locus-tag class description DB34_00010 PF00909 Ammonium Transporter Family DB34_00025 PF00561 alpha/beta hydrolase fold DB34_00030 PF02899 Phage integrase, N-terminal SAM-like domain DB34_00030 PF00589 Phage integrase family DB34_00035 PF00270 DEAD/DEAH box helicase DB34_00035 PF17764 3′ DNA-binding domain (3′BD) DB34_00035 PF18074 Primosomal protein N C-terminal domain DB34_00035 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DB34_00040 PF02699 Preprotein translocase subunit DB34_00050 PF00355 Rieske [2Fe-2S] domain DB34_00055 PF00293 NUDIX domain DB34_00060 PF01050 Mannose-6-phosphate isomerase DB34_00060 PF00483 Nucleotidyl transferase DB34_00070 PF01053 Cys/Met metabolism PLP-dependent enzyme DB34_00075 PF04379 ApaG domain DB34_00080 PF01227 GTP cyclohydrolase I DB34_00090 PF00994 Probable molybdopterin binding domain DB34_00120 PF13533 Biotin-lipoyl like DB34_00155 PF13340 Putative transposase of IS4/5 family (DUF4096) DB34_00160 PF00885 6,7-dimethyl-8-ribityllumazine synthase DB34_00165 PF00925 GTP cyclohydrolase II DB34_00165 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DB34_00170 PF00677 Lumazine binding domain DB34_00175 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DB34_00175 PF01872 RibD C-terminal domain DB34_00180 PF00033 Cytochrome b/b6/petB DB34_00180 PF00032 Cytochrome b(C-terminal)/b6/petD DB34_00180 PF02167 Cytochrome C1 family DB34_00185 PF00033 Cytochrome b/b6/petB DB34_00185 PF02167 Cytochrome C1 family DB34_00185 PF00032 Cytochrome b(C-terminal)/b6/petD DB34_00190 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal DB34_00190 PF00355 Rieske [2Fe-2S] domain DB34_00195 PF03358 NADPH-dependent FMN reductase DB34_00210 PF00860 Permease family DB34_00225 PF07859 alpha/beta hydrolase fold DB34_00260 PF08463 EcoEI R protein C-terminal DB34_00260 PF04851 Type III restriction enzyme, res subunit DB34_00260 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) DB34_00260 PF00271 Helicase conserved C-terminal domain DB34_00285 PF01527 Transposase DB34_00310 PF00829 Ribosomal prokaryotic L21 protein DB34_00315 PF01016 Ribosomal L27 protein DB34_00320 PF01018 GTP1/OBG DB34_00320 PF01926 50S ribosome-binding GTPase DB34_00325 PF01472 PUA domain DB34_00325 PF00696 Amino acid kinase family DB34_00335 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) DB34_00340 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DB34_00340 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DB34_00350 PF07859 alpha/beta hydrolase fold DB34_00355 PF02381 MraZ protein, putative antitoxin-like DB34_00360 PF01795 MraW methylase family DB34_00370 PF00905 Penicillin binding protein transpeptidase domain DB34_00370 PF03717 Penicillin-binding Protein dimerisation domain DB34_00375 PF08245 Mur ligase middle domain DB34_00375 PF02875 Mur ligase family, glutamate ligase domain DB34_00375 PF01225 Mur ligase family, catalytic domain DB34_00380 PF08245 Mur ligase middle domain DB34_00380 PF01225 Mur ligase family, catalytic domain DB34_00380 PF02875 Mur ligase family, glutamate ligase domain DB34_00385 PF00953 Glycosyl transferase family 4 DB34_00385 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 DB34_00390 PF08245 Mur ligase middle domain DB34_00390 PF02875 Mur ligase family, glutamate ligase domain DB34_00395 PF01098 Cell cycle protein DB34_00400 PF03033 Glycosyltransferase family 28 N-terminal domain DB34_00400 PF04101 Glycosyltransferase family 28 C-terminal domain DB34_00405 PF08245 Mur ligase middle domain DB34_00405 PF02875 Mur ligase family, glutamate ligase domain DB34_00405 PF01225 Mur ligase family, catalytic domain DB34_00410 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DB34_00410 PF01565 FAD binding domain DB34_00415 PF01820 D-ala D-ala ligase N-terminus DB34_00415 PF07478 D-ala D-ala ligase C-terminus DB34_00420 PF08478 POTRA domain, FtsQ-type DB34_00420 PF03799 Cell division protein FtsQ DB34_00425 PF02491 SHS2 domain inserted in FTSA DB34_00430 PF00091 Tubulin/FtsZ family, GTPase domain DB34_00430 PF12327 FtsZ family, C-terminal domain DB34_00435 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase DB34_00440 PF13525 Outer membrane lipoprotein DB34_00445 PF02463 RecF/RecN/SMC N terminal domain DB34_00450 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DB34_00450 PF12826 Helix-hairpin-helix motif DB34_00450 PF03120 NAD-dependent DNA ligase OB-fold domain DB34_00450 PF01653 NAD-dependent DNA ligase adenylation domain DB34_00450 PF00533 BRCA1 C Terminus (BRCT) domain DB34_00455 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DB34_00455 PF00391 PEP-utilising enzyme, mobile domain DB34_00455 PF02896 PEP-utilising enzyme, TIM barrel domain DB34_00460 PF03618 Kinase/pyrophosphorylase DB34_00470 PF01205 Uncharacterized protein family UPF0029 DB34_00480 PF01474 Class-II DAHP synthetase family DB34_00495 PF00749 tRNA synthetases class I (E and Q), catalytic domain DB34_00500 PF00857 Isochorismatase family DB34_00510 PF00403 Heavy-metal-associated domain DB34_00520 PF07731 Multicopper oxidase DB34_00520 PF07732 Multicopper oxidase DB34_00520 PF00394 Multicopper oxidase DB34_00525 PF05275 Copper resistance protein B precursor (CopB) DB34_00530 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DB34_00530 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DB34_00535 PF10369 Small subunit of acetolactate synthase DB34_00540 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DB34_00540 PF00205 Thiamine pyrophosphate enzyme, central domain DB34_00540 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DB34_00565 PF00270 DEAD/DEAH box helicase DB34_00565 PF00271 Helicase conserved C-terminal domain DB34_00580 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family DB34_00585 PF00464 Serine hydroxymethyltransferase DB34_00590 PF13520 Amino acid permease DB34_00595 PF00490 Delta-aminolevulinic acid dehydratase DB34_00600 PF04377 Arginine-tRNA-protein transferase, C terminus DB34_00600 PF04376 Arginine-tRNA-protein transferase, N terminus DB34_00605 PF00521 DNA gyrase/topoisomerase IV, subunit A DB34_00605 PF03989 DNA gyrase C-terminal domain, beta-propeller DB34_00610 PF11967 Recombination protein O N terminal DB34_00610 PF02565 Recombination protein O C terminal DB34_00615 PF00889 Elongation factor TS DB34_00620 PF00318 Ribosomal protein S2 DB34_00625 PF00355 Rieske [2Fe-2S] domain DB34_00645 PF00425 chorismate binding enzyme DB34_00645 PF04715 Anthranilate synthase component I, N terminal region DB34_00650 PF07733 Bacterial DNA polymerase III alpha NTPase domain DB34_00650 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DB34_00650 PF14579 Helix-hairpin-helix motif DB34_00650 PF02811 PHP domain DB34_00660 PF02569 Pantoate-beta-alanine ligase DB34_00665 PF01042 Endoribonuclease L-PSP DB34_00690 PF00749 tRNA synthetases class I (E and Q), catalytic domain DB34_00715 PF04055 Radical SAM superfamily DB34_00715 PF02310 B12 binding domain DB34_00720 PF00334 Nucleoside diphosphate kinase DB34_00725 PF00005 ABC transporter DB34_00725 PF12848 ABC transporter DB34_00735 PF00486 Transcriptional regulatory protein, C terminal DB34_00735 PF00072 Response regulator receiver domain DB34_00740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DB34_00740 PF00512 His Kinase A (phospho-acceptor) domain DB34_00750 PF00707 Translation initiation factor IF-3, C-terminal domain DB34_00750 PF05198 Translation initiation factor IF-3, N-terminal domain DB34_00755 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DB34_00755 PF03129 Anticodon binding domain DB34_00755 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DB34_00755 PF02824 TGS domain DB34_00775 PF01513 ATP-NAD kinase DB34_00790 PF00075 RNase H DB34_00795 PF01636 Phosphotransferase enzyme family DB34_00800 PF02401 LytB protein DB34_00810 PF03109 ABC1 family DB34_00820 PF04898 Glutamate synthase central domain DB34_00820 PF01645 Conserved region in glutamate synthase DB34_00820 PF01493 GXGXG motif DB34_00820 PF00310 Glutamine amidotransferases class-II DB34_00825 PF07992 Pyridine nucleotide-disulphide oxidoreductase DB34_00825 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DB34_00845 PF01520 N-acetylmuramoyl-L-alanine amidase DB34_00850 PF00575 S1 RNA binding domain DB34_00850 PF10150 Ribonuclease E/G family DB34_00850 PF12111 Polyribonucleotide phosphorylase C terminal DB34_00855 PF01634 ATP phosphoribosyltransferase DB34_00860 PF00815 Histidinol dehydrogenase DB34_00865 PF01176 Translation initiation factor 1A / IF-1 DB34_00870 PF02545 Maf-like protein DB34_00880 PF03884 DNA gyrase inhibitor YacG DB34_00975 PF00171 Aldehyde dehydrogenase family DB34_00980 PF09330 D-lactate dehydrogenase, membrane binding DB34_00980 PF01565 FAD binding domain DB34_00985 PF10005 zinc-ribbon domain DB34_00985 PF15887 Putative zinc-binding metallo-peptidase DB34_00995 PF14403 Circularly permuted ATP-grasp type 2 DB34_01005 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DB34_01005 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DB34_01010 PF02445 Quinolinate synthetase A protein DB34_01025 PF00440 Bacterial regulatory proteins, tetR family DB34_01025 PF16925 Tetracyclin repressor-like, C-terminal domain DB34_01030 PF07992 Pyridine nucleotide-disulphide oxidoreductase DB34_01035 PF00171 Aldehyde dehydrogenase family DB34_01050 PF07690 Major Facilitator Superfamily DB34_01060 PF03358 NADPH-dependent FMN reductase DB34_01065 PF05726 Pirin C-terminal cupin domain DB34_01065 PF02678 Pirin DB34_01070 PF03466 LysR substrate binding domain DB34_01070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DB34_01075 PF02472 Biopolymer transport protein ExbD/TolR DB34_01080 PF02472 Biopolymer transport protein ExbD/TolR DB34_01085 PF01618 MotA/TolQ/ExbB proton channel family DB34_01105 PF00892 EamA-like transporter family DB34_01110 PF03746 LamB/YcsF family DB34_01115 PF02626 Carboxyltransferase domain, subdomain A and B DB34_01125 PF00106 short chain dehydrogenase DB34_01135 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DB34_01135 PF02785 Biotin carboxylase C-terminal domain DB34_01135 PF00289 Biotin carboxylase, N-terminal domain DB34_01150 PF03466 LysR substrate binding domain DB34_01150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DB34_01155 PF01425 Amidase DB34_01160 PF00106 short chain dehydrogenase DB34_01170 PF11941 Domain of unknown function (DUF3459) DB34_01170 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DB34_01170 PF00128 Alpha amylase, catalytic domain DB34_01175 PF02806 Alpha amylase, C-terminal all-beta domain DB34_01175 PF00128 Alpha amylase, catalytic domain DB34_01175 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DB34_01180 PF00534 Glycosyl transferases group 1 DB34_01180 PF08323 Starch synthase catalytic domain DB34_01185 PF00128 Alpha amylase, catalytic domain DB34_01185 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DB34_01200 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DB34_01200 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DB34_01200 PF00205 Thiamine pyrophosphate enzyme, central domain DB34_01205 PF01494 FAD binding domain DB34_01210 PF02630 SCO1/SenC DB34_01265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DB34_01265 PF03466 LysR substrate binding domain DB34_01295 PF13098 Thioredoxin-like domain DB34_01295 PF11412 Disulphide bond corrector protein DsbC DB34_01295 PF02683 Cytochrome C biogenesis protein transmembrane region DB34_01300 PF00893 Small Multidrug Resistance protein DB34_01305 PF02403 Seryl-tRNA synthetase N-terminal domain DB34_01305 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DB34_01310 PF00902 Sec-independent protein translocase protein (TatC) DB34_01315 PF02416 mttA/Hcf106 family DB34_01320 PF04079 Segregation and condensation complex subunit ScpB DB34_01325 PF02616 Segregation and condensation protein ScpA DB34_01335 PF03485 Arginyl tRNA synthetase N terminal domain DB34_01335 PF05746 DALR anticodon binding domain DB34_01335 PF00750 tRNA synthetases class I (R) DB34_01340 PF13286 Phosphohydrolase-associated domain DB34_01340 PF01966 HD domain DB34_01345 PF01521 Iron-sulphur cluster biosynthesis DB34_01350 PF03372 Endonuclease/Exonuclease/phosphatase family DB34_01355 PF00561 alpha/beta hydrolase fold DB34_01375 PF12706 Beta-lactamase superfamily domain DB34_01380 PF03070 TENA/THI-4/PQQC family DB34_01385 PF05402 Coenzyme PQQ synthesis protein D (PqqD) DB34_01390 PF04055 Radical SAM superfamily DB34_01390 PF13186 Iron-sulfur cluster-binding domain DB34_01400 PF00574 Clp protease DB34_01410 PF00155 Aminotransferase class I and II DB34_01415 PF03447 Homoserine dehydrogenase, NAD binding domain DB34_01415 PF00742 Homoserine dehydrogenase DB34_01415 PF01842 ACT domain DB34_01420 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded DB34_01425 PF17768 RecJ OB domain DB34_01425 PF02272 DHHA1 domain DB34_01425 PF01368 DHH family DB34_01430 PF00140 Sigma-70 factor, region 1.2 DB34_01430 PF04545 Sigma-70, region 4 DB34_01430 PF04542 Sigma-70 region 2 DB34_01435 PF00849 RNA pseudouridylate synthase DB34_01440 PF01032 FecCD transport family DB34_01445 PF00005 ABC transporter DB34_01450 PF02696 Uncharacterized ACR, YdiU/UPF0061 family DB34_01460 PF01063 Amino-transferase class IV DB34_01465 PF01367 5'-3' exonuclease, C-terminal SAM fold DB34_01465 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DB34_01465 PF01612 3'-5' exonuclease DB34_01465 PF00476 DNA polymerase family A DB34_01480 PF08946 Osmosensory transporter coiled coil DB34_01480 PF00083 Sugar (and other) transporter DB34_01485 PF02322 Cytochrome bd terminal oxidase subunit II DB34_01490 PF01654 Cytochrome bd terminal oxidase subunit I DB34_01500 PF04454 Encapsulating protein for peroxidase DB34_01505 PF00324 Amino acid permease DB34_01515 PF13360 PQQ-like domain DB34_01515 PF01011 PQQ enzyme repeat DB34_01525 PF13340 Putative transposase of IS4/5 family (DUF4096) DB34_01530 PF14552 Tautomerase enzyme DB34_01535 PF00202 Aminotransferase class-III DB34_01540 PF00392 Bacterial regulatory proteins, gntR family DB34_01540 PF00155 Aminotransferase class I and II DB34_01545 PF07687 Peptidase dimerisation domain DB34_01545 PF01546 Peptidase family M20/M25/M40 DB34_01550 PF01180 Dihydroorotate dehydrogenase DB34_01555 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DB34_01555 PF07992 Pyridine nucleotide-disulphide oxidoreductase DB34_01570 PF01979 Amidohydrolase family DB34_01575 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin DB34_01590 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DB34_01595 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DB34_01605 PF02556 Preprotein translocase subunit SecB DB34_01615 PF04166 Pyridoxal phosphate biosynthetic protein PdxA DB34_01620 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ DB34_01630 PF03702 Anhydro-N-acetylmuramic acid kinase DB34_01640 PF00474 Sodium:solute symporter family DB34_01650 PF13532 2OG-Fe(II) oxygenase superfamily DB34_01655 PF00144 Beta-lactamase DB34_01660 PF01381 Helix-turn-helix DB34_01665 PF00970 Oxidoreductase FAD-binding domain DB34_01665 PF00042 Globin DB34_01665 PF00175 Oxidoreductase NAD-binding domain DB34_01670 PF00528 Binding-protein-dependent transport system inner membrane component DB34_01675 PF00005 ABC transporter DB34_01675 PF09383 NIL domain DB34_01680 PF03180 NLPA lipoprotein DB34_01685 PF01565 FAD binding domain DB34_01685 PF02913 FAD linked oxidases, C-terminal domain DB34_01690 PF10414 Sirohaem synthase dimerisation region DB34_01690 PF14824 Sirohaem biosynthesis protein central DB34_01690 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DB34_01700 PF01613 Flavin reductase like domain DB34_01715 PF02371 Transposase IS116/IS110/IS902 family DB34_01715 PF01548 Transposase DB34_01730 PF00296 Luciferase-like monooxygenase DB34_01735 PF07690 Major Facilitator Superfamily DB34_01740 PF02668 Taurine catabolism dioxygenase TauD, TfdA family DB34_01745 PF18331 PKHD-type hydroxylase C-terminal domain DB34_01745 PF13640 2OG-Fe(II) oxygenase superfamily DB34_01760 PF07715 TonB-dependent Receptor Plug Domain DB34_01760 PF00593 TonB dependent receptor DB34_01770 PF13340 Putative transposase of IS4/5 family (DUF4096) DB34_01775 PF01618 MotA/TolQ/ExbB proton channel family DB34_01780 PF02472 Biopolymer transport protein ExbD/TolR DB34_01795 PF00355 Rieske [2Fe-2S] domain DB34_01800 PF00375 Sodium:dicarboxylate symporter family DB34_01825 PF00034 Cytochrome c DB34_01825 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DB34_01830 PF00171 Aldehyde dehydrogenase family DB34_01835 PF07690 Major Facilitator Superfamily DB34_01840 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase DB34_01845 PF02277 Phosphoribosyltransferase DB34_01850 PF02654 Cobalamin-5-phosphate synthase DB34_01855 PF00155 Aminotransferase class I and II DB34_01860 PF03186 CobD/Cbib protein DB34_01865 PF00881 Nitroreductase family DB34_01870 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DB34_01870 PF07685 CobB/CobQ-like glutamine amidotransferase domain DB34_01875 PF12557 Cob(I)alamin adenosyltransferase N terminal DB34_01875 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP DB34_01885 PF07685 CobB/CobQ-like glutamine amidotransferase domain DB34_01885 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DB34_01890 PF02514 CobN/Magnesium Chelatase DB34_01895 PF02492 CobW/HypB/UreG, nucleotide-binding domain DB34_01895 PF07683 Cobalamin synthesis protein cobW C-terminal domain DB34_01910 PF04632 Fusaric acid resistance protein family DB34_01915 PF01184 GPR1/FUN34/yaaH family DB34_01920 PF00378 Enoyl-CoA hydratase/isomerase DB34_01925 PF01613 Flavin reductase like domain DB34_01930 PF00950 ABC 3 transport family DB34_01935 PF00005 ABC transporter DB34_01945 PF01475 Ferric uptake regulator family DB34_01960 PF01008 Initiation factor 2 subunit family DB34_01975 PF00291 Pyridoxal-phosphate dependent enzyme DB34_01980 PF00117 Glutamine amidotransferase class-I DB34_01980 PF02540 NAD synthase DB34_01980 PF00958 GMP synthase C terminal domain DB34_01995 PF00083 Sugar (and other) transporter DB34_02000 PF10145 Phage-related minor tail protein DB34_02000 PF01464 Transglycosylase SLT domain DB34_02000 PF01551 Peptidase family M23 DB34_02005 PF02652 L-lactate permease DB34_02015 PF01370 NAD dependent epimerase/dehydratase family DB34_02020 PF01790 Prolipoprotein diacylglyceryl transferase DB34_02055 PF00005 ABC transporter DB34_02060 PF02694 Uncharacterised BCR, YnfA/UPF0060 family DB34_02075 PF00155 Aminotransferase class I and II DB34_02085 PF02779 Transketolase, pyrimidine binding domain DB34_02085 PF02780 Transketolase, C-terminal domain DB34_02085 PF00456 Transketolase, thiamine diphosphate binding domain DB34_02090 PF00923 Transaldolase/Fructose-6-phosphate aldolase DB34_02095 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DB34_02095 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DB34_02105 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DB34_02110 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DB34_02135 PF00654 Voltage gated chloride channel DB34_02145 PF01168 Alanine racemase, N-terminal domain DB34_02150 PF02705 K+ potassium transporter DB34_02155 PF04055 Radical SAM superfamily DB34_02155 PF06969 HemN C-terminal domain DB34_02175 PF00005 ABC transporter DB34_02180 PF12399 Branched-chain amino acid ATP-binding cassette transporter DB34_02180 PF00005 ABC transporter DB34_02190 PF02653 Branched-chain amino acid transport system / permease component DB34_02200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DB34_02200 PF00512 His Kinase A (phospho-acceptor) domain DB34_02200 PF00497 Bacterial extracellular solute-binding proteins, family 3 DB34_02200 PF01627 Hpt domain DB34_02200 PF00072 Response regulator receiver domain DB34_02205 PF00486 Transcriptional regulatory protein, C terminal DB34_02205 PF00072 Response regulator receiver domain DB34_02245 PF02492 CobW/HypB/UreG, nucleotide-binding domain DB34_02250 PF01730 UreF DB34_02255 PF02814 UreE urease accessory protein, N-terminal domain DB34_02255 PF05194 UreE urease accessory protein, C-terminal domain DB34_02260 PF01979 Amidohydrolase family DB34_02260 PF00449 Urease alpha-subunit, N-terminal domain DB34_02265 PF00699 Urease beta subunit DB34_02270 PF00547 Urease, gamma subunit DB34_02275 PF01774 UreD urease accessory protein DB34_02280 PF03824 High-affinity nickel-transport protein DB34_02285 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DB34_02285 PF00205 Thiamine pyrophosphate enzyme, central domain DB34_02285 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DB34_02305 PF00210 Ferritin-like domain DB34_02310 PF03960 ArsC family DB34_02320 PF03352 Methyladenine glycosylase DB34_02330 PF10417 C-terminal domain of 1-Cys peroxiredoxin DB34_02330 PF00578 AhpC/TSA family DB34_02335 PF00753 Metallo-beta-lactamase superfamily DB34_02340 PF01925 Sulfite exporter TauE/SafE DB34_02350 PF03960 ArsC family DB34_02365 PF02321 Outer membrane efflux protein DB34_02370 PF13533 Biotin-lipoyl like DB34_02380 PF03466 LysR substrate binding domain DB34_02380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DB34_02390 PF07690 Major Facilitator Superfamily DB34_02395 PF17645 Arylmalonate decarboxylase DB34_02400 PF00561 alpha/beta hydrolase fold DB34_02405 PF00857 Isochorismatase family DB34_02415 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DB34_02415 PF00034 Cytochrome c DB34_02415 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DB34_02420 PF01799 [2Fe-2S] binding domain DB34_02420 PF00111 2Fe-2S iron-sulfur cluster binding domain DB34_02425 PF01494 FAD binding domain DB34_02430 PF12802 MarR family DB34_02465 PF01370 NAD dependent epimerase/dehydratase family DB34_02475 PF00753 Metallo-beta-lactamase superfamily DB34_02485 PF13478 XdhC Rossmann domain DB34_02485 PF02625 XdhC and CoxI family DB34_02505 PF02347 Glycine cleavage system P-protein DB34_02510 PF01597 Glycine cleavage H-protein DB34_02515 PF01571 Aminomethyltransferase folate-binding domain DB34_02515 PF08669 Glycine cleavage T-protein C-terminal barrel domain DB34_02520 PF17284 Spermidine synthase tetramerisation domain DB34_02525 PF02675 S-adenosylmethionine decarboxylase DB34_02535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DB34_02535 PF03466 LysR substrate binding domain DB34_02545 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DB34_02550 PF01467 Cytidylyltransferase-like DB34_02555 PF00521 DNA gyrase/topoisomerase IV, subunit A DB34_02555 PF03989 DNA gyrase C-terminal domain, beta-propeller DB34_02570 PF03725 3' exoribonuclease family, domain 2 DB34_02570 PF01138 3' exoribonuclease family, domain 1 DB34_02570 PF00575 S1 RNA binding domain DB34_02570 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DB34_02570 PF00013 KH domain DB34_02575 PF00312 Ribosomal protein S15 DB34_02580 PF16198 tRNA pseudouridylate synthase B C-terminal domain DB34_02580 PF01509 TruB family pseudouridylate synthase (N terminal domain) DB34_02585 PF02405 Permease MlaE DB34_02590 PF00005 ABC transporter DB34_02595 PF02470 MlaD protein DB34_02630 PF03412 Peptidase C39 family DB34_02630 PF00664 ABC transporter transmembrane region DB34_02630 PF00005 ABC transporter DB34_02640 PF02574 Homocysteine S-methyltransferase DB34_02640 PF00809 Pterin binding enzyme DB34_02640 PF02965 Vitamin B12 dependent methionine synthase, activation domain DB34_02640 PF02607 B12 binding domain DB34_02640 PF02310 B12 binding domain DB34_02655 PF13537 Glutamine amidotransferase domain DB34_02655 PF00156 Phosphoribosyl transferase domain DB34_02665 PF02470 MlaD protein DB34_02670 PF04403 Paraquat-inducible protein A DB34_02680 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase DB34_02685 PF00535 Glycosyl transferase family 2 DB34_02690 PF00430 ATP synthase B/B' CF(0) DB34_02695 PF00430 ATP synthase B/B' CF(0) DB34_02700 PF00137 ATP synthase subunit C DB34_02705 PF00119 ATP synthase A chain DB34_02710 PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter DB34_02715 PF02881 SRP54-type protein, helical bundle domain DB34_02715 PF00448 SRP54-type protein, GTPase domain DB34_02720 PF00919 Uncharacterized protein family UPF0004 DB34_02720 PF04055 Radical SAM superfamily DB34_02725 PF01678 Diaminopimelate epimerase DB34_02730 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DB34_02740 PF00271 Helicase conserved C-terminal domain DB34_02740 PF00270 DEAD/DEAH box helicase DB34_02740 PF03880 DbpA RNA binding domain DB34_02755 PF00380 Ribosomal protein S9/S16 DB34_02760 PF00572 Ribosomal protein L13 DB34_02775 PF01895 PhoU domain DB34_02780 PF00005 ABC transporter DB34_02785 PF00528 Binding-protein-dependent transport system inner membrane component DB34_02790 PF00528 Binding-protein-dependent transport system inner membrane component DB34_02795 PF00920 Dehydratase family DB34_02805 PF00107 Zinc-binding dehydrogenase DB34_02805 PF08240 Alcohol dehydrogenase GroES-like domain DB34_02815 PF13180 PDZ domain DB34_02830 PF10609 NUBPL iron-transfer P-loop NTPase DB34_02845 PF02511 Thymidylate synthase complementing protein DB34_02855 PF05681 Fumarate hydratase (Fumerase) DB34_02855 PF05683 Fumarase C-terminus DB34_02860 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DB34_02870 PF01266 FAD dependent oxidoreductase DB34_02875 PF01168 Alanine racemase, N-terminal domain DB34_02875 PF00842 Alanine racemase, C-terminal domain DB34_02880 PF01037 Lrp/AsnC ligand binding domain DB34_02885 PF02033 Ribosome-binding factor A DB34_02890 PF08364 Bacterial translation initiation factor IF-2 associated region DB34_02890 PF11987 Translation-initiation factor 2 DB34_02890 PF04760 Translation initiation factor IF-2, N-terminal region DB34_02890 PF00009 Elongation factor Tu GTP binding domain DB34_02900 PF00575 S1 RNA binding domain DB34_02900 PF08529 NusA N-terminal domain DB34_02900 PF13184 NusA-like KH domain DB34_02905 PF02576 RimP N-terminal domain DB34_02905 PF17384 RimP C-terminal SH3 domain DB34_02915 PF02861 Clp amino terminal domain, pathogenicity island component DB34_02915 PF00004 ATPase family associated with various cellular activities (AAA) DB34_02915 PF17871 AAA lid domain DB34_02915 PF07724 AAA domain (Cdc48 subfamily) DB34_02915 PF10431 C-terminal, D2-small domain, of ClpB protein DB34_02925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DB34_02925 PF03466 LysR substrate binding domain DB34_02930 PF00528 Binding-protein-dependent transport system inner membrane component DB34_02935 PF00005 ABC transporter DB34_02940 PF00330 Aconitase family (aconitate hydratase) DB34_02940 PF00694 Aconitase C-terminal domain DB34_02950 PF00005 ABC transporter DB34_02955 PF03379 CcmB protein DB34_02965 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DB34_02965 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DB34_02970 PF03631 Virulence factor BrkB DB34_02975 PF03330 Lytic transglycolase DB34_02975 PF05036 Sporulation related domain DB34_02980 PF01220 Dehydroquinase class II DB34_02985 PF00364 Biotin-requiring enzyme DB34_02990 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DB34_02990 PF02785 Biotin carboxylase C-terminal domain DB34_02990 PF00289 Biotin carboxylase, N-terminal domain DB34_02995 PF00083 Sugar (and other) transporter DB34_03000 PF13667 ThiC-associated domain DB34_03000 PF01964 Radical SAM ThiC family DB34_03015 PF03239 Iron permease FTR1 family DB34_03020 PF10634 Fe2+ transport protein DB34_03025 PF04966 Carbohydrate-selective porin, OprB family DB34_03045 PF00202 Aminotransferase class-III DB34_03055 PF03652 Holliday junction resolvase DB34_03060 PF02686 Glu-tRNAGln amidotransferase C subunit DB34_03065 PF01425 Amidase DB34_03070 PF02934 GatB/GatE catalytic domain DB34_03070 PF02637 GatB domain DB34_03225 PF00005 ABC transporter DB34_03225 PF00664 ABC transporter transmembrane region DB34_03230 PF00633 Helix-hairpin-helix motif DB34_03230 PF10576 Iron-sulfur binding domain of endonuclease III DB34_03230 PF00730 HhH-GPD superfamily base excision DNA repair protein DB34_03235 PF00762 Ferrochelatase DB34_03240 PF00633 Helix-hairpin-helix motif DB34_03240 PF14815 NUDIX domain DB34_03240 PF00730 HhH-GPD superfamily base excision DNA repair protein DB34_03260 PF12100 Domain of unknown function (DUF3576) DB34_03265 PF13603 Leucyl-tRNA synthetase, Domain 2 DB34_03265 PF08264 Anticodon-binding domain of tRNA DB34_03265 PF00133 tRNA synthetases class I (I, L, M and V) DB34_03310 PF02321 Outer membrane efflux protein DB34_03320 PF01012 Electron transfer flavoprotein domain DB34_03320 PF00766 Electron transfer flavoprotein FAD-binding domain DB34_03325 PF01012 Electron transfer flavoprotein domain DB34_03340 PF04055 Radical SAM superfamily DB34_03350 PF00027 Cyclic nucleotide-binding domain DB34_03350 PF13545 Crp-like helix-turn-helix domain DB34_03355 PF13180 PDZ domain DB34_03360 PF14437 MafB19-like deaminase DB34_03365 PF07722 Peptidase C26 DB34_03370 PF00849 RNA pseudouridylate synthase DB34_03370 PF01479 S4 domain DB34_03380 PF00436 Single-strand binding protein family DB34_03390 PF01258 Prokaryotic dksA/traR C4-type zinc finger DB34_03410 PF02796 Helix-turn-helix domain of resolvase DB34_03410 PF00239 Resolvase, N terminal domain DB34_03420 PF13439 Glycosyltransferase Family 4 DB34_03420 PF00534 Glycosyl transferases group 1 DB34_03430 PF00579 tRNA synthetases class I (W and Y) DB34_03435 PF01523 Putative modulator of DNA gyrase DB34_03440 PF00300 Histidine phosphatase superfamily (branch 1) DB34_03450 PF16363 GDP-mannose 4,6 dehydratase DB34_03455 PF00483 Nucleotidyl transferase DB34_03460 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DB34_03465 PF04321 RmlD substrate binding domain DB34_03470 PF00535 Glycosyl transferase family 2 DB34_03475 PF17854 FtsK alpha domain DB34_03475 PF13491 4TM region of DNA translocase FtsK/SpoIIIE DB34_03475 PF01580 FtsK/SpoIIIE family DB34_03475 PF09397 Ftsk gamma domain DB34_03480 PF01479 S4 domain DB34_03480 PF00849 RNA pseudouridylate synthase DB34_03485 PF13340 Putative transposase of IS4/5 family (DUF4096) DB34_03495 PF00534 Glycosyl transferases group 1 DB34_03495 PF13439 Glycosyltransferase Family 4 DB34_03510 PF00111 2Fe-2S iron-sulfur cluster binding domain DB34_03515 PF00266 Aminotransferase class-V DB34_03525 PF02129 X-Pro dipeptidyl-peptidase (S15 family) DB34_03535 PF09190 DALR domain DB34_03535 PF01406 tRNA synthetases class I (C) catalytic domain DB34_03545 PF02875 Mur ligase family, glutamate ligase domain DB34_03545 PF08245 Mur ligase middle domain DB34_03550 PF17848 Acetyl-coA carboxylase zinc finger domain DB34_03550 PF01039 Carboxyl transferase domain DB34_03555 PF00085 Thioredoxin DB34_03560 PF12705 PD-(D/E)XK nuclease superfamily DB34_03560 PF00580 UvrD/REP helicase N-terminal domain DB34_03560 PF13361 UvrD-like helicase C-terminal domain DB34_03565 PF12705 PD-(D/E)XK nuclease superfamily DB34_03570 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DB34_03575 PF00486 Transcriptional regulatory protein, C terminal DB34_03575 PF00072 Response regulator receiver domain DB34_03580 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DB34_03580 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DB34_03580 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DB34_03580 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DB34_03585 PF00809 Pterin binding enzyme DB34_03590 PF01434 Peptidase family M41 DB34_03590 PF17862 AAA+ lid domain DB34_03590 PF00004 ATPase family associated with various cellular activities (AAA) DB34_03590 PF06480 FtsH Extracellular DB34_03595 PF01171 PP-loop family DB34_03605 PF00691 OmpA family DB34_03610 PF07676 WD40-like Beta Propeller Repeat DB34_03610 PF04052 TolB amino-terminal domain DB34_03620 PF02472 Biopolymer transport protein ExbD/TolR DB34_03625 PF01618 MotA/TolQ/ExbB proton channel family DB34_03630 PF03061 Thioesterase superfamily DB34_03635 PF05491 RuvB C-terminal winged helix domain DB34_03635 PF17864 RuvB AAA lid domain DB34_03635 PF05496 Holliday junction DNA helicase RuvB P-loop domain DB34_03640 PF01330 RuvA N terminal domain DB34_03640 PF07499 RuvA, C-terminal domain DB34_03645 PF02075 Crossover junction endodeoxyribonuclease RuvC DB34_03650 PF01709 Transcriptional regulator DB34_03655 PF07517 SecA DEAD-like domain DB34_03655 PF02810 SEC-C motif DB34_03655 PF07516 SecA Wing and Scaffold domain DB34_03655 PF01043 SecA preprotein cross-linking domain DB34_03665 PF01960 ArgJ family DB34_03675 PF00924 Mechanosensitive ion channel DB34_03710 PF14748 Pyrroline-5-carboxylate reductase dimerisation DB34_03710 PF03807 NADP oxidoreductase coenzyme F420-dependent DB34_03730 PF13340 Putative transposase of IS4/5 family (DUF4096) DB34_03740 PF00216 Bacterial DNA-binding protein DB34_03760 PF00535 Glycosyl transferase family 2 DB34_03760 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase DB34_03770 PF00795 Carbon-nitrogen hydrolase DB34_03770 PF02540 NAD synthase DB34_03775 PF00475 Imidazoleglycerol-phosphate dehydratase DB34_03780 PF00117 Glutamine amidotransferase class-I DB34_03785 PF00977 Histidine biosynthesis protein DB34_03790 PF00977 Histidine biosynthesis protein DB34_03795 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase DB34_03800 PF01230 HIT domain DB34_03805 PF00881 Nitroreductase family DB34_03810 PF01494 FAD binding domain DB34_03815 PF13811 Domain of unknown function (DUF4186) DB34_03835 PF17762 HTH domain found in ParB protein DB34_03835 PF02195 ParB-like nuclease domain DB34_03840 PF13614 AAA domain DB34_03845 PF02527 rRNA small subunit methyltransferase G DB34_03850 PF01134 Glucose inhibited division protein A DB34_03850 PF13932 GidA associated domain DB34_03855 PF12631 MnmE helical domain DB34_03855 PF01926 50S ribosome-binding GTPase DB34_03855 PF10396 GTP-binding protein TrmE N-terminus DB34_03860 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DB34_03860 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DB34_03880 PF03641 Possible lysine decarboxylase DB34_03885 PF07690 Major Facilitator Superfamily DB34_03900 PF13419 Haloacid dehalogenase-like hydrolase DB34_03905 PF01208 Uroporphyrinogen decarboxylase (URO-D) DB34_03910 PF02545 Maf-like protein DB34_03940 PF02796 Helix-turn-helix domain of resolvase DB34_03940 PF00239 Resolvase, N terminal domain DB34_04000 PF00589 Phage integrase family DB34_04000 PF13356 Arm DNA-binding domain DB34_04005 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 DB34_04015 PF07690 Major Facilitator Superfamily DB34_04025 PF03966 Trm112p-like protein DB34_04030 PF00004 ATPase family associated with various cellular activities (AAA) DB34_04030 PF02190 ATP-dependent protease La (LON) substrate-binding domain DB34_04030 PF05362 Lon protease (S16) C-terminal proteolytic domain DB34_04035 PF00085 Thioredoxin DB34_04040 PF17755 UvrA DNA-binding domain DB34_04040 PF17760 UvrA interaction domain DB34_04065 PF00881 Nitroreductase family DB34_04075 PF00583 Acetyltransferase (GNAT) family DB34_04080 PF02844 Phosphoribosylglycinamide synthetase, N domain DB34_04080 PF02843 Phosphoribosylglycinamide synthetase, C domain DB34_04080 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DB34_04085 PF13742 OB-fold nucleic acid binding domain DB34_04085 PF02601 Exonuclease VII, large subunit DB34_04130 PF00171 Aldehyde dehydrogenase family DB34_04135 PF00107 Zinc-binding dehydrogenase DB34_04135 PF08240 Alcohol dehydrogenase GroES-like domain DB34_04140 PF02233 NAD(P) transhydrogenase beta subunit DB34_04145 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch DB34_04150 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DB34_04150 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DB34_04155 PF01118 Semialdehyde dehydrogenase, NAD binding domain DB34_04155 PF02774 Semialdehyde dehydrogenase, dimerisation domain DB34_04160 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DB34_04165 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DB34_04170 PF00890 FAD binding domain DB34_04170 PF02910 Fumarate reductase flavoprotein C-term DB34_04175 PF13085 2Fe-2S iron-sulfur cluster binding domain DB34_04185 PF00892 EamA-like transporter family DB34_04190 PF00162 Phosphoglycerate kinase DB34_04195 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DB34_04195 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DB34_04200 PF00456 Transketolase, thiamine diphosphate binding domain DB34_04200 PF02779 Transketolase, pyrimidine binding domain DB34_04200 PF02780 Transketolase, C-terminal domain DB34_04210 PF00155 Aminotransferase class I and II DB34_04215 PF13462 Thioredoxin DB34_04225 PF00154 recA bacterial DNA recombination protein DB34_04235 PF03459 TOBE domain DB34_04235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DB34_04240 PF04349 Periplasmic glucan biosynthesis protein, MdoG DB34_04245 PF13632 Glycosyl transferase family group 2 DB34_04250 PF01979 Amidohydrolase family DB34_04255 PF07690 Major Facilitator Superfamily DB34_04265 PF12170 DNA polymerase III tau subunit V interacting with alpha DB34_04265 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding DB34_04265 PF12169 DNA polymerase III subunits gamma and tau domain III DB34_04270 PF02575 YbaB/EbfC DNA-binding family DB34_04275 PF02132 RecR protein DB34_04275 PF13662 Toprim domain DB34_04285 PF02152 Dihydroneopterin aldolase DB34_04295 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DB34_04300 PF02224 Cytidylate kinase DB34_04310 PF00575 S1 RNA binding domain DB34_04325 PF01725 Ham1 family DB34_04330 PF03725 3' exoribonuclease family, domain 2 DB34_04330 PF01138 3' exoribonuclease family, domain 1 DB34_04335 PF01628 HrcA protein C terminal domain DB34_04340 PF17092 Penicillin-binding protein OB-like domain DB34_04340 PF00912 Transglycosylase DB34_04340 PF00905 Penicillin binding protein transpeptidase domain DB34_04345 PF03462 PCRF domain DB34_04345 PF00472 RF-1 domain DB34_04355 PF01618 MotA/TolQ/ExbB proton channel family DB34_04360 PF02472 Biopolymer transport protein ExbD/TolR DB34_04365 PF02472 Biopolymer transport protein ExbD/TolR DB34_04375 PF01098 Cell cycle protein DB34_04380 PF00905 Penicillin binding protein transpeptidase domain DB34_04380 PF03717 Penicillin-binding Protein dimerisation domain DB34_04400 PF00682 HMGL-like DB34_04400 PF08502 LeuA allosteric (dimerisation) domain DB34_04405 PF02628 Cytochrome oxidase assembly protein DB34_04415 PF07690 Major Facilitator Superfamily DB34_04420 PF00512 His Kinase A (phospho-acceptor) domain DB34_04420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DB34_04420 PF00072 Response regulator receiver domain DB34_04420 PF08448 PAS fold DB34_04420 PF13188 PAS domain DB34_04425 PF00156 Phosphoribosyl transferase domain DB34_04430 PF04632 Fusaric acid resistance protein family DB34_04435 PF13660 Domain of unknown function (DUF4147) DB34_04435 PF05161 MOFRL family DB34_04440 PF03167 Uracil DNA glycosylase superfamily DB34_04445 PF00034 Cytochrome c DB34_04445 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DB34_04450 PF13360 PQQ-like domain DB34_04450 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DB34_04460 PF01027 Inhibitor of apoptosis-promoting Bax1 DB34_04470 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DB34_04470 PF06481 COX Aromatic Rich Motif DB34_04475 PF00115 Cytochrome C and Quinol oxidase polypeptide I DB34_04480 PF00510 Cytochrome c oxidase subunit III DB34_04485 PF03626 Prokaryotic Cytochrome C oxidase subunit IV DB34_04490 PF11953 Domain of unknown function (DUF3470) DB34_04490 PF00037 4Fe-4S binding domain DB34_04500 PF02789 Cytosol aminopeptidase family, N-terminal domain DB34_04500 PF00883 Cytosol aminopeptidase family, catalytic domain DB34_04515 PF00953 Glycosyl transferase family 4 DB34_04520 PF02719 Polysaccharide biosynthesis protein DB34_04525 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DB34_04535 PF01979 Amidohydrolase family DB34_04540 PF07992 Pyridine nucleotide-disulphide oxidoreductase DB34_04540 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DB34_04545 PF00970 Oxidoreductase FAD-binding domain DB34_04545 PF00175 Oxidoreductase NAD-binding domain DB34_04560 PF09335 SNARE associated Golgi protein DB34_04565 PF00326 Prolyl oligopeptidase family DB34_04575 PF00390 Malic enzyme, N-terminal domain DB34_04575 PF03949 Malic enzyme, NAD binding domain DB34_04580 PF02357 Transcription termination factor nusG DB34_04580 PF00467 KOW motif DB34_04605 PF00213 ATP synthase delta (OSCP) subunit DB34_04610 PF02874 ATP synthase alpha/beta family, beta-barrel domain DB34_04610 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DB34_04610 PF00306 ATP synthase alpha/beta chain, C terminal domain DB34_04615 PF00231 ATP synthase DB34_04620 PF02874 ATP synthase alpha/beta family, beta-barrel domain DB34_04620 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DB34_04625 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DB34_04630 PF14489 QueF-like protein DB34_04635 PF00570 HRDC domain DB34_04635 PF01612 3'-5' exonuclease DB34_04640 PF00294 pfkB family carbohydrate kinase DB34_04655 PF00324 Amino acid permease DB34_04660 PF12857 TOBE-like domain DB34_04660 PF00005 ABC transporter DB34_04660 PF17850 CysA C-terminal regulatory domain DB34_04665 PF00528 Binding-protein-dependent transport system inner membrane component DB34_04670 PF00528 Binding-protein-dependent transport system inner membrane component DB34_04690 PF02311 AraC-like ligand binding domain DB34_04690 PF12833 Helix-turn-helix domain DB34_04695 PF06751 Ethanolamine ammonia lyase large subunit (EutB) DB34_04700 PF05985 Ethanolamine ammonia-lyase light chain (EutC) DB34_04710 PF00529 HlyD membrane-fusion protein of T1SS DB34_04710 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DB34_04715 PF00873 AcrB/AcrD/AcrF family DB34_04720 PF02321 Outer membrane efflux protein DB34_04725 PF00313 'Cold-shock' DNA-binding domain DB34_04735 PF07715 TonB-dependent Receptor Plug Domain DB34_04735 PF07660 Secretin and TonB N terminus short domain DB34_04735 PF00593 TonB dependent receptor DB34_04790 PF03692 Putative zinc- or iron-chelating domain DB34_04805 PF00005 ABC transporter DB34_04805 PF08402 TOBE domain DB34_04830 PF00529 HlyD membrane-fusion protein of T1SS DB34_04830 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DB34_04835 PF02321 Outer membrane efflux protein DB34_04850 PF13249 Squalene-hopene cyclase N-terminal domain DB34_04850 PF13243 Squalene-hopene cyclase C-terminal domain DB34_04855 PF01593 Flavin containing amine oxidoreductase DB34_04875 PF01370 NAD dependent epimerase/dehydratase family DB34_04885 PF02153 Prephenate dehydrogenase DB34_04895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DB34_04895 PF03466 LysR substrate binding domain DB34_04900 PF00578 AhpC/TSA family DB34_04905 PF02627 Carboxymuconolactone decarboxylase family DB34_04925 PF00719 Inorganic pyrophosphatase DB34_04935 PF00005 ABC transporter DB34_04935 PF12848 ABC transporter DB34_04940 PF13302 Acetyltransferase (GNAT) domain DB34_04955 PF00226 DnaJ domain DB34_04955 PF05099 Tellurite resistance protein TerB DB34_04965 PF08331 Domain of unknown function (DUF1730) DB34_04970 PF01702 Queuine tRNA-ribosyltransferase DB34_04975 PF02547 Queuosine biosynthesis protein DB34_04985 PF01161 Phosphatidylethanolamine-binding protein DB34_05010 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DB34_05010 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DB34_05025 PF08471 Class II vitamin B12-dependent ribonucleotide reductase DB34_05025 PF02867 Ribonucleotide reductase, barrel domain DB34_05050 PF02358 Trehalose-phosphatase DB34_05055 PF00982 Glycosyltransferase family 20 DB34_05060 PF02600 Disulfide bond formation protein DsbB DB34_05075 PF00248 Aldo/keto reductase family DB34_05085 PF04851 Type III restriction enzyme, res subunit DB34_05085 PF00271 Helicase conserved C-terminal domain DB34_05085 PF12344 Ultra-violet resistance protein B DB34_05085 PF17757 UvrB interaction domain DB34_05085 PF02151 UvrB/uvrC motif DB34_05095 PF05193 Peptidase M16 inactive domain DB34_05095 PF00675 Insulinase (Peptidase family M16) DB34_05135 PF02371 Transposase IS116/IS110/IS902 family DB34_05135 PF01548 Transposase DB34_05140 PF02371 Transposase IS116/IS110/IS902 family DB34_05140 PF01548 Transposase DB34_05155 PF00324 Amino acid permease DB34_05160 PF11799 impB/mucB/samB family C-terminal domain DB34_05160 PF00817 impB/mucB/samB family DB34_05175 PF01180 Dihydroorotate dehydrogenase DB34_05185 PF00293 NUDIX domain DB34_05190 PF13277 YmdB-like protein DB34_05195 PF01812 5-formyltetrahydrofolate cyclo-ligase family DB34_05215 PF01791 DeoC/LacD family aldolase DB34_05220 PF02581 Thiamine monophosphate synthase DB34_05240 PF00152 tRNA synthetases class II (D, K and N) DB34_05245 PF04055 Radical SAM superfamily DB34_05245 PF12544 Lysine-2,3-aminomutase DB34_05255 PF00557 Metallopeptidase family M24 DB34_05260 PF07943 Penicillin-binding protein 5, C-terminal domain DB34_05260 PF00768 D-alanyl-D-alanine carboxypeptidase DB34_05265 PF02617 ATP-dependent Clp protease adaptor protein ClpS DB34_05270 PF10431 C-terminal, D2-small domain, of ClpB protein DB34_05270 PF02861 Clp amino terminal domain, pathogenicity island component DB34_05270 PF00004 ATPase family associated with various cellular activities (AAA) DB34_05270 PF07724 AAA domain (Cdc48 subfamily) DB34_05270 PF17871 AAA lid domain DB34_05280 PF03976 Polyphosphate kinase 2 (PPK2) DB34_05285 PF02622 Uncharacterized ACR, COG1678 DB34_05290 PF03668 P-loop ATPase protein family DB34_05300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DB34_05300 PF00512 His Kinase A (phospho-acceptor) domain DB34_05300 PF13755 Sensor N-terminal transmembrane domain DB34_05300 PF00672 HAMP domain DB34_05300 PF13756 Stimulus-sensing domain DB34_05305 PF00072 Response regulator receiver domain DB34_05305 PF00486 Transcriptional regulatory protein, C terminal DB34_05310 PF01025 GrpE DB34_05315 PF00012 Hsp70 protein DB34_05320 PF00226 DnaJ domain DB34_05320 PF00684 DnaJ central domain DB34_05320 PF01556 DnaJ C terminal domain DB34_05325 PF01113 Dihydrodipicolinate reductase, N-terminus DB34_05325 PF05173 Dihydrodipicolinate reductase, C-terminus DB34_05330 PF00438 S-adenosylmethionine synthetase, N-terminal domain DB34_05330 PF02772 S-adenosylmethionine synthetase, central domain DB34_05330 PF02773 S-adenosylmethionine synthetase, C-terminal domain DB34_05335 PF02390 Putative methyltransferase DB34_05340 PF01808 AICARFT/IMPCHase bienzyme DB34_05340 PF02142 MGS-like domain DB34_05355 PF00892 EamA-like transporter family DB34_05360 PF02092 Glycyl-tRNA synthetase beta subunit DB34_05360 PF05746 DALR anticodon binding domain DB34_05365 PF02091 Glycyl-tRNA synthetase alpha subunit DB34_05375 PF01381 Helix-turn-helix DB34_05385 PF00795 Carbon-nitrogen hydrolase DB34_05395 PF01475 Ferric uptake regulator family DB34_05405 PF07497 Rho termination factor, RNA-binding domain DB34_05405 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DB34_05405 PF07498 Rho termination factor, N-terminal domain DB34_05415 PF01544 CorA-like Mg2+ transporter protein DB34_05420 PF00291 Pyridoxal-phosphate dependent enzyme DB34_05425 PF00290 Tryptophan synthase alpha chain DB34_05430 PF00890 FAD binding domain DB34_05430 PF04205 FMN-binding domain DB34_05430 PF03358 NADPH-dependent FMN reductase DB34_05440 PF13393 Histidyl-tRNA synthetase DB34_05445 PF00709 Adenylosuccinate synthetase DB34_05450 PF00486 Transcriptional regulatory protein, C terminal DB34_05450 PF00072 Response regulator receiver domain DB34_05455 PF11808 Phosphate regulon sensor protein PhoR DB34_05455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DB34_05455 PF00512 His Kinase A (phospho-acceptor) domain DB34_05455 PF00989 PAS fold DB34_05460 PF12849 PBP superfamily domain DB34_05480 PF00328 Histidine phosphatase superfamily (branch 2) DB34_05485 PF01595 Cyclin M transmembrane N-terminal domain DB34_05485 PF03471 Transporter associated domain DB34_05485 PF00571 CBS domain DB34_05490 PF08240 Alcohol dehydrogenase GroES-like domain DB34_05490 PF00107 Zinc-binding dehydrogenase DB34_05495 PF00005 ABC transporter DB34_05495 PF00664 ABC transporter transmembrane region DB34_05495 PF03412 Peptidase C39 family DB34_05520 PF01118 Semialdehyde dehydrogenase, NAD binding domain DB34_05525 PF03819 MazG nucleotide pyrophosphohydrolase domain DB34_05535 PF00183 Hsp90 protein DB34_05635 PF01548 Transposase DB34_05635 PF02371 Transposase IS116/IS110/IS902 family DB34_05680 PF01548 Transposase DB34_05680 PF02371 Transposase IS116/IS110/IS902 family DB34_05725 PF06114 IrrE N-terminal-like domain DB34_05725 PF09856 Predicted transcriptional regulator (DUF2083) DB34_05725 PF01381 Helix-turn-helix DB34_05730 PF03972 MmgE/PrpD family DB34_05735 PF00285 Citrate synthase, C-terminal domain DB34_05745 PF16177 Acetyl-coenzyme A synthetase N-terminus DB34_05745 PF13193 AMP-binding enzyme C-terminal domain DB34_05745 PF00501 AMP-binding enzyme DB34_05750 PF07690 Major Facilitator Superfamily DB34_05765 PF02073 Thermophilic metalloprotease (M29) DB34_05780 PF02938 GAD domain DB34_05780 PF01336 OB-fold nucleic acid binding domain DB34_05780 PF00152 tRNA synthetases class II (D, K and N) DB34_05785 PF01212 Beta-eliminating lyase DB34_05790 PF01386 Ribosomal L25p family DB34_05790 PF14693 Ribosomal protein TL5, C-terminal domain DB34_05795 PF01195 Peptidyl-tRNA hydrolase DB34_05800 PF01926 50S ribosome-binding GTPase DB34_05800 PF06071 Protein of unknown function (DUF933) DB34_05805 PF00171 Aldehyde dehydrogenase family DB34_05810 PF01467 Cytidylyltransferase-like DB34_05820 PF02590 Predicted SPOUT methyltransferase DB34_05830 PF03466 LysR substrate binding domain DB34_05830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DB34_05835 PF03306 Alpha-acetolactate decarboxylase DB34_05840 PF00205 Thiamine pyrophosphate enzyme, central domain DB34_05840 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DB34_05840 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DB34_05850 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DB34_05850 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DB34_05850 PF00205 Thiamine pyrophosphate enzyme, central domain DB34_05855 PF02754 Cysteine-rich domain DB34_05860 PF02589 LUD domain DB34_05860 PF13183 4Fe-4S dicluster domain DB34_05860 PF11870 Domain of unknown function (DUF3390) DB34_05870 PF13536 Putative multidrug resistance efflux transporter DB34_05875 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DB34_05880 PF00692 dUTPase DB34_05895 PF04794 YdjC-like protein DB34_05925 PF06463 Molybdenum Cofactor Synthesis C DB34_05925 PF04055 Radical SAM superfamily DB34_05930 PF00571 CBS domain DB34_05930 PF01595 Cyclin M transmembrane N-terminal domain DB34_05930 PF03471 Transporter associated domain DB34_05935 PF01464 Transglycosylase SLT domain DB34_05940 PF03167 Uracil DNA glycosylase superfamily DB34_05950 PF00288 GHMP kinases N terminal domain DB34_05950 PF08544 GHMP kinases C terminal DB34_05960 PF00106 short chain dehydrogenase DB34_05975 PF01554 MatE DB34_05980 PF00005 ABC transporter DB34_05990 PF14572 Phosphoribosyl synthetase-associated domain DB34_05990 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DB34_06035 PF03466 LysR substrate binding domain DB34_06035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DB34_06040 PF00999 Sodium/hydrogen exchanger family DB34_06050 PF07715 TonB-dependent Receptor Plug Domain DB34_06050 PF00593 TonB dependent receptor DB34_06060 PF01032 FecCD transport family DB34_06065 PF00005 ABC transporter DB34_06070 PF02838 Glycosyl hydrolase family 20, domain 2 DB34_06070 PF00728 Glycosyl hydrolase family 20, catalytic domain DB34_06070 PF07691 PA14 domain DB34_06075 PF01869 BadF/BadG/BcrA/BcrD ATPase family DB34_06080 PF13580 SIS domain DB34_06095 PF00875 DNA photolyase DB34_06095 PF03441 FAD binding domain of DNA photolyase DB34_06100 PF01641 SelR domain DB34_06115 PF00155 Aminotransferase class I and II DB34_06125 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DB34_06125 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DB34_06145 PF03466 LysR substrate binding domain DB34_06145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DB34_06155 PF07291 Methylamine utilisation protein MauE DB34_06160 PF00578 AhpC/TSA family DB34_06165 PF02975 Methylamine dehydrogenase, L chain DB34_06180 PF00578 AhpC/TSA family DB34_06190 PF00248 Aldo/keto reductase family DB34_06195 PF03466 LysR substrate binding domain DB34_06195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DB34_06200 PF00171 Aldehyde dehydrogenase family DB34_06205 PF00034 Cytochrome c DB34_06205 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DB34_06210 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DB34_06215 PF00111 2Fe-2S iron-sulfur cluster binding domain DB34_06215 PF01799 [2Fe-2S] binding domain DB34_06275 PF13340 Putative transposase of IS4/5 family (DUF4096) DB34_06415 PF01548 Transposase DB34_06415 PF02371 Transposase IS116/IS110/IS902 family DB34_06480 PF02371 Transposase IS116/IS110/IS902 family DB34_06480 PF01548 Transposase DB34_06505 PF01527 Transposase DB34_06515 PF13007 Transposase C of IS166 homeodomain DB34_06515 PF13005 zinc-finger binding domain of transposase IS66 DB34_06515 PF13817 IS66 C-terminal element DB34_06515 PF03050 Transposase IS66 family DB34_06525 PF01527 Transposase DB34_06535 PF13007 Transposase C of IS166 homeodomain DB34_06535 PF13817 IS66 C-terminal element DB34_06535 PF13005 zinc-finger binding domain of transposase IS66 DB34_06535 PF03050 Transposase IS66 family DB34_06560 PF02325 YGGT family DB34_06645 PF07715 TonB-dependent Receptor Plug Domain DB34_06645 PF00593 TonB dependent receptor DB34_06690 PF02371 Transposase IS116/IS110/IS902 family DB34_06690 PF01548 Transposase DB34_06910 PF00999 Sodium/hydrogen exchanger family DB34_06935 PF02371 Transposase IS116/IS110/IS902 family DB34_06935 PF01548 Transposase DB34_06955 PF00551 Formyl transferase DB34_06960 PF04343 Protein of unknown function, DUF488 DB34_06965 PF02082 Transcriptional regulator DB34_06970 PF00106 short chain dehydrogenase DB34_06975 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DB34_06990 PF03061 Thioesterase superfamily DB34_07000 PF02371 Transposase IS116/IS110/IS902 family DB34_07000 PF01548 Transposase DB34_07040 PF01431 Peptidase family M13 DB34_07040 PF05649 Peptidase family M13 DB34_07060 PF03976 Polyphosphate kinase 2 (PPK2) DB34_07065 PF01384 Phosphate transporter family DB34_07075 PF00676 Dehydrogenase E1 component DB34_07080 PF02780 Transketolase, C-terminal domain DB34_07080 PF02779 Transketolase, pyrimidine binding domain DB34_07085 PF00364 Biotin-requiring enzyme DB34_07085 PF00561 alpha/beta hydrolase fold DB34_07090 PF00011 Hsp20/alpha crystallin family DB34_07105 PF07992 Pyridine nucleotide-disulphide oxidoreductase DB34_07115 PF07683 Cobalamin synthesis protein cobW C-terminal domain DB34_07115 PF02492 CobW/HypB/UreG, nucleotide-binding domain DB34_07120 PF00654 Voltage gated chloride channel DB34_07125 PF16916 Dimerisation domain of Zinc Transporter DB34_07125 PF01545 Cation efflux family DB34_07130 PF01545 Cation efflux family DB34_07140 PF00561 alpha/beta hydrolase fold DB34_07155 PF03169 OPT oligopeptide transporter protein DB34_07185 PF00899 ThiF family DB34_07200 PF02887 Pyruvate kinase, alpha/beta domain DB34_07200 PF00224 Pyruvate kinase, barrel domain DB34_07230 PF01266 FAD dependent oxidoreductase DB34_07240 PF07992 Pyridine nucleotide-disulphide oxidoreductase DB34_07245 PF00180 Isocitrate/isopropylmalate dehydrogenase DB34_07265 PF00155 Aminotransferase class I and II DB34_07270 PF00543 Nitrogen regulatory protein P-II DB34_07275 PF03951 Glutamine synthetase, beta-Grasp domain DB34_07275 PF00120 Glutamine synthetase, catalytic domain DB34_07285 PF01011 PQQ enzyme repeat DB34_07300 PF00009 Elongation factor Tu GTP binding domain DB34_07300 PF06421 GTP-binding protein LepA C-terminus DB34_07300 PF00679 Elongation factor G C-terminus DB34_07300 PF03144 Elongation factor Tu domain 2 DB34_07305 PF00561 alpha/beta hydrolase fold DB34_07310 PF07021 Methionine biosynthesis protein MetW DB34_07310 PF00561 alpha/beta hydrolase fold DB34_07315 PF00271 Helicase conserved C-terminal domain DB34_07315 PF00270 DEAD/DEAH box helicase DB34_07325 PF00484 Carbonic anhydrase DB34_07335 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DB34_07340 PF01192 RNA polymerase Rpb6 DB34_07345 PF02824 TGS domain DB34_07345 PF13291 ACT domain DB34_07345 PF04607 Region found in RelA / SpoT proteins DB34_07350 PF01648 4'-phosphopantetheinyl transferase superfamily DB34_07355 PF10502 Signal peptidase, peptidase S26 DB34_07360 PF00035 Double-stranded RNA binding motif DB34_07360 PF14622 Ribonuclease-III-like DB34_07365 PF01926 50S ribosome-binding GTPase DB34_07365 PF07650 KH domain DB34_07370 PF00696 Amino acid kinase family DB34_07375 PF01765 Ribosome recycling factor DB34_07380 PF01255 Putative undecaprenyl diphosphate synthase DB34_07390 PF13288 DXP reductoisomerase C-terminal domain DB34_07390 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DB34_07390 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DB34_07395 PF17820 PDZ domain DB34_07395 PF02163 Peptidase family M50 DB34_07400 PF07244 Surface antigen variable number repeat DB34_07400 PF01103 Surface antigen DB34_07410 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD DB34_07410 PF00132 Bacterial transferase hexapeptide (six repeats) DB34_07415 PF07977 FabA-like domain DB34_07420 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DB34_07420 PF00132 Bacterial transferase hexapeptide (six repeats) DB34_07425 PF06230 LpxI C-terminal domain DB34_07425 PF17930 LpxI N-terminal domain DB34_07430 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DB34_07440 PF00468 Ribosomal protein L34 DB34_07445 PF00825 Ribonuclease P DB34_07450 PF14849 YidC periplasmic domain DB34_07450 PF02096 60Kd inner membrane protein DB34_07455 PF01926 50S ribosome-binding GTPase DB34_07460 PF00696 Amino acid kinase family DB34_07465 PF00132 Bacterial transferase hexapeptide (six repeats) DB34_07465 PF14602 Hexapeptide repeat of succinyl-transferase DB34_07465 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal DB34_07470 PF01546 Peptidase family M20/M25/M40 DB34_07470 PF07687 Peptidase dimerisation domain DB34_07480 PF01416 tRNA pseudouridine synthase DB34_07485 PF00551 Formyl transferase DB34_07485 PF02911 Formyl transferase, C-terminal domain DB34_07490 PF01327 Polypeptide deformylase DB34_07495 PF00011 Hsp20/alpha crystallin family DB34_07505 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus DB34_07505 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DB34_07520 PF00005 ABC transporter DB34_07535 PF01380 SIS domain DB34_07535 PF00571 CBS domain DB34_07540 PF00570 HRDC domain DB34_07540 PF01612 3'-5' exonuclease DB34_07545 PF00588 SpoU rRNA Methylase family DB34_07545 PF08032 RNA 2'-O ribose methyltransferase substrate binding DB34_07555 PF00561 alpha/beta hydrolase fold DB34_07555 PF00106 short chain dehydrogenase DB34_07560 PF00625 Guanylate kinase DB34_07565 PF00294 pfkB family carbohydrate kinase DB34_07565 PF01467 Cytidylyltransferase-like DB34_07575 PF00772 DnaB-like helicase N terminal domain DB34_07575 PF03796 DnaB-like helicase C terminal domain DB34_07585 PF12795 Mechanosensitive ion channel porin domain DB34_07585 PF00924 Mechanosensitive ion channel DB34_07585 PF12794 Mechanosensitive ion channel inner membrane domain 1 DB34_07590 PF00005 ABC transporter DB34_07595 PF02405 Permease MlaE DB34_07600 PF18073 Rubredoxin metal binding domain DB34_07600 PF06745 KaiC DB34_07625 PF01609 Transposase DDE domain DB34_07635 PF00239 Resolvase, N terminal domain DB34_07635 PF07508 Recombinase DB34_07635 PF13408 Recombinase zinc beta ribbon domain DB34_07650 PF00324 Amino acid permease DB34_07660 PF18327 Proline utilization A proline dehydrogenase N-terminal domain DB34_07660 PF00171 Aldehyde dehydrogenase family DB34_07660 PF14850 DNA-binding domain of Proline dehydrogenase DB34_07660 PF01619 Proline dehydrogenase DB34_07675 PF00501 AMP-binding enzyme DB34_07675 PF13193 AMP-binding enzyme C-terminal domain DB34_07675 PF16177 Acetyl-coenzyme A synthetase N-terminus DB34_07705 PF01923 Cobalamin adenosyltransferase DB34_07720 PF02913 FAD linked oxidases, C-terminal domain DB34_07720 PF01565 FAD binding domain DB34_07730 PF01300 Telomere recombination DB34_07730 PF03481 Putative GTP-binding controlling metal-binding DB34_07735 PF00459 Inositol monophosphatase family DB34_07740 PF00883 Cytosol aminopeptidase family, catalytic domain DB34_07740 PF02789 Cytosol aminopeptidase family, N-terminal domain DB34_07750 PF00248 Aldo/keto reductase family DB34_07755 PF13180 PDZ domain DB34_07760 PF08482 ATP-dependent helicase C-terminal DB34_07760 PF00270 DEAD/DEAH box helicase DB34_07760 PF04408 Helicase associated domain (HA2) DB34_07760 PF00271 Helicase conserved C-terminal domain DB34_07770 PF01430 Hsp33 protein DB34_07780 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DB34_07780 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DB34_07785 PF00202 Aminotransferase class-III DB34_07805 PF02416 mttA/Hcf106 family DB34_07810 PF00596 Class II Aldolase and Adducin N-terminal domain DB34_07815 PF03079 ARD/ARD' family DB34_07825 PF06574 FAD synthetase DB34_07825 PF01687 Riboflavin kinase DB34_07830 PF08264 Anticodon-binding domain of tRNA DB34_07830 PF00133 tRNA synthetases class I (I, L, M and V) DB34_07830 PF06827 Zinc finger found in FPG and IleRS DB34_07835 PF01252 Signal peptidase (SPase) II DB34_07845 PF01119 DNA mismatch repair protein, C-terminal domain DB34_07845 PF08676 MutL C terminal dimerisation domain DB34_07850 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus DB34_07850 PF00361 Proton-conducting membrane transporter DB34_07855 PF00892 EamA-like transporter family DB34_07860 PF00204 DNA gyrase B DB34_07860 PF00986 DNA gyrase B subunit, carboxyl terminus DB34_07860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DB34_07860 PF01751 Toprim domain DB34_07875 PF02082 Transcriptional regulator DB34_07880 PF00291 Pyridoxal-phosphate dependent enzyme DB34_07885 PF00691 OmpA family DB34_07895 PF13180 PDZ domain DB34_07895 PF03572 Peptidase family S41 DB34_07900 PF08206 Ribonuclease B OB domain DB34_07900 PF08461 Ribonuclease R winged-helix domain DB34_07900 PF17876 Cold shock domain DB34_07900 PF00773 RNB domain DB34_07900 PF00575 S1 RNA binding domain DB34_07905 PF01751 Toprim domain DB34_07905 PF13368 Topoisomerase C-terminal repeat DB34_07905 PF01131 DNA topoisomerase DB34_07905 PF01396 Topoisomerase DNA binding C4 zinc finger DB34_07910 PF02481 DNA recombination-mediator protein A DB34_07910 PF17782 DprA winged helix domain DB34_07915 PF02660 Glycerol-3-phosphate acyltransferase DB34_07920 PF01979 Amidohydrolase family DB34_07925 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DB34_07925 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DB34_07930 PF00749 tRNA synthetases class I (E and Q), catalytic domain DB34_07935 PF00753 Metallo-beta-lactamase superfamily DB34_07935 PF13567 Domain of unknown function (DUF4131) DB34_07935 PF03772 Competence protein DB34_07940 PF02627 Carboxymuconolactone decarboxylase family DB34_07945 PF03969 AFG1-like ATPase DB34_07950 PF16078 2-oxoglutarate dehydrogenase N-terminus DB34_07950 PF00676 Dehydrogenase E1 component DB34_07950 PF02779 Transketolase, pyrimidine binding domain DB34_07950 PF16870 2-oxoglutarate dehydrogenase C-terminal DB34_07955 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DB34_07955 PF02817 e3 binding domain DB34_07955 PF00364 Biotin-requiring enzyme DB34_07960 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DB34_07960 PF07992 Pyridine nucleotide-disulphide oxidoreductase DB34_07975 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain DB34_07975 PF05221 S-adenosyl-L-homocysteine hydrolase DB34_07990 PF00753 Metallo-beta-lactamase superfamily DB34_07990 PF16123 Hydroxyacylglutathione hydrolase C-terminus DB34_08020 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DB34_08025 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DB34_08030 PF01066 CDP-alcohol phosphatidyltransferase DB34_08035 PF02666 Phosphatidylserine decarboxylase DB34_08040 PF01411 tRNA synthetases class II (A) DB34_08040 PF02272 DHHA1 domain DB34_08040 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DB34_08050 PF00691 OmpA family DB34_08055 PF01761 3-dehydroquinate synthase DB34_08065 PF02899 Phage integrase, N-terminal SAM-like domain DB34_08065 PF00589 Phage integrase family DB34_08070 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DB34_08075 PF00994 Probable molybdopterin binding domain DB34_08075 PF18146 Damage-inducible protein CinA KH domain DB34_08075 PF02464 Competence-damaged protein DB34_08080 PF01921 tRNA synthetases class I (K) DB34_08095 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ DB34_08100 PF00814 Glycoprotease family DB34_08105 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DB34_08105 PF03900 Porphobilinogen deaminase, C-terminal domain DB34_08115 PF02556 Preprotein translocase subunit SecB DB34_08120 PF00934 PE family DB34_08120 PF00300 Histidine phosphatase superfamily (branch 1) DB34_08130 PF01555 DNA methylase DB34_08135 PF03150 Di-haem cytochrome c peroxidase DB34_08135 PF00034 Cytochrome c DB34_08140 PF01713 Smr domain DB34_08140 PF00488 MutS domain V DB34_08150 PF01218 Coproporphyrinogen III oxidase DB34_08155 PF00033 Cytochrome b/b6/petB DB34_08155 PF02167 Cytochrome C1 family DB34_08155 PF00032 Cytochrome b(C-terminal)/b6/petD DB34_08160 PF02167 Cytochrome C1 family DB34_08160 PF00032 Cytochrome b(C-terminal)/b6/petD DB34_08160 PF00033 Cytochrome b/b6/petB DB34_08165 PF01048 Phosphorylase superfamily DB34_08175 PF13340 Putative transposase of IS4/5 family (DUF4096) DB34_08195 PF00881 Nitroreductase family DB34_08200 PF02423 Ornithine cyclodeaminase/mu-crystallin family DB34_08215 PF01618 MotA/TolQ/ExbB proton channel family DB34_08225 PF02371 Transposase IS116/IS110/IS902 family DB34_08225 PF01548 Transposase DB34_08255 PF02548 Ketopantoate hydroxymethyltransferase DB34_08260 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DB34_08265 PF01022 Bacterial regulatory protein, arsR family DB34_08270 PF08240 Alcohol dehydrogenase GroES-like domain DB34_08275 PF00089 Trypsin DB34_08280 PF16363 GDP-mannose 4,6 dehydratase DB34_08290 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DB34_08290 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DB34_08295 PF00206 Lyase DB34_08295 PF14698 Argininosuccinate lyase C-terminal DB34_08310 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DB34_08310 PF01488 Shikimate / quinate 5-dehydrogenase DB34_08310 PF08501 Shikimate dehydrogenase substrate binding domain DB34_08315 PF01121 Dephospho-CoA kinase DB34_08320 PF00929 Exonuclease DB34_08330 PF13579 Glycosyl transferase 4-like domain DB34_08330 PF00534 Glycosyl transferases group 1 DB34_08340 PF00834 Ribulose-phosphate 3 epimerase family DB34_08345 PF01189 16S rRNA methyltransferase RsmB/F DB34_08345 PF01029 NusB family DB34_08350 PF00551 Formyl transferase DB34_08355 PF02769 AIR synthase related protein, C-terminal domain DB34_08355 PF00586 AIR synthase related protein, N-terminal domain DB34_08365 PF02503 Polyphosphate kinase middle domain DB34_08365 PF13089 Polyphosphate kinase N-terminal domain DB34_08365 PF17941 Polyphosphate kinase C-terminal domain 1 DB34_08365 PF13090 Polyphosphate kinase C-terminal domain 2 DB34_08370 PF02541 Ppx/GppA phosphatase family DB34_08385 PF00005 ABC transporter DB34_08405 PF07885 Ion channel DB34_08405 PF17655 Inward rectifier potassium channel C-terminal domain DB34_08410 PF04632 Fusaric acid resistance protein family DB34_08415 PF04632 Fusaric acid resistance protein family DB34_08435 PF03918 Cytochrome C biogenesis protein DB34_08440 PF08534 Redoxin DB34_08445 PF01578 Cytochrome C assembly protein DB34_08445 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal DB34_08450 PF03100 CcmE DB34_08455 PF01578 Cytochrome C assembly protein DB34_08485 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DB34_08485 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DB34_08490 PF03588 Leucyl/phenylalanyl-tRNA protein transferase DB34_08515 PF03710 Glutamate-ammonia ligase adenylyltransferase DB34_08515 PF08335 GlnD PII-uridylyltransferase DB34_08520 PF00578 AhpC/TSA family DB34_08535 PF13340 Putative transposase of IS4/5 family (DUF4096) DB34_08545 PF13340 Putative transposase of IS4/5 family (DUF4096) DB34_08550 PF00083 Sugar (and other) transporter DB34_08555 PF02646 RmuC family DB34_08560 PF00072 Response regulator receiver domain DB34_08560 PF00486 Transcriptional regulatory protein, C terminal DB34_08565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DB34_08565 PF00512 His Kinase A (phospho-acceptor) domain DB34_08570 PF00873 AcrB/AcrD/AcrF family DB34_08575 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DB34_08580 PF02321 Outer membrane efflux protein DB34_08585 PF03946 Ribosomal protein L11, N-terminal domain DB34_08585 PF00298 Ribosomal protein L11, RNA binding domain DB34_08590 PF00687 Ribosomal protein L1p/L10e family DB34_08595 PF00466 Ribosomal protein L10 DB34_08600 PF16320 Ribosomal protein L7/L12 dimerisation domain DB34_08600 PF00542 Ribosomal protein L7/L12 C-terminal domain DB34_08605 PF04560 RNA polymerase Rpb2, domain 7 DB34_08605 PF04563 RNA polymerase beta subunit DB34_08605 PF04561 RNA polymerase Rpb2, domain 2 DB34_08605 PF04565 RNA polymerase Rpb2, domain 3 DB34_08605 PF10385 RNA polymerase beta subunit external 1 domain DB34_08605 PF00562 RNA polymerase Rpb2, domain 6 DB34_08610 PF00623 RNA polymerase Rpb1, domain 2 DB34_08610 PF04983 RNA polymerase Rpb1, domain 3 DB34_08610 PF04997 RNA polymerase Rpb1, domain 1 DB34_08610 PF04998 RNA polymerase Rpb1, domain 5 DB34_08610 PF05000 RNA polymerase Rpb1, domain 4 DB34_08615 PF00164 Ribosomal protein S12/S23 DB34_08620 PF00177 Ribosomal protein S7p/S5e DB34_08625 PF03143 Elongation factor Tu C-terminal domain DB34_08625 PF03144 Elongation factor Tu domain 2 DB34_08625 PF00009 Elongation factor Tu GTP binding domain DB34_08630 PF00338 Ribosomal protein S10p/S20e DB34_08635 PF00297 Ribosomal protein L3 DB34_08640 PF00573 Ribosomal protein L4/L1 family DB34_08645 PF00276 Ribosomal protein L23 DB34_08650 PF00181 Ribosomal Proteins L2, RNA binding domain DB34_08650 PF03947 Ribosomal Proteins L2, C-terminal domain DB34_08655 PF00203 Ribosomal protein S19 DB34_08660 PF00237 Ribosomal protein L22p/L17e DB34_08665 PF00189 Ribosomal protein S3, C-terminal domain DB34_08665 PF07650 KH domain DB34_08670 PF00252 Ribosomal protein L16p/L10e DB34_08675 PF00831 Ribosomal L29 protein DB34_08680 PF00366 Ribosomal protein S17 DB34_08685 PF00238 Ribosomal protein L14p/L23e DB34_08690 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DB34_08695 PF00281 Ribosomal protein L5 DB34_08695 PF00673 ribosomal L5P family C-terminus DB34_08700 PF00253 Ribosomal protein S14p/S29e DB34_08705 PF00410 Ribosomal protein S8 DB34_08710 PF00347 Ribosomal protein L6 DB34_08715 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DB34_08720 PF00333 Ribosomal protein S5, N-terminal domain DB34_08720 PF03719 Ribosomal protein S5, C-terminal domain DB34_08725 PF00327 Ribosomal protein L30p/L7e DB34_08730 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DB34_08735 PF00344 SecY translocase DB34_08740 PF05191 Adenylate kinase, active site lid DB34_08745 PF00416 Ribosomal protein S13/S18 DB34_08750 PF00411 Ribosomal protein S11 DB34_08755 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DB34_08755 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DB34_08755 PF01000 RNA polymerase Rpb3/RpoA insert domain DB34_08760 PF01196 Ribosomal protein L17 DB34_08770 PF00528 Binding-protein-dependent transport system inner membrane component DB34_08775 PF00005 ABC transporter DB34_08790 PF02321 Outer membrane efflux protein DB34_08795 PF00873 AcrB/AcrD/AcrF family DB34_08800 PF00873 AcrB/AcrD/AcrF family DB34_08805 PF13533 Biotin-lipoyl like DB34_08810 PF07690 Major Facilitator Superfamily DB34_08815 PF05532 CsbD-like DB34_08820 PF01351 Ribonuclease HII DB34_08825 PF01555 DNA methylase DB34_08825 PF18755 Restriction Enzyme Adenine Methylase Associated DB34_08850 PF07726 ATPase family associated with various cellular activities (AAA) DB34_08850 PF17863 AAA lid domain DB34_08860 PF01743 Poly A polymerase head domain DB34_08860 PF12627 Probable RNA and SrmB- binding site of polymerase A DB34_08860 PF13735 tRNA nucleotidyltransferase domain 2 putative DB34_08865 PF00664 ABC transporter transmembrane region DB34_08865 PF00005 ABC transporter DB34_08870 PF13533 Biotin-lipoyl like DB34_08875 PF07690 Major Facilitator Superfamily DB34_08880 PF00293 NUDIX domain DB34_08890 PF03572 Peptidase family S41 DB34_08890 PF13180 PDZ domain DB34_08900 PF01676 Metalloenzyme superfamily DB34_08900 PF06415 BPG-independent PGAM N-terminus (iPGM_N) DB34_08905 PF00291 Pyridoxal-phosphate dependent enzyme DB34_08905 PF13291 ACT domain DB34_08910 PF01272 Transcription elongation factor, GreA/GreB, C-term DB34_08910 PF03449 Transcription elongation factor, N-terminal DB34_08915 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DB34_08915 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DB34_08915 PF02142 MGS-like domain DB34_08920 PF00117 Glutamine amidotransferase class-I DB34_08920 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DB34_08930 PF08275 DNA primase catalytic core, N-terminal domain DB34_08930 PF13662 Toprim domain DB34_08930 PF10410 DnaB-helicase binding domain of primase DB34_08930 PF01807 CHC2 zinc finger DB34_08930 PF08278 DNA primase DnaG DnaB-binding DB34_08935 PF04546 Sigma-70, non-essential region DB34_08935 PF04542 Sigma-70 region 2 DB34_08935 PF00140 Sigma-70 factor, region 1.2 DB34_08935 PF03979 Sigma-70 factor, region 1.1 DB34_08935 PF04545 Sigma-70, region 4 DB34_08935 PF04539 Sigma-70 region 3 DB34_08945 PF01250 Ribosomal protein S6 DB34_08950 PF01084 Ribosomal protein S18 DB34_08955 PF01281 Ribosomal protein L9, N-terminal domain DB34_08955 PF03948 Ribosomal protein L9, C-terminal domain DB34_08965 PF00398 Ribosomal RNA adenine dimethylase DB34_08970 PF09312 SurA N-terminal domain DB34_08970 PF00639 PPIC-type PPIASE domain DB34_08975 PF04453 LPS transport system D DB34_08995 PF00664 ABC transporter transmembrane region DB34_08995 PF00005 ABC transporter DB34_09000 PF00392 Bacterial regulatory proteins, gntR family DB34_09000 PF07729 FCD domain DB34_09005 PF03776 Septum formation topological specificity factor MinE DB34_09010 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DB34_09015 PF03775 Septum formation inhibitor MinC, C-terminal domain DB34_09015 PF05209 Septum formation inhibitor MinC, N-terminal domain DB34_09020 PF00043 Glutathione S-transferase, C-terminal domain DB34_09020 PF13417 Glutathione S-transferase, N-terminal domain DB34_09030 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DB34_09045 PF02559 CarD-like/TRCF domain DB34_09050 PF01062 Bestrophin, RFP-TM, chloride channel DB34_09055 PF00756 Putative esterase DB34_09070 PF00005 ABC transporter DB34_09085 PF00072 Response regulator receiver domain DB34_09085 PF13188 PAS domain DB34_09085 PF00512 His Kinase A (phospho-acceptor) domain DB34_09085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DB34_09085 PF08448 PAS fold DB34_09090 PF00512 His Kinase A (phospho-acceptor) domain DB34_09090 PF08448 PAS fold DB34_09090 PF13188 PAS domain DB34_09090 PF00072 Response regulator receiver domain DB34_09090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DB34_09095 PF00227 Proteasome subunit DB34_09100 PF07724 AAA domain (Cdc48 subfamily) DB34_09100 PF10431 C-terminal, D2-small domain, of ClpB protein DB34_09100 PF00004 ATPase family associated with various cellular activities (AAA) DB34_09105 PF02657 Fe-S metabolism associated domain DB34_09110 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DB34_09115 PF01799 [2Fe-2S] binding domain DB34_09115 PF00111 2Fe-2S iron-sulfur cluster binding domain DB34_09120 PF00034 Cytochrome c DB34_09120 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DB34_09120 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DB34_09125 PF01232 Mannitol dehydrogenase Rossmann domain DB34_09125 PF08125 Mannitol dehydrogenase C-terminal domain DB34_09130 PF01632 Ribosomal protein L35 DB34_09135 PF00453 Ribosomal protein L20 DB34_09140 PF01409 tRNA synthetases class II core domain (F) DB34_09140 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DB34_09145 PF01588 Putative tRNA binding domain DB34_09145 PF03483 B3/4 domain DB34_09145 PF03484 tRNA synthetase B5 domain DB34_09145 PF03147 Ferredoxin-fold anticodon binding domain DB34_09145 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DB34_09150 PF12849 PBP superfamily domain DB34_09155 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DB34_09165 PF00999 Sodium/hydrogen exchanger family DB34_09175 PF01479 S4 domain DB34_09175 PF00163 Ribosomal protein S4/S9 N-terminal domain DB34_09180 PF00009 Elongation factor Tu GTP binding domain DB34_09180 PF03144 Elongation factor Tu domain 2 DB34_09180 PF16658 Class II release factor RF3, C-terminal domain DB34_09190 PF00180 Isocitrate/isopropylmalate dehydrogenase DB34_09190 PF18324 Hypothetical protein TT1725 DB34_09195 PF01321 Creatinase/Prolidase N-terminal domain DB34_09195 PF00557 Metallopeptidase family M24 DB34_09205 PF00580 UvrD/REP helicase N-terminal domain DB34_09205 PF13361 UvrD-like helicase C-terminal domain DB34_09215 PF04002 RadC-like JAB domain DB34_09220 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain DB34_09220 PF02222 ATP-grasp domain DB34_09225 PF00731 AIR carboxylase DB34_09245 PF00011 Hsp20/alpha crystallin family DB34_09250 PF01197 Ribosomal protein L31 DB34_09255 PF01741 Large-conductance mechanosensitive channel, MscL DB34_09265 PF07549 SecD/SecF GG Motif DB34_09265 PF02355 Protein export membrane protein DB34_09270 PF07549 SecD/SecF GG Motif DB34_09270 PF02355 Protein export membrane protein DB34_09280 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DB34_09280 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DB34_09285 PF00317 Ribonucleotide reductase, all-alpha domain DB34_09285 PF03477 ATP cone domain DB34_09285 PF02867 Ribonucleotide reductase, barrel domain DB34_09290 PF00268 Ribonucleotide reductase, small chain DB34_09300 PF00348 Polyprenyl synthetase DB34_09305 PF01177 Asp/Glu/Hydantoin racemase DB34_09310 PF00156 Phosphoribosyl transferase domain DB34_09320 PF00285 Citrate synthase, C-terminal domain DB34_09330 PF01817 Chorismate mutase type II DB34_09330 PF02153 Prephenate dehydrogenase DB34_09340 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain DB34_09340 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain DB34_09350 PF02463 RecF/RecN/SMC N terminal domain DB34_09355 PF13462 Thioredoxin DB34_09360 PF03471 Transporter associated domain DB34_09360 PF00571 CBS domain DB34_09365 PF02130 Uncharacterized protein family UPF0054 DB34_09370 PF02562 PhoH-like protein DB34_09375 PF04055 Radical SAM superfamily DB34_09375 PF01938 TRAM domain DB34_09375 PF00919 Uncharacterized protein family UPF0004 DB34_09385 PF01103 Surface antigen DB34_09385 PF17243 POTRA domain TamA domain 1 DB34_09385 PF07244 Surface antigen variable number repeat DB34_09400 PF01244 Membrane dipeptidase (Peptidase family M19) DB34_09405 PF02151 UvrB/uvrC motif DB34_09405 PF12826 Helix-hairpin-helix motif DB34_09405 PF08459 UvrC Helix-hairpin-helix N-terminal DB34_09405 PF01541 GIY-YIG catalytic domain DB34_09410 PF01066 CDP-alcohol phosphatidyltransferase DB34_09420 PF02597 ThiS family DB34_09425 PF02391 MoaE protein DB34_09430 PF00202 Aminotransferase class-III DB34_09435 PF00155 Aminotransferase class I and II DB34_09445 PF13649 Methyltransferase domain DB34_09450 PF00717 Peptidase S24-like DB34_09450 PF01726 LexA DNA binding domain DB34_09455 PF03453 MoeA N-terminal region (domain I and II) DB34_09455 PF03454 MoeA C-terminal region (domain IV) DB34_09455 PF00994 Probable molybdopterin binding domain DB34_09460 PF00471 Ribosomal protein L33 DB34_09470 PF00113 Enolase, C-terminal TIM barrel domain DB34_09470 PF03952 Enolase, N-terminal domain DB34_09480 PF01266 FAD dependent oxidoreductase DB34_09490 PF05690 Thiazole biosynthesis protein ThiG DB34_09495 PF02581 Thiamine monophosphate synthase DB34_09500 PF00271 Helicase conserved C-terminal domain DB34_09500 PF17191 RecG wedge domain DB34_09500 PF00270 DEAD/DEAH box helicase DB34_09505 PF03937 Flavinator of succinate dehydrogenase DB34_09510 PF03461 TRCF domain DB34_09510 PF02559 CarD-like/TRCF domain DB34_09510 PF00270 DEAD/DEAH box helicase DB34_09510 PF17757 UvrB interaction domain DB34_09510 PF00271 Helicase conserved C-terminal domain DB34_09520 PF13593 SBF-like CPA transporter family (DUF4137) DB34_09525 PF00282 Pyridoxal-dependent decarboxylase conserved domain DB34_09530 PF11775 Cobalamin biosynthesis protein CobT VWA domain DB34_09530 PF06213 Cobalamin biosynthesis protein CobT DB34_09535 PF08406 CbbQ/NirQ/NorQ C-terminal DB34_09535 PF12556 Cobaltochelatase CobS subunit N terminal DB34_09535 PF07728 AAA domain (dynein-related subfamily) DB34_09540 PF00684 DnaJ central domain DB34_09540 PF01556 DnaJ C terminal domain DB34_09540 PF00226 DnaJ domain DB34_09545 PF01722 BolA-like protein DB34_09555 PF03099 Biotin/lipoate A/B protein ligase family DB34_09565 PF00483 Nucleotidyl transferase DB34_09570 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DB34_09570 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DB34_09570 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DB34_09570 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DB34_09575 PF04055 Radical SAM superfamily DB34_09575 PF06463 Molybdenum Cofactor Synthesis C DB34_09580 PF08241 Methyltransferase domain DB34_09585 PF00156 Phosphoribosyl transferase domain DB34_09590 PF00462 Glutaredoxin DB34_09605 PF10282 Lactonase, 7-bladed beta-propeller DB34_09615 PF00696 Amino acid kinase family DB34_09615 PF01842 ACT domain DB34_09615 PF13840 ACT domain DB34_09620 PF03060 Nitronate monooxygenase DB34_09630 PF04551 GcpE protein DB34_09635 PF13393 Histidyl-tRNA synthetase DB34_09635 PF03129 Anticodon binding domain DB34_09640 PF00472 RF-1 domain DB34_09640 PF03462 PCRF domain DB34_09650 PF13847 Methyltransferase domain DB34_09650 PF17827 PrmC N-terminal domain DB34_09670 PF02673 Bacitracin resistance protein BacA DB34_09675 PF13520 Amino acid permease DB34_09685 PF09335 SNARE associated Golgi protein DB34_09690 PF13406 Transglycosylase SLT domain DB34_09695 PF03330 Lytic transglycolase DB34_09695 PF05036 Sporulation related domain DB34_09700 PF00768 D-alanyl-D-alanine carboxypeptidase DB34_09700 PF07943 Penicillin-binding protein 5, C-terminal domain DB34_09705 PF02223 Thymidylate kinase DB34_09715 PF08264 Anticodon-binding domain of tRNA DB34_09715 PF09334 tRNA synthetases class I (M) DB34_09720 PF01026 TatD related DNase DB34_09725 PF12706 Beta-lactamase superfamily domain DB34_09735 PF01243 Pyridoxamine 5'-phosphate oxidase DB34_09735 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region DB34_09745 PF01264 Chorismate synthase DB34_09750 PF02566 OsmC-like protein DB34_09755 PF06039 Malate:quinone oxidoreductase (Mqo) DB34_09765 PF06508 Queuosine biosynthesis protein QueC DB34_09775 PF06968 Biotin and Thiamin Synthesis associated domain DB34_09775 PF04055 Radical SAM superfamily DB34_09785 PF01507 Phosphoadenosine phosphosulfate reductase family DB34_09790 PF01507 Phosphoadenosine phosphosulfate reductase family DB34_09795 PF00009 Elongation factor Tu GTP binding domain DB34_09805 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DB34_09805 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DB34_09815 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) DB34_09820 PF02606 Tetraacyldisaccharide-1-P 4'-kinase DB34_09830 PF00459 Inositol monophosphatase family DB34_09840 PF02618 YceG-like family DB34_09845 PF00109 Beta-ketoacyl synthase, N-terminal domain DB34_09845 PF02801 Beta-ketoacyl synthase, C-terminal domain DB34_09850 PF00550 Phosphopantetheine attachment site DB34_09860 PF00698 Acyl transferase domain DB34_09895 PF00313 'Cold-shock' DNA-binding domain DB34_09900 PF01668 SmpB protein DB34_09905 PF00701 Dihydrodipicolinate synthetase family DB34_09910 PF00800 Prephenate dehydratase DB34_09910 PF01842 ACT domain DB34_09910 PF01817 Chorismate mutase type II DB34_09915 PF02348 Cytidylyltransferase DB34_09920 PF00034 Cytochrome c DB34_09925 PF00459 Inositol monophosphatase family DB34_09930 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DB34_09930 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DB34_09935 PF13335 Magnesium chelatase, subunit ChlI C-terminal DB34_09935 PF01078 Magnesium chelatase, subunit ChlI DB34_09940 PF01053 Cys/Met metabolism PLP-dependent enzyme DB34_09945 PF00581 Rhodanese-like domain DB34_09950 PF01594 AI-2E family transporter DB34_09965 PF02021 Uncharacterised protein family UPF0102 DB34_09975 PF00462 Glutaredoxin DB34_09980 PF01722 BolA-like protein DB34_09985 PF02769 AIR synthase related protein, C-terminal domain DB34_09985 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DB34_09985 PF00586 AIR synthase related protein, N-terminal domain DB34_10000 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase DB34_10005 PF01259 SAICAR synthetase DB34_10010 PF00206 Lyase DB34_10010 PF10397 Adenylosuccinate lyase C-terminus DB34_10015 PF03741 Integral membrane protein TerC family DB34_10020 PF01464 Transglycosylase SLT domain DB34_10020 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain DB34_10030 PF02464 Competence-damaged protein DB34_10045 PF04055 Radical SAM superfamily DB34_10050 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DB34_10050 PF07992 Pyridine nucleotide-disulphide oxidoreductase DB34_10055 PF02817 e3 binding domain DB34_10055 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DB34_10055 PF00364 Biotin-requiring enzyme DB34_10060 PF02780 Transketolase, C-terminal domain DB34_10060 PF02779 Transketolase, pyrimidine binding domain DB34_10060 PF00364 Biotin-requiring enzyme DB34_10065 PF00676 Dehydrogenase E1 component DB34_10070 PF01967 MoaC family DB34_10075 PF00218 Indole-3-glycerol phosphate synthase DB34_10080 PF00591 Glycosyl transferase family, a/b domain DB34_10080 PF02885 Glycosyl transferase family, helical bundle domain DB34_10085 PF00117 Glutamine amidotransferase class-I DB34_10090 PF00425 chorismate binding enzyme DB34_10090 PF04715 Anthranilate synthase component I, N terminal region DB34_10100 PF00121 Triosephosphate isomerase DB34_10110 PF06418 CTP synthase N-terminus DB34_10110 PF00117 Glutamine amidotransferase class-I DB34_10115 PF00793 DAHP synthetase I family DB34_10120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DB34_10120 PF00986 DNA gyrase B subunit, carboxyl terminus DB34_10120 PF01751 Toprim domain DB34_10120 PF00204 DNA gyrase B DB34_10125 PF02463 RecF/RecN/SMC N terminal domain DB34_10130 PF02768 DNA polymerase III beta subunit, C-terminal domain DB34_10130 PF02767 DNA polymerase III beta subunit, central domain DB34_10130 PF00712 DNA polymerase III beta subunit, N-terminal domain DB34_10135 PF00308 Bacterial dnaA protein DB34_10135 PF08299 Bacterial dnaA protein helix-turn-helix DB34_10135 PF11638 DnaA N-terminal domain DB34_10140 PF01649 Ribosomal protein S20 DB34_10145 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DB34_10145 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DB34_10145 PF06827 Zinc finger found in FPG and IleRS DB34_10150 PF01209 ubiE/COQ5 methyltransferase family DB34_10155 PF04127 DNA / pantothenate metabolism flavoprotein DB34_10155 PF02441 Flavoprotein DB34_10160 PF00692 dUTPase DB34_10165 PF00528 Binding-protein-dependent transport system inner membrane component DB34_10170 PF00005 ABC transporter DB34_10175 PF01625 Peptide methionine sulfoxide reductase DB34_10180 PF08264 Anticodon-binding domain of tRNA DB34_10180 PF10458 Valyl tRNA synthetase tRNA binding arm DB34_10180 PF00133 tRNA synthetases class I (I, L, M and V) DB34_10190 PF02321 Outer membrane efflux protein DB34_10225 PF02769 AIR synthase related protein, C-terminal domain DB34_10225 PF00586 AIR synthase related protein, N-terminal domain DB34_10230 PF01029 NusB family DB34_10235 PF03477 ATP cone domain DB34_10245 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DB34_10245 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DB34_10250 PF00230 Major intrinsic protein DB34_10255 PF01266 FAD dependent oxidoreductase DB34_10255 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DB34_10260 PF08220 DeoR-like helix-turn-helix domain DB34_10260 PF00455 DeoR C terminal sensor domain DB34_10265 PF09382 RQC domain DB34_10265 PF00270 DEAD/DEAH box helicase DB34_10265 PF00271 Helicase conserved C-terminal domain DB34_10265 PF00570 HRDC domain DB34_10265 PF16124 RecQ zinc-binding DB34_10275 PF00005 ABC transporter DB34_10275 PF00664 ABC transporter transmembrane region DB34_10280 PF00664 ABC transporter transmembrane region DB34_10280 PF00005 ABC transporter DB34_10285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DB34_10285 PF12282 Signal transduction histidine kinase DB34_10285 PF07568 Histidine kinase DB34_10295 PF08281 Sigma-70, region 4 DB34_10295 PF04542 Sigma-70 region 2 DB34_10300 PF04542 Sigma-70 region 2 DB34_10300 PF08281 Sigma-70, region 4 DB34_10305 PF00072 Response regulator receiver domain DB34_10315 PF01204 Trehalase DB34_10320 PF08240 Alcohol dehydrogenase GroES-like domain DB34_10320 PF00107 Zinc-binding dehydrogenase DB34_10325 PF03831 PhnA domain DB34_10325 PF08274 PhnA Zinc-Ribbon DB34_10340 PF02567 Phenazine biosynthesis-like protein DB34_10345 PF01979 Amidohydrolase family DB34_10360 PF00005 ABC transporter DB34_10375 PF01979 Amidohydrolase family DB34_10385 PF07687 Peptidase dimerisation domain DB34_10385 PF01546 Peptidase family M20/M25/M40 DB34_10390 PF00266 Aminotransferase class-V DB34_10405 PF01425 Amidase DB34_10415 PF13340 Putative transposase of IS4/5 family (DUF4096) DB34_10425 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DB34_10425 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DB34_10430 PF01799 [2Fe-2S] binding domain DB34_10430 PF00111 2Fe-2S iron-sulfur cluster binding domain DB34_10435 PF00860 Permease family DB34_10440 PF00576 HIUase/Transthyretin family DB34_10455 PF13454 FAD-NAD(P)-binding DB34_10475 PF02472 Biopolymer transport protein ExbD/TolR DB34_10485 PF13533 Biotin-lipoyl like DB34_10490 PF00005 ABC transporter DB34_10520 PF13340 Putative transposase of IS4/5 family (DUF4096) DB34_10530 PF03601 Conserved hypothetical protein 698 DB34_10540 PF13243 Squalene-hopene cyclase C-terminal domain DB34_10540 PF13249 Squalene-hopene cyclase N-terminal domain DB34_10545 PF17754 MftR C-terminal domain DB34_10545 PF00440 Bacterial regulatory proteins, tetR family DB34_10560 PF06965 Na+/H+ antiporter 1 DB34_10565 PF00171 Aldehyde dehydrogenase family DB34_10570 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DB34_10575 PF01638 HxlR-like helix-turn-helix DB34_10580 PF18011 C-terminal domain found in long catalases DB34_10580 PF06628 Catalase-related immune-responsive DB34_10580 PF00199 Catalase DB34_10585 PF00472 RF-1 domain DB34_10595 PF06165 Glycosyltransferase family 36 DB34_10595 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain DB34_10595 PF10091 Putative glucoamylase DB34_10600 PF13382 Adenine deaminase C-terminal domain DB34_10600 PF01979 Amidohydrolase family DB34_10605 PF08543 Phosphomethylpyrimidine kinase DB34_10630 PF01548 Transposase DB34_10630 PF02371 Transposase IS116/IS110/IS902 family DB34_10670 PF01609 Transposase DDE domain DB34_10675 PF13340 Putative transposase of IS4/5 family (DUF4096) DB34_10725 PF07859 alpha/beta hydrolase fold DB34_10730 PF13086 AAA domain DB34_10730 PF13195 Protein of unknown function (DUF4011) DB34_10730 PF13195 Protein of unknown function (DUF4011) DB34_10730 PF13087 AAA domain DB34_10730 PF13087 AAA domain DB34_10730 PF13086 AAA domain DB34_10735 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DB34_10735 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DB34_10735 PF02770 Acyl-CoA dehydrogenase, middle domain DB34_10745 PF12464 Maltose acetyltransferase DB34_10745 PF14602 Hexapeptide repeat of succinyl-transferase DB34_10750 PF00593 TonB dependent receptor DB34_10750 PF07715 TonB-dependent Receptor Plug Domain DB34_10755 PF01593 Flavin containing amine oxidoreductase DB34_10760 PF00034 Cytochrome c DB34_10760 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DB34_10770 PF02371 Transposase IS116/IS110/IS902 family DB34_10770 PF01548 Transposase DB34_10795 PF01609 Transposase DDE domain DB34_10810 PF02798 Glutathione S-transferase, N-terminal domain DB34_10830 PF01965 DJ-1/PfpI family DB34_10840 PF01965 DJ-1/PfpI family DB34_10840 PF12833 Helix-turn-helix domain DB34_10845 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain DB34_10845 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain DB34_10885 PF17755 UvrA DNA-binding domain DB34_10890 PF00375 Sodium:dicarboxylate symporter family DB34_10895 PF05724 Thiopurine S-methyltransferase (TPMT) DB34_10900 PF13417 Glutathione S-transferase, N-terminal domain DB34_10900 PF04399 Glutaredoxin 2, C terminal domain DB34_10905 PF07690 Major Facilitator Superfamily DB34_10910 PF01888 CbiD DB34_10915 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DB34_10925 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DB34_10930 PF02571 Precorrin-6x reductase CbiJ/CobK DB34_10935 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DB34_10940 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DB34_10945 PF02570 Precorrin-8X methylmutase DB34_10950 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DB34_10960 PF00206 Lyase DB34_10960 PF10415 Fumarase C C-terminus DB34_10970 PF02954 Bacterial regulatory protein, Fis family DB34_10970 PF06505 Activator of aromatic catabolism DB34_10970 PF02830 V4R domain DB34_10970 PF00158 Sigma-54 interaction domain DB34_10995 PF01011 PQQ enzyme repeat DB34_11015 PF13340 Putative transposase of IS4/5 family (DUF4096) DB34_11040 PF01594 AI-2E family transporter DB34_11050 PF00871 Acetokinase family DB34_11055 PF01515 Phosphate acetyl/butaryl transferase DB34_11070 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DB34_11070 PF07992 Pyridine nucleotide-disulphide oxidoreductase DB34_11085 PF02659 Putative manganese efflux pump DB34_11090 PF14497 Glutathione S-transferase, C-terminal domain DB34_11090 PF02798 Glutathione S-transferase, N-terminal domain DB34_11095 PF02634 FdhD/NarQ family DB34_11100 PF12804 MobA-like NTP transferase domain DB34_11110 PF13340 Putative transposase of IS4/5 family (DUF4096) DB34_11120 PF03453 MoeA N-terminal region (domain I and II) DB34_11120 PF03454 MoeA C-terminal region (domain IV) DB34_11120 PF00994 Probable molybdopterin binding domain DB34_11125 PF04216 Protein involved in formate dehydrogenase formation DB34_11130 PF01292 Prokaryotic cytochrome b561 DB34_11135 PF13247 4Fe-4S dicluster domain DB34_11135 PF09163 Formate dehydrogenase N, transmembrane DB34_11140 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DB34_11140 PF01568 Molydopterin dinucleotide binding domain DB34_11140 PF00384 Molybdopterin oxidoreductase DB34_11150 PF02541 Ppx/GppA phosphatase family DB34_11155 PF01728 FtsJ-like methyltransferase DB34_11160 PF00480 ROK family DB34_11165 PF01206 Sulfurtransferase TusA DB34_11170 PF02609 Exonuclease VII small subunit DB34_11175 PF00348 Polyprenyl synthetase DB34_11180 PF02780 Transketolase, C-terminal domain DB34_11180 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DB34_11180 PF02779 Transketolase, pyrimidine binding domain DB34_11185 PF01479 S4 domain DB34_11185 PF01728 FtsJ-like methyltransferase DB34_11195 PF04055 Radical SAM superfamily DB34_11200 PF00764 Arginosuccinate synthase DB34_11205 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DB34_11205 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DB34_11215 PF00579 tRNA synthetases class I (W and Y) DB34_11235 PF01799 [2Fe-2S] binding domain DB34_11235 PF00111 2Fe-2S iron-sulfur cluster binding domain DB34_11240 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DB34_11240 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DB34_11250 PF01566 Natural resistance-associated macrophage protein DB34_11425 PF13340 Putative transposase of IS4/5 family (DUF4096) DB34_11525 PF17288 Terminase RNAseH like domain DB34_11525 PF04466 Phage terminase large subunit DB34_11610 PF00436 Single-strand binding protein family DB34_11630 PF01381 Helix-turn-helix DB34_11685 PF01609 Transposase DDE domain DB34_11710 PF02899 Phage integrase, N-terminal SAM-like domain DB34_11710 PF00589 Phage integrase family DB34_11720 PF00486 Transcriptional regulatory protein, C terminal DB34_11720 PF00072 Response regulator receiver domain DB34_11735 PF01189 16S rRNA methyltransferase RsmB/F DB34_11735 PF01029 NusB family DB34_11740 PF00478 IMP dehydrogenase / GMP reductase domain DB34_11740 PF00571 CBS domain DB34_11745 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DB34_11755 PF00528 Binding-protein-dependent transport system inner membrane component DB34_11760 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DB34_11760 PF00005 ABC transporter DB34_11765 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DB34_11765 PF00005 ABC transporter DB34_11770 PF03060 Nitronate monooxygenase DB34_11775 PF01569 PAP2 superfamily DB34_11790 PF04185 Phosphoesterase family DB34_11790 PF05506 Domain of unknown function (DUF756) DB34_11800 PF01548 Transposase DB34_11800 PF02371 Transposase IS116/IS110/IS902 family DB34_11810 PF01609 Transposase DDE domain DB34_11835 PF01548 Transposase DB34_11835 PF02371 Transposase IS116/IS110/IS902 family DB34_11855 PF03551 Transcriptional regulator PadR-like family DB34_11865 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DB34_11865 PF00529 HlyD membrane-fusion protein of T1SS DB34_11870 PF04632 Fusaric acid resistance protein family DB34_11880 PF02310 B12 binding domain DB34_11880 PF13282 Domain of unknown function (DUF4070) DB34_11880 PF04055 Radical SAM superfamily DB34_11890 PF07715 TonB-dependent Receptor Plug Domain DB34_11890 PF00593 TonB dependent receptor DB34_11895 PF05552 Conserved TM helix DB34_11895 PF00924 Mechanosensitive ion channel DB34_11900 PF07995 Glucose / Sorbosone dehydrogenase DB34_11910 PF02322 Cytochrome bd terminal oxidase subunit II DB34_11915 PF01654 Cytochrome bd terminal oxidase subunit I DB34_11920 PF00664 ABC transporter transmembrane region DB34_11920 PF00005 ABC transporter DB34_11925 PF00664 ABC transporter transmembrane region DB34_11925 PF00005 ABC transporter DB34_11930 PF13340 Putative transposase of IS4/5 family (DUF4096) DB34_11940 PF18331 PKHD-type hydroxylase C-terminal domain DB34_11940 PF13640 2OG-Fe(II) oxygenase superfamily DB34_11945 PF07715 TonB-dependent Receptor Plug Domain DB34_11945 PF00593 TonB dependent receptor DB34_11970 PF17763 Glutaminase/Asparaginase C-terminal domain DB34_11970 PF00710 Asparaginase, N-terminal DB34_11975 PF00155 Aminotransferase class I and II DB34_11980 PF06826 Predicted Permease Membrane Region DB34_11980 PF02080 TrkA-C domain DB34_12010 PF12848 ABC transporter DB34_12010 PF00005 ABC transporter DB34_12015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DB34_12015 PF03466 LysR substrate binding domain DB34_12030 PF01548 Transposase DB34_12030 PF02371 Transposase IS116/IS110/IS902 family DB34_12050 PF02371 Transposase IS116/IS110/IS902 family DB34_12050 PF01548 Transposase DB34_12055 PF02371 Transposase IS116/IS110/IS902 family DB34_12055 PF01548 Transposase DB34_12065 PF08240 Alcohol dehydrogenase GroES-like domain DB34_12065 PF00107 Zinc-binding dehydrogenase DB34_12080 PF07690 Major Facilitator Superfamily DB34_12085 PF01609 Transposase DDE domain DB34_12090 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DB34_12100 PF03466 LysR substrate binding domain DB34_12100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DB34_12105 PF00528 Binding-protein-dependent transport system inner membrane component DB34_12110 PF00005 ABC transporter DB34_12125 PF14226 non-haem dioxygenase in morphine synthesis N-terminal DB34_12125 PF03171 2OG-Fe(II) oxygenase superfamily DB34_12130 PF00596 Class II Aldolase and Adducin N-terminal domain DB34_12175 PF00501 AMP-binding enzyme DB34_12185 PF00155 Aminotransferase class I and II DB34_12200 PF00149 Calcineurin-like phosphoesterase DB34_12225 PF13419 Haloacid dehalogenase-like hydrolase DB34_12230 PF00132 Bacterial transferase hexapeptide (six repeats) DB34_12230 PF12804 MobA-like NTP transferase domain DB34_12230 PF14602 Hexapeptide repeat of succinyl-transferase DB34_12235 PF01380 SIS domain DB34_12250 PF00255 Glutathione peroxidase DB34_12255 PF00005 ABC transporter DB34_12260 PF12704 MacB-like periplasmic core domain DB34_12260 PF02687 FtsX-like permease family DB34_12265 PF03129 Anticodon binding domain DB34_12265 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DB34_12270 PF12706 Beta-lactamase superfamily domain DB34_12270 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DB34_12270 PF17770 Ribonuclease J C-terminal domain DB34_12275 PF03309 Type III pantothenate kinase DB34_12280 PF03099 Biotin/lipoate A/B protein ligase family DB34_12280 PF02237 Biotin protein ligase C terminal domain DB34_12285 PF00361 Proton-conducting membrane transporter DB34_12290 PF00361 Proton-conducting membrane transporter DB34_12290 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DB34_12295 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DB34_12300 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DB34_12305 PF12838 4Fe-4S dicluster domain DB34_12310 PF00146 NADH dehydrogenase DB34_12315 PF00384 Molybdopterin oxidoreductase DB34_12315 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal DB34_12315 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DB34_12320 PF10531 SLBB domain DB34_12320 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DB34_12320 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DB34_12330 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DB34_12335 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DB34_12340 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DB34_12345 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DB34_12365 PF00216 Bacterial DNA-binding protein DB34_12370 PF00004 ATPase family associated with various cellular activities (AAA) DB34_12370 PF05362 Lon protease (S16) C-terminal proteolytic domain DB34_12370 PF02190 ATP-dependent protease La (LON) substrate-binding domain DB34_12375 PF06689 ClpX C4-type zinc finger DB34_12375 PF07724 AAA domain (Cdc48 subfamily) DB34_12375 PF10431 C-terminal, D2-small domain, of ClpB protein DB34_12380 PF00574 Clp protease DB34_12385 PF05697 Bacterial trigger factor protein (TF) DB34_12385 PF05698 Bacterial trigger factor protein (TF) C-terminus DB34_12385 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DB34_12395 PF03853 YjeF-related protein N-terminus DB34_12395 PF01256 Carbohydrate kinase DB34_12405 PF00270 DEAD/DEAH box helicase DB34_12405 PF00271 Helicase conserved C-terminal domain DB34_12410 PF05958 tRNA (Uracil-5-)-methyltransferase DB34_12415 PF01521 Iron-sulphur cluster biosynthesis DB34_12420 PF01883 Iron-sulfur cluster assembly protein DB34_12430 PF00266 Aminotransferase class-V DB34_12435 PF01458 Uncharacterized protein family (UPF0051) DB34_12440 PF00005 ABC transporter DB34_12445 PF01458 Uncharacterized protein family (UPF0051) DB34_12450 PF02082 Transcriptional regulator DB34_12455 PF04286 Protein of unknown function (DUF445) DB34_12460 PF00311 Phosphoenolpyruvate carboxylase DB34_12470 PF03144 Elongation factor Tu domain 2 DB34_12470 PF00009 Elongation factor Tu GTP binding domain DB34_12470 PF03764 Elongation factor G, domain IV DB34_12470 PF14492 Elongation Factor G, domain II DB34_12470 PF00679 Elongation factor G C-terminus DB34_12475 PF00830 Ribosomal L28 family DB34_12485 PF00005 ABC transporter DB34_12485 PF00664 ABC transporter transmembrane region DB34_12495 PF08335 GlnD PII-uridylyltransferase DB34_12495 PF01966 HD domain DB34_12500 PF00488 MutS domain V DB34_12500 PF05190 MutS family domain IV DB34_12500 PF05192 MutS domain III DB34_12500 PF05188 MutS domain II DB34_12500 PF01624 MutS domain I DB34_12510 PF02074 Carboxypeptidase Taq (M32) metallopeptidase DB34_12520 PF14821 Threonine synthase N terminus DB34_12520 PF00291 Pyridoxal-phosphate dependent enzyme DB34_12525 PF00675 Insulinase (Peptidase family M16) DB34_12525 PF05193 Peptidase M16 inactive domain DB34_12530 PF01523 Putative modulator of DNA gyrase DB34_12545 PF01040 UbiA prenyltransferase family DB34_12550 PF00115 Cytochrome C and Quinol oxidase polypeptide I DB34_12555 PF01209 ubiE/COQ5 methyltransferase family DB34_12560 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain DB34_12560 PF02951 Prokaryotic glutathione synthetase, N-terminal domain DB34_12570 PF00535 Glycosyl transferase family 2 DB34_12575 PF01037 Lrp/AsnC ligand binding domain DB34_12580 PF07992 Pyridine nucleotide-disulphide oxidoreductase DB34_12585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DB34_12585 PF03466 LysR substrate binding domain DB34_12590 PF05443 ROS/MUCR transcriptional regulator protein DB34_12595 PF00216 Bacterial DNA-binding protein DB34_12605 PF03023 Lipid II flippase MurJ DB34_12610 PF01594 AI-2E family transporter DB34_12620 PF13411 MerR HTH family regulatory protein DB34_12625 PF00216 Bacterial DNA-binding protein DB34_12630 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DB34_12630 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DB34_12635 PF02504 Fatty acid synthesis protein DB34_12640 PF01783 Ribosomal L32p protein family DB34_12655 PF00512 His Kinase A (phospho-acceptor) domain DB34_12655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DB34_12655 PF00672 HAMP domain DB34_12660 PF00486 Transcriptional regulatory protein, C terminal DB34_12660 PF00072 Response regulator receiver domain DB34_12665 PF12802 MarR family DB34_12675 PF01327 Polypeptide deformylase DB34_12680 PF01165 Ribosomal protein S21 DB34_12685 PF00180 Isocitrate/isopropylmalate dehydrogenase DB34_12690 PF00694 Aconitase C-terminal domain DB34_12695 PF00330 Aconitase family (aconitate hydratase) DB34_12700 PF01245 Ribosomal protein L19 DB34_12705 PF01746 tRNA (Guanine-1)-methyltransferase DB34_12710 PF01782 RimM N-terminal domain DB34_12715 PF00886 Ribosomal protein S16 DB34_12720 PF02978 Signal peptide binding domain DB34_12720 PF02881 SRP54-type protein, helical bundle domain DB34_12720 PF00448 SRP54-type protein, GTPase domain DB34_12740 PF01479 S4 domain DB34_12740 PF00849 RNA pseudouridylate synthase DB34_12745 PF00004 ATPase family associated with various cellular activities (AAA) DB34_12745 PF16193 AAA C-terminal domain DB34_12745 PF12002 MgsA AAA+ ATPase C terminal DB34_12755 PF01040 UbiA prenyltransferase family DB34_12760 PF04452 RNA methyltransferase DB34_12765 PF04107 Glutamate-cysteine ligase family 2(GCS2) DB34_12770 PF07690 Major Facilitator Superfamily DB34_12775 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DB34_12775 PF01926 50S ribosome-binding GTPase DB34_12780 PF13360 PQQ-like domain DB34_12800 PF13439 Glycosyltransferase Family 4 DB34_12800 PF00534 Glycosyl transferases group 1 DB34_12805 PF00733 Asparagine synthase DB34_12805 PF13537 Glutamine amidotransferase domain DB34_12815 PF01502 Phosphoribosyl-AMP cyclohydrolase DB34_12820 PF02684 Lipid-A-disaccharide synthetase DB34_12825 PF01740 STAS domain DB34_12825 PF00916 Sulfate permease family DB34_12840 PF01794 Ferric reductase like transmembrane component DB34_12855 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DB34_12855 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DB34_12860 PF17871 AAA lid domain DB34_12860 PF10431 C-terminal, D2-small domain, of ClpB protein DB34_12860 PF02861 Clp amino terminal domain, pathogenicity island component DB34_12860 PF07724 AAA domain (Cdc48 subfamily) DB34_12860 PF00004 ATPase family associated with various cellular activities (AAA) DB34_12865 PF00293 NUDIX domain DB34_12870 PF16360 GTP-binding GTPase Middle Region DB34_12870 PF13167 GTP-binding GTPase N-terminal DB34_12870 PF01926 50S ribosome-binding GTPase DB34_12875 PF17209 Hfq protein DB34_12880 PF00158 Sigma-54 interaction domain DB34_12880 PF00072 Response regulator receiver domain DB34_12880 PF02954 Bacterial regulatory protein, Fis family DB34_12885 PF00672 HAMP domain DB34_12885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DB34_12890 PF02954 Bacterial regulatory protein, Fis family DB34_12890 PF00072 Response regulator receiver domain DB34_12890 PF00158 Sigma-54 interaction domain DB34_12895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DB34_12895 PF00512 His Kinase A (phospho-acceptor) domain DB34_12895 PF00989 PAS fold DB34_12900 PF01207 Dihydrouridine synthase (Dus) DB34_12905 PF02542 YgbB family DB34_12905 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DB34_12910 PF00535 Glycosyl transferase family 2 DB34_12925 PF03275 UDP-galactopyranose mutase DB34_12965 PF00156 Phosphoribosyl transferase domain DB34_12990 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DB34_12990 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DB34_12990 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DB34_13000 PF00543 Nitrogen regulatory protein P-II DB34_13005 PF00132 Bacterial transferase hexapeptide (six repeats) DB34_13005 PF06426 Serine acetyltransferase, N-terminal DB34_13010 PF01494 FAD binding domain DB34_13015 PF09335 SNARE associated Golgi protein DB34_13060 PF02371 Transposase IS116/IS110/IS902 family DB34_13060 PF01548 Transposase DB34_13140 PF07409 Phage protein GP46 DB34_13175 PF17482 Phage tail sheath C-terminal domain DB34_13175 PF04984 Phage tail sheath protein subtilisin-like domain DB34_13215 PF01343 Peptidase family S49 DB34_13260 PF02899 Phage integrase, N-terminal SAM-like domain DB34_13260 PF00589 Phage integrase family DB34_13355 PF01381 Helix-turn-helix DB34_13395 PF13356 Arm DNA-binding domain DB34_13395 PF00589 Phage integrase family DB34_13405 PF08207 Elongation factor P (EF-P) KOW-like domain DB34_13405 PF09285 Elongation factor P, C-terminal DB34_13405 PF01132 Elongation factor P (EF-P) OB domain DB34_13410 PF00459 Inositol monophosphatase family DB34_13415 PF04851 Type III restriction enzyme, res subunit DB34_13415 PF13307 Helicase C-terminal domain DB34_13420 PF00313 'Cold-shock' DNA-binding domain DB34_13425 PF01738 Dienelactone hydrolase family DB34_13430 PF00166 Chaperonin 10 Kd subunit DB34_13435 PF00118 TCP-1/cpn60 chaperonin family DB34_13515 PF01548 Transposase DB34_13515 PF02371 Transposase IS116/IS110/IS902 family DB34_13540 PF06114 IrrE N-terminal-like domain DB34_13550 PF01609 Transposase DDE domain DB34_13560 PF13340 Putative transposase of IS4/5 family (DUF4096) DB34_13570 PF01548 Transposase DB34_13570 PF02371 Transposase IS116/IS110/IS902 family DB34_13590 PF01609 Transposase DDE domain DB34_13605 PF01609 Transposase DDE domain DB34_13630 PF13340 Putative transposase of IS4/5 family (DUF4096) DB34_13660 PF13361 UvrD-like helicase C-terminal domain DB34_13660 PF00580 UvrD/REP helicase N-terminal domain DB34_13665 PF13538 UvrD-like helicase C-terminal domain DB34_13665 PF14490 Helix-hairpin-helix containing domain DB34_13665 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain DB34_13680 PF13361 UvrD-like helicase C-terminal domain DB34_13680 PF00580 UvrD/REP helicase N-terminal domain DB34_13685 PF02371 Transposase IS116/IS110/IS902 family DB34_13685 PF01548 Transposase DB34_13690 PF02371 Transposase IS116/IS110/IS902 family DB34_13690 PF01548 Transposase DB34_13695 PF02371 Transposase IS116/IS110/IS902 family DB34_13695 PF01548 Transposase DB34_13705 PF01609 Transposase DDE domain DB34_13795 PF13340 Putative transposase of IS4/5 family (DUF4096)