 IPR007624 RNA polymerase sigma-70 region 3 Clo1313_0441 IPR000943 RNA polymerase sigma-70 Clo1313_0444 IPR001848 Ribosomal protein S10 Clo1313_0444 IPR018268 Ribosomal protein S10, conserved site Clo1313_0444 IPR027486 Ribosomal protein S10 domain Clo1313_0444 IPR036838 Ribosomal protein S10 domain superfamily Clo1313_0445 IPR019926 Ribosomal protein L3, conserved site Clo1313_0445 IPR000597 Ribosomal protein L3 Clo1313_0445 IPR019927 Ribosomal protein L3, bacterial/organelle-type Clo1313_0445 IPR009000 Translation protein, beta-barrel domain superfamily Clo1313_0446 IPR023574 Ribosomal protein L4 domain superfamily Clo1313_0446 IPR013005 50S ribosomal protein uL4 Clo1313_0446 IPR002136 Ribosomal protein L4/L1e Clo1313_0447 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily Clo1313_0447 IPR012678 Ribosomal protein L23/L15e core domain superfamily Clo1313_0447 IPR013025 Ribosomal protein L25/L23 Clo1313_0448 IPR008991 Translation protein SH3-like domain superfamily Clo1313_0448 IPR014726 Ribosomal protein L2, domain 3 Clo1313_0448 IPR022671 Ribosomal protein L2, conserved site Clo1313_0448 IPR022669 Ribosomal protein L2, C-terminal Clo1313_0448 IPR002171 Ribosomal protein L2 Clo1313_0448 IPR014722 Ribosomal protein L2, domain 2 Clo1313_0448 IPR022666 Ribosomal Proteins L2, RNA binding domain Clo1313_0448 IPR005880 Ribosomal protein L2, bacterial/organellar-type Clo1313_0448 IPR012340 Nucleic acid-binding, OB-fold Clo1313_0449 IPR002222 Ribosomal protein S19/S15 Clo1313_0449 IPR005732 Ribosomal protein S19, bacterial-type Clo1313_0449 IPR020934 Ribosomal protein S19 conserved site Clo1313_0449 IPR023575 Ribosomal protein S19, superfamily Clo1313_0450 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type Clo1313_0450 IPR018260 Ribosomal protein L22/L17, conserved site Clo1313_0450 IPR036394 Ribosomal protein L22/L17 superfamily Clo1313_0450 IPR001063 Ribosomal protein L22/L17 Clo1313_0451 IPR018280 Ribosomal protein S3, conserved site Clo1313_0451 IPR036419 Ribosomal protein S3, C-terminal domain superfamily Clo1313_0451 IPR001351 Ribosomal protein S3, C-terminal Clo1313_0451 IPR005704 Ribosomal protein S3, bacterial-type Clo1313_0451 IPR004044 K Homology domain, type 2 Clo1313_0451 IPR015946 K homology domain-like, alpha/beta Clo1313_0451 IPR004087 K Homology domain Clo1313_0451 IPR009019 K homology domain superfamily, prokaryotic type Clo1313_0452 IPR016180 Ribosomal protein L10e/L16 Clo1313_0452 IPR000114 Ribosomal protein L16 Clo1313_0452 IPR020798 Ribosomal protein L16, conserved site Clo1313_0452 IPR036920 Ribosomal protein L10e/L16 superfamily Clo1313_0453 IPR001854 Ribosomal protein L29/L35 Clo1313_0453 IPR036049 Ribosomal protein L29/L35 superfamily Clo1313_0453 IPR018254 Ribosomal protein L29, conserved site Clo1313_0454 IPR012340 Nucleic acid-binding, OB-fold Clo1313_0454 IPR019984 30S ribosomal protein S17 Clo1313_0454 IPR000266 Ribosomal protein S17/S11 Clo1313_0454 IPR019979 Ribosomal protein S17, conserved site Clo1313_0455 IPR005745 Ribosomal protein L14P, bacterial-type Clo1313_0455 IPR000218 Ribosomal protein L14P Clo1313_0455 IPR036853 Ribosomal protein L14 superfamily Clo1313_0456 IPR041988 Ribosomal Protein L26/L24, KOW domain Clo1313_0456 IPR014722 Ribosomal protein L2, domain 2 Clo1313_0456 IPR003256 Ribosomal protein L24 Clo1313_0456 IPR008991 Translation protein SH3-like domain superfamily Clo1313_0457 IPR002132 Ribosomal protein L5 Clo1313_0457 IPR020930 Ribosomal protein L5, bacterial-type Clo1313_0457 IPR031309 Ribosomal protein L5, C-terminal Clo1313_0457 IPR020929 Ribosomal protein L5, conserved site Clo1313_0457 IPR022803 Ribosomal protein L5 domain superfamily Clo1313_0457 IPR031310 Ribosomal protein L5, N-terminal Clo1313_0458 IPR023053 Ribosomal protein S14, type Z Clo1313_0458 IPR001209 Ribosomal protein S14 Clo1313_0458 IPR018271 Ribosomal protein S14, conserved site Clo1313_0459 IPR000630 Ribosomal protein S8 Clo1313_0459 IPR035987 Ribosomal protein S8 superfamily Clo1313_0460 IPR000702 Ribosomal protein L6 Clo1313_0460 IPR020040 Ribosomal protein L6, alpha-beta domain Clo1313_0460 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily Clo1313_0460 IPR019906 Ribosomal protein L6, bacterial-type Clo1313_0460 IPR002358 Ribosomal protein L6, conserved site Clo1313_0461 IPR005484 Ribosomal protein L18 Clo1313_0461 IPR004389 Ribosomal protein L18, bacterial-type Clo1313_0462 IPR000851 Ribosomal protein S5 Clo1313_0462 IPR005712 Ribosomal protein S5, bacterial-type Clo1313_0462 IPR005324 Ribosomal protein S5, C-terminal Clo1313_0462 IPR020568 Ribosomal protein S5 domain 2-type fold Clo1313_0462 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Clo1313_0462 IPR013810 Ribosomal protein S5, N-terminal Clo1313_0462 IPR018192 Ribosomal protein S5, N-terminal, conserved site Clo1313_0463 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily Clo1313_0463 IPR005996 Ribosomal protein L30, bacterial-type Clo1313_0463 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain Clo1313_0464 IPR005749 Ribosomal protein L15, bacterial-type Clo1313_0464 IPR021131 Ribosomal protein L18e/L15P Clo1313_0464 IPR036227 Ribosomal L18e/L15P superfamily Clo1313_0464 IPR030878 Ribosomal protein L15 Clo1313_0465 IPR026593 Protein translocase subunit SecY Clo1313_0465 IPR002208 SecY/SEC61-alpha family Clo1313_0465 IPR030659 SecY conserved site Clo1313_0465 IPR023201 SecY domain superfamily Clo1313_0466 IPR006259 Adenylate kinase subfamily Clo1313_0466 IPR000850 Adenylate kinase/UMP-CMP kinase Clo1313_0466 IPR033690 Adenylate kinase, conserved site Clo1313_0466 IPR007862 Adenylate kinase, active site lid domain Clo1313_0466 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_0467 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 Clo1313_0467 IPR036005 Creatinase/aminopeptidase-like Clo1313_0467 IPR000994 Peptidase M24 Clo1313_0467 IPR001714 Peptidase M24, methionine aminopeptidase Clo1313_0469 IPR004368 Translation initiation factor IF-1 Clo1313_0469 IPR022967 RNA-binding domain, S1 Clo1313_0469 IPR012340 Nucleic acid-binding, OB-fold Clo1313_0469 IPR006196 RNA-binding domain, S1, IF1 type Clo1313_0470 IPR000473 Ribosomal protein L36 Clo1313_0470 IPR035977 Ribosomal protein L36 superfamily Clo1313_0471 IPR027437 30s ribosomal protein S13, C-terminal Clo1313_0471 IPR001892 Ribosomal protein S13 Clo1313_0471 IPR010979 Ribosomal protein S13-like, H2TH Clo1313_0471 IPR019980 Ribosomal protein S13, bacterial-type Clo1313_0471 IPR018269 Ribosomal protein S13, conserved site Clo1313_0472 IPR001971 Ribosomal protein S11 Clo1313_0472 IPR019981 Ribosomal protein S11, bacterial-type Clo1313_0472 IPR018102 Ribosomal S11, conserved site Clo1313_0472 IPR036967 Ribosomal protein S11 superfamily Clo1313_0473 IPR005709 Ribosomal protein S4, bacterial-type Clo1313_0473 IPR036986 RNA-binding S4 domain superfamily Clo1313_0473 IPR002942 RNA-binding S4 domain Clo1313_0473 IPR022801 Ribosomal protein S4/S9 Clo1313_0473 IPR001912 Ribosomal protein S4/S9, N-terminal Clo1313_0473 IPR018079 Ribosomal protein S4, conserved site Clo1313_0474 IPR011262 DNA-directed RNA polymerase, insert domain Clo1313_0474 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type Clo1313_0474 IPR011773 DNA-directed RNA polymerase, alpha subunit Clo1313_0474 IPR036603 RNA polymerase, RBP11-like subunit Clo1313_0474 IPR011260 RNA polymerase, alpha subunit, C-terminal Clo1313_0474 IPR036643 DNA-directed RNA polymerase, insert domain superfamily Clo1313_0475 IPR036373 Ribosomal protein L17 superfamily Clo1313_0475 IPR000456 Ribosomal protein L17 Clo1313_0476 IPR003439 ABC transporter-like Clo1313_0476 IPR017871 ABC transporter, conserved site Clo1313_0476 IPR003593 AAA+ ATPase domain Clo1313_0476 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_0476 IPR015856 ABC transporter, CbiO/EcfA subunit Clo1313_0476 IPR030947 Energy-coupling factor transporter ATP-binding protein EcfA1 Clo1313_0477 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clo1313_0477 IPR007848 Methyltransferase small domain Clo1313_0480 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class Clo1313_0480 IPR002941 DNA methylase N-4/N-6 Clo1313_0480 IPR002052 DNA methylase, N-6 adenine-specific, conserved site Clo1313_0480 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clo1313_0486 IPR038109 DNA-binding recombinase domain superfamily Clo1313_0486 IPR011109 DNA-binding recombinase domain Clo1313_0486 IPR006118 Recombinase, conserved site Clo1313_0486 IPR006119 Resolvase, N-terminal catalytic domain Clo1313_0486 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily Clo1313_0486 IPR025827 Recombinase zinc beta ribbon domain Clo1313_0487 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_0487 IPR030946 Energy-coupling factor transporter ATP-binding protein EcfA2 Clo1313_0487 IPR015856 ABC transporter, CbiO/EcfA subunit Clo1313_0487 IPR017871 ABC transporter, conserved site Clo1313_0487 IPR003439 ABC transporter-like Clo1313_0487 IPR003593 AAA+ ATPase domain Clo1313_0488 IPR003339 ABC/ECF transporter, transmembrane component Clo1313_0488 IPR024919 ECF transporter transmembrane protein EcfT Clo1313_0489 IPR000600 ROK family Clo1313_0489 IPR004654 Glucokinase ROK Clo1313_0490 IPR020103 Pseudouridine synthase, catalytic domain superfamily Clo1313_0490 IPR001406 Pseudouridine synthase I, TruA Clo1313_0490 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain Clo1313_0490 IPR020095 Pseudouridine synthase I, TruA, C-terminal Clo1313_0491 IPR036101 CarD-like/TRCF domain superfamily Clo1313_0491 IPR003711 CarD-like/TRCF domain Clo1313_0491 IPR042215 CarD-like, C-terminal domain Clo1313_0492 IPR029044 Nucleotide-diphospho-sugar transferases Clo1313_0492 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Clo1313_0492 IPR034683 Cytidylyltransferase IspD/TarI Clo1313_0493 IPR003593 AAA+ ATPase domain Clo1313_0493 IPR003439 ABC transporter-like Clo1313_0493 IPR017871 ABC transporter, conserved site Clo1313_0493 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_0494 IPR032688 ABC-2 family transporter protein Clo1313_0495 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Clo1313_0495 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Clo1313_0495 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Clo1313_0495 IPR005467 Histidine kinase domain Clo1313_0495 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clo1313_0495 IPR003594 Histidine kinase/HSP90-like ATPase Clo1313_0495 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Clo1313_0496 IPR033463 Single cache domain 3 Clo1313_0496 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Clo1313_0496 IPR029151 Periplasmic sensor-like domain superfamily Clo1313_0496 IPR013767 PAS fold Clo1313_0496 IPR003594 Histidine kinase/HSP90-like ATPase Clo1313_0496 IPR000014 PAS domain Clo1313_0496 IPR005467 Histidine kinase domain Clo1313_0496 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clo1313_0496 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB Clo1313_0496 IPR035965 PAS domain superfamily Clo1313_0496 IPR039506 SpoOB, alpha-helical domain Clo1313_0497 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site Clo1313_0497 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase Clo1313_0497 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily Clo1313_0498 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily Clo1313_0498 IPR006195 Aminoacyl-tRNA synthetase, class II Clo1313_0498 IPR033730 Prokaryote proline-tRNA ligase core domain Clo1313_0498 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) Clo1313_0498 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type Clo1313_0498 IPR004154 Anticodon-binding Clo1313_0498 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 Clo1313_0498 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain Clo1313_0498 IPR002316 Proline-tRNA ligase, class IIa Clo1313_0498 IPR036621 Anticodon-binding domain superfamily Clo1313_0499 IPR014044 CAP domain Clo1313_0499 IPR014258 CAP domain, YkwD-like Clo1313_0499 IPR035940 CAP superfamily Clo1313_0500 IPR002105 Dockerin type I repeat Clo1313_0500 IPR016134 Dockerin domain Clo1313_0500 IPR036439 Dockerin domain superfamily Clo1313_0500 IPR018247 EF-Hand 1, calcium-binding site Clo1313_0500 IPR000757 Glycoside hydrolase family 16 Clo1313_0500 IPR008263 Glycoside hydrolase, family 16, active site Clo1313_0500 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Clo1313_0500 IPR008264 Beta-glucanase Clo1313_0501 IPR041351 Exo-beta-D-glucosaminidase, Ig-fold domain Clo1313_0501 IPR017853 Glycoside hydrolase superfamily Clo1313_0501 IPR013783 Immunoglobulin-like fold Clo1313_0501 IPR008979 Galactose-binding-like domain superfamily Clo1313_0501 IPR028829 Exo-beta-D-glucosaminidase Clo1313_0501 IPR005084 Carbohydrate binding module family 6 Clo1313_0501 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily Clo1313_0501 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich Clo1313_0501 IPR006104 Glycosyl hydrolases family 2, sugar binding domain Clo1313_0502 IPR008969 Carboxypeptidase-like, regulatory domain superfamily Clo1313_0502 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clo1313_0502 IPR001956 Carbohydrate-binding module 3 Clo1313_0502 IPR036966 Carbohydrate-binding module 3 superfamily Clo1313_0502 IPR002102 Cellulosome anchoring protein, cohesin domain Clo1313_0502 IPR002105 Dockerin type I repeat Clo1313_0502 IPR016134 Dockerin domain Clo1313_0502 IPR036439 Dockerin domain superfamily Clo1313_0502 IPR018247 EF-Hand 1, calcium-binding site Clo1313_0510 IPR030678 Peptide/nickel binding protein, MppA-type Clo1313_0510 IPR039424 Solute-binding protein family 5 Clo1313_0510 IPR023765 Solute-binding protein family 5, conserved site Clo1313_0510 IPR000914 Solute-binding protein family 5 domain Clo1313_0511 IPR003593 AAA+ ATPase domain Clo1313_0511 IPR003439 ABC transporter-like Clo1313_0511 IPR017871 ABC transporter, conserved site Clo1313_0511 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal Clo1313_0511 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_0512 IPR003593 AAA+ ATPase domain Clo1313_0512 IPR003439 ABC transporter-like Clo1313_0512 IPR017871 ABC transporter, conserved site Clo1313_0512 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal Clo1313_0512 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_0513 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Clo1313_0513 IPR035906 MetI-like superfamily Clo1313_0513 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Clo1313_0514 IPR035906 MetI-like superfamily Clo1313_0514 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Clo1313_0518 IPR000524 Transcription regulator HTH, GntR Clo1313_0518 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_0518 IPR036390 Winged helix DNA-binding domain superfamily Clo1313_0519 IPR003593 AAA+ ATPase domain Clo1313_0519 IPR003439 ABC transporter-like Clo1313_0519 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_0521 IPR001137 Glycoside hydrolase family 11 Clo1313_0521 IPR033119 Glycoside hydrolase family 11, active site 2 Clo1313_0521 IPR033123 Glycosyl hydrolases family 11 (GH11) domain Clo1313_0521 IPR013319 Glycoside hydrolase family 11/12 Clo1313_0521 IPR008979 Galactose-binding-like domain superfamily Clo1313_0521 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Clo1313_0521 IPR005084 Carbohydrate binding module family 6 Clo1313_0521 IPR006584 Cellulose binding, type IV Clo1313_0521 IPR018208 Glycoside hydrolase family 11, active site 1 Clo1313_0522 IPR001137 Glycoside hydrolase family 11 Clo1313_0522 IPR033123 Glycosyl hydrolases family 11 (GH11) domain Clo1313_0522 IPR033119 Glycoside hydrolase family 11, active site 2 Clo1313_0522 IPR006584 Cellulose binding, type IV Clo1313_0522 IPR013319 Glycoside hydrolase family 11/12 Clo1313_0522 IPR005084 Carbohydrate binding module family 6 Clo1313_0522 IPR018208 Glycoside hydrolase family 11, active site 1 Clo1313_0522 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Clo1313_0522 IPR008979 Galactose-binding-like domain superfamily Clo1313_0523 IPR041465 SfsA, N-terminal OB domain Clo1313_0523 IPR040452 Sugar fermentation stimulation protein, C-terminal Clo1313_0523 IPR005224 Sugar fermentation stimulation protein Clo1313_0524 IPR024449 Anti-sigma factor RsgI, N-terminal Clo1313_0525 IPR014244 RNA polymerase sigma-I type Clo1313_0525 IPR007627 RNA polymerase sigma-70 region 2 Clo1313_0525 IPR013325 RNA polymerase sigma factor, region 2 Clo1313_0532 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding Clo1313_0532 IPR003660 HAMP domain Clo1313_0532 IPR033479 Double Cache domain 1 Clo1313_0532 IPR029151 Periplasmic sensor-like domain superfamily Clo1313_0532 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Clo1313_0541 IPR002569 Peptide methionine sulphoxide reductase MsrA Clo1313_0541 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily Clo1313_0542 IPR013785 Aldolase-type TIM barrel Clo1313_0542 IPR036188 FAD/NAD(P)-binding domain superfamily Clo1313_0542 IPR023753 FAD/NAD(P)-binding domain Clo1313_0542 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal Clo1313_0547 IPR002818 DJ-1/PfpI Clo1313_0547 IPR006286 Deglycase PfpI Clo1313_0547 IPR029062 Class I glutamine amidotransferase-like Clo1313_0549 IPR011527 ABC transporter type 1, transmembrane domain Clo1313_0549 IPR003593 AAA+ ATPase domain Clo1313_0549 IPR039421 Type I protein exporter Clo1313_0549 IPR017871 ABC transporter, conserved site Clo1313_0549 IPR011917 ABC transporter, lipid A export, MsbA Clo1313_0549 IPR003439 ABC transporter-like Clo1313_0549 IPR036640 ABC transporter type 1, transmembrane domain superfamily Clo1313_0549 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_0551 IPR001204 Phosphate transporter Clo1313_0554 IPR028261 Dihydroprymidine dehydrogenase domain II Clo1313_0554 IPR036188 FAD/NAD(P)-binding domain superfamily Clo1313_0554 IPR023753 FAD/NAD(P)-binding domain Clo1313_0554 IPR009051 Alpha-helical ferredoxin Clo1313_0554 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain Clo1313_0554 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Clo1313_0555 IPR018392 LysM domain Clo1313_0555 IPR036779 LysM domain superfamily Clo1313_0555 IPR014248 Spore coat assembly protein SafA Clo1313_0556 IPR018392 LysM domain Clo1313_0556 IPR036779 LysM domain superfamily Clo1313_0556 IPR038063 L,D-transpeptidase catalytic domain-like Clo1313_0556 IPR005490 L,D-transpeptidase catalytic domain Clo1313_0558 IPR001189 Manganese/iron superoxide dismutase Clo1313_0558 IPR019833 Manganese/iron superoxide dismutase, binding site Clo1313_0558 IPR019832 Manganese/iron superoxide dismutase, C-terminal Clo1313_0558 IPR019831 Manganese/iron superoxide dismutase, N-terminal Clo1313_0558 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily Clo1313_0558 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily Clo1313_0563 IPR033452 Glycosyl hydrolase family 30, beta sandwich domain Clo1313_0563 IPR001139 Glycoside hydrolase family 30 Clo1313_0563 IPR017853 Glycoside hydrolase superfamily Clo1313_0563 IPR013780 Glycosyl hydrolase, all-beta Clo1313_0564 IPR011854 Carbamoyl dehydratase HypE Clo1313_0564 IPR010918 PurM-like, C-terminal domain Clo1313_0564 IPR036676 PurM-like, C-terminal domain superfamily Clo1313_0564 IPR016188 PurM-like, N-terminal domain Clo1313_0564 IPR036921 PurM-like, N-terminal domain superfamily Clo1313_0565 IPR002780 Hydrogenase formation HypD protein Clo1313_0565 IPR042244 HypD, domain 1 Clo1313_0565 IPR042243 HypD, domain 2 Clo1313_0566 IPR001109 Hydrogenase expression/formation protein, HupF/HypC Clo1313_0566 IPR019812 Hydrogenase assembly chaperone, conserved site Clo1313_0566 IPR037254 HupF/HypC superfamily Clo1313_0567 IPR001792 Acylphosphatase-like domain Clo1313_0567 IPR036046 Acylphosphatase-like domain superfamily Clo1313_0567 IPR017968 Acylphosphatase, conserved site Clo1313_0567 IPR004421 Carbamoyltransferase, HypF-type Clo1313_0567 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Clo1313_0567 IPR041440 HypF, Kae1-like domain Clo1313_0567 IPR006070 YrdC-like domain Clo1313_0567 IPR011125 Zinc finger, HypF-type Clo1313_0568 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_0568 IPR004392 Hydrogenase maturation factor HypB Clo1313_0568 IPR003495 CobW/HypB/UreG, nucleotide-binding domain Clo1313_0571 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site Clo1313_0571 IPR001135 NADH-quinone oxidoreductase, subunit D Clo1313_0571 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Clo1313_0571 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Clo1313_0571 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit Clo1313_0571 IPR001501 Nickel-dependent hydrogenase, large subunit Clo1313_0571 IPR029014 [NiFe]-hydrogenase, large subunit Clo1313_0573 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit Clo1313_0573 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit Clo1313_0575 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Clo1313_0575 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup Clo1313_0575 IPR005663 Monovalent cation proton antiporter subunit A Clo1313_0575 IPR025383 Domain of unknown function DUF4040 Clo1313_0575 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Clo1313_0577 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily Clo1313_0577 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal Clo1313_0577 IPR023459 Transcription elongation factor GreA/GreB family Clo1313_0577 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal Clo1313_0577 IPR028624 Transcription elongation factor GreA/GreB Clo1313_0577 IPR006359 Transcription elongation factor GreA Clo1313_0577 IPR018151 Transcription elongation factor, GreA/GreB, conserved site Clo1313_0577 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily Clo1313_0578 IPR002020 Citrate synthase Clo1313_0578 IPR036969 Citrate synthase superfamily Clo1313_0578 IPR011278 2-methylcitrate synthase/citrate synthase type I Clo1313_0578 IPR016142 Citrate synthase-like, large alpha subdomain Clo1313_0578 IPR016143 Citrate synthase-like, small alpha subdomain Clo1313_0578 IPR024176 Citrate synthase, bacterial-type Clo1313_0578 IPR019810 Citrate synthase active site Clo1313_0579 IPR002129 Pyridoxal phosphate-dependent decarboxylase Clo1313_0579 IPR015424 Pyridoxal phosphate-dependent transferase Clo1313_0579 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Clo1313_0579 IPR023523 Histidine decarboxylase, bacteria Clo1313_0580 IPR039315 Chemotaxis protein CheW Clo1313_0580 IPR036061 CheW-like domain superfamily Clo1313_0580 IPR002545 CheW-like domain Clo1313_0581 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily Clo1313_0581 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding Clo1313_0581 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Clo1313_0581 IPR003660 HAMP domain Clo1313_0581 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site Clo1313_0581 IPR004090 Chemotaxis methyl-accepting receptor Clo1313_0586 IPR002912 ACT domain Clo1313_0586 IPR029009 Allosteric substrate binding domain superfamily Clo1313_0586 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 Clo1313_0586 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain Clo1313_0586 IPR036291 NAD(P)-binding domain superfamily Clo1313_0586 IPR006236 D-3-phosphoglycerate dehydrogenase Clo1313_0586 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Clo1313_0586 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Clo1313_0587 IPR033479 Double Cache domain 1 Clo1313_0587 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding Clo1313_0587 IPR029151 Periplasmic sensor-like domain superfamily Clo1313_0587 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Clo1313_0587 IPR003660 HAMP domain Clo1313_0590 IPR003593 AAA+ ATPase domain Clo1313_0590 IPR041027 FtsK alpha domain Clo1313_0590 IPR002543 FtsK domain Clo1313_0590 IPR018541 FtsK gamma domain Clo1313_0590 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_0590 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_0590 IPR036390 Winged helix DNA-binding domain superfamily Clo1313_0594 IPR006068 Cation-transporting P-type ATPase, C-terminal Clo1313_0594 IPR004014 Cation-transporting P-type ATPase, N-terminal Clo1313_0594 IPR023299 P-type ATPase, cytoplasmic domain N Clo1313_0594 IPR018303 P-type ATPase, phosphorylation site Clo1313_0594 IPR023298 P-type ATPase, transmembrane domain superfamily Clo1313_0594 IPR008250 P-type ATPase, A domain superfamily Clo1313_0594 IPR036412 HAD-like superfamily Clo1313_0594 IPR023214 HAD superfamily Clo1313_0594 IPR001757 P-type ATPase Clo1313_0597 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site Clo1313_0597 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA Clo1313_0598 IPR012338 Beta-lactamase/transpeptidase-like Clo1313_0598 IPR001460 Penicillin-binding protein, transpeptidase Clo1313_0599 IPR020891 Uncharacterised protein family UPF0758, conserved site Clo1313_0599 IPR001405 Uncharacterised protein family UPF0758 Clo1313_0599 IPR010994 RuvA domain 2-like Clo1313_0599 IPR025657 RadC-like JAB domain Clo1313_0599 IPR037518 MPN domain Clo1313_0601 IPR003961 Fibronectin type III Clo1313_0601 IPR036116 Fibronectin type III superfamily Clo1313_0601 IPR001223 Glycoside hydrolase family 18, catalytic domain Clo1313_0601 IPR029070 Chitinase insertion domain superfamily Clo1313_0601 IPR003610 Carbohydrate-binding module family 5/12 Clo1313_0601 IPR036573 Carbohydrate-binding module superfamily 5/12 Clo1313_0601 IPR013783 Immunoglobulin-like fold Clo1313_0601 IPR001579 Glycoside hydrolase, chitinase active site Clo1313_0601 IPR011583 Chitinase II Clo1313_0601 IPR017853 Glycoside hydrolase superfamily Clo1313_0602 IPR001207 Transposase, mutator type Clo1313_0603 IPR008979 Galactose-binding-like domain superfamily Clo1313_0603 IPR022385 Rhs repeat-associated core Clo1313_0603 IPR031325 RHS repeat Clo1313_0603 IPR006530 YD repeat Clo1313_0610 IPR042081 RNA 2'-phosphotransferase, C-terminal domain Clo1313_0610 IPR042080 RNA 2'-phosphotransferase, N-terminal domain Clo1313_0610 IPR022928 RNA 2'-phosphotransferase KptA, putative Clo1313_0610 IPR002745 Phosphotransferase KptA/Tpt1 Clo1313_0613 IPR039069 Carbohydrate esterase 7 family Clo1313_0613 IPR008391 Acetyl xylan esterase Clo1313_0613 IPR029058 Alpha/Beta hydrolase fold Clo1313_0616 IPR003593 AAA+ ATPase domain Clo1313_0616 IPR017871 ABC transporter, conserved site Clo1313_0616 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_0616 IPR003439 ABC transporter-like Clo1313_0618 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Clo1313_0618 IPR035965 PAS domain superfamily Clo1313_0618 IPR000014 PAS domain Clo1313_0618 IPR001610 PAC motif Clo1313_0618 IPR000700 PAS-associated, C-terminal Clo1313_0618 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Clo1313_0618 IPR005467 Histidine kinase domain Clo1313_0618 IPR003660 HAMP domain Clo1313_0618 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clo1313_0618 IPR003594 Histidine kinase/HSP90-like ATPase Clo1313_0618 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Clo1313_0619 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_0619 IPR039420 Transcriptional regulatory protein WalR-like Clo1313_0619 IPR001789 Signal transduction response regulator, receiver domain Clo1313_0619 IPR001867 OmpR/PhoB-type DNA-binding domain Clo1313_0619 IPR011006 CheY-like superfamily Clo1313_0619 IPR016032 Signal transduction response regulator, C-terminal effector Clo1313_0620 IPR009665 Protein of unknown function DUF1256 Clo1313_0620 IPR023430 Peptidase HybD-like domain superfamily Clo1313_0623 IPR036412 HAD-like superfamily Clo1313_0623 IPR006439 HAD hydrolase, subfamily IA Clo1313_0623 IPR023214 HAD superfamily Clo1313_0623 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Clo1313_0623 IPR041492 Haloacid dehalogenase-like hydrolase Clo1313_0624 IPR000150 Cof family Clo1313_0624 IPR023214 HAD superfamily Clo1313_0624 IPR006379 HAD-superfamily hydrolase, subfamily IIB Clo1313_0624 IPR036412 HAD-like superfamily Clo1313_0625 IPR036465 von Willebrand factor A-like domain superfamily Clo1313_0625 IPR002035 von Willebrand factor, type A Clo1313_0625 IPR022156 Uncharacterised protein YfbK, N-terminal Clo1313_0625 IPR021908 Protein of unknown function DUF3520 Clo1313_0626 IPR006638 Elp3/MiaB/NifB Clo1313_0626 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria Clo1313_0626 IPR013785 Aldolase-type TIM barrel Clo1313_0626 IPR007197 Radical SAM Clo1313_0626 IPR023885 4Fe4S-binding SPASM domain Clo1313_0626 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site Clo1313_0626 IPR017200 Coenzyme PQQ synthesis protein E Clo1313_0627 IPR036966 Carbohydrate-binding module 3 superfamily Clo1313_0627 IPR001956 Carbohydrate-binding module 3 Clo1313_0627 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clo1313_0627 IPR008969 Carboxypeptidase-like, regulatory domain superfamily Clo1313_0627 IPR036439 Dockerin domain superfamily Clo1313_0627 IPR018247 EF-Hand 1, calcium-binding site Clo1313_0627 IPR002102 Cellulosome anchoring protein, cohesin domain Clo1313_0627 IPR002105 Dockerin type I repeat Clo1313_0627 IPR016134 Dockerin domain Clo1313_0628 IPR002102 Cellulosome anchoring protein, cohesin domain Clo1313_0628 IPR001119 S-layer homology domain Clo1313_0628 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clo1313_0629 IPR001119 S-layer homology domain Clo1313_0629 IPR002102 Cellulosome anchoring protein, cohesin domain Clo1313_0629 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clo1313_0630 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clo1313_0630 IPR002102 Cellulosome anchoring protein, cohesin domain Clo1313_0630 IPR001119 S-layer homology domain Clo1313_0634 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clo1313_0634 IPR000241 Putative RNA methylase domain Clo1313_0634 IPR004114 THUMP domain Clo1313_0634 IPR002052 DNA methylase, N-6 adenine-specific, conserved site Clo1313_0635 IPR001789 Signal transduction response regulator, receiver domain Clo1313_0635 IPR007492 LytTR DNA-binding domain Clo1313_0635 IPR011006 CheY-like superfamily Clo1313_0636 IPR036968 Enolpyruvate transferase domain superfamily Clo1313_0636 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta Clo1313_0636 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site Clo1313_0636 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase Clo1313_0636 IPR001986 Enolpyruvate transferase domain Clo1313_0637 IPR001789 Signal transduction response regulator, receiver domain Clo1313_0637 IPR014879 Sporulation initiation factor Spo0A, C-terminal Clo1313_0637 IPR011006 CheY-like superfamily Clo1313_0637 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_0637 IPR012052 Sporulation transcription factor Spo0A Clo1313_0637 IPR016032 Signal transduction response regulator, C-terminal effector Clo1313_0638 IPR020816 Histone-like DNA-binding protein, conserved site Clo1313_0638 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily Clo1313_0638 IPR000119 Histone-like DNA-binding protein Clo1313_0640 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain Clo1313_0641 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain Clo1313_0641 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily Clo1313_0641 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain Clo1313_0641 IPR011167 Iron-dependent fumarate hydratase Clo1313_0643 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_0643 IPR001114 Adenylosuccinate synthetase Clo1313_0643 IPR042111 Adenylosuccinate synthetase, domain 3 Clo1313_0643 IPR042110 Adenylosuccinate synthetase, domain 2 Clo1313_0643 IPR042109 Adenylosuccinate synthetase, domain 1 Clo1313_0643 IPR033128 Adenylosuccinate synthase, active site Clo1313_0643 IPR018220 Adenylosuccinate synthase, GTP-binding site Clo1313_0644 IPR036515 Transposase IS200-like superfamily Clo1313_0644 IPR002686 Transposase IS200-like Clo1313_0645 IPR001173 Glycosyltransferase 2-like Clo1313_0645 IPR029044 Nucleotide-diphospho-sugar transferases Clo1313_0648 IPR001173 Glycosyltransferase 2-like Clo1313_0648 IPR029044 Nucleotide-diphospho-sugar transferases Clo1313_0650 IPR039528 DPM1-like Clo1313_0650 IPR001173 Glycosyltransferase 2-like Clo1313_0650 IPR029044 Nucleotide-diphospho-sugar transferases Clo1313_0651 IPR018510 Diaminopimelate epimerase, active site Clo1313_0651 IPR001653 Diaminopimelate epimerase, DapF Clo1313_0652 IPR019942 LL-diaminopimelate aminotransferase/aminotransferase ALD1 Clo1313_0652 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Clo1313_0652 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Clo1313_0652 IPR015424 Pyridoxal phosphate-dependent transferase Clo1313_0652 IPR004839 Aminotransferase, class I/classII Clo1313_0653 IPR004474 Cell envelope-related transcriptional attenuator domain Clo1313_0655 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Clo1313_0655 IPR008275 CoA enzyme activase Clo1313_0656 IPR018317 Queuosine biosynthesis protein QueC Clo1313_0656 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clo1313_0657 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Clo1313_0657 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Clo1313_0658 IPR024924 7-carboxy-7-deazaguanine synthase-like Clo1313_0658 IPR023868 7-carboxy-7-deazaguanine synthase, Clostridial form Clo1313_0658 IPR013785 Aldolase-type TIM barrel Clo1313_0658 IPR007197 Radical SAM Clo1313_0659 IPR036895 Uracil-DNA glycosylase-like domain superfamily Clo1313_0659 IPR005273 Uracil-DNA glycosylase family 4 Clo1313_0659 IPR005122 Uracil-DNA glycosylase-like Clo1313_0660 IPR005273 Uracil-DNA glycosylase family 4 Clo1313_0660 IPR005122 Uracil-DNA glycosylase-like Clo1313_0660 IPR036895 Uracil-DNA glycosylase-like domain superfamily Clo1313_0661 IPR000594 THIF-type NAD/FAD binding fold Clo1313_0661 IPR035985 Ubiquitin-activating enzyme Clo1313_0662 IPR036515 Transposase IS200-like superfamily Clo1313_0662 IPR002686 Transposase IS200-like Clo1313_0665 IPR007184 Mannoside phosphorylase Clo1313_0665 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Clo1313_0666 IPR029044 Nucleotide-diphospho-sugar transferases Clo1313_0666 IPR005835 Nucleotidyl transferase domain Clo1313_0666 IPR037538 UTP--glucose-1-phosphate uridylyltransferase, cyanobacteria Clo1313_0669 IPR011051 RmlC-like cupin domain superfamily Clo1313_0669 IPR001250 Mannose-6-phosphate isomerase, type I Clo1313_0669 IPR014710 RmlC-like jelly roll fold Clo1313_0669 IPR014628 Mannose-6-phosphate isomerase, Firmicutes type, short form Clo1313_0670 IPR003689 Zinc/iron permease Clo1313_0671 IPR016131 Haemerythrin, iron-binding site Clo1313_0671 IPR012312 Haemerythrin-like Clo1313_0671 IPR023504 Bacteriohemerythrin-like protein Clo1313_0671 IPR012827 Haemerythrin, metal-binding domain Clo1313_0671 IPR035938 Hemerythrin-like superfamily Clo1313_0672 IPR012349 FMN-binding split barrel Clo1313_0672 IPR018527 Rubredoxin, iron-binding site Clo1313_0672 IPR024935 Rubredoxin domain Clo1313_0672 IPR024934 Rubredoxin-like domain Clo1313_0672 IPR002563 Flavin reductase like domain Clo1313_0673 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clo1313_0673 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II Clo1313_0673 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clo1313_0673 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain Clo1313_0673 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding Clo1313_0673 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal Clo1313_0673 IPR029061 Thiamin diphosphate-binding fold Clo1313_0673 IPR011895 Pyruvate-flavodoxin oxidoreductase Clo1313_0673 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II Clo1313_0673 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain Clo1313_0673 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain Clo1313_0675 IPR002102 Cellulosome anchoring protein, cohesin domain Clo1313_0675 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clo1313_0675 IPR001119 S-layer homology domain Clo1313_0677 IPR020845 AMP-binding, conserved site Clo1313_0677 IPR042099 AMP-dependent synthetase-like superfamily Clo1313_0677 IPR025110 AMP-binding enzyme, C-terminal domain Clo1313_0677 IPR000873 AMP-dependent synthetase/ligase Clo1313_0677 IPR020459 AMP-binding Clo1313_0678 IPR002068 Alpha crystallin/Hsp20 domain Clo1313_0678 IPR008978 HSP20-like chaperone Clo1313_0679 IPR015797 NUDIX hydrolase-like domain superfamily Clo1313_0679 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clo1313_0679 IPR000086 NUDIX hydrolase domain Clo1313_0679 IPR004821 Cytidyltransferase-like domain Clo1313_0679 IPR041750 Bifunctional NMN adenylyltransferase/Nudix hydrolase, N-terminal NMNAT domain Clo1313_0679 IPR020084 NUDIX hydrolase, conserved site Clo1313_0682 IPR004680 Citrate transporter-like domain Clo1313_0685 IPR008928 Six-hairpin glycosidase superfamily Clo1313_0685 IPR012341 Six-hairpin glycosidase-like superfamily Clo1313_0685 IPR002105 Dockerin type I repeat Clo1313_0685 IPR016134 Dockerin domain Clo1313_0685 IPR019834 Glycoside hydrolase, family 8, conserved site Clo1313_0685 IPR036439 Dockerin domain superfamily Clo1313_0685 IPR018247 EF-Hand 1, calcium-binding site Clo1313_0685 IPR002037 Glycoside hydrolase, family 8 Clo1313_0686 IPR029058 Alpha/Beta hydrolase fold Clo1313_0686 IPR000073 Alpha/beta hydrolase fold-1 Clo1313_0686 IPR000639 Epoxide hydrolase-like Clo1313_0686 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal Clo1313_0689 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Clo1313_0689 IPR015500 Peptidase S8, subtilisin-related Clo1313_0689 IPR000209 Peptidase S8/S53 domain Clo1313_0689 IPR036852 Peptidase S8/S53 domain superfamily Clo1313_0689 IPR022398 Peptidase S8, subtilisin, His-active site Clo1313_0689 IPR023828 Peptidase S8, subtilisin, Ser-active site Clo1313_0689 IPR034202 Subtilisin Carlsberg-like catalytic domain Clo1313_0689 IPR023827 Peptidase S8, subtilisin, Asp-active site Clo1313_0689 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Clo1313_0693 IPR036514 SGNH hydrolase superfamily Clo1313_0693 IPR037459 Rhamnogalacturonan acetylesterase RhgT-like Clo1313_0693 IPR008979 Galactose-binding-like domain superfamily Clo1313_0693 IPR013830 SGNH hydrolase-type esterase domain Clo1313_0698 IPR003593 AAA+ ATPase domain Clo1313_0698 IPR011527 ABC transporter type 1, transmembrane domain Clo1313_0698 IPR003439 ABC transporter-like Clo1313_0698 IPR017871 ABC transporter, conserved site Clo1313_0698 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_0698 IPR039421 Type I protein exporter Clo1313_0698 IPR036640 ABC transporter type 1, transmembrane domain superfamily Clo1313_0699 IPR039421 Type I protein exporter Clo1313_0699 IPR003593 AAA+ ATPase domain Clo1313_0699 IPR011527 ABC transporter type 1, transmembrane domain Clo1313_0699 IPR036640 ABC transporter type 1, transmembrane domain superfamily Clo1313_0699 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_0699 IPR003439 ABC transporter-like Clo1313_0700 IPR002933 Peptidase M20 Clo1313_0700 IPR011650 Peptidase M20, dimerisation domain Clo1313_0700 IPR001160 Peptidase M20C, Xaa-His dipeptidase Clo1313_0701 IPR004485 Cobalamin biosynthesis CobD/CbiB Clo1313_0702 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase Clo1313_0702 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_0703 IPR003805 Adenosylcobinamide-GDP ribazoletransferase Clo1313_0704 IPR023086 Phosphoglycerate mutase, GpmB, probable Clo1313_0704 IPR013078 Histidine phosphatase superfamily, clade-1 Clo1313_0704 IPR029033 Histidine phosphatase superfamily Clo1313_0704 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site Clo1313_0706 IPR001279 Metallo-beta-lactamase Clo1313_0706 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Clo1313_0707 IPR029151 Periplasmic sensor-like domain superfamily Clo1313_0707 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Clo1313_0707 IPR003660 HAMP domain Clo1313_0707 IPR033479 Double Cache domain 1 Clo1313_0708 IPR013785 Aldolase-type TIM barrel Clo1313_0708 IPR000891 Pyruvate carboxyltransferase Clo1313_0709 IPR006251 Homoaconitase/3-isopropylmalate dehydratase, large subunit Clo1313_0709 IPR011823 3-isopropylmalate dehydratase, large subunit, bacteria Clo1313_0709 IPR011826 Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic Clo1313_0709 IPR033941 3-Isopropylmalate dehydratase, catalytic domain Clo1313_0709 IPR018136 Aconitase family, 4Fe-4S cluster binding site Clo1313_0709 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain Clo1313_0709 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 Clo1313_0709 IPR036008 Aconitase, iron-sulfur domain Clo1313_0710 IPR008920 Transcription regulator FadR/GntR, C-terminal Clo1313_0710 IPR011711 GntR, C-terminal Clo1313_0710 IPR036390 Winged helix DNA-binding domain superfamily Clo1313_0710 IPR000485 AsnC-type HTH domain Clo1313_0710 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_0710 IPR000524 Transcription regulator HTH, GntR Clo1313_0711 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clo1313_0711 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal Clo1313_0711 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type Clo1313_0711 IPR031340 Ribosomal RNA small subunit methyltransferase F, first C-terminal domain Clo1313_0711 IPR023267 RNA (C5-cytosine) methyltransferase Clo1313_0712 IPR036986 RNA-binding S4 domain superfamily Clo1313_0712 IPR002942 RNA-binding S4 domain Clo1313_0712 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F Clo1313_0712 IPR006145 Pseudouridine synthase, RsuA/RluA Clo1313_0712 IPR020103 Pseudouridine synthase, catalytic domain superfamily Clo1313_0712 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain Clo1313_0712 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site Clo1313_0715 IPR011006 CheY-like superfamily Clo1313_0715 IPR009057 Homeobox-like domain superfamily Clo1313_0715 IPR018060 DNA binding HTH domain, AraC-type Clo1313_0715 IPR001789 Signal transduction response regulator, receiver domain Clo1313_0717 IPR011831 Glucose-1-phosphate adenylyltransferase Clo1313_0717 IPR005836 ADP-glucose pyrophosphorylase, conserved site Clo1313_0717 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial Clo1313_0717 IPR005835 Nucleotidyl transferase domain Clo1313_0717 IPR029044 Nucleotide-diphospho-sugar transferases Clo1313_0717 IPR011004 Trimeric LpxA-like superfamily Clo1313_0718 IPR005836 ADP-glucose pyrophosphorylase, conserved site Clo1313_0718 IPR029044 Nucleotide-diphospho-sugar transferases Clo1313_0718 IPR005835 Nucleotidyl transferase domain Clo1313_0718 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial Clo1313_0718 IPR011831 Glucose-1-phosphate adenylyltransferase Clo1313_0718 IPR011004 Trimeric LpxA-like superfamily Clo1313_0719 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily Clo1313_0719 IPR001206 Diacylglycerol kinase, catalytic domain Clo1313_0719 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal Clo1313_0719 IPR005218 Diacylglycerol/lipid kinase Clo1313_0720 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) Clo1313_0720 IPR036291 NAD(P)-binding domain superfamily Clo1313_0720 IPR002347 Short-chain dehydrogenase/reductase SDR Clo1313_0721 IPR003593 AAA+ ATPase domain Clo1313_0721 IPR003439 ABC transporter-like Clo1313_0721 IPR017871 ABC transporter, conserved site Clo1313_0721 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_0723 IPR017871 ABC transporter, conserved site Clo1313_0723 IPR017911 ABC transporter, macrolide export, ATP-binding domain Clo1313_0723 IPR025857 MacB-like periplasmic core domain Clo1313_0723 IPR003838 ABC transporter permease protein domain Clo1313_0723 IPR003439 ABC transporter-like Clo1313_0723 IPR003593 AAA+ ATPase domain Clo1313_0723 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_0726 IPR007353 Protein of unknown function DUF421 Clo1313_0726 IPR023090 UPF0702, alpha/beta domain superfamily Clo1313_0727 IPR001448 Small acid-soluble spore protein, alpha/beta-type Clo1313_0727 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site Clo1313_0727 IPR038300 SASP, alpha/beta-type superfamily Clo1313_0730 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal Clo1313_0730 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily Clo1313_0730 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal Clo1313_0730 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A Clo1313_0730 IPR015956 Penicillin-binding protein, C-terminal domain superfamily Clo1313_0730 IPR012338 Beta-lactamase/transpeptidase-like Clo1313_0732 IPR003148 Regulator of K+ conductance, N-terminal Clo1313_0732 IPR006036 Potassium uptake protein TrkA Clo1313_0732 IPR036291 NAD(P)-binding domain superfamily Clo1313_0732 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily Clo1313_0732 IPR006037 Regulator of K+ conductance, C-terminal Clo1313_0733 IPR004772 TrkH potassium transport family Clo1313_0733 IPR003445 Cation transporter Clo1313_0734 IPR002616 tRNA-guanine(15) transglycosylase-like Clo1313_0734 IPR036511 Queuine tRNA-ribosyltransferase-like Clo1313_0734 IPR004803 tRNA-guanine transglycosylase Clo1313_0739 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_0739 IPR027785 UvrD-like helicase C-terminal domain Clo1313_0739 IPR006345 RecD-like DNA helicase Clo1313_0739 IPR003593 AAA+ ATPase domain Clo1313_0739 IPR029493 RecD helicase-like helix-hairpin-helix domain Clo1313_0739 IPR041451 RecD-like DNA helicase, SH3 domain Clo1313_0748 IPR002549 Transmembrane protein TqsA-like Clo1313_0749 IPR003156 DHHA1 domain Clo1313_0749 IPR009000 Translation protein, beta-barrel domain superfamily Clo1313_0749 IPR012947 Threonyl/alanyl tRNA synthetase, SAD Clo1313_0749 IPR002318 Alanine-tRNA ligase, class IIc Clo1313_0749 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily Clo1313_0749 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain Clo1313_0749 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal Clo1313_0749 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily Clo1313_0749 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria Clo1313_0766 IPR001207 Transposase, mutator type Clo1313_0785 IPR001207 Transposase, mutator type Clo1313_0790 IPR001207 Transposase, mutator type Clo1313_0791 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily Clo1313_0791 IPR017941 Rieske [2Fe-2S] iron-sulphur domain Clo1313_0791 IPR036188 FAD/NAD(P)-binding domain superfamily Clo1313_0791 IPR006076 FAD dependent oxidoreductase Clo1313_0791 IPR005805 Rieske iron-sulphur protein, C-terminal Clo1313_0791 IPR038010 YhfW, C-terminal Rieske domain Clo1313_0794 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain Clo1313_0794 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Clo1313_0794 IPR035906 MetI-like superfamily Clo1313_0795 IPR003593 AAA+ ATPase domain Clo1313_0795 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type Clo1313_0795 IPR003439 ABC transporter-like Clo1313_0795 IPR017871 ABC transporter, conserved site Clo1313_0795 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_0800 IPR016181 Acyl-CoA N-acyltransferase Clo1313_0800 IPR002575 Aminoglycoside phosphotransferase Clo1313_0800 IPR000182 GNAT domain Clo1313_0800 IPR011009 Protein kinase-like domain superfamily Clo1313_0805 IPR001940 Peptidase S1C Clo1313_0805 IPR009003 Peptidase S1, PA clan Clo1313_0805 IPR036034 PDZ superfamily Clo1313_0805 IPR001478 PDZ domain Clo1313_0811 IPR039425 RNA polymerase sigma-70 like Clo1313_0811 IPR014284 RNA polymerase sigma-70 like domain Clo1313_0811 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site Clo1313_0811 IPR007627 RNA polymerase sigma-70 region 2 Clo1313_0811 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 Clo1313_0811 IPR013325 RNA polymerase sigma factor, region 2 Clo1313_0811 IPR013324 RNA polymerase sigma factor, region 3/4-like Clo1313_0811 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_0812 IPR021729 Domain of unknown function DUF3298 Clo1313_0812 IPR025303 Deacetylase PdaC Clo1313_0812 IPR037126 PdaC/RsiV-like superfamily Clo1313_0815 IPR020904 Short-chain dehydrogenase/reductase, conserved site Clo1313_0815 IPR036291 NAD(P)-binding domain superfamily Clo1313_0815 IPR002347 Short-chain dehydrogenase/reductase SDR Clo1313_0816 IPR036515 Transposase IS200-like superfamily Clo1313_0816 IPR002686 Transposase IS200-like Clo1313_0820 IPR017736 Glycoside hydrolase, family 1, beta-glucosidase Clo1313_0820 IPR001360 Glycoside hydrolase family 1 Clo1313_0820 IPR018120 Glycoside hydrolase family 1, active site Clo1313_0820 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site Clo1313_0820 IPR017853 Glycoside hydrolase superfamily Clo1313_0822 IPR004471 Branched-chain amino acid transport, AzlC Clo1313_0822 IPR011606 Branched-chain amino acid transport, permease Clo1313_0823 IPR004131 Pyrophosphate-energised proton pump Clo1313_0825 IPR002549 Transmembrane protein TqsA-like Clo1313_0827 IPR002686 Transposase IS200-like Clo1313_0827 IPR036515 Transposase IS200-like superfamily Clo1313_0828 IPR010432 RDD Clo1313_0829 IPR029045 ClpP/crotonase-like domain superfamily Clo1313_0829 IPR004635 Peptidase S49, SppA Clo1313_0829 IPR002142 Peptidase S49 Clo1313_0830 IPR003810 Putative manganese efflux pump Clo1313_0830 IPR022929 Putative manganese efflux pump MntP Clo1313_0833 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_0833 IPR025302 Domain of unknown function DUF4162 Clo1313_0833 IPR003439 ABC transporter-like Clo1313_0833 IPR003593 AAA+ ATPase domain Clo1313_0833 IPR017871 ABC transporter, conserved site Clo1313_0836 IPR006653 Tryptophan synthase, beta chain, conserved site Clo1313_0836 IPR006654 Tryptophan synthase, beta chain Clo1313_0836 IPR023026 Tryptophan synthase beta chain/beta chain-like Clo1313_0836 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Clo1313_0836 IPR001926 Pyridoxal-phosphate dependent enzyme Clo1313_0837 IPR013785 Aldolase-type TIM barrel Clo1313_0837 IPR011060 Ribulose-phosphate binding barrel Clo1313_0837 IPR018204 Tryptophan synthase, alpha chain, active site Clo1313_0837 IPR002028 Tryptophan synthase, alpha chain Clo1313_0838 IPR027470 Cation efflux protein, cytoplasmic domain Clo1313_0838 IPR002524 Cation efflux protein Clo1313_0838 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Clo1313_0838 IPR027469 Cation efflux transmembrane domain superfamily Clo1313_0839 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Clo1313_0839 IPR029151 Periplasmic sensor-like domain superfamily Clo1313_0839 IPR013767 PAS fold Clo1313_0839 IPR003660 HAMP domain Clo1313_0839 IPR003594 Histidine kinase/HSP90-like ATPase Clo1313_0839 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clo1313_0839 IPR005467 Histidine kinase domain Clo1313_0839 IPR035965 PAS domain superfamily Clo1313_0839 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Clo1313_0839 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Clo1313_0839 IPR000700 PAS-associated, C-terminal Clo1313_0839 IPR000014 PAS domain Clo1313_0841 IPR039420 Transcriptional regulatory protein WalR-like Clo1313_0841 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_0841 IPR001789 Signal transduction response regulator, receiver domain Clo1313_0841 IPR016032 Signal transduction response regulator, C-terminal effector Clo1313_0841 IPR001867 OmpR/PhoB-type DNA-binding domain Clo1313_0841 IPR011006 CheY-like superfamily Clo1313_0844 IPR014867 Spore coat protein CotH Clo1313_0845 IPR030389 FeoB-type guanine nucleotide-binding (G) domain Clo1313_0845 IPR003373 Ferrous iron transport protein B Clo1313_0845 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Clo1313_0845 IPR006073 GTP binding domain Clo1313_0845 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_0845 IPR041069 FeoB, cytosolic helical domain Clo1313_0845 IPR011640 Ferrous iron transport protein B, C-terminal Clo1313_0847 IPR022689 Iron dependent repressor Clo1313_0847 IPR036390 Winged helix DNA-binding domain superfamily Clo1313_0847 IPR022687 DTXR-type HTH domain Clo1313_0847 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_0847 IPR001367 Iron dependent repressor, metal binding and dimerisation domain Clo1313_0847 IPR022897 HTH-type transcription regulator MntR Clo1313_0847 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily Clo1313_0849 IPR017853 Glycoside hydrolase superfamily Clo1313_0849 IPR011683 Glycosyl hydrolase family 53 Clo1313_0851 IPR018247 EF-Hand 1, calcium-binding site Clo1313_0851 IPR036439 Dockerin domain superfamily Clo1313_0851 IPR016134 Dockerin domain Clo1313_0851 IPR002105 Dockerin type I repeat Clo1313_0851 IPR015943 WD40/YVTN repeat-like-containing domain superfamily Clo1313_0852 IPR002495 Glycosyl transferase, family 8 Clo1313_0852 IPR013645 Glycosyl transferase, family 8, C-terminal Clo1313_0852 IPR029044 Nucleotide-diphospho-sugar transferases Clo1313_0853 IPR022924 Cardiolipin synthase Clo1313_0853 IPR025202 Phospholipase D-like domain Clo1313_0853 IPR001736 Phospholipase D/Transphosphatidylase Clo1313_0855 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_0855 IPR011006 CheY-like superfamily Clo1313_0855 IPR001867 OmpR/PhoB-type DNA-binding domain Clo1313_0855 IPR016032 Signal transduction response regulator, C-terminal effector Clo1313_0855 IPR001789 Signal transduction response regulator, receiver domain Clo1313_0855 IPR039420 Transcriptional regulatory protein WalR-like Clo1313_0856 IPR005467 Histidine kinase domain Clo1313_0856 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Clo1313_0856 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Clo1313_0856 IPR000700 PAS-associated, C-terminal Clo1313_0856 IPR001610 PAC motif Clo1313_0856 IPR000014 PAS domain Clo1313_0856 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clo1313_0856 IPR003594 Histidine kinase/HSP90-like ATPase Clo1313_0856 IPR003660 HAMP domain Clo1313_0856 IPR035965 PAS domain superfamily Clo1313_0856 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Clo1313_0857 IPR013785 Aldolase-type TIM barrel Clo1313_0857 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site Clo1313_0857 IPR000891 Pyruvate carboxyltransferase Clo1313_0857 IPR005671 2-isopropylmalate synthase, bacterial-type Clo1313_0857 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily Clo1313_0857 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain Clo1313_0858 IPR000073 Alpha/beta hydrolase fold-1 Clo1313_0858 IPR029058 Alpha/Beta hydrolase fold Clo1313_0858 IPR022742 Serine aminopeptidase, S33 Clo1313_0859 IPR032810 CCA-adding enzyme, C-terminal Clo1313_0859 IPR023068 CCA-adding enzyme, firmicutes Clo1313_0859 IPR002646 Poly A polymerase, head domain Clo1313_0859 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Clo1313_0860 IPR000831 Trp repressor Clo1313_0860 IPR010921 Trp repressor/replication initiator Clo1313_0860 IPR013368 TrpR homologue YerC/YecD Clo1313_0860 IPR038116 TrpR-like superfamily Clo1313_0863 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_0863 IPR011116 SecA Wing/Scaffold Clo1313_0863 IPR011130 SecA, preprotein cross-linking domain Clo1313_0863 IPR014018 SecA motor DEAD Clo1313_0863 IPR011115 SecA DEAD-like, N-terminal Clo1313_0863 IPR020937 SecA conserved site Clo1313_0863 IPR000185 Protein translocase subunit SecA Clo1313_0863 IPR004027 SEC-C motif Clo1313_0863 IPR036670 SecA, preprotein cross-linking domain superfamily Clo1313_0863 IPR036266 SecA, Wing/Scaffold superfamily Clo1313_0864 IPR036615 Mur ligase, C-terminal domain superfamily Clo1313_0864 IPR004101 Mur ligase, C-terminal Clo1313_0864 IPR036565 Mur-like, catalytic domain superfamily Clo1313_0864 IPR001645 Folylpolyglutamate synthetase Clo1313_0864 IPR018109 Folylpolyglutamate synthetase, conserved site Clo1313_0864 IPR013221 Mur ligase, central Clo1313_0866 IPR002641 Patatin-like phospholipase domain Clo1313_0866 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Clo1313_0867 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site Clo1313_0867 IPR029144 Threonine synthase, N-terminal Clo1313_0867 IPR037158 Threonine synthase, N-terminal domain superfamily Clo1313_0867 IPR001926 Pyridoxal-phosphate dependent enzyme Clo1313_0867 IPR004450 Threonine synthase-like Clo1313_0867 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Clo1313_0868 IPR001789 Signal transduction response regulator, receiver domain Clo1313_0868 IPR011006 CheY-like superfamily Clo1313_0869 IPR000683 Oxidoreductase, N-terminal Clo1313_0869 IPR036291 NAD(P)-binding domain superfamily Clo1313_0870 IPR029787 Nucleotide cyclase Clo1313_0870 IPR037522 HD-GYP domain Clo1313_0870 IPR006674 HD domain Clo1313_0870 IPR003607 HD/PDEase domain Clo1313_0870 IPR000160 GGDEF domain Clo1313_0871 IPR002912 ACT domain Clo1313_0871 IPR008310 UPF0735 ACT domain-containing protein Clo1313_0872 IPR016204 Homoserine dehydrogenase Clo1313_0872 IPR001342 Homoserine dehydrogenase, catalytic Clo1313_0872 IPR002912 ACT domain Clo1313_0872 IPR019811 Homoserine dehydrogenase, conserved site Clo1313_0872 IPR036291 NAD(P)-binding domain superfamily Clo1313_0872 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding Clo1313_0873 IPR002912 ACT domain Clo1313_0873 IPR001341 Aspartate kinase Clo1313_0873 IPR018042 Aspartate kinase, conserved site Clo1313_0873 IPR027795 CASTOR, ACT domain Clo1313_0873 IPR005260 Aspartate kinase, monofunctional class Clo1313_0873 IPR036393 Acetylglutamate kinase-like superfamily Clo1313_0873 IPR001048 Aspartate/glutamate/uridylate kinase Clo1313_0873 IPR035804 Aspartokinase 3, N-terminal Clo1313_0880 IPR008979 Galactose-binding-like domain superfamily Clo1313_0880 IPR031325 RHS repeat Clo1313_0880 IPR006530 YD repeat Clo1313_0880 IPR022385 Rhs repeat-associated core Clo1313_0883 IPR036265 HIT-like superfamily Clo1313_0883 IPR011146 HIT-like domain Clo1313_0883 IPR001310 Histidine triad (HIT) protein Clo1313_0883 IPR019808 Histidine triad, conserved site Clo1313_0884 IPR002102 Cellulosome anchoring protein, cohesin domain Clo1313_0884 IPR001119 S-layer homology domain Clo1313_0884 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clo1313_0885 IPR002686 Transposase IS200-like Clo1313_0885 IPR036515 Transposase IS200-like superfamily Clo1313_0886 IPR016667 Capsular polysaccharide synthesis, CpsB/CapC Clo1313_0886 IPR016195 Polymerase/histidinol phosphatase-like Clo1313_0887 IPR011051 RmlC-like cupin domain superfamily Clo1313_0887 IPR014710 RmlC-like jelly roll fold Clo1313_0887 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related Clo1313_0890 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_0890 IPR005702 Exopolysaccharide synthesis protein Clo1313_0890 IPR025669 AAA domain Clo1313_0892 IPR036291 NAD(P)-binding domain superfamily Clo1313_0892 IPR001509 NAD-dependent epimerase/dehydratase Clo1313_0896 IPR001296 Glycosyl transferase, family 1 Clo1313_0898 IPR001173 Glycosyltransferase 2-like Clo1313_0898 IPR029044 Nucleotide-diphospho-sugar transferases Clo1313_0901 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily Clo1313_0901 IPR036291 NAD(P)-binding domain superfamily Clo1313_0901 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Clo1313_0901 IPR017476 UDP-glucose/GDP-mannose dehydrogenase Clo1313_0901 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal Clo1313_0901 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type Clo1313_0901 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal Clo1313_0901 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation Clo1313_0903 IPR012340 Nucleic acid-binding, OB-fold Clo1313_0903 IPR000424 Primosome PriB/single-strand DNA-binding Clo1313_0903 IPR011344 Single-stranded DNA-binding protein Clo1313_0904 IPR003362 Bacterial sugar transferase Clo1313_0904 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase Clo1313_0905 IPR001911 Ribosomal protein S21 Clo1313_0905 IPR018278 Ribosomal protein S21, conserved site Clo1313_0905 IPR038380 Ribosomal protein S21 superfamily Clo1313_0907 IPR001667 DDH domain Clo1313_0907 IPR003156 DHHA1 domain Clo1313_0907 IPR038763 DHH phosphoesterase superfamily Clo1313_0907 IPR041122 RecJ, OB domain Clo1313_0907 IPR018779 Single-stranded-DNA-specific exonuclease RecJ, C-terminal Clo1313_0907 IPR004610 Bacterial RecJ exonuclease Clo1313_0908 IPR005764 Adenine phosphoribosyl transferase Clo1313_0908 IPR000836 Phosphoribosyltransferase domain Clo1313_0908 IPR029057 Phosphoribosyltransferase-like Clo1313_0909 IPR002912 ACT domain Clo1313_0909 IPR012675 Beta-grasp domain superfamily Clo1313_0909 IPR003607 HD/PDEase domain Clo1313_0909 IPR004811 RelA/SpoT family Clo1313_0909 IPR007685 RelA/SpoT Clo1313_0909 IPR004095 TGS Clo1313_0909 IPR012676 TGS-like Clo1313_0909 IPR033655 RelA, TGS domain Clo1313_0910 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily Clo1313_0910 IPR003732 D-aminoacyl-tRNA deacylase DTD Clo1313_0911 IPR001279 Metallo-beta-lactamase Clo1313_0911 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Clo1313_0912 IPR034505 Anaerobic coproporphyrinogen-III oxidase Clo1313_0912 IPR006638 Elp3/MiaB/NifB Clo1313_0912 IPR023995 Oxygen-independent coproporphyrinogen-III oxidase-like protein HemZ Clo1313_0912 IPR007197 Radical SAM Clo1313_0912 IPR023404 Radical SAM, alpha/beta horseshoe Clo1313_0914 IPR022399 Helicase/secretion neighbourhood ATPase Clo1313_0914 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_0914 IPR001482 Type II/IV secretion system protein Clo1313_0922 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain Clo1313_0922 IPR006195 Aminoacyl-tRNA synthetase, class II Clo1313_0922 IPR004154 Anticodon-binding Clo1313_0922 IPR036621 Anticodon-binding domain superfamily Clo1313_0922 IPR015807 Histidine-tRNA ligase Clo1313_0922 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit Clo1313_0922 IPR033656 Histidyl-anticodon-binding Clo1313_0923 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type Clo1313_0923 IPR012340 Nucleic acid-binding, OB-fold Clo1313_0923 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb Clo1313_0923 IPR004115 GAD-like domain superfamily Clo1313_0923 IPR004524 Aspartate-tRNA ligase, type 1 Clo1313_0923 IPR006195 Aminoacyl-tRNA synthetase, class II Clo1313_0923 IPR029351 GAD domain Clo1313_0923 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) Clo1313_0924 IPR019756 Peptidase S26A, signal peptidase I, serine active site Clo1313_0924 IPR019533 Peptidase S26 Clo1313_0924 IPR019758 Peptidase S26A, signal peptidase I, conserved site Clo1313_0924 IPR036286 LexA/Signal peptidase-like superfamily Clo1313_0924 IPR019757 Peptidase S26A, signal peptidase I, lysine active site Clo1313_0924 IPR000223 Peptidase S26A, signal peptidase I Clo1313_0929 IPR035647 EF-G domain III/V-like Clo1313_0929 IPR000640 Elongation factor EFG, domain V-like Clo1313_0929 IPR004161 Translation elongation factor EFTu-like, domain 2 Clo1313_0929 IPR031157 Tr-type G domain, conserved site Clo1313_0929 IPR038363 LepA, C-terminal domain superfamily Clo1313_0929 IPR013842 GTP-binding protein LepA, C-terminal Clo1313_0929 IPR035654 Elongation factor 4, domain IV Clo1313_0929 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_0929 IPR005225 Small GTP-binding protein domain Clo1313_0929 IPR000795 Transcription factor, GTP-binding domain Clo1313_0929 IPR009000 Translation protein, beta-barrel domain superfamily Clo1313_0929 IPR006297 Elongation factor 4 Clo1313_0930 IPR004559 Heme chaperone HemW-like Clo1313_0930 IPR007197 Radical SAM Clo1313_0930 IPR023404 Radical SAM, alpha/beta horseshoe Clo1313_0930 IPR010723 HemN, C-terminal Clo1313_0930 IPR006638 Elp3/MiaB/NifB Clo1313_0930 IPR034505 Anaerobic coproporphyrinogen-III oxidase Clo1313_0931 IPR029016 GAF-like domain superfamily Clo1313_0931 IPR002571 Heat-inducible transcription repressor HrcA Clo1313_0931 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal Clo1313_0931 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_0931 IPR036390 Winged helix DNA-binding domain superfamily Clo1313_0931 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily Clo1313_0932 IPR009012 GrpE nucleotide exchange factor, head Clo1313_0932 IPR000740 GrpE nucleotide exchange factor Clo1313_0932 IPR013805 GrpE nucleotide exchange factor, coiled-coil Clo1313_0933 IPR012725 Chaperone DnaK Clo1313_0933 IPR018181 Heat shock protein 70, conserved site Clo1313_0933 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Clo1313_0933 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Clo1313_0933 IPR013126 Heat shock protein 70 family Clo1313_0934 IPR036869 Chaperone J-domain superfamily Clo1313_0934 IPR012724 Chaperone DnaJ Clo1313_0934 IPR002939 Chaperone DnaJ, C-terminal Clo1313_0934 IPR001623 DnaJ domain Clo1313_0934 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily Clo1313_0934 IPR008971 HSP40/DnaJ peptide-binding Clo1313_0934 IPR018253 DnaJ domain, conserved site Clo1313_0934 IPR001305 Heat shock protein DnaJ, cysteine-rich domain Clo1313_0935 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clo1313_0935 IPR004498 Ribosomal protein L11 methyltransferase Clo1313_0936 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Clo1313_0936 IPR006700 Ribosomal RNA small subunit methyltransferase E Clo1313_0936 IPR015947 PUA-like superfamily Clo1313_0936 IPR029028 Alpha/beta knot methyltransferases Clo1313_0937 IPR001789 Signal transduction response regulator, receiver domain Clo1313_0937 IPR011006 CheY-like superfamily Clo1313_0939 IPR005229 Conserved hypothetical protein CHP00255 Clo1313_0939 IPR013551 Domain of unknown function DUF1732 Clo1313_0939 IPR013527 YicC-like, N-terminal Clo1313_0940 IPR007169 Extracellular matrix regulatory protein A Clo1313_0941 IPR020590 Guanylate kinase, conserved site Clo1313_0941 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_0941 IPR017665 Guanylate kinase Clo1313_0941 IPR008144 Guanylate kinase-like domain Clo1313_0941 IPR008145 Guanylate kinase/L-type calcium channel beta subunit Clo1313_0942 IPR012293 RNA polymerase subunit, RPB6/omega Clo1313_0942 IPR003716 DNA-directed RNA polymerase, omega subunit Clo1313_0942 IPR006110 RNA polymerase, subunit omega/K/RPB6 Clo1313_0942 IPR036161 RPB6/omega subunit-like superfamily Clo1313_0943 IPR003382 Flavoprotein Clo1313_0943 IPR036551 Flavin prenyltransferase-like Clo1313_0943 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC Clo1313_0943 IPR035929 CoaB-like superfamily Clo1313_0943 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal Clo1313_0944 IPR027031 Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2 Clo1313_0944 IPR022961 Glycine-tRNA ligase, bacterial Clo1313_0944 IPR036621 Anticodon-binding domain superfamily Clo1313_0944 IPR033731 Glycyl-tRNA synthetase-like core domain Clo1313_0944 IPR002315 Glycyl-tRNA synthetase Clo1313_0944 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) Clo1313_0944 IPR006195 Aminoacyl-tRNA synthetase, class II Clo1313_0944 IPR004154 Anticodon-binding Clo1313_0945 IPR029151 Periplasmic sensor-like domain superfamily Clo1313_0945 IPR033463 Single cache domain 3 Clo1313_0945 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Clo1313_0945 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB Clo1313_0945 IPR039506 SpoOB, alpha-helical domain Clo1313_0945 IPR013767 PAS fold Clo1313_0945 IPR035965 PAS domain superfamily Clo1313_0945 IPR000014 PAS domain Clo1313_0945 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clo1313_0945 IPR003594 Histidine kinase/HSP90-like ATPase Clo1313_0945 IPR005467 Histidine kinase domain Clo1313_0948 IPR030896 Heme b synthase Clo1313_0948 IPR007197 Radical SAM Clo1313_0948 IPR017200 Coenzyme PQQ synthesis protein E Clo1313_0948 IPR006638 Elp3/MiaB/NifB Clo1313_0948 IPR034391 Cmo-like SPASM domain containing Clo1313_0948 IPR013785 Aldolase-type TIM barrel Clo1313_0948 IPR023885 4Fe4S-binding SPASM domain Clo1313_0949 IPR000121 PEP-utilising enzyme, C-terminal Clo1313_0949 IPR018274 PEP-utilising enzyme, active site Clo1313_0949 IPR008279 PEP-utilising enzyme, mobile domain Clo1313_0949 IPR013815 ATP-grasp fold, subdomain 1 Clo1313_0949 IPR023151 PEP-utilising enzyme, conserved site Clo1313_0949 IPR036637 Phosphohistidine domain superfamily Clo1313_0949 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding Clo1313_0949 IPR010121 Pyruvate, phosphate dikinase Clo1313_0949 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily Clo1313_0949 IPR040442 Pyruvate kinase-like domain superfamily Clo1313_0950 IPR017853 Glycoside hydrolase superfamily Clo1313_0950 IPR001119 S-layer homology domain Clo1313_0950 IPR031158 Glycosyl hydrolases family 10, active site Clo1313_0950 IPR008979 Galactose-binding-like domain superfamily Clo1313_0950 IPR001000 Glycoside hydrolase family 10 domain Clo1313_0950 IPR010502 Carbohydrate-binding domain, family 9 Clo1313_0950 IPR003305 Carbohydrate-binding, CenC-like Clo1313_0952 IPR013096 Cupin 2, conserved barrel Clo1313_0952 IPR014710 RmlC-like jelly roll fold Clo1313_0952 IPR011051 RmlC-like cupin domain superfamily Clo1313_0953 IPR029060 PIN-like domain superfamily Clo1313_0953 IPR002716 PIN domain Clo1313_0953 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_0953 IPR003714 PhoH-like protein Clo1313_0954 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Clo1313_0954 IPR001296 Glycosyl transferase, family 1 Clo1313_0955 IPR041636 Ribonuclease J, C-terminal Clo1313_0955 IPR001587 Ribonuclease J, conserved site Clo1313_0955 IPR042173 Ribonuclease J, domain 2 Clo1313_0955 IPR004613 Ribonuclease J Clo1313_0955 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain Clo1313_0955 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Clo1313_0955 IPR030854 Ribonuclease J, bacteria Clo1313_0955 IPR001279 Metallo-beta-lactamase Clo1313_0956 IPR008513 tRNA(Met) cytidine acetate ligase Clo1313_0956 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clo1313_0959 IPR020055 Ribosomal protein L25, short-form Clo1313_0959 IPR037121 Ribosomal protein L25, C-terminal Clo1313_0959 IPR020057 Ribosomal protein L25, beta domain Clo1313_0959 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily Clo1313_0959 IPR029751 Ribosomal protein L25 Clo1313_0959 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Clo1313_0959 IPR001021 Ribosomal protein L25, long-form Clo1313_0960 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like Clo1313_0960 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal Clo1313_0960 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic Clo1313_0960 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily Clo1313_0962 IPR002698 5-formyltetrahydrofolate cyclo-ligase Clo1313_0962 IPR037171 NagB/RpiA transferase-like Clo1313_0962 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily Clo1313_0965 IPR001789 Signal transduction response regulator, receiver domain Clo1313_0965 IPR011006 CheY-like superfamily Clo1313_0965 IPR003607 HD/PDEase domain Clo1313_0965 IPR037522 HD-GYP domain Clo1313_0966 IPR017850 Alkaline-phosphatase-like, core domain superfamily Clo1313_0966 IPR023665 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, prokaryotes Clo1313_0966 IPR006124 Metalloenzyme Clo1313_0966 IPR004456 2,3-bisphosphoglycerate-independent phosphoglycerate mutase Clo1313_0966 IPR042253 2,3-bisphosphoglycerate-independent phosphoglycerate mutase superfamily Clo1313_0970 IPR016032 Signal transduction response regulator, C-terminal effector Clo1313_0970 IPR001867 OmpR/PhoB-type DNA-binding domain Clo1313_0970 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_0970 IPR039420 Transcriptional regulatory protein WalR-like Clo1313_0970 IPR001789 Signal transduction response regulator, receiver domain Clo1313_0970 IPR011006 CheY-like superfamily Clo1313_0971 IPR003594 Histidine kinase/HSP90-like ATPase Clo1313_0971 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Clo1313_0971 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Clo1313_0971 IPR005467 Histidine kinase domain Clo1313_0971 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clo1313_0971 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Clo1313_0971 IPR003660 HAMP domain Clo1313_0972 IPR001478 PDZ domain Clo1313_0972 IPR001940 Peptidase S1C Clo1313_0972 IPR009003 Peptidase S1, PA clan Clo1313_0972 IPR036034 PDZ superfamily Clo1313_0973 IPR003607 HD/PDEase domain Clo1313_0973 IPR006674 HD domain Clo1313_0973 IPR029787 Nucleotide cyclase Clo1313_0973 IPR037522 HD-GYP domain Clo1313_0973 IPR000160 GGDEF domain Clo1313_0974 IPR011835 Bacterial/plant glycogen synthase Clo1313_0974 IPR001296 Glycosyl transferase, family 1 Clo1313_0974 IPR013534 Starch synthase, catalytic domain Clo1313_0975 IPR011257 DNA glycosylase Clo1313_0975 IPR004036 Endonuclease III-like, conserved site-2 Clo1313_0975 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif Clo1313_0975 IPR004035 Endonuclease III, iron-sulphur binding site Clo1313_0975 IPR003265 HhH-GPD domain Clo1313_0975 IPR000445 Helix-hairpin-helix motif Clo1313_0975 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Clo1313_0975 IPR005759 Endonuclease III Clo1313_0976 IPR000160 GGDEF domain Clo1313_0976 IPR029787 Nucleotide cyclase Clo1313_0978 IPR007341 Transglycosylase-associated protein Clo1313_0979 IPR026569 Ribosomal protein L28/L24 Clo1313_0979 IPR037147 Ribosomal protein L28/L24 superfamily Clo1313_0979 IPR034704 L28p-like Clo1313_0979 IPR001383 Ribosomal protein L28 Clo1313_0980 IPR011545 DEAD/DEAH box helicase domain Clo1313_0980 IPR033454 RecG, wedge domain Clo1313_0980 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_0980 IPR012340 Nucleic acid-binding, OB-fold Clo1313_0980 IPR001650 Helicase, C-terminal Clo1313_0980 IPR014001 Helicase superfamily 1/2, ATP-binding domain Clo1313_0980 IPR004609 ATP-dependent DNA helicase RecG Clo1313_0981 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clo1313_0981 IPR004398 RNA methyltransferase, RsmD Clo1313_0982 IPR004821 Cytidyltransferase-like domain Clo1313_0982 IPR001980 Phosphopantetheine adenylyltransferase Clo1313_0982 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clo1313_0984 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Clo1313_0984 IPR014226 Sporulation integral membrane protein YlbJ Clo1313_0985 IPR007934 Alpha-L-arabinofuranosidase B, arabinose-binding domain Clo1313_0985 IPR024449 Anti-sigma factor RsgI, N-terminal Clo1313_0985 IPR036195 Alpha-L-arabinofuranosidase B, arabinose-binding domain superfamily Clo1313_0986 IPR014244 RNA polymerase sigma-I type Clo1313_0986 IPR007627 RNA polymerase sigma-70 region 2 Clo1313_0986 IPR013325 RNA polymerase sigma factor, region 2 Clo1313_0987 IPR005084 Carbohydrate binding module family 6 Clo1313_0987 IPR006584 Cellulose binding, type IV Clo1313_0987 IPR008979 Galactose-binding-like domain superfamily Clo1313_0987 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Clo1313_0987 IPR006710 Glycoside hydrolase, family 43 Clo1313_0990 IPR016381 Signal transduction histidine kinase, DegS Clo1313_0990 IPR005467 Histidine kinase domain Clo1313_0990 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clo1313_0990 IPR003594 Histidine kinase/HSP90-like ATPase Clo1313_0990 IPR008595 Sensor DegS Clo1313_0990 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain Clo1313_0991 IPR000792 Transcription regulator LuxR, C-terminal Clo1313_0991 IPR016032 Signal transduction response regulator, C-terminal effector Clo1313_0991 IPR001789 Signal transduction response regulator, receiver domain Clo1313_0991 IPR011006 CheY-like superfamily Clo1313_0992 IPR003660 HAMP domain Clo1313_0992 IPR033479 Double Cache domain 1 Clo1313_0992 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding Clo1313_0992 IPR029151 Periplasmic sensor-like domain superfamily Clo1313_0992 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Clo1313_0993 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I Clo1313_0993 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III Clo1313_0993 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II Clo1313_0993 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III Clo1313_0993 IPR005843 Alpha-D-phosphohexomutase, C-terminal Clo1313_0993 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily Clo1313_0993 IPR016066 Alpha-D-phosphohexomutase, conserved site Clo1313_0993 IPR005841 Alpha-D-phosphohexomutase superfamily Clo1313_0994 IPR004805 DNA polymerase III, alpha subunit Clo1313_0994 IPR016195 Polymerase/histidinol phosphatase-like Clo1313_0994 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type Clo1313_0994 IPR004013 PHP domain Clo1313_0994 IPR029460 DNA polymerase, helix-hairpin-helix motif Clo1313_0994 IPR040982 DNA polymerase III alpha subunit finger domain Clo1313_0994 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain Clo1313_0994 IPR003141 Polymerase/histidinol phosphatase, N-terminal Clo1313_0994 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain Clo1313_0995 IPR016031 Tryptophan RNA-binding attenuator protein-like domain superfamily Clo1313_0995 IPR023558 Tryptophan RNA-binding attenuator protein domain Clo1313_0995 IPR000824 Transcription attenuation protein MtrB Clo1313_0997 IPR022953 ATP-dependent 6-phosphofructokinase Clo1313_0997 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic Clo1313_0997 IPR015912 Phosphofructokinase, conserved site Clo1313_0997 IPR000023 Phosphofructokinase domain Clo1313_0997 IPR035966 Phosphofructokinase superfamily Clo1313_0997 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type Clo1313_0999 IPR000462 CDP-alcohol phosphatidyltransferase Clo1313_0999 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase Clo1313_1002 IPR019800 Glycoside hydrolase, family 3, active site Clo1313_1002 IPR002772 Glycoside hydrolase family 3 C-terminal domain Clo1313_1002 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily Clo1313_1002 IPR001764 Glycoside hydrolase, family 3, N-terminal Clo1313_1002 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily Clo1313_1002 IPR013783 Immunoglobulin-like fold Clo1313_1002 IPR017853 Glycoside hydrolase superfamily Clo1313_1002 IPR026891 Fibronectin type III-like domain Clo1313_1007 IPR006043 Xanthine/uracil/vitamin C permease Clo1313_1007 IPR026033 Azaguanine-like transporters Clo1313_1008 IPR033747 Class I PurE Clo1313_1008 IPR035893 PurE domain superfamily Clo1313_1008 IPR000031 PurE domain Clo1313_1008 IPR024694 PurE, prokaryotic type Clo1313_1009 IPR017932 Glutamine amidotransferase type 2 domain Clo1313_1009 IPR029057 Phosphoribosyltransferase-like Clo1313_1009 IPR029055 Nucleophile aminohydrolases, N-terminal Clo1313_1009 IPR035584 Amidophosphoribosyltransferase, N-terminal Clo1313_1009 IPR005854 Amidophosphoribosyltransferase Clo1313_1009 IPR000836 Phosphoribosyltransferase domain Clo1313_1010 IPR016188 PurM-like, N-terminal domain Clo1313_1010 IPR036921 PurM-like, N-terminal domain superfamily Clo1313_1010 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase Clo1313_1010 IPR010918 PurM-like, C-terminal domain Clo1313_1010 IPR036676 PurM-like, C-terminal domain superfamily Clo1313_1011 IPR001555 Phosphoribosylglycinamide formyltransferase, active site Clo1313_1011 IPR004607 Phosphoribosylglycinamide formyltransferase Clo1313_1011 IPR002376 Formyl transferase, N-terminal Clo1313_1011 IPR036477 Formyl transferase, N-terminal domain superfamily Clo1313_1012 IPR024051 AICAR transformylase, duplicated domain superfamily Clo1313_1012 IPR011607 Methylglyoxal synthase-like domain Clo1313_1012 IPR036914 Methylglyoxal synthase-like domain superfamily Clo1313_1012 IPR002695 Bifunctional purine biosynthesis protein PurH-like Clo1313_1012 IPR016193 Cytidine deaminase-like Clo1313_1013 IPR020559 Phosphoribosylglycinamide synthetase, conserved site Clo1313_1013 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal Clo1313_1013 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily Clo1313_1013 IPR011761 ATP-grasp fold Clo1313_1013 IPR013815 ATP-grasp fold, subdomain 1 Clo1313_1013 IPR016185 Pre-ATP-grasp domain superfamily Clo1313_1013 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Clo1313_1013 IPR011054 Rudiment single hybrid motif Clo1313_1013 IPR000115 Phosphoribosylglycinamide synthetase Clo1313_1013 IPR020560 Phosphoribosylglycinamide synthetase, C-domain Clo1313_1014 IPR001173 Glycosyltransferase 2-like Clo1313_1014 IPR029044 Nucleotide-diphospho-sugar transferases Clo1313_1016 IPR004821 Cytidyltransferase-like domain Clo1313_1016 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase Clo1313_1016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clo1313_1017 IPR005249 Conserved hypothetical protein CHP00488 Clo1313_1017 IPR003607 HD/PDEase domain Clo1313_1017 IPR006674 HD domain Clo1313_1019 IPR004394 Protein Iojap/ribosomal silencing factor RsfS Clo1313_1020 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site Clo1313_1020 IPR002300 Aminoacyl-tRNA synthetase, class Ia Clo1313_1020 IPR015413 Methionyl/Leucyl tRNA synthetase Clo1313_1020 IPR025709 Leucyl-tRNA synthetase, editing domain Clo1313_1020 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain Clo1313_1020 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding Clo1313_1020 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clo1313_1020 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding Clo1313_1020 IPR002302 Leucine-tRNA ligase Clo1313_1021 IPR011583 Chitinase II Clo1313_1021 IPR029070 Chitinase insertion domain superfamily Clo1313_1021 IPR003610 Carbohydrate-binding module family 5/12 Clo1313_1021 IPR003961 Fibronectin type III Clo1313_1021 IPR036116 Fibronectin type III superfamily Clo1313_1021 IPR001223 Glycoside hydrolase family 18, catalytic domain Clo1313_1021 IPR001579 Glycoside hydrolase, chitinase active site Clo1313_1021 IPR017853 Glycoside hydrolase superfamily Clo1313_1021 IPR013783 Immunoglobulin-like fold Clo1313_1021 IPR036573 Carbohydrate-binding module superfamily 5/12 Clo1313_1022 IPR004090 Chemotaxis methyl-accepting receptor Clo1313_1022 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Clo1313_1022 IPR003660 HAMP domain Clo1313_1022 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain Clo1313_1024 IPR042099 AMP-dependent synthetase-like superfamily Clo1313_1024 IPR000873 AMP-dependent synthetase/ligase Clo1313_1024 IPR020845 AMP-binding, conserved site Clo1313_1025 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal Clo1313_1025 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal Clo1313_1025 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A Clo1313_1025 IPR012338 Beta-lactamase/transpeptidase-like Clo1313_1026 IPR010994 RuvA domain 2-like Clo1313_1026 IPR019554 Soluble ligand binding domain Clo1313_1026 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 Clo1313_1026 IPR004509 Competence protein ComEA, helix-hairpin-helix domain Clo1313_1026 IPR004787 Competence protein ComEA Clo1313_1029 IPR004154 Anticodon-binding Clo1313_1029 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) Clo1313_1029 IPR012947 Threonyl/alanyl tRNA synthetase, SAD Clo1313_1029 IPR033728 Threonine-tRNA ligase catalytic core domain Clo1313_1029 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily Clo1313_1029 IPR002320 Threonine-tRNA ligase, class IIa Clo1313_1029 IPR012676 TGS-like Clo1313_1029 IPR004095 TGS Clo1313_1029 IPR012675 Beta-grasp domain superfamily Clo1313_1029 IPR006195 Aminoacyl-tRNA synthetase, class II Clo1313_1029 IPR036621 Anticodon-binding domain superfamily Clo1313_1030 IPR000398 Thymidylate synthase Clo1313_1030 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily Clo1313_1030 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain Clo1313_1030 IPR020940 Thymidylate synthase, active site Clo1313_1031 IPR024072 Dihydrofolate reductase-like domain superfamily Clo1313_1031 IPR017925 Dihydrofolate reductase conserved site Clo1313_1031 IPR012259 Dihydrofolate reductase Clo1313_1031 IPR001796 Dihydrofolate reductase domain Clo1313_1032 IPR019814 Translation initiation factor 3, N-terminal Clo1313_1032 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily Clo1313_1032 IPR019813 Translation initiation factor 3, conserved site Clo1313_1032 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily Clo1313_1032 IPR001288 Translation initiation factor 3 Clo1313_1032 IPR019815 Translation initiation factor 3, C-terminal Clo1313_1033 IPR037229 Ribosomal protein L35 superfamily Clo1313_1033 IPR021137 Ribosomal protein L35 Clo1313_1033 IPR018265 Ribosomal protein L35, conserved site Clo1313_1033 IPR001706 Ribosomal protein L35, non-mitochondrial Clo1313_1034 IPR005813 Ribosomal protein L20 Clo1313_1034 IPR035566 Ribosomal protein L20, C-terminal Clo1313_1035 IPR029064 50S ribosomal protein L30e-like Clo1313_1035 IPR004441 RNA methyltransferase TrmH family Clo1313_1035 IPR001537 tRNA/rRNA methyltransferase, SpoU type Clo1313_1035 IPR013123 RNA 2-O ribose methyltransferase, substrate binding Clo1313_1035 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Clo1313_1035 IPR029028 Alpha/beta knot methyltransferases Clo1313_1036 IPR012341 Six-hairpin glycosidase-like superfamily Clo1313_1036 IPR010383 Glycosyl hydrolase 94 Clo1313_1036 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily Clo1313_1036 IPR008928 Six-hairpin glycosidase superfamily Clo1313_1036 IPR037824 NdvB, GH94N domain 2 Clo1313_1036 IPR033432 Glycosyl hydrolase 36, catalytic domain Clo1313_1036 IPR011013 Galactose mutarotase-like domain superfamily Clo1313_1036 IPR019282 Domain of unknown function DUF2329 Clo1313_1036 IPR009342 Putative carbohydrate binding domain Clo1313_1036 IPR037820 NdvB, GH94N domain 1 Clo1313_1039 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase Clo1313_1039 IPR016181 Acyl-CoA N-acyltransferase Clo1313_1039 IPR042203 Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal Clo1313_1040 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_1040 IPR028299 ClpA/B, conserved site 2 Clo1313_1040 IPR003593 AAA+ ATPase domain Clo1313_1040 IPR003959 ATPase, AAA-type, core Clo1313_1040 IPR019489 Clp ATPase, C-terminal Clo1313_1040 IPR036628 Clp, N-terminal domain superfamily Clo1313_1040 IPR004176 Clp, N-terminal Clo1313_1040 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA Clo1313_1040 IPR001270 ClpA/B family Clo1313_1040 IPR018368 ClpA/B, conserved site 1 Clo1313_1040 IPR041546 ClpA/ClpB, AAA lid domain Clo1313_1041 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Clo1313_1041 IPR022935 ATP-dependent Clp protease adaptor protein ClpS Clo1313_1041 IPR003769 Adaptor protein ClpS, core Clo1313_1042 IPR002781 Transmembrane protein TauE-like Clo1313_1043 IPR002781 Transmembrane protein TauE-like Clo1313_1046 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Clo1313_1046 IPR023026 Tryptophan synthase beta chain/beta chain-like Clo1313_1046 IPR006654 Tryptophan synthase, beta chain Clo1313_1046 IPR001926 Pyridoxal-phosphate dependent enzyme Clo1313_1046 IPR006653 Tryptophan synthase, beta chain, conserved site Clo1313_1046 IPR006316 Tryptophan synthase, beta chain-like Clo1313_1052 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_1052 IPR013153 PrkA AAA domain Clo1313_1052 IPR010650 PrkA C-terminal domain Clo1313_1052 IPR016230 Serine-protein kinase, PrkA Clo1313_1053 IPR036465 von Willebrand factor A-like domain superfamily Clo1313_1053 IPR014230 Sporulation protein YhbH Clo1313_1053 IPR006698 Uncharacterised protein family UPF0229 Clo1313_1054 IPR007390 Sporulation stage V, protein R Clo1313_1056 IPR000845 Nucleoside phosphorylase domain Clo1313_1056 IPR018099 Purine phosphorylase, family 2, conserved site Clo1313_1056 IPR011268 Purine nucleoside phosphorylase Clo1313_1056 IPR035994 Nucleoside phosphorylase superfamily Clo1313_1056 IPR011270 Purine nucleoside phosphorylase I, inosine/guanosine-specific Clo1313_1057 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site Clo1313_1057 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Clo1313_1057 IPR000043 Adenosylhomocysteinase-like Clo1313_1057 IPR042172 Adenosylhomocysteinase-like superfamily Clo1313_1057 IPR036291 NAD(P)-binding domain superfamily Clo1313_1058 IPR011059 Metal-dependent hydrolase, composite domain superfamily Clo1313_1058 IPR023512 Deaminase MtaD/DadD Clo1313_1058 IPR006680 Amidohydrolase-related Clo1313_1058 IPR032466 Metal-dependent hydrolase Clo1313_1066 IPR001207 Transposase, mutator type Clo1313_1068 IPR023214 HAD superfamily Clo1313_1068 IPR041492 Haloacid dehalogenase-like hydrolase Clo1313_1068 IPR006439 HAD hydrolase, subfamily IA Clo1313_1068 IPR036412 HAD-like superfamily Clo1313_1068 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Clo1313_1070 IPR003439 ABC transporter-like Clo1313_1070 IPR017871 ABC transporter, conserved site Clo1313_1070 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_1070 IPR003593 AAA+ ATPase domain Clo1313_1073 IPR029058 Alpha/Beta hydrolase fold Clo1313_1073 IPR013094 Alpha/beta hydrolase fold-3 Clo1313_1073 IPR002168 Lipase, GDXG, putative histidine active site Clo1313_1073 IPR033140 Lipase, GDXG, putative serine active site Clo1313_1076 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_1076 IPR041628 ChlI/MoxR, AAA lid domain Clo1313_1076 IPR011703 ATPase, AAA-3 Clo1313_1078 IPR038765 Papain-like cysteine peptidase superfamily Clo1313_1078 IPR002931 Transglutaminase-like Clo1313_1078 IPR025403 Domain of unknown function DUF4129 Clo1313_1078 IPR021878 Protein-glutamine gamma-glutamyltransferase TgpA, N-terminal Clo1313_1080 IPR012610 Small acid-soluble spore protein, SspH Clo1313_1082 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase Clo1313_1082 IPR006405 Nicotinate phosphoribosyltransferase pncB-type Clo1313_1082 IPR007229 Nicotinate phosphoribosyltransferase family Clo1313_1082 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal Clo1313_1082 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain Clo1313_1082 IPR041619 Nicotinate phosphoribosyltransferase C-terminal domain Clo1313_1082 IPR013785 Aldolase-type TIM barrel Clo1313_1083 IPR038756 CheY-P phosphatase CheX-like Clo1313_1083 IPR028976 CheC-like superfamily Clo1313_1083 IPR028051 Chemotaxis phosphatase CheX-like domain Clo1313_1090 IPR000846 Dihydrodipicolinate reductase, N-terminal Clo1313_1090 IPR022663 Dihydrodipicolinate reductase, C-terminal Clo1313_1090 IPR036291 NAD(P)-binding domain superfamily Clo1313_1090 IPR023940 Dihydrodipicolinate reductase Clo1313_1090 IPR022664 Dihydrodipicolinate reductase, conserved site Clo1313_1093 IPR027485 AMMECR1, N-terminal Clo1313_1093 IPR027623 AmmeMemoRadiSam system protein A Clo1313_1093 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B Clo1313_1093 IPR023472 Uncharacterised protein family MJ0810 Clo1313_1093 IPR023473 AMMECR1 Clo1313_1093 IPR036071 AMMECR1 domain superfamily Clo1313_1093 IPR002733 AMMECR1 domain Clo1313_1095 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily Clo1313_1095 IPR014046 Diadenylate cyclase Clo1313_1095 IPR034701 Diadenylate cyclase CdaA Clo1313_1095 IPR003390 DNA integrity scanning protein, DisA, N-terminal Clo1313_1097 IPR028348 FAD dependent protein Clo1313_1097 IPR036188 FAD/NAD(P)-binding domain superfamily Clo1313_1098 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily Clo1313_1098 IPR006352 Phosphoglucosamine mutase, bacterial type Clo1313_1098 IPR005841 Alpha-D-phosphohexomutase superfamily Clo1313_1098 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I Clo1313_1098 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III Clo1313_1098 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II Clo1313_1098 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III Clo1313_1098 IPR005843 Alpha-D-phosphohexomutase, C-terminal Clo1313_1098 IPR016066 Alpha-D-phosphohexomutase, conserved site Clo1313_1099 IPR017932 Glutamine amidotransferase type 2 domain Clo1313_1099 IPR035466 GlmS/AgaS, SIS domain 1 Clo1313_1099 IPR035490 GlmS/FrlB, SIS domain 2 Clo1313_1099 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising Clo1313_1099 IPR029055 Nucleophile aminohydrolases, N-terminal Clo1313_1099 IPR001347 Sugar isomerase (SIS) Clo1313_1100 IPR018334 ArsR-type transcription regulator, HTH motif Clo1313_1100 IPR036390 Winged helix DNA-binding domain superfamily Clo1313_1100 IPR001845 HTH ArsR-type DNA-binding domain Clo1313_1100 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_1100 IPR011991 ArsR-like helix-turn-helix domain Clo1313_1101 IPR004706 Arsenical-resistance protein Acr3 Clo1313_1101 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 Clo1313_1101 IPR038770 Sodium/solute symporter superfamily Clo1313_1102 IPR023485 Phosphotyrosine protein phosphatase I Clo1313_1102 IPR036196 Phosphotyrosine protein phosphatase I superfamily Clo1313_1102 IPR014064 Arsenate reductase ArsC Clo1313_1106 IPR042181 Type II secretion system, protein E, N-terminal Clo1313_1106 IPR007831 General secretory system II, protein E, N-terminal Clo1313_1106 IPR037257 General secretory system II, protein E, N-terminal superfamily Clo1313_1106 IPR001482 Type II/IV secretion system protein Clo1313_1106 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_1106 IPR013374 ATPase, type IV, pilus assembly, PilB Clo1313_1106 IPR003593 AAA+ ATPase domain Clo1313_1107 IPR001482 Type II/IV secretion system protein Clo1313_1107 IPR003593 AAA+ ATPase domain Clo1313_1107 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_1107 IPR006321 Pilus retraction protein PilT Clo1313_1108 IPR018076 Type II secretion system F domain Clo1313_1108 IPR042094 Type II secretion system F domain superfamily Clo1313_1108 IPR001992 Type II secretion system conserved site Clo1313_1108 IPR003004 GspF/PilC family Clo1313_1109 IPR000983 Bacterial general secretion pathway protein G-type pilin Clo1313_1109 IPR012902 Prokaryotic N-terminal methylation site Clo1313_1109 IPR001082 Fimbrial protein pilin Clo1313_1116 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA Clo1313_1116 IPR029045 ClpP/crotonase-like domain superfamily Clo1313_1118 IPR041027 FtsK alpha domain Clo1313_1118 IPR002543 FtsK domain Clo1313_1118 IPR018541 FtsK gamma domain Clo1313_1118 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_1118 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_1118 IPR036390 Winged helix DNA-binding domain superfamily Clo1313_1119 IPR013704 Uncharacterised protein family UPF0313, N-terminal Clo1313_1119 IPR024560 Uncharacterised protein family UPF0313, C-terminal Clo1313_1119 IPR022946 Uncharacterised protein family UPF0313 Clo1313_1119 IPR023404 Radical SAM, alpha/beta horseshoe Clo1313_1119 IPR007197 Radical SAM Clo1313_1119 IPR006638 Elp3/MiaB/NifB Clo1313_1120 IPR036291 NAD(P)-binding domain superfamily Clo1313_1120 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase Clo1313_1120 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Clo1313_1120 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site Clo1313_1120 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Clo1313_1122 IPR022711 Ribonuclease Y, N-terminal Clo1313_1122 IPR036612 K Homology domain, type 1 superfamily Clo1313_1122 IPR004088 K Homology domain, type 1 Clo1313_1122 IPR004087 K Homology domain Clo1313_1122 IPR017705 Ribonuclease Y Clo1313_1122 IPR006674 HD domain Clo1313_1122 IPR003607 HD/PDEase domain Clo1313_1122 IPR006675 HDIG domain Clo1313_1123 IPR029052 Metallo-dependent phosphatase-like Clo1313_1123 IPR005235 Metallophosphoesterase, YmdB-like Clo1313_1124 IPR036882 Alba-like domain superfamily Clo1313_1124 IPR007347 Sporulation stage V, protein S Clo1313_1127 IPR036291 NAD(P)-binding domain superfamily Clo1313_1127 IPR016040 NAD(P)-binding domain Clo1313_1127 IPR005888 dTDP-glucose 4,6-dehydratase Clo1313_1128 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Clo1313_1128 IPR001296 Glycosyl transferase, family 1 Clo1313_1130 IPR002575 Aminoglycoside phosphotransferase Clo1313_1130 IPR014255 Spore coat protein CotS Clo1313_1130 IPR011009 Protein kinase-like domain superfamily Clo1313_1134 IPR029044 Nucleotide-diphospho-sugar transferases Clo1313_1134 IPR005835 Nucleotidyl transferase domain Clo1313_1134 IPR037538 UTP--glucose-1-phosphate uridylyltransferase, cyanobacteria Clo1313_1138 IPR010273 Protein of unknown function DUF881 Clo1313_1139 IPR014235 Peptidoglycan-N-acetylmuramic acid deacetylase PdaA Clo1313_1139 IPR002509 NodB homology domain Clo1313_1139 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel Clo1313_1140 IPR022476 Sporulation protein YabP/YqfC Clo1313_1140 IPR022477 Sporulation protein YqfC Clo1313_1142 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_1142 IPR003714 PhoH-like protein Clo1313_1143 IPR003607 HD/PDEase domain Clo1313_1143 IPR006675 HDIG domain Clo1313_1143 IPR006674 HD domain Clo1313_1143 IPR011624 Metal-dependent phosphohydrolase, 7TM extracellular domain Clo1313_1143 IPR011621 Metal-dependent phosphohydrolase, 7TM intracellular domain Clo1313_1144 IPR002036 Endoribonuclease YbeY Clo1313_1144 IPR023091 Metalloprotease catalytic domain superfamily, predicted Clo1313_1145 IPR016192 APOBEC/CMP deaminase, zinc-binding Clo1313_1145 IPR002125 Cytidine and deoxycytidylate deaminase domain Clo1313_1145 IPR006262 Cytidine deaminase, homotetrameric Clo1313_1145 IPR016193 Cytidine deaminase-like Clo1313_1146 IPR030388 Era-type guanine nucleotide-binding (G) domain Clo1313_1146 IPR005662 GTP-binding protein Era Clo1313_1146 IPR006073 GTP binding domain Clo1313_1146 IPR005225 Small GTP-binding protein domain Clo1313_1146 IPR004044 K Homology domain, type 2 Clo1313_1146 IPR015946 K homology domain-like, alpha/beta Clo1313_1146 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_1146 IPR009019 K homology domain superfamily, prokaryotic type Clo1313_1148 IPR042242 Recombination protein O, zinc-binding domain Clo1313_1148 IPR037278 ARFGAP/RecO-like zinc finger Clo1313_1148 IPR022572 DNA replication/recombination mediator RecO, N-terminal Clo1313_1148 IPR012340 Nucleic acid-binding, OB-fold Clo1313_1148 IPR003717 Recombination protein O, RecO Clo1313_1150 IPR016454 Cysteine desulfurase Clo1313_1150 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site Clo1313_1150 IPR000192 Aminotransferase class V domain Clo1313_1150 IPR015424 Pyridoxal phosphate-dependent transferase Clo1313_1150 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Clo1313_1150 IPR017772 Cysteine desulfurase NifS, bacterial/archaeal Clo1313_1150 IPR010240 Cysteine desulfurase IscS Clo1313_1150 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Clo1313_1151 IPR020536 Thil, AANH domain Clo1313_1151 IPR004114 THUMP domain Clo1313_1151 IPR003720 tRNA sulfurtransferase ThiI Clo1313_1151 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clo1313_1152 IPR007391 Vancomycin resistance VanW Clo1313_1155 IPR001085 Serine hydroxymethyltransferase Clo1313_1155 IPR039429 Serine hydroxymethyltransferase-like domain Clo1313_1155 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site Clo1313_1155 IPR015424 Pyridoxal phosphate-dependent transferase Clo1313_1155 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Clo1313_1155 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Clo1313_1156 IPR007168 Phage shock protein, PspC, N-terminal Clo1313_1157 IPR002931 Transglutaminase-like Clo1313_1157 IPR025403 Domain of unknown function DUF4129 Clo1313_1157 IPR038765 Papain-like cysteine peptidase superfamily Clo1313_1157 IPR021878 Protein-glutamine gamma-glutamyltransferase TgpA, N-terminal Clo1313_1159 IPR041628 ChlI/MoxR, AAA lid domain Clo1313_1159 IPR011703 ATPase, AAA-3 Clo1313_1159 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_1160 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal Clo1313_1160 IPR022383 Lactate/malate dehydrogenase, C-terminal Clo1313_1160 IPR001557 L-lactate/malate dehydrogenase Clo1313_1160 IPR011304 L-lactate dehydrogenase Clo1313_1160 IPR018177 L-lactate dehydrogenase, active site Clo1313_1160 IPR001236 Lactate/malate dehydrogenase, N-terminal Clo1313_1160 IPR036291 NAD(P)-binding domain superfamily Clo1313_1161 IPR041424 CinA, KH domain Clo1313_1161 IPR008135 Competence-induced protein CinA Clo1313_1161 IPR036425 MoaB/Mog-like domain superfamily Clo1313_1161 IPR001453 MoaB/Mog domain Clo1313_1161 IPR036653 CinA-like, C-terminal Clo1313_1161 IPR008136 CinA, C-terminal Clo1313_1162 IPR004268 Peptidoglycan biosynthesis protein MurJ Clo1313_1163 IPR003593 AAA+ ATPase domain Clo1313_1163 IPR013765 DNA recombination and repair protein RecA Clo1313_1163 IPR020584 DNA recombination/repair protein RecA, conserved site Clo1313_1163 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain Clo1313_1163 IPR023400 DNA recombination and repair protein RecA, C-terminal Clo1313_1163 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface Clo1313_1163 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_1164 IPR003783 Regulatory protein RecX Clo1313_1164 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_1165 IPR035952 Rhomboid-like superfamily Clo1313_1165 IPR013026 Tetratricopeptide repeat-containing domain Clo1313_1165 IPR011990 Tetratricopeptide-like helical domain superfamily Clo1313_1165 IPR019734 Tetratricopeptide repeat Clo1313_1165 IPR022764 Peptidase S54, rhomboid domain Clo1313_1172 IPR036565 Mur-like, catalytic domain superfamily Clo1313_1172 IPR036615 Mur ligase, C-terminal domain superfamily Clo1313_1172 IPR013221 Mur ligase, central Clo1313_1172 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase Clo1313_1173 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_1173 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal Clo1313_1173 IPR010372 DNA polymerase III delta, N-terminal Clo1313_1173 IPR005790 DNA polymerase III, delta subunit Clo1313_1174 IPR002583 Ribosomal protein S20 Clo1313_1174 IPR036510 Ribosomal protein S20 superfamily Clo1313_1175 IPR023430 Peptidase HybD-like domain superfamily Clo1313_1175 IPR005080 Peptidase A25, germination protease Clo1313_1176 IPR021731 AMIN domain Clo1313_1176 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain Clo1313_1178 IPR036420 BRCT domain superfamily Clo1313_1178 IPR018239 NAD-dependent DNA ligase, active site Clo1313_1178 IPR001357 BRCT domain Clo1313_1178 IPR041663 DisA/LigA, helix-hairpin-helix motif Clo1313_1178 IPR001679 NAD-dependent DNA ligase Clo1313_1178 IPR012340 Nucleic acid-binding, OB-fold Clo1313_1178 IPR013840 NAD-dependent DNA ligase, N-terminal Clo1313_1178 IPR013839 NAD-dependent DNA ligase, adenylation Clo1313_1178 IPR004150 NAD-dependent DNA ligase, OB-fold Clo1313_1178 IPR010994 RuvA domain 2-like Clo1313_1178 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type Clo1313_1178 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 Clo1313_1181 IPR003837 Glu-tRNAGln amidotransferase C subunit Clo1313_1181 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C Clo1313_1182 IPR000120 Amidase Clo1313_1182 IPR020556 Amidase, conserved site Clo1313_1182 IPR023631 Amidase signature domain Clo1313_1182 IPR036928 Amidase signature (AS) superfamily Clo1313_1182 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit Clo1313_1183 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit Clo1313_1183 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic Clo1313_1183 IPR018027 Asn/Gln amidotransferase Clo1313_1183 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like Clo1313_1183 IPR042114 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 1 Clo1313_1183 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 Clo1313_1183 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site Clo1313_1183 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain Clo1313_1183 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E Clo1313_1185 IPR012147 Phosphate acetyl/butyryltransferase Clo1313_1185 IPR004614 Phosphate acetyltransferase Clo1313_1185 IPR042113 Phosphate acetyltransferase, domain 1 Clo1313_1185 IPR042112 Phosphate acetyltransferase, domain 2 Clo1313_1185 IPR002505 Phosphate acetyl/butaryl transferase Clo1313_1186 IPR023865 Aliphatic acid kinase, short-chain, conserved site Clo1313_1186 IPR000890 Aliphatic acid kinase, short-chain Clo1313_1186 IPR004372 Acetate/propionate kinase Clo1313_1188 IPR002677 Ribosomal protein L32p Clo1313_1188 IPR011332 Zinc-binding ribosomal protein Clo1313_1190 IPR005225 Small GTP-binding protein domain Clo1313_1190 IPR031166 EngA-type guanine nucleotide-binding (G) domain Clo1313_1190 IPR016484 GTP-binding protein EngA Clo1313_1190 IPR006073 GTP binding domain Clo1313_1190 IPR032859 GTPase Der, C-terminal KH-domain-like Clo1313_1190 IPR015946 K homology domain-like, alpha/beta Clo1313_1190 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_1191 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY Clo1313_1192 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal Clo1313_1192 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily Clo1313_1192 IPR013328 6-phosphogluconate dehydrogenase, domain 2 Clo1313_1192 IPR036291 NAD(P)-binding domain superfamily Clo1313_1192 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent Clo1313_1192 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal Clo1313_1193 IPR014201 Sporulation stage IV, protein A Clo1313_1193 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_1194 IPR006061 Solute-binding family 1, conserved site Clo1313_1194 IPR006059 Bacterial extracellular solute-binding protein Clo1313_1195 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Clo1313_1195 IPR035906 MetI-like superfamily Clo1313_1196 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Clo1313_1196 IPR035906 MetI-like superfamily Clo1313_1198 IPR007253 Putative cell wall binding repeat 2 Clo1313_1198 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain Clo1313_1201 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_1201 IPR000432 DNA mismatch repair protein MutS, C-terminal Clo1313_1201 IPR007696 DNA mismatch repair protein MutS, core Clo1313_1201 IPR036187 DNA mismatch repair protein MutS, core domain superfamily Clo1313_1201 IPR005747 Endonuclease MutS2 Clo1313_1201 IPR002625 Smr domain Clo1313_1201 IPR036063 Smr domain superfamily Clo1313_1202 IPR014227 Putative transport protein YtvI-like Clo1313_1202 IPR002549 Transmembrane protein TqsA-like Clo1313_1203 IPR013325 RNA polymerase sigma factor, region 2 Clo1313_1203 IPR007630 RNA polymerase sigma-70 region 4 Clo1313_1203 IPR007627 RNA polymerase sigma-70 region 2 Clo1313_1203 IPR014209 RNA polymerase sigma-K type Clo1313_1203 IPR014284 RNA polymerase sigma-70 like domain Clo1313_1203 IPR013324 RNA polymerase sigma factor, region 3/4-like Clo1313_1203 IPR000943 RNA polymerase sigma-70 Clo1313_1203 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_1204 IPR001460 Penicillin-binding protein, transpeptidase Clo1313_1204 IPR036138 Penicillin-binding protein, dimerisation domain superfamily Clo1313_1204 IPR012338 Beta-lactamase/transpeptidase-like Clo1313_1204 IPR005311 Penicillin-binding protein, dimerisation domain Clo1313_1205 IPR001539 Peptidase U32 Clo1313_1205 IPR032525 Peptidase family U32, C-terminal Clo1313_1206 IPR002935 Class I-like SAM-dependent O-methyltransferase Clo1313_1206 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clo1313_1207 IPR003770 Endolytic murein transglycosylase Clo1313_1208 IPR000795 Transcription factor, GTP-binding domain Clo1313_1208 IPR009000 Translation protein, beta-barrel domain superfamily Clo1313_1208 IPR042116 GTP-binding protein TypA/BipA, C-terminal Clo1313_1208 IPR006298 GTP-binding protein TypA Clo1313_1208 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_1208 IPR005225 Small GTP-binding protein domain Clo1313_1208 IPR004161 Translation elongation factor EFTu-like, domain 2 Clo1313_1208 IPR000640 Elongation factor EFG, domain V-like Clo1313_1208 IPR035647 EF-G domain III/V-like Clo1313_1208 IPR041095 Elongation Factor G, domain II Clo1313_1208 IPR035651 BipA, domain V Clo1313_1208 IPR031157 Tr-type G domain, conserved site Clo1313_1209 IPR018130 Ribosomal protein S2, conserved site Clo1313_1209 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid Clo1313_1209 IPR001865 Ribosomal protein S2 Clo1313_1209 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily Clo1313_1210 IPR018101 Translation elongation factor Ts, conserved site Clo1313_1210 IPR036402 Elongation factor Ts, dimerisation domain superfamily Clo1313_1210 IPR001816 Translation elongation factor EFTs/EF1B Clo1313_1210 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation Clo1313_1210 IPR009060 UBA-like superfamily Clo1313_1211 IPR036393 Acetylglutamate kinase-like superfamily Clo1313_1211 IPR001048 Aspartate/glutamate/uridylate kinase Clo1313_1211 IPR011817 Uridylate kinase Clo1313_1211 IPR015963 Uridylate kinase, bacteria Clo1313_1212 IPR036191 RRF superfamily Clo1313_1212 IPR002661 Ribosome recycling factor Clo1313_1212 IPR023584 Ribosome recycling factor domain Clo1313_1214 IPR036424 Decaprenyl diphosphate synthase-like superfamily Clo1313_1214 IPR001441 Decaprenyl diphosphate synthase-like Clo1313_1214 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site Clo1313_1215 IPR000374 Phosphatidate cytidylyltransferase Clo1313_1216 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase Clo1313_1216 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal Clo1313_1216 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal Clo1313_1216 IPR026877 DXP reductoisomerase C-terminal domain Clo1313_1216 IPR036169 DXP reductoisomerase, C-terminal domain superfamily Clo1313_1216 IPR036291 NAD(P)-binding domain superfamily Clo1313_1217 IPR008915 Peptidase M50 Clo1313_1217 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase Clo1313_1217 IPR036034 PDZ superfamily Clo1313_1217 IPR001478 PDZ domain Clo1313_1218 IPR011005 Dihydropteroate synthase-like Clo1313_1218 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial Clo1313_1218 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type Clo1313_1219 IPR024754 DNA polymerase III polC-like, N-terminal domain II Clo1313_1219 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain Clo1313_1219 IPR040982 DNA polymerase III alpha subunit finger domain Clo1313_1219 IPR029460 DNA polymerase, helix-hairpin-helix motif Clo1313_1219 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain Clo1313_1219 IPR012340 Nucleic acid-binding, OB-fold Clo1313_1219 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type Clo1313_1219 IPR004013 PHP domain Clo1313_1219 IPR003141 Polymerase/histidinol phosphatase, N-terminal Clo1313_1219 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type Clo1313_1219 IPR012337 Ribonuclease H-like superfamily Clo1313_1219 IPR036397 Ribonuclease H superfamily Clo1313_1219 IPR013520 Exonuclease, RNase T/DNA polymerase III Clo1313_1221 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily Clo1313_1221 IPR003728 Ribosome maturation factor RimP Clo1313_1221 IPR028998 Ribosome maturation factor RimP, C-terminal Clo1313_1221 IPR028989 Ribosome maturation factor RimP, N-terminal Clo1313_1221 IPR035956 RimP, N-terminal domain superfamily Clo1313_1222 IPR010213 Transcription termination factor NusA Clo1313_1222 IPR013735 Transcription factor NusA, N-terminal Clo1313_1222 IPR003029 S1 domain Clo1313_1222 IPR022967 RNA-binding domain, S1 Clo1313_1222 IPR025249 KH domain, NusA-like Clo1313_1222 IPR009019 K homology domain superfamily, prokaryotic type Clo1313_1222 IPR012340 Nucleic acid-binding, OB-fold Clo1313_1222 IPR030842 Transcription termination/antitermination protein NusA, bacterial Clo1313_1222 IPR036555 NusA, N-terminal domain superfamily Clo1313_1222 IPR004087 K Homology domain Clo1313_1222 IPR015946 K homology domain-like, alpha/beta Clo1313_1223 IPR007393 Domain of unknown function DUF448 Clo1313_1223 IPR037465 Uncharacterized protein YlxR Clo1313_1223 IPR035931 YlxR-like superfamily Clo1313_1224 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 Clo1313_1224 IPR039109 Ribosomal protein L30/YlxQ Clo1313_1224 IPR029064 50S ribosomal protein L30e-like Clo1313_1224 IPR039107 Ribosomal protein YlxQ Clo1313_1225 IPR006847 Translation initiation factor IF-2, N-terminal Clo1313_1225 IPR005225 Small GTP-binding protein domain Clo1313_1225 IPR000795 Transcription factor, GTP-binding domain Clo1313_1225 IPR000178 Translation initiation factor aIF-2, bacterial-like Clo1313_1225 IPR015760 Translation initiation factor IF- 2 Clo1313_1225 IPR023115 Translation initiation factor IF- 2, domain 3 Clo1313_1225 IPR036925 Translation initiation factor IF-2, domain 3 superfamily Clo1313_1225 IPR009000 Translation protein, beta-barrel domain superfamily Clo1313_1225 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_1226 IPR015946 K homology domain-like, alpha/beta Clo1313_1226 IPR000238 Ribosome-binding factor A Clo1313_1226 IPR020053 Ribosome-binding factor A, conserved site Clo1313_1226 IPR023799 Ribosome-binding factor A domain superfamily Clo1313_1227 IPR003156 DHHA1 domain Clo1313_1227 IPR038763 DHH phosphoesterase superfamily Clo1313_1227 IPR001667 DDH domain Clo1313_1228 IPR014780 tRNA pseudouridine synthase II, TruB Clo1313_1228 IPR002501 Pseudouridine synthase II, N-terminal Clo1313_1228 IPR020103 Pseudouridine synthase, catalytic domain superfamily Clo1313_1228 IPR032819 tRNA pseudouridylate synthase B, C-terminal Clo1313_1229 IPR015864 FAD synthetase Clo1313_1229 IPR023468 Riboflavin kinase Clo1313_1229 IPR002606 Riboflavin kinase, bacterial Clo1313_1229 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic Clo1313_1229 IPR023465 Riboflavin kinase domain superfamily Clo1313_1229 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clo1313_1231 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like Clo1313_1231 IPR007863 Peptidase M16, C-terminal Clo1313_1232 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like Clo1313_1232 IPR011765 Peptidase M16, N-terminal Clo1313_1232 IPR007863 Peptidase M16, C-terminal Clo1313_1233 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt Clo1313_1235 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site Clo1313_1235 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA Clo1313_1235 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB Clo1313_1236 IPR037914 SpoVT-AbrB domain superfamily Clo1313_1236 IPR003444 Transcriptional regulator MraZ Clo1313_1236 IPR035644 MraZ, C-terminal Clo1313_1236 IPR020603 MraZ domain Clo1313_1236 IPR035642 MraZ, N-terminal Clo1313_1236 IPR038619 MraZ superfamily Clo1313_1236 IPR007159 SpoVT-AbrB domain Clo1313_1237 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clo1313_1237 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily Clo1313_1237 IPR002903 Ribosomal RNA small subunit methyltransferase H Clo1313_1239 IPR012338 Beta-lactamase/transpeptidase-like Clo1313_1239 IPR005543 PASTA domain Clo1313_1239 IPR005311 Penicillin-binding protein, dimerisation domain Clo1313_1239 IPR036138 Penicillin-binding protein, dimerisation domain superfamily Clo1313_1239 IPR001460 Penicillin-binding protein, transpeptidase Clo1313_1239 IPR011927 Stage V sporulation protein D Clo1313_1240 IPR036565 Mur-like, catalytic domain superfamily Clo1313_1240 IPR004101 Mur ligase, C-terminal Clo1313_1240 IPR036615 Mur ligase, C-terminal domain superfamily Clo1313_1240 IPR013221 Mur ligase, central Clo1313_1240 IPR000713 Mur ligase, N-terminal catalytic domain Clo1313_1240 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase Clo1313_1240 IPR035911 MurE/MurF, N-terminal Clo1313_1241 IPR036615 Mur ligase, C-terminal domain superfamily Clo1313_1241 IPR036565 Mur-like, catalytic domain superfamily Clo1313_1241 IPR004101 Mur ligase, C-terminal Clo1313_1241 IPR013221 Mur ligase, central Clo1313_1241 IPR000713 Mur ligase, N-terminal catalytic domain Clo1313_1241 IPR035911 MurE/MurF, N-terminal Clo1313_1241 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase Clo1313_1242 IPR000715 Glycosyl transferase, family 4 Clo1313_1242 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase Clo1313_1242 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site Clo1313_1243 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA Clo1313_1243 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site Clo1313_1243 IPR013437 Probable peptidoglycan glycosyltransferase FtsW Clo1313_1243 IPR013438 Sporulation stage V, protein E Clo1313_1244 IPR007235 Glycosyl transferase, family 28, C-terminal Clo1313_1244 IPR004276 Glycosyltransferase family 28, N-terminal domain Clo1313_1244 IPR006009 N-acetylglucosaminyltransferase, MurG Clo1313_1245 IPR001986 Enolpyruvate transferase domain Clo1313_1245 IPR036968 Enolpyruvate transferase domain superfamily Clo1313_1245 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta Clo1313_1245 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase Clo1313_1248 IPR001207 Transposase, mutator type Clo1313_1249 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_1249 IPR000212 DNA helicase, UvrD/REP type Clo1313_1249 IPR014017 UvrD-like DNA helicase, C-terminal Clo1313_1249 IPR013986 DExx box DNA helicase domain superfamily Clo1313_1249 IPR005751 ATP-dependent DNA helicase PcrA Clo1313_1249 IPR034739 UvrD/AddA helicase, N-terminal Clo1313_1249 IPR014016 UvrD-like helicase, ATP-binding domain Clo1313_1251 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain Clo1313_1251 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR Clo1313_1251 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_1252 IPR036393 Acetylglutamate kinase-like superfamily Clo1313_1252 IPR002912 ACT domain Clo1313_1252 IPR027795 CASTOR, ACT domain Clo1313_1252 IPR018042 Aspartate kinase, conserved site Clo1313_1252 IPR001341 Aspartate kinase Clo1313_1252 IPR005260 Aspartate kinase, monofunctional class Clo1313_1252 IPR001048 Aspartate/glutamate/uridylate kinase Clo1313_1252 IPR041740 Aspartokinase catalytic domain Clo1313_1253 IPR000846 Dihydrodipicolinate reductase, N-terminal Clo1313_1253 IPR036291 NAD(P)-binding domain superfamily Clo1313_1253 IPR023940 Dihydrodipicolinate reductase Clo1313_1253 IPR022664 Dihydrodipicolinate reductase, conserved site Clo1313_1253 IPR022663 Dihydrodipicolinate reductase, C-terminal Clo1313_1254 IPR002220 DapA-like Clo1313_1254 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA Clo1313_1254 IPR013785 Aldolase-type TIM barrel Clo1313_1254 IPR020624 Schiff base-forming aldolase, conserved site Clo1313_1254 IPR020625 Schiff base-forming aldolase, active site Clo1313_1255 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type Clo1313_1255 IPR012280 Semialdehyde dehydrogenase, dimerisation domain Clo1313_1255 IPR000534 Semialdehyde dehydrogenase, NAD-binding Clo1313_1255 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site Clo1313_1255 IPR012080 Aspartate-semialdehyde dehydrogenase Clo1313_1255 IPR036291 NAD(P)-binding domain superfamily Clo1313_1256 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal Clo1313_1256 IPR013486 Sporulation stage II protein D, amidase enhancer LytB Clo1313_1256 IPR007253 Putative cell wall binding repeat 2 Clo1313_1257 IPR042119 QueA, domain 2 Clo1313_1257 IPR042118 QueA, domain 1 Clo1313_1257 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA Clo1313_1257 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily Clo1313_1258 IPR002616 tRNA-guanine(15) transglycosylase-like Clo1313_1258 IPR004803 tRNA-guanine transglycosylase Clo1313_1258 IPR036511 Queuine tRNA-ribosyltransferase-like Clo1313_1259 IPR003849 Preprotein translocase YajC Clo1313_1262 IPR023050 Bifunctional protein PyrR Clo1313_1262 IPR029057 Phosphoribosyltransferase-like Clo1313_1262 IPR000836 Phosphoribosyltransferase domain Clo1313_1264 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain Clo1313_1264 IPR002082 Aspartate carbamoyltransferase Clo1313_1264 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily Clo1313_1264 IPR006130 Aspartate/ornithine carbamoyltransferase Clo1313_1264 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding Clo1313_1265 IPR032466 Metal-dependent hydrolase Clo1313_1265 IPR011059 Metal-dependent hydrolase, composite domain superfamily Clo1313_1265 IPR006680 Amidohydrolase-related Clo1313_1265 IPR004722 Dihydroorotase Clo1313_1265 IPR002195 Dihydroorotase, conserved site Clo1313_1266 IPR011060 Ribulose-phosphate binding barrel Clo1313_1266 IPR001754 Orotidine 5'-phosphate decarboxylase domain Clo1313_1266 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 Clo1313_1266 IPR013785 Aldolase-type TIM barrel Clo1313_1267 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain Clo1313_1267 IPR006274 Carbamoyl-phosphate synthase, small subunit Clo1313_1267 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain Clo1313_1267 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily Clo1313_1267 IPR017926 Glutamine amidotransferase Clo1313_1267 IPR029062 Class I glutamine amidotransferase-like Clo1313_1268 IPR016185 Pre-ATP-grasp domain superfamily Clo1313_1268 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain Clo1313_1268 IPR036914 Methylglyoxal synthase-like domain superfamily Clo1313_1268 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain Clo1313_1268 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain Clo1313_1268 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily Clo1313_1268 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain Clo1313_1268 IPR011761 ATP-grasp fold Clo1313_1268 IPR011607 Methylglyoxal synthase-like domain Clo1313_1268 IPR006275 Carbamoyl-phosphate synthase, large subunit Clo1313_1269 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit Clo1313_1269 IPR037117 Dihydroorotate dehydrogenase, electron transfer subunit, Fe-S binding domain superfamily Clo1313_1269 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain Clo1313_1269 IPR023455 Dihydroorotate dehydrogenase electron transfer subunit Clo1313_1269 IPR017927 FAD-binding domain, ferredoxin reductase-type Clo1313_1269 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Clo1313_1269 IPR000951 Phthalate dioxygenase reductase Clo1313_1269 IPR017938 Riboflavin synthase-like beta-barrel Clo1313_1270 IPR001295 Dihydroorotate dehydrogenase, conserved site Clo1313_1270 IPR033888 Dihydroorotate dehydrogenase, class 1B Clo1313_1270 IPR024920 Dihydroorotate dehydrogenase, class 1 Clo1313_1270 IPR005720 Dihydroorotate dehydrogenase domain Clo1313_1270 IPR013785 Aldolase-type TIM barrel Clo1313_1270 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 Clo1313_1271 IPR013078 Histidine phosphatase superfamily, clade-1 Clo1313_1271 IPR029033 Histidine phosphatase superfamily Clo1313_1271 IPR005952 Phosphoglycerate mutase 1 Clo1313_1275 IPR007197 Radical SAM Clo1313_1275 IPR002792 TRAM domain Clo1313_1275 IPR041582 RimO, TRAM domain Clo1313_1275 IPR023404 Radical SAM, alpha/beta horseshoe Clo1313_1275 IPR038135 Methylthiotransferase, N-terminal domain superfamily Clo1313_1275 IPR013848 Methylthiotransferase, N-terminal Clo1313_1275 IPR020612 Methylthiotransferase, conserved site Clo1313_1275 IPR006638 Elp3/MiaB/NifB Clo1313_1275 IPR005839 Methylthiotransferase Clo1313_1275 IPR005840 Ribosomal protein S12 methylthiotransferase RimO Clo1313_1276 IPR000462 CDP-alcohol phosphatidyltransferase Clo1313_1276 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase Clo1313_1279 IPR036390 Winged helix DNA-binding domain superfamily Clo1313_1279 IPR017275 Transcription factor FapR Clo1313_1279 IPR006683 Thioesterase domain Clo1313_1279 IPR029069 HotDog domain superfamily Clo1313_1279 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_1280 IPR003664 Fatty acid synthesis PlsX protein Clo1313_1280 IPR012281 Phospholipid biosynthesis protein, PlsX-like Clo1313_1281 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Clo1313_1281 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal Clo1313_1281 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 Clo1313_1281 IPR016039 Thiolase-like Clo1313_1282 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Clo1313_1282 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Clo1313_1282 IPR024925 Malonyl CoA-acyl carrier protein transacylase Clo1313_1282 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type Clo1313_1282 IPR001227 Acyl transferase domain superfamily Clo1313_1282 IPR014043 Acyl transferase Clo1313_1283 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase Clo1313_1283 IPR036291 NAD(P)-binding domain superfamily Clo1313_1283 IPR002347 Short-chain dehydrogenase/reductase SDR Clo1313_1284 IPR036736 ACP-like superfamily Clo1313_1284 IPR003231 Acyl carrier protein (ACP) Clo1313_1284 IPR020806 Polyketide synthase, phosphopantetheine-binding domain Clo1313_1284 IPR009081 Phosphopantetheine binding ACP domain Clo1313_1284 IPR006162 Phosphopantetheine attachment site Clo1313_1285 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Clo1313_1285 IPR014030 Beta-ketoacyl synthase, N-terminal Clo1313_1285 IPR016039 Thiolase-like Clo1313_1285 IPR014031 Beta-ketoacyl synthase, C-terminal Clo1313_1285 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 Clo1313_1285 IPR018201 Beta-ketoacyl synthase, active site Clo1313_1285 IPR000794 Beta-ketoacyl synthase Clo1313_1286 IPR000999 Ribonuclease III domain Clo1313_1286 IPR011907 Ribonuclease III Clo1313_1286 IPR014720 Double-stranded RNA-binding domain Clo1313_1286 IPR036389 Ribonuclease III, endonuclease domain superfamily Clo1313_1288 IPR036882 Alba-like domain superfamily Clo1313_1288 IPR007347 Sporulation stage V, protein S Clo1313_1289 IPR005255 PdxA family Clo1313_1290 IPR024704 Structural maintenance of chromosomes protein Clo1313_1290 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_1290 IPR003395 RecF/RecN/SMC, N-terminal Clo1313_1290 IPR010935 SMCs flexible hinge Clo1313_1290 IPR036277 SMCs flexible hinge superfamily Clo1313_1290 IPR011890 Structural maintenance of chromosomes protein, prokaryotic Clo1313_1291 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain Clo1313_1291 IPR036225 SRP/SRP receptor, N-terminal Clo1313_1291 IPR004390 Signal-recognition particle receptor FtsY Clo1313_1291 IPR013822 Signal recognition particle SRP54, helical bundle Clo1313_1291 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily Clo1313_1291 IPR003593 AAA+ ATPase domain Clo1313_1291 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_1293 IPR039286 Exosporium protein C Clo1313_1294 IPR039286 Exosporium protein C Clo1313_1295 IPR010190 Diaminopimelate dehydrogenase, Ddh Clo1313_1295 IPR036291 NAD(P)-binding domain superfamily Clo1313_1295 IPR032094 Meso-diaminopimelate D-dehydrogenase, C-terminal Clo1313_1301 IPR000924 Glutamyl/glutaminyl-tRNA synthetase Clo1313_1301 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain Clo1313_1301 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily Clo1313_1301 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Clo1313_1301 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily Clo1313_1301 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clo1313_1301 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain Clo1313_1301 IPR022861 Glutamine-tRNA ligase, bacterial Clo1313_1301 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site Clo1313_1301 IPR004514 Glutamine-tRNA synthetase Clo1313_1305 IPR016134 Dockerin domain Clo1313_1305 IPR002105 Dockerin type I repeat Clo1313_1305 IPR029058 Alpha/Beta hydrolase fold Clo1313_1305 IPR017853 Glycoside hydrolase superfamily Clo1313_1305 IPR031158 Glycosyl hydrolases family 10, active site Clo1313_1305 IPR003305 Carbohydrate-binding, CenC-like Clo1313_1305 IPR001000 Glycoside hydrolase family 10 domain Clo1313_1305 IPR018247 EF-Hand 1, calcium-binding site Clo1313_1305 IPR036439 Dockerin domain superfamily Clo1313_1305 IPR000801 Putative esterase Clo1313_1305 IPR008979 Galactose-binding-like domain superfamily Clo1313_1306 IPR003730 Multi-copper polyphenol oxidoreductase Clo1313_1306 IPR011324 Cytotoxic necrotizing factor-like, catalytic Clo1313_1306 IPR038371 Multi-copper polyphenol oxidoreductase superfamily Clo1313_1308 IPR039424 Solute-binding protein family 5 Clo1313_1308 IPR030678 Peptide/nickel binding protein, MppA-type Clo1313_1308 IPR000914 Solute-binding protein family 5 domain Clo1313_1308 IPR023765 Solute-binding protein family 5, conserved site Clo1313_1309 IPR001872 Peptidase A8, signal peptidase II Clo1313_1310 IPR006225 Pseudouridine synthase, RluC/RluD Clo1313_1310 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site Clo1313_1310 IPR006145 Pseudouridine synthase, RsuA/RluA Clo1313_1310 IPR002942 RNA-binding S4 domain Clo1313_1310 IPR036986 RNA-binding S4 domain superfamily Clo1313_1310 IPR020103 Pseudouridine synthase, catalytic domain superfamily Clo1313_1313 IPR017705 Ribonuclease Y Clo1313_1313 IPR022711 Ribonuclease Y, N-terminal Clo1313_1313 IPR004088 K Homology domain, type 1 Clo1313_1313 IPR004087 K Homology domain Clo1313_1313 IPR003607 HD/PDEase domain Clo1313_1313 IPR036612 K Homology domain, type 1 superfamily Clo1313_1313 IPR006674 HD domain Clo1313_1313 IPR006675 HDIG domain Clo1313_1314 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Clo1313_1314 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site Clo1313_1314 IPR005791 Protein translocase subunit SecD Clo1313_1314 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial Clo1313_1315 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial Clo1313_1315 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Clo1313_1315 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site Clo1313_1315 IPR005665 Protein-export membrane protein SecF, bacterial Clo1313_1316 IPR003700 Ketopantoate hydroxymethyltransferase Clo1313_1316 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily Clo1313_1316 IPR040442 Pyruvate kinase-like domain superfamily Clo1313_1317 IPR003721 Pantoate-beta-alanine ligase Clo1313_1317 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain Clo1313_1317 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clo1313_1318 IPR009010 Aspartate decarboxylase-like domain superfamily Clo1313_1318 IPR003190 Aspartate decarboxylase Clo1313_1320 IPR003607 HD/PDEase domain Clo1313_1320 IPR006675 HDIG domain Clo1313_1320 IPR037522 HD-GYP domain Clo1313_1320 IPR006674 HD domain Clo1313_1320 IPR021812 Protein of unknown function DUF3391 Clo1313_1321 IPR006674 HD domain Clo1313_1321 IPR003607 HD/PDEase domain Clo1313_1321 IPR023023 dNTP triphosphohydrolase, type 2 Clo1313_1321 IPR006261 dNTP triphosphohydrolase Clo1313_1321 IPR026875 Phosphohydrolase-associated domain Clo1313_1323 IPR034151 Bacterial DnaG primase, TOPRIM domain Clo1313_1323 IPR019475 DNA primase, DnaB-helicase binding domain Clo1313_1323 IPR006295 DNA primase, DnaG Clo1313_1323 IPR036977 DNA Primase, CHC2-type zinc finger Clo1313_1323 IPR030846 DNA primase DnaG, bacteria Clo1313_1323 IPR006171 TOPRIM domain Clo1313_1323 IPR002694 Zinc finger, CHC2-type Clo1313_1323 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily Clo1313_1323 IPR013264 DNA primase, catalytic core, N-terminal Clo1313_1323 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal Clo1313_1324 IPR028630 RNA polymerase sigma factor RpoD Clo1313_1324 IPR042189 Sigma-70 factor, region 1.1 superfamily Clo1313_1324 IPR007127 RNA polymerase sigma factor 70, region 1.1 Clo1313_1324 IPR007630 RNA polymerase sigma-70 region 4 Clo1313_1324 IPR007624 RNA polymerase sigma-70 region 3 Clo1313_1324 IPR007627 RNA polymerase sigma-70 region 2 Clo1313_1324 IPR009042 RNA polymerase sigma-70 region 1.2 Clo1313_1324 IPR000943 RNA polymerase sigma-70 Clo1313_1324 IPR014284 RNA polymerase sigma-70 like domain Clo1313_1324 IPR012760 RNA polymerase sigma factor RpoD, C-terminal Clo1313_1324 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_1324 IPR013325 RNA polymerase sigma factor, region 2 Clo1313_1324 IPR013324 RNA polymerase sigma factor, region 3/4-like Clo1313_1327 IPR006901 tRNA methyltransferase TrmK Clo1313_1327 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clo1313_1328 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Clo1313_1328 IPR017221 GTP cyclohydrolase 1 type 2//Nif3, bacteria Clo1313_1328 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 Clo1313_1328 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily Clo1313_1329 IPR011006 CheY-like superfamily Clo1313_1329 IPR003607 HD/PDEase domain Clo1313_1329 IPR037522 HD-GYP domain Clo1313_1329 IPR001789 Signal transduction response regulator, receiver domain Clo1313_1330 IPR039425 RNA polymerase sigma-70 like Clo1313_1330 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_1330 IPR013324 RNA polymerase sigma factor, region 3/4-like Clo1313_1330 IPR013325 RNA polymerase sigma factor, region 2 Clo1313_1330 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 Clo1313_1330 IPR007627 RNA polymerase sigma-70 region 2 Clo1313_1330 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site Clo1313_1330 IPR014294 RNA polymerase sigma-W, bacillaceae Clo1313_1330 IPR014284 RNA polymerase sigma-70 like domain Clo1313_1334 IPR029060 PIN-like domain superfamily Clo1313_1334 IPR012337 Ribonuclease H-like superfamily Clo1313_1334 IPR008918 Helix-hairpin-helix motif, class 2 Clo1313_1334 IPR002298 DNA polymerase A Clo1313_1334 IPR018320 DNA polymerase 1 Clo1313_1334 IPR020045 DNA polymerase I-like, H3TH domain Clo1313_1334 IPR001098 DNA-directed DNA polymerase, family A, palm domain Clo1313_1334 IPR019760 DNA-directed DNA polymerase, family A, conserved site Clo1313_1334 IPR036279 5'-3' exonuclease, C-terminal domain superfamily Clo1313_1334 IPR036397 Ribonuclease H superfamily Clo1313_1334 IPR002421 5'-3' exonuclease, N-terminal Clo1313_1334 IPR002562 3'-5' exonuclease domain Clo1313_1334 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal Clo1313_1335 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_1335 IPR001977 Dephospho-CoA kinase Clo1313_1338 IPR000620 EamA domain Clo1313_1339 IPR039435 Diguanylate cyclase DosC, globin sensor domain Clo1313_1339 IPR000160 GGDEF domain Clo1313_1339 IPR009050 Globin-like superfamily Clo1313_1339 IPR012292 Globin/Protoglobin Clo1313_1339 IPR029787 Nucleotide cyclase Clo1313_1340 IPR013785 Aldolase-type TIM barrel Clo1313_1340 IPR006218 DAHP synthetase I/KDSA Clo1313_1340 IPR006268 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 Clo1313_1340 IPR041071 DAHP synthase ferredoxin-like domain Clo1313_1341 IPR039315 Chemotaxis protein CheW Clo1313_1341 IPR036061 CheW-like domain superfamily Clo1313_1341 IPR002545 CheW-like domain Clo1313_1342 IPR031167 OBG-type guanine nucleotide-binding (G) domain Clo1313_1342 IPR006073 GTP binding domain Clo1313_1342 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_1342 IPR012676 TGS-like Clo1313_1342 IPR023192 TGS-like domain superfamily Clo1313_1342 IPR013029 YchF, C-terminal domain Clo1313_1342 IPR012675 Beta-grasp domain superfamily Clo1313_1342 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 Clo1313_1342 IPR041706 YchF, N-terminal Clo1313_1342 IPR004095 TGS Clo1313_1344 IPR019999 Anthranilate synthase component I-like Clo1313_1344 IPR015890 Chorismate-utilising enzyme, C-terminal Clo1313_1344 IPR005256 Anthranilate synthase component I, PabB-like Clo1313_1344 IPR006805 Anthranilate synthase component I, N-terminal Clo1313_1344 IPR005801 ADC synthase Clo1313_1345 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain Clo1313_1345 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Clo1313_1345 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Clo1313_1345 IPR017459 Glycosyl transferase family 3, N-terminal domain Clo1313_1345 IPR000312 Glycosyl transferase, family 3 Clo1313_1345 IPR017926 Glutamine amidotransferase Clo1313_1345 IPR029062 Class I glutamine amidotransferase-like Clo1313_1345 IPR005940 Anthranilate phosphoribosyl transferase Clo1313_1346 IPR017459 Glycosyl transferase family 3, N-terminal domain Clo1313_1346 IPR000312 Glycosyl transferase, family 3 Clo1313_1346 IPR005940 Anthranilate phosphoribosyl transferase Clo1313_1346 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Clo1313_1346 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Clo1313_1347 IPR013785 Aldolase-type TIM barrel Clo1313_1347 IPR013798 Indole-3-glycerol phosphate synthase Clo1313_1347 IPR001468 Indole-3-glycerol phosphate synthase, conserved site Clo1313_1347 IPR011060 Ribulose-phosphate binding barrel Clo1313_1348 IPR013785 Aldolase-type TIM barrel Clo1313_1348 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) Clo1313_1348 IPR011060 Ribulose-phosphate binding barrel Clo1313_1357 IPR022147 Glutamine synthetase type III N-terminal Clo1313_1357 IPR027303 Glutamine synthetase, glycine-rich site Clo1313_1357 IPR008146 Glutamine synthetase, catalytic domain Clo1313_1357 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain Clo1313_1357 IPR040577 Glutamine synthetase, C-terminal Clo1313_1359 IPR004474 Cell envelope-related transcriptional attenuator domain Clo1313_1360 IPR009040 Ferritin-like diiron domain Clo1313_1360 IPR012347 Ferritin-like Clo1313_1360 IPR009078 Ferritin-like superfamily Clo1313_1360 IPR003251 Rubrerythrin Clo1313_1360 IPR024934 Rubredoxin-like domain Clo1313_1362 IPR022853 Uncharacterised protein family YdfA-immunity Clo1313_1363 IPR029045 ClpP/crotonase-like domain superfamily Clo1313_1363 IPR002810 NfeD-like, C-terminal domain Clo1313_1363 IPR002825 Peptidase S49, serine-peptidase prokaryotes Clo1313_1364 IPR001544 Aminotransferase class IV Clo1313_1364 IPR018300 Aminotransferase, class IV, conserved site Clo1313_1364 IPR036038 Aminotransferase-like, PLP-dependent enzymes Clo1313_1364 IPR005786 Branched-chain amino acid aminotransferase II Clo1313_1364 IPR033939 Branched-chain aminotransferase Clo1313_1365 IPR036412 HAD-like superfamily Clo1313_1365 IPR006439 HAD hydrolase, subfamily IA Clo1313_1365 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Clo1313_1365 IPR010021 HAD-superfamily phosphatase, YqeG-like Clo1313_1365 IPR023214 HAD superfamily Clo1313_1366 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal Clo1313_1366 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase Clo1313_1366 IPR022893 Shikimate dehydrogenase family Clo1313_1366 IPR011342 Shikimate dehydrogenase Clo1313_1366 IPR041121 SDH, C-terminal Clo1313_1366 IPR036291 NAD(P)-binding domain superfamily Clo1313_1367 IPR037257 General secretory system II, protein E, N-terminal superfamily Clo1313_1367 IPR001482 Type II/IV secretion system protein Clo1313_1367 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_1367 IPR007831 General secretory system II, protein E, N-terminal Clo1313_1367 IPR003593 AAA+ ATPase domain Clo1313_1367 IPR013374 ATPase, type IV, pilus assembly, PilB Clo1313_1367 IPR042181 Type II secretion system, protein E, N-terminal Clo1313_1368 IPR010627 Peptidase A24A, N-terminal Clo1313_1368 IPR014032 Peptidase A24A, prepilin type IV, bacterial Clo1313_1368 IPR000045 Prepilin type IV endopeptidase, peptidase domain Clo1313_1370 IPR036237 Xylose isomerase-like superfamily Clo1313_1370 IPR001719 AP endonuclease 2 Clo1313_1370 IPR018246 AP endonuclease 2, zinc binding site Clo1313_1370 IPR013022 Xylose isomerase-like, TIM barrel domain Clo1313_1371 IPR001874 Dehydroquinase, class II Clo1313_1371 IPR036441 Dehydroquinase, class II superfamily Clo1313_1371 IPR018509 Dehydroquinase, class II, conserved site Clo1313_1372 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Clo1313_1372 IPR036005 Creatinase/aminopeptidase-like Clo1313_1372 IPR000587 Creatinase, N-terminal Clo1313_1372 IPR000994 Peptidase M24 Clo1313_1372 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site Clo1313_1372 IPR001714 Peptidase M24, methionine aminopeptidase Clo1313_1373 IPR014722 Ribosomal protein L2, domain 2 Clo1313_1373 IPR020599 Translation elongation factor P/YeiP Clo1313_1373 IPR013185 Translation elongation factor, KOW-like Clo1313_1373 IPR013852 Translation elongation factor P/YeiP, conserved site Clo1313_1373 IPR011768 Translation elongation factor P Clo1313_1373 IPR008991 Translation protein SH3-like domain superfamily Clo1313_1373 IPR001059 Translation elongation factor P/YeiP, central Clo1313_1373 IPR012340 Nucleic acid-binding, OB-fold Clo1313_1373 IPR015365 Elongation factor P, C-terminal Clo1313_1375 IPR036515 Transposase IS200-like superfamily Clo1313_1375 IPR002686 Transposase IS200-like Clo1313_1376 IPR014217 Sporulation stage III, protein AA Clo1313_1376 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_1376 IPR003593 AAA+ ATPase domain Clo1313_1378 IPR009570 Stage III sporulation protein AC Clo1313_1378 IPR025664 Stage III sporulation protein AC/AD family Clo1313_1379 IPR025664 Stage III sporulation protein AC/AD family Clo1313_1379 IPR014211 Stage III sporulation protein AD Clo1313_1380 IPR014194 Sporulation stage III, protein AE Clo1313_1382 IPR014195 Sporulation stage III, protein AG Clo1313_1384 IPR005531 Alkaline shock protein Asp23 Clo1313_1387 IPR006027 NusB/RsmB/TIM44 Clo1313_1387 IPR011605 NusB antitermination factor Clo1313_1387 IPR035926 NusB-like superfamily Clo1313_1388 IPR020579 Exonuclease VII, large subunit, C-terminal Clo1313_1388 IPR003753 Exonuclease VII, large subunit Clo1313_1388 IPR016102 Succinyl-CoA synthetase-like Clo1313_1388 IPR025824 OB-fold nucleic acid binding domain Clo1313_1389 IPR037004 Exonuclease VII, small subunit superfamily Clo1313_1389 IPR003761 Exonuclease VII, small subunit Clo1313_1390 IPR033749 Polyprenyl synthetase, conserved site Clo1313_1390 IPR000092 Polyprenyl synthetase Clo1313_1390 IPR008949 Isoprenoid synthase domain superfamily Clo1313_1391 IPR003832 Protein of unknown function DUF212 Clo1313_1393 IPR029061 Thiamin diphosphate-binding fold Clo1313_1393 IPR005477 Deoxyxylulose-5-phosphate synthase Clo1313_1393 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II Clo1313_1393 IPR005474 Transketolase, N-terminal Clo1313_1393 IPR033248 Transketolase, C-terminal domain Clo1313_1393 IPR020826 Transketolase binding site Clo1313_1393 IPR005475 Transketolase-like, pyrimidine-binding domain Clo1313_1394 IPR002942 RNA-binding S4 domain Clo1313_1394 IPR002877 Ribosomal RNA methyltransferase FtsJ domain Clo1313_1394 IPR004538 Haemolysin A /rRNA methyltransferase TlyA Clo1313_1394 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clo1313_1394 IPR036986 RNA-binding S4 domain superfamily Clo1313_1396 IPR002105 Dockerin type I repeat Clo1313_1396 IPR014756 Immunoglobulin E-set Clo1313_1396 IPR018221 Glycoside hydrolase family 9, His active site Clo1313_1396 IPR033126 Glycosyl hydrolases family 9, Asp/Glu active sites Clo1313_1396 IPR001701 Glycoside hydrolase family 9 Clo1313_1396 IPR036439 Dockerin domain superfamily Clo1313_1396 IPR016134 Dockerin domain Clo1313_1396 IPR004197 Cellulase, Ig-like domain Clo1313_1396 IPR012341 Six-hairpin glycosidase-like superfamily Clo1313_1396 IPR013783 Immunoglobulin-like fold Clo1313_1396 IPR008928 Six-hairpin glycosidase superfamily Clo1313_1398 IPR024745 Glycoside hydrolase, family 44 Clo1313_1398 IPR017853 Glycoside hydrolase superfamily Clo1313_1398 IPR013780 Glycosyl hydrolase, all-beta Clo1313_1398 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clo1313_1398 IPR001956 Carbohydrate-binding module 3 Clo1313_1398 IPR018087 Glycoside hydrolase, family 5, conserved site Clo1313_1398 IPR001547 Glycoside hydrolase, family 5 Clo1313_1398 IPR036966 Carbohydrate-binding module 3 superfamily Clo1313_1401 IPR003593 AAA+ ATPase domain Clo1313_1401 IPR003439 ABC transporter-like Clo1313_1401 IPR017871 ABC transporter, conserved site Clo1313_1401 IPR025302 Domain of unknown function DUF4162 Clo1313_1401 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_1404 IPR000160 GGDEF domain Clo1313_1404 IPR009050 Globin-like superfamily Clo1313_1404 IPR012292 Globin/Protoglobin Clo1313_1404 IPR029787 Nucleotide cyclase Clo1313_1404 IPR039435 Diguanylate cyclase DosC, globin sensor domain Clo1313_1405 IPR002504 NAD kinase Clo1313_1405 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal Clo1313_1405 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal Clo1313_1405 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily Clo1313_1406 IPR001669 Arginine repressor Clo1313_1406 IPR020899 Arginine repressor, C-terminal Clo1313_1406 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_1406 IPR036390 Winged helix DNA-binding domain superfamily Clo1313_1406 IPR020900 Arginine repressor, DNA-binding domain Clo1313_1406 IPR036251 Arginine repressor, C-terminal domain superfamily Clo1313_1407 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_1407 IPR004604 DNA recombination/repair protein RecN Clo1313_1407 IPR003395 RecF/RecN/SMC, N-terminal Clo1313_1408 IPR041489 PDZ domain 6 Clo1313_1408 IPR009003 Peptidase S1, PA clan Clo1313_1408 IPR014219 Peptidase S55, sporulation stage IV, protein B Clo1313_1408 IPR036034 PDZ superfamily Clo1313_1408 IPR001478 PDZ domain Clo1313_1408 IPR008763 Peptidase S55, SpoIVB Clo1313_1409 IPR011006 CheY-like superfamily Clo1313_1409 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_1409 IPR014879 Sporulation initiation factor Spo0A, C-terminal Clo1313_1409 IPR001789 Signal transduction response regulator, receiver domain Clo1313_1409 IPR016032 Signal transduction response regulator, C-terminal effector Clo1313_1409 IPR012052 Sporulation transcription factor Spo0A Clo1313_1410 IPR011006 CheY-like superfamily Clo1313_1410 IPR001789 Signal transduction response regulator, receiver domain Clo1313_1411 IPR036061 CheW-like domain superfamily Clo1313_1411 IPR003594 Histidine kinase/HSP90-like ATPase Clo1313_1411 IPR035891 CheY-binding domain of CheA Clo1313_1411 IPR010808 Chemotaxis protein CheA, P2 response regulator-binding Clo1313_1411 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clo1313_1411 IPR005467 Histidine kinase domain Clo1313_1411 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Clo1313_1411 IPR036641 HPT domain superfamily Clo1313_1411 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Clo1313_1411 IPR002545 CheW-like domain Clo1313_1411 IPR037052 Chemotaxis protein CheA, P2 response regulator-binding domain superfamily Clo1313_1411 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Clo1313_1411 IPR004105 Histidine kinase CheA-like, homodimeric domain Clo1313_1411 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily Clo1313_1412 IPR002545 CheW-like domain Clo1313_1412 IPR036061 CheW-like domain superfamily Clo1313_1412 IPR039315 Chemotaxis protein CheW Clo1313_1413 IPR000780 MCP methyltransferase, CheR-type Clo1313_1413 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clo1313_1413 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily Clo1313_1413 IPR026024 Chemotaxis protein methyltransferase CheR Clo1313_1413 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal Clo1313_1413 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal Clo1313_1414 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type Clo1313_1414 IPR035909 Methylesterase CheB, C-terminal Clo1313_1414 IPR011006 CheY-like superfamily Clo1313_1414 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase Clo1313_1414 IPR001789 Signal transduction response regulator, receiver domain Clo1313_1415 IPR019247 Histidine kinase BarA, N-terminal Clo1313_1415 IPR036641 HPT domain superfamily Clo1313_1415 IPR001789 Signal transduction response regulator, receiver domain Clo1313_1415 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Clo1313_1415 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Clo1313_1415 IPR005467 Histidine kinase domain Clo1313_1415 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clo1313_1415 IPR003594 Histidine kinase/HSP90-like ATPase Clo1313_1415 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Clo1313_1415 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Clo1313_1415 IPR003660 HAMP domain Clo1313_1415 IPR011006 CheY-like superfamily Clo1313_1416 IPR011006 CheY-like superfamily Clo1313_1416 IPR039420 Transcriptional regulatory protein WalR-like Clo1313_1416 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_1416 IPR001789 Signal transduction response regulator, receiver domain Clo1313_1416 IPR001867 OmpR/PhoB-type DNA-binding domain Clo1313_1418 IPR002942 RNA-binding S4 domain Clo1313_1418 IPR006145 Pseudouridine synthase, RsuA/RluA Clo1313_1418 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site Clo1313_1418 IPR006225 Pseudouridine synthase, RluC/RluD Clo1313_1418 IPR020103 Pseudouridine synthase, catalytic domain superfamily Clo1313_1421 IPR001207 Transposase, mutator type Clo1313_1422 IPR005467 Histidine kinase domain Clo1313_1422 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Clo1313_1422 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Clo1313_1422 IPR000014 PAS domain Clo1313_1422 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clo1313_1422 IPR003594 Histidine kinase/HSP90-like ATPase Clo1313_1422 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Clo1313_1422 IPR031967 PhoR, single Cache-like domain Clo1313_1422 IPR013767 PAS fold Clo1313_1422 IPR035965 PAS domain superfamily Clo1313_1423 IPR011006 CheY-like superfamily Clo1313_1423 IPR039420 Transcriptional regulatory protein WalR-like Clo1313_1423 IPR001789 Signal transduction response regulator, receiver domain Clo1313_1423 IPR001867 OmpR/PhoB-type DNA-binding domain Clo1313_1423 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_1424 IPR036514 SGNH hydrolase superfamily Clo1313_1424 IPR013830 SGNH hydrolase-type esterase domain Clo1313_1424 IPR036439 Dockerin domain superfamily Clo1313_1424 IPR016134 Dockerin domain Clo1313_1424 IPR002105 Dockerin type I repeat Clo1313_1425 IPR037461 CtCE2-like domain Clo1313_1425 IPR040794 Carbohydrate esterase 2, N-terminal Clo1313_1425 IPR036514 SGNH hydrolase superfamily Clo1313_1425 IPR017853 Glycoside hydrolase superfamily Clo1313_1425 IPR018087 Glycoside hydrolase, family 5, conserved site Clo1313_1425 IPR002105 Dockerin type I repeat Clo1313_1425 IPR001547 Glycoside hydrolase, family 5 Clo1313_1425 IPR001087 GDSL lipase/esterase Clo1313_1425 IPR008979 Galactose-binding-like domain superfamily Clo1313_1425 IPR036439 Dockerin domain superfamily Clo1313_1425 IPR016134 Dockerin domain Clo1313_1426 IPR006047 Glycosyl hydrolase, family 13, catalytic domain Clo1313_1426 IPR013783 Immunoglobulin-like fold Clo1313_1426 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain Clo1313_1426 IPR014756 Immunoglobulin E-set Clo1313_1426 IPR017853 Glycoside hydrolase superfamily Clo1313_1426 IPR013780 Glycosyl hydrolase, all-beta Clo1313_1427 IPR009651 Putative methionine gamma-lyase Clo1313_1427 IPR015424 Pyridoxal phosphate-dependent transferase Clo1313_1427 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Clo1313_1429 IPR001608 Alanine racemase, N-terminal Clo1313_1429 IPR029066 PLP-binding barrel Clo1313_1429 IPR011078 Pyridoxal phosphate homeostasis protein Clo1313_1430 IPR038594 SepF-like superfamily Clo1313_1430 IPR007561 Cell division protein SepF/SepF-related Clo1313_1430 IPR023052 Cell division protein SepF Clo1313_1432 IPR040591 YlmH, putative RNA-binding domain Clo1313_1432 IPR036986 RNA-binding S4 domain superfamily Clo1313_1432 IPR002942 RNA-binding S4 domain Clo1313_1432 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily Clo1313_1433 IPR007793 DivIVA family Clo1313_1433 IPR019933 DivIVA domain Clo1313_1434 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clo1313_1434 IPR002301 Isoleucine-tRNA ligase Clo1313_1434 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding Clo1313_1434 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain Clo1313_1434 IPR010663 Zinc finger, FPG/IleRS-type Clo1313_1434 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site Clo1313_1434 IPR002300 Aminoacyl-tRNA synthetase, class Ia Clo1313_1434 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain Clo1313_1434 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding Clo1313_1434 IPR023585 Isoleucine-tRNA ligase, type 1 Clo1313_1435 IPR016037 3-dehydroquinate synthase AroB Clo1313_1435 IPR030960 3-dehydroquinate synthase domain Clo1313_1435 IPR030963 3-dehydroquinate synthase family Clo1313_1438 IPR020612 Methylthiotransferase, conserved site Clo1313_1438 IPR002792 TRAM domain Clo1313_1438 IPR023404 Radical SAM, alpha/beta horseshoe Clo1313_1438 IPR007197 Radical SAM Clo1313_1438 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB Clo1313_1438 IPR038135 Methylthiotransferase, N-terminal domain superfamily Clo1313_1438 IPR013848 Methylthiotransferase, N-terminal Clo1313_1438 IPR005839 Methylthiotransferase Clo1313_1438 IPR006638 Elp3/MiaB/NifB Clo1313_1440 IPR003660 HAMP domain Clo1313_1440 IPR033479 Double Cache domain 1 Clo1313_1440 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Clo1313_1440 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding Clo1313_1440 IPR029151 Periplasmic sensor-like domain superfamily Clo1313_1442 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Clo1313_1442 IPR023214 HAD superfamily Clo1313_1442 IPR041492 Haloacid dehalogenase-like hydrolase Clo1313_1442 IPR036412 HAD-like superfamily Clo1313_1442 IPR006439 HAD hydrolase, subfamily IA Clo1313_1443 IPR014044 CAP domain Clo1313_1443 IPR035940 CAP superfamily Clo1313_1443 IPR014258 CAP domain, YkwD-like Clo1313_1445 IPR036187 DNA mismatch repair protein MutS, core domain superfamily Clo1313_1445 IPR005748 DNA mismatch repair protein MutS Clo1313_1445 IPR007695 DNA mismatch repair protein MutS-like, N-terminal Clo1313_1445 IPR017261 DNA mismatch repair protein MutS/MSH Clo1313_1445 IPR000432 DNA mismatch repair protein MutS, C-terminal Clo1313_1445 IPR007861 DNA mismatch repair protein MutS, clamp Clo1313_1445 IPR007696 DNA mismatch repair protein MutS, core Clo1313_1445 IPR016151 DNA mismatch repair protein MutS, N-terminal Clo1313_1445 IPR007860 DNA mismatch repair protein MutS, connector domain Clo1313_1445 IPR036678 MutS, connector domain superfamily Clo1313_1445 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_1446 IPR037198 MutL, C-terminal domain superfamily Clo1313_1446 IPR020568 Ribosomal protein S5 domain 2-type fold Clo1313_1446 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms Clo1313_1446 IPR042121 MutL, C-terminal domain, regulatory subdomain Clo1313_1446 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Clo1313_1446 IPR042120 MutL, C-terminal domain, dimerisation subdomain Clo1313_1446 IPR014762 DNA mismatch repair, conserved site Clo1313_1446 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clo1313_1446 IPR013507 DNA mismatch repair protein, S5 domain 2-like Clo1313_1446 IPR002099 DNA mismatch repair protein family, N-terminal Clo1313_1446 IPR020667 DNA mismatch repair protein, MutL Clo1313_1446 IPR014790 MutL, C-terminal, dimerisation Clo1313_1447 IPR039657 Dimethylallyltransferase Clo1313_1447 IPR018022 IPP transferase Clo1313_1447 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_1448 IPR005001 RNA-binding protein Hfq Clo1313_1448 IPR010920 LSM domain superfamily Clo1313_1449 IPR006200 Transcription regulator LexA Clo1313_1449 IPR039418 LexA-like Clo1313_1449 IPR015927 Peptidase S24/S26A/S26B/S26C Clo1313_1449 IPR006199 LexA repressor, DNA-binding domain Clo1313_1449 IPR006197 Peptidase S24, LexA-like Clo1313_1449 IPR036286 LexA/Signal peptidase-like superfamily Clo1313_1449 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_1449 IPR036390 Winged helix DNA-binding domain superfamily Clo1313_1449 IPR011991 ArsR-like helix-turn-helix domain Clo1313_1451 IPR013324 RNA polymerase sigma factor, region 3/4-like Clo1313_1451 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like Clo1313_1451 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_1452 IPR022941 Signal recognition particle, SRP54 subunit Clo1313_1452 IPR003593 AAA+ ATPase domain Clo1313_1452 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_1452 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily Clo1313_1452 IPR004780 Signal recognition particle protein Clo1313_1452 IPR013822 Signal recognition particle SRP54, helical bundle Clo1313_1452 IPR004125 Signal recognition particle, SRP54 subunit, M-domain Clo1313_1452 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain Clo1313_1452 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily Clo1313_1453 IPR000307 Ribosomal protein S16 Clo1313_1453 IPR023803 Ribosomal protein S16 domain superfamily Clo1313_1453 IPR020592 Ribosomal protein S16, conserved site Clo1313_1454 IPR015946 K homology domain-like, alpha/beta Clo1313_1454 IPR009019 K homology domain superfamily, prokaryotic type Clo1313_1454 IPR020627 Uncharacterised protein family UPF0109 Clo1313_1455 IPR002676 RimM, N-terminal Clo1313_1455 IPR027275 PRC-barrel domain Clo1313_1455 IPR009000 Translation protein, beta-barrel domain superfamily Clo1313_1455 IPR011961 16S rRNA processing protein RimM Clo1313_1455 IPR011033 PRC-barrel-like superfamily Clo1313_1455 IPR036976 RimM, N-terminal domain superfamily Clo1313_1456 IPR029028 Alpha/beta knot methyltransferases Clo1313_1456 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria Clo1313_1456 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal Clo1313_1456 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Clo1313_1456 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain Clo1313_1457 IPR038657 Ribosomal protein L19 superfamily Clo1313_1457 IPR018257 Ribosomal protein L19, conserved site Clo1313_1457 IPR001857 Ribosomal protein L19 Clo1313_1457 IPR008991 Translation protein SH3-like domain superfamily Clo1313_1458 IPR000223 Peptidase S26A, signal peptidase I Clo1313_1458 IPR036286 LexA/Signal peptidase-like superfamily Clo1313_1458 IPR019533 Peptidase S26 Clo1313_1458 IPR019756 Peptidase S26A, signal peptidase I, serine active site Clo1313_1458 IPR019757 Peptidase S26A, signal peptidase I, lysine active site Clo1313_1458 IPR019758 Peptidase S26A, signal peptidase I, conserved site Clo1313_1459 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain Clo1313_1459 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily Clo1313_1459 IPR019991 GTP-binding protein, ribosome biogenesis Clo1313_1459 IPR016478 GTPase, MTG1 Clo1313_1459 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_1459 IPR006073 GTP binding domain Clo1313_1461 IPR012337 Ribonuclease H-like superfamily Clo1313_1461 IPR036397 Ribonuclease H superfamily Clo1313_1461 IPR024567 Ribonuclease HII/HIII domain Clo1313_1461 IPR001352 Ribonuclease HII/HIII Clo1313_1461 IPR022898 Ribonuclease HII Clo1313_1464 IPR003509 Uncharacterised protein family UPF0102 Clo1313_1464 IPR011856 tRNA endonuclease-like domain superfamily Clo1313_1464 IPR011335 Restriction endonuclease type II-like Clo1313_1465 IPR010994 RuvA domain 2-like Clo1313_1465 IPR025657 RadC-like JAB domain Clo1313_1465 IPR037518 MPN domain Clo1313_1465 IPR001405 Uncharacterised protein family UPF0758 Clo1313_1465 IPR020891 Uncharacterised protein family UPF0758, conserved site Clo1313_1466 IPR032466 Metal-dependent hydrolase Clo1313_1466 IPR008257 Peptidase M19 Clo1313_1467 IPR004839 Aminotransferase, class I/classII Clo1313_1467 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site Clo1313_1467 IPR015424 Pyridoxal phosphate-dependent transferase Clo1313_1467 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Clo1313_1467 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Clo1313_1472 IPR003593 AAA+ ATPase domain Clo1313_1472 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA Clo1313_1472 IPR003439 ABC transporter-like Clo1313_1472 IPR008995 Molybdate/tungstate binding, C-terminal Clo1313_1472 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_1472 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit Clo1313_1472 IPR013611 Transport-associated OB, type 2 Clo1313_1472 IPR017871 ABC transporter, conserved site Clo1313_1473 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Clo1313_1473 IPR035906 MetI-like superfamily Clo1313_1474 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Clo1313_1474 IPR035906 MetI-like superfamily Clo1313_1475 IPR006059 Bacterial extracellular solute-binding protein Clo1313_1475 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein Clo1313_1477 IPR008928 Six-hairpin glycosidase superfamily Clo1313_1477 IPR012341 Six-hairpin glycosidase-like superfamily Clo1313_1477 IPR001956 Carbohydrate-binding module 3 Clo1313_1477 IPR036966 Carbohydrate-binding module 3 superfamily Clo1313_1477 IPR002105 Dockerin type I repeat Clo1313_1477 IPR033126 Glycosyl hydrolases family 9, Asp/Glu active sites Clo1313_1477 IPR001701 Glycoside hydrolase family 9 Clo1313_1477 IPR036439 Dockerin domain superfamily Clo1313_1477 IPR016134 Dockerin domain Clo1313_1477 IPR018221 Glycoside hydrolase family 9, His active site Clo1313_1477 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clo1313_1478 IPR005151 Tail specific protease Clo1313_1478 IPR029045 ClpP/crotonase-like domain superfamily Clo1313_1478 IPR041489 PDZ domain 6 Clo1313_1478 IPR036034 PDZ superfamily Clo1313_1478 IPR004447 C-terminal-processing peptidase S41A Clo1313_1478 IPR002477 Peptidoglycan binding-like Clo1313_1478 IPR036365 PGBD-like superfamily Clo1313_1478 IPR036366 PGBD superfamily Clo1313_1478 IPR001478 PDZ domain Clo1313_1479 IPR002528 Multi antimicrobial extrusion protein Clo1313_1481 IPR004769 Adenylosuccinate lyase Clo1313_1481 IPR008948 L-Aspartase-like Clo1313_1481 IPR019468 Adenylosuccinate lyase C-terminal Clo1313_1481 IPR024083 Fumarase/histidase, N-terminal Clo1313_1481 IPR020557 Fumarate lyase, conserved site Clo1313_1481 IPR000362 Fumarate lyase family Clo1313_1481 IPR022761 Fumarate lyase, N-terminal Clo1313_1482 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Clo1313_1482 IPR036390 Winged helix DNA-binding domain superfamily Clo1313_1482 IPR000524 Transcription regulator HTH, GntR Clo1313_1482 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_1482 IPR011663 UbiC transcription regulator-associated Clo1313_1484 IPR017969 Heavy-metal-associated, conserved site Clo1313_1484 IPR006122 Heavy metal-associated domain, copper ion-binding Clo1313_1484 IPR006121 Heavy metal-associated domain, HMA Clo1313_1484 IPR036163 Heavy metal-associated domain superfamily Clo1313_1484 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ Clo1313_1486 IPR008278 4'-phosphopantetheinyl transferase domain Clo1313_1486 IPR004568 Phosphopantetheine-protein transferase domain Clo1313_1486 IPR037143 4'-phosphopantetheinyl transferase domain superfamily Clo1313_1487 IPR002102 Cellulosome anchoring protein, cohesin domain Clo1313_1487 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clo1313_1487 IPR001119 S-layer homology domain Clo1313_1488 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clo1313_1488 IPR001119 S-layer homology domain Clo1313_1488 IPR002102 Cellulosome anchoring protein, cohesin domain Clo1313_1491 IPR000453 Chorismate synthase Clo1313_1491 IPR035904 Chorismate synthase AroC superfamily Clo1313_1491 IPR020541 Chorismate synthase, conserved site Clo1313_1492 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_1492 IPR031322 Shikimate kinase/gluconokinase Clo1313_1492 IPR000623 Shikimate kinase/Threonine synthase-like 1 Clo1313_1494 IPR012341 Six-hairpin glycosidase-like superfamily Clo1313_1494 IPR019834 Glycoside hydrolase, family 8, conserved site Clo1313_1494 IPR008928 Six-hairpin glycosidase superfamily Clo1313_1494 IPR002037 Glycoside hydrolase, family 8 Clo1313_1494 IPR018247 EF-Hand 1, calcium-binding site Clo1313_1494 IPR002105 Dockerin type I repeat Clo1313_1494 IPR016134 Dockerin domain Clo1313_1494 IPR036439 Dockerin domain superfamily Clo1313_1495 IPR011010 DNA breaking-rejoining enzyme, catalytic core Clo1313_1495 IPR013762 Integrase-like, catalytic domain superfamily Clo1313_1495 IPR002104 Integrase, catalytic domain Clo1313_1495 IPR010998 Integrase/recombinase, N-terminal Clo1313_1495 IPR004107 Integrase, SAM-like, N-terminal Clo1313_1497 IPR023358 Peptidase M18, domain 2 Clo1313_1497 IPR001948 Peptidase M18 Clo1313_1497 IPR022983 M18 family aminopeptidase 1, putative Clo1313_1498 IPR000160 GGDEF domain Clo1313_1498 IPR003607 HD/PDEase domain Clo1313_1498 IPR006674 HD domain Clo1313_1498 IPR037522 HD-GYP domain Clo1313_1498 IPR029787 Nucleotide cyclase Clo1313_1499 IPR016195 Polymerase/histidinol phosphatase-like Clo1313_1499 IPR010140 Histidinol phosphate phosphatase, HisJ Clo1313_1500 IPR002307 Tyrosine-tRNA ligase Clo1313_1500 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site Clo1313_1500 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 Clo1313_1500 IPR002305 Aminoacyl-tRNA synthetase, class Ic Clo1313_1500 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clo1313_1500 IPR024088 Tyrosine-tRNA ligase, bacterial-type Clo1313_1500 IPR002942 RNA-binding S4 domain Clo1313_1500 IPR036986 RNA-binding S4 domain superfamily Clo1313_1501 IPR004506 tRNA-specific 2-thiouridylase Clo1313_1501 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clo1313_1501 IPR023382 Adenine nucleotide alpha hydrolase-like domains Clo1313_1502 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal Clo1313_1503 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Clo1313_1503 IPR015424 Pyridoxal phosphate-dependent transferase Clo1313_1503 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site Clo1313_1503 IPR000192 Aminotransferase class V domain Clo1313_1503 IPR016454 Cysteine desulfurase Clo1313_1503 IPR017772 Cysteine desulfurase NifS, bacterial/archaeal Clo1313_1503 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Clo1313_1503 IPR010240 Cysteine desulfurase IscS Clo1313_1504 IPR000944 Transcription regulator Rrf2-type Clo1313_1504 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_1504 IPR036390 Winged helix DNA-binding domain superfamily Clo1313_1504 IPR030489 Transcription regulator Rrf2-type, conserved site Clo1313_1507 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clo1313_1507 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal Clo1313_1507 IPR000780 MCP methyltransferase, CheR-type Clo1313_1507 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal Clo1313_1508 IPR001564 Nucleoside diphosphate kinase Clo1313_1508 IPR036850 Nucleoside diphosphate kinase-like domain superfamily Clo1313_1508 IPR034907 Nucleoside diphosphate kinase-like domain Clo1313_1509 IPR017716 S-adenosylmethionine decarboxylase proenzyme Clo1313_1509 IPR016067 S-adenosylmethionine decarboxylase, core Clo1313_1509 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic Clo1313_1510 IPR003029 S1 domain Clo1313_1510 IPR012340 Nucleic acid-binding, OB-fold Clo1313_1510 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase Clo1313_1510 IPR022967 RNA-binding domain, S1 Clo1313_1511 IPR002123 Phospholipid/glycerol acyltransferase Clo1313_1511 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase Clo1313_1512 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_1512 IPR011994 Cytidylate kinase domain Clo1313_1512 IPR003136 Cytidylate kinase Clo1313_1516 IPR023166 HI0933-like insert domain superfamily Clo1313_1516 IPR036188 FAD/NAD(P)-binding domain superfamily Clo1313_1516 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like Clo1313_1517 IPR029033 Histidine phosphatase superfamily Clo1313_1517 IPR013078 Histidine phosphatase superfamily, clade-1 Clo1313_1518 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_1518 IPR009057 Homeobox-like domain superfamily Clo1313_1518 IPR035472 RpiR-like, SIS domain Clo1313_1518 IPR000281 Helix-turn-helix protein RpiR Clo1313_1518 IPR001347 Sugar isomerase (SIS) Clo1313_1523 IPR013785 Aldolase-type TIM barrel Clo1313_1523 IPR001882 Biotin-binding site Clo1313_1523 IPR000089 Biotin/lipoyl attachment Clo1313_1523 IPR003379 Carboxylase, conserved domain Clo1313_1523 IPR005776 Oxaloacetate decarboxylase, alpha subunit Clo1313_1523 IPR000891 Pyruvate carboxyltransferase Clo1313_1523 IPR011053 Single hybrid motif Clo1313_1524 IPR000089 Biotin/lipoyl attachment Clo1313_1524 IPR001882 Biotin-binding site Clo1313_1524 IPR011053 Single hybrid motif Clo1313_1526 IPR034733 Acetyl-CoA carboxylase Clo1313_1526 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit Clo1313_1526 IPR029045 ClpP/crotonase-like domain superfamily Clo1313_1526 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal Clo1313_1526 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal Clo1313_1528 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clo1313_1528 IPR010719 Putative rRNA methylase Clo1313_1529 IPR005925 Agmatinase-related Clo1313_1529 IPR006035 Ureohydrolase Clo1313_1529 IPR023696 Ureohydrolase domain superfamily Clo1313_1529 IPR020855 Ureohydrolase, manganese-binding site Clo1313_1530 IPR030373 Polyamine biosynthesis domain, conserved site Clo1313_1530 IPR035246 Spermidine synthase, tetramerisation domain Clo1313_1530 IPR037163 Spermidine synthase, tetramerisation domain superfamily Clo1313_1530 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clo1313_1530 IPR001045 Spermidine/spermine synthases Clo1313_1530 IPR030374 Polyamine biosynthesis domain Clo1313_1531 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F Clo1313_1531 IPR036986 RNA-binding S4 domain superfamily Clo1313_1531 IPR002942 RNA-binding S4 domain Clo1313_1531 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site Clo1313_1531 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain Clo1313_1531 IPR020103 Pseudouridine synthase, catalytic domain superfamily Clo1313_1531 IPR006145 Pseudouridine synthase, RsuA/RluA Clo1313_1532 IPR014229 Sporulation protein YtfJ Clo1313_1535 IPR036390 Winged helix DNA-binding domain superfamily Clo1313_1535 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_1535 IPR005234 Chromosome segregation/condensation protein ScpB Clo1313_1536 IPR003768 Segregation and condensation protein A Clo1313_1537 IPR002306 Tryptophan-tRNA ligase Clo1313_1537 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clo1313_1537 IPR002305 Aminoacyl-tRNA synthetase, class Ic Clo1313_1537 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site Clo1313_1538 IPR008915 Peptidase M50 Clo1313_1539 IPR003156 DHHA1 domain Clo1313_1539 IPR000644 CBS domain Clo1313_1539 IPR001667 DDH domain Clo1313_1539 IPR038763 DHH phosphoesterase superfamily Clo1313_1539 IPR002646 Poly A polymerase, head domain Clo1313_1539 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Clo1313_1540 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Clo1313_1540 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal Clo1313_1540 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal Clo1313_1540 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal Clo1313_1540 IPR002986 Diaminopimelate decarboxylase, LysA Clo1313_1540 IPR000183 Ornithine/DAP/Arg decarboxylase Clo1313_1540 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Clo1313_1540 IPR029066 PLP-binding barrel Clo1313_1542 IPR005990 Inosine-5'-monophosphate dehydrogenase Clo1313_1542 IPR000644 CBS domain Clo1313_1542 IPR015875 IMP dehydrogenase / GMP reductase, conserved site Clo1313_1542 IPR001093 IMP dehydrogenase/GMP reductase Clo1313_1542 IPR013785 Aldolase-type TIM barrel Clo1313_1544 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal Clo1313_1544 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily Clo1313_1544 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal Clo1313_1544 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A Clo1313_1544 IPR015956 Penicillin-binding protein, C-terminal domain superfamily Clo1313_1544 IPR012338 Beta-lactamase/transpeptidase-like Clo1313_1545 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal Clo1313_1545 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase Clo1313_1545 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily Clo1313_1545 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Clo1313_1545 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Clo1313_1545 IPR017459 Glycosyl transferase family 3, N-terminal domain Clo1313_1545 IPR000312 Glycosyl transferase, family 3 Clo1313_1545 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic Clo1313_1545 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site Clo1313_1546 IPR024052 Phosphopentomutase DeoB cap domain superfamily Clo1313_1546 IPR017850 Alkaline-phosphatase-like, core domain superfamily Clo1313_1546 IPR006124 Metalloenzyme Clo1313_1546 IPR010045 Phosphopentomutase Clo1313_1547 IPR011010 DNA breaking-rejoining enzyme, catalytic core Clo1313_1547 IPR013762 Integrase-like, catalytic domain superfamily Clo1313_1547 IPR002104 Integrase, catalytic domain Clo1313_1547 IPR010998 Integrase/recombinase, N-terminal Clo1313_1547 IPR004107 Integrase, SAM-like, N-terminal Clo1313_1547 IPR023009 Tyrosine recombinase XerC/XerD Clo1313_1547 IPR011932 Tyrosine recombinase XerD Clo1313_1548 IPR014196 Stage II sporulation protein M Clo1313_1548 IPR002798 Stage II sporulation protein M-like Clo1313_1549 IPR020084 NUDIX hydrolase, conserved site Clo1313_1549 IPR000086 NUDIX hydrolase domain Clo1313_1549 IPR015797 NUDIX hydrolase-like domain superfamily Clo1313_1549 IPR004385 Nucleoside diphosphate pyrophosphatase Clo1313_1550 IPR012337 Ribonuclease H-like superfamily Clo1313_1550 IPR002156 Ribonuclease H domain Clo1313_1550 IPR036397 Ribonuclease H superfamily Clo1313_1550 IPR022892 Ribonuclease HI Clo1313_1551 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily Clo1313_1551 IPR036291 NAD(P)-binding domain superfamily Clo1313_1551 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal Clo1313_1551 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain Clo1313_1551 IPR000304 Pyrroline-5-carboxylate reductase Clo1313_1557 IPR004995 Bacillus/Clostridium Ger spore germination protein Clo1313_1558 IPR001107 Band 7 domain Clo1313_1558 IPR010200 HflC Clo1313_1558 IPR036013 Band 7/SPFH domain superfamily Clo1313_1559 IPR010201 HflK Clo1313_1559 IPR001107 Band 7 domain Clo1313_1559 IPR036013 Band 7/SPFH domain superfamily Clo1313_1560 IPR036908 RlpA-like domain superfamily Clo1313_1560 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 Clo1313_1560 IPR010611 3D domain Clo1313_1560 IPR011098 G5 domain Clo1313_1563 IPR016134 Dockerin domain Clo1313_1563 IPR002105 Dockerin type I repeat Clo1313_1563 IPR008264 Beta-glucanase Clo1313_1563 IPR008263 Glycoside hydrolase, family 16, active site Clo1313_1563 IPR000757 Glycoside hydrolase family 16 Clo1313_1563 IPR018247 EF-Hand 1, calcium-binding site Clo1313_1563 IPR036439 Dockerin domain superfamily Clo1313_1563 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Clo1313_1564 IPR018247 EF-Hand 1, calcium-binding site Clo1313_1564 IPR015943 WD40/YVTN repeat-like-containing domain superfamily Clo1313_1564 IPR002105 Dockerin type I repeat Clo1313_1564 IPR016134 Dockerin domain Clo1313_1564 IPR036439 Dockerin domain superfamily Clo1313_1570 IPR015424 Pyridoxal phosphate-dependent transferase Clo1313_1570 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Clo1313_1570 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Clo1313_1570 IPR010970 Cysteine desulfurase, SufS Clo1313_1570 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site Clo1313_1570 IPR000192 Aminotransferase class V domain Clo1313_1570 IPR016454 Cysteine desulfurase Clo1313_1571 IPR034428 ThiH/NocL/HydG-like Clo1313_1571 IPR012726 Thiazole biosynthesis ThiH Clo1313_1571 IPR007197 Radical SAM Clo1313_1571 IPR010722 Biotin and thiamin synthesis-associated domain Clo1313_1571 IPR013785 Aldolase-type TIM barrel Clo1313_1573 IPR017284 Tautomerase PptA Clo1313_1573 IPR004370 4-oxalocrotonate tautomerase Clo1313_1573 IPR014347 Tautomerase/MIF superfamily Clo1313_1578 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clo1313_1578 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding Clo1313_1578 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 Clo1313_1578 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site Clo1313_1578 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial Clo1313_1578 IPR000924 Glutamyl/glutaminyl-tRNA synthetase Clo1313_1578 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain Clo1313_1581 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily Clo1313_1581 IPR036589 Homocysteine-binding domain superfamily Clo1313_1581 IPR003726 Homocysteine-binding domain Clo1313_1581 IPR036594 Methionine synthase domain Clo1313_1581 IPR011822 Cobalamin-dependent methionine synthase Clo1313_1581 IPR033706 Methionine synthase, B12-binding domain Clo1313_1581 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Clo1313_1581 IPR006158 Cobalamin (vitamin B12)-binding domain Clo1313_1581 IPR036724 Cobalamin-binding domain superfamily Clo1313_1581 IPR011005 Dihydropteroate synthase-like Clo1313_1581 IPR000489 Pterin-binding domain Clo1313_1581 IPR004223 Vitamin B12-dependent methionine synthase, activation domain Clo1313_1583 IPR038728 Uncharacterized membrane protein YkvI Clo1313_1587 IPR000757 Glycoside hydrolase family 16 Clo1313_1587 IPR008263 Glycoside hydrolase, family 16, active site Clo1313_1587 IPR018247 EF-Hand 1, calcium-binding site Clo1313_1587 IPR036439 Dockerin domain superfamily Clo1313_1587 IPR016134 Dockerin domain Clo1313_1587 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Clo1313_1587 IPR002105 Dockerin type I repeat Clo1313_1587 IPR008264 Beta-glucanase Clo1313_1588 IPR014756 Immunoglobulin E-set Clo1313_1588 IPR013783 Immunoglobulin-like fold Clo1313_1588 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta Clo1313_1588 IPR013780 Glycosyl hydrolase, all-beta Clo1313_1588 IPR004193 Glycoside hydrolase, family 13, N-terminal Clo1313_1588 IPR037439 1,4-alpha-glucan-branching enzyme Clo1313_1588 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB Clo1313_1588 IPR006047 Glycosyl hydrolase, family 13, catalytic domain Clo1313_1588 IPR017853 Glycoside hydrolase superfamily Clo1313_1589 IPR008984 SMAD/FHA domain superfamily Clo1313_1589 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_1589 IPR002543 FtsK domain Clo1313_1589 IPR022206 Firmicutes EssC, N-terminal Clo1313_1589 IPR023839 Firmicutes EssC, C-terminal Clo1313_1592 IPR015655 Protein phosphatase 2C family Clo1313_1592 IPR036457 PPM-type phosphatase domain superfamily Clo1313_1592 IPR001932 PPM-type phosphatase domain Clo1313_1593 IPR000719 Protein kinase domain Clo1313_1593 IPR017441 Protein kinase, ATP binding site Clo1313_1593 IPR008271 Serine/threonine-protein kinase, active site Clo1313_1593 IPR005543 PASTA domain Clo1313_1593 IPR011009 Protein kinase-like domain superfamily Clo1313_1599 IPR001482 Type II/IV secretion system protein Clo1313_1599 IPR013374 ATPase, type IV, pilus assembly, PilB Clo1313_1599 IPR007831 General secretory system II, protein E, N-terminal Clo1313_1599 IPR037257 General secretory system II, protein E, N-terminal superfamily Clo1313_1599 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_1599 IPR003593 AAA+ ATPase domain Clo1313_1603 IPR018221 Glycoside hydrolase family 9, His active site Clo1313_1603 IPR018247 EF-Hand 1, calcium-binding site Clo1313_1603 IPR036439 Dockerin domain superfamily Clo1313_1603 IPR016134 Dockerin domain Clo1313_1603 IPR002105 Dockerin type I repeat Clo1313_1603 IPR036966 Carbohydrate-binding module 3 superfamily Clo1313_1603 IPR001956 Carbohydrate-binding module 3 Clo1313_1603 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clo1313_1603 IPR012341 Six-hairpin glycosidase-like superfamily Clo1313_1603 IPR008928 Six-hairpin glycosidase superfamily Clo1313_1603 IPR033126 Glycosyl hydrolases family 9, Asp/Glu active sites Clo1313_1603 IPR001701 Glycoside hydrolase family 9 Clo1313_1604 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clo1313_1604 IPR001956 Carbohydrate-binding module 3 Clo1313_1604 IPR036966 Carbohydrate-binding module 3 superfamily Clo1313_1604 IPR024745 Glycoside hydrolase, family 44 Clo1313_1604 IPR013780 Glycosyl hydrolase, all-beta Clo1313_1604 IPR017853 Glycoside hydrolase superfamily Clo1313_1605 IPR037187 DksA, N-terminal domain superfamily Clo1313_1605 IPR000962 Zinc finger, DksA/TraR C4-type Clo1313_1605 IPR014240 Regulatory protein, YteA family Clo1313_1606 IPR000845 Nucleoside phosphorylase domain Clo1313_1606 IPR035994 Nucleoside phosphorylase superfamily Clo1313_1606 IPR010044 Methylthioadenosine phosphorylase (MTAP) Clo1313_1607 IPR000649 Initiation factor 2B-related Clo1313_1607 IPR005251 Methylthioribose-1-phosphate isomerase Clo1313_1607 IPR011559 Initiation factor 2B alpha/beta/delta Clo1313_1607 IPR027363 Methylthioribose-1-phosphate isomerase, N-terminal Clo1313_1607 IPR037171 NagB/RpiA transferase-like Clo1313_1608 IPR022687 DTXR-type HTH domain Clo1313_1608 IPR001367 Iron dependent repressor, metal binding and dimerisation domain Clo1313_1608 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily Clo1313_1608 IPR022689 Iron dependent repressor Clo1313_1608 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_1608 IPR036390 Winged helix DNA-binding domain superfamily Clo1313_1610 IPR005225 Small GTP-binding protein domain Clo1313_1610 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_1610 IPR006073 GTP binding domain Clo1313_1610 IPR008988 Transcriptional repressor, C-terminal Clo1313_1610 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Clo1313_1610 IPR007167 Ferrous iron transporter FeoA domain Clo1313_1610 IPR041069 FeoB, cytosolic helical domain Clo1313_1610 IPR038157 Ferrous iron transporter, core domain Clo1313_1610 IPR011640 Ferrous iron transport protein B, C-terminal Clo1313_1610 IPR003373 Ferrous iron transport protein B Clo1313_1610 IPR030389 FeoB-type guanine nucleotide-binding (G) domain Clo1313_1612 IPR021886 MgsA AAA+ ATPase C-terminal Clo1313_1612 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal Clo1313_1612 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_1612 IPR032423 AAA C-terminal domain Clo1313_1612 IPR003593 AAA+ ATPase domain Clo1313_1612 IPR003959 ATPase, AAA-type, core Clo1313_1614 IPR028154 AMP-dependent ligase, C-terminal Clo1313_1614 IPR000873 AMP-dependent synthetase/ligase Clo1313_1614 IPR042099 AMP-dependent synthetase-like superfamily Clo1313_1614 IPR011880 Phenylacetate-CoA ligase Clo1313_1616 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clo1313_1616 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clo1313_1617 IPR038377 Sodium/glucose symporter superfamily Clo1313_1617 IPR011851 Sodium/proline symporter Clo1313_1617 IPR001734 Sodium/solute symporter Clo1313_1617 IPR018212 Sodium/solute symporter, conserved site Clo1313_1618 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain Clo1313_1618 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Clo1313_1618 IPR022712 Beta-Casp domain Clo1313_1618 IPR001279 Metallo-beta-lactamase Clo1313_1619 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site Clo1313_1619 IPR004839 Aminotransferase, class I/classII Clo1313_1619 IPR005861 Histidinol-phosphate aminotransferase family Clo1313_1619 IPR015424 Pyridoxal phosphate-dependent transferase Clo1313_1619 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Clo1313_1619 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Clo1313_1620 IPR008007 Peptidase M42 Clo1313_1620 IPR023367 Peptidase M42, domain 2 Clo1313_1621 IPR008007 Peptidase M42 Clo1313_1621 IPR023367 Peptidase M42, domain 2 Clo1313_1622 IPR008007 Peptidase M42 Clo1313_1622 IPR023367 Peptidase M42, domain 2 Clo1313_1624 IPR038765 Papain-like cysteine peptidase superfamily Clo1313_1624 IPR000064 Endopeptidase, NLPC/P60 domain Clo1313_1627 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B Clo1313_1627 IPR037509 Phosphomethylpyrimidine synthase Clo1313_1627 IPR038521 ThiC/Bza superfamily Clo1313_1628 IPR013785 Aldolase-type TIM barrel Clo1313_1628 IPR036206 Thiamin phosphate synthase superfamily Clo1313_1628 IPR022998 Thiamine phosphate synthase/TenI Clo1313_1628 IPR034291 Thiamine phosphate synthase Clo1313_1629 IPR000594 THIF-type NAD/FAD binding fold Clo1313_1629 IPR035985 Ubiquitin-activating enzyme Clo1313_1629 IPR036873 Rhodanese-like domain superfamily Clo1313_1629 IPR001763 Rhodanese-like domain Clo1313_1630 IPR013785 Aldolase-type TIM barrel Clo1313_1630 IPR010722 Biotin and thiamin synthesis-associated domain Clo1313_1630 IPR007197 Radical SAM Clo1313_1630 IPR012726 Thiazole biosynthesis ThiH Clo1313_1630 IPR034428 ThiH/NocL/HydG-like Clo1313_1631 IPR008867 Thiazole synthase Clo1313_1631 IPR013785 Aldolase-type TIM barrel Clo1313_1631 IPR033983 Thiazole synthase ThiG Clo1313_1632 IPR008867 Thiazole synthase Clo1313_1632 IPR033983 Thiazole synthase ThiG Clo1313_1632 IPR003749 Sulfur carrier ThiS/MoaD-like Clo1313_1632 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp Clo1313_1632 IPR010035 ThiS, thiamine-biosynthesis Clo1313_1632 IPR013785 Aldolase-type TIM barrel Clo1313_1632 IPR012675 Beta-grasp domain superfamily Clo1313_1633 IPR030393 EngB-type guanine nucleotide-binding (G) domain Clo1313_1633 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC Clo1313_1633 IPR006073 GTP binding domain Clo1313_1633 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_1638 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clo1313_1638 IPR041698 Methyltransferase domain 25 Clo1313_1643 IPR025827 Recombinase zinc beta ribbon domain Clo1313_1643 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily Clo1313_1643 IPR006119 Resolvase, N-terminal catalytic domain Clo1313_1643 IPR038109 DNA-binding recombinase domain superfamily Clo1313_1643 IPR011109 DNA-binding recombinase domain Clo1313_1645 IPR014001 Helicase superfamily 1/2, ATP-binding domain Clo1313_1645 IPR003593 AAA+ ATPase domain Clo1313_1645 IPR013701 DEAD/H associated Clo1313_1645 IPR011545 DEAD/DEAH box helicase domain Clo1313_1645 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_1645 IPR001650 Helicase, C-terminal Clo1313_1648 IPR006120 Resolvase, HTH domain Clo1313_1648 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily Clo1313_1648 IPR006119 Resolvase, N-terminal catalytic domain Clo1313_1648 IPR006118 Recombinase, conserved site Clo1313_1648 IPR009057 Homeobox-like domain superfamily Clo1313_1654 IPR003593 AAA+ ATPase domain Clo1313_1654 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_1654 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Clo1313_1654 IPR025944 Sigma-54 interaction domain, conserved site Clo1313_1654 IPR011006 CheY-like superfamily Clo1313_1654 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Clo1313_1654 IPR002078 RNA polymerase sigma factor 54 interaction domain Clo1313_1654 IPR001789 Signal transduction response regulator, receiver domain Clo1313_1654 IPR009057 Homeobox-like domain superfamily Clo1313_1655 IPR000014 PAS domain Clo1313_1655 IPR000700 PAS-associated, C-terminal Clo1313_1655 IPR001610 PAC motif Clo1313_1655 IPR035965 PAS domain superfamily Clo1313_1655 IPR013656 PAS fold-4 Clo1313_1655 IPR013655 PAS fold-3 Clo1313_1655 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Clo1313_1655 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Clo1313_1655 IPR005467 Histidine kinase domain Clo1313_1655 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clo1313_1655 IPR003594 Histidine kinase/HSP90-like ATPase Clo1313_1655 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Clo1313_1656 IPR008532 NFACT, RNA-binding domain Clo1313_1657 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Clo1313_1657 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Clo1313_1657 IPR015424 Pyridoxal phosphate-dependent transferase Clo1313_1657 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site Clo1313_1657 IPR004839 Aminotransferase, class I/classII Clo1313_1658 IPR000415 Nitroreductase-like Clo1313_1658 IPR026021 Putative NAD(P)H nitroreductase YdjA-like Clo1313_1658 IPR029479 Nitroreductase Clo1313_1659 IPR033126 Glycosyl hydrolases family 9, Asp/Glu active sites Clo1313_1659 IPR036966 Carbohydrate-binding module 3 superfamily Clo1313_1659 IPR001701 Glycoside hydrolase family 9 Clo1313_1659 IPR001956 Carbohydrate-binding module 3 Clo1313_1659 IPR014756 Immunoglobulin E-set Clo1313_1659 IPR008928 Six-hairpin glycosidase superfamily Clo1313_1659 IPR005102 Carbohydrate binding X2 domain Clo1313_1659 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clo1313_1659 IPR013783 Immunoglobulin-like fold Clo1313_1659 IPR018221 Glycoside hydrolase family 9, His active site Clo1313_1659 IPR012341 Six-hairpin glycosidase-like superfamily Clo1313_1661 IPR013785 Aldolase-type TIM barrel Clo1313_1661 IPR026019 Ribulose-phosphate 3-epimerase Clo1313_1661 IPR000056 Ribulose-phosphate 3-epimerase-like Clo1313_1661 IPR011060 Ribulose-phosphate binding barrel Clo1313_1662 IPR010914 RsgA GTPase domain Clo1313_1662 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain Clo1313_1662 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_1662 IPR031944 Ribosome biogenesis GTPase RsgA, N-terminal Clo1313_1662 IPR012340 Nucleic acid-binding, OB-fold Clo1313_1662 IPR004881 Ribosome biogenesis GTPase RsgA Clo1313_1663 IPR011009 Protein kinase-like domain superfamily Clo1313_1663 IPR017441 Protein kinase, ATP binding site Clo1313_1663 IPR000719 Protein kinase domain Clo1313_1663 IPR005543 PASTA domain Clo1313_1663 IPR008271 Serine/threonine-protein kinase, active site Clo1313_1664 IPR001932 PPM-type phosphatase domain Clo1313_1664 IPR036457 PPM-type phosphatase domain superfamily Clo1313_1664 IPR015655 Protein phosphatase 2C family Clo1313_1665 IPR006638 Elp3/MiaB/NifB Clo1313_1665 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr Clo1313_1665 IPR007197 Radical SAM Clo1313_1665 IPR013785 Aldolase-type TIM barrel Clo1313_1665 IPR027492 Dual-specificity RNA methyltransferase RlmN Clo1313_1665 IPR040072 Methyltransferase (Class A) Clo1313_1666 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site Clo1313_1666 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type Clo1313_1666 IPR035926 NusB-like superfamily Clo1313_1666 IPR006027 NusB/RsmB/TIM44 Clo1313_1666 IPR023267 RNA (C5-cytosine) methyltransferase Clo1313_1666 IPR004573 rRNA small subunit methyltransferase B Clo1313_1666 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clo1313_1667 IPR007395 Putative neutral zinc metallopeptidase Clo1313_1669 IPR005793 Formyl transferase, C-terminal Clo1313_1669 IPR002376 Formyl transferase, N-terminal Clo1313_1669 IPR005794 Methionyl-tRNA formyltransferase Clo1313_1669 IPR036477 Formyl transferase, N-terminal domain superfamily Clo1313_1669 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain Clo1313_1669 IPR001555 Phosphoribosylglycinamide formyltransferase, active site Clo1313_1669 IPR011034 Formyl transferase-like, C-terminal domain superfamily Clo1313_1670 IPR023635 Peptide deformylase Clo1313_1670 IPR036821 Peptide deformylase superfamily Clo1313_1671 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain Clo1313_1671 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily Clo1313_1671 IPR041222 Primosomal protein N', 3' DNA-binding domain Clo1313_1671 IPR041236 Primosomal protein N, C-terminal domain Clo1313_1671 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_1671 IPR001650 Helicase, C-terminal Clo1313_1671 IPR014001 Helicase superfamily 1/2, ATP-binding domain Clo1313_1671 IPR006935 Helicase/UvrB, N-terminal Clo1313_1671 IPR005259 Primosomal protein N' Clo1313_1673 IPR014119 Heptaprenyl diphosphate synthase component II Clo1313_1673 IPR008949 Isoprenoid synthase domain superfamily Clo1313_1673 IPR000092 Polyprenyl synthetase Clo1313_1673 IPR033749 Polyprenyl synthetase, conserved site Clo1313_1676 IPR024932 Flavin transferase ApbE Clo1313_1676 IPR003374 ApbE-like superfamily Clo1313_1676 IPR042159 Flavin-trafficking protein ApbE Clo1313_1677 IPR036188 FAD/NAD(P)-binding domain superfamily Clo1313_1677 IPR023753 FAD/NAD(P)-binding domain Clo1313_1680 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel Clo1313_1680 IPR002509 NodB homology domain Clo1313_1680 IPR014132 Sporulation polysaccharide deacetylase, PdaB Clo1313_1681 IPR006426 Asparagine synthase, glutamine-hydrolyzing Clo1313_1681 IPR029055 Nucleophile aminohydrolases, N-terminal Clo1313_1681 IPR001962 Asparagine synthase Clo1313_1681 IPR033738 Asparagine synthase, N-terminal domain Clo1313_1681 IPR017932 Glutamine amidotransferase type 2 domain Clo1313_1682 IPR023059 Foldase protein PrsA Clo1313_1682 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type Clo1313_1682 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Clo1313_1682 IPR008880 Trigger factor, C-terminal Clo1313_1682 IPR027304 Trigger factor/SurA domain superfamily Clo1313_1682 IPR037041 Trigger factor, C-terminal domain superfamily Clo1313_1683 IPR010074 Phosphoribosylformylglycinamidine subunit PurL Clo1313_1683 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain Clo1313_1683 IPR010918 PurM-like, C-terminal domain Clo1313_1683 IPR036676 PurM-like, C-terminal domain superfamily Clo1313_1683 IPR016188 PurM-like, N-terminal domain Clo1313_1683 IPR036921 PurM-like, N-terminal domain superfamily Clo1313_1684 IPR036390 Winged helix DNA-binding domain superfamily Clo1313_1684 IPR037403 HTH-type transcriptional regulator CynR, PBP2 domain Clo1313_1684 IPR005119 LysR, substrate-binding Clo1313_1684 IPR000847 Transcription regulator HTH, LysR Clo1313_1684 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_1686 IPR025110 AMP-binding enzyme, C-terminal domain Clo1313_1686 IPR020845 AMP-binding, conserved site Clo1313_1686 IPR000873 AMP-dependent synthetase/ligase Clo1313_1686 IPR042099 AMP-dependent synthetase-like superfamily Clo1313_1687 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clo1313_1687 IPR001404 Heat shock protein Hsp90 family Clo1313_1687 IPR020568 Ribosomal protein S5 domain 2-type fold Clo1313_1687 IPR020575 Heat shock protein Hsp90, N-terminal Clo1313_1687 IPR019805 Heat shock protein Hsp90, conserved site Clo1313_1688 IPR037294 ABC transporter, BtuC-like Clo1313_1688 IPR001626 ABC transporter, TroCD-like Clo1313_1689 IPR003593 AAA+ ATPase domain Clo1313_1689 IPR003439 ABC transporter-like Clo1313_1689 IPR017871 ABC transporter, conserved site Clo1313_1689 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_1690 IPR006129 Adhesin B Clo1313_1690 IPR006127 Periplasmic solute binding protein, ZnuA-like Clo1313_1690 IPR006128 Adhesion lipoprotein Clo1313_1691 IPR036390 Winged helix DNA-binding domain superfamily Clo1313_1691 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_1691 IPR002481 Ferric-uptake regulator Clo1313_1693 IPR001932 PPM-type phosphatase domain Clo1313_1693 IPR036457 PPM-type phosphatase domain superfamily Clo1313_1693 IPR015655 Protein phosphatase 2C family Clo1313_1694 IPR001956 Carbohydrate-binding module 3 Clo1313_1694 IPR001701 Glycoside hydrolase family 9 Clo1313_1694 IPR018247 EF-Hand 1, calcium-binding site Clo1313_1694 IPR036439 Dockerin domain superfamily Clo1313_1694 IPR016134 Dockerin domain Clo1313_1694 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clo1313_1694 IPR036966 Carbohydrate-binding module 3 superfamily Clo1313_1694 IPR018221 Glycoside hydrolase family 9, His active site Clo1313_1694 IPR012341 Six-hairpin glycosidase-like superfamily Clo1313_1694 IPR008928 Six-hairpin glycosidase superfamily Clo1313_1694 IPR002105 Dockerin type I repeat Clo1313_1694 IPR033126 Glycosyl hydrolases family 9, Asp/Glu active sites Clo1313_1696 IPR000587 Creatinase, N-terminal Clo1313_1696 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Clo1313_1696 IPR036005 Creatinase/aminopeptidase-like Clo1313_1696 IPR000994 Peptidase M24 Clo1313_1696 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site Clo1313_1697 IPR017871 ABC transporter, conserved site Clo1313_1697 IPR025857 MacB-like periplasmic core domain Clo1313_1697 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_1697 IPR017911 ABC transporter, macrolide export, ATP-binding domain Clo1313_1697 IPR003439 ABC transporter-like Clo1313_1697 IPR003593 AAA+ ATPase domain Clo1313_1698 IPR003593 AAA+ ATPase domain Clo1313_1698 IPR003439 ABC transporter-like Clo1313_1698 IPR017871 ABC transporter, conserved site Clo1313_1698 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_1699 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Clo1313_1699 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Clo1313_1699 IPR005467 Histidine kinase domain Clo1313_1699 IPR003594 Histidine kinase/HSP90-like ATPase Clo1313_1699 IPR003660 HAMP domain Clo1313_1699 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Clo1313_1699 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clo1313_1700 IPR001789 Signal transduction response regulator, receiver domain Clo1313_1700 IPR016032 Signal transduction response regulator, C-terminal effector Clo1313_1700 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_1700 IPR001867 OmpR/PhoB-type DNA-binding domain Clo1313_1700 IPR011006 CheY-like superfamily Clo1313_1700 IPR039420 Transcriptional regulatory protein WalR-like Clo1313_1701 IPR018247 EF-Hand 1, calcium-binding site Clo1313_1701 IPR016134 Dockerin domain Clo1313_1701 IPR036439 Dockerin domain superfamily Clo1313_1701 IPR001547 Glycoside hydrolase, family 5 Clo1313_1701 IPR018087 Glycoside hydrolase, family 5, conserved site Clo1313_1701 IPR017853 Glycoside hydrolase superfamily Clo1313_1701 IPR002105 Dockerin type I repeat Clo1313_1703 IPR011527 ABC transporter type 1, transmembrane domain Clo1313_1703 IPR005074 Peptidase C39, bacteriocin processing Clo1313_1703 IPR039421 Type I protein exporter Clo1313_1703 IPR017871 ABC transporter, conserved site Clo1313_1703 IPR003439 ABC transporter-like Clo1313_1703 IPR003593 AAA+ ATPase domain Clo1313_1703 IPR005897 Peptidase C39, ABC-type bacteriocin transporter Clo1313_1703 IPR036640 ABC transporter type 1, transmembrane domain superfamily Clo1313_1703 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_1708 IPR007921 CHAP domain Clo1313_1708 IPR018392 LysM domain Clo1313_1708 IPR038765 Papain-like cysteine peptidase superfamily Clo1313_1708 IPR036779 LysM domain superfamily Clo1313_1710 IPR002686 Transposase IS200-like Clo1313_1710 IPR036515 Transposase IS200-like superfamily Clo1313_1711 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Clo1313_1711 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Clo1313_1711 IPR003594 Histidine kinase/HSP90-like ATPase Clo1313_1711 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clo1313_1711 IPR005467 Histidine kinase domain Clo1313_1711 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Clo1313_1711 IPR000014 PAS domain Clo1313_1711 IPR035965 PAS domain superfamily Clo1313_1711 IPR013767 PAS fold Clo1313_1711 IPR031967 PhoR, single Cache-like domain Clo1313_1712 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit Clo1313_1715 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain Clo1313_1715 IPR029460 DNA polymerase, helix-hairpin-helix motif Clo1313_1715 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain Clo1313_1715 IPR013520 Exonuclease, RNase T/DNA polymerase III Clo1313_1715 IPR004013 PHP domain Clo1313_1715 IPR003141 Polymerase/histidinol phosphatase, N-terminal Clo1313_1715 IPR016195 Polymerase/histidinol phosphatase-like Clo1313_1715 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type Clo1313_1715 IPR012337 Ribonuclease H-like superfamily Clo1313_1715 IPR036397 Ribonuclease H superfamily Clo1313_1715 IPR040982 DNA polymerase III alpha subunit finger domain Clo1313_1716 IPR013785 Aldolase-type TIM barrel Clo1313_1716 IPR012838 Pyruvate formate-lyase 1 activating enzyme Clo1313_1716 IPR034465 Pyruvate formate-lyase activase Clo1313_1716 IPR001989 Radical-activating enzyme, conserved site Clo1313_1716 IPR007197 Radical SAM Clo1313_1716 IPR012839 Organic radical enzyme activase Clo1313_1716 IPR034457 Organic radical-activating enzymes Clo1313_1717 IPR005949 Formate acetyltransferase Clo1313_1717 IPR019777 Formate C-acetyltransferase glycine radical, conserved site Clo1313_1717 IPR001150 Glycine radical domain Clo1313_1717 IPR004184 Pyruvate formate lyase domain Clo1313_1718 IPR029052 Metallo-dependent phosphatase-like Clo1313_1718 IPR019079 Capsule synthesis protein, CapA Clo1313_1725 IPR014284 RNA polymerase sigma-70 like domain Clo1313_1725 IPR000943 RNA polymerase sigma-70 Clo1313_1725 IPR007627 RNA polymerase sigma-70 region 2 Clo1313_1725 IPR007624 RNA polymerase sigma-70 region 3 Clo1313_1725 IPR007630 RNA polymerase sigma-70 region 4 Clo1313_1725 IPR013324 RNA polymerase sigma factor, region 3/4-like Clo1313_1725 IPR012845 RNA polymerase sigma factor, FliA/WhiG Clo1313_1725 IPR013325 RNA polymerase sigma factor, region 2 Clo1313_1727 IPR005659 Chemoreceptor glutamine deamidase CheD Clo1313_1727 IPR038592 CheD-like superfamily Clo1313_1727 IPR011324 Cytotoxic necrotizing factor-like, catalytic Clo1313_1728 IPR028976 CheC-like superfamily Clo1313_1728 IPR007597 CheC-like protein Clo1313_1729 IPR039315 Chemotaxis protein CheW Clo1313_1729 IPR036061 CheW-like domain superfamily Clo1313_1729 IPR002545 CheW-like domain Clo1313_1730 IPR004105 Histidine kinase CheA-like, homodimeric domain Clo1313_1730 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily Clo1313_1730 IPR037052 Chemotaxis protein CheA, P2 response regulator-binding domain superfamily Clo1313_1730 IPR010808 Chemotaxis protein CheA, P2 response regulator-binding Clo1313_1730 IPR036061 CheW-like domain superfamily Clo1313_1730 IPR002545 CheW-like domain Clo1313_1730 IPR035891 CheY-binding domain of CheA Clo1313_1730 IPR003594 Histidine kinase/HSP90-like ATPase Clo1313_1730 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clo1313_1730 IPR005467 Histidine kinase domain Clo1313_1730 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Clo1313_1730 IPR036641 HPT domain superfamily Clo1313_1730 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Clo1313_1730 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Clo1313_1731 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase Clo1313_1731 IPR011006 CheY-like superfamily Clo1313_1731 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type Clo1313_1731 IPR001789 Signal transduction response regulator, receiver domain Clo1313_1731 IPR035909 Methylesterase CheB, C-terminal Clo1313_1733 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 Clo1313_1733 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_1733 IPR025501 ATP binding protein MinD Clo1313_1734 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain Clo1313_1734 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_1734 IPR020006 Flagellar biosynthesis protein FlhF Clo1313_1735 IPR042194 FHIPEP, domain 1 Clo1313_1735 IPR042193 FHIPEP, domain 3 Clo1313_1735 IPR042196 FHIPEP, domain 4 Clo1313_1735 IPR025505 FHIPEP conserved site Clo1313_1735 IPR006301 Flagellar biosynthesis protein FlhA Clo1313_1735 IPR001712 Type III secretion system FHIPEP Clo1313_1736 IPR006136 Flagellar biosynthetic protein FlhB Clo1313_1736 IPR006135 Type III secretion system substrate exporter Clo1313_1736 IPR029025 Type III secretion system substrate exporter, C-terminal Clo1313_1737 IPR006303 Flagellar biosynthesis protein FliR Clo1313_1737 IPR002010 Type III secretion system inner membrane R protein Clo1313_1738 IPR006305 Flagellar biosynthesis protein FliQ Clo1313_1738 IPR002191 Bacterial export protein family 3 Clo1313_1739 IPR005838 Type III secretion system inner membrane P protein Clo1313_1739 IPR005837 Flagellar transport protein FliP Clo1313_1741 IPR011006 CheY-like superfamily Clo1313_1741 IPR001789 Signal transduction response regulator, receiver domain Clo1313_1742 IPR028976 CheC-like superfamily Clo1313_1742 IPR007597 CheC-like protein Clo1313_1742 IPR012826 Flagellar motor switch FliN Clo1313_1742 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb Clo1313_1742 IPR001543 Surface presentation of antigen (SpoA) Clo1313_1742 IPR036429 SpoA-like superfamily Clo1313_1743 IPR028976 CheC-like superfamily Clo1313_1743 IPR001689 Flagellar motor switch protein FliM Clo1313_1743 IPR001543 Surface presentation of antigen (SpoA) Clo1313_1743 IPR036429 SpoA-like superfamily Clo1313_1745 IPR009384 Swarming motility protein SwrD-like Clo1313_1746 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Clo1313_1746 IPR011491 Flagellar hook protein FlgE Clo1313_1746 IPR037058 Flagellar hook protein FlgE superfamily Clo1313_1746 IPR001444 Flagellar basal body rod protein, N-terminal Clo1313_1746 IPR019776 Flagellar basal body rod protein, conserved site Clo1313_1746 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Clo1313_1746 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like Clo1313_1748 IPR005648 Flagellar hook capping protein Clo1313_1752 IPR040627 T3SS EscN ATPase, C-terminal Clo1313_1752 IPR022425 Flagellar export ATPase FliI, clade 2 Clo1313_1752 IPR000225 Armadillo Clo1313_1752 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site Clo1313_1752 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain Clo1313_1752 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain Clo1313_1752 IPR032463 ATPase, type III secretion system, FliI Clo1313_1752 IPR005714 ATPase, type III secretion system, FliI/YscN Clo1313_1752 IPR003593 AAA+ ATPase domain Clo1313_1752 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_1753 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE Clo1313_1753 IPR022524 Flagellar assembly FliH, Bacilli Clo1313_1754 IPR000090 Flagellar motor switch protein FliG Clo1313_1754 IPR023087 Flagellar motor switch protein FliG, C-terminal Clo1313_1754 IPR011002 Flagellar motor switch protein FliG, alpha-helical Clo1313_1754 IPR032779 Flagellar motor switch protein FliG, middle domain Clo1313_1754 IPR028263 Flagellar motor switch protein FliG, N-terminal domain Clo1313_1756 IPR001624 Flagellar hook-basal body complex protein FliE Clo1313_1757 IPR001444 Flagellar basal body rod protein, N-terminal Clo1313_1757 IPR019776 Flagellar basal body rod protein, conserved site Clo1313_1757 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Clo1313_1757 IPR006299 Flagellar basal-body rod protein FlgC Clo1313_1758 IPR006300 Flagellar basal-body rod protein FlgB Clo1313_1758 IPR001444 Flagellar basal body rod protein, N-terminal Clo1313_1758 IPR019776 Flagellar basal body rod protein, conserved site Clo1313_1759 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO Clo1313_1759 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related Clo1313_1759 IPR036188 FAD/NAD(P)-binding domain superfamily Clo1313_1759 IPR020595 MnmG-related, conserved site Clo1313_1760 IPR023405 DNA topoisomerase, type IA, core domain Clo1313_1760 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 Clo1313_1760 IPR000380 DNA topoisomerase, type IA Clo1313_1760 IPR034149 DNA topoisomerase 1, TOPRIM domain Clo1313_1760 IPR006171 TOPRIM domain Clo1313_1760 IPR028612 DNA topoisomerase I, type IA Clo1313_1760 IPR005733 DNA topoisomerase I, bacterial-type Clo1313_1760 IPR013498 DNA topoisomerase, type IA, zn finger Clo1313_1760 IPR003602 DNA topoisomerase, type IA, DNA-binding domain Clo1313_1760 IPR003601 DNA topoisomerase, type IA, domain 2 Clo1313_1760 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 Clo1313_1760 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 Clo1313_1760 IPR013497 DNA topoisomerase, type IA, central Clo1313_1760 IPR023406 DNA topoisomerase, type IA, active site Clo1313_1761 IPR041614 DprA, winged helix domain Clo1313_1761 IPR003488 DNA recombination-mediator protein A Clo1313_1761 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_1761 IPR010994 RuvA domain 2-like Clo1313_1762 IPR004808 AP endonuclease 1 Clo1313_1762 IPR005135 Endonuclease/exonuclease/phosphatase Clo1313_1762 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Clo1313_1762 IPR020848 AP endonuclease 1, conserved site Clo1313_1762 IPR020847 AP endonuclease 1, binding site Clo1313_1763 IPR005185 Inner membrane component domain Clo1313_1763 IPR031308 Uncharacterised conserved protein UCP028777 Clo1313_1765 IPR020568 Ribosomal protein S5 domain 2-type fold Clo1313_1765 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_1765 IPR000523 Magnesium chelatase ChlI domain Clo1313_1765 IPR025158 Mg chelatase-related protein, C-terminal domain Clo1313_1765 IPR004482 Mg chelatase-related protein Clo1313_1765 IPR001208 MCM domain Clo1313_1765 IPR003593 AAA+ ATPase domain Clo1313_1765 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Clo1313_1768 IPR002102 Cellulosome anchoring protein, cohesin domain Clo1313_1768 IPR002105 Dockerin type I repeat Clo1313_1768 IPR036966 Carbohydrate-binding module 3 superfamily Clo1313_1768 IPR036439 Dockerin domain superfamily Clo1313_1768 IPR016134 Dockerin domain Clo1313_1768 IPR001956 Carbohydrate-binding module 3 Clo1313_1768 IPR018247 EF-Hand 1, calcium-binding site Clo1313_1768 IPR008969 Carboxypeptidase-like, regulatory domain superfamily Clo1313_1768 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clo1313_1770 IPR005144 ATP-cone domain Clo1313_1770 IPR003796 Ribonucleotide reductase regulator NrdR-like Clo1313_1771 IPR027275 PRC-barrel domain Clo1313_1771 IPR011033 PRC-barrel-like superfamily Clo1313_1771 IPR014238 Sporulation protein YlmC/YmxH Clo1313_1772 IPR014284 RNA polymerase sigma-70 like domain Clo1313_1772 IPR014212 RNA polymerase sigma-G type Clo1313_1772 IPR000943 RNA polymerase sigma-70 Clo1313_1772 IPR007627 RNA polymerase sigma-70 region 2 Clo1313_1772 IPR007624 RNA polymerase sigma-70 region 3 Clo1313_1772 IPR007630 RNA polymerase sigma-70 region 4 Clo1313_1772 IPR013325 RNA polymerase sigma factor, region 2 Clo1313_1772 IPR013324 RNA polymerase sigma factor, region 3/4-like Clo1313_1772 IPR014322 RNA polymerase sigma-B/F/G type Clo1313_1773 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_1773 IPR014284 RNA polymerase sigma-70 like domain Clo1313_1773 IPR014200 RNA polymerase sigma-E type Clo1313_1773 IPR000943 RNA polymerase sigma-70 Clo1313_1773 IPR013324 RNA polymerase sigma factor, region 3/4-like Clo1313_1773 IPR007630 RNA polymerase sigma-70 region 4 Clo1313_1773 IPR013325 RNA polymerase sigma factor, region 2 Clo1313_1773 IPR007627 RNA polymerase sigma-70 region 2 Clo1313_1775 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Clo1313_1775 IPR008280 Tubulin/FtsZ, C-terminal Clo1313_1775 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Clo1313_1775 IPR020805 Cell division protein FtsZ, conserved site Clo1313_1775 IPR000158 Cell division protein FtsZ Clo1313_1775 IPR003008 Tubulin/FtsZ, GTPase domain Clo1313_1775 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Clo1313_1775 IPR024757 Cell division protein FtsZ, C-terminal Clo1313_1776 IPR020823 Cell division protein FtsA Clo1313_1776 IPR003494 SHS2 domain inserted in FtsA Clo1313_1777 IPR009709 Protein of unknown function DUF1290 Clo1313_1778 IPR005548 Cell division protein FtsQ/DivIB Clo1313_1778 IPR026579 Cell division protein FtsQ Clo1313_1778 IPR034746 POTRA domain Clo1313_1778 IPR013685 POTRA domain, FtsQ-type Clo1313_1780 IPR036565 Mur-like, catalytic domain superfamily Clo1313_1780 IPR013564 Domain of unknown function DUF1727 Clo1313_1780 IPR013221 Mur ligase, central Clo1313_1781 IPR033949 Cobyric acid synthase, glutamine amidotransferase type 1 Clo1313_1781 IPR017929 CobB/CobQ glutamine amidotransferase Clo1313_1781 IPR011698 CobB/CobQ-like glutamine amidotransferase Clo1313_1781 IPR029062 Class I glutamine amidotransferase-like Clo1313_1782 IPR001207 Transposase, mutator type Clo1313_1783 IPR036439 Dockerin domain superfamily Clo1313_1783 IPR016134 Dockerin domain Clo1313_1783 IPR018247 EF-Hand 1, calcium-binding site Clo1313_1783 IPR015943 WD40/YVTN repeat-like-containing domain superfamily Clo1313_1783 IPR002105 Dockerin type I repeat Clo1313_1788 IPR012341 Six-hairpin glycosidase-like superfamily Clo1313_1788 IPR008928 Six-hairpin glycosidase superfamily Clo1313_1788 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clo1313_1788 IPR001956 Carbohydrate-binding module 3 Clo1313_1788 IPR036966 Carbohydrate-binding module 3 superfamily Clo1313_1788 IPR001701 Glycoside hydrolase family 9 Clo1313_1788 IPR033126 Glycosyl hydrolases family 9, Asp/Glu active sites Clo1313_1788 IPR018221 Glycoside hydrolase family 9, His active site Clo1313_1790 IPR036249 Thioredoxin-like superfamily Clo1313_1791 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain Clo1313_1791 IPR036010 2Fe-2S ferredoxin-like superfamily Clo1313_1791 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding Clo1313_1791 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clo1313_1791 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clo1313_1791 IPR009016 Iron hydrogenase Clo1313_1791 IPR004108 Iron hydrogenase, large subunit, C-terminal Clo1313_1791 IPR003149 Iron hydrogenase, small subunit Clo1313_1791 IPR036991 Iron hydrogenase, small subunit superfamily Clo1313_1791 IPR013352 Iron hydrogenase, subset Clo1313_1792 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Clo1313_1792 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site Clo1313_1792 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Clo1313_1792 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clo1313_1792 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain Clo1313_1792 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Clo1313_1792 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clo1313_1798 IPR034789 Bifunctional aldehyde-alcohol dehydrogenase, C-terminal domain Clo1313_1798 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase Clo1313_1798 IPR015590 Aldehyde dehydrogenase domain Clo1313_1798 IPR016162 Aldehyde dehydrogenase, N-terminal Clo1313_1798 IPR016163 Aldehyde dehydrogenase, C-terminal Clo1313_1798 IPR016161 Aldehyde/histidinol dehydrogenase Clo1313_1798 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA Clo1313_1798 IPR039697 Iron-type alcohol dehydrogenase-like Clo1313_1798 IPR018211 Alcohol dehydrogenase, iron-type, conserved site Clo1313_1799 IPR036390 Winged helix DNA-binding domain superfamily Clo1313_1799 IPR003781 CoA-binding Clo1313_1799 IPR036291 NAD(P)-binding domain superfamily Clo1313_1799 IPR009718 Rex DNA-binding, C-terminal domain Clo1313_1799 IPR022876 Redox-sensing transcriptional repressor Rex Clo1313_1799 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_1800 IPR014214 Dipicolinic acid synthetase, subunit B Clo1313_1800 IPR003382 Flavoprotein Clo1313_1800 IPR036551 Flavin prenyltransferase-like Clo1313_1802 IPR007863 Peptidase M16, C-terminal Clo1313_1802 IPR001431 Peptidase M16, zinc-binding site Clo1313_1802 IPR011765 Peptidase M16, N-terminal Clo1313_1802 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like Clo1313_1803 IPR022967 RNA-binding domain, S1 Clo1313_1803 IPR036345 Exoribonuclease, PH domain 2 superfamily Clo1313_1803 IPR004087 K Homology domain Clo1313_1803 IPR020568 Ribosomal protein S5 domain 2-type fold Clo1313_1803 IPR004088 K Homology domain, type 1 Clo1313_1803 IPR036612 K Homology domain, type 1 superfamily Clo1313_1803 IPR012340 Nucleic acid-binding, OB-fold Clo1313_1803 IPR012162 Polyribonucleotide nucleotidyltransferase Clo1313_1803 IPR027408 PNPase/RNase PH domain superfamily Clo1313_1803 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain Clo1313_1803 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily Clo1313_1803 IPR003029 S1 domain Clo1313_1803 IPR015847 Exoribonuclease, phosphorolytic domain 2 Clo1313_1803 IPR001247 Exoribonuclease, phosphorolytic domain 1 Clo1313_1804 IPR009068 S15/NS1, RNA-binding Clo1313_1804 IPR005290 Ribosomal protein S15, bacterial-type Clo1313_1804 IPR000589 Ribosomal protein S15 Clo1313_1806 IPR024207 Spore coat assembly protein CotJB, domain Clo1313_1806 IPR016571 Spore coat assembly protein CotJB Clo1313_1807 IPR007760 Manganese catalase Clo1313_1807 IPR039377 Manganese catalase, ferritin-like di-iron-binding domain Clo1313_1807 IPR009078 Ferritin-like superfamily Clo1313_1807 IPR012347 Ferritin-like Clo1313_1808 IPR003305 Carbohydrate-binding, CenC-like Clo1313_1808 IPR002105 Dockerin type I repeat Clo1313_1808 IPR016134 Dockerin domain Clo1313_1808 IPR004197 Cellulase, Ig-like domain Clo1313_1808 IPR036439 Dockerin domain superfamily Clo1313_1808 IPR018221 Glycoside hydrolase family 9, His active site Clo1313_1808 IPR001701 Glycoside hydrolase family 9 Clo1313_1808 IPR033126 Glycosyl hydrolases family 9, Asp/Glu active sites Clo1313_1808 IPR013783 Immunoglobulin-like fold Clo1313_1808 IPR014756 Immunoglobulin E-set Clo1313_1808 IPR008979 Galactose-binding-like domain superfamily Clo1313_1808 IPR012341 Six-hairpin glycosidase-like superfamily Clo1313_1808 IPR003305 Carbohydrate-binding, CenC-like Clo1313_1808 IPR014756 Immunoglobulin E-set Clo1313_1808 IPR008928 Six-hairpin glycosidase superfamily Clo1313_1808 IPR012341 Six-hairpin glycosidase-like superfamily Clo1313_1808 IPR004197 Cellulase, Ig-like domain Clo1313_1808 IPR002105 Dockerin type I repeat Clo1313_1808 IPR016134 Dockerin domain Clo1313_1808 IPR008928 Six-hairpin glycosidase superfamily Clo1313_1808 IPR008979 Galactose-binding-like domain superfamily Clo1313_1808 IPR001701 Glycoside hydrolase family 9 Clo1313_1808 IPR033126 Glycosyl hydrolases family 9, Asp/Glu active sites Clo1313_1808 IPR018221 Glycoside hydrolase family 9, His active site Clo1313_1808 IPR013783 Immunoglobulin-like fold Clo1313_1808 IPR036439 Dockerin domain superfamily Clo1313_1809 IPR014756 Immunoglobulin E-set Clo1313_1809 IPR013783 Immunoglobulin-like fold Clo1313_1809 IPR018221 Glycoside hydrolase family 9, His active site Clo1313_1809 IPR033126 Glycosyl hydrolases family 9, Asp/Glu active sites Clo1313_1809 IPR001701 Glycoside hydrolase family 9 Clo1313_1809 IPR008979 Galactose-binding-like domain superfamily Clo1313_1809 IPR036439 Dockerin domain superfamily Clo1313_1809 IPR002105 Dockerin type I repeat Clo1313_1809 IPR016134 Dockerin domain Clo1313_1809 IPR004197 Cellulase, Ig-like domain Clo1313_1809 IPR003305 Carbohydrate-binding, CenC-like Clo1313_1809 IPR012341 Six-hairpin glycosidase-like superfamily Clo1313_1809 IPR008928 Six-hairpin glycosidase superfamily Clo1313_1811 IPR007841 Uncharacterised protein family UPF0210 Clo1313_1812 IPR002912 ACT domain Clo1313_1812 IPR022986 Uncharacterised protein family UPF0237, ACT-type Clo1313_1813 IPR029787 Nucleotide cyclase Clo1313_1813 IPR001633 EAL domain Clo1313_1813 IPR035919 EAL domain superfamily Clo1313_1813 IPR000160 GGDEF domain Clo1313_1813 IPR005330 MHYT domain Clo1313_1816 IPR036966 Carbohydrate-binding module 3 superfamily Clo1313_1816 IPR001000 Glycoside hydrolase family 10 domain Clo1313_1816 IPR031158 Glycosyl hydrolases family 10, active site Clo1313_1816 IPR001547 Glycoside hydrolase, family 5 Clo1313_1816 IPR018087 Glycoside hydrolase, family 5, conserved site Clo1313_1816 IPR017853 Glycoside hydrolase superfamily Clo1313_1816 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clo1313_1816 IPR001956 Carbohydrate-binding module 3 Clo1313_1817 IPR036966 Carbohydrate-binding module 3 superfamily Clo1313_1817 IPR001956 Carbohydrate-binding module 3 Clo1313_1817 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clo1313_1817 IPR024449 Anti-sigma factor RsgI, N-terminal Clo1313_1818 IPR014244 RNA polymerase sigma-I type Clo1313_1818 IPR014284 RNA polymerase sigma-70 like domain Clo1313_1818 IPR013325 RNA polymerase sigma factor, region 2 Clo1313_1818 IPR007627 RNA polymerase sigma-70 region 2 Clo1313_1823 IPR035439 UPF0145 domain superfamily Clo1313_1823 IPR002765 Uncharacterised protein family UPF0145 Clo1313_1824 IPR039421 Type I protein exporter Clo1313_1824 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_1824 IPR003439 ABC transporter-like Clo1313_1824 IPR036640 ABC transporter type 1, transmembrane domain superfamily Clo1313_1824 IPR011527 ABC transporter type 1, transmembrane domain Clo1313_1824 IPR003593 AAA+ ATPase domain Clo1313_1825 IPR011527 ABC transporter type 1, transmembrane domain Clo1313_1825 IPR003593 AAA+ ATPase domain Clo1313_1825 IPR003439 ABC transporter-like Clo1313_1825 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_1825 IPR036640 ABC transporter type 1, transmembrane domain superfamily Clo1313_1825 IPR017871 ABC transporter, conserved site Clo1313_1825 IPR039421 Type I protein exporter Clo1313_1826 IPR023064 D-ribose pyranase Clo1313_1826 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU Clo1313_1826 IPR023750 RbsD-like superfamily Clo1313_1827 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA Clo1313_1827 IPR018211 Alcohol dehydrogenase, iron-type, conserved site Clo1313_1827 IPR039697 Iron-type alcohol dehydrogenase-like Clo1313_1828 IPR030159 Autoinducer 2 ABC transporter, substrate-binding protein LsrB Clo1313_1828 IPR028082 Periplasmic binding protein-like I Clo1313_1828 IPR025997 Periplasmic binding protein Clo1313_1829 IPR001851 ABC transporter, permease Clo1313_1830 IPR003439 ABC transporter-like Clo1313_1830 IPR017871 ABC transporter, conserved site Clo1313_1830 IPR015861 ABC transporter, ribose import, RbsA Clo1313_1830 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_1830 IPR003593 AAA+ ATPase domain Clo1313_1831 IPR022687 DTXR-type HTH domain Clo1313_1831 IPR000600 ROK family Clo1313_1831 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_1831 IPR036390 Winged helix DNA-binding domain superfamily Clo1313_1832 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site Clo1313_1832 IPR029056 Ribokinase-like Clo1313_1832 IPR011611 Carbohydrate kinase PfkB Clo1313_1833 IPR020843 Polyketide synthase, enoylreductase domain Clo1313_1833 IPR036291 NAD(P)-binding domain superfamily Clo1313_1833 IPR011032 GroES-like superfamily Clo1313_1833 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site Clo1313_1833 IPR013154 Alcohol dehydrogenase, N-terminal Clo1313_1833 IPR013149 Alcohol dehydrogenase, C-terminal Clo1313_1838 IPR003439 ABC transporter-like Clo1313_1838 IPR003838 ABC transporter permease protein domain Clo1313_1838 IPR003593 AAA+ ATPase domain Clo1313_1838 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_1838 IPR025857 MacB-like periplasmic core domain Clo1313_1838 IPR017911 ABC transporter, macrolide export, ATP-binding domain Clo1313_1838 IPR017871 ABC transporter, conserved site Clo1313_1846 IPR022310 NAD/GMP synthase Clo1313_1846 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clo1313_1846 IPR004739 GMP synthase, glutamine amidotransferase Clo1313_1846 IPR001674 GMP synthase, C-terminal Clo1313_1846 IPR017926 Glutamine amidotransferase Clo1313_1846 IPR029062 Class I glutamine amidotransferase-like Clo1313_1846 IPR025777 GMP synthetase ATP pyrophosphatase domain Clo1313_1846 IPR022955 GMP synthase Clo1313_1847 IPR036291 NAD(P)-binding domain superfamily Clo1313_1847 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase Clo1313_1847 IPR033524 Leu/Phe/Val dehydrogenases active site Clo1313_1847 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal Clo1313_1847 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain Clo1313_1847 IPR014362 Glutamate dehydrogenase Clo1313_1847 IPR033922 NAD(P) binding domain of glutamate dehydrogenase Clo1313_1848 IPR017938 Riboflavin synthase-like beta-barrel Clo1313_1848 IPR001433 Oxidoreductase FAD/NAD(P)-binding Clo1313_1848 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit Clo1313_1848 IPR017927 FAD-binding domain, ferredoxin reductase-type Clo1313_1848 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Clo1313_1848 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain Clo1313_1849 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Clo1313_1849 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain Clo1313_1849 IPR009051 Alpha-helical ferredoxin Clo1313_1849 IPR023753 FAD/NAD(P)-binding domain Clo1313_1849 IPR036188 FAD/NAD(P)-binding domain superfamily Clo1313_1849 IPR028261 Dihydroprymidine dehydrogenase domain II Clo1313_1850 IPR001207 Transposase, mutator type Clo1313_1852 IPR002822 Nickel insertion protein Clo1313_1853 IPR035893 PurE domain superfamily Clo1313_1853 IPR000031 PurE domain Clo1313_1853 IPR039476 Pyridinium-3,5-biscarboxylic acid mononucleotide synthase Clo1313_1854 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal Clo1313_1854 IPR036291 NAD(P)-binding domain superfamily Clo1313_1854 IPR000304 Pyrroline-5-carboxylate reductase Clo1313_1854 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily Clo1313_1854 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain Clo1313_1857 IPR001387 Cro/C1-type helix-turn-helix domain Clo1313_1857 IPR010982 Lambda repressor-like, DNA-binding domain superfamily Clo1313_1858 IPR004839 Aminotransferase, class I/classII Clo1313_1858 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site Clo1313_1858 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Clo1313_1858 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Clo1313_1858 IPR015424 Pyridoxal phosphate-dependent transferase Clo1313_1859 IPR011008 Dimeric alpha-beta barrel Clo1313_1859 IPR000485 AsnC-type HTH domain Clo1313_1859 IPR019888 Transcription regulator AsnC-type Clo1313_1859 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Clo1313_1859 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_1859 IPR036390 Winged helix DNA-binding domain superfamily Clo1313_1862 IPR005746 Thioredoxin Clo1313_1862 IPR036249 Thioredoxin-like superfamily Clo1313_1862 IPR017937 Thioredoxin, conserved site Clo1313_1862 IPR013766 Thioredoxin domain Clo1313_1864 IPR001207 Transposase, mutator type Clo1313_1867 IPR035090 Phosphorylase pyridoxal-phosphate attachment site Clo1313_1867 IPR024517 Glycogen phosphorylase, domain of unknown function DUF3417 Clo1313_1867 IPR000811 Glycosyl transferase, family 35 Clo1313_1867 IPR011834 Alpha-glucan phosphorylase Clo1313_1869 IPR005287 Conserved hypothetical protein CHP00375 Clo1313_1869 IPR010994 RuvA domain 2-like Clo1313_1869 IPR016195 Polymerase/histidinol phosphatase-like Clo1313_1870 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Clo1313_1870 IPR008275 CoA enzyme activase Clo1313_1873 IPR027304 Trigger factor/SurA domain superfamily Clo1313_1873 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Clo1313_1873 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type Clo1313_1873 IPR023059 Foldase protein PrsA Clo1313_1874 IPR036286 LexA/Signal peptidase-like superfamily Clo1313_1874 IPR019533 Peptidase S26 Clo1313_1874 IPR000223 Peptidase S26A, signal peptidase I Clo1313_1874 IPR019758 Peptidase S26A, signal peptidase I, conserved site Clo1313_1874 IPR019757 Peptidase S26A, signal peptidase I, lysine active site Clo1313_1874 IPR019756 Peptidase S26A, signal peptidase I, serine active site Clo1313_1875 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 Clo1313_1875 IPR013785 Aldolase-type TIM barrel Clo1313_1875 IPR000771 Fructose-bisphosphate aldolase, class-II Clo1313_1876 IPR022953 ATP-dependent 6-phosphofructokinase Clo1313_1876 IPR035966 Phosphofructokinase superfamily Clo1313_1876 IPR011404 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, XF0274 Clo1313_1876 IPR000023 Phosphofructokinase domain Clo1313_1878 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal Clo1313_1878 IPR011304 L-lactate dehydrogenase Clo1313_1878 IPR018177 L-lactate dehydrogenase, active site Clo1313_1878 IPR022383 Lactate/malate dehydrogenase, C-terminal Clo1313_1878 IPR001236 Lactate/malate dehydrogenase, N-terminal Clo1313_1878 IPR001557 L-lactate/malate dehydrogenase Clo1313_1878 IPR036291 NAD(P)-binding domain superfamily Clo1313_1879 IPR037062 Malic enzyme, N-terminal domain superfamily Clo1313_1879 IPR036291 NAD(P)-binding domain superfamily Clo1313_1879 IPR015884 Malic enzyme, conserved site Clo1313_1879 IPR012301 Malic enzyme, N-terminal domain Clo1313_1879 IPR012302 Malic enzyme, NAD-binding Clo1313_1879 IPR001891 Malic oxidoreductase Clo1313_1880 IPR012349 FMN-binding split barrel Clo1313_1880 IPR002563 Flavin reductase like domain Clo1313_1881 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding Clo1313_1881 IPR013352 Iron hydrogenase, subset Clo1313_1881 IPR004108 Iron hydrogenase, large subunit, C-terminal Clo1313_1881 IPR036010 2Fe-2S ferredoxin-like superfamily Clo1313_1881 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain Clo1313_1881 IPR036991 Iron hydrogenase, small subunit superfamily Clo1313_1881 IPR003149 Iron hydrogenase, small subunit Clo1313_1881 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clo1313_1881 IPR009016 Iron hydrogenase Clo1313_1881 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clo1313_1882 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site Clo1313_1882 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain Clo1313_1882 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clo1313_1882 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clo1313_1882 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Clo1313_1882 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Clo1313_1882 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Clo1313_1884 IPR015387 LuxQ, periplasmic Clo1313_1884 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Clo1313_1884 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Clo1313_1884 IPR005467 Histidine kinase domain Clo1313_1884 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clo1313_1884 IPR001789 Signal transduction response regulator, receiver domain Clo1313_1884 IPR003594 Histidine kinase/HSP90-like ATPase Clo1313_1884 IPR011006 CheY-like superfamily Clo1313_1884 IPR029151 Periplasmic sensor-like domain superfamily Clo1313_1884 IPR035965 PAS domain superfamily Clo1313_1884 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Clo1313_1885 IPR036249 Thioredoxin-like superfamily Clo1313_1885 IPR041921 NADH-quinone oxidoreductase subunit E, N-terminal Clo1313_1885 IPR042128 NuoE domain Clo1313_1885 IPR002023 NADH-quinone oxidoreductase subunit E-like Clo1313_1885 IPR028431 NADP-reducing hydrogenase subunit HndA Clo1313_1888 IPR007202 4Fe-4S domain Clo1313_1888 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria Clo1313_1888 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB Clo1313_1888 IPR011005 Dihydropteroate synthase-like Clo1313_1888 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clo1313_1888 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clo1313_1889 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clo1313_1889 IPR003594 Histidine kinase/HSP90-like ATPase Clo1313_1889 IPR010194 Anti-sigma F factor Clo1313_1891 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily Clo1313_1891 IPR036621 Anticodon-binding domain superfamily Clo1313_1891 IPR004154 Anticodon-binding Clo1313_1891 IPR006195 Aminoacyl-tRNA synthetase, class II Clo1313_1891 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) Clo1313_1891 IPR002320 Threonine-tRNA ligase, class IIa Clo1313_1891 IPR012676 TGS-like Clo1313_1891 IPR012675 Beta-grasp domain superfamily Clo1313_1891 IPR004095 TGS Clo1313_1891 IPR033728 Threonine-tRNA ligase catalytic core domain Clo1313_1891 IPR012947 Threonyl/alanyl tRNA synthetase, SAD Clo1313_1896 IPR005225 Small GTP-binding protein domain Clo1313_1896 IPR032090 Peptide chain release factor 3, C-terminal Clo1313_1896 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily Clo1313_1896 IPR041732 Peptide chain release factor 3, GTP-binding domain Clo1313_1896 IPR031157 Tr-type G domain, conserved site Clo1313_1896 IPR000795 Transcription factor, GTP-binding domain Clo1313_1896 IPR009000 Translation protein, beta-barrel domain superfamily Clo1313_1896 IPR004161 Translation elongation factor EFTu-like, domain 2 Clo1313_1896 IPR035647 EF-G domain III/V-like Clo1313_1896 IPR004548 Peptide chain release factor 3 Clo1313_1896 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_1897 IPR001119 S-layer homology domain Clo1313_1897 IPR002102 Cellulosome anchoring protein, cohesin domain Clo1313_1897 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clo1313_1898 IPR036515 Transposase IS200-like superfamily Clo1313_1898 IPR002686 Transposase IS200-like Clo1313_1901 IPR041856 Glutamine-dependent NAD+ synthetase, C-terminal Clo1313_1901 IPR003010 Carbon-nitrogen hydrolase Clo1313_1901 IPR036526 Carbon-nitrogen hydrolase superfamily Clo1313_1901 IPR003694 NAD(+) synthetase Clo1313_1901 IPR022310 NAD/GMP synthase Clo1313_1901 IPR014445 Glutamine-dependent NAD(+) synthetase Clo1313_1901 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clo1313_1902 IPR033705 Valyl tRNA synthetase, anticodon-binding domain Clo1313_1902 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site Clo1313_1902 IPR002300 Aminoacyl-tRNA synthetase, class Ia Clo1313_1902 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding Clo1313_1902 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clo1313_1902 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm Clo1313_1902 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding Clo1313_1902 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily Clo1313_1902 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm Clo1313_1902 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain Clo1313_1902 IPR002303 Valine-tRNA ligase Clo1313_1904 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily Clo1313_1904 IPR019800 Glycoside hydrolase, family 3, active site Clo1313_1904 IPR002772 Glycoside hydrolase family 3 C-terminal domain Clo1313_1904 IPR001764 Glycoside hydrolase, family 3, N-terminal Clo1313_1904 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily Clo1313_1904 IPR017853 Glycoside hydrolase superfamily Clo1313_1907 IPR001303 Class II aldolase/adducin N-terminal Clo1313_1907 IPR036409 Class II aldolase/adducin N-terminal domain superfamily Clo1313_1908 IPR041280 Bacterial Ig domain, transpeptidase-associated Clo1313_1908 IPR005490 L,D-transpeptidase catalytic domain Clo1313_1908 IPR038063 L,D-transpeptidase catalytic domain-like Clo1313_1910 IPR011658 PA14 domain Clo1313_1910 IPR037524 PA14/GLEYA domain Clo1313_1910 IPR024449 Anti-sigma factor RsgI, N-terminal Clo1313_1911 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_1911 IPR013325 RNA polymerase sigma factor, region 2 Clo1313_1911 IPR007627 RNA polymerase sigma-70 region 2 Clo1313_1911 IPR014244 RNA polymerase sigma-I type Clo1313_1914 IPR001943 UVR domain Clo1313_1914 IPR003593 AAA+ ATPase domain Clo1313_1914 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_1914 IPR041546 ClpA/ClpB, AAA lid domain Clo1313_1914 IPR028299 ClpA/B, conserved site 2 Clo1313_1914 IPR018368 ClpA/B, conserved site 1 Clo1313_1914 IPR001270 ClpA/B family Clo1313_1914 IPR004176 Clp, N-terminal Clo1313_1914 IPR036628 Clp, N-terminal domain superfamily Clo1313_1914 IPR019489 Clp ATPase, C-terminal Clo1313_1914 IPR003959 ATPase, AAA-type, core Clo1313_1916 IPR003593 AAA+ ATPase domain Clo1313_1916 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_1916 IPR004602 UvrABC system subunit A Clo1313_1916 IPR041552 UvrA DNA-binding domain Clo1313_1916 IPR041102 UvrA, interaction domain Clo1313_1916 IPR017871 ABC transporter, conserved site Clo1313_1916 IPR003439 ABC transporter-like Clo1313_1917 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 Clo1313_1917 IPR010611 3D domain Clo1313_1917 IPR011098 G5 domain Clo1313_1917 IPR036908 RlpA-like domain superfamily Clo1313_1918 IPR006935 Helicase/UvrB, N-terminal Clo1313_1918 IPR014001 Helicase superfamily 1/2, ATP-binding domain Clo1313_1918 IPR024759 UvrB, YAD/RRR-motif-containing domain Clo1313_1918 IPR001650 Helicase, C-terminal Clo1313_1918 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_1918 IPR001943 UVR domain Clo1313_1918 IPR036876 UVR domain superfamily Clo1313_1918 IPR004807 UvrABC system, subunit B Clo1313_1918 IPR041471 UvrB, interaction domain Clo1313_1921 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily Clo1313_1921 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta Clo1313_1921 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat Clo1313_1921 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal Clo1313_1921 IPR013760 DNA topoisomerase, type IIA-like domain superfamily Clo1313_1921 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal Clo1313_1921 IPR005743 DNA gyrase, subunit A Clo1313_1922 IPR006171 TOPRIM domain Clo1313_1922 IPR034160 DNA gyrase subunit B, TOPRIM domain Clo1313_1922 IPR018522 DNA topoisomerase, type IIA, conserved site Clo1313_1922 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Clo1313_1922 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal Clo1313_1922 IPR013760 DNA topoisomerase, type IIA-like domain superfamily Clo1313_1922 IPR001241 DNA topoisomerase, type IIA Clo1313_1922 IPR020568 Ribosomal protein S5 domain 2-type fold Clo1313_1922 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clo1313_1922 IPR003594 Histidine kinase/HSP90-like ATPase Clo1313_1922 IPR011557 DNA gyrase, subunit B Clo1313_1922 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 Clo1313_1922 IPR002288 DNA gyrase B subunit, C-terminal Clo1313_1925 IPR020914 Uncharacterised protein family UPF0442 Clo1313_1925 IPR024528 Threonine/Serine exporter, ThrE Clo1313_1926 IPR010619 Putative threonine/serine exporter Clo1313_1927 IPR014258 CAP domain, YkwD-like Clo1313_1927 IPR014044 CAP domain Clo1313_1927 IPR035940 CAP superfamily Clo1313_1928 IPR002528 Multi antimicrobial extrusion protein Clo1313_1929 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily Clo1313_1929 IPR003660 HAMP domain Clo1313_1929 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Clo1313_1929 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding Clo1313_1929 IPR004090 Chemotaxis methyl-accepting receptor Clo1313_1929 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site Clo1313_1931 IPR022278 Phosphoserine aminotransferase Clo1313_1931 IPR006272 Phosphoserine aminotransferase, Mycobacterial-type Clo1313_1931 IPR015424 Pyridoxal phosphate-dependent transferase Clo1313_1931 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Clo1313_1931 IPR000192 Aminotransferase class V domain Clo1313_1931 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Clo1313_1937 IPR024705 Spermatogenesis-associated protein 20 Clo1313_1937 IPR036249 Thioredoxin-like superfamily Clo1313_1937 IPR004879 Domain of unknown function DUF255 Clo1313_1937 IPR008928 Six-hairpin glycosidase superfamily Clo1313_1937 IPR012341 Six-hairpin glycosidase-like superfamily Clo1313_1938 IPR036291 NAD(P)-binding domain superfamily Clo1313_1938 IPR019811 Homoserine dehydrogenase, conserved site Clo1313_1938 IPR001342 Homoserine dehydrogenase, catalytic Clo1313_1938 IPR016204 Homoserine dehydrogenase Clo1313_1938 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding Clo1313_1938 IPR002912 ACT domain Clo1313_1939 IPR006555 ATP-dependent helicase, C-terminal Clo1313_1939 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type Clo1313_1939 IPR006935 Helicase/UvrB, N-terminal Clo1313_1939 IPR014001 Helicase superfamily 1/2, ATP-binding domain Clo1313_1939 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_1940 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal Clo1313_1940 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clo1313_1940 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal Clo1313_1940 IPR000780 MCP methyltransferase, CheR-type Clo1313_1942 IPR000700 PAS-associated, C-terminal Clo1313_1942 IPR003594 Histidine kinase/HSP90-like ATPase Clo1313_1942 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clo1313_1942 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Clo1313_1942 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Clo1313_1942 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Clo1313_1942 IPR005467 Histidine kinase domain Clo1313_1944 IPR024084 Isopropylmalate dehydrogenase-like domain Clo1313_1944 IPR004790 Isocitrate dehydrogenase NADP-dependent Clo1313_1944 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site Clo1313_1946 IPR036812 NADP-dependent oxidoreductase domain superfamily Clo1313_1946 IPR023210 NADP-dependent oxidoreductase domain Clo1313_1947 IPR001296 Glycosyl transferase, family 1 Clo1313_1947 IPR011835 Bacterial/plant glycogen synthase Clo1313_1947 IPR013534 Starch synthase, catalytic domain Clo1313_1950 IPR020103 Pseudouridine synthase, catalytic domain superfamily Clo1313_1950 IPR006225 Pseudouridine synthase, RluC/RluD Clo1313_1950 IPR006145 Pseudouridine synthase, RsuA/RluA Clo1313_1950 IPR002942 RNA-binding S4 domain Clo1313_1950 IPR036986 RNA-binding S4 domain superfamily Clo1313_1950 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site Clo1313_1951 IPR002052 DNA methylase, N-6 adenine-specific, conserved site Clo1313_1951 IPR000241 Putative RNA methylase domain Clo1313_1951 IPR019614 S-adenosylmethionine-dependent methyltransferase Clo1313_1951 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clo1313_1951 IPR004114 THUMP domain Clo1313_1951 IPR017244 Ribosomal RNA large subunit methyltransferase K/L Clo1313_1953 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Clo1313_1953 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Clo1313_1953 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain Clo1313_1953 IPR036291 NAD(P)-binding domain superfamily Clo1313_1954 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily Clo1313_1954 IPR008928 Six-hairpin glycosidase superfamily Clo1313_1954 IPR012341 Six-hairpin glycosidase-like superfamily Clo1313_1954 IPR011013 Galactose mutarotase-like domain superfamily Clo1313_1954 IPR009342 Putative carbohydrate binding domain Clo1313_1954 IPR037825 Cellobiose phosphorylase, N-terminal Clo1313_1954 IPR010383 Glycosyl hydrolase 94 Clo1313_1954 IPR033432 Glycosyl hydrolase 36, catalytic domain Clo1313_1955 IPR001701 Glycoside hydrolase family 9 Clo1313_1955 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clo1313_1955 IPR018221 Glycoside hydrolase family 9, His active site Clo1313_1955 IPR033126 Glycosyl hydrolases family 9, Asp/Glu active sites Clo1313_1955 IPR001956 Carbohydrate-binding module 3 Clo1313_1955 IPR012341 Six-hairpin glycosidase-like superfamily Clo1313_1955 IPR008928 Six-hairpin glycosidase superfamily Clo1313_1955 IPR036966 Carbohydrate-binding module 3 superfamily Clo1313_1956 IPR037522 HD-GYP domain Clo1313_1956 IPR029787 Nucleotide cyclase Clo1313_1956 IPR006674 HD domain Clo1313_1956 IPR003607 HD/PDEase domain Clo1313_1956 IPR000160 GGDEF domain Clo1313_1957 IPR012338 Beta-lactamase/transpeptidase-like Clo1313_1957 IPR015956 Penicillin-binding protein, C-terminal domain superfamily Clo1313_1957 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A Clo1313_1957 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal Clo1313_1957 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily Clo1313_1957 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal Clo1313_1958 IPR008928 Six-hairpin glycosidase superfamily Clo1313_1958 IPR012341 Six-hairpin glycosidase-like superfamily Clo1313_1958 IPR018221 Glycoside hydrolase family 9, His active site Clo1313_1958 IPR033126 Glycosyl hydrolases family 9, Asp/Glu active sites Clo1313_1958 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clo1313_1958 IPR001701 Glycoside hydrolase family 9 Clo1313_1958 IPR036966 Carbohydrate-binding module 3 superfamily Clo1313_1958 IPR001956 Carbohydrate-binding module 3 Clo1313_1959 IPR011583 Chitinase II Clo1313_1959 IPR017853 Glycoside hydrolase superfamily Clo1313_1959 IPR003610 Carbohydrate-binding module family 5/12 Clo1313_1959 IPR036573 Carbohydrate-binding module superfamily 5/12 Clo1313_1959 IPR001579 Glycoside hydrolase, chitinase active site Clo1313_1959 IPR029070 Chitinase insertion domain superfamily Clo1313_1959 IPR013783 Immunoglobulin-like fold Clo1313_1959 IPR036116 Fibronectin type III superfamily Clo1313_1959 IPR003961 Fibronectin type III Clo1313_1959 IPR001223 Glycoside hydrolase family 18, catalytic domain Clo1313_1960 IPR016134 Dockerin domain Clo1313_1960 IPR002105 Dockerin type I repeat Clo1313_1960 IPR012341 Six-hairpin glycosidase-like superfamily Clo1313_1960 IPR019834 Glycoside hydrolase, family 8, conserved site Clo1313_1960 IPR002037 Glycoside hydrolase, family 8 Clo1313_1960 IPR018247 EF-Hand 1, calcium-binding site Clo1313_1960 IPR008928 Six-hairpin glycosidase superfamily Clo1313_1960 IPR036439 Dockerin domain superfamily Clo1313_1961 IPR013325 RNA polymerase sigma factor, region 2 Clo1313_1961 IPR014244 RNA polymerase sigma-I type Clo1313_1962 IPR024449 Anti-sigma factor RsgI, N-terminal Clo1313_1962 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clo1313_1962 IPR001956 Carbohydrate-binding module 3 Clo1313_1962 IPR036966 Carbohydrate-binding module 3 superfamily Clo1313_1963 IPR033480 Single Cache domain 2 Clo1313_1963 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Clo1313_1963 IPR003660 HAMP domain Clo1313_1963 IPR004090 Chemotaxis methyl-accepting receptor Clo1313_1964 IPR015424 Pyridoxal phosphate-dependent transferase Clo1313_1964 IPR000192 Aminotransferase class V domain Clo1313_1964 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site Clo1313_1964 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Clo1313_1964 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Clo1313_1964 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase Clo1313_1967 IPR015590 Aldehyde dehydrogenase domain Clo1313_1967 IPR016162 Aldehyde dehydrogenase, N-terminal Clo1313_1967 IPR016163 Aldehyde dehydrogenase, C-terminal Clo1313_1967 IPR016161 Aldehyde/histidinol dehydrogenase Clo1313_1967 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site Clo1313_1967 IPR000965 GPR domain Clo1313_1967 IPR012134 Glutamate-5-semialdehyde dehydrogenase Clo1313_1969 IPR001940 Peptidase S1C Clo1313_1969 IPR009003 Peptidase S1, PA clan Clo1313_1969 IPR024449 Anti-sigma factor RsgI, N-terminal Clo1313_1971 IPR018247 EF-Hand 1, calcium-binding site Clo1313_1971 IPR016134 Dockerin domain Clo1313_1971 IPR002105 Dockerin type I repeat Clo1313_1971 IPR036439 Dockerin domain superfamily Clo1313_1971 IPR015943 WD40/YVTN repeat-like-containing domain superfamily Clo1313_1972 IPR001482 Type II/IV secretion system protein Clo1313_1972 IPR006321 Pilus retraction protein PilT Clo1313_1972 IPR003593 AAA+ ATPase domain Clo1313_1972 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_1973 IPR010982 Lambda repressor-like, DNA-binding domain superfamily Clo1313_1973 IPR028082 Periplasmic binding protein-like I Clo1313_1973 IPR000843 LacI-type HTH domain Clo1313_1976 IPR011703 ATPase, AAA-3 Clo1313_1976 IPR041628 ChlI/MoxR, AAA lid domain Clo1313_1976 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_1979 IPR036025 tRNA-splicing ligase RtcB-like superfamily Clo1313_1979 IPR001233 tRNA-splicing ligase, RtcB Clo1313_1980 IPR005077 Peptidase C11, clostripain Clo1313_1980 IPR014173 Peptidase C11, Clostripain Clostridium species Clo1313_1982 IPR036187 DNA mismatch repair protein MutS, core domain superfamily Clo1313_1982 IPR007695 DNA mismatch repair protein MutS-like, N-terminal Clo1313_1982 IPR017261 DNA mismatch repair protein MutS/MSH Clo1313_1982 IPR000432 DNA mismatch repair protein MutS, C-terminal Clo1313_1982 IPR007861 DNA mismatch repair protein MutS, clamp Clo1313_1982 IPR007696 DNA mismatch repair protein MutS, core Clo1313_1982 IPR016151 DNA mismatch repair protein MutS, N-terminal Clo1313_1982 IPR007860 DNA mismatch repair protein MutS, connector domain Clo1313_1982 IPR005748 DNA mismatch repair protein MutS Clo1313_1982 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_1982 IPR036678 MutS, connector domain superfamily Clo1313_1983 IPR013783 Immunoglobulin-like fold Clo1313_1983 IPR041624 Rhamnogalacturonan I lyase beta-sheet domain Clo1313_1983 IPR034641 Polysaccharide lyase family 11 Clo1313_1984 IPR011991 ArsR-like helix-turn-helix domain Clo1313_1984 IPR018334 ArsR-type transcription regulator, HTH motif Clo1313_1984 IPR001845 HTH ArsR-type DNA-binding domain Clo1313_1984 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_1984 IPR036390 Winged helix DNA-binding domain superfamily Clo1313_1985 IPR027256 P-type ATPase, subfamily IB Clo1313_1985 IPR001757 P-type ATPase Clo1313_1985 IPR036163 Heavy metal-associated domain superfamily Clo1313_1985 IPR023299 P-type ATPase, cytoplasmic domain N Clo1313_1985 IPR018303 P-type ATPase, phosphorylation site Clo1313_1985 IPR023298 P-type ATPase, transmembrane domain superfamily Clo1313_1985 IPR008250 P-type ATPase, A domain superfamily Clo1313_1985 IPR036412 HAD-like superfamily Clo1313_1985 IPR023214 HAD superfamily Clo1313_1985 IPR017969 Heavy-metal-associated, conserved site Clo1313_1985 IPR006121 Heavy metal-associated domain, HMA Clo1313_1986 IPR002477 Peptidoglycan binding-like Clo1313_1986 IPR011105 Cell wall hydrolase, SleB Clo1313_1986 IPR014224 Spore cortex-lytic enzyme SleB Clo1313_1986 IPR036365 PGBD-like superfamily Clo1313_1986 IPR042047 Cell wall hydrolase SleB, domain 1 Clo1313_1986 IPR036366 PGBD superfamily Clo1313_1990 IPR018247 EF-Hand 1, calcium-binding site Clo1313_1990 IPR036439 Dockerin domain superfamily Clo1313_1990 IPR016134 Dockerin domain Clo1313_1990 IPR002105 Dockerin type I repeat Clo1313_1990 IPR012341 Six-hairpin glycosidase-like superfamily Clo1313_1990 IPR008928 Six-hairpin glycosidase superfamily Clo1313_1990 IPR019834 Glycoside hydrolase, family 8, conserved site Clo1313_1990 IPR002037 Glycoside hydrolase, family 8 Clo1313_1992 IPR036812 NADP-dependent oxidoreductase domain superfamily Clo1313_1992 IPR023210 NADP-dependent oxidoreductase domain Clo1313_1992 IPR018170 Aldo/keto reductase, conserved site Clo1313_1992 IPR020471 Aldo/keto reductase Clo1313_1993 IPR011767 Glutaredoxin active site Clo1313_1993 IPR011911 Glutaredoxin-like protein, YruB Clo1313_1993 IPR002109 Glutaredoxin Clo1313_1993 IPR036249 Thioredoxin-like superfamily Clo1313_1994 IPR025110 AMP-binding enzyme, C-terminal domain Clo1313_1994 IPR020845 AMP-binding, conserved site Clo1313_1994 IPR000873 AMP-dependent synthetase/ligase Clo1313_1995 IPR000182 GNAT domain Clo1313_1995 IPR016181 Acyl-CoA N-acyltransferase Clo1313_1997 IPR013483 Molybdenum cofactor biosynthesis protein A Clo1313_1997 IPR006638 Elp3/MiaB/NifB Clo1313_1997 IPR007197 Radical SAM Clo1313_1997 IPR013785 Aldolase-type TIM barrel Clo1313_1997 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site Clo1313_1997 IPR010505 Molybdenum cofactor synthesis C-terminal Clo1313_1999 IPR001509 NAD-dependent epimerase/dehydratase Clo1313_1999 IPR036291 NAD(P)-binding domain superfamily Clo1313_2004 IPR000212 DNA helicase, UvrD/REP type Clo1313_2004 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_2004 IPR014016 UvrD-like helicase, ATP-binding domain Clo1313_2004 IPR013986 DExx box DNA helicase domain superfamily Clo1313_2004 IPR014017 UvrD-like DNA helicase, C-terminal Clo1313_2004 IPR034739 UvrD/AddA helicase, N-terminal Clo1313_2005 IPR001238 DNA-binding, RecF Clo1313_2005 IPR018078 DNA-binding, RecF, conserved site Clo1313_2005 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_2005 IPR003395 RecF/RecN/SMC, N-terminal Clo1313_2005 IPR042174 DNA-binding RecF, domain 2 Clo1313_2006 IPR036705 ADP-ribosylation/Crystallin J1 superfamily Clo1313_2006 IPR013479 ADP-ribosyl-dinitrogen reductase hydrolase Clo1313_2006 IPR005502 ADP-ribosylation/Crystallin J1 Clo1313_2008 IPR001207 Transposase, mutator type Clo1313_2014 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type Clo1313_2014 IPR029052 Metallo-dependent phosphatase-like Clo1313_2015 IPR035482 Phosphoglucose isomerase, SIS domain 2 Clo1313_2015 IPR001672 Phosphoglucose isomerase (PGI) Clo1313_2015 IPR018189 Phosphoglucose isomerase, conserved site Clo1313_2015 IPR035476 Phosphoglucose isomerase, SIS domain 1 Clo1313_2017 IPR002547 tRNA-binding domain Clo1313_2017 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain Clo1313_2017 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 Clo1313_2017 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit Clo1313_2017 IPR012340 Nucleic acid-binding, OB-fold Clo1313_2017 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily Clo1313_2017 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain Clo1313_2017 IPR009061 Putative DNA-binding domain superfamily Clo1313_2017 IPR005146 B3/B4 tRNA-binding domain Clo1313_2017 IPR005121 Ferrodoxin-fold anticodon-binding domain Clo1313_2017 IPR005147 tRNA synthetase, B5-domain Clo1313_2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial Clo1313_2018 IPR006195 Aminoacyl-tRNA synthetase, class II Clo1313_2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal Clo1313_2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit Clo1313_2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm Clo1313_2018 IPR002319 Phenylalanyl-tRNA synthetase Clo1313_2020 IPR017853 Glycoside hydrolase superfamily Clo1313_2020 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site Clo1313_2020 IPR017736 Glycoside hydrolase, family 1, beta-glucosidase Clo1313_2020 IPR001360 Glycoside hydrolase family 1 Clo1313_2020 IPR018120 Glycoside hydrolase family 1, active site Clo1313_2022 IPR036439 Dockerin domain superfamily Clo1313_2022 IPR018247 EF-Hand 1, calcium-binding site Clo1313_2022 IPR000757 Glycoside hydrolase family 16 Clo1313_2022 IPR008263 Glycoside hydrolase, family 16, active site Clo1313_2022 IPR016134 Dockerin domain Clo1313_2022 IPR002105 Dockerin type I repeat Clo1313_2022 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Clo1313_2022 IPR008264 Beta-glucanase Clo1313_2023 IPR000843 LacI-type HTH domain Clo1313_2023 IPR028082 Periplasmic binding protein-like I Clo1313_2023 IPR010982 Lambda repressor-like, DNA-binding domain superfamily Clo1313_2024 IPR001173 Glycosyltransferase 2-like Clo1313_2024 IPR029044 Nucleotide-diphospho-sugar transferases Clo1313_2027 IPR034739 UvrD/AddA helicase, N-terminal Clo1313_2027 IPR013986 DExx box DNA helicase domain superfamily Clo1313_2027 IPR014017 UvrD-like DNA helicase, C-terminal Clo1313_2027 IPR000212 DNA helicase, UvrD/REP type Clo1313_2027 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_2027 IPR014016 UvrD-like helicase, ATP-binding domain Clo1313_2031 IPR027302 Glutamine synthetase, N-terminal conserved site Clo1313_2031 IPR004809 Glutamine synthetase type I Clo1313_2031 IPR008146 Glutamine synthetase, catalytic domain Clo1313_2031 IPR027303 Glutamine synthetase, glycine-rich site Clo1313_2031 IPR036651 Glutamine synthetase, N-terminal domain superfamily Clo1313_2031 IPR008147 Glutamine synthetase, beta-Grasp domain Clo1313_2031 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain Clo1313_2033 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal Clo1313_2033 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily Clo1313_2033 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site Clo1313_2033 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain Clo1313_2033 IPR017121 Nitrite reductase [NAD(P)H], large subunit Clo1313_2033 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain Clo1313_2033 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB Clo1313_2033 IPR023753 FAD/NAD(P)-binding domain Clo1313_2033 IPR036188 FAD/NAD(P)-binding domain superfamily Clo1313_2033 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily Clo1313_2033 IPR007419 BFD-like [2Fe-2S]-binding domain Clo1313_2033 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily Clo1313_2034 IPR009051 Alpha-helical ferredoxin Clo1313_2034 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 Clo1313_2034 IPR023753 FAD/NAD(P)-binding domain Clo1313_2034 IPR036188 FAD/NAD(P)-binding domain superfamily Clo1313_2034 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clo1313_2034 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clo1313_2034 IPR028261 Dihydroprymidine dehydrogenase domain II Clo1313_2035 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clo1313_2035 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clo1313_2035 IPR013785 Aldolase-type TIM barrel Clo1313_2035 IPR024188 Glutamate synthase large subunit-like protein Clo1313_2035 IPR002932 Glutamate synthase domain Clo1313_2036 IPR012375 Glutamate synthase large subunit domain 1 stand-alone protein Clo1313_2036 IPR017932 Glutamine amidotransferase type 2 domain Clo1313_2036 IPR029055 Nucleophile aminohydrolases, N-terminal Clo1313_2038 IPR022147 Glutamine synthetase type III N-terminal Clo1313_2038 IPR027303 Glutamine synthetase, glycine-rich site Clo1313_2038 IPR008146 Glutamine synthetase, catalytic domain Clo1313_2038 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain Clo1313_2038 IPR040577 Glutamine synthetase, C-terminal Clo1313_2041 IPR038770 Sodium/solute symporter superfamily Clo1313_2041 IPR004771 K+/H+ exchanger Clo1313_2041 IPR006153 Cation/H+ exchanger Clo1313_2042 IPR036439 Dockerin domain superfamily Clo1313_2042 IPR008264 Beta-glucanase Clo1313_2042 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Clo1313_2042 IPR002105 Dockerin type I repeat Clo1313_2042 IPR016134 Dockerin domain Clo1313_2042 IPR018247 EF-Hand 1, calcium-binding site Clo1313_2042 IPR000757 Glycoside hydrolase family 16 Clo1313_2042 IPR008263 Glycoside hydrolase, family 16, active site Clo1313_2043 IPR002037 Glycoside hydrolase, family 8 Clo1313_2043 IPR019834 Glycoside hydrolase, family 8, conserved site Clo1313_2043 IPR008928 Six-hairpin glycosidase superfamily Clo1313_2043 IPR036439 Dockerin domain superfamily Clo1313_2043 IPR016134 Dockerin domain Clo1313_2043 IPR002105 Dockerin type I repeat Clo1313_2043 IPR018247 EF-Hand 1, calcium-binding site Clo1313_2043 IPR012341 Six-hairpin glycosidase-like superfamily Clo1313_2044 IPR002637 Ham1-like protein Clo1313_2044 IPR020922 dITP/XTP pyrophosphatase Clo1313_2044 IPR029001 Inosine triphosphate pyrophosphatase-like Clo1313_2045 IPR020568 Ribosomal protein S5 domain 2-type fold Clo1313_2045 IPR001247 Exoribonuclease, phosphorolytic domain 1 Clo1313_2045 IPR015847 Exoribonuclease, phosphorolytic domain 2 Clo1313_2045 IPR036345 Exoribonuclease, PH domain 2 superfamily Clo1313_2045 IPR027408 PNPase/RNase PH domain superfamily Clo1313_2045 IPR018336 Ribonuclease PH, conserved site Clo1313_2045 IPR002381 Ribonuclease PH, bacterial-type Clo1313_2046 IPR019606 GerMN domain Clo1313_2047 IPR036291 NAD(P)-binding domain superfamily Clo1313_2047 IPR016040 NAD(P)-binding domain Clo1313_2047 IPR005886 UDP-glucose 4-epimerase Clo1313_2048 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain Clo1313_2050 IPR003828 Epoxyqueuosine reductase QueH Clo1313_2051 IPR008824 RuvB-like P-loop domain Clo1313_2051 IPR008823 RuvB C-terminal winged helix domain Clo1313_2051 IPR036390 Winged helix DNA-binding domain superfamily Clo1313_2051 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_2051 IPR004605 DNA helicase, Holliday junction RuvB-type Clo1313_2051 IPR041445 RuvB, AAA lid domain Clo1313_2051 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_2051 IPR003593 AAA+ ATPase domain Clo1313_2052 IPR036267 RuvA, C-terminal domain superfamily Clo1313_2052 IPR012340 Nucleic acid-binding, OB-fold Clo1313_2052 IPR010994 RuvA domain 2-like Clo1313_2052 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial Clo1313_2052 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 Clo1313_2052 IPR011114 Holliday junction DNA helicase RuvA, C-terminal Clo1313_2052 IPR000085 Bacterial DNA recombination protein RuvA Clo1313_2053 IPR036397 Ribonuclease H superfamily Clo1313_2053 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site Clo1313_2053 IPR002176 Crossover junction endodeoxyribonuclease RuvC Clo1313_2053 IPR012337 Ribonuclease H-like superfamily Clo1313_2054 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clo1313_2054 IPR001518 Argininosuccinate synthase Clo1313_2054 IPR018223 Argininosuccinate synthase, conserved site Clo1313_2054 IPR023434 Argininosuccinate synthase, type 1 subfamily Clo1313_2054 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body Clo1313_2055 IPR008948 L-Aspartase-like Clo1313_2055 IPR022761 Fumarate lyase, N-terminal Clo1313_2055 IPR000362 Fumarate lyase family Clo1313_2055 IPR029419 Argininosuccinate lyase, C-terminal Clo1313_2055 IPR009049 Argininosuccinate lyase Clo1313_2055 IPR024083 Fumarase/histidase, N-terminal Clo1313_2055 IPR020557 Fumarate lyase, conserved site Clo1313_2059 IPR012160 Lipoteichoic acid synthase-like Clo1313_2059 IPR017850 Alkaline-phosphatase-like, core domain superfamily Clo1313_2059 IPR000917 Sulfatase, N-terminal Clo1313_2060 IPR014102 Phytoene desaturase Clo1313_2060 IPR036188 FAD/NAD(P)-binding domain superfamily Clo1313_2060 IPR002937 Amine oxidase Clo1313_2066 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase Clo1313_2066 IPR011006 CheY-like superfamily Clo1313_2066 IPR035909 Methylesterase CheB, C-terminal Clo1313_2066 IPR001789 Signal transduction response regulator, receiver domain Clo1313_2066 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type Clo1313_2067 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clo1313_2067 IPR004453 Epoxyqueuosine reductase QueG Clo1313_2067 IPR009051 Alpha-helical ferredoxin Clo1313_2067 IPR013542 Domain of unknown function DUF1730 Clo1313_2067 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clo1313_2069 IPR017924 RNA-binding protein YhbY Clo1313_2069 IPR001890 RNA-binding, CRM domain Clo1313_2069 IPR035920 YhbY-like superfamily Clo1313_2071 IPR031167 OBG-type guanine nucleotide-binding (G) domain Clo1313_2071 IPR006073 GTP binding domain Clo1313_2071 IPR035101 GTP-binding protein, Obg-type Clo1313_2071 IPR014100 GTP-binding protein Obg/CgtA Clo1313_2071 IPR036726 GTP1/OBG domain superfamily Clo1313_2071 IPR006169 GTP1/OBG domain Clo1313_2071 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily Clo1313_2071 IPR015349 GTP-binding protein OBG, C-terminal Clo1313_2071 IPR006074 GTP1/OBG, conserved site Clo1313_2071 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_2072 IPR018261 Ribosomal protein L27, conserved site Clo1313_2072 IPR001684 Ribosomal protein L27 Clo1313_2074 IPR018258 Ribosomal protein L21, conserved site Clo1313_2074 IPR001787 Ribosomal protein L21 Clo1313_2074 IPR028909 Ribosomal protein L21-like Clo1313_2074 IPR036164 L21-like superfamily Clo1313_2075 IPR012340 Nucleic acid-binding, OB-fold Clo1313_2075 IPR022967 RNA-binding domain, S1 Clo1313_2075 IPR003029 S1 domain Clo1313_2075 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G Clo1313_2075 IPR004659 Ribonuclease E/G Clo1313_2078 IPR021416 Protein of unknown function DUF3048, N-terminal Clo1313_2078 IPR035328 Protein of unknown function DUF3048, C-terminal domain Clo1313_2078 IPR023158 YerB-like superfamily Clo1313_2079 IPR009711 Uncharacterised protein family UPF0473 Clo1313_2080 IPR005227 Putative pre-16S rRNA nuclease Clo1313_2080 IPR006641 YqgF/RNase H-like domain Clo1313_2080 IPR037027 YqgF/RNase H-like domain superfamily Clo1313_2080 IPR012337 Ribonuclease H-like superfamily Clo1313_2081 IPR020471 Aldo/keto reductase Clo1313_2081 IPR023210 NADP-dependent oxidoreductase domain Clo1313_2081 IPR036812 NADP-dependent oxidoreductase domain superfamily Clo1313_2082 IPR009309 IreB regulatory phosphoprotein Clo1313_2083 IPR006638 Elp3/MiaB/NifB Clo1313_2083 IPR005839 Methylthiotransferase Clo1313_2083 IPR002792 TRAM domain Clo1313_2083 IPR038135 Methylthiotransferase, N-terminal domain superfamily Clo1313_2083 IPR034557 Threonylcarbamoyladenosine tRNA methylthiotransferase Clo1313_2083 IPR023404 Radical SAM, alpha/beta horseshoe Clo1313_2083 IPR007197 Radical SAM Clo1313_2083 IPR006467 MiaB-like tRNA modifying enzyme Clo1313_2083 IPR020612 Methylthiotransferase, conserved site Clo1313_2083 IPR013848 Methylthiotransferase, N-terminal Clo1313_2085 IPR007553 Domain of unknown function DUF523 Clo1313_2086 IPR013223 Ribonuclease B, N-terminal OB domain Clo1313_2086 IPR040476 RNase II/RNase R, cold shock domain Clo1313_2086 IPR011129 Cold shock domain Clo1313_2086 IPR022966 Ribonuclease II/R, conserved site Clo1313_2086 IPR004476 Ribonuclease II/ribonuclease R Clo1313_2086 IPR011805 Ribonuclease R Clo1313_2086 IPR022967 RNA-binding domain, S1 Clo1313_2086 IPR001900 Ribonuclease II/R Clo1313_2086 IPR012340 Nucleic acid-binding, OB-fold Clo1313_2086 IPR003029 S1 domain Clo1313_2087 IPR002686 Transposase IS200-like Clo1313_2087 IPR036515 Transposase IS200-like superfamily Clo1313_2090 IPR020810 Enolase, C-terminal TIM barrel domain Clo1313_2090 IPR036849 Enolase-like, C-terminal domain superfamily Clo1313_2090 IPR000941 Enolase Clo1313_2090 IPR020811 Enolase, N-terminal Clo1313_2090 IPR029017 Enolase-like, N-terminal Clo1313_2090 IPR020809 Enolase, conserved site Clo1313_2091 IPR000160 GGDEF domain Clo1313_2091 IPR003607 HD/PDEase domain Clo1313_2091 IPR037522 HD-GYP domain Clo1313_2091 IPR029787 Nucleotide cyclase Clo1313_2091 IPR006674 HD domain Clo1313_2092 IPR006124 Metalloenzyme Clo1313_2092 IPR017850 Alkaline-phosphatase-like, core domain superfamily Clo1313_2092 IPR011258 BPG-independent PGAM, N-terminal Clo1313_2092 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent Clo1313_2092 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily Clo1313_2093 IPR020861 Triosephosphate isomerase, active site Clo1313_2093 IPR000652 Triosephosphate isomerase Clo1313_2093 IPR035990 Triosephosphate isomerase superfamily Clo1313_2093 IPR013785 Aldolase-type TIM barrel Clo1313_2093 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic Clo1313_2094 IPR001576 Phosphoglycerate kinase Clo1313_2094 IPR015911 Phosphoglycerate kinase, conserved site Clo1313_2094 IPR015824 Phosphoglycerate kinase, N-terminal Clo1313_2094 IPR036043 Phosphoglycerate kinase superfamily Clo1313_2095 IPR036291 NAD(P)-binding domain superfamily Clo1313_2095 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I Clo1313_2095 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain Clo1313_2095 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site Clo1313_2095 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family Clo1313_2095 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain Clo1313_2097 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Clo1313_2097 IPR016039 Thiolase-like Clo1313_2097 IPR009081 Phosphopantetheine binding ACP domain Clo1313_2097 IPR020806 Polyketide synthase, phosphopantetheine-binding domain Clo1313_2097 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Clo1313_2097 IPR014030 Beta-ketoacyl synthase, N-terminal Clo1313_2097 IPR032821 Ketoacyl-synthetase, C-terminal extension Clo1313_2097 IPR018201 Beta-ketoacyl synthase, active site Clo1313_2097 IPR014031 Beta-ketoacyl synthase, C-terminal Clo1313_2097 IPR036736 ACP-like superfamily Clo1313_2097 IPR014043 Acyl transferase Clo1313_2097 IPR001227 Acyl transferase domain superfamily Clo1313_2097 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Clo1313_2097 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Clo1313_2097 IPR001242 Condensation domain Clo1313_2099 IPR025110 AMP-binding enzyme, C-terminal domain Clo1313_2099 IPR020845 AMP-binding, conserved site Clo1313_2099 IPR000873 AMP-dependent synthetase/ligase Clo1313_2099 IPR042099 AMP-dependent synthetase-like superfamily Clo1313_2100 IPR016039 Thiolase-like Clo1313_2100 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Clo1313_2100 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 Clo1313_2100 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal Clo1313_2101 IPR036736 ACP-like superfamily Clo1313_2101 IPR003231 Acyl carrier protein (ACP) Clo1313_2101 IPR009081 Phosphopantetheine binding ACP domain Clo1313_2102 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Clo1313_2102 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal Clo1313_2102 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 Clo1313_2102 IPR016039 Thiolase-like Clo1313_2103 IPR001789 Signal transduction response regulator, receiver domain Clo1313_2103 IPR011006 CheY-like superfamily Clo1313_2103 IPR003607 HD/PDEase domain Clo1313_2103 IPR006674 HD domain Clo1313_2103 IPR037522 HD-GYP domain Clo1313_2104 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Clo1313_2104 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase Clo1313_2104 IPR029028 Alpha/beta knot methyltransferases Clo1313_2104 IPR001537 tRNA/rRNA methyltransferase, SpoU type Clo1313_2106 IPR025914 Stage V sporulation protein AE Clo1313_2107 IPR005562 SpoVA Clo1313_2107 IPR014204 Sporulation stage V, protein AE Clo1313_2109 IPR014203 Sporulation stage V, protein AC Clo1313_2109 IPR005562 SpoVA Clo1313_2111 IPR014284 RNA polymerase sigma-70 like domain Clo1313_2111 IPR014322 RNA polymerase sigma-B/F/G type Clo1313_2111 IPR014236 RNA polymerase sigma-F type Clo1313_2111 IPR000943 RNA polymerase sigma-70 Clo1313_2111 IPR007627 RNA polymerase sigma-70 region 2 Clo1313_2111 IPR007624 RNA polymerase sigma-70 region 3 Clo1313_2111 IPR007630 RNA polymerase sigma-70 region 4 Clo1313_2111 IPR013325 RNA polymerase sigma factor, region 2 Clo1313_2111 IPR013324 RNA polymerase sigma factor, region 3/4-like Clo1313_2111 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_2112 IPR010194 Anti-sigma F factor Clo1313_2112 IPR003594 Histidine kinase/HSP90-like ATPase Clo1313_2112 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clo1313_2113 IPR036513 STAS domain superfamily Clo1313_2113 IPR014237 Anti-sigma F factor antagonist Clo1313_2113 IPR002645 STAS domain Clo1313_2113 IPR003658 Anti-sigma factor antagonist Clo1313_2114 IPR000032 Phosphocarrier protein HPr-like Clo1313_2114 IPR035895 HPr-like superfamily Clo1313_2114 IPR002114 Phosphotransferase system, HPr serine phosphorylation site Clo1313_2115 IPR027434 Homing endonuclease Clo1313_2115 IPR018478 Sporulation transcription regulator WhiA, N-terminal domain Clo1313_2115 IPR003802 Sporulation regulator WhiA Clo1313_2115 IPR023054 Sporulation regulator WhiA, C-terminal Clo1313_2115 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_2115 IPR039518 WhiA, LAGLIDADG-like domain Clo1313_2117 IPR038136 Gluconeogenesis factor superfamily Clo1313_2117 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 Clo1313_2117 IPR010119 Gluconeogenesis factor Clo1313_2118 IPR005337 RapZ-like family Clo1313_2118 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_2119 IPR016166 FAD-binding domain, PCMH-type Clo1313_2119 IPR036318 FAD-binding, type PCMH-like superfamily Clo1313_2119 IPR016167 FAD-binding, type PCMH, subdomain 1 Clo1313_2119 IPR016169 FAD-binding, type PCMH, subdomain 2 Clo1313_2119 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase Clo1313_2119 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal Clo1313_2119 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily Clo1313_2119 IPR006094 FAD linked oxidase, N-terminal Clo1313_2120 IPR023710 Probable phosphatase YcdX Clo1313_2120 IPR004013 PHP domain Clo1313_2120 IPR003141 Polymerase/histidinol phosphatase, N-terminal Clo1313_2120 IPR016195 Polymerase/histidinol phosphatase-like Clo1313_2121 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily Clo1313_2121 IPR011104 HPr kinase/phosphorylase, C-terminal Clo1313_2121 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal Clo1313_2121 IPR003755 HPr(Ser) kinase/phosphorylase Clo1313_2124 IPR034964 Lumazine synthase Clo1313_2124 IPR002180 Lumazine/riboflavin synthase Clo1313_2124 IPR036467 Lumazine/riboflavin synthase superfamily Clo1313_2125 IPR000926 GTP cyclohydrolase II, RibA Clo1313_2125 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Clo1313_2125 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB Clo1313_2125 IPR032677 GTP cyclohydrolase II Clo1313_2125 IPR036144 RibA-like superfamily Clo1313_2125 IPR016299 Riboflavin biosynthesis protein RibBA Clo1313_2126 IPR017938 Riboflavin synthase-like beta-barrel Clo1313_2126 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily Clo1313_2126 IPR001783 Lumazine-binding protein Clo1313_2126 IPR026017 Lumazine-binding domain Clo1313_2127 IPR004794 Riboflavin biosynthesis protein RibD Clo1313_2127 IPR011549 Riboflavin-specific deaminase, C-terminal Clo1313_2127 IPR024072 Dihydrofolate reductase-like domain superfamily Clo1313_2127 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal Clo1313_2127 IPR002125 Cytidine and deoxycytidylate deaminase domain Clo1313_2127 IPR016192 APOBEC/CMP deaminase, zinc-binding Clo1313_2127 IPR016193 Cytidine deaminase-like Clo1313_2128 IPR001602 Uncharacterised protein family UPF0047 Clo1313_2128 IPR035917 YjbQ-like superfamily Clo1313_2129 IPR022272 Lipocalin family conserved site Clo1313_2129 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clo1313_2129 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type Clo1313_2130 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA Clo1313_2130 IPR018211 Alcohol dehydrogenase, iron-type, conserved site Clo1313_2132 IPR029041 FAD-linked oxidoreductase-like Clo1313_2132 IPR004621 Eukaryotic-type methylenetetrahydrofolate reductase Clo1313_2132 IPR003171 Methylenetetrahydrofolate reductase Clo1313_2132 IPR004620 5,10-methylenetetrahydrofolate reductase Clo1313_2133 IPR008915 Peptidase M50 Clo1313_2133 IPR016483 Uncharacterised conserved protein UCP006404, peptidase M50/CBS Clo1313_2133 IPR000644 CBS domain Clo1313_2134 IPR011055 Duplicated hybrid motif Clo1313_2134 IPR016047 Peptidase M23 Clo1313_2135 IPR005370 Uncharacterised protein family UPF0180 Clo1313_2136 IPR004363 Methylglyoxal synthase Clo1313_2136 IPR018148 Methylglyoxal synthase, active site Clo1313_2136 IPR011607 Methylglyoxal synthase-like domain Clo1313_2136 IPR036914 Methylglyoxal synthase-like domain superfamily Clo1313_2137 IPR005527 Cell division topological specificity factor MinE Clo1313_2137 IPR036707 Cell division topological specificity factor MinE superfamily Clo1313_2138 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Clo1313_2138 IPR010223 ATP binding protein MinD, bacterial-type Clo1313_2138 IPR025501 ATP binding protein MinD Clo1313_2138 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_2139 IPR013033 Septum formation inhibitor MinC Clo1313_2139 IPR005526 Septum formation inhibitor MinC, C-terminal Clo1313_2139 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily Clo1313_2139 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal Clo1313_2140 IPR001460 Penicillin-binding protein, transpeptidase Clo1313_2140 IPR036138 Penicillin-binding protein, dimerisation domain superfamily Clo1313_2140 IPR005311 Penicillin-binding protein, dimerisation domain Clo1313_2140 IPR012338 Beta-lactamase/transpeptidase-like Clo1313_2143 IPR004753 Cell shape determining protein MreB Clo1313_2144 IPR029001 Inosine triphosphate pyrophosphatase-like Clo1313_2144 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein Clo1313_2146 IPR038471 MecA, C-terminal domain superfamily Clo1313_2146 IPR008681 Negative regulator of genetic competence, MecA Clo1313_2149 IPR020568 Ribosomal protein S5 domain 2-type fold Clo1313_2149 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Clo1313_2149 IPR008268 Peptidase S16, active site Clo1313_2149 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_2149 IPR003111 Lon, substrate-binding domain Clo1313_2149 IPR027065 Lon protease Clo1313_2149 IPR015947 PUA-like superfamily Clo1313_2149 IPR004815 Lon protease, bacterial/eukaryotic-type Clo1313_2149 IPR027543 Lon protease, bacterial Clo1313_2149 IPR003959 ATPase, AAA-type, core Clo1313_2149 IPR003593 AAA+ ATPase domain Clo1313_2149 IPR008269 Peptidase S16, Lon proteolytic domain Clo1313_2150 IPR002813 Arginine biosynthesis protein ArgJ Clo1313_2150 IPR016117 ArgJ-like domain superfamily Clo1313_2150 IPR042195 ArgJ beta chain, C-terminal domain Clo1313_2151 IPR002545 CheW-like domain Clo1313_2151 IPR036061 CheW-like domain superfamily Clo1313_2151 IPR039315 Chemotaxis protein CheW Clo1313_2161 IPR013783 Immunoglobulin-like fold Clo1313_2161 IPR027390 Endoglucanase F, domain 3 Clo1313_2161 IPR008928 Six-hairpin glycosidase superfamily Clo1313_2161 IPR012341 Six-hairpin glycosidase-like superfamily Clo1313_2161 IPR005102 Carbohydrate binding X2 domain Clo1313_2161 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clo1313_2161 IPR001956 Carbohydrate-binding module 3 Clo1313_2161 IPR036966 Carbohydrate-binding module 3 superfamily Clo1313_2161 IPR023309 Endoglucanase F, domain 2 Clo1313_2161 IPR014756 Immunoglobulin E-set Clo1313_2161 IPR000556 Glycoside hydrolase, 48F Clo1313_2162 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb Clo1313_2162 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type Clo1313_2162 IPR004522 Asparagine-tRNA ligase Clo1313_2162 IPR012340 Nucleic acid-binding, OB-fold Clo1313_2162 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) Clo1313_2162 IPR006195 Aminoacyl-tRNA synthetase, class II Clo1313_2163 IPR006195 Aminoacyl-tRNA synthetase, class II Clo1313_2163 IPR004618 Aspartate--ammonia ligase Clo1313_2164 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site Clo1313_2164 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain Clo1313_2164 IPR029000 Cyclophilin-like domain superfamily Clo1313_2164 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase Clo1313_2165 IPR029035 DHS-like NAD/FAD-binding domain superfamily Clo1313_2165 IPR026591 Sirtuin, catalytic core small domain superfamily Clo1313_2165 IPR028628 Sirtuin, class U Clo1313_2165 IPR026590 Sirtuin family, catalytic core domain Clo1313_2165 IPR003000 Sirtuin family Clo1313_2168 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein Clo1313_2168 IPR003841 Sodium-dependent phosphate transport protein Clo1313_2170 IPR012160 Lipoteichoic acid synthase-like Clo1313_2170 IPR017850 Alkaline-phosphatase-like, core domain superfamily Clo1313_2170 IPR000917 Sulfatase, N-terminal Clo1313_2171 IPR003784 BioY protein Clo1313_2172 IPR011115 SecA DEAD-like, N-terminal Clo1313_2172 IPR014018 SecA motor DEAD Clo1313_2172 IPR011130 SecA, preprotein cross-linking domain Clo1313_2172 IPR011116 SecA Wing/Scaffold Clo1313_2172 IPR036266 SecA, Wing/Scaffold superfamily Clo1313_2172 IPR036670 SecA, preprotein cross-linking domain superfamily Clo1313_2172 IPR020937 SecA conserved site Clo1313_2172 IPR004027 SEC-C motif Clo1313_2172 IPR000185 Protein translocase subunit SecA Clo1313_2172 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_2173 IPR036966 Carbohydrate-binding module 3 superfamily Clo1313_2173 IPR001956 Carbohydrate-binding module 3 Clo1313_2173 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clo1313_2173 IPR024449 Anti-sigma factor RsgI, N-terminal Clo1313_2174 IPR013325 RNA polymerase sigma factor, region 2 Clo1313_2174 IPR014244 RNA polymerase sigma-I type Clo1313_2176 IPR003343 Bacterial Ig-like, group 2 Clo1313_2176 IPR029062 Class I glutamine amidotransferase-like Clo1313_2176 IPR013783 Immunoglobulin-like fold Clo1313_2176 IPR008964 Invasin/intimin cell-adhesion fragments Clo1313_2178 IPR013783 Immunoglobulin-like fold Clo1313_2178 IPR017853 Glycoside hydrolase superfamily Clo1313_2178 IPR003790 Glycosyl hydrolase-like 10 Clo1313_2178 IPR013785 Aldolase-type TIM barrel Clo1313_2179 IPR000788 Ribonucleotide reductase large subunit, C-terminal Clo1313_2179 IPR013509 Ribonucleotide reductase large subunit, N-terminal Clo1313_2179 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent Clo1313_2179 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal Clo1313_2179 IPR005144 ATP-cone domain Clo1313_2188 IPR016134 Dockerin domain Clo1313_2188 IPR036439 Dockerin domain superfamily Clo1313_2188 IPR006584 Cellulose binding, type IV Clo1313_2188 IPR029058 Alpha/Beta hydrolase fold Clo1313_2188 IPR000801 Putative esterase Clo1313_2188 IPR031158 Glycosyl hydrolases family 10, active site Clo1313_2188 IPR001000 Glycoside hydrolase family 10 domain Clo1313_2188 IPR008979 Galactose-binding-like domain superfamily Clo1313_2188 IPR018247 EF-Hand 1, calcium-binding site Clo1313_2188 IPR017853 Glycoside hydrolase superfamily Clo1313_2188 IPR002105 Dockerin type I repeat Clo1313_2188 IPR005084 Carbohydrate binding module family 6 Clo1313_2189 IPR012341 Six-hairpin glycosidase-like superfamily Clo1313_2189 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clo1313_2189 IPR001956 Carbohydrate-binding module 3 Clo1313_2189 IPR036966 Carbohydrate-binding module 3 superfamily Clo1313_2189 IPR001701 Glycoside hydrolase family 9 Clo1313_2189 IPR033126 Glycosyl hydrolases family 9, Asp/Glu active sites Clo1313_2189 IPR018221 Glycoside hydrolase family 9, His active site Clo1313_2189 IPR008928 Six-hairpin glycosidase superfamily Clo1313_2190 IPR006073 GTP binding domain Clo1313_2190 IPR032859 GTPase Der, C-terminal KH-domain-like Clo1313_2190 IPR015946 K homology domain-like, alpha/beta Clo1313_2190 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_2190 IPR005225 Small GTP-binding protein domain Clo1313_2190 IPR031166 EngA-type guanine nucleotide-binding (G) domain Clo1313_2190 IPR016484 GTP-binding protein EngA Clo1313_2192 IPR018221 Glycoside hydrolase family 9, His active site Clo1313_2192 IPR036966 Carbohydrate-binding module 3 superfamily Clo1313_2192 IPR001956 Carbohydrate-binding module 3 Clo1313_2192 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clo1313_2192 IPR012341 Six-hairpin glycosidase-like superfamily Clo1313_2192 IPR008928 Six-hairpin glycosidase superfamily Clo1313_2192 IPR033126 Glycosyl hydrolases family 9, Asp/Glu active sites Clo1313_2192 IPR001701 Glycoside hydrolase family 9 Clo1313_2193 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Clo1313_2193 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain Clo1313_2193 IPR004090 Chemotaxis methyl-accepting receptor Clo1313_2193 IPR003660 HAMP domain Clo1313_2194 IPR002545 CheW-like domain Clo1313_2194 IPR036061 CheW-like domain superfamily Clo1313_2194 IPR039315 Chemotaxis protein CheW Clo1313_2195 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Clo1313_2195 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain Clo1313_2195 IPR003660 HAMP domain Clo1313_2195 IPR004090 Chemotaxis methyl-accepting receptor Clo1313_2196 IPR002545 CheW-like domain Clo1313_2196 IPR036061 CheW-like domain superfamily Clo1313_2196 IPR039315 Chemotaxis protein CheW Clo1313_2197 IPR002068 Alpha crystallin/Hsp20 domain Clo1313_2197 IPR008978 HSP20-like chaperone Clo1313_2198 IPR016100 Prismane, alpha-bundle Clo1313_2198 IPR011254 Prismane-like superfamily Clo1313_2198 IPR016099 Prismane-like, alpha/beta-sandwich Clo1313_2198 IPR010048 Hydroxylamine reductase Clo1313_2198 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase Clo1313_2199 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clo1313_2199 IPR009016 Iron hydrogenase Clo1313_2199 IPR013352 Iron hydrogenase, subset Clo1313_2199 IPR036991 Iron hydrogenase, small subunit superfamily Clo1313_2199 IPR003149 Iron hydrogenase, small subunit Clo1313_2199 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clo1313_2199 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding Clo1313_2199 IPR036010 2Fe-2S ferredoxin-like superfamily Clo1313_2199 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain Clo1313_2199 IPR004108 Iron hydrogenase, large subunit, C-terminal Clo1313_2201 IPR005225 Small GTP-binding protein domain Clo1313_2201 IPR035650 Tetracycline resistance protein, C-terminal Clo1313_2201 IPR000640 Elongation factor EFG, domain V-like Clo1313_2201 IPR000795 Transcription factor, GTP-binding domain Clo1313_2201 IPR009000 Translation protein, beta-barrel domain superfamily Clo1313_2201 IPR005517 Translation elongation factor EFG/EF2, domain IV Clo1313_2201 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Clo1313_2201 IPR020568 Ribosomal protein S5 domain 2-type fold Clo1313_2201 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_2201 IPR041095 Elongation Factor G, domain II Clo1313_2201 IPR035647 EF-G domain III/V-like Clo1313_2201 IPR031157 Tr-type G domain, conserved site Clo1313_2202 IPR022790 Glycosyl hydrolase family 26 domain Clo1313_2202 IPR000805 Glycoside hydrolase family 26 Clo1313_2202 IPR026444 Secretion system C-terminal sorting domain Clo1313_2202 IPR017853 Glycoside hydrolase superfamily Clo1313_2202 IPR005084 Carbohydrate binding module family 6 Clo1313_2202 IPR008979 Galactose-binding-like domain superfamily Clo1313_2207 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA Clo1313_2207 IPR015424 Pyridoxal phosphate-dependent transferase Clo1313_2207 IPR005814 Aminotransferase class-III Clo1313_2207 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Clo1313_2207 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Clo1313_2208 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC Clo1313_2208 IPR025714 Methyltransferase domain Clo1313_2208 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clo1313_2209 IPR029058 Alpha/Beta hydrolase fold Clo1313_2209 IPR000073 Alpha/beta hydrolase fold-1 Clo1313_2209 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase Clo1313_2209 IPR000639 Epoxide hydrolase-like Clo1313_2210 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Clo1313_2210 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Clo1313_2210 IPR004839 Aminotransferase, class I/classII Clo1313_2210 IPR015424 Pyridoxal phosphate-dependent transferase Clo1313_2210 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type Clo1313_2210 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site Clo1313_2211 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_2211 IPR004472 Dethiobiotin synthase BioD Clo1313_2212 IPR013785 Aldolase-type TIM barrel Clo1313_2212 IPR010722 Biotin and thiamin synthesis-associated domain Clo1313_2212 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB Clo1313_2212 IPR024177 Biotin synthase Clo1313_2212 IPR006638 Elp3/MiaB/NifB Clo1313_2212 IPR007197 Radical SAM Clo1313_2214 IPR011435 Na(+), Li(+), K(+)/H(+) antiporter subunit A/B Clo1313_2216 IPR032291 Extracellular endo-alpha-(1->5)-L-arabinanase, C-terminal Clo1313_2216 IPR006710 Glycoside hydrolase, family 43 Clo1313_2216 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Clo1313_2224 IPR001207 Transposase, mutator type Clo1313_2228 IPR024706 Peroxiredoxin, AhpC-type Clo1313_2228 IPR036249 Thioredoxin-like superfamily Clo1313_2228 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant Clo1313_2228 IPR013766 Thioredoxin domain Clo1313_2232 IPR039425 RNA polymerase sigma-70 like Clo1313_2232 IPR014284 RNA polymerase sigma-70 like domain Clo1313_2232 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site Clo1313_2232 IPR007627 RNA polymerase sigma-70 region 2 Clo1313_2232 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 Clo1313_2232 IPR013325 RNA polymerase sigma factor, region 2 Clo1313_2232 IPR013324 RNA polymerase sigma factor, region 3/4-like Clo1313_2232 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_2234 IPR005087 Carbohydrate binding module family 11 Clo1313_2234 IPR002105 Dockerin type I repeat Clo1313_2234 IPR016134 Dockerin domain Clo1313_2234 IPR036439 Dockerin domain superfamily Clo1313_2234 IPR008979 Galactose-binding-like domain superfamily Clo1313_2234 IPR001547 Glycoside hydrolase, family 5 Clo1313_2234 IPR018087 Glycoside hydrolase, family 5, conserved site Clo1313_2234 IPR017853 Glycoside hydrolase superfamily Clo1313_2234 IPR022790 Glycosyl hydrolase family 26 domain Clo1313_2235 IPR005025 NADPH-dependent FMN reductase-like Clo1313_2235 IPR029039 Flavoprotein-like superfamily Clo1313_2238 IPR016185 Pre-ATP-grasp domain superfamily Clo1313_2238 IPR036914 Methylglyoxal synthase-like domain superfamily Clo1313_2238 IPR011607 Methylglyoxal synthase-like domain Clo1313_2238 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain Clo1313_2238 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain Clo1313_2238 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily Clo1313_2238 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain Clo1313_2238 IPR011761 ATP-grasp fold Clo1313_2238 IPR006275 Carbamoyl-phosphate synthase, large subunit Clo1313_2238 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain Clo1313_2239 IPR011962 dCTP deaminase Clo1313_2239 IPR029054 dUTPase-like Clo1313_2239 IPR036157 dUTPase-like superfamily Clo1313_2239 IPR033704 dUTPase, trimeric Clo1313_2240 IPR009057 Homeobox-like domain superfamily Clo1313_2240 IPR001647 DNA-binding HTH domain, TetR-type Clo1313_2240 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Clo1313_2242 IPR000731 Sterol-sensing domain Clo1313_2242 IPR004869 Membrane transport protein MMPL domain Clo1313_2244 IPR036412 HAD-like superfamily Clo1313_2244 IPR006379 HAD-superfamily hydrolase, subfamily IIB Clo1313_2244 IPR023214 HAD superfamily Clo1313_2244 IPR000150 Cof family Clo1313_2247 IPR012349 FMN-binding split barrel Clo1313_2247 IPR002563 Flavin reductase like domain Clo1313_2247 IPR008254 Flavodoxin/nitric oxide synthase Clo1313_2247 IPR029039 Flavoprotein-like superfamily Clo1313_2247 IPR001279 Metallo-beta-lactamase Clo1313_2247 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Clo1313_2248 IPR003561 Mutator MutT Clo1313_2248 IPR020476 NUDIX hydrolase Clo1313_2248 IPR015797 NUDIX hydrolase-like domain superfamily Clo1313_2248 IPR020084 NUDIX hydrolase, conserved site Clo1313_2248 IPR000086 NUDIX hydrolase domain Clo1313_2250 IPR033479 Double Cache domain 1 Clo1313_2250 IPR003660 HAMP domain Clo1313_2250 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Clo1313_2250 IPR029151 Periplasmic sensor-like domain superfamily Clo1313_2250 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding Clo1313_2255 IPR005149 Transcription regulator PadR, N-terminal Clo1313_2255 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_2255 IPR036390 Winged helix DNA-binding domain superfamily Clo1313_2255 IPR018309 Transcription regulator PadR, C-terminal Clo1313_2256 IPR000620 EamA domain Clo1313_2259 IPR004090 Chemotaxis methyl-accepting receptor Clo1313_2259 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Clo1313_2259 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain Clo1313_2259 IPR003660 HAMP domain Clo1313_2260 IPR029020 Ammonium/urea transporter Clo1313_2260 IPR001905 Ammonium transporter Clo1313_2260 IPR018047 Ammonium transporter, conserved site Clo1313_2260 IPR024041 Ammonium transporter AmtB-like domain Clo1313_2261 IPR036640 ABC transporter type 1, transmembrane domain superfamily Clo1313_2261 IPR011527 ABC transporter type 1, transmembrane domain Clo1313_2261 IPR003439 ABC transporter-like Clo1313_2261 IPR017871 ABC transporter, conserved site Clo1313_2261 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_2261 IPR003593 AAA+ ATPase domain Clo1313_2261 IPR039421 Type I protein exporter Clo1313_2262 IPR011527 ABC transporter type 1, transmembrane domain Clo1313_2262 IPR039421 Type I protein exporter Clo1313_2262 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_2262 IPR017871 ABC transporter, conserved site Clo1313_2262 IPR003439 ABC transporter-like Clo1313_2262 IPR036640 ABC transporter type 1, transmembrane domain superfamily Clo1313_2262 IPR003593 AAA+ ATPase domain Clo1313_2266 IPR001119 S-layer homology domain Clo1313_2266 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clo1313_2266 IPR002102 Cellulosome anchoring protein, cohesin domain Clo1313_2270 IPR006504 Transcriptional regulator Spx/MgsR Clo1313_2270 IPR036249 Thioredoxin-like superfamily Clo1313_2270 IPR006660 Arsenate reductase-like Clo1313_2272 IPR036291 NAD(P)-binding domain superfamily Clo1313_2272 IPR002347 Short-chain dehydrogenase/reductase SDR Clo1313_2272 IPR020904 Short-chain dehydrogenase/reductase, conserved site Clo1313_2273 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clo1313_2273 IPR002941 DNA methylase N-4/N-6 Clo1313_2273 IPR002052 DNA methylase, N-6 adenine-specific, conserved site Clo1313_2273 IPR001091 Restriction/modification DNA-methylase Clo1313_2274 IPR021191 Restriction endonuclease, type II, DpmII Clo1313_2274 IPR007637 Restriction endonuclease, type II, DpmII-like Clo1313_2275 IPR023095 Adenine-specific methyltransferase, domain 2 Clo1313_2275 IPR012263 Adenine modification methylase, M.EcoRV-type Clo1313_2275 IPR012327 D12 class N6 adenine-specific DNA methyltransferase Clo1313_2275 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clo1313_2278 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain Clo1313_2278 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_2278 IPR004881 Ribosome biogenesis GTPase RsgA Clo1313_2278 IPR010914 RsgA GTPase domain Clo1313_2283 IPR023542 rRNA large subunit methyltransferase I Clo1313_2283 IPR002478 PUA domain Clo1313_2283 IPR015947 PUA-like superfamily Clo1313_2283 IPR036974 PUA domain superfamily Clo1313_2283 IPR041532 RlmI, PUA-like domain Clo1313_2283 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clo1313_2283 IPR019614 S-adenosylmethionine-dependent methyltransferase Clo1313_2291 IPR027022 ABC transporter permease protein, BceB-type Clo1313_2291 IPR003838 ABC transporter permease protein domain Clo1313_2292 IPR003593 AAA+ ATPase domain Clo1313_2292 IPR003439 ABC transporter-like Clo1313_2292 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_2293 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Clo1313_2293 IPR005467 Histidine kinase domain Clo1313_2293 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Clo1313_2293 IPR003594 Histidine kinase/HSP90-like ATPase Clo1313_2293 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clo1313_2294 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_2294 IPR011006 CheY-like superfamily Clo1313_2294 IPR001867 OmpR/PhoB-type DNA-binding domain Clo1313_2294 IPR016032 Signal transduction response regulator, C-terminal effector Clo1313_2294 IPR001789 Signal transduction response regulator, receiver domain Clo1313_2294 IPR039420 Transcriptional regulatory protein WalR-like Clo1313_2300 IPR017871 ABC transporter, conserved site Clo1313_2300 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_2300 IPR003593 AAA+ ATPase domain Clo1313_2300 IPR003439 ABC transporter-like Clo1313_2300 IPR025302 Domain of unknown function DUF4162 Clo1313_2302 IPR001387 Cro/C1-type helix-turn-helix domain Clo1313_2302 IPR010982 Lambda repressor-like, DNA-binding domain superfamily Clo1313_2303 IPR022147 Glutamine synthetase type III N-terminal Clo1313_2303 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain Clo1313_2303 IPR027303 Glutamine synthetase, glycine-rich site Clo1313_2303 IPR008146 Glutamine synthetase, catalytic domain Clo1313_2303 IPR040577 Glutamine synthetase, C-terminal Clo1313_2304 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site Clo1313_2304 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain Clo1313_2304 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 Clo1313_2304 IPR042114 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 1 Clo1313_2304 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like Clo1313_2304 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic Clo1313_2304 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E Clo1313_2304 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit Clo1313_2304 IPR018027 Asn/Gln amidotransferase Clo1313_2305 IPR036928 Amidase signature (AS) superfamily Clo1313_2305 IPR000120 Amidase Clo1313_2305 IPR020556 Amidase, conserved site Clo1313_2305 IPR023631 Amidase signature domain Clo1313_2305 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit Clo1313_2306 IPR003837 Glu-tRNAGln amidotransferase C subunit Clo1313_2306 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C Clo1313_2307 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type Clo1313_2307 IPR012340 Nucleic acid-binding, OB-fold Clo1313_2307 IPR029351 GAD domain Clo1313_2307 IPR004115 GAD-like domain superfamily Clo1313_2307 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) Clo1313_2307 IPR004524 Aspartate-tRNA ligase, type 1 Clo1313_2307 IPR006195 Aminoacyl-tRNA synthetase, class II Clo1313_2307 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb Clo1313_2312 IPR029045 ClpP/crotonase-like domain superfamily Clo1313_2312 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site Clo1313_2312 IPR001753 Enoyl-CoA hydratase/isomerase Clo1313_2312 IPR014748 Enoyl-CoA hydratase, C-terminal Clo1313_2314 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC Clo1313_2314 IPR041698 Methyltransferase domain 25 Clo1313_2314 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clo1313_2319 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily Clo1313_2319 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site Clo1313_2319 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding Clo1313_2319 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Clo1313_2319 IPR023546 Methylated-DNA--protein-cysteine methyltransferase Clo1313_2319 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_2319 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain Clo1313_2321 IPR004872 Lipoprotein NlpA family Clo1313_2322 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Clo1313_2322 IPR035906 MetI-like superfamily Clo1313_2323 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_2323 IPR018449 NIL domain Clo1313_2323 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain Clo1313_2323 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal Clo1313_2323 IPR026253 Methionine import ATP-binding protein MetN Clo1313_2323 IPR003439 ABC transporter-like Clo1313_2323 IPR003593 AAA+ ATPase domain Clo1313_2323 IPR017871 ABC transporter, conserved site Clo1313_2324 IPR036390 Winged helix DNA-binding domain superfamily Clo1313_2324 IPR030489 Transcription regulator Rrf2-type, conserved site Clo1313_2324 IPR000944 Transcription regulator Rrf2-type Clo1313_2324 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_2325 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme Clo1313_2325 IPR015424 Pyridoxal phosphate-dependent transferase Clo1313_2325 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Clo1313_2325 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Clo1313_2326 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site Clo1313_2326 IPR001926 Pyridoxal-phosphate dependent enzyme Clo1313_2326 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Clo1313_2329 IPR003593 AAA+ ATPase domain Clo1313_2329 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_2329 IPR011924 Lipoprotein releasing system, ATP-binding protein Clo1313_2329 IPR015854 ABC transporter, lipoprotein release, LolD Clo1313_2329 IPR017871 ABC transporter, conserved site Clo1313_2329 IPR003439 ABC transporter-like Clo1313_2331 IPR005973 Nitrogenase MoFe cofactor biosynthesis protein NifE Clo1313_2331 IPR000510 Nitrogenase/oxidoreductase, component 1 Clo1313_2331 IPR000318 Nitrogenase component 1, conserved site Clo1313_2332 IPR010143 Nitrogenase component 1, alpha chain Clo1313_2332 IPR000510 Nitrogenase/oxidoreductase, component 1 Clo1313_2332 IPR000318 Nitrogenase component 1, conserved site Clo1313_2332 IPR005972 Nitrogenase molybdenum-iron protein alpha chain Clo1313_2333 IPR034165 FeMo cofactor biosynthesis protein NifB, C-terminal Clo1313_2333 IPR005980 Nitrogenase cofactor biosynthesis protein NifB Clo1313_2333 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site Clo1313_2333 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily Clo1313_2333 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis Clo1313_2333 IPR013785 Aldolase-type TIM barrel Clo1313_2333 IPR007197 Radical SAM Clo1313_2334 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily Clo1313_2334 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site Clo1313_2334 IPR005980 Nitrogenase cofactor biosynthesis protein NifB Clo1313_2334 IPR034165 FeMo cofactor biosynthesis protein NifB, C-terminal Clo1313_2334 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis Clo1313_2334 IPR013785 Aldolase-type TIM barrel Clo1313_2334 IPR007197 Radical SAM Clo1313_2335 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme Clo1313_2335 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Clo1313_2335 IPR015424 Pyridoxal phosphate-dependent transferase Clo1313_2335 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase Clo1313_2335 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Clo1313_2337 IPR035906 MetI-like superfamily Clo1313_2337 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Clo1313_2338 IPR003593 AAA+ ATPase domain Clo1313_2338 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB Clo1313_2338 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_2338 IPR017871 ABC transporter, conserved site Clo1313_2338 IPR003439 ABC transporter-like Clo1313_2339 IPR005977 Nitrogenase iron protein NifH Clo1313_2339 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_2339 IPR030655 NifH/chlL conserved site Clo1313_2339 IPR000392 NifH/frxC family Clo1313_2341 IPR018016 Nucleoside phosphorylase, conserved site Clo1313_2341 IPR035994 Nucleoside phosphorylase superfamily Clo1313_2341 IPR000845 Nucleoside phosphorylase domain Clo1313_2341 IPR004402 Purine nucleoside phosphorylase DeoD-type Clo1313_2342 IPR003760 ABC transporter substrate-binding protein PnrA-like Clo1313_2342 IPR028082 Periplasmic binding protein-like I Clo1313_2343 IPR016905 Glycyl radical enzyme, HI0521, predicted Clo1313_2344 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clo1313_2344 IPR023912 Putative glycyl-radical enzyme activating enzyme YjjW Clo1313_2344 IPR007197 Radical SAM Clo1313_2344 IPR012839 Organic radical enzyme activase Clo1313_2344 IPR034457 Organic radical-activating enzymes Clo1313_2344 IPR013785 Aldolase-type TIM barrel Clo1313_2344 IPR001989 Radical-activating enzyme, conserved site Clo1313_2344 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clo1313_2345 IPR003593 AAA+ ATPase domain Clo1313_2345 IPR003439 ABC transporter-like Clo1313_2345 IPR017871 ABC transporter, conserved site Clo1313_2345 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_2346 IPR002229 Blood group Rhesus C/E/D polypeptide Clo1313_2346 IPR001851 ABC transporter, permease Clo1313_2347 IPR001851 ABC transporter, permease Clo1313_2348 IPR016192 APOBEC/CMP deaminase, zinc-binding Clo1313_2348 IPR016193 Cytidine deaminase-like Clo1313_2348 IPR002125 Cytidine and deoxycytidylate deaminase domain Clo1313_2348 IPR006262 Cytidine deaminase, homotetrameric Clo1313_2349 IPR013785 Aldolase-type TIM barrel Clo1313_2349 IPR011343 Deoxyribose-phosphate aldolase Clo1313_2349 IPR002915 DeoC/FbaB/ lacD aldolase Clo1313_2349 IPR028581 Deoxyribose-phosphate aldolase type I Clo1313_2350 IPR009057 Homeobox-like domain superfamily Clo1313_2350 IPR018060 DNA binding HTH domain, AraC-type Clo1313_2350 IPR001789 Signal transduction response regulator, receiver domain Clo1313_2350 IPR011006 CheY-like superfamily Clo1313_2351 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clo1313_2351 IPR010559 Signal transduction histidine kinase, internal region Clo1313_2352 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Clo1313_2352 IPR035906 MetI-like superfamily Clo1313_2353 IPR003593 AAA+ ATPase domain Clo1313_2353 IPR003439 ABC transporter-like Clo1313_2353 IPR017871 ABC transporter, conserved site Clo1313_2353 IPR015853 ABC transporter, ferric cation import, FbpC Clo1313_2353 IPR008995 Molybdate/tungstate binding, C-terminal Clo1313_2353 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_2353 IPR013611 Transport-associated OB, type 2 Clo1313_2359 IPR018193 Glycerate kinase, flavodoxin-like fold Clo1313_2359 IPR004381 Glycerate kinase Clo1313_2359 IPR018197 Glycerate kinase, restriction-enzyme-like fold Clo1313_2359 IPR036129 Glycerate kinase superfamily Clo1313_2366 IPR038718 SNF2-like, N-terminal domain superfamily Clo1313_2366 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_2366 IPR001650 Helicase, C-terminal Clo1313_2366 IPR014001 Helicase superfamily 1/2, ATP-binding domain Clo1313_2366 IPR000330 SNF2-related, N-terminal domain Clo1313_2374 IPR020084 NUDIX hydrolase, conserved site Clo1313_2374 IPR015797 NUDIX hydrolase-like domain superfamily Clo1313_2374 IPR000086 NUDIX hydrolase domain Clo1313_2374 IPR003561 Mutator MutT Clo1313_2374 IPR020476 NUDIX hydrolase Clo1313_2375 IPR001598 Transposase, IS30, conserved site Clo1313_2375 IPR001584 Integrase, catalytic core Clo1313_2375 IPR025246 Transposase IS30-like HTH domain Clo1313_2375 IPR012337 Ribonuclease H-like superfamily Clo1313_2375 IPR036397 Ribonuclease H superfamily Clo1313_2376 IPR025827 Recombinase zinc beta ribbon domain Clo1313_2376 IPR011109 DNA-binding recombinase domain Clo1313_2376 IPR038109 DNA-binding recombinase domain superfamily Clo1313_2378 IPR009057 Homeobox-like domain superfamily Clo1313_2378 IPR006118 Recombinase, conserved site Clo1313_2378 IPR006119 Resolvase, N-terminal catalytic domain Clo1313_2378 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily Clo1313_2378 IPR006120 Resolvase, HTH domain Clo1313_2380 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily Clo1313_2380 IPR002502 N-acetylmuramoyl-L-alanine amidase domain Clo1313_2380 IPR018392 LysM domain Clo1313_2380 IPR036779 LysM domain superfamily Clo1313_2380 IPR002477 Peptidoglycan binding-like Clo1313_2380 IPR036365 PGBD-like superfamily Clo1313_2380 IPR036366 PGBD superfamily Clo1313_2381 IPR006480 Bacteriophage holin family Clo1313_2396 IPR033135 ClpP, histidine active site Clo1313_2396 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA Clo1313_2396 IPR001907 ATP-dependent Clp protease proteolytic subunit Clo1313_2396 IPR029045 ClpP/crotonase-like domain superfamily Clo1313_2397 IPR006944 Bacteriophage/Gene transfer agent portal protein Clo1313_2398 IPR005021 Terminase large subunit, Lambdalikevirus-type Clo1313_2398 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_2398 IPR036390 Winged helix DNA-binding domain superfamily Clo1313_2405 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clo1313_2405 IPR002941 DNA methylase N-4/N-6 Clo1313_2405 IPR002052 DNA methylase, N-6 adenine-specific, conserved site Clo1313_2405 IPR001091 Restriction/modification DNA-methylase Clo1313_2406 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clo1313_2406 IPR002052 DNA methylase, N-6 adenine-specific, conserved site Clo1313_2406 IPR001091 Restriction/modification DNA-methylase Clo1313_2406 IPR002941 DNA methylase N-4/N-6 Clo1313_2414 IPR003593 AAA+ ATPase domain Clo1313_2414 IPR003439 ABC transporter-like Clo1313_2414 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_2416 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal Clo1313_2416 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Clo1313_2416 IPR038318 KdpD, transmembrane domain superfamily Clo1313_2416 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Clo1313_2416 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Clo1313_2416 IPR025201 Sensor protein KdpD, transmembrane domain Clo1313_2416 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clo1313_2416 IPR003594 Histidine kinase/HSP90-like ATPase Clo1313_2416 IPR029016 GAF-like domain superfamily Clo1313_2416 IPR005467 Histidine kinase domain Clo1313_2417 IPR011006 CheY-like superfamily Clo1313_2417 IPR001867 OmpR/PhoB-type DNA-binding domain Clo1313_2417 IPR001789 Signal transduction response regulator, receiver domain Clo1313_2417 IPR039420 Transcriptional regulatory protein WalR-like Clo1313_2417 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_2418 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Clo1313_2418 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain Clo1313_2418 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain Clo1313_2418 IPR017782 Hydroxyacylglutathione hydrolase Clo1313_2418 IPR001279 Metallo-beta-lactamase Clo1313_2425 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clo1313_2425 IPR012340 Nucleic acid-binding, OB-fold Clo1313_2425 IPR010280 (Uracil-5)-methyltransferase family Clo1313_2425 IPR002792 TRAM domain Clo1313_2425 IPR030390 RNA methyltransferase TrmA, active site Clo1313_2426 IPR003439 ABC transporter-like Clo1313_2426 IPR017871 ABC transporter, conserved site Clo1313_2426 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_2426 IPR003593 AAA+ ATPase domain Clo1313_2427 IPR037294 ABC transporter, BtuC-like Clo1313_2427 IPR000522 ABC transporter, permease protein, BtuC-like Clo1313_2428 IPR002491 ABC transporter periplasmic binding domain Clo1313_2430 IPR018392 LysM domain Clo1313_2430 IPR011055 Duplicated hybrid motif Clo1313_2430 IPR013731 Opacity-associated protein A, N-terminal Clo1313_2430 IPR016047 Peptidase M23 Clo1313_2433 IPR012338 Beta-lactamase/transpeptidase-like Clo1313_2433 IPR001264 Glycosyl transferase, family 51 Clo1313_2433 IPR023346 Lysozyme-like domain superfamily Clo1313_2433 IPR036950 Penicillin binding protein transglycosylase domain Clo1313_2433 IPR001460 Penicillin-binding protein, transpeptidase Clo1313_2434 IPR003838 ABC transporter permease protein domain Clo1313_2434 IPR025857 MacB-like periplasmic core domain Clo1313_2434 IPR005085 Carbohydrate binding module family 25 Clo1313_2436 IPR003593 AAA+ ATPase domain Clo1313_2436 IPR003439 ABC transporter-like Clo1313_2436 IPR017871 ABC transporter, conserved site Clo1313_2436 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_2439 IPR036393 Acetylglutamate kinase-like superfamily Clo1313_2439 IPR001048 Aspartate/glutamate/uridylate kinase Clo1313_2439 IPR041739 Glutamate-5-kinase domain Clo1313_2439 IPR001057 Glutamate/acetylglutamate kinase Clo1313_2439 IPR011529 Glutamate 5-kinase Clo1313_2439 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase Clo1313_2439 IPR019797 Glutamate 5-kinase, conserved site Clo1313_2444 IPR009078 Ferritin-like superfamily Clo1313_2444 IPR012347 Ferritin-like Clo1313_2444 IPR009040 Ferritin-like diiron domain Clo1313_2444 IPR024934 Rubredoxin-like domain Clo1313_2444 IPR003251 Rubrerythrin Clo1313_2445 IPR003848 Domain of unknown function DUF218 Clo1313_2445 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clo1313_2446 IPR041699 Lon protease, AAA domain Clo1313_2446 IPR008269 Peptidase S16, Lon proteolytic domain Clo1313_2446 IPR027065 Lon protease Clo1313_2446 IPR020568 Ribosomal protein S5 domain 2-type fold Clo1313_2446 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Clo1313_2447 IPR000182 GNAT domain Clo1313_2447 IPR016181 Acyl-CoA N-acyltransferase Clo1313_2447 IPR006464 N-acetyltransferase RimI/Ard1 Clo1313_2448 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB Clo1313_2448 IPR000905 Gcp-like domain Clo1313_2449 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE Clo1313_2449 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_2450 IPR011059 Metal-dependent hydrolase, composite domain superfamily Clo1313_2450 IPR032466 Metal-dependent hydrolase Clo1313_2450 IPR006680 Amidohydrolase-related Clo1313_2450 IPR005920 Imidazolonepropionase Clo1313_2455 IPR000754 Ribosomal protein S9 Clo1313_2455 IPR020568 Ribosomal protein S5 domain 2-type fold Clo1313_2455 IPR023035 Ribosomal protein S9, bacterial/plastid Clo1313_2455 IPR020574 Ribosomal protein S9, conserved site Clo1313_2455 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Clo1313_2456 IPR005822 Ribosomal protein L13 Clo1313_2456 IPR005823 Ribosomal protein L13, bacterial-type Clo1313_2456 IPR023563 Ribosomal protein L13, conserved site Clo1313_2456 IPR036899 Ribosomal protein L13 superfamily Clo1313_2458 IPR038331 DisA, linker domain superfamily Clo1313_2458 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily Clo1313_2458 IPR018906 DNA integrity scanning, DisA, linker region Clo1313_2458 IPR003390 DNA integrity scanning protein, DisA, N-terminal Clo1313_2458 IPR023763 DNA integrity scanning protein, DisA Clo1313_2458 IPR010994 RuvA domain 2-like Clo1313_2459 IPR041166 LapB, rubredoxin metal binding domain Clo1313_2459 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Clo1313_2459 IPR020568 Ribosomal protein S5 domain 2-type fold Clo1313_2459 IPR003593 AAA+ ATPase domain Clo1313_2459 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain Clo1313_2459 IPR004504 DNA repair protein RadA Clo1313_2459 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_2461 IPR029044 Nucleotide-diphospho-sugar transferases Clo1313_2462 IPR003959 ATPase, AAA-type, core Clo1313_2462 IPR019489 Clp ATPase, C-terminal Clo1313_2462 IPR036628 Clp, N-terminal domain superfamily Clo1313_2462 IPR004176 Clp, N-terminal Clo1313_2462 IPR001270 ClpA/B family Clo1313_2462 IPR018368 ClpA/B, conserved site 1 Clo1313_2462 IPR003593 AAA+ ATPase domain Clo1313_2462 IPR028299 ClpA/B, conserved site 2 Clo1313_2462 IPR041546 ClpA/ClpB, AAA lid domain Clo1313_2462 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_2462 IPR001943 UVR domain Clo1313_2463 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain Clo1313_2463 IPR022415 ATP:guanido phosphotransferase active site Clo1313_2463 IPR022414 ATP:guanido phosphotransferase, catalytic domain Clo1313_2463 IPR023660 Protein arginine kinase Clo1313_2463 IPR000749 ATP:guanido phosphotransferase Clo1313_2464 IPR001943 UVR domain Clo1313_2464 IPR036876 UVR domain superfamily Clo1313_2464 IPR025542 YacH protein Clo1313_2465 IPR040465 CtsR, N-terminal HTH domain Clo1313_2465 IPR008463 Transcriptional regulator CtsR Clo1313_2465 IPR041473 CtsR, C-terminal dimerization domain Clo1313_2465 IPR041908 CtsR, C-terminal domain superfamily Clo1313_2465 IPR041902 CtsR, N-terminal domain superfamily Clo1313_2467 IPR005225 Small GTP-binding protein domain Clo1313_2467 IPR005517 Translation elongation factor EFG/EF2, domain IV Clo1313_2467 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Clo1313_2467 IPR009000 Translation protein, beta-barrel domain superfamily Clo1313_2467 IPR004540 Translation elongation factor EFG/EF2 Clo1313_2467 IPR000795 Transcription factor, GTP-binding domain Clo1313_2467 IPR020568 Ribosomal protein S5 domain 2-type fold Clo1313_2467 IPR035649 EFG, domain V Clo1313_2467 IPR031157 Tr-type G domain, conserved site Clo1313_2467 IPR004161 Translation elongation factor EFTu-like, domain 2 Clo1313_2467 IPR000640 Elongation factor EFG, domain V-like Clo1313_2467 IPR035647 EF-G domain III/V-like Clo1313_2467 IPR009022 Elongation factor G, domain III Clo1313_2467 IPR041095 Elongation Factor G, domain II Clo1313_2467 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_2468 IPR041071 DAHP synthase ferredoxin-like domain Clo1313_2468 IPR006268 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 Clo1313_2468 IPR013785 Aldolase-type TIM barrel Clo1313_2468 IPR006218 DAHP synthetase I/KDSA Clo1313_2469 IPR003099 Prephenate dehydrogenase Clo1313_2469 IPR002912 ACT domain Clo1313_2469 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily Clo1313_2469 IPR036291 NAD(P)-binding domain superfamily Clo1313_2470 IPR001986 Enolpyruvate transferase domain Clo1313_2470 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase Clo1313_2470 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site Clo1313_2470 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta Clo1313_2470 IPR036968 Enolpyruvate transferase domain superfamily Clo1313_2471 IPR003781 CoA-binding Clo1313_2471 IPR036291 NAD(P)-binding domain superfamily Clo1313_2471 IPR009718 Rex DNA-binding, C-terminal domain Clo1313_2471 IPR022876 Redox-sensing transcriptional repressor Rex Clo1313_2471 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_2471 IPR036390 Winged helix DNA-binding domain superfamily Clo1313_2472 IPR032524 ABC transporter Uup, C-terminal Clo1313_2472 IPR003593 AAA+ ATPase domain Clo1313_2472 IPR032781 ABC-transporter extension domain Clo1313_2472 IPR003439 ABC transporter-like Clo1313_2472 IPR017871 ABC transporter, conserved site Clo1313_2472 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_2472 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily Clo1313_2473 IPR041704 CFLE, GH18 catalytic domain Clo1313_2473 IPR011583 Chitinase II Clo1313_2473 IPR029070 Chitinase insertion domain superfamily Clo1313_2473 IPR001223 Glycoside hydrolase family 18, catalytic domain Clo1313_2473 IPR018392 LysM domain Clo1313_2473 IPR017853 Glycoside hydrolase superfamily Clo1313_2473 IPR036779 LysM domain superfamily Clo1313_2474 IPR003593 AAA+ ATPase domain Clo1313_2474 IPR003439 ABC transporter-like Clo1313_2474 IPR017871 ABC transporter, conserved site Clo1313_2474 IPR005876 Cobalt transport protein ATP-binding subunit Clo1313_2474 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_2475 IPR003339 ABC/ECF transporter, transmembrane component Clo1313_2475 IPR012809 Cobalt ECF transporter T component CbiQ Clo1313_2476 IPR002751 Metal transport protein CbiM/NikMN Clo1313_2476 IPR025937 PDGLE domain Clo1313_2477 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain Clo1313_2478 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_2478 IPR001867 OmpR/PhoB-type DNA-binding domain Clo1313_2478 IPR016032 Signal transduction response regulator, C-terminal effector Clo1313_2478 IPR011006 CheY-like superfamily Clo1313_2478 IPR001789 Signal transduction response regulator, receiver domain Clo1313_2478 IPR039420 Transcriptional regulatory protein WalR-like Clo1313_2479 IPR008969 Carboxypeptidase-like, regulatory domain superfamily Clo1313_2479 IPR001956 Carbohydrate-binding module 3 Clo1313_2479 IPR036966 Carbohydrate-binding module 3 superfamily Clo1313_2479 IPR002102 Cellulosome anchoring protein, cohesin domain Clo1313_2479 IPR002105 Dockerin type I repeat Clo1313_2479 IPR016134 Dockerin domain Clo1313_2479 IPR036439 Dockerin domain superfamily Clo1313_2479 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clo1313_2479 IPR018247 EF-Hand 1, calcium-binding site Clo1313_2483 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 Clo1313_2483 IPR039425 RNA polymerase sigma-70 like Clo1313_2483 IPR014284 RNA polymerase sigma-70 like domain Clo1313_2483 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site Clo1313_2483 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_2483 IPR013324 RNA polymerase sigma factor, region 3/4-like Clo1313_2483 IPR013325 RNA polymerase sigma factor, region 2 Clo1313_2483 IPR007627 RNA polymerase sigma-70 region 2 Clo1313_2484 IPR001460 Penicillin-binding protein, transpeptidase Clo1313_2484 IPR008756 Peptidase M56 Clo1313_2484 IPR012338 Beta-lactamase/transpeptidase-like Clo1313_2485 IPR005650 BlaI transcriptional regulatory family Clo1313_2485 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_2485 IPR036390 Winged helix DNA-binding domain superfamily Clo1313_2486 IPR002669 Urease accessory protein UreD Clo1313_2487 IPR003495 CobW/HypB/UreG, nucleotide-binding domain Clo1313_2487 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_2487 IPR004400 Urease accessory protein UreG Clo1313_2488 IPR002639 Urease accessory protein UreF Clo1313_2488 IPR038277 UreF domain superfamily Clo1313_2490 IPR006680 Amidohydrolase-related Clo1313_2490 IPR011059 Metal-dependent hydrolase, composite domain superfamily Clo1313_2490 IPR032466 Metal-dependent hydrolase Clo1313_2490 IPR011612 Urease alpha-subunit, N-terminal domain Clo1313_2490 IPR017950 Urease active site Clo1313_2490 IPR005848 Urease, alpha subunit Clo1313_2490 IPR017951 Urease alpha subunit, C-terminal Clo1313_2491 IPR036461 Urease, beta subunit superfamily Clo1313_2491 IPR002019 Urease, beta subunit Clo1313_2492 IPR012010 Urease, gamma subunit Clo1313_2492 IPR002026 Urease, gamma/gamma-beta subunit Clo1313_2492 IPR036463 Urease, gamma subunit superfamily Clo1313_2493 IPR003593 AAA+ ATPase domain Clo1313_2493 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein Clo1313_2493 IPR003439 ABC transporter-like Clo1313_2493 IPR017871 ABC transporter, conserved site Clo1313_2493 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_2494 IPR003593 AAA+ ATPase domain Clo1313_2494 IPR003439 ABC transporter-like Clo1313_2494 IPR017871 ABC transporter, conserved site Clo1313_2494 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal Clo1313_2494 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_2496 IPR001851 ABC transporter, permease Clo1313_2497 IPR028082 Periplasmic binding protein-like I Clo1313_2497 IPR000709 Leu/Ile/Val-binding protein Clo1313_2497 IPR039570 AmiC, periplasmic binding domain Clo1313_2498 IPR018060 DNA binding HTH domain, AraC-type Clo1313_2498 IPR009057 Homeobox-like domain superfamily Clo1313_2498 IPR011006 CheY-like superfamily Clo1313_2498 IPR001789 Signal transduction response regulator, receiver domain Clo1313_2499 IPR005467 Histidine kinase domain Clo1313_2499 IPR019247 Histidine kinase BarA, N-terminal Clo1313_2499 IPR036641 HPT domain superfamily Clo1313_2499 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Clo1313_2499 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Clo1313_2499 IPR003660 HAMP domain Clo1313_2499 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clo1313_2499 IPR003594 Histidine kinase/HSP90-like ATPase Clo1313_2499 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Clo1313_2499 IPR011006 CheY-like superfamily Clo1313_2499 IPR001789 Signal transduction response regulator, receiver domain Clo1313_2499 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Clo1313_2500 IPR013515 Phytochrome, central region Clo1313_2500 IPR003018 GAF domain Clo1313_2500 IPR001294 Phytochrome Clo1313_2500 IPR016132 Phytochrome chromophore attachment domain Clo1313_2500 IPR035965 PAS domain superfamily Clo1313_2500 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Clo1313_2500 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Clo1313_2500 IPR013654 PAS fold-2 Clo1313_2500 IPR005467 Histidine kinase domain Clo1313_2500 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clo1313_2500 IPR003594 Histidine kinase/HSP90-like ATPase Clo1313_2500 IPR029016 GAF-like domain superfamily Clo1313_2508 IPR001207 Transposase, mutator type Clo1313_2530 IPR036439 Dockerin domain superfamily Clo1313_2530 IPR017853 Glycoside hydrolase superfamily Clo1313_2530 IPR031158 Glycosyl hydrolases family 10, active site Clo1313_2530 IPR001000 Glycoside hydrolase family 10 domain Clo1313_2530 IPR008979 Galactose-binding-like domain superfamily Clo1313_2530 IPR018247 EF-Hand 1, calcium-binding site Clo1313_2530 IPR016134 Dockerin domain Clo1313_2530 IPR000801 Putative esterase Clo1313_2530 IPR003305 Carbohydrate-binding, CenC-like Clo1313_2530 IPR029058 Alpha/Beta hydrolase fold Clo1313_2530 IPR002105 Dockerin type I repeat Clo1313_2530 IPR002105 Dockerin type I repeat Clo1313_2530 IPR016134 Dockerin domain Clo1313_2530 IPR036439 Dockerin domain superfamily Clo1313_2530 IPR018247 EF-Hand 1, calcium-binding site Clo1313_2530 IPR003305 Carbohydrate-binding, CenC-like Clo1313_2530 IPR008979 Galactose-binding-like domain superfamily Clo1313_2530 IPR001000 Glycoside hydrolase family 10 domain Clo1313_2530 IPR031158 Glycosyl hydrolases family 10, active site Clo1313_2530 IPR017853 Glycoside hydrolase superfamily Clo1313_2530 IPR029058 Alpha/Beta hydrolase fold Clo1313_2530 IPR000801 Putative esterase Clo1313_2531 IPR010722 Biotin and thiamin synthesis-associated domain Clo1313_2531 IPR006638 Elp3/MiaB/NifB Clo1313_2531 IPR024021 [FeFe]-hydrogenase maturation HydE, radical SAM Clo1313_2531 IPR034422 HydE/PylB-like Clo1313_2531 IPR007197 Radical SAM Clo1313_2531 IPR013785 Aldolase-type TIM barrel Clo1313_2532 IPR001926 Pyridoxal-phosphate dependent enzyme Clo1313_2532 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Clo1313_2532 IPR005859 Cysteine synthase CysK Clo1313_2532 IPR005856 Cysteine synthase Clo1313_2532 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site Clo1313_2533 IPR005232 Pyridinium-3,5-bisthiocarboxylic acid mononucleotide synthase LarE Clo1313_2533 IPR022310 NAD/GMP synthase Clo1313_2533 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clo1313_2534 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Clo1313_2534 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme Clo1313_2534 IPR015424 Pyridoxal phosphate-dependent transferase Clo1313_2534 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase Clo1313_2534 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Clo1313_2535 IPR036390 Winged helix DNA-binding domain superfamily Clo1313_2535 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_2535 IPR000944 Transcription regulator Rrf2-type Clo1313_2535 IPR030489 Transcription regulator Rrf2-type, conserved site Clo1313_2536 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_2536 IPR000944 Transcription regulator Rrf2-type Clo1313_2536 IPR030489 Transcription regulator Rrf2-type, conserved site Clo1313_2536 IPR036390 Winged helix DNA-binding domain superfamily Clo1313_2537 IPR029062 Class I glutamine amidotransferase-like Clo1313_2537 IPR005697 Homoserine O-succinyltransferase MetA Clo1313_2537 IPR033752 MetA family Clo1313_2538 IPR013767 PAS fold Clo1313_2538 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Clo1313_2538 IPR000014 PAS domain Clo1313_2538 IPR003660 HAMP domain Clo1313_2538 IPR003594 Histidine kinase/HSP90-like ATPase Clo1313_2538 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clo1313_2538 IPR005467 Histidine kinase domain Clo1313_2538 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Clo1313_2538 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Clo1313_2538 IPR041328 ResE, histidine kinase sensor domain Clo1313_2538 IPR035965 PAS domain superfamily Clo1313_2539 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_2539 IPR039420 Transcriptional regulatory protein WalR-like Clo1313_2539 IPR001867 OmpR/PhoB-type DNA-binding domain Clo1313_2539 IPR016032 Signal transduction response regulator, C-terminal effector Clo1313_2539 IPR011006 CheY-like superfamily Clo1313_2539 IPR001789 Signal transduction response regulator, receiver domain Clo1313_2540 IPR023299 P-type ATPase, cytoplasmic domain N Clo1313_2540 IPR001757 P-type ATPase Clo1313_2540 IPR006121 Heavy metal-associated domain, HMA Clo1313_2540 IPR036163 Heavy metal-associated domain superfamily Clo1313_2540 IPR006122 Heavy metal-associated domain, copper ion-binding Clo1313_2540 IPR017969 Heavy-metal-associated, conserved site Clo1313_2540 IPR023214 HAD superfamily Clo1313_2540 IPR036412 HAD-like superfamily Clo1313_2540 IPR008250 P-type ATPase, A domain superfamily Clo1313_2540 IPR023298 P-type ATPase, transmembrane domain superfamily Clo1313_2540 IPR018303 P-type ATPase, phosphorylation site Clo1313_2540 IPR027256 P-type ATPase, subfamily IB Clo1313_2544 IPR000397 Heat shock protein Hsp33 Clo1313_2544 IPR016154 Heat shock protein Hsp33, C-terminal Clo1313_2544 IPR016153 Heat shock protein Hsp33, N-terminal Clo1313_2545 IPR012340 Nucleic acid-binding, OB-fold Clo1313_2545 IPR002059 Cold-shock protein, DNA-binding Clo1313_2545 IPR012156 Cold shock, CspA Clo1313_2545 IPR019844 Cold-shock (CSD) domain Clo1313_2545 IPR011129 Cold shock domain Clo1313_2546 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_2546 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Clo1313_2546 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding Clo1313_2549 IPR029045 ClpP/crotonase-like domain superfamily Clo1313_2549 IPR005151 Tail specific protease Clo1313_2549 IPR036366 PGBD superfamily Clo1313_2549 IPR036365 PGBD-like superfamily Clo1313_2549 IPR004447 C-terminal-processing peptidase S41A Clo1313_2549 IPR001478 PDZ domain Clo1313_2549 IPR036034 PDZ superfamily Clo1313_2549 IPR041489 PDZ domain 6 Clo1313_2549 IPR002477 Peptidoglycan binding-like Clo1313_2550 IPR036779 LysM domain superfamily Clo1313_2550 IPR011055 Duplicated hybrid motif Clo1313_2550 IPR018392 LysM domain Clo1313_2550 IPR016047 Peptidase M23 Clo1313_2551 IPR003838 ABC transporter permease protein domain Clo1313_2551 IPR004513 Cell division protein FtsX Clo1313_2551 IPR040690 FtsX, extracellular domain Clo1313_2552 IPR003439 ABC transporter-like Clo1313_2552 IPR017871 ABC transporter, conserved site Clo1313_2552 IPR003593 AAA+ ATPase domain Clo1313_2552 IPR005286 Cell division protein FtsE, ATP-binding Clo1313_2552 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_2553 IPR041522 CdaR, GGDEF-like domain Clo1313_2553 IPR008599 Putative sugar diacid recognition Clo1313_2553 IPR025736 PucR C-terminal helix-turn-helix domain Clo1313_2553 IPR042070 PucR C-terminal helix-turn-helix domain superfamily Clo1313_2554 IPR008995 Molybdate/tungstate binding, C-terminal Clo1313_2554 IPR040582 MalK, OB fold domain Clo1313_2554 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_2554 IPR005116 Transport-associated OB, type 1 Clo1313_2554 IPR003593 AAA+ ATPase domain Clo1313_2554 IPR003439 ABC transporter-like Clo1313_2554 IPR017871 ABC transporter, conserved site Clo1313_2555 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 Clo1313_2555 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site Clo1313_2555 IPR000534 Semialdehyde dehydrogenase, NAD-binding Clo1313_2555 IPR012280 Semialdehyde dehydrogenase, dimerisation domain Clo1313_2555 IPR036291 NAD(P)-binding domain superfamily Clo1313_2556 IPR001057 Glutamate/acetylglutamate kinase Clo1313_2556 IPR041727 N-Acetyl-L-glutamate kinase, cyclic Clo1313_2556 IPR036393 Acetylglutamate kinase-like superfamily Clo1313_2556 IPR001048 Aspartate/glutamate/uridylate kinase Clo1313_2556 IPR037528 Acetylglutamate kinase ArgB Clo1313_2556 IPR004662 Acetylglutamate kinase family Clo1313_2558 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Clo1313_2558 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Clo1313_2558 IPR004636 Acetylornithine/Succinylornithine transaminase family Clo1313_2558 IPR005814 Aminotransferase class-III Clo1313_2558 IPR015424 Pyridoxal phosphate-dependent transferase Clo1313_2559 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain Clo1313_2559 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain Clo1313_2559 IPR029062 Class I glutamine amidotransferase-like Clo1313_2559 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily Clo1313_2559 IPR006274 Carbamoyl-phosphate synthase, small subunit Clo1313_2559 IPR017926 Glutamine amidotransferase Clo1313_2560 IPR006275 Carbamoyl-phosphate synthase, large subunit Clo1313_2560 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain Clo1313_2560 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily Clo1313_2560 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain Clo1313_2560 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain Clo1313_2560 IPR011607 Methylglyoxal synthase-like domain Clo1313_2560 IPR036914 Methylglyoxal synthase-like domain superfamily Clo1313_2560 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain Clo1313_2560 IPR011761 ATP-grasp fold Clo1313_2560 IPR016185 Pre-ATP-grasp domain superfamily Clo1313_2561 IPR006130 Aspartate/ornithine carbamoyltransferase Clo1313_2561 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily Clo1313_2561 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain Clo1313_2561 IPR002292 Ornithine/putrescine carbamoyltransferase Clo1313_2561 IPR024904 Ornithine carbamoyltransferase Clo1313_2561 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding Clo1313_2564 IPR018247 EF-Hand 1, calcium-binding site Clo1313_2564 IPR001547 Glycoside hydrolase, family 5 Clo1313_2564 IPR016134 Dockerin domain Clo1313_2564 IPR036439 Dockerin domain superfamily Clo1313_2564 IPR017853 Glycoside hydrolase superfamily Clo1313_2564 IPR018087 Glycoside hydrolase, family 5, conserved site Clo1313_2564 IPR002105 Dockerin type I repeat Clo1313_2568 IPR036390 Winged helix DNA-binding domain superfamily Clo1313_2568 IPR005149 Transcription regulator PadR, N-terminal Clo1313_2568 IPR011991 ArsR-like helix-turn-helix domain Clo1313_2568 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_2569 IPR029052 Metallo-dependent phosphatase-like Clo1313_2569 IPR006311 Twin-arginine translocation pathway, signal sequence Clo1313_2569 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type Clo1313_2572 IPR003709 Peptidase M15B Clo1313_2572 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Clo1313_2574 IPR001207 Transposase, mutator type Clo1313_2576 IPR025303 Deacetylase PdaC Clo1313_2576 IPR002509 NodB homology domain Clo1313_2576 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel Clo1313_2576 IPR021729 Domain of unknown function DUF3298 Clo1313_2576 IPR037126 PdaC/RsiV-like superfamily Clo1313_2576 IPR017219 Peptidoglycan GlcNAc deacetylase Clo1313_2577 IPR025110 AMP-binding enzyme, C-terminal domain Clo1313_2577 IPR010060 Non-ribosomal peptide synthase Clo1313_2577 IPR001242 Condensation domain Clo1313_2577 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Clo1313_2577 IPR010071 Amino acid adenylation domain Clo1313_2577 IPR000873 AMP-dependent synthetase/ligase Clo1313_2577 IPR020845 AMP-binding, conserved site Clo1313_2577 IPR036736 ACP-like superfamily Clo1313_2577 IPR042099 AMP-dependent synthetase-like superfamily Clo1313_2577 IPR020806 Polyketide synthase, phosphopantetheine-binding domain Clo1313_2577 IPR006162 Phosphopantetheine attachment site Clo1313_2577 IPR009081 Phosphopantetheine binding ACP domain Clo1313_2580 IPR006162 Phosphopantetheine attachment site Clo1313_2580 IPR013968 Polyketide synthase, ketoreductase domain Clo1313_2580 IPR042104 Polyketide synthase, dehydratase domain superfamily Clo1313_2580 IPR020807 Polyketide synthase, dehydratase domain Clo1313_2580 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Clo1313_2580 IPR032821 Ketoacyl-synthetase, C-terminal extension Clo1313_2580 IPR036291 NAD(P)-binding domain superfamily Clo1313_2580 IPR014030 Beta-ketoacyl synthase, N-terminal Clo1313_2580 IPR014031 Beta-ketoacyl synthase, C-terminal Clo1313_2580 IPR016039 Thiolase-like Clo1313_2580 IPR020806 Polyketide synthase, phosphopantetheine-binding domain Clo1313_2580 IPR010071 Amino acid adenylation domain Clo1313_2580 IPR036736 ACP-like superfamily Clo1313_2580 IPR025110 AMP-binding enzyme, C-terminal domain Clo1313_2580 IPR001242 Condensation domain Clo1313_2580 IPR020845 AMP-binding, conserved site Clo1313_2580 IPR000873 AMP-dependent synthetase/ligase Clo1313_2580 IPR009081 Phosphopantetheine binding ACP domain Clo1313_2580 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Clo1313_2580 IPR042099 AMP-dependent synthetase-like superfamily Clo1313_2580 IPR018201 Beta-ketoacyl synthase, active site Clo1313_2585 IPR002686 Transposase IS200-like Clo1313_2585 IPR036515 Transposase IS200-like superfamily Clo1313_2589 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Clo1313_2589 IPR003594 Histidine kinase/HSP90-like ATPase Clo1313_2589 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clo1313_2589 IPR013767 PAS fold Clo1313_2589 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Clo1313_2589 IPR000014 PAS domain Clo1313_2589 IPR035965 PAS domain superfamily Clo1313_2589 IPR031967 PhoR, single Cache-like domain Clo1313_2589 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Clo1313_2589 IPR005467 Histidine kinase domain Clo1313_2590 IPR001789 Signal transduction response regulator, receiver domain Clo1313_2590 IPR016032 Signal transduction response regulator, C-terminal effector Clo1313_2590 IPR001867 OmpR/PhoB-type DNA-binding domain Clo1313_2590 IPR011006 CheY-like superfamily Clo1313_2590 IPR039420 Transcriptional regulatory protein WalR-like Clo1313_2590 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_2591 IPR001757 P-type ATPase Clo1313_2591 IPR005782 P-type ATPase, subfamily IIA, SERCA-type Clo1313_2591 IPR023214 HAD superfamily Clo1313_2591 IPR036412 HAD-like superfamily Clo1313_2591 IPR023298 P-type ATPase, transmembrane domain superfamily Clo1313_2591 IPR018303 P-type ATPase, phosphorylation site Clo1313_2591 IPR008250 P-type ATPase, A domain superfamily Clo1313_2591 IPR004014 Cation-transporting P-type ATPase, N-terminal Clo1313_2591 IPR006068 Cation-transporting P-type ATPase, C-terminal Clo1313_2591 IPR023299 P-type ATPase, cytoplasmic domain N Clo1313_2592 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Clo1313_2592 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily Clo1313_2592 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal Clo1313_2592 IPR000310 Orn/Lys/Arg decarboxylase, major domain Clo1313_2592 IPR015424 Pyridoxal phosphate-dependent transferase Clo1313_2592 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Clo1313_2593 IPR003416 MgtC/SapB/SrpB/YhiD family Clo1313_2594 IPR014202 Sporulation stage II, protein R Clo1313_2595 IPR036390 Winged helix DNA-binding domain superfamily Clo1313_2595 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_2595 IPR005149 Transcription regulator PadR, N-terminal Clo1313_2595 IPR011991 ArsR-like helix-turn-helix domain Clo1313_2597 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_2597 IPR033828 CTP synthase GATase domain Clo1313_2597 IPR017926 Glutamine amidotransferase Clo1313_2597 IPR017456 CTP synthase, N-terminal Clo1313_2597 IPR029062 Class I glutamine amidotransferase-like Clo1313_2597 IPR004468 CTP synthase Clo1313_2601 IPR004447 C-terminal-processing peptidase S41A Clo1313_2601 IPR036365 PGBD-like superfamily Clo1313_2601 IPR001478 PDZ domain Clo1313_2601 IPR041489 PDZ domain 6 Clo1313_2601 IPR036366 PGBD superfamily Clo1313_2601 IPR029045 ClpP/crotonase-like domain superfamily Clo1313_2601 IPR005151 Tail specific protease Clo1313_2601 IPR002477 Peptidoglycan binding-like Clo1313_2601 IPR036034 PDZ superfamily Clo1313_2602 IPR001119 S-layer homology domain Clo1313_2602 IPR017853 Glycoside hydrolase superfamily Clo1313_2602 IPR018087 Glycoside hydrolase, family 5, conserved site Clo1313_2602 IPR008979 Galactose-binding-like domain superfamily Clo1313_2602 IPR005086 Carbohydrate binding module family 17/28 Clo1313_2602 IPR001547 Glycoside hydrolase, family 5 Clo1313_2604 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Clo1313_2604 IPR001279 Metallo-beta-lactamase Clo1313_2604 IPR022877 Protein of unknown funcion UPF0173 Clo1313_2606 IPR005148 Arginyl tRNA synthetase N-terminal domain Clo1313_2606 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily Clo1313_2606 IPR035684 Arginyl-tRNA synthetase, catalytic core domain Clo1313_2606 IPR008909 DALR anticodon binding Clo1313_2606 IPR001278 Arginine-tRNA ligase Clo1313_2606 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clo1313_2606 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site Clo1313_2606 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding Clo1313_2608 IPR001920 Asp/Glu racemase Clo1313_2608 IPR018187 Asp/Glu racemase, active site 1 Clo1313_2608 IPR015942 Asp/Glu/hydantoin racemase Clo1313_2608 IPR033134 Asp/Glu racemase, active site 2 Clo1313_2608 IPR004391 Glutamate racemase Clo1313_2609 IPR005905 D-alanine--D-alanine ligase Clo1313_2609 IPR011095 D-alanine--D-alanine ligase, C-terminal Clo1313_2609 IPR011127 D-alanine--D-alanine ligase, N-terminal domain Clo1313_2609 IPR016185 Pre-ATP-grasp domain superfamily Clo1313_2609 IPR013815 ATP-grasp fold, subdomain 1 Clo1313_2609 IPR011761 ATP-grasp fold Clo1313_2609 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site Clo1313_2610 IPR006668 Magnesium transporter, MgtE intracellular domain Clo1313_2610 IPR038048 Magnesium transporter MgtE, transmembrane domain Clo1313_2610 IPR006669 Magnesium transporter MgtE Clo1313_2610 IPR006667 SLC41 divalent cation transporters, integral membrane domain Clo1313_2610 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily Clo1313_2610 IPR000644 CBS domain Clo1313_2610 IPR038076 MgtE, N-terminal domain superfamily Clo1313_2615 IPR013785 Aldolase-type TIM barrel Clo1313_2615 IPR011343 Deoxyribose-phosphate aldolase Clo1313_2615 IPR028581 Deoxyribose-phosphate aldolase type I Clo1313_2615 IPR002915 DeoC/FbaB/ lacD aldolase Clo1313_2616 IPR007405 Bacteriophage KVP40, Orf299 Clo1313_2617 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site Clo1313_2617 IPR005982 Thioredoxin reductase Clo1313_2617 IPR023753 FAD/NAD(P)-binding domain Clo1313_2617 IPR036188 FAD/NAD(P)-binding domain superfamily Clo1313_2618 IPR023753 FAD/NAD(P)-binding domain Clo1313_2618 IPR036188 FAD/NAD(P)-binding domain superfamily Clo1313_2618 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site Clo1313_2618 IPR005982 Thioredoxin reductase Clo1313_2619 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant Clo1313_2619 IPR023555 Thiol-disulphide oxidoreductase ResA Clo1313_2619 IPR013766 Thioredoxin domain Clo1313_2619 IPR036249 Thioredoxin-like superfamily Clo1313_2620 IPR003834 Cytochrome C biogenesis protein, transmembrane domain Clo1313_2624 IPR014224 Spore cortex-lytic enzyme SleB Clo1313_2624 IPR042047 Cell wall hydrolase SleB, domain 1 Clo1313_2624 IPR036365 PGBD-like superfamily Clo1313_2624 IPR002477 Peptidoglycan binding-like Clo1313_2624 IPR036366 PGBD superfamily Clo1313_2624 IPR011105 Cell wall hydrolase, SleB Clo1313_2626 IPR018974 Tex-like protein, N-terminal Clo1313_2626 IPR023319 Tex-like protein, HTH domain superfamily Clo1313_2626 IPR032639 Tex protein, YqgF-like domain Clo1313_2626 IPR006641 YqgF/RNase H-like domain Clo1313_2626 IPR037027 YqgF/RNase H-like domain superfamily Clo1313_2626 IPR010994 RuvA domain 2-like Clo1313_2626 IPR022967 RNA-binding domain, S1 Clo1313_2626 IPR012337 Ribonuclease H-like superfamily Clo1313_2626 IPR012340 Nucleic acid-binding, OB-fold Clo1313_2626 IPR023323 Tex-like domain superfamily Clo1313_2626 IPR003029 S1 domain Clo1313_2626 IPR041692 HHH domain 9 Clo1313_2627 IPR017583 Tagatose/fructose phosphokinase Clo1313_2627 IPR029056 Ribokinase-like Clo1313_2627 IPR011611 Carbohydrate kinase PfkB Clo1313_2627 IPR005926 Tagatose-6-phosphate kinase Clo1313_2627 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site Clo1313_2630 IPR004601 UV-endonuclease UvdE Clo1313_2630 IPR036237 Xylose isomerase-like superfamily Clo1313_2630 IPR023520 UV-endonuclease UvdE, bacterial Clo1313_2631 IPR041698 Methyltransferase domain 25 Clo1313_2631 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clo1313_2633 IPR029044 Nucleotide-diphospho-sugar transferases Clo1313_2633 IPR005835 Nucleotidyl transferase domain Clo1313_2633 IPR037538 UTP--glucose-1-phosphate uridylyltransferase, cyanobacteria Clo1313_2634 IPR020103 Pseudouridine synthase, catalytic domain superfamily Clo1313_2634 IPR006225 Pseudouridine synthase, RluC/RluD Clo1313_2634 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site Clo1313_2634 IPR006145 Pseudouridine synthase, RsuA/RluA Clo1313_2635 IPR006584 Cellulose binding, type IV Clo1313_2635 IPR000801 Putative esterase Clo1313_2635 IPR001000 Glycoside hydrolase family 10 domain Clo1313_2635 IPR031158 Glycosyl hydrolases family 10, active site Clo1313_2635 IPR017853 Glycoside hydrolase superfamily Clo1313_2635 IPR008979 Galactose-binding-like domain superfamily Clo1313_2635 IPR018247 EF-Hand 1, calcium-binding site Clo1313_2635 IPR029058 Alpha/Beta hydrolase fold Clo1313_2635 IPR036439 Dockerin domain superfamily Clo1313_2635 IPR016134 Dockerin domain Clo1313_2635 IPR002105 Dockerin type I repeat Clo1313_2635 IPR005084 Carbohydrate binding module family 6 Clo1313_2637 IPR023753 FAD/NAD(P)-binding domain Clo1313_2637 IPR012081 Alkyl hydroperoxide reductase subunit F Clo1313_2637 IPR002109 Glutaredoxin Clo1313_2637 IPR012336 Thioredoxin-like fold Clo1313_2637 IPR036249 Thioredoxin-like superfamily Clo1313_2637 IPR036188 FAD/NAD(P)-binding domain superfamily Clo1313_2637 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site Clo1313_2638 IPR036249 Thioredoxin-like superfamily Clo1313_2638 IPR013766 Thioredoxin domain Clo1313_2638 IPR019479 Peroxiredoxin, C-terminal Clo1313_2638 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant Clo1313_2638 IPR017559 Alkyl hydroperoxide reductase subunit C Clo1313_2638 IPR024706 Peroxiredoxin, AhpC-type Clo1313_2641 IPR013317 Chromosomal replication initiator protein DnaA Clo1313_2641 IPR024633 DnaA N-terminal domain Clo1313_2641 IPR010921 Trp repressor/replication initiator Clo1313_2641 IPR013159 Chromosomal replication initiator, DnaA C-terminal Clo1313_2641 IPR018312 Chromosomal replication control, initiator DnaA, conserved site Clo1313_2641 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_2641 IPR001957 Chromosomal replication control, initiator DnaA Clo1313_2641 IPR003593 AAA+ ATPase domain Clo1313_2641 IPR020591 Chromosomal replication control, initiator DnaA-like Clo1313_2641 IPR038454 DnaA, N-terminal domain superfamily Clo1313_2642 IPR008984 SMAD/FHA domain superfamily Clo1313_2642 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_2642 IPR002543 FtsK domain Clo1313_2642 IPR022206 Firmicutes EssC, N-terminal Clo1313_2642 IPR023839 Firmicutes EssC, C-terminal Clo1313_2686 IPR002686 Transposase IS200-like Clo1313_2686 IPR036515 Transposase IS200-like superfamily Clo1313_2689 IPR011990 Tetratricopeptide-like helical domain superfamily Clo1313_2689 IPR000719 Protein kinase domain Clo1313_2689 IPR023507 Serine/threonine protein kinase PknD Clo1313_2689 IPR011009 Protein kinase-like domain superfamily Clo1313_2689 IPR017441 Protein kinase, ATP binding site Clo1313_2689 IPR008271 Serine/threonine-protein kinase, active site Clo1313_2694 IPR034739 UvrD/AddA helicase, N-terminal Clo1313_2694 IPR011335 Restriction endonuclease type II-like Clo1313_2694 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type Clo1313_2694 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_2694 IPR014016 UvrD-like helicase, ATP-binding domain Clo1313_2694 IPR000212 DNA helicase, UvrD/REP type Clo1313_2694 IPR014017 UvrD-like DNA helicase, C-terminal Clo1313_2694 IPR014152 DNA helicase subunit AddA Clo1313_2694 IPR011604 Exonuclease, phage-type/RecB, C-terminal Clo1313_2695 IPR014016 UvrD-like helicase, ATP-binding domain Clo1313_2695 IPR014140 DNA helicase subunit AddB Clo1313_2695 IPR014017 UvrD-like DNA helicase, C-terminal Clo1313_2695 IPR000212 DNA helicase, UvrD/REP type Clo1313_2695 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_2695 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type Clo1313_2695 IPR011335 Restriction endonuclease type II-like Clo1313_2708 IPR005537 CRISPR type III-associated protein Clo1313_2708 IPR010173 CRISPR-associated protein Csm5 Clo1313_2715 IPR002589 Macro domain Clo1313_2716 IPR014284 RNA polymerase sigma-70 like domain Clo1313_2716 IPR014218 RNA polymerase sigma-H type Clo1313_2716 IPR016371 RNA polymerase sigma-H factor Clo1313_2716 IPR000943 RNA polymerase sigma-70 Clo1313_2716 IPR007627 RNA polymerase sigma-70 region 2 Clo1313_2716 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 Clo1313_2716 IPR013325 RNA polymerase sigma factor, region 2 Clo1313_2716 IPR013324 RNA polymerase sigma factor, region 3/4-like Clo1313_2716 IPR000792 Transcription regulator LuxR, C-terminal Clo1313_2718 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Clo1313_2718 IPR013123 RNA 2-O ribose methyltransferase, substrate binding Clo1313_2718 IPR001537 tRNA/rRNA methyltransferase, SpoU type Clo1313_2718 IPR029028 Alpha/beta knot methyltransferases Clo1313_2718 IPR029064 50S ribosomal protein L30e-like Clo1313_2718 IPR004441 RNA methyltransferase TrmH family Clo1313_2719 IPR008226 Mini-ribonuclease 3 family Clo1313_2719 IPR000999 Ribonuclease III domain Clo1313_2719 IPR036389 Ribonuclease III, endonuclease domain superfamily Clo1313_2720 IPR004995 Bacillus/Clostridium Ger spore germination protein Clo1313_2722 IPR038501 Spore germination GerAC superfamily Clo1313_2722 IPR008844 Spore germination GerAC Clo1313_2723 IPR015803 Cysteine-tRNA ligase Clo1313_2723 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR Clo1313_2723 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase Clo1313_2723 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clo1313_2723 IPR032678 tRNA synthetases class I, catalytic domain Clo1313_2723 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding Clo1313_2724 IPR001451 Hexapeptide repeat Clo1313_2724 IPR018357 Hexapeptide transferase, conserved site Clo1313_2724 IPR010493 Serine acetyltransferase, N-terminal Clo1313_2724 IPR042122 Serine acetyltransferase, N-terminal domain superfamily Clo1313_2724 IPR005881 Serine O-acetyltransferase Clo1313_2724 IPR011004 Trimeric LpxA-like superfamily Clo1313_2731 IPR011650 Peptidase M20, dimerisation domain Clo1313_2731 IPR002933 Peptidase M20 Clo1313_2731 IPR017439 Amidohydrolase Clo1313_2731 IPR036264 Bacterial exopeptidase dimerisation domain Clo1313_2732 IPR007211 Protein of unknown function DUF378 Clo1313_2734 IPR017856 Integrase-like, N-terminal Clo1313_2734 IPR002876 Transcriptional regulator TACO1-like Clo1313_2734 IPR026564 Transcriptional regulator TACO1-like, domain 3 Clo1313_2734 IPR029072 YebC-like Clo1313_2735 IPR013767 PAS fold Clo1313_2735 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clo1313_2735 IPR005467 Histidine kinase domain Clo1313_2735 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Clo1313_2735 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Clo1313_2735 IPR041328 ResE, histidine kinase sensor domain Clo1313_2735 IPR000014 PAS domain Clo1313_2735 IPR035965 PAS domain superfamily Clo1313_2735 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Clo1313_2735 IPR003594 Histidine kinase/HSP90-like ATPase Clo1313_2735 IPR003660 HAMP domain Clo1313_2737 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site Clo1313_2737 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal Clo1313_2737 IPR020568 Ribosomal protein S5 domain 2-type fold Clo1313_2737 IPR036956 Impact, N-terminal domain superfamily Clo1313_2737 IPR001498 Impact, N-terminal Clo1313_2737 IPR015796 Impact family, bacterial/archaeal Clo1313_2737 IPR023582 Impact family Clo1313_2737 IPR035647 EF-G domain III/V-like Clo1313_2738 IPR019758 Peptidase S26A, signal peptidase I, conserved site Clo1313_2738 IPR036286 LexA/Signal peptidase-like superfamily Clo1313_2738 IPR000223 Peptidase S26A, signal peptidase I Clo1313_2738 IPR019756 Peptidase S26A, signal peptidase I, serine active site Clo1313_2738 IPR019533 Peptidase S26 Clo1313_2738 IPR019757 Peptidase S26A, signal peptidase I, lysine active site Clo1313_2739 IPR000086 NUDIX hydrolase domain Clo1313_2739 IPR022927 RNA pyrophosphohydrolase RppH Clo1313_2739 IPR020476 NUDIX hydrolase Clo1313_2739 IPR015797 NUDIX hydrolase-like domain superfamily Clo1313_2739 IPR020084 NUDIX hydrolase, conserved site Clo1313_2740 IPR042108 GTPase HflX, N-terminal domain superfamily Clo1313_2740 IPR030394 HflX-type guanine nucleotide-binding (G) domain Clo1313_2740 IPR032305 GTP-binding protein, middle domain Clo1313_2740 IPR016496 GTPase HflX Clo1313_2740 IPR006073 GTP binding domain Clo1313_2740 IPR025121 GTPase HflX, N-terminal Clo1313_2740 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_2742 IPR022880 DNA polymerase IV Clo1313_2742 IPR017961 DNA polymerase, Y-family, little finger domain Clo1313_2742 IPR036775 DNA polymerase, Y-family, little finger domain superfamily Clo1313_2742 IPR001126 UmuC domain Clo1313_2743 IPR029054 dUTPase-like Clo1313_2743 IPR036157 dUTPase-like superfamily Clo1313_2743 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase Clo1313_2743 IPR033704 dUTPase, trimeric Clo1313_2744 IPR001539 Peptidase U32 Clo1313_2744 IPR032525 Peptidase family U32, C-terminal Clo1313_2745 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily Clo1313_2745 IPR006124 Metalloenzyme Clo1313_2745 IPR011258 BPG-independent PGAM, N-terminal Clo1313_2745 IPR017850 Alkaline-phosphatase-like, core domain superfamily Clo1313_2745 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent Clo1313_2747 IPR012341 Six-hairpin glycosidase-like superfamily Clo1313_2747 IPR000556 Glycoside hydrolase, 48F Clo1313_2747 IPR027390 Endoglucanase F, domain 3 Clo1313_2747 IPR023309 Endoglucanase F, domain 2 Clo1313_2747 IPR036439 Dockerin domain superfamily Clo1313_2747 IPR002105 Dockerin type I repeat Clo1313_2747 IPR008928 Six-hairpin glycosidase superfamily Clo1313_2747 IPR016134 Dockerin domain Clo1313_2750 IPR023165 rRNA adenine dimethylase-like Clo1313_2750 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site Clo1313_2750 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal Clo1313_2750 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clo1313_2750 IPR011530 Ribosomal RNA adenine dimethylase Clo1313_2750 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm Clo1313_2751 IPR010611 3D domain Clo1313_2751 IPR036908 RlpA-like domain superfamily Clo1313_2751 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 Clo1313_2751 IPR011098 G5 domain Clo1313_2753 IPR001130 TatD family Clo1313_2753 IPR032466 Metal-dependent hydrolase Clo1313_2753 IPR015991 Uncharacterised hydrolase TatD-type Clo1313_2753 IPR018228 Deoxyribonuclease, TatD-related, conserved site Clo1313_2754 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain Clo1313_2754 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding Clo1313_2754 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding Clo1313_2754 IPR012340 Nucleic acid-binding, OB-fold Clo1313_2754 IPR033911 Methioninyl-tRNA synthetase core domain Clo1313_2754 IPR015413 Methionyl/Leucyl tRNA synthetase Clo1313_2754 IPR023457 Methionine-tRNA synthetase, type 2 Clo1313_2754 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site Clo1313_2754 IPR014758 Methionyl-tRNA synthetase Clo1313_2754 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal Clo1313_2754 IPR002547 tRNA-binding domain Clo1313_2754 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clo1313_2755 IPR019712 Tetraprenyl-beta-curcumene synthase YtpB-like Clo1313_2756 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Clo1313_2757 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Clo1313_2758 IPR040678 AbrB, C-terminal Clo1313_2758 IPR007159 SpoVT-AbrB domain Clo1313_2758 IPR037914 SpoVT-AbrB domain superfamily Clo1313_2759 IPR035996 Tetrapyrrole methylase superfamily Clo1313_2759 IPR000878 Tetrapyrrole methylase Clo1313_2759 IPR014777 Tetrapyrrole methylase, subdomain 1 Clo1313_2759 IPR018063 SAM-dependent methyltransferase RsmI, conserved site Clo1313_2759 IPR008189 rRNA small subunit methyltransferase I Clo1313_2759 IPR014776 Tetrapyrrole methylase, subdomain 2 Clo1313_2760 IPR007848 Methyltransferase small domain Clo1313_2760 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clo1313_2761 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clo1313_2761 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clo1313_2762 IPR007557 PSP1, C-terminal Clo1313_2763 IPR022754 DNA polymerase III, gamma subunit, domain III Clo1313_2763 IPR012763 DNA polymerase III, subunit gamma/ tau Clo1313_2763 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal Clo1313_2763 IPR001270 ClpA/B family Clo1313_2763 IPR003593 AAA+ ATPase domain Clo1313_2763 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_2764 IPR024042 TM1646-like domain superfamily Clo1313_2764 IPR005585 Protein of unknown function DUF327 Clo1313_2766 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Clo1313_2766 IPR015424 Pyridoxal phosphate-dependent transferase Clo1313_2766 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily Clo1313_2766 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal Clo1313_2766 IPR000310 Orn/Lys/Arg decarboxylase, major domain Clo1313_2766 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Clo1313_2769 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_2769 IPR003439 ABC transporter-like Clo1313_2769 IPR003593 AAA+ ATPase domain Clo1313_2771 IPR016032 Signal transduction response regulator, C-terminal effector Clo1313_2771 IPR001789 Signal transduction response regulator, receiver domain Clo1313_2771 IPR039420 Transcriptional regulatory protein WalR-like Clo1313_2771 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_2771 IPR011006 CheY-like superfamily Clo1313_2771 IPR001867 OmpR/PhoB-type DNA-binding domain Clo1313_2772 IPR003594 Histidine kinase/HSP90-like ATPase Clo1313_2772 IPR005467 Histidine kinase domain Clo1313_2772 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Clo1313_2772 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clo1313_2773 IPR002767 Thiamine-binding protein Clo1313_2773 IPR029756 MTH1187/YkoF-like Clo1313_2774 IPR035906 MetI-like superfamily Clo1313_2774 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Clo1313_2775 IPR027939 NMT1/THI5 family Clo1313_2775 IPR015168 SsuA/THI5-like Clo1313_2776 IPR003439 ABC transporter-like Clo1313_2776 IPR017871 ABC transporter, conserved site Clo1313_2776 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_2776 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB Clo1313_2776 IPR003593 AAA+ ATPase domain Clo1313_2777 IPR017853 Glycoside hydrolase superfamily Clo1313_2777 IPR001000 Glycoside hydrolase family 10 domain Clo1313_2777 IPR024449 Anti-sigma factor RsgI, N-terminal Clo1313_2778 IPR014244 RNA polymerase sigma-I type Clo1313_2778 IPR018247 EF-Hand 1, calcium-binding site Clo1313_2778 IPR007627 RNA polymerase sigma-70 region 2 Clo1313_2778 IPR013325 RNA polymerase sigma factor, region 2 Clo1313_2778 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_2783 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Clo1313_2783 IPR035906 MetI-like superfamily Clo1313_2784 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Clo1313_2784 IPR035906 MetI-like superfamily Clo1313_2785 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_2785 IPR011703 ATPase, AAA-3 Clo1313_2785 IPR041628 ChlI/MoxR, AAA lid domain Clo1313_2793 IPR018247 EF-Hand 1, calcium-binding site Clo1313_2793 IPR029058 Alpha/Beta hydrolase fold Clo1313_2793 IPR000801 Putative esterase Clo1313_2793 IPR008979 Galactose-binding-like domain superfamily Clo1313_2793 IPR001000 Glycoside hydrolase family 10 domain Clo1313_2793 IPR031158 Glycosyl hydrolases family 10, active site Clo1313_2793 IPR036439 Dockerin domain superfamily Clo1313_2793 IPR017853 Glycoside hydrolase superfamily Clo1313_2793 IPR003305 Carbohydrate-binding, CenC-like Clo1313_2793 IPR002105 Dockerin type I repeat Clo1313_2793 IPR016134 Dockerin domain Clo1313_2794 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Clo1313_2794 IPR006710 Glycoside hydrolase, family 43 Clo1313_2794 IPR007934 Alpha-L-arabinofuranosidase B, arabinose-binding domain Clo1313_2794 IPR036195 Alpha-L-arabinofuranosidase B, arabinose-binding domain superfamily Clo1313_2795 IPR006710 Glycoside hydrolase, family 43 Clo1313_2795 IPR036195 Alpha-L-arabinofuranosidase B, arabinose-binding domain superfamily Clo1313_2795 IPR007934 Alpha-L-arabinofuranosidase B, arabinose-binding domain Clo1313_2795 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Clo1313_2798 IPR003607 HD/PDEase domain Clo1313_2798 IPR006674 HD domain Clo1313_2798 IPR026875 Phosphohydrolase-associated domain Clo1313_2798 IPR023023 dNTP triphosphohydrolase, type 2 Clo1313_2798 IPR006261 dNTP triphosphohydrolase Clo1313_2800 IPR034137 RecR, TOPRIM domain Clo1313_2800 IPR015967 Recombination protein RecR, conserved site Clo1313_2800 IPR006171 TOPRIM domain Clo1313_2800 IPR023627 Recombination protein RecR Clo1313_2800 IPR000093 DNA recombination protein RecR Clo1313_2800 IPR023628 Recombination protein RecR, C4-type zinc finger Clo1313_2801 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily Clo1313_2801 IPR004401 Nucleoid-associated protein YbaB/EbfC family Clo1313_2802 IPR022754 DNA polymerase III, gamma subunit, domain III Clo1313_2802 IPR001270 ClpA/B family Clo1313_2802 IPR003593 AAA+ ATPase domain Clo1313_2802 IPR012763 DNA polymerase III, subunit gamma/ tau Clo1313_2802 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_2802 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal Clo1313_2805 IPR018087 Glycoside hydrolase, family 5, conserved site Clo1313_2805 IPR036966 Carbohydrate-binding module 3 superfamily Clo1313_2805 IPR017853 Glycoside hydrolase superfamily Clo1313_2805 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clo1313_2805 IPR001956 Carbohydrate-binding module 3 Clo1313_2805 IPR001000 Glycoside hydrolase family 10 domain Clo1313_2805 IPR031158 Glycosyl hydrolases family 10, active site Clo1313_2805 IPR001547 Glycoside hydrolase, family 5 Clo1313_2812 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clo1313_2812 IPR002102 Cellulosome anchoring protein, cohesin domain Clo1313_2812 IPR001119 S-layer homology domain Clo1313_2815 IPR025584 Carbohydrate-binding domain-containing protein Cthe_2159 Clo1313_2820 IPR011697 Peptidase C26 Clo1313_2820 IPR017926 Glutamine amidotransferase Clo1313_2820 IPR029062 Class I glutamine amidotransferase-like Clo1313_2821 IPR002645 STAS domain Clo1313_2821 IPR014237 Anti-sigma F factor antagonist Clo1313_2821 IPR003658 Anti-sigma factor antagonist Clo1313_2821 IPR036513 STAS domain superfamily Clo1313_2823 IPR018527 Rubredoxin, iron-binding site Clo1313_2823 IPR024934 Rubredoxin-like domain Clo1313_2823 IPR024922 Rubredoxin Clo1313_2823 IPR024935 Rubredoxin domain Clo1313_2824 IPR009665 Protein of unknown function DUF1256 Clo1313_2824 IPR023430 Peptidase HybD-like domain superfamily Clo1313_2828 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type Clo1313_2828 IPR029052 Metallo-dependent phosphatase-like Clo1313_2831 IPR034704 L28p-like Clo1313_2831 IPR002150 Ribosomal protein L31 Clo1313_2831 IPR027491 Ribosomal protein L31 type A Clo1313_2831 IPR042105 Ribosomal protein L31 superfamily Clo1313_2832 IPR041703 Transcription termination factor Rho, ATP binding domain Clo1313_2832 IPR011112 Rho termination factor, N-terminal Clo1313_2832 IPR036269 Rho termination factor, N-terminal domain superfamily Clo1313_2832 IPR011113 Rho termination factor, RNA-binding domain Clo1313_2832 IPR004665 Transcription termination factor Rho Clo1313_2832 IPR012340 Nucleic acid-binding, OB-fold Clo1313_2832 IPR011129 Cold shock domain Clo1313_2832 IPR003593 AAA+ ATPase domain Clo1313_2832 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_2832 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain Clo1313_2835 IPR003675 CAAX prenyl protease 2 Clo1313_2843 IPR002022 Pectate lyase Clo1313_2843 IPR011050 Pectin lyase fold/virulence factor Clo1313_2843 IPR012334 Pectin lyase fold Clo1313_2844 IPR014743 Chloride channel, core Clo1313_2844 IPR001807 Chloride channel, voltage gated Clo1313_2845 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase Clo1313_2845 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Clo1313_2845 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clo1313_2845 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type Clo1313_2847 IPR029044 Nucleotide-diphospho-sugar transferases Clo1313_2847 IPR005835 Nucleotidyl transferase domain Clo1313_2847 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type Clo1313_2848 IPR017039 Virulence factor BrkB Clo1313_2849 IPR018275 Ribosomal protein S18, conserved site Clo1313_2849 IPR001648 Ribosomal protein S18 Clo1313_2849 IPR036870 Ribosomal protein S18 superfamily Clo1313_2850 IPR012340 Nucleic acid-binding, OB-fold Clo1313_2850 IPR000424 Primosome PriB/single-strand DNA-binding Clo1313_2850 IPR011344 Single-stranded DNA-binding protein Clo1313_2851 IPR035980 Ribosomal protein S6 superfamily Clo1313_2851 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 Clo1313_2851 IPR020814 Ribosomal protein S6, plastid/chloroplast Clo1313_2851 IPR000529 Ribosomal protein S6 Clo1313_2852 IPR011006 CheY-like superfamily Clo1313_2852 IPR029787 Nucleotide cyclase Clo1313_2852 IPR001789 Signal transduction response regulator, receiver domain Clo1313_2852 IPR000160 GGDEF domain Clo1313_2853 IPR006680 Amidohydrolase-related Clo1313_2853 IPR003764 N-acetylglucosamine-6-phosphate deacetylase Clo1313_2853 IPR032466 Metal-dependent hydrolase Clo1313_2853 IPR011059 Metal-dependent hydrolase, composite domain superfamily Clo1313_2854 IPR037439 1,4-alpha-glucan-branching enzyme Clo1313_2854 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB Clo1313_2854 IPR006047 Glycosyl hydrolase, family 13, catalytic domain Clo1313_2854 IPR004193 Glycoside hydrolase, family 13, N-terminal Clo1313_2854 IPR013780 Glycosyl hydrolase, all-beta Clo1313_2854 IPR017853 Glycoside hydrolase superfamily Clo1313_2854 IPR013783 Immunoglobulin-like fold Clo1313_2854 IPR014756 Immunoglobulin E-set Clo1313_2854 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta Clo1313_2856 IPR005084 Carbohydrate binding module family 6 Clo1313_2856 IPR002105 Dockerin type I repeat Clo1313_2856 IPR016134 Dockerin domain Clo1313_2856 IPR036439 Dockerin domain superfamily Clo1313_2856 IPR017853 Glycoside hydrolase superfamily Clo1313_2856 IPR000801 Putative esterase Clo1313_2856 IPR008979 Galactose-binding-like domain superfamily Clo1313_2856 IPR001000 Glycoside hydrolase family 10 domain Clo1313_2856 IPR006584 Cellulose binding, type IV Clo1313_2856 IPR018247 EF-Hand 1, calcium-binding site Clo1313_2856 IPR029058 Alpha/Beta hydrolase fold Clo1313_2856 IPR031158 Glycosyl hydrolases family 10, active site Clo1313_2857 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Clo1313_2857 IPR006710 Glycoside hydrolase, family 43 Clo1313_2857 IPR041542 Beta-xylosidase, C-terminal Concanavalin A-like domain Clo1313_2857 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Clo1313_2858 IPR000801 Putative esterase Clo1313_2858 IPR031158 Glycosyl hydrolases family 10, active site Clo1313_2858 IPR001000 Glycoside hydrolase family 10 domain Clo1313_2858 IPR008979 Galactose-binding-like domain superfamily Clo1313_2858 IPR017853 Glycoside hydrolase superfamily Clo1313_2858 IPR018247 EF-Hand 1, calcium-binding site Clo1313_2858 IPR036439 Dockerin domain superfamily Clo1313_2858 IPR016134 Dockerin domain Clo1313_2858 IPR002105 Dockerin type I repeat Clo1313_2858 IPR006584 Cellulose binding, type IV Clo1313_2858 IPR029058 Alpha/Beta hydrolase fold Clo1313_2858 IPR005084 Carbohydrate binding module family 6 Clo1313_2859 IPR031158 Glycosyl hydrolases family 10, active site Clo1313_2859 IPR029058 Alpha/Beta hydrolase fold Clo1313_2859 IPR006584 Cellulose binding, type IV Clo1313_2859 IPR005084 Carbohydrate binding module family 6 Clo1313_2859 IPR002105 Dockerin type I repeat Clo1313_2859 IPR016134 Dockerin domain Clo1313_2859 IPR036439 Dockerin domain superfamily Clo1313_2859 IPR018247 EF-Hand 1, calcium-binding site Clo1313_2859 IPR001000 Glycoside hydrolase family 10 domain Clo1313_2859 IPR017853 Glycoside hydrolase superfamily Clo1313_2859 IPR008979 Galactose-binding-like domain superfamily Clo1313_2859 IPR000801 Putative esterase Clo1313_2860 IPR006584 Cellulose binding, type IV Clo1313_2860 IPR005084 Carbohydrate binding module family 6 Clo1313_2860 IPR008979 Galactose-binding-like domain superfamily Clo1313_2860 IPR006710 Glycoside hydrolase, family 43 Clo1313_2860 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Clo1313_2861 IPR006101 Glycoside hydrolase, family 2 Clo1313_2861 IPR023232 Glycoside hydrolase, family 2, active site Clo1313_2861 IPR006103 Glycoside hydrolase family 2, catalytic domain Clo1313_2861 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich Clo1313_2861 IPR017853 Glycoside hydrolase superfamily Clo1313_2861 IPR040605 Glycoside hydrolase family 2, domain 5 Clo1313_2861 IPR006104 Glycosyl hydrolases family 2, sugar binding domain Clo1313_2861 IPR013783 Immunoglobulin-like fold Clo1313_2861 IPR008979 Galactose-binding-like domain superfamily Clo1313_2861 IPR032311 Domain of unknown function DUF4982 Clo1313_2861 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily Clo1313_2861 IPR008964 Invasin/intimin cell-adhesion fragments Clo1313_2864 IPR009061 Putative DNA-binding domain superfamily Clo1313_2864 IPR029442 GyrI-like small molecule binding domain Clo1313_2864 IPR000551 MerR-type HTH domain Clo1313_2864 IPR011256 Regulatory factor, effector binding domain superfamily Clo1313_2864 IPR010499 Bacterial transcription activator, effector binding Clo1313_2865 IPR027022 ABC transporter permease protein, BceB-type Clo1313_2865 IPR003838 ABC transporter permease protein domain Clo1313_2866 IPR003439 ABC transporter-like Clo1313_2866 IPR003593 AAA+ ATPase domain Clo1313_2866 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_2867 IPR003594 Histidine kinase/HSP90-like ATPase Clo1313_2867 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clo1313_2867 IPR005467 Histidine kinase domain Clo1313_2867 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Clo1313_2868 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_2868 IPR039420 Transcriptional regulatory protein WalR-like Clo1313_2868 IPR001789 Signal transduction response regulator, receiver domain Clo1313_2868 IPR016032 Signal transduction response regulator, C-terminal effector Clo1313_2868 IPR001867 OmpR/PhoB-type DNA-binding domain Clo1313_2868 IPR011006 CheY-like superfamily Clo1313_2876 IPR018234 GTP cyclohydrolase I, conserved site Clo1313_2876 IPR020602 GTP cyclohydrolase I domain Clo1313_2876 IPR001474 GTP cyclohydrolase I Clo1313_2877 IPR011810 Cyanophycin synthetase Clo1313_2877 IPR013221 Mur ligase, central Clo1313_2877 IPR036615 Mur ligase, C-terminal domain superfamily Clo1313_2877 IPR004101 Mur ligase, C-terminal Clo1313_2877 IPR036565 Mur-like, catalytic domain superfamily Clo1313_2877 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain Clo1313_2877 IPR013815 ATP-grasp fold, subdomain 1 Clo1313_2877 IPR011761 ATP-grasp fold Clo1313_2878 IPR005320 Peptidase S51 Clo1313_2878 IPR011811 Peptidase S51, cyanophycinase Clo1313_2878 IPR029062 Class I glutamine amidotransferase-like Clo1313_2880 IPR010229 Peptidase M38, beta-aspartyl dipeptidase Clo1313_2880 IPR032466 Metal-dependent hydrolase Clo1313_2880 IPR006680 Amidohydrolase-related Clo1313_2880 IPR033826 Isoaspartyl-dipeptidase Clo1313_2880 IPR011059 Metal-dependent hydrolase, composite domain superfamily Clo1313_2881 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_2881 IPR006197 Peptidase S24, LexA-like Clo1313_2881 IPR006199 LexA repressor, DNA-binding domain Clo1313_2881 IPR036286 LexA/Signal peptidase-like superfamily Clo1313_2881 IPR039418 LexA-like Clo1313_2881 IPR006200 Transcription regulator LexA Clo1313_2881 IPR011991 ArsR-like helix-turn-helix domain Clo1313_2881 IPR015927 Peptidase S24/S26A/S26B/S26C Clo1313_2881 IPR036390 Winged helix DNA-binding domain superfamily Clo1313_2882 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site Clo1313_2882 IPR024084 Isopropylmalate dehydrogenase-like domain Clo1313_2882 IPR004429 Isopropylmalate dehydrogenase Clo1313_2883 IPR033940 3-isopropylmalate dehydratase, swivel domain Clo1313_2883 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel Clo1313_2883 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain Clo1313_2883 IPR011824 Hydrolyase LeuD/DmdB, bacterial Clo1313_2883 IPR011827 Hydrolyase LeuD/HacB/DmdB Clo1313_2884 IPR033941 3-Isopropylmalate dehydratase, catalytic domain Clo1313_2884 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 Clo1313_2884 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain Clo1313_2884 IPR018136 Aconitase family, 4Fe-4S cluster binding site Clo1313_2884 IPR036008 Aconitase, iron-sulfur domain Clo1313_2884 IPR011826 Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic Clo1313_2884 IPR006251 Homoaconitase/3-isopropylmalate dehydratase, large subunit Clo1313_2884 IPR011823 3-isopropylmalate dehydratase, large subunit, bacteria Clo1313_2885 IPR003313 AraC-type arabinose-binding/dimerisation domain Clo1313_2885 IPR009057 Homeobox-like domain superfamily Clo1313_2885 IPR037923 Transcription regulator HTH-like Clo1313_2885 IPR018060 DNA binding HTH domain, AraC-type Clo1313_2885 IPR018062 HTH domain AraC-type, conserved site Clo1313_2886 IPR019264 Domain of unknown function DUF2179 Clo1313_2886 IPR022930 Protein of unknown function UPF0316 Clo1313_2886 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Clo1313_2890 IPR036584 Flagellar protein FliS superfamily Clo1313_2890 IPR003713 Flagellar protein FliS Clo1313_2891 IPR003481 Flagellar hook-associated protein 2, N-terminal Clo1313_2891 IPR010809 Flagellar hook-associated protein 2, C-terminal Clo1313_2891 IPR010810 Flagellin hook, IN motif Clo1313_2891 IPR040026 Flagellar hook-associated protein 2 Clo1313_2893 IPR036291 NAD(P)-binding domain superfamily Clo1313_2893 IPR016040 NAD(P)-binding domain Clo1313_2893 IPR005888 dTDP-glucose 4,6-dehydratase Clo1313_2894 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase Clo1313_2894 IPR015424 Pyridoxal phosphate-dependent transferase Clo1313_2894 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Clo1313_2894 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Clo1313_2897 IPR011034 Formyl transferase-like, C-terminal domain superfamily Clo1313_2897 IPR036477 Formyl transferase, N-terminal domain superfamily Clo1313_2897 IPR002376 Formyl transferase, N-terminal Clo1313_2897 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain Clo1313_2897 IPR005793 Formyl transferase, C-terminal Clo1313_2897 IPR005794 Methionyl-tRNA formyltransferase Clo1313_2897 IPR037022 Formyl transferase, C-terminal domain superfamily Clo1313_2900 IPR036736 ACP-like superfamily Clo1313_2900 IPR003231 Acyl carrier protein (ACP) Clo1313_2900 IPR020806 Polyketide synthase, phosphopantetheine-binding domain Clo1313_2900 IPR009081 Phosphopantetheine binding ACP domain Clo1313_2900 IPR006162 Phosphopantetheine attachment site Clo1313_2902 IPR020030 Pseudaminic acid biosynthesis, PseI Clo1313_2902 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal Clo1313_2902 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily Clo1313_2902 IPR013785 Aldolase-type TIM barrel Clo1313_2902 IPR013132 N-acetylneuraminic acid synthase, N-terminal Clo1313_2902 IPR013974 SAF domain Clo1313_2903 IPR029044 Nucleotide-diphospho-sugar transferases Clo1313_2903 IPR003329 Acylneuraminate cytidylyltransferase Clo1313_2904 IPR013216 Methyltransferase type 11 Clo1313_2904 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clo1313_2905 IPR013692 UDP-glucose 4-epimerase CapD, C-terminal domain Clo1313_2905 IPR036291 NAD(P)-binding domain superfamily Clo1313_2905 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain Clo1313_2909 IPR001492 Flagellin Clo1313_2909 IPR042187 Flagellin, C-terminal domain, subdomain 2 Clo1313_2909 IPR001029 Flagellin, D0/D1 domain Clo1313_2910 IPR001029 Flagellin, D0/D1 domain Clo1313_2910 IPR042187 Flagellin, C-terminal domain, subdomain 2 Clo1313_2910 IPR001492 Flagellin Clo1313_2911 IPR016161 Aldehyde/histidinol dehydrogenase Clo1313_2911 IPR016163 Aldehyde dehydrogenase, C-terminal Clo1313_2911 IPR016160 Aldehyde dehydrogenase, cysteine active site Clo1313_2911 IPR029510 Aldehyde dehydrogenase, glutamic acid active site Clo1313_2911 IPR016162 Aldehyde dehydrogenase, N-terminal Clo1313_2911 IPR015590 Aldehyde dehydrogenase domain Clo1313_2911 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent Clo1313_2912 IPR003751 Translational regulator CsrA Clo1313_2912 IPR036107 Carbon storage regulator superfamily Clo1313_2913 IPR003775 Flagellar assembly factor FliW Clo1313_2913 IPR024046 Flagellar assembly factor FliW domain superfamily Clo1313_2915 IPR001492 Flagellin Clo1313_2915 IPR042187 Flagellin, C-terminal domain, subdomain 2 Clo1313_2915 IPR001029 Flagellin, D0/D1 domain Clo1313_2916 IPR019776 Flagellar basal body rod protein, conserved site Clo1313_2916 IPR001444 Flagellar basal body rod protein, N-terminal Clo1313_2916 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Clo1313_2916 IPR002371 Flagellar hook-associated protein 1 Clo1313_2921 IPR005222 Competence protein ComF Clo1313_2921 IPR000836 Phosphoribosyltransferase domain Clo1313_2921 IPR029057 Phosphoribosyltransferase-like Clo1313_2922 IPR006345 RecD-like DNA helicase Clo1313_2922 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_2922 IPR029493 RecD helicase-like helix-hairpin-helix domain Clo1313_2922 IPR041451 RecD-like DNA helicase, SH3 domain Clo1313_2922 IPR027785 UvrD-like helicase C-terminal domain Clo1313_2922 IPR003593 AAA+ ATPase domain Clo1313_2924 IPR022636 S-adenosylmethionine synthetase superfamily Clo1313_2924 IPR022631 S-adenosylmethionine synthetase, conserved site Clo1313_2924 IPR022628 S-adenosylmethionine synthetase, N-terminal Clo1313_2924 IPR002133 S-adenosylmethionine synthetase Clo1313_2924 IPR022630 S-adenosylmethionine synthetase, C-terminal Clo1313_2924 IPR022629 S-adenosylmethionine synthetase, central domain Clo1313_2925 IPR025540 Fluoroacetyl-CoA thioesterase Clo1313_2925 IPR029069 HotDog domain superfamily Clo1313_2926 IPR003593 AAA+ ATPase domain Clo1313_2926 IPR041569 AAA ATPase, AAA+ lid domain Clo1313_2926 IPR003959 ATPase, AAA-type, core Clo1313_2926 IPR003960 ATPase, AAA-type, conserved site Clo1313_2926 IPR005936 Peptidase, FtsH Clo1313_2926 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_2926 IPR011546 Peptidase M41, FtsH extracellular Clo1313_2926 IPR000642 Peptidase M41 Clo1313_2926 IPR037219 Peptidase M41-like Clo1313_2927 IPR000836 Phosphoribosyltransferase domain Clo1313_2927 IPR029057 Phosphoribosyltransferase-like Clo1313_2927 IPR005904 Hypoxanthine phosphoribosyl transferase Clo1313_2928 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clo1313_2928 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Clo1313_2928 IPR012094 tRNA(Ile)-lysidine synthase Clo1313_2928 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal Clo1313_2928 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal Clo1313_2929 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_2929 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal Clo1313_2929 IPR007694 DNA helicase, DnaB-like, C-terminal Clo1313_2929 IPR007692 DNA helicase, DnaB type Clo1313_2929 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily Clo1313_2929 IPR007693 DNA helicase, DnaB-like, N-terminal Clo1313_2929 IPR003593 AAA+ ATPase domain Clo1313_2930 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Clo1313_2930 IPR020070 Ribosomal protein L9, N-terminal Clo1313_2930 IPR020069 Ribosomal protein L9, C-terminal Clo1313_2930 IPR020594 Ribosomal protein L9, bacteria/chloroplast Clo1313_2930 IPR009027 Ribosomal protein L9/RNase H1, N-terminal Clo1313_2930 IPR000244 Ribosomal protein L9 Clo1313_2930 IPR036791 Ribosomal protein L9, C-terminal domain superfamily Clo1313_2931 IPR001667 DDH domain Clo1313_2931 IPR003156 DHHA1 domain Clo1313_2931 IPR014528 Cyclic-di-AMP phosphodiesterase GdpP/PdeA Clo1313_2931 IPR000160 GGDEF domain Clo1313_2931 IPR038763 DHH phosphoesterase superfamily Clo1313_2933 IPR002912 ACT domain Clo1313_2933 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase Clo1313_2933 IPR036263 Chorismate mutase type II superfamily Clo1313_2933 IPR036979 Chorismate mutase domain superfamily Clo1313_2933 IPR002701 Chorismate mutase II, prokaryotic-type Clo1313_2933 IPR018528 Prephenate dehydratase, conserved site Clo1313_2933 IPR001086 Prephenate dehydratase Clo1313_2935 IPR002490 V-type ATPase, V0 complex, 116kDa subunit family Clo1313_2936 IPR002379 V-ATPase proteolipid subunit C-like domain Clo1313_2936 IPR035921 F/V-ATP synthase subunit C superfamily Clo1313_2936 IPR000245 V-ATPase proteolipid subunit Clo1313_2937 IPR038495 V-type ATPase subunit E, C-terminal domain superfamily Clo1313_2937 IPR002842 V-type ATPase subunit E Clo1313_2939 IPR008218 ATPase, V1 complex, subunit F Clo1313_2939 IPR022944 ATPase, V1 complex, subunit F, bacterial/archaeal Clo1313_2939 IPR036906 ATPase, V1 complex, subunit F superfamily Clo1313_2940 IPR022878 V-type ATP synthase catalytic alpha chain Clo1313_2940 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_2940 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal Clo1313_2940 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain Clo1313_2940 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily Clo1313_2940 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site Clo1313_2940 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily Clo1313_2940 IPR031686 ATPsynthase alpha/beta subunit, N-terminal extension Clo1313_2940 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain Clo1313_2941 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_2941 IPR022879 V-type ATP synthase regulatory subunit B/beta Clo1313_2941 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain Clo1313_2941 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain Clo1313_2941 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site Clo1313_2942 IPR002699 ATPase, V1 complex, subunit D Clo1313_2943 IPR003593 AAA+ ATPase domain Clo1313_2943 IPR032781 ABC-transporter extension domain Clo1313_2943 IPR003439 ABC transporter-like Clo1313_2943 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_2950 IPR037219 Peptidase M41-like Clo1313_2950 IPR000642 Peptidase M41 Clo1313_2950 IPR005936 Peptidase, FtsH Clo1313_2950 IPR003960 ATPase, AAA-type, conserved site Clo1313_2950 IPR003959 ATPase, AAA-type, core Clo1313_2950 IPR041569 AAA ATPase, AAA+ lid domain Clo1313_2950 IPR003593 AAA+ ATPase domain Clo1313_2950 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_2952 IPR001320 Ionotropic glutamate receptor Clo1313_2952 IPR018313 Solute-binding protein family 3, conserved site Clo1313_2952 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Clo1313_2953 IPR035906 MetI-like superfamily Clo1313_2953 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain Clo1313_2953 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Clo1313_2954 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_2954 IPR017871 ABC transporter, conserved site Clo1313_2954 IPR003593 AAA+ ATPase domain Clo1313_2954 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type Clo1313_2954 IPR003439 ABC transporter-like Clo1313_2955 IPR001789 Signal transduction response regulator, receiver domain Clo1313_2955 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase Clo1313_2955 IPR011006 CheY-like superfamily Clo1313_2955 IPR035909 Methylesterase CheB, C-terminal Clo1313_2955 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type Clo1313_2956 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily Clo1313_2956 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal Clo1313_2956 IPR000780 MCP methyltransferase, CheR-type Clo1313_2956 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clo1313_2956 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal Clo1313_2956 IPR026024 Chemotaxis protein methyltransferase CheR Clo1313_2957 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Clo1313_2957 IPR004090 Chemotaxis methyl-accepting receptor Clo1313_2957 IPR003660 HAMP domain Clo1313_2958 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Clo1313_2958 IPR002545 CheW-like domain Clo1313_2958 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clo1313_2958 IPR005467 Histidine kinase domain Clo1313_2958 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Clo1313_2958 IPR036641 HPT domain superfamily Clo1313_2958 IPR004105 Histidine kinase CheA-like, homodimeric domain Clo1313_2958 IPR003594 Histidine kinase/HSP90-like ATPase Clo1313_2958 IPR036061 CheW-like domain superfamily Clo1313_2958 IPR010808 Chemotaxis protein CheA, P2 response regulator-binding Clo1313_2958 IPR035891 CheY-binding domain of CheA Clo1313_2958 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Clo1313_2958 IPR037052 Chemotaxis protein CheA, P2 response regulator-binding domain superfamily Clo1313_2958 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily Clo1313_2959 IPR002545 CheW-like domain Clo1313_2959 IPR036061 CheW-like domain superfamily Clo1313_2959 IPR039315 Chemotaxis protein CheW Clo1313_2961 IPR002104 Integrase, catalytic domain Clo1313_2961 IPR013762 Integrase-like, catalytic domain superfamily Clo1313_2961 IPR011010 DNA breaking-rejoining enzyme, catalytic core Clo1313_2962 IPR011256 Regulatory factor, effector binding domain superfamily Clo1313_2962 IPR018062 HTH domain AraC-type, conserved site Clo1313_2962 IPR018060 DNA binding HTH domain, AraC-type Clo1313_2962 IPR009057 Homeobox-like domain superfamily Clo1313_2962 IPR029442 GyrI-like small molecule binding domain Clo1313_2962 IPR020449 Transcription regulator HTH, AraC- type Clo1313_2962 IPR010499 Bacterial transcription activator, effector binding Clo1313_2965 IPR003439 ABC transporter-like Clo1313_2965 IPR017871 ABC transporter, conserved site Clo1313_2965 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_2965 IPR003593 AAA+ ATPase domain Clo1313_2969 IPR021127 CRISPR-associated endonuclease Cas2 Clo1313_2969 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 Clo1313_2970 IPR002729 CRISPR-associated protein Cas1 Clo1313_2970 IPR042206 CRISPR-associated endonuclease Cas1, C-terminal domain Clo1313_2970 IPR019858 CRISPR-associated protein Cas1, HMARI/TNEAP subtype Clo1313_2970 IPR042211 CRISPR-associated endonuclease Cas1, N-terminal domain Clo1313_2972 IPR035011 CRISPR-associated endonuclease/helicase Cas3 Clo1313_2972 IPR038257 CRISPR-associated Cas3-type HD domain superfamily Clo1313_2972 IPR006483 CRISPR-associated Cas3-type HD domain Clo1313_2972 IPR014001 Helicase superfamily 1/2, ATP-binding domain Clo1313_2972 IPR001650 Helicase, C-terminal Clo1313_2972 IPR041372 Cas3, C-terminal Clo1313_2972 IPR006474 Helicase Cas3, CRISPR-associated, core Clo1313_2972 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_2972 IPR011545 DEAD/DEAH box helicase domain Clo1313_2978 IPR003824 Undecaprenyl-diphosphatase UppP Clo1313_2979 IPR002528 Multi antimicrobial extrusion protein Clo1313_2982 IPR001110 Uncharacterised protein family UPF0012, conserved site Clo1313_2982 IPR003010 Carbon-nitrogen hydrolase Clo1313_2982 IPR036526 Carbon-nitrogen hydrolase superfamily Clo1313_2987 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Clo1313_2987 IPR029028 Alpha/beta knot methyltransferases Clo1313_2987 IPR003742 RNA methyltransferase RlmH Clo1313_2988 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Clo1313_2988 IPR001279 Metallo-beta-lactamase Clo1313_2989 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase Clo1313_2989 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta Clo1313_2989 IPR036968 Enolpyruvate transferase domain superfamily Clo1313_2989 IPR001986 Enolpyruvate transferase domain Clo1313_2993 IPR035965 PAS domain superfamily Clo1313_2993 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Clo1313_2993 IPR000014 PAS domain Clo1313_2993 IPR001610 PAC motif Clo1313_2993 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Clo1313_2993 IPR005467 Histidine kinase domain Clo1313_2993 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clo1313_2993 IPR003594 Histidine kinase/HSP90-like ATPase Clo1313_2993 IPR003660 HAMP domain Clo1313_2993 IPR000700 PAS-associated, C-terminal Clo1313_2993 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Clo1313_2994 IPR036388 Winged helix-like DNA-binding domain superfamily Clo1313_2994 IPR039420 Transcriptional regulatory protein WalR-like Clo1313_2994 IPR001789 Signal transduction response regulator, receiver domain Clo1313_2994 IPR016032 Signal transduction response regulator, C-terminal effector Clo1313_2994 IPR001867 OmpR/PhoB-type DNA-binding domain Clo1313_2994 IPR011006 CheY-like superfamily Clo1313_2997 IPR036291 NAD(P)-binding domain superfamily Clo1313_2997 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain Clo1313_2997 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clo1313_2998 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain Clo1313_2999 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Clo1313_2999 IPR001296 Glycosyl transferase, family 1 Clo1313_3001 IPR001296 Glycosyl transferase, family 1 Clo1313_3003 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation Clo1313_3003 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase Clo1313_3003 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal Clo1313_3003 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Clo1313_3003 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal Clo1313_3003 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily Clo1313_3003 IPR036291 NAD(P)-binding domain superfamily Clo1313_3003 IPR017476 UDP-glucose/GDP-mannose dehydrogenase Clo1313_3007 IPR003362 Bacterial sugar transferase Clo1313_3008 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Clo1313_3008 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Clo1313_3008 IPR015424 Pyridoxal phosphate-dependent transferase Clo1313_3008 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase Clo1313_3011 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clo1313_3011 IPR002102 Cellulosome anchoring protein, cohesin domain Clo1313_3011 IPR001119 S-layer homology domain Clo1313_3012 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site Clo1313_3012 IPR001448 Small acid-soluble spore protein, alpha/beta-type Clo1313_3013 IPR042047 Cell wall hydrolase SleB, domain 1 Clo1313_3013 IPR011105 Cell wall hydrolase, SleB Clo1313_3015 IPR000644 CBS domain Clo1313_3017 IPR004393 Nicotinate-nucleotide pyrophosphorylase Clo1313_3017 IPR013785 Aldolase-type TIM barrel Clo1313_3017 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal Clo1313_3017 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily Clo1313_3017 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal Clo1313_3017 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal Clo1313_3017 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Clo1313_3018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Clo1313_3018 IPR036188 FAD/NAD(P)-binding domain superfamily Clo1313_3018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily Clo1313_3018 IPR005288 L-aspartate oxidase Clo1313_3018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Clo1313_3018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal Clo1313_3019 IPR003473 Quinolinate synthetase A Clo1313_3019 IPR023066 Quinolinate synthase A, type 2 Clo1313_3019 IPR036094 Quinolinate synthetase A superfamily Clo1313_3022 IPR039356 Metal-dependent nucleoside 5'-monophosphatase Clo1313_3022 IPR022971 5'-deoxynucleotidase YfbR Clo1313_3022 IPR003607 HD/PDEase domain Clo1313_3023 IPR018221 Glycoside hydrolase family 9, His active site Clo1313_3023 IPR033126 Glycosyl hydrolases family 9, Asp/Glu active sites Clo1313_3023 IPR012341 Six-hairpin glycosidase-like superfamily Clo1313_3023 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily Clo1313_3023 IPR001956 Carbohydrate-binding module 3 Clo1313_3023 IPR036966 Carbohydrate-binding module 3 superfamily Clo1313_3023 IPR001701 Glycoside hydrolase family 9 Clo1313_3023 IPR008928 Six-hairpin glycosidase superfamily Clo1313_3024 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta Clo1313_3024 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily Clo1313_3024 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal Clo1313_3024 IPR005743 DNA gyrase, subunit A Clo1313_3024 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal Clo1313_3024 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat Clo1313_3024 IPR013760 DNA topoisomerase, type IIA-like domain superfamily Clo1313_3025 IPR041468 ParB/Spo0J, HTH domain Clo1313_3025 IPR023705 Nucleoid occlusion protein Clo1313_3025 IPR004437 ParB/RepB/Spo0J partition protein Clo1313_3025 IPR003115 ParB/Sulfiredoxin Clo1313_3025 IPR036086 ParB/Sulfiredoxin superfamily Clo1313_3026 IPR003682 rRNA small subunit methyltransferase G Clo1313_3026 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clo1313_3027 IPR020595 MnmG-related, conserved site Clo1313_3027 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related Clo1313_3027 IPR036188 FAD/NAD(P)-binding domain superfamily Clo1313_3027 IPR026904 GidA associated domain 3 Clo1313_3027 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG Clo1313_3028 IPR031168 TrmE-type guanine nucleotide-binding domain Clo1313_3028 IPR018948 GTP-binding protein TrmE, N-terminal Clo1313_3028 IPR006073 GTP binding domain Clo1313_3028 IPR004520 tRNA modification GTPase MnmE Clo1313_3028 IPR027368 tRNA modification GTPase MnmE domain 2 Clo1313_3028 IPR025867 MnmE, helical domain Clo1313_3028 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clo1313_3028 IPR005225 Small GTP-binding protein domain Clo1313_3028 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 Clo1313_3029 IPR034079 Jag, R3H domain Clo1313_3029 IPR036867 R3H domain superfamily Clo1313_3029 IPR001374 R3H domain Clo1313_3029 IPR015946 K homology domain-like, alpha/beta Clo1313_3029 IPR038008 Jag, KH domain Clo1313_3029 IPR032782 Jag, N-terminal Clo1313_3029 IPR039247 Jag protein Clo1313_3029 IPR038247 Jag, N-terminal domain superfamily Clo1313_3030 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Clo1313_3030 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 Clo1313_3031 IPR002696 Putative membrane protein insertion efficiency factor Clo1313_3032 IPR000100 Ribonuclease P Clo1313_3032 IPR020568 Ribosomal protein S5 domain 2-type fold Clo1313_3032 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Clo1313_3033 IPR000271 Ribosomal protein L34