DB34_02360 d4c250475a0591a4774a42c4ed4936c3 244 Gene3D G3DSA:2.60.120.10 10 241 1.1E-36 T 11-10-2018 IPR014710 RmlC-like jelly roll fold DB34_02360 d4c250475a0591a4774a42c4ed4936c3 244 Gene3D G3DSA:2.60.120.10 11 135 1.1E-36 T 11-10-2018 IPR014710 RmlC-like jelly roll fold DB34_02360 d4c250475a0591a4774a42c4ed4936c3 244 SUPERFAMILY SSF51182 1 241 4.45E-26 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily DB34_11140 0d2a90bcd60ca532f5cd4c326fa63e66 803 Gene3D G3DSA:3.40.228.10 1 274 6.9E-71 T 11-10-2018 DB34_11140 0d2a90bcd60ca532f5cd4c326fa63e66 803 Gene3D G3DSA:2.40.40.20 628 803 2.1E-66 T 11-10-2018 DB34_11140 0d2a90bcd60ca532f5cd4c326fa63e66 803 TIGRFAM TIGR01553 formate-DH-alph: formate dehydrogenase-N alpha subunit 1 802 0.0 T 11-10-2018 IPR006443 Formate dehydrogenase-N, alpha subunit GO:0008863|GO:0009055|GO:0043546|GO:0045333|GO:0047111 DB34_11140 0d2a90bcd60ca532f5cd4c326fa63e66 803 Pfam PF01568 Molydopterin dinucleotide binding domain 690 796 7.5E-15 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 DB34_11140 0d2a90bcd60ca532f5cd4c326fa63e66 803 Gene3D G3DSA:3.40.50.740 303 471 3.9E-55 T 11-10-2018 DB34_11140 0d2a90bcd60ca532f5cd4c326fa63e66 803 SUPERFAMILY SSF53706 1 638 1.96E-218 T 11-10-2018 DB34_11140 0d2a90bcd60ca532f5cd4c326fa63e66 803 Gene3D G3DSA:3.40.228.10 472 627 6.5E-27 T 11-10-2018 DB34_11140 0d2a90bcd60ca532f5cd4c326fa63e66 803 Pfam PF00384 Molybdopterin oxidoreductase 2 444 1.6E-24 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_11140 0d2a90bcd60ca532f5cd4c326fa63e66 803 SUPERFAMILY SSF50692 629 803 2.69E-39 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily DB34_02075 db7368fc070f6b72c9698dadff99cc64 356 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 4 351 56.4 T 11-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 DB34_02075 db7368fc070f6b72c9698dadff99cc64 356 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 9 350 1.2E-89 T 11-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 DB34_02075 db7368fc070f6b72c9698dadff99cc64 356 Gene3D G3DSA:3.40.640.10 38 259 1.2E-106 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB34_02075 db7368fc070f6b72c9698dadff99cc64 356 Gene3D G3DSA:3.90.1150.10 20 340 1.2E-106 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB34_02075 db7368fc070f6b72c9698dadff99cc64 356 SUPERFAMILY SSF53383 5 351 1.62E-76 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB34_02075 db7368fc070f6b72c9698dadff99cc64 356 Pfam PF00155 Aminotransferase class I and II 24 347 5.2E-61 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DB34_02075 db7368fc070f6b72c9698dadff99cc64 356 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 207 216 - T 11-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 DB34_07905 e6ca2558b58200ee33a87466fd04dd90 897 SUPERFAMILY SSF56712 2 612 1.15E-182 T 11-10-2018 IPR023405 DNA topoisomerase, type IA, core domain DB34_07905 e6ca2558b58200ee33a87466fd04dd90 897 SMART SM00493 2 102 6.1E-24 T 11-10-2018 IPR006171 TOPRIM domain DB34_07905 e6ca2558b58200ee33a87466fd04dd90 897 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 286 308 - T 11-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 DB34_07905 e6ca2558b58200ee33a87466fd04dd90 897 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 76 89 4.4E-34 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DB34_07905 e6ca2558b58200ee33a87466fd04dd90 897 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 299 308 4.4E-34 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DB34_07905 e6ca2558b58200ee33a87466fd04dd90 897 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 485 499 4.4E-34 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DB34_07905 e6ca2558b58200ee33a87466fd04dd90 897 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 377 393 4.4E-34 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DB34_07905 e6ca2558b58200ee33a87466fd04dd90 897 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 165 183 4.4E-34 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DB34_07905 e6ca2558b58200ee33a87466fd04dd90 897 SUPERFAMILY SSF57783 604 641 8.33E-9 T 11-10-2018 DB34_07905 e6ca2558b58200ee33a87466fd04dd90 897 Pfam PF01131 DNA topoisomerase 131 559 4.6E-121 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DB34_07905 e6ca2558b58200ee33a87466fd04dd90 897 SMART SM00437 249 522 1.2E-113 T 11-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 DB34_07905 e6ca2558b58200ee33a87466fd04dd90 897 Gene3D G3DSA:1.10.460.10 141 562 9.2E-165 T 11-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 DB34_07905 e6ca2558b58200ee33a87466fd04dd90 897 Gene3D G3DSA:3.40.50.140 1 137 1.2E-45 T 11-10-2018 DB34_07905 e6ca2558b58200ee33a87466fd04dd90 897 Gene3D G3DSA:1.10.290.10 257 392 9.2E-165 T 11-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 DB34_07905 e6ca2558b58200ee33a87466fd04dd90 897 Gene3D G3DSA:2.70.20.10 187 469 9.2E-165 T 11-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 DB34_07905 e6ca2558b58200ee33a87466fd04dd90 897 Pfam PF01751 Toprim domain 4 116 3.0E-24 T 11-10-2018 IPR006171 TOPRIM domain DB34_07905 e6ca2558b58200ee33a87466fd04dd90 897 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 605 639 1.7E-14 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 DB34_07905 e6ca2558b58200ee33a87466fd04dd90 897 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 639 2.4E-234 T 11-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 DB34_07905 e6ca2558b58200ee33a87466fd04dd90 897 Hamap MF_00952 DNA topoisomerase 1 [topA]. 2 747 52.722 T 11-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 DB34_07905 e6ca2558b58200ee33a87466fd04dd90 897 Pfam PF13368 Topoisomerase C-terminal repeat 726 775 2.7E-17 T 11-10-2018 IPR025589 Topoisomerase C-terminal repeat DB34_07905 e6ca2558b58200ee33a87466fd04dd90 897 Pfam PF13368 Topoisomerase C-terminal repeat 784 834 9.1E-20 T 11-10-2018 IPR025589 Topoisomerase C-terminal repeat DB34_07905 e6ca2558b58200ee33a87466fd04dd90 897 Pfam PF13368 Topoisomerase C-terminal repeat 662 721 1.5E-13 T 11-10-2018 IPR025589 Topoisomerase C-terminal repeat DB34_07905 e6ca2558b58200ee33a87466fd04dd90 897 SMART SM00436 107 195 1.1E-42 T 11-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 DB34_06125 5729f66950515cacd07d7b006aa65b41 323 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 3 310 32.66 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DB34_06125 5729f66950515cacd07d7b006aa65b41 323 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 176 197 - T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DB34_06125 5729f66950515cacd07d7b006aa65b41 323 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 5 147 2.6E-23 T 11-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DB34_06125 5729f66950515cacd07d7b006aa65b41 323 SUPERFAMILY SSF51735 2 168 2.04E-31 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily DB34_06125 5729f66950515cacd07d7b006aa65b41 323 SUPERFAMILY SSF48179 168 319 1.62E-45 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DB34_06125 5729f66950515cacd07d7b006aa65b41 323 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 7 24 6.7E-35 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DB34_06125 5729f66950515cacd07d7b006aa65b41 323 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 121 141 6.7E-35 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DB34_06125 5729f66950515cacd07d7b006aa65b41 323 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 186 210 6.7E-35 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DB34_06125 5729f66950515cacd07d7b006aa65b41 323 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 226 243 6.7E-35 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DB34_06125 5729f66950515cacd07d7b006aa65b41 323 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 161 185 6.7E-35 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DB34_06125 5729f66950515cacd07d7b006aa65b41 323 PIRSF PIRSF000114 1 320 3.0E-76 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DB34_06125 5729f66950515cacd07d7b006aa65b41 323 Gene3D G3DSA:1.10.1040.10 177 323 8.8E-43 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DB34_06125 5729f66950515cacd07d7b006aa65b41 323 Gene3D G3DSA:3.40.50.720 1 175 2.0E-39 T 11-10-2018 DB34_06125 5729f66950515cacd07d7b006aa65b41 323 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 168 304 6.6E-43 T 11-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DB34_12705 4a7241c19e98419846de2f3ce47b7ffb 250 PIRSF PIRSF000386 3 246 2.4E-89 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 DB34_12705 4a7241c19e98419846de2f3ce47b7ffb 250 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 250 102.572 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 DB34_12705 4a7241c19e98419846de2f3ce47b7ffb 250 SUPERFAMILY SSF75217 2 233 2.62E-90 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases DB34_12705 4a7241c19e98419846de2f3ce47b7ffb 250 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 25 221 2.9E-51 T 11-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 DB34_12705 4a7241c19e98419846de2f3ce47b7ffb 250 Gene3D G3DSA:1.10.1270.20 166 248 1.3E-31 T 11-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 DB34_12705 4a7241c19e98419846de2f3ce47b7ffb 250 Gene3D G3DSA:3.40.1280.10 1 165 5.7E-59 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DB34_12705 4a7241c19e98419846de2f3ce47b7ffb 250 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 5 233 6.7E-77 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 DB34_12370 5278449b1aa57f57d41b2731efde0387 840 PIRSF PIRSF001174 38 814 0.0 T 11-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 DB34_12370 5278449b1aa57f57d41b2731efde0387 840 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 609 811 3.5E-96 T 11-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 DB34_12370 5278449b1aa57f57d41b2731efde0387 840 Gene3D G3DSA:1.10.8.60 531 623 6.5E-31 T 11-10-2018 DB34_12370 5278449b1aa57f57d41b2731efde0387 840 SMART SM00382 388 540 2.4E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_12370 5278449b1aa57f57d41b2731efde0387 840 SMART SM00464 50 242 1.1E-71 T 11-10-2018 IPR003111 Lon, substrate-binding domain DB34_12370 5278449b1aa57f57d41b2731efde0387 840 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 715 723 - T 11-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 DB34_12370 5278449b1aa57f57d41b2731efde0387 840 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 392 528 2.3E-20 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DB34_12370 5278449b1aa57f57d41b2731efde0387 840 SUPERFAMILY SSF52540 353 625 4.92E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_12370 5278449b1aa57f57d41b2731efde0387 840 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 742 761 6.4E-55 T 11-10-2018 DB34_12370 5278449b1aa57f57d41b2731efde0387 840 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 396 415 6.4E-55 T 11-10-2018 DB34_12370 5278449b1aa57f57d41b2731efde0387 840 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 712 731 6.4E-55 T 11-10-2018 DB34_12370 5278449b1aa57f57d41b2731efde0387 840 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 765 783 6.4E-55 T 11-10-2018 DB34_12370 5278449b1aa57f57d41b2731efde0387 840 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 634 650 6.4E-55 T 11-10-2018 DB34_12370 5278449b1aa57f57d41b2731efde0387 840 Gene3D G3DSA:3.30.230.10 632 819 2.6E-79 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DB34_12370 5278449b1aa57f57d41b2731efde0387 840 TIGRFAM TIGR00763 lon: endopeptidase La 53 810 1.9E-300 T 11-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 DB34_12370 5278449b1aa57f57d41b2731efde0387 840 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 51 240 6.3E-39 T 11-10-2018 IPR003111 Lon, substrate-binding domain DB34_12370 5278449b1aa57f57d41b2731efde0387 840 Gene3D G3DSA:1.20.58.1480 161 285 3.6E-41 T 11-10-2018 DB34_12370 5278449b1aa57f57d41b2731efde0387 840 Hamap MF_01973 Lon protease [lon]. 51 811 71.922 T 11-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 DB34_12370 5278449b1aa57f57d41b2731efde0387 840 Gene3D G3DSA:2.30.130.40 37 157 5.2E-33 T 11-10-2018 DB34_12370 5278449b1aa57f57d41b2731efde0387 840 SUPERFAMILY SSF88697 51 241 1.71E-46 T 11-10-2018 IPR015947 PUA-like superfamily DB34_12370 5278449b1aa57f57d41b2731efde0387 840 SUPERFAMILY SSF54211 634 809 1.25E-56 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DB34_12370 5278449b1aa57f57d41b2731efde0387 840 Gene3D G3DSA:3.40.50.300 354 530 3.8E-64 T 11-10-2018 DB34_02870 461e460c1298dd542dd47a263863022c 419 SUPERFAMILY SSF51905 1 416 9.58E-58 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_02870 461e460c1298dd542dd47a263863022c 419 Gene3D G3DSA:3.30.9.10 134 362 1.7E-57 T 11-10-2018 DB34_02870 461e460c1298dd542dd47a263863022c 419 SUPERFAMILY SSF54373 270 360 1.57E-15 T 11-10-2018 DB34_02870 461e460c1298dd542dd47a263863022c 419 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 411 48.428 T 11-10-2018 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 DB34_02870 461e460c1298dd542dd47a263863022c 419 Gene3D G3DSA:3.50.50.60 103 406 1.7E-57 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_02870 461e460c1298dd542dd47a263863022c 419 Pfam PF01266 FAD dependent oxidoreductase 2 398 3.5E-74 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DB34_02870 461e460c1298dd542dd47a263863022c 419 Gene3D G3DSA:3.50.50.60 1 72 4.0E-12 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_06160 8613d03ef3d69329b5dcfa7b4edb9568 201 SUPERFAMILY SSF52833 45 166 2.39E-12 T 11-10-2018 IPR036249 Thioredoxin-like superfamily DB34_06160 8613d03ef3d69329b5dcfa7b4edb9568 201 Gene3D G3DSA:3.40.30.10 48 178 1.4E-11 T 11-10-2018 DB34_10505 54c389bdfd267f5a40b8612ad2ab4259 286 Gene3D G3DSA:3.40.190.290 81 285 4.0E-39 T 11-10-2018 DB34_10505 54c389bdfd267f5a40b8612ad2ab4259 286 SUPERFAMILY SSF53850 81 281 6.7E-40 T 11-10-2018 DB34_10505 54c389bdfd267f5a40b8612ad2ab4259 286 Pfam PF03466 LysR substrate binding domain 78 281 2.0E-42 T 11-10-2018 IPR005119 LysR, substrate-binding DB34_10505 54c389bdfd267f5a40b8612ad2ab4259 286 SUPERFAMILY SSF46785 2 101 3.38E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB34_10505 54c389bdfd267f5a40b8612ad2ab4259 286 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 2 53 8.3E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB34_10505 54c389bdfd267f5a40b8612ad2ab4259 286 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 41 6.9E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB34_10505 54c389bdfd267f5a40b8612ad2ab4259 286 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 30 6.9E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB34_10505 54c389bdfd267f5a40b8612ad2ab4259 286 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 9 20 6.9E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB34_10505 54c389bdfd267f5a40b8612ad2ab4259 286 Gene3D G3DSA:1.10.10.10 1 79 6.3E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB34_09985 3c3765e7ecfaf5a82ff315d60ac44788 734 Hamap MF_00420 Phosphoribosylformylglycinamidine synthase subunit PurL [purL]. 1 734 317.999 T 11-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 DB34_09985 3c3765e7ecfaf5a82ff315d60ac44788 734 Pfam PF00586 AIR synthase related protein, N-terminal domain 86 187 1.0E-22 T 11-10-2018 IPR016188 PurM-like, N-terminal domain DB34_09985 3c3765e7ecfaf5a82ff315d60ac44788 734 Pfam PF00586 AIR synthase related protein, N-terminal domain 436 557 6.2E-22 T 11-10-2018 IPR016188 PurM-like, N-terminal domain DB34_09985 3c3765e7ecfaf5a82ff315d60ac44788 734 TIGRFAM TIGR01736 FGAM_synth_II: phosphoribosylformylglycinamidine synthase II 17 728 1.1E-279 T 11-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 DB34_09985 3c3765e7ecfaf5a82ff315d60ac44788 734 SUPERFAMILY SSF56042 198 420 8.52E-58 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily DB34_09985 3c3765e7ecfaf5a82ff315d60ac44788 734 Gene3D G3DSA:3.30.1330.10 43 191 1.5E-131 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily DB34_09985 3c3765e7ecfaf5a82ff315d60ac44788 734 Gene3D G3DSA:3.90.650.10 569 732 9.5E-32 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily DB34_09985 3c3765e7ecfaf5a82ff315d60ac44788 734 Gene3D G3DSA:3.30.1330.10 388 561 1.7E-55 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily DB34_09985 3c3765e7ecfaf5a82ff315d60ac44788 734 SUPERFAMILY SSF55326 393 565 6.15E-56 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily DB34_09985 3c3765e7ecfaf5a82ff315d60ac44788 734 Pfam PF02769 AIR synthase related protein, C-terminal domain 201 354 1.0E-34 T 11-10-2018 IPR010918 PurM-like, C-terminal domain DB34_09985 3c3765e7ecfaf5a82ff315d60ac44788 734 Pfam PF02769 AIR synthase related protein, C-terminal domain 574 702 3.4E-18 T 11-10-2018 IPR010918 PurM-like, C-terminal domain DB34_09985 3c3765e7ecfaf5a82ff315d60ac44788 734 PIRSF PIRSF001587 2 734 6.8E-281 T 11-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 DB34_09985 3c3765e7ecfaf5a82ff315d60ac44788 734 SUPERFAMILY SSF56042 570 731 6.88E-32 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily DB34_09985 3c3765e7ecfaf5a82ff315d60ac44788 734 Gene3D G3DSA:3.90.650.10 29 356 1.5E-131 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily DB34_09985 3c3765e7ecfaf5a82ff315d60ac44788 734 SUPERFAMILY SSF55326 14 195 1.29E-50 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily DB34_08795 3466a1c7c9a9c978e6606d38a93a7213 1102 Pfam PF00873 AcrB/AcrD/AcrF family 837 1078 9.8E-78 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DB34_08795 3466a1c7c9a9c978e6606d38a93a7213 1102 Pfam PF00873 AcrB/AcrD/AcrF family 3 784 3.0E-211 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DB34_08795 3466a1c7c9a9c978e6606d38a93a7213 1102 Gene3D G3DSA:3.30.2090.10 711 783 1.1E-195 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DB34_08795 3466a1c7c9a9c978e6606d38a93a7213 1102 Gene3D G3DSA:1.20.1640.10 10 511 1.1E-195 T 11-10-2018 DB34_08795 3466a1c7c9a9c978e6606d38a93a7213 1102 SUPERFAMILY SSF82714 713 784 1.12E-8 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DB34_08795 3466a1c7c9a9c978e6606d38a93a7213 1102 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 9.7E-68 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DB34_08795 3466a1c7c9a9c978e6606d38a93a7213 1102 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 9.7E-68 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DB34_08795 3466a1c7c9a9c978e6606d38a93a7213 1102 PRINTS PR00702 Acriflavin resistance protein family signature 551 568 9.7E-68 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DB34_08795 3466a1c7c9a9c978e6606d38a93a7213 1102 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 9.7E-68 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DB34_08795 3466a1c7c9a9c978e6606d38a93a7213 1102 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 9.7E-68 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DB34_08795 3466a1c7c9a9c978e6606d38a93a7213 1102 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 9.7E-68 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DB34_08795 3466a1c7c9a9c978e6606d38a93a7213 1102 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 9.7E-68 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DB34_08795 3466a1c7c9a9c978e6606d38a93a7213 1102 PRINTS PR00702 Acriflavin resistance protein family signature 615 629 9.7E-68 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DB34_08795 3466a1c7c9a9c978e6606d38a93a7213 1102 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 9.7E-68 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DB34_08795 3466a1c7c9a9c978e6606d38a93a7213 1102 Gene3D G3DSA:3.30.2090.10 179 269 1.1E-195 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DB34_08795 3466a1c7c9a9c978e6606d38a93a7213 1102 Gene3D G3DSA:3.30.70.1430 566 659 1.1E-195 T 11-10-2018 DB34_08795 3466a1c7c9a9c978e6606d38a93a7213 1102 SUPERFAMILY SSF82693 40 133 3.14E-18 T 11-10-2018 DB34_08795 3466a1c7c9a9c978e6606d38a93a7213 1102 SUPERFAMILY SSF82866 292 489 3.53E-45 T 11-10-2018 DB34_08795 3466a1c7c9a9c978e6606d38a93a7213 1102 Gene3D G3DSA:3.30.2090.10 837 861 1.8E-66 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DB34_08795 3466a1c7c9a9c978e6606d38a93a7213 1102 SUPERFAMILY SSF82693 564 660 8.37E-12 T 11-10-2018 DB34_08795 3466a1c7c9a9c978e6606d38a93a7213 1102 Gene3D G3DSA:3.30.70.1430 40 134 1.1E-195 T 11-10-2018 DB34_08795 3466a1c7c9a9c978e6606d38a93a7213 1102 Gene3D G3DSA:1.20.1640.10 512 565 1.1E-195 T 11-10-2018 DB34_08795 3466a1c7c9a9c978e6606d38a93a7213 1102 SUPERFAMILY SSF82714 183 266 1.7E-15 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DB34_08795 3466a1c7c9a9c978e6606d38a93a7213 1102 Gene3D G3DSA:1.20.1640.10 916 1076 1.8E-66 T 11-10-2018 DB34_08795 3466a1c7c9a9c978e6606d38a93a7213 1102 Gene3D G3DSA:3.30.70.1440 870 915 1.8E-66 T 11-10-2018 DB34_08795 3466a1c7c9a9c978e6606d38a93a7213 1102 Gene3D G3DSA:3.30.70.1440 660 710 1.1E-195 T 11-10-2018 DB34_08795 3466a1c7c9a9c978e6606d38a93a7213 1102 Gene3D G3DSA:3.30.70.1320 135 326 1.1E-195 T 11-10-2018 DB34_08795 3466a1c7c9a9c978e6606d38a93a7213 1102 SUPERFAMILY SSF82866 863 1082 4.84E-40 T 11-10-2018 DB34_08795 3466a1c7c9a9c978e6606d38a93a7213 1102 SUPERFAMILY SSF82693 137 324 3.66E-21 T 11-10-2018 DB34_04420 23d90b0fe86fc7a9d4b01cb824ce60bc 747 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 461 597 1.5E-15 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB34_04420 23d90b0fe86fc7a9d4b01cb824ce60bc 747 Gene3D G3DSA:1.10.287.130 345 417 1.6E-16 T 11-10-2018 DB34_04420 23d90b0fe86fc7a9d4b01cb824ce60bc 747 Pfam PF12860 PAS fold 220 339 3.2E-7 T 11-10-2018 DB34_04420 23d90b0fe86fc7a9d4b01cb824ce60bc 747 PRINTS PR00344 Bacterial sensor protein C-terminal signature 545 555 1.2E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB34_04420 23d90b0fe86fc7a9d4b01cb824ce60bc 747 PRINTS PR00344 Bacterial sensor protein C-terminal signature 527 541 1.2E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB34_04420 23d90b0fe86fc7a9d4b01cb824ce60bc 747 PRINTS PR00344 Bacterial sensor protein C-terminal signature 558 576 1.2E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB34_04420 23d90b0fe86fc7a9d4b01cb824ce60bc 747 PRINTS PR00344 Bacterial sensor protein C-terminal signature 582 595 1.2E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB34_04420 23d90b0fe86fc7a9d4b01cb824ce60bc 747 Pfam PF00072 Response regulator receiver domain 625 737 5.2E-15 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB34_04420 23d90b0fe86fc7a9d4b01cb824ce60bc 747 Gene3D G3DSA:3.30.450.20 199 344 5.1E-6 T 11-10-2018 DB34_04420 23d90b0fe86fc7a9d4b01cb824ce60bc 747 SUPERFAMILY SSF55874 408 596 1.76E-29 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB34_04420 23d90b0fe86fc7a9d4b01cb824ce60bc 747 SMART SM00387 460 598 8.3E-28 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB34_04420 23d90b0fe86fc7a9d4b01cb824ce60bc 747 Gene3D G3DSA:3.30.565.10 422 603 8.2E-33 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB34_04420 23d90b0fe86fc7a9d4b01cb824ce60bc 747 Gene3D G3DSA:3.40.50.2300 620 746 3.6E-22 T 11-10-2018 DB34_04420 23d90b0fe86fc7a9d4b01cb824ce60bc 747 SUPERFAMILY SSF47384 345 416 6.47E-12 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DB34_04420 23d90b0fe86fc7a9d4b01cb824ce60bc 747 SUPERFAMILY SSF55785 204 333 1.13E-5 T 11-10-2018 IPR035965 PAS domain superfamily DB34_04420 23d90b0fe86fc7a9d4b01cb824ce60bc 747 Pfam PF00512 His Kinase A (phospho-acceptor) domain 350 417 1.1E-10 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DB34_04420 23d90b0fe86fc7a9d4b01cb824ce60bc 747 SUPERFAMILY SSF52172 623 742 2.85E-22 T 11-10-2018 IPR011006 CheY-like superfamily DB34_04420 23d90b0fe86fc7a9d4b01cb824ce60bc 747 SMART SM00448 623 737 6.6E-14 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB34_04420 23d90b0fe86fc7a9d4b01cb824ce60bc 747 SMART SM00388 350 418 7.7E-13 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DB34_07280 16951c913a666b7348ae92bb964c2db5 368 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 291 366 7.9E-7 T 11-10-2018 IPR006260 TonB/TolA, C-terminal DB34_07280 16951c913a666b7348ae92bb964c2db5 368 SUPERFAMILY SSF74653 287 345 8.04E-9 T 11-10-2018 DB34_07280 16951c913a666b7348ae92bb964c2db5 368 Gene3D G3DSA:3.30.1150.10 267 367 2.3E-9 T 11-10-2018 DB34_07280 16951c913a666b7348ae92bb964c2db5 368 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 290 367 5.0E-11 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 DB34_02830 ed550ad2fe46908e6272c5b67c203923 371 Gene3D G3DSA:3.30.300.130 6 97 7.4E-7 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily DB34_02830 ed550ad2fe46908e6272c5b67c203923 371 SUPERFAMILY SSF117916 7 92 4.9E-10 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily DB34_02830 ed550ad2fe46908e6272c5b67c203923 371 SUPERFAMILY SSF52540 122 367 9.31E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_02830 ed550ad2fe46908e6272c5b67c203923 371 Pfam PF01883 Iron-sulfur cluster assembly protein 10 79 1.5E-13 T 11-10-2018 IPR002744 MIP18 family-like DB34_02830 ed550ad2fe46908e6272c5b67c203923 371 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 120 361 3.8E-99 T 11-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 DB34_02830 ed550ad2fe46908e6272c5b67c203923 371 Hamap MF_02040 Iron-sulfur cluster carrier protein. 115 362 37.027 T 11-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein DB34_02830 ed550ad2fe46908e6272c5b67c203923 371 ProSitePatterns PS01215 Mrp family signature. 225 241 - T 11-10-2018 IPR000808 Mrp, conserved site GO:0005524 DB34_02830 ed550ad2fe46908e6272c5b67c203923 371 Gene3D G3DSA:3.40.50.300 115 360 2.1E-81 T 11-10-2018 DB34_09180 6e676104dea2a50ac697f1b409b5193f 515 SUPERFAMILY SSF52540 12 259 5.82E-80 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_09180 6e676104dea2a50ac697f1b409b5193f 515 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 126 149 7.4E-10 T 11-10-2018 DB34_09180 6e676104dea2a50ac697f1b409b5193f 515 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 233 255 7.4E-10 T 11-10-2018 DB34_09180 6e676104dea2a50ac697f1b409b5193f 515 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 7 508 48.048 T 11-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 DB34_09180 6e676104dea2a50ac697f1b409b5193f 515 Pfam PF03144 Elongation factor Tu domain 2 296 362 5.8E-8 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 DB34_09180 6e676104dea2a50ac697f1b409b5193f 515 PRINTS PR00315 GTP-binding elongation factor signature 88 98 1.1E-11 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB34_09180 6e676104dea2a50ac697f1b409b5193f 515 PRINTS PR00315 GTP-binding elongation factor signature 104 115 1.1E-11 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB34_09180 6e676104dea2a50ac697f1b409b5193f 515 PRINTS PR00315 GTP-binding elongation factor signature 68 76 1.1E-11 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB34_09180 6e676104dea2a50ac697f1b409b5193f 515 PRINTS PR00315 GTP-binding elongation factor signature 140 149 1.1E-11 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB34_09180 6e676104dea2a50ac697f1b409b5193f 515 PRINTS PR00315 GTP-binding elongation factor signature 18 31 1.1E-11 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB34_09180 6e676104dea2a50ac697f1b409b5193f 515 Gene3D G3DSA:3.40.50.300 75 112 1.3E-46 T 11-10-2018 DB34_09180 6e676104dea2a50ac697f1b409b5193f 515 Gene3D G3DSA:3.40.50.300 258 361 1.2E-48 T 11-10-2018 DB34_09180 6e676104dea2a50ac697f1b409b5193f 515 Gene3D G3DSA:3.30.70.3280 372 511 1.1E-44 T 11-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily DB34_09180 6e676104dea2a50ac697f1b409b5193f 515 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 61 76 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site DB34_09180 6e676104dea2a50ac697f1b409b5193f 515 Pfam PF00009 Elongation factor Tu GTP binding domain 16 257 5.3E-48 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB34_09180 6e676104dea2a50ac697f1b409b5193f 515 SUPERFAMILY SSF54980 375 446 2.12E-14 T 11-10-2018 IPR035647 EF-G domain III/V-like DB34_09180 6e676104dea2a50ac697f1b409b5193f 515 SUPERFAMILY SSF50447 244 375 9.34E-28 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DB34_09180 6e676104dea2a50ac697f1b409b5193f 515 Gene3D G3DSA:3.40.50.300 113 195 1.3E-46 T 11-10-2018 DB34_09180 6e676104dea2a50ac697f1b409b5193f 515 Gene3D G3DSA:3.40.50.300 206 257 1.2E-48 T 11-10-2018 DB34_09180 6e676104dea2a50ac697f1b409b5193f 515 Pfam PF16658 Class II release factor RF3, C-terminal domain 369 495 4.7E-43 T 11-10-2018 IPR032090 Peptide chain release factor 3, C-terminal DB34_09180 6e676104dea2a50ac697f1b409b5193f 515 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 19 151 1.9E-22 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DB34_03885 70ea64db77da9fcada68fb4e58a921e5 405 Gene3D G3DSA:1.20.1250.20 16 401 8.7E-31 T 11-10-2018 DB34_03885 70ea64db77da9fcada68fb4e58a921e5 405 SUPERFAMILY SSF103473 19 403 5.89E-40 T 11-10-2018 IPR036259 MFS transporter superfamily DB34_03885 70ea64db77da9fcada68fb4e58a921e5 405 Hamap MF_01118 Uncharacterized MFS-type transporter YhhS [yhhS]. 11 405 39.936 T 11-10-2018 IPR023008 Uncharacterized MFS-type transporter YhhS-like DB34_03885 70ea64db77da9fcada68fb4e58a921e5 405 Pfam PF07690 Major Facilitator Superfamily 27 333 1.1E-17 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DB34_03225 8185d3eda1aeb1e8b4b62df3f0eb70ef 597 SMART SM00382 384 570 2.0E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_03225 8185d3eda1aeb1e8b4b62df3f0eb70ef 597 ProSitePatterns PS00211 ABC transporters family signature. 496 510 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB34_03225 8185d3eda1aeb1e8b4b62df3f0eb70ef 597 Pfam PF00005 ABC transporter 376 524 4.9E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB34_03225 8185d3eda1aeb1e8b4b62df3f0eb70ef 597 SUPERFAMILY SSF52540 348 595 2.76E-87 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_03225 8185d3eda1aeb1e8b4b62df3f0eb70ef 597 Gene3D G3DSA:1.20.1560.10 6 345 6.5E-49 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DB34_03225 8185d3eda1aeb1e8b4b62df3f0eb70ef 597 Pfam PF00664 ABC transporter transmembrane region 41 300 2.7E-14 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DB34_03225 8185d3eda1aeb1e8b4b62df3f0eb70ef 597 SUPERFAMILY SSF90123 31 339 1.7E-42 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DB34_03225 8185d3eda1aeb1e8b4b62df3f0eb70ef 597 Gene3D G3DSA:3.40.50.300 349 597 4.5E-88 T 11-10-2018 DB34_06515 c67852ad64e43fc7f31233b445420aed 536 Pfam PF13007 Transposase C of IS166 homeodomain 43 119 1.8E-11 T 11-10-2018 IPR024463 Transposase TnpC, homeodomain DB34_06515 c67852ad64e43fc7f31233b445420aed 536 Pfam PF13817 IS66 C-terminal element 486 523 7.0E-15 T 11-10-2018 IPR039552 Transposase IS66, C-terminal DB34_06515 c67852ad64e43fc7f31233b445420aed 536 Pfam PF13005 zinc-finger binding domain of transposase IS66 126 168 2.3E-14 T 11-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 DB34_06515 c67852ad64e43fc7f31233b445420aed 536 Pfam PF03050 Transposase IS66 family 183 479 5.3E-96 T 11-10-2018 IPR004291 Transposase, IS66 DB34_06535 c67852ad64e43fc7f31233b445420aed 536 Pfam PF13007 Transposase C of IS166 homeodomain 43 119 1.8E-11 T 11-10-2018 IPR024463 Transposase TnpC, homeodomain DB34_06535 c67852ad64e43fc7f31233b445420aed 536 Pfam PF13817 IS66 C-terminal element 486 523 7.0E-15 T 11-10-2018 IPR039552 Transposase IS66, C-terminal DB34_06535 c67852ad64e43fc7f31233b445420aed 536 Pfam PF13005 zinc-finger binding domain of transposase IS66 126 168 2.3E-14 T 11-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 DB34_06535 c67852ad64e43fc7f31233b445420aed 536 Pfam PF03050 Transposase IS66 family 183 479 5.3E-96 T 11-10-2018 IPR004291 Transposase, IS66 DB34_05860 2e76c2ca5588cf7ceb896ab48d4ce38b 467 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 306 317 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DB34_05860 2e76c2ca5588cf7ceb896ab48d4ce38b 467 Pfam PF02589 LUD domain 68 287 4.6E-37 T 11-10-2018 IPR003741 LUD domain DB34_05860 2e76c2ca5588cf7ceb896ab48d4ce38b 467 Pfam PF13183 4Fe-4S dicluster domain 304 369 5.8E-10 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DB34_05860 2e76c2ca5588cf7ceb896ab48d4ce38b 467 SUPERFAMILY SSF100950 62 288 2.76E-33 T 11-10-2018 IPR037171 NagB/RpiA transferase-like DB34_05860 2e76c2ca5588cf7ceb896ab48d4ce38b 467 Gene3D G3DSA:3.40.50.10420 134 287 4.0E-8 T 11-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily DB34_05860 2e76c2ca5588cf7ceb896ab48d4ce38b 467 Gene3D G3DSA:1.10.1060.10 293 387 1.5E-6 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DB34_05860 2e76c2ca5588cf7ceb896ab48d4ce38b 467 SUPERFAMILY SSF46548 299 390 4.45E-16 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DB34_00415 82fc1b7504abe6ab28c6e0331750ee4f 312 PIRSF PIRSF039102 43 312 2.8E-71 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DB34_00415 82fc1b7504abe6ab28c6e0331750ee4f 312 PIRSF PIRSF039102 2 51 2.0E-9 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DB34_00415 82fc1b7504abe6ab28c6e0331750ee4f 312 Gene3D G3DSA:3.30.1490.20 116 179 1.9E-62 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 DB34_00415 82fc1b7504abe6ab28c6e0331750ee4f 312 Gene3D G3DSA:3.30.470.20 91 304 1.9E-62 T 11-10-2018 DB34_00415 82fc1b7504abe6ab28c6e0331750ee4f 312 SUPERFAMILY SSF56059 101 311 7.07E-48 T 11-10-2018 DB34_00415 82fc1b7504abe6ab28c6e0331750ee4f 312 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 5 309 33.184 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DB34_00415 82fc1b7504abe6ab28c6e0331750ee4f 312 SUPERFAMILY SSF52440 5 101 3.07E-29 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily DB34_00415 82fc1b7504abe6ab28c6e0331750ee4f 312 Gene3D G3DSA:3.40.50.20 4 89 7.9E-30 T 11-10-2018 DB34_00415 82fc1b7504abe6ab28c6e0331750ee4f 312 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 6 308 4.2E-84 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DB34_00415 82fc1b7504abe6ab28c6e0331750ee4f 312 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 247 279 - T 11-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DB34_00415 82fc1b7504abe6ab28c6e0331750ee4f 312 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 68 79 - T 11-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DB34_00415 82fc1b7504abe6ab28c6e0331750ee4f 312 Pfam PF01820 D-ala D-ala ligase N-terminus 6 89 1.2E-19 T 11-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DB34_00415 82fc1b7504abe6ab28c6e0331750ee4f 312 Pfam PF07478 D-ala D-ala ligase C-terminus 109 306 7.4E-42 T 11-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DB34_01845 430078e37bb38434c1de300e70f256cd 349 Gene3D G3DSA:1.10.1610.10 17 77 1.8E-9 T 11-10-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 DB34_01845 430078e37bb38434c1de300e70f256cd 349 SUPERFAMILY SSF52733 21 346 8.11E-99 T 11-10-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 DB34_01845 430078e37bb38434c1de300e70f256cd 349 Gene3D G3DSA:3.40.50.10210 78 327 9.0E-85 T 11-10-2018 DB34_01845 430078e37bb38434c1de300e70f256cd 349 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 31 345 1.6E-105 T 11-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 DB34_01845 430078e37bb38434c1de300e70f256cd 349 Pfam PF02277 Phosphoribosyltransferase 28 345 5.3E-106 T 11-10-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 DB34_09320 c4335ccd864d360e1d27c0af4ea2bae6 436 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 20 430 4.3E-224 T 11-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 DB34_09320 c4335ccd864d360e1d27c0af4ea2bae6 436 Gene3D G3DSA:1.10.580.10 66 403 1.6E-149 T 11-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 DB34_09320 c4335ccd864d360e1d27c0af4ea2bae6 436 Gene3D G3DSA:2.20.28.60 1 57 4.8E-31 T 11-10-2018 DB34_09320 c4335ccd864d360e1d27c0af4ea2bae6 436 ProSitePatterns PS00480 Citrate synthase signature. 310 322 - T 11-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 DB34_09320 c4335ccd864d360e1d27c0af4ea2bae6 436 Pfam PF00285 Citrate synthase, C-terminal domain 54 419 9.3E-135 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 DB34_09320 c4335ccd864d360e1d27c0af4ea2bae6 436 PRINTS PR00143 Citrate synthase signature 303 323 2.9E-57 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 DB34_09320 c4335ccd864d360e1d27c0af4ea2bae6 436 PRINTS PR00143 Citrate synthase signature 226 241 2.9E-57 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 DB34_09320 c4335ccd864d360e1d27c0af4ea2bae6 436 PRINTS PR00143 Citrate synthase signature 248 276 2.9E-57 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 DB34_09320 c4335ccd864d360e1d27c0af4ea2bae6 436 PRINTS PR00143 Citrate synthase signature 367 383 2.9E-57 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 DB34_09320 c4335ccd864d360e1d27c0af4ea2bae6 436 PRINTS PR00143 Citrate synthase signature 387 401 2.9E-57 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 DB34_09320 c4335ccd864d360e1d27c0af4ea2bae6 436 PRINTS PR00143 Citrate synthase signature 172 185 2.9E-57 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 DB34_09320 c4335ccd864d360e1d27c0af4ea2bae6 436 SUPERFAMILY SSF48256 14 436 8.5E-167 T 11-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 DB34_09320 c4335ccd864d360e1d27c0af4ea2bae6 436 PIRSF PIRSF001369 45 436 2.9E-170 T 11-10-2018 IPR024176 Citrate synthase, bacterial-type DB34_09320 c4335ccd864d360e1d27c0af4ea2bae6 436 Gene3D G3DSA:1.10.230.10 275 384 1.6E-149 T 11-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain DB34_02010 e3f99fb7bcda17e169a6c20d2208e36f 100 Gene3D G3DSA:3.30.70.100 1 100 9.2E-29 T 11-10-2018 DB34_02010 e3f99fb7bcda17e169a6c20d2208e36f 100 SUPERFAMILY SSF54909 5 98 2.08E-27 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel DB34_02010 e3f99fb7bcda17e169a6c20d2208e36f 100 Pfam PF03992 Antibiotic biosynthesis monooxygenase 5 77 1.3E-14 T 11-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain DB34_10605 7a0d00092af33c827b1fd25ab69f9f5b 266 SUPERFAMILY SSF53613 2 265 1.56E-76 T 11-10-2018 IPR029056 Ribokinase-like DB34_10605 7a0d00092af33c827b1fd25ab69f9f5b 266 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 5 261 2.0E-92 T 11-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DB34_10605 7a0d00092af33c827b1fd25ab69f9f5b 266 Gene3D G3DSA:3.40.1190.20 1 266 2.5E-97 T 11-10-2018 IPR029056 Ribokinase-like DB34_10605 7a0d00092af33c827b1fd25ab69f9f5b 266 Pfam PF08543 Phosphomethylpyrimidine kinase 12 259 1.3E-90 T 11-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 DB34_05895 9dc16148530b8d7936830c3101ddfb69 295 TIGRFAM TIGR03473 HpnK: hopanoid biosynthesis associated protein HpnK 1 280 4.3E-113 T 11-10-2018 IPR017836 Hopanoid biosynthesis associated protein HpnK DB34_05895 9dc16148530b8d7936830c3101ddfb69 295 Pfam PF04794 YdjC-like protein 5 268 5.4E-55 T 11-10-2018 IPR006879 Carbohydrate deacetylase YdjC-like DB34_05895 9dc16148530b8d7936830c3101ddfb69 295 Gene3D G3DSA:3.20.20.370 1 281 2.3E-51 T 11-10-2018 DB34_05895 9dc16148530b8d7936830c3101ddfb69 295 SUPERFAMILY SSF88713 1 280 7.34E-67 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 DB34_10265 cba90660e1d11369a32e003d73f063d0 626 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 29 622 1.1E-217 T 11-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 DB34_10265 cba90660e1d11369a32e003d73f063d0 626 SMART SM00490 265 346 4.0E-28 T 11-10-2018 IPR001650 Helicase, C-terminal DB34_10265 cba90660e1d11369a32e003d73f063d0 626 Gene3D G3DSA:3.40.50.300 224 355 1.3E-38 T 11-10-2018 DB34_10265 cba90660e1d11369a32e003d73f063d0 626 Pfam PF00570 HRDC domain 555 621 4.5E-23 T 11-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 DB34_10265 cba90660e1d11369a32e003d73f063d0 626 SMART SM00956 427 530 4.4E-47 T 11-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 DB34_10265 cba90660e1d11369a32e003d73f063d0 626 Pfam PF09382 RQC domain 425 530 9.6E-35 T 11-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 DB34_10265 cba90660e1d11369a32e003d73f063d0 626 SUPERFAMILY SSF47819 550 624 2.43E-23 T 11-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 DB34_10265 cba90660e1d11369a32e003d73f063d0 626 Pfam PF16124 RecQ zinc-binding 358 420 5.8E-15 T 11-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain DB34_10265 cba90660e1d11369a32e003d73f063d0 626 Gene3D G3DSA:1.10.150.80 554 624 4.9E-24 T 11-10-2018 DB34_10265 cba90660e1d11369a32e003d73f063d0 626 Gene3D G3DSA:1.10.10.10 356 540 2.6E-42 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB34_10265 cba90660e1d11369a32e003d73f063d0 626 SMART SM00341 551 626 4.0E-15 T 11-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 DB34_10265 cba90660e1d11369a32e003d73f063d0 626 SMART SM00487 37 233 1.1E-33 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DB34_10265 cba90660e1d11369a32e003d73f063d0 626 Pfam PF00270 DEAD/DEAH box helicase 44 203 1.3E-21 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DB34_10265 cba90660e1d11369a32e003d73f063d0 626 Gene3D G3DSA:3.40.50.300 21 223 5.6E-76 T 11-10-2018 DB34_10265 cba90660e1d11369a32e003d73f063d0 626 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 30 480 2.3E-138 T 11-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 DB34_10265 cba90660e1d11369a32e003d73f063d0 626 SUPERFAMILY SSF52540 81 367 3.58E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_10265 cba90660e1d11369a32e003d73f063d0 626 Pfam PF00271 Helicase conserved C-terminal domain 241 345 5.4E-18 T 11-10-2018 IPR001650 Helicase, C-terminal DB34_10265 cba90660e1d11369a32e003d73f063d0 626 SUPERFAMILY SSF46785 418 535 2.86E-36 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB34_12735 a4e828e6f74e2d38305290cfd6104d3d 719 Pfam PF13502 AsmA-like C-terminal region 463 642 3.0E-7 T 11-10-2018 IPR032712 AsmA-like, C-terminal DB34_12735 a4e828e6f74e2d38305290cfd6104d3d 719 Pfam PF05170 AsmA family 9 170 3.3E-17 T 11-10-2018 IPR007844 AsmA DB34_05795 e44b1bcbf3b59db419008c1576057673 193 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 1 184 2.3E-52 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 DB34_05795 e44b1bcbf3b59db419008c1576057673 193 SUPERFAMILY SSF53178 1 185 2.75E-63 T 11-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 DB34_05795 e44b1bcbf3b59db419008c1576057673 193 Gene3D G3DSA:3.40.50.1470 1 188 4.7E-62 T 11-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 DB34_05795 e44b1bcbf3b59db419008c1576057673 193 Pfam PF01195 Peptidyl-tRNA hydrolase 4 184 1.2E-51 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 DB34_05795 e44b1bcbf3b59db419008c1576057673 193 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 1 179 32.233 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 DB34_05795 e44b1bcbf3b59db419008c1576057673 193 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 107 117 - T 11-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 DB34_01965 10f1881b3e3d5a6616b8e4b63fbdb0ad 172 Pfam PF04073 Aminoacyl-tRNA editing domain 46 157 5.5E-26 T 11-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 DB34_01965 10f1881b3e3d5a6616b8e4b63fbdb0ad 172 SUPERFAMILY SSF55826 15 166 1.31E-38 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 DB34_01965 10f1881b3e3d5a6616b8e4b63fbdb0ad 172 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 15 166 4.3E-46 T 11-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC DB34_01965 10f1881b3e3d5a6616b8e4b63fbdb0ad 172 PIRSF PIRSF006181 10 169 8.9E-45 T 11-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC DB34_01965 10f1881b3e3d5a6616b8e4b63fbdb0ad 172 Gene3D G3DSA:3.90.960.10 8 168 1.2E-48 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 DB34_00950 c1b7f783e051c80aca32242c6116ee6c 387 Pfam PF05272 Virulence-associated protein E 102 293 2.0E-64 T 11-10-2018 IPR007936 Virulence-associated E DB34_06100 87fbc7482fff356a82033600d0363b73 155 Gene3D G3DSA:2.170.150.20 16 150 3.2E-52 T 11-10-2018 DB34_06100 87fbc7482fff356a82033600d0363b73 155 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 20 134 4.7E-42 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 DB34_06100 87fbc7482fff356a82033600d0363b73 155 SUPERFAMILY SSF51316 18 137 7.85E-52 T 11-10-2018 IPR011057 Mss4-like superfamily DB34_06100 87fbc7482fff356a82033600d0363b73 155 Pfam PF01641 SelR domain 19 133 1.4E-45 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 DB34_07535 41048652b3b3eddd26026085610a27a5 337 Pfam PF00571 CBS domain 214 271 2.0E-7 T 11-10-2018 IPR000644 CBS domain DB34_07535 41048652b3b3eddd26026085610a27a5 337 Pfam PF00571 CBS domain 279 334 2.5E-10 T 11-10-2018 IPR000644 CBS domain DB34_07535 41048652b3b3eddd26026085610a27a5 337 Gene3D G3DSA:3.40.50.10490 17 209 2.5E-58 T 11-10-2018 DB34_07535 41048652b3b3eddd26026085610a27a5 337 SUPERFAMILY SSF54631 273 335 1.62E-8 T 11-10-2018 DB34_07535 41048652b3b3eddd26026085610a27a5 337 SMART SM00116 286 336 2.6 T 11-10-2018 IPR000644 CBS domain DB34_07535 41048652b3b3eddd26026085610a27a5 337 SMART SM00116 223 271 1.6 T 11-10-2018 IPR000644 CBS domain DB34_07535 41048652b3b3eddd26026085610a27a5 337 Pfam PF01380 SIS domain 58 186 2.2E-27 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DB34_07535 41048652b3b3eddd26026085610a27a5 337 SUPERFAMILY SSF53697 23 282 1.02E-59 T 11-10-2018 DB34_07535 41048652b3b3eddd26026085610a27a5 337 PIRSF PIRSF004692 3 337 7.0E-121 T 11-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 DB34_07535 41048652b3b3eddd26026085610a27a5 337 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 59 327 8.4E-89 T 11-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 DB34_07535 41048652b3b3eddd26026085610a27a5 337 Gene3D G3DSA:3.10.580.10 210 334 4.6E-38 T 11-10-2018 DB34_04345 e8c07eead777ace18becd6d9837973dd 322 Gene3D G3DSA:3.30.70.1660 74 302 2.3E-99 T 11-10-2018 DB34_04345 e8c07eead777ace18becd6d9837973dd 322 Gene3D G3DSA:1.20.58.410 1 59 1.1E-6 T 11-10-2018 DB34_04345 e8c07eead777ace18becd6d9837973dd 322 Pfam PF03462 PCRF domain 2 164 2.6E-50 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 DB34_04345 e8c07eead777ace18becd6d9837973dd 322 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 3 310 33.948 T 11-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 DB34_04345 e8c07eead777ace18becd6d9837973dd 322 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 2 309 9.3E-143 T 11-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 DB34_04345 e8c07eead777ace18becd6d9837973dd 322 SUPERFAMILY SSF75620 2 309 1.83E-124 T 11-10-2018 DB34_04345 e8c07eead777ace18becd6d9837973dd 322 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 189 205 - T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 DB34_04345 e8c07eead777ace18becd6d9837973dd 322 Gene3D G3DSA:3.30.160.20 170 265 2.3E-99 T 11-10-2018 DB34_04345 e8c07eead777ace18becd6d9837973dd 322 Pfam PF00472 RF-1 domain 173 282 7.3E-43 T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 DB34_04345 e8c07eead777ace18becd6d9837973dd 322 SMART SM00937 29 139 3.4E-54 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 DB34_01915 b2f15794c72dfa4224db1747b91d23e7 207 ProSitePatterns PS01114 GPR1/FUN34/yaaH family signature. 16 25 - T 11-10-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 DB34_01915 b2f15794c72dfa4224db1747b91d23e7 207 Pfam PF01184 GPR1/FUN34/yaaH family 6 191 5.7E-44 T 11-10-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 DB34_07660 61dcb171a54592c6b7c6f817868968b3 1211 Gene3D G3DSA:3.40.309.10 798 990 4.8E-137 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DB34_07660 61dcb171a54592c6b7c6f817868968b3 1211 Gene3D G3DSA:3.40.605.10 561 1019 4.8E-137 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DB34_07660 61dcb171a54592c6b7c6f817868968b3 1211 SUPERFAMILY SSF53720 570 1019 2.62E-120 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DB34_07660 61dcb171a54592c6b7c6f817868968b3 1211 SUPERFAMILY SSF51730 184 532 1.92E-115 T 11-10-2018 IPR029041 FAD-linked oxidoreductase-like DB34_07660 61dcb171a54592c6b7c6f817868968b3 1211 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 525 1019 2.5E-207 T 11-10-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 DB34_07660 61dcb171a54592c6b7c6f817868968b3 1211 Gene3D G3DSA:3.20.20.220 143 525 1.1E-141 T 11-10-2018 DB34_07660 61dcb171a54592c6b7c6f817868968b3 1211 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 70 181 2.0E-41 T 11-10-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 DB34_07660 61dcb171a54592c6b7c6f817868968b3 1211 PIRSF PIRSF000197 2 1211 0.0 T 11-10-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 DB34_07660 61dcb171a54592c6b7c6f817868968b3 1211 Pfam PF00171 Aldehyde dehydrogenase family 575 1012 3.9E-114 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DB34_07660 61dcb171a54592c6b7c6f817868968b3 1211 Pfam PF01619 Proline dehydrogenase 191 488 1.0E-96 T 11-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 DB34_07660 61dcb171a54592c6b7c6f817868968b3 1211 SUPERFAMILY SSF81935 15 183 3.53E-56 T 11-10-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 DB34_07660 61dcb171a54592c6b7c6f817868968b3 1211 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 823 834 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 DB34_07660 61dcb171a54592c6b7c6f817868968b3 1211 Gene3D G3DSA:3.20.20.220 14 105 4.0E-11 T 11-10-2018 DB34_07970 ca8d345d2653de4f3fc147d8b2993531 131 Pfam PF12200 Domain of unknown function (DUF3597) 3 128 6.2E-51 T 11-10-2018 IPR022016 Domain of unknown function DUF3597 DB34_07970 ca8d345d2653de4f3fc147d8b2993531 131 SUPERFAMILY SSF158634 1 131 1.19E-46 T 11-10-2018 DB34_03550 4fd66da992c8a8e6fe0a734194b2dc23 301 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 128 142 4.9E-37 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DB34_03550 4fd66da992c8a8e6fe0a734194b2dc23 301 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 228 239 4.9E-37 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DB34_03550 4fd66da992c8a8e6fe0a734194b2dc23 301 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 162 180 4.9E-37 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DB34_03550 4fd66da992c8a8e6fe0a734194b2dc23 301 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 199 216 4.9E-37 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DB34_03550 4fd66da992c8a8e6fe0a734194b2dc23 301 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 250 259 4.9E-37 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DB34_03550 4fd66da992c8a8e6fe0a734194b2dc23 301 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 280 36.682 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DB34_03550 4fd66da992c8a8e6fe0a734194b2dc23 301 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 282 6.2E-108 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DB34_03550 4fd66da992c8a8e6fe0a734194b2dc23 301 SUPERFAMILY SSF52096 24 281 2.85E-79 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DB34_03550 4fd66da992c8a8e6fe0a734194b2dc23 301 Pfam PF01039 Carboxyl transferase domain 94 239 1.9E-17 T 11-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 DB34_03550 4fd66da992c8a8e6fe0a734194b2dc23 301 Gene3D G3DSA:3.90.226.10 24 284 1.2E-77 T 11-10-2018 DB34_08605 d2a706462067b45a25cb2ac8fbfdaa9d 1390 Gene3D G3DSA:2.40.270.10 1081 1288 2.1E-81 T 11-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB34_08605 d2a706462067b45a25cb2ac8fbfdaa9d 1390 Pfam PF04560 RNA polymerase Rpb2, domain 7 1312 1386 7.3E-27 T 11-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB34_08605 d2a706462067b45a25cb2ac8fbfdaa9d 1390 Gene3D G3DSA:2.40.50.150 865 986 2.4E-45 T 11-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB34_08605 d2a706462067b45a25cb2ac8fbfdaa9d 1390 Pfam PF04563 RNA polymerase beta subunit 30 531 2.1E-29 T 11-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB34_08605 d2a706462067b45a25cb2ac8fbfdaa9d 1390 Pfam PF00562 RNA polymerase Rpb2, domain 6 751 1310 3.3E-166 T 11-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB34_08605 d2a706462067b45a25cb2ac8fbfdaa9d 1390 Pfam PF04561 RNA polymerase Rpb2, domain 2 390 488 3.7E-18 T 11-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB34_08605 d2a706462067b45a25cb2ac8fbfdaa9d 1390 Gene3D G3DSA:3.90.1100.10 21 165 7.7E-54 T 11-10-2018 DB34_08605 d2a706462067b45a25cb2ac8fbfdaa9d 1390 Gene3D G3DSA:3.90.1100.10 476 660 2.0E-70 T 11-10-2018 DB34_08605 d2a706462067b45a25cb2ac8fbfdaa9d 1390 Gene3D G3DSA:2.40.270.10 825 864 3.4E-7 T 11-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB34_08605 d2a706462067b45a25cb2ac8fbfdaa9d 1390 Pfam PF10385 RNA polymerase beta subunit external 1 domain 625 690 5.0E-17 T 11-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB34_08605 d2a706462067b45a25cb2ac8fbfdaa9d 1390 Gene3D G3DSA:3.90.1100.10 681 747 2.4E-20 T 11-10-2018 DB34_08605 d2a706462067b45a25cb2ac8fbfdaa9d 1390 Gene3D G3DSA:3.90.1110.10 166 269 6.5E-23 T 11-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB34_08605 d2a706462067b45a25cb2ac8fbfdaa9d 1390 Gene3D G3DSA:3.90.1800.10 1298 1355 8.3E-11 T 11-10-2018 DB34_08605 d2a706462067b45a25cb2ac8fbfdaa9d 1390 Pfam PF04565 RNA polymerase Rpb2, domain 3 547 615 6.7E-32 T 11-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB34_08605 d2a706462067b45a25cb2ac8fbfdaa9d 1390 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 12 1385 0.0 T 11-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB34_08605 d2a706462067b45a25cb2ac8fbfdaa9d 1390 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1108 1120 - T 11-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB34_08605 d2a706462067b45a25cb2ac8fbfdaa9d 1390 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 16 1388 12.3 T 11-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB34_08605 d2a706462067b45a25cb2ac8fbfdaa9d 1390 Gene3D G3DSA:3.90.1110.10 356 475 2.4E-33 T 11-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB34_08605 d2a706462067b45a25cb2ac8fbfdaa9d 1390 SUPERFAMILY SSF64484 14 1387 0.0 T 11-10-2018 DB34_08605 d2a706462067b45a25cb2ac8fbfdaa9d 1390 Gene3D G3DSA:2.40.50.100 748 824 4.6E-30 T 11-10-2018 DB34_08450 8f2f812de1efa476fcd358f0737de0cc 176 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 1 142 31.006 T 11-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 DB34_08450 8f2f812de1efa476fcd358f0737de0cc 176 Gene3D G3DSA:2.40.50.140 29 138 1.1E-36 T 11-10-2018 DB34_08450 8f2f812de1efa476fcd358f0737de0cc 176 Pfam PF03100 CcmE 3 132 7.9E-45 T 11-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 DB34_08450 8f2f812de1efa476fcd358f0737de0cc 176 SUPERFAMILY SSF82093 29 138 1.19E-35 T 11-10-2018 IPR036127 CcmE-like superfamily GO:0005886|GO:0017003|GO:0017004 DB34_04435 5a690a3ce162d5c3b55c858ef79073f1 412 Pfam PF13660 Domain of unknown function (DUF4147) 1 219 1.5E-84 T 11-10-2018 IPR025286 MOFRL-associated domain Reactome: R-HSA-70350 DB34_04435 5a690a3ce162d5c3b55c858ef79073f1 412 SUPERFAMILY SSF82544 1 411 9.55E-144 T 11-10-2018 DB34_04435 5a690a3ce162d5c3b55c858ef79073f1 412 Pfam PF05161 MOFRL family 298 405 3.4E-36 T 11-10-2018 IPR007835 MOFRL domain Reactome: R-HSA-70350 DB34_04435 5a690a3ce162d5c3b55c858ef79073f1 412 Gene3D G3DSA:3.40.50.10180 11 230 6.6E-85 T 11-10-2018 IPR038614 Glycerate kinase, N-terminal domain superfamily Reactome: R-HSA-70350 DB34_04435 5a690a3ce162d5c3b55c858ef79073f1 412 Gene3D G3DSA:3.40.1480.10 231 412 1.4E-53 T 11-10-2018 IPR037035 Glycerate kinase-like, C-terminal domain superfamily DB34_09285 34ef8f5dd11220bbe6531199b2fef920 643 Pfam PF02867 Ribonucleotide reductase, barrel domain 122 442 6.2E-73 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DB34_09285 34ef8f5dd11220bbe6531199b2fef920 643 SUPERFAMILY SSF51998 121 607 1.86E-138 T 11-10-2018 DB34_09285 34ef8f5dd11220bbe6531199b2fef920 643 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 54 118 2.0E-11 T 11-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DB34_09285 34ef8f5dd11220bbe6531199b2fef920 643 Gene3D G3DSA:3.20.70.20 32 606 3.2E-173 T 11-10-2018 DB34_09285 34ef8f5dd11220bbe6531199b2fef920 643 Pfam PF02867 Ribonucleotide reductase, barrel domain 444 596 9.3E-38 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DB34_09285 34ef8f5dd11220bbe6531199b2fef920 643 PRINTS PR01183 Ribonucleotide reductase large chain signature 414 437 1.9E-15 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DB34_09285 34ef8f5dd11220bbe6531199b2fef920 643 PRINTS PR01183 Ribonucleotide reductase large chain signature 195 214 1.9E-15 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DB34_09285 34ef8f5dd11220bbe6531199b2fef920 643 PRINTS PR01183 Ribonucleotide reductase large chain signature 386 408 1.9E-15 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DB34_09285 34ef8f5dd11220bbe6531199b2fef920 643 SUPERFAMILY SSF48168 46 117 1.05E-13 T 11-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DB34_12010 169f12fbbe3363062c381ac6aa6b9c84 540 Gene3D G3DSA:3.40.50.300 288 536 3.7E-60 T 11-10-2018 DB34_12010 169f12fbbe3363062c381ac6aa6b9c84 540 Gene3D G3DSA:3.40.50.300 4 284 1.8E-63 T 11-10-2018 DB34_12010 169f12fbbe3363062c381ac6aa6b9c84 540 Pfam PF00005 ABC transporter 340 471 1.7E-19 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB34_12010 169f12fbbe3363062c381ac6aa6b9c84 540 SUPERFAMILY SSF52540 2 257 1.14E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_12010 169f12fbbe3363062c381ac6aa6b9c84 540 Pfam PF12848 ABC transporter 229 311 2.1E-25 T 11-10-2018 IPR032781 ABC-transporter extension domain DB34_12010 169f12fbbe3363062c381ac6aa6b9c84 540 SUPERFAMILY SSF52540 303 530 1.39E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_12010 169f12fbbe3363062c381ac6aa6b9c84 540 ProSitePatterns PS00211 ABC transporters family signature. 443 457 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB34_12010 169f12fbbe3363062c381ac6aa6b9c84 540 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB34_12010 169f12fbbe3363062c381ac6aa6b9c84 540 SMART SM00382 349 516 2.8E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_12010 169f12fbbe3363062c381ac6aa6b9c84 540 SMART SM00382 26 235 8.1E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_12010 169f12fbbe3363062c381ac6aa6b9c84 540 Pfam PF00005 ABC transporter 20 190 2.1E-24 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB34_02420 dae149205e908a2487f4ee2f7527c853 160 SUPERFAMILY SSF54292 6 83 2.62E-18 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 DB34_02420 dae149205e908a2487f4ee2f7527c853 160 Gene3D G3DSA:1.10.150.120 81 159 5.7E-23 T 11-10-2018 DB34_02420 dae149205e908a2487f4ee2f7527c853 160 Pfam PF01799 [2Fe-2S] binding domain 76 147 1.8E-22 T 11-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 DB34_02420 dae149205e908a2487f4ee2f7527c853 160 SUPERFAMILY SSF47741 76 154 4.19E-25 T 11-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily DB34_02420 dae149205e908a2487f4ee2f7527c853 160 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 8 57 1.3E-5 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 DB34_02420 dae149205e908a2487f4ee2f7527c853 160 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 41 49 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 DB34_02420 dae149205e908a2487f4ee2f7527c853 160 Gene3D G3DSA:3.10.20.30 3 75 3.4E-23 T 11-10-2018 IPR012675 Beta-grasp domain superfamily DB34_09355 339669889a20a5562173fbcf0b04035f 206 Pfam PF13462 Thioredoxin 38 202 4.9E-34 T 11-10-2018 IPR012336 Thioredoxin-like fold DB34_09355 339669889a20a5562173fbcf0b04035f 206 Gene3D G3DSA:3.40.30.10 29 206 1.7E-36 T 11-10-2018 DB34_09355 339669889a20a5562173fbcf0b04035f 206 SUPERFAMILY SSF52833 35 202 4.69E-29 T 11-10-2018 IPR036249 Thioredoxin-like superfamily DB34_01160 d38eacf1eebd55196f1df37d24ebfce6 280 Pfam PF00106 short chain dehydrogenase 3 184 1.6E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_01160 d38eacf1eebd55196f1df37d24ebfce6 280 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 131 159 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DB34_01160 d38eacf1eebd55196f1df37d24ebfce6 280 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 71 82 2.0E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_01160 d38eacf1eebd55196f1df37d24ebfce6 280 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 124 132 2.0E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_01160 d38eacf1eebd55196f1df37d24ebfce6 280 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 163 2.0E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_01160 d38eacf1eebd55196f1df37d24ebfce6 280 SUPERFAMILY SSF51735 3 202 3.69E-51 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily DB34_01160 d38eacf1eebd55196f1df37d24ebfce6 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 2.9E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_01160 d38eacf1eebd55196f1df37d24ebfce6 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 71 82 2.9E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_01160 d38eacf1eebd55196f1df37d24ebfce6 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 118 134 2.9E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_01160 d38eacf1eebd55196f1df37d24ebfce6 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 144 163 2.9E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_01160 d38eacf1eebd55196f1df37d24ebfce6 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 182 2.9E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_01160 d38eacf1eebd55196f1df37d24ebfce6 280 Gene3D G3DSA:3.40.50.720 2 261 2.1E-54 T 11-10-2018 DB34_00715 ded7f1d45a918ca12756e7992cd3445e 519 TIGRFAM TIGR04367 HpnR_B12_rSAM: hopanoid C-3 methylase HpnR 1 488 3.8E-272 T 11-10-2018 IPR027564 Hopanoid C-3 methylase HpnR DB34_00715 ded7f1d45a918ca12756e7992cd3445e 519 SUPERFAMILY SSF102114 170 383 3.53E-30 T 11-10-2018 DB34_00715 ded7f1d45a918ca12756e7992cd3445e 519 SMART SM00729 185 388 7.8E-21 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DB34_00715 ded7f1d45a918ca12756e7992cd3445e 519 SUPERFAMILY SSF52242 23 109 5.49E-7 T 11-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 DB34_00715 ded7f1d45a918ca12756e7992cd3445e 519 Pfam PF02310 B12 binding domain 18 127 4.0E-18 T 11-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 DB34_00715 ded7f1d45a918ca12756e7992cd3445e 519 Pfam PF04055 Radical SAM superfamily 189 348 6.6E-15 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DB34_00715 ded7f1d45a918ca12756e7992cd3445e 519 Gene3D G3DSA:3.20.20.70 165 410 7.6E-14 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB34_12100 2858ed1f5d6019d0f8f52a92083dd22d 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 27 86 2.3E-13 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB34_12100 2858ed1f5d6019d0f8f52a92083dd22d 317 SUPERFAMILY SSF46785 25 109 7.22E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB34_12100 2858ed1f5d6019d0f8f52a92083dd22d 317 Gene3D G3DSA:3.40.190.10 127 309 1.8E-11 T 11-10-2018 DB34_12100 2858ed1f5d6019d0f8f52a92083dd22d 317 SUPERFAMILY SSF53850 114 315 2.53E-17 T 11-10-2018 DB34_12100 2858ed1f5d6019d0f8f52a92083dd22d 317 Gene3D G3DSA:1.10.10.10 25 112 2.2E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB34_12100 2858ed1f5d6019d0f8f52a92083dd22d 317 Gene3D G3DSA:3.40.190.10 191 289 1.8E-11 T 11-10-2018 DB34_12100 2858ed1f5d6019d0f8f52a92083dd22d 317 Pfam PF03466 LysR substrate binding domain 113 315 6.9E-17 T 11-10-2018 IPR005119 LysR, substrate-binding DB34_00800 c539c7d9570d4984a3f2e199fa5b5b58 333 Gene3D G3DSA:3.40.1010.20 118 219 4.0E-101 T 11-10-2018 DB34_00800 c539c7d9570d4984a3f2e199fa5b5b58 333 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 23 306 2.3E-93 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 DB34_00800 c539c7d9570d4984a3f2e199fa5b5b58 333 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 22 310 36.337 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 DB34_00800 c539c7d9570d4984a3f2e199fa5b5b58 333 Pfam PF02401 LytB protein 24 306 5.6E-85 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 DB34_00800 c539c7d9570d4984a3f2e199fa5b5b58 333 Gene3D G3DSA:3.40.50.11270 33 117 4.0E-101 T 11-10-2018 DB34_00800 c539c7d9570d4984a3f2e199fa5b5b58 333 Gene3D G3DSA:3.40.1010.20 28 305 4.0E-101 T 11-10-2018 DB34_12000 ae5529e0b22e2f3da0d278fbed4f4857 377 SUPERFAMILY SSF47203 231 358 9.71E-7 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 DB34_12000 ae5529e0b22e2f3da0d278fbed4f4857 377 Gene3D G3DSA:1.10.540.10 25 123 1.3E-11 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 DB34_12000 ae5529e0b22e2f3da0d278fbed4f4857 377 Gene3D G3DSA:2.40.110.10 131 218 6.9E-9 T 11-10-2018 DB34_12000 ae5529e0b22e2f3da0d278fbed4f4857 377 SUPERFAMILY SSF56645 30 221 1.14E-21 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 DB34_12000 ae5529e0b22e2f3da0d278fbed4f4857 377 Gene3D G3DSA:1.20.140.10 219 370 6.3E-10 T 11-10-2018 DB34_04040 c2b4b60527b7b78b9ead169bc9563930 954 Gene3D G3DSA:3.40.50.300 625 947 5.2E-141 T 11-10-2018 DB34_04040 c2b4b60527b7b78b9ead169bc9563930 954 Gene3D G3DSA:1.20.1580.10 704 841 5.2E-141 T 11-10-2018 DB34_04040 c2b4b60527b7b78b9ead169bc9563930 954 Gene3D G3DSA:3.30.190.20 138 247 5.5E-246 T 11-10-2018 DB34_04040 c2b4b60527b7b78b9ead169bc9563930 954 ProSitePatterns PS00211 ABC transporters family signature. 841 855 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB34_04040 c2b4b60527b7b78b9ead169bc9563930 954 Gene3D G3DSA:1.10.8.280 298 413 5.5E-246 T 11-10-2018 DB34_04040 c2b4b60527b7b78b9ead169bc9563930 954 Hamap MF_00205 UvrABC system protein A [uvrA]. 9 951 22.467 T 11-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 DB34_04040 c2b4b60527b7b78b9ead169bc9563930 954 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 12 936 0.0 T 11-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 DB34_04040 c2b4b60527b7b78b9ead169bc9563930 954 Gene3D G3DSA:1.20.1580.10 98 504 5.5E-246 T 11-10-2018 DB34_04040 c2b4b60527b7b78b9ead169bc9563930 954 ProSitePatterns PS00211 ABC transporters family signature. 499 513 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB34_04040 c2b4b60527b7b78b9ead169bc9563930 954 SUPERFAMILY SSF52540 627 921 2.59E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_04040 c2b4b60527b7b78b9ead169bc9563930 954 Gene3D G3DSA:3.40.50.300 14 607 5.5E-246 T 11-10-2018 DB34_04040 c2b4b60527b7b78b9ead169bc9563930 954 SUPERFAMILY SSF52540 12 581 5.0E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_05425 5cc74aa28e646e73e5e8d7b1aa4c1f0d 277 Pfam PF00290 Tryptophan synthase alpha chain 8 254 1.3E-89 T 11-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DB34_05425 5cc74aa28e646e73e5e8d7b1aa4c1f0d 277 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 272 34.638 T 11-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DB34_05425 5cc74aa28e646e73e5e8d7b1aa4c1f0d 277 Gene3D G3DSA:3.20.20.70 1 272 1.4E-97 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB34_05425 5cc74aa28e646e73e5e8d7b1aa4c1f0d 277 SUPERFAMILY SSF51366 2 255 1.79E-86 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 DB34_05425 5cc74aa28e646e73e5e8d7b1aa4c1f0d 277 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 253 5.7E-73 T 11-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DB34_01870 b46d5ae52b03dd790b4651fea63a17ce 506 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 1 495 2.0E-133 T 11-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 DB34_01870 b46d5ae52b03dd790b4651fea63a17ce 506 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 503 178.951 T 11-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 DB34_01870 b46d5ae52b03dd790b4651fea63a17ce 506 SUPERFAMILY SSF52317 259 448 1.39E-39 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like DB34_01870 b46d5ae52b03dd790b4651fea63a17ce 506 Gene3D G3DSA:3.40.50.300 1 235 5.4E-49 T 11-10-2018 DB34_01870 b46d5ae52b03dd790b4651fea63a17ce 506 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 258 441 2.4E-57 T 11-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 DB34_01870 b46d5ae52b03dd790b4651fea63a17ce 506 SUPERFAMILY SSF52540 1 232 6.7E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_01870 b46d5ae52b03dd790b4651fea63a17ce 506 Gene3D G3DSA:3.40.50.880 263 434 2.2E-20 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like DB34_01870 b46d5ae52b03dd790b4651fea63a17ce 506 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 1 231 6.5E-20 T 11-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain DB34_08615 c9f789b25118021a8c2be86f2eac6b54 123 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 7.9E-66 T 11-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_08615 c9f789b25118021a8c2be86f2eac6b54 123 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.846 T 11-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_08615 c9f789b25118021a8c2be86f2eac6b54 123 Gene3D G3DSA:2.40.50.140 1 123 2.1E-62 T 11-10-2018 DB34_08615 c9f789b25118021a8c2be86f2eac6b54 123 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_08615 c9f789b25118021a8c2be86f2eac6b54 123 Pfam PF00164 Ribosomal protein S12/S23 13 123 2.2E-41 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_08615 c9f789b25118021a8c2be86f2eac6b54 123 SUPERFAMILY SSF50249 2 123 2.14E-51 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB34_08615 c9f789b25118021a8c2be86f2eac6b54 123 PRINTS PR01034 Ribosomal protein S12 signature 27 42 2.6E-59 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_08615 c9f789b25118021a8c2be86f2eac6b54 123 PRINTS PR01034 Ribosomal protein S12 signature 58 77 2.6E-59 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_08615 c9f789b25118021a8c2be86f2eac6b54 123 PRINTS PR01034 Ribosomal protein S12 signature 110 122 2.6E-59 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_08615 c9f789b25118021a8c2be86f2eac6b54 123 PRINTS PR01034 Ribosomal protein S12 signature 42 57 2.6E-59 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_08615 c9f789b25118021a8c2be86f2eac6b54 123 PRINTS PR01034 Ribosomal protein S12 signature 94 110 2.6E-59 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_08615 c9f789b25118021a8c2be86f2eac6b54 123 PRINTS PR01034 Ribosomal protein S12 signature 77 94 2.6E-59 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_08615 c9f789b25118021a8c2be86f2eac6b54 123 PIRSF PIRSF002133 1 123 6.5E-54 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_00170 dd28804dd9ad19f057dc2cd62af86a41 200 Gene3D G3DSA:2.40.30.20 1 87 3.7E-22 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DB34_00170 dd28804dd9ad19f057dc2cd62af86a41 200 SUPERFAMILY SSF63380 91 197 3.57E-27 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel DB34_00170 dd28804dd9ad19f057dc2cd62af86a41 200 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 196 5.5E-53 T 11-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DB34_00170 dd28804dd9ad19f057dc2cd62af86a41 200 PIRSF PIRSF000498 1 200 9.6E-63 T 11-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DB34_00170 dd28804dd9ad19f057dc2cd62af86a41 200 Gene3D G3DSA:2.40.30.20 100 200 1.5E-32 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DB34_00170 dd28804dd9ad19f057dc2cd62af86a41 200 Pfam PF00677 Lumazine binding domain 3 85 3.8E-18 T 11-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DB34_00170 dd28804dd9ad19f057dc2cd62af86a41 200 Pfam PF00677 Lumazine binding domain 98 187 2.2E-21 T 11-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DB34_00170 dd28804dd9ad19f057dc2cd62af86a41 200 SUPERFAMILY SSF63380 1 86 7.06E-20 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel DB34_08225 ca7c4099806e76fba4cecf81739cd836 340 Pfam PF01548 Transposase 6 145 2.8E-15 T 11-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 DB34_08225 ca7c4099806e76fba4cecf81739cd836 340 Pfam PF02371 Transposase IS116/IS110/IS902 family 210 285 4.7E-24 T 11-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 DB34_12030 ca7c4099806e76fba4cecf81739cd836 340 Pfam PF01548 Transposase 6 145 2.8E-15 T 11-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 DB34_12030 ca7c4099806e76fba4cecf81739cd836 340 Pfam PF02371 Transposase IS116/IS110/IS902 family 210 285 4.7E-24 T 11-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 DB34_05635 ca7c4099806e76fba4cecf81739cd836 340 Pfam PF01548 Transposase 6 145 2.8E-15 T 11-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 DB34_05635 ca7c4099806e76fba4cecf81739cd836 340 Pfam PF02371 Transposase IS116/IS110/IS902 family 210 285 4.7E-24 T 11-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 DB34_06935 ca7c4099806e76fba4cecf81739cd836 340 Pfam PF01548 Transposase 6 145 2.8E-15 T 11-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 DB34_06935 ca7c4099806e76fba4cecf81739cd836 340 Pfam PF02371 Transposase IS116/IS110/IS902 family 210 285 4.7E-24 T 11-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 DB34_13515 ca7c4099806e76fba4cecf81739cd836 340 Pfam PF01548 Transposase 6 145 2.8E-15 T 11-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 DB34_13515 ca7c4099806e76fba4cecf81739cd836 340 Pfam PF02371 Transposase IS116/IS110/IS902 family 210 285 4.7E-24 T 11-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 DB34_13690 ca7c4099806e76fba4cecf81739cd836 340 Pfam PF01548 Transposase 6 145 2.8E-15 T 11-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 DB34_13690 ca7c4099806e76fba4cecf81739cd836 340 Pfam PF02371 Transposase IS116/IS110/IS902 family 210 285 4.7E-24 T 11-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 DB34_13685 ca7c4099806e76fba4cecf81739cd836 340 Pfam PF01548 Transposase 6 145 2.8E-15 T 11-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 DB34_13685 ca7c4099806e76fba4cecf81739cd836 340 Pfam PF02371 Transposase IS116/IS110/IS902 family 210 285 4.7E-24 T 11-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 DB34_12055 ca7c4099806e76fba4cecf81739cd836 340 Pfam PF01548 Transposase 6 145 2.8E-15 T 11-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 DB34_12055 ca7c4099806e76fba4cecf81739cd836 340 Pfam PF02371 Transposase IS116/IS110/IS902 family 210 285 4.7E-24 T 11-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 DB34_06415 ca7c4099806e76fba4cecf81739cd836 340 Pfam PF01548 Transposase 6 145 2.8E-15 T 11-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 DB34_06415 ca7c4099806e76fba4cecf81739cd836 340 Pfam PF02371 Transposase IS116/IS110/IS902 family 210 285 4.7E-24 T 11-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 DB34_07000 ca7c4099806e76fba4cecf81739cd836 340 Pfam PF01548 Transposase 6 145 2.8E-15 T 11-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 DB34_07000 ca7c4099806e76fba4cecf81739cd836 340 Pfam PF02371 Transposase IS116/IS110/IS902 family 210 285 4.7E-24 T 11-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 DB34_06480 ca7c4099806e76fba4cecf81739cd836 340 Pfam PF01548 Transposase 6 145 2.8E-15 T 11-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 DB34_06480 ca7c4099806e76fba4cecf81739cd836 340 Pfam PF02371 Transposase IS116/IS110/IS902 family 210 285 4.7E-24 T 11-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 DB34_05680 ca7c4099806e76fba4cecf81739cd836 340 Pfam PF01548 Transposase 6 145 2.8E-15 T 11-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 DB34_05680 ca7c4099806e76fba4cecf81739cd836 340 Pfam PF02371 Transposase IS116/IS110/IS902 family 210 285 4.7E-24 T 11-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 DB34_10630 ca7c4099806e76fba4cecf81739cd836 340 Pfam PF01548 Transposase 6 145 2.8E-15 T 11-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 DB34_10630 ca7c4099806e76fba4cecf81739cd836 340 Pfam PF02371 Transposase IS116/IS110/IS902 family 210 285 4.7E-24 T 11-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 DB34_01715 ca7c4099806e76fba4cecf81739cd836 340 Pfam PF01548 Transposase 6 145 2.8E-15 T 11-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 DB34_01715 ca7c4099806e76fba4cecf81739cd836 340 Pfam PF02371 Transposase IS116/IS110/IS902 family 210 285 4.7E-24 T 11-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 DB34_11800 ca7c4099806e76fba4cecf81739cd836 340 Pfam PF01548 Transposase 6 145 2.8E-15 T 11-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 DB34_11800 ca7c4099806e76fba4cecf81739cd836 340 Pfam PF02371 Transposase IS116/IS110/IS902 family 210 285 4.7E-24 T 11-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 DB34_10770 ca7c4099806e76fba4cecf81739cd836 340 Pfam PF01548 Transposase 6 145 2.8E-15 T 11-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 DB34_10770 ca7c4099806e76fba4cecf81739cd836 340 Pfam PF02371 Transposase IS116/IS110/IS902 family 210 285 4.7E-24 T 11-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 DB34_11835 ca7c4099806e76fba4cecf81739cd836 340 Pfam PF01548 Transposase 6 145 2.8E-15 T 11-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 DB34_11835 ca7c4099806e76fba4cecf81739cd836 340 Pfam PF02371 Transposase IS116/IS110/IS902 family 210 285 4.7E-24 T 11-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 DB34_05135 ca7c4099806e76fba4cecf81739cd836 340 Pfam PF01548 Transposase 6 145 2.8E-15 T 11-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 DB34_05135 ca7c4099806e76fba4cecf81739cd836 340 Pfam PF02371 Transposase IS116/IS110/IS902 family 210 285 4.7E-24 T 11-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 DB34_13570 ca7c4099806e76fba4cecf81739cd836 340 Pfam PF01548 Transposase 6 145 2.8E-15 T 11-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 DB34_13570 ca7c4099806e76fba4cecf81739cd836 340 Pfam PF02371 Transposase IS116/IS110/IS902 family 210 285 4.7E-24 T 11-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 DB34_04610 7c56a70eee533c311caf83bf3eed1674 511 SUPERFAMILY SSF47917 381 509 4.71E-45 T 11-10-2018 DB34_04610 7c56a70eee533c311caf83bf3eed1674 511 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 364 373 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DB34_04610 7c56a70eee533c311caf83bf3eed1674 511 SUPERFAMILY SSF50615 10 94 2.17E-26 T 11-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DB34_04610 7c56a70eee533c311caf83bf3eed1674 511 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 27 93 2.7E-16 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DB34_04610 7c56a70eee533c311caf83bf3eed1674 511 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 150 373 2.2E-73 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DB34_04610 7c56a70eee533c311caf83bf3eed1674 511 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 510 50.203 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB34_04610 7c56a70eee533c311caf83bf3eed1674 511 Gene3D G3DSA:3.40.50.300 95 380 5.4E-129 T 11-10-2018 DB34_04610 7c56a70eee533c311caf83bf3eed1674 511 Gene3D G3DSA:1.20.150.20 381 511 3.0E-50 T 11-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB34_04610 7c56a70eee533c311caf83bf3eed1674 511 PIRSF PIRSF039088 1 511 5.2E-274 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB34_04610 7c56a70eee533c311caf83bf3eed1674 511 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 380 505 1.7E-46 T 11-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB34_04610 7c56a70eee533c311caf83bf3eed1674 511 Gene3D G3DSA:2.40.30.20 1 94 2.4E-36 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DB34_04610 7c56a70eee533c311caf83bf3eed1674 511 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 3 510 1.5E-246 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB34_04610 7c56a70eee533c311caf83bf3eed1674 511 SUPERFAMILY SSF52540 97 379 6.16E-101 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_07075 81e866206e173385735f148ccecda092 331 Gene3D G3DSA:3.40.50.970 1 331 5.1E-111 T 11-10-2018 DB34_07075 81e866206e173385735f148ccecda092 331 SUPERFAMILY SSF52518 6 330 4.68E-90 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold DB34_07075 81e866206e173385735f148ccecda092 331 Pfam PF00676 Dehydrogenase E1 component 24 318 1.0E-77 T 11-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 DB34_08080 2cce5d5078a1657bb24a7cc9f57d83b9 541 Gene3D G3DSA:2.30.30.300 190 236 4.3E-69 T 11-10-2018 IPR023386 Lysine-tRNA ligase, insertion domain superfamily GO:0004824 KEGG: 00970+6.1.1.6 DB34_08080 2cce5d5078a1657bb24a7cc9f57d83b9 541 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 51 60 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB34_08080 2cce5d5078a1657bb24a7cc9f57d83b9 541 Gene3D G3DSA:1.10.10.350 444 533 5.2E-16 T 11-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 DB34_08080 2cce5d5078a1657bb24a7cc9f57d83b9 541 SUPERFAMILY SSF48163 338 535 2.62E-35 T 11-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 DB34_08080 2cce5d5078a1657bb24a7cc9f57d83b9 541 Pfam PF01921 tRNA synthetases class I (K) 15 377 2.9E-120 T 11-10-2018 IPR002904 Lysine-tRNA ligase GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 DB34_08080 2cce5d5078a1657bb24a7cc9f57d83b9 541 SUPERFAMILY SSF52374 16 338 2.09E-53 T 11-10-2018 DB34_08080 2cce5d5078a1657bb24a7cc9f57d83b9 541 TIGRFAM TIGR00467 lysS_arch: lysine--tRNA ligase 45 525 2.4E-54 T 11-10-2018 IPR002904 Lysine-tRNA ligase GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 DB34_08080 2cce5d5078a1657bb24a7cc9f57d83b9 541 Gene3D G3DSA:3.40.50.620 38 289 4.3E-69 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DB34_08080 2cce5d5078a1657bb24a7cc9f57d83b9 541 Hamap MF_00177 Lysine--tRNA ligase [lysS]. 14 535 28.846 T 11-10-2018 IPR002904 Lysine-tRNA ligase GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 DB34_05935 0ebc53e5c46c92406f5f9d355e7eece7 653 SUPERFAMILY SSF48435 69 442 1.7E-6 T 11-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 DB34_05935 0ebc53e5c46c92406f5f9d355e7eece7 653 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 477 505 - T 11-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 DB34_05935 0ebc53e5c46c92406f5f9d355e7eece7 653 Pfam PF01464 Transglycosylase SLT domain 468 583 6.7E-19 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 DB34_05935 0ebc53e5c46c92406f5f9d355e7eece7 653 SUPERFAMILY SSF53955 468 628 6.48E-35 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily DB34_05935 0ebc53e5c46c92406f5f9d355e7eece7 653 Gene3D G3DSA:1.10.530.10 464 628 1.3E-33 T 11-10-2018 DB34_03260 51d9159bd7fa7ea3776f3be142e7271c 173 Pfam PF12100 Domain of unknown function (DUF3576) 67 165 3.6E-40 T 11-10-2018 IPR021959 Protein of unknown function DUF3576 DB34_08925 83974b975ebd05841087e496e9255f13 151 Gene3D G3DSA:1.10.10.410 95 151 1.1E-11 T 11-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal DB34_08925 83974b975ebd05841087e496e9255f13 151 Gene3D G3DSA:1.10.1510.10 1 94 5.8E-27 T 11-10-2018 DB34_08925 83974b975ebd05841087e496e9255f13 151 Pfam PF09424 Yqey-like protein 4 150 3.3E-42 T 11-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 DB34_08925 83974b975ebd05841087e496e9255f13 151 SUPERFAMILY SSF89095 1 150 4.08E-32 T 11-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 DB34_09125 117b6bba927a4811ac791d0454f44cea 490 SUPERFAMILY SSF51735 4 287 2.48E-91 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily DB34_09125 117b6bba927a4811ac791d0454f44cea 490 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 223 235 - T 11-10-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 DB34_09125 117b6bba927a4811ac791d0454f44cea 490 Gene3D G3DSA:1.10.1040.10 287 489 1.4E-54 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DB34_09125 117b6bba927a4811ac791d0454f44cea 490 PRINTS PR00084 Mannitol dehydrogenase signature 30 40 2.9E-19 T 11-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 DB34_09125 117b6bba927a4811ac791d0454f44cea 490 PRINTS PR00084 Mannitol dehydrogenase signature 223 236 2.9E-19 T 11-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 DB34_09125 117b6bba927a4811ac791d0454f44cea 490 PRINTS PR00084 Mannitol dehydrogenase signature 184 197 2.9E-19 T 11-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 DB34_09125 117b6bba927a4811ac791d0454f44cea 490 PRINTS PR00084 Mannitol dehydrogenase signature 253 268 2.9E-19 T 11-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 DB34_09125 117b6bba927a4811ac791d0454f44cea 490 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 29 193 8.8E-40 T 11-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 DB34_09125 117b6bba927a4811ac791d0454f44cea 490 SUPERFAMILY SSF48179 288 488 4.42E-47 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DB34_09125 117b6bba927a4811ac791d0454f44cea 490 Gene3D G3DSA:3.40.50.720 3 286 3.6E-106 T 11-10-2018 DB34_09125 117b6bba927a4811ac791d0454f44cea 490 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 221 456 2.4E-64 T 11-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 DB34_08050 1f17ee3fc285897d03183f9c92afd4b9 376 SUPERFAMILY SSF103088 242 375 2.09E-27 T 11-10-2018 IPR036737 OmpA-like domain superfamily DB34_08050 1f17ee3fc285897d03183f9c92afd4b9 376 SUPERFAMILY SSF56925 25 241 1.07E-13 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel DB34_08050 1f17ee3fc285897d03183f9c92afd4b9 376 Gene3D G3DSA:2.40.160.20 24 241 4.2E-16 T 11-10-2018 DB34_08050 1f17ee3fc285897d03183f9c92afd4b9 376 Gene3D G3DSA:3.30.1330.60 261 376 1.3E-26 T 11-10-2018 IPR036737 OmpA-like domain superfamily DB34_08050 1f17ee3fc285897d03183f9c92afd4b9 376 Pfam PF00691 OmpA family 268 369 1.1E-15 T 11-10-2018 IPR006665 OmpA-like domain DB34_11240 34a4183b0d674c6d5fc673acc68c4257 710 Gene3D G3DSA:3.30.365.10 1 709 7.6E-197 T 11-10-2018 DB34_11240 34a4183b0d674c6d5fc673acc68c4257 710 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 536 645 8.6E-26 T 11-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 DB34_11240 34a4183b0d674c6d5fc673acc68c4257 710 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 146 534 8.7E-102 T 11-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 DB34_11240 34a4183b0d674c6d5fc673acc68c4257 710 SMART SM01008 16 122 1.9E-44 T 11-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead DB34_11240 34a4183b0d674c6d5fc673acc68c4257 710 SUPERFAMILY SSF56003 125 707 2.75E-153 T 11-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 DB34_11240 34a4183b0d674c6d5fc673acc68c4257 710 SUPERFAMILY SSF54665 2 140 1.18E-41 T 11-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily DB34_11240 34a4183b0d674c6d5fc673acc68c4257 710 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 16 122 1.5E-26 T 11-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead DB34_02490 b39dab9d7610636ff7677c1d88181593 178 Pfam PF12804 MobA-like NTP transferase domain 10 144 1.1E-18 T 11-10-2018 IPR025877 MobA-like NTP transferase DB34_02490 b39dab9d7610636ff7677c1d88181593 178 SUPERFAMILY SSF53448 1 167 1.24E-11 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB34_02490 b39dab9d7610636ff7677c1d88181593 178 Gene3D G3DSA:3.90.550.10 1 172 8.7E-27 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB34_03600 3c2832c6dc5e053e5bfa66178310a0df 245 Gene3D G3DSA:1.25.40.10 109 245 3.2E-13 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB34_03600 3c2832c6dc5e053e5bfa66178310a0df 245 SUPERFAMILY SSF48452 116 241 3.13E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB34_02515 efe64d9d1c4ef5687185c0b019ac5fe1 378 Pfam PF01571 Aminomethyltransferase folate-binding domain 11 260 5.0E-83 T 11-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain DB34_02515 efe64d9d1c4ef5687185c0b019ac5fe1 378 Gene3D G3DSA:2.40.30.110 289 367 1.9E-23 T 11-10-2018 DB34_02515 efe64d9d1c4ef5687185c0b019ac5fe1 378 Gene3D G3DSA:3.30.1360.120 8 238 3.4E-80 T 11-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 DB34_02515 efe64d9d1c4ef5687185c0b019ac5fe1 378 SUPERFAMILY SSF101790 282 376 1.8E-22 T 11-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal DB34_02515 efe64d9d1c4ef5687185c0b019ac5fe1 378 Gene3D G3DSA:3.30.70.1400 57 146 3.4E-80 T 11-10-2018 DB34_02515 efe64d9d1c4ef5687185c0b019ac5fe1 378 SUPERFAMILY SSF103025 6 290 6.28E-80 T 11-10-2018 DB34_02515 efe64d9d1c4ef5687185c0b019ac5fe1 378 Gene3D G3DSA:4.10.1250.10 239 287 1.4E-20 T 11-10-2018 DB34_02515 efe64d9d1c4ef5687185c0b019ac5fe1 378 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 274 367 4.3E-21 T 11-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 DB34_02515 efe64d9d1c4ef5687185c0b019ac5fe1 378 PIRSF PIRSF006487 2 378 9.9E-76 T 11-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 DB34_02515 efe64d9d1c4ef5687185c0b019ac5fe1 378 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 7 373 1.7E-101 T 11-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 DB34_10000 98880502c10769f9e7c4c61e2c56ad3c 80 Gene3D G3DSA:3.30.1280.10 1 80 3.0E-31 T 11-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DB34_10000 98880502c10769f9e7c4c61e2c56ad3c 80 Pfam PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase 2 78 7.0E-31 T 11-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 DB34_10000 98880502c10769f9e7c4c61e2c56ad3c 80 TIGRFAM TIGR00302 TIGR00302: phosphoribosylformylglycinamidine synthase, purS protein 1 80 7.3E-27 T 11-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 DB34_10000 98880502c10769f9e7c4c61e2c56ad3c 80 SUPERFAMILY SSF82697 1 78 2.79E-27 T 11-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DB34_10000 98880502c10769f9e7c4c61e2c56ad3c 80 Hamap MF_01926 Phosphoribosylformylglycinamidine synthase subunit PurS [purS]. 1 78 21.648 T 11-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 DB34_10000 98880502c10769f9e7c4c61e2c56ad3c 80 ProDom PD010362 PHOSPHORIBOSYLFORMYLGLYCINAMIDINE PURS SYNTHETASE SYNTHASE COMPONENT SYNTHASE LIGASE FGAM UPF0062 I 9 78 2.0E-19 T 11-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 DB34_08875 5427810c54dd334bdd7f325ad10585e9 525 Pfam PF07690 Major Facilitator Superfamily 26 419 5.0E-50 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DB34_08875 5427810c54dd334bdd7f325ad10585e9 525 PRINTS PR01036 Tetracycline resistance protein TetB signature 145 169 6.9E-6 T 11-10-2018 DB34_08875 5427810c54dd334bdd7f325ad10585e9 525 PRINTS PR01036 Tetracycline resistance protein TetB signature 24 48 6.9E-6 T 11-10-2018 DB34_08875 5427810c54dd334bdd7f325ad10585e9 525 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 21 502 8.7E-124 T 11-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 DB34_08875 5427810c54dd334bdd7f325ad10585e9 525 SUPERFAMILY SSF103473 13 512 1.11E-68 T 11-10-2018 IPR036259 MFS transporter superfamily DB34_08875 5427810c54dd334bdd7f325ad10585e9 525 Gene3D G3DSA:1.20.1720.10 21 257 6.4E-51 T 11-10-2018 DB34_07735 d777ba46e43fc27a4defe9ebbc400e21 260 Gene3D G3DSA:3.40.190.80 157 259 6.3E-28 T 11-10-2018 DB34_07735 d777ba46e43fc27a4defe9ebbc400e21 260 Pfam PF00459 Inositol monophosphatase family 13 248 1.3E-48 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DB34_07735 d777ba46e43fc27a4defe9ebbc400e21 260 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 218 232 - T 11-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 DB34_07735 d777ba46e43fc27a4defe9ebbc400e21 260 Gene3D G3DSA:3.30.540.10 6 148 2.5E-39 T 11-10-2018 DB34_07735 d777ba46e43fc27a4defe9ebbc400e21 260 SUPERFAMILY SSF56655 12 254 1.96E-71 T 11-10-2018 DB34_07735 d777ba46e43fc27a4defe9ebbc400e21 260 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 13 259 35.186 T 11-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 DB34_07735 d777ba46e43fc27a4defe9ebbc400e21 260 PRINTS PR00377 Inositol monophosphatase superfamily signature 67 83 5.6E-8 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DB34_07735 d777ba46e43fc27a4defe9ebbc400e21 260 PRINTS PR00377 Inositol monophosphatase superfamily signature 45 65 5.6E-8 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DB34_07735 d777ba46e43fc27a4defe9ebbc400e21 260 PRINTS PR00377 Inositol monophosphatase superfamily signature 90 106 5.6E-8 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DB34_07735 d777ba46e43fc27a4defe9ebbc400e21 260 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 17 257 4.0E-74 T 11-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 DB34_03370 604eb525148363d2c34126329d5ead3c 258 Pfam PF00849 RNA pseudouridylate synthase 72 200 1.3E-12 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 DB34_03370 604eb525148363d2c34126329d5ead3c 258 Pfam PF01479 S4 domain 8 54 1.1E-12 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_03370 604eb525148363d2c34126329d5ead3c 258 SMART SM00363 8 66 1.8E-12 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_03370 604eb525148363d2c34126329d5ead3c 258 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 73 230 2.8E-39 T 11-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 DB34_03370 604eb525148363d2c34126329d5ead3c 258 Gene3D G3DSA:3.30.70.1560 130 220 1.4E-46 T 11-10-2018 DB34_03370 604eb525148363d2c34126329d5ead3c 258 Gene3D G3DSA:3.10.290.10 4 63 1.7E-19 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DB34_03370 604eb525148363d2c34126329d5ead3c 258 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 106 120 - T 11-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 DB34_03370 604eb525148363d2c34126329d5ead3c 258 SUPERFAMILY SSF55120 66 232 7.55E-37 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DB34_03370 604eb525148363d2c34126329d5ead3c 258 Gene3D G3DSA:3.30.70.580 72 225 1.4E-46 T 11-10-2018 DB34_03370 604eb525148363d2c34126329d5ead3c 258 SUPERFAMILY SSF55174 5 69 7.65E-15 T 11-10-2018 DB34_09350 3c6529f5704737c7d9e9928da226d41c 1507 PIRSF PIRSF005719 1014 1504 1.1E-101 T 11-10-2018 IPR024704 Structural maintenance of chromosomes protein DB34_09350 3c6529f5704737c7d9e9928da226d41c 1507 PIRSF PIRSF005719 525 1107 6.9E-24 T 11-10-2018 IPR024704 Structural maintenance of chromosomes protein DB34_09350 3c6529f5704737c7d9e9928da226d41c 1507 PIRSF PIRSF005719 3 533 2.6E-106 T 11-10-2018 IPR024704 Structural maintenance of chromosomes protein DB34_09350 3c6529f5704737c7d9e9928da226d41c 1507 SUPERFAMILY SSF57997 364 517 2.94E-6 T 11-10-2018 DB34_09350 3c6529f5704737c7d9e9928da226d41c 1507 Gene3D G3DSA:3.40.50.300 6 303 1.8E-43 T 11-10-2018 DB34_09350 3c6529f5704737c7d9e9928da226d41c 1507 SUPERFAMILY SSF75553 654 810 7.72E-8 T 11-10-2018 IPR036277 SMCs flexible hinge superfamily GO:0005515|GO:0005524|GO:0005694|GO:0051276 DB34_09350 3c6529f5704737c7d9e9928da226d41c 1507 Gene3D G3DSA:3.40.50.300 1342 1507 1.2E-42 T 11-10-2018 DB34_09350 3c6529f5704737c7d9e9928da226d41c 1507 SMART SM00968 689 777 5.1E-4 T 11-10-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 DB34_09350 3c6529f5704737c7d9e9928da226d41c 1507 Pfam PF02463 RecF/RecN/SMC N terminal domain 7 1489 3.4E-56 T 11-10-2018 IPR003395 RecF/RecN/SMC, N-terminal DB34_09350 3c6529f5704737c7d9e9928da226d41c 1507 Hamap MF_01894 Chromosome partition protein Smc [smc]. 3 1498 19.844 T 11-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 DB34_09350 3c6529f5704737c7d9e9928da226d41c 1507 SUPERFAMILY SSF52540 5 1491 5.47E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_10580 abd6c84b0b242a0863fee7337e276e04 705 SMART SM01060 42 430 1.1E-264 T 11-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DB34_10580 abd6c84b0b242a0863fee7337e276e04 705 Gene3D G3DSA:3.40.50.880 551 704 1.1E-31 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like DB34_10580 abd6c84b0b242a0863fee7337e276e04 705 Gene3D G3DSA:1.20.1370.20 454 550 1.5E-32 T 11-10-2018 DB34_10580 abd6c84b0b242a0863fee7337e276e04 705 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 372 380 - T 11-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DB34_10580 abd6c84b0b242a0863fee7337e276e04 705 PRINTS PR00067 Catalase signature 139 156 1.2E-65 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DB34_10580 abd6c84b0b242a0863fee7337e276e04 705 PRINTS PR00067 Catalase signature 55 78 1.2E-65 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DB34_10580 abd6c84b0b242a0863fee7337e276e04 705 PRINTS PR00067 Catalase signature 158 176 1.2E-65 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DB34_10580 abd6c84b0b242a0863fee7337e276e04 705 PRINTS PR00067 Catalase signature 359 385 1.2E-65 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DB34_10580 abd6c84b0b242a0863fee7337e276e04 705 PRINTS PR00067 Catalase signature 118 136 1.2E-65 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DB34_10580 abd6c84b0b242a0863fee7337e276e04 705 PRINTS PR00067 Catalase signature 327 354 1.2E-65 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DB34_10580 abd6c84b0b242a0863fee7337e276e04 705 Gene3D G3DSA:2.40.180.10 2 451 2.9E-201 T 11-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 DB34_10580 abd6c84b0b242a0863fee7337e276e04 705 SUPERFAMILY SSF56634 35 533 4.71E-211 T 11-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DB34_10580 abd6c84b0b242a0863fee7337e276e04 705 Pfam PF00199 Catalase 42 426 4.6E-177 T 11-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DB34_10580 abd6c84b0b242a0863fee7337e276e04 705 ProSitePatterns PS00438 Catalase proximal active site signature. 78 94 - T 11-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DB34_10580 abd6c84b0b242a0863fee7337e276e04 705 PIRSF PIRSF038927 9 705 2.7E-302 T 11-10-2018 IPR024712 Catalase, mono-functional, haem-containing, clade 2 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 DB34_10580 abd6c84b0b242a0863fee7337e276e04 705 Pfam PF06628 Catalase-related immune-responsive 457 520 1.8E-20 T 11-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DB34_10580 abd6c84b0b242a0863fee7337e276e04 705 SUPERFAMILY SSF52317 556 701 7.12E-18 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like DB34_04070 e1c448483f243f100310d8bf415f0709 230 Gene3D G3DSA:3.30.420.40 5 143 4.4E-19 T 11-10-2018 DB34_04070 e1c448483f243f100310d8bf415f0709 230 Pfam PF00814 Glycoprotease family 41 142 1.0E-12 T 11-10-2018 IPR000905 Gcp-like domain DB34_04070 e1c448483f243f100310d8bf415f0709 230 SUPERFAMILY SSF53067 16 115 3.37E-13 T 11-10-2018 DB34_04070 e1c448483f243f100310d8bf415f0709 230 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 23 213 2.9E-25 T 11-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 DB34_08560 6cabdc1e834b50f8101031fe15d556b6 243 SMART SM00448 20 131 6.2E-30 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB34_08560 6cabdc1e834b50f8101031fe15d556b6 243 Pfam PF00486 Transcriptional regulatory protein, C terminal 164 239 2.6E-24 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DB34_08560 6cabdc1e834b50f8101031fe15d556b6 243 SUPERFAMILY SSF52172 18 198 4.73E-36 T 11-10-2018 IPR011006 CheY-like superfamily DB34_08560 6cabdc1e834b50f8101031fe15d556b6 243 SMART SM00862 164 239 4.4E-25 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DB34_08560 6cabdc1e834b50f8101031fe15d556b6 243 Pfam PF00072 Response regulator receiver domain 22 132 1.8E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB34_08560 6cabdc1e834b50f8101031fe15d556b6 243 Gene3D G3DSA:3.40.50.2300 5 140 2.2E-35 T 11-10-2018 DB34_08560 6cabdc1e834b50f8101031fe15d556b6 243 Gene3D G3DSA:1.10.10.10 141 243 6.9E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB34_05050 61ff30b897221d3a8c351481cb6c256d 247 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 22 218 3.5E-20 T 11-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 DB34_05050 61ff30b897221d3a8c351481cb6c256d 247 Pfam PF02358 Trehalose-phosphatase 23 224 3.9E-32 T 11-10-2018 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 DB34_05050 61ff30b897221d3a8c351481cb6c256d 247 TIGRFAM TIGR00685 T6PP: trehalose-phosphatase 20 223 2.6E-37 T 11-10-2018 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 DB34_05050 61ff30b897221d3a8c351481cb6c256d 247 Gene3D G3DSA:3.30.70.1020 103 177 1.1E-41 T 11-10-2018 DB34_05050 61ff30b897221d3a8c351481cb6c256d 247 Gene3D G3DSA:3.40.50.1000 23 225 1.1E-41 T 11-10-2018 IPR023214 HAD superfamily DB34_05050 61ff30b897221d3a8c351481cb6c256d 247 SUPERFAMILY SSF56784 21 224 5.86E-37 T 11-10-2018 IPR036412 HAD-like superfamily DB34_09265 01322742d78586fd15462976c4dd5937 316 Pfam PF07549 SecD/SecF GG Motif 38 64 1.2E-6 T 11-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site DB34_09265 01322742d78586fd15462976c4dd5937 316 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 44 289 7.2E-76 T 11-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 DB34_09265 01322742d78586fd15462976c4dd5937 316 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 16 300 26.298 T 11-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 DB34_09265 01322742d78586fd15462976c4dd5937 316 Gene3D G3DSA:1.20.1640.10 106 306 1.8E-14 T 11-10-2018 DB34_09265 01322742d78586fd15462976c4dd5937 316 SUPERFAMILY SSF82866 84 300 2.35E-39 T 11-10-2018 DB34_09265 01322742d78586fd15462976c4dd5937 316 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 123 286 1.7E-50 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial DB34_09265 01322742d78586fd15462976c4dd5937 316 PRINTS PR01755 Bacterial translocase SecF protein signature 237 252 3.4E-28 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial DB34_09265 01322742d78586fd15462976c4dd5937 316 PRINTS PR01755 Bacterial translocase SecF protein signature 205 223 3.4E-28 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial DB34_09265 01322742d78586fd15462976c4dd5937 316 PRINTS PR01755 Bacterial translocase SecF protein signature 43 58 3.4E-28 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial DB34_09265 01322742d78586fd15462976c4dd5937 316 PRINTS PR01755 Bacterial translocase SecF protein signature 157 171 3.4E-28 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial DB34_09265 01322742d78586fd15462976c4dd5937 316 Pfam PF02355 Protein export membrane protein 114 298 4.6E-63 T 11-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial DB34_09880 4114418b3e34a5237c1e15e72bc80198 249 Gene3D G3DSA:3.40.190.100 81 187 5.6E-23 T 11-10-2018 DB34_09880 4114418b3e34a5237c1e15e72bc80198 249 SUPERFAMILY SSF53850 4 241 1.09E-23 T 11-10-2018 DB34_09880 4114418b3e34a5237c1e15e72bc80198 249 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 3 241 4.3E-24 T 11-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 DB34_09880 4114418b3e34a5237c1e15e72bc80198 249 Gene3D G3DSA:3.40.190.10 6 242 5.6E-23 T 11-10-2018 DB34_04250 aef7ce8d2f772dc170f4455154d14179 367 SUPERFAMILY SSF51556 42 336 7.48E-82 T 11-10-2018 IPR032466 Metal-dependent hydrolase DB34_04250 aef7ce8d2f772dc170f4455154d14179 367 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 34 361 9.5E-72 T 11-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 DB34_04250 aef7ce8d2f772dc170f4455154d14179 367 Gene3D G3DSA:2.30.40.10 31 364 7.0E-108 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DB34_04250 aef7ce8d2f772dc170f4455154d14179 367 PIRSF PIRSF038994 8 367 1.8E-99 T 11-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 DB34_04250 aef7ce8d2f772dc170f4455154d14179 367 SUPERFAMILY SSF51338 337 366 5.1E-8 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DB34_04250 aef7ce8d2f772dc170f4455154d14179 367 Gene3D G3DSA:3.20.20.140 42 337 7.0E-108 T 11-10-2018 DB34_04250 aef7ce8d2f772dc170f4455154d14179 367 Pfam PF01979 Amidohydrolase family 38 364 1.4E-18 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 DB34_05695 cb71c78e29868a177a282c6c8a25f585 278 SUPERFAMILY SSF53448 49 216 5.44E-22 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB34_05695 cb71c78e29868a177a282c6c8a25f585 278 Gene3D G3DSA:3.90.550.20 53 218 7.2E-10 T 11-10-2018 DB34_05695 cb71c78e29868a177a282c6c8a25f585 278 Pfam PF04488 Glycosyltransferase sugar-binding region containing DXD motif 68 147 7.8E-11 T 11-10-2018 IPR007577 Glycosyltransferase, DXD sugar-binding motif DB34_09085 6f5fd24c3973e994ccc68eace2888e5f 611 Gene3D G3DSA:3.40.50.12740 13 170 3.7E-17 T 11-10-2018 DB34_09085 6f5fd24c3973e994ccc68eace2888e5f 611 Gene3D G3DSA:3.40.50.2300 179 326 1.0E-8 T 11-10-2018 DB34_09085 6f5fd24c3973e994ccc68eace2888e5f 611 Gene3D G3DSA:1.10.287.130 327 426 2.2E-19 T 11-10-2018 DB34_09085 6f5fd24c3973e994ccc68eace2888e5f 611 SUPERFAMILY SSF52172 184 302 1.42E-7 T 11-10-2018 IPR011006 CheY-like superfamily DB34_09085 6f5fd24c3973e994ccc68eace2888e5f 611 Gene3D G3DSA:3.30.565.10 434 608 8.2E-37 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB34_09085 6f5fd24c3973e994ccc68eace2888e5f 611 SMART SM00387 471 601 6.0E-25 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB34_09085 6f5fd24c3973e994ccc68eace2888e5f 611 SUPERFAMILY SSF52172 10 133 2.56E-14 T 11-10-2018 IPR011006 CheY-like superfamily DB34_09085 6f5fd24c3973e994ccc68eace2888e5f 611 SMART SM00388 349 431 3.9E-4 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DB34_09085 6f5fd24c3973e994ccc68eace2888e5f 611 PRINTS PR00344 Bacterial sensor protein C-terminal signature 585 598 4.3E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB34_09085 6f5fd24c3973e994ccc68eace2888e5f 611 PRINTS PR00344 Bacterial sensor protein C-terminal signature 560 578 4.3E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB34_09085 6f5fd24c3973e994ccc68eace2888e5f 611 PRINTS PR00344 Bacterial sensor protein C-terminal signature 547 557 4.3E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB34_09085 6f5fd24c3973e994ccc68eace2888e5f 611 PRINTS PR00344 Bacterial sensor protein C-terminal signature 529 543 4.3E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB34_09085 6f5fd24c3973e994ccc68eace2888e5f 611 SUPERFAMILY SSF55874 417 600 1.83E-34 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB34_09085 6f5fd24c3973e994ccc68eace2888e5f 611 SUPERFAMILY SSF47384 344 432 4.51E-7 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DB34_09085 6f5fd24c3973e994ccc68eace2888e5f 611 Pfam PF00072 Response regulator receiver domain 26 111 1.2E-5 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB34_09085 6f5fd24c3973e994ccc68eace2888e5f 611 Pfam PF00512 His Kinase A (phospho-acceptor) domain 349 431 4.7E-10 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DB34_09085 6f5fd24c3973e994ccc68eace2888e5f 611 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 477 599 1.4E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB34_01905 797d82cfae6dc4596eb66742068cd972 172 Gene3D G3DSA:1.10.10.10 12 169 1.2E-29 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB34_01905 797d82cfae6dc4596eb66742068cd972 172 SMART SM00347 54 155 1.4E-17 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DB34_01905 797d82cfae6dc4596eb66742068cd972 172 Pfam PF01047 MarR family 78 119 4.6E-11 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DB34_01905 797d82cfae6dc4596eb66742068cd972 172 SUPERFAMILY SSF46785 31 168 5.09E-29 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB34_01905 797d82cfae6dc4596eb66742068cd972 172 PRINTS PR00598 Bacterial regulatory protein MarR family signature 115 131 3.9E-9 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DB34_01905 797d82cfae6dc4596eb66742068cd972 172 PRINTS PR00598 Bacterial regulatory protein MarR family signature 79 95 3.9E-9 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DB34_01905 797d82cfae6dc4596eb66742068cd972 172 PRINTS PR00598 Bacterial regulatory protein MarR family signature 96 111 3.9E-9 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DB34_07430 d78dc19036b9d4b6035b42f8c16edc53 130 ProSitePatterns PS00935 Glyoxalase I signature 2. 71 83 - T 11-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 DB34_07430 d78dc19036b9d4b6035b42f8c16edc53 130 ProSitePatterns PS00934 Glyoxalase I signature 1. 6 26 - T 11-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 DB34_07430 d78dc19036b9d4b6035b42f8c16edc53 130 Gene3D G3DSA:3.10.180.10 1 130 4.3E-40 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DB34_07430 d78dc19036b9d4b6035b42f8c16edc53 130 SUPERFAMILY SSF54593 3 128 2.34E-30 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DB34_07430 d78dc19036b9d4b6035b42f8c16edc53 130 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 3 129 7.5E-52 T 11-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 DB34_07430 d78dc19036b9d4b6035b42f8c16edc53 130 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 125 6.6E-17 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DB34_09690 673fb9e86d92411d6632f6842ab62501 331 Gene3D G3DSA:1.10.530.10 80 327 3.7E-83 T 11-10-2018 DB34_09690 673fb9e86d92411d6632f6842ab62501 331 Pfam PF13406 Transglycosylase SLT domain 39 328 1.3E-96 T 11-10-2018 IPR031304 Transglycosylase SLT domain 2 DB34_09690 673fb9e86d92411d6632f6842ab62501 331 Gene3D G3DSA:1.10.8.350 52 213 3.7E-83 T 11-10-2018 DB34_09690 673fb9e86d92411d6632f6842ab62501 331 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 37 330 9.0E-101 T 11-10-2018 IPR011970 Lytic murein transglycosylase DB34_09690 673fb9e86d92411d6632f6842ab62501 331 SUPERFAMILY SSF53955 25 330 1.28E-87 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily DB34_01925 8f754e7e2289a853bf44b799bf8bf3c5 167 SMART SM00903 13 158 9.8E-52 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 DB34_01925 8f754e7e2289a853bf44b799bf8bf3c5 167 SUPERFAMILY SSF50475 9 160 1.37E-44 T 11-10-2018 DB34_01925 8f754e7e2289a853bf44b799bf8bf3c5 167 Gene3D G3DSA:2.30.110.10 3 162 1.9E-44 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 DB34_01925 8f754e7e2289a853bf44b799bf8bf3c5 167 Pfam PF01613 Flavin reductase like domain 13 159 5.0E-32 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 DB34_07950 5b7a2daf2d2f6c8c70c77f60b3a2d0af 957 Gene3D G3DSA:3.40.50.12470 570 817 1.3E-169 T 11-10-2018 DB34_07950 5b7a2daf2d2f6c8c70c77f60b3a2d0af 957 SUPERFAMILY SSF52518 124 549 3.24E-79 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold DB34_07950 5b7a2daf2d2f6c8c70c77f60b3a2d0af 957 PIRSF PIRSF000157 2 953 0.0 T 11-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 DB34_07950 5b7a2daf2d2f6c8c70c77f60b3a2d0af 957 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 805 951 3.9E-52 T 11-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 DB34_07950 5b7a2daf2d2f6c8c70c77f60b3a2d0af 957 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 11 950 0.0 T 11-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 DB34_07950 5b7a2daf2d2f6c8c70c77f60b3a2d0af 957 Pfam PF00676 Dehydrogenase E1 component 221 538 2.0E-60 T 11-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 DB34_07950 5b7a2daf2d2f6c8c70c77f60b3a2d0af 957 Gene3D G3DSA:1.10.287.1150 87 172 1.9E-23 T 11-10-2018 DB34_07950 5b7a2daf2d2f6c8c70c77f60b3a2d0af 957 SUPERFAMILY SSF52518 591 805 1.01E-47 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold DB34_07950 5b7a2daf2d2f6c8c70c77f60b3a2d0af 957 Gene3D G3DSA:3.40.50.970 173 541 6.4E-146 T 11-10-2018 DB34_07950 5b7a2daf2d2f6c8c70c77f60b3a2d0af 957 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 9 47 9.7E-13 T 11-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 DB34_07950 5b7a2daf2d2f6c8c70c77f60b3a2d0af 957 SMART SM00861 607 800 2.1E-55 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DB34_07950 5b7a2daf2d2f6c8c70c77f60b3a2d0af 957 Pfam PF02779 Transketolase, pyrimidine binding domain 607 801 2.9E-62 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DB34_07950 5b7a2daf2d2f6c8c70c77f60b3a2d0af 957 Gene3D G3DSA:3.40.50.11610 737 948 1.3E-169 T 11-10-2018 DB34_05485 aad0eaa55c1da8b270ce5f0f389c0786 440 Pfam PF01595 Domain of unknown function DUF21 10 202 7.6E-37 T 11-10-2018 IPR002550 CNNM, transmembrane domain DB34_05485 aad0eaa55c1da8b270ce5f0f389c0786 440 Gene3D G3DSA:3.30.465.10 358 438 4.0E-26 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 DB34_05485 aad0eaa55c1da8b270ce5f0f389c0786 440 SUPERFAMILY SSF54631 204 345 1.42E-22 T 11-10-2018 DB34_05485 aad0eaa55c1da8b270ce5f0f389c0786 440 Pfam PF00571 CBS domain 293 344 1.1E-6 T 11-10-2018 IPR000644 CBS domain DB34_05485 aad0eaa55c1da8b270ce5f0f389c0786 440 SMART SM01091 357 437 5.3E-26 T 11-10-2018 IPR005170 Transporter-associated domain DB34_05485 aad0eaa55c1da8b270ce5f0f389c0786 440 SUPERFAMILY SSF56176 355 438 2.18E-19 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 DB34_05485 aad0eaa55c1da8b270ce5f0f389c0786 440 Pfam PF03471 Transporter associated domain 358 435 3.3E-21 T 11-10-2018 IPR005170 Transporter-associated domain DB34_05485 aad0eaa55c1da8b270ce5f0f389c0786 440 Gene3D G3DSA:3.10.580.10 199 357 6.4E-33 T 11-10-2018 DB34_01745 ce37171ad6ec6328f80ded5aa56a7639 227 Gene3D G3DSA:4.10.860.20 180 227 1.1E-15 T 11-10-2018 DB34_01745 ce37171ad6ec6328f80ded5aa56a7639 227 SMART SM00702 1 177 5.7E-20 T 11-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 DB34_01745 ce37171ad6ec6328f80ded5aa56a7639 227 SUPERFAMILY SSF51197 3 176 2.33E-6 T 11-10-2018 DB34_01745 ce37171ad6ec6328f80ded5aa56a7639 227 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 84 176 2.5E-12 T 11-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 DB34_01745 ce37171ad6ec6328f80ded5aa56a7639 227 Hamap MF_00657 PKHD-type hydroxylase YbiX [ybiX]. 1 227 42.302 T 11-10-2018 IPR023550 PKHD-type hydroxylase GO:0016706|GO:0055114 DB34_01745 ce37171ad6ec6328f80ded5aa56a7639 227 Gene3D G3DSA:2.60.120.620 1 178 4.5E-41 T 11-10-2018 DB34_09790 bda3a97b7adcf54ed6ab8f36a44b06f9 264 SUPERFAMILY SSF52402 2 201 6.58E-54 T 11-10-2018 DB34_09790 bda3a97b7adcf54ed6ab8f36a44b06f9 264 PIRSF PIRSF002936 202 264 2.4E-18 T 11-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 DB34_09790 bda3a97b7adcf54ed6ab8f36a44b06f9 264 PIRSF PIRSF002936 1 206 1.6E-81 T 11-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 DB34_09790 bda3a97b7adcf54ed6ab8f36a44b06f9 264 Gene3D G3DSA:3.40.50.620 2 203 6.1E-52 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DB34_09790 bda3a97b7adcf54ed6ab8f36a44b06f9 264 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 25 217 1.9E-37 T 11-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 DB34_03640 5ef13e76e55184660f4bbc4fcf28f7c4 202 Pfam PF14520 Helix-hairpin-helix domain 72 130 3.2E-14 T 11-10-2018 DB34_03640 5ef13e76e55184660f4bbc4fcf28f7c4 202 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 186 5.7E-39 T 11-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 DB34_03640 5ef13e76e55184660f4bbc4fcf28f7c4 202 SMART SM00278 73 92 11.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DB34_03640 5ef13e76e55184660f4bbc4fcf28f7c4 202 SMART SM00278 108 127 31.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DB34_03640 5ef13e76e55184660f4bbc4fcf28f7c4 202 SMART SM00278 157 176 2000.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DB34_03640 5ef13e76e55184660f4bbc4fcf28f7c4 202 Pfam PF01330 RuvA N terminal domain 1 62 1.3E-16 T 11-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 DB34_03640 5ef13e76e55184660f4bbc4fcf28f7c4 202 Gene3D G3DSA:2.40.50.140 1 66 2.1E-21 T 11-10-2018 DB34_03640 5ef13e76e55184660f4bbc4fcf28f7c4 202 SUPERFAMILY SSF46929 154 201 2.75E-6 T 11-10-2018 IPR036267 RuvA, C-terminal domain superfamily DB34_03640 5ef13e76e55184660f4bbc4fcf28f7c4 202 Gene3D G3DSA:1.10.150.20 67 137 1.2E-22 T 11-10-2018 DB34_03640 5ef13e76e55184660f4bbc4fcf28f7c4 202 SUPERFAMILY SSF47781 66 134 4.25E-20 T 11-10-2018 IPR010994 RuvA domain 2-like DB34_03640 5ef13e76e55184660f4bbc4fcf28f7c4 202 SUPERFAMILY SSF50249 1 63 3.43E-15 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB34_03640 5ef13e76e55184660f4bbc4fcf28f7c4 202 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 201 28.054 T 11-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 DB34_03640 5ef13e76e55184660f4bbc4fcf28f7c4 202 Pfam PF07499 RuvA, C-terminal domain 155 200 1.2E-9 T 11-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 DB34_03640 5ef13e76e55184660f4bbc4fcf28f7c4 202 Gene3D G3DSA:1.10.8.10 152 200 2.8E-8 T 11-10-2018 DB34_03855 bcc5ab3100a44db01914ff088386aa26 443 SUPERFAMILY SSF116878 128 443 5.1E-43 T 11-10-2018 DB34_03855 bcc5ab3100a44db01914ff088386aa26 443 Gene3D G3DSA:3.30.1360.120 2 128 9.5E-41 T 11-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 DB34_03855 bcc5ab3100a44db01914ff088386aa26 443 SUPERFAMILY SSF52540 80 362 1.22E-38 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_03855 bcc5ab3100a44db01914ff088386aa26 443 Pfam PF10396 GTP-binding protein TrmE N-terminus 11 127 1.2E-36 T 11-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 DB34_03855 bcc5ab3100a44db01914ff088386aa26 443 Gene3D G3DSA:3.40.50.300 224 374 1.6E-93 T 11-10-2018 DB34_03855 bcc5ab3100a44db01914ff088386aa26 443 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 19 443 5.0E-83 T 11-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 DB34_03855 bcc5ab3100a44db01914ff088386aa26 443 Pfam PF01926 50S ribosome-binding GTPase 226 314 1.5E-18 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 DB34_03855 bcc5ab3100a44db01914ff088386aa26 443 Pfam PF12631 MnmE helical domain 130 440 4.5E-51 T 11-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 DB34_03855 bcc5ab3100a44db01914ff088386aa26 443 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 10 443 29.718 T 11-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 DB34_03855 bcc5ab3100a44db01914ff088386aa26 443 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 227 314 1.5E-14 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DB34_03855 bcc5ab3100a44db01914ff088386aa26 443 Gene3D G3DSA:1.20.120.430 129 443 1.6E-93 T 11-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 DB34_00980 bf11cc3464a34fd296741cf7d1970ecf 571 Gene3D G3DSA:3.30.465.10 105 267 9.3E-71 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 DB34_00980 bf11cc3464a34fd296741cf7d1970ecf 571 Gene3D G3DSA:3.30.43.10 2 100 1.5E-11 T 11-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 DB34_00980 bf11cc3464a34fd296741cf7d1970ecf 571 Hamap MF_02092 Quinone-dependent D-lactate dehydrogenase [dld]. 9 567 59.591 T 11-10-2018 IPR012256 D-lactate dehydrogenase GO:0005887|GO:0016901|GO:0019516|GO:0022904|GO:0050660 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 DB34_00980 bf11cc3464a34fd296741cf7d1970ecf 571 Pfam PF09330 D-lactate dehydrogenase, membrane binding 277 566 9.8E-142 T 11-10-2018 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 DB34_00980 bf11cc3464a34fd296741cf7d1970ecf 571 SUPERFAMILY SSF55103 274 566 1.44E-109 T 11-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 DB34_00980 bf11cc3464a34fd296741cf7d1970ecf 571 PIRSF PIRSF000101 3 568 7.6E-281 T 11-10-2018 IPR012256 D-lactate dehydrogenase GO:0005887|GO:0016901|GO:0019516|GO:0022904|GO:0050660 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 DB34_00980 bf11cc3464a34fd296741cf7d1970ecf 571 Gene3D G3DSA:3.30.70.610 268 343 2.3E-17 T 11-10-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 DB34_00980 bf11cc3464a34fd296741cf7d1970ecf 571 Gene3D G3DSA:3.30.70.610 364 433 8.1E-16 T 11-10-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 DB34_00980 bf11cc3464a34fd296741cf7d1970ecf 571 SUPERFAMILY SSF56176 9 270 5.14E-67 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 DB34_00980 bf11cc3464a34fd296741cf7d1970ecf 571 Pfam PF01565 FAD binding domain 46 165 3.1E-7 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 DB34_00980 bf11cc3464a34fd296741cf7d1970ecf 571 Gene3D G3DSA:3.30.1370.20 434 518 7.4E-38 T 11-10-2018 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 DB34_07080 5cf564f13129ea5882062d88ddcec0f4 342 Pfam PF02780 Transketolase, C-terminal domain 204 326 1.8E-41 T 11-10-2018 IPR033248 Transketolase, C-terminal domain DB34_07080 5cf564f13129ea5882062d88ddcec0f4 342 SUPERFAMILY SSF52518 2 214 3.48E-68 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold DB34_07080 5cf564f13129ea5882062d88ddcec0f4 342 Gene3D G3DSA:3.40.50.920 203 335 5.6E-45 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DB34_07080 5cf564f13129ea5882062d88ddcec0f4 342 Pfam PF02779 Transketolase, pyrimidine binding domain 5 189 2.9E-55 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DB34_07080 5cf564f13129ea5882062d88ddcec0f4 342 SMART SM00861 4 190 3.7E-66 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DB34_07080 5cf564f13129ea5882062d88ddcec0f4 342 SUPERFAMILY SSF52922 199 333 2.36E-41 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DB34_07080 5cf564f13129ea5882062d88ddcec0f4 342 Gene3D G3DSA:3.40.50.970 1 202 1.3E-85 T 11-10-2018 DB34_07315 448db58a01ec6a3843c5757d8dda0b45 439 SMART SM00490 260 341 4.0E-33 T 11-10-2018 IPR001650 Helicase, C-terminal DB34_07315 448db58a01ec6a3843c5757d8dda0b45 439 Pfam PF00271 Helicase conserved C-terminal domain 233 341 1.8E-27 T 11-10-2018 IPR001650 Helicase, C-terminal DB34_07315 448db58a01ec6a3843c5757d8dda0b45 439 Pfam PF00270 DEAD/DEAH box helicase 26 197 2.3E-47 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DB34_07315 448db58a01ec6a3843c5757d8dda0b45 439 Gene3D G3DSA:3.40.50.300 1 211 1.9E-78 T 11-10-2018 DB34_07315 448db58a01ec6a3843c5757d8dda0b45 439 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site DB34_07315 448db58a01ec6a3843c5757d8dda0b45 439 SUPERFAMILY SSF52540 75 362 7.29E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_07315 448db58a01ec6a3843c5757d8dda0b45 439 Gene3D G3DSA:3.40.50.300 215 384 4.3E-49 T 11-10-2018 DB34_07315 448db58a01ec6a3843c5757d8dda0b45 439 SMART SM00487 21 223 6.3E-61 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DB34_08105 3ad14eaf1de3126f8c4243a1c9d7d4b1 357 PRINTS PR00151 Porphobilinogen deaminase signature 83 103 5.7E-30 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DB34_08105 3ad14eaf1de3126f8c4243a1c9d7d4b1 357 PRINTS PR00151 Porphobilinogen deaminase signature 275 292 5.7E-30 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DB34_08105 3ad14eaf1de3126f8c4243a1c9d7d4b1 357 PRINTS PR00151 Porphobilinogen deaminase signature 188 205 5.7E-30 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DB34_08105 3ad14eaf1de3126f8c4243a1c9d7d4b1 357 PRINTS PR00151 Porphobilinogen deaminase signature 114 133 5.7E-30 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DB34_08105 3ad14eaf1de3126f8c4243a1c9d7d4b1 357 Gene3D G3DSA:3.40.190.10 40 254 2.8E-73 T 11-10-2018 DB34_08105 3ad14eaf1de3126f8c4243a1c9d7d4b1 357 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 276 292 - T 11-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DB34_08105 3ad14eaf1de3126f8c4243a1c9d7d4b1 357 Gene3D G3DSA:3.40.190.10 141 247 2.8E-73 T 11-10-2018 DB34_08105 3ad14eaf1de3126f8c4243a1c9d7d4b1 357 Gene3D G3DSA:3.30.160.40 267 356 5.9E-23 T 11-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DB34_08105 3ad14eaf1de3126f8c4243a1c9d7d4b1 357 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 40 347 6.5E-90 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DB34_08105 3ad14eaf1de3126f8c4243a1c9d7d4b1 357 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 40 258 5.9E-68 T 11-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DB34_08105 3ad14eaf1de3126f8c4243a1c9d7d4b1 357 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 273 346 7.9E-15 T 11-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DB34_08105 3ad14eaf1de3126f8c4243a1c9d7d4b1 357 SUPERFAMILY SSF53850 39 264 6.51E-66 T 11-10-2018 DB34_08105 3ad14eaf1de3126f8c4243a1c9d7d4b1 357 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 39 348 33.736 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DB34_08105 3ad14eaf1de3126f8c4243a1c9d7d4b1 357 SUPERFAMILY SSF54782 266 356 1.83E-18 T 11-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DB34_08105 3ad14eaf1de3126f8c4243a1c9d7d4b1 357 PIRSF PIRSF001438 15 357 2.6E-105 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DB34_12655 f7d18dcfeb2c877b50c185889d9c094f 460 SMART SM00304 200 252 1.0E-5 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DB34_12655 f7d18dcfeb2c877b50c185889d9c094f 460 Gene3D G3DSA:3.30.565.10 321 459 8.6E-27 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB34_12655 f7d18dcfeb2c877b50c185889d9c094f 460 Pfam PF00512 His Kinase A (phospho-acceptor) domain 255 319 4.9E-10 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DB34_12655 f7d18dcfeb2c877b50c185889d9c094f 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 407 7.8E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB34_12655 f7d18dcfeb2c877b50c185889d9c094f 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 446 459 7.8E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB34_12655 f7d18dcfeb2c877b50c185889d9c094f 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 440 7.8E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB34_12655 f7d18dcfeb2c877b50c185889d9c094f 460 SMART SM00387 359 460 2.7E-22 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB34_12655 f7d18dcfeb2c877b50c185889d9c094f 460 SUPERFAMILY SSF47384 237 318 1.96E-13 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DB34_12655 f7d18dcfeb2c877b50c185889d9c094f 460 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 362 459 2.8E-16 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB34_12655 f7d18dcfeb2c877b50c185889d9c094f 460 SUPERFAMILY SSF55874 328 459 2.1E-28 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB34_12655 f7d18dcfeb2c877b50c185889d9c094f 460 Gene3D G3DSA:1.10.287.130 204 320 1.2E-18 T 11-10-2018 DB34_12655 f7d18dcfeb2c877b50c185889d9c094f 460 SMART SM00388 253 320 4.2E-9 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DB34_09410 a0c26231e0d5649bc36ac451a9f04026 189 Pfam PF01066 CDP-alcohol phosphatidyltransferase 5 71 1.7E-15 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 DB34_09410 a0c26231e0d5649bc36ac451a9f04026 189 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 DB34_09410 a0c26231e0d5649bc36ac451a9f04026 189 Gene3D G3DSA:1.20.120.1760 5 130 1.6E-17 T 11-10-2018 DB34_09410 a0c26231e0d5649bc36ac451a9f04026 189 PIRSF PIRSF000847 1 189 5.7E-42 T 11-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 DB34_09410 a0c26231e0d5649bc36ac451a9f04026 189 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 182 1.8E-39 T 11-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 DB34_03845 2fbe668cbcc32e3b66c769984b47fce3 198 SUPERFAMILY SSF53335 8 174 3.88E-30 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB34_03845 2fbe668cbcc32e3b66c769984b47fce3 198 Gene3D G3DSA:3.40.50.150 5 193 6.7E-51 T 11-10-2018 DB34_03845 2fbe668cbcc32e3b66c769984b47fce3 198 Pfam PF02527 rRNA small subunit methyltransferase G 15 175 1.7E-41 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 DB34_03845 2fbe668cbcc32e3b66c769984b47fce3 198 PIRSF PIRSF003078 3 194 6.7E-43 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 DB34_03845 2fbe668cbcc32e3b66c769984b47fce3 198 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 7 190 24.474 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 DB34_03845 2fbe668cbcc32e3b66c769984b47fce3 198 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 19 173 3.1E-40 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 DB34_07240 9ded6f1ebb9c6171bafa9886c49d7e24 338 SUPERFAMILY SSF51905 8 316 4.75E-42 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_07240 9ded6f1ebb9c6171bafa9886c49d7e24 338 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 113 121 6.3E-26 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DB34_07240 9ded6f1ebb9c6171bafa9886c49d7e24 338 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 66 76 6.3E-26 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DB34_07240 9ded6f1ebb9c6171bafa9886c49d7e24 338 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 281 299 6.3E-26 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DB34_07240 9ded6f1ebb9c6171bafa9886c49d7e24 338 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 153 177 6.3E-26 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DB34_07240 9ded6f1ebb9c6171bafa9886c49d7e24 338 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 9 31 6.3E-26 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DB34_07240 9ded6f1ebb9c6171bafa9886c49d7e24 338 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 9 298 1.9E-27 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DB34_07240 9ded6f1ebb9c6171bafa9886c49d7e24 338 Gene3D G3DSA:3.50.50.60 9 313 4.3E-95 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_07240 9ded6f1ebb9c6171bafa9886c49d7e24 338 Gene3D G3DSA:3.50.50.60 128 251 4.3E-95 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_07240 9ded6f1ebb9c6171bafa9886c49d7e24 338 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 271 293 3.2E-21 T 11-10-2018 DB34_07240 9ded6f1ebb9c6171bafa9886c49d7e24 338 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 3.2E-21 T 11-10-2018 DB34_07240 9ded6f1ebb9c6171bafa9886c49d7e24 338 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 112 130 3.2E-21 T 11-10-2018 DB34_07240 9ded6f1ebb9c6171bafa9886c49d7e24 338 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 157 175 3.2E-21 T 11-10-2018 DB34_07240 9ded6f1ebb9c6171bafa9886c49d7e24 338 Hamap MF_01685 Ferredoxin--NADP reductase. 7 334 40.013 T 11-10-2018 IPR022890 Ferredoxin--NADP reductase, type 2 GO:0004324|GO:0055114 KEGG: 00195+1.18.1.2|MetaCyc: PWY-101 DB34_08310 6e11b868674d5d553d89a348a29afc5f 288 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 17 283 2.6E-74 T 11-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 DB34_08310 6e11b868674d5d553d89a348a29afc5f 288 SUPERFAMILY SSF53223 11 116 3.63E-33 T 11-10-2018 DB34_08310 6e11b868674d5d553d89a348a29afc5f 288 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 134 231 1.4E-8 T 11-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase DB34_08310 6e11b868674d5d553d89a348a29afc5f 288 SUPERFAMILY SSF51735 117 284 2.32E-40 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily DB34_08310 6e11b868674d5d553d89a348a29afc5f 288 Gene3D G3DSA:3.40.50.10860 19 276 2.8E-80 T 11-10-2018 DB34_08310 6e11b868674d5d553d89a348a29afc5f 288 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 16 285 32.735 T 11-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 DB34_08310 6e11b868674d5d553d89a348a29afc5f 288 Gene3D G3DSA:3.40.50.720 116 253 2.8E-80 T 11-10-2018 DB34_08310 6e11b868674d5d553d89a348a29afc5f 288 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 21 103 1.5E-26 T 11-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 DB34_03900 eb4b4ec6d7335877aeca550e94ceaedb 233 Gene3D G3DSA:1.10.150.240 30 96 1.8E-48 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DB34_03900 eb4b4ec6d7335877aeca550e94ceaedb 233 Gene3D G3DSA:3.40.50.1000 18 211 1.8E-48 T 11-10-2018 IPR023214 HAD superfamily DB34_03900 eb4b4ec6d7335877aeca550e94ceaedb 233 Pfam PF13419 Haloacid dehalogenase-like hydrolase 18 197 5.1E-28 T 11-10-2018 DB34_03900 eb4b4ec6d7335877aeca550e94ceaedb 233 SUPERFAMILY SSF56784 15 225 3.93E-44 T 11-10-2018 IPR036412 HAD-like superfamily DB34_03900 eb4b4ec6d7335877aeca550e94ceaedb 233 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 64 197 4.7E-14 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DB34_02130 8b9bae59d16ec704d9a227f1f79922bf 340 Gene3D G3DSA:3.40.50.1980 23 336 6.8E-66 T 11-10-2018 DB34_02130 8b9bae59d16ec704d9a227f1f79922bf 340 SUPERFAMILY SSF53807 32 338 1.26E-49 T 11-10-2018 DB34_02130 8b9bae59d16ec704d9a227f1f79922bf 340 Pfam PF01497 Periplasmic binding protein 60 271 1.0E-11 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain DB34_12710 19f97bf8c07988be83b308ede03dfe74 180 Gene3D G3DSA:2.40.30.60 4 91 5.1E-12 T 11-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 DB34_12710 19f97bf8c07988be83b308ede03dfe74 180 SUPERFAMILY SSF50346 97 161 3.06E-10 T 11-10-2018 IPR011033 PRC-barrel-like superfamily DB34_12710 19f97bf8c07988be83b308ede03dfe74 180 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 6 161 9.4E-29 T 11-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 DB34_12710 19f97bf8c07988be83b308ede03dfe74 180 Gene3D G3DSA:2.30.30.240 93 166 1.9E-7 T 11-10-2018 DB34_12710 19f97bf8c07988be83b308ede03dfe74 180 SUPERFAMILY SSF50447 5 91 3.88E-11 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DB34_12710 19f97bf8c07988be83b308ede03dfe74 180 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 5 162 18.915 T 11-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 DB34_12710 19f97bf8c07988be83b308ede03dfe74 180 Pfam PF01782 RimM N-terminal domain 8 87 2.8E-10 T 11-10-2018 IPR002676 RimM, N-terminal GO:0006364 DB34_12770 c54fa2c005da15cefc17c48665937a38 463 SUPERFAMILY SSF103473 18 451 5.75E-60 T 11-10-2018 IPR036259 MFS transporter superfamily DB34_12770 c54fa2c005da15cefc17c48665937a38 463 Pfam PF07690 Major Facilitator Superfamily 28 418 9.5E-45 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DB34_12770 c54fa2c005da15cefc17c48665937a38 463 Gene3D G3DSA:1.20.1720.10 25 226 5.2E-37 T 11-10-2018 DB34_12770 c54fa2c005da15cefc17c48665937a38 463 PRINTS PR01036 Tetracycline resistance protein TetB signature 118 138 3.2E-8 T 11-10-2018 DB34_12770 c54fa2c005da15cefc17c48665937a38 463 PRINTS PR01036 Tetracycline resistance protein TetB signature 27 51 3.2E-8 T 11-10-2018 DB34_12770 c54fa2c005da15cefc17c48665937a38 463 PRINTS PR01036 Tetracycline resistance protein TetB signature 148 172 3.2E-8 T 11-10-2018 DB34_12770 c54fa2c005da15cefc17c48665937a38 463 PRINTS PR01036 Tetracycline resistance protein TetB signature 275 300 3.2E-8 T 11-10-2018 DB34_12770 c54fa2c005da15cefc17c48665937a38 463 Gene3D G3DSA:1.20.1250.20 268 460 1.0E-19 T 11-10-2018 DB34_00910 b809dc6daa143c9b7dc2aad6cedbd22b 374 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 39 369 1.7E-66 T 11-10-2018 IPR006427 Phage portal protein, HK97 DB34_00910 b809dc6daa143c9b7dc2aad6cedbd22b 374 Gene3D G3DSA:3.30.1120.70 202 252 9.4E-6 T 11-10-2018 DB34_00910 b809dc6daa143c9b7dc2aad6cedbd22b 374 Gene3D G3DSA:2.40.500.30 56 312 9.4E-6 T 11-10-2018 DB34_00910 b809dc6daa143c9b7dc2aad6cedbd22b 374 Pfam PF04860 Phage portal protein 39 365 2.7E-83 T 11-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein DB34_00910 b809dc6daa143c9b7dc2aad6cedbd22b 374 Gene3D G3DSA:1.20.1270.210 42 307 9.4E-6 T 11-10-2018 DB34_12570 de455fce7e21cbab257bba949640ba5e 373 SUPERFAMILY SSF53448 15 227 5.63E-34 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB34_12570 de455fce7e21cbab257bba949640ba5e 373 Pfam PF04138 GtrA-like protein 256 371 1.2E-17 T 11-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 DB34_12570 de455fce7e21cbab257bba949640ba5e 373 Gene3D G3DSA:3.90.550.10 2 246 2.5E-41 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB34_12570 de455fce7e21cbab257bba949640ba5e 373 Pfam PF00535 Glycosyl transferase family 2 19 182 5.1E-28 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DB34_12835 d294b4409f972ac53ee21ea57e16db37 416 Pfam PF13546 DDE superfamily endonuclease 57 237 5.0E-44 T 11-10-2018 IPR038721 Transposase IS701-like, DDE domain DB34_12835 d294b4409f972ac53ee21ea57e16db37 416 SUPERFAMILY SSF53098 71 404 3.19E-28 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily DB34_13755 d294b4409f972ac53ee21ea57e16db37 416 Pfam PF13546 DDE superfamily endonuclease 57 237 5.0E-44 T 11-10-2018 IPR038721 Transposase IS701-like, DDE domain DB34_13755 d294b4409f972ac53ee21ea57e16db37 416 SUPERFAMILY SSF53098 71 404 3.19E-28 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily DB34_13765 d294b4409f972ac53ee21ea57e16db37 416 Pfam PF13546 DDE superfamily endonuclease 57 237 5.0E-44 T 11-10-2018 IPR038721 Transposase IS701-like, DDE domain DB34_13765 d294b4409f972ac53ee21ea57e16db37 416 SUPERFAMILY SSF53098 71 404 3.19E-28 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily DB34_07015 d294b4409f972ac53ee21ea57e16db37 416 Pfam PF13546 DDE superfamily endonuclease 57 237 5.0E-44 T 11-10-2018 IPR038721 Transposase IS701-like, DDE domain DB34_07015 d294b4409f972ac53ee21ea57e16db37 416 SUPERFAMILY SSF53098 71 404 3.19E-28 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily DB34_11255 d294b4409f972ac53ee21ea57e16db37 416 Pfam PF13546 DDE superfamily endonuclease 57 237 5.0E-44 T 11-10-2018 IPR038721 Transposase IS701-like, DDE domain DB34_11255 d294b4409f972ac53ee21ea57e16db37 416 SUPERFAMILY SSF53098 71 404 3.19E-28 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily DB34_10515 d294b4409f972ac53ee21ea57e16db37 416 Pfam PF13546 DDE superfamily endonuclease 57 237 5.0E-44 T 11-10-2018 IPR038721 Transposase IS701-like, DDE domain DB34_10515 d294b4409f972ac53ee21ea57e16db37 416 SUPERFAMILY SSF53098 71 404 3.19E-28 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily DB34_13390 d294b4409f972ac53ee21ea57e16db37 416 Pfam PF13546 DDE superfamily endonuclease 57 237 5.0E-44 T 11-10-2018 IPR038721 Transposase IS701-like, DDE domain DB34_13390 d294b4409f972ac53ee21ea57e16db37 416 SUPERFAMILY SSF53098 71 404 3.19E-28 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily DB34_13735 d294b4409f972ac53ee21ea57e16db37 416 Pfam PF13546 DDE superfamily endonuclease 57 237 5.0E-44 T 11-10-2018 IPR038721 Transposase IS701-like, DDE domain DB34_13735 d294b4409f972ac53ee21ea57e16db37 416 SUPERFAMILY SSF53098 71 404 3.19E-28 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily DB34_04925 aee30af24f65317d21236b45f2bf16bd 175 SUPERFAMILY SSF50324 6 172 3.92E-66 T 11-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 DB34_04925 aee30af24f65317d21236b45f2bf16bd 175 Gene3D G3DSA:3.90.80.10 1 173 1.4E-70 T 11-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 DB34_04925 aee30af24f65317d21236b45f2bf16bd 175 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 173 36.712 T 11-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 DB34_04925 aee30af24f65317d21236b45f2bf16bd 175 Pfam PF00719 Inorganic pyrophosphatase 18 172 3.0E-56 T 11-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 DB34_00350 b8c968b6037042c04d9895d88835d997 352 SUPERFAMILY SSF53474 82 348 3.19E-65 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold DB34_00350 b8c968b6037042c04d9895d88835d997 352 Gene3D G3DSA:3.40.50.1820 53 349 6.7E-78 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold DB34_00350 b8c968b6037042c04d9895d88835d997 352 ProSitePatterns PS01174 Lipolytic enzymes "G-D-X-G" family, putative serine active site. 192 204 - T 11-10-2018 IPR033140 Lipase, GDXG, putative serine active site DB34_00350 b8c968b6037042c04d9895d88835d997 352 Pfam PF07859 alpha/beta hydrolase fold 122 326 5.9E-65 T 11-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 DB34_06955 0e100186ce09675c8d517bc158ffba91 301 Pfam PF01842 ACT domain 24 82 1.0E-8 T 11-10-2018 IPR002912 ACT domain DB34_06955 0e100186ce09675c8d517bc158ffba91 301 SUPERFAMILY SSF53328 106 300 5.36E-58 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DB34_06955 0e100186ce09675c8d517bc158ffba91 301 PIRSF PIRSF036480 20 301 5.6E-104 T 11-10-2018 DB34_06955 0e100186ce09675c8d517bc158ffba91 301 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 24 300 6.8E-97 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DB34_06955 0e100186ce09675c8d517bc158ffba91 301 SUPERFAMILY SSF55021 21 102 9.54E-17 T 11-10-2018 DB34_06955 0e100186ce09675c8d517bc158ffba91 301 Pfam PF00551 Formyl transferase 106 282 6.7E-38 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DB34_06955 0e100186ce09675c8d517bc158ffba91 301 Gene3D G3DSA:3.30.70.260 16 103 1.5E-25 T 11-10-2018 DB34_06955 0e100186ce09675c8d517bc158ffba91 301 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 252 274 6.0E-46 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DB34_06955 0e100186ce09675c8d517bc158ffba91 301 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 25 51 6.0E-46 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DB34_06955 0e100186ce09675c8d517bc158ffba91 301 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 128 155 6.0E-46 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DB34_06955 0e100186ce09675c8d517bc158ffba91 301 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 106 128 6.0E-46 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DB34_06955 0e100186ce09675c8d517bc158ffba91 301 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 274 299 6.0E-46 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DB34_06955 0e100186ce09675c8d517bc158ffba91 301 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 57 69 6.0E-46 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DB34_06955 0e100186ce09675c8d517bc158ffba91 301 Gene3D G3DSA:3.40.50.170 105 301 1.0E-68 T 11-10-2018 DB34_06955 0e100186ce09675c8d517bc158ffba91 301 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 20 300 43.997 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DB34_03650 81f6181a5f02f0470f8ce6fc8393de66 249 Gene3D G3DSA:1.10.10.200 1 80 9.0E-32 T 11-10-2018 IPR017856 Integrase-like, N-terminal DB34_03650 81f6181a5f02f0470f8ce6fc8393de66 249 SUPERFAMILY SSF75625 3 246 3.14E-93 T 11-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB34_03650 81f6181a5f02f0470f8ce6fc8393de66 249 Pfam PF01709 Transcriptional regulator 5 237 4.6E-94 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB34_03650 81f6181a5f02f0470f8ce6fc8393de66 249 Gene3D G3DSA:3.30.70.980 133 205 1.0E-54 T 11-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB34_03650 81f6181a5f02f0470f8ce6fc8393de66 249 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 34.659 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB34_03650 81f6181a5f02f0470f8ce6fc8393de66 249 Gene3D G3DSA:3.30.70.980 84 236 1.0E-54 T 11-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB34_03650 81f6181a5f02f0470f8ce6fc8393de66 249 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 237 3.0E-97 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB34_09875 67d15a7ec02d11299693392447a70e73 419 Pfam PF13847 Methyltransferase domain 64 165 3.4E-17 T 11-10-2018 IPR025714 Methyltransferase domain DB34_09875 67d15a7ec02d11299693392447a70e73 419 SUPERFAMILY SSF53335 58 261 6.44E-30 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB34_12560 c3b49d702235cd7477db9d40bae006c7 331 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 140 311 1.4E-69 T 11-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 DB34_12560 c3b49d702235cd7477db9d40bae006c7 331 TIGRFAM TIGR01380 glut_syn: glutathione synthase 5 327 8.0E-119 T 11-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 DB34_12560 c3b49d702235cd7477db9d40bae006c7 331 SUPERFAMILY SSF52440 5 137 7.77E-37 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily DB34_12560 c3b49d702235cd7477db9d40bae006c7 331 SUPERFAMILY SSF56059 140 327 8.05E-57 T 11-10-2018 DB34_12560 c3b49d702235cd7477db9d40bae006c7 331 Gene3D G3DSA:3.30.1490.20 153 217 8.7E-103 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 DB34_12560 c3b49d702235cd7477db9d40bae006c7 331 Gene3D G3DSA:3.40.50.20 11 130 8.7E-103 T 11-10-2018 DB34_12560 c3b49d702235cd7477db9d40bae006c7 331 Hamap MF_00162 Glutathione synthetase [gshB]. 1 331 149.481 T 11-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 DB34_12560 c3b49d702235cd7477db9d40bae006c7 331 Gene3D G3DSA:3.30.470.20 131 310 8.7E-103 T 11-10-2018 DB34_12560 c3b49d702235cd7477db9d40bae006c7 331 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 5 136 1.6E-41 T 11-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 DB34_05330 c89708abf1ec27fd4d4744bc5661e894 395 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 7 105 1.3E-35 T 11-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DB34_05330 c89708abf1ec27fd4d4744bc5661e894 395 SUPERFAMILY SSF55973 6 113 3.57E-36 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DB34_05330 c89708abf1ec27fd4d4744bc5661e894 395 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 264 272 - T 11-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DB34_05330 c89708abf1ec27fd4d4744bc5661e894 395 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 238 382 1.5E-61 T 11-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DB34_05330 c89708abf1ec27fd4d4744bc5661e894 395 Gene3D G3DSA:3.30.300.10 8 238 5.3E-154 T 11-10-2018 DB34_05330 c89708abf1ec27fd4d4744bc5661e894 395 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 120 130 - T 11-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DB34_05330 c89708abf1ec27fd4d4744bc5661e894 395 Gene3D G3DSA:3.30.300.10 14 275 5.3E-154 T 11-10-2018 DB34_05330 c89708abf1ec27fd4d4744bc5661e894 395 SUPERFAMILY SSF55973 116 237 2.47E-40 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DB34_05330 c89708abf1ec27fd4d4744bc5661e894 395 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 5 393 47.484 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DB34_05330 c89708abf1ec27fd4d4744bc5661e894 395 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 8 392 1.2E-144 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DB34_05330 c89708abf1ec27fd4d4744bc5661e894 395 PIRSF PIRSF000497 1 394 2.9E-152 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DB34_05330 c89708abf1ec27fd4d4744bc5661e894 395 Gene3D G3DSA:3.30.300.10 106 384 5.3E-154 T 11-10-2018 DB34_05330 c89708abf1ec27fd4d4744bc5661e894 395 Pfam PF02772 S-adenosylmethionine synthetase, central domain 119 236 4.9E-35 T 11-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DB34_05330 c89708abf1ec27fd4d4744bc5661e894 395 SUPERFAMILY SSF55973 238 393 6.67E-62 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DB34_03430 161653402ea3964feeafb62fbf20ab03 422 SUPERFAMILY SSF55174 311 417 1.91E-14 T 11-10-2018 DB34_03430 161653402ea3964feeafb62fbf20ab03 422 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 50 72 7.1E-26 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 DB34_03430 161653402ea3964feeafb62fbf20ab03 422 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 224 236 7.1E-26 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 DB34_03430 161653402ea3964feeafb62fbf20ab03 422 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 170 185 7.1E-26 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 DB34_03430 161653402ea3964feeafb62fbf20ab03 422 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 191 213 7.1E-26 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 DB34_03430 161653402ea3964feeafb62fbf20ab03 422 Gene3D G3DSA:3.40.50.620 1 230 5.1E-85 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DB34_03430 161653402ea3964feeafb62fbf20ab03 422 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 12 417 1.7E-108 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 DB34_03430 161653402ea3964feeafb62fbf20ab03 422 Gene3D G3DSA:3.10.290.10 330 418 3.7E-16 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DB34_03430 161653402ea3964feeafb62fbf20ab03 422 Pfam PF00579 tRNA synthetases class I (W and Y) 35 329 5.3E-76 T 11-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB34_03430 161653402ea3964feeafb62fbf20ab03 422 Gene3D G3DSA:1.10.240.10 231 329 7.4E-29 T 11-10-2018 DB34_03430 161653402ea3964feeafb62fbf20ab03 422 SUPERFAMILY SSF52374 10 328 1.97E-92 T 11-10-2018 DB34_03430 161653402ea3964feeafb62fbf20ab03 422 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 8 418 42.486 T 11-10-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 DB34_07545 d740d29448948f5a64cdeded65745509 280 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 33 104 4.7E-12 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 DB34_07545 d740d29448948f5a64cdeded65745509 280 SMART SM00967 33 109 2.4E-12 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 DB34_07545 d740d29448948f5a64cdeded65745509 280 SUPERFAMILY SSF55315 29 103 5.65E-12 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like DB34_07545 d740d29448948f5a64cdeded65745509 280 Gene3D G3DSA:3.30.1330.30 24 107 6.9E-7 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like DB34_07545 d740d29448948f5a64cdeded65745509 280 Pfam PF00588 SpoU rRNA Methylase family 121 260 2.2E-35 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 DB34_07545 d740d29448948f5a64cdeded65745509 280 Gene3D G3DSA:3.40.1280.10 110 266 1.8E-45 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DB34_07545 d740d29448948f5a64cdeded65745509 280 SUPERFAMILY SSF75217 97 267 5.23E-41 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases DB34_07545 d740d29448948f5a64cdeded65745509 280 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 34 264 2.6E-52 T 11-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 DB34_04160 08d586e93f18327adc4f511eff128215 157 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 96 109 - T 11-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DB34_04160 08d586e93f18327adc4f511eff128215 157 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 20 135 2.7E-32 T 11-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DB34_04160 08d586e93f18327adc4f511eff128215 157 SUPERFAMILY SSF81343 19 137 8.07E-29 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DB34_04160 08d586e93f18327adc4f511eff128215 157 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 19 133 2.4E-24 T 11-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DB34_04160 08d586e93f18327adc4f511eff128215 157 Gene3D G3DSA:1.20.1300.10 17 141 4.4E-38 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DB34_04160 08d586e93f18327adc4f511eff128215 157 PIRSF PIRSF000178 7 140 2.2E-32 T 11-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DB34_09450 fbb2e0b5b90b2cd29cb35a1046bc9e3f 216 SUPERFAMILY SSF51306 92 214 1.52E-32 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily DB34_09450 fbb2e0b5b90b2cd29cb35a1046bc9e3f 216 Pfam PF01726 LexA DNA binding domain 2 63 2.3E-15 T 11-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 DB34_09450 fbb2e0b5b90b2cd29cb35a1046bc9e3f 216 Gene3D G3DSA:2.10.109.10 98 216 2.4E-37 T 11-10-2018 DB34_09450 fbb2e0b5b90b2cd29cb35a1046bc9e3f 216 SUPERFAMILY SSF46785 2 68 5.8E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB34_09450 fbb2e0b5b90b2cd29cb35a1046bc9e3f 216 Gene3D G3DSA:1.10.10.10 1 68 6.9E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB34_09450 fbb2e0b5b90b2cd29cb35a1046bc9e3f 216 TIGRFAM TIGR00498 lexA: repressor LexA 2 215 4.9E-54 T 11-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 DB34_09450 fbb2e0b5b90b2cd29cb35a1046bc9e3f 216 Pfam PF00717 Peptidase S24-like 132 199 2.3E-12 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C DB34_09450 fbb2e0b5b90b2cd29cb35a1046bc9e3f 216 Hamap MF_00015 LexA repressor [lexA]. 1 216 32.803 T 11-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 DB34_09450 fbb2e0b5b90b2cd29cb35a1046bc9e3f 216 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 169 181 1.7E-9 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 DB34_09450 fbb2e0b5b90b2cd29cb35a1046bc9e3f 216 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 129 139 1.7E-9 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 DB34_09450 fbb2e0b5b90b2cd29cb35a1046bc9e3f 216 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 140 151 1.7E-9 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 DB34_09325 3fde354bcad28e15bf4dd8cb65174e2e 174 Gene3D G3DSA:3.40.50.1240 1 174 5.9E-40 T 11-10-2018 IPR029033 Histidine phosphatase superfamily DB34_09325 3fde354bcad28e15bf4dd8cb65174e2e 174 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 75 4.6E-10 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DB34_09325 3fde354bcad28e15bf4dd8cb65174e2e 174 SUPERFAMILY SSF53254 1 147 6.38E-25 T 11-10-2018 IPR029033 Histidine phosphatase superfamily DB34_09325 3fde354bcad28e15bf4dd8cb65174e2e 174 SMART SM00855 3 121 2.0E-9 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DB34_01335 1c5f2a8ed0b9473758a29c0b6ba92e5a 599 SMART SM01016 7 93 1.1E-29 T 11-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DB34_01335 1c5f2a8ed0b9473758a29c0b6ba92e5a 599 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 26 598 2.9E-113 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 DB34_01335 1c5f2a8ed0b9473758a29c0b6ba92e5a 599 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 11 93 3.3E-19 T 11-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DB34_01335 1c5f2a8ed0b9473758a29c0b6ba92e5a 599 Gene3D G3DSA:3.30.1360.70 6 118 1.2E-20 T 11-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 DB34_01335 1c5f2a8ed0b9473758a29c0b6ba92e5a 599 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 372 449 8.5E-6 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB34_01335 1c5f2a8ed0b9473758a29c0b6ba92e5a 599 Pfam PF00750 tRNA synthetases class I (R) 103 178 5.8E-10 T 11-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 DB34_01335 1c5f2a8ed0b9473758a29c0b6ba92e5a 599 SUPERFAMILY SSF52374 118 478 1.29E-78 T 11-10-2018 DB34_01335 1c5f2a8ed0b9473758a29c0b6ba92e5a 599 Hamap MF_00123 Arginine--tRNA ligase [argS]. 7 598 24.132 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 DB34_01335 1c5f2a8ed0b9473758a29c0b6ba92e5a 599 Gene3D G3DSA:1.10.730.10 462 598 5.2E-138 T 11-10-2018 DB34_01335 1c5f2a8ed0b9473758a29c0b6ba92e5a 599 SMART SM00836 467 598 3.4E-55 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 DB34_01335 1c5f2a8ed0b9473758a29c0b6ba92e5a 599 Gene3D G3DSA:3.40.50.620 122 461 5.2E-138 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DB34_01335 1c5f2a8ed0b9473758a29c0b6ba92e5a 599 SUPERFAMILY SSF55190 7 113 1.44E-20 T 11-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 DB34_01335 1c5f2a8ed0b9473758a29c0b6ba92e5a 599 SUPERFAMILY SSF47323 461 598 3.79E-33 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB34_01335 1c5f2a8ed0b9473758a29c0b6ba92e5a 599 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 132 141 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB34_01335 1c5f2a8ed0b9473758a29c0b6ba92e5a 599 Pfam PF05746 DALR anticodon binding domain 467 598 1.4E-31 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 DB34_01335 1c5f2a8ed0b9473758a29c0b6ba92e5a 599 PRINTS PR01038 Arginyl-tRNA synthetase signature 122 137 5.7E-23 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 DB34_01335 1c5f2a8ed0b9473758a29c0b6ba92e5a 599 PRINTS PR01038 Arginyl-tRNA synthetase signature 137 153 5.7E-23 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 DB34_01335 1c5f2a8ed0b9473758a29c0b6ba92e5a 599 PRINTS PR01038 Arginyl-tRNA synthetase signature 336 357 5.7E-23 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 DB34_01335 1c5f2a8ed0b9473758a29c0b6ba92e5a 599 PRINTS PR01038 Arginyl-tRNA synthetase signature 161 174 5.7E-23 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 DB34_05815 5b95ab5aa2d63a9459bb787b21790b99 140 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 29 125 1.1E-32 T 11-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS DB34_05815 5b95ab5aa2d63a9459bb787b21790b99 140 Pfam PF02410 Ribosomal silencing factor during starvation 31 125 2.5E-26 T 11-10-2018 DB34_05815 5b95ab5aa2d63a9459bb787b21790b99 140 SUPERFAMILY SSF81301 27 127 1.01E-33 T 11-10-2018 DB34_05815 5b95ab5aa2d63a9459bb787b21790b99 140 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 24 126 23.909 T 11-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS DB34_05815 5b95ab5aa2d63a9459bb787b21790b99 140 Gene3D G3DSA:3.30.460.10 23 137 1.6E-36 T 11-10-2018 DB34_04965 82264ce543ea9d6ffecefea9a67419f1 356 Pfam PF08331 Domain of unknown function (DUF1730) 61 143 2.4E-22 T 11-10-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 DB34_04965 82264ce543ea9d6ffecefea9a67419f1 356 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 12 349 2.1E-136 T 11-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 DB34_04965 82264ce543ea9d6ffecefea9a67419f1 356 Pfam PF13484 4Fe-4S double cluster binding domain 196 259 1.1E-17 T 11-10-2018 DB34_04965 82264ce543ea9d6ffecefea9a67419f1 356 SUPERFAMILY SSF46548 142 259 5.75E-17 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DB34_04965 82264ce543ea9d6ffecefea9a67419f1 356 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 196 207 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DB34_04965 82264ce543ea9d6ffecefea9a67419f1 356 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 5 318 44.415 T 11-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 DB34_01505 e27772100f0638d46b2c5af6130b91c9 501 Pfam PF00324 Amino acid permease 32 462 4.0E-103 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 DB34_01505 e27772100f0638d46b2c5af6130b91c9 501 PIRSF PIRSF006060 7 478 3.6E-55 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DB34_01505 e27772100f0638d46b2c5af6130b91c9 501 Gene3D G3DSA:1.20.1740.10 23 482 6.9E-52 T 11-10-2018 DB34_04140 02497fad02c56c3738b3d3f86c4eb292 471 Gene3D G3DSA:3.40.50.1220 284 468 6.9E-80 T 11-10-2018 DB34_04140 02497fad02c56c3738b3d3f86c4eb292 471 SUPERFAMILY SSF52467 292 466 4.38E-69 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily DB34_04140 02497fad02c56c3738b3d3f86c4eb292 471 PIRSF PIRSF000204 2 467 6.8E-148 T 11-10-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 DB34_04140 02497fad02c56c3738b3d3f86c4eb292 471 Pfam PF02233 NAD(P) transhydrogenase beta subunit 10 463 8.5E-168 T 11-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 DB34_00055 ad0f79e07c3e1ed9da88999d7b951f49 330 Pfam PF00293 NUDIX domain 205 325 2.8E-20 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DB34_00055 ad0f79e07c3e1ed9da88999d7b951f49 330 Pfam PF13302 Acetyltransferase (GNAT) domain 16 155 8.0E-32 T 11-10-2018 IPR000182 GNAT domain DB34_00055 ad0f79e07c3e1ed9da88999d7b951f49 330 SUPERFAMILY SSF55811 191 326 1.03E-39 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DB34_00055 ad0f79e07c3e1ed9da88999d7b951f49 330 Gene3D G3DSA:3.90.79.10 199 330 7.5E-41 T 11-10-2018 DB34_00055 ad0f79e07c3e1ed9da88999d7b951f49 330 TIGRFAM TIGR00586 mutt: mutator mutT protein 199 326 9.0E-31 T 11-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 DB34_00055 ad0f79e07c3e1ed9da88999d7b951f49 330 PRINTS PR00502 NUDIX hydrolase family signature 245 260 6.0E-9 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 DB34_00055 ad0f79e07c3e1ed9da88999d7b951f49 330 PRINTS PR00502 NUDIX hydrolase family signature 231 245 6.0E-9 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 DB34_00055 ad0f79e07c3e1ed9da88999d7b951f49 330 Gene3D G3DSA:3.40.630.30 3 198 1.1E-40 T 11-10-2018 DB34_00055 ad0f79e07c3e1ed9da88999d7b951f49 330 SUPERFAMILY SSF55729 7 177 1.19E-41 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase DB34_00055 ad0f79e07c3e1ed9da88999d7b951f49 330 ProSitePatterns PS00893 Nudix box signature. 236 257 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 DB34_04380 4533036e8a9d098134d8576add2b24cf 642 Gene3D G3DSA:3.90.1310.30 67 254 1.4E-34 T 11-10-2018 DB34_04380 4533036e8a9d098134d8576add2b24cf 642 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 29 617 3.5E-210 T 11-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DB34_04380 4533036e8a9d098134d8576add2b24cf 642 SUPERFAMILY SSF56601 259 624 7.27E-98 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DB34_04380 4533036e8a9d098134d8576add2b24cf 642 Pfam PF00905 Penicillin binding protein transpeptidase domain 277 613 2.9E-75 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 DB34_04380 4533036e8a9d098134d8576add2b24cf 642 Pfam PF03717 Penicillin-binding Protein dimerisation domain 75 244 4.5E-38 T 11-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 DB34_04380 4533036e8a9d098134d8576add2b24cf 642 Gene3D G3DSA:3.40.710.10 255 622 2.2E-100 T 11-10-2018 DB34_04380 4533036e8a9d098134d8576add2b24cf 642 SUPERFAMILY SSF56519 66 258 7.19E-42 T 11-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 DB34_09570 97c77e24e90d7a5a77d5f91de8ef8276 469 Gene3D G3DSA:3.30.310.50 371 456 1.4E-24 T 11-10-2018 DB34_09570 97c77e24e90d7a5a77d5f91de8ef8276 469 SUPERFAMILY SSF53738 259 366 4.32E-32 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DB34_09570 97c77e24e90d7a5a77d5f91de8ef8276 469 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 12 131 1.1E-29 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DB34_09570 97c77e24e90d7a5a77d5f91de8ef8276 469 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 206 219 7.6E-20 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DB34_09570 97c77e24e90d7a5a77d5f91de8ef8276 469 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 235 250 7.6E-20 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DB34_09570 97c77e24e90d7a5a77d5f91de8ef8276 469 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 99 113 7.6E-20 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DB34_09570 97c77e24e90d7a5a77d5f91de8ef8276 469 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 172 191 7.6E-20 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DB34_09570 97c77e24e90d7a5a77d5f91de8ef8276 469 Gene3D G3DSA:3.40.120.10 2 153 3.5E-44 T 11-10-2018 DB34_09570 97c77e24e90d7a5a77d5f91de8ef8276 469 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 100 109 - T 11-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DB34_09570 97c77e24e90d7a5a77d5f91de8ef8276 469 Gene3D G3DSA:3.40.120.10 252 370 1.6E-36 T 11-10-2018 DB34_09570 97c77e24e90d7a5a77d5f91de8ef8276 469 SUPERFAMILY SSF55957 369 453 1.59E-21 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DB34_09570 97c77e24e90d7a5a77d5f91de8ef8276 469 SUPERFAMILY SSF53738 155 257 1.57E-25 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DB34_09570 97c77e24e90d7a5a77d5f91de8ef8276 469 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 375 453 2.0E-12 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DB34_09570 97c77e24e90d7a5a77d5f91de8ef8276 469 SUPERFAMILY SSF53738 8 178 6.67E-36 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DB34_09570 97c77e24e90d7a5a77d5f91de8ef8276 469 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 260 370 1.1E-21 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DB34_09570 97c77e24e90d7a5a77d5f91de8ef8276 469 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 166 255 3.2E-22 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DB34_09570 97c77e24e90d7a5a77d5f91de8ef8276 469 Gene3D G3DSA:3.40.120.10 174 251 1.7E-27 T 11-10-2018 DB34_05035 74a592d4a9c84186a267042be1571ed4 181 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 14 156 2.5E-42 T 11-10-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 DB34_05035 74a592d4a9c84186a267042be1571ed4 181 Pfam PF02470 MlaD protein 48 125 1.6E-17 T 11-10-2018 IPR003399 Mce/MlaD DB34_05085 be220ca9be1b47da1627f477209ec20e 748 Gene3D G3DSA:3.40.50.300 36 282 2.0E-77 T 11-10-2018 DB34_05085 be220ca9be1b47da1627f477209ec20e 748 SMART SM00490 499 585 9.2E-20 T 11-10-2018 IPR001650 Helicase, C-terminal DB34_05085 be220ca9be1b47da1627f477209ec20e 748 SUPERFAMILY SSF52540 43 452 6.26E-133 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_05085 be220ca9be1b47da1627f477209ec20e 748 SMART SM00487 48 464 1.5E-30 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DB34_05085 be220ca9be1b47da1627f477209ec20e 748 Gene3D G3DSA:3.40.50.300 454 635 4.0E-49 T 11-10-2018 DB34_05085 be220ca9be1b47da1627f477209ec20e 748 Pfam PF00271 Helicase conserved C-terminal domain 480 583 2.3E-18 T 11-10-2018 IPR001650 Helicase, C-terminal DB34_05085 be220ca9be1b47da1627f477209ec20e 748 Hamap MF_00204 UvrABC system protein B [uvrB]. 42 699 41.569 T 11-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 DB34_05085 be220ca9be1b47da1627f477209ec20e 748 Gene3D G3DSA:3.40.50.300 307 453 4.9E-47 T 11-10-2018 DB34_05085 be220ca9be1b47da1627f477209ec20e 748 SUPERFAMILY SSF46600 655 701 6.41E-11 T 11-10-2018 IPR036876 UVR domain superfamily DB34_05085 be220ca9be1b47da1627f477209ec20e 748 Pfam PF04851 Type III restriction enzyme, res subunit 52 178 4.9E-11 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 DB34_05085 be220ca9be1b47da1627f477209ec20e 748 Pfam PF12344 Ultra-violet resistance protein B 591 632 7.0E-21 T 11-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain DB34_05085 be220ca9be1b47da1627f477209ec20e 748 SUPERFAMILY SSF52540 72 619 7.62E-36 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_05085 be220ca9be1b47da1627f477209ec20e 748 Pfam PF02151 UvrB/uvrC motif 667 698 3.6E-7 T 11-10-2018 IPR001943 UVR domain GO:0005515 DB34_05085 be220ca9be1b47da1627f477209ec20e 748 Gene3D G3DSA:4.10.860.10 650 702 2.3E-8 T 11-10-2018 DB34_05085 be220ca9be1b47da1627f477209ec20e 748 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 45 696 0.0 T 11-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 DB34_10140 9386d4414bf4f977e2a2e123528c4fae 89 Gene3D G3DSA:1.20.58.110 1 87 1.1E-30 T 11-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_10140 9386d4414bf4f977e2a2e123528c4fae 89 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 22 89 7.0E-21 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_10140 9386d4414bf4f977e2a2e123528c4fae 89 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 3.9E-28 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_10140 9386d4414bf4f977e2a2e123528c4fae 89 SUPERFAMILY SSF46992 3 86 3.4E-31 T 11-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_10140 9386d4414bf4f977e2a2e123528c4fae 89 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 18.229 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_10140 9386d4414bf4f977e2a2e123528c4fae 89 Pfam PF01649 Ribosomal protein S20 2 84 2.5E-28 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_01465 0e0d9bc767e11187c6d4454290851594 933 Gene3D G3DSA:1.20.1060.10 547 662 4.5E-37 T 11-10-2018 DB34_01465 0e0d9bc767e11187c6d4454290851594 933 Pfam PF00476 DNA polymerase family A 555 931 7.3E-143 T 11-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DB34_01465 0e0d9bc767e11187c6d4454290851594 933 SMART SM00474 330 522 1.3E-32 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 DB34_01465 0e0d9bc767e11187c6d4454290851594 933 Gene3D G3DSA:3.30.70.370 668 929 1.9E-104 T 11-10-2018 DB34_01465 0e0d9bc767e11187c6d4454290851594 933 Gene3D G3DSA:3.30.420.10 326 546 1.3E-59 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DB34_01465 0e0d9bc767e11187c6d4454290851594 933 SUPERFAMILY SSF53098 327 522 2.36E-45 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily DB34_01465 0e0d9bc767e11187c6d4454290851594 933 TIGRFAM TIGR00593 pola: DNA polymerase I 7 933 1.2E-283 T 11-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DB34_01465 0e0d9bc767e11187c6d4454290851594 933 ProSitePatterns PS00447 DNA polymerase family A signature. 758 777 - T 11-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DB34_01465 0e0d9bc767e11187c6d4454290851594 933 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 169 263 7.9E-31 T 11-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 DB34_01465 0e0d9bc767e11187c6d4454290851594 933 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 6 168 6.6E-54 T 11-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 DB34_01465 0e0d9bc767e11187c6d4454290851594 933 PRINTS PR00868 DNA-polymerase family A (pol I) signature 795 806 8.6E-73 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DB34_01465 0e0d9bc767e11187c6d4454290851594 933 PRINTS PR00868 DNA-polymerase family A (pol I) signature 817 828 8.6E-73 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DB34_01465 0e0d9bc767e11187c6d4454290851594 933 PRINTS PR00868 DNA-polymerase family A (pol I) signature 849 865 8.6E-73 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DB34_01465 0e0d9bc767e11187c6d4454290851594 933 PRINTS PR00868 DNA-polymerase family A (pol I) signature 758 783 8.6E-73 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DB34_01465 0e0d9bc767e11187c6d4454290851594 933 PRINTS PR00868 DNA-polymerase family A (pol I) signature 880 893 8.6E-73 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DB34_01465 0e0d9bc767e11187c6d4454290851594 933 PRINTS PR00868 DNA-polymerase family A (pol I) signature 734 747 8.6E-73 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DB34_01465 0e0d9bc767e11187c6d4454290851594 933 PRINTS PR00868 DNA-polymerase family A (pol I) signature 659 681 8.6E-73 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DB34_01465 0e0d9bc767e11187c6d4454290851594 933 PRINTS PR00868 DNA-polymerase family A (pol I) signature 704 727 8.6E-73 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DB34_01465 0e0d9bc767e11187c6d4454290851594 933 PRINTS PR00868 DNA-polymerase family A (pol I) signature 682 697 8.6E-73 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DB34_01465 0e0d9bc767e11187c6d4454290851594 933 SMART SM00475 5 260 1.9E-119 T 11-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 DB34_01465 0e0d9bc767e11187c6d4454290851594 933 Gene3D G3DSA:1.10.150.20 713 856 1.9E-104 T 11-10-2018 DB34_01465 0e0d9bc767e11187c6d4454290851594 933 SMART SM00482 690 897 1.6E-105 T 11-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DB34_01465 0e0d9bc767e11187c6d4454290851594 933 SMART SM00279 171 206 4.1E-15 T 11-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 DB34_01465 0e0d9bc767e11187c6d4454290851594 933 SUPERFAMILY SSF56672 527 933 2.45E-144 T 11-10-2018 DB34_01465 0e0d9bc767e11187c6d4454290851594 933 Gene3D G3DSA:3.40.50.1010 7 276 6.5E-94 T 11-10-2018 DB34_01465 0e0d9bc767e11187c6d4454290851594 933 Gene3D G3DSA:1.10.150.20 172 245 6.5E-94 T 11-10-2018 DB34_01465 0e0d9bc767e11187c6d4454290851594 933 SUPERFAMILY SSF47807 169 283 6.43E-31 T 11-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily DB34_01465 0e0d9bc767e11187c6d4454290851594 933 SUPERFAMILY SSF88723 4 168 8.18E-52 T 11-10-2018 IPR029060 PIN-like domain superfamily DB34_01465 0e0d9bc767e11187c6d4454290851594 933 Pfam PF01612 3'-5' exonuclease 330 521 1.3E-29 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 DB34_09920 056fac4ca07be804a9baa16f31b4baf8 172 PRINTS PR00604 Class IA and IB cytochrome C signature 150 158 4.4E-12 T 11-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB34_09920 056fac4ca07be804a9baa16f31b4baf8 172 PRINTS PR00604 Class IA and IB cytochrome C signature 70 77 4.4E-12 T 11-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB34_09920 056fac4ca07be804a9baa16f31b4baf8 172 PRINTS PR00604 Class IA and IB cytochrome C signature 83 98 4.4E-12 T 11-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB34_09920 056fac4ca07be804a9baa16f31b4baf8 172 PRINTS PR00604 Class IA and IB cytochrome C signature 114 130 4.4E-12 T 11-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB34_09920 056fac4ca07be804a9baa16f31b4baf8 172 PRINTS PR00604 Class IA and IB cytochrome C signature 99 109 4.4E-12 T 11-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB34_09920 056fac4ca07be804a9baa16f31b4baf8 172 PRINTS PR00604 Class IA and IB cytochrome C signature 133 143 4.4E-12 T 11-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB34_09920 056fac4ca07be804a9baa16f31b4baf8 172 Gene3D G3DSA:1.10.760.10 43 158 1.8E-29 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DB34_09920 056fac4ca07be804a9baa16f31b4baf8 172 SUPERFAMILY SSF46626 57 160 3.69E-25 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DB34_09920 056fac4ca07be804a9baa16f31b4baf8 172 Pfam PF00034 Cytochrome c 61 159 3.7E-8 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB34_03460 2020325f05747099a5e8436ed69ee5d6 190 Gene3D G3DSA:2.60.120.10 1 186 5.2E-70 T 11-10-2018 IPR014710 RmlC-like jelly roll fold DB34_03460 2020325f05747099a5e8436ed69ee5d6 190 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 5 176 1.2E-67 T 11-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 DB34_03460 2020325f05747099a5e8436ed69ee5d6 190 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 180 1.0E-96 T 11-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 DB34_03460 2020325f05747099a5e8436ed69ee5d6 190 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 6 176 1.8E-70 T 11-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 DB34_03460 2020325f05747099a5e8436ed69ee5d6 190 SUPERFAMILY SSF51182 1 185 2.18E-74 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily DB34_03450 a9e85aae31ec0eb9162d0d3f28235fa3 352 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 337 6.3E-136 T 11-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 DB34_03450 a9e85aae31ec0eb9162d0d3f28235fa3 352 Gene3D G3DSA:3.40.50.720 2 322 1.4E-119 T 11-10-2018 DB34_03450 a9e85aae31ec0eb9162d0d3f28235fa3 352 SUPERFAMILY SSF51735 1 339 1.51E-87 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily DB34_03450 a9e85aae31ec0eb9162d0d3f28235fa3 352 Gene3D G3DSA:3.90.25.10 201 330 1.4E-119 T 11-10-2018 DB34_03450 a9e85aae31ec0eb9162d0d3f28235fa3 352 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 323 2.5E-85 T 11-10-2018 IPR016040 NAD(P)-binding domain DB34_04715 dfcf6636743faec14a940635d25c4cd2 1051 Gene3D G3DSA:3.30.2090.10 181 277 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DB34_04715 dfcf6636743faec14a940635d25c4cd2 1051 Gene3D G3DSA:3.30.70.1430 40 817 0.0 T 11-10-2018 DB34_04715 dfcf6636743faec14a940635d25c4cd2 1051 Gene3D G3DSA:1.20.1640.10 10 512 0.0 T 11-10-2018 DB34_04715 dfcf6636743faec14a940635d25c4cd2 1051 Gene3D G3DSA:1.20.1640.10 513 1022 0.0 T 11-10-2018 DB34_04715 dfcf6636743faec14a940635d25c4cd2 1051 Pfam PF00873 AcrB/AcrD/AcrF family 4 1025 0.0 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DB34_04715 dfcf6636743faec14a940635d25c4cd2 1051 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.1E-103 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DB34_04715 dfcf6636743faec14a940635d25c4cd2 1051 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 1.1E-103 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DB34_04715 dfcf6636743faec14a940635d25c4cd2 1051 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 1.1E-103 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DB34_04715 dfcf6636743faec14a940635d25c4cd2 1051 PRINTS PR00702 Acriflavin resistance protein family signature 365 386 1.1E-103 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DB34_04715 dfcf6636743faec14a940635d25c4cd2 1051 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 1.1E-103 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DB34_04715 dfcf6636743faec14a940635d25c4cd2 1051 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.1E-103 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DB34_04715 dfcf6636743faec14a940635d25c4cd2 1051 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 1.1E-103 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DB34_04715 dfcf6636743faec14a940635d25c4cd2 1051 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 1.1E-103 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DB34_04715 dfcf6636743faec14a940635d25c4cd2 1051 PRINTS PR00702 Acriflavin resistance protein family signature 621 635 1.1E-103 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DB34_04715 dfcf6636743faec14a940635d25c4cd2 1051 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 3 1038 0.0 T 11-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 DB34_04715 dfcf6636743faec14a940635d25c4cd2 1051 SUPERFAMILY SSF82693 565 669 7.32E-27 T 11-10-2018 DB34_04715 dfcf6636743faec14a940635d25c4cd2 1051 SUPERFAMILY SSF82866 298 499 5.36E-43 T 11-10-2018 DB34_04715 dfcf6636743faec14a940635d25c4cd2 1051 SUPERFAMILY SSF82693 40 129 2.51E-22 T 11-10-2018 DB34_04715 dfcf6636743faec14a940635d25c4cd2 1051 SUPERFAMILY SSF82866 831 1026 2.09E-41 T 11-10-2018 DB34_04715 dfcf6636743faec14a940635d25c4cd2 1051 Gene3D G3DSA:3.30.2090.10 721 809 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DB34_04715 dfcf6636743faec14a940635d25c4cd2 1051 Gene3D G3DSA:3.30.70.1440 669 865 0.0 T 11-10-2018 DB34_04715 dfcf6636743faec14a940635d25c4cd2 1051 SUPERFAMILY SSF82714 184 274 7.06E-21 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DB34_04715 dfcf6636743faec14a940635d25c4cd2 1051 SUPERFAMILY SSF82693 137 331 3.49E-21 T 11-10-2018 DB34_04715 dfcf6636743faec14a940635d25c4cd2 1051 Gene3D G3DSA:3.30.70.1430 567 668 0.0 T 11-10-2018 DB34_04715 dfcf6636743faec14a940635d25c4cd2 1051 SUPERFAMILY SSF82693 672 856 4.71E-24 T 11-10-2018 DB34_04715 dfcf6636743faec14a940635d25c4cd2 1051 SUPERFAMILY SSF82714 723 806 3.01E-19 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DB34_04715 dfcf6636743faec14a940635d25c4cd2 1051 Gene3D G3DSA:3.30.70.1320 135 334 0.0 T 11-10-2018 DB34_02580 aac91b39296aa313b7efd63fb7817fdb 305 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 180 239 3.2E-9 T 11-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 DB34_02580 aac91b39296aa313b7efd63fb7817fdb 305 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 243 304 6.8E-8 T 11-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 DB34_02580 aac91b39296aa313b7efd63fb7817fdb 305 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 9 305 17.593 T 11-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 DB34_02580 aac91b39296aa313b7efd63fb7817fdb 305 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 31 179 9.8E-46 T 11-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 DB34_02580 aac91b39296aa313b7efd63fb7817fdb 305 Gene3D G3DSA:3.30.2350.10 1 241 1.1E-78 T 11-10-2018 DB34_02580 aac91b39296aa313b7efd63fb7817fdb 305 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 10 216 2.5E-59 T 11-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 DB34_02580 aac91b39296aa313b7efd63fb7817fdb 305 SUPERFAMILY SSF55120 8 220 1.15E-69 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DB34_10425 cf63a0a602e21d2e1b4f2a258bf14c87 792 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 160 702 3.1E-197 T 11-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 DB34_10425 cf63a0a602e21d2e1b4f2a258bf14c87 792 SUPERFAMILY SSF56003 138 772 1.7E-203 T 11-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 DB34_10425 cf63a0a602e21d2e1b4f2a258bf14c87 792 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 30 138 6.1E-28 T 11-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead DB34_10425 cf63a0a602e21d2e1b4f2a258bf14c87 792 Gene3D G3DSA:3.90.1170.50 17 138 1.8E-279 T 11-10-2018 DB34_10425 cf63a0a602e21d2e1b4f2a258bf14c87 792 Gene3D G3DSA:3.30.365.10 153 406 1.8E-279 T 11-10-2018 DB34_10425 cf63a0a602e21d2e1b4f2a258bf14c87 792 Gene3D G3DSA:3.30.365.10 139 767 1.8E-279 T 11-10-2018 DB34_10425 cf63a0a602e21d2e1b4f2a258bf14c87 792 SUPERFAMILY SSF54665 15 138 2.22E-40 T 11-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily DB34_10425 cf63a0a602e21d2e1b4f2a258bf14c87 792 TIGRFAM TIGR02965 xanthine_xdhB: xanthine dehydrogenase, molybdopterin binding subunit 18 774 0.0 T 11-10-2018 IPR014309 Xanthine dehydrogenase, molybdopterin binding subunit GO:0030151 KEGG: 00230+1.17.1.4+1.17.3.2|KEGG: 00232+1.17.3.2|KEGG: 00983+1.17.3.2|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999 DB34_10425 cf63a0a602e21d2e1b4f2a258bf14c87 792 SMART SM01008 30 138 4.6E-46 T 11-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead DB34_10425 cf63a0a602e21d2e1b4f2a258bf14c87 792 Gene3D G3DSA:3.30.365.10 458 604 1.8E-279 T 11-10-2018 DB34_10425 cf63a0a602e21d2e1b4f2a258bf14c87 792 Gene3D G3DSA:3.30.365.10 187 281 1.8E-279 T 11-10-2018 DB34_02020 c36a6831fd4690fc0c0e6be768e2e1a8 280 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 12 261 6.2E-76 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 DB34_02020 c36a6831fd4690fc0c0e6be768e2e1a8 280 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 9 266 18.684 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 DB34_02020 c36a6831fd4690fc0c0e6be768e2e1a8 280 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 141 153 - T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 DB34_02020 c36a6831fd4690fc0c0e6be768e2e1a8 280 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 4 265 2.3E-72 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 DB34_00455 92deba0e5d880d9795c9e6059ab59a90 891 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 528 879 2.0E-89 T 11-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 DB34_00455 92deba0e5d880d9795c9e6059ab59a90 891 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 771 789 - T 11-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 DB34_00455 92deba0e5d880d9795c9e6059ab59a90 891 Gene3D G3DSA:3.30.1490.20 14 246 1.4E-105 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 DB34_00455 92deba0e5d880d9795c9e6059ab59a90 891 Gene3D G3DSA:3.20.20.60 542 884 2.8E-152 T 11-10-2018 DB34_00455 92deba0e5d880d9795c9e6059ab59a90 891 Gene3D G3DSA:3.30.470.20 247 353 5.7E-39 T 11-10-2018 DB34_00455 92deba0e5d880d9795c9e6059ab59a90 891 PIRSF PIRSF000853 1 889 0.0 T 11-10-2018 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 DB34_00455 92deba0e5d880d9795c9e6059ab59a90 891 SUPERFAMILY SSF56059 1 390 2.94E-144 T 11-10-2018 DB34_00455 92deba0e5d880d9795c9e6059ab59a90 891 Pfam PF00391 PEP-utilising enzyme, mobile domain 432 513 1.4E-25 T 11-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 DB34_00455 92deba0e5d880d9795c9e6059ab59a90 891 Gene3D G3DSA:1.10.189.10 357 539 4.0E-77 T 11-10-2018 DB34_00455 92deba0e5d880d9795c9e6059ab59a90 891 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 460 471 - T 11-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 DB34_00455 92deba0e5d880d9795c9e6059ab59a90 891 SUPERFAMILY SSF51621 521 881 1.08E-130 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 DB34_00455 92deba0e5d880d9795c9e6059ab59a90 891 TIGRFAM TIGR01828 pyru_phos_dikin: pyruvate, phosphate dikinase 3 881 0.0 T 11-10-2018 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 DB34_00455 92deba0e5d880d9795c9e6059ab59a90 891 SUPERFAMILY SSF52009 399 522 2.22E-37 T 11-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 DB34_00455 92deba0e5d880d9795c9e6059ab59a90 891 Gene3D G3DSA:3.50.30.10 395 519 4.0E-77 T 11-10-2018 DB34_00455 92deba0e5d880d9795c9e6059ab59a90 891 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 313 369 8.8E-11 T 11-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 DB34_00455 92deba0e5d880d9795c9e6059ab59a90 891 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 21 297 2.5E-51 T 11-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 DB34_00455 92deba0e5d880d9795c9e6059ab59a90 891 Gene3D G3DSA:1.20.80.30 114 201 1.4E-105 T 11-10-2018 DB34_05535 66e3574b00e171a581f78ba06fc1b6d4 625 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 37 162 6.0E-14 T 11-10-2018 DB34_05535 66e3574b00e171a581f78ba06fc1b6d4 625 SUPERFAMILY SSF110942 502 614 4.18E-25 T 11-10-2018 IPR037196 HSP90, C-terminal domain DB34_05535 66e3574b00e171a581f78ba06fc1b6d4 625 PRINTS PR00775 90kDa heat shock protein signature 13 33 1.2E-55 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal DB34_05535 66e3574b00e171a581f78ba06fc1b6d4 625 PRINTS PR00775 90kDa heat shock protein signature 82 99 1.2E-55 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal DB34_05535 66e3574b00e171a581f78ba06fc1b6d4 625 PRINTS PR00775 90kDa heat shock protein signature 100 117 1.2E-55 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal DB34_05535 66e3574b00e171a581f78ba06fc1b6d4 625 PRINTS PR00775 90kDa heat shock protein signature 128 150 1.2E-55 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal DB34_05535 66e3574b00e171a581f78ba06fc1b6d4 625 PRINTS PR00775 90kDa heat shock protein signature 196 214 1.2E-55 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal DB34_05535 66e3574b00e171a581f78ba06fc1b6d4 625 PRINTS PR00775 90kDa heat shock protein signature 34 56 1.2E-55 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal DB34_05535 66e3574b00e171a581f78ba06fc1b6d4 625 PRINTS PR00775 90kDa heat shock protein signature 178 195 1.2E-55 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal DB34_05535 66e3574b00e171a581f78ba06fc1b6d4 625 Gene3D G3DSA:3.30.230.80 231 392 5.9E-58 T 11-10-2018 DB34_05535 66e3574b00e171a581f78ba06fc1b6d4 625 SUPERFAMILY SSF54211 229 478 8.34E-83 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DB34_05535 66e3574b00e171a581f78ba06fc1b6d4 625 PIRSF PIRSF002583 1 624 3.5E-194 T 11-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 DB34_05535 66e3574b00e171a581f78ba06fc1b6d4 625 SMART SM00387 35 190 0.0071 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB34_05535 66e3574b00e171a581f78ba06fc1b6d4 625 Gene3D G3DSA:3.30.565.10 1 230 5.9E-75 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB34_05535 66e3574b00e171a581f78ba06fc1b6d4 625 Hamap MF_00505 Chaperone protein HtpG [htpG]. 10 615 28.349 T 11-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 DB34_05535 66e3574b00e171a581f78ba06fc1b6d4 625 SUPERFAMILY SSF55874 13 219 2.88E-60 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB34_05535 66e3574b00e171a581f78ba06fc1b6d4 625 Pfam PF00183 Hsp90 protein 222 618 6.5E-106 T 11-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 DB34_05535 66e3574b00e171a581f78ba06fc1b6d4 625 Gene3D G3DSA:3.40.50.11260 393 479 4.1E-28 T 11-10-2018 DB34_05535 66e3574b00e171a581f78ba06fc1b6d4 625 Gene3D G3DSA:1.20.120.790 485 615 3.5E-29 T 11-10-2018 IPR037196 HSP90, C-terminal domain DB34_10370 d786c505e82ee5438f4730ec6a7fb28a 376 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 73 177 1.3E-22 T 11-10-2018 IPR026992 Non-haem dioxygenase N-terminal domain DB34_10370 d786c505e82ee5438f4730ec6a7fb28a 376 Gene3D G3DSA:2.60.120.330 63 376 1.2E-85 T 11-10-2018 IPR027443 Isopenicillin N synthase-like DB34_10370 d786c505e82ee5438f4730ec6a7fb28a 376 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 242 340 2.2E-16 T 11-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 DB34_10370 d786c505e82ee5438f4730ec6a7fb28a 376 SUPERFAMILY SSF51197 71 371 3.02E-76 T 11-10-2018 DB34_09935 cd6c18c7739b5848eea97d899390c984 497 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 341 353 6.2E-6 T 11-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 DB34_09935 cd6c18c7739b5848eea97d899390c984 497 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 289 303 6.2E-6 T 11-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 DB34_09935 cd6c18c7739b5848eea97d899390c984 497 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 209 224 6.2E-6 T 11-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 DB34_09935 cd6c18c7739b5848eea97d899390c984 497 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 317 330 6.2E-6 T 11-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 DB34_09935 cd6c18c7739b5848eea97d899390c984 497 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 139 3.8E-38 T 11-10-2018 DB34_09935 cd6c18c7739b5848eea97d899390c984 497 SUPERFAMILY SSF54211 10 169 1.33E-25 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DB34_09935 cd6c18c7739b5848eea97d899390c984 497 Pfam PF01078 Magnesium chelatase, subunit ChlI 190 390 2.6E-90 T 11-10-2018 IPR000523 Magnesium chelatase ChlI domain DB34_09935 cd6c18c7739b5848eea97d899390c984 497 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 402 491 1.4E-21 T 11-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain DB34_09935 cd6c18c7739b5848eea97d899390c984 497 Gene3D G3DSA:3.40.50.300 191 496 2.6E-56 T 11-10-2018 DB34_09935 cd6c18c7739b5848eea97d899390c984 497 SMART SM00382 210 392 4.0E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_09935 cd6c18c7739b5848eea97d899390c984 497 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 8 491 4.6E-151 T 11-10-2018 IPR004482 Mg chelatase-related protein DB34_09935 cd6c18c7739b5848eea97d899390c984 497 SUPERFAMILY SSF52540 190 493 1.46E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_11745 a980314e79243fdd63ceb8df95621f4e 553 Gene3D G3DSA:3.40.190.10 14 285 9.4E-50 T 11-10-2018 DB34_11745 a980314e79243fdd63ceb8df95621f4e 553 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 76 465 9.5E-58 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain DB34_11745 a980314e79243fdd63ceb8df95621f4e 553 PIRSF PIRSF002741 7 546 1.7E-50 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DB34_11745 a980314e79243fdd63ceb8df95621f4e 553 SUPERFAMILY SSF53850 24 548 4.71E-95 T 11-10-2018 DB34_11745 a980314e79243fdd63ceb8df95621f4e 553 Gene3D G3DSA:3.10.105.10 292 525 2.3E-52 T 11-10-2018 DB34_06545 661e1f6c2e9c7dafd5cf1fb7a9cab304 131 Gene3D G3DSA:1.20.120.330 3 119 2.9E-15 T 11-10-2018 DB34_06545 661e1f6c2e9c7dafd5cf1fb7a9cab304 131 Pfam PF05168 HEPN domain 6 115 3.7E-6 T 11-10-2018 IPR007842 HEPN domain DB34_04800 c69b432dc504ded1efacbc54fb5f0454 370 Pfam PF13416 Bacterial extracellular solute-binding protein 161 334 3.5E-17 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein DB34_04800 c69b432dc504ded1efacbc54fb5f0454 370 Gene3D G3DSA:3.40.190.10 77 347 2.1E-53 T 11-10-2018 DB34_04800 c69b432dc504ded1efacbc54fb5f0454 370 SUPERFAMILY SSF53850 73 366 4.75E-25 T 11-10-2018 DB34_04800 c69b432dc504ded1efacbc54fb5f0454 370 Gene3D G3DSA:3.40.190.10 162 352 2.1E-53 T 11-10-2018 DB34_04030 9a3c324dc145c2c8b73f4c37ff600681 234 SMART SM00464 30 224 2.3E-12 T 11-10-2018 IPR003111 Lon, substrate-binding domain DB34_04030 9a3c324dc145c2c8b73f4c37ff600681 234 SUPERFAMILY SSF88697 30 223 4.97E-47 T 11-10-2018 IPR015947 PUA-like superfamily DB34_04030 9a3c324dc145c2c8b73f4c37ff600681 234 Gene3D G3DSA:2.30.130.40 25 139 2.3E-30 T 11-10-2018 DB34_04030 9a3c324dc145c2c8b73f4c37ff600681 234 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 31 222 4.5E-27 T 11-10-2018 IPR003111 Lon, substrate-binding domain DB34_12050 6e3199ca2084e8c4861071262ea91bf9 346 Pfam PF02371 Transposase IS116/IS110/IS902 family 211 288 2.0E-23 T 11-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 DB34_12050 6e3199ca2084e8c4861071262ea91bf9 346 Pfam PF01548 Transposase 7 142 1.1E-10 T 11-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 DB34_13695 6e3199ca2084e8c4861071262ea91bf9 346 Pfam PF02371 Transposase IS116/IS110/IS902 family 211 288 2.0E-23 T 11-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 DB34_13695 6e3199ca2084e8c4861071262ea91bf9 346 Pfam PF01548 Transposase 7 142 1.1E-10 T 11-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 DB34_05140 6e3199ca2084e8c4861071262ea91bf9 346 Pfam PF02371 Transposase IS116/IS110/IS902 family 211 288 2.0E-23 T 11-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 DB34_05140 6e3199ca2084e8c4861071262ea91bf9 346 Pfam PF01548 Transposase 7 142 1.1E-10 T 11-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 DB34_06210 8e9eb30ccd0368e9585007abdbe851c8 730 Gene3D G3DSA:3.30.365.10 348 439 4.6E-56 T 11-10-2018 DB34_06210 8e9eb30ccd0368e9585007abdbe851c8 730 Gene3D G3DSA:3.30.365.10 326 553 4.6E-56 T 11-10-2018 DB34_06210 8e9eb30ccd0368e9585007abdbe851c8 730 SMART SM01008 216 296 1.1E-13 T 11-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead DB34_06210 8e9eb30ccd0368e9585007abdbe851c8 730 SUPERFAMILY SSF56003 325 721 4.06E-102 T 11-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 DB34_06210 8e9eb30ccd0368e9585007abdbe851c8 730 PIRSF PIRSF036389 5 727 1.8E-228 T 11-10-2018 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related DB34_06210 8e9eb30ccd0368e9585007abdbe851c8 730 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 591 674 1.0E-14 T 11-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 DB34_06210 8e9eb30ccd0368e9585007abdbe851c8 730 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 46 208 1.7E-14 T 11-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 DB34_06210 8e9eb30ccd0368e9585007abdbe851c8 730 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 323 553 3.5E-33 T 11-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 DB34_06210 8e9eb30ccd0368e9585007abdbe851c8 730 SUPERFAMILY SSF56003 46 248 3.49E-36 T 11-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 DB34_06210 8e9eb30ccd0368e9585007abdbe851c8 730 Gene3D G3DSA:3.30.365.10 54 187 4.0E-21 T 11-10-2018 DB34_06210 8e9eb30ccd0368e9585007abdbe851c8 730 Gene3D G3DSA:3.90.1170.50 188 272 4.0E-10 T 11-10-2018 DB34_06210 8e9eb30ccd0368e9585007abdbe851c8 730 Gene3D G3DSA:3.30.365.10 578 723 2.6E-34 T 11-10-2018 DB34_04635 ec971544b49fc79350527a3b8c345389 402 SMART SM00474 12 181 3.8E-33 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 DB34_04635 ec971544b49fc79350527a3b8c345389 402 Pfam PF00570 HRDC domain 223 290 1.2E-14 T 11-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 DB34_04635 ec971544b49fc79350527a3b8c345389 402 SUPERFAMILY SSF47819 201 306 4.49E-22 T 11-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 DB34_04635 ec971544b49fc79350527a3b8c345389 402 SUPERFAMILY SSF53098 11 214 4.81E-63 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily DB34_04635 ec971544b49fc79350527a3b8c345389 402 Hamap MF_01899 Ribonuclease D [rnd]. 12 378 44.621 T 11-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 DB34_04635 ec971544b49fc79350527a3b8c345389 402 TIGRFAM TIGR01388 rnd: ribonuclease D 14 373 1.4E-110 T 11-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 DB34_04635 ec971544b49fc79350527a3b8c345389 402 Gene3D G3DSA:3.30.420.10 12 200 2.3E-60 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DB34_04635 ec971544b49fc79350527a3b8c345389 402 Gene3D G3DSA:1.10.150.80 205 304 5.4E-18 T 11-10-2018 DB34_04635 ec971544b49fc79350527a3b8c345389 402 SUPERFAMILY SSF47819 315 381 8.04E-12 T 11-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 DB34_04635 ec971544b49fc79350527a3b8c345389 402 SMART SM00341 219 300 1.1E-9 T 11-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 DB34_04635 ec971544b49fc79350527a3b8c345389 402 Pfam PF01612 3'-5' exonuclease 14 181 3.3E-34 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 DB34_03000 41f1a7d07e83ed73ab2da11b3f09e760 625 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 146 599 95.802 T 11-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 DB34_03000 41f1a7d07e83ed73ab2da11b3f09e760 625 Pfam PF13667 ThiC-associated domain 38 105 3.9E-23 T 11-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 DB34_03000 41f1a7d07e83ed73ab2da11b3f09e760 625 Pfam PF01964 Radical SAM ThiC family 147 594 1.4E-195 T 11-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 DB34_03000 41f1a7d07e83ed73ab2da11b3f09e760 625 Gene3D G3DSA:3.20.20.540 218 530 4.5E-151 T 11-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 DB34_03000 41f1a7d07e83ed73ab2da11b3f09e760 625 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 146 597 1.5E-204 T 11-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 DB34_00260 c10504bb0e8c0bafae492fe59d050320 1635 SUPERFAMILY SSF53335 680 1068 5.09E-28 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB34_00260 c10504bb0e8c0bafae492fe59d050320 1635 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 802 816 1.7E-6 T 11-10-2018 DB34_00260 c10504bb0e8c0bafae492fe59d050320 1635 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 767 783 1.7E-6 T 11-10-2018 DB34_00260 c10504bb0e8c0bafae492fe59d050320 1635 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 904 916 1.7E-6 T 11-10-2018 DB34_00260 c10504bb0e8c0bafae492fe59d050320 1635 Gene3D G3DSA:3.40.50.150 746 1091 2.2E-38 T 11-10-2018 DB34_00260 c10504bb0e8c0bafae492fe59d050320 1635 Pfam PF04851 Type III restriction enzyme, res subunit 52 253 3.2E-32 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 DB34_00260 c10504bb0e8c0bafae492fe59d050320 1635 SMART SM00487 50 286 6.2E-14 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DB34_00260 c10504bb0e8c0bafae492fe59d050320 1635 SUPERFAMILY SSF52540 99 495 2.77E-21 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_00260 c10504bb0e8c0bafae492fe59d050320 1635 Gene3D G3DSA:3.40.50.300 287 508 1.8E-26 T 11-10-2018 DB34_00260 c10504bb0e8c0bafae492fe59d050320 1635 Pfam PF13156 Restriction endonuclease 1 45 5.5E-10 T 11-10-2018 IPR039442 Mrr-like domain DB34_00260 c10504bb0e8c0bafae492fe59d050320 1635 Pfam PF00271 Helicase conserved C-terminal domain 399 482 1.2E-5 T 11-10-2018 IPR001650 Helicase, C-terminal DB34_00260 c10504bb0e8c0bafae492fe59d050320 1635 Pfam PF02384 N-6 DNA Methylase 746 925 2.6E-6 T 11-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 DB34_00260 c10504bb0e8c0bafae492fe59d050320 1635 SMART SM00490 389 483 0.006 T 11-10-2018 IPR001650 Helicase, C-terminal DB34_00260 c10504bb0e8c0bafae492fe59d050320 1635 SUPERFAMILY SSF52540 16 252 4.95E-25 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_00410 324acb377744c2ae008a765956f35d6c 314 Gene3D G3DSA:3.90.78.10 220 314 2.0E-29 T 11-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DB34_00410 324acb377744c2ae008a765956f35d6c 314 Pfam PF01565 FAD binding domain 43 169 2.4E-17 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 DB34_00410 324acb377744c2ae008a765956f35d6c 314 Gene3D G3DSA:3.30.465.10 94 219 5.8E-35 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 DB34_00410 324acb377744c2ae008a765956f35d6c 314 Gene3D G3DSA:3.30.43.10 9 90 9.8E-19 T 11-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 DB34_00410 324acb377744c2ae008a765956f35d6c 314 SUPERFAMILY SSF56176 28 208 3.63E-39 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 DB34_00410 324acb377744c2ae008a765956f35d6c 314 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 32 307 3.1E-56 T 11-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DB34_00410 324acb377744c2ae008a765956f35d6c 314 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 204 305 2.5E-27 T 11-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DB34_00410 324acb377744c2ae008a765956f35d6c 314 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 314 91.273 T 11-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DB34_00410 324acb377744c2ae008a765956f35d6c 314 SUPERFAMILY SSF56194 205 308 2.88E-32 T 11-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DB34_12775 169b2c9105dbac5701cd9bfb739c9515 472 Hamap MF_00195 GTPase Der [der]. 12 466 36.729 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 DB34_12775 169b2c9105dbac5701cd9bfb739c9515 472 SMART SM00382 204 344 0.074 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_12775 169b2c9105dbac5701cd9bfb739c9515 472 SMART SM00382 11 152 9.6 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_12775 169b2c9105dbac5701cd9bfb739c9515 472 Gene3D G3DSA:3.40.50.300 203 377 1.5E-46 T 11-10-2018 DB34_12775 169b2c9105dbac5701cd9bfb739c9515 472 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 383 463 4.8E-33 T 11-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like DB34_12775 169b2c9105dbac5701cd9bfb739c9515 472 SUPERFAMILY SSF52540 14 187 2.41E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_12775 169b2c9105dbac5701cd9bfb739c9515 472 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 257 272 2.9E-6 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 DB34_12775 169b2c9105dbac5701cd9bfb739c9515 472 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 208 228 2.9E-6 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 DB34_12775 169b2c9105dbac5701cd9bfb739c9515 472 Gene3D G3DSA:3.30.300.20 383 466 1.1E-30 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta DB34_12775 169b2c9105dbac5701cd9bfb739c9515 472 SUPERFAMILY SSF52540 148 470 2.76E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_12775 169b2c9105dbac5701cd9bfb739c9515 472 Pfam PF01926 50S ribosome-binding GTPase 207 325 7.0E-23 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 DB34_12775 169b2c9105dbac5701cd9bfb739c9515 472 Pfam PF01926 50S ribosome-binding GTPase 15 130 1.8E-26 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 DB34_12775 169b2c9105dbac5701cd9bfb739c9515 472 Gene3D G3DSA:3.40.50.300 14 177 4.5E-42 T 11-10-2018 DB34_12775 169b2c9105dbac5701cd9bfb739c9515 472 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 13 463 5.5E-163 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 DB34_12775 169b2c9105dbac5701cd9bfb739c9515 472 PIRSF PIRSF006485 11 471 9.4E-162 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 DB34_12775 169b2c9105dbac5701cd9bfb739c9515 472 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 133 7.3E-18 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DB34_12775 169b2c9105dbac5701cd9bfb739c9515 472 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 206 370 3.0E-25 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DB34_13750 14cc045908cda5df79fee1a820b4c40e 292 Pfam PF13276 HTH-like domain 35 91 1.8E-13 T 11-10-2018 IPR025948 HTH-like domain DB34_13750 14cc045908cda5df79fee1a820b4c40e 292 Gene3D G3DSA:3.30.420.10 102 274 8.8E-16 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DB34_13750 14cc045908cda5df79fee1a820b4c40e 292 SUPERFAMILY SSF53098 111 268 5.31E-52 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily DB34_13750 14cc045908cda5df79fee1a820b4c40e 292 Pfam PF00665 Integrase core domain 112 224 1.2E-22 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 DB34_03525 c2871204629ef2088f8cd037c190e8bd 221 Pfam PF12146 Serine aminopeptidase, S33 36 133 1.7E-8 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 DB34_03525 c2871204629ef2088f8cd037c190e8bd 221 Gene3D G3DSA:3.40.50.1820 2 219 3.8E-60 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold DB34_03525 c2871204629ef2088f8cd037c190e8bd 221 SUPERFAMILY SSF53474 4 209 3.41E-45 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold DB34_05840 9e1ec7262eb9994af42bcfd41f7fc108 562 SUPERFAMILY SSF52467 191 357 4.8E-36 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily DB34_05840 9e1ec7262eb9994af42bcfd41f7fc108 562 Gene3D G3DSA:3.40.50.1220 188 358 4.4E-38 T 11-10-2018 DB34_05840 9e1ec7262eb9994af42bcfd41f7fc108 562 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 429 448 - T 11-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 DB34_05840 9e1ec7262eb9994af42bcfd41f7fc108 562 SUPERFAMILY SSF52518 370 554 6.53E-51 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold DB34_05840 9e1ec7262eb9994af42bcfd41f7fc108 562 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 392 538 9.4E-39 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 DB34_05840 9e1ec7262eb9994af42bcfd41f7fc108 562 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 330 1.1E-28 T 11-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 DB34_05840 9e1ec7262eb9994af42bcfd41f7fc108 562 Gene3D G3DSA:3.40.50.970 364 555 3.3E-54 T 11-10-2018 DB34_05840 9e1ec7262eb9994af42bcfd41f7fc108 562 TIGRFAM TIGR02418 acolac_catab: acetolactate synthase, catabolic 12 550 5.2E-237 T 11-10-2018 IPR012782 Acetolactate synthase, catabolic GO:0000287|GO:0003984|GO:0030976|GO:0034077 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 DB34_05840 9e1ec7262eb9994af42bcfd41f7fc108 562 SUPERFAMILY SSF52518 9 186 4.98E-48 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold DB34_05840 9e1ec7262eb9994af42bcfd41f7fc108 562 Gene3D G3DSA:3.40.50.970 3 185 1.1E-62 T 11-10-2018 DB34_05840 9e1ec7262eb9994af42bcfd41f7fc108 562 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 12 177 7.2E-49 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 DB34_02900 2b3823e8bd9c4bc9eb7ebde4eda967c3 514 SUPERFAMILY SSF47794 434 498 1.08E-8 T 11-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 DB34_02900 2b3823e8bd9c4bc9eb7ebde4eda967c3 514 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 7 415 30.263 T 11-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 DB34_02900 2b3823e8bd9c4bc9eb7ebde4eda967c3 514 SMART SM00322 234 297 10.0 T 11-10-2018 IPR004087 K Homology domain GO:0003676 DB34_02900 2b3823e8bd9c4bc9eb7ebde4eda967c3 514 SMART SM00322 305 374 0.0046 T 11-10-2018 IPR004087 K Homology domain GO:0003676 DB34_02900 2b3823e8bd9c4bc9eb7ebde4eda967c3 514 Gene3D G3DSA:1.10.150.20 435 496 1.5E-11 T 11-10-2018 DB34_02900 2b3823e8bd9c4bc9eb7ebde4eda967c3 514 Gene3D G3DSA:3.30.300.20 203 281 4.8E-34 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta DB34_02900 2b3823e8bd9c4bc9eb7ebde4eda967c3 514 SUPERFAMILY SSF50249 136 203 1.29E-18 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB34_02900 2b3823e8bd9c4bc9eb7ebde4eda967c3 514 Gene3D G3DSA:1.10.150.20 359 424 3.6E-18 T 11-10-2018 DB34_02900 2b3823e8bd9c4bc9eb7ebde4eda967c3 514 Pfam PF00575 S1 RNA binding domain 136 197 2.2E-5 T 11-10-2018 IPR003029 S1 domain GO:0003676 DB34_02900 2b3823e8bd9c4bc9eb7ebde4eda967c3 514 Pfam PF13184 NusA-like KH domain 234 300 4.5E-27 T 11-10-2018 IPR025249 KH domain, NusA-like GO:0003723 DB34_02900 2b3823e8bd9c4bc9eb7ebde4eda967c3 514 Pfam PF08529 NusA N-terminal domain 9 129 7.6E-36 T 11-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 DB34_02900 2b3823e8bd9c4bc9eb7ebde4eda967c3 514 SMART SM00316 138 204 1.0E-6 T 11-10-2018 IPR022967 RNA-binding domain, S1 DB34_02900 2b3823e8bd9c4bc9eb7ebde4eda967c3 514 SUPERFAMILY SSF47794 353 418 9.42E-15 T 11-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 DB34_02900 2b3823e8bd9c4bc9eb7ebde4eda967c3 514 Gene3D G3DSA:3.30.300.20 283 350 2.6E-26 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta DB34_02900 2b3823e8bd9c4bc9eb7ebde4eda967c3 514 Gene3D G3DSA:2.40.50.140 140 202 7.5E-22 T 11-10-2018 DB34_02900 2b3823e8bd9c4bc9eb7ebde4eda967c3 514 SUPERFAMILY SSF69705 8 130 1.96E-39 T 11-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 DB34_02900 2b3823e8bd9c4bc9eb7ebde4eda967c3 514 Pfam PF14520 Helix-hairpin-helix domain 373 414 0.0025 T 11-10-2018 DB34_02900 2b3823e8bd9c4bc9eb7ebde4eda967c3 514 SUPERFAMILY SSF54814 285 346 8.5E-16 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 DB34_02900 2b3823e8bd9c4bc9eb7ebde4eda967c3 514 SUPERFAMILY SSF54814 204 281 5.75E-31 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 DB34_02900 2b3823e8bd9c4bc9eb7ebde4eda967c3 514 Gene3D G3DSA:3.30.1480.10 7 132 1.8E-41 T 11-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 DB34_02900 2b3823e8bd9c4bc9eb7ebde4eda967c3 514 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 10 346 1.1E-133 T 11-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 DB34_07220 96f929f96fd3822d5160fbd1022bc10a 605 SUPERFAMILY SSF54980 399 513 1.49E-27 T 11-10-2018 IPR035647 EF-G domain III/V-like DB34_07220 96f929f96fd3822d5160fbd1022bc10a 605 Gene3D G3DSA:3.40.50.300 1 196 3.4E-63 T 11-10-2018 DB34_07220 96f929f96fd3822d5160fbd1022bc10a 605 Gene3D G3DSA:2.40.50.250 483 599 3.5E-130 T 11-10-2018 DB34_07220 96f929f96fd3822d5160fbd1022bc10a 605 Pfam PF00009 Elongation factor Tu GTP binding domain 2 193 5.5E-55 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB34_07220 96f929f96fd3822d5160fbd1022bc10a 605 Gene3D G3DSA:3.30.70.870 305 590 3.5E-130 T 11-10-2018 DB34_07220 96f929f96fd3822d5160fbd1022bc10a 605 Pfam PF00679 Elongation factor G C-terminus 398 480 2.1E-21 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like DB34_07220 96f929f96fd3822d5160fbd1022bc10a 605 SUPERFAMILY SSF54980 302 386 2.34E-12 T 11-10-2018 IPR035647 EF-G domain III/V-like DB34_07220 96f929f96fd3822d5160fbd1022bc10a 605 Pfam PF03144 Elongation factor Tu domain 2 217 287 3.9E-10 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 DB34_07220 96f929f96fd3822d5160fbd1022bc10a 605 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 2 148 1.0E-24 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DB34_07220 96f929f96fd3822d5160fbd1022bc10a 605 SUPERFAMILY SSF52540 2 205 3.16E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_07220 96f929f96fd3822d5160fbd1022bc10a 605 SUPERFAMILY SSF50447 150 298 1.08E-27 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DB34_07220 96f929f96fd3822d5160fbd1022bc10a 605 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site DB34_07220 96f929f96fd3822d5160fbd1022bc10a 605 Gene3D G3DSA:3.30.70.240 388 482 3.5E-130 T 11-10-2018 DB34_07220 96f929f96fd3822d5160fbd1022bc10a 605 PRINTS PR00315 GTP-binding elongation factor signature 49 57 1.4E-15 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB34_07220 96f929f96fd3822d5160fbd1022bc10a 605 PRINTS PR00315 GTP-binding elongation factor signature 85 96 1.4E-15 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB34_07220 96f929f96fd3822d5160fbd1022bc10a 605 PRINTS PR00315 GTP-binding elongation factor signature 5 18 1.4E-15 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB34_07220 96f929f96fd3822d5160fbd1022bc10a 605 PRINTS PR00315 GTP-binding elongation factor signature 121 130 1.4E-15 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB34_07220 96f929f96fd3822d5160fbd1022bc10a 605 PRINTS PR00315 GTP-binding elongation factor signature 69 79 1.4E-15 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB34_07220 96f929f96fd3822d5160fbd1022bc10a 605 Gene3D G3DSA:2.40.30.10 197 298 5.2E-29 T 11-10-2018 DB34_07220 96f929f96fd3822d5160fbd1022bc10a 605 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 3 599 2.7E-282 T 11-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 DB34_12700 4f527fea359ecfc05abeae4c9f594780 127 SUPERFAMILY SSF50104 2 120 4.01E-45 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily DB34_12700 4f527fea359ecfc05abeae4c9f594780 127 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 1 118 31.167 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_12700 4f527fea359ecfc05abeae4c9f594780 127 PRINTS PR00061 Ribosomal protein L19 signature 92 117 3.3E-35 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_12700 4f527fea359ecfc05abeae4c9f594780 127 PRINTS PR00061 Ribosomal protein L19 signature 8 37 3.3E-35 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_12700 4f527fea359ecfc05abeae4c9f594780 127 PRINTS PR00061 Ribosomal protein L19 signature 38 67 3.3E-35 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_12700 4f527fea359ecfc05abeae4c9f594780 127 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 2 117 1.4E-46 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_12700 4f527fea359ecfc05abeae4c9f594780 127 ProSitePatterns PS01015 Ribosomal protein L19 signature. 90 105 - T 11-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_12700 4f527fea359ecfc05abeae4c9f594780 127 Gene3D G3DSA:2.30.30.790 2 119 9.9E-18 T 11-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_12700 4f527fea359ecfc05abeae4c9f594780 127 Pfam PF01245 Ribosomal protein L19 3 117 1.8E-47 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_12700 4f527fea359ecfc05abeae4c9f594780 127 PIRSF PIRSF002191 1 126 5.5E-52 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_10345 34c9b0694e784a0603e637f6797a065b 456 Pfam PF01979 Amidohydrolase family 55 425 1.2E-55 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 DB34_10345 34c9b0694e784a0603e637f6797a065b 456 Gene3D G3DSA:2.30.40.10 22 425 2.0E-108 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DB34_10345 34c9b0694e784a0603e637f6797a065b 456 SUPERFAMILY SSF51338 351 454 1.06E-23 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DB34_10345 34c9b0694e784a0603e637f6797a065b 456 Gene3D G3DSA:3.20.20.140 59 377 2.0E-108 T 11-10-2018 DB34_10345 34c9b0694e784a0603e637f6797a065b 456 SUPERFAMILY SSF51556 58 376 2.07E-85 T 11-10-2018 IPR032466 Metal-dependent hydrolase DB34_10345 34c9b0694e784a0603e637f6797a065b 456 SUPERFAMILY SSF51338 1 67 1.25E-13 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DB34_10135 f64feca8a3d3c43f5509dc4360f0bb4c 477 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 273 300 1.5E-44 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like DB34_10135 f64feca8a3d3c43f5509dc4360f0bb4c 477 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 239 253 1.5E-44 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like DB34_10135 f64feca8a3d3c43f5509dc4360f0bb4c 477 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 176 196 1.5E-44 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like DB34_10135 f64feca8a3d3c43f5509dc4360f0bb4c 477 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 435 454 1.5E-44 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like DB34_10135 f64feca8a3d3c43f5509dc4360f0bb4c 477 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 207 221 1.5E-44 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like DB34_10135 f64feca8a3d3c43f5509dc4360f0bb4c 477 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 22 476 31.172 T 11-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 DB34_10135 f64feca8a3d3c43f5509dc4360f0bb4c 477 SMART SM00760 385 454 1.7E-40 T 11-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 DB34_10135 f64feca8a3d3c43f5509dc4360f0bb4c 477 SUPERFAMILY SSF52540 144 353 1.27E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_10135 f64feca8a3d3c43f5509dc4360f0bb4c 477 SMART SM00382 175 378 2.9E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_10135 f64feca8a3d3c43f5509dc4360f0bb4c 477 ProSitePatterns PS01008 DnaA protein signature. 435 454 - T 11-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 DB34_10135 f64feca8a3d3c43f5509dc4360f0bb4c 477 Pfam PF00308 Bacterial dnaA protein 142 358 3.8E-84 T 11-10-2018 IPR013317 Chromosomal replication initiator protein DnaA DB34_10135 f64feca8a3d3c43f5509dc4360f0bb4c 477 Gene3D G3DSA:1.10.8.60 308 377 5.1E-21 T 11-10-2018 DB34_10135 f64feca8a3d3c43f5509dc4360f0bb4c 477 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 386 454 7.4E-30 T 11-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 DB34_10135 f64feca8a3d3c43f5509dc4360f0bb4c 477 Gene3D G3DSA:3.40.50.300 129 306 2.1E-49 T 11-10-2018 DB34_10135 f64feca8a3d3c43f5509dc4360f0bb4c 477 Pfam PF11638 DnaA N-terminal domain 23 85 1.3E-17 T 11-10-2018 IPR024633 DnaA N-terminal domain DB34_10135 f64feca8a3d3c43f5509dc4360f0bb4c 477 Gene3D G3DSA:1.10.1750.10 378 476 6.2E-34 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 DB34_10135 f64feca8a3d3c43f5509dc4360f0bb4c 477 Gene3D G3DSA:3.30.300.180 22 128 7.6E-12 T 11-10-2018 IPR038454 DnaA, N-terminal domain superfamily DB34_10135 f64feca8a3d3c43f5509dc4360f0bb4c 477 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 25 475 3.5E-162 T 11-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 DB34_10135 f64feca8a3d3c43f5509dc4360f0bb4c 477 SUPERFAMILY SSF48295 372 476 3.4E-37 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 DB34_02955 67fcb1ff9b470ba265ed1c6a55cfa074 222 PIRSF PIRSF002764 1 222 2.9E-73 T 11-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria DB34_02955 67fcb1ff9b470ba265ed1c6a55cfa074 222 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 8 218 3.4E-62 T 11-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria DB34_02955 67fcb1ff9b470ba265ed1c6a55cfa074 222 Pfam PF03379 CcmB protein 5 218 1.1E-63 T 11-10-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 DB34_02955 67fcb1ff9b470ba265ed1c6a55cfa074 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 103 121 9.0E-52 T 11-10-2018 DB34_02955 67fcb1ff9b470ba265ed1c6a55cfa074 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 78 101 9.0E-52 T 11-10-2018 DB34_02955 67fcb1ff9b470ba265ed1c6a55cfa074 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 55 72 9.0E-52 T 11-10-2018 DB34_02955 67fcb1ff9b470ba265ed1c6a55cfa074 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 29 50 9.0E-52 T 11-10-2018 DB34_02955 67fcb1ff9b470ba265ed1c6a55cfa074 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 158 177 9.0E-52 T 11-10-2018 DB34_02955 67fcb1ff9b470ba265ed1c6a55cfa074 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 195 218 9.0E-52 T 11-10-2018 DB34_12420 d6d23534a9cb7c483515563323a04eb4 162 SUPERFAMILY SSF117916 64 160 2.68E-32 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily DB34_12420 d6d23534a9cb7c483515563323a04eb4 162 TIGRFAM TIGR02945 SUF_assoc: FeS assembly SUF system protein 66 162 1.9E-45 T 11-10-2018 IPR014291 SUF system FeS cluster assembly associated DB34_12420 d6d23534a9cb7c483515563323a04eb4 162 Gene3D G3DSA:3.30.300.130 61 161 9.4E-36 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily DB34_12420 d6d23534a9cb7c483515563323a04eb4 162 Pfam PF01883 Iron-sulfur cluster assembly protein 66 140 3.2E-21 T 11-10-2018 IPR002744 MIP18 family-like DB34_04540 c3b12968a0dc940cfea0d45f04a618e1 465 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 325 9.6E-67 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DB34_04540 c3b12968a0dc940cfea0d45f04a618e1 465 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 11-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 DB34_04540 c3b12968a0dc940cfea0d45f04a618e1 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 406 421 5.1E-65 T 11-10-2018 DB34_04540 c3b12968a0dc940cfea0d45f04a618e1 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 428 448 5.1E-65 T 11-10-2018 DB34_04540 c3b12968a0dc940cfea0d45f04a618e1 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 5.1E-65 T 11-10-2018 DB34_04540 c3b12968a0dc940cfea0d45f04a618e1 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 143 152 5.1E-65 T 11-10-2018 DB34_04540 c3b12968a0dc940cfea0d45f04a618e1 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 262 276 5.1E-65 T 11-10-2018 DB34_04540 c3b12968a0dc940cfea0d45f04a618e1 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 305 312 5.1E-65 T 11-10-2018 DB34_04540 c3b12968a0dc940cfea0d45f04a618e1 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 5.1E-65 T 11-10-2018 DB34_04540 c3b12968a0dc940cfea0d45f04a618e1 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 342 363 5.1E-65 T 11-10-2018 DB34_04540 c3b12968a0dc940cfea0d45f04a618e1 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 5.1E-65 T 11-10-2018 DB34_04540 c3b12968a0dc940cfea0d45f04a618e1 465 Gene3D G3DSA:3.30.390.30 345 464 2.0E-40 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 DB34_04540 c3b12968a0dc940cfea0d45f04a618e1 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 1.8E-31 T 11-10-2018 DB34_04540 c3b12968a0dc940cfea0d45f04a618e1 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 140 158 1.8E-31 T 11-10-2018 DB34_04540 c3b12968a0dc940cfea0d45f04a618e1 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 277 1.8E-31 T 11-10-2018 DB34_04540 c3b12968a0dc940cfea0d45f04a618e1 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.8E-31 T 11-10-2018 DB34_04540 c3b12968a0dc940cfea0d45f04a618e1 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 290 312 1.8E-31 T 11-10-2018 DB34_04540 c3b12968a0dc940cfea0d45f04a618e1 465 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 453 5.3E-31 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 DB34_04540 c3b12968a0dc940cfea0d45f04a618e1 465 SUPERFAMILY SSF51905 1 334 1.3E-54 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_04540 c3b12968a0dc940cfea0d45f04a618e1 465 SUPERFAMILY SSF55424 343 457 9.97E-31 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 DB34_04540 c3b12968a0dc940cfea0d45f04a618e1 465 PIRSF PIRSF000350 1 455 1.7E-85 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 DB34_04540 c3b12968a0dc940cfea0d45f04a618e1 465 Gene3D G3DSA:3.50.50.60 152 268 3.9E-113 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_04540 c3b12968a0dc940cfea0d45f04a618e1 465 Gene3D G3DSA:3.50.50.60 5 325 3.9E-113 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_06050 88371d44a331e3970d173992d210a033 723 Pfam PF00593 TonB dependent receptor 260 721 1.4E-39 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel DB34_06050 88371d44a331e3970d173992d210a033 723 Gene3D G3DSA:2.40.170.20 210 723 2.3E-83 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DB34_06050 88371d44a331e3970d173992d210a033 723 Gene3D G3DSA:2.170.130.10 77 203 1.3E-26 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily DB34_06050 88371d44a331e3970d173992d210a033 723 Pfam PF07715 TonB-dependent Receptor Plug Domain 92 198 7.9E-22 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain DB34_06050 88371d44a331e3970d173992d210a033 723 SUPERFAMILY SSF56935 79 723 3.66E-104 T 11-10-2018 DB34_05260 40de1392ea387c9774d4daae38e71ff1 382 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 53 271 1.4E-59 T 11-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 DB34_05260 40de1392ea387c9774d4daae38e71ff1 382 SUPERFAMILY SSF56601 33 288 1.57E-71 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DB34_05260 40de1392ea387c9774d4daae38e71ff1 382 Gene3D G3DSA:3.40.710.10 37 314 1.3E-77 T 11-10-2018 DB34_05260 40de1392ea387c9774d4daae38e71ff1 382 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 130 147 7.2E-10 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DB34_05260 40de1392ea387c9774d4daae38e71ff1 382 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 158 171 7.2E-10 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DB34_05260 40de1392ea387c9774d4daae38e71ff1 382 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 77 88 7.2E-10 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DB34_10385 f2a1728066ca7197f61c2df22353e7fe 441 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 52 432 6.2E-110 T 11-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 DB34_10385 f2a1728066ca7197f61c2df22353e7fe 441 Gene3D G3DSA:3.30.70.360 239 353 6.1E-132 T 11-10-2018 DB34_10385 f2a1728066ca7197f61c2df22353e7fe 441 Pfam PF07687 Peptidase dimerisation domain 243 336 4.5E-5 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain DB34_10385 f2a1728066ca7197f61c2df22353e7fe 441 Pfam PF01546 Peptidase family M20/M25/M40 104 434 5.4E-28 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 DB34_10385 f2a1728066ca7197f61c2df22353e7fe 441 Gene3D G3DSA:3.40.630.10 53 428 6.1E-132 T 11-10-2018 DB34_10385 f2a1728066ca7197f61c2df22353e7fe 441 SUPERFAMILY SSF53187 38 435 2.6E-71 T 11-10-2018 DB34_10385 f2a1728066ca7197f61c2df22353e7fe 441 SUPERFAMILY SSF55031 239 350 1.92E-26 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain DB34_10385 f2a1728066ca7197f61c2df22353e7fe 441 PIRSF PIRSF001235 39 440 2.4E-129 T 11-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 DB34_08160 5ecc5fb420f3f2511e33b35eb745234a 263 Pfam PF02167 Cytochrome C1 family 45 260 3.6E-66 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 DB34_08160 5ecc5fb420f3f2511e33b35eb745234a 263 PRINTS PR00603 Cytochrome C1 signature 63 82 6.7E-38 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 DB34_08160 5ecc5fb420f3f2511e33b35eb745234a 263 PRINTS PR00603 Cytochrome C1 signature 43 62 6.7E-38 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 DB34_08160 5ecc5fb420f3f2511e33b35eb745234a 263 PRINTS PR00603 Cytochrome C1 signature 108 128 6.7E-38 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 DB34_08160 5ecc5fb420f3f2511e33b35eb745234a 263 PRINTS PR00603 Cytochrome C1 signature 141 165 6.7E-38 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 DB34_08160 5ecc5fb420f3f2511e33b35eb745234a 263 PRINTS PR00603 Cytochrome C1 signature 188 207 6.7E-38 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 DB34_08160 5ecc5fb420f3f2511e33b35eb745234a 263 PRINTS PR00603 Cytochrome C1 signature 208 227 6.7E-38 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 DB34_08160 5ecc5fb420f3f2511e33b35eb745234a 263 PRINTS PR00603 Cytochrome C1 signature 227 242 6.7E-38 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 DB34_08160 5ecc5fb420f3f2511e33b35eb745234a 263 SUPERFAMILY SSF46626 38 225 3.12E-47 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DB34_08160 5ecc5fb420f3f2511e33b35eb745234a 263 Gene3D G3DSA:1.10.760.10 35 227 5.4E-62 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DB34_11925 ff7894f029ef4ec1fc6f7faa3e37b11c 559 Gene3D G3DSA:3.40.50.300 336 556 4.5E-65 T 11-10-2018 DB34_11925 ff7894f029ef4ec1fc6f7faa3e37b11c 559 SMART SM00382 363 547 2.9E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_11925 ff7894f029ef4ec1fc6f7faa3e37b11c 559 SUPERFAMILY SSF90123 8 320 6.41E-42 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DB34_11925 ff7894f029ef4ec1fc6f7faa3e37b11c 559 Gene3D G3DSA:1.20.1560.10 3 322 1.3E-34 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DB34_11925 ff7894f029ef4ec1fc6f7faa3e37b11c 559 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 20 542 1.3E-161 T 11-10-2018 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 DB34_11925 ff7894f029ef4ec1fc6f7faa3e37b11c 559 SUPERFAMILY SSF52540 332 549 1.15E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_11925 ff7894f029ef4ec1fc6f7faa3e37b11c 559 Pfam PF00005 ABC transporter 354 500 4.7E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB34_11925 ff7894f029ef4ec1fc6f7faa3e37b11c 559 Pfam PF00664 ABC transporter transmembrane region 25 285 3.4E-19 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DB34_04605 7b54796b1334f05b6bde3bd684e18847 194 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 152 171 - T 11-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB34_04605 7b54796b1334f05b6bde3bd684e18847 194 Pfam PF00213 ATP synthase delta (OSCP) subunit 20 189 5.5E-41 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB34_04605 7b54796b1334f05b6bde3bd684e18847 194 Gene3D G3DSA:1.10.520.20 18 113 1.7E-14 T 11-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB34_04605 7b54796b1334f05b6bde3bd684e18847 194 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 22 188 1.4E-27 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB34_04605 7b54796b1334f05b6bde3bd684e18847 194 SUPERFAMILY SSF47928 17 120 1.57E-15 T 11-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB34_04605 7b54796b1334f05b6bde3bd684e18847 194 PRINTS PR00125 ATP synthase delta subunit signature 19 38 9.5E-25 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB34_04605 7b54796b1334f05b6bde3bd684e18847 194 PRINTS PR00125 ATP synthase delta subunit signature 150 165 9.5E-25 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB34_04605 7b54796b1334f05b6bde3bd684e18847 194 PRINTS PR00125 ATP synthase delta subunit signature 89 100 9.5E-25 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB34_04605 7b54796b1334f05b6bde3bd684e18847 194 PRINTS PR00125 ATP synthase delta subunit signature 100 114 9.5E-25 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB34_04605 7b54796b1334f05b6bde3bd684e18847 194 PRINTS PR00125 ATP synthase delta subunit signature 165 183 9.5E-25 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB34_04605 7b54796b1334f05b6bde3bd684e18847 194 Hamap MF_01416 ATP synthase subunit delta [atpD]. 15 192 17.217 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB34_03605 db5b8bcd8aecb1640a8144777104ca6f 160 Gene3D G3DSA:3.30.1330.60 44 157 1.5E-35 T 11-10-2018 IPR036737 OmpA-like domain superfamily DB34_03605 db5b8bcd8aecb1640a8144777104ca6f 160 PRINTS PR01021 OMPA domain signature 89 104 6.4E-15 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DB34_03605 db5b8bcd8aecb1640a8144777104ca6f 160 PRINTS PR01021 OMPA domain signature 59 81 6.4E-15 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DB34_03605 db5b8bcd8aecb1640a8144777104ca6f 160 PRINTS PR01021 OMPA domain signature 104 120 6.4E-15 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DB34_03605 db5b8bcd8aecb1640a8144777104ca6f 160 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 56 157 5.1E-41 T 11-10-2018 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal GO:0009279 DB34_03605 db5b8bcd8aecb1640a8144777104ca6f 160 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 1 159 29.57 T 11-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 DB34_03605 db5b8bcd8aecb1640a8144777104ca6f 160 Pfam PF00691 OmpA family 58 153 9.8E-20 T 11-10-2018 IPR006665 OmpA-like domain DB34_03605 db5b8bcd8aecb1640a8144777104ca6f 160 SUPERFAMILY SSF103088 48 154 4.58E-32 T 11-10-2018 IPR036737 OmpA-like domain superfamily DB34_05495 d01e57bbc88dce0913c3d52a7457714b 718 ProSitePatterns PS00211 ABC transporters family signature. 630 644 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB34_05495 d01e57bbc88dce0913c3d52a7457714b 718 SMART SM00382 518 702 2.1E-19 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_05495 d01e57bbc88dce0913c3d52a7457714b 718 Gene3D G3DSA:1.20.1560.10 157 472 1.2E-54 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DB34_05495 d01e57bbc88dce0913c3d52a7457714b 718 Pfam PF03412 Peptidase C39 family 16 144 7.3E-39 T 11-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 DB34_05495 d01e57bbc88dce0913c3d52a7457714b 718 Pfam PF00005 ABC transporter 510 658 2.1E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB34_05495 d01e57bbc88dce0913c3d52a7457714b 718 Gene3D G3DSA:3.40.50.300 481 717 1.4E-70 T 11-10-2018 DB34_05495 d01e57bbc88dce0913c3d52a7457714b 718 SUPERFAMILY SSF52540 486 705 7.08E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_05495 d01e57bbc88dce0913c3d52a7457714b 718 Pfam PF00664 ABC transporter transmembrane region 173 437 9.8E-30 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DB34_05495 d01e57bbc88dce0913c3d52a7457714b 718 Gene3D G3DSA:3.90.70.10 7 152 4.6E-43 T 11-10-2018 DB34_05495 d01e57bbc88dce0913c3d52a7457714b 718 SUPERFAMILY SSF90123 151 461 7.06E-53 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DB34_08280 0e42f7edf9d6509b621e86a67fdf7fc4 328 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 4 325 3.5E-116 T 11-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 DB34_08280 0e42f7edf9d6509b621e86a67fdf7fc4 328 Gene3D G3DSA:3.40.50.720 5 251 4.1E-111 T 11-10-2018 DB34_08280 0e42f7edf9d6509b621e86a67fdf7fc4 328 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 251 2.6E-55 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 DB34_08280 0e42f7edf9d6509b621e86a67fdf7fc4 328 Gene3D G3DSA:3.90.25.10 174 305 4.1E-111 T 11-10-2018 DB34_08280 0e42f7edf9d6509b621e86a67fdf7fc4 328 SUPERFAMILY SSF51735 1 326 9.86E-90 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily DB34_02085 a883fe26ebf5b39ce483167dccd06192 700 SMART SM00861 386 560 1.9E-64 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DB34_02085 a883fe26ebf5b39ce483167dccd06192 700 SUPERFAMILY SSF52518 372 562 4.65E-63 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold DB34_02085 a883fe26ebf5b39ce483167dccd06192 700 SUPERFAMILY SSF52518 11 355 6.43E-103 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold DB34_02085 a883fe26ebf5b39ce483167dccd06192 700 Gene3D G3DSA:3.40.50.920 574 696 4.2E-42 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DB34_02085 a883fe26ebf5b39ce483167dccd06192 700 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 24 369 7.2E-132 T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DB34_02085 a883fe26ebf5b39ce483167dccd06192 700 Pfam PF02780 Transketolase, C-terminal domain 584 691 7.5E-9 T 11-10-2018 IPR033248 Transketolase, C-terminal domain DB34_02085 a883fe26ebf5b39ce483167dccd06192 700 TIGRFAM TIGR00232 tktlase_bact: transketolase 27 697 1.2E-251 T 11-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 DB34_02085 a883fe26ebf5b39ce483167dccd06192 700 Gene3D G3DSA:3.40.50.970 363 568 3.6E-74 T 11-10-2018 DB34_02085 a883fe26ebf5b39ce483167dccd06192 700 Pfam PF02779 Transketolase, pyrimidine binding domain 389 559 2.0E-40 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DB34_02085 a883fe26ebf5b39ce483167dccd06192 700 SUPERFAMILY SSF52922 570 698 9.68E-42 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DB34_02085 a883fe26ebf5b39ce483167dccd06192 700 Gene3D G3DSA:3.40.50.970 21 361 7.2E-118 T 11-10-2018 DB34_02085 a883fe26ebf5b39ce483167dccd06192 700 ProSitePatterns PS00801 Transketolase signature 1. 32 52 - T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DB34_05805 164de5bed903da3000ca7578489c47d2 441 SUPERFAMILY SSF53720 33 440 2.75E-106 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DB34_05805 164de5bed903da3000ca7578489c47d2 441 Pfam PF00171 Aldehyde dehydrogenase family 35 305 6.0E-11 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DB34_05805 164de5bed903da3000ca7578489c47d2 441 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 32 440 38.96 T 11-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 DB34_05805 164de5bed903da3000ca7578489c47d2 441 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 347 368 - T 11-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 DB34_05805 164de5bed903da3000ca7578489c47d2 441 Gene3D G3DSA:3.40.605.10 45 435 9.6E-152 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DB34_05805 164de5bed903da3000ca7578489c47d2 441 Gene3D G3DSA:3.40.309.10 250 398 9.6E-152 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DB34_05805 164de5bed903da3000ca7578489c47d2 441 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 40 429 1.6E-130 T 11-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 DB34_05805 164de5bed903da3000ca7578489c47d2 441 PIRSF PIRSF000151 26 441 4.2E-163 T 11-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 DB34_00990 b3407d517d8a31cc685952dd81ce6aac 278 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 7 84 2.3E-22 T 11-10-2018 IPR013589 Bacterial transglutaminase-like, N-terminal DB34_00990 b3407d517d8a31cc685952dd81ce6aac 278 Gene3D G3DSA:3.10.620.30 106 265 2.1E-31 T 11-10-2018 DB34_00990 b3407d517d8a31cc685952dd81ce6aac 278 Pfam PF01841 Transglutaminase-like superfamily 124 229 6.3E-22 T 11-10-2018 IPR002931 Transglutaminase-like DB34_00990 b3407d517d8a31cc685952dd81ce6aac 278 SMART SM00460 162 232 9.8E-16 T 11-10-2018 IPR002931 Transglutaminase-like DB34_00990 b3407d517d8a31cc685952dd81ce6aac 278 SUPERFAMILY SSF54001 9 263 8.72E-45 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily DB34_04620 bcc20ce850697cbd62e778253af3db6b 490 Gene3D G3DSA:1.10.1140.10 371 490 8.4E-59 T 11-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DB34_04620 bcc20ce850697cbd62e778253af3db6b 490 PIRSF PIRSF039072 1 490 1.3E-274 T 11-10-2018 DB34_04620 bcc20ce850697cbd62e778253af3db6b 490 SMART SM00382 157 431 1.7E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_04620 bcc20ce850697cbd62e778253af3db6b 490 Gene3D G3DSA:3.40.50.300 91 370 3.7E-118 T 11-10-2018 DB34_04620 bcc20ce850697cbd62e778253af3db6b 490 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 359 368 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DB34_04620 bcc20ce850697cbd62e778253af3db6b 490 SUPERFAMILY SSF50615 19 89 2.16E-23 T 11-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DB34_04620 bcc20ce850697cbd62e778253af3db6b 490 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 19 486 9.7E-256 T 11-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 DB34_04620 bcc20ce850697cbd62e778253af3db6b 490 SUPERFAMILY SSF47917 371 487 6.8E-54 T 11-10-2018 DB34_04620 bcc20ce850697cbd62e778253af3db6b 490 Hamap MF_01347 ATP synthase subunit beta [atpB]. 17 486 57.561 T 11-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 DB34_04620 bcc20ce850697cbd62e778253af3db6b 490 Gene3D G3DSA:2.40.10.170 6 90 4.8E-31 T 11-10-2018 DB34_04620 bcc20ce850697cbd62e778253af3db6b 490 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 145 368 3.1E-64 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DB34_04620 bcc20ce850697cbd62e778253af3db6b 490 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 22 88 1.8E-23 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DB34_04620 bcc20ce850697cbd62e778253af3db6b 490 SUPERFAMILY SSF52540 92 373 6.23E-90 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_06190 c5bce8a44cfd897b9061765c549c1c28 298 Gene3D G3DSA:3.20.20.100 21 297 7.0E-89 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DB34_06190 c5bce8a44cfd897b9061765c549c1c28 298 PIRSF PIRSF000097 23 297 8.5E-65 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DB34_06190 c5bce8a44cfd897b9061765c549c1c28 298 SUPERFAMILY SSF51430 26 283 1.44E-75 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DB34_06190 c5bce8a44cfd897b9061765c549c1c28 298 PRINTS PR00069 Aldo-keto reductase signature 178 207 6.7E-36 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DB34_06190 c5bce8a44cfd897b9061765c549c1c28 298 PRINTS PR00069 Aldo-keto reductase signature 56 80 6.7E-36 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DB34_06190 c5bce8a44cfd897b9061765c549c1c28 298 PRINTS PR00069 Aldo-keto reductase signature 112 130 6.7E-36 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DB34_06190 c5bce8a44cfd897b9061765c549c1c28 298 PRINTS PR00069 Aldo-keto reductase signature 216 240 6.7E-36 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DB34_06190 c5bce8a44cfd897b9061765c549c1c28 298 PRINTS PR00069 Aldo-keto reductase signature 144 161 6.7E-36 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DB34_06190 c5bce8a44cfd897b9061765c549c1c28 298 Pfam PF00248 Aldo/keto reductase family 50 279 8.7E-36 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain DB34_01460 bf0b48f2eaa0304d60ba32c58555f514 366 PIRSF PIRSF006468 6 366 8.0E-131 T 11-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 DB34_01460 bf0b48f2eaa0304d60ba32c58555f514 366 Gene3D G3DSA:3.30.470.10 32 361 1.0E-134 T 11-10-2018 DB34_01460 bf0b48f2eaa0304d60ba32c58555f514 366 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 51 364 4.3E-123 T 11-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 DB34_01460 bf0b48f2eaa0304d60ba32c58555f514 366 SUPERFAMILY SSF56752 6 362 2.09E-112 T 11-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 DB34_01460 bf0b48f2eaa0304d60ba32c58555f514 366 Gene3D G3DSA:3.20.10.10 178 348 1.0E-134 T 11-10-2018 DB34_01460 bf0b48f2eaa0304d60ba32c58555f514 366 Pfam PF01063 Amino-transferase class IV 77 319 2.7E-34 T 11-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 DB34_11195 43ca815583aa54e5154bcdc369401451 408 SUPERFAMILY SSF102114 143 359 1.57E-12 T 11-10-2018 DB34_11195 43ca815583aa54e5154bcdc369401451 408 Pfam PF04055 Radical SAM superfamily 153 327 1.5E-14 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DB34_11195 43ca815583aa54e5154bcdc369401451 408 PIRSF PIRSF006004 40 407 1.6E-137 T 11-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 DB34_11195 43ca815583aa54e5154bcdc369401451 408 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 47 398 73.642 T 11-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 DB34_11195 43ca815583aa54e5154bcdc369401451 408 Gene3D G3DSA:1.10.150.530 33 107 6.5E-20 T 11-10-2018 DB34_11195 43ca815583aa54e5154bcdc369401451 408 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 46 396 7.8E-122 T 11-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 DB34_11195 43ca815583aa54e5154bcdc369401451 408 Gene3D G3DSA:3.20.20.70 109 383 2.6E-102 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB34_08705 8a789756b5dd9a47f268733cbdc1d2f2 132 Pfam PF00410 Ribosomal protein S8 5 132 2.3E-45 T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_08705 8a789756b5dd9a47f268733cbdc1d2f2 132 SUPERFAMILY SSF56047 3 132 5.23E-44 T 11-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_08705 8a789756b5dd9a47f268733cbdc1d2f2 132 Gene3D G3DSA:3.30.1490.10 75 131 4.0E-24 T 11-10-2018 DB34_08705 8a789756b5dd9a47f268733cbdc1d2f2 132 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 132 30.165 T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_08705 8a789756b5dd9a47f268733cbdc1d2f2 132 ProSitePatterns PS00053 Ribosomal protein S8 signature. 102 119 - T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_08705 8a789756b5dd9a47f268733cbdc1d2f2 132 Gene3D G3DSA:3.30.1370.30 3 74 5.9E-24 T 11-10-2018 DB34_03140 029f12d605c9b4b7c00dcf0e8f36afd7 372 Pfam PF04607 Region found in RelA / SpoT proteins 91 202 1.8E-18 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 DB34_03140 029f12d605c9b4b7c00dcf0e8f36afd7 372 SUPERFAMILY SSF81301 54 203 2.45E-24 T 11-10-2018 DB34_03140 029f12d605c9b4b7c00dcf0e8f36afd7 372 SMART SM00954 91 211 1.0E-18 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 DB34_03140 029f12d605c9b4b7c00dcf0e8f36afd7 372 Gene3D G3DSA:3.30.460.10 67 192 9.1E-26 T 11-10-2018 DB34_00340 fc656fd6bc2fa969bf2df1590a26e13c 490 Gene3D G3DSA:3.30.360.10 178 474 3.8E-158 T 11-10-2018 DB34_00340 fc656fd6bc2fa969bf2df1590a26e13c 490 SUPERFAMILY SSF51735 5 191 1.32E-50 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily DB34_00340 fc656fd6bc2fa969bf2df1590a26e13c 490 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 9 486 77.421 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DB34_00340 fc656fd6bc2fa969bf2df1590a26e13c 490 SUPERFAMILY SSF55347 178 486 3.92E-104 T 11-10-2018 DB34_00340 fc656fd6bc2fa969bf2df1590a26e13c 490 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 178 184 - T 11-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DB34_00340 fc656fd6bc2fa969bf2df1590a26e13c 490 PIRSF PIRSF000110 1 488 1.0E-161 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DB34_00340 fc656fd6bc2fa969bf2df1590a26e13c 490 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 144 157 6.5E-46 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DB34_00340 fc656fd6bc2fa969bf2df1590a26e13c 490 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 168 196 6.5E-46 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DB34_00340 fc656fd6bc2fa969bf2df1590a26e13c 490 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 329 355 6.5E-46 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DB34_00340 fc656fd6bc2fa969bf2df1590a26e13c 490 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 220 237 6.5E-46 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DB34_00340 fc656fd6bc2fa969bf2df1590a26e13c 490 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 238 254 6.5E-46 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DB34_00340 fc656fd6bc2fa969bf2df1590a26e13c 490 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 13 188 2.1E-53 T 11-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DB34_00340 fc656fd6bc2fa969bf2df1590a26e13c 490 Gene3D G3DSA:3.40.50.720 12 434 3.8E-158 T 11-10-2018 DB34_00340 fc656fd6bc2fa969bf2df1590a26e13c 490 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 10 486 1.4E-162 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DB34_00340 fc656fd6bc2fa969bf2df1590a26e13c 490 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 190 485 2.7E-106 T 11-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DB34_05320 f6d4d77a4b33bddeccae852494366e55 380 SUPERFAMILY SSF57938 136 214 8.24E-19 T 11-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily DB34_05320 f6d4d77a4b33bddeccae852494366e55 380 Gene3D G3DSA:2.60.260.20 257 369 2.5E-28 T 11-10-2018 DB34_05320 f6d4d77a4b33bddeccae852494366e55 380 SUPERFAMILY SSF49493 262 348 6.93E-23 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 DB34_05320 f6d4d77a4b33bddeccae852494366e55 380 SUPERFAMILY SSF49493 116 264 2.88E-19 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 DB34_05320 f6d4d77a4b33bddeccae852494366e55 380 Pfam PF00684 DnaJ central domain 149 209 4.8E-13 T 11-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 DB34_05320 f6d4d77a4b33bddeccae852494366e55 380 Gene3D G3DSA:2.10.230.10 149 210 2.5E-37 T 11-10-2018 DB34_05320 f6d4d77a4b33bddeccae852494366e55 380 PRINTS PR00625 DnaJ domain signature 8 26 6.4E-31 T 11-10-2018 IPR001623 DnaJ domain DB34_05320 f6d4d77a4b33bddeccae852494366e55 380 PRINTS PR00625 DnaJ domain signature 43 63 6.4E-31 T 11-10-2018 IPR001623 DnaJ domain DB34_05320 f6d4d77a4b33bddeccae852494366e55 380 PRINTS PR00625 DnaJ domain signature 63 82 6.4E-31 T 11-10-2018 IPR001623 DnaJ domain DB34_05320 f6d4d77a4b33bddeccae852494366e55 380 PRINTS PR00625 DnaJ domain signature 26 41 6.4E-31 T 11-10-2018 IPR001623 DnaJ domain DB34_05320 f6d4d77a4b33bddeccae852494366e55 380 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 3 375 40.621 T 11-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 DB34_05320 f6d4d77a4b33bddeccae852494366e55 380 ProSitePatterns PS00636 Nt-dnaJ domain signature. 48 67 - T 11-10-2018 IPR018253 DnaJ domain, conserved site DB34_05320 f6d4d77a4b33bddeccae852494366e55 380 Pfam PF01556 DnaJ C terminal domain 122 337 1.5E-41 T 11-10-2018 IPR002939 Chaperone DnaJ, C-terminal DB34_05320 f6d4d77a4b33bddeccae852494366e55 380 Gene3D G3DSA:1.10.287.110 2 117 2.7E-38 T 11-10-2018 IPR036869 Chaperone J-domain superfamily DB34_05320 f6d4d77a4b33bddeccae852494366e55 380 SMART SM00271 5 63 3.3E-32 T 11-10-2018 IPR001623 DnaJ domain DB34_05320 f6d4d77a4b33bddeccae852494366e55 380 Pfam PF00226 DnaJ domain 6 68 6.6E-28 T 11-10-2018 IPR001623 DnaJ domain DB34_05320 f6d4d77a4b33bddeccae852494366e55 380 SUPERFAMILY SSF46565 3 105 1.22E-36 T 11-10-2018 IPR036869 Chaperone J-domain superfamily DB34_05320 f6d4d77a4b33bddeccae852494366e55 380 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 6 354 3.4E-132 T 11-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 DB34_05320 f6d4d77a4b33bddeccae852494366e55 380 Gene3D G3DSA:2.60.260.20 119 252 2.5E-37 T 11-10-2018 DB34_04400 ef83eb698d5ee1fc7c6084931644c85e 529 Gene3D G3DSA:3.30.160.270 408 516 2.9E-13 T 11-10-2018 DB34_04400 ef83eb698d5ee1fc7c6084931644c85e 529 Gene3D G3DSA:3.20.20.70 16 294 1.5E-101 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB34_04400 ef83eb698d5ee1fc7c6084931644c85e 529 SUPERFAMILY SSF110921 419 515 4.18E-24 T 11-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DB34_04400 ef83eb698d5ee1fc7c6084931644c85e 529 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 28 44 - T 11-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DB34_04400 ef83eb698d5ee1fc7c6084931644c85e 529 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 18 525 40.416 T 11-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DB34_04400 ef83eb698d5ee1fc7c6084931644c85e 529 Pfam PF08502 LeuA allosteric (dimerisation) domain 388 516 7.2E-32 T 11-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DB34_04400 ef83eb698d5ee1fc7c6084931644c85e 529 Pfam PF00682 HMGL-like 21 289 7.2E-90 T 11-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 DB34_04400 ef83eb698d5ee1fc7c6084931644c85e 529 Gene3D G3DSA:1.10.238.260 297 407 5.0E-38 T 11-10-2018 DB34_04400 ef83eb698d5ee1fc7c6084931644c85e 529 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 216 229 - T 11-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DB34_04400 ef83eb698d5ee1fc7c6084931644c85e 529 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 20 513 1.8E-201 T 11-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DB34_04400 ef83eb698d5ee1fc7c6084931644c85e 529 SMART SM00917 387 516 7.8E-38 T 11-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DB34_04400 ef83eb698d5ee1fc7c6084931644c85e 529 SUPERFAMILY SSF51569 15 308 1.23E-94 T 11-10-2018 DB34_09815 44a2556265d872bafe8d2f39dab62d59 676 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 292 468 4.9E-57 T 11-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 DB34_09815 44a2556265d872bafe8d2f39dab62d59 676 SUPERFAMILY SSF53756 310 672 2.92E-8 T 11-10-2018 DB34_09815 44a2556265d872bafe8d2f39dab62d59 676 Gene3D G3DSA:3.40.50.2000 473 657 3.8E-41 T 11-10-2018 DB34_09815 44a2556265d872bafe8d2f39dab62d59 676 ProDom PD032436 LIPOPROTEIN UNCHARACTERIZED PROBABLE CJ0457C SIMILAR TRANSFERASE BACTERIA PRECURSOR SIGNAL CC0304 54 149 7.0E-16 T 11-10-2018 IPR007172 Domain of unknown function DUF374 DB34_09815 44a2556265d872bafe8d2f39dab62d59 676 Gene3D G3DSA:3.40.50.11720 290 467 6.0E-45 T 11-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 DB34_09815 44a2556265d872bafe8d2f39dab62d59 676 Pfam PF04028 Domain of unknown function (DUF374) 79 150 2.5E-20 T 11-10-2018 IPR007172 Domain of unknown function DUF374 DB34_08895 b3324586e6d8c0b2d143a1b2daa5b45b 488 Gene3D G3DSA:2.70.70.10 363 488 1.2E-20 T 11-10-2018 IPR011055 Duplicated hybrid motif DB34_08895 b3324586e6d8c0b2d143a1b2daa5b45b 488 Pfam PF01551 Peptidase family M23 393 484 8.4E-17 T 11-10-2018 IPR016047 Peptidase M23 DB34_08895 b3324586e6d8c0b2d143a1b2daa5b45b 488 SUPERFAMILY SSF51261 314 488 1.26E-24 T 11-10-2018 IPR011055 Duplicated hybrid motif DB34_10160 4dd5a775f102cb195f6280576192db9c 159 Gene3D G3DSA:2.70.40.10 6 156 4.1E-54 T 11-10-2018 IPR036157 dUTPase-like superfamily DB34_10160 4dd5a775f102cb195f6280576192db9c 159 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 11 156 34.546 T 11-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 DB34_10160 4dd5a775f102cb195f6280576192db9c 159 SUPERFAMILY SSF51283 13 156 6.67E-53 T 11-10-2018 IPR036157 dUTPase-like superfamily DB34_10160 4dd5a775f102cb195f6280576192db9c 159 Pfam PF00692 dUTPase 25 155 6.4E-30 T 11-10-2018 IPR029054 dUTPase-like DB34_10160 4dd5a775f102cb195f6280576192db9c 159 TIGRFAM TIGR00576 dut: dUTP diphosphatase 15 155 1.9E-53 T 11-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 DB34_01995 103dc10e7767281fb3acdee26d2a6be7 466 Pfam PF00083 Sugar (and other) transporter 24 453 1.9E-107 T 11-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 DB34_01995 103dc10e7767281fb3acdee26d2a6be7 466 ProSitePatterns PS00217 Sugar transport proteins signature 2. 118 143 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 DB34_01995 103dc10e7767281fb3acdee26d2a6be7 466 Gene3D G3DSA:1.20.1250.20 8 457 1.5E-116 T 11-10-2018 DB34_01995 103dc10e7767281fb3acdee26d2a6be7 466 PRINTS PR00171 Sugar transporter signature 378 390 3.6E-21 T 11-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 DB34_01995 103dc10e7767281fb3acdee26d2a6be7 466 PRINTS PR00171 Sugar transporter signature 266 276 3.6E-21 T 11-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 DB34_01995 103dc10e7767281fb3acdee26d2a6be7 466 PRINTS PR00171 Sugar transporter signature 30 40 3.6E-21 T 11-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 DB34_01995 103dc10e7767281fb3acdee26d2a6be7 466 PRINTS PR00171 Sugar transporter signature 355 376 3.6E-21 T 11-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 DB34_01995 103dc10e7767281fb3acdee26d2a6be7 466 PRINTS PR00171 Sugar transporter signature 113 132 3.6E-21 T 11-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 DB34_01995 103dc10e7767281fb3acdee26d2a6be7 466 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 18 450 9.9E-116 T 11-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 DB34_01995 103dc10e7767281fb3acdee26d2a6be7 466 SUPERFAMILY SSF103473 22 451 7.32E-65 T 11-10-2018 IPR036259 MFS transporter superfamily DB34_01170 98ca2bb05fbe466886343737985e67cf 585 Gene3D G3DSA:2.60.40.10 6 101 9.5E-22 T 11-10-2018 IPR013783 Immunoglobulin-like fold DB34_01170 98ca2bb05fbe466886343737985e67cf 585 SUPERFAMILY SSF51445 92 506 1.32E-98 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily DB34_01170 98ca2bb05fbe466886343737985e67cf 585 Pfam PF11941 Domain of unknown function (DUF3459) 497 579 2.5E-10 T 11-10-2018 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) DB34_01170 98ca2bb05fbe466886343737985e67cf 585 Pfam PF00128 Alpha amylase, catalytic domain 129 213 1.1E-11 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DB34_01170 98ca2bb05fbe466886343737985e67cf 585 Pfam PF00128 Alpha amylase, catalytic domain 230 424 9.3E-6 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DB34_01170 98ca2bb05fbe466886343737985e67cf 585 Gene3D G3DSA:3.20.20.80 105 505 1.5E-156 T 11-10-2018 DB34_01170 98ca2bb05fbe466886343737985e67cf 585 SMART SM00642 125 465 1.6E-8 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DB34_01170 98ca2bb05fbe466886343737985e67cf 585 PIRSF PIRSF006337 6 573 7.5E-207 T 11-10-2018 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00500+3.2.1.141|MetaCyc: PWY-2661 DB34_01170 98ca2bb05fbe466886343737985e67cf 585 SUPERFAMILY SSF81296 9 95 4.6E-15 T 11-10-2018 IPR014756 Immunoglobulin E-set DB34_01170 98ca2bb05fbe466886343737985e67cf 585 TIGRFAM TIGR02402 trehalose_TreZ: malto-oligosyltrehalose trehalohydrolase 22 552 1.0E-192 T 11-10-2018 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00500+3.2.1.141|MetaCyc: PWY-2661 DB34_01170 98ca2bb05fbe466886343737985e67cf 585 Gene3D G3DSA:1.10.10.760 433 477 1.5E-156 T 11-10-2018 DB34_04340 26b0aa3999135a9de48057bf33e7bbd2 920 SUPERFAMILY SSF53955 79 293 2.56E-68 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily DB34_04340 26b0aa3999135a9de48057bf33e7bbd2 920 Pfam PF00912 Transglycosylase 93 269 1.1E-58 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DB34_04340 26b0aa3999135a9de48057bf33e7bbd2 920 Gene3D G3DSA:1.10.3810.10 93 292 6.4E-69 T 11-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DB34_04340 26b0aa3999135a9de48057bf33e7bbd2 920 Gene3D G3DSA:3.40.710.10 694 858 4.4E-36 T 11-10-2018 DB34_04340 26b0aa3999135a9de48057bf33e7bbd2 920 Gene3D G3DSA:3.40.710.10 454 667 2.3E-61 T 11-10-2018 DB34_04340 26b0aa3999135a9de48057bf33e7bbd2 920 Gene3D G3DSA:3.40.710.10 297 363 7.9E-8 T 11-10-2018 DB34_04340 26b0aa3999135a9de48057bf33e7bbd2 920 Pfam PF00905 Penicillin binding protein transpeptidase domain 473 641 1.0E-23 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 DB34_04340 26b0aa3999135a9de48057bf33e7bbd2 920 Pfam PF00905 Penicillin binding protein transpeptidase domain 716 808 4.5E-10 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 DB34_04340 26b0aa3999135a9de48057bf33e7bbd2 920 SUPERFAMILY SSF56601 251 842 1.78E-120 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DB34_04340 26b0aa3999135a9de48057bf33e7bbd2 920 Pfam PF17092 Penicillin-binding protein OB-like domain 359 471 4.0E-14 T 11-10-2018 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DB34_04340 26b0aa3999135a9de48057bf33e7bbd2 920 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 102 811 5.1E-172 T 11-10-2018 DB34_10280 57bbbddd829a971a5e9ab8d7800e3aba 573 SMART SM00382 379 564 2.7E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_10280 57bbbddd829a971a5e9ab8d7800e3aba 573 Gene3D G3DSA:3.40.50.300 347 572 1.7E-70 T 11-10-2018 DB34_10280 57bbbddd829a971a5e9ab8d7800e3aba 573 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 21 551 1.4E-134 T 11-10-2018 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 DB34_10280 57bbbddd829a971a5e9ab8d7800e3aba 573 Pfam PF00664 ABC transporter transmembrane region 34 269 9.8E-15 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DB34_10280 57bbbddd829a971a5e9ab8d7800e3aba 573 SUPERFAMILY SSF52540 347 568 1.09E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_10280 57bbbddd829a971a5e9ab8d7800e3aba 573 SUPERFAMILY SSF90123 26 333 5.62E-30 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DB34_10280 57bbbddd829a971a5e9ab8d7800e3aba 573 Pfam PF00005 ABC transporter 370 519 1.8E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB34_10280 57bbbddd829a971a5e9ab8d7800e3aba 573 Gene3D G3DSA:1.20.1560.10 3 338 1.1E-22 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DB34_10280 57bbbddd829a971a5e9ab8d7800e3aba 573 ProSitePatterns PS00211 ABC transporters family signature. 491 505 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB34_09175 46dc74d26102cf8e9149b93489bff544 205 Gene3D G3DSA:3.10.290.10 93 188 1.7E-71 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DB34_09175 46dc74d26102cf8e9149b93489bff544 205 Gene3D G3DSA:1.10.1050.10 6 205 1.7E-71 T 11-10-2018 DB34_09175 46dc74d26102cf8e9149b93489bff544 205 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 5 205 2.2E-74 T 11-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 DB34_09175 46dc74d26102cf8e9149b93489bff544 205 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 6 93 1.5E-24 T 11-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 DB34_09175 46dc74d26102cf8e9149b93489bff544 205 Pfam PF01479 S4 domain 94 141 2.7E-17 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_09175 46dc74d26102cf8e9149b93489bff544 205 SMART SM00363 94 158 8.0E-18 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_09175 46dc74d26102cf8e9149b93489bff544 205 SUPERFAMILY SSF55174 4 205 3.01E-63 T 11-10-2018 DB34_09175 46dc74d26102cf8e9149b93489bff544 205 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 205 32.317 T 11-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 DB34_09175 46dc74d26102cf8e9149b93489bff544 205 SMART SM01390 3 93 8.5E-40 T 11-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 DB34_09175 46dc74d26102cf8e9149b93489bff544 205 ProSitePatterns PS00632 Ribosomal protein S4 signature. 92 116 - T 11-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_03835 8f1cb9f5d1ae1f8ecf0a9b5bc9df406f 307 SUPERFAMILY SSF110849 50 194 2.25E-34 T 11-10-2018 IPR036086 ParB/Sulfiredoxin superfamily DB34_03835 8f1cb9f5d1ae1f8ecf0a9b5bc9df406f 307 SMART SM00470 48 140 1.2E-35 T 11-10-2018 IPR003115 ParB/Sulfiredoxin DB34_03835 8f1cb9f5d1ae1f8ecf0a9b5bc9df406f 307 Gene3D G3DSA:1.10.10.2830 127 238 1.1E-38 T 11-10-2018 DB34_03835 8f1cb9f5d1ae1f8ecf0a9b5bc9df406f 307 Pfam PF02195 ParB-like nuclease domain 50 139 2.3E-27 T 11-10-2018 IPR003115 ParB/Sulfiredoxin DB34_03835 8f1cb9f5d1ae1f8ecf0a9b5bc9df406f 307 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 49 214 6.2E-59 T 11-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 DB34_03835 8f1cb9f5d1ae1f8ecf0a9b5bc9df406f 307 Gene3D G3DSA:3.90.1530.30 61 126 1.8E-27 T 11-10-2018 DB34_09580 6a4be9e37d5cc470e6a5918b02dea381 291 Gene3D G3DSA:3.40.50.150 37 220 1.6E-21 T 11-10-2018 DB34_09580 6a4be9e37d5cc470e6a5918b02dea381 291 Pfam PF08241 Methyltransferase domain 52 136 1.5E-13 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 DB34_09580 6a4be9e37d5cc470e6a5918b02dea381 291 SUPERFAMILY SSF53335 30 206 1.66E-25 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB34_12810 98f56b0e0d8c6c1cca00d7b8198798e9 291 Gene3D G3DSA:3.30.70.1400 14 99 5.6E-24 T 11-10-2018 DB34_12810 98f56b0e0d8c6c1cca00d7b8198798e9 291 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 149 215 5.8E-23 T 11-10-2018 IPR017703 YgfZ/GcvT conserved site DB34_12810 98f56b0e0d8c6c1cca00d7b8198798e9 291 PIRSF PIRSF006487 6 137 7.4E-7 T 11-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 DB34_12810 98f56b0e0d8c6c1cca00d7b8198798e9 291 PIRSF PIRSF006487 149 256 22.0 T 11-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 DB34_12810 98f56b0e0d8c6c1cca00d7b8198798e9 291 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 190 257 3.2E-9 T 11-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 DB34_12810 98f56b0e0d8c6c1cca00d7b8198798e9 291 Gene3D G3DSA:3.30.1360.120 120 270 4.3E-26 T 11-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 DB34_12810 98f56b0e0d8c6c1cca00d7b8198798e9 291 SUPERFAMILY SSF103025 5 204 1.29E-47 T 11-10-2018 DB34_12810 98f56b0e0d8c6c1cca00d7b8198798e9 291 Pfam PF01571 Aminomethyltransferase folate-binding domain 6 100 3.8E-10 T 11-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain DB34_04565 7fe43071afcb0cb121c6a71b8190afc5 675 SUPERFAMILY SSF69322 125 370 5.89E-11 T 11-10-2018 DB34_04565 7fe43071afcb0cb121c6a71b8190afc5 675 Gene3D G3DSA:3.40.50.1820 405 674 5.2E-78 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold DB34_04565 7fe43071afcb0cb121c6a71b8190afc5 675 Pfam PF07676 WD40-like Beta Propeller Repeat 264 287 0.066 T 11-10-2018 IPR011659 WD40-like Beta Propeller DB34_04565 7fe43071afcb0cb121c6a71b8190afc5 675 Pfam PF00326 Prolyl oligopeptidase family 464 670 3.9E-49 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 DB34_04565 7fe43071afcb0cb121c6a71b8190afc5 675 SUPERFAMILY SSF53474 416 669 6.23E-63 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold DB34_04565 7fe43071afcb0cb121c6a71b8190afc5 675 Gene3D G3DSA:2.120.10.30 162 399 1.7E-7 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like DB34_12870 0d4824becc171681a2411c7ae3f6a3ee 439 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 32 374 1.2E-131 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 DB34_12870 0d4824becc171681a2411c7ae3f6a3ee 439 PIRSF PIRSF006809 7 436 9.4E-143 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 DB34_12870 0d4824becc171681a2411c7ae3f6a3ee 439 Pfam PF13167 GTP-binding GTPase N-terminal 35 122 1.3E-24 T 11-10-2018 IPR025121 GTPase HflX, N-terminal DB34_12870 0d4824becc171681a2411c7ae3f6a3ee 439 Pfam PF16360 GTP-binding GTPase Middle Region 125 204 2.6E-29 T 11-10-2018 IPR032305 GTP-binding protein, middle domain DB34_12870 0d4824becc171681a2411c7ae3f6a3ee 439 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 212 232 2.7E-9 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 DB34_12870 0d4824becc171681a2411c7ae3f6a3ee 439 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 279 297 2.7E-9 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 DB34_12870 0d4824becc171681a2411c7ae3f6a3ee 439 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 233 251 2.7E-9 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 DB34_12870 0d4824becc171681a2411c7ae3f6a3ee 439 Gene3D G3DSA:3.40.50.300 209 381 3.0E-38 T 11-10-2018 DB34_12870 0d4824becc171681a2411c7ae3f6a3ee 439 SUPERFAMILY SSF52540 210 383 1.78E-38 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_12870 0d4824becc171681a2411c7ae3f6a3ee 439 Gene3D G3DSA:3.40.50.11060 28 149 1.2E-32 T 11-10-2018 DB34_12870 0d4824becc171681a2411c7ae3f6a3ee 439 Hamap MF_00900 GTPase HflX [hflX]. 38 404 46.561 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 DB34_12870 0d4824becc171681a2411c7ae3f6a3ee 439 Pfam PF01926 50S ribosome-binding GTPase 212 337 1.6E-19 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 DB34_07480 90440f8050d5efaba7709bf97e5b9a9e 262 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 10 256 32.269 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 DB34_07480 90440f8050d5efaba7709bf97e5b9a9e 262 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 12 251 3.5E-52 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 DB34_07480 90440f8050d5efaba7709bf97e5b9a9e 262 Pfam PF01416 tRNA pseudouridine synthase 155 257 5.2E-30 T 11-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 DB34_07480 90440f8050d5efaba7709bf97e5b9a9e 262 PIRSF PIRSF001430 9 261 2.1E-69 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 DB34_07480 90440f8050d5efaba7709bf97e5b9a9e 262 Gene3D G3DSA:3.30.70.660 118 255 5.7E-48 T 11-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 DB34_07480 90440f8050d5efaba7709bf97e5b9a9e 262 SUPERFAMILY SSF55120 9 259 1.58E-79 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DB34_07480 90440f8050d5efaba7709bf97e5b9a9e 262 Gene3D G3DSA:3.30.70.580 7 117 3.6E-26 T 11-10-2018 DB34_10340 562734636a94267e4132f4581b3bfefc 291 Gene3D G3DSA:3.10.310.10 128 283 1.8E-86 T 11-10-2018 DB34_10340 562734636a94267e4132f4581b3bfefc 291 Pfam PF02567 Phenazine biosynthesis-like protein 8 287 5.4E-62 T 11-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 DB34_10340 562734636a94267e4132f4581b3bfefc 291 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 1 290 4.6E-63 T 11-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 DB34_10340 562734636a94267e4132f4581b3bfefc 291 SUPERFAMILY SSF54506 1 289 3.14E-72 T 11-10-2018 DB34_10340 562734636a94267e4132f4581b3bfefc 291 PIRSF PIRSF016184 1 291 3.0E-74 T 11-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 DB34_10340 562734636a94267e4132f4581b3bfefc 291 Gene3D G3DSA:3.10.310.10 7 284 1.8E-86 T 11-10-2018 DB34_09215 2ee842d215b71658484e79edde2e97ca 266 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 215 220 - T 11-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site DB34_09215 2ee842d215b71658484e79edde2e97ca 266 TIGRFAM TIGR00608 radc: DNA repair protein RadC 64 266 1.9E-44 T 11-10-2018 IPR001405 Uncharacterised protein family UPF0758 DB34_09215 2ee842d215b71658484e79edde2e97ca 266 SUPERFAMILY SSF102712 186 234 6.67E-5 T 11-10-2018 DB34_09215 2ee842d215b71658484e79edde2e97ca 266 Pfam PF04002 RadC-like JAB domain 147 264 2.3E-39 T 11-10-2018 IPR025657 RadC-like JAB domain DB34_09215 2ee842d215b71658484e79edde2e97ca 266 Gene3D G3DSA:3.40.140.10 144 266 6.3E-39 T 11-10-2018 DB34_12740 284e1838816e938eefae28ebfbe583f0 328 SUPERFAMILY SSF55120 84 312 3.36E-60 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DB34_12740 284e1838816e938eefae28ebfbe583f0 328 Gene3D G3DSA:3.30.2350.10 82 301 4.0E-64 T 11-10-2018 DB34_12740 284e1838816e938eefae28ebfbe583f0 328 Pfam PF00849 RNA pseudouridylate synthase 98 251 3.2E-34 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 DB34_12740 284e1838816e938eefae28ebfbe583f0 328 Gene3D G3DSA:3.10.290.10 3 66 2.4E-14 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DB34_12740 284e1838816e938eefae28ebfbe583f0 328 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 11 311 3.4E-64 T 11-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 DB34_12740 284e1838816e938eefae28ebfbe583f0 328 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 138 152 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 DB34_12740 284e1838816e938eefae28ebfbe583f0 328 SMART SM00363 15 85 9.4E-4 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_12740 284e1838816e938eefae28ebfbe583f0 328 SUPERFAMILY SSF55174 14 64 4.32E-8 T 11-10-2018 DB34_02155 9a8c62563f80e3d82c6b4d3aad35650c 384 Gene3D G3DSA:3.80.30.20 1 303 1.6E-94 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe DB34_02155 9a8c62563f80e3d82c6b4d3aad35650c 384 Pfam PF06969 HemN C-terminal domain 309 373 3.4E-13 T 11-10-2018 IPR010723 HemN, C-terminal DB34_02155 9a8c62563f80e3d82c6b4d3aad35650c 384 Pfam PF04055 Radical SAM superfamily 10 174 5.4E-18 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DB34_02155 9a8c62563f80e3d82c6b4d3aad35650c 384 SMART SM00729 5 224 1.9E-50 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DB34_02155 9a8c62563f80e3d82c6b4d3aad35650c 384 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 7 370 6.7E-95 T 11-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 DB34_02155 9a8c62563f80e3d82c6b4d3aad35650c 384 SUPERFAMILY SSF102114 4 382 6.28E-105 T 11-10-2018 DB34_09555 07df15fce394067e36854aaeb7369431 233 Pfam PF03099 Biotin/lipoate A/B protein ligase family 73 172 1.5E-7 T 11-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 DB34_09555 07df15fce394067e36854aaeb7369431 233 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 78 125 1.0E-10 T 11-10-2018 DB34_09555 07df15fce394067e36854aaeb7369431 233 PIRSF PIRSF016262 1 230 2.8E-53 T 11-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 DB34_09555 07df15fce394067e36854aaeb7369431 233 Hamap MF_00013 Octanoyltransferase [lipB]. 4 219 33.459 T 11-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 DB34_09555 07df15fce394067e36854aaeb7369431 233 SUPERFAMILY SSF55681 11 218 6.63E-60 T 11-10-2018 DB34_09555 07df15fce394067e36854aaeb7369431 233 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 73 88 - T 11-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 DB34_09555 07df15fce394067e36854aaeb7369431 233 Gene3D G3DSA:3.30.930.10 4 216 6.3E-61 T 11-10-2018 DB34_09555 07df15fce394067e36854aaeb7369431 233 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 32 210 3.6E-41 T 11-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 DB34_08155 50f731d9a36603d2f4cfeaec181edda9 394 SUPERFAMILY SSF81648 276 391 2.83E-22 T 11-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 DB34_08155 50f731d9a36603d2f4cfeaec181edda9 394 Pfam PF00033 Cytochrome b/b6/petB 33 217 7.2E-51 T 11-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 DB34_08155 50f731d9a36603d2f4cfeaec181edda9 394 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 273 376 6.9E-26 T 11-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 DB34_08155 50f731d9a36603d2f4cfeaec181edda9 394 SUPERFAMILY SSF81342 26 275 4.71E-77 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 DB34_08155 50f731d9a36603d2f4cfeaec181edda9 394 Gene3D G3DSA:1.20.810.10 7 393 8.3E-119 T 11-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 DB34_10235 c4f2c251cd08d0807effec648a976bfb 158 Pfam PF03477 ATP cone domain 50 135 1.6E-18 T 11-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 DB34_10235 c4f2c251cd08d0807effec648a976bfb 158 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 144 2.5E-50 T 11-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 DB34_10235 c4f2c251cd08d0807effec648a976bfb 158 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 154 82.683 T 11-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 DB34_08920 8151d5ef104302143c4a3a5767766f7d 466 SUPERFAMILY SSF52317 240 459 9.63E-61 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like DB34_08920 8151d5ef104302143c4a3a5767766f7d 466 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 88 459 1.3E-138 T 11-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DB34_08920 8151d5ef104302143c4a3a5767766f7d 466 PRINTS PR00097 Anthranilate synthase component II signature 434 447 1.9E-6 T 11-10-2018 DB34_08920 8151d5ef104302143c4a3a5767766f7d 466 PRINTS PR00097 Anthranilate synthase component II signature 349 360 1.9E-6 T 11-10-2018 DB34_08920 8151d5ef104302143c4a3a5767766f7d 466 PRINTS PR00097 Anthranilate synthase component II signature 320 329 1.9E-6 T 11-10-2018 DB34_08920 8151d5ef104302143c4a3a5767766f7d 466 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 86 463 47.398 T 11-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DB34_08920 8151d5ef104302143c4a3a5767766f7d 466 Pfam PF00117 Glutamine amidotransferase class-I 281 456 2.0E-46 T 11-10-2018 IPR017926 Glutamine amidotransferase DB34_08920 8151d5ef104302143c4a3a5767766f7d 466 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 317 331 4.4E-38 T 11-10-2018 DB34_08920 8151d5ef104302143c4a3a5767766f7d 466 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 278 292 4.4E-38 T 11-10-2018 DB34_08920 8151d5ef104302143c4a3a5767766f7d 466 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 391 402 4.4E-38 T 11-10-2018 DB34_08920 8151d5ef104302143c4a3a5767766f7d 466 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 349 365 4.4E-38 T 11-10-2018 DB34_08920 8151d5ef104302143c4a3a5767766f7d 466 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 366 383 4.4E-38 T 11-10-2018 DB34_08920 8151d5ef104302143c4a3a5767766f7d 466 SMART SM01097 86 218 2.1E-78 T 11-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DB34_08920 8151d5ef104302143c4a3a5767766f7d 466 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 88 216 1.8E-48 T 11-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DB34_08920 8151d5ef104302143c4a3a5767766f7d 466 Gene3D G3DSA:3.50.30.20 86 236 2.5E-52 T 11-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DB34_08920 8151d5ef104302143c4a3a5767766f7d 466 Gene3D G3DSA:1.10.260.40 4 74 2.7E-7 T 11-10-2018 DB34_08920 8151d5ef104302143c4a3a5767766f7d 466 Gene3D G3DSA:3.40.50.880 239 461 2.0E-73 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like DB34_08920 8151d5ef104302143c4a3a5767766f7d 466 SUPERFAMILY SSF52021 87 232 9.55E-51 T 11-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DB34_08920 8151d5ef104302143c4a3a5767766f7d 466 PRINTS PR00096 Glutamine amidotransferase superfamily signature 320 329 3.9E-12 T 11-10-2018 DB34_08920 8151d5ef104302143c4a3a5767766f7d 466 PRINTS PR00096 Glutamine amidotransferase superfamily signature 349 360 3.9E-12 T 11-10-2018 DB34_08920 8151d5ef104302143c4a3a5767766f7d 466 PRINTS PR00096 Glutamine amidotransferase superfamily signature 434 447 3.9E-12 T 11-10-2018 DB34_05420 29afb785fdfb230d298a3313aed6a265 414 PIRSF PIRSF001413 14 414 1.3E-164 T 11-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DB34_05420 29afb785fdfb230d298a3313aed6a265 414 Gene3D G3DSA:3.40.50.1100 29 225 5.9E-188 T 11-10-2018 DB34_05420 29afb785fdfb230d298a3313aed6a265 414 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 26 409 2.6E-194 T 11-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DB34_05420 29afb785fdfb230d298a3313aed6a265 414 Gene3D G3DSA:3.40.50.1100 73 403 5.9E-188 T 11-10-2018 DB34_05420 29afb785fdfb230d298a3313aed6a265 414 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 100 114 - T 11-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DB34_05420 29afb785fdfb230d298a3313aed6a265 414 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 72 397 1.1E-50 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme DB34_05420 29afb785fdfb230d298a3313aed6a265 414 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 20 410 53.038 T 11-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DB34_05420 29afb785fdfb230d298a3313aed6a265 414 SUPERFAMILY SSF53686 23 409 1.44E-148 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DB34_02255 5ab366a9902dbbfd1eb3cff0fa973f22 161 Hamap MF_00822 Urease accessory protein UreE [ureE]. 2 142 20.442 T 11-10-2018 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 DB34_02255 5ab366a9902dbbfd1eb3cff0fa973f22 161 Gene3D G3DSA:2.60.260.20 1 72 1.8E-11 T 11-10-2018 DB34_02255 5ab366a9902dbbfd1eb3cff0fa973f22 161 Gene3D G3DSA:3.30.70.790 75 145 1.6E-26 T 11-10-2018 IPR036675 UreE, C-terminal domain superfamily GO:0016151|GO:0019627|GO:0065003 DB34_02255 5ab366a9902dbbfd1eb3cff0fa973f22 161 SMART SM00988 4 68 4.6E-11 T 11-10-2018 IPR004029 UreE urease accessory, N-terminal DB34_02255 5ab366a9902dbbfd1eb3cff0fa973f22 161 SUPERFAMILY SSF69737 74 141 1.09E-20 T 11-10-2018 IPR036675 UreE, C-terminal domain superfamily GO:0016151|GO:0019627|GO:0065003 DB34_02255 5ab366a9902dbbfd1eb3cff0fa973f22 161 SUPERFAMILY SSF69287 1 71 1.83E-10 T 11-10-2018 IPR036118 UreE urease accessory, N-terminal domain superfamily DB34_02255 5ab366a9902dbbfd1eb3cff0fa973f22 161 PIRSF PIRSF036402 1 161 4.4E-34 T 11-10-2018 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 DB34_02255 5ab366a9902dbbfd1eb3cff0fa973f22 161 Pfam PF05194 UreE urease accessory protein, C-terminal domain 75 160 1.2E-25 T 11-10-2018 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0016151|GO:0019627|GO:0065003 DB34_02255 5ab366a9902dbbfd1eb3cff0fa973f22 161 Pfam PF02814 UreE urease accessory protein, N-terminal domain 25 68 1.5E-10 T 11-10-2018 IPR004029 UreE urease accessory, N-terminal DB34_04155 5d59c33a06950fc2fe05ed8ff0813ec1 340 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 118 3.8E-31 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 DB34_04155 5d59c33a06950fc2fe05ed8ff0813ec1 340 Gene3D G3DSA:3.40.50.720 5 328 1.0E-140 T 11-10-2018 DB34_04155 5d59c33a06950fc2fe05ed8ff0813ec1 340 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 138 317 6.2E-56 T 11-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DB34_04155 5d59c33a06950fc2fe05ed8ff0813ec1 340 PIRSF PIRSF000148 2 336 8.4E-129 T 11-10-2018 DB34_04155 5d59c33a06950fc2fe05ed8ff0813ec1 340 SUPERFAMILY SSF51735 3 156 1.49E-52 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily DB34_04155 5d59c33a06950fc2fe05ed8ff0813ec1 340 SMART SM00859 4 119 1.8E-47 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 DB34_04155 5d59c33a06950fc2fe05ed8ff0813ec1 340 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 2 331 35.591 T 11-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DB34_04155 5d59c33a06950fc2fe05ed8ff0813ec1 340 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 4 332 4.8E-139 T 11-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DB34_04155 5d59c33a06950fc2fe05ed8ff0813ec1 340 SUPERFAMILY SSF55347 128 318 1.77E-74 T 11-10-2018 DB34_04155 5d59c33a06950fc2fe05ed8ff0813ec1 340 Gene3D G3DSA:3.30.360.10 127 314 1.0E-140 T 11-10-2018 DB34_13395 09ccb9a362ce84647ada12140c2188f9 399 Gene3D G3DSA:1.10.443.10 208 385 5.5E-15 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 DB34_13395 09ccb9a362ce84647ada12140c2188f9 399 Gene3D G3DSA:3.30.160.390 1 86 4.2E-30 T 11-10-2018 IPR038488 Integrase, DNA-binding domain superfamily DB34_13395 09ccb9a362ce84647ada12140c2188f9 399 Gene3D G3DSA:1.10.150.130 91 203 1.0E-29 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal DB34_13395 09ccb9a362ce84647ada12140c2188f9 399 Pfam PF00589 Phage integrase family 210 373 1.2E-15 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 DB34_13395 09ccb9a362ce84647ada12140c2188f9 399 Pfam PF13356 Arm DNA-binding domain 2 83 8.0E-18 T 11-10-2018 IPR025166 Integrase, DNA-binding domain DB34_13395 09ccb9a362ce84647ada12140c2188f9 399 SUPERFAMILY SSF56349 98 381 2.94E-55 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DB34_10260 847f936405ae85aef43dd6e40c144d9a 256 SUPERFAMILY SSF100950 75 235 4.13E-27 T 11-10-2018 IPR037171 NagB/RpiA transferase-like DB34_10260 847f936405ae85aef43dd6e40c144d9a 256 ProSitePatterns PS00894 DeoR-type HTH domain signature. 8 42 - T 11-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 DB34_10260 847f936405ae85aef43dd6e40c144d9a 256 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 26 40 4.8E-10 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DB34_10260 847f936405ae85aef43dd6e40c144d9a 256 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 40 58 4.8E-10 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DB34_10260 847f936405ae85aef43dd6e40c144d9a 256 SUPERFAMILY SSF46785 6 79 1.48E-13 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB34_10260 847f936405ae85aef43dd6e40c144d9a 256 Pfam PF08220 DeoR-like helix-turn-helix domain 8 62 2.4E-17 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DB34_10260 847f936405ae85aef43dd6e40c144d9a 256 Gene3D G3DSA:3.30.750.70 75 163 1.6E-5 T 11-10-2018 DB34_10260 847f936405ae85aef43dd6e40c144d9a 256 Gene3D G3DSA:1.10.10.10 1 57 2.4E-8 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB34_10260 847f936405ae85aef43dd6e40c144d9a 256 SMART SM01134 74 235 1.9E-65 T 11-10-2018 DB34_10260 847f936405ae85aef43dd6e40c144d9a 256 SMART SM00420 8 60 1.6E-15 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DB34_10260 847f936405ae85aef43dd6e40c144d9a 256 Pfam PF00455 DeoR C terminal sensor domain 76 234 8.6E-49 T 11-10-2018 IPR014036 DeoR C-terminal sensor domain DB34_01580 90d4a017b9cbc1f330c7136b70d9c7c8 214 Pfam PF08362 YcdC-like protein, C-terminal region 72 210 1.3E-39 T 11-10-2018 IPR013573 Transcription regulator YcdC, C-terminal GO:0045892 DB34_01580 90d4a017b9cbc1f330c7136b70d9c7c8 214 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 68 9.3E-12 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB34_01580 90d4a017b9cbc1f330c7136b70d9c7c8 214 Gene3D G3DSA:1.10.357.10 71 211 7.8E-45 T 11-10-2018 DB34_01580 90d4a017b9cbc1f330c7136b70d9c7c8 214 Gene3D G3DSA:1.10.10.60 3 68 2.4E-17 T 11-10-2018 DB34_01580 90d4a017b9cbc1f330c7136b70d9c7c8 214 SUPERFAMILY SSF46689 13 93 4.05E-16 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB34_01580 90d4a017b9cbc1f330c7136b70d9c7c8 214 SUPERFAMILY SSF48498 88 210 5.66E-34 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DB34_01580 90d4a017b9cbc1f330c7136b70d9c7c8 214 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 1.2E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB34_01580 90d4a017b9cbc1f330c7136b70d9c7c8 214 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 1.2E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB34_07325 8d3da44149c426229c8c2cc917d998ba 228 Pfam PF00484 Carbonic anhydrase 44 203 2.0E-47 T 11-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 DB34_07325 8d3da44149c426229c8c2cc917d998ba 228 SMART SM00947 37 207 3.6E-64 T 11-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 DB34_07325 8d3da44149c426229c8c2cc917d998ba 228 Gene3D G3DSA:3.40.1050.10 2 215 2.8E-68 T 11-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 DB34_07325 8d3da44149c426229c8c2cc917d998ba 228 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 92 112 - T 11-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 DB34_07325 8d3da44149c426229c8c2cc917d998ba 228 SUPERFAMILY SSF53056 10 220 5.76E-61 T 11-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 DB34_07325 8d3da44149c426229c8c2cc917d998ba 228 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 49 56 - T 11-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 DB34_06225 fd32d6cc5d9abd1e680a77b119cb776c 365 Pfam PF08241 Methyltransferase domain 156 203 4.9E-13 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 DB34_06225 fd32d6cc5d9abd1e680a77b119cb776c 365 SUPERFAMILY SSF53335 125 255 4.56E-16 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB34_06225 fd32d6cc5d9abd1e680a77b119cb776c 365 Gene3D G3DSA:3.40.50.150 116 278 5.7E-16 T 11-10-2018 DB34_04615 eb873e22a1dfbd3c31249de3bda6afd7 296 Gene3D G3DSA:3.40.1380.10 61 215 8.1E-87 T 11-10-2018 DB34_04615 eb873e22a1dfbd3c31249de3bda6afd7 296 SUPERFAMILY SSF52943 2 296 1.83E-84 T 11-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB34_04615 eb873e22a1dfbd3c31249de3bda6afd7 296 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 282 295 - T 11-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB34_04615 eb873e22a1dfbd3c31249de3bda6afd7 296 Gene3D G3DSA:1.10.287.80 6 292 8.1E-87 T 11-10-2018 DB34_04615 eb873e22a1dfbd3c31249de3bda6afd7 296 PIRSF PIRSF039089 1 296 1.3E-91 T 11-10-2018 DB34_04615 eb873e22a1dfbd3c31249de3bda6afd7 296 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 296 7.7E-95 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB34_04615 eb873e22a1dfbd3c31249de3bda6afd7 296 Pfam PF00231 ATP synthase 3 295 2.8E-90 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB34_04615 eb873e22a1dfbd3c31249de3bda6afd7 296 PRINTS PR00126 ATP synthase gamma subunit signature 171 188 1.2E-31 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB34_04615 eb873e22a1dfbd3c31249de3bda6afd7 296 PRINTS PR00126 ATP synthase gamma subunit signature 76 95 1.2E-31 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB34_04615 eb873e22a1dfbd3c31249de3bda6afd7 296 PRINTS PR00126 ATP synthase gamma subunit signature 274 295 1.2E-31 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB34_04615 eb873e22a1dfbd3c31249de3bda6afd7 296 PRINTS PR00126 ATP synthase gamma subunit signature 243 262 1.2E-31 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB34_04615 eb873e22a1dfbd3c31249de3bda6afd7 296 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 296 32.34 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB34_09705 b9244cdc9730cc12c88674436f4a35a6 214 Hamap MF_00165 Thymidylate kinase [tmk]. 5 209 25.925 T 11-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 DB34_09705 b9244cdc9730cc12c88674436f4a35a6 214 Pfam PF02223 Thymidylate kinase 9 201 7.4E-41 T 11-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 DB34_09705 b9244cdc9730cc12c88674436f4a35a6 214 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 1 201 3.2E-42 T 11-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 DB34_09705 b9244cdc9730cc12c88674436f4a35a6 214 ProSitePatterns PS01331 Thymidylate kinase signature. 93 105 - T 11-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 DB34_09705 b9244cdc9730cc12c88674436f4a35a6 214 SUPERFAMILY SSF52540 3 209 1.33E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_09705 b9244cdc9730cc12c88674436f4a35a6 214 Gene3D G3DSA:3.40.50.300 2 211 1.9E-57 T 11-10-2018 DB34_08915 fc0e68fa52b83780f2fb57306d86a061 1084 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 8.6E-63 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DB34_08915 fc0e68fa52b83780f2fb57306d86a061 1084 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 379 397 8.6E-63 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DB34_08915 fc0e68fa52b83780f2fb57306d86a061 1084 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 8.6E-63 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DB34_08915 fc0e68fa52b83780f2fb57306d86a061 1084 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 8.6E-63 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DB34_08915 fc0e68fa52b83780f2fb57306d86a061 1084 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 8.6E-63 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DB34_08915 fc0e68fa52b83780f2fb57306d86a061 1084 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 8.6E-63 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DB34_08915 fc0e68fa52b83780f2fb57306d86a061 1084 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 8.6E-63 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DB34_08915 fc0e68fa52b83780f2fb57306d86a061 1084 Gene3D G3DSA:1.10.1030.10 404 548 7.8E-42 T 11-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DB34_08915 fc0e68fa52b83780f2fb57306d86a061 1084 SUPERFAMILY SSF52335 945 1081 2.49E-40 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily DB34_08915 fc0e68fa52b83780f2fb57306d86a061 1084 Gene3D G3DSA:3.30.470.20 671 945 7.6E-110 T 11-10-2018 DB34_08915 fc0e68fa52b83780f2fb57306d86a061 1084 Gene3D G3DSA:3.30.470.20 119 402 8.2E-126 T 11-10-2018 DB34_08915 fc0e68fa52b83780f2fb57306d86a061 1084 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 848 855 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DB34_08915 fc0e68fa52b83780f2fb57306d86a061 1084 Gene3D G3DSA:3.40.50.1380 946 1082 8.6E-38 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily DB34_08915 fc0e68fa52b83780f2fb57306d86a061 1084 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1062 0.0 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DB34_08915 fc0e68fa52b83780f2fb57306d86a061 1084 SUPERFAMILY SSF56059 128 400 1.77E-106 T 11-10-2018 DB34_08915 fc0e68fa52b83780f2fb57306d86a061 1084 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1071 12.971 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DB34_08915 fc0e68fa52b83780f2fb57306d86a061 1084 Gene3D G3DSA:3.40.50.20 556 668 5.8E-45 T 11-10-2018 DB34_08915 fc0e68fa52b83780f2fb57306d86a061 1084 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1079 13.359 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DB34_08915 fc0e68fa52b83780f2fb57306d86a061 1084 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DB34_08915 fc0e68fa52b83780f2fb57306d86a061 1084 SMART SM00851 965 1051 4.9E-30 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain DB34_08915 fc0e68fa52b83780f2fb57306d86a061 1084 SUPERFAMILY SSF48108 395 547 6.8E-46 T 11-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DB34_08915 fc0e68fa52b83780f2fb57306d86a061 1084 Gene3D G3DSA:3.40.50.20 1 116 7.2E-49 T 11-10-2018 DB34_08915 fc0e68fa52b83780f2fb57306d86a061 1084 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 715 729 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DB34_08915 fc0e68fa52b83780f2fb57306d86a061 1084 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 8.8E-70 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DB34_08915 fc0e68fa52b83780f2fb57306d86a061 1084 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 679 884 1.4E-35 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DB34_08915 fc0e68fa52b83780f2fb57306d86a061 1084 SUPERFAMILY SSF56059 679 943 8.31E-97 T 11-10-2018 DB34_08915 fc0e68fa52b83780f2fb57306d86a061 1084 SMART SM01096 422 544 1.6E-62 T 11-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DB34_08915 fc0e68fa52b83780f2fb57306d86a061 1084 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 425 544 1.5E-40 T 11-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DB34_08915 fc0e68fa52b83780f2fb57306d86a061 1084 Pfam PF02142 MGS-like domain 969 1051 1.1E-17 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain DB34_08915 fc0e68fa52b83780f2fb57306d86a061 1084 SUPERFAMILY SSF52440 558 681 2.16E-44 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily DB34_08915 fc0e68fa52b83780f2fb57306d86a061 1084 SUPERFAMILY SSF52440 1 127 9.21E-49 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily DB34_07540 83b0d0203d9e28f6563522c018045f11 217 Gene3D G3DSA:3.30.420.10 14 200 6.0E-48 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DB34_07540 83b0d0203d9e28f6563522c018045f11 217 SUPERFAMILY SSF53098 25 203 2.09E-54 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily DB34_07540 83b0d0203d9e28f6563522c018045f11 217 Pfam PF01612 3'-5' exonuclease 26 180 1.5E-36 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 DB34_07540 83b0d0203d9e28f6563522c018045f11 217 SMART SM00474 8 181 6.6E-41 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 DB34_07590 07da1057cb754f9a40c4b68921e6bc76 258 Pfam PF00005 ABC transporter 23 172 2.0E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB34_07590 07da1057cb754f9a40c4b68921e6bc76 258 SUPERFAMILY SSF52540 8 236 5.8E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_07590 07da1057cb754f9a40c4b68921e6bc76 258 Gene3D G3DSA:3.40.50.300 7 253 6.7E-68 T 11-10-2018 DB34_07590 07da1057cb754f9a40c4b68921e6bc76 258 SMART SM00382 32 230 1.3E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_07590 07da1057cb754f9a40c4b68921e6bc76 258 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB34_05325 fd1d507a7183bdafc91ce991069fe2b3 259 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 140 157 - T 11-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DB34_05325 fd1d507a7183bdafc91ce991069fe2b3 259 Gene3D G3DSA:3.30.360.10 116 224 4.7E-88 T 11-10-2018 DB34_05325 fd1d507a7183bdafc91ce991069fe2b3 259 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 117 254 5.7E-44 T 11-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DB34_05325 fd1d507a7183bdafc91ce991069fe2b3 259 SUPERFAMILY SSF55347 117 226 2.4E-33 T 11-10-2018 DB34_05325 fd1d507a7183bdafc91ce991069fe2b3 259 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 1 255 31.069 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DB34_05325 fd1d507a7183bdafc91ce991069fe2b3 259 PIRSF PIRSF000161 1 257 8.8E-82 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DB34_05325 fd1d507a7183bdafc91ce991069fe2b3 259 Gene3D G3DSA:3.40.50.720 3 254 4.7E-88 T 11-10-2018 DB34_05325 fd1d507a7183bdafc91ce991069fe2b3 259 SUPERFAMILY SSF51735 1 256 5.16E-37 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily DB34_05325 fd1d507a7183bdafc91ce991069fe2b3 259 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 1 114 8.1E-26 T 11-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DB34_05325 fd1d507a7183bdafc91ce991069fe2b3 259 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 1 255 2.9E-68 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DB34_03810 b56c6a3963be4e4ed64370cc17d54a3d 394 Pfam PF01494 FAD binding domain 5 338 7.1E-20 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 DB34_03810 b56c6a3963be4e4ed64370cc17d54a3d 394 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 6 388 1.7E-110 T 11-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 DB34_03810 b56c6a3963be4e4ed64370cc17d54a3d 394 SUPERFAMILY SSF51905 5 381 4.71E-52 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_03810 b56c6a3963be4e4ed64370cc17d54a3d 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 155 170 2.1E-15 T 11-10-2018 DB34_03810 b56c6a3963be4e4ed64370cc17d54a3d 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 2.1E-15 T 11-10-2018 DB34_03810 b56c6a3963be4e4ed64370cc17d54a3d 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 279 294 2.1E-15 T 11-10-2018 DB34_03810 b56c6a3963be4e4ed64370cc17d54a3d 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 294 310 2.1E-15 T 11-10-2018 DB34_03810 b56c6a3963be4e4ed64370cc17d54a3d 394 Gene3D G3DSA:3.50.50.60 6 336 3.1E-87 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_03810 b56c6a3963be4e4ed64370cc17d54a3d 394 Gene3D G3DSA:3.30.9.50 80 268 3.1E-87 T 11-10-2018 DB34_12860 7ed60b831335db70ec91f8b24b2460f7 871 SMART SM01086 770 859 1.8E-36 T 11-10-2018 IPR019489 Clp ATPase, C-terminal DB34_12860 7ed60b831335db70ec91f8b24b2460f7 871 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 7.3E-14 T 11-10-2018 IPR004176 Clp, N-terminal DB34_12860 7ed60b831335db70ec91f8b24b2460f7 871 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 95 145 3.5E-8 T 11-10-2018 IPR004176 Clp, N-terminal DB34_12860 7ed60b831335db70ec91f8b24b2460f7 871 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 679 697 1.1E-41 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 DB34_12860 7ed60b831335db70ec91f8b24b2460f7 871 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 605 623 1.1E-41 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 DB34_12860 7ed60b831335db70ec91f8b24b2460f7 871 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 650 668 1.1E-41 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 DB34_12860 7ed60b831335db70ec91f8b24b2460f7 871 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 712 726 1.1E-41 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 DB34_12860 7ed60b831335db70ec91f8b24b2460f7 871 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 858 0.0 T 11-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 DB34_12860 7ed60b831335db70ec91f8b24b2460f7 871 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 204 320 1.0E-13 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DB34_12860 7ed60b831335db70ec91f8b24b2460f7 871 Gene3D G3DSA:1.10.8.60 770 870 1.6E-28 T 11-10-2018 DB34_12860 7ed60b831335db70ec91f8b24b2460f7 871 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 635 653 - T 11-10-2018 IPR028299 ClpA/B, conserved site 2 DB34_12860 7ed60b831335db70ec91f8b24b2460f7 871 SUPERFAMILY SSF81923 5 156 3.66E-39 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 DB34_12860 7ed60b831335db70ec91f8b24b2460f7 871 Gene3D G3DSA:1.10.1780.10 1 151 1.8E-32 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 DB34_12860 7ed60b831335db70ec91f8b24b2460f7 871 SUPERFAMILY SSF52540 550 853 1.48E-81 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_12860 7ed60b831335db70ec91f8b24b2460f7 871 Gene3D G3DSA:3.40.50.300 158 348 1.1E-72 T 11-10-2018 DB34_12860 7ed60b831335db70ec91f8b24b2460f7 871 SMART SM00382 199 344 1.1E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_12860 7ed60b831335db70ec91f8b24b2460f7 871 SMART SM00382 601 771 7.9E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_12860 7ed60b831335db70ec91f8b24b2460f7 871 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 295 307 - T 11-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 DB34_12860 7ed60b831335db70ec91f8b24b2460f7 871 Gene3D G3DSA:3.40.50.300 554 768 3.7E-87 T 11-10-2018 DB34_12860 7ed60b831335db70ec91f8b24b2460f7 871 SUPERFAMILY SSF52540 159 549 6.37E-101 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_12860 7ed60b831335db70ec91f8b24b2460f7 871 Pfam PF07724 AAA domain (Cdc48 subfamily) 600 764 9.6E-56 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DB34_12860 7ed60b831335db70ec91f8b24b2460f7 871 Gene3D G3DSA:3.40.50.300 349 548 2.0E-74 T 11-10-2018 DB34_12860 7ed60b831335db70ec91f8b24b2460f7 871 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 770 850 3.0E-26 T 11-10-2018 IPR019489 Clp ATPase, C-terminal DB34_09430 dd78d36a64233219d45214e6eeb7f229 427 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 246 283 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DB34_09430 dd78d36a64233219d45214e6eeb7f229 427 PIRSF PIRSF000521 43 427 3.2E-26 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DB34_09430 dd78d36a64233219d45214e6eeb7f229 427 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 23 426 8.7E-165 T 11-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 DB34_09430 dd78d36a64233219d45214e6eeb7f229 427 SUPERFAMILY SSF53383 15 426 4.41E-118 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB34_09430 dd78d36a64233219d45214e6eeb7f229 427 Gene3D G3DSA:3.90.1150.10 22 418 9.1E-151 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB34_09430 dd78d36a64233219d45214e6eeb7f229 427 Gene3D G3DSA:3.40.640.10 71 335 9.1E-151 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB34_09430 dd78d36a64233219d45214e6eeb7f229 427 Pfam PF00202 Aminotransferase class-III 28 426 6.1E-119 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DB34_08610 3ce0814b9b40cf2e758d0da07ac12bde 1391 Gene3D G3DSA:1.10.40.90 375 417 1.6E-22 T 11-10-2018 DB34_08610 3ce0814b9b40cf2e758d0da07ac12bde 1391 Pfam PF05000 RNA polymerase Rpb1, domain 4 689 761 1.2E-15 T 11-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB34_08610 3ce0814b9b40cf2e758d0da07ac12bde 1391 Gene3D G3DSA:1.10.1790.20 1140 1319 3.5E-69 T 11-10-2018 DB34_08610 3ce0814b9b40cf2e758d0da07ac12bde 1391 Gene3D G3DSA:1.10.132.30 657 797 3.0E-61 T 11-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB34_08610 3ce0814b9b40cf2e758d0da07ac12bde 1391 Gene3D G3DSA:2.40.50.100 955 1029 1.7E-22 T 11-10-2018 DB34_08610 3ce0814b9b40cf2e758d0da07ac12bde 1391 Pfam PF04998 RNA polymerase Rpb1, domain 5 773 1321 8.0E-73 T 11-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB34_08610 3ce0814b9b40cf2e758d0da07ac12bde 1391 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 10 1382 18.921 T 11-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB34_08610 3ce0814b9b40cf2e758d0da07ac12bde 1391 Pfam PF00623 RNA polymerase Rpb1, domain 2 345 382 1.5E-7 T 11-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB34_08610 3ce0814b9b40cf2e758d0da07ac12bde 1391 Pfam PF00623 RNA polymerase Rpb1, domain 2 389 486 1.8E-27 T 11-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB34_08610 3ce0814b9b40cf2e758d0da07ac12bde 1391 Gene3D G3DSA:1.10.150.390 1321 1383 2.5E-27 T 11-10-2018 DB34_08610 3ce0814b9b40cf2e758d0da07ac12bde 1391 Gene3D G3DSA:1.10.274.100 491 656 2.0E-31 T 11-10-2018 DB34_08610 3ce0814b9b40cf2e758d0da07ac12bde 1391 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1369 0.0 T 11-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB34_08610 3ce0814b9b40cf2e758d0da07ac12bde 1391 Gene3D G3DSA:2.40.50.100 1156 1220 3.5E-69 T 11-10-2018 DB34_08610 3ce0814b9b40cf2e758d0da07ac12bde 1391 Gene3D G3DSA:2.40.50.100 1030 1131 1.8E-25 T 11-10-2018 DB34_08610 3ce0814b9b40cf2e758d0da07ac12bde 1391 SMART SM00663 236 515 2.0E-185 T 11-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB34_08610 3ce0814b9b40cf2e758d0da07ac12bde 1391 Pfam PF04997 RNA polymerase Rpb1, domain 1 16 343 8.1E-91 T 11-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB34_08610 3ce0814b9b40cf2e758d0da07ac12bde 1391 SUPERFAMILY SSF64484 16 1368 0.0 T 11-10-2018 DB34_08610 3ce0814b9b40cf2e758d0da07ac12bde 1391 Pfam PF04983 RNA polymerase Rpb1, domain 3 490 660 8.1E-25 T 11-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB34_06990 cb0b784c58963443f09af9e5b3299b6e 146 Pfam PF03061 Thioesterase superfamily 29 99 1.2E-14 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 DB34_06990 cb0b784c58963443f09af9e5b3299b6e 146 Gene3D G3DSA:3.10.129.10 3 139 5.3E-33 T 11-10-2018 DB34_06990 cb0b784c58963443f09af9e5b3299b6e 146 SUPERFAMILY SSF54637 12 135 4.09E-34 T 11-10-2018 IPR029069 HotDog domain superfamily DB34_00615 4e067dab304c0438cc5c9752204f1d31 301 SUPERFAMILY SSF46934 4 55 1.09E-19 T 11-10-2018 IPR009060 UBA-like superfamily GO:0005515 DB34_00615 4e067dab304c0438cc5c9752204f1d31 301 Gene3D G3DSA:3.30.479.20 58 160 5.8E-24 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 DB34_00615 4e067dab304c0438cc5c9752204f1d31 301 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 298 6.7E-95 T 11-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DB34_00615 4e067dab304c0438cc5c9752204f1d31 301 Gene3D G3DSA:1.10.286.20 207 244 1.2E-16 T 11-10-2018 DB34_00615 4e067dab304c0438cc5c9752204f1d31 301 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 11-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DB34_00615 4e067dab304c0438cc5c9752204f1d31 301 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 11-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DB34_00615 4e067dab304c0438cc5c9752204f1d31 301 SUPERFAMILY SSF54713 56 145 1.77E-20 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 DB34_00615 4e067dab304c0438cc5c9752204f1d31 301 Hamap MF_00050 Elongation factor Ts [tsf]. 1 299 76.557 T 11-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DB34_00615 4e067dab304c0438cc5c9752204f1d31 301 SUPERFAMILY SSF54713 149 299 8.76E-45 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 DB34_00615 4e067dab304c0438cc5c9752204f1d31 301 Pfam PF00889 Elongation factor TS 71 282 4.1E-66 T 11-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 DB34_00615 4e067dab304c0438cc5c9752204f1d31 301 Gene3D G3DSA:1.10.8.10 1 56 3.9E-28 T 11-10-2018 DB34_04975 7453f97c296235479a4431338b7a512f 360 Pfam PF02547 Queuosine biosynthesis protein 7 345 2.2E-120 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 DB34_04975 7453f97c296235479a4431338b7a512f 360 Gene3D G3DSA:3.40.1780.10 17 344 5.7E-106 T 11-10-2018 DB34_04975 7453f97c296235479a4431338b7a512f 360 Gene3D G3DSA:2.40.10.240 66 167 5.7E-106 T 11-10-2018 DB34_04975 7453f97c296235479a4431338b7a512f 360 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 346 41.417 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 DB34_04975 7453f97c296235479a4431338b7a512f 360 SUPERFAMILY SSF111337 5 345 2.49E-118 T 11-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 DB34_04975 7453f97c296235479a4431338b7a512f 360 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 5 345 1.0E-103 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 DB34_03795 0fb820eb5fbaf8b05c871c826c213023 144 Gene3D G3DSA:1.10.287.1080 33 126 5.2E-26 T 11-10-2018 DB34_03795 0fb820eb5fbaf8b05c871c826c213023 144 SUPERFAMILY SSF101386 36 124 1.79E-20 T 11-10-2018 DB34_03795 0fb820eb5fbaf8b05c871c826c213023 144 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 37 120 8.4E-27 T 11-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 DB34_03795 0fb820eb5fbaf8b05c871c826c213023 144 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 34 120 18.628 T 11-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 DB34_03795 0fb820eb5fbaf8b05c871c826c213023 144 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 38 123 4.1E-18 T 11-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 DB34_07055 389f4a6dbfe52545bbf43c421e3b6108 570 Gene3D G3DSA:2.170.16.10 218 375 2.2E-7 T 11-10-2018 DB34_07055 389f4a6dbfe52545bbf43c421e3b6108 570 Pfam PF13403 Hint domain 221 359 4.5E-42 T 11-10-2018 IPR028992 Hedgehog/Intein (Hint) domain DB34_07055 389f4a6dbfe52545bbf43c421e3b6108 570 SUPERFAMILY SSF51294 221 357 1.43E-13 T 11-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 DB34_00090 c9514a73fd26d3b0ea2e78e0f378eff9 184 SUPERFAMILY SSF53218 9 172 3.93E-47 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily DB34_00090 c9514a73fd26d3b0ea2e78e0f378eff9 184 SMART SM00852 16 160 8.8E-34 T 11-10-2018 IPR001453 MoaB/Mog domain DB34_00090 c9514a73fd26d3b0ea2e78e0f378eff9 184 Gene3D G3DSA:3.40.980.10 4 173 2.7E-50 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily DB34_00090 c9514a73fd26d3b0ea2e78e0f378eff9 184 Pfam PF00994 Probable molybdopterin binding domain 16 157 1.1E-34 T 11-10-2018 IPR001453 MoaB/Mog domain DB34_00090 c9514a73fd26d3b0ea2e78e0f378eff9 184 PIRSF PIRSF006443 1 168 3.6E-61 T 11-10-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 DB34_00090 c9514a73fd26d3b0ea2e78e0f378eff9 184 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 10 171 2.9E-77 T 11-10-2018 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 DB34_00090 c9514a73fd26d3b0ea2e78e0f378eff9 184 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 74 87 - T 11-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 DB34_00090 c9514a73fd26d3b0ea2e78e0f378eff9 184 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 13 152 3.4E-37 T 11-10-2018 IPR001453 MoaB/Mog domain DB34_09250 c4edee4a15b31f39b11c070de8265731 76 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 69 5.3E-33 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_09250 c4edee4a15b31f39b11c070de8265731 76 Gene3D G3DSA:2.30.170.50 1 73 1.4E-24 T 11-10-2018 DB34_09250 c4edee4a15b31f39b11c070de8265731 76 ProSitePatterns PS01143 Ribosomal protein L31 signature. 38 59 - T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_09250 c4edee4a15b31f39b11c070de8265731 76 SUPERFAMILY SSF143800 1 70 8.24E-23 T 11-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_09250 c4edee4a15b31f39b11c070de8265731 76 Pfam PF01197 Ribosomal protein L31 1 68 5.4E-27 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_09250 c4edee4a15b31f39b11c070de8265731 76 PRINTS PR01249 Ribosomal protein L31 signature 2 19 3.7E-15 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_09250 c4edee4a15b31f39b11c070de8265731 76 PRINTS PR01249 Ribosomal protein L31 signature 34 49 3.7E-15 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_09250 c4edee4a15b31f39b11c070de8265731 76 PRINTS PR01249 Ribosomal protein L31 signature 49 67 3.7E-15 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_09250 c4edee4a15b31f39b11c070de8265731 76 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 71 25.434 T 11-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_04255 c7cf02bcebbe743a982284b42b966e4f 421 TIGRFAM TIGR01272 gluP: glucose/galactose transporter WARNING 107 406 3.2E-66 T 11-10-2018 IPR005964 Bacterial glucose/galactose transporter GO:0005354|GO:0005355|GO:0015757|GO:0016021|GO:1904659 DB34_04255 c7cf02bcebbe743a982284b42b966e4f 421 SUPERFAMILY SSF103473 13 415 1.83E-33 T 11-10-2018 IPR036259 MFS transporter superfamily DB34_04255 c7cf02bcebbe743a982284b42b966e4f 421 Pfam PF07690 Major Facilitator Superfamily 25 377 1.1E-14 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DB34_04255 c7cf02bcebbe743a982284b42b966e4f 421 Gene3D G3DSA:1.20.1250.20 236 418 5.2E-30 T 11-10-2018 DB34_04255 c7cf02bcebbe743a982284b42b966e4f 421 Gene3D G3DSA:1.20.1250.20 18 227 2.4E-40 T 11-10-2018 DB34_10635 a44531958a35bf026db6eb88c622c97d 349 Gene3D G3DSA:2.40.30.170 34 267 2.7E-32 T 11-10-2018 DB34_10635 a44531958a35bf026db6eb88c622c97d 349 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 47 250 7.6E-11 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DB34_10635 a44531958a35bf026db6eb88c622c97d 349 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 26 342 7.8E-36 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 DB34_10635 a44531958a35bf026db6eb88c622c97d 349 SUPERFAMILY SSF111369 39 247 2.09E-9 T 11-10-2018 DB34_10635 a44531958a35bf026db6eb88c622c97d 349 Gene3D G3DSA:1.10.287.470 82 154 2.7E-32 T 11-10-2018 DB34_10635 a44531958a35bf026db6eb88c622c97d 349 Gene3D G3DSA:2.40.50.100 48 193 2.7E-32 T 11-10-2018 DB34_10635 a44531958a35bf026db6eb88c622c97d 349 Gene3D G3DSA:2.40.420.20 33 336 2.7E-32 T 11-10-2018 DB34_08270 28c18912ae88066eb3fea596e82a515a 327 SUPERFAMILY SSF50129 1 181 1.67E-55 T 11-10-2018 IPR011032 GroES-like superfamily DB34_08270 28c18912ae88066eb3fea596e82a515a 327 TIGRFAM TIGR02822 adh_fam_2: zinc-binding alcohol dehydrogenase family protein 11 326 7.1E-104 T 11-10-2018 IPR014187 Alcohol dehydrogenase, zinc-binding type 2 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 DB34_08270 28c18912ae88066eb3fea596e82a515a 327 SUPERFAMILY SSF51735 138 289 3.42E-22 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily DB34_08270 28c18912ae88066eb3fea596e82a515a 327 SMART SM00829 10 325 8.8E-4 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 DB34_08270 28c18912ae88066eb3fea596e82a515a 327 Gene3D G3DSA:3.40.50.720 147 276 1.2E-84 T 11-10-2018 DB34_08270 28c18912ae88066eb3fea596e82a515a 327 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 11-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 DB34_08270 28c18912ae88066eb3fea596e82a515a 327 Gene3D G3DSA:3.90.180.10 6 318 1.2E-84 T 11-10-2018 DB34_08270 28c18912ae88066eb3fea596e82a515a 327 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 132 1.3E-32 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DB34_09375 f7bada0ecbef9185ee4dfbf28575fe6f 472 Gene3D G3DSA:3.80.30.20 173 406 2.1E-80 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe DB34_09375 f7bada0ecbef9185ee4dfbf28575fe6f 472 Pfam PF01938 TRAM domain 407 464 6.3E-6 T 11-10-2018 IPR002792 TRAM domain DB34_09375 f7bada0ecbef9185ee4dfbf28575fe6f 472 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 178 198 - T 11-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 DB34_09375 f7bada0ecbef9185ee4dfbf28575fe6f 472 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 25 463 1.2E-144 T 11-10-2018 DB34_09375 f7bada0ecbef9185ee4dfbf28575fe6f 472 Pfam PF04055 Radical SAM superfamily 179 352 2.1E-29 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DB34_09375 f7bada0ecbef9185ee4dfbf28575fe6f 472 SUPERFAMILY SSF102114 161 398 4.58E-59 T 11-10-2018 DB34_09375 f7bada0ecbef9185ee4dfbf28575fe6f 472 Gene3D G3DSA:3.40.50.12160 25 158 1.8E-31 T 11-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily DB34_09375 f7bada0ecbef9185ee4dfbf28575fe6f 472 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 26 463 2.0E-139 T 11-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 DB34_09375 f7bada0ecbef9185ee4dfbf28575fe6f 472 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 23 466 70.982 T 11-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 DB34_09375 f7bada0ecbef9185ee4dfbf28575fe6f 472 SMART SM00729 174 394 8.3E-54 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DB34_09375 f7bada0ecbef9185ee4dfbf28575fe6f 472 Pfam PF00919 Uncharacterized protein family UPF0004 26 127 1.8E-28 T 11-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 DB34_09460 f6bcd07eff82a6f6e6634233fff3b809 55 Gene3D G3DSA:2.20.28.120 1 55 2.2E-26 T 11-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_09460 f6bcd07eff82a6f6e6634233fff3b809 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 2 53 13.867 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_09460 f6bcd07eff82a6f6e6634233fff3b809 55 SUPERFAMILY SSF57829 2 53 5.98E-18 T 11-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 DB34_09460 f6bcd07eff82a6f6e6634233fff3b809 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 11-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_09460 f6bcd07eff82a6f6e6634233fff3b809 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 1.2E-22 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_09460 f6bcd07eff82a6f6e6634233fff3b809 55 Pfam PF00471 Ribosomal protein L33 7 53 2.3E-17 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_01175 f8db30caa5feb8db644c18541a85db49 742 SUPERFAMILY SSF81296 126 233 1.4E-25 T 11-10-2018 IPR014756 Immunoglobulin E-set DB34_01175 f8db30caa5feb8db644c18541a85db49 742 SMART SM00642 263 609 6.8E-6 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DB34_01175 f8db30caa5feb8db644c18541a85db49 742 Pfam PF00128 Alpha amylase, catalytic domain 289 358 2.6E-7 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DB34_01175 f8db30caa5feb8db644c18541a85db49 742 Gene3D G3DSA:3.20.20.80 236 636 3.3E-154 T 11-10-2018 DB34_01175 f8db30caa5feb8db644c18541a85db49 742 PIRSF PIRSF000463 17 742 1.5E-273 T 11-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 DB34_01175 f8db30caa5feb8db644c18541a85db49 742 SUPERFAMILY SSF51011 637 739 7.19E-35 T 11-10-2018 DB34_01175 f8db30caa5feb8db644c18541a85db49 742 SUPERFAMILY SSF51445 195 630 1.67E-105 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily DB34_01175 f8db30caa5feb8db644c18541a85db49 742 Gene3D G3DSA:2.60.40.1180 637 740 6.0E-38 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta DB34_01175 f8db30caa5feb8db644c18541a85db49 742 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 642 739 1.9E-23 T 11-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 DB34_01175 f8db30caa5feb8db644c18541a85db49 742 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 136 219 2.9E-21 T 11-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 DB34_01175 f8db30caa5feb8db644c18541a85db49 742 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 36 111 4.6E-5 T 11-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 DB34_01175 f8db30caa5feb8db644c18541a85db49 742 Gene3D G3DSA:2.60.40.10 14 234 7.7E-69 T 11-10-2018 IPR013783 Immunoglobulin-like fold DB34_01175 f8db30caa5feb8db644c18541a85db49 742 SUPERFAMILY SSF81296 27 126 6.65E-17 T 11-10-2018 IPR014756 Immunoglobulin E-set DB34_01175 f8db30caa5feb8db644c18541a85db49 742 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 112 740 42.701 T 11-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 DB34_01175 f8db30caa5feb8db644c18541a85db49 742 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 120 736 6.4E-264 T 11-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 DB34_01320 4c183114c98e3896838e5def02494682 288 Gene3D G3DSA:1.10.10.10 114 209 2.6E-31 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB34_01320 4c183114c98e3896838e5def02494682 288 SUPERFAMILY SSF46785 115 190 6.35E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB34_01320 4c183114c98e3896838e5def02494682 288 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 35 201 9.4E-30 T 11-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 DB34_01320 4c183114c98e3896838e5def02494682 288 SUPERFAMILY SSF46785 29 113 5.85E-12 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB34_01320 4c183114c98e3896838e5def02494682 288 Gene3D G3DSA:1.10.10.10 26 113 1.0E-13 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB34_01320 4c183114c98e3896838e5def02494682 288 Pfam PF04079 Segregation and condensation complex subunit ScpB 35 198 1.3E-45 T 11-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 DB34_02245 9a5c9b931c90d919698141e9f80e175c 204 TIGRFAM TIGR00101 ureG: urease accessory protein UreG 9 199 1.0E-102 T 11-10-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 DB34_02245 9a5c9b931c90d919698141e9f80e175c 204 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 11 181 2.0E-36 T 11-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain DB34_02245 9a5c9b931c90d919698141e9f80e175c 204 SUPERFAMILY SSF52540 7 200 6.58E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_02245 9a5c9b931c90d919698141e9f80e175c 204 Gene3D G3DSA:3.40.50.300 9 202 3.5E-49 T 11-10-2018 DB34_02245 9a5c9b931c90d919698141e9f80e175c 204 Hamap MF_01389 Urease accessory protein UreG [ureG]. 7 202 46.943 T 11-10-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 DB34_02245 9a5c9b931c90d919698141e9f80e175c 204 PIRSF PIRSF005624 3 204 3.9E-48 T 11-10-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 DB34_06540 74e8bad6053a8a343a6e9501a5546c0b 128 Gene3D G3DSA:1.10.443.10 1 121 2.4E-16 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 DB34_06540 74e8bad6053a8a343a6e9501a5546c0b 128 Pfam PF00589 Phage integrase family 43 104 1.1E-12 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 DB34_06540 74e8bad6053a8a343a6e9501a5546c0b 128 SUPERFAMILY SSF56349 3 107 3.24E-18 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DB34_04450 104fa88833f3c34ff5c92a851d9895b4 742 ProSitePatterns PS00363 Bacterial quinoprotein dehydrogenases signature 1. 54 82 - T 11-10-2018 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 DB34_04450 104fa88833f3c34ff5c92a851d9895b4 742 Gene3D G3DSA:2.140.10.10 30 624 1.9E-203 T 11-10-2018 DB34_04450 104fa88833f3c34ff5c92a851d9895b4 742 TIGRFAM TIGR03075 PQQ_enz_alc_DH: PQQ-dependent dehydrogenase, methanol/ethanol family 40 583 2.5E-197 T 11-10-2018 IPR017512 PQQ-dependent dehydrogenase, methanol/ethanol family GO:0005509|GO:0016020|GO:0016614|GO:0055114 DB34_04450 104fa88833f3c34ff5c92a851d9895b4 742 ProSitePatterns PS00364 Bacterial quinoprotein dehydrogenases signature 2. 280 301 - T 11-10-2018 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 DB34_04450 104fa88833f3c34ff5c92a851d9895b4 742 Pfam PF13360 PQQ-like domain 507 577 1.3E-4 T 11-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat DB34_04450 104fa88833f3c34ff5c92a851d9895b4 742 Pfam PF13360 PQQ-like domain 83 235 7.9E-13 T 11-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat DB34_04450 104fa88833f3c34ff5c92a851d9895b4 742 Gene3D G3DSA:1.10.760.10 625 731 3.0E-17 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DB34_04450 104fa88833f3c34ff5c92a851d9895b4 742 SMART SM00564 149 181 3.3E-5 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat DB34_04450 104fa88833f3c34ff5c92a851d9895b4 742 SMART SM00564 524 555 49.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat DB34_04450 104fa88833f3c34ff5c92a851d9895b4 742 SMART SM00564 356 389 610.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat DB34_04450 104fa88833f3c34ff5c92a851d9895b4 742 SMART SM00564 200 238 3.5E-4 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat DB34_04450 104fa88833f3c34ff5c92a851d9895b4 742 SMART SM00564 99 130 1.3E-5 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat DB34_04450 104fa88833f3c34ff5c92a851d9895b4 742 SUPERFAMILY SSF50998 51 635 1.57E-159 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily DB34_04450 104fa88833f3c34ff5c92a851d9895b4 742 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 638 711 3.3E-9 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB34_04450 104fa88833f3c34ff5c92a851d9895b4 742 SUPERFAMILY SSF46626 625 718 7.16E-16 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DB34_09105 b33b0821f2084481e7a524a5cd2bb461 147 Gene3D G3DSA:3.90.1010.10 2 145 2.2E-46 T 11-10-2018 DB34_09105 b33b0821f2084481e7a524a5cd2bb461 147 Pfam PF02657 Fe-S metabolism associated domain 22 139 7.5E-42 T 11-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like DB34_09105 b33b0821f2084481e7a524a5cd2bb461 147 SUPERFAMILY SSF82649 9 143 1.46E-41 T 11-10-2018 DB34_08265 082572a372bcbcff760c16ac7c8c6c33 110 SMART SM00418 16 93 1.7E-6 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DB34_08265 082572a372bcbcff760c16ac7c8c6c33 110 Pfam PF12840 Helix-turn-helix domain 17 72 8.7E-11 T 11-10-2018 DB34_08265 082572a372bcbcff760c16ac7c8c6c33 110 Gene3D G3DSA:1.10.10.10 2 90 2.3E-11 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB34_08265 082572a372bcbcff760c16ac7c8c6c33 110 SUPERFAMILY SSF46785 4 91 7.85E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB34_08265 082572a372bcbcff760c16ac7c8c6c33 110 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 18 33 7.2E-7 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DB34_08265 082572a372bcbcff760c16ac7c8c6c33 110 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 7.2E-7 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DB34_00505 f15a40e1f4f7238f1ee92110e76bfed3 434 Gene3D G3DSA:3.40.50.1000 49 410 3.0E-87 T 11-10-2018 IPR023214 HAD superfamily DB34_00505 f15a40e1f4f7238f1ee92110e76bfed3 434 SUPERFAMILY SSF56784 256 343 4.44E-8 T 11-10-2018 IPR036412 HAD-like superfamily DB34_00505 f15a40e1f4f7238f1ee92110e76bfed3 434 Gene3D G3DSA:1.20.1440.320 102 259 3.0E-87 T 11-10-2018 DB34_00035 b63ea2cd5d2b52cd06bb25177858f7db 756 Gene3D G3DSA:3.40.50.300 216 405 1.1E-66 T 11-10-2018 DB34_00035 b63ea2cd5d2b52cd06bb25177858f7db 756 Gene3D G3DSA:1.10.8.630 26 142 2.5E-21 T 11-10-2018 DB34_00035 b63ea2cd5d2b52cd06bb25177858f7db 756 Hamap MF_00983 Probable primosomal protein N' [priA]. 29 755 23.338 T 11-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 DB34_00035 b63ea2cd5d2b52cd06bb25177858f7db 756 SUPERFAMILY SSF52540 219 407 6.17E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_00035 b63ea2cd5d2b52cd06bb25177858f7db 756 TIGRFAM TIGR00595 priA: primosomal protein N' 248 753 1.9E-191 T 11-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 DB34_00035 b63ea2cd5d2b52cd06bb25177858f7db 756 SMART SM00487 220 424 1.3E-19 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DB34_00035 b63ea2cd5d2b52cd06bb25177858f7db 756 SMART SM00490 522 619 0.009 T 11-10-2018 IPR001650 Helicase, C-terminal DB34_00035 b63ea2cd5d2b52cd06bb25177858f7db 756 SUPERFAMILY SSF52540 247 647 4.18E-26 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_00035 b63ea2cd5d2b52cd06bb25177858f7db 756 Pfam PF00270 DEAD/DEAH box helicase 247 391 2.4E-13 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DB34_03065 432d59c3d72e860944b2755fa521a024 495 ProSitePatterns PS00571 Amidases signature. 157 188 - T 11-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 DB34_03065 432d59c3d72e860944b2755fa521a024 495 Gene3D G3DSA:3.90.1300.10 1 489 3.6E-189 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DB34_03065 432d59c3d72e860944b2755fa521a024 495 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 13 480 4.0E-168 T 11-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DB34_03065 432d59c3d72e860944b2755fa521a024 495 SUPERFAMILY SSF75304 3 487 2.75E-156 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DB34_03065 432d59c3d72e860944b2755fa521a024 495 Pfam PF01425 Amidase 23 471 3.8E-150 T 11-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DB34_03065 432d59c3d72e860944b2755fa521a024 495 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 10 482 90.967 T 11-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DB34_12385 7e0126a2e92f54028f72d168b2d333c7 444 Gene3D G3DSA:1.10.3120.10 118 426 1.8E-90 T 11-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 DB34_12385 7e0126a2e92f54028f72d168b2d333c7 444 SUPERFAMILY SSF109998 252 437 4.55E-48 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily DB34_12385 7e0126a2e92f54028f72d168b2d333c7 444 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 162 240 3.1E-14 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain DB34_12385 7e0126a2e92f54028f72d168b2d333c7 444 Hamap MF_00303 Trigger factor [tig]. 1 427 21.258 T 11-10-2018 IPR005215 Trigger factor GO:0015031 DB34_12385 7e0126a2e92f54028f72d168b2d333c7 444 TIGRFAM TIGR00115 tig: trigger factor 11 421 1.1E-130 T 11-10-2018 IPR005215 Trigger factor GO:0015031 DB34_12385 7e0126a2e92f54028f72d168b2d333c7 444 PIRSF PIRSF003095 1 441 2.1E-129 T 11-10-2018 IPR005215 Trigger factor GO:0015031 DB34_12385 7e0126a2e92f54028f72d168b2d333c7 444 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 264 422 4.1E-39 T 11-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 DB34_12385 7e0126a2e92f54028f72d168b2d333c7 444 Pfam PF05697 Bacterial trigger factor protein (TF) 1 145 1.3E-39 T 11-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 DB34_12385 7e0126a2e92f54028f72d168b2d333c7 444 SUPERFAMILY SSF54534 90 246 4.32E-31 T 11-10-2018 DB34_12385 7e0126a2e92f54028f72d168b2d333c7 444 Gene3D G3DSA:3.30.70.1050 1 117 2.5E-34 T 11-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 DB34_12385 7e0126a2e92f54028f72d168b2d333c7 444 SUPERFAMILY SSF102735 1 131 8.89E-36 T 11-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 DB34_12385 7e0126a2e92f54028f72d168b2d333c7 444 Gene3D G3DSA:3.10.50.40 152 250 1.8E-90 T 11-10-2018 DB34_02700 91f6a4d0848a96beec5a261288d99e7c 74 Hamap MF_01396 ATP synthase subunit c [atpH]. 4 72 13.618 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB34_02700 91f6a4d0848a96beec5a261288d99e7c 74 Pfam PF00137 ATP synthase subunit C 9 71 1.9E-11 T 11-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 DB34_02700 91f6a4d0848a96beec5a261288d99e7c 74 Gene3D G3DSA:1.20.20.10 2 74 9.7E-23 T 11-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB34_02700 91f6a4d0848a96beec5a261288d99e7c 74 ProSitePatterns PS00605 ATP synthase c subunit signature. 37 58 - T 11-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB34_02700 91f6a4d0848a96beec5a261288d99e7c 74 PRINTS PR00124 ATP synthase C subunit signature 47 72 1.7E-27 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB34_02700 91f6a4d0848a96beec5a261288d99e7c 74 PRINTS PR00124 ATP synthase C subunit signature 9 28 1.7E-27 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB34_02700 91f6a4d0848a96beec5a261288d99e7c 74 PRINTS PR00124 ATP synthase C subunit signature 30 45 1.7E-27 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB34_02700 91f6a4d0848a96beec5a261288d99e7c 74 SUPERFAMILY SSF81333 5 73 2.09E-16 T 11-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily DB34_02505 979baeb7acf3e63afd6efa4b033d6e39 954 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 8 952 25.315 T 11-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 DB34_02505 979baeb7acf3e63afd6efa4b033d6e39 954 SUPERFAMILY SSF53383 461 947 2.75E-102 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB34_02505 979baeb7acf3e63afd6efa4b033d6e39 954 Pfam PF01212 Beta-eliminating lyase 537 684 1.2E-9 T 11-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 DB34_02505 979baeb7acf3e63afd6efa4b033d6e39 954 Gene3D G3DSA:3.40.640.10 95 354 1.6E-106 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB34_02505 979baeb7acf3e63afd6efa4b033d6e39 954 Gene3D G3DSA:3.40.640.10 525 748 5.5E-61 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB34_02505 979baeb7acf3e63afd6efa4b033d6e39 954 Pfam PF02347 Glycine cleavage system P-protein 17 440 2.9E-177 T 11-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 DB34_02505 979baeb7acf3e63afd6efa4b033d6e39 954 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 17 946 0.0 T 11-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 DB34_02505 979baeb7acf3e63afd6efa4b033d6e39 954 Gene3D G3DSA:3.90.1150.10 761 898 2.5E-38 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB34_02505 979baeb7acf3e63afd6efa4b033d6e39 954 SUPERFAMILY SSF53383 17 438 1.54E-102 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB34_07760 6bad3d35c127fde8f293d0c362040c6e 855 Gene3D G3DSA:3.40.50.300 200 365 2.3E-46 T 11-10-2018 DB34_07760 6bad3d35c127fde8f293d0c362040c6e 855 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 139 148 - T 11-10-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site DB34_07760 6bad3d35c127fde8f293d0c362040c6e 855 PIRSF PIRSF005496 12 855 6.3E-261 T 11-10-2018 DB34_07760 6bad3d35c127fde8f293d0c362040c6e 855 SMART SM00847 410 541 4.6E-14 T 11-10-2018 IPR007502 Helicase-associated domain GO:0004386 DB34_07760 6bad3d35c127fde8f293d0c362040c6e 855 SMART SM00490 248 347 1.2E-18 T 11-10-2018 IPR001650 Helicase, C-terminal DB34_07760 6bad3d35c127fde8f293d0c362040c6e 855 Gene3D G3DSA:1.20.120.1080 397 479 1.3E-11 T 11-10-2018 DB34_07760 6bad3d35c127fde8f293d0c362040c6e 855 SMART SM00487 6 206 1.5E-15 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DB34_07760 6bad3d35c127fde8f293d0c362040c6e 855 Gene3D G3DSA:3.40.50.300 13 199 3.9E-49 T 11-10-2018 DB34_07760 6bad3d35c127fde8f293d0c362040c6e 855 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 17 854 7.3E-246 T 11-10-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 DB34_07760 6bad3d35c127fde8f293d0c362040c6e 855 SUPERFAMILY SSF52540 41 358 3.21E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_07760 6bad3d35c127fde8f293d0c362040c6e 855 Pfam PF08482 ATP-dependent helicase C-terminal 713 843 1.2E-41 T 11-10-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal DB34_07760 6bad3d35c127fde8f293d0c362040c6e 855 Pfam PF04408 Helicase associated domain (HA2) 411 504 1.6E-16 T 11-10-2018 IPR007502 Helicase-associated domain GO:0004386 DB34_07760 6bad3d35c127fde8f293d0c362040c6e 855 Pfam PF00271 Helicase conserved C-terminal domain 231 345 9.2E-14 T 11-10-2018 IPR001650 Helicase, C-terminal DB34_08405 bb2906d72c2b233a9fd38141ed080dfa 339 Pfam PF01007 Inward rectifier potassium channel 62 338 1.9E-34 T 11-10-2018 IPR016449 Potassium channel, inwardly rectifying, Kir GO:0005242|GO:0006813|GO:0016021 DB34_08405 bb2906d72c2b233a9fd38141ed080dfa 339 SUPERFAMILY SSF81296 161 338 1.17E-51 T 11-10-2018 IPR014756 Immunoglobulin E-set DB34_08405 bb2906d72c2b233a9fd38141ed080dfa 339 PRINTS PR01320 Inward rectifier K+ channel superfamily signature 89 115 2.3E-8 T 11-10-2018 IPR016449 Potassium channel, inwardly rectifying, Kir GO:0005242|GO:0006813|GO:0016021 DB34_08405 bb2906d72c2b233a9fd38141ed080dfa 339 PRINTS PR01320 Inward rectifier K+ channel superfamily signature 280 300 2.3E-8 T 11-10-2018 IPR016449 Potassium channel, inwardly rectifying, Kir GO:0005242|GO:0006813|GO:0016021 DB34_08405 bb2906d72c2b233a9fd38141ed080dfa 339 PRINTS PR01320 Inward rectifier K+ channel superfamily signature 301 318 2.3E-8 T 11-10-2018 IPR016449 Potassium channel, inwardly rectifying, Kir GO:0005242|GO:0006813|GO:0016021 DB34_08405 bb2906d72c2b233a9fd38141ed080dfa 339 PRINTS PR01320 Inward rectifier K+ channel superfamily signature 249 267 2.3E-8 T 11-10-2018 IPR016449 Potassium channel, inwardly rectifying, Kir GO:0005242|GO:0006813|GO:0016021 DB34_08405 bb2906d72c2b233a9fd38141ed080dfa 339 PRINTS PR01320 Inward rectifier K+ channel superfamily signature 326 339 2.3E-8 T 11-10-2018 IPR016449 Potassium channel, inwardly rectifying, Kir GO:0005242|GO:0006813|GO:0016021 DB34_08405 bb2906d72c2b233a9fd38141ed080dfa 339 Gene3D G3DSA:2.60.40.1400 182 339 6.6E-42 T 11-10-2018 IPR013518 Potassium channel, inwardly rectifying, Kir, cytoplasmic DB34_08405 bb2906d72c2b233a9fd38141ed080dfa 339 SUPERFAMILY SSF81324 77 186 5.36E-23 T 11-10-2018 DB34_08405 bb2906d72c2b233a9fd38141ed080dfa 339 Gene3D G3DSA:1.10.287.70 78 181 6.2E-32 T 11-10-2018 DB34_07270 a869227abe1ba828f83f1fae8d552dd2 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 11-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 DB34_07270 a869227abe1ba828f83f1fae8d552dd2 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 4.7E-42 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DB34_07270 a869227abe1ba828f83f1fae8d552dd2 112 SMART SM00938 4 105 5.0E-67 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DB34_07270 a869227abe1ba828f83f1fae8d552dd2 112 Gene3D G3DSA:3.30.70.120 1 112 6.9E-49 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal DB34_07270 a869227abe1ba828f83f1fae8d552dd2 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 11-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 DB34_07270 a869227abe1ba828f83f1fae8d552dd2 112 SUPERFAMILY SSF54913 1 112 3.89E-46 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta DB34_07270 a869227abe1ba828f83f1fae8d552dd2 112 PRINTS PR00340 P-II protein signature 2 17 9.1E-42 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DB34_07270 a869227abe1ba828f83f1fae8d552dd2 112 PRINTS PR00340 P-II protein signature 23 41 9.1E-42 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DB34_07270 a869227abe1ba828f83f1fae8d552dd2 112 PRINTS PR00340 P-II protein signature 52 75 9.1E-42 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DB34_07270 a869227abe1ba828f83f1fae8d552dd2 112 PRINTS PR00340 P-II protein signature 83 103 9.1E-42 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DB34_07270 a869227abe1ba828f83f1fae8d552dd2 112 PIRSF PIRSF039144 1 112 1.4E-54 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DB34_09480 abaceaaf8e0ce3e7fd33a32faa7e0815 323 Pfam PF01266 FAD dependent oxidoreductase 7 317 5.6E-42 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DB34_09480 abaceaaf8e0ce3e7fd33a32faa7e0815 323 TIGRFAM TIGR02352 thiamin_ThiO: glycine oxidase ThiO 7 319 1.0E-79 T 11-10-2018 IPR012727 Glycine oxidase ThiO GO:0016491|GO:0050660 KEGG: 00730+1.4.3.19|MetaCyc: PWY-7396|MetaCyc: PWY-7806 DB34_09480 abaceaaf8e0ce3e7fd33a32faa7e0815 323 Gene3D G3DSA:3.30.9.10 84 280 2.2E-48 T 11-10-2018 DB34_09480 abaceaaf8e0ce3e7fd33a32faa7e0815 323 SUPERFAMILY SSF51971 4 320 5.06E-30 T 11-10-2018 DB34_09480 abaceaaf8e0ce3e7fd33a32faa7e0815 323 Gene3D G3DSA:3.50.50.60 9 318 2.2E-48 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_09480 abaceaaf8e0ce3e7fd33a32faa7e0815 323 SUPERFAMILY SSF54373 190 279 1.96E-20 T 11-10-2018 DB34_04235 047973e6d96fcb4fe9a2eaf313cb24e8 121 Gene3D G3DSA:1.10.10.10 1 119 5.7E-34 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB34_04235 047973e6d96fcb4fe9a2eaf313cb24e8 121 SUPERFAMILY SSF46785 4 102 2.5E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB34_04235 047973e6d96fcb4fe9a2eaf313cb24e8 121 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 23 82 1.4E-10 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB34_07360 ccd3ae8a80794b8c772bf3b2366ae561 238 SMART SM00358 171 237 9.1E-21 T 11-10-2018 IPR014720 Double-stranded RNA-binding domain DB34_07360 ccd3ae8a80794b8c772bf3b2366ae561 238 Pfam PF00035 Double-stranded RNA binding motif 171 236 3.4E-11 T 11-10-2018 IPR014720 Double-stranded RNA-binding domain DB34_07360 ccd3ae8a80794b8c772bf3b2366ae561 238 Gene3D G3DSA:1.10.1520.10 8 163 1.1E-40 T 11-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 DB34_07360 ccd3ae8a80794b8c772bf3b2366ae561 238 Hamap MF_00104 Ribonuclease 3 [rnc]. 12 233 25.944 T 11-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 DB34_07360 ccd3ae8a80794b8c772bf3b2366ae561 238 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 13 236 6.3E-61 T 11-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 DB34_07360 ccd3ae8a80794b8c772bf3b2366ae561 238 SUPERFAMILY SSF54768 127 236 2.99E-23 T 11-10-2018 DB34_07360 ccd3ae8a80794b8c772bf3b2366ae561 238 SMART SM00535 24 166 5.8E-37 T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 DB34_07360 ccd3ae8a80794b8c772bf3b2366ae561 238 Pfam PF14622 Ribonuclease-III-like 22 157 1.5E-28 T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 DB34_07360 ccd3ae8a80794b8c772bf3b2366ae561 238 SUPERFAMILY SSF69065 8 173 8.2E-40 T 11-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 DB34_07360 ccd3ae8a80794b8c772bf3b2366ae561 238 Gene3D G3DSA:3.30.160.20 169 237 8.8E-19 T 11-10-2018 DB34_12805 b5e0e3095a0b0d1548cf919c58818ed8 586 PIRSF PIRSF001589 1 579 8.8E-146 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 DB34_12805 b5e0e3095a0b0d1548cf919c58818ed8 586 Gene3D G3DSA:3.60.20.10 4 179 8.9E-43 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DB34_12805 b5e0e3095a0b0d1548cf919c58818ed8 586 SUPERFAMILY SSF56235 1 211 5.83E-44 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DB34_12805 b5e0e3095a0b0d1548cf919c58818ed8 586 Pfam PF13537 Glutamine amidotransferase domain 48 161 3.7E-30 T 11-10-2018 IPR017932 Glutamine amidotransferase type 2 domain DB34_12805 b5e0e3095a0b0d1548cf919c58818ed8 586 SUPERFAMILY SSF52402 226 531 7.33E-61 T 11-10-2018 DB34_12805 b5e0e3095a0b0d1548cf919c58818ed8 586 Pfam PF00733 Asparagine synthase 237 568 1.6E-74 T 11-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 DB34_12805 b5e0e3095a0b0d1548cf919c58818ed8 586 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 493 4.4E-110 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 DB34_02845 2878b34663cf64c8a1f2818e790e8374 302 Hamap MF_01408 Flavin-dependent thymidylate synthase [thyX]. 40 262 28.411 T 11-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 DB34_02845 2878b34663cf64c8a1f2818e790e8374 302 SUPERFAMILY SSF69796 38 260 7.32E-67 T 11-10-2018 IPR036098 Thymidylate synthase ThyX superfamily GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 DB34_02845 2878b34663cf64c8a1f2818e790e8374 302 Pfam PF02511 Thymidylate synthase complementing protein 46 248 2.4E-54 T 11-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 DB34_02845 2878b34663cf64c8a1f2818e790e8374 302 TIGRFAM TIGR02170 thyX: thymidylate synthase, flavin-dependent 45 254 6.1E-64 T 11-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 DB34_02845 2878b34663cf64c8a1f2818e790e8374 302 Gene3D G3DSA:3.30.1360.170 30 268 3.0E-69 T 11-10-2018 DB34_02570 0dfdfe8483c25da7d55bdd186e1fe5c4 716 Gene3D G3DSA:3.30.230.70 1 230 4.0E-86 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DB34_02570 0dfdfe8483c25da7d55bdd186e1fe5c4 716 SMART SM00322 551 616 3.1E-12 T 11-10-2018 IPR004087 K Homology domain GO:0003676 DB34_02570 0dfdfe8483c25da7d55bdd186e1fe5c4 716 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 3 692 30.748 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 DB34_02570 0dfdfe8483c25da7d55bdd186e1fe5c4 716 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 243 319 2.9E-12 T 11-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 DB34_02570 0dfdfe8483c25da7d55bdd186e1fe5c4 716 SUPERFAMILY SSF55666 145 234 5.61E-27 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DB34_02570 0dfdfe8483c25da7d55bdd186e1fe5c4 716 Gene3D G3DSA:2.40.50.140 621 693 1.0E-28 T 11-10-2018 DB34_02570 0dfdfe8483c25da7d55bdd186e1fe5c4 716 SUPERFAMILY SSF54211 292 487 2.99E-48 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DB34_02570 0dfdfe8483c25da7d55bdd186e1fe5c4 716 Pfam PF03725 3' exoribonuclease family, domain 2 459 527 6.7E-5 T 11-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DB34_02570 0dfdfe8483c25da7d55bdd186e1fe5c4 716 Pfam PF03725 3' exoribonuclease family, domain 2 147 210 3.9E-14 T 11-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DB34_02570 0dfdfe8483c25da7d55bdd186e1fe5c4 716 Pfam PF00013 KH domain 555 612 1.9E-11 T 11-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 DB34_02570 0dfdfe8483c25da7d55bdd186e1fe5c4 716 SUPERFAMILY SSF54211 2 144 2.02E-53 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DB34_02570 0dfdfe8483c25da7d55bdd186e1fe5c4 716 SMART SM00316 619 689 3.8E-21 T 11-10-2018 IPR022967 RNA-binding domain, S1 DB34_02570 0dfdfe8483c25da7d55bdd186e1fe5c4 716 SUPERFAMILY SSF54791 554 639 4.55E-22 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 DB34_02570 0dfdfe8483c25da7d55bdd186e1fe5c4 716 PIRSF PIRSF005499 1 716 4.0E-293 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 DB34_02570 0dfdfe8483c25da7d55bdd186e1fe5c4 716 SUPERFAMILY SSF55666 449 547 1.32E-27 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DB34_02570 0dfdfe8483c25da7d55bdd186e1fe5c4 716 SUPERFAMILY SSF50249 619 701 1.34E-19 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB34_02570 0dfdfe8483c25da7d55bdd186e1fe5c4 716 Pfam PF00575 S1 RNA binding domain 617 689 1.2E-16 T 11-10-2018 IPR003029 S1 domain GO:0003676 DB34_02570 0dfdfe8483c25da7d55bdd186e1fe5c4 716 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 10 690 0.0 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 DB34_02570 0dfdfe8483c25da7d55bdd186e1fe5c4 716 Gene3D G3DSA:3.30.230.70 234 548 2.4E-114 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DB34_02570 0dfdfe8483c25da7d55bdd186e1fe5c4 716 Gene3D G3DSA:3.30.1370.10 549 620 2.5E-19 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 DB34_02570 0dfdfe8483c25da7d55bdd186e1fe5c4 716 Pfam PF01138 3' exoribonuclease family, domain 1 14 144 3.0E-22 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DB34_02570 0dfdfe8483c25da7d55bdd186e1fe5c4 716 Pfam PF01138 3' exoribonuclease family, domain 1 323 455 6.4E-20 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DB34_09615 c5e50710b0a10d8be35b924fe8a39150 417 Gene3D G3DSA:3.30.2130.10 258 417 3.0E-57 T 11-10-2018 DB34_09615 c5e50710b0a10d8be35b924fe8a39150 417 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 8 413 1.4E-128 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DB34_09615 c5e50710b0a10d8be35b924fe8a39150 417 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 67 412 5.4E-114 T 11-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DB34_09615 c5e50710b0a10d8be35b924fe8a39150 417 Pfam PF00696 Amino acid kinase family 7 233 2.6E-47 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 DB34_09615 c5e50710b0a10d8be35b924fe8a39150 417 Gene3D G3DSA:3.40.1160.10 6 257 4.1E-82 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DB34_09615 c5e50710b0a10d8be35b924fe8a39150 417 Pfam PF01842 ACT domain 280 337 2.2E-12 T 11-10-2018 IPR002912 ACT domain DB34_09615 c5e50710b0a10d8be35b924fe8a39150 417 SUPERFAMILY SSF55021 341 415 1.69E-21 T 11-10-2018 DB34_09615 c5e50710b0a10d8be35b924fe8a39150 417 PIRSF PIRSF000726 62 417 2.3E-124 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DB34_09615 c5e50710b0a10d8be35b924fe8a39150 417 PIRSF PIRSF000726 6 66 4.9E-20 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DB34_09615 c5e50710b0a10d8be35b924fe8a39150 417 SUPERFAMILY SSF53633 7 255 4.97E-71 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DB34_09615 c5e50710b0a10d8be35b924fe8a39150 417 ProSitePatterns PS00324 Aspartokinase signature. 9 17 - T 11-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DB34_09615 c5e50710b0a10d8be35b924fe8a39150 417 SUPERFAMILY SSF55021 259 337 4.1E-19 T 11-10-2018 DB34_09615 c5e50710b0a10d8be35b924fe8a39150 417 Pfam PF13840 ACT domain 347 409 6.4E-14 T 11-10-2018 IPR027795 CASTOR, ACT domain DB34_11235 d45f62bc914ba1cf131436e4ecf3f9f1 423 SUPERFAMILY SSF56176 157 318 9.0E-40 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 DB34_11235 d45f62bc914ba1cf131436e4ecf3f9f1 423 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 DB34_11235 d45f62bc914ba1cf131436e4ecf3f9f1 423 Gene3D G3DSA:3.30.465.10 155 319 1.5E-41 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 DB34_11235 d45f62bc914ba1cf131436e4ecf3f9f1 423 Gene3D G3DSA:3.10.20.30 1 74 1.1E-26 T 11-10-2018 IPR012675 Beta-grasp domain superfamily DB34_11235 d45f62bc914ba1cf131436e4ecf3f9f1 423 SUPERFAMILY SSF54292 2 76 2.49E-20 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 DB34_11235 d45f62bc914ba1cf131436e4ecf3f9f1 423 Gene3D G3DSA:1.10.150.120 76 154 2.9E-19 T 11-10-2018 DB34_11235 d45f62bc914ba1cf131436e4ecf3f9f1 423 SUPERFAMILY SSF47741 82 144 7.2E-19 T 11-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily DB34_11235 d45f62bc914ba1cf131436e4ecf3f9f1 423 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 5 53 6.3E-7 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 DB34_11235 d45f62bc914ba1cf131436e4ecf3f9f1 423 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 157 318 2.7E-37 T 11-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 DB34_11235 d45f62bc914ba1cf131436e4ecf3f9f1 423 SUPERFAMILY SSF55447 325 418 2.62E-16 T 11-10-2018 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily DB34_11235 d45f62bc914ba1cf131436e4ecf3f9f1 423 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 326 418 6.4E-14 T 11-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal DB34_11235 d45f62bc914ba1cf131436e4ecf3f9f1 423 Gene3D G3DSA:3.30.390.50 325 421 4.4E-18 T 11-10-2018 DB34_11235 d45f62bc914ba1cf131436e4ecf3f9f1 423 SMART SM01092 325 421 7.0E-8 T 11-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal DB34_11235 d45f62bc914ba1cf131436e4ecf3f9f1 423 Pfam PF01799 [2Fe-2S] binding domain 71 137 2.5E-18 T 11-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 DB34_09965 91a7ba446e169e5e414b04d7c6d5311d 155 Gene3D G3DSA:3.40.1350.10 49 155 2.0E-29 T 11-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 DB34_09965 91a7ba446e169e5e414b04d7c6d5311d 155 Pfam PF02021 Uncharacterised protein family UPF0102 50 137 4.0E-21 T 11-10-2018 IPR003509 Uncharacterised protein family UPF0102 DB34_09965 91a7ba446e169e5e414b04d7c6d5311d 155 Hamap MF_00048 UPF0102 protein YraN [yraN]. 43 152 17.892 T 11-10-2018 IPR003509 Uncharacterised protein family UPF0102 DB34_09965 91a7ba446e169e5e414b04d7c6d5311d 155 SUPERFAMILY SSF52980 44 147 3.54E-19 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 DB34_07200 b99dd8bbb11053a4032b1ac83da53675 486 Gene3D G3DSA:2.40.33.10 85 181 5.8E-166 T 11-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DB34_07200 b99dd8bbb11053a4032b1ac83da53675 486 Pfam PF02887 Pyruvate kinase, alpha/beta domain 367 482 6.3E-30 T 11-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DB34_07200 b99dd8bbb11053a4032b1ac83da53675 486 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 18 485 3.5E-149 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DB34_07200 b99dd8bbb11053a4032b1ac83da53675 486 Gene3D G3DSA:3.40.1380.20 345 481 5.8E-166 T 11-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DB34_07200 b99dd8bbb11053a4032b1ac83da53675 486 Pfam PF00224 Pyruvate kinase, barrel domain 18 346 1.7E-115 T 11-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DB34_07200 b99dd8bbb11053a4032b1ac83da53675 486 PRINTS PR01050 Pyruvate kinase family signature 322 338 2.9E-66 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DB34_07200 b99dd8bbb11053a4032b1ac83da53675 486 PRINTS PR01050 Pyruvate kinase family signature 253 277 2.9E-66 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DB34_07200 b99dd8bbb11053a4032b1ac83da53675 486 PRINTS PR01050 Pyruvate kinase family signature 303 321 2.9E-66 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DB34_07200 b99dd8bbb11053a4032b1ac83da53675 486 PRINTS PR01050 Pyruvate kinase family signature 278 302 2.9E-66 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DB34_07200 b99dd8bbb11053a4032b1ac83da53675 486 PRINTS PR01050 Pyruvate kinase family signature 199 213 2.9E-66 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DB34_07200 b99dd8bbb11053a4032b1ac83da53675 486 PRINTS PR01050 Pyruvate kinase family signature 74 90 2.9E-66 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DB34_07200 b99dd8bbb11053a4032b1ac83da53675 486 PRINTS PR01050 Pyruvate kinase family signature 226 252 2.9E-66 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DB34_07200 b99dd8bbb11053a4032b1ac83da53675 486 SUPERFAMILY SSF52935 332 485 9.81E-35 T 11-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DB34_07200 b99dd8bbb11053a4032b1ac83da53675 486 SUPERFAMILY SSF50800 85 180 2.79E-25 T 11-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily DB34_07200 b99dd8bbb11053a4032b1ac83da53675 486 Gene3D G3DSA:3.20.20.60 18 344 5.8E-166 T 11-10-2018 DB34_07200 b99dd8bbb11053a4032b1ac83da53675 486 SUPERFAMILY SSF51621 16 351 1.26E-96 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 DB34_04525 dab45f368c47f5c5c1c4f29a183a43b8 378 PIRSF PIRSF000390 5 378 1.1E-93 T 11-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase DB34_04525 dab45f368c47f5c5c1c4f29a183a43b8 378 SUPERFAMILY SSF53383 21 377 5.57E-96 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB34_04525 dab45f368c47f5c5c1c4f29a183a43b8 378 Gene3D G3DSA:3.90.1150.10 253 378 4.2E-37 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB34_04525 dab45f368c47f5c5c1c4f29a183a43b8 378 Gene3D G3DSA:3.40.640.10 2 252 9.7E-78 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB34_04525 dab45f368c47f5c5c1c4f29a183a43b8 378 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 25 377 2.8E-103 T 11-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase DB34_08900 821655bc5126ba1af8fb0e03f5dd5200 512 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 10 511 48.788 T 11-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DB34_08900 821655bc5126ba1af8fb0e03f5dd5200 512 Pfam PF01676 Metalloenzyme superfamily 11 499 1.2E-79 T 11-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 DB34_08900 821655bc5126ba1af8fb0e03f5dd5200 512 SUPERFAMILY SSF53649 10 510 1.8E-79 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 DB34_08900 821655bc5126ba1af8fb0e03f5dd5200 512 Gene3D G3DSA:3.40.720.10 11 510 6.4E-209 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 DB34_08900 821655bc5126ba1af8fb0e03f5dd5200 512 Gene3D G3DSA:3.40.1450.10 83 311 6.4E-209 T 11-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DB34_08900 821655bc5126ba1af8fb0e03f5dd5200 512 SUPERFAMILY SSF64158 83 301 1.09E-76 T 11-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DB34_08900 821655bc5126ba1af8fb0e03f5dd5200 512 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 11 510 1.9E-209 T 11-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DB34_08900 821655bc5126ba1af8fb0e03f5dd5200 512 PIRSF PIRSF001492 4 512 1.2E-200 T 11-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DB34_08900 821655bc5126ba1af8fb0e03f5dd5200 512 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 90 296 4.2E-72 T 11-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DB34_00755 1ef5507a0d4869933703d2897976aa3c 643 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 321 531 7.5E-43 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB34_00755 1ef5507a0d4869933703d2897976aa3c 643 Gene3D G3DSA:3.30.54.20 130 186 8.0E-63 T 11-10-2018 DB34_00755 1ef5507a0d4869933703d2897976aa3c 643 SUPERFAMILY SSF55186 63 241 2.62E-61 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 DB34_00755 1ef5507a0d4869933703d2897976aa3c 643 SUPERFAMILY SSF81271 3 61 1.11E-12 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 DB34_00755 1ef5507a0d4869933703d2897976aa3c 643 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 636 33.456 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DB34_00755 1ef5507a0d4869933703d2897976aa3c 643 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 633 4.6E-212 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DB34_00755 1ef5507a0d4869933703d2897976aa3c 643 SMART SM00863 169 219 2.5E-23 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 DB34_00755 1ef5507a0d4869933703d2897976aa3c 643 SUPERFAMILY SSF55681 243 528 1.31E-100 T 11-10-2018 DB34_00755 1ef5507a0d4869933703d2897976aa3c 643 SUPERFAMILY SSF52954 532 633 4.83E-29 T 11-10-2018 DB34_00755 1ef5507a0d4869933703d2897976aa3c 643 Gene3D G3DSA:3.10.20.30 3 62 2.1E-18 T 11-10-2018 IPR012675 Beta-grasp domain superfamily DB34_00755 1ef5507a0d4869933703d2897976aa3c 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 364 387 1.0E-53 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DB34_00755 1ef5507a0d4869933703d2897976aa3c 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 331 359 1.0E-53 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DB34_00755 1ef5507a0d4869933703d2897976aa3c 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 509 522 1.0E-53 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DB34_00755 1ef5507a0d4869933703d2897976aa3c 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 466 494 1.0E-53 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DB34_00755 1ef5507a0d4869933703d2897976aa3c 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 536 548 1.0E-53 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DB34_00755 1ef5507a0d4869933703d2897976aa3c 643 Pfam PF02824 TGS domain 4 61 6.4E-5 T 11-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 DB34_00755 1ef5507a0d4869933703d2897976aa3c 643 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 169 219 8.5E-12 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 DB34_00755 1ef5507a0d4869933703d2897976aa3c 643 Gene3D G3DSA:3.30.980.10 69 222 8.0E-63 T 11-10-2018 DB34_00755 1ef5507a0d4869933703d2897976aa3c 643 Pfam PF03129 Anticodon binding domain 543 632 1.7E-19 T 11-10-2018 IPR004154 Anticodon-binding DB34_00755 1ef5507a0d4869933703d2897976aa3c 643 Gene3D G3DSA:3.30.930.10 223 533 3.8E-124 T 11-10-2018 DB34_00755 1ef5507a0d4869933703d2897976aa3c 643 Gene3D G3DSA:3.40.50.800 534 641 1.1E-26 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily DB34_12470 301391b89034b0bf5789089cfa3bd62c 694 Pfam PF03764 Elongation factor G, domain IV 481 599 4.5E-44 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 DB34_12470 301391b89034b0bf5789089cfa3bd62c 694 Pfam PF00679 Elongation factor G C-terminus 602 688 3.0E-31 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like DB34_12470 301391b89034b0bf5789089cfa3bd62c 694 SMART SM00889 482 600 5.9E-66 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 DB34_12470 301391b89034b0bf5789089cfa3bd62c 694 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site DB34_12470 301391b89034b0bf5789089cfa3bd62c 694 Hamap MF_00054_B Elongation factor G [fusA]. 6 693 108.506 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DB34_12470 301391b89034b0bf5789089cfa3bd62c 694 Gene3D G3DSA:3.30.70.240 606 676 1.5E-89 T 11-10-2018 DB34_12470 301391b89034b0bf5789089cfa3bd62c 694 SMART SM00838 602 689 6.1E-52 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like DB34_12470 301391b89034b0bf5789089cfa3bd62c 694 SUPERFAMILY SSF54211 481 601 1.57E-42 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DB34_12470 301391b89034b0bf5789089cfa3bd62c 694 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 179 1.7E-28 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DB34_12470 301391b89034b0bf5789089cfa3bd62c 694 Pfam PF00009 Elongation factor Tu GTP binding domain 9 280 1.9E-64 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB34_12470 301391b89034b0bf5789089cfa3bd62c 694 SUPERFAMILY SSF54980 404 482 2.3E-22 T 11-10-2018 IPR035647 EF-G domain III/V-like DB34_12470 301391b89034b0bf5789089cfa3bd62c 694 SUPERFAMILY SSF52540 6 280 3.49E-104 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_12470 301391b89034b0bf5789089cfa3bd62c 694 PRINTS PR00315 GTP-binding elongation factor signature 58 66 2.4E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB34_12470 301391b89034b0bf5789089cfa3bd62c 694 PRINTS PR00315 GTP-binding elongation factor signature 130 139 2.4E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB34_12470 301391b89034b0bf5789089cfa3bd62c 694 PRINTS PR00315 GTP-binding elongation factor signature 94 105 2.4E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB34_12470 301391b89034b0bf5789089cfa3bd62c 694 PRINTS PR00315 GTP-binding elongation factor signature 12 25 2.4E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB34_12470 301391b89034b0bf5789089cfa3bd62c 694 PRINTS PR00315 GTP-binding elongation factor signature 78 88 2.4E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB34_12470 301391b89034b0bf5789089cfa3bd62c 694 Pfam PF14492 Elongation Factor G, domain II 406 479 8.3E-31 T 11-10-2018 DB34_12470 301391b89034b0bf5789089cfa3bd62c 694 Gene3D G3DSA:2.40.30.10 294 413 7.8E-43 T 11-10-2018 DB34_12470 301391b89034b0bf5789089cfa3bd62c 694 Gene3D G3DSA:3.30.230.10 486 689 1.5E-89 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DB34_12470 301391b89034b0bf5789089cfa3bd62c 694 TIGRFAM TIGR00484 EF-G: translation elongation factor G 3 693 0.0 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DB34_12470 301391b89034b0bf5789089cfa3bd62c 694 SUPERFAMILY SSF50447 264 406 4.86E-35 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DB34_12470 301391b89034b0bf5789089cfa3bd62c 694 Pfam PF03144 Elongation factor Tu domain 2 326 393 4.4E-19 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 DB34_12470 301391b89034b0bf5789089cfa3bd62c 694 Gene3D G3DSA:3.30.70.870 414 485 4.0E-30 T 11-10-2018 DB34_12470 301391b89034b0bf5789089cfa3bd62c 694 SUPERFAMILY SSF54980 605 691 8.99E-31 T 11-10-2018 IPR035647 EF-G domain III/V-like DB34_12470 301391b89034b0bf5789089cfa3bd62c 694 Gene3D G3DSA:3.40.50.300 1 286 4.0E-109 T 11-10-2018 DB34_02850 0710334d36a8191ff858056fc7f8cb90 178 Pfam PF04386 Stringent starvation protein B 27 157 5.4E-43 T 11-10-2018 IPR007481 Stringent starvation protein B DB34_02850 0710334d36a8191ff858056fc7f8cb90 178 Gene3D G3DSA:2.30.30.220 9 135 3.7E-46 T 11-10-2018 IPR036760 SspB-like superfamily DB34_02850 0710334d36a8191ff858056fc7f8cb90 178 SUPERFAMILY SSF101738 18 132 5.3E-39 T 11-10-2018 IPR036760 SspB-like superfamily DB34_07930 1661ed1b00fc21cd215c4922ad40eb03 468 SUPERFAMILY SSF48163 301 465 1.96E-36 T 11-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 DB34_07930 1661ed1b00fc21cd215c4922ad40eb03 468 Gene3D G3DSA:3.40.50.620 2 316 4.4E-130 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DB34_07930 1661ed1b00fc21cd215c4922ad40eb03 468 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 4 305 2.8E-98 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 DB34_07930 1661ed1b00fc21cd215c4922ad40eb03 468 PRINTS PR00987 Glutamyl-tRNA synthetase signature 7 19 2.2E-26 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DB34_07930 1661ed1b00fc21cd215c4922ad40eb03 468 PRINTS PR00987 Glutamyl-tRNA synthetase signature 197 205 2.2E-26 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DB34_07930 1661ed1b00fc21cd215c4922ad40eb03 468 PRINTS PR00987 Glutamyl-tRNA synthetase signature 36 49 2.2E-26 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DB34_07930 1661ed1b00fc21cd215c4922ad40eb03 468 PRINTS PR00987 Glutamyl-tRNA synthetase signature 21 32 2.2E-26 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DB34_07930 1661ed1b00fc21cd215c4922ad40eb03 468 PRINTS PR00987 Glutamyl-tRNA synthetase signature 181 191 2.2E-26 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DB34_07930 1661ed1b00fc21cd215c4922ad40eb03 468 Gene3D G3DSA:1.10.10.350 377 467 5.8E-24 T 11-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 DB34_07930 1661ed1b00fc21cd215c4922ad40eb03 468 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 3 466 30.914 T 11-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 DB34_07930 1661ed1b00fc21cd215c4922ad40eb03 468 SUPERFAMILY SSF52374 4 298 9.38E-111 T 11-10-2018 DB34_07930 1661ed1b00fc21cd215c4922ad40eb03 468 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 4 463 9.3E-160 T 11-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 DB34_07930 1661ed1b00fc21cd215c4922ad40eb03 468 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 10 21 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB34_12310 af9ac0deec27bd4777c34f04879a50c7 342 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 12 332 25.482 T 11-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_12310 af9ac0deec27bd4777c34f04879a50c7 342 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 213 226 - T 11-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_12310 af9ac0deec27bd4777c34f04879a50c7 342 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 58 73 - T 11-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_12310 af9ac0deec27bd4777c34f04879a50c7 342 Pfam PF00146 NADH dehydrogenase 20 325 3.2E-130 T 11-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_01960 faf2d7684dcc8504cf53829e002925d6 365 SUPERFAMILY SSF100950 4 353 1.05E-113 T 11-10-2018 IPR037171 NagB/RpiA transferase-like DB34_01960 faf2d7684dcc8504cf53829e002925d6 365 Gene3D G3DSA:3.40.50.10470 192 360 9.0E-52 T 11-10-2018 DB34_01960 faf2d7684dcc8504cf53829e002925d6 365 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 7 361 36.999 T 11-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 DB34_01960 faf2d7684dcc8504cf53829e002925d6 365 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 20 350 1.3E-129 T 11-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 DB34_01960 faf2d7684dcc8504cf53829e002925d6 365 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 39 349 5.4E-98 T 11-10-2018 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 DB34_01960 faf2d7684dcc8504cf53829e002925d6 365 Pfam PF01008 Initiation factor 2 subunit family 52 351 8.6E-65 T 11-10-2018 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 DB34_01960 faf2d7684dcc8504cf53829e002925d6 365 Gene3D G3DSA:1.20.120.1840 7 191 7.5E-53 T 11-10-2018 DB34_02930 94e8aa53737867cb229bd524ac723cfd 519 SMART SM00062 43 265 2.1E-51 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DB34_02930 94e8aa53737867cb229bd524ac723cfd 519 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 331 511 6.9E-21 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB34_02930 94e8aa53737867cb229bd524ac723cfd 519 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 309 406 3.7E-31 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 DB34_02930 94e8aa53737867cb229bd524ac723cfd 519 SUPERFAMILY SSF161098 310 497 3.53E-43 T 11-10-2018 IPR035906 MetI-like superfamily DB34_02930 94e8aa53737867cb229bd524ac723cfd 519 SUPERFAMILY SSF53850 18 261 4.6E-57 T 11-10-2018 DB34_02930 94e8aa53737867cb229bd524ac723cfd 519 Gene3D G3DSA:3.40.190.10 131 223 4.3E-60 T 11-10-2018 DB34_02930 94e8aa53737867cb229bd524ac723cfd 519 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 52 261 2.9E-54 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DB34_02930 94e8aa53737867cb229bd524ac723cfd 519 Gene3D G3DSA:3.40.190.10 54 257 4.3E-60 T 11-10-2018 DB34_02930 94e8aa53737867cb229bd524ac723cfd 519 Gene3D G3DSA:1.10.3720.10 300 515 6.7E-55 T 11-10-2018 IPR035906 MetI-like superfamily DB34_02930 94e8aa53737867cb229bd524ac723cfd 519 SMART SM00079 51 266 0.0014 T 11-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 DB34_09045 399ecdceb2f89f858f764a41867002cd 196 SUPERFAMILY SSF141259 30 102 2.09E-13 T 11-10-2018 IPR036101 CarD-like/TRCF domain superfamily DB34_09045 399ecdceb2f89f858f764a41867002cd 196 SMART SM01058 37 147 3.7E-27 T 11-10-2018 IPR003711 CarD-like/TRCF domain DB34_09045 399ecdceb2f89f858f764a41867002cd 196 Gene3D G3DSA:1.20.58.1290 99 194 8.0E-23 T 11-10-2018 DB34_09045 399ecdceb2f89f858f764a41867002cd 196 Pfam PF02559 CarD-like/TRCF domain 38 146 3.9E-15 T 11-10-2018 IPR003711 CarD-like/TRCF domain DB34_09045 399ecdceb2f89f858f764a41867002cd 196 Gene3D G3DSA:2.30.30.840 28 98 2.9E-20 T 11-10-2018 DB34_03570 8bc4576cbfb223595fce748c58032ec9 156 SUPERFAMILY SSF52540 24 143 4.74E-15 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_03570 8bc4576cbfb223595fce748c58032ec9 156 Gene3D G3DSA:3.40.50.300 2 148 2.1E-35 T 11-10-2018 DB34_03570 8bc4576cbfb223595fce748c58032ec9 156 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 7 138 4.5E-28 T 11-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 DB34_03570 8bc4576cbfb223595fce748c58032ec9 156 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 8 127 3.6E-32 T 11-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 DB34_03240 5e35fe25315d0809300a9ddb7fa27e24 357 SUPERFAMILY SSF55811 222 347 8.31E-19 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DB34_03240 5e35fe25315d0809300a9ddb7fa27e24 357 Gene3D G3DSA:1.10.340.30 19 132 4.2E-80 T 11-10-2018 DB34_03240 5e35fe25315d0809300a9ddb7fa27e24 357 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 7 269 4.8E-88 T 11-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 DB34_03240 5e35fe25315d0809300a9ddb7fa27e24 357 Pfam PF00633 Helix-hairpin-helix motif 102 128 1.3E-6 T 11-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 DB34_03240 5e35fe25315d0809300a9ddb7fa27e24 357 Gene3D G3DSA:3.90.79.10 227 350 1.4E-14 T 11-10-2018 DB34_03240 5e35fe25315d0809300a9ddb7fa27e24 357 SUPERFAMILY SSF48150 7 224 1.27E-66 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 DB34_03240 5e35fe25315d0809300a9ddb7fa27e24 357 Pfam PF14815 NUDIX domain 236 346 5.7E-20 T 11-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 DB34_03240 5e35fe25315d0809300a9ddb7fa27e24 357 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 11-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 DB34_03240 5e35fe25315d0809300a9ddb7fa27e24 357 SMART SM00478 41 192 4.1E-42 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 DB34_03240 5e35fe25315d0809300a9ddb7fa27e24 357 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 38 164 4.4E-21 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 DB34_03240 5e35fe25315d0809300a9ddb7fa27e24 357 Gene3D G3DSA:1.10.1670.10 8 215 4.2E-80 T 11-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 DB34_04650 cecaffa02eb904ad047c4a544bd93cb8 201 Pfam PF07750 GcrA cell cycle regulator 1 197 7.6E-32 T 11-10-2018 IPR011681 GcrA cell cycle regulator DB34_04650 cecaffa02eb904ad047c4a544bd93cb8 201 Gene3D G3DSA:1.10.10.60 2 45 4.0E-8 T 11-10-2018 DB34_02875 d16f56dbb814409a8d8f128fe846c2eb 368 SUPERFAMILY SSF51419 13 239 1.44E-60 T 11-10-2018 IPR029066 PLP-binding barrel DB34_02875 d16f56dbb814409a8d8f128fe846c2eb 368 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 36 46 - T 11-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DB34_02875 d16f56dbb814409a8d8f128fe846c2eb 368 PRINTS PR00992 Alanine racemase signature 255 270 1.9E-41 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DB34_02875 d16f56dbb814409a8d8f128fe846c2eb 368 PRINTS PR00992 Alanine racemase signature 272 287 1.9E-41 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DB34_02875 d16f56dbb814409a8d8f128fe846c2eb 368 PRINTS PR00992 Alanine racemase signature 163 174 1.9E-41 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DB34_02875 d16f56dbb814409a8d8f128fe846c2eb 368 PRINTS PR00992 Alanine racemase signature 347 360 1.9E-41 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DB34_02875 d16f56dbb814409a8d8f128fe846c2eb 368 PRINTS PR00992 Alanine racemase signature 129 141 1.9E-41 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DB34_02875 d16f56dbb814409a8d8f128fe846c2eb 368 PRINTS PR00992 Alanine racemase signature 293 310 1.9E-41 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DB34_02875 d16f56dbb814409a8d8f128fe846c2eb 368 PRINTS PR00992 Alanine racemase signature 31 47 1.9E-41 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DB34_02875 d16f56dbb814409a8d8f128fe846c2eb 368 PRINTS PR00992 Alanine racemase signature 201 228 1.9E-41 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DB34_02875 d16f56dbb814409a8d8f128fe846c2eb 368 TIGRFAM TIGR00492 alr: alanine racemase 9 364 2.1E-77 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DB34_02875 d16f56dbb814409a8d8f128fe846c2eb 368 SUPERFAMILY SSF50621 233 365 9.07E-41 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DB34_02875 d16f56dbb814409a8d8f128fe846c2eb 368 Pfam PF00842 Alanine racemase, C-terminal domain 239 364 7.5E-35 T 11-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DB34_02875 d16f56dbb814409a8d8f128fe846c2eb 368 Gene3D G3DSA:3.20.20.10 15 226 8.3E-112 T 11-10-2018 IPR029066 PLP-binding barrel DB34_02875 d16f56dbb814409a8d8f128fe846c2eb 368 Gene3D G3DSA:2.40.37.10 14 364 8.3E-112 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DB34_02875 d16f56dbb814409a8d8f128fe846c2eb 368 SMART SM01005 239 365 2.3E-48 T 11-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DB34_02875 d16f56dbb814409a8d8f128fe846c2eb 368 Pfam PF01168 Alanine racemase, N-terminal domain 13 228 4.3E-59 T 11-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DB34_02875 d16f56dbb814409a8d8f128fe846c2eb 368 Hamap MF_01201 Alanine racemase. 6 365 29.371 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DB34_10755 0de66dc30be93c52d2519608bcf6cae4 541 Pfam PF01593 Flavin containing amine oxidoreductase 73 533 1.1E-51 T 11-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 DB34_10755 0de66dc30be93c52d2519608bcf6cae4 541 Gene3D G3DSA:3.50.50.60 65 531 3.8E-158 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_10755 0de66dc30be93c52d2519608bcf6cae4 541 Gene3D G3DSA:3.90.660.10 103 479 3.8E-158 T 11-10-2018 DB34_10755 0de66dc30be93c52d2519608bcf6cae4 541 Gene3D G3DSA:1.20.1440.240 179 284 3.8E-158 T 11-10-2018 DB34_10755 0de66dc30be93c52d2519608bcf6cae4 541 SUPERFAMILY SSF51905 61 536 2.42E-45 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_10755 0de66dc30be93c52d2519608bcf6cae4 541 SUPERFAMILY SSF54373 374 484 8.5E-27 T 11-10-2018 DB34_12395 b9550b3c9cfee65ff281ab97536e81db 491 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 12 204 3.8E-39 T 11-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 DB34_12395 b9550b3c9cfee65ff281ab97536e81db 491 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 11 203 22.449 T 11-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 DB34_12395 b9550b3c9cfee65ff281ab97536e81db 491 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 216 487 15.225 T 11-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 DB34_12395 b9550b3c9cfee65ff281ab97536e81db 491 SUPERFAMILY SSF53613 221 451 3.74E-47 T 11-10-2018 IPR029056 Ribokinase-like DB34_12395 b9550b3c9cfee65ff281ab97536e81db 491 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 413 423 - T 11-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site DB34_12395 b9550b3c9cfee65ff281ab97536e81db 491 PIRSF PIRSF017184 9 459 5.5E-96 T 11-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 DB34_12395 b9550b3c9cfee65ff281ab97536e81db 491 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 225 450 1.0E-45 T 11-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 DB34_12395 b9550b3c9cfee65ff281ab97536e81db 491 Pfam PF03853 YjeF-related protein N-terminus 32 182 4.2E-33 T 11-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 DB34_12395 b9550b3c9cfee65ff281ab97536e81db 491 Gene3D G3DSA:3.40.1190.20 222 484 6.6E-56 T 11-10-2018 IPR029056 Ribokinase-like DB34_12395 b9550b3c9cfee65ff281ab97536e81db 491 Gene3D G3DSA:3.40.50.10260 8 210 3.9E-55 T 11-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 DB34_12395 b9550b3c9cfee65ff281ab97536e81db 491 SUPERFAMILY SSF64153 10 237 2.09E-56 T 11-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 DB34_12395 b9550b3c9cfee65ff281ab97536e81db 491 Pfam PF01256 Carbohydrate kinase 241 451 2.0E-43 T 11-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 DB34_04535 b920d4b7bceb77daf41a83d66e7f5520 454 SUPERFAMILY SSF51338 15 437 8.65E-32 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DB34_04535 b920d4b7bceb77daf41a83d66e7f5520 454 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 30 433 6.3E-90 T 11-10-2018 DB34_04535 b920d4b7bceb77daf41a83d66e7f5520 454 Pfam PF01979 Amidohydrolase family 61 429 6.6E-26 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 DB34_04535 b920d4b7bceb77daf41a83d66e7f5520 454 SUPERFAMILY SSF51556 65 376 4.64E-88 T 11-10-2018 IPR032466 Metal-dependent hydrolase DB34_04535 b920d4b7bceb77daf41a83d66e7f5520 454 Gene3D G3DSA:3.20.20.140 10 433 3.1E-122 T 11-10-2018 DB34_04535 b920d4b7bceb77daf41a83d66e7f5520 454 ProSitePatterns PS00483 Dihydroorotase signature 2. 311 322 - T 11-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DB34_01835 6aac1f821318c110876a1a8823f4c284 398 Pfam PF07690 Major Facilitator Superfamily 17 348 2.0E-29 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DB34_01835 6aac1f821318c110876a1a8823f4c284 398 Gene3D G3DSA:1.20.1250.20 7 383 3.6E-40 T 11-10-2018 DB34_01835 6aac1f821318c110876a1a8823f4c284 398 SUPERFAMILY SSF103473 9 382 4.05E-47 T 11-10-2018 IPR036259 MFS transporter superfamily DB34_00820 8221c52591847a5b2f89c0d678b11f06 1518 Gene3D G3DSA:3.20.20.70 514 1209 0.0 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB34_00820 8221c52591847a5b2f89c0d678b11f06 1518 Pfam PF04898 Glutamate synthase central domain 488 769 8.2E-98 T 11-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 DB34_00820 8221c52591847a5b2f89c0d678b11f06 1518 SUPERFAMILY SSF69336 1244 1506 4.97E-90 T 11-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 DB34_00820 8221c52591847a5b2f89c0d678b11f06 1518 Gene3D G3DSA:3.60.20.10 42 576 0.0 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DB34_00820 8221c52591847a5b2f89c0d678b11f06 1518 Pfam PF01645 Conserved region in glutamate synthase 833 1195 1.1E-152 T 11-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 DB34_00820 8221c52591847a5b2f89c0d678b11f06 1518 Pfam PF00310 Glutamine amidotransferases class-II 42 459 4.5E-149 T 11-10-2018 IPR017932 Glutamine amidotransferase type 2 domain DB34_00820 8221c52591847a5b2f89c0d678b11f06 1518 SUPERFAMILY SSF56235 42 461 9.65E-138 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DB34_00820 8221c52591847a5b2f89c0d678b11f06 1518 Gene3D G3DSA:3.20.20.70 464 826 0.0 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB34_00820 8221c52591847a5b2f89c0d678b11f06 1518 Pfam PF01493 GXGXG motif 1272 1460 7.6E-74 T 11-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 DB34_00820 8221c52591847a5b2f89c0d678b11f06 1518 Gene3D G3DSA:2.160.20.60 1245 1516 2.9E-104 T 11-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 DB34_00820 8221c52591847a5b2f89c0d678b11f06 1518 SUPERFAMILY SSF51395 473 1230 8.24E-259 T 11-10-2018 DB34_07830 a1e109f123d7d46d210c28a1b8545be8 971 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 15 959 19.535 T 11-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 DB34_07830 a1e109f123d7d46d210c28a1b8545be8 971 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 40 674 1.5E-184 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB34_07830 a1e109f123d7d46d210c28a1b8545be8 971 SUPERFAMILY SSF47323 686 959 2.18E-55 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB34_07830 a1e109f123d7d46d210c28a1b8545be8 971 Pfam PF08264 Anticodon-binding domain of tRNA 718 871 8.9E-19 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 DB34_07830 a1e109f123d7d46d210c28a1b8545be8 971 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 71 82 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB34_07830 a1e109f123d7d46d210c28a1b8545be8 971 SUPERFAMILY SSF52374 17 681 7.15E-131 T 11-10-2018 DB34_07830 a1e109f123d7d46d210c28a1b8545be8 971 Gene3D G3DSA:3.90.740.10 211 442 3.0E-221 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 DB34_07830 a1e109f123d7d46d210c28a1b8545be8 971 Gene3D G3DSA:3.40.50.620 38 663 3.0E-221 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DB34_07830 a1e109f123d7d46d210c28a1b8545be8 971 Gene3D G3DSA:1.10.730.20 674 961 2.8E-77 T 11-10-2018 DB34_07830 a1e109f123d7d46d210c28a1b8545be8 971 Pfam PF06827 Zinc finger found in FPG and IleRS 928 957 3.3E-5 T 11-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 DB34_07830 a1e109f123d7d46d210c28a1b8545be8 971 SUPERFAMILY SSF50677 219 412 4.97E-44 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 DB34_07830 a1e109f123d7d46d210c28a1b8545be8 971 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 562 575 8.3E-30 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 DB34_07830 a1e109f123d7d46d210c28a1b8545be8 971 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 248 271 8.3E-30 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 DB34_07830 a1e109f123d7d46d210c28a1b8545be8 971 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 595 604 8.3E-30 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 DB34_07830 a1e109f123d7d46d210c28a1b8545be8 971 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 64 75 8.3E-30 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 DB34_07830 a1e109f123d7d46d210c28a1b8545be8 971 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 435 450 8.3E-30 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 DB34_07830 a1e109f123d7d46d210c28a1b8545be8 971 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 28 872 7.4E-247 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 DB34_04000 b11cf380aa6e0109d468d380a0a98c16 402 SUPERFAMILY SSF56349 101 390 1.24E-49 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DB34_04000 b11cf380aa6e0109d468d380a0a98c16 402 Pfam PF00589 Phage integrase family 240 377 9.5E-13 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 DB34_04000 b11cf380aa6e0109d468d380a0a98c16 402 Gene3D G3DSA:1.10.150.130 105 185 1.3E-29 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal DB34_04000 b11cf380aa6e0109d468d380a0a98c16 402 Gene3D G3DSA:1.10.443.10 218 392 7.9E-15 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 DB34_04000 b11cf380aa6e0109d468d380a0a98c16 402 Gene3D G3DSA:3.30.160.390 8 104 1.1E-15 T 11-10-2018 IPR038488 Integrase, DNA-binding domain superfamily DB34_04000 b11cf380aa6e0109d468d380a0a98c16 402 Pfam PF13356 Arm DNA-binding domain 9 90 9.6E-12 T 11-10-2018 IPR025166 Integrase, DNA-binding domain DB34_01075 973147bf90ea12f8f112103413582ffd 146 Pfam PF02472 Biopolymer transport protein ExbD/TolR 15 139 4.3E-22 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 DB34_04365 973147bf90ea12f8f112103413582ffd 146 Pfam PF02472 Biopolymer transport protein ExbD/TolR 15 139 4.3E-22 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 DB34_10475 973147bf90ea12f8f112103413582ffd 146 Pfam PF02472 Biopolymer transport protein ExbD/TolR 15 139 4.3E-22 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 DB34_12625 ae7410e962efed1168005a30514021cf 106 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 3 94 5.4E-37 T 11-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 DB34_12625 ae7410e962efed1168005a30514021cf 106 SMART SM00411 4 93 4.9E-32 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DB34_12625 ae7410e962efed1168005a30514021cf 106 PRINTS PR01727 Prokaryotic integration host factor signature 43 58 1.4E-13 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DB34_12625 ae7410e962efed1168005a30514021cf 106 PRINTS PR01727 Prokaryotic integration host factor signature 61 74 1.4E-13 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DB34_12625 ae7410e962efed1168005a30514021cf 106 PRINTS PR01727 Prokaryotic integration host factor signature 77 91 1.4E-13 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DB34_12625 ae7410e962efed1168005a30514021cf 106 Pfam PF00216 Bacterial DNA-binding protein 4 93 7.5E-29 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DB34_12625 ae7410e962efed1168005a30514021cf 106 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 49 68 - T 11-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 DB34_12625 ae7410e962efed1168005a30514021cf 106 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 2 98 26.088 T 11-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 DB34_12625 ae7410e962efed1168005a30514021cf 106 SUPERFAMILY SSF47729 4 94 3.39E-27 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 DB34_12625 ae7410e962efed1168005a30514021cf 106 Gene3D G3DSA:4.10.520.10 2 99 1.2E-30 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 DB34_01620 7b7f95688a8faed744161f199fc4bcc3 240 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 235 1.0E-83 T 11-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 DB34_01620 7b7f95688a8faed744161f199fc4bcc3 240 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 239 118.939 T 11-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 DB34_01620 7b7f95688a8faed744161f199fc4bcc3 240 SUPERFAMILY SSF63892 5 236 3.27E-93 T 11-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 DB34_01620 7b7f95688a8faed744161f199fc4bcc3 240 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 233 1.0E-96 T 11-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 DB34_01620 7b7f95688a8faed744161f199fc4bcc3 240 Gene3D G3DSA:3.20.20.70 1 240 6.2E-99 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB34_08295 62996a67027dddc9af71365e543bf4cd 482 PRINTS PR00145 Argininosuccinate lyase family signature 159 179 3.1E-65 T 11-10-2018 DB34_08295 62996a67027dddc9af71365e543bf4cd 482 PRINTS PR00145 Argininosuccinate lyase family signature 118 140 3.1E-65 T 11-10-2018 DB34_08295 62996a67027dddc9af71365e543bf4cd 482 PRINTS PR00145 Argininosuccinate lyase family signature 210 226 3.1E-65 T 11-10-2018 DB34_08295 62996a67027dddc9af71365e543bf4cd 482 PRINTS PR00145 Argininosuccinate lyase family signature 292 308 3.1E-65 T 11-10-2018 DB34_08295 62996a67027dddc9af71365e543bf4cd 482 PRINTS PR00145 Argininosuccinate lyase family signature 248 272 3.1E-65 T 11-10-2018 DB34_08295 62996a67027dddc9af71365e543bf4cd 482 PRINTS PR00145 Argininosuccinate lyase family signature 327 346 3.1E-65 T 11-10-2018 DB34_08295 62996a67027dddc9af71365e543bf4cd 482 TIGRFAM TIGR00838 argH: argininosuccinate lyase 21 465 7.2E-180 T 11-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DB34_08295 62996a67027dddc9af71365e543bf4cd 482 SUPERFAMILY SSF48557 23 474 5.65E-147 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 DB34_08295 62996a67027dddc9af71365e543bf4cd 482 Pfam PF00206 Lyase 23 317 1.1E-78 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal DB34_08295 62996a67027dddc9af71365e543bf4cd 482 Hamap MF_00006 Argininosuccinate lyase [argH]. 19 471 41.723 T 11-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DB34_08295 62996a67027dddc9af71365e543bf4cd 482 Gene3D G3DSA:1.10.275.10 42 246 5.1E-187 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal DB34_08295 62996a67027dddc9af71365e543bf4cd 482 Gene3D G3DSA:1.20.200.10 136 465 5.1E-187 T 11-10-2018 DB34_08295 62996a67027dddc9af71365e543bf4cd 482 Gene3D G3DSA:1.10.40.30 377 450 5.1E-187 T 11-10-2018 DB34_08295 62996a67027dddc9af71365e543bf4cd 482 PRINTS PR00149 Fumarate lyase superfamily signature 119 137 8.5E-31 T 11-10-2018 IPR000362 Fumarate lyase family DB34_08295 62996a67027dddc9af71365e543bf4cd 482 PRINTS PR00149 Fumarate lyase superfamily signature 248 275 8.5E-31 T 11-10-2018 IPR000362 Fumarate lyase family DB34_08295 62996a67027dddc9af71365e543bf4cd 482 PRINTS PR00149 Fumarate lyase superfamily signature 164 182 8.5E-31 T 11-10-2018 IPR000362 Fumarate lyase family DB34_08295 62996a67027dddc9af71365e543bf4cd 482 PRINTS PR00149 Fumarate lyase superfamily signature 292 308 8.5E-31 T 11-10-2018 IPR000362 Fumarate lyase family DB34_08295 62996a67027dddc9af71365e543bf4cd 482 Pfam PF14698 Argininosuccinate lyase C-terminal 380 449 2.2E-23 T 11-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DB34_08295 62996a67027dddc9af71365e543bf4cd 482 ProSitePatterns PS00163 Fumarate lyases signature. 292 301 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 DB34_00375 f6738c270e8329814be0072ea1f0a172 489 Gene3D G3DSA:3.40.1390.10 5 100 8.9E-21 T 11-10-2018 DB34_00375 f6738c270e8329814be0072ea1f0a172 489 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 21 484 8.5E-132 T 11-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 DB34_00375 f6738c270e8329814be0072ea1f0a172 489 SUPERFAMILY SSF53244 336 483 4.12E-42 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DB34_00375 f6738c270e8329814be0072ea1f0a172 489 SUPERFAMILY SSF63418 3 98 7.06E-21 T 11-10-2018 IPR035911 MurE/MurF, N-terminal DB34_00375 f6738c270e8329814be0072ea1f0a172 489 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 3 486 29.828 T 11-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 DB34_00375 f6738c270e8329814be0072ea1f0a172 489 SUPERFAMILY SSF53623 101 335 5.04E-59 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DB34_00375 f6738c270e8329814be0072ea1f0a172 489 Gene3D G3DSA:3.90.190.20 346 488 2.4E-50 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DB34_00375 f6738c270e8329814be0072ea1f0a172 489 Gene3D G3DSA:3.40.1190.10 101 339 6.3E-56 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DB34_00375 f6738c270e8329814be0072ea1f0a172 489 Pfam PF08245 Mur ligase middle domain 109 316 4.2E-40 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 DB34_00375 f6738c270e8329814be0072ea1f0a172 489 Pfam PF02875 Mur ligase family, glutamate ligase domain 336 421 1.5E-15 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 DB34_00375 f6738c270e8329814be0072ea1f0a172 489 Pfam PF01225 Mur ligase family, catalytic domain 22 71 1.2E-9 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 DB34_03775 c1f4baff4c40aa4a103cdafbae5c8501 198 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 64 77 - T 11-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 DB34_03775 c1f4baff4c40aa4a103cdafbae5c8501 198 SUPERFAMILY SSF54211 90 182 1.13E-34 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DB34_03775 c1f4baff4c40aa4a103cdafbae5c8501 198 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 34 177 1.4E-65 T 11-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 DB34_03775 c1f4baff4c40aa4a103cdafbae5c8501 198 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 5 198 43.805 T 11-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 DB34_03775 c1f4baff4c40aa4a103cdafbae5c8501 198 Gene3D G3DSA:3.30.230.40 1 92 1.1E-38 T 11-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 DB34_03775 c1f4baff4c40aa4a103cdafbae5c8501 198 Gene3D G3DSA:3.30.230.40 93 198 2.6E-40 T 11-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 DB34_03775 c1f4baff4c40aa4a103cdafbae5c8501 198 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 159 171 - T 11-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 DB34_03775 c1f4baff4c40aa4a103cdafbae5c8501 198 SUPERFAMILY SSF54211 5 89 4.17E-33 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DB34_01180 354ee413cb1147955cc21312e313cb8e 542 Gene3D G3DSA:3.40.50.2000 15 486 3.1E-154 T 11-10-2018 DB34_01180 354ee413cb1147955cc21312e313cb8e 542 Gene3D G3DSA:3.40.50.2000 261 472 3.1E-154 T 11-10-2018 DB34_01180 354ee413cb1147955cc21312e313cb8e 542 Hamap MF_00484 Glycogen synthase [glgA]. 13 488 41.089 T 11-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 DB34_01180 354ee413cb1147955cc21312e313cb8e 542 SUPERFAMILY SSF53756 8 498 8.48E-104 T 11-10-2018 DB34_01180 354ee413cb1147955cc21312e313cb8e 542 Pfam PF00534 Glycosyl transferases group 1 305 451 4.9E-13 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 DB34_01180 354ee413cb1147955cc21312e313cb8e 542 Pfam PF08323 Starch synthase catalytic domain 14 247 1.2E-64 T 11-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 DB34_01180 354ee413cb1147955cc21312e313cb8e 542 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 14 488 2.6E-148 T 11-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 DB34_13435 ee8433b9f9f43c240d058bc97f60b7c0 546 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 528 2.0E-267 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DB34_13435 ee8433b9f9f43c240d058bc97f60b7c0 546 SUPERFAMILY SSF48592 7 522 2.91E-79 T 11-10-2018 IPR027413 GroEL-like equatorial domain superfamily DB34_13435 ee8433b9f9f43c240d058bc97f60b7c0 546 Gene3D G3DSA:3.50.7.10 173 379 5.0E-242 T 11-10-2018 IPR027409 GroEL-like apical domain superfamily DB34_13435 ee8433b9f9f43c240d058bc97f60b7c0 546 Hamap MF_00600 60 kDa chaperonin [groL]. 2 544 42.369 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DB34_13435 ee8433b9f9f43c240d058bc97f60b7c0 546 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 11-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DB34_13435 ee8433b9f9f43c240d058bc97f60b7c0 546 PRINTS PR00298 60kDa chaperonin signature 83 110 7.4E-75 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DB34_13435 ee8433b9f9f43c240d058bc97f60b7c0 546 PRINTS PR00298 60kDa chaperonin signature 398 419 7.4E-75 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DB34_13435 ee8433b9f9f43c240d058bc97f60b7c0 546 PRINTS PR00298 60kDa chaperonin signature 268 291 7.4E-75 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DB34_13435 ee8433b9f9f43c240d058bc97f60b7c0 546 PRINTS PR00298 60kDa chaperonin signature 350 375 7.4E-75 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DB34_13435 ee8433b9f9f43c240d058bc97f60b7c0 546 PRINTS PR00298 60kDa chaperonin signature 27 53 7.4E-75 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DB34_13435 ee8433b9f9f43c240d058bc97f60b7c0 546 Gene3D G3DSA:1.10.560.10 8 522 5.0E-242 T 11-10-2018 IPR027413 GroEL-like equatorial domain superfamily DB34_13435 ee8433b9f9f43c240d058bc97f60b7c0 546 SUPERFAMILY SSF54849 138 204 7.33E-23 T 11-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily DB34_13435 ee8433b9f9f43c240d058bc97f60b7c0 546 SUPERFAMILY SSF52029 184 376 3.74E-86 T 11-10-2018 IPR027409 GroEL-like apical domain superfamily DB34_13435 ee8433b9f9f43c240d058bc97f60b7c0 546 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 525 5.7E-98 T 11-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 DB34_13435 ee8433b9f9f43c240d058bc97f60b7c0 546 Gene3D G3DSA:3.30.260.10 138 410 5.0E-242 T 11-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily DB34_05160 56da9b100eee6b106cf62b8f3dfe2d5f 359 SUPERFAMILY SSF56672 5 237 1.78E-93 T 11-10-2018 DB34_05160 56da9b100eee6b106cf62b8f3dfe2d5f 359 Hamap MF_01113 DNA polymerase IV [dinB]. 5 357 38.934 T 11-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 DB34_05160 56da9b100eee6b106cf62b8f3dfe2d5f 359 Pfam PF00817 impB/mucB/samB family 11 157 9.5E-52 T 11-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 DB34_05160 56da9b100eee6b106cf62b8f3dfe2d5f 359 Pfam PF11799 impB/mucB/samB family C-terminal domain 236 351 1.3E-21 T 11-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 DB34_05160 56da9b100eee6b106cf62b8f3dfe2d5f 359 Gene3D G3DSA:3.30.70.270 119 173 1.1E-21 T 11-10-2018 DB34_05160 56da9b100eee6b106cf62b8f3dfe2d5f 359 Gene3D G3DSA:3.30.70.270 74 118 1.4E-10 T 11-10-2018 DB34_05160 56da9b100eee6b106cf62b8f3dfe2d5f 359 Gene3D G3DSA:2.30.40.20 15 73 2.3E-29 T 11-10-2018 DB34_05160 56da9b100eee6b106cf62b8f3dfe2d5f 359 SUPERFAMILY SSF100879 241 341 4.87E-28 T 11-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 DB34_05160 56da9b100eee6b106cf62b8f3dfe2d5f 359 Gene3D G3DSA:1.10.150.20 174 232 4.8E-17 T 11-10-2018 DB34_05160 56da9b100eee6b106cf62b8f3dfe2d5f 359 Gene3D G3DSA:3.30.1490.100 243 351 5.4E-29 T 11-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 DB34_09305 8481a16957f135da4c1446df61ab804f 289 SUPERFAMILY SSF53681 118 251 1.96E-21 T 11-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DB34_09305 8481a16957f135da4c1446df61ab804f 289 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 79 87 - T 11-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DB34_09305 8481a16957f135da4c1446df61ab804f 289 Gene3D G3DSA:3.40.50.1860 105 220 3.6E-68 T 11-10-2018 DB34_09305 8481a16957f135da4c1446df61ab804f 289 Hamap MF_00258 Glutamate racemase [murI]. 12 275 26.279 T 11-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DB34_09305 8481a16957f135da4c1446df61ab804f 289 SUPERFAMILY SSF53681 13 116 3.47E-24 T 11-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DB34_09305 8481a16957f135da4c1446df61ab804f 289 Gene3D G3DSA:3.40.50.1860 17 239 3.6E-68 T 11-10-2018 DB34_09305 8481a16957f135da4c1446df61ab804f 289 Pfam PF01177 Asp/Glu/Hydantoin racemase 19 228 1.7E-16 T 11-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DB34_05270 8295f01074684ac25d427889ed4592b3 781 Gene3D G3DSA:1.10.1780.10 1 142 4.8E-38 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 DB34_05270 8295f01074684ac25d427889ed4592b3 781 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 665 745 1.7E-23 T 11-10-2018 IPR019489 Clp ATPase, C-terminal DB34_05270 8295f01074684ac25d427889ed4592b3 781 Gene3D G3DSA:3.40.50.300 167 362 2.3E-63 T 11-10-2018 DB34_05270 8295f01074684ac25d427889ed4592b3 781 SMART SM01086 665 754 2.0E-36 T 11-10-2018 IPR019489 Clp ATPase, C-terminal DB34_05270 8295f01074684ac25d427889ed4592b3 781 Gene3D G3DSA:3.40.50.300 451 664 1.1E-77 T 11-10-2018 DB34_05270 8295f01074684ac25d427889ed4592b3 781 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 574 592 2.7E-36 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 DB34_05270 8295f01074684ac25d427889ed4592b3 781 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 607 621 2.7E-36 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 DB34_05270 8295f01074684ac25d427889ed4592b3 781 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 545 563 2.7E-36 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 DB34_05270 8295f01074684ac25d427889ed4592b3 781 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 503 521 2.7E-36 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 DB34_05270 8295f01074684ac25d427889ed4592b3 781 SUPERFAMILY SSF52540 449 739 3.61E-76 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_05270 8295f01074684ac25d427889ed4592b3 781 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 746 0.0 T 11-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 DB34_05270 8295f01074684ac25d427889ed4592b3 781 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 314 326 - T 11-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 DB34_05270 8295f01074684ac25d427889ed4592b3 781 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 530 548 - T 11-10-2018 IPR028299 ClpA/B, conserved site 2 DB34_05270 8295f01074684ac25d427889ed4592b3 781 SUPERFAMILY SSF52540 179 434 5.7E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_05270 8295f01074684ac25d427889ed4592b3 781 Pfam PF07724 AAA domain (Cdc48 subfamily) 498 659 3.3E-46 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DB34_05270 8295f01074684ac25d427889ed4592b3 781 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 223 354 9.2E-12 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DB34_05270 8295f01074684ac25d427889ed4592b3 781 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 16 60 2.3E-10 T 11-10-2018 IPR004176 Clp, N-terminal DB34_05270 8295f01074684ac25d427889ed4592b3 781 Gene3D G3DSA:1.10.8.60 665 768 4.3E-29 T 11-10-2018 DB34_05270 8295f01074684ac25d427889ed4592b3 781 SMART SM00382 218 364 4.0E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_05270 8295f01074684ac25d427889ed4592b3 781 SMART SM00382 499 662 5.9E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_05270 8295f01074684ac25d427889ed4592b3 781 Gene3D G3DSA:1.10.8.60 363 450 5.0E-33 T 11-10-2018 DB34_05270 8295f01074684ac25d427889ed4592b3 781 SUPERFAMILY SSF81923 1 141 7.06E-56 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 DB34_03390 d968500b425872fd294eecc67fc4ec3e 137 SUPERFAMILY SSF57716 96 134 3.42E-9 T 11-10-2018 DB34_03390 d968500b425872fd294eecc67fc4ec3e 137 Gene3D G3DSA:1.20.120.910 6 137 1.1E-37 T 11-10-2018 DB34_03390 d968500b425872fd294eecc67fc4ec3e 137 SUPERFAMILY SSF109635 2 95 5.36E-31 T 11-10-2018 IPR037187 DksA, N-terminal domain superfamily DB34_03390 d968500b425872fd294eecc67fc4ec3e 137 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 99 123 - T 11-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site DB34_03390 d968500b425872fd294eecc67fc4ec3e 137 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 94 129 5.7E-12 T 11-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 DB34_03390 d968500b425872fd294eecc67fc4ec3e 137 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 13 135 27.224 T 11-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 DB34_03390 d968500b425872fd294eecc67fc4ec3e 137 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 17 125 1.6E-42 T 11-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 DB34_08150 84c2f8a090405d903d526de597e0a5cc 304 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 193 217 - T 11-10-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 DB34_08150 84c2f8a090405d903d526de597e0a5cc 304 PRINTS PR00073 Coprogen oxidase signature 56 72 1.1E-41 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 DB34_08150 84c2f8a090405d903d526de597e0a5cc 304 PRINTS PR00073 Coprogen oxidase signature 289 304 1.1E-41 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 DB34_08150 84c2f8a090405d903d526de597e0a5cc 304 PRINTS PR00073 Coprogen oxidase signature 261 288 1.1E-41 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 DB34_08150 84c2f8a090405d903d526de597e0a5cc 304 PRINTS PR00073 Coprogen oxidase signature 119 143 1.1E-41 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 DB34_08150 84c2f8a090405d903d526de597e0a5cc 304 PRINTS PR00073 Coprogen oxidase signature 189 218 1.1E-41 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 DB34_08150 84c2f8a090405d903d526de597e0a5cc 304 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 13 304 51.579 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 DB34_08150 84c2f8a090405d903d526de597e0a5cc 304 Gene3D G3DSA:3.40.1500.10 5 304 6.4E-101 T 11-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 DB34_08150 84c2f8a090405d903d526de597e0a5cc 304 Pfam PF01218 Coproporphyrinogen III oxidase 21 303 1.2E-89 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 DB34_08150 84c2f8a090405d903d526de597e0a5cc 304 PIRSF PIRSF000166 1 304 1.0E-107 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 DB34_08150 84c2f8a090405d903d526de597e0a5cc 304 SUPERFAMILY SSF102886 12 304 9.81E-109 T 11-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 DB34_12930 2a86f466b163d5378bdf53f02cc33378 609 Gene3D G3DSA:3.90.550.60 16 389 4.0E-89 T 11-10-2018 DB34_12930 2a86f466b163d5378bdf53f02cc33378 609 SUPERFAMILY SSF53448 167 406 4.41E-15 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB34_12930 2a86f466b163d5378bdf53f02cc33378 609 Pfam PF13641 Glycosyltransferase like family 2 167 381 6.2E-7 T 11-10-2018 DB34_08765 073fbd43cbd1fd3ec5370c861a3ead31 353 Gene3D G3DSA:3.40.190.10 35 161 9.4E-18 T 11-10-2018 DB34_08765 073fbd43cbd1fd3ec5370c861a3ead31 353 Pfam PF13379 NMT1-like family 36 250 1.5E-20 T 11-10-2018 DB34_08765 073fbd43cbd1fd3ec5370c861a3ead31 353 SUPERFAMILY SSF53850 37 281 5.14E-25 T 11-10-2018 DB34_08765 073fbd43cbd1fd3ec5370c861a3ead31 353 Gene3D G3DSA:3.40.190.10 162 340 4.8E-15 T 11-10-2018 DB34_03850 31656aa9d41a5584d2e1f2365300d7dc 626 Gene3D G3DSA:3.50.50.60 1 217 1.5E-91 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_03850 31656aa9d41a5584d2e1f2365300d7dc 626 Gene3D G3DSA:3.50.50.60 305 460 1.8E-55 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_03850 31656aa9d41a5584d2e1f2365300d7dc 626 Pfam PF13932 GidA associated domain 404 612 2.8E-64 T 11-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 DB34_03850 31656aa9d41a5584d2e1f2365300d7dc 626 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 271 285 - T 11-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 DB34_03850 31656aa9d41a5584d2e1f2365300d7dc 626 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 3 621 38.904 T 11-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 DB34_03850 31656aa9d41a5584d2e1f2365300d7dc 626 SMART SM01228 543 614 1.4E-29 T 11-10-2018 DB34_03850 31656aa9d41a5584d2e1f2365300d7dc 626 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 5 618 2.7E-234 T 11-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 DB34_03850 31656aa9d41a5584d2e1f2365300d7dc 626 Gene3D G3DSA:1.10.150.570 566 619 2.5E-18 T 11-10-2018 DB34_03850 31656aa9d41a5584d2e1f2365300d7dc 626 Pfam PF01134 Glucose inhibited division protein A 6 400 8.8E-156 T 11-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 DB34_03850 31656aa9d41a5584d2e1f2365300d7dc 626 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 370 393 - T 11-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 DB34_03850 31656aa9d41a5584d2e1f2365300d7dc 626 SUPERFAMILY SSF51905 2 258 1.51E-43 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_10115 ee6e29b284d6db222ba6645fc8796db4 277 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 21 276 1.1E-122 T 11-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 DB34_10115 ee6e29b284d6db222ba6645fc8796db4 277 Gene3D G3DSA:3.20.20.70 10 277 4.2E-104 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB34_10115 ee6e29b284d6db222ba6645fc8796db4 277 Pfam PF00793 DAHP synthetase I family 14 275 8.5E-73 T 11-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 DB34_10115 ee6e29b284d6db222ba6645fc8796db4 277 SUPERFAMILY SSF51569 9 276 1.19E-108 T 11-10-2018 DB34_10115 ee6e29b284d6db222ba6645fc8796db4 277 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 16 277 51.693 T 11-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 DB34_01555 27017d95e3f55014d1d01be1aa905ee6 447 Gene3D G3DSA:3.50.50.60 239 379 3.7E-53 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_01555 27017d95e3f55014d1d01be1aa905ee6 447 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 18 128 2.0E-37 T 11-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 DB34_01555 27017d95e3f55014d1d01be1aa905ee6 447 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 141 432 1.5E-35 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DB34_01555 27017d95e3f55014d1d01be1aa905ee6 447 Gene3D G3DSA:3.50.50.60 143 438 3.7E-53 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_01555 27017d95e3f55014d1d01be1aa905ee6 447 SUPERFAMILY SSF46548 7 150 1.1E-31 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DB34_01555 27017d95e3f55014d1d01be1aa905ee6 447 Gene3D G3DSA:1.10.1060.10 4 141 4.9E-41 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DB34_01555 27017d95e3f55014d1d01be1aa905ee6 447 PRINTS PR00419 Adrenodoxin reductase family signature 164 177 4.9E-19 T 11-10-2018 DB34_01555 27017d95e3f55014d1d01be1aa905ee6 447 PRINTS PR00419 Adrenodoxin reductase family signature 275 289 4.9E-19 T 11-10-2018 DB34_01555 27017d95e3f55014d1d01be1aa905ee6 447 PRINTS PR00419 Adrenodoxin reductase family signature 141 163 4.9E-19 T 11-10-2018 DB34_01555 27017d95e3f55014d1d01be1aa905ee6 447 SUPERFAMILY SSF51971 138 380 6.47E-57 T 11-10-2018 DB34_08710 c65248e62329b9a92c86c08993f6996f 177 SUPERFAMILY SSF56053 83 177 2.16E-36 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_08710 c65248e62329b9a92c86c08993f6996f 177 SUPERFAMILY SSF56053 2 82 1.67E-20 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_08710 c65248e62329b9a92c86c08993f6996f 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 11-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_08710 c65248e62329b9a92c86c08993f6996f 177 Pfam PF00347 Ribosomal protein L6 11 82 5.6E-13 T 11-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_08710 c65248e62329b9a92c86c08993f6996f 177 Pfam PF00347 Ribosomal protein L6 91 164 2.9E-20 T 11-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_08710 c65248e62329b9a92c86c08993f6996f 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 35.826 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 DB34_08710 c65248e62329b9a92c86c08993f6996f 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 3.9E-30 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 DB34_08710 c65248e62329b9a92c86c08993f6996f 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 3.9E-30 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 DB34_08710 c65248e62329b9a92c86c08993f6996f 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 3.9E-30 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 DB34_08710 c65248e62329b9a92c86c08993f6996f 177 Gene3D G3DSA:3.90.930.12 83 177 8.8E-40 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_08710 c65248e62329b9a92c86c08993f6996f 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 8.3E-71 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 DB34_08710 c65248e62329b9a92c86c08993f6996f 177 Gene3D G3DSA:3.90.930.12 1 82 3.3E-25 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_08710 c65248e62329b9a92c86c08993f6996f 177 PIRSF PIRSF002162 1 177 3.6E-47 T 11-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_08040 3c3db84ec3350c81e86ce2dcb91e5836 881 Gene3D G3DSA:3.30.930.10 2 241 2.7E-105 T 11-10-2018 DB34_08040 3c3db84ec3350c81e86ce2dcb91e5836 881 SUPERFAMILY SSF50447 453 552 4.0E-19 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DB34_08040 3c3db84ec3350c81e86ce2dcb91e5836 881 Pfam PF02272 DHHA1 domain 740 877 1.1E-16 T 11-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 DB34_08040 3c3db84ec3350c81e86ce2dcb91e5836 881 SUPERFAMILY SSF101353 246 461 1.83E-55 T 11-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 DB34_08040 3c3db84ec3350c81e86ce2dcb91e5836 881 SUPERFAMILY SSF55186 552 714 2.09E-48 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 DB34_08040 3c3db84ec3350c81e86ce2dcb91e5836 881 Gene3D G3DSA:3.30.980.10 563 704 2.6E-47 T 11-10-2018 DB34_08040 3c3db84ec3350c81e86ce2dcb91e5836 881 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 6 860 3.0E-278 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 DB34_08040 3c3db84ec3350c81e86ce2dcb91e5836 881 SUPERFAMILY SSF55681 2 245 1.04E-104 T 11-10-2018 DB34_08040 3c3db84ec3350c81e86ce2dcb91e5836 881 SMART SM00863 653 703 4.8E-21 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 DB34_08040 3c3db84ec3350c81e86ce2dcb91e5836 881 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 881 185.084 T 11-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 DB34_08040 3c3db84ec3350c81e86ce2dcb91e5836 881 Pfam PF01411 tRNA synthetases class II (A) 6 556 1.6E-207 T 11-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 DB34_08040 3c3db84ec3350c81e86ce2dcb91e5836 881 Gene3D G3DSA:2.40.30.130 458 552 1.2E-11 T 11-10-2018 DB34_08040 3c3db84ec3350c81e86ce2dcb91e5836 881 PRINTS PR00980 Alanyl-tRNA synthetase signature 226 239 6.4E-31 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 DB34_08040 3c3db84ec3350c81e86ce2dcb91e5836 881 PRINTS PR00980 Alanyl-tRNA synthetase signature 75 86 6.4E-31 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 DB34_08040 3c3db84ec3350c81e86ce2dcb91e5836 881 PRINTS PR00980 Alanyl-tRNA synthetase signature 274 290 6.4E-31 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 DB34_08040 3c3db84ec3350c81e86ce2dcb91e5836 881 PRINTS PR00980 Alanyl-tRNA synthetase signature 199 210 6.4E-31 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 DB34_08040 3c3db84ec3350c81e86ce2dcb91e5836 881 PRINTS PR00980 Alanyl-tRNA synthetase signature 298 311 6.4E-31 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 DB34_08040 3c3db84ec3350c81e86ce2dcb91e5836 881 Gene3D G3DSA:3.10.310.40 769 879 2.3E-21 T 11-10-2018 DB34_08040 3c3db84ec3350c81e86ce2dcb91e5836 881 Gene3D G3DSA:3.30.54.20 624 684 2.6E-47 T 11-10-2018 DB34_08040 3c3db84ec3350c81e86ce2dcb91e5836 881 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 653 703 9.1E-19 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 DB34_13030 667b767dc3904c21e44b2349b558ec7b 331 SUPERFAMILY SSF53098 134 293 2.66E-36 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily DB34_13030 667b767dc3904c21e44b2349b558ec7b 331 Gene3D G3DSA:3.30.420.10 128 299 1.5E-28 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DB34_13030 667b767dc3904c21e44b2349b558ec7b 331 SUPERFAMILY SSF46689 20 110 6.45E-6 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB34_13030 667b767dc3904c21e44b2349b558ec7b 331 Pfam PF00665 Integrase core domain 136 249 4.1E-23 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 DB34_11585 667b767dc3904c21e44b2349b558ec7b 331 SUPERFAMILY SSF53098 134 293 2.66E-36 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily DB34_11585 667b767dc3904c21e44b2349b558ec7b 331 Gene3D G3DSA:3.30.420.10 128 299 1.5E-28 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DB34_11585 667b767dc3904c21e44b2349b558ec7b 331 SUPERFAMILY SSF46689 20 110 6.45E-6 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB34_11585 667b767dc3904c21e44b2349b558ec7b 331 Pfam PF00665 Integrase core domain 136 249 4.1E-23 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 DB34_04990 667b767dc3904c21e44b2349b558ec7b 331 SUPERFAMILY SSF53098 134 293 2.66E-36 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily DB34_04990 667b767dc3904c21e44b2349b558ec7b 331 Gene3D G3DSA:3.30.420.10 128 299 1.5E-28 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DB34_04990 667b767dc3904c21e44b2349b558ec7b 331 SUPERFAMILY SSF46689 20 110 6.45E-6 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB34_04990 667b767dc3904c21e44b2349b558ec7b 331 Pfam PF00665 Integrase core domain 136 249 4.1E-23 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 DB34_12830 667b767dc3904c21e44b2349b558ec7b 331 SUPERFAMILY SSF53098 134 293 2.66E-36 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily DB34_12830 667b767dc3904c21e44b2349b558ec7b 331 Gene3D G3DSA:3.30.420.10 128 299 1.5E-28 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DB34_12830 667b767dc3904c21e44b2349b558ec7b 331 SUPERFAMILY SSF46689 20 110 6.45E-6 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB34_12830 667b767dc3904c21e44b2349b558ec7b 331 Pfam PF00665 Integrase core domain 136 249 4.1E-23 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 DB34_11225 667b767dc3904c21e44b2349b558ec7b 331 SUPERFAMILY SSF53098 134 293 2.66E-36 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily DB34_11225 667b767dc3904c21e44b2349b558ec7b 331 Gene3D G3DSA:3.30.420.10 128 299 1.5E-28 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DB34_11225 667b767dc3904c21e44b2349b558ec7b 331 SUPERFAMILY SSF46689 20 110 6.45E-6 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB34_11225 667b767dc3904c21e44b2349b558ec7b 331 Pfam PF00665 Integrase core domain 136 249 4.1E-23 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 DB34_08185 667b767dc3904c21e44b2349b558ec7b 331 SUPERFAMILY SSF53098 134 293 2.66E-36 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily DB34_08185 667b767dc3904c21e44b2349b558ec7b 331 Gene3D G3DSA:3.30.420.10 128 299 1.5E-28 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DB34_08185 667b767dc3904c21e44b2349b558ec7b 331 SUPERFAMILY SSF46689 20 110 6.45E-6 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB34_08185 667b767dc3904c21e44b2349b558ec7b 331 Pfam PF00665 Integrase core domain 136 249 4.1E-23 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 DB34_01150 314acc9095083b80ef276cff8cbf0439 315 SUPERFAMILY SSF46785 1 100 3.74E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB34_01150 314acc9095083b80ef276cff8cbf0439 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.0E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB34_01150 314acc9095083b80ef276cff8cbf0439 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.0E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB34_01150 314acc9095083b80ef276cff8cbf0439 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.0E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB34_01150 314acc9095083b80ef276cff8cbf0439 315 SUPERFAMILY SSF53850 89 302 7.6E-34 T 11-10-2018 DB34_01150 314acc9095083b80ef276cff8cbf0439 315 Pfam PF03466 LysR substrate binding domain 88 292 3.2E-31 T 11-10-2018 IPR005119 LysR, substrate-binding DB34_01150 314acc9095083b80ef276cff8cbf0439 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 5.1E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB34_01150 314acc9095083b80ef276cff8cbf0439 315 Gene3D G3DSA:3.40.190.290 91 302 1.4E-34 T 11-10-2018 DB34_01150 314acc9095083b80ef276cff8cbf0439 315 Gene3D G3DSA:1.10.10.10 1 87 4.1E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB34_10915 1499860cb6c5156886e25e9ce917fbec 252 SUPERFAMILY SSF53790 2 248 2.36E-63 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 DB34_10915 1499860cb6c5156886e25e9ce917fbec 252 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 3 208 1.9E-42 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 DB34_10915 1499860cb6c5156886e25e9ce917fbec 252 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 76 109 - T 11-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DB34_10915 1499860cb6c5156886e25e9ce917fbec 252 Gene3D G3DSA:3.40.1010.10 1 110 4.6E-27 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 DB34_10915 1499860cb6c5156886e25e9ce917fbec 252 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 6 20 - T 11-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DB34_10915 1499860cb6c5156886e25e9ce917fbec 252 TIGRFAM TIGR01465 cobM_cbiF: precorrin-4 C11-methyltransferase 3 249 1.3E-93 T 11-10-2018 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase GO:0009236|GO:0046026 DB34_10915 1499860cb6c5156886e25e9ce917fbec 252 Gene3D G3DSA:3.30.950.10 111 230 5.5E-42 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 DB34_13405 46c2c57b5ef60296554c3aa3f62a0a19 188 SMART SM00841 130 185 1.4E-29 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 DB34_13405 46c2c57b5ef60296554c3aa3f62a0a19 188 SMART SM01185 68 122 5.5E-21 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 DB34_13405 46c2c57b5ef60296554c3aa3f62a0a19 188 TIGRFAM TIGR00038 efp: translation elongation factor P 4 186 3.9E-68 T 11-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 DB34_13405 46c2c57b5ef60296554c3aa3f62a0a19 188 ProSitePatterns PS01275 Elongation factor P signature. 151 170 - T 11-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site DB34_13405 46c2c57b5ef60296554c3aa3f62a0a19 188 SUPERFAMILY SSF50249 130 186 2.91E-17 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB34_13405 46c2c57b5ef60296554c3aa3f62a0a19 188 Pfam PF09285 Elongation factor P, C-terminal 130 185 7.0E-24 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 DB34_13405 46c2c57b5ef60296554c3aa3f62a0a19 188 Hamap MF_00141 Elongation factor P [efp]. 2 186 41.604 T 11-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 DB34_13405 46c2c57b5ef60296554c3aa3f62a0a19 188 SUPERFAMILY SSF50249 67 127 2.06E-15 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB34_13405 46c2c57b5ef60296554c3aa3f62a0a19 188 Gene3D G3DSA:2.40.50.140 129 187 1.1E-23 T 11-10-2018 DB34_13405 46c2c57b5ef60296554c3aa3f62a0a19 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 69 122 3.4E-18 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 DB34_13405 46c2c57b5ef60296554c3aa3f62a0a19 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 61 2.5E-20 T 11-10-2018 IPR013185 Translation elongation factor, KOW-like DB34_13405 46c2c57b5ef60296554c3aa3f62a0a19 188 Gene3D G3DSA:2.30.30.30 4 63 1.1E-19 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 DB34_13405 46c2c57b5ef60296554c3aa3f62a0a19 188 Gene3D G3DSA:2.40.50.140 66 128 1.7E-18 T 11-10-2018 DB34_13405 46c2c57b5ef60296554c3aa3f62a0a19 188 PIRSF PIRSF005901 1 187 3.2E-66 T 11-10-2018 IPR020599 Translation elongation factor P/YeiP DB34_13405 46c2c57b5ef60296554c3aa3f62a0a19 188 SUPERFAMILY SSF50104 4 63 6.62E-16 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily DB34_02965 4247a7b09f3e5dca3255d6af7dccbacb 376 SUPERFAMILY SSF51419 16 261 6.25E-67 T 11-10-2018 IPR029066 PLP-binding barrel DB34_02965 4247a7b09f3e5dca3255d6af7dccbacb 376 Gene3D G3DSA:3.20.20.10 23 261 8.0E-89 T 11-10-2018 IPR029066 PLP-binding barrel DB34_02965 4247a7b09f3e5dca3255d6af7dccbacb 376 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 260 347 2.5E-7 T 11-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 DB34_02965 4247a7b09f3e5dca3255d6af7dccbacb 376 SUPERFAMILY SSF50621 232 376 8.58E-25 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DB34_02965 4247a7b09f3e5dca3255d6af7dccbacb 376 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 25 259 1.2E-53 T 11-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 DB34_02965 4247a7b09f3e5dca3255d6af7dccbacb 376 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 64 76 1.3E-16 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DB34_02965 4247a7b09f3e5dca3255d6af7dccbacb 376 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 249 268 1.3E-16 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DB34_02965 4247a7b09f3e5dca3255d6af7dccbacb 376 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 44 62 1.3E-16 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DB34_02965 4247a7b09f3e5dca3255d6af7dccbacb 376 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 166 179 1.3E-16 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DB34_02965 4247a7b09f3e5dca3255d6af7dccbacb 376 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 201 217 - T 11-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site DB34_02965 4247a7b09f3e5dca3255d6af7dccbacb 376 PRINTS PR01182 Ornithine decarboxylase signature 42 69 4.8E-19 T 11-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 DB34_02965 4247a7b09f3e5dca3255d6af7dccbacb 376 PRINTS PR01182 Ornithine decarboxylase signature 16 40 4.8E-19 T 11-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 DB34_02965 4247a7b09f3e5dca3255d6af7dccbacb 376 PRINTS PR01182 Ornithine decarboxylase signature 116 138 4.8E-19 T 11-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 DB34_02965 4247a7b09f3e5dca3255d6af7dccbacb 376 PRINTS PR01182 Ornithine decarboxylase signature 86 110 4.8E-19 T 11-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 DB34_02965 4247a7b09f3e5dca3255d6af7dccbacb 376 PRINTS PR01182 Ornithine decarboxylase signature 318 328 4.8E-19 T 11-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 DB34_02965 4247a7b09f3e5dca3255d6af7dccbacb 376 Gene3D G3DSA:2.40.37.10 15 369 8.0E-89 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DB34_02965 4247a7b09f3e5dca3255d6af7dccbacb 376 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 44 62 - T 11-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site DB34_06200 cbcfa3424cd866d8bba93f1fcf0bc796 482 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 278 289 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 DB34_06200 cbcfa3424cd866d8bba93f1fcf0bc796 482 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 250 257 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 DB34_06200 cbcfa3424cd866d8bba93f1fcf0bc796 482 Gene3D G3DSA:3.40.309.10 254 447 1.4E-181 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DB34_06200 cbcfa3424cd866d8bba93f1fcf0bc796 482 Gene3D G3DSA:3.40.605.10 25 476 1.4E-181 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DB34_06200 cbcfa3424cd866d8bba93f1fcf0bc796 482 Pfam PF00171 Aldehyde dehydrogenase family 15 478 6.9E-174 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DB34_06200 cbcfa3424cd866d8bba93f1fcf0bc796 482 SUPERFAMILY SSF53720 5 481 2.09E-169 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DB34_09130 3730bfd8ea5e990c4627f33bf694c272 66 Pfam PF01632 Ribosomal protein L35 2 60 8.5E-18 T 11-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_09130 3730bfd8ea5e990c4627f33bf694c272 66 Gene3D G3DSA:2.40.50.530 1 64 9.1E-21 T 11-10-2018 DB34_09130 3730bfd8ea5e990c4627f33bf694c272 66 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 11-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_09130 3730bfd8ea5e990c4627f33bf694c272 66 SUPERFAMILY SSF143034 2 64 5.1E-19 T 11-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_09130 3730bfd8ea5e990c4627f33bf694c272 66 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 14.869 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 DB34_09130 3730bfd8ea5e990c4627f33bf694c272 66 PRINTS PR00064 Ribosomal protein L35 signature 21 35 2.1E-9 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 DB34_09130 3730bfd8ea5e990c4627f33bf694c272 66 PRINTS PR00064 Ribosomal protein L35 signature 3 20 2.1E-9 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 DB34_09130 3730bfd8ea5e990c4627f33bf694c272 66 PRINTS PR00064 Ribosomal protein L35 signature 36 54 2.1E-9 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 DB34_09130 3730bfd8ea5e990c4627f33bf694c272 66 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 63 8.3E-19 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 DB34_02630 af2757142d32e353e0af0ff0c1e66d76 751 Gene3D G3DSA:3.40.50.300 488 744 3.0E-81 T 11-10-2018 DB34_02630 af2757142d32e353e0af0ff0c1e66d76 751 SUPERFAMILY SSF90123 166 479 2.88E-48 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DB34_02630 af2757142d32e353e0af0ff0c1e66d76 751 Gene3D G3DSA:3.90.70.10 32 157 1.3E-8 T 11-10-2018 DB34_02630 af2757142d32e353e0af0ff0c1e66d76 751 ProSitePatterns PS00211 ABC transporters family signature. 633 647 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB34_02630 af2757142d32e353e0af0ff0c1e66d76 751 SUPERFAMILY SSF52540 489 731 3.73E-81 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_02630 af2757142d32e353e0af0ff0c1e66d76 751 Pfam PF00664 ABC transporter transmembrane region 182 441 3.6E-30 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DB34_02630 af2757142d32e353e0af0ff0c1e66d76 751 SMART SM00382 521 722 1.8E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_02630 af2757142d32e353e0af0ff0c1e66d76 751 Pfam PF00005 ABC transporter 512 661 7.6E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB34_02630 af2757142d32e353e0af0ff0c1e66d76 751 Gene3D G3DSA:1.20.1560.10 166 481 1.3E-49 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DB34_06080 67b98f837e61b8258ad73894072e6ecc 310 Gene3D G3DSA:3.40.50.10490 7 221 3.5E-57 T 11-10-2018 DB34_06080 67b98f837e61b8258ad73894072e6ecc 310 Gene3D G3DSA:1.10.8.1080 222 299 5.4E-22 T 11-10-2018 DB34_06080 67b98f837e61b8258ad73894072e6ecc 310 SUPERFAMILY SSF53697 12 251 8.23E-55 T 11-10-2018 DB34_06080 67b98f837e61b8258ad73894072e6ecc 310 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 188 205 - T 11-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 DB34_02760 5870726aa8dff8ffbb75b28d86a5ffa1 158 SUPERFAMILY SSF52161 7 145 1.7E-52 T 11-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 DB34_02760 5870726aa8dff8ffbb75b28d86a5ffa1 158 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 16 143 27.617 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 DB34_02760 5870726aa8dff8ffbb75b28d86a5ffa1 158 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 8 143 2.1E-57 T 11-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_02760 5870726aa8dff8ffbb75b28d86a5ffa1 158 PIRSF PIRSF002181 1 157 2.3E-48 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 DB34_02760 5870726aa8dff8ffbb75b28d86a5ffa1 158 Gene3D G3DSA:3.90.1180.10 5 150 7.5E-56 T 11-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 DB34_02760 5870726aa8dff8ffbb75b28d86a5ffa1 158 Pfam PF00572 Ribosomal protein L13 15 140 5.4E-51 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 DB34_02195 5c1a96886c45205bba1240b942995e5a 446 Pfam PF13433 Periplasmic binding protein domain 44 414 7.6E-170 T 11-10-2018 DB34_02195 5c1a96886c45205bba1240b942995e5a 446 SUPERFAMILY SSF53822 43 418 1.73E-88 T 11-10-2018 IPR028082 Periplasmic binding protein-like I DB34_02195 5c1a96886c45205bba1240b942995e5a 446 TIGRFAM TIGR03407 urea_ABC_UrtA: urea ABC transporter, urea binding protein 44 411 5.6E-170 T 11-10-2018 IPR017777 Urea ABC transporter, substrate-binding protein UrtA-like DB34_02195 5c1a96886c45205bba1240b942995e5a 446 Gene3D G3DSA:3.40.50.2300 159 401 2.0E-130 T 11-10-2018 DB34_02195 5c1a96886c45205bba1240b942995e5a 446 Gene3D G3DSA:3.40.50.2300 46 382 2.0E-130 T 11-10-2018 DB34_10125 f86ed824b64dc99ae5705ab3acb2086a 372 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 5 348 5.2E-50 T 11-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 DB34_10125 f86ed824b64dc99ae5705ab3acb2086a 372 Gene3D G3DSA:1.20.1050.90 124 310 2.3E-79 T 11-10-2018 DB34_10125 f86ed824b64dc99ae5705ab3acb2086a 372 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 27 337 8.6E-12 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DB34_10125 f86ed824b64dc99ae5705ab3acb2086a 372 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 372 74.512 T 11-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 DB34_10125 f86ed824b64dc99ae5705ab3acb2086a 372 Gene3D G3DSA:3.40.50.300 7 346 2.3E-79 T 11-10-2018 DB34_10125 f86ed824b64dc99ae5705ab3acb2086a 372 ProSitePatterns PS00617 RecF protein signature 1. 121 141 - T 11-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 DB34_10125 f86ed824b64dc99ae5705ab3acb2086a 372 SUPERFAMILY SSF52540 3 348 1.17E-36 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_07955 84e51cbff454b0059b679f9dfb497126 414 SUPERFAMILY SSF51230 1 95 5.8E-25 T 11-10-2018 IPR011053 Single hybrid motif DB34_07955 84e51cbff454b0059b679f9dfb497126 414 Pfam PF02817 e3 binding domain 126 160 4.4E-10 T 11-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 DB34_07955 84e51cbff454b0059b679f9dfb497126 414 Gene3D G3DSA:3.30.559.10 183 414 2.7E-90 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 DB34_07955 84e51cbff454b0059b679f9dfb497126 414 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 DB34_07955 84e51cbff454b0059b679f9dfb497126 414 SUPERFAMILY SSF52777 184 413 1.02E-85 T 11-10-2018 DB34_07955 84e51cbff454b0059b679f9dfb497126 414 Gene3D G3DSA:2.40.50.100 2 103 9.0E-23 T 11-10-2018 DB34_07955 84e51cbff454b0059b679f9dfb497126 414 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 184 411 3.6E-76 T 11-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 DB34_07955 84e51cbff454b0059b679f9dfb497126 414 Pfam PF00364 Biotin-requiring enzyme 4 76 1.2E-18 T 11-10-2018 IPR000089 Biotin/lipoyl attachment DB34_07955 84e51cbff454b0059b679f9dfb497126 414 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 3 414 1.0E-162 T 11-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 DB34_07955 84e51cbff454b0059b679f9dfb497126 414 SUPERFAMILY SSF47005 125 164 5.23E-7 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 DB34_07955 84e51cbff454b0059b679f9dfb497126 414 Gene3D G3DSA:4.10.320.10 126 168 3.3E-10 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 DB34_11045 d2b585416ae82b6cfec5d7cb26f9bec2 624 Pfam PF13502 AsmA-like C-terminal region 381 550 4.6E-10 T 11-10-2018 IPR032712 AsmA-like, C-terminal DB34_03635 4c8f21a0f339ee5eea36244af17f2999 358 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 358 162.25 T 11-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 DB34_03635 4c8f21a0f339ee5eea36244af17f2999 358 Gene3D G3DSA:1.10.10.10 264 342 5.0E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB34_03635 4c8f21a0f339ee5eea36244af17f2999 358 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 14 239 1.4E-110 T 11-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 DB34_03635 4c8f21a0f339ee5eea36244af17f2999 358 SUPERFAMILY SSF46785 263 337 1.17E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB34_03635 4c8f21a0f339ee5eea36244af17f2999 358 Gene3D G3DSA:3.40.50.300 23 185 6.0E-39 T 11-10-2018 DB34_03635 4c8f21a0f339ee5eea36244af17f2999 358 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 29 333 4.0E-129 T 11-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 DB34_03635 4c8f21a0f339ee5eea36244af17f2999 358 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 260 333 4.1E-29 T 11-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 DB34_03635 4c8f21a0f339ee5eea36244af17f2999 358 SUPERFAMILY SSF52540 25 255 5.03E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_03635 4c8f21a0f339ee5eea36244af17f2999 358 SMART SM00382 56 183 2.3E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_03635 4c8f21a0f339ee5eea36244af17f2999 358 Gene3D G3DSA:1.10.8.60 186 263 1.7E-23 T 11-10-2018 DB34_03635 4c8f21a0f339ee5eea36244af17f2999 358 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 258 335 1.0E-32 T 11-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 DB34_13320 031456b5e55ff807bf87139ea34fb3d8 67 SMART SM00530 2 57 1.5E-14 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DB34_13320 031456b5e55ff807bf87139ea34fb3d8 67 Gene3D G3DSA:1.10.260.40 2 63 1.6E-16 T 11-10-2018 DB34_13320 031456b5e55ff807bf87139ea34fb3d8 67 Pfam PF01381 Helix-turn-helix 3 57 3.5E-15 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DB34_13320 031456b5e55ff807bf87139ea34fb3d8 67 SUPERFAMILY SSF47413 3 58 9.39E-15 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DB34_09925 b943d7863609f58a9713f93d38cd7881 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 213 237 2.0E-16 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DB34_09925 b943d7863609f58a9713f93d38cd7881 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 67 83 2.0E-16 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DB34_09925 b943d7863609f58a9713f93d38cd7881 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 45 65 2.0E-16 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DB34_09925 b943d7863609f58a9713f93d38cd7881 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 87 103 2.0E-16 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DB34_09925 b943d7863609f58a9713f93d38cd7881 268 SUPERFAMILY SSF56655 15 265 4.71E-63 T 11-10-2018 DB34_09925 b943d7863609f58a9713f93d38cd7881 268 Gene3D G3DSA:3.30.540.10 2 143 4.9E-38 T 11-10-2018 DB34_09925 b943d7863609f58a9713f93d38cd7881 268 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 87 100 - T 11-10-2018 IPR020583 Inositol monophosphatase, metal-binding site DB34_09925 b943d7863609f58a9713f93d38cd7881 268 Gene3D G3DSA:3.40.190.80 150 266 1.9E-27 T 11-10-2018 DB34_09925 b943d7863609f58a9713f93d38cd7881 268 Pfam PF00459 Inositol monophosphatase family 14 265 3.5E-44 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DB34_10255 42ac7c64c0b806215deb258dac4593d3 506 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 86 98 1.6E-27 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DB34_10255 42ac7c64c0b806215deb258dac4593d3 506 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 25 35 1.6E-27 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DB34_10255 42ac7c64c0b806215deb258dac4593d3 506 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 357 369 1.6E-27 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DB34_10255 42ac7c64c0b806215deb258dac4593d3 506 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 12 24 1.6E-27 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DB34_10255 42ac7c64c0b806215deb258dac4593d3 506 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 41 53 1.6E-27 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DB34_10255 42ac7c64c0b806215deb258dac4593d3 506 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 324 330 1.6E-27 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DB34_10255 42ac7c64c0b806215deb258dac4593d3 506 Gene3D G3DSA:3.30.9.10 90 331 3.6E-136 T 11-10-2018 DB34_10255 42ac7c64c0b806215deb258dac4593d3 506 SUPERFAMILY SSF51905 12 383 2.88E-33 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_10255 42ac7c64c0b806215deb258dac4593d3 506 SUPERFAMILY SSF54373 237 330 1.61E-5 T 11-10-2018 DB34_10255 42ac7c64c0b806215deb258dac4593d3 506 Gene3D G3DSA:1.10.8.870 404 473 8.9E-23 T 11-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DB34_10255 42ac7c64c0b806215deb258dac4593d3 506 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 392 495 4.8E-11 T 11-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DB34_10255 42ac7c64c0b806215deb258dac4593d3 506 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 17 34 - T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DB34_10255 42ac7c64c0b806215deb258dac4593d3 506 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 362 372 - T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DB34_10255 42ac7c64c0b806215deb258dac4593d3 506 Gene3D G3DSA:3.50.50.60 13 376 3.6E-136 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_10255 42ac7c64c0b806215deb258dac4593d3 506 Pfam PF01266 FAD dependent oxidoreductase 13 333 5.2E-47 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DB34_09905 eb76a179eca9bc9d605ff47d8fcf475f 296 Gene3D G3DSA:3.20.20.70 4 295 9.7E-114 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB34_09905 eb76a179eca9bc9d605ff47d8fcf475f 296 SMART SM01130 5 293 1.9E-144 T 11-10-2018 IPR002220 DapA-like GO:0016829 DB34_09905 eb76a179eca9bc9d605ff47d8fcf475f 296 PRINTS PR00146 Dihydrodipicolinate synthase signature 39 60 7.2E-33 T 11-10-2018 IPR002220 DapA-like GO:0016829 DB34_09905 eb76a179eca9bc9d605ff47d8fcf475f 296 PRINTS PR00146 Dihydrodipicolinate synthase signature 75 93 7.2E-33 T 11-10-2018 IPR002220 DapA-like GO:0016829 DB34_09905 eb76a179eca9bc9d605ff47d8fcf475f 296 PRINTS PR00146 Dihydrodipicolinate synthase signature 132 149 7.2E-33 T 11-10-2018 IPR002220 DapA-like GO:0016829 DB34_09905 eb76a179eca9bc9d605ff47d8fcf475f 296 PRINTS PR00146 Dihydrodipicolinate synthase signature 107 123 7.2E-33 T 11-10-2018 IPR002220 DapA-like GO:0016829 DB34_09905 eb76a179eca9bc9d605ff47d8fcf475f 296 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 137 167 - T 11-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 DB34_09905 eb76a179eca9bc9d605ff47d8fcf475f 296 SUPERFAMILY SSF51569 6 293 3.66E-107 T 11-10-2018 DB34_09905 eb76a179eca9bc9d605ff47d8fcf475f 296 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 8 289 7.0E-104 T 11-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DB34_09905 eb76a179eca9bc9d605ff47d8fcf475f 296 Pfam PF00701 Dihydrodipicolinate synthetase family 6 289 2.9E-98 T 11-10-2018 IPR002220 DapA-like GO:0016829 DB34_09905 eb76a179eca9bc9d605ff47d8fcf475f 296 PIRSF PIRSF001365 1 296 6.7E-98 T 11-10-2018 IPR002220 DapA-like GO:0016829 DB34_09905 eb76a179eca9bc9d605ff47d8fcf475f 296 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 5 291 64.529 T 11-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DB34_12880 4e48db958bea621f65bbe2c7169cef94 463 Gene3D G3DSA:3.40.50.2300 1 138 5.7E-38 T 11-10-2018 DB34_12880 4e48db958bea621f65bbe2c7169cef94 463 SUPERFAMILY SSF46689 353 455 7.17E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB34_12880 4e48db958bea621f65bbe2c7169cef94 463 Gene3D G3DSA:1.10.8.60 311 392 1.6E-23 T 11-10-2018 DB34_12880 4e48db958bea621f65bbe2c7169cef94 463 Pfam PF02954 Bacterial regulatory protein, Fis family 414 453 3.6E-9 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DB34_12880 4e48db958bea621f65bbe2c7169cef94 463 Pfam PF00072 Response regulator receiver domain 5 116 1.3E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB34_12880 4e48db958bea621f65bbe2c7169cef94 463 SUPERFAMILY SSF52540 141 374 4.15E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_12880 4e48db958bea621f65bbe2c7169cef94 463 Pfam PF00158 Sigma-54 interaction domain 143 306 2.2E-52 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DB34_12880 4e48db958bea621f65bbe2c7169cef94 463 Gene3D G3DSA:3.40.50.300 141 310 5.4E-51 T 11-10-2018 DB34_12880 4e48db958bea621f65bbe2c7169cef94 463 SUPERFAMILY SSF52172 4 186 2.7E-42 T 11-10-2018 IPR011006 CheY-like superfamily DB34_12880 4e48db958bea621f65bbe2c7169cef94 463 Gene3D G3DSA:1.10.10.60 401 458 3.0E-12 T 11-10-2018 DB34_12880 4e48db958bea621f65bbe2c7169cef94 463 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 226 241 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DB34_12880 4e48db958bea621f65bbe2c7169cef94 463 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 353 362 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site DB34_12880 4e48db958bea621f65bbe2c7169cef94 463 SMART SM00382 162 303 1.2E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_12880 4e48db958bea621f65bbe2c7169cef94 463 SMART SM00448 3 116 1.2E-34 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB34_10310 c6288d517e961555dd1778514b8bee3c 603 SMART SM00382 31 195 3.8E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_10310 c6288d517e961555dd1778514b8bee3c 603 SMART SM00382 308 479 1.3E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_10310 c6288d517e961555dd1778514b8bee3c 603 Gene3D G3DSA:3.40.50.300 246 514 3.3E-62 T 11-10-2018 DB34_10310 c6288d517e961555dd1778514b8bee3c 603 Gene3D G3DSA:3.40.50.300 1 229 1.2E-50 T 11-10-2018 DB34_10310 c6288d517e961555dd1778514b8bee3c 603 Pfam PF16326 ABC transporter C-terminal domain 526 594 3.8E-19 T 11-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 DB34_10310 c6288d517e961555dd1778514b8bee3c 603 SUPERFAMILY SSF52540 4 195 1.84E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_10310 c6288d517e961555dd1778514b8bee3c 603 SUPERFAMILY SSF52540 276 493 2.07E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_10310 c6288d517e961555dd1778514b8bee3c 603 Gene3D G3DSA:1.10.287.380 516 599 1.6E-20 T 11-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 DB34_10310 c6288d517e961555dd1778514b8bee3c 603 Pfam PF00005 ABC transporter 301 434 1.4E-22 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB34_10310 c6288d517e961555dd1778514b8bee3c 603 Pfam PF00005 ABC transporter 23 149 1.9E-22 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB34_10150 3c41299ced39072cd421d0459cc8c745 260 Pfam PF01209 ubiE/COQ5 methyltransferase family 30 258 6.0E-86 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 DB34_10150 3c41299ced39072cd421d0459cc8c745 260 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 36 258 2.0E-78 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 DB34_10150 3c41299ced39072cd421d0459cc8c745 260 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 47 62 - T 11-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 DB34_10150 3c41299ced39072cd421d0459cc8c745 260 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 167 181 - T 11-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 DB34_10150 3c41299ced39072cd421d0459cc8c745 260 SUPERFAMILY SSF53335 28 256 1.42E-42 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB34_10150 3c41299ced39072cd421d0459cc8c745 260 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 27 259 37.495 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 DB34_10150 3c41299ced39072cd421d0459cc8c745 260 Gene3D G3DSA:3.40.50.150 42 260 2.0E-72 T 11-10-2018 DB34_07820 923c5f76c20ba9cc79436bfa3858232c 235 Pfam PF00702 haloacid dehalogenase-like hydrolase 11 197 7.0E-6 T 11-10-2018 DB34_07820 923c5f76c20ba9cc79436bfa3858232c 235 TIGRFAM TIGR01691 enolase-ppase: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 10 223 2.8E-80 T 11-10-2018 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|Reactome: R-HSA-1237112 DB34_07820 923c5f76c20ba9cc79436bfa3858232c 235 Gene3D G3DSA:3.40.50.1000 13 210 6.3E-65 T 11-10-2018 IPR023214 HAD superfamily DB34_07820 923c5f76c20ba9cc79436bfa3858232c 235 Gene3D G3DSA:1.10.720.60 23 100 6.3E-65 T 11-10-2018 DB34_07820 923c5f76c20ba9cc79436bfa3858232c 235 Hamap MF_01681 Enolase-phosphatase E1 [mtnC]. 8 225 37.34 T 11-10-2018 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|Reactome: R-HSA-1237112 DB34_07820 923c5f76c20ba9cc79436bfa3858232c 235 SUPERFAMILY SSF56784 8 219 2.48E-48 T 11-10-2018 IPR036412 HAD-like superfamily DB34_02640 7a0820ef2456bced3ba46f01c3c391cb 1168 Pfam PF02310 B12 binding domain 726 823 1.3E-19 T 11-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 DB34_02640 7a0820ef2456bced3ba46f01c3c391cb 1168 SMART SM01018 638 720 1.2E-41 T 11-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DB34_02640 7a0820ef2456bced3ba46f01c3c391cb 1168 SUPERFAMILY SSF82282 6 389 5.1E-99 T 11-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 DB34_02640 7a0820ef2456bced3ba46f01c3c391cb 1168 Pfam PF02574 Homocysteine S-methyltransferase 16 304 1.3E-61 T 11-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 DB34_02640 7a0820ef2456bced3ba46f01c3c391cb 1168 PIRSF PIRSF000381 1 1168 0.0 T 11-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DB34_02640 7a0820ef2456bced3ba46f01c3c391cb 1168 Pfam PF02607 B12 binding domain 641 713 5.4E-29 T 11-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DB34_02640 7a0820ef2456bced3ba46f01c3c391cb 1168 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 964 1168 4.9E-39 T 11-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DB34_02640 7a0820ef2456bced3ba46f01c3c391cb 1168 SUPERFAMILY SSF56507 894 1168 8.89E-86 T 11-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DB34_02640 7a0820ef2456bced3ba46f01c3c391cb 1168 Gene3D G3DSA:3.20.20.20 336 629 1.7E-91 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DB34_02640 7a0820ef2456bced3ba46f01c3c391cb 1168 TIGRFAM TIGR02082 metH: methionine synthase 12 1168 0.0 T 11-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DB34_02640 7a0820ef2456bced3ba46f01c3c391cb 1168 Gene3D G3DSA:3.20.20.330 3 314 3.4E-89 T 11-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 DB34_02640 7a0820ef2456bced3ba46f01c3c391cb 1168 Gene3D G3DSA:3.10.196.10 904 1168 7.2E-55 T 11-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DB34_02640 7a0820ef2456bced3ba46f01c3c391cb 1168 SUPERFAMILY SSF51717 348 615 7.98E-72 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DB34_02640 7a0820ef2456bced3ba46f01c3c391cb 1168 Pfam PF00809 Pterin binding enzyme 350 583 5.4E-38 T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DB34_02640 7a0820ef2456bced3ba46f01c3c391cb 1168 SUPERFAMILY SSF47644 637 717 9.94E-25 T 11-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DB34_02640 7a0820ef2456bced3ba46f01c3c391cb 1168 Gene3D G3DSA:3.40.50.280 722 873 1.9E-42 T 11-10-2018 DB34_02640 7a0820ef2456bced3ba46f01c3c391cb 1168 Gene3D G3DSA:1.10.1240.10 631 717 7.5E-32 T 11-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DB34_02640 7a0820ef2456bced3ba46f01c3c391cb 1168 SUPERFAMILY SSF52242 722 852 1.83E-36 T 11-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 DB34_02640 7a0820ef2456bced3ba46f01c3c391cb 1168 Gene3D G3DSA:1.10.288.10 920 978 7.2E-55 T 11-10-2018 DB34_07330 3355ee1b03cb6d4843120330ed5a27cd 207 Gene3D G3DSA:3.40.50.1010 1 168 5.0E-47 T 11-10-2018 DB34_07330 3355ee1b03cb6d4843120330ed5a27cd 207 Pfam PF01936 NYN domain 8 165 8.8E-36 T 11-10-2018 IPR021139 NYN domain, limkain-b1-type DB34_05890 68906a792617f3b8949c90bfffe647f9 601 Gene3D G3DSA:2.40.160.180 193 600 2.0E-91 T 11-10-2018 IPR038673 Carbohydrate-selective porin OprB superfamily DB34_05890 68906a792617f3b8949c90bfffe647f9 601 Pfam PF04966 Carbohydrate-selective porin, OprB family 233 597 1.8E-59 T 11-10-2018 IPR007049 Carbohydrate-selective porin OprB GO:0008643|GO:0015288|GO:0016021 DB34_10625 4c2f1de97dc4868cc163a49e3d0706f3 461 SUPERFAMILY SSF53098 158 398 1.14E-5 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily DB34_10625 4c2f1de97dc4868cc163a49e3d0706f3 461 Pfam PF13701 Transposase DDE domain group 1 13 458 2.5E-165 T 11-10-2018 IPR025668 Transposase DDE domain DB34_12890 2966fa32aa7b55cf3f7c7cb75cf71f32 480 Gene3D G3DSA:1.10.8.60 310 387 3.5E-21 T 11-10-2018 DB34_12890 2966fa32aa7b55cf3f7c7cb75cf71f32 480 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 166 179 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DB34_12890 2966fa32aa7b55cf3f7c7cb75cf71f32 480 Gene3D G3DSA:1.10.10.60 389 473 1.7E-21 T 11-10-2018 DB34_12890 2966fa32aa7b55cf3f7c7cb75cf71f32 480 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 437 454 2.7E-10 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DB34_12890 2966fa32aa7b55cf3f7c7cb75cf71f32 480 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 454 474 2.7E-10 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DB34_12890 2966fa32aa7b55cf3f7c7cb75cf71f32 480 SMART SM00448 5 116 1.1E-33 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB34_12890 2966fa32aa7b55cf3f7c7cb75cf71f32 480 SUPERFAMILY SSF52540 142 379 1.62E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_12890 2966fa32aa7b55cf3f7c7cb75cf71f32 480 SUPERFAMILY SSF46689 351 473 3.67E-19 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB34_12890 2966fa32aa7b55cf3f7c7cb75cf71f32 480 Gene3D G3DSA:3.40.50.2300 1 134 5.0E-34 T 11-10-2018 DB34_12890 2966fa32aa7b55cf3f7c7cb75cf71f32 480 Gene3D G3DSA:3.40.50.300 135 309 1.7E-60 T 11-10-2018 DB34_12890 2966fa32aa7b55cf3f7c7cb75cf71f32 480 Pfam PF00072 Response regulator receiver domain 7 116 1.6E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB34_12890 2966fa32aa7b55cf3f7c7cb75cf71f32 480 Pfam PF02954 Bacterial regulatory protein, Fis family 431 469 3.5E-13 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DB34_12890 2966fa32aa7b55cf3f7c7cb75cf71f32 480 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 351 360 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site DB34_12890 2966fa32aa7b55cf3f7c7cb75cf71f32 480 Pfam PF00158 Sigma-54 interaction domain 142 305 1.7E-60 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DB34_12890 2966fa32aa7b55cf3f7c7cb75cf71f32 480 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 7 471 1.2E-193 T 11-10-2018 IPR010114 DNA-binding transcriptional regulator NtrC GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 DB34_12890 2966fa32aa7b55cf3f7c7cb75cf71f32 480 SMART SM00382 162 302 2.9E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_12890 2966fa32aa7b55cf3f7c7cb75cf71f32 480 SUPERFAMILY SSF52172 5 186 2.99E-41 T 11-10-2018 IPR011006 CheY-like superfamily DB34_12405 848aff62b68c403ff1da6280a7691e5b 637 Pfam PF00270 DEAD/DEAH box helicase 179 347 5.7E-51 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DB34_12405 848aff62b68c403ff1da6280a7691e5b 637 SMART SM00487 174 374 1.8E-60 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DB34_12405 848aff62b68c403ff1da6280a7691e5b 637 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 305 313 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site DB34_12405 848aff62b68c403ff1da6280a7691e5b 637 SMART SM00490 410 491 2.4E-33 T 11-10-2018 IPR001650 Helicase, C-terminal DB34_12405 848aff62b68c403ff1da6280a7691e5b 637 SUPERFAMILY SSF52540 227 511 5.35E-75 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_12405 848aff62b68c403ff1da6280a7691e5b 637 Gene3D G3DSA:3.40.50.300 367 545 3.8E-48 T 11-10-2018 DB34_12405 848aff62b68c403ff1da6280a7691e5b 637 Gene3D G3DSA:3.40.50.300 119 362 6.3E-78 T 11-10-2018 DB34_12405 848aff62b68c403ff1da6280a7691e5b 637 Pfam PF00271 Helicase conserved C-terminal domain 384 491 2.1E-28 T 11-10-2018 IPR001650 Helicase, C-terminal DB34_09025 105cdf494056f10f87cb21674933295a 404 Gene3D G3DSA:1.10.8.260 267 326 3.6E-122 T 11-10-2018 IPR023166 HI0933-like insert domain superfamily DB34_09025 105cdf494056f10f87cb21674933295a 404 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 12 395 9.9E-116 T 11-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like DB34_09025 105cdf494056f10f87cb21674933295a 404 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 161 170 2.2E-8 T 11-10-2018 DB34_09025 105cdf494056f10f87cb21674933295a 404 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 366 373 2.2E-8 T 11-10-2018 DB34_09025 105cdf494056f10f87cb21674933295a 404 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 11 33 2.2E-8 T 11-10-2018 DB34_09025 105cdf494056f10f87cb21674933295a 404 SUPERFAMILY SSF160996 195 344 1.12E-36 T 11-10-2018 DB34_09025 105cdf494056f10f87cb21674933295a 404 Gene3D G3DSA:2.40.30.10 194 343 3.6E-122 T 11-10-2018 DB34_09025 105cdf494056f10f87cb21674933295a 404 Pfam PF03486 HI0933-like protein 11 396 3.7E-132 T 11-10-2018 DB34_09025 105cdf494056f10f87cb21674933295a 404 SUPERFAMILY SSF51905 10 400 2.1E-54 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_09025 105cdf494056f10f87cb21674933295a 404 Gene3D G3DSA:3.50.50.60 12 395 3.6E-122 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_03760 37c40f2663db372109c028ab4170f27b 1052 Gene3D G3DSA:3.90.550.10 763 1045 2.6E-41 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB34_03760 37c40f2663db372109c028ab4170f27b 1052 Pfam PF13524 Glycosyl transferases group 1 677 746 7.8E-10 T 11-10-2018 DB34_03760 37c40f2663db372109c028ab4170f27b 1052 Pfam PF00535 Glycosyl transferase family 2 808 917 9.6E-22 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DB34_03760 37c40f2663db372109c028ab4170f27b 1052 Gene3D G3DSA:3.40.50.2000 574 744 3.7E-18 T 11-10-2018 DB34_03760 37c40f2663db372109c028ab4170f27b 1052 SUPERFAMILY SSF53756 505 754 6.28E-18 T 11-10-2018 DB34_03760 37c40f2663db372109c028ab4170f27b 1052 SUPERFAMILY SSF53448 807 1024 6.94E-37 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB34_05660 f5a3baa473e8c92183cbbcbaa39b2932 218 Pfam PF00717 Peptidase S24-like 131 174 2.0E-5 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C DB34_05660 f5a3baa473e8c92183cbbcbaa39b2932 218 SUPERFAMILY SSF47413 1 55 2.62E-7 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DB34_05660 f5a3baa473e8c92183cbbcbaa39b2932 218 Gene3D G3DSA:1.10.260.40 1 59 5.3E-8 T 11-10-2018 DB34_05660 f5a3baa473e8c92183cbbcbaa39b2932 218 Gene3D G3DSA:2.10.109.10 97 218 1.2E-10 T 11-10-2018 DB34_05660 f5a3baa473e8c92183cbbcbaa39b2932 218 SUPERFAMILY SSF51306 84 216 1.2E-16 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily DB34_13680 3b5ac11b90bfb0764292198f24422310 112 Gene3D G3DSA:1.10.10.160 15 47 1.4E-22 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily DB34_13680 3b5ac11b90bfb0764292198f24422310 112 SUPERFAMILY SSF52540 24 111 9.35E-19 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_13680 3b5ac11b90bfb0764292198f24422310 112 Pfam PF00580 UvrD/REP helicase N-terminal domain 21 111 2.6E-20 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 DB34_13680 3b5ac11b90bfb0764292198f24422310 112 Gene3D G3DSA:3.40.50.300 48 111 1.4E-22 T 11-10-2018 DB34_01880 330961dcfeedb33db34a9725f97a0468 204 Gene3D G3DSA:3.40.50.1240 1 179 2.1E-33 T 11-10-2018 IPR029033 Histidine phosphatase superfamily DB34_01880 330961dcfeedb33db34a9725f97a0468 204 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 163 3.0E-31 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DB34_01880 330961dcfeedb33db34a9725f97a0468 204 SUPERFAMILY SSF53254 6 165 8.14E-31 T 11-10-2018 IPR029033 Histidine phosphatase superfamily DB34_01880 330961dcfeedb33db34a9725f97a0468 204 PIRSF PIRSF000709 30 167 4.8E-7 T 11-10-2018 DB34_01880 330961dcfeedb33db34a9725f97a0468 204 SMART SM00855 5 153 2.3E-7 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DB34_00735 31d230dae609bbc0cdd0a48208d1fa2a 225 SUPERFAMILY SSF52172 1 180 2.56E-35 T 11-10-2018 IPR011006 CheY-like superfamily DB34_00735 31d230dae609bbc0cdd0a48208d1fa2a 225 Gene3D G3DSA:3.40.50.2300 1 118 8.0E-36 T 11-10-2018 DB34_00735 31d230dae609bbc0cdd0a48208d1fa2a 225 Gene3D G3DSA:1.10.10.10 119 225 2.9E-35 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB34_00735 31d230dae609bbc0cdd0a48208d1fa2a 225 SMART SM00862 148 223 1.6E-28 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DB34_00735 31d230dae609bbc0cdd0a48208d1fa2a 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 223 4.3E-28 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DB34_00735 31d230dae609bbc0cdd0a48208d1fa2a 225 SMART SM00448 1 113 4.5E-37 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB34_00735 31d230dae609bbc0cdd0a48208d1fa2a 225 Pfam PF00072 Response regulator receiver domain 3 113 3.6E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB34_02260 c877293c0f86a3f6b0cb97f63d18c8b1 568 SUPERFAMILY SSF51556 130 568 1.86E-197 T 11-10-2018 IPR032466 Metal-dependent hydrolase DB34_02260 c877293c0f86a3f6b0cb97f63d18c8b1 568 Gene3D G3DSA:3.20.20.140 130 549 7.5E-296 T 11-10-2018 DB34_02260 c877293c0f86a3f6b0cb97f63d18c8b1 568 Pfam PF00449 Urease alpha-subunit, N-terminal domain 3 120 6.4E-55 T 11-10-2018 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DB34_02260 c877293c0f86a3f6b0cb97f63d18c8b1 568 ProSitePatterns PS01120 Urease nickel ligands signature. 128 141 - T 11-10-2018 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DB34_02260 c877293c0f86a3f6b0cb97f63d18c8b1 568 Pfam PF01979 Amidohydrolase family 126 450 2.9E-77 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 DB34_02260 c877293c0f86a3f6b0cb97f63d18c8b1 568 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 4 568 3.4E-296 T 11-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DB34_02260 c877293c0f86a3f6b0cb97f63d18c8b1 568 SUPERFAMILY SSF51338 410 477 2.94E-6 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DB34_02260 c877293c0f86a3f6b0cb97f63d18c8b1 568 Gene3D G3DSA:2.30.40.10 2 480 7.5E-296 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DB34_02260 c877293c0f86a3f6b0cb97f63d18c8b1 568 ProSitePatterns PS00145 Urease active site. 318 334 - T 11-10-2018 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DB34_02260 c877293c0f86a3f6b0cb97f63d18c8b1 568 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 427 440 9.9E-34 T 11-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DB34_02260 c877293c0f86a3f6b0cb97f63d18c8b1 568 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 296 313 9.9E-34 T 11-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DB34_02260 c877293c0f86a3f6b0cb97f63d18c8b1 568 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 401 416 9.9E-34 T 11-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DB34_02260 c877293c0f86a3f6b0cb97f63d18c8b1 568 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 335 351 9.9E-34 T 11-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DB34_02260 c877293c0f86a3f6b0cb97f63d18c8b1 568 SUPERFAMILY SSF51338 2 178 1.03E-60 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DB34_02260 c877293c0f86a3f6b0cb97f63d18c8b1 568 Hamap MF_01953 Urease subunit alpha [ureC]. 2 568 56.403 T 11-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DB34_09605 9b889fc8a5b8a77a080b4b7f618bad02 420 Pfam PF10282 Lactonase, 7-bladed beta-propeller 50 415 5.8E-105 T 11-10-2018 IPR019405 Lactonase, 7-bladed beta propeller DB34_09605 9b889fc8a5b8a77a080b4b7f618bad02 420 SUPERFAMILY SSF51004 62 415 8.76E-47 T 11-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily DB34_09605 9b889fc8a5b8a77a080b4b7f618bad02 420 Gene3D G3DSA:2.130.10.10 44 418 1.1E-102 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 DB34_10005 dba073fb7ea1fd668c9997f7f3c80c20 255 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 11-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DB34_10005 dba073fb7ea1fd668c9997f7f3c80c20 255 Gene3D G3DSA:3.30.200.20 7 235 2.2E-96 T 11-10-2018 DB34_10005 dba073fb7ea1fd668c9997f7f3c80c20 255 Pfam PF01259 SAICAR synthetase 7 235 4.8E-61 T 11-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DB34_10005 dba073fb7ea1fd668c9997f7f3c80c20 255 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 4 237 7.0E-68 T 11-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 DB34_10005 dba073fb7ea1fd668c9997f7f3c80c20 255 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 11-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DB34_10005 dba073fb7ea1fd668c9997f7f3c80c20 255 Gene3D G3DSA:3.30.470.20 85 224 2.2E-96 T 11-10-2018 DB34_10005 dba073fb7ea1fd668c9997f7f3c80c20 255 SUPERFAMILY SSF56104 4 236 4.58E-78 T 11-10-2018 DB34_10005 dba073fb7ea1fd668c9997f7f3c80c20 255 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 238 32.514 T 11-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DB34_03410 4f9999500e8416d95ca726e7e25a7c35 195 SMART SM00857 9 148 1.5E-53 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 DB34_03410 4f9999500e8416d95ca726e7e25a7c35 195 Pfam PF00239 Resolvase, N terminal domain 9 148 5.5E-43 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 DB34_03410 4f9999500e8416d95ca726e7e25a7c35 195 Gene3D G3DSA:1.10.10.60 150 192 2.7E-10 T 11-10-2018 DB34_03410 4f9999500e8416d95ca726e7e25a7c35 195 SUPERFAMILY SSF46689 150 191 1.03E-5 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB34_03410 4f9999500e8416d95ca726e7e25a7c35 195 Gene3D G3DSA:3.40.50.1390 8 136 2.2E-40 T 11-10-2018 DB34_03410 4f9999500e8416d95ca726e7e25a7c35 195 SUPERFAMILY SSF53041 9 148 4.84E-41 T 11-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 DB34_03410 4f9999500e8416d95ca726e7e25a7c35 195 Pfam PF02796 Helix-turn-helix domain of resolvase 150 192 3.7E-11 T 11-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 DB34_10055 f2074ecf7a3f66c77282ce55708ba1c6 415 Gene3D G3DSA:2.40.50.100 1 102 9.3E-34 T 11-10-2018 DB34_10055 f2074ecf7a3f66c77282ce55708ba1c6 415 SUPERFAMILY SSF52777 187 414 4.23E-80 T 11-10-2018 DB34_10055 f2074ecf7a3f66c77282ce55708ba1c6 415 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 186 414 1.1E-83 T 11-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 DB34_10055 f2074ecf7a3f66c77282ce55708ba1c6 415 TIGRFAM TIGR01349 PDHac_trf_mito: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase 4 415 1.7E-158 T 11-10-2018 IPR006257 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex GO:0004742|GO:0006090|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-70268 DB34_10055 f2074ecf7a3f66c77282ce55708ba1c6 415 Gene3D G3DSA:4.10.320.10 117 170 8.8E-20 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 DB34_10055 f2074ecf7a3f66c77282ce55708ba1c6 415 SUPERFAMILY SSF47005 127 168 3.66E-13 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 DB34_10055 f2074ecf7a3f66c77282ce55708ba1c6 415 SUPERFAMILY SSF51230 1 95 1.19E-28 T 11-10-2018 IPR011053 Single hybrid motif DB34_10055 f2074ecf7a3f66c77282ce55708ba1c6 415 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 DB34_10055 f2074ecf7a3f66c77282ce55708ba1c6 415 Gene3D G3DSA:3.30.559.10 172 412 2.9E-92 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 DB34_10055 f2074ecf7a3f66c77282ce55708ba1c6 415 Pfam PF00364 Biotin-requiring enzyme 4 77 1.2E-19 T 11-10-2018 IPR000089 Biotin/lipoyl attachment DB34_10055 f2074ecf7a3f66c77282ce55708ba1c6 415 Pfam PF02817 e3 binding domain 129 164 6.0E-18 T 11-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 DB34_06645 5b967e830b61da68c6a87b3483024c5f 738 Gene3D G3DSA:2.40.170.20 195 737 1.4E-112 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DB34_06645 5b967e830b61da68c6a87b3483024c5f 738 Pfam PF07715 TonB-dependent Receptor Plug Domain 82 184 3.8E-19 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain DB34_06645 5b967e830b61da68c6a87b3483024c5f 738 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 83 734 1.1E-88 T 11-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 DB34_06645 5b967e830b61da68c6a87b3483024c5f 738 Gene3D G3DSA:2.170.130.10 59 191 3.0E-32 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily DB34_06645 5b967e830b61da68c6a87b3483024c5f 738 SUPERFAMILY SSF56935 54 738 1.1E-115 T 11-10-2018 DB34_06645 5b967e830b61da68c6a87b3483024c5f 738 Pfam PF00593 TonB dependent receptor 264 737 2.8E-43 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel DB34_03045 b7e67b5f215784028301cc165c5db20e 428 Gene3D G3DSA:3.40.640.10 59 317 7.8E-148 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB34_03045 b7e67b5f215784028301cc165c5db20e 428 PIRSF PIRSF000521 123 425 1.9E-33 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DB34_03045 b7e67b5f215784028301cc165c5db20e 428 PIRSF PIRSF000521 25 129 9.2E-4 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DB34_03045 b7e67b5f215784028301cc165c5db20e 428 Gene3D G3DSA:3.90.1150.10 5 420 7.8E-148 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB34_03045 b7e67b5f215784028301cc165c5db20e 428 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 235 272 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DB34_03045 b7e67b5f215784028301cc165c5db20e 428 SUPERFAMILY SSF53383 20 422 4.49E-123 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB34_03045 b7e67b5f215784028301cc165c5db20e 428 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 10 422 7.8E-168 T 11-10-2018 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 DB34_03045 b7e67b5f215784028301cc165c5db20e 428 Pfam PF00202 Aminotransferase class-III 22 422 5.5E-119 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DB34_08820 cc0eb764fc0352d8b1e0cfeaded78b38 210 Pfam PF01351 Ribonuclease HII 15 195 5.0E-39 T 11-10-2018 IPR024567 Ribonuclease HII/HIII domain DB34_08820 cc0eb764fc0352d8b1e0cfeaded78b38 210 Hamap MF_00052_B Ribonuclease HII [rnhB]. 13 196 35.389 T 11-10-2018 IPR022898 Ribonuclease HII GO:0004523 DB34_08820 cc0eb764fc0352d8b1e0cfeaded78b38 210 Gene3D G3DSA:3.30.420.10 4 210 1.8E-67 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DB34_08820 cc0eb764fc0352d8b1e0cfeaded78b38 210 SUPERFAMILY SSF53098 13 204 6.98E-62 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily DB34_01115 d8386f1a9420408d873170fd54a39d17 333 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 2 312 2.4E-89 T 11-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B DB34_01115 d8386f1a9420408d873170fd54a39d17 333 SMART SM00797 23 306 1.9E-123 T 11-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B DB34_01115 d8386f1a9420408d873170fd54a39d17 333 SUPERFAMILY SSF50891 183 295 2.84E-8 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily DB34_01115 d8386f1a9420408d873170fd54a39d17 333 Gene3D G3DSA:2.40.100.10 179 315 3.5E-44 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily DB34_01115 d8386f1a9420408d873170fd54a39d17 333 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 24 289 3.4E-82 T 11-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B DB34_08595 b4e174f2bf14282d4034144b70a14959 172 SUPERFAMILY SSF160369 2 167 1.83E-52 T 11-10-2018 DB34_08595 b4e174f2bf14282d4034144b70a14959 172 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 1 158 24.39 T 11-10-2018 IPR022973 Ribosomal protein L10 DB34_08595 b4e174f2bf14282d4034144b70a14959 172 ProSitePatterns PS01109 Ribosomal protein L10 signature. 6 40 - T 11-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_08595 b4e174f2bf14282d4034144b70a14959 172 Gene3D G3DSA:3.30.70.1730 1 130 5.4E-37 T 11-10-2018 DB34_08595 b4e174f2bf14282d4034144b70a14959 172 Pfam PF00466 Ribosomal protein L10 2 98 4.1E-23 T 11-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 DB34_02090 294433e83c3a7a3f9dc38c09a75c98a3 951 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 23 372 4.2E-76 T 11-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 DB34_02090 294433e83c3a7a3f9dc38c09a75c98a3 951 PRINTS PR00662 Glucose-6-phosphate isomerase signature 651 672 2.5E-8 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB34_02090 294433e83c3a7a3f9dc38c09a75c98a3 951 PRINTS PR00662 Glucose-6-phosphate isomerase signature 464 483 2.5E-8 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB34_02090 294433e83c3a7a3f9dc38c09a75c98a3 951 PRINTS PR00662 Glucose-6-phosphate isomerase signature 575 593 2.5E-8 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB34_02090 294433e83c3a7a3f9dc38c09a75c98a3 951 SUPERFAMILY SSF51569 12 376 1.34E-67 T 11-10-2018 DB34_02090 294433e83c3a7a3f9dc38c09a75c98a3 951 Pfam PF00342 Phosphoglucose isomerase 461 673 6.0E-17 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB34_02090 294433e83c3a7a3f9dc38c09a75c98a3 951 Gene3D G3DSA:3.40.50.10490 694 786 2.2E-9 T 11-10-2018 DB34_02090 294433e83c3a7a3f9dc38c09a75c98a3 951 Hamap MF_00493 Transaldolase [tal]. 1 383 121.144 T 11-10-2018 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 DB34_02090 294433e83c3a7a3f9dc38c09a75c98a3 951 SUPERFAMILY SSF53697 310 788 4.65E-78 T 11-10-2018 DB34_02090 294433e83c3a7a3f9dc38c09a75c98a3 951 Gene3D G3DSA:3.40.50.10490 608 685 3.8E-5 T 11-10-2018 DB34_02090 294433e83c3a7a3f9dc38c09a75c98a3 951 TIGRFAM TIGR00876 tal_mycobact: transaldolase 21 371 2.2E-92 T 11-10-2018 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 DB34_02090 294433e83c3a7a3f9dc38c09a75c98a3 951 ProSitePatterns PS01054 Transaldolase signature 1. 48 56 - T 11-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 DB34_02090 294433e83c3a7a3f9dc38c09a75c98a3 951 Gene3D G3DSA:3.20.20.70 8 374 4.0E-141 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB34_02090 294433e83c3a7a3f9dc38c09a75c98a3 951 Gene3D G3DSA:3.40.50.10490 428 600 1.5E-44 T 11-10-2018 DB34_04470 0ddda6f7a6bcdb624eae95e5aec1a1c2 308 Gene3D G3DSA:1.10.287.90 27 111 1.3E-29 T 11-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB34_04470 0ddda6f7a6bcdb624eae95e5aec1a1c2 308 SUPERFAMILY SSF49503 122 280 4.32E-51 T 11-10-2018 IPR008972 Cupredoxin DB34_04470 0ddda6f7a6bcdb624eae95e5aec1a1c2 308 Gene3D G3DSA:2.60.40.420 112 281 3.6E-57 T 11-10-2018 IPR008972 Cupredoxin DB34_04470 0ddda6f7a6bcdb624eae95e5aec1a1c2 308 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 149 220 5.3E-7 T 11-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB34_04470 0ddda6f7a6bcdb624eae95e5aec1a1c2 308 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 15 239 2.3E-105 T 11-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 DB34_04470 0ddda6f7a6bcdb624eae95e5aec1a1c2 308 SUPERFAMILY SSF81464 27 116 9.32E-22 T 11-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB34_04470 0ddda6f7a6bcdb624eae95e5aec1a1c2 308 PIRSF PIRSF000292 1 308 4.4E-130 T 11-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 DB34_04470 0ddda6f7a6bcdb624eae95e5aec1a1c2 308 Pfam PF06481 COX Aromatic Rich Motif 239 284 3.4E-18 T 11-10-2018 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 DB34_04470 0ddda6f7a6bcdb624eae95e5aec1a1c2 308 PRINTS PR01166 Cytochrome c oxidase subunit II signature 85 105 2.3E-5 T 11-10-2018 DB34_04470 0ddda6f7a6bcdb624eae95e5aec1a1c2 308 PRINTS PR01166 Cytochrome c oxidase subunit II signature 190 207 2.3E-5 T 11-10-2018 DB34_04470 0ddda6f7a6bcdb624eae95e5aec1a1c2 308 PRINTS PR01166 Cytochrome c oxidase subunit II signature 146 167 2.3E-5 T 11-10-2018 DB34_04470 0ddda6f7a6bcdb624eae95e5aec1a1c2 308 PRINTS PR01166 Cytochrome c oxidase subunit II signature 170 190 2.3E-5 T 11-10-2018 DB34_04265 469f9939280242fb8a6b1aa19b31abc3 665 Gene3D G3DSA:3.40.50.300 60 229 4.6E-100 T 11-10-2018 DB34_04265 469f9939280242fb8a6b1aa19b31abc3 665 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 292 432 7.0E-48 T 11-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 DB34_04265 469f9939280242fb8a6b1aa19b31abc3 665 Pfam PF13177 DNA polymerase III, delta subunit 67 229 3.5E-39 T 11-10-2018 DB34_04265 469f9939280242fb8a6b1aa19b31abc3 665 Gene3D G3DSA:1.10.8.60 55 287 4.6E-100 T 11-10-2018 DB34_04265 469f9939280242fb8a6b1aa19b31abc3 665 SUPERFAMILY SSF48019 301 427 1.36E-29 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 DB34_04265 469f9939280242fb8a6b1aa19b31abc3 665 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 50 417 3.8E-121 T 11-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 DB34_04265 469f9939280242fb8a6b1aa19b31abc3 665 SUPERFAMILY SSF52540 50 283 5.64E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_04265 469f9939280242fb8a6b1aa19b31abc3 665 Gene3D G3DSA:1.20.272.10 300 420 3.3E-16 T 11-10-2018 DB34_04265 469f9939280242fb8a6b1aa19b31abc3 665 Pfam PF12362 DNA polymerase III gamma and tau subunits C terminal 509 622 1.8E-32 T 11-10-2018 IPR022107 DNA polymerase III, subunit gamma/ tau, C-terminal DB34_04265 469f9939280242fb8a6b1aa19b31abc3 665 SMART SM00382 84 231 1.5E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_10390 e82340dff6a8a250e67f82920cbf3bf2 413 PIRSF PIRSF000524 12 412 1.5E-110 T 11-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 DB34_10390 e82340dff6a8a250e67f82920cbf3bf2 413 SUPERFAMILY SSF53383 11 394 1.1E-91 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB34_10390 e82340dff6a8a250e67f82920cbf3bf2 413 Gene3D G3DSA:3.40.640.10 30 291 1.1E-132 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB34_10390 e82340dff6a8a250e67f82920cbf3bf2 413 Gene3D G3DSA:3.90.1150.10 19 388 1.1E-132 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB34_10390 e82340dff6a8a250e67f82920cbf3bf2 413 Pfam PF00266 Aminotransferase class-V 21 357 4.8E-26 T 11-10-2018 IPR000192 Aminotransferase class V domain DB34_09930 b18f9fab1ede9bcec3d43ab6a1c927d2 419 SUPERFAMILY SSF51735 111 298 3.72E-56 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily DB34_09930 b18f9fab1ede9bcec3d43ab6a1c927d2 419 Gene3D G3DSA:3.30.70.260 331 415 1.5E-24 T 11-10-2018 DB34_09930 b18f9fab1ede9bcec3d43ab6a1c927d2 419 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 232 248 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site DB34_09930 b18f9fab1ede9bcec3d43ab6a1c927d2 419 Gene3D G3DSA:3.40.50.720 112 300 5.1E-109 T 11-10-2018 DB34_09930 b18f9fab1ede9bcec3d43ab6a1c927d2 419 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 16 324 5.3E-34 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 DB34_09930 b18f9fab1ede9bcec3d43ab6a1c927d2 419 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 121 297 1.0E-52 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 DB34_09930 b18f9fab1ede9bcec3d43ab6a1c927d2 419 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 157 184 - T 11-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 DB34_09930 b18f9fab1ede9bcec3d43ab6a1c927d2 419 Gene3D G3DSA:3.40.50.720 17 315 5.1E-109 T 11-10-2018 DB34_09930 b18f9fab1ede9bcec3d43ab6a1c927d2 419 SUPERFAMILY SSF55021 335 415 1.51E-12 T 11-10-2018 DB34_09930 b18f9fab1ede9bcec3d43ab6a1c927d2 419 SUPERFAMILY SSF52283 11 134 4.68E-46 T 11-10-2018 DB34_09930 b18f9fab1ede9bcec3d43ab6a1c927d2 419 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 203 225 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site DB34_05195 f0885d49d4f4388baf1145fe5bdd5c8b 195 SUPERFAMILY SSF100950 20 194 1.53E-41 T 11-10-2018 IPR037171 NagB/RpiA transferase-like DB34_05195 f0885d49d4f4388baf1145fe5bdd5c8b 195 PIRSF PIRSF006806 15 191 6.0E-25 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase DB34_05195 f0885d49d4f4388baf1145fe5bdd5c8b 195 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 20 188 2.0E-24 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase DB34_05195 f0885d49d4f4388baf1145fe5bdd5c8b 195 Gene3D G3DSA:3.40.50.10420 18 195 2.8E-42 T 11-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily DB34_05195 f0885d49d4f4388baf1145fe5bdd5c8b 195 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 20 188 2.7E-39 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase DB34_05995 bf74a9b710644d5c091bb9859d3e12f9 200 Gene3D G3DSA:3.40.50.1240 7 196 3.8E-40 T 11-10-2018 IPR029033 Histidine phosphatase superfamily DB34_05995 bf74a9b710644d5c091bb9859d3e12f9 200 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 11 168 4.6E-34 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DB34_05995 bf74a9b710644d5c091bb9859d3e12f9 200 SMART SM00855 8 164 9.6E-18 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DB34_05995 bf74a9b710644d5c091bb9859d3e12f9 200 SUPERFAMILY SSF53254 10 196 1.07E-38 T 11-10-2018 IPR029033 Histidine phosphatase superfamily DB34_12780 d70557355a27b4f0c5cad6e5bbe8d902 465 SMART SM00564 179 210 4.3 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat DB34_12780 d70557355a27b4f0c5cad6e5bbe8d902 465 SMART SM00564 315 346 1.1 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat DB34_12780 d70557355a27b4f0c5cad6e5bbe8d902 465 SMART SM00564 353 384 510.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat DB34_12780 d70557355a27b4f0c5cad6e5bbe8d902 465 SMART SM00564 264 295 62.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat DB34_12780 d70557355a27b4f0c5cad6e5bbe8d902 465 SMART SM00564 219 250 1.2E-5 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat DB34_12780 d70557355a27b4f0c5cad6e5bbe8d902 465 SUPERFAMILY SSF50998 72 457 1.1E-63 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily DB34_12780 d70557355a27b4f0c5cad6e5bbe8d902 465 Gene3D G3DSA:2.130.10.10 92 464 1.8E-71 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 DB34_12780 d70557355a27b4f0c5cad6e5bbe8d902 465 Pfam PF13360 PQQ-like domain 146 382 6.5E-45 T 11-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat DB34_02520 3a543b89c6c73eed88ec930b96dc5a3b 290 Gene3D G3DSA:3.40.50.150 54 288 1.2E-70 T 11-10-2018 DB34_02520 3a543b89c6c73eed88ec930b96dc5a3b 290 TIGRFAM TIGR00417 speE: spermidine synthase 5 280 1.1E-89 T 11-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 DB34_02520 3a543b89c6c73eed88ec930b96dc5a3b 290 Gene3D G3DSA:2.30.140.10 1 53 5.8E-19 T 11-10-2018 IPR037163 Spermidine synthase, tetramerisation domain superfamily KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 DB34_02520 3a543b89c6c73eed88ec930b96dc5a3b 290 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 4 286 36.436 T 11-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 DB34_02520 3a543b89c6c73eed88ec930b96dc5a3b 290 SUPERFAMILY SSF53335 4 285 8.88E-83 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB34_02520 3a543b89c6c73eed88ec930b96dc5a3b 290 Pfam PF01564 Spermine/spermidine synthase domain 59 239 2.0E-54 T 11-10-2018 DB34_02520 3a543b89c6c73eed88ec930b96dc5a3b 290 Pfam PF17284 Spermidine synthase tetramerisation domain 5 56 4.4E-13 T 11-10-2018 IPR035246 Spermidine synthase, tetramerisation domain KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 DB34_07470 0461d3507e6f6834f22ce8044f686708 391 SUPERFAMILY SSF55031 196 303 1.39E-25 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain DB34_07470 0461d3507e6f6834f22ce8044f686708 391 SUPERFAMILY SSF53187 16 387 3.93E-60 T 11-10-2018 DB34_07470 0461d3507e6f6834f22ce8044f686708 391 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 115 152 - T 11-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 DB34_07470 0461d3507e6f6834f22ce8044f686708 391 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 16 391 48.555 T 11-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 DB34_07470 0461d3507e6f6834f22ce8044f686708 391 Gene3D G3DSA:3.30.70.360 196 309 9.7E-114 T 11-10-2018 DB34_07470 0461d3507e6f6834f22ce8044f686708 391 Gene3D G3DSA:3.40.630.10 22 378 9.7E-114 T 11-10-2018 DB34_07470 0461d3507e6f6834f22ce8044f686708 391 Pfam PF01546 Peptidase family M20/M25/M40 82 387 4.3E-41 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 DB34_07470 0461d3507e6f6834f22ce8044f686708 391 Pfam PF07687 Peptidase dimerisation domain 192 298 1.8E-22 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain DB34_07470 0461d3507e6f6834f22ce8044f686708 391 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 21 387 5.9E-131 T 11-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 DB34_00775 11671f64fb57aa1850237e27c842cb2a 271 Pfam PF01513 ATP-NAD kinase 28 218 4.7E-17 T 11-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 DB34_00775 11671f64fb57aa1850237e27c842cb2a 271 Gene3D G3DSA:2.60.200.30 112 257 3.1E-23 T 11-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 DB34_00775 11671f64fb57aa1850237e27c842cb2a 271 SUPERFAMILY SSF111331 35 256 2.62E-52 T 11-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily DB34_00775 11671f64fb57aa1850237e27c842cb2a 271 Gene3D G3DSA:3.40.50.10330 15 107 3.1E-10 T 11-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 DB34_02510 dfac41a656ad2308616911280f503772 121 Gene3D G3DSA:2.40.50.100 1 121 3.6E-45 T 11-10-2018 DB34_02510 dfac41a656ad2308616911280f503772 121 SUPERFAMILY SSF51230 3 120 2.93E-41 T 11-10-2018 IPR011053 Single hybrid motif DB34_02510 dfac41a656ad2308616911280f503772 121 Pfam PF01597 Glycine cleavage H-protein 3 119 2.7E-42 T 11-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate DB34_02510 dfac41a656ad2308616911280f503772 121 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 2 121 35.847 T 11-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 DB34_02510 dfac41a656ad2308616911280f503772 121 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 43 72 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 DB34_02510 dfac41a656ad2308616911280f503772 121 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 119 1.3E-42 T 11-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 DB34_08390 7e8079fd8af5b51a114c80f0b6a85496 316 Pfam PF02470 MlaD protein 57 132 9.9E-10 T 11-10-2018 IPR003399 Mce/MlaD DB34_10960 f4e59c266e4bef2e0016d39723ad1141 482 Gene3D G3DSA:1.10.40.30 423 481 6.8E-23 T 11-10-2018 DB34_10960 f4e59c266e4bef2e0016d39723ad1141 482 Pfam PF10415 Fumarase C C-terminus 423 476 6.3E-20 T 11-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DB34_10960 f4e59c266e4bef2e0016d39723ad1141 482 PRINTS PR00149 Fumarate lyase superfamily signature 149 167 2.6E-30 T 11-10-2018 IPR000362 Fumarate lyase family DB34_10960 f4e59c266e4bef2e0016d39723ad1141 482 PRINTS PR00149 Fumarate lyase superfamily signature 195 213 2.6E-30 T 11-10-2018 IPR000362 Fumarate lyase family DB34_10960 f4e59c266e4bef2e0016d39723ad1141 482 PRINTS PR00149 Fumarate lyase superfamily signature 332 348 2.6E-30 T 11-10-2018 IPR000362 Fumarate lyase family DB34_10960 f4e59c266e4bef2e0016d39723ad1141 482 PRINTS PR00149 Fumarate lyase superfamily signature 286 313 2.6E-30 T 11-10-2018 IPR000362 Fumarate lyase family DB34_10960 f4e59c266e4bef2e0016d39723ad1141 482 Gene3D G3DSA:1.20.200.10 154 422 3.8E-107 T 11-10-2018 DB34_10960 f4e59c266e4bef2e0016d39723ad1141 482 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 19 476 1.3E-209 T 11-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DB34_10960 f4e59c266e4bef2e0016d39723ad1141 482 Gene3D G3DSA:1.10.275.10 20 153 3.5E-55 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal DB34_10960 f4e59c266e4bef2e0016d39723ad1141 482 ProSitePatterns PS00163 Fumarate lyases signature. 332 341 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 DB34_10960 f4e59c266e4bef2e0016d39723ad1141 482 PRINTS PR00145 Argininosuccinate lyase family signature 332 348 7.1E-7 T 11-10-2018 DB34_10960 f4e59c266e4bef2e0016d39723ad1141 482 PRINTS PR00145 Argininosuccinate lyase family signature 148 170 7.1E-7 T 11-10-2018 DB34_10960 f4e59c266e4bef2e0016d39723ad1141 482 PRINTS PR00145 Argininosuccinate lyase family signature 190 210 7.1E-7 T 11-10-2018 DB34_10960 f4e59c266e4bef2e0016d39723ad1141 482 Pfam PF00206 Lyase 27 357 3.1E-102 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal DB34_10960 f4e59c266e4bef2e0016d39723ad1141 482 SUPERFAMILY SSF48557 20 476 1.73E-144 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 DB34_10960 f4e59c266e4bef2e0016d39723ad1141 482 Hamap MF_00743 Fumarate hydratase class II [fumC]. 19 477 81.958 T 11-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DB34_12745 6254bd5101e9e23d54341886260d90ec 453 Gene3D G3DSA:1.10.3710.10 359 453 2.8E-33 T 11-10-2018 DB34_12745 6254bd5101e9e23d54341886260d90ec 453 Pfam PF12002 MgsA AAA+ ATPase C terminal 281 446 8.6E-72 T 11-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal DB34_12745 6254bd5101e9e23d54341886260d90ec 453 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 76 184 1.6E-14 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DB34_12745 6254bd5101e9e23d54341886260d90ec 453 Gene3D G3DSA:1.20.272.10 254 358 1.0E-46 T 11-10-2018 DB34_12745 6254bd5101e9e23d54341886260d90ec 453 Gene3D G3DSA:3.40.50.300 26 186 1.2E-42 T 11-10-2018 DB34_12745 6254bd5101e9e23d54341886260d90ec 453 Pfam PF16193 AAA C-terminal domain 207 280 2.5E-19 T 11-10-2018 IPR032423 AAA C-terminal domain DB34_12745 6254bd5101e9e23d54341886260d90ec 453 SUPERFAMILY SSF48019 266 450 1.36E-76 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 DB34_12745 6254bd5101e9e23d54341886260d90ec 453 SUPERFAMILY SSF52540 35 244 1.53E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_12745 6254bd5101e9e23d54341886260d90ec 453 SMART SM00382 72 188 6.5E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_07920 457cd4260bac9001d0a53a82915e2698 430 Pfam PF01979 Amidohydrolase family 55 424 1.5E-17 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 DB34_07920 457cd4260bac9001d0a53a82915e2698 430 Gene3D G3DSA:3.20.20.140 60 371 6.6E-117 T 11-10-2018 DB34_07920 457cd4260bac9001d0a53a82915e2698 430 SUPERFAMILY SSF51338 1 429 1.44E-23 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DB34_07920 457cd4260bac9001d0a53a82915e2698 430 Gene3D G3DSA:2.30.40.10 10 422 6.6E-117 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DB34_07920 457cd4260bac9001d0a53a82915e2698 430 SUPERFAMILY SSF51556 59 367 2.04E-90 T 11-10-2018 IPR032466 Metal-dependent hydrolase DB34_07920 457cd4260bac9001d0a53a82915e2698 430 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 24 427 4.0E-100 T 11-10-2018 DB34_02300 238feac134e2f64fc7208573b006c038 341 Pfam PF13387 Domain of unknown function (DUF4105) 126 265 2.6E-39 T 11-10-2018 IPR025178 Domain of unknown function DUF4105 DB34_03785 a49af66de04880d7771f2f5ee974c423 441 SUPERFAMILY SSF51366 202 439 9.42E-75 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 DB34_03785 a49af66de04880d7771f2f5ee974c423 441 SUPERFAMILY SSF55729 12 170 9.78E-26 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase DB34_03785 a49af66de04880d7771f2f5ee974c423 441 Gene3D G3DSA:3.40.630.30 11 175 1.6E-25 T 11-10-2018 DB34_03785 a49af66de04880d7771f2f5ee974c423 441 Pfam PF00583 Acetyltransferase (GNAT) family 40 146 1.4E-12 T 11-10-2018 IPR000182 GNAT domain DB34_03785 a49af66de04880d7771f2f5ee974c423 441 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 201 439 35.817 T 11-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 DB34_03785 a49af66de04880d7771f2f5ee974c423 441 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 202 435 5.5E-80 T 11-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 DB34_03785 a49af66de04880d7771f2f5ee974c423 441 Gene3D G3DSA:3.20.20.70 202 441 2.6E-86 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB34_03785 a49af66de04880d7771f2f5ee974c423 441 Pfam PF00977 Histidine biosynthesis protein 202 432 5.9E-79 T 11-10-2018 IPR006062 Histidine biosynthesis GO:0000105 DB34_00520 266c1ec0ce3db7d320cbca892597e34c 571 ProSitePatterns PS00079 Multicopper oxidases signature 1. 144 164 - T 11-10-2018 IPR033138 Multicopper oxidases, conserved site DB34_00520 266c1ec0ce3db7d320cbca892597e34c 571 ProSitePatterns PS00080 Multicopper oxidases signature 2. 553 564 - T 11-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 DB34_00520 266c1ec0ce3db7d320cbca892597e34c 571 SUPERFAMILY SSF49503 421 570 6.48E-36 T 11-10-2018 IPR008972 Cupredoxin DB34_00520 266c1ec0ce3db7d320cbca892597e34c 571 Gene3D G3DSA:2.60.40.420 439 571 4.9E-29 T 11-10-2018 IPR008972 Cupredoxin DB34_00520 266c1ec0ce3db7d320cbca892597e34c 571 TIGRFAM TIGR01480 copper_res_A: copper-resistance protein, CopA family 10 570 3.0E-239 T 11-10-2018 IPR006376 Copper-resistance protein CopA GO:0005507|GO:0042597 DB34_00520 266c1ec0ce3db7d320cbca892597e34c 571 Gene3D G3DSA:2.60.40.420 36 168 6.9E-40 T 11-10-2018 IPR008972 Cupredoxin DB34_00520 266c1ec0ce3db7d320cbca892597e34c 571 Gene3D G3DSA:2.60.40.420 174 392 2.1E-38 T 11-10-2018 IPR008972 Cupredoxin DB34_00520 266c1ec0ce3db7d320cbca892597e34c 571 SUPERFAMILY SSF49503 173 390 8.25E-53 T 11-10-2018 IPR008972 Cupredoxin DB34_00520 266c1ec0ce3db7d320cbca892597e34c 571 Pfam PF07731 Multicopper oxidase 453 570 2.9E-24 T 11-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 DB34_00520 266c1ec0ce3db7d320cbca892597e34c 571 Pfam PF07732 Multicopper oxidase 58 170 5.6E-41 T 11-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 DB34_00520 266c1ec0ce3db7d320cbca892597e34c 571 Pfam PF00394 Multicopper oxidase 179 354 9.8E-29 T 11-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 DB34_00520 266c1ec0ce3db7d320cbca892597e34c 571 SUPERFAMILY SSF49503 46 198 2.33E-40 T 11-10-2018 IPR008972 Cupredoxin DB34_02060 3c48cf4921be7fed5bee58c18f1ee9b1 115 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 8 113 1.7E-32 T 11-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 DB34_02060 3c48cf4921be7fed5bee58c18f1ee9b1 115 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 8 113 22.794 T 11-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 DB34_02060 3c48cf4921be7fed5bee58c18f1ee9b1 115 SUPERFAMILY SSF103481 14 113 2.35E-9 T 11-10-2018 DB34_02500 ca985445121004562139425f91db0846 257 SUPERFAMILY SSF54001 75 190 3.24E-16 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily DB34_02500 ca985445121004562139425f91db0846 257 Pfam PF05257 CHAP domain 83 156 6.9E-9 T 11-10-2018 IPR007921 CHAP domain DB34_02500 ca985445121004562139425f91db0846 257 Gene3D G3DSA:3.90.1720.10 74 180 4.3E-13 T 11-10-2018 DB34_00860 a1f43a2758064fde156572691aff1afa 437 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 5 427 41.186 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DB34_00860 a1f43a2758064fde156572691aff1afa 437 Gene3D G3DSA:3.40.50.1980 30 232 5.2E-125 T 11-10-2018 DB34_00860 a1f43a2758064fde156572691aff1afa 437 Gene3D G3DSA:3.40.50.1980 233 349 5.2E-125 T 11-10-2018 DB34_00860 a1f43a2758064fde156572691aff1afa 437 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 229 261 - T 11-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 DB34_00860 a1f43a2758064fde156572691aff1afa 437 PRINTS PR00083 Histidinol dehydrogenase signature 229 250 2.5E-80 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DB34_00860 a1f43a2758064fde156572691aff1afa 437 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 2.5E-80 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DB34_00860 a1f43a2758064fde156572691aff1afa 437 PRINTS PR00083 Histidinol dehydrogenase signature 361 379 2.5E-80 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DB34_00860 a1f43a2758064fde156572691aff1afa 437 PRINTS PR00083 Histidinol dehydrogenase signature 251 270 2.5E-80 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DB34_00860 a1f43a2758064fde156572691aff1afa 437 PRINTS PR00083 Histidinol dehydrogenase signature 320 345 2.5E-80 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DB34_00860 a1f43a2758064fde156572691aff1afa 437 PRINTS PR00083 Histidinol dehydrogenase signature 136 162 2.5E-80 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DB34_00860 a1f43a2758064fde156572691aff1afa 437 PRINTS PR00083 Histidinol dehydrogenase signature 170 196 2.5E-80 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DB34_00860 a1f43a2758064fde156572691aff1afa 437 PRINTS PR00083 Histidinol dehydrogenase signature 200 225 2.5E-80 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DB34_00860 a1f43a2758064fde156572691aff1afa 437 Pfam PF00815 Histidinol dehydrogenase 22 427 5.2E-166 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DB34_00860 a1f43a2758064fde156572691aff1afa 437 SUPERFAMILY SSF53720 27 428 5.3E-80 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DB34_00860 a1f43a2758064fde156572691aff1afa 437 PIRSF PIRSF000099 2 430 1.2E-160 T 11-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DB34_00860 a1f43a2758064fde156572691aff1afa 437 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 426 4.8E-160 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DB34_09110 58a7ff88384a62447bb898117fe4007b 775 SMART SM01008 223 309 6.8E-18 T 11-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead DB34_09110 58a7ff88384a62447bb898117fe4007b 775 Gene3D G3DSA:3.30.365.10 594 771 6.5E-40 T 11-10-2018 DB34_09110 58a7ff88384a62447bb898117fe4007b 775 Gene3D G3DSA:3.30.365.10 363 455 9.7E-49 T 11-10-2018 DB34_09110 58a7ff88384a62447bb898117fe4007b 775 Gene3D G3DSA:3.30.365.10 341 573 9.7E-49 T 11-10-2018 DB34_09110 58a7ff88384a62447bb898117fe4007b 775 PIRSF PIRSF036389 9 768 1.5E-240 T 11-10-2018 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related DB34_09110 58a7ff88384a62447bb898117fe4007b 775 Gene3D G3DSA:3.30.365.10 60 191 5.3E-22 T 11-10-2018 DB34_09110 58a7ff88384a62447bb898117fe4007b 775 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 19 186 5.4E-13 T 11-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 DB34_09110 58a7ff88384a62447bb898117fe4007b 775 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 599 715 4.4E-18 T 11-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 DB34_09110 58a7ff88384a62447bb898117fe4007b 775 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 340 609 1.2E-30 T 11-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 DB34_09110 58a7ff88384a62447bb898117fe4007b 775 SUPERFAMILY SSF56003 29 254 2.89E-37 T 11-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 DB34_09110 58a7ff88384a62447bb898117fe4007b 775 SUPERFAMILY SSF56003 339 771 8.49E-119 T 11-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 DB34_09005 a01da9fa7995d662b38e6a9b340ab03d 109 Gene3D G3DSA:3.30.1070.10 1 83 3.0E-20 T 11-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 DB34_09005 a01da9fa7995d662b38e6a9b340ab03d 109 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 82 4.2E-20 T 11-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 DB34_09005 a01da9fa7995d662b38e6a9b340ab03d 109 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 87 16.065 T 11-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 DB34_09005 a01da9fa7995d662b38e6a9b340ab03d 109 Pfam PF03776 Septum formation topological specificity factor MinE 13 82 8.7E-22 T 11-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 DB34_09005 a01da9fa7995d662b38e6a9b340ab03d 109 SUPERFAMILY SSF55229 35 82 6.8E-12 T 11-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 DB34_12715 440e407a9c48bc0e1389eee558477925 114 Pfam PF00886 Ribosomal protein S16 9 70 2.0E-27 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_12715 440e407a9c48bc0e1389eee558477925 114 Gene3D G3DSA:3.30.1320.10 1 114 4.6E-40 T 11-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_12715 440e407a9c48bc0e1389eee558477925 114 TIGRFAM TIGR00002 S16: ribosomal protein bS16 3 82 2.2E-32 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_12715 440e407a9c48bc0e1389eee558477925 114 ProSitePatterns PS00732 Ribosomal protein S16 signature. 3 12 - T 11-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_12715 440e407a9c48bc0e1389eee558477925 114 SUPERFAMILY SSF54565 3 96 1.09E-32 T 11-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_12715 440e407a9c48bc0e1389eee558477925 114 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 80 24.764 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_04820 4c6c5bdd3fdbec460550874c656e6cab 164 SUPERFAMILY SSF46785 6 149 4.73E-33 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB34_04820 4c6c5bdd3fdbec460550874c656e6cab 164 SMART SM00347 34 135 1.4E-23 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DB34_04820 4c6c5bdd3fdbec460550874c656e6cab 164 PRINTS PR00598 Bacterial regulatory protein MarR family signature 76 91 6.1E-16 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DB34_04820 4c6c5bdd3fdbec460550874c656e6cab 164 PRINTS PR00598 Bacterial regulatory protein MarR family signature 125 145 6.1E-16 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DB34_04820 4c6c5bdd3fdbec460550874c656e6cab 164 PRINTS PR00598 Bacterial regulatory protein MarR family signature 59 75 6.1E-16 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DB34_04820 4c6c5bdd3fdbec460550874c656e6cab 164 PRINTS PR00598 Bacterial regulatory protein MarR family signature 95 111 6.1E-16 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DB34_04820 4c6c5bdd3fdbec460550874c656e6cab 164 ProSitePatterns PS01117 MarR-type HTH domain signature. 74 108 - T 11-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site DB34_04820 4c6c5bdd3fdbec460550874c656e6cab 164 Gene3D G3DSA:1.10.10.10 15 156 1.7E-34 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB34_04820 4c6c5bdd3fdbec460550874c656e6cab 164 Pfam PF01047 MarR family 57 99 7.9E-11 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DB34_04630 7ed60d8085e4860ef242ba77bb71a3b5 156 SUPERFAMILY SSF55620 26 142 3.34E-28 T 11-10-2018 DB34_04630 7ed60d8085e4860ef242ba77bb71a3b5 156 Gene3D G3DSA:3.30.1130.10 21 142 2.2E-43 T 11-10-2018 DB34_04630 7ed60d8085e4860ef242ba77bb71a3b5 156 Pfam PF14489 QueF-like protein 60 138 3.6E-34 T 11-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 DB34_04630 7ed60d8085e4860ef242ba77bb71a3b5 156 Hamap MF_00818 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 156 68.817 T 11-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 DB34_04630 7ed60d8085e4860ef242ba77bb71a3b5 156 PIRSF PIRSF027377 7 143 4.8E-54 T 11-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 DB34_04630 7ed60d8085e4860ef242ba77bb71a3b5 156 TIGRFAM TIGR03139 QueF-II: 7-cyano-7-deazaguanine reductase 25 135 3.6E-47 T 11-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 DB34_02380 d67e2781efd97c36a99a7b3cb9cf610f 307 Gene3D G3DSA:1.10.10.10 1 86 6.1E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB34_02380 d67e2781efd97c36a99a7b3cb9cf610f 307 SUPERFAMILY SSF53850 92 297 7.96E-33 T 11-10-2018 DB34_02380 d67e2781efd97c36a99a7b3cb9cf610f 307 SUPERFAMILY SSF46785 3 82 8.8E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB34_02380 d67e2781efd97c36a99a7b3cb9cf610f 307 Pfam PF03466 LysR substrate binding domain 96 296 5.4E-18 T 11-10-2018 IPR005119 LysR, substrate-binding DB34_02380 d67e2781efd97c36a99a7b3cb9cf610f 307 Gene3D G3DSA:3.40.190.10 95 293 4.0E-48 T 11-10-2018 DB34_02380 d67e2781efd97c36a99a7b3cb9cf610f 307 Gene3D G3DSA:3.40.190.10 169 269 4.0E-48 T 11-10-2018 DB34_02380 d67e2781efd97c36a99a7b3cb9cf610f 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 61 4.7E-14 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB34_00385 8b26e76c1fff7896c18e97158ad4de3c 364 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 39 364 8.2E-116 T 11-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DB34_00385 8b26e76c1fff7896c18e97158ad4de3c 364 ProSitePatterns PS01348 MraY family signature 2. 193 204 - T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DB34_00385 8b26e76c1fff7896c18e97158ad4de3c 364 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 72 84 2.4E-4 T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DB34_00385 8b26e76c1fff7896c18e97158ad4de3c 364 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 27 362 23.238 T 11-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DB34_00385 8b26e76c1fff7896c18e97158ad4de3c 364 ProSitePatterns PS01347 MraY family signature 1. 72 84 - T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DB34_00385 8b26e76c1fff7896c18e97158ad4de3c 364 Pfam PF00953 Glycosyl transferase family 4 103 288 4.4E-36 T 11-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 DB34_09205 e82b35aa069daa016f249bf0b0edf24c 720 Gene3D G3DSA:3.40.50.300 280 629 2.2E-105 T 11-10-2018 DB34_09205 e82b35aa069daa016f249bf0b0edf24c 720 Gene3D G3DSA:3.40.50.300 4 271 9.5E-95 T 11-10-2018 DB34_09205 e82b35aa069daa016f249bf0b0edf24c 720 Pfam PF13361 UvrD-like helicase C-terminal domain 276 605 1.3E-58 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 DB34_09205 e82b35aa069daa016f249bf0b0edf24c 720 Gene3D G3DSA:1.10.486.10 383 530 2.2E-105 T 11-10-2018 DB34_09205 e82b35aa069daa016f249bf0b0edf24c 720 SUPERFAMILY SSF52540 2 633 1.3E-170 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_09205 e82b35aa069daa016f249bf0b0edf24c 720 Pfam PF00580 UvrD/REP helicase N-terminal domain 4 271 7.8E-74 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 DB34_09205 e82b35aa069daa016f249bf0b0edf24c 720 Gene3D G3DSA:1.10.10.160 105 185 9.5E-95 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily DB34_06145 2cd7658ef85d7e6377c3deed1e4b23bf 309 Pfam PF03466 LysR substrate binding domain 90 288 2.1E-26 T 11-10-2018 IPR005119 LysR, substrate-binding DB34_06145 2cd7658ef85d7e6377c3deed1e4b23bf 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 6.4E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB34_06145 2cd7658ef85d7e6377c3deed1e4b23bf 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 6.4E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB34_06145 2cd7658ef85d7e6377c3deed1e4b23bf 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 6.4E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB34_06145 2cd7658ef85d7e6377c3deed1e4b23bf 309 Gene3D G3DSA:1.10.10.10 1 82 2.0E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB34_06145 2cd7658ef85d7e6377c3deed1e4b23bf 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 4.0E-20 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB34_06145 2cd7658ef85d7e6377c3deed1e4b23bf 309 Gene3D G3DSA:3.40.190.290 94 276 2.7E-34 T 11-10-2018 DB34_06145 2cd7658ef85d7e6377c3deed1e4b23bf 309 SUPERFAMILY SSF46785 4 89 5.44E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB34_06145 2cd7658ef85d7e6377c3deed1e4b23bf 309 SUPERFAMILY SSF53850 90 290 4.16E-31 T 11-10-2018 DB34_03505 e7931dae0282d87215e47d1df0e8a05d 360 Pfam PF03054 tRNA methyl transferase 1 351 1.1E-97 T 11-10-2018 DB34_03505 e7931dae0282d87215e47d1df0e8a05d 360 Gene3D G3DSA:3.40.50.620 1 208 2.2E-64 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DB34_03505 e7931dae0282d87215e47d1df0e8a05d 360 Gene3D G3DSA:2.30.30.280 214 276 1.3E-9 T 11-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 DB34_03505 e7931dae0282d87215e47d1df0e8a05d 360 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1 351 9.3E-84 T 11-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 DB34_03505 e7931dae0282d87215e47d1df0e8a05d 360 SUPERFAMILY SSF52402 1 242 1.87E-44 T 11-10-2018 DB34_03505 e7931dae0282d87215e47d1df0e8a05d 360 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 1 352 36.322 T 11-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 DB34_03505 e7931dae0282d87215e47d1df0e8a05d 360 Gene3D G3DSA:2.40.30.10 277 358 7.7E-15 T 11-10-2018 DB34_09090 97e3ea0660fa86479f1fa5b7ecbdeaaa 666 Gene3D G3DSA:3.40.50.2300 543 666 1.1E-26 T 11-10-2018 DB34_09090 97e3ea0660fa86479f1fa5b7ecbdeaaa 666 SMART SM00448 553 660 4.6E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB34_09090 97e3ea0660fa86479f1fa5b7ecbdeaaa 666 SMART SM00448 11 122 1.4E-19 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB34_09090 97e3ea0660fa86479f1fa5b7ecbdeaaa 666 PRINTS PR00344 Bacterial sensor protein C-terminal signature 482 500 6.3E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB34_09090 97e3ea0660fa86479f1fa5b7ecbdeaaa 666 PRINTS PR00344 Bacterial sensor protein C-terminal signature 451 465 6.3E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB34_09090 97e3ea0660fa86479f1fa5b7ecbdeaaa 666 PRINTS PR00344 Bacterial sensor protein C-terminal signature 469 479 6.3E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB34_09090 97e3ea0660fa86479f1fa5b7ecbdeaaa 666 PRINTS PR00344 Bacterial sensor protein C-terminal signature 506 519 6.3E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB34_09090 97e3ea0660fa86479f1fa5b7ecbdeaaa 666 Pfam PF00072 Response regulator receiver domain 555 642 1.8E-17 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB34_09090 97e3ea0660fa86479f1fa5b7ecbdeaaa 666 Pfam PF00072 Response regulator receiver domain 13 122 4.8E-13 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB34_09090 97e3ea0660fa86479f1fa5b7ecbdeaaa 666 Pfam PF00512 His Kinase A (phospho-acceptor) domain 277 339 8.3E-8 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DB34_09090 97e3ea0660fa86479f1fa5b7ecbdeaaa 666 SUPERFAMILY SSF52172 552 664 9.39E-29 T 11-10-2018 IPR011006 CheY-like superfamily DB34_09090 97e3ea0660fa86479f1fa5b7ecbdeaaa 666 SUPERFAMILY SSF55785 128 232 3.81E-13 T 11-10-2018 IPR035965 PAS domain superfamily DB34_09090 97e3ea0660fa86479f1fa5b7ecbdeaaa 666 Gene3D G3DSA:3.30.565.10 364 527 2.5E-35 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB34_09090 97e3ea0660fa86479f1fa5b7ecbdeaaa 666 Pfam PF08448 PAS fold 146 234 2.7E-9 T 11-10-2018 IPR013656 PAS fold-4 DB34_09090 97e3ea0660fa86479f1fa5b7ecbdeaaa 666 SMART SM00091 140 206 1.7E-4 T 11-10-2018 IPR000014 PAS domain DB34_09090 97e3ea0660fa86479f1fa5b7ecbdeaaa 666 SMART SM00387 401 522 2.5E-24 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB34_09090 97e3ea0660fa86479f1fa5b7ecbdeaaa 666 SUPERFAMILY SSF55874 376 520 7.86E-34 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB34_09090 97e3ea0660fa86479f1fa5b7ecbdeaaa 666 SUPERFAMILY SSF52172 11 147 2.99E-26 T 11-10-2018 IPR011006 CheY-like superfamily DB34_09090 97e3ea0660fa86479f1fa5b7ecbdeaaa 666 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 402 519 4.6E-19 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB34_09090 97e3ea0660fa86479f1fa5b7ecbdeaaa 666 Gene3D G3DSA:1.10.287.130 272 340 1.3E-18 T 11-10-2018 DB34_09090 97e3ea0660fa86479f1fa5b7ecbdeaaa 666 Gene3D G3DSA:3.40.50.2300 11 139 1.8E-23 T 11-10-2018 DB34_09090 97e3ea0660fa86479f1fa5b7ecbdeaaa 666 SMART SM00388 275 342 3.3E-8 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DB34_09090 97e3ea0660fa86479f1fa5b7ecbdeaaa 666 Gene3D G3DSA:3.30.450.20 140 271 3.3E-12 T 11-10-2018 DB34_09090 97e3ea0660fa86479f1fa5b7ecbdeaaa 666 SUPERFAMILY SSF47384 266 339 3.14E-10 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DB34_09140 d456fb78e1566a5242b1374abc321ac9 356 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 88 7.7E-21 T 11-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 DB34_09140 d456fb78e1566a5242b1374abc321ac9 356 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 9 342 44.292 T 11-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 DB34_09140 d456fb78e1566a5242b1374abc321ac9 356 Pfam PF01409 tRNA synthetases class II core domain (F) 93 340 2.4E-95 T 11-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 DB34_09140 d456fb78e1566a5242b1374abc321ac9 356 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 40 340 2.3E-96 T 11-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 DB34_09140 d456fb78e1566a5242b1374abc321ac9 356 SUPERFAMILY SSF55681 93 342 1.26E-70 T 11-10-2018 DB34_09140 d456fb78e1566a5242b1374abc321ac9 356 Gene3D G3DSA:3.30.930.10 8 344 5.9E-109 T 11-10-2018 DB34_09140 d456fb78e1566a5242b1374abc321ac9 356 SUPERFAMILY SSF46589 14 98 2.35E-17 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 DB34_10510 4ffea1526171e8fac18fa5fad1c36c63 331 SUPERFAMILY SSF53098 134 293 2.66E-36 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily DB34_10510 4ffea1526171e8fac18fa5fad1c36c63 331 Gene3D G3DSA:3.30.420.10 128 299 1.5E-28 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DB34_10510 4ffea1526171e8fac18fa5fad1c36c63 331 SUPERFAMILY SSF46689 20 110 6.45E-6 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB34_10510 4ffea1526171e8fac18fa5fad1c36c63 331 Pfam PF00665 Integrase core domain 136 249 4.1E-23 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 DB34_11740 dfdac8d990e489cd4d5361969572a966 492 SMART SM01240 11 478 0.0 T 11-10-2018 DB34_11740 dfdac8d990e489cd4d5361969572a966 492 SMART SM00116 100 149 5.4E-12 T 11-10-2018 IPR000644 CBS domain DB34_11740 dfdac8d990e489cd4d5361969572a966 492 SMART SM00116 162 210 8.1E-6 T 11-10-2018 IPR000644 CBS domain DB34_11740 dfdac8d990e489cd4d5361969572a966 492 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 12 460 1.2E-190 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 DB34_11740 dfdac8d990e489cd4d5361969572a966 492 Pfam PF00571 CBS domain 97 147 9.8E-11 T 11-10-2018 IPR000644 CBS domain DB34_11740 dfdac8d990e489cd4d5361969572a966 492 Pfam PF00571 CBS domain 154 210 1.4E-6 T 11-10-2018 IPR000644 CBS domain DB34_11740 dfdac8d990e489cd4d5361969572a966 492 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 12 491 83.493 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 DB34_11740 dfdac8d990e489cd4d5361969572a966 492 SUPERFAMILY SSF51412 9 482 1.44E-118 T 11-10-2018 DB34_11740 dfdac8d990e489cd4d5361969572a966 492 PIRSF PIRSF000130 1 492 9.2E-202 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 DB34_11740 dfdac8d990e489cd4d5361969572a966 492 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 12 478 1.0E-156 T 11-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 DB34_11740 dfdac8d990e489cd4d5361969572a966 492 SUPERFAMILY SSF54631 66 210 1.64E-31 T 11-10-2018 DB34_11740 dfdac8d990e489cd4d5361969572a966 492 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 299 311 - T 11-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 DB34_11740 dfdac8d990e489cd4d5361969572a966 492 Gene3D G3DSA:3.20.20.70 6 491 4.5E-212 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB34_12415 efc48548bbaf1ff89c7f765fd4c31f32 122 Gene3D G3DSA:2.60.300.12 18 122 6.5E-32 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 DB34_12415 efc48548bbaf1ff89c7f765fd4c31f32 122 SUPERFAMILY SSF89360 18 111 1.14E-25 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 DB34_12415 efc48548bbaf1ff89c7f765fd4c31f32 122 Pfam PF01521 Iron-sulphur cluster biosynthesis 19 118 1.7E-18 T 11-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 DB34_12415 efc48548bbaf1ff89c7f765fd4c31f32 122 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 103 120 - T 11-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 DB34_12415 efc48548bbaf1ff89c7f765fd4c31f32 122 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 19 122 3.5E-32 T 11-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 DB34_12895 b5b95092e4c4614ddfb232e419b0e551 369 SMART SM00388 137 201 1.0E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DB34_12895 b5b95092e4c4614ddfb232e419b0e551 369 Gene3D G3DSA:3.30.450.20 14 107 2.5E-5 T 11-10-2018 DB34_12895 b5b95092e4c4614ddfb232e419b0e551 369 SUPERFAMILY SSF55874 205 360 2.1E-33 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB34_12895 b5b95092e4c4614ddfb232e419b0e551 369 Gene3D G3DSA:1.10.287.130 141 196 3.4E-11 T 11-10-2018 DB34_12895 b5b95092e4c4614ddfb232e419b0e551 369 SUPERFAMILY SSF55785 15 87 4.19E-7 T 11-10-2018 IPR035965 PAS domain superfamily DB34_12895 b5b95092e4c4614ddfb232e419b0e551 369 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 241 360 1.2E-19 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB34_12895 b5b95092e4c4614ddfb232e419b0e551 369 Gene3D G3DSA:3.30.565.10 203 367 5.5E-38 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB34_12895 b5b95092e4c4614ddfb232e419b0e551 369 SUPERFAMILY SSF47384 130 195 4.71E-10 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DB34_12895 b5b95092e4c4614ddfb232e419b0e551 369 PRINTS PR00344 Bacterial sensor protein C-terminal signature 295 309 3.3E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB34_12895 b5b95092e4c4614ddfb232e419b0e551 369 PRINTS PR00344 Bacterial sensor protein C-terminal signature 324 342 3.3E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB34_12895 b5b95092e4c4614ddfb232e419b0e551 369 PRINTS PR00344 Bacterial sensor protein C-terminal signature 313 323 3.3E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB34_12895 b5b95092e4c4614ddfb232e419b0e551 369 SMART SM00091 12 79 8.3E-6 T 11-10-2018 IPR000014 PAS domain DB34_12895 b5b95092e4c4614ddfb232e419b0e551 369 SMART SM00387 241 363 7.4E-30 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB34_12895 b5b95092e4c4614ddfb232e419b0e551 369 Pfam PF00512 His Kinase A (phospho-acceptor) domain 140 192 2.7E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DB34_09195 230ff157dae2fef892ae18cf7a3ca846 593 Gene3D G3DSA:3.40.350.10 145 288 3.1E-30 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal DB34_09195 230ff157dae2fef892ae18cf7a3ca846 593 Gene3D G3DSA:3.40.350.10 1 144 2.5E-39 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal DB34_09195 230ff157dae2fef892ae18cf7a3ca846 593 Pfam PF16188 C-terminal region of peptidase_M24 531 590 8.7E-21 T 11-10-2018 IPR032416 Peptidase M24, C-terminal domain DB34_09195 230ff157dae2fef892ae18cf7a3ca846 593 Pfam PF00557 Metallopeptidase family M24 308 520 1.0E-42 T 11-10-2018 IPR000994 Peptidase M24 DB34_09195 230ff157dae2fef892ae18cf7a3ca846 593 Pfam PF16189 Creatinase/Prolidase N-terminal domain 146 304 8.8E-39 T 11-10-2018 DB34_09195 230ff157dae2fef892ae18cf7a3ca846 593 Pfam PF01321 Creatinase/Prolidase N-terminal domain 8 139 4.5E-16 T 11-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 DB34_09195 230ff157dae2fef892ae18cf7a3ca846 593 SUPERFAMILY SSF55920 301 556 2.75E-54 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like DB34_09195 230ff157dae2fef892ae18cf7a3ca846 593 SUPERFAMILY SSF53092 7 136 1.5E-10 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal DB34_09195 230ff157dae2fef892ae18cf7a3ca846 593 Gene3D G3DSA:3.90.230.10 298 593 2.1E-93 T 11-10-2018 DB34_00420 94a8829ef34dcc6a0c586c0623958269 320 Pfam PF08478 POTRA domain, FtsQ-type 68 135 3.8E-14 T 11-10-2018 IPR013685 POTRA domain, FtsQ-type DB34_00420 94a8829ef34dcc6a0c586c0623958269 320 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 24 275 17.839 T 11-10-2018 IPR026579 Cell division protein FtsQ GO:0090529 DB34_00420 94a8829ef34dcc6a0c586c0623958269 320 Pfam PF03799 Cell division protein FtsQ 139 257 3.2E-17 T 11-10-2018 IPR005548 Cell division protein FtsQ/DivIB DB34_00420 94a8829ef34dcc6a0c586c0623958269 320 Gene3D G3DSA:3.10.20.310 64 135 2.0E-5 T 11-10-2018 DB34_01660 07ae88059a90cb89f95fcb146d23cd80 122 SUPERFAMILY SSF47413 13 79 2.25E-16 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DB34_01660 07ae88059a90cb89f95fcb146d23cd80 122 Gene3D G3DSA:1.10.260.40 13 81 7.6E-17 T 11-10-2018 DB34_01660 07ae88059a90cb89f95fcb146d23cd80 122 Pfam PF13560 Helix-turn-helix domain 13 70 8.5E-13 T 11-10-2018 DB34_01660 07ae88059a90cb89f95fcb146d23cd80 122 SMART SM00530 17 72 3.0E-13 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DB34_03770 7514836edb4451bc450e4350ef3d931f 677 Gene3D G3DSA:1.10.10.1140 555 677 4.4E-51 T 11-10-2018 DB34_03770 7514836edb4451bc450e4350ef3d931f 677 SUPERFAMILY SSF56317 10 297 3.14E-48 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily DB34_03770 7514836edb4451bc450e4350ef3d931f 677 Pfam PF02540 NAD synthase 346 517 1.4E-24 T 11-10-2018 IPR022310 NAD/GMP synthase DB34_03770 7514836edb4451bc450e4350ef3d931f 677 Hamap MF_02090 Glutamine-dependent NAD(+) synthetase [nadE]. 11 665 27.616 T 11-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 DB34_03770 7514836edb4451bc450e4350ef3d931f 677 SUPERFAMILY SSF52402 323 643 1.12E-62 T 11-10-2018 DB34_03770 7514836edb4451bc450e4350ef3d931f 677 Gene3D G3DSA:3.60.110.10 1 320 2.9E-87 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily DB34_03770 7514836edb4451bc450e4350ef3d931f 677 Pfam PF00795 Carbon-nitrogen hydrolase 12 281 6.3E-18 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 DB34_03770 7514836edb4451bc450e4350ef3d931f 677 TIGRFAM TIGR00552 nadE: NAD+ synthetase 349 517 2.3E-20 T 11-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 DB34_03770 7514836edb4451bc450e4350ef3d931f 677 Gene3D G3DSA:3.40.50.620 321 541 2.4E-64 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DB34_03770 7514836edb4451bc450e4350ef3d931f 677 PIRSF PIRSF006630 8 667 4.3E-158 T 11-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 DB34_02755 2c163ee790c5279778d7016f0aba4c03 162 Pfam PF00380 Ribosomal protein S9/S16 42 162 1.9E-47 T 11-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 DB34_02755 2c163ee790c5279778d7016f0aba4c03 162 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 33 162 32.697 T 11-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid DB34_02755 2c163ee790c5279778d7016f0aba4c03 162 Gene3D G3DSA:3.30.230.10 34 162 7.1E-52 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DB34_02755 2c163ee790c5279778d7016f0aba4c03 162 ProSitePatterns PS00360 Ribosomal protein S9 signature. 101 119 - T 11-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 DB34_02755 2c163ee790c5279778d7016f0aba4c03 162 SUPERFAMILY SSF54211 37 162 1.4E-48 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DB34_07415 a8d454526f3ce8d8d7d61fe26d22bebb 136 SUPERFAMILY SSF54637 2 134 1.21E-45 T 11-10-2018 IPR029069 HotDog domain superfamily DB34_07415 a8d454526f3ce8d8d7d61fe26d22bebb 136 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 1 136 30.418 T 11-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DB34_07415 a8d454526f3ce8d8d7d61fe26d22bebb 136 Pfam PF07977 FabA-like domain 4 128 1.0E-35 T 11-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DB34_07415 a8d454526f3ce8d8d7d61fe26d22bebb 136 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 1 134 4.7E-54 T 11-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DB34_07415 a8d454526f3ce8d8d7d61fe26d22bebb 136 Gene3D G3DSA:3.10.129.10 1 136 2.1E-57 T 11-10-2018 DB34_11120 152541049040ef4ae4e6820b5700d260 419 Pfam PF00994 Probable molybdopterin binding domain 216 331 3.5E-22 T 11-10-2018 IPR001453 MoaB/Mog domain DB34_11120 152541049040ef4ae4e6820b5700d260 419 Gene3D G3DSA:3.40.980.10 193 343 3.5E-93 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily DB34_11120 152541049040ef4ae4e6820b5700d260 419 SUPERFAMILY SSF53218 188 336 5.89E-29 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily DB34_11120 152541049040ef4ae4e6820b5700d260 419 Gene3D G3DSA:2.170.190.11 66 159 3.5E-93 T 11-10-2018 DB34_11120 152541049040ef4ae4e6820b5700d260 419 Pfam PF03453 MoeA N-terminal region (domain I and II) 23 185 3.2E-36 T 11-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DB34_11120 152541049040ef4ae4e6820b5700d260 419 SMART SM00852 198 332 1.3E-19 T 11-10-2018 IPR001453 MoaB/Mog domain DB34_11120 152541049040ef4ae4e6820b5700d260 419 Gene3D G3DSA:3.90.105.10 43 192 3.5E-93 T 11-10-2018 DB34_11120 152541049040ef4ae4e6820b5700d260 419 Gene3D G3DSA:2.40.340.10 344 410 3.5E-93 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DB34_11120 152541049040ef4ae4e6820b5700d260 419 SUPERFAMILY SSF63882 18 194 4.71E-44 T 11-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DB34_03020 97083ddc015789c4ceafdefbebec3c00 173 Gene3D G3DSA:2.60.40.2480 22 173 1.5E-59 T 11-10-2018 IPR038482 Periplasmic metal-binding protein tp34-type superfamily DB34_03020 97083ddc015789c4ceafdefbebec3c00 173 Pfam PF10634 Fe2+ transport protein 24 170 8.3E-57 T 11-10-2018 IPR018470 Periplasmic metal-binding protein Tp34-type DB34_03020 97083ddc015789c4ceafdefbebec3c00 173 PIRSF PIRSF017018 1 173 3.7E-67 T 11-10-2018 IPR018470 Periplasmic metal-binding protein Tp34-type DB34_12175 a6c614685decf61a0ca7e1c99f919c44 588 Gene3D G3DSA:3.40.50.12780 18 471 6.7E-129 T 11-10-2018 DB34_12175 a6c614685decf61a0ca7e1c99f919c44 588 SUPERFAMILY SSF56801 59 579 2.35E-91 T 11-10-2018 DB34_12175 a6c614685decf61a0ca7e1c99f919c44 588 Gene3D G3DSA:3.30.300.30 472 582 1.5E-26 T 11-10-2018 DB34_12175 a6c614685decf61a0ca7e1c99f919c44 588 Pfam PF00501 AMP-binding enzyme 62 477 1.2E-66 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 DB34_08645 247c557a857973bb45f9c4cb6728df5b 111 SUPERFAMILY SSF54189 18 108 5.76E-33 T 11-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_08645 247c557a857973bb45f9c4cb6728df5b 111 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 20 109 22.266 T 11-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 DB34_08645 247c557a857973bb45f9c4cb6728df5b 111 Gene3D G3DSA:3.30.70.330 18 109 6.4E-33 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily DB34_08645 247c557a857973bb45f9c4cb6728df5b 111 Pfam PF00276 Ribosomal protein L23 21 106 5.7E-32 T 11-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 DB34_02145 28b2633e650e898ec2ac28bbab4c12ad 232 SUPERFAMILY SSF51419 12 226 3.4E-71 T 11-10-2018 IPR029066 PLP-binding barrel DB34_02145 28b2633e650e898ec2ac28bbab4c12ad 232 Gene3D G3DSA:3.20.20.10 9 230 5.6E-79 T 11-10-2018 IPR029066 PLP-binding barrel DB34_02145 28b2633e650e898ec2ac28bbab4c12ad 232 PIRSF PIRSF004848 7 232 2.4E-62 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 DB34_02145 28b2633e650e898ec2ac28bbab4c12ad 232 Pfam PF01168 Alanine racemase, N-terminal domain 16 229 1.8E-27 T 11-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DB34_02145 28b2633e650e898ec2ac28bbab4c12ad 232 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 14 227 25.493 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 DB34_02145 28b2633e650e898ec2ac28bbab4c12ad 232 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 15 228 1.3E-48 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 DB34_09150 550a2b8f2ec3f9071737cae3f9a67dda 335 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 29 331 6.1E-113 T 11-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 DB34_09150 550a2b8f2ec3f9071737cae3f9a67dda 335 Gene3D G3DSA:3.40.190.10 29 325 1.7E-115 T 11-10-2018 DB34_09150 550a2b8f2ec3f9071737cae3f9a67dda 335 Gene3D G3DSA:3.40.190.10 103 279 1.7E-115 T 11-10-2018 DB34_09150 550a2b8f2ec3f9071737cae3f9a67dda 335 PIRSF PIRSF002756 4 335 2.8E-107 T 11-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 DB34_09150 550a2b8f2ec3f9071737cae3f9a67dda 335 SUPERFAMILY SSF53850 28 334 3.7E-91 T 11-10-2018 DB34_09150 550a2b8f2ec3f9071737cae3f9a67dda 335 Pfam PF12849 PBP superfamily domain 24 305 1.1E-56 T 11-10-2018 IPR024370 PBP domain DB34_00740 d97154c8dace0023d6375b33fb978e5e 293 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 165 280 2.1E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB34_00740 d97154c8dace0023d6375b33fb978e5e 293 SUPERFAMILY SSF158472 4 51 5.23E-5 T 11-10-2018 DB34_00740 d97154c8dace0023d6375b33fb978e5e 293 SUPERFAMILY SSF55874 110 284 1.02E-35 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB34_00740 d97154c8dace0023d6375b33fb978e5e 293 SMART SM00387 165 282 9.2E-30 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB34_00740 d97154c8dace0023d6375b33fb978e5e 293 Gene3D G3DSA:1.10.287.130 6 119 2.6E-13 T 11-10-2018 DB34_00740 d97154c8dace0023d6375b33fb978e5e 293 Gene3D G3DSA:3.30.565.10 120 286 2.6E-34 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB34_00740 d97154c8dace0023d6375b33fb978e5e 293 SUPERFAMILY SSF47384 38 120 7.46E-8 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DB34_00740 d97154c8dace0023d6375b33fb978e5e 293 PRINTS PR00344 Bacterial sensor protein C-terminal signature 243 261 2.1E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB34_00740 d97154c8dace0023d6375b33fb978e5e 293 PRINTS PR00344 Bacterial sensor protein C-terminal signature 210 224 2.1E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB34_07560 d781efb59fbf3fd374479a32de7ceec0 217 Hamap MF_00328 Guanylate kinase [gmk]. 15 199 35.453 T 11-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 DB34_07560 d781efb59fbf3fd374479a32de7ceec0 217 Gene3D G3DSA:3.30.63.10 48 107 1.4E-64 T 11-10-2018 DB34_07560 d781efb59fbf3fd374479a32de7ceec0 217 SUPERFAMILY SSF52540 15 201 5.06E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_07560 d781efb59fbf3fd374479a32de7ceec0 217 Pfam PF00625 Guanylate kinase 20 195 1.8E-43 T 11-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit DB34_07560 d781efb59fbf3fd374479a32de7ceec0 217 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 19 195 1.4E-68 T 11-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 DB34_07560 d781efb59fbf3fd374479a32de7ceec0 217 SMART SM00072 16 199 5.4E-59 T 11-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit DB34_07560 d781efb59fbf3fd374479a32de7ceec0 217 ProSitePatterns PS00856 Guanylate kinase-like signature. 51 68 - T 11-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 DB34_07560 d781efb59fbf3fd374479a32de7ceec0 217 Gene3D G3DSA:3.40.50.300 21 194 1.4E-64 T 11-10-2018 DB34_03040 afc7d1d0567c0fbeaecf0a59755ba8f4 315 Gene3D G3DSA:3.40.190.10 170 274 3.9E-33 T 11-10-2018 DB34_03040 afc7d1d0567c0fbeaecf0a59755ba8f4 315 Gene3D G3DSA:3.40.190.10 101 300 3.9E-33 T 11-10-2018 DB34_03040 afc7d1d0567c0fbeaecf0a59755ba8f4 315 Pfam PF03466 LysR substrate binding domain 93 284 1.3E-18 T 11-10-2018 IPR005119 LysR, substrate-binding DB34_03040 afc7d1d0567c0fbeaecf0a59755ba8f4 315 Gene3D G3DSA:1.10.10.10 9 92 2.8E-15 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB34_03040 afc7d1d0567c0fbeaecf0a59755ba8f4 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 64 2.2E-12 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB34_03040 afc7d1d0567c0fbeaecf0a59755ba8f4 315 SUPERFAMILY SSF53850 92 304 1.43E-18 T 11-10-2018 DB34_03040 afc7d1d0567c0fbeaecf0a59755ba8f4 315 SUPERFAMILY SSF46785 9 112 1.9E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB34_06095 a365dbdd570a2d92db395493a2d4fca0 473 Gene3D G3DSA:1.10.579.10 300 472 4.1E-76 T 11-10-2018 DB34_06095 a365dbdd570a2d92db395493a2d4fca0 473 Pfam PF03441 FAD binding domain of DNA photolyase 280 469 1.8E-80 T 11-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 DB34_06095 a365dbdd570a2d92db395493a2d4fca0 473 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 329 341 - T 11-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal DB34_06095 a365dbdd570a2d92db395493a2d4fca0 473 SUPERFAMILY SSF52425 8 175 7.06E-42 T 11-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 DB34_06095 a365dbdd570a2d92db395493a2d4fca0 473 SUPERFAMILY SSF48173 204 470 1.7E-104 T 11-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 DB34_06095 a365dbdd570a2d92db395493a2d4fca0 473 PRINTS PR00147 DNA photolyase signature 388 402 5.9E-23 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 DB34_06095 a365dbdd570a2d92db395493a2d4fca0 473 PRINTS PR00147 DNA photolyase signature 349 367 5.9E-23 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 DB34_06095 a365dbdd570a2d92db395493a2d4fca0 473 PRINTS PR00147 DNA photolyase signature 329 345 5.9E-23 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 DB34_06095 a365dbdd570a2d92db395493a2d4fca0 473 PRINTS PR00147 DNA photolyase signature 144 160 5.9E-23 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 DB34_06095 a365dbdd570a2d92db395493a2d4fca0 473 Gene3D G3DSA:1.25.40.80 133 292 6.3E-74 T 11-10-2018 DB34_06095 a365dbdd570a2d92db395493a2d4fca0 473 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 349 368 - T 11-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal DB34_06095 a365dbdd570a2d92db395493a2d4fca0 473 Pfam PF00875 DNA photolyase 10 171 1.3E-40 T 11-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 DB34_06095 a365dbdd570a2d92db395493a2d4fca0 473 Gene3D G3DSA:3.40.50.620 11 209 6.3E-74 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DB34_00550 669759c41e72f6a8f81f32f64532afc1 296 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 74 281 1.1E-59 T 11-10-2018 DB34_00550 669759c41e72f6a8f81f32f64532afc1 296 Pfam PF12710 haloacid dehalogenase-like hydrolase 84 252 3.3E-16 T 11-10-2018 DB34_00550 669759c41e72f6a8f81f32f64532afc1 296 Gene3D G3DSA:3.40.50.1000 4 285 6.2E-65 T 11-10-2018 IPR023214 HAD superfamily DB34_00550 669759c41e72f6a8f81f32f64532afc1 296 SUPERFAMILY SSF56784 77 279 3.36E-41 T 11-10-2018 IPR036412 HAD-like superfamily DB34_00550 669759c41e72f6a8f81f32f64532afc1 296 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 82 253 1.2E-29 T 11-10-2018 DB34_07365 b529acef5fc8e72541f75712eb3ef8ac 300 TIGRFAM TIGR00436 era: GTP-binding protein Era 9 279 9.2E-74 T 11-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_07365 b529acef5fc8e72541f75712eb3ef8ac 300 SUPERFAMILY SSF52540 12 206 6.29E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_07365 b529acef5fc8e72541f75712eb3ef8ac 300 Hamap MF_00367 GTPase Era [era]. 6 296 31.905 T 11-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_07365 b529acef5fc8e72541f75712eb3ef8ac 300 Pfam PF01926 50S ribosome-binding GTPase 11 125 2.1E-23 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 DB34_07365 b529acef5fc8e72541f75712eb3ef8ac 300 Gene3D G3DSA:3.40.50.300 3 185 1.3E-46 T 11-10-2018 DB34_07365 b529acef5fc8e72541f75712eb3ef8ac 300 Gene3D G3DSA:3.30.300.20 186 299 2.8E-34 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta DB34_07365 b529acef5fc8e72541f75712eb3ef8ac 300 Pfam PF07650 KH domain 208 280 3.0E-14 T 11-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_07365 b529acef5fc8e72541f75712eb3ef8ac 300 SUPERFAMILY SSF54814 181 297 2.03E-35 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 DB34_07365 b529acef5fc8e72541f75712eb3ef8ac 300 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 11 167 7.2E-26 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DB34_04440 ef3bf5afd934f19f67850f5dd6adecab 193 SMART SM00987 29 184 3.0E-22 T 11-10-2018 DB34_04440 ef3bf5afd934f19f67850f5dd6adecab 193 Pfam PF03167 Uracil DNA glycosylase superfamily 32 183 2.4E-22 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DB34_04440 ef3bf5afd934f19f67850f5dd6adecab 193 SMART SM00986 29 184 3.0E-22 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DB34_04440 ef3bf5afd934f19f67850f5dd6adecab 193 Gene3D G3DSA:3.40.470.10 1 193 6.4E-62 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DB34_04440 ef3bf5afd934f19f67850f5dd6adecab 193 SUPERFAMILY SSF52141 5 190 2.98E-48 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DB34_03780 6232c330fb539d77ff734d1c92d5829b 218 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 7 211 6.1E-58 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 DB34_03780 6232c330fb539d77ff734d1c92d5829b 218 PIRSF PIRSF000495 5 215 7.4E-62 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 DB34_03780 6232c330fb539d77ff734d1c92d5829b 218 Gene3D G3DSA:3.40.50.880 3 216 1.4E-64 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like DB34_03780 6232c330fb539d77ff734d1c92d5829b 218 SUPERFAMILY SSF52317 7 212 5.88E-50 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like DB34_03780 6232c330fb539d77ff734d1c92d5829b 218 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 6 212 30.377 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 DB34_03780 6232c330fb539d77ff734d1c92d5829b 218 Pfam PF00117 Glutamine amidotransferase class-I 22 210 4.7E-17 T 11-10-2018 IPR017926 Glutamine amidotransferase DB34_08750 7f614df645eab6bd123c5702e16fda15 130 Gene3D G3DSA:3.30.420.80 2 130 5.5E-52 T 11-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 DB34_08750 7f614df645eab6bd123c5702e16fda15 130 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 11 127 5.4E-57 T 11-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_08750 7f614df645eab6bd123c5702e16fda15 130 ProSitePatterns PS00054 Ribosomal protein S11 signature. 98 120 - T 11-10-2018 IPR018102 Ribosomal S11, conserved site DB34_08750 7f614df645eab6bd123c5702e16fda15 130 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 130 32.879 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 DB34_08750 7f614df645eab6bd123c5702e16fda15 130 Pfam PF00411 Ribosomal protein S11 20 129 2.3E-47 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 DB34_08750 7f614df645eab6bd123c5702e16fda15 130 PIRSF PIRSF002131 1 130 3.9E-51 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 DB34_08750 7f614df645eab6bd123c5702e16fda15 130 SUPERFAMILY SSF53137 15 130 2.55E-47 T 11-10-2018 DB34_00315 05e8cc439855a3c149f2c5ee95b53abc 89 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 84 27.224 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_00315 05e8cc439855a3c149f2c5ee95b53abc 89 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 81 7.5E-36 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_00315 05e8cc439855a3c149f2c5ee95b53abc 89 PRINTS PR00063 Ribosomal protein L27 signature 29 53 1.2E-35 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_00315 05e8cc439855a3c149f2c5ee95b53abc 89 PRINTS PR00063 Ribosomal protein L27 signature 4 28 1.2E-35 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_00315 05e8cc439855a3c149f2c5ee95b53abc 89 PRINTS PR00063 Ribosomal protein L27 signature 54 78 1.2E-35 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_00315 05e8cc439855a3c149f2c5ee95b53abc 89 Pfam PF01016 Ribosomal L27 protein 2 81 6.2E-35 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_00315 05e8cc439855a3c149f2c5ee95b53abc 89 SUPERFAMILY SSF110324 2 81 2.58E-31 T 11-10-2018 DB34_00315 05e8cc439855a3c149f2c5ee95b53abc 89 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 84 3.0E-8 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_00315 05e8cc439855a3c149f2c5ee95b53abc 89 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 11-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_00315 05e8cc439855a3c149f2c5ee95b53abc 89 Gene3D G3DSA:2.40.50.100 21 89 1.3E-28 T 11-10-2018 DB34_09900 f318ac642ee831340d07b4093a7779f3 168 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 20 143 3.0E-51 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 DB34_09900 f318ac642ee831340d07b4093a7779f3 168 ProSitePatterns PS01317 SsrA-binding protein. 37 49 - T 11-10-2018 IPR020081 SsrA-binding protein, conserved site DB34_09900 f318ac642ee831340d07b4093a7779f3 168 SUPERFAMILY SSF74982 16 143 3.66E-42 T 11-10-2018 IPR023620 Small protein B DB34_09900 f318ac642ee831340d07b4093a7779f3 168 Gene3D G3DSA:2.40.280.10 12 139 1.2E-39 T 11-10-2018 IPR023620 Small protein B DB34_09900 f318ac642ee831340d07b4093a7779f3 168 Pfam PF01668 SmpB protein 19 161 2.7E-50 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 DB34_09900 f318ac642ee831340d07b4093a7779f3 168 Hamap MF_00023 SsrA-binding protein [smpB]. 1 166 60.959 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 DB34_09900 f318ac642ee831340d07b4093a7779f3 168 TIGRFAM TIGR00086 smpB: SsrA-binding protein 19 160 2.6E-48 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 DB34_06305 5f827c3745630d249b81e43b938919c8 185 Gene3D G3DSA:1.10.530.40 2 152 1.2E-32 T 11-10-2018 DB34_06305 5f827c3745630d249b81e43b938919c8 185 Pfam PF00959 Phage lysozyme 29 126 9.7E-8 T 11-10-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 DB34_06305 5f827c3745630d249b81e43b938919c8 185 SUPERFAMILY SSF53955 8 150 2.46E-31 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily DB34_12225 2994595d7ee09737d6655c4c9b45af2a 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 3.2E-5 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DB34_12225 2994595d7ee09737d6655c4c9b45af2a 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 112 125 3.2E-5 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DB34_12225 2994595d7ee09737d6655c4c9b45af2a 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 143 159 3.2E-5 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DB34_12225 2994595d7ee09737d6655c4c9b45af2a 232 SUPERFAMILY SSF56784 3 226 2.89E-45 T 11-10-2018 IPR036412 HAD-like superfamily DB34_12225 2994595d7ee09737d6655c4c9b45af2a 232 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 8 226 6.9E-51 T 11-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 DB34_12225 2994595d7ee09737d6655c4c9b45af2a 232 Gene3D G3DSA:1.10.150.240 19 98 7.2E-49 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DB34_12225 2994595d7ee09737d6655c4c9b45af2a 232 Gene3D G3DSA:3.40.50.1000 7 208 7.2E-49 T 11-10-2018 IPR023214 HAD superfamily DB34_12225 2994595d7ee09737d6655c4c9b45af2a 232 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 198 2.3E-28 T 11-10-2018 DB34_07420 a9540b9995944b6d23ca3a72b41d9fca 285 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 113 147 1.9E-9 T 11-10-2018 IPR001451 Hexapeptide repeat DB34_07420 a9540b9995944b6d23ca3a72b41d9fca 285 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 12 43 1.9E-5 T 11-10-2018 IPR001451 Hexapeptide repeat DB34_07420 a9540b9995944b6d23ca3a72b41d9fca 285 Gene3D G3DSA:2.160.10.10 4 200 6.6E-47 T 11-10-2018 DB34_07420 a9540b9995944b6d23ca3a72b41d9fca 285 PIRSF PIRSF000456 9 279 8.6E-96 T 11-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 DB34_07420 a9540b9995944b6d23ca3a72b41d9fca 285 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 12 269 7.7E-92 T 11-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 DB34_07420 a9540b9995944b6d23ca3a72b41d9fca 285 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 9 271 40.517 T 11-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 DB34_07420 a9540b9995944b6d23ca3a72b41d9fca 285 SUPERFAMILY SSF51161 9 266 9.24E-66 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily DB34_07420 a9540b9995944b6d23ca3a72b41d9fca 285 Gene3D G3DSA:1.20.1180.10 203 282 5.1E-10 T 11-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 DB34_07420 a9540b9995944b6d23ca3a72b41d9fca 285 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 184 269 5.0E-18 T 11-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 DB34_10145 7558e3d10c9677e2f6c9ee7766f0e799 279 SUPERFAMILY SSF46946 132 221 6.93E-30 T 11-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 DB34_10145 7558e3d10c9677e2f6c9ee7766f0e799 279 SUPERFAMILY SSF81624 2 141 1.57E-35 T 11-10-2018 IPR035937 MutM-like, N-terminal DB34_10145 7558e3d10c9677e2f6c9ee7766f0e799 279 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 3.7E-32 T 11-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 DB34_10145 7558e3d10c9677e2f6c9ee7766f0e799 279 Gene3D G3DSA:1.10.8.50 134 278 3.0E-46 T 11-10-2018 DB34_10145 7558e3d10c9677e2f6c9ee7766f0e799 279 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 132 221 3.0E-25 T 11-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 DB34_10145 7558e3d10c9677e2f6c9ee7766f0e799 279 SMART SM01232 132 224 3.9E-49 T 11-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 DB34_10145 7558e3d10c9677e2f6c9ee7766f0e799 279 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 277 40.238 T 11-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 DB34_10145 7558e3d10c9677e2f6c9ee7766f0e799 279 SUPERFAMILY SSF57716 220 277 5.99E-12 T 11-10-2018 DB34_10145 7558e3d10c9677e2f6c9ee7766f0e799 279 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 276 2.7E-85 T 11-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 DB34_10145 7558e3d10c9677e2f6c9ee7766f0e799 279 Gene3D G3DSA:3.20.190.10 2 130 1.6E-34 T 11-10-2018 IPR035937 MutM-like, N-terminal DB34_10145 7558e3d10c9677e2f6c9ee7766f0e799 279 SMART SM00898 2 116 5.1E-40 T 11-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 DB34_03725 5a04eed8068a1b379e6da877c0ceb54e 113 Pfam PF13586 Transposase DDE domain 29 112 8.7E-22 T 11-10-2018 IPR025668 Transposase DDE domain DB34_01765 5a04eed8068a1b379e6da877c0ceb54e 113 Pfam PF13586 Transposase DDE domain 29 112 8.7E-22 T 11-10-2018 IPR025668 Transposase DDE domain DB34_10525 5a04eed8068a1b379e6da877c0ceb54e 113 Pfam PF13586 Transposase DDE domain 29 112 8.7E-22 T 11-10-2018 IPR025668 Transposase DDE domain DB34_10420 5a04eed8068a1b379e6da877c0ceb54e 113 Pfam PF13586 Transposase DDE domain 29 112 8.7E-22 T 11-10-2018 IPR025668 Transposase DDE domain DB34_03490 5a04eed8068a1b379e6da877c0ceb54e 113 Pfam PF13586 Transposase DDE domain 29 112 8.7E-22 T 11-10-2018 IPR025668 Transposase DDE domain DB34_08530 5a04eed8068a1b379e6da877c0ceb54e 113 Pfam PF13586 Transposase DDE domain 29 112 8.7E-22 T 11-10-2018 IPR025668 Transposase DDE domain DB34_11105 5a04eed8068a1b379e6da877c0ceb54e 113 Pfam PF13586 Transposase DDE domain 29 112 8.7E-22 T 11-10-2018 IPR025668 Transposase DDE domain DB34_11010 5a04eed8068a1b379e6da877c0ceb54e 113 Pfam PF13586 Transposase DDE domain 29 112 8.7E-22 T 11-10-2018 IPR025668 Transposase DDE domain DB34_13555 5a04eed8068a1b379e6da877c0ceb54e 113 Pfam PF13586 Transposase DDE domain 29 112 8.7E-22 T 11-10-2018 IPR025668 Transposase DDE domain DB34_13625 5a04eed8068a1b379e6da877c0ceb54e 113 Pfam PF13586 Transposase DDE domain 29 112 8.7E-22 T 11-10-2018 IPR025668 Transposase DDE domain DB34_06270 5a04eed8068a1b379e6da877c0ceb54e 113 Pfam PF13586 Transposase DDE domain 29 112 8.7E-22 T 11-10-2018 IPR025668 Transposase DDE domain DB34_08540 5a04eed8068a1b379e6da877c0ceb54e 113 Pfam PF13586 Transposase DDE domain 29 112 8.7E-22 T 11-10-2018 IPR025668 Transposase DDE domain DB34_08180 5a04eed8068a1b379e6da877c0ceb54e 113 Pfam PF13586 Transposase DDE domain 29 112 8.7E-22 T 11-10-2018 IPR025668 Transposase DDE domain DB34_11430 5a04eed8068a1b379e6da877c0ceb54e 113 Pfam PF13586 Transposase DDE domain 29 112 8.7E-22 T 11-10-2018 IPR025668 Transposase DDE domain DB34_10010 d2252054517adf129bda20d3a91eb796 449 SUPERFAMILY SSF48557 3 441 5.03E-124 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 DB34_10010 d2252054517adf129bda20d3a91eb796 449 Pfam PF10397 Adenylosuccinate lyase C-terminus 358 440 5.0E-22 T 11-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DB34_10010 d2252054517adf129bda20d3a91eb796 449 Gene3D G3DSA:1.20.200.10 101 355 1.5E-86 T 11-10-2018 DB34_10010 d2252054517adf129bda20d3a91eb796 449 SMART SM00998 357 442 1.0E-30 T 11-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DB34_10010 d2252054517adf129bda20d3a91eb796 449 Gene3D G3DSA:1.10.275.10 1 100 4.9E-34 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal DB34_10010 d2252054517adf129bda20d3a91eb796 449 PRINTS PR00149 Fumarate lyase superfamily signature 269 285 4.7E-23 T 11-10-2018 IPR000362 Fumarate lyase family DB34_10010 d2252054517adf129bda20d3a91eb796 449 PRINTS PR00149 Fumarate lyase superfamily signature 96 114 4.7E-23 T 11-10-2018 IPR000362 Fumarate lyase family DB34_10010 d2252054517adf129bda20d3a91eb796 449 PRINTS PR00149 Fumarate lyase superfamily signature 224 251 4.7E-23 T 11-10-2018 IPR000362 Fumarate lyase family DB34_10010 d2252054517adf129bda20d3a91eb796 449 PRINTS PR00149 Fumarate lyase superfamily signature 141 159 4.7E-23 T 11-10-2018 IPR000362 Fumarate lyase family DB34_10010 d2252054517adf129bda20d3a91eb796 449 Gene3D G3DSA:1.10.40.30 358 444 3.4E-25 T 11-10-2018 DB34_10010 d2252054517adf129bda20d3a91eb796 449 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 2 441 3.7E-148 T 11-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DB34_10010 d2252054517adf129bda20d3a91eb796 449 Pfam PF00206 Lyase 7 292 4.2E-53 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal DB34_10010 d2252054517adf129bda20d3a91eb796 449 ProSitePatterns PS00163 Fumarate lyases signature. 269 278 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 DB34_10010 d2252054517adf129bda20d3a91eb796 449 PRINTS PR00145 Argininosuccinate lyase family signature 269 285 5.2E-5 T 11-10-2018 DB34_10010 d2252054517adf129bda20d3a91eb796 449 PRINTS PR00145 Argininosuccinate lyase family signature 136 156 5.2E-5 T 11-10-2018 DB34_10010 d2252054517adf129bda20d3a91eb796 449 PRINTS PR00145 Argininosuccinate lyase family signature 224 248 5.2E-5 T 11-10-2018 DB34_00400 829445f404f8f2c931179f04db5d7d76 382 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 189 352 3.3E-33 T 11-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 DB34_00400 829445f404f8f2c931179f04db5d7d76 382 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 6 146 8.3E-25 T 11-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DB34_00400 829445f404f8f2c931179f04db5d7d76 382 Gene3D G3DSA:3.40.50.2000 168 347 2.1E-94 T 11-10-2018 DB34_00400 829445f404f8f2c931179f04db5d7d76 382 SUPERFAMILY SSF53756 5 362 5.89E-95 T 11-10-2018 DB34_00400 829445f404f8f2c931179f04db5d7d76 382 Gene3D G3DSA:3.40.50.2000 7 352 2.1E-94 T 11-10-2018 DB34_00400 829445f404f8f2c931179f04db5d7d76 382 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 6 363 31.874 T 11-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DB34_00400 829445f404f8f2c931179f04db5d7d76 382 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 4 358 1.0E-85 T 11-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DB34_12325 80a63c7fc87aa4026d5d1a0e2d6209a2 213 Gene3D G3DSA:1.10.10.1590 14 93 1.1E-23 T 11-10-2018 DB34_12325 80a63c7fc87aa4026d5d1a0e2d6209a2 213 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 26 176 2.5E-54 T 11-10-2018 DB34_12325 80a63c7fc87aa4026d5d1a0e2d6209a2 213 PIRSF PIRSF000216 2 213 5.8E-65 T 11-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_12325 80a63c7fc87aa4026d5d1a0e2d6209a2 213 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 134 152 - T 11-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_12325 80a63c7fc87aa4026d5d1a0e2d6209a2 213 Gene3D G3DSA:3.40.30.10 94 197 1.9E-28 T 11-10-2018 DB34_12325 80a63c7fc87aa4026d5d1a0e2d6209a2 213 SUPERFAMILY SSF52833 16 194 3.91E-52 T 11-10-2018 IPR036249 Thioredoxin-like superfamily DB34_12325 80a63c7fc87aa4026d5d1a0e2d6209a2 213 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 24 176 1.8E-50 T 11-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_01370 bab51d825ac68eb51df81465657c3c82 441 Pfam PF13440 Polysaccharide biosynthesis protein 228 346 3.5E-6 T 11-10-2018 DB34_01370 bab51d825ac68eb51df81465657c3c82 441 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 352 423 7.1E-7 T 11-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain DB34_06715 c0603c45b1ccfd704233c1875c70b03b 684 SUPERFAMILY SSF51294 337 472 3.92E-10 T 11-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 DB34_06715 c0603c45b1ccfd704233c1875c70b03b 684 Pfam PF13403 Hint domain 336 475 1.8E-41 T 11-10-2018 IPR028992 Hedgehog/Intein (Hint) domain DB34_04725 2c484660fa21d995e70912f88b84bc27 68 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 3.2E-23 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DB34_04725 2c484660fa21d995e70912f88b84bc27 68 Gene3D G3DSA:2.40.50.140 1 65 7.3E-26 T 11-10-2018 DB34_04725 2c484660fa21d995e70912f88b84bc27 68 PRINTS PR00050 Cold shock protein signature 25 34 1.9E-13 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DB34_04725 2c484660fa21d995e70912f88b84bc27 68 PRINTS PR00050 Cold shock protein signature 40 58 1.9E-13 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DB34_04725 2c484660fa21d995e70912f88b84bc27 68 PRINTS PR00050 Cold shock protein signature 4 19 1.9E-13 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DB34_04725 2c484660fa21d995e70912f88b84bc27 68 SMART SM00357 3 68 1.3E-22 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 DB34_04725 2c484660fa21d995e70912f88b84bc27 68 PIRSF PIRSF002599 1 68 4.6E-21 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 DB34_04725 2c484660fa21d995e70912f88b84bc27 68 SUPERFAMILY SSF50249 1 67 4.76E-23 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB34_00960 75373a7876042afb310aea49e09f715e 156 Pfam PF00034 Cytochrome c 25 115 2.3E-12 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB34_00960 75373a7876042afb310aea49e09f715e 156 SUPERFAMILY SSF46626 26 132 2.16E-23 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DB34_00960 75373a7876042afb310aea49e09f715e 156 Gene3D G3DSA:1.10.760.10 25 152 1.0E-35 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DB34_12695 dd8eecd58562e7960f132202e5a4e758 467 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 3 466 4.5E-240 T 11-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 DB34_12695 dd8eecd58562e7960f132202e5a4e758 467 PRINTS PR00415 Aconitase family signature 344 355 6.9E-51 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DB34_12695 dd8eecd58562e7960f132202e5a4e758 467 PRINTS PR00415 Aconitase family signature 83 96 6.9E-51 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DB34_12695 dd8eecd58562e7960f132202e5a4e758 467 PRINTS PR00415 Aconitase family signature 120 133 6.9E-51 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DB34_12695 dd8eecd58562e7960f132202e5a4e758 467 PRINTS PR00415 Aconitase family signature 196 209 6.9E-51 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DB34_12695 dd8eecd58562e7960f132202e5a4e758 467 PRINTS PR00415 Aconitase family signature 134 149 6.9E-51 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DB34_12695 dd8eecd58562e7960f132202e5a4e758 467 PRINTS PR00415 Aconitase family signature 287 301 6.9E-51 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DB34_12695 dd8eecd58562e7960f132202e5a4e758 467 PRINTS PR00415 Aconitase family signature 400 413 6.9E-51 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DB34_12695 dd8eecd58562e7960f132202e5a4e758 467 PRINTS PR00415 Aconitase family signature 109 117 6.9E-51 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DB34_12695 dd8eecd58562e7960f132202e5a4e758 467 PRINTS PR00415 Aconitase family signature 210 223 6.9E-51 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DB34_12695 dd8eecd58562e7960f132202e5a4e758 467 ProSitePatterns PS00450 Aconitase family signature 1. 340 356 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 DB34_12695 dd8eecd58562e7960f132202e5a4e758 467 ProSitePatterns PS01244 Aconitase family signature 2. 400 413 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 DB34_12695 dd8eecd58562e7960f132202e5a4e758 467 Gene3D G3DSA:3.30.499.20 5 287 1.8E-101 T 11-10-2018 DB34_12695 dd8eecd58562e7960f132202e5a4e758 467 Gene3D G3DSA:3.30.499.10 329 467 8.8E-52 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 DB34_12695 dd8eecd58562e7960f132202e5a4e758 467 Pfam PF00330 Aconitase family (aconitate hydratase) 8 458 4.2E-162 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DB34_12695 dd8eecd58562e7960f132202e5a4e758 467 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 2 467 60.207 T 11-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 DB34_12695 dd8eecd58562e7960f132202e5a4e758 467 SUPERFAMILY SSF53732 3 466 4.97E-168 T 11-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 DB34_08365 e42aa6beeb057ab742dd4a63f5a56fbb 761 Gene3D G3DSA:3.30.870.10 370 548 3.7E-69 T 11-10-2018 DB34_08365 e42aa6beeb057ab742dd4a63f5a56fbb 761 Pfam PF13090 Polyphosphate kinase C-terminal domain 378 729 1.8E-146 T 11-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 DB34_08365 e42aa6beeb057ab742dd4a63f5a56fbb 761 PIRSF PIRSF015589 28 745 9.2E-253 T 11-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 DB34_08365 e42aa6beeb057ab742dd4a63f5a56fbb 761 Pfam PF02503 Polyphosphate kinase middle domain 164 368 2.5E-47 T 11-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 DB34_08365 e42aa6beeb057ab742dd4a63f5a56fbb 761 Gene3D G3DSA:3.30.1840.10 44 359 1.5E-89 T 11-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 DB34_08365 e42aa6beeb057ab742dd4a63f5a56fbb 761 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 49 730 5.2E-273 T 11-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 DB34_08365 e42aa6beeb057ab742dd4a63f5a56fbb 761 Gene3D G3DSA:3.30.870.10 553 732 2.0E-61 T 11-10-2018 DB34_08365 e42aa6beeb057ab742dd4a63f5a56fbb 761 SUPERFAMILY SSF56024 548 730 1.23E-64 T 11-10-2018 DB34_08365 e42aa6beeb057ab742dd4a63f5a56fbb 761 Hamap MF_00347 Polyphosphate kinase [ppk]. 47 734 26.77 T 11-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 DB34_08365 e42aa6beeb057ab742dd4a63f5a56fbb 761 SUPERFAMILY SSF143724 153 360 3.53E-47 T 11-10-2018 DB34_08365 e42aa6beeb057ab742dd4a63f5a56fbb 761 SUPERFAMILY SSF140356 47 147 2.49E-36 T 11-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 DB34_08365 e42aa6beeb057ab742dd4a63f5a56fbb 761 Pfam PF13089 Polyphosphate kinase N-terminal domain 50 154 2.1E-36 T 11-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 DB34_08365 e42aa6beeb057ab742dd4a63f5a56fbb 761 SUPERFAMILY SSF56024 364 545 3.34E-54 T 11-10-2018 DB34_10155 15133426e4f89f20f8f4a96630f7bb4d 409 Gene3D G3DSA:3.40.50.1950 3 187 1.7E-57 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 DB34_10155 15133426e4f89f20f8f4a96630f7bb4d 409 Pfam PF02441 Flavoprotein 9 180 4.7E-43 T 11-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 DB34_10155 15133426e4f89f20f8f4a96630f7bb4d 409 Gene3D G3DSA:3.40.50.10300 188 409 8.2E-74 T 11-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 DB34_10155 15133426e4f89f20f8f4a96630f7bb4d 409 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 192 378 1.6E-67 T 11-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 DB34_10155 15133426e4f89f20f8f4a96630f7bb4d 409 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 7 400 2.0E-122 T 11-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 DB34_10155 15133426e4f89f20f8f4a96630f7bb4d 409 SUPERFAMILY SSF102645 190 406 3.4E-72 T 11-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 DB34_10155 15133426e4f89f20f8f4a96630f7bb4d 409 SUPERFAMILY SSF52507 7 182 4.58E-60 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 DB34_02890 df004dd345ce2bd09df075d78b9c502b 889 Pfam PF00009 Elongation factor Tu GTP binding domain 393 549 8.7E-32 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB34_02890 df004dd345ce2bd09df075d78b9c502b 889 SUPERFAMILY SSF50447 561 645 1.77E-25 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DB34_02890 df004dd345ce2bd09df075d78b9c502b 889 ProSitePatterns PS01176 Initiation factor 2 signature. 842 864 - T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 DB34_02890 df004dd345ce2bd09df075d78b9c502b 889 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 11 889 17.121 T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 DB34_02890 df004dd345ce2bd09df075d78b9c502b 889 Gene3D G3DSA:3.40.50.300 385 560 2.3E-70 T 11-10-2018 DB34_02890 df004dd345ce2bd09df075d78b9c502b 889 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 11 54 1.2E-11 T 11-10-2018 IPR013575 Initiation factor 2 associated domain, bacterial DB34_02890 df004dd345ce2bd09df075d78b9c502b 889 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 391 544 1.3E-30 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DB34_02890 df004dd345ce2bd09df075d78b9c502b 889 SUPERFAMILY SSF52156 675 798 5.36E-33 T 11-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily DB34_02890 df004dd345ce2bd09df075d78b9c502b 889 Gene3D G3DSA:3.40.50.10050 686 792 1.1E-34 T 11-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily DB34_02890 df004dd345ce2bd09df075d78b9c502b 889 SUPERFAMILY SSF50447 793 886 6.86E-33 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DB34_02890 df004dd345ce2bd09df075d78b9c502b 889 Pfam PF11987 Translation-initiation factor 2 677 781 1.1E-34 T 11-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 DB34_02890 df004dd345ce2bd09df075d78b9c502b 889 Gene3D G3DSA:2.40.30.10 561 680 7.5E-43 T 11-10-2018 DB34_02890 df004dd345ce2bd09df075d78b9c502b 889 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 307 885 5.5E-246 T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 DB34_02890 df004dd345ce2bd09df075d78b9c502b 889 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 312 362 1.9E-16 T 11-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal DB34_02890 df004dd345ce2bd09df075d78b9c502b 889 SUPERFAMILY SSF52540 384 561 4.07E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_02890 df004dd345ce2bd09df075d78b9c502b 889 Gene3D G3DSA:2.40.30.10 793 888 3.8E-34 T 11-10-2018 DB34_09270 06d93e36b868a0726869c0f9da7b4802 519 SUPERFAMILY SSF82866 315 512 2.35E-42 T 11-10-2018 DB34_09270 06d93e36b868a0726869c0f9da7b4802 519 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 41 505 1.4E-136 T 11-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 DB34_09270 06d93e36b868a0726869c0f9da7b4802 519 Gene3D G3DSA:3.30.70.3400 130 210 3.8E-17 T 11-10-2018 DB34_09270 06d93e36b868a0726869c0f9da7b4802 519 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 268 498 2.2E-80 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial DB34_09270 06d93e36b868a0726869c0f9da7b4802 519 Gene3D G3DSA:3.30.1360.200 230 331 5.2E-36 T 11-10-2018 DB34_09270 06d93e36b868a0726869c0f9da7b4802 519 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 1 518 45.792 T 11-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 DB34_09270 06d93e36b868a0726869c0f9da7b4802 519 Pfam PF02355 Protein export membrane protein 340 509 2.4E-20 T 11-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial DB34_09270 06d93e36b868a0726869c0f9da7b4802 519 Pfam PF07549 SecD/SecF GG Motif 37 56 3.6E-4 T 11-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site DB34_09270 06d93e36b868a0726869c0f9da7b4802 519 Gene3D G3DSA:1.20.1640.10 332 516 6.8E-14 T 11-10-2018 DB34_04195 2b60b39346377045674fcf27a811c5c8 340 Gene3D G3DSA:3.40.50.720 4 332 9.9E-133 T 11-10-2018 DB34_04195 2b60b39346377045674fcf27a811c5c8 340 Gene3D G3DSA:3.30.360.10 155 322 9.9E-133 T 11-10-2018 DB34_04195 2b60b39346377045674fcf27a811c5c8 340 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 331 1.6E-120 T 11-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB34_04195 2b60b39346377045674fcf27a811c5c8 340 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 108 9.5E-29 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB34_04195 2b60b39346377045674fcf27a811c5c8 340 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 154 161 - T 11-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB34_04195 2b60b39346377045674fcf27a811c5c8 340 SUPERFAMILY SSF51735 3 172 1.45E-51 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily DB34_04195 2b60b39346377045674fcf27a811c5c8 340 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 150 168 5.4E-35 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB34_04195 2b60b39346377045674fcf27a811c5c8 340 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 275 290 5.4E-35 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB34_04195 2b60b39346377045674fcf27a811c5c8 340 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 114 127 5.4E-35 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB34_04195 2b60b39346377045674fcf27a811c5c8 340 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 233 250 5.4E-35 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB34_04195 2b60b39346377045674fcf27a811c5c8 340 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 177 193 5.4E-35 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB34_04195 2b60b39346377045674fcf27a811c5c8 340 SMART SM00846 3 156 3.6E-79 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB34_04195 2b60b39346377045674fcf27a811c5c8 340 PIRSF PIRSF000149 1 339 1.3E-120 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB34_04195 2b60b39346377045674fcf27a811c5c8 340 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 161 320 1.4E-58 T 11-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB34_04195 2b60b39346377045674fcf27a811c5c8 340 SUPERFAMILY SSF55347 156 321 6.55E-64 T 11-10-2018 DB34_04695 662fd5ec2944c33b3dc4c6a3baf3c079 462 Gene3D G3DSA:2.30.170.30 1 54 4.2E-20 T 11-10-2018 DB34_04695 662fd5ec2944c33b3dc4c6a3baf3c079 462 Pfam PF06751 Ethanolamine ammonia lyase large subunit (EutB) 12 443 1.8E-217 T 11-10-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 DB34_04695 662fd5ec2944c33b3dc4c6a3baf3c079 462 Gene3D G3DSA:1.10.220.70 56 141 8.3E-34 T 11-10-2018 DB34_04695 662fd5ec2944c33b3dc4c6a3baf3c079 462 PIRSF PIRSF018788 1 457 7.1E-230 T 11-10-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 DB34_04695 662fd5ec2944c33b3dc4c6a3baf3c079 462 Gene3D G3DSA:3.20.20.70 142 453 4.4E-141 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB34_03235 913627f0e0e6d6407a00bd2f1916902e 342 SUPERFAMILY SSF53800 17 341 1.21E-95 T 11-10-2018 DB34_03235 913627f0e0e6d6407a00bd2f1916902e 342 Hamap MF_00323 Ferrochelatase [hemH]. 17 338 36.478 T 11-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 DB34_03235 913627f0e0e6d6407a00bd2f1916902e 342 Gene3D G3DSA:3.40.50.1400 19 338 2.4E-92 T 11-10-2018 DB34_03235 913627f0e0e6d6407a00bd2f1916902e 342 Pfam PF00762 Ferrochelatase 19 337 8.7E-103 T 11-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 DB34_03235 913627f0e0e6d6407a00bd2f1916902e 342 ProSitePatterns PS00534 Ferrochelatase signature. 207 227 - T 11-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 DB34_03235 913627f0e0e6d6407a00bd2f1916902e 342 Gene3D G3DSA:3.40.50.1400 180 319 2.4E-92 T 11-10-2018 DB34_03235 913627f0e0e6d6407a00bd2f1916902e 342 TIGRFAM TIGR00109 hemH: ferrochelatase 17 335 1.4E-86 T 11-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 DB34_10230 2130198559a1215fbf16fd532904491c 174 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 15 160 16.49 T 11-10-2018 IPR011605 NusB antitermination factor GO:0006353 DB34_10230 2130198559a1215fbf16fd532904491c 174 Gene3D G3DSA:1.10.940.10 13 166 7.2E-29 T 11-10-2018 IPR035926 NusB-like superfamily DB34_10230 2130198559a1215fbf16fd532904491c 174 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 17 158 4.2E-30 T 11-10-2018 IPR011605 NusB antitermination factor GO:0006353 DB34_10230 2130198559a1215fbf16fd532904491c 174 SUPERFAMILY SSF48013 16 159 3.79E-25 T 11-10-2018 IPR035926 NusB-like superfamily DB34_10230 2130198559a1215fbf16fd532904491c 174 Pfam PF01029 NusB family 19 155 1.4E-20 T 11-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 DB34_10225 4610a68830caee5be8c164178f3e955c 329 Gene3D G3DSA:3.90.650.10 156 329 9.5E-41 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily DB34_10225 4610a68830caee5be8c164178f3e955c 329 Pfam PF02769 AIR synthase related protein, C-terminal domain 163 305 6.6E-6 T 11-10-2018 IPR010918 PurM-like, C-terminal domain DB34_10225 4610a68830caee5be8c164178f3e955c 329 PIRSF PIRSF005303 7 329 1.6E-76 T 11-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 DB34_10225 4610a68830caee5be8c164178f3e955c 329 SUPERFAMILY SSF56042 153 313 1.12E-30 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily DB34_10225 4610a68830caee5be8c164178f3e955c 329 Gene3D G3DSA:3.30.1330.10 12 154 5.2E-37 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily DB34_10225 4610a68830caee5be8c164178f3e955c 329 Pfam PF00586 AIR synthase related protein, N-terminal domain 36 148 2.8E-18 T 11-10-2018 IPR016188 PurM-like, N-terminal domain DB34_10225 4610a68830caee5be8c164178f3e955c 329 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 15 329 5.0E-82 T 11-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 DB34_10225 4610a68830caee5be8c164178f3e955c 329 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 13 329 25.038 T 11-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 DB34_10225 4610a68830caee5be8c164178f3e955c 329 SUPERFAMILY SSF55326 19 147 1.74E-29 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily DB34_01425 7e9939a1a7590b5ecf8acfc3e015c1a0 610 Pfam PF02272 DHHA1 domain 356 478 9.7E-21 T 11-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 DB34_01425 7e9939a1a7590b5ecf8acfc3e015c1a0 610 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 57 606 2.2E-151 T 11-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 DB34_01425 7e9939a1a7590b5ecf8acfc3e015c1a0 610 Gene3D G3DSA:3.10.310.30 360 485 3.3E-30 T 11-10-2018 DB34_01425 7e9939a1a7590b5ecf8acfc3e015c1a0 610 Gene3D G3DSA:3.90.1640.30 87 359 5.9E-77 T 11-10-2018 DB34_01425 7e9939a1a7590b5ecf8acfc3e015c1a0 610 SUPERFAMILY SSF64182 86 484 6.67E-107 T 11-10-2018 IPR038763 DHH phosphoesterase superfamily DB34_01425 7e9939a1a7590b5ecf8acfc3e015c1a0 610 Pfam PF01368 DHH family 114 210 6.1E-7 T 11-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 DB34_02160 cacd83d25c434c613d7398d50a7ea9d5 144 Pfam PF07370 Protein of unknown function (DUF1489) 4 144 4.0E-46 T 11-10-2018 IPR008320 Uncharacterised conserved protein UCP032025 DB34_02160 cacd83d25c434c613d7398d50a7ea9d5 144 PIRSF PIRSF032025 1 144 8.0E-42 T 11-10-2018 IPR008320 Uncharacterised conserved protein UCP032025 DB34_07275 3346f85732a303025e8293382359cf50 481 SUPERFAMILY SSF54368 17 114 2.22E-33 T 11-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DB34_07275 3346f85732a303025e8293382359cf50 481 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 18 480 2.1E-199 T 11-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DB34_07275 3346f85732a303025e8293382359cf50 481 Pfam PF00120 Glutamine synthetase, catalytic domain 116 478 2.4E-136 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DB34_07275 3346f85732a303025e8293382359cf50 481 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 398 410 - T 11-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DB34_07275 3346f85732a303025e8293382359cf50 481 Gene3D G3DSA:3.30.590.10 118 467 7.3E-139 T 11-10-2018 DB34_07275 3346f85732a303025e8293382359cf50 481 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 271 286 - T 11-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 DB34_07275 3346f85732a303025e8293382359cf50 481 Gene3D G3DSA:3.10.20.70 15 117 2.9E-35 T 11-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DB34_07275 3346f85732a303025e8293382359cf50 481 SUPERFAMILY SSF55931 116 480 1.57E-133 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 DB34_07275 3346f85732a303025e8293382359cf50 481 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 28 108 3.4E-27 T 11-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 DB34_07275 3346f85732a303025e8293382359cf50 481 SMART SM01230 115 391 1.3E-141 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DB34_07275 3346f85732a303025e8293382359cf50 481 ProSitePatterns PS00180 Glutamine synthetase signature 1. 63 81 - T 11-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 DB34_09575 2481a00ccea63eac17ad4cb075cbda99 338 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 20 31 - T 11-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DB34_09575 2481a00ccea63eac17ad4cb075cbda99 338 SMART SM00729 14 223 4.2E-8 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DB34_09575 2481a00ccea63eac17ad4cb075cbda99 338 Pfam PF13353 4Fe-4S single cluster domain 21 116 1.3E-6 T 11-10-2018 DB34_09575 2481a00ccea63eac17ad4cb075cbda99 338 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 5 338 37.693 T 11-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DB34_09575 2481a00ccea63eac17ad4cb075cbda99 338 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 5 338 2.7E-103 T 11-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DB34_09575 2481a00ccea63eac17ad4cb075cbda99 338 Gene3D G3DSA:3.20.20.70 2 338 9.1E-84 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB34_09575 2481a00ccea63eac17ad4cb075cbda99 338 SUPERFAMILY SSF102114 5 303 1.01E-73 T 11-10-2018 DB34_09575 2481a00ccea63eac17ad4cb075cbda99 338 Pfam PF06463 Molybdenum Cofactor Synthesis C 191 316 3.1E-37 T 11-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DB34_09575 2481a00ccea63eac17ad4cb075cbda99 338 Pfam PF04055 Radical SAM superfamily 18 184 1.3E-25 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DB34_08350 a0fd779e4015a78442a24996dec5519f 207 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 139 162 - T 11-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DB34_08350 a0fd779e4015a78442a24996dec5519f 207 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 8 194 2.5E-64 T 11-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 DB34_08350 a0fd779e4015a78442a24996dec5519f 207 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 7 193 30.082 T 11-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 DB34_08350 a0fd779e4015a78442a24996dec5519f 207 SUPERFAMILY SSF53328 8 196 6.02E-58 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DB34_08350 a0fd779e4015a78442a24996dec5519f 207 Gene3D G3DSA:3.40.50.170 1 203 1.6E-72 T 11-10-2018 DB34_08350 a0fd779e4015a78442a24996dec5519f 207 Pfam PF00551 Formyl transferase 8 187 3.6E-53 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DB34_04075 e2df43a02c9acc69647e3e4d1749ba30 147 Gene3D G3DSA:3.40.630.30 4 147 3.9E-31 T 11-10-2018 DB34_04075 e2df43a02c9acc69647e3e4d1749ba30 147 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 18 142 4.8E-28 T 11-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 DB34_04075 e2df43a02c9acc69647e3e4d1749ba30 147 SUPERFAMILY SSF55729 4 139 3.87E-28 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase DB34_04075 e2df43a02c9acc69647e3e4d1749ba30 147 Pfam PF00583 Acetyltransferase (GNAT) family 49 124 1.2E-16 T 11-10-2018 IPR000182 GNAT domain DB34_03025 dbf0710ffd4d766de51791763d68f457 526 Pfam PF04966 Carbohydrate-selective porin, OprB family 132 526 4.1E-90 T 11-10-2018 IPR007049 Carbohydrate-selective porin OprB GO:0008643|GO:0015288|GO:0016021 DB34_03025 dbf0710ffd4d766de51791763d68f457 526 Gene3D G3DSA:2.40.160.180 79 526 1.5E-131 T 11-10-2018 IPR038673 Carbohydrate-selective porin OprB superfamily DB34_09500 0a013ab21174986794e8fa269c342664 715 SUPERFAMILY SSF52540 195 464 1.13E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_09500 0a013ab21174986794e8fa269c342664 715 Gene3D G3DSA:3.40.50.300 225 461 6.5E-78 T 11-10-2018 DB34_09500 0a013ab21174986794e8fa269c342664 715 Pfam PF17191 RecG wedge domain 33 183 6.4E-5 T 11-10-2018 IPR033454 RecG, wedge domain DB34_09500 0a013ab21174986794e8fa269c342664 715 SUPERFAMILY SSF52540 404 610 6.96E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_09500 0a013ab21174986794e8fa269c342664 715 Pfam PF00270 DEAD/DEAH box helicase 312 443 5.1E-15 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DB34_09500 0a013ab21174986794e8fa269c342664 715 SMART SM00487 284 471 3.7E-30 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DB34_09500 0a013ab21174986794e8fa269c342664 715 Pfam PF00271 Helicase conserved C-terminal domain 494 598 2.4E-15 T 11-10-2018 IPR001650 Helicase, C-terminal DB34_09500 0a013ab21174986794e8fa269c342664 715 Gene3D G3DSA:2.40.50.140 65 158 4.8E-13 T 11-10-2018 DB34_09500 0a013ab21174986794e8fa269c342664 715 Gene3D G3DSA:3.40.50.300 470 640 1.4E-42 T 11-10-2018 DB34_09500 0a013ab21174986794e8fa269c342664 715 SMART SM00490 517 599 9.1E-18 T 11-10-2018 IPR001650 Helicase, C-terminal DB34_09500 0a013ab21174986794e8fa269c342664 715 SUPERFAMILY SSF50249 22 190 1.71E-20 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB34_00435 ef538898d951c31200bae2c90f27fd50 326 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 33 322 9.0E-92 T 11-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 DB34_00435 ef538898d951c31200bae2c90f27fd50 326 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 33 307 5.2E-99 T 11-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 DB34_00435 ef538898d951c31200bae2c90f27fd50 326 SUPERFAMILY SSF54211 165 309 1.74E-44 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DB34_00435 ef538898d951c31200bae2c90f27fd50 326 SUPERFAMILY SSF54211 32 157 2.28E-36 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DB34_00435 ef538898d951c31200bae2c90f27fd50 326 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 31 311 40.634 T 11-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 DB34_00435 ef538898d951c31200bae2c90f27fd50 326 Gene3D G3DSA:3.30.230.20 31 159 2.2E-45 T 11-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 DB34_00435 ef538898d951c31200bae2c90f27fd50 326 Gene3D G3DSA:3.30.1700.10 160 325 2.9E-55 T 11-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 DB34_09040 83dbcbfdc1168436dcc1fe1d3e3b0862 534 Gene3D G3DSA:1.25.40.10 5 251 2.8E-38 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB34_09040 83dbcbfdc1168436dcc1fe1d3e3b0862 534 SMART SM00028 181 214 2.7E-5 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB34_09040 83dbcbfdc1168436dcc1fe1d3e3b0862 534 SMART SM00028 147 180 0.21 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB34_09040 83dbcbfdc1168436dcc1fe1d3e3b0862 534 SMART SM00028 113 146 0.01 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB34_09040 83dbcbfdc1168436dcc1fe1d3e3b0862 534 Pfam PF13181 Tetratricopeptide repeat 113 145 8.9E-5 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB34_09040 83dbcbfdc1168436dcc1fe1d3e3b0862 534 SUPERFAMILY SSF48452 92 244 2.28E-30 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB34_09040 83dbcbfdc1168436dcc1fe1d3e3b0862 534 Pfam PF13424 Tetratricopeptide repeat 149 211 5.8E-10 T 11-10-2018 DB34_09040 83dbcbfdc1168436dcc1fe1d3e3b0862 534 SUPERFAMILY SSF53756 268 526 1.6E-16 T 11-10-2018 DB34_11245 a5357e3c7d8c2869cfc35c0dc7f83f1a 147 Gene3D G3DSA:1.10.10.60 1 21 1.3E-6 T 11-10-2018 DB34_11245 a5357e3c7d8c2869cfc35c0dc7f83f1a 147 Pfam PF16859 Bacterial transcriptional repressor C-terminal 46 146 2.7E-12 T 11-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal DB34_11245 a5357e3c7d8c2869cfc35c0dc7f83f1a 147 SUPERFAMILY SSF48498 46 147 1.0E-8 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DB34_11245 a5357e3c7d8c2869cfc35c0dc7f83f1a 147 Gene3D G3DSA:1.10.357.10 23 147 7.6E-17 T 11-10-2018 DB34_01010 5d016dfd7d7ccc6a5219666727c61813 326 Pfam PF02445 Quinolinate synthetase A protein 35 324 1.2E-111 T 11-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 DB34_01010 5d016dfd7d7ccc6a5219666727c61813 326 Gene3D G3DSA:3.40.50.10800 198 282 9.7E-110 T 11-10-2018 DB34_01010 5d016dfd7d7ccc6a5219666727c61813 326 Gene3D G3DSA:3.40.50.10800 115 324 9.7E-110 T 11-10-2018 DB34_01010 5d016dfd7d7ccc6a5219666727c61813 326 Gene3D G3DSA:3.40.50.10800 35 307 9.7E-110 T 11-10-2018 DB34_01010 5d016dfd7d7ccc6a5219666727c61813 326 Hamap MF_00568 Quinolinate synthase A [nadA]. 30 326 42.476 T 11-10-2018 IPR023066 Quinolinate synthase A, type 2 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 DB34_01010 5d016dfd7d7ccc6a5219666727c61813 326 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 34 326 4.3E-96 T 11-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 DB34_01010 5d016dfd7d7ccc6a5219666727c61813 326 SUPERFAMILY SSF142754 33 325 5.1E-107 T 11-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 DB34_08760 fe2cb73dc2465f8755b120e20fd5e611 141 Pfam PF01196 Ribosomal protein L17 20 116 3.8E-38 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_08760 fe2cb73dc2465f8755b120e20fd5e611 141 TIGRFAM TIGR00059 L17: ribosomal protein bL17 8 117 5.0E-47 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_08760 fe2cb73dc2465f8755b120e20fd5e611 141 SUPERFAMILY SSF64263 1 119 1.96E-51 T 11-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_08760 fe2cb73dc2465f8755b120e20fd5e611 141 Gene3D G3DSA:3.90.1030.10 1 116 4.7E-49 T 11-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_08760 fe2cb73dc2465f8755b120e20fd5e611 141 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.919 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_08760 fe2cb73dc2465f8755b120e20fd5e611 141 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_12305 85d438904498001cb6f27f94bea6ffd6 162 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 10 146 29.281 T 11-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_12305 85d438904498001cb6f27f94bea6ffd6 162 SUPERFAMILY SSF54862 36 146 7.95E-29 T 11-10-2018 DB34_12305 85d438904498001cb6f27f94bea6ffd6 162 Pfam PF12838 4Fe-4S dicluster domain 62 116 1.3E-13 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DB34_12305 85d438904498001cb6f27f94bea6ffd6 162 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 102 113 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DB34_12305 85d438904498001cb6f27f94bea6ffd6 162 Gene3D G3DSA:3.30.70.3270 36 159 6.7E-44 T 11-10-2018 DB34_12305 85d438904498001cb6f27f94bea6ffd6 162 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 19 140 6.1E-51 T 11-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_00620 9d9e8a770cd17be64e410e3604d4186b 268 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 8 19 - T 11-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 DB34_00620 9d9e8a770cd17be64e410e3604d4186b 268 Gene3D G3DSA:1.10.287.610 105 151 4.9E-87 T 11-10-2018 DB34_00620 9d9e8a770cd17be64e410e3604d4186b 268 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 4 235 40.943 T 11-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_00620 9d9e8a770cd17be64e410e3604d4186b 268 SUPERFAMILY SSF52313 8 231 4.71E-90 T 11-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily DB34_00620 9d9e8a770cd17be64e410e3604d4186b 268 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 7 225 1.9E-97 T 11-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_00620 9d9e8a770cd17be64e410e3604d4186b 268 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 159 183 - T 11-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 DB34_00620 9d9e8a770cd17be64e410e3604d4186b 268 Gene3D G3DSA:3.40.50.10490 10 220 4.9E-87 T 11-10-2018 DB34_00620 9d9e8a770cd17be64e410e3604d4186b 268 Pfam PF00318 Ribosomal protein S2 11 225 4.6E-92 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_00620 9d9e8a770cd17be64e410e3604d4186b 268 PRINTS PR00395 Ribosomal protein S2 signature 159 176 1.9E-39 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_00620 9d9e8a770cd17be64e410e3604d4186b 268 PRINTS PR00395 Ribosomal protein S2 signature 176 187 1.9E-39 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_00620 9d9e8a770cd17be64e410e3604d4186b 268 PRINTS PR00395 Ribosomal protein S2 signature 8 26 1.9E-39 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_00620 9d9e8a770cd17be64e410e3604d4186b 268 PRINTS PR00395 Ribosomal protein S2 signature 89 106 1.9E-39 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_00620 9d9e8a770cd17be64e410e3604d4186b 268 PRINTS PR00395 Ribosomal protein S2 signature 197 211 1.9E-39 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_00620 9d9e8a770cd17be64e410e3604d4186b 268 PRINTS PR00395 Ribosomal protein S2 signature 39 48 1.9E-39 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_04275 824433327f6e8020dad0ae0e9269d6ce 198 SUPERFAMILY SSF111304 4 197 1.83E-62 T 11-10-2018 IPR023627 Recombination protein RecR DB34_04275 824433327f6e8020dad0ae0e9269d6ce 198 Pfam PF02132 RecR protein 40 77 6.2E-13 T 11-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger DB34_04275 824433327f6e8020dad0ae0e9269d6ce 198 TIGRFAM TIGR00615 recR: recombination protein RecR 4 196 3.6E-58 T 11-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 DB34_04275 824433327f6e8020dad0ae0e9269d6ce 198 ProSitePatterns PS01300 RecR protein signature. 56 77 - T 11-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 DB34_04275 824433327f6e8020dad0ae0e9269d6ce 198 Gene3D G3DSA:3.40.1360.10 76 197 2.9E-34 T 11-10-2018 DB34_04275 824433327f6e8020dad0ae0e9269d6ce 198 Pfam PF13662 Toprim domain 80 171 1.0E-20 T 11-10-2018 IPR006171 TOPRIM domain DB34_04275 824433327f6e8020dad0ae0e9269d6ce 198 SMART SM00493 79 164 0.0012 T 11-10-2018 IPR006171 TOPRIM domain DB34_04275 824433327f6e8020dad0ae0e9269d6ce 198 Hamap MF_00017 Recombination protein RecR [recR]. 1 198 86.991 T 11-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 DB34_04275 824433327f6e8020dad0ae0e9269d6ce 198 Gene3D G3DSA:1.10.8.420 3 51 7.2E-12 T 11-10-2018 DB34_03655 966d05adab8b8819cce76fd02c6c6a5f 908 Gene3D G3DSA:3.40.50.300 22 404 1.1E-176 T 11-10-2018 DB34_03655 966d05adab8b8819cce76fd02c6c6a5f 908 Pfam PF01043 SecA preprotein cross-linking domain 232 347 4.3E-37 T 11-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 DB34_03655 966d05adab8b8819cce76fd02c6c6a5f 908 Gene3D G3DSA:3.40.50.300 406 614 3.3E-89 T 11-10-2018 DB34_03655 966d05adab8b8819cce76fd02c6c6a5f 908 SUPERFAMILY SSF52540 405 613 5.07E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_03655 966d05adab8b8819cce76fd02c6c6a5f 908 Gene3D G3DSA:3.90.1440.10 229 357 1.1E-176 T 11-10-2018 DB34_03655 966d05adab8b8819cce76fd02c6c6a5f 908 SUPERFAMILY SSF81767 227 357 3.79E-42 T 11-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 DB34_03655 966d05adab8b8819cce76fd02c6c6a5f 908 Pfam PF07517 SecA DEAD-like domain 8 390 4.2E-130 T 11-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 DB34_03655 966d05adab8b8819cce76fd02c6c6a5f 908 ProSitePatterns PS01312 SecA family signature. 489 504 - T 11-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 DB34_03655 966d05adab8b8819cce76fd02c6c6a5f 908 SUPERFAMILY SSF81886 615 896 2.49E-75 T 11-10-2018 IPR036266 SecA, Wing/Scaffold superfamily DB34_03655 966d05adab8b8819cce76fd02c6c6a5f 908 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 811 0.0 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DB34_03655 966d05adab8b8819cce76fd02c6c6a5f 908 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 826 20.179 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DB34_03655 966d05adab8b8819cce76fd02c6c6a5f 908 Pfam PF02810 SEC-C motif 888 906 1.1E-9 T 11-10-2018 IPR004027 SEC-C motif DB34_03655 966d05adab8b8819cce76fd02c6c6a5f 908 Gene3D G3DSA:3.10.450.50 872 908 3.4E-6 T 11-10-2018 DB34_03655 966d05adab8b8819cce76fd02c6c6a5f 908 PRINTS PR00906 SecA protein signature 101 115 4.9E-71 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DB34_03655 966d05adab8b8819cce76fd02c6c6a5f 908 PRINTS PR00906 SecA protein signature 63 87 4.9E-71 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DB34_03655 966d05adab8b8819cce76fd02c6c6a5f 908 PRINTS PR00906 SecA protein signature 402 415 4.9E-71 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DB34_03655 966d05adab8b8819cce76fd02c6c6a5f 908 PRINTS PR00906 SecA protein signature 365 382 4.9E-71 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DB34_03655 966d05adab8b8819cce76fd02c6c6a5f 908 PRINTS PR00906 SecA protein signature 117 127 4.9E-71 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DB34_03655 966d05adab8b8819cce76fd02c6c6a5f 908 PRINTS PR00906 SecA protein signature 328 350 4.9E-71 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DB34_03655 966d05adab8b8819cce76fd02c6c6a5f 908 PRINTS PR00906 SecA protein signature 170 190 4.9E-71 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DB34_03655 966d05adab8b8819cce76fd02c6c6a5f 908 Pfam PF07516 SecA Wing and Scaffold domain 612 823 1.6E-62 T 11-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 DB34_03655 966d05adab8b8819cce76fd02c6c6a5f 908 SUPERFAMILY SSF52540 7 404 5.79E-82 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_03655 966d05adab8b8819cce76fd02c6c6a5f 908 SMART SM00957 6 391 2.5E-293 T 11-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 DB34_03655 966d05adab8b8819cce76fd02c6c6a5f 908 Gene3D G3DSA:1.10.3060.10 616 826 4.9E-70 T 11-10-2018 DB34_03655 966d05adab8b8819cce76fd02c6c6a5f 908 SMART SM00958 228 347 3.6E-70 T 11-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 DB34_09120 514fdc4ec59d113cf70a548fc89958a9 442 PIRSF PIRSF000018 13 442 4.5E-168 T 11-10-2018 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0016020|GO:0016614|GO:0020037 DB34_09120 514fdc4ec59d113cf70a548fc89958a9 442 SUPERFAMILY SSF46626 332 414 1.48E-14 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DB34_09120 514fdc4ec59d113cf70a548fc89958a9 442 SUPERFAMILY SSF46626 191 297 7.22E-14 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DB34_09120 514fdc4ec59d113cf70a548fc89958a9 442 SUPERFAMILY SSF46626 26 170 2.08E-22 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DB34_09120 514fdc4ec59d113cf70a548fc89958a9 442 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 331 409 9.5E-8 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB34_09120 514fdc4ec59d113cf70a548fc89958a9 442 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 46 145 2.8E-5 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB34_09120 514fdc4ec59d113cf70a548fc89958a9 442 Gene3D G3DSA:1.10.760.10 187 297 4.4E-6 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DB34_09120 514fdc4ec59d113cf70a548fc89958a9 442 Gene3D G3DSA:1.10.760.10 5 154 2.2E-10 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DB34_09120 514fdc4ec59d113cf70a548fc89958a9 442 Gene3D G3DSA:1.10.760.10 298 415 4.7E-13 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DB34_06720 5688844bd707853793818e84b1d77c5a 283 Gene3D G3DSA:1.10.260.40 2 69 5.6E-11 T 11-10-2018 DB34_06720 5688844bd707853793818e84b1d77c5a 283 SUPERFAMILY SSF51306 188 282 6.1E-13 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily DB34_06720 5688844bd707853793818e84b1d77c5a 283 SUPERFAMILY SSF47413 3 66 1.45E-10 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DB34_06720 5688844bd707853793818e84b1d77c5a 283 Gene3D G3DSA:2.10.109.10 168 281 5.2E-8 T 11-10-2018 DB34_06720 5688844bd707853793818e84b1d77c5a 283 Pfam PF01381 Helix-turn-helix 12 65 1.8E-10 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DB34_06720 5688844bd707853793818e84b1d77c5a 283 SMART SM00530 9 65 3.5E-9 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DB34_08550 919116a7c34eec2d96f8b72c8461bbb9 430 SUPERFAMILY SSF103473 9 412 2.22E-63 T 11-10-2018 IPR036259 MFS transporter superfamily DB34_08550 919116a7c34eec2d96f8b72c8461bbb9 430 Gene3D G3DSA:1.20.1250.20 6 416 9.7E-67 T 11-10-2018 DB34_08550 919116a7c34eec2d96f8b72c8461bbb9 430 Pfam PF07690 Major Facilitator Superfamily 20 358 2.7E-30 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DB34_08550 919116a7c34eec2d96f8b72c8461bbb9 430 ProSitePatterns PS00216 Sugar transport proteins signature 1. 69 85 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 DB34_08550 919116a7c34eec2d96f8b72c8461bbb9 430 ProSitePatterns PS00217 Sugar transport proteins signature 2. 119 144 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 DB34_13135 00137f486f68b898fcbd733caf7d20ae 371 Pfam PF04865 Baseplate J-like protein 67 334 1.5E-64 T 11-10-2018 IPR006949 Baseplate protein J-like DB34_00680 4a8f72eaf62403876620b8237f292368 401 Pfam PF00155 Aminotransferase class I and II 33 393 8.6E-80 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DB34_00680 4a8f72eaf62403876620b8237f292368 401 Gene3D G3DSA:3.90.1150.10 27 393 4.2E-138 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB34_00680 4a8f72eaf62403876620b8237f292368 401 SUPERFAMILY SSF53383 5 399 2.31E-118 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB34_00680 4a8f72eaf62403876620b8237f292368 401 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 237 250 - T 11-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 DB34_00680 4a8f72eaf62403876620b8237f292368 401 Gene3D G3DSA:3.40.640.10 64 287 4.2E-138 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB34_07755 b9e14a1eed21932dad4c0a8095620add 372 Pfam PF13365 Trypsin-like peptidase domain 105 239 2.2E-30 T 11-10-2018 DB34_07755 b9e14a1eed21932dad4c0a8095620add 372 SUPERFAMILY SSF50156 276 362 3.15E-18 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 DB34_07755 b9e14a1eed21932dad4c0a8095620add 372 SUPERFAMILY SSF50494 45 269 2.59E-61 T 11-10-2018 IPR009003 Peptidase S1, PA clan DB34_07755 b9e14a1eed21932dad4c0a8095620add 372 PRINTS PR00834 HtrA/DegQ protease family signature 114 126 4.5E-49 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DB34_07755 b9e14a1eed21932dad4c0a8095620add 372 PRINTS PR00834 HtrA/DegQ protease family signature 308 320 4.5E-49 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DB34_07755 b9e14a1eed21932dad4c0a8095620add 372 PRINTS PR00834 HtrA/DegQ protease family signature 176 200 4.5E-49 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DB34_07755 b9e14a1eed21932dad4c0a8095620add 372 PRINTS PR00834 HtrA/DegQ protease family signature 210 227 4.5E-49 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DB34_07755 b9e14a1eed21932dad4c0a8095620add 372 PRINTS PR00834 HtrA/DegQ protease family signature 135 155 4.5E-49 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DB34_07755 b9e14a1eed21932dad4c0a8095620add 372 PRINTS PR00834 HtrA/DegQ protease family signature 232 249 4.5E-49 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DB34_07755 b9e14a1eed21932dad4c0a8095620add 372 Pfam PF13180 PDZ domain 278 357 2.6E-15 T 11-10-2018 IPR001478 PDZ domain GO:0005515 DB34_07755 b9e14a1eed21932dad4c0a8095620add 372 Gene3D G3DSA:2.30.42.10 273 367 4.1E-19 T 11-10-2018 DB34_07755 b9e14a1eed21932dad4c0a8095620add 372 SMART SM00228 278 350 6.2E-10 T 11-10-2018 IPR001478 PDZ domain GO:0005515 DB34_07755 b9e14a1eed21932dad4c0a8095620add 372 Gene3D G3DSA:2.40.10.120 47 271 1.6E-74 T 11-10-2018 DB34_04845 855668eaafd27c7e6f127bcf56b2ac20 240 SUPERFAMILY SSF53167 11 170 6.41E-23 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 DB34_04845 855668eaafd27c7e6f127bcf56b2ac20 240 Gene3D G3DSA:3.40.50.1580 15 172 4.3E-16 T 11-10-2018 DB34_04845 855668eaafd27c7e6f127bcf56b2ac20 240 Pfam PF01048 Phosphorylase superfamily 109 168 1.3E-7 T 11-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 DB34_02725 fcd1193b74688029a708a02a6eb86c90 270 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 263 2.1E-69 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 DB34_02725 fcd1193b74688029a708a02a6eb86c90 270 Gene3D G3DSA:3.10.310.10 5 261 6.9E-81 T 11-10-2018 DB34_02725 fcd1193b74688029a708a02a6eb86c90 270 SUPERFAMILY SSF54506 135 264 7.22E-38 T 11-10-2018 DB34_02725 fcd1193b74688029a708a02a6eb86c90 270 SUPERFAMILY SSF54506 4 130 2.36E-42 T 11-10-2018 DB34_02725 fcd1193b74688029a708a02a6eb86c90 270 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 11-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 DB34_02725 fcd1193b74688029a708a02a6eb86c90 270 Pfam PF01678 Diaminopimelate epimerase 5 123 1.7E-24 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 DB34_02725 fcd1193b74688029a708a02a6eb86c90 270 Pfam PF01678 Diaminopimelate epimerase 147 256 2.1E-22 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 DB34_02725 fcd1193b74688029a708a02a6eb86c90 270 Gene3D G3DSA:3.10.310.10 115 252 6.9E-81 T 11-10-2018 DB34_02725 fcd1193b74688029a708a02a6eb86c90 270 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 265 32.254 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 DB34_08810 123b6131fccf4835e18857471dbefa70 464 Gene3D G3DSA:1.20.1720.10 11 255 7.4E-49 T 11-10-2018 DB34_08810 123b6131fccf4835e18857471dbefa70 464 Pfam PF07690 Major Facilitator Superfamily 16 404 8.8E-48 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DB34_08810 123b6131fccf4835e18857471dbefa70 464 SUPERFAMILY SSF103473 8 453 5.1E-60 T 11-10-2018 IPR036259 MFS transporter superfamily DB34_08810 123b6131fccf4835e18857471dbefa70 464 Gene3D G3DSA:1.20.1250.20 256 455 1.7E-13 T 11-10-2018 DB34_08810 123b6131fccf4835e18857471dbefa70 464 PRINTS PR01036 Tetracycline resistance protein TetB signature 104 124 1.4E-11 T 11-10-2018 DB34_08810 123b6131fccf4835e18857471dbefa70 464 PRINTS PR01036 Tetracycline resistance protein TetB signature 134 158 1.4E-11 T 11-10-2018 DB34_08810 123b6131fccf4835e18857471dbefa70 464 PRINTS PR01036 Tetracycline resistance protein TetB signature 334 354 1.4E-11 T 11-10-2018 DB34_08810 123b6131fccf4835e18857471dbefa70 464 PRINTS PR01036 Tetracycline resistance protein TetB signature 13 37 1.4E-11 T 11-10-2018 DB34_08810 123b6131fccf4835e18857471dbefa70 464 PRINTS PR01036 Tetracycline resistance protein TetB signature 199 217 1.4E-11 T 11-10-2018 DB34_08810 123b6131fccf4835e18857471dbefa70 464 PRINTS PR01036 Tetracycline resistance protein TetB signature 396 415 1.4E-11 T 11-10-2018 DB34_07310 e0273cf61b66c9e2c90ad3988d24aa7e 201 Gene3D G3DSA:3.40.50.150 3 179 2.9E-19 T 11-10-2018 DB34_07310 e0273cf61b66c9e2c90ad3988d24aa7e 201 Pfam PF07021 Methionine biosynthesis protein MetW 2 196 1.7E-69 T 11-10-2018 IPR010743 Methionine biosynthesis MetW KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 DB34_07310 e0273cf61b66c9e2c90ad3988d24aa7e 201 SUPERFAMILY SSF53335 6 173 8.67E-24 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB34_07310 e0273cf61b66c9e2c90ad3988d24aa7e 201 TIGRFAM TIGR02081 metW: methionine biosynthesis protein MetW 2 196 2.1E-65 T 11-10-2018 IPR010743 Methionine biosynthesis MetW KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 DB34_01145 ec33536861cdfbf2a7f72b2d5d5d7e05 400 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 236 249 - T 11-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 DB34_01145 ec33536861cdfbf2a7f72b2d5d5d7e05 400 Pfam PF00155 Aminotransferase class I and II 32 392 1.4E-77 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DB34_01145 ec33536861cdfbf2a7f72b2d5d5d7e05 400 Gene3D G3DSA:3.40.640.10 63 286 1.1E-130 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB34_01145 ec33536861cdfbf2a7f72b2d5d5d7e05 400 Gene3D G3DSA:3.90.1150.10 26 392 1.1E-130 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB34_01145 ec33536861cdfbf2a7f72b2d5d5d7e05 400 SUPERFAMILY SSF53383 2 398 7.53E-113 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB34_02025 711c2e25d514a2a0f6febcb855cba283 342 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 46 271 3.3E-58 T 11-10-2018 IPR003788 Protein arginine methyltransferase NDUFAF7 Reactome: R-HSA-6799198 DB34_02025 711c2e25d514a2a0f6febcb855cba283 342 SUPERFAMILY SSF53335 10 336 5.48E-89 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB34_02025 711c2e25d514a2a0f6febcb855cba283 342 Gene3D G3DSA:3.40.50.12710 12 340 1.4E-85 T 11-10-2018 IPR038375 Protein arginine methyltransferase NDUFAF7 superfamily Reactome: R-HSA-6799198 DB34_07835 7b7956119ec1bc2f598eaab0738119ee 171 Pfam PF01252 Signal peptidase (SPase) II 18 157 4.8E-34 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DB34_07835 7b7956119ec1bc2f598eaab0738119ee 171 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 9 164 13.576 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DB34_07835 7b7956119ec1bc2f598eaab0738119ee 171 TIGRFAM TIGR00077 lspA: signal peptidase II 16 163 1.1E-29 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DB34_07835 7b7956119ec1bc2f598eaab0738119ee 171 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 57 65 4.0E-11 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DB34_07835 7b7956119ec1bc2f598eaab0738119ee 171 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 139 155 4.0E-11 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DB34_07835 7b7956119ec1bc2f598eaab0738119ee 171 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 103 118 4.0E-11 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DB34_07565 34a204e317a4b385609f43fb8698fb90 477 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 334 476 2.2E-58 T 11-10-2018 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 DB34_07565 34a204e317a4b385609f43fb8698fb90 477 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 3 312 3.8E-114 T 11-10-2018 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 DB34_07565 34a204e317a4b385609f43fb8698fb90 477 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 46 69 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 DB34_07565 34a204e317a4b385609f43fb8698fb90 477 Pfam PF00294 pfkB family carbohydrate kinase 8 303 3.8E-38 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB DB34_07565 34a204e317a4b385609f43fb8698fb90 477 SUPERFAMILY SSF53613 7 311 1.14E-51 T 11-10-2018 IPR029056 Ribokinase-like DB34_07565 34a204e317a4b385609f43fb8698fb90 477 Hamap MF_01603 Bifunctional protein HldE [hldE]. 1 477 40.863 T 11-10-2018 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 DB34_07565 34a204e317a4b385609f43fb8698fb90 477 Gene3D G3DSA:3.40.50.620 330 477 2.5E-36 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DB34_07565 34a204e317a4b385609f43fb8698fb90 477 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 345 410 9.1E-16 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 DB34_07565 34a204e317a4b385609f43fb8698fb90 477 Gene3D G3DSA:3.40.1190.20 1 311 8.2E-103 T 11-10-2018 IPR029056 Ribokinase-like DB34_07565 34a204e317a4b385609f43fb8698fb90 477 Pfam PF01467 Cytidylyltransferase-like 348 438 6.9E-15 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 DB34_07565 34a204e317a4b385609f43fb8698fb90 477 SUPERFAMILY SSF52374 344 474 5.35E-23 T 11-10-2018 DB34_08030 115e31129b6e7f494552f946ab6b9d6c 301 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 83 105 - T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 DB34_08030 115e31129b6e7f494552f946ab6b9d6c 301 Pfam PF01066 CDP-alcohol phosphatidyltransferase 42 105 5.4E-13 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 DB34_08030 115e31129b6e7f494552f946ab6b9d6c 301 Pfam PF08009 CDP-alcohol phosphatidyltransferase 2 233 269 3.1E-11 T 11-10-2018 IPR012616 CDP-alcohol phosphatidyltransferase, C-terminal DB34_08030 115e31129b6e7f494552f946ab6b9d6c 301 Gene3D G3DSA:1.20.120.1760 21 217 1.7E-16 T 11-10-2018 DB34_00650 dc091d30926a46800734b73c0671c671 1139 Pfam PF14579 Helix-hairpin-helix motif 796 887 1.8E-26 T 11-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DB34_00650 dc091d30926a46800734b73c0671c671 1139 Gene3D G3DSA:3.20.20.140 1 269 2.9E-78 T 11-10-2018 DB34_00650 dc091d30926a46800734b73c0671c671 1139 SMART SM00481 7 74 3.8E-17 T 11-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal DB34_00650 dc091d30926a46800734b73c0671c671 1139 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 293 721 2.6E-173 T 11-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DB34_00650 dc091d30926a46800734b73c0671c671 1139 Pfam PF02811 PHP domain 8 174 2.0E-29 T 11-10-2018 IPR004013 PHP domain GO:0003824 DB34_00650 dc091d30926a46800734b73c0671c671 1139 Gene3D G3DSA:1.10.10.1600 432 507 6.7E-26 T 11-10-2018 DB34_00650 dc091d30926a46800734b73c0671c671 1139 SUPERFAMILY SSF89550 6 263 3.14E-7 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 DB34_00650 dc091d30926a46800734b73c0671c671 1139 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1019 0.0 T 11-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DB34_00650 dc091d30926a46800734b73c0671c671 1139 Pfam PF01336 OB-fold nucleic acid binding domain 982 1059 8.7E-7 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 DB34_02395 9e48012a4527f747d4911224ba92c04e 263 PIRSF PIRSF015736 6 263 1.7E-62 T 11-10-2018 IPR026286 Maleate isomerase/Arylmalonate decarboxylase DB34_02395 9e48012a4527f747d4911224ba92c04e 263 Gene3D G3DSA:3.40.50.12500 17 263 3.2E-80 T 11-10-2018 DB34_02395 9e48012a4527f747d4911224ba92c04e 263 Hamap MF_00943 Maleate isomerase [maiA]. 18 263 49.206 T 11-10-2018 IPR028615 Maleate isomerase GO:0050076 KEGG: 00650+5.2.1.1|KEGG: 00760+5.2.1.1|MetaCyc: PWY-5033|MetaCyc: PWY-6993|MetaCyc: PWY-7128|MetaCyc: PWY-722 DB34_00325 26feda290d6808de67e6379cc47aaf39 375 SUPERFAMILY SSF53633 13 264 1.83E-62 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DB34_00325 26feda290d6808de67e6379cc47aaf39 375 SUPERFAMILY SSF88697 285 374 3.88E-25 T 11-10-2018 IPR015947 PUA-like superfamily DB34_00325 26feda290d6808de67e6379cc47aaf39 375 PRINTS PR00474 Glutamate 5-kinase family signature 125 146 7.7E-44 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 DB34_00325 26feda290d6808de67e6379cc47aaf39 375 PRINTS PR00474 Glutamate 5-kinase family signature 85 113 7.7E-44 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 DB34_00325 26feda290d6808de67e6379cc47aaf39 375 PRINTS PR00474 Glutamate 5-kinase family signature 51 65 7.7E-44 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 DB34_00325 26feda290d6808de67e6379cc47aaf39 375 PRINTS PR00474 Glutamate 5-kinase family signature 157 184 7.7E-44 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 DB34_00325 26feda290d6808de67e6379cc47aaf39 375 PRINTS PR00474 Glutamate 5-kinase family signature 218 238 7.7E-44 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 DB34_00325 26feda290d6808de67e6379cc47aaf39 375 Pfam PF00696 Amino acid kinase family 13 242 1.2E-40 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 DB34_00325 26feda290d6808de67e6379cc47aaf39 375 Pfam PF01472 PUA domain 285 358 1.0E-20 T 11-10-2018 IPR002478 PUA domain GO:0003723 DB34_00325 26feda290d6808de67e6379cc47aaf39 375 Hamap MF_00456 Glutamate 5-kinase [proB]. 13 267 34.001 T 11-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 DB34_00325 26feda290d6808de67e6379cc47aaf39 375 TIGRFAM TIGR01027 proB: glutamate 5-kinase 13 373 2.4E-118 T 11-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 DB34_00325 26feda290d6808de67e6379cc47aaf39 375 Gene3D G3DSA:3.40.1160.10 5 268 1.3E-79 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DB34_00325 26feda290d6808de67e6379cc47aaf39 375 Gene3D G3DSA:2.30.130.10 274 375 1.8E-31 T 11-10-2018 IPR036974 PUA domain superfamily GO:0003723 DB34_00325 26feda290d6808de67e6379cc47aaf39 375 SMART SM00359 285 367 1.1E-16 T 11-10-2018 IPR002478 PUA domain GO:0003723 DB34_00325 26feda290d6808de67e6379cc47aaf39 375 PIRSF PIRSF000729 8 375 1.0E-117 T 11-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 DB34_01475 4bb0be8bb01e8b75301b517cde570531 248 Pfam PF01553 Acyltransferase 79 191 2.0E-15 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 DB34_01475 4bb0be8bb01e8b75301b517cde570531 248 SUPERFAMILY SSF69593 11 195 9.02E-22 T 11-10-2018 DB34_01475 4bb0be8bb01e8b75301b517cde570531 248 SMART SM00563 85 194 4.8E-16 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 DB34_04895 b3f57c4ae1618d2237329098ba63bfa8 320 SUPERFAMILY SSF53850 93 307 6.88E-38 T 11-10-2018 DB34_04895 b3f57c4ae1618d2237329098ba63bfa8 320 Pfam PF03466 LysR substrate binding domain 93 301 1.7E-41 T 11-10-2018 IPR005119 LysR, substrate-binding DB34_04895 b3f57c4ae1618d2237329098ba63bfa8 320 Gene3D G3DSA:3.40.190.10 166 276 1.5E-62 T 11-10-2018 DB34_04895 b3f57c4ae1618d2237329098ba63bfa8 320 Gene3D G3DSA:1.10.10.10 5 90 5.3E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB34_04895 b3f57c4ae1618d2237329098ba63bfa8 320 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 7.5E-14 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB34_04895 b3f57c4ae1618d2237329098ba63bfa8 320 SUPERFAMILY SSF46785 6 115 1.58E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB34_04895 b3f57c4ae1618d2237329098ba63bfa8 320 Gene3D G3DSA:3.40.190.10 97 299 1.5E-62 T 11-10-2018 DB34_04175 dfb699b2617010f1b131a56edbebfff5 260 SUPERFAMILY SSF54292 28 127 5.52E-31 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 DB34_04175 dfb699b2617010f1b131a56edbebfff5 260 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 171 182 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DB34_04175 dfb699b2617010f1b131a56edbebfff5 260 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 29 130 8.7E-31 T 11-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 DB34_04175 dfb699b2617010f1b131a56edbebfff5 260 Gene3D G3DSA:1.10.1060.10 129 260 1.6E-53 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DB34_04175 dfb699b2617010f1b131a56edbebfff5 260 SUPERFAMILY SSF46548 132 258 2.09E-35 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DB34_04175 dfb699b2617010f1b131a56edbebfff5 260 Pfam PF13534 4Fe-4S dicluster domain 170 243 8.7E-9 T 11-10-2018 DB34_04175 dfb699b2617010f1b131a56edbebfff5 260 Gene3D G3DSA:3.10.20.30 19 128 7.7E-42 T 11-10-2018 IPR012675 Beta-grasp domain superfamily DB34_04175 dfb699b2617010f1b131a56edbebfff5 260 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 80 88 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 DB34_04175 dfb699b2617010f1b131a56edbebfff5 260 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 32 252 6.7E-79 T 11-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 DB34_12265 21bd00493d90cb9eba89845bfcdc6e07 438 Hamap MF_01570 Proline--tRNA ligase [proS]. 1 437 61.059 T 11-10-2018 IPR023716 Proline-tRNA ligase, class IIa, type 2 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 DB34_12265 21bd00493d90cb9eba89845bfcdc6e07 438 Pfam PF03129 Anticodon binding domain 349 435 2.6E-14 T 11-10-2018 IPR004154 Anticodon-binding DB34_12265 21bd00493d90cb9eba89845bfcdc6e07 438 SUPERFAMILY SSF52954 336 436 5.56E-24 T 11-10-2018 DB34_12265 21bd00493d90cb9eba89845bfcdc6e07 438 SUPERFAMILY SSF55681 9 351 2.59E-89 T 11-10-2018 DB34_12265 21bd00493d90cb9eba89845bfcdc6e07 438 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 223 1.1E-95 T 11-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 DB34_12265 21bd00493d90cb9eba89845bfcdc6e07 438 Gene3D G3DSA:3.30.930.10 1 334 6.9E-106 T 11-10-2018 DB34_12265 21bd00493d90cb9eba89845bfcdc6e07 438 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 330 1.2E-31 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB34_12265 21bd00493d90cb9eba89845bfcdc6e07 438 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 3.9E-15 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 DB34_12265 21bd00493d90cb9eba89845bfcdc6e07 438 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 3.9E-15 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 DB34_12265 21bd00493d90cb9eba89845bfcdc6e07 438 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 3.9E-15 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 DB34_12265 21bd00493d90cb9eba89845bfcdc6e07 438 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 3.9E-15 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 DB34_12265 21bd00493d90cb9eba89845bfcdc6e07 438 Gene3D G3DSA:3.40.50.800 335 437 4.0E-25 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily DB34_08020 71f5bbce6732168bc0d3c27304a085bd 498 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 268 415 1.8E-13 T 11-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_08020 71f5bbce6732168bc0d3c27304a085bd 498 Gene3D G3DSA:1.10.645.20 148 498 3.4E-62 T 11-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_08020 71f5bbce6732168bc0d3c27304a085bd 498 SUPERFAMILY SSF143243 21 153 1.31E-5 T 11-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_08020 71f5bbce6732168bc0d3c27304a085bd 498 SUPERFAMILY SSF56762 159 495 6.02E-52 T 11-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_03475 f8c7fb7f00f78e716ca7da76ea8f1173 872 SMART SM00382 514 719 0.0039 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_03475 f8c7fb7f00f78e716ca7da76ea8f1173 872 SUPERFAMILY SSF52540 483 769 1.06E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_03475 f8c7fb7f00f78e716ca7da76ea8f1173 872 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 24 193 1.6E-24 T 11-10-2018 IPR025199 DNA translocase FtsK, 4TM region DB34_03475 f8c7fb7f00f78e716ca7da76ea8f1173 872 Pfam PF01580 FtsK/SpoIIIE family 479 698 3.6E-66 T 11-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 DB34_03475 f8c7fb7f00f78e716ca7da76ea8f1173 872 Gene3D G3DSA:1.10.10.10 808 870 1.3E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB34_03475 f8c7fb7f00f78e716ca7da76ea8f1173 872 SUPERFAMILY SSF46785 804 869 5.72E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB34_03475 f8c7fb7f00f78e716ca7da76ea8f1173 872 Gene3D G3DSA:3.30.980.40 371 475 4.5E-29 T 11-10-2018 DB34_03475 f8c7fb7f00f78e716ca7da76ea8f1173 872 SMART SM00843 804 869 2.3E-34 T 11-10-2018 IPR018541 FtsK gamma domain DB34_03475 f8c7fb7f00f78e716ca7da76ea8f1173 872 Pfam PF09397 Ftsk gamma domain 807 866 4.8E-26 T 11-10-2018 IPR018541 FtsK gamma domain DB34_03475 f8c7fb7f00f78e716ca7da76ea8f1173 872 Gene3D G3DSA:3.40.50.300 476 783 1.6E-114 T 11-10-2018 DB34_12750 240d302580bce1f69eabe9ee1384d665 231 SUPERFAMILY SSF89392 63 225 7.45E-28 T 11-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX DB34_12750 240d302580bce1f69eabe9ee1384d665 231 Gene3D G3DSA:2.50.20.10 60 230 3.1E-24 T 11-10-2018 DB34_12750 240d302580bce1f69eabe9ee1384d665 231 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 72 225 1.9E-27 T 11-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like DB34_01470 fdf5028847c94fbd102f64c7b2f758af 206 SUPERFAMILY SSF52833 42 201 7.77E-28 T 11-10-2018 IPR036249 Thioredoxin-like superfamily DB34_01470 fdf5028847c94fbd102f64c7b2f758af 206 Gene3D G3DSA:3.40.30.10 39 200 7.6E-32 T 11-10-2018 DB34_01470 fdf5028847c94fbd102f64c7b2f758af 206 Pfam PF02630 SCO1/SenC 18 179 1.7E-15 T 11-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB34_06075 7ea1213deb98922e24a54248cf992bbb 328 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 10 281 1.1E-18 T 11-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 DB34_06075 7ea1213deb98922e24a54248cf992bbb 328 Gene3D G3DSA:3.30.420.40 111 289 2.5E-55 T 11-10-2018 DB34_06075 7ea1213deb98922e24a54248cf992bbb 328 SUPERFAMILY SSF53067 113 314 9.07E-32 T 11-10-2018 DB34_06075 7ea1213deb98922e24a54248cf992bbb 328 Gene3D G3DSA:3.30.420.40 7 299 2.5E-55 T 11-10-2018 DB34_06075 7ea1213deb98922e24a54248cf992bbb 328 SUPERFAMILY SSF53067 6 109 1.19E-12 T 11-10-2018 DB34_12585 9ae72bb190cefc4c4c43458c352ebb99 293 SUPERFAMILY SSF46785 2 111 2.88E-25 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB34_12585 9ae72bb190cefc4c4c43458c352ebb99 293 Gene3D G3DSA:1.10.10.10 1 92 5.0E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB34_12585 9ae72bb190cefc4c4c43458c352ebb99 293 Pfam PF03466 LysR substrate binding domain 88 290 2.6E-37 T 11-10-2018 IPR005119 LysR, substrate-binding DB34_12585 9ae72bb190cefc4c4c43458c352ebb99 293 SUPERFAMILY SSF53850 89 290 1.32E-40 T 11-10-2018 DB34_12585 9ae72bb190cefc4c4c43458c352ebb99 293 Gene3D G3DSA:3.40.190.290 93 289 1.7E-46 T 11-10-2018 DB34_12585 9ae72bb190cefc4c4c43458c352ebb99 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.8E-22 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB34_12585 9ae72bb190cefc4c4c43458c352ebb99 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.3E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB34_12585 9ae72bb190cefc4c4c43458c352ebb99 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.3E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB34_12585 9ae72bb190cefc4c4c43458c352ebb99 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.3E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB34_00705 5b646d99b99d74ffd215b81d8f99341d 70 Pfam PF00403 Heavy-metal-associated domain 8 68 3.6E-19 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 DB34_00705 5b646d99b99d74ffd215b81d8f99341d 70 SUPERFAMILY SSF55008 4 69 6.68E-22 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 DB34_00705 5b646d99b99d74ffd215b81d8f99341d 70 PRINTS PR00946 Mercury scavenger protein signature 44 58 8.1E-12 T 11-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 DB34_00705 5b646d99b99d74ffd215b81d8f99341d 70 PRINTS PR00946 Mercury scavenger protein signature 13 29 8.1E-12 T 11-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 DB34_00705 5b646d99b99d74ffd215b81d8f99341d 70 PRINTS PR00946 Mercury scavenger protein signature 29 44 8.1E-12 T 11-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 DB34_00705 5b646d99b99d74ffd215b81d8f99341d 70 PRINTS PR00946 Mercury scavenger protein signature 58 70 8.1E-12 T 11-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 DB34_00705 5b646d99b99d74ffd215b81d8f99341d 70 PRINTS PR00946 Mercury scavenger protein signature 2 13 8.1E-12 T 11-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 DB34_00705 5b646d99b99d74ffd215b81d8f99341d 70 ProSitePatterns PS01047 Heavy-metal-associated domain. 10 39 - T 11-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 DB34_00705 5b646d99b99d74ffd215b81d8f99341d 70 Gene3D G3DSA:3.30.70.100 3 70 2.5E-22 T 11-10-2018 DB34_00510 46d2dab02b9e6bd2e34515137b489e5b 790 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 222 783 3.5E-191 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DB34_00510 46d2dab02b9e6bd2e34515137b489e5b 790 Gene3D G3DSA:2.70.150.20 278 388 7.0E-38 T 11-10-2018 DB34_00510 46d2dab02b9e6bd2e34515137b489e5b 790 Pfam PF00403 Heavy-metal-associated domain 7 65 6.8E-11 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 DB34_00510 46d2dab02b9e6bd2e34515137b489e5b 790 Pfam PF00403 Heavy-metal-associated domain 77 132 7.7E-12 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 DB34_00510 46d2dab02b9e6bd2e34515137b489e5b 790 SUPERFAMILY SSF81665 238 478 2.09E-11 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 DB34_00510 46d2dab02b9e6bd2e34515137b489e5b 790 Pfam PF00702 haloacid dehalogenase-like hydrolase 481 695 8.2E-49 T 11-10-2018 DB34_00510 46d2dab02b9e6bd2e34515137b489e5b 790 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 486 492 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 DB34_00510 46d2dab02b9e6bd2e34515137b489e5b 790 SUPERFAMILY SSF81653 286 384 3.4E-27 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 DB34_00510 46d2dab02b9e6bd2e34515137b489e5b 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 681 700 9.2E-26 T 11-10-2018 DB34_00510 46d2dab02b9e6bd2e34515137b489e5b 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 704 716 9.2E-26 T 11-10-2018 DB34_00510 46d2dab02b9e6bd2e34515137b489e5b 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 628 638 9.2E-26 T 11-10-2018 DB34_00510 46d2dab02b9e6bd2e34515137b489e5b 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 484 498 9.2E-26 T 11-10-2018 DB34_00510 46d2dab02b9e6bd2e34515137b489e5b 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 334 348 9.2E-26 T 11-10-2018 DB34_00510 46d2dab02b9e6bd2e34515137b489e5b 790 Gene3D G3DSA:3.40.50.1000 465 733 1.3E-92 T 11-10-2018 IPR023214 HAD superfamily DB34_00510 46d2dab02b9e6bd2e34515137b489e5b 790 Pfam PF00122 E1-E2 ATPase 285 463 8.7E-54 T 11-10-2018 DB34_00510 46d2dab02b9e6bd2e34515137b489e5b 790 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 6 66 3.7E-10 T 11-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 DB34_00510 46d2dab02b9e6bd2e34515137b489e5b 790 Gene3D G3DSA:3.30.70.100 1 71 1.1E-16 T 11-10-2018 DB34_00510 46d2dab02b9e6bd2e34515137b489e5b 790 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 257 758 6.7E-95 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DB34_00510 46d2dab02b9e6bd2e34515137b489e5b 790 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 204 783 1.3E-180 T 11-10-2018 DB34_00510 46d2dab02b9e6bd2e34515137b489e5b 790 Gene3D G3DSA:3.30.70.100 72 137 3.4E-18 T 11-10-2018 DB34_00510 46d2dab02b9e6bd2e34515137b489e5b 790 ProSitePatterns PS01047 Heavy-metal-associated domain. 9 37 - T 11-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 DB34_00510 46d2dab02b9e6bd2e34515137b489e5b 790 ProSitePatterns PS01047 Heavy-metal-associated domain. 76 104 - T 11-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 DB34_00510 46d2dab02b9e6bd2e34515137b489e5b 790 Gene3D G3DSA:3.40.1110.10 495 613 1.3E-92 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 DB34_00510 46d2dab02b9e6bd2e34515137b489e5b 790 SUPERFAMILY SSF55008 70 139 6.28E-18 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 DB34_00510 46d2dab02b9e6bd2e34515137b489e5b 790 SUPERFAMILY SSF55008 2 69 9.95E-17 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 DB34_00510 46d2dab02b9e6bd2e34515137b489e5b 790 SUPERFAMILY SSF56784 482 781 1.98E-55 T 11-10-2018 IPR036412 HAD-like superfamily DB34_01805 d46524e9e6ff422b840b7288f8abdd44 530 Pfam PF04966 Carbohydrate-selective porin, OprB family 160 526 3.5E-64 T 11-10-2018 IPR007049 Carbohydrate-selective porin OprB GO:0008643|GO:0015288|GO:0016021 DB34_01805 d46524e9e6ff422b840b7288f8abdd44 530 Gene3D G3DSA:2.40.160.180 119 529 2.3E-94 T 11-10-2018 IPR038673 Carbohydrate-selective porin OprB superfamily DB34_06235 147f66e81ccae94afa77a32189c1accd 251 SMART SM00507 163 226 3.2E-5 T 11-10-2018 IPR003615 HNH nuclease DB34_06235 147f66e81ccae94afa77a32189c1accd 251 Pfam PF01844 HNH endonuclease 176 230 8.1E-11 T 11-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 DB34_12495 ed323285adf22a3cb27d837f6b3d8ba4 996 Gene3D G3DSA:3.30.70.260 907 988 1.5E-8 T 11-10-2018 DB34_12495 ed323285adf22a3cb27d837f6b3d8ba4 996 Pfam PF01909 Nucleotidyltransferase domain 131 191 2.4E-4 T 11-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 DB34_12495 ed323285adf22a3cb27d837f6b3d8ba4 996 PIRSF PIRSF006288 51 987 0.0 T 11-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 DB34_12495 ed323285adf22a3cb27d837f6b3d8ba4 996 Pfam PF08335 GlnD PII-uridylyltransferase 237 379 3.6E-34 T 11-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 DB34_12495 ed323285adf22a3cb27d837f6b3d8ba4 996 Gene3D G3DSA:1.10.3210.10 543 689 2.9E-7 T 11-10-2018 DB34_12495 ed323285adf22a3cb27d837f6b3d8ba4 996 SUPERFAMILY SSF55021 906 980 4.58E-12 T 11-10-2018 DB34_12495 ed323285adf22a3cb27d837f6b3d8ba4 996 Pfam PF01966 HD domain 557 669 9.0E-10 T 11-10-2018 IPR006674 HD domain DB34_12495 ed323285adf22a3cb27d837f6b3d8ba4 996 SUPERFAMILY SSF81593 243 377 6.28E-11 T 11-10-2018 DB34_12495 ed323285adf22a3cb27d837f6b3d8ba4 996 SUPERFAMILY SSF109604 521 646 8.47E-14 T 11-10-2018 DB34_12495 ed323285adf22a3cb27d837f6b3d8ba4 996 SUPERFAMILY SSF55021 793 861 2.48E-9 T 11-10-2018 DB34_12495 ed323285adf22a3cb27d837f6b3d8ba4 996 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 55 994 247.26 T 11-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 DB34_12495 ed323285adf22a3cb27d837f6b3d8ba4 996 SMART SM00471 551 698 0.0033 T 11-10-2018 IPR003607 HD/PDEase domain DB34_12495 ed323285adf22a3cb27d837f6b3d8ba4 996 Pfam PF01842 ACT domain 909 975 2.1E-6 T 11-10-2018 IPR002912 ACT domain DB34_12495 ed323285adf22a3cb27d837f6b3d8ba4 996 SUPERFAMILY SSF81301 40 225 4.85E-27 T 11-10-2018 DB34_08635 6311d3e8e911615f2c11cbe88a65d4b8 227 Gene3D G3DSA:2.40.50.620 32 97 3.3E-26 T 11-10-2018 DB34_08635 6311d3e8e911615f2c11cbe88a65d4b8 227 SUPERFAMILY SSF50447 1 213 6.89E-81 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DB34_08635 6311d3e8e911615f2c11cbe88a65d4b8 227 ProSitePatterns PS00474 Ribosomal protein L3 signature. 102 125 - T 11-10-2018 IPR019926 Ribosomal protein L3, conserved site DB34_08635 6311d3e8e911615f2c11cbe88a65d4b8 227 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 208 36.606 T 11-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_08635 6311d3e8e911615f2c11cbe88a65d4b8 227 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 205 1.2E-85 T 11-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_08635 6311d3e8e911615f2c11cbe88a65d4b8 227 Pfam PF00297 Ribosomal protein L3 65 182 9.9E-14 T 11-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_08635 6311d3e8e911615f2c11cbe88a65d4b8 227 Gene3D G3DSA:2.40.30.10 129 211 1.4E-16 T 11-10-2018 DB34_10130 d8a3597d7afe2711d82090aacb8af613 374 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 373 9.4E-83 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 DB34_10130 d8a3597d7afe2711d82090aacb8af613 374 Gene3D G3DSA:3.70.10.10 139 372 2.9E-113 T 11-10-2018 DB34_10130 d8a3597d7afe2711d82090aacb8af613 374 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 252 373 2.3E-27 T 11-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 DB34_10130 d8a3597d7afe2711d82090aacb8af613 374 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 120 1.5E-28 T 11-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 DB34_10130 d8a3597d7afe2711d82090aacb8af613 374 SUPERFAMILY SSF55979 127 250 4.93E-25 T 11-10-2018 DB34_10130 d8a3597d7afe2711d82090aacb8af613 374 PIRSF PIRSF000804 1 374 4.9E-109 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 DB34_10130 d8a3597d7afe2711d82090aacb8af613 374 SUPERFAMILY SSF55979 251 374 3.93E-30 T 11-10-2018 DB34_10130 d8a3597d7afe2711d82090aacb8af613 374 Pfam PF02767 DNA polymerase III beta subunit, central domain 131 249 2.1E-31 T 11-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 DB34_10130 d8a3597d7afe2711d82090aacb8af613 374 SMART SM00480 17 370 5.4E-116 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 DB34_10130 d8a3597d7afe2711d82090aacb8af613 374 SUPERFAMILY SSF55979 1 118 3.36E-22 T 11-10-2018 DB34_10130 d8a3597d7afe2711d82090aacb8af613 374 Gene3D G3DSA:3.10.150.10 1 248 2.9E-113 T 11-10-2018 DB34_02375 abcf065cec916cf240b3a70184e22b02 546 Gene3D G3DSA:1.20.1250.20 32 456 1.3E-15 T 11-10-2018 DB34_02375 abcf065cec916cf240b3a70184e22b02 546 SUPERFAMILY SSF103473 26 530 1.07E-30 T 11-10-2018 IPR036259 MFS transporter superfamily DB34_02375 abcf065cec916cf240b3a70184e22b02 546 Pfam PF07690 Major Facilitator Superfamily 56 436 3.2E-21 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DB34_04295 0068679a3253d0a989e5d07437e58ac7 449 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 19 446 31.458 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 DB34_04295 0068679a3253d0a989e5d07437e58ac7 449 Gene3D G3DSA:3.65.10.10 21 440 1.0E-146 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 DB34_04295 0068679a3253d0a989e5d07437e58ac7 449 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 23 445 6.0E-124 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 DB34_04295 0068679a3253d0a989e5d07437e58ac7 449 PIRSF PIRSF000505 10 448 1.4E-121 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 DB34_04295 0068679a3253d0a989e5d07437e58ac7 449 Gene3D G3DSA:3.65.10.10 31 245 1.0E-146 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 DB34_04295 0068679a3253d0a989e5d07437e58ac7 449 ProSitePatterns PS00885 EPSP synthase signature 2. 355 373 - T 11-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 DB34_04295 0068679a3253d0a989e5d07437e58ac7 449 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 17 438 5.1E-103 T 11-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 DB34_04295 0068679a3253d0a989e5d07437e58ac7 449 SUPERFAMILY SSF55205 17 445 3.43E-122 T 11-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 DB34_04295 0068679a3253d0a989e5d07437e58ac7 449 ProSitePatterns PS00104 EPSP synthase signature 1. 98 112 - T 11-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 DB34_11975 5b52745354c46f62fcc84e36c43065f1 529 Gene3D G3DSA:3.40.640.10 161 380 4.8E-212 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB34_11975 5b52745354c46f62fcc84e36c43065f1 529 Gene3D G3DSA:3.90.1150.10 30 522 4.8E-212 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB34_11975 5b52745354c46f62fcc84e36c43065f1 529 TIGRFAM TIGR03801 asp_4_decarbox: aspartate 4-decarboxylase 11 524 2.9E-232 T 11-10-2018 IPR022518 Aspartate 4-decarboxylase KEGG: 00220+2.6.1.1|KEGG: 00250+4.1.1.12+2.6.1.1|KEGG: 00270+4.1.1.12+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 DB34_11975 5b52745354c46f62fcc84e36c43065f1 529 Gene3D G3DSA:1.10.20.110 37 403 4.8E-212 T 11-10-2018 DB34_11975 5b52745354c46f62fcc84e36c43065f1 529 Pfam PF00155 Aminotransferase class I and II 159 503 1.6E-22 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DB34_11975 5b52745354c46f62fcc84e36c43065f1 529 SUPERFAMILY SSF53383 146 520 4.17E-44 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB34_11975 5b52745354c46f62fcc84e36c43065f1 529 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 310 323 - T 11-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 DB34_05550 b53131ef11b8628fc13a837cdb60b683 89 Pfam PF00589 Phage integrase family 17 61 3.0E-5 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 DB34_05550 b53131ef11b8628fc13a837cdb60b683 89 Gene3D G3DSA:1.10.443.10 4 73 4.1E-8 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 DB34_05550 b53131ef11b8628fc13a837cdb60b683 89 SUPERFAMILY SSF56349 15 71 2.47E-11 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DB34_04430 3a51c216583e38a9c34665273c48a6e4 744 Pfam PF04632 Fusaric acid resistance protein family 47 731 3.7E-133 T 11-10-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0022857|GO:0055085 DB34_03355 564691128933efbc7429c52ad98d3855 522 SUPERFAMILY SSF50494 58 283 1.37E-67 T 11-10-2018 IPR009003 Peptidase S1, PA clan DB34_03355 564691128933efbc7429c52ad98d3855 522 Gene3D G3DSA:2.30.42.10 286 400 1.5E-25 T 11-10-2018 DB34_03355 564691128933efbc7429c52ad98d3855 522 Pfam PF13180 PDZ domain 320 388 3.8E-15 T 11-10-2018 IPR001478 PDZ domain GO:0005515 DB34_03355 564691128933efbc7429c52ad98d3855 522 Pfam PF13180 PDZ domain 422 498 3.8E-10 T 11-10-2018 IPR001478 PDZ domain GO:0005515 DB34_03355 564691128933efbc7429c52ad98d3855 522 SUPERFAMILY SSF50156 412 504 2.37E-19 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 DB34_03355 564691128933efbc7429c52ad98d3855 522 Gene3D G3DSA:2.40.10.120 58 284 3.1E-80 T 11-10-2018 DB34_03355 564691128933efbc7429c52ad98d3855 522 SUPERFAMILY SSF50156 321 437 1.08E-22 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 DB34_03355 564691128933efbc7429c52ad98d3855 522 Pfam PF13365 Trypsin-like peptidase domain 117 251 2.1E-36 T 11-10-2018 DB34_03355 564691128933efbc7429c52ad98d3855 522 SMART SM00228 291 380 3.6E-9 T 11-10-2018 IPR001478 PDZ domain GO:0005515 DB34_03355 564691128933efbc7429c52ad98d3855 522 SMART SM00228 411 495 1.9E-11 T 11-10-2018 IPR001478 PDZ domain GO:0005515 DB34_03355 564691128933efbc7429c52ad98d3855 522 Gene3D G3DSA:2.30.42.10 408 505 1.2E-21 T 11-10-2018 DB34_03355 564691128933efbc7429c52ad98d3855 522 PRINTS PR00834 HtrA/DegQ protease family signature 147 167 1.4E-53 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DB34_03355 564691128933efbc7429c52ad98d3855 522 PRINTS PR00834 HtrA/DegQ protease family signature 338 350 1.4E-53 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DB34_03355 564691128933efbc7429c52ad98d3855 522 PRINTS PR00834 HtrA/DegQ protease family signature 126 138 1.4E-53 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DB34_03355 564691128933efbc7429c52ad98d3855 522 PRINTS PR00834 HtrA/DegQ protease family signature 244 261 1.4E-53 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DB34_03355 564691128933efbc7429c52ad98d3855 522 PRINTS PR00834 HtrA/DegQ protease family signature 222 239 1.4E-53 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DB34_03355 564691128933efbc7429c52ad98d3855 522 PRINTS PR00834 HtrA/DegQ protease family signature 188 212 1.4E-53 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DB34_03355 564691128933efbc7429c52ad98d3855 522 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 60 501 2.4E-139 T 11-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 DB34_00530 c12d4d199675bf9c91b8d00d168a6ce0 339 SUPERFAMILY SSF51735 1 183 9.56E-72 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily DB34_00530 c12d4d199675bf9c91b8d00d168a6ce0 339 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 184 327 1.0E-64 T 11-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 DB34_00530 c12d4d199675bf9c91b8d00d168a6ce0 339 PIRSF PIRSF000116 202 333 4.7E-16 T 11-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 DB34_00530 c12d4d199675bf9c91b8d00d168a6ce0 339 PIRSF PIRSF000116 4 206 1.3E-45 T 11-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 DB34_00530 c12d4d199675bf9c91b8d00d168a6ce0 339 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 14 327 1.6E-124 T 11-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 DB34_00530 c12d4d199675bf9c91b8d00d168a6ce0 339 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 1 329 44.689 T 11-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 DB34_00530 c12d4d199675bf9c91b8d00d168a6ce0 339 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 14 178 2.4E-72 T 11-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 DB34_00530 c12d4d199675bf9c91b8d00d168a6ce0 339 Gene3D G3DSA:3.40.50.720 1 182 1.0E-73 T 11-10-2018 DB34_00530 c12d4d199675bf9c91b8d00d168a6ce0 339 SUPERFAMILY SSF48179 184 333 2.21E-71 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DB34_00530 c12d4d199675bf9c91b8d00d168a6ce0 339 Gene3D G3DSA:1.10.3730.40 183 339 3.0E-74 T 11-10-2018 DB34_07700 fa6a74eec88c92b107a69f813450aaca 116 Pfam PF04241 Protein of unknown function (DUF423) 13 98 8.2E-12 T 11-10-2018 IPR006696 Protein of unknown function DUF423 DB34_04055 a32772486ef1a5ce5f0b98315f38d4fb 410 SUPERFAMILY SSF52540 16 211 1.18E-11 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_04055 a32772486ef1a5ce5f0b98315f38d4fb 410 Pfam PF09848 Uncharacterized conserved protein (DUF2075) 48 395 5.1E-106 T 11-10-2018 IPR018647 Domain of unknown function DUF2075 DB34_04055 a32772486ef1a5ce5f0b98315f38d4fb 410 Gene3D G3DSA:3.40.50.300 30 208 2.0E-9 T 11-10-2018 DB34_09455 61faaa52976fd036e433c8d375c55d59 399 Pfam PF00994 Probable molybdopterin binding domain 174 310 2.0E-21 T 11-10-2018 IPR001453 MoaB/Mog domain DB34_09455 61faaa52976fd036e433c8d375c55d59 399 Pfam PF03454 MoeA C-terminal region (domain IV) 326 396 1.7E-7 T 11-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DB34_09455 61faaa52976fd036e433c8d375c55d59 399 Pfam PF03453 MoeA N-terminal region (domain I and II) 4 161 3.3E-39 T 11-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DB34_09455 61faaa52976fd036e433c8d375c55d59 399 SUPERFAMILY SSF63882 1 170 1.44E-48 T 11-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DB34_09455 61faaa52976fd036e433c8d375c55d59 399 Gene3D G3DSA:3.40.980.10 169 321 3.4E-114 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily DB34_09455 61faaa52976fd036e433c8d375c55d59 399 SUPERFAMILY SSF63867 322 398 8.24E-11 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DB34_09455 61faaa52976fd036e433c8d375c55d59 399 SMART SM00852 174 311 7.4E-39 T 11-10-2018 IPR001453 MoaB/Mog domain DB34_09455 61faaa52976fd036e433c8d375c55d59 399 Gene3D G3DSA:3.90.105.10 20 168 3.4E-114 T 11-10-2018 DB34_09455 61faaa52976fd036e433c8d375c55d59 399 SUPERFAMILY SSF53218 171 315 7.33E-38 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily DB34_09455 61faaa52976fd036e433c8d375c55d59 399 Gene3D G3DSA:2.40.340.10 322 379 3.4E-114 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DB34_09455 61faaa52976fd036e433c8d375c55d59 399 Gene3D G3DSA:2.170.190.11 44 135 3.4E-114 T 11-10-2018 DB34_08025 7c48e79c6a65389f85f52307c69b487e 165 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 38 148 5.0E-23 T 11-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_08025 7c48e79c6a65389f85f52307c69b487e 165 SUPERFAMILY SSF56770 26 152 1.83E-43 T 11-10-2018 DB34_08025 7c48e79c6a65389f85f52307c69b487e 165 Gene3D G3DSA:3.40.50.12280 13 164 1.4E-42 T 11-10-2018 DB34_03070 f28a3e0e3584daf7f3df8a9e99f517cb 484 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 153 167 - T 11-10-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 DB34_03070 f28a3e0e3584daf7f3df8a9e99f517cb 484 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 11 483 37.057 T 11-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 DB34_03070 f28a3e0e3584daf7f3df8a9e99f517cb 484 SUPERFAMILY SSF89095 305 410 2.01E-32 T 11-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 DB34_03070 f28a3e0e3584daf7f3df8a9e99f517cb 484 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 12 482 5.0E-166 T 11-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 DB34_03070 f28a3e0e3584daf7f3df8a9e99f517cb 484 Gene3D G3DSA:1.10.150.380 305 415 5.6E-37 T 11-10-2018 DB34_03070 f28a3e0e3584daf7f3df8a9e99f517cb 484 Pfam PF02637 GatB domain 337 482 6.0E-49 T 11-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 DB34_03070 f28a3e0e3584daf7f3df8a9e99f517cb 484 SUPERFAMILY SSF55931 13 304 1.77E-115 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 DB34_03070 f28a3e0e3584daf7f3df8a9e99f517cb 484 Gene3D G3DSA:1.10.10.410 422 484 4.7E-23 T 11-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal DB34_03070 f28a3e0e3584daf7f3df8a9e99f517cb 484 Pfam PF02934 GatB/GatE catalytic domain 14 296 1.1E-113 T 11-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 DB34_03070 f28a3e0e3584daf7f3df8a9e99f517cb 484 SMART SM00845 336 482 3.2E-77 T 11-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 DB34_04585 026ed9cf1e0b27b43c99e22f53423661 64 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 7 61 2.6E-16 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 DB34_04585 026ed9cf1e0b27b43c99e22f53423661 64 Hamap MF_00422 Protein translocase subunit SecE [secE]. 4 59 11.706 T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DB34_04585 026ed9cf1e0b27b43c99e22f53423661 64 Gene3D G3DSA:1.20.5.1030 4 61 1.8E-12 T 11-10-2018 IPR038379 SecE superfamily DB34_04585 026ed9cf1e0b27b43c99e22f53423661 64 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 7 58 1.7E-14 T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DB34_12235 59593b0f63ad509d730abb70ab74564c 607 Pfam PF01380 SIS domain 461 589 4.6E-22 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DB34_12235 59593b0f63ad509d730abb70ab74564c 607 Pfam PF01380 SIS domain 287 414 3.7E-26 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DB34_12235 59593b0f63ad509d730abb70ab74564c 607 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 607 3.9E-225 T 11-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 DB34_12235 59593b0f63ad509d730abb70ab74564c 607 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 607 37.143 T 11-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 DB34_12235 59593b0f63ad509d730abb70ab74564c 607 Gene3D G3DSA:3.40.50.10490 444 592 1.9E-129 T 11-10-2018 DB34_12235 59593b0f63ad509d730abb70ab74564c 607 SUPERFAMILY SSF56235 2 233 1.37E-70 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DB34_12235 59593b0f63ad509d730abb70ab74564c 607 Gene3D G3DSA:3.60.20.10 2 239 3.3E-71 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DB34_12235 59593b0f63ad509d730abb70ab74564c 607 SUPERFAMILY SSF53697 245 607 6.06E-97 T 11-10-2018 DB34_12235 59593b0f63ad509d730abb70ab74564c 607 Pfam PF13522 Glutamine amidotransferase domain 65 191 7.6E-19 T 11-10-2018 DB34_12235 59593b0f63ad509d730abb70ab74564c 607 Gene3D G3DSA:3.40.50.10490 247 606 1.9E-129 T 11-10-2018 DB34_02990 ab1ae9389ea227de4b74f2ac035828f4 447 SUPERFAMILY SSF52440 1 113 3.81E-50 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily DB34_02990 ab1ae9389ea227de4b74f2ac035828f4 447 SMART SM00878 335 440 5.9E-71 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DB34_02990 ab1ae9389ea227de4b74f2ac035828f4 447 Pfam PF02785 Biotin carboxylase C-terminal domain 335 441 3.0E-42 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DB34_02990 ab1ae9389ea227de4b74f2ac035828f4 447 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 2.1E-46 T 11-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DB34_02990 ab1ae9389ea227de4b74f2ac035828f4 447 Gene3D G3DSA:3.30.470.130 1 445 4.9E-193 T 11-10-2018 DB34_02990 ab1ae9389ea227de4b74f2ac035828f4 447 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 285 292 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DB34_02990 ab1ae9389ea227de4b74f2ac035828f4 447 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 443 5.2E-223 T 11-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 DB34_02990 ab1ae9389ea227de4b74f2ac035828f4 447 SUPERFAMILY SSF56059 83 343 4.24E-68 T 11-10-2018 DB34_02990 ab1ae9389ea227de4b74f2ac035828f4 447 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DB34_02990 ab1ae9389ea227de4b74f2ac035828f4 447 SUPERFAMILY SSF51246 330 442 8.37E-46 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 DB34_02990 ab1ae9389ea227de4b74f2ac035828f4 447 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 321 1.5E-76 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DB34_05960 b3abff7efa1909131fc9c97f0e8acf52 335 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 9.9E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_05960 b3abff7efa1909131fc9c97f0e8acf52 335 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 9.9E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_05960 b3abff7efa1909131fc9c97f0e8acf52 335 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 9.9E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_05960 b3abff7efa1909131fc9c97f0e8acf52 335 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 9.9E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_05960 b3abff7efa1909131fc9c97f0e8acf52 335 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 9.9E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_05960 b3abff7efa1909131fc9c97f0e8acf52 335 Gene3D G3DSA:3.40.50.720 5 250 4.4E-48 T 11-10-2018 DB34_05960 b3abff7efa1909131fc9c97f0e8acf52 335 Pfam PF00106 short chain dehydrogenase 4 191 7.4E-33 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_05960 b3abff7efa1909131fc9c97f0e8acf52 335 SUPERFAMILY SSF51735 4 250 2.65E-49 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily DB34_05880 6ce0cdc05338270938c152b78c95939d 184 Pfam PF00692 dUTPase 77 179 3.6E-7 T 11-10-2018 IPR029054 dUTPase-like DB34_05880 6ce0cdc05338270938c152b78c95939d 184 SUPERFAMILY SSF51283 3 183 1.44E-50 T 11-10-2018 IPR036157 dUTPase-like superfamily DB34_05880 6ce0cdc05338270938c152b78c95939d 184 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 6 184 6.3E-49 T 11-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 DB34_05880 6ce0cdc05338270938c152b78c95939d 184 Gene3D G3DSA:2.70.40.10 1 157 1.0E-52 T 11-10-2018 IPR036157 dUTPase-like superfamily DB34_05880 6ce0cdc05338270938c152b78c95939d 184 Hamap MF_00146 dCTP deaminase [dcd]. 1 184 28.758 T 11-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 DB34_08570 32738ca8250dd8b574604558b58969a6 1057 Pfam PF00873 AcrB/AcrD/AcrF family 6 1042 1.8E-193 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DB34_08570 32738ca8250dd8b574604558b58969a6 1057 Gene3D G3DSA:3.30.2090.10 730 828 8.5E-236 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DB34_08570 32738ca8250dd8b574604558b58969a6 1057 Gene3D G3DSA:3.30.70.1320 136 325 8.5E-236 T 11-10-2018 DB34_08570 32738ca8250dd8b574604558b58969a6 1057 Gene3D G3DSA:3.30.70.1430 571 683 8.5E-236 T 11-10-2018 DB34_08570 32738ca8250dd8b574604558b58969a6 1057 SUPERFAMILY SSF82714 186 265 1.18E-12 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DB34_08570 32738ca8250dd8b574604558b58969a6 1057 Gene3D G3DSA:3.30.2090.10 181 272 8.5E-236 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DB34_08570 32738ca8250dd8b574604558b58969a6 1057 SUPERFAMILY SSF82866 291 490 2.49E-41 T 11-10-2018 DB34_08570 32738ca8250dd8b574604558b58969a6 1057 SUPERFAMILY SSF82693 41 136 2.35E-17 T 11-10-2018 DB34_08570 32738ca8250dd8b574604558b58969a6 1057 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 2.3E-36 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DB34_08570 32738ca8250dd8b574604558b58969a6 1057 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 2.3E-36 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DB34_08570 32738ca8250dd8b574604558b58969a6 1057 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 2.3E-36 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DB34_08570 32738ca8250dd8b574604558b58969a6 1057 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 2.3E-36 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DB34_08570 32738ca8250dd8b574604558b58969a6 1057 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 2.3E-36 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DB34_08570 32738ca8250dd8b574604558b58969a6 1057 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 2.3E-36 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DB34_08570 32738ca8250dd8b574604558b58969a6 1057 PRINTS PR00702 Acriflavin resistance protein family signature 358 379 2.3E-36 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DB34_08570 32738ca8250dd8b574604558b58969a6 1057 SUPERFAMILY SSF82693 137 325 5.23E-15 T 11-10-2018 DB34_08570 32738ca8250dd8b574604558b58969a6 1057 Gene3D G3DSA:3.30.70.1440 684 888 8.5E-236 T 11-10-2018 DB34_08570 32738ca8250dd8b574604558b58969a6 1057 Gene3D G3DSA:3.30.70.1430 41 836 8.5E-236 T 11-10-2018 DB34_08570 32738ca8250dd8b574604558b58969a6 1057 Gene3D G3DSA:1.20.1640.10 513 1039 8.5E-236 T 11-10-2018 DB34_08570 32738ca8250dd8b574604558b58969a6 1057 Gene3D G3DSA:1.20.1640.10 11 512 8.5E-236 T 11-10-2018 DB34_08570 32738ca8250dd8b574604558b58969a6 1057 SUPERFAMILY SSF82866 826 1046 9.02E-42 T 11-10-2018 DB34_01785 a829d7fed31d3c80d239960bff4b75f1 286 Gene3D G3DSA:3.30.1150.10 147 282 3.7E-33 T 11-10-2018 DB34_01785 a829d7fed31d3c80d239960bff4b75f1 286 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 204 281 4.5E-18 T 11-10-2018 IPR006260 TonB/TolA, C-terminal DB34_01785 a829d7fed31d3c80d239960bff4b75f1 286 SUPERFAMILY SSF74653 199 279 7.72E-15 T 11-10-2018 DB34_01785 a829d7fed31d3c80d239960bff4b75f1 286 PRINTS PR01217 Proline rich extensin signature 57 69 2.1E-9 T 11-10-2018 DB34_01785 a829d7fed31d3c80d239960bff4b75f1 286 PRINTS PR01217 Proline rich extensin signature 72 93 2.1E-9 T 11-10-2018 DB34_01785 a829d7fed31d3c80d239960bff4b75f1 286 PRINTS PR01217 Proline rich extensin signature 143 168 2.1E-9 T 11-10-2018 DB34_01785 a829d7fed31d3c80d239960bff4b75f1 286 PRINTS PR01217 Proline rich extensin signature 115 132 2.1E-9 T 11-10-2018 DB34_01785 a829d7fed31d3c80d239960bff4b75f1 286 PRINTS PR01217 Proline rich extensin signature 93 109 2.1E-9 T 11-10-2018 DB34_01785 a829d7fed31d3c80d239960bff4b75f1 286 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 203 280 1.9E-15 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 DB34_04485 20a03535e073adbf05396b94598b9cbc 110 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 13 108 3.4E-33 T 11-10-2018 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 DB34_04485 20a03535e073adbf05396b94598b9cbc 110 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 20 93 4.3E-16 T 11-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 DB34_10100 8e87579ef0c36bc2503fa609e90d3439 246 Pfam PF00121 Triosephosphate isomerase 5 240 4.7E-78 T 11-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB34_10100 8e87579ef0c36bc2503fa609e90d3439 246 Gene3D G3DSA:3.20.20.70 1 245 8.4E-89 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB34_10100 8e87579ef0c36bc2503fa609e90d3439 246 SUPERFAMILY SSF51351 1 242 4.58E-83 T 11-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB34_10100 8e87579ef0c36bc2503fa609e90d3439 246 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 3 242 52.533 T 11-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB34_10100 8e87579ef0c36bc2503fa609e90d3439 246 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 234 2.8E-52 T 11-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB34_10100 8e87579ef0c36bc2503fa609e90d3439 246 ProSitePatterns PS00171 Triosephosphate isomerase active site. 159 169 - T 11-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB34_07355 be501b86df68d28e0706348ab8802c92 268 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 27 242 1.4E-44 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 DB34_07355 be501b86df68d28e0706348ab8802c92 268 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 42 58 4.0E-23 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 DB34_07355 be501b86df68d28e0706348ab8802c92 268 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 195 214 4.0E-23 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 DB34_07355 be501b86df68d28e0706348ab8802c92 268 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 112 124 4.0E-23 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 DB34_07355 be501b86df68d28e0706348ab8802c92 268 Gene3D G3DSA:2.10.109.10 40 241 9.3E-59 T 11-10-2018 DB34_07355 be501b86df68d28e0706348ab8802c92 268 Gene3D G3DSA:2.170.230.10 123 194 9.3E-59 T 11-10-2018 DB34_07355 be501b86df68d28e0706348ab8802c92 268 ProSitePatterns PS00501 Signal peptidases I serine active site. 51 58 - T 11-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 DB34_07355 be501b86df68d28e0706348ab8802c92 268 Pfam PF00717 Peptidase S24-like 49 135 1.0E-18 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C DB34_07355 be501b86df68d28e0706348ab8802c92 268 ProSitePatterns PS00760 Signal peptidases I lysine active site. 114 126 - T 11-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 DB34_07355 be501b86df68d28e0706348ab8802c92 268 SUPERFAMILY SSF51306 40 265 8.11E-59 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily DB34_08345 f4d5c054ffa0a2ddc19fd587effacce1 440 Gene3D G3DSA:1.10.940.10 22 160 3.5E-29 T 11-10-2018 IPR035926 NusB-like superfamily DB34_08345 f4d5c054ffa0a2ddc19fd587effacce1 440 SUPERFAMILY SSF48013 26 165 1.5E-24 T 11-10-2018 IPR035926 NusB-like superfamily DB34_08345 f4d5c054ffa0a2ddc19fd587effacce1 440 Gene3D G3DSA:3.40.50.150 176 439 1.6E-59 T 11-10-2018 DB34_08345 f4d5c054ffa0a2ddc19fd587effacce1 440 Pfam PF01189 16S rRNA methyltransferase RsmB/F 244 437 2.1E-40 T 11-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 DB34_08345 f4d5c054ffa0a2ddc19fd587effacce1 440 Pfam PF01029 NusB family 25 144 2.9E-18 T 11-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 DB34_08345 f4d5c054ffa0a2ddc19fd587effacce1 440 SUPERFAMILY SSF53335 210 439 1.28E-56 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB34_08345 f4d5c054ffa0a2ddc19fd587effacce1 440 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 316 328 1.1E-23 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase DB34_08345 f4d5c054ffa0a2ddc19fd587effacce1 440 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 225 239 1.1E-23 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase DB34_08345 f4d5c054ffa0a2ddc19fd587effacce1 440 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 422 439 1.1E-23 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase DB34_08345 f4d5c054ffa0a2ddc19fd587effacce1 440 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 254 264 1.1E-23 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase DB34_08345 f4d5c054ffa0a2ddc19fd587effacce1 440 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 366 382 1.1E-23 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase DB34_12970 6b8b3be4623d1564863db96510e3e503 461 Gene3D G3DSA:3.40.50.2000 262 444 7.2E-28 T 11-10-2018 DB34_12970 6b8b3be4623d1564863db96510e3e503 461 Gene3D G3DSA:3.40.50.2000 181 456 7.2E-28 T 11-10-2018 DB34_12970 6b8b3be4623d1564863db96510e3e503 461 Pfam PF00534 Glycosyl transferases group 1 279 441 1.7E-15 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 DB34_12970 6b8b3be4623d1564863db96510e3e503 461 SUPERFAMILY SSF53756 180 457 1.1E-37 T 11-10-2018 DB34_08715 9464a595caeb01f64631f88cf93a0c84 120 SUPERFAMILY SSF53137 6 118 6.11E-49 T 11-10-2018 DB34_08715 9464a595caeb01f64631f88cf93a0c84 120 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 3 120 8.6E-43 T 11-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_08715 9464a595caeb01f64631f88cf93a0c84 120 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 3 120 28.495 T 11-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_08715 9464a595caeb01f64631f88cf93a0c84 120 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 5 120 1.8E-40 T 11-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_08715 9464a595caeb01f64631f88cf93a0c84 120 Gene3D G3DSA:3.30.420.100 2 120 1.2E-43 T 11-10-2018 DB34_08885 5bf1ba47e74787f039247b291b13e8ec 363 SUPERFAMILY SSF88713 114 329 4.82E-35 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 DB34_08885 5bf1ba47e74787f039247b291b13e8ec 363 Pfam PF04748 Divergent polysaccharide deacetylase 119 329 1.1E-53 T 11-10-2018 IPR006837 Divergent polysaccharide deacetylase DB34_08885 5bf1ba47e74787f039247b291b13e8ec 363 Gene3D G3DSA:3.20.20.370 97 335 7.6E-57 T 11-10-2018 DB34_03545 2afbd6f3273679bebd138a61f20f6edd 445 SUPERFAMILY SSF53244 302 437 9.84E-21 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DB34_03545 2afbd6f3273679bebd138a61f20f6edd 445 Gene3D G3DSA:3.40.1190.10 6 303 1.0E-89 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DB34_03545 2afbd6f3273679bebd138a61f20f6edd 445 PIRSF PIRSF001563 13 440 1.1E-103 T 11-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 DB34_03545 2afbd6f3273679bebd138a61f20f6edd 445 Gene3D G3DSA:3.90.190.20 305 440 1.0E-19 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DB34_03545 2afbd6f3273679bebd138a61f20f6edd 445 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 149 164 - T 11-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 DB34_03545 2afbd6f3273679bebd138a61f20f6edd 445 TIGRFAM TIGR01499 folC: bifunctional protein FolC 36 437 3.4E-106 T 11-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 DB34_03545 2afbd6f3273679bebd138a61f20f6edd 445 Pfam PF08245 Mur ligase middle domain 59 279 5.0E-9 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 DB34_03545 2afbd6f3273679bebd138a61f20f6edd 445 SUPERFAMILY SSF53623 20 302 4.94E-84 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DB34_04425 119f4b698a8834d050b21e52365193a3 177 SUPERFAMILY SSF53271 4 172 3.02E-49 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like DB34_04425 119f4b698a8834d050b21e52365193a3 177 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 9 175 33.848 T 11-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 DB34_04425 119f4b698a8834d050b21e52365193a3 177 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 9 174 3.3E-58 T 11-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 DB34_04425 119f4b698a8834d050b21e52365193a3 177 Gene3D G3DSA:3.40.50.2020 2 177 1.0E-59 T 11-10-2018 DB34_04425 119f4b698a8834d050b21e52365193a3 177 Pfam PF00156 Phosphoribosyl transferase domain 46 169 6.7E-18 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 DB34_10275 c7d02f5e3ade11ef9675b40c52d51f4f 564 Gene3D G3DSA:1.20.1560.10 7 331 1.2E-22 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DB34_10275 c7d02f5e3ade11ef9675b40c52d51f4f 564 SUPERFAMILY SSF90123 22 327 1.96E-30 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DB34_10275 c7d02f5e3ade11ef9675b40c52d51f4f 564 Pfam PF00005 ABC transporter 364 511 1.8E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB34_10275 c7d02f5e3ade11ef9675b40c52d51f4f 564 SMART SM00382 372 564 8.7E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_10275 c7d02f5e3ade11ef9675b40c52d51f4f 564 Pfam PF00664 ABC transporter transmembrane region 75 275 4.4E-8 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DB34_10275 c7d02f5e3ade11ef9675b40c52d51f4f 564 SUPERFAMILY SSF52540 340 558 8.66E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_10275 c7d02f5e3ade11ef9675b40c52d51f4f 564 Gene3D G3DSA:3.40.50.300 338 562 1.2E-70 T 11-10-2018 DB34_10275 c7d02f5e3ade11ef9675b40c52d51f4f 564 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 20 542 8.9E-128 T 11-10-2018 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0016021|GO:0034775|GO:0042626|GO:0045454 DB34_08735 bcc3c04669288d833bcc74bee6b29d04 452 SUPERFAMILY SSF103491 15 429 2.48E-129 T 11-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DB34_08735 bcc3c04669288d833bcc74bee6b29d04 452 ProSitePatterns PS00756 Protein secY signature 2. 178 195 - T 11-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DB34_08735 bcc3c04669288d833bcc74bee6b29d04 452 PIRSF PIRSF004557 2 445 9.0E-122 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DB34_08735 bcc3c04669288d833bcc74bee6b29d04 452 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 24 434 1.6E-124 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DB34_08735 bcc3c04669288d833bcc74bee6b29d04 452 Hamap MF_01465 Protein translocase subunit SecY [secY]. 14 438 29.21 T 11-10-2018 IPR026593 Protein translocase subunit SecY DB34_08735 bcc3c04669288d833bcc74bee6b29d04 452 Gene3D G3DSA:1.10.3370.10 13 434 4.2E-159 T 11-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DB34_08735 bcc3c04669288d833bcc74bee6b29d04 452 PRINTS PR00303 Preprotein translocase SecY subunit signature 79 99 1.3E-96 T 11-10-2018 DB34_08735 bcc3c04669288d833bcc74bee6b29d04 452 PRINTS PR00303 Preprotein translocase SecY subunit signature 185 208 1.3E-96 T 11-10-2018 DB34_08735 bcc3c04669288d833bcc74bee6b29d04 452 PRINTS PR00303 Preprotein translocase SecY subunit signature 375 393 1.3E-96 T 11-10-2018 DB34_08735 bcc3c04669288d833bcc74bee6b29d04 452 PRINTS PR00303 Preprotein translocase SecY subunit signature 277 296 1.3E-96 T 11-10-2018 DB34_08735 bcc3c04669288d833bcc74bee6b29d04 452 PRINTS PR00303 Preprotein translocase SecY subunit signature 159 184 1.3E-96 T 11-10-2018 DB34_08735 bcc3c04669288d833bcc74bee6b29d04 452 PRINTS PR00303 Preprotein translocase SecY subunit signature 320 342 1.3E-96 T 11-10-2018 DB34_08735 bcc3c04669288d833bcc74bee6b29d04 452 PRINTS PR00303 Preprotein translocase SecY subunit signature 120 143 1.3E-96 T 11-10-2018 DB34_08735 bcc3c04669288d833bcc74bee6b29d04 452 PRINTS PR00303 Preprotein translocase SecY subunit signature 407 425 1.3E-96 T 11-10-2018 DB34_08735 bcc3c04669288d833bcc74bee6b29d04 452 PRINTS PR00303 Preprotein translocase SecY subunit signature 27 45 1.3E-96 T 11-10-2018 DB34_08735 bcc3c04669288d833bcc74bee6b29d04 452 ProSitePatterns PS00755 Protein secY signature 1. 80 99 - T 11-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DB34_08735 bcc3c04669288d833bcc74bee6b29d04 452 Pfam PF00344 SecY translocase 80 422 2.3E-115 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DB34_07720 500e83c6a08941f6e733c2b864bcf3a9 478 SUPERFAMILY SSF55103 227 476 3.6E-58 T 11-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 DB34_07720 500e83c6a08941f6e733c2b864bcf3a9 478 Pfam PF02913 FAD linked oxidases, C-terminal domain 224 474 2.9E-54 T 11-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 DB34_07720 500e83c6a08941f6e733c2b864bcf3a9 478 Gene3D G3DSA:3.30.465.10 102 223 7.7E-42 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 DB34_07720 500e83c6a08941f6e733c2b864bcf3a9 478 Pfam PF01565 FAD binding domain 47 186 1.7E-36 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 DB34_07720 500e83c6a08941f6e733c2b864bcf3a9 478 Gene3D G3DSA:3.30.70.2740 348 434 3.6E-29 T 11-10-2018 DB34_07720 500e83c6a08941f6e733c2b864bcf3a9 478 Gene3D G3DSA:3.30.43.10 1 100 1.2E-23 T 11-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 DB34_07720 500e83c6a08941f6e733c2b864bcf3a9 478 Gene3D G3DSA:3.30.70.2190 224 347 9.8E-33 T 11-10-2018 DB34_07720 500e83c6a08941f6e733c2b864bcf3a9 478 Gene3D G3DSA:1.10.45.10 435 475 1.1E-12 T 11-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 DB34_07720 500e83c6a08941f6e733c2b864bcf3a9 478 SUPERFAMILY SSF56176 9 224 2.65E-69 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 DB34_02790 9d697a547ee0ac86169434efd3c2071d 327 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 106 318 7.8E-12 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB34_02790 9d697a547ee0ac86169434efd3c2071d 327 Gene3D G3DSA:1.10.3720.10 80 324 5.3E-26 T 11-10-2018 IPR035906 MetI-like superfamily DB34_02790 9d697a547ee0ac86169434efd3c2071d 327 SUPERFAMILY SSF161098 43 313 2.09E-26 T 11-10-2018 IPR035906 MetI-like superfamily DB34_02790 9d697a547ee0ac86169434efd3c2071d 327 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 26 320 3.0E-79 T 11-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 DB34_10890 fae1e5ee4c0b5a5ab354a0b7d2488cca 418 Pfam PF00375 Sodium:dicarboxylate symporter family 15 405 1.4E-106 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 DB34_10890 fae1e5ee4c0b5a5ab354a0b7d2488cca 418 SUPERFAMILY SSF118215 15 406 1.57E-109 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 DB34_10890 fae1e5ee4c0b5a5ab354a0b7d2488cca 418 PRINTS PR00173 Glutamate-aspartate symporter signature 332 351 5.4E-37 T 11-10-2018 DB34_10890 fae1e5ee4c0b5a5ab354a0b7d2488cca 418 PRINTS PR00173 Glutamate-aspartate symporter signature 11 31 5.4E-37 T 11-10-2018 DB34_10890 fae1e5ee4c0b5a5ab354a0b7d2488cca 418 PRINTS PR00173 Glutamate-aspartate symporter signature 359 379 5.4E-37 T 11-10-2018 DB34_10890 fae1e5ee4c0b5a5ab354a0b7d2488cca 418 PRINTS PR00173 Glutamate-aspartate symporter signature 297 323 5.4E-37 T 11-10-2018 DB34_10890 fae1e5ee4c0b5a5ab354a0b7d2488cca 418 PRINTS PR00173 Glutamate-aspartate symporter signature 197 216 5.4E-37 T 11-10-2018 DB34_10890 fae1e5ee4c0b5a5ab354a0b7d2488cca 418 PRINTS PR00173 Glutamate-aspartate symporter signature 56 76 5.4E-37 T 11-10-2018 DB34_10890 fae1e5ee4c0b5a5ab354a0b7d2488cca 418 PRINTS PR00173 Glutamate-aspartate symporter signature 86 111 5.4E-37 T 11-10-2018 DB34_10890 fae1e5ee4c0b5a5ab354a0b7d2488cca 418 Gene3D G3DSA:1.10.3860.10 5 416 2.8E-116 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 DB34_03360 f645230de36feda6b42405bd25f05432 151 Pfam PF14437 MafB19-like deaminase 1 149 9.7E-25 T 11-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 DB34_03360 f645230de36feda6b42405bd25f05432 151 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 53 90 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 DB34_03360 f645230de36feda6b42405bd25f05432 151 SUPERFAMILY SSF53927 5 149 6.36E-47 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 DB34_03360 f645230de36feda6b42405bd25f05432 151 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 7 149 41.388 T 11-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 DB34_03360 f645230de36feda6b42405bd25f05432 151 Gene3D G3DSA:3.40.140.10 1 151 5.0E-50 T 11-10-2018 DB34_05735 1faba500714455b327a6ed754ed8da83 388 Gene3D G3DSA:1.10.230.10 230 328 2.8E-125 T 11-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain DB34_05735 1faba500714455b327a6ed754ed8da83 388 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 14 381 4.0E-152 T 11-10-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 DB34_05735 1faba500714455b327a6ed754ed8da83 388 SUPERFAMILY SSF48256 15 375 1.31E-119 T 11-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 DB34_05735 1faba500714455b327a6ed754ed8da83 388 ProSitePatterns PS00480 Citrate synthase signature. 264 276 - T 11-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 DB34_05735 1faba500714455b327a6ed754ed8da83 388 Pfam PF00285 Citrate synthase, C-terminal domain 15 363 2.6E-113 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 DB34_05735 1faba500714455b327a6ed754ed8da83 388 PIRSF PIRSF001369 8 382 1.5E-109 T 11-10-2018 IPR024176 Citrate synthase, bacterial-type DB34_05735 1faba500714455b327a6ed754ed8da83 388 PRINTS PR00143 Citrate synthase signature 334 348 2.3E-37 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 DB34_05735 1faba500714455b327a6ed754ed8da83 388 PRINTS PR00143 Citrate synthase signature 204 232 2.3E-37 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 DB34_05735 1faba500714455b327a6ed754ed8da83 388 PRINTS PR00143 Citrate synthase signature 182 197 2.3E-37 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 DB34_05735 1faba500714455b327a6ed754ed8da83 388 PRINTS PR00143 Citrate synthase signature 314 330 2.3E-37 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 DB34_05735 1faba500714455b327a6ed754ed8da83 388 PRINTS PR00143 Citrate synthase signature 132 145 2.3E-37 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 DB34_05735 1faba500714455b327a6ed754ed8da83 388 PRINTS PR00143 Citrate synthase signature 257 277 2.3E-37 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 DB34_05735 1faba500714455b327a6ed754ed8da83 388 Gene3D G3DSA:1.10.580.10 35 361 2.8E-125 T 11-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 DB34_07300 81810f4d064241a14491225fdb848f16 601 TIGRFAM TIGR01393 lepA: elongation factor 4 9 600 1.9E-291 T 11-10-2018 IPR006297 Elongation factor 4 GO:0005525 DB34_07300 81810f4d064241a14491225fdb848f16 601 SUPERFAMILY SSF52540 5 235 1.33E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_07300 81810f4d064241a14491225fdb848f16 601 SMART SM00838 403 488 0.001 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like DB34_07300 81810f4d064241a14491225fdb848f16 601 Pfam PF03144 Elongation factor Tu domain 2 210 280 5.1E-9 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 DB34_07300 81810f4d064241a14491225fdb848f16 601 Hamap MF_00071 Elongation factor 4 [lepA]. 1 601 300.122 T 11-10-2018 IPR006297 Elongation factor 4 GO:0005525 DB34_07300 81810f4d064241a14491225fdb848f16 601 Gene3D G3DSA:3.40.50.300 6 190 1.1E-70 T 11-10-2018 DB34_07300 81810f4d064241a14491225fdb848f16 601 Pfam PF00679 Elongation factor G C-terminus 404 487 2.1E-21 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like DB34_07300 81810f4d064241a14491225fdb848f16 601 Gene3D G3DSA:2.40.30.10 191 290 8.3E-32 T 11-10-2018 DB34_07300 81810f4d064241a14491225fdb848f16 601 PRINTS PR00315 GTP-binding elongation factor signature 79 89 3.1E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB34_07300 81810f4d064241a14491225fdb848f16 601 PRINTS PR00315 GTP-binding elongation factor signature 131 140 3.1E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB34_07300 81810f4d064241a14491225fdb848f16 601 PRINTS PR00315 GTP-binding elongation factor signature 54 62 3.1E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB34_07300 81810f4d064241a14491225fdb848f16 601 PRINTS PR00315 GTP-binding elongation factor signature 11 24 3.1E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB34_07300 81810f4d064241a14491225fdb848f16 601 PRINTS PR00315 GTP-binding elongation factor signature 95 106 3.1E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB34_07300 81810f4d064241a14491225fdb848f16 601 Gene3D G3DSA:3.30.70.870 291 372 9.0E-34 T 11-10-2018 DB34_07300 81810f4d064241a14491225fdb848f16 601 Pfam PF06421 GTP-binding protein LepA C-terminus 492 598 1.4E-49 T 11-10-2018 IPR013842 GTP-binding protein LepA, C-terminal DB34_07300 81810f4d064241a14491225fdb848f16 601 SUPERFAMILY SSF54980 298 375 8.27E-17 T 11-10-2018 IPR035647 EF-G domain III/V-like DB34_07300 81810f4d064241a14491225fdb848f16 601 Gene3D G3DSA:3.30.70.2570 484 558 4.0E-33 T 11-10-2018 IPR038363 LepA, C-terminal domain superfamily DB34_07300 81810f4d064241a14491225fdb848f16 601 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 47 62 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site DB34_07300 81810f4d064241a14491225fdb848f16 601 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 12 180 7.4E-21 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DB34_07300 81810f4d064241a14491225fdb848f16 601 Gene3D G3DSA:3.30.70.3380 373 483 3.2E-41 T 11-10-2018 DB34_07300 81810f4d064241a14491225fdb848f16 601 SUPERFAMILY SSF54980 404 498 4.32E-26 T 11-10-2018 IPR035647 EF-G domain III/V-like DB34_07300 81810f4d064241a14491225fdb848f16 601 Pfam PF00009 Elongation factor Tu GTP binding domain 9 186 5.0E-51 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB34_10480 74d3c4a81636066d36f9d6d202d9dab5 91 Gene3D G3DSA:3.40.30.10 1 91 1.6E-42 T 11-10-2018 DB34_10480 74d3c4a81636066d36f9d6d202d9dab5 91 TIGRFAM TIGR02174 CXXU_selWTH: selT/selW/selH selenoprotein domain 6 78 1.8E-24 T 11-10-2018 IPR011893 Selenoprotein, Rdx-type DB34_10480 74d3c4a81636066d36f9d6d202d9dab5 91 SUPERFAMILY SSF52833 3 87 1.16E-30 T 11-10-2018 IPR036249 Thioredoxin-like superfamily DB34_10480 74d3c4a81636066d36f9d6d202d9dab5 91 Pfam PF10262 Rdx family 5 78 1.7E-34 T 11-10-2018 IPR011893 Selenoprotein, Rdx-type DB34_07450 9fea00be4b0b4910e983b69af35d7828 583 Pfam PF02096 60Kd inner membrane protein 366 566 9.9E-46 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 DB34_07450 9fea00be4b0b4910e983b69af35d7828 583 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 365 567 2.2E-55 T 11-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_07450 9fea00be4b0b4910e983b69af35d7828 583 Gene3D G3DSA:2.70.98.90 68 341 9.8E-31 T 11-10-2018 IPR038221 YidC, periplasmic domain superfamily DB34_07450 9fea00be4b0b4910e983b69af35d7828 583 PRINTS PR00701 60kDa inner membrane protein signature 256 271 3.6E-11 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 DB34_07450 9fea00be4b0b4910e983b69af35d7828 583 PRINTS PR00701 60kDa inner membrane protein signature 427 450 3.6E-11 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 DB34_07450 9fea00be4b0b4910e983b69af35d7828 583 PRINTS PR00701 60kDa inner membrane protein signature 336 356 3.6E-11 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 DB34_07450 9fea00be4b0b4910e983b69af35d7828 583 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 570 18.43 T 11-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 DB34_07450 9fea00be4b0b4910e983b69af35d7828 583 PRINTS PR01900 YidC translocation/secretion protein signature 351 367 1.5E-16 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 DB34_07450 9fea00be4b0b4910e983b69af35d7828 583 PRINTS PR01900 YidC translocation/secretion protein signature 502 517 1.5E-16 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 DB34_07450 9fea00be4b0b4910e983b69af35d7828 583 PRINTS PR01900 YidC translocation/secretion protein signature 523 547 1.5E-16 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 DB34_07450 9fea00be4b0b4910e983b69af35d7828 583 Pfam PF14849 YidC periplasmic domain 72 354 5.2E-72 T 11-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain DB34_07450 9fea00be4b0b4910e983b69af35d7828 583 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 364 1.8E-78 T 11-10-2018 IPR028053 Membrane insertase YidC, N-terminal DB34_01895 d6a6c37e9c017a118a3f57ccb43aaec9 350 TIGRFAM TIGR02475 CobW: cobalamin biosynthesis protein CobW 5 343 4.7E-159 T 11-10-2018 IPR012824 Cobalamin (vitamin B12) biosynthesis CobW GO:0009236 DB34_01895 d6a6c37e9c017a118a3f57ccb43aaec9 350 SUPERFAMILY SSF52540 6 211 5.25E-33 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_01895 d6a6c37e9c017a118a3f57ccb43aaec9 350 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 8 206 2.4E-57 T 11-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain DB34_01895 d6a6c37e9c017a118a3f57ccb43aaec9 350 Gene3D G3DSA:3.30.1220.10 231 346 3.0E-16 T 11-10-2018 IPR036627 CobW-like, C-terminal domain superfamily DB34_01895 d6a6c37e9c017a118a3f57ccb43aaec9 350 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 254 345 5.7E-15 T 11-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal DB34_01895 d6a6c37e9c017a118a3f57ccb43aaec9 350 Gene3D G3DSA:3.40.50.300 4 229 3.9E-61 T 11-10-2018 DB34_01895 d6a6c37e9c017a118a3f57ccb43aaec9 350 SUPERFAMILY SSF90002 254 346 1.31E-16 T 11-10-2018 DB34_01895 d6a6c37e9c017a118a3f57ccb43aaec9 350 SMART SM00833 254 347 6.4E-8 T 11-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal DB34_05305 046a009d8a6b423a90e1c3686ace1f11 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 233 4.0E-21 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DB34_05305 046a009d8a6b423a90e1c3686ace1f11 237 SUPERFAMILY SSF52172 5 128 4.55E-39 T 11-10-2018 IPR011006 CheY-like superfamily DB34_05305 046a009d8a6b423a90e1c3686ace1f11 237 Pfam PF00072 Response regulator receiver domain 9 118 9.1E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB34_05305 046a009d8a6b423a90e1c3686ace1f11 237 Gene3D G3DSA:3.40.50.2300 1 133 1.9E-37 T 11-10-2018 DB34_05305 046a009d8a6b423a90e1c3686ace1f11 237 SUPERFAMILY SSF46894 140 235 1.22E-24 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DB34_05305 046a009d8a6b423a90e1c3686ace1f11 237 SMART SM00448 7 117 5.6E-40 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB34_05305 046a009d8a6b423a90e1c3686ace1f11 237 Gene3D G3DSA:1.10.10.10 144 237 6.1E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB34_05305 046a009d8a6b423a90e1c3686ace1f11 237 SMART SM00862 158 234 4.4E-19 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DB34_03790 e02f9a382ac0b94b57b4d8dad1b494d7 258 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 250 47.394 T 11-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 DB34_03790 e02f9a382ac0b94b57b4d8dad1b494d7 258 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 250 6.6E-104 T 11-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 DB34_03790 e02f9a382ac0b94b57b4d8dad1b494d7 258 SUPERFAMILY SSF51366 1 250 7.85E-81 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 DB34_03790 e02f9a382ac0b94b57b4d8dad1b494d7 258 Pfam PF00977 Histidine biosynthesis protein 5 234 1.4E-86 T 11-10-2018 IPR006062 Histidine biosynthesis GO:0000105 DB34_03790 e02f9a382ac0b94b57b4d8dad1b494d7 258 Gene3D G3DSA:3.20.20.70 1 254 1.0E-104 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB34_04835 b7d2664c6527fb88f4279f6edbecaa23 508 Pfam PF02321 Outer membrane efflux protein 75 250 2.5E-23 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DB34_04835 b7d2664c6527fb88f4279f6edbecaa23 508 Pfam PF02321 Outer membrane efflux protein 295 479 1.6E-19 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DB34_04835 b7d2664c6527fb88f4279f6edbecaa23 508 SUPERFAMILY SSF56954 4 482 8.37E-93 T 11-10-2018 DB34_04835 b7d2664c6527fb88f4279f6edbecaa23 508 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 16 481 3.2E-96 T 11-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 DB34_04835 b7d2664c6527fb88f4279f6edbecaa23 508 Gene3D G3DSA:1.20.1600.10 64 482 1.9E-114 T 11-10-2018 DB34_04835 b7d2664c6527fb88f4279f6edbecaa23 508 Gene3D G3DSA:2.20.200.10 111 370 1.9E-114 T 11-10-2018 DB34_11135 bf4025d5cc2aa5005e45ea029d9250a0 311 Pfam PF09163 Formate dehydrogenase N, transmembrane 247 288 1.8E-19 T 11-10-2018 IPR015246 Formate dehydrogenase, transmembrane DB34_11135 bf4025d5cc2aa5005e45ea029d9250a0 311 Gene3D G3DSA:1.20.5.480 249 294 8.5E-10 T 11-10-2018 IPR038384 Formate dehydrogenase, C-terminal domain superfamily DB34_11135 bf4025d5cc2aa5005e45ea029d9250a0 311 TIGRFAM TIGR01582 FDH-beta: formate dehydrogenase, beta subunit 7 287 1.1E-135 T 11-10-2018 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria GO:0015944|GO:0016021|GO:0045333|GO:0051539 DB34_11135 bf4025d5cc2aa5005e45ea029d9250a0 311 PIRSF PIRSF036298 1 305 3.7E-152 T 11-10-2018 IPR014603 Formate dehydrogenase iron-sulphur subunit GO:0015944|GO:0045333|GO:0051539 DB34_11135 bf4025d5cc2aa5005e45ea029d9250a0 311 Gene3D G3DSA:3.30.70.20 18 163 4.0E-96 T 11-10-2018 DB34_11135 bf4025d5cc2aa5005e45ea029d9250a0 311 Pfam PF13247 4Fe-4S dicluster domain 93 189 3.4E-25 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DB34_11135 bf4025d5cc2aa5005e45ea029d9250a0 311 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 134 145 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DB34_11135 bf4025d5cc2aa5005e45ea029d9250a0 311 Gene3D G3DSA:3.30.70.20 28 228 4.0E-96 T 11-10-2018 DB34_11135 bf4025d5cc2aa5005e45ea029d9250a0 311 SUPERFAMILY SSF54862 28 289 2.72E-68 T 11-10-2018 DB34_10180 3a8ce0677ffb2ba2f31567d23a74acd1 897 Hamap MF_02004 Valine--tRNA ligase [valS]. 2 897 15.736 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 DB34_10180 3a8ce0677ffb2ba2f31567d23a74acd1 897 Pfam PF08264 Anticodon-binding domain of tRNA 627 774 7.4E-35 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 DB34_10180 3a8ce0677ffb2ba2f31567d23a74acd1 897 SUPERFAMILY SSF52374 4 592 1.44E-138 T 11-10-2018 DB34_10180 3a8ce0677ffb2ba2f31567d23a74acd1 897 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 832 896 3.3E-16 T 11-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 DB34_10180 3a8ce0677ffb2ba2f31567d23a74acd1 897 SUPERFAMILY SSF50677 191 359 5.62E-58 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 DB34_10180 3a8ce0677ffb2ba2f31567d23a74acd1 897 Gene3D G3DSA:3.40.50.620 22 545 2.9E-298 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DB34_10180 3a8ce0677ffb2ba2f31567d23a74acd1 897 SUPERFAMILY SSF47323 596 846 2.62E-50 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB34_10180 3a8ce0677ffb2ba2f31567d23a74acd1 897 Gene3D G3DSA:1.10.287.380 825 897 4.1E-19 T 11-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 DB34_10180 3a8ce0677ffb2ba2f31567d23a74acd1 897 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 15 583 1.2E-209 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB34_10180 3a8ce0677ffb2ba2f31567d23a74acd1 897 TIGRFAM TIGR00422 valS: valine--tRNA ligase 3 877 0.0 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 DB34_10180 3a8ce0677ffb2ba2f31567d23a74acd1 897 SUPERFAMILY SSF46589 832 896 7.32E-15 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 DB34_10180 3a8ce0677ffb2ba2f31567d23a74acd1 897 Gene3D G3DSA:3.90.740.10 175 359 2.9E-298 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 DB34_10180 3a8ce0677ffb2ba2f31567d23a74acd1 897 PRINTS PR00986 Valyl-tRNA synthetase signature 496 514 8.3E-39 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 DB34_10180 3a8ce0677ffb2ba2f31567d23a74acd1 897 PRINTS PR00986 Valyl-tRNA synthetase signature 36 47 8.3E-39 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 DB34_10180 3a8ce0677ffb2ba2f31567d23a74acd1 897 PRINTS PR00986 Valyl-tRNA synthetase signature 231 248 8.3E-39 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 DB34_10180 3a8ce0677ffb2ba2f31567d23a74acd1 897 PRINTS PR00986 Valyl-tRNA synthetase signature 363 376 8.3E-39 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 DB34_10180 3a8ce0677ffb2ba2f31567d23a74acd1 897 PRINTS PR00986 Valyl-tRNA synthetase signature 465 486 8.3E-39 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 DB34_10180 3a8ce0677ffb2ba2f31567d23a74acd1 897 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 43 54 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB34_10180 3a8ce0677ffb2ba2f31567d23a74acd1 897 Gene3D G3DSA:1.10.730.10 2 761 2.9E-298 T 11-10-2018 DB34_04190 91b0a403108c60a3ed47ee7e799dba43 407 Gene3D G3DSA:3.40.50.1260 172 389 1.6E-151 T 11-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB34_04190 91b0a403108c60a3ed47ee7e799dba43 407 Gene3D G3DSA:3.40.50.1260 12 396 1.6E-151 T 11-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB34_04190 91b0a403108c60a3ed47ee7e799dba43 407 SUPERFAMILY SSF53748 6 398 1.53E-148 T 11-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB34_04190 91b0a403108c60a3ed47ee7e799dba43 407 Pfam PF00162 Phosphoglycerate kinase 11 389 1.1E-149 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB34_04190 91b0a403108c60a3ed47ee7e799dba43 407 PIRSF PIRSF000724 1 405 8.6E-143 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB34_04190 91b0a403108c60a3ed47ee7e799dba43 407 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 399 39.636 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB34_04190 91b0a403108c60a3ed47ee7e799dba43 407 PRINTS PR00477 Phosphoglycerate kinase family signature 315 340 2.9E-83 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB34_04190 91b0a403108c60a3ed47ee7e799dba43 407 PRINTS PR00477 Phosphoglycerate kinase family signature 112 127 2.9E-83 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB34_04190 91b0a403108c60a3ed47ee7e799dba43 407 PRINTS PR00477 Phosphoglycerate kinase family signature 140 162 2.9E-83 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB34_04190 91b0a403108c60a3ed47ee7e799dba43 407 PRINTS PR00477 Phosphoglycerate kinase family signature 170 192 2.9E-83 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB34_04190 91b0a403108c60a3ed47ee7e799dba43 407 PRINTS PR00477 Phosphoglycerate kinase family signature 13 29 2.9E-83 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB34_04190 91b0a403108c60a3ed47ee7e799dba43 407 PRINTS PR00477 Phosphoglycerate kinase family signature 34 56 2.9E-83 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB34_04190 91b0a403108c60a3ed47ee7e799dba43 407 PRINTS PR00477 Phosphoglycerate kinase family signature 375 392 2.9E-83 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB34_04190 91b0a403108c60a3ed47ee7e799dba43 407 PRINTS PR00477 Phosphoglycerate kinase family signature 193 212 2.9E-83 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB34_04190 91b0a403108c60a3ed47ee7e799dba43 407 PRINTS PR00477 Phosphoglycerate kinase family signature 352 363 2.9E-83 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB34_13180 902fd441c2dd9ec1e163fdd94424ca4b 67 Pfam PF10948 Protein of unknown function (DUF2635) 3 47 6.3E-14 T 11-10-2018 IPR024400 Protein of unknown function DUF2635 DB34_13180 902fd441c2dd9ec1e163fdd94424ca4b 67 ProDom PD027295 GP38 FLUMU BACTERIOPHAGE MU-LIKE ECS4978 SB12 PHAGE ORF10 PROPHAGE 2 42 2.0E-5 T 11-10-2018 IPR024400 Protein of unknown function DUF2635 DB34_05430 22ff1fda446741e3daf97bd4a77e5caa 417 Gene3D G3DSA:1.10.8.260 276 330 7.7E-68 T 11-10-2018 IPR023166 HI0933-like insert domain superfamily DB34_05430 22ff1fda446741e3daf97bd4a77e5caa 417 SUPERFAMILY SSF160996 201 345 5.1E-13 T 11-10-2018 DB34_05430 22ff1fda446741e3daf97bd4a77e5caa 417 Pfam PF03486 HI0933-like protein 8 399 4.2E-101 T 11-10-2018 DB34_05430 22ff1fda446741e3daf97bd4a77e5caa 417 Gene3D G3DSA:3.50.50.60 9 397 7.7E-68 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_05430 22ff1fda446741e3daf97bd4a77e5caa 417 SUPERFAMILY SSF51905 8 403 1.41E-43 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_05430 22ff1fda446741e3daf97bd4a77e5caa 417 TIGRFAM TIGR03862 flavo_PP4765: flavoprotein, TIGR03862 family 29 406 7.7E-152 T 11-10-2018 IPR022460 Conserved hyptotheical protein CHP03862, flavoprotein, PP4765 DB34_05430 22ff1fda446741e3daf97bd4a77e5caa 417 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 5.0E-7 T 11-10-2018 DB34_05430 22ff1fda446741e3daf97bd4a77e5caa 417 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 354 376 5.0E-7 T 11-10-2018 DB34_05430 22ff1fda446741e3daf97bd4a77e5caa 417 Gene3D G3DSA:2.40.30.10 197 347 7.7E-68 T 11-10-2018 DB34_05430 22ff1fda446741e3daf97bd4a77e5caa 417 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 4.5E-5 T 11-10-2018 DB34_05430 22ff1fda446741e3daf97bd4a77e5caa 417 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 369 376 4.5E-5 T 11-10-2018 DB34_05430 22ff1fda446741e3daf97bd4a77e5caa 417 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 9 399 9.2E-85 T 11-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like DB34_09990 706d4a019875180f1aa75e44d6bcf7db 233 Gene3D G3DSA:3.40.50.880 1 232 4.0E-65 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like DB34_09990 706d4a019875180f1aa75e44d6bcf7db 233 TIGRFAM TIGR01737 FGAM_synth_I: phosphoribosylformylglycinamidine synthase I 1 230 1.5E-90 T 11-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 DB34_09990 706d4a019875180f1aa75e44d6bcf7db 233 Hamap MF_00421 Phosphoribosylformylglycinamidine synthase subunit PurQ [purQ]. 1 229 42.595 T 11-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 DB34_09990 706d4a019875180f1aa75e44d6bcf7db 233 PIRSF PIRSF001586 1 233 1.8E-83 T 11-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 DB34_09990 706d4a019875180f1aa75e44d6bcf7db 233 SUPERFAMILY SSF52317 1 230 2.78E-75 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like DB34_09990 706d4a019875180f1aa75e44d6bcf7db 233 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 2 213 2.8E-46 T 11-10-2018 DB34_09990 706d4a019875180f1aa75e44d6bcf7db 233 SMART SM01211 1 231 2.1E-129 T 11-10-2018 DB34_03920 731ed043a665c793d9b488811d06be06 433 Pfam PF03237 Terminase-like family 45 249 7.8E-15 T 11-10-2018 IPR004921 Terminase large subunit, T4likevirus-type DB34_03920 731ed043a665c793d9b488811d06be06 433 Pfam PF17289 Terminase RNaseH-like domain 267 409 2.7E-13 T 11-10-2018 IPR035421 Terminase, large subunit gp17-like DB34_03920 731ed043a665c793d9b488811d06be06 433 Gene3D G3DSA:3.40.50.300 40 234 1.4E-12 T 11-10-2018 DB34_02905 42380705fef84da8335f24dafd8ca92f 201 Pfam PF17384 RimP C-terminal SH3 domain 103 168 2.7E-10 T 11-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal DB34_02905 42380705fef84da8335f24dafd8ca92f 201 Gene3D G3DSA:3.30.300.70 17 97 2.9E-15 T 11-10-2018 IPR035956 RimP, N-terminal domain superfamily DB34_02905 42380705fef84da8335f24dafd8ca92f 201 Pfam PF02576 RimP N-terminal domain 27 100 1.8E-21 T 11-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal DB34_02905 42380705fef84da8335f24dafd8ca92f 201 SUPERFAMILY SSF74942 101 169 1.44E-13 T 11-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily DB34_02905 42380705fef84da8335f24dafd8ca92f 201 SUPERFAMILY SSF75420 16 100 3.27E-20 T 11-10-2018 IPR035956 RimP, N-terminal domain superfamily DB34_02905 42380705fef84da8335f24dafd8ca92f 201 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 22 169 21.635 T 11-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 DB34_05245 4bb411b13d40e26b7811cf2e184c801b 349 TIGRFAM TIGR00238 TIGR00238: KamA family protein 13 318 5.0E-77 T 11-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase DB34_05245 4bb411b13d40e26b7811cf2e184c801b 349 SUPERFAMILY SSF102114 90 332 9.29E-32 T 11-10-2018 DB34_05245 4bb411b13d40e26b7811cf2e184c801b 349 TIGRFAM TIGR03822 AblA_like_2: lysine-2,3-aminomutase-related protein 15 331 3.1E-149 T 11-10-2018 IPR022447 Lysine-2,3-aminomutase-related DB34_05245 4bb411b13d40e26b7811cf2e184c801b 349 PIRSF PIRSF004911 8 346 1.1E-114 T 11-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase DB34_05245 4bb411b13d40e26b7811cf2e184c801b 349 Pfam PF13353 4Fe-4S single cluster domain 110 161 2.0E-5 T 11-10-2018 DB34_05245 4bb411b13d40e26b7811cf2e184c801b 349 Gene3D G3DSA:3.20.20.70 41 324 1.0E-93 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB34_05245 4bb411b13d40e26b7811cf2e184c801b 349 Pfam PF12544 Lysine-2,3-aminomutase 299 330 1.9E-6 T 11-10-2018 IPR025895 Lysine-2,3-aminomutase, C-terminal domain DB34_05245 4bb411b13d40e26b7811cf2e184c801b 349 Pfam PF04055 Radical SAM superfamily 107 257 9.8E-11 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DB34_03895 ae8d6d0151f66b24a63f5d038892ed78 150 TIGRFAM TIGR00701 TIGR00701: TIGR00701 family protein 11 150 4.4E-50 T 11-10-2018 IPR005265 Uncharacterised protein family UPF0093 DB34_03895 ae8d6d0151f66b24a63f5d038892ed78 150 PIRSF PIRSF004638 4 150 6.3E-56 T 11-10-2018 IPR005265 Uncharacterised protein family UPF0093 DB34_03895 ae8d6d0151f66b24a63f5d038892ed78 150 Pfam PF03653 Uncharacterised protein family (UPF0093) 11 150 5.3E-59 T 11-10-2018 IPR005265 Uncharacterised protein family UPF0093 DB34_00595 348b5a581a84c39ab2fa69e9f73b1798 334 Gene3D G3DSA:3.20.20.70 1 331 3.8E-140 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB34_00595 348b5a581a84c39ab2fa69e9f73b1798 334 SUPERFAMILY SSF51569 5 329 1.76E-140 T 11-10-2018 DB34_00595 348b5a581a84c39ab2fa69e9f73b1798 334 Pfam PF00490 Delta-aminolevulinic acid dehydratase 9 326 3.1E-139 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DB34_00595 348b5a581a84c39ab2fa69e9f73b1798 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 126 140 6.0E-58 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DB34_00595 348b5a581a84c39ab2fa69e9f73b1798 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 156 175 6.0E-58 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DB34_00595 348b5a581a84c39ab2fa69e9f73b1798 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 272 287 6.0E-58 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DB34_00595 348b5a581a84c39ab2fa69e9f73b1798 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 194 213 6.0E-58 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DB34_00595 348b5a581a84c39ab2fa69e9f73b1798 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 247 263 6.0E-58 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DB34_00595 348b5a581a84c39ab2fa69e9f73b1798 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 302 321 6.0E-58 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DB34_00595 348b5a581a84c39ab2fa69e9f73b1798 334 PIRSF PIRSF001415 1 331 1.4E-145 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DB34_00595 348b5a581a84c39ab2fa69e9f73b1798 334 SMART SM01004 6 328 2.2E-232 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DB34_00595 348b5a581a84c39ab2fa69e9f73b1798 334 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 247 259 - T 11-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DB34_11180 0cea19ba60af7e6be84fda5fc73a9c76 662 SUPERFAMILY SSF52922 510 653 2.75E-27 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DB34_11180 0cea19ba60af7e6be84fda5fc73a9c76 662 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 22 645 4.4E-233 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DB34_11180 0cea19ba60af7e6be84fda5fc73a9c76 662 Gene3D G3DSA:3.40.50.970 337 506 4.2E-66 T 11-10-2018 DB34_11180 0cea19ba60af7e6be84fda5fc73a9c76 662 Pfam PF02780 Transketolase, C-terminal domain 533 645 9.4E-22 T 11-10-2018 IPR033248 Transketolase, C-terminal domain DB34_11180 0cea19ba60af7e6be84fda5fc73a9c76 662 ProSitePatterns PS00802 Transketolase signature 2. 444 460 - T 11-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DB34_11180 0cea19ba60af7e6be84fda5fc73a9c76 662 SUPERFAMILY SSF52518 337 522 1.31E-57 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold DB34_11180 0cea19ba60af7e6be84fda5fc73a9c76 662 SUPERFAMILY SSF52518 8 400 1.26E-76 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold DB34_11180 0cea19ba60af7e6be84fda5fc73a9c76 662 ProSitePatterns PS00801 Transketolase signature 1. 44 63 - T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DB34_11180 0cea19ba60af7e6be84fda5fc73a9c76 662 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 19 301 3.1E-114 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DB34_11180 0cea19ba60af7e6be84fda5fc73a9c76 662 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 18 654 44.191 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DB34_11180 0cea19ba60af7e6be84fda5fc73a9c76 662 SMART SM00861 338 503 3.7E-65 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DB34_11180 0cea19ba60af7e6be84fda5fc73a9c76 662 Gene3D G3DSA:3.40.50.920 528 659 8.2E-31 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DB34_11180 0cea19ba60af7e6be84fda5fc73a9c76 662 Pfam PF02779 Transketolase, pyrimidine binding domain 339 498 1.9E-37 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DB34_09405 948e8e1086ef2a9f2e6a637e26afc389 637 Pfam PF01541 GIY-YIG catalytic domain 41 113 4.7E-5 T 11-10-2018 IPR000305 GIY-YIG endonuclease DB34_09405 948e8e1086ef2a9f2e6a637e26afc389 637 Gene3D G3DSA:3.40.1440.10 26 124 1.7E-28 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 DB34_09405 948e8e1086ef2a9f2e6a637e26afc389 637 SMART SM00465 39 120 5.2E-13 T 11-10-2018 IPR000305 GIY-YIG endonuclease DB34_09405 948e8e1086ef2a9f2e6a637e26afc389 637 SUPERFAMILY SSF46600 213 263 4.32E-12 T 11-10-2018 IPR036876 UVR domain superfamily DB34_09405 948e8e1086ef2a9f2e6a637e26afc389 637 Gene3D G3DSA:1.10.150.20 572 630 1.4E-19 T 11-10-2018 DB34_09405 948e8e1086ef2a9f2e6a637e26afc389 637 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 31 610 8.0E-163 T 11-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 DB34_09405 948e8e1086ef2a9f2e6a637e26afc389 637 Gene3D G3DSA:3.30.420.340 396 571 1.1E-47 T 11-10-2018 IPR038476 UvrC homology region 2 superfamily DB34_09405 948e8e1086ef2a9f2e6a637e26afc389 637 SMART SM00278 578 597 1.6 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DB34_09405 948e8e1086ef2a9f2e6a637e26afc389 637 SMART SM00278 610 629 6.4 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DB34_09405 948e8e1086ef2a9f2e6a637e26afc389 637 Pfam PF14520 Helix-hairpin-helix domain 579 626 7.1E-8 T 11-10-2018 DB34_09405 948e8e1086ef2a9f2e6a637e26afc389 637 Pfam PF02151 UvrB/uvrC motif 232 258 2.2E-8 T 11-10-2018 IPR001943 UVR domain GO:0005515 DB34_09405 948e8e1086ef2a9f2e6a637e26afc389 637 SUPERFAMILY SSF47781 547 634 4.13E-21 T 11-10-2018 IPR010994 RuvA domain 2-like DB34_09405 948e8e1086ef2a9f2e6a637e26afc389 637 Hamap MF_00203 UvrABC system protein C [uvrC]. 26 629 27.105 T 11-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 DB34_09405 948e8e1086ef2a9f2e6a637e26afc389 637 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 404 564 6.5E-48 T 11-10-2018 IPR001162 UvrC family homology region DB34_09405 948e8e1086ef2a9f2e6a637e26afc389 637 SUPERFAMILY SSF82771 40 122 1.31E-17 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 DB34_06115 016d24ffc15001f426b1d01ef08d5d48 538 Gene3D G3DSA:3.90.1150.10 33 525 1.2E-211 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB34_06115 016d24ffc15001f426b1d01ef08d5d48 538 Gene3D G3DSA:1.10.20.110 40 405 1.2E-211 T 11-10-2018 DB34_06115 016d24ffc15001f426b1d01ef08d5d48 538 TIGRFAM TIGR03801 asp_4_decarbox: aspartate 4-decarboxylase 14 527 1.1E-225 T 11-10-2018 IPR022518 Aspartate 4-decarboxylase KEGG: 00220+2.6.1.1|KEGG: 00250+4.1.1.12+2.6.1.1|KEGG: 00270+4.1.1.12+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 DB34_06115 016d24ffc15001f426b1d01ef08d5d48 538 SUPERFAMILY SSF53383 126 522 1.21E-45 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB34_06115 016d24ffc15001f426b1d01ef08d5d48 538 Pfam PF00155 Aminotransferase class I and II 162 508 4.5E-23 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DB34_06115 016d24ffc15001f426b1d01ef08d5d48 538 Gene3D G3DSA:3.40.640.10 164 383 1.2E-211 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB34_03495 54e5dcc451ae1cf493b317c0480cab78 365 Gene3D G3DSA:3.40.50.2000 169 340 2.9E-36 T 11-10-2018 DB34_03495 54e5dcc451ae1cf493b317c0480cab78 365 Pfam PF00534 Glycosyl transferases group 1 172 335 1.4E-26 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 DB34_03495 54e5dcc451ae1cf493b317c0480cab78 365 Pfam PF13439 Glycosyltransferase Family 4 58 164 1.2E-8 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 DB34_03495 54e5dcc451ae1cf493b317c0480cab78 365 SUPERFAMILY SSF53756 62 348 8.24E-57 T 11-10-2018 DB34_03495 54e5dcc451ae1cf493b317c0480cab78 365 Gene3D G3DSA:3.40.50.2000 29 168 7.4E-7 T 11-10-2018 DB34_02370 eaf3a105c32c650dbd027a4cd2207d5c 358 Gene3D G3DSA:1.10.287.470 80 115 3.4E-9 T 11-10-2018 DB34_02370 eaf3a105c32c650dbd027a4cd2207d5c 358 SUPERFAMILY SSF111369 181 271 5.36E-11 T 11-10-2018 DB34_02370 eaf3a105c32c650dbd027a4cd2207d5c 358 Gene3D G3DSA:2.40.30.170 227 349 5.0E-33 T 11-10-2018 DB34_02370 eaf3a105c32c650dbd027a4cd2207d5c 358 Gene3D G3DSA:2.40.50.100 48 79 3.4E-9 T 11-10-2018 DB34_02370 eaf3a105c32c650dbd027a4cd2207d5c 358 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 48 289 5.8E-16 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DB34_02370 eaf3a105c32c650dbd027a4cd2207d5c 358 SUPERFAMILY SSF111369 47 104 1.44E-7 T 11-10-2018 DB34_13665 775c50bdca9a2029bacadeb48e82c34a 739 SUPERFAMILY SSF47781 92 168 3.06E-12 T 11-10-2018 IPR010994 RuvA domain 2-like DB34_13665 775c50bdca9a2029bacadeb48e82c34a 739 TIGRFAM TIGR01448 recD_rel: helicase, RecD/TraA family 16 720 1.9E-216 T 11-10-2018 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 DB34_13665 775c50bdca9a2029bacadeb48e82c34a 739 SMART SM00382 345 486 1.4E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_13665 775c50bdca9a2029bacadeb48e82c34a 739 Gene3D G3DSA:1.10.150.20 85 154 3.3E-11 T 11-10-2018 DB34_13665 775c50bdca9a2029bacadeb48e82c34a 739 Gene3D G3DSA:3.40.50.300 316 719 1.5E-151 T 11-10-2018 DB34_13665 775c50bdca9a2029bacadeb48e82c34a 739 Gene3D G3DSA:3.40.50.300 490 714 1.5E-151 T 11-10-2018 DB34_13665 775c50bdca9a2029bacadeb48e82c34a 739 Gene3D G3DSA:1.10.10.2220 193 290 1.5E-17 T 11-10-2018 DB34_13665 775c50bdca9a2029bacadeb48e82c34a 739 Gene3D G3DSA:2.30.30.940 580 651 1.5E-151 T 11-10-2018 DB34_13665 775c50bdca9a2029bacadeb48e82c34a 739 Pfam PF14490 Helix-hairpin-helix containing domain 152 240 1.0E-31 T 11-10-2018 IPR029493 RecD helicase-like helix-hairpin-helix domain DB34_13665 775c50bdca9a2029bacadeb48e82c34a 739 Pfam PF13538 UvrD-like helicase C-terminal domain 651 698 1.6E-18 T 11-10-2018 IPR027785 UvrD-like helicase C-terminal domain DB34_13665 775c50bdca9a2029bacadeb48e82c34a 739 SUPERFAMILY SSF52540 191 490 1.59E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_13665 775c50bdca9a2029bacadeb48e82c34a 739 SUPERFAMILY SSF52540 443 711 1.44E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_13665 775c50bdca9a2029bacadeb48e82c34a 739 Pfam PF14520 Helix-hairpin-helix domain 100 146 1.1E-10 T 11-10-2018 DB34_13665 775c50bdca9a2029bacadeb48e82c34a 739 Hamap MF_01488 ATP-dependent RecD-like DNA helicase [recD2]. 12 739 28.447 T 11-10-2018 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 DB34_13665 775c50bdca9a2029bacadeb48e82c34a 739 SMART SM00278 129 148 0.52 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DB34_13665 775c50bdca9a2029bacadeb48e82c34a 739 SMART SM00278 193 212 36.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DB34_13665 775c50bdca9a2029bacadeb48e82c34a 739 Pfam PF13604 AAA domain 332 511 2.9E-46 T 11-10-2018 DB34_07105 612fef33f29742803f3ed62b6749c2b2 427 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 168 186 1.7E-14 T 11-10-2018 DB34_07105 612fef33f29742803f3ed62b6749c2b2 427 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 290 312 1.7E-14 T 11-10-2018 DB34_07105 612fef33f29742803f3ed62b6749c2b2 427 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.7E-14 T 11-10-2018 DB34_07105 612fef33f29742803f3ed62b6749c2b2 427 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 114 132 1.7E-14 T 11-10-2018 DB34_07105 612fef33f29742803f3ed62b6749c2b2 427 Gene3D G3DSA:3.50.50.100 1 399 1.5E-99 T 11-10-2018 DB34_07105 612fef33f29742803f3ed62b6749c2b2 427 SUPERFAMILY SSF51905 1 338 6.2E-35 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_07105 612fef33f29742803f3ed62b6749c2b2 427 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 330 9.6E-59 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DB34_01265 a09ef47e566d85fc15e7c166e18e6940 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.2E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB34_01265 a09ef47e566d85fc15e7c166e18e6940 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.2E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB34_01265 a09ef47e566d85fc15e7c166e18e6940 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.2E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB34_01265 a09ef47e566d85fc15e7c166e18e6940 298 Pfam PF03466 LysR substrate binding domain 90 285 7.6E-25 T 11-10-2018 IPR005119 LysR, substrate-binding DB34_01265 a09ef47e566d85fc15e7c166e18e6940 298 SUPERFAMILY SSF53850 91 288 2.9E-22 T 11-10-2018 DB34_01265 a09ef47e566d85fc15e7c166e18e6940 298 Gene3D G3DSA:1.10.10.10 1 84 1.5E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB34_01265 a09ef47e566d85fc15e7c166e18e6940 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.1E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB34_01265 a09ef47e566d85fc15e7c166e18e6940 298 Gene3D G3DSA:3.40.190.290 91 289 7.4E-27 T 11-10-2018 DB34_01265 a09ef47e566d85fc15e7c166e18e6940 298 SUPERFAMILY SSF46785 3 82 2.37E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB34_13655 c419afb605626942effa447260dac118 170 SMART SM00477 55 170 0.0078 T 11-10-2018 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 DB34_13655 c419afb605626942effa447260dac118 170 SUPERFAMILY SSF54060 48 157 2.3E-30 T 11-10-2018 DB34_13655 c419afb605626942effa447260dac118 170 Gene3D G3DSA:3.40.570.10 42 165 2.6E-25 T 11-10-2018 DB34_13655 c419afb605626942effa447260dac118 170 Pfam PF01223 DNA/RNA non-specific endonuclease 48 156 6.4E-21 T 11-10-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 DB34_13655 c419afb605626942effa447260dac118 170 ProSitePatterns PS01070 DNA/RNA non-specific endonucleases active site. 116 124 - T 11-10-2018 IPR018524 DNA/RNA non-specific endonuclease, active site GO:0003676|GO:0016787|GO:0046872 DB34_01755 393da99cc128c3bec0cf6e0c44495679 234 SUPERFAMILY SSF81901 30 199 1.4E-31 T 11-10-2018 DB34_01755 393da99cc128c3bec0cf6e0c44495679 234 Gene3D G3DSA:1.25.40.10 25 230 1.0E-39 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB34_01755 393da99cc128c3bec0cf6e0c44495679 234 Pfam PF08238 Sel1 repeat 58 92 0.042 T 11-10-2018 IPR006597 Sel1-like repeat DB34_01755 393da99cc128c3bec0cf6e0c44495679 234 Pfam PF08238 Sel1 repeat 134 165 12.0 T 11-10-2018 IPR006597 Sel1-like repeat DB34_01755 393da99cc128c3bec0cf6e0c44495679 234 Pfam PF08238 Sel1 repeat 96 128 1.4E-6 T 11-10-2018 IPR006597 Sel1-like repeat DB34_01755 393da99cc128c3bec0cf6e0c44495679 234 SMART SM00671 130 165 36.0 T 11-10-2018 IPR006597 Sel1-like repeat DB34_01755 393da99cc128c3bec0cf6e0c44495679 234 SMART SM00671 58 93 9.1E-4 T 11-10-2018 IPR006597 Sel1-like repeat DB34_01755 393da99cc128c3bec0cf6e0c44495679 234 SMART SM00671 94 129 4.2E-5 T 11-10-2018 IPR006597 Sel1-like repeat DB34_01755 393da99cc128c3bec0cf6e0c44495679 234 SMART SM00671 26 57 100.0 T 11-10-2018 IPR006597 Sel1-like repeat DB34_08220 d55edc9f570becf53f96f14a77a9bbbb 206 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 127 204 5.2E-13 T 11-10-2018 IPR006260 TonB/TolA, C-terminal DB34_08220 d55edc9f570becf53f96f14a77a9bbbb 206 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 126 195 1.9E-16 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 DB34_08220 d55edc9f570becf53f96f14a77a9bbbb 206 PRINTS PR01217 Proline rich extensin signature 42 58 6.5E-10 T 11-10-2018 DB34_08220 d55edc9f570becf53f96f14a77a9bbbb 206 PRINTS PR01217 Proline rich extensin signature 78 103 6.5E-10 T 11-10-2018 DB34_08220 d55edc9f570becf53f96f14a77a9bbbb 206 PRINTS PR01217 Proline rich extensin signature 60 77 6.5E-10 T 11-10-2018 DB34_08220 d55edc9f570becf53f96f14a77a9bbbb 206 PRINTS PR01217 Proline rich extensin signature 18 39 6.5E-10 T 11-10-2018 DB34_08220 d55edc9f570becf53f96f14a77a9bbbb 206 Gene3D G3DSA:3.30.1150.10 102 205 1.1E-20 T 11-10-2018 DB34_08220 d55edc9f570becf53f96f14a77a9bbbb 206 SUPERFAMILY SSF74653 120 200 6.28E-18 T 11-10-2018 DB34_01340 032e36ec1f6533b58209fdcc38412eac 386 Pfam PF01966 HD domain 61 194 8.5E-16 T 11-10-2018 IPR006674 HD domain DB34_01340 032e36ec1f6533b58209fdcc38412eac 386 SMART SM00471 57 205 1.6E-11 T 11-10-2018 IPR003607 HD/PDEase domain DB34_01340 032e36ec1f6533b58209fdcc38412eac 386 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 1 380 36.04 T 11-10-2018 IPR023023 dNTP triphosphohydrolase, type 2 GO:0016793 DB34_01340 032e36ec1f6533b58209fdcc38412eac 386 Gene3D G3DSA:1.10.3210.10 1 381 1.0E-129 T 11-10-2018 DB34_01340 032e36ec1f6533b58209fdcc38412eac 386 Pfam PF13286 Phosphohydrolase-associated domain 288 378 2.8E-28 T 11-10-2018 IPR026875 Phosphohydrolase-associated domain DB34_01340 032e36ec1f6533b58209fdcc38412eac 386 SUPERFAMILY SSF109604 14 380 3.14E-85 T 11-10-2018 DB34_01340 032e36ec1f6533b58209fdcc38412eac 386 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 23 380 2.0E-95 T 11-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 DB34_00570 411a2a6f7af1e8ec3048ed372e0265b0 369 SUPERFAMILY SSF53756 9 361 8.24E-41 T 11-10-2018 DB34_00570 411a2a6f7af1e8ec3048ed372e0265b0 369 Pfam PF13579 Glycosyl transferase 4-like domain 19 172 4.8E-12 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 DB34_00570 411a2a6f7af1e8ec3048ed372e0265b0 369 Gene3D G3DSA:3.40.50.2000 192 355 9.1E-22 T 11-10-2018 DB34_00570 411a2a6f7af1e8ec3048ed372e0265b0 369 Gene3D G3DSA:3.40.50.2000 9 185 3.9E-10 T 11-10-2018 DB34_00570 411a2a6f7af1e8ec3048ed372e0265b0 369 Pfam PF13692 Glycosyl transferases group 1 199 333 8.3E-17 T 11-10-2018 DB34_12240 c70a72d04ebe687336f84981115cd88a 277 Pfam PF11306 Protein of unknown function (DUF3108) 29 270 6.1E-14 T 11-10-2018 IPR021457 Protein of unknown function DUF3108 DB34_12555 b5dad5fbc60a8471c4d763de19ad399c 231 Gene3D G3DSA:3.40.50.150 22 210 3.4E-31 T 11-10-2018 DB34_12555 b5dad5fbc60a8471c4d763de19ad399c 231 Pfam PF08241 Methyltransferase domain 69 165 1.3E-21 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 DB34_12555 b5dad5fbc60a8471c4d763de19ad399c 231 SUPERFAMILY SSF53335 31 205 7.83E-34 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB34_01605 32b598d4521c25bae5621e5addacb1ec 164 SUPERFAMILY SSF54611 12 161 1.37E-26 T 11-10-2018 IPR035958 SecB-like superfamily DB34_01605 32b598d4521c25bae5621e5addacb1ec 164 Pfam PF02556 Preprotein translocase subunit SecB 17 161 3.2E-32 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 DB34_01605 32b598d4521c25bae5621e5addacb1ec 164 Gene3D G3DSA:3.10.420.10 5 163 1.5E-35 T 11-10-2018 IPR035958 SecB-like superfamily DB34_08640 ab2071ba18ef6779e35f79882df483ac 204 SUPERFAMILY SSF52166 1 203 2.75E-66 T 11-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 DB34_08640 ab2071ba18ef6779e35f79882df483ac 204 Gene3D G3DSA:3.40.1370.10 2 204 1.0E-66 T 11-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 DB34_08640 ab2071ba18ef6779e35f79882df483ac 204 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 17 200 6.9E-67 T 11-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_08640 ab2071ba18ef6779e35f79882df483ac 204 Pfam PF00573 Ribosomal protein L4/L1 family 17 202 1.9E-59 T 11-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 DB34_08640 ab2071ba18ef6779e35f79882df483ac 204 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 8 204 30.397 T 11-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_12465 075476b3773007248fb4017fb21b4caa 341 Pfam PF12697 Alpha/beta hydrolase family 121 329 3.6E-11 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DB34_12465 075476b3773007248fb4017fb21b4caa 341 Gene3D G3DSA:3.40.50.1820 91 340 3.4E-41 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold DB34_12465 075476b3773007248fb4017fb21b4caa 341 SUPERFAMILY SSF53474 95 339 1.8E-43 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold DB34_01700 04cc0ae796ce766316398e7e4f1f0760 168 SMART SM00903 19 166 5.6E-39 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 DB34_01700 04cc0ae796ce766316398e7e4f1f0760 168 SUPERFAMILY SSF50475 10 163 7.36E-38 T 11-10-2018 DB34_01700 04cc0ae796ce766316398e7e4f1f0760 168 Pfam PF01613 Flavin reductase like domain 19 165 4.3E-28 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 DB34_01700 04cc0ae796ce766316398e7e4f1f0760 168 Gene3D G3DSA:2.30.110.10 3 167 8.6E-38 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 DB34_07585 b982b791306e9433fdda4f0c7212b94a 805 Gene3D G3DSA:3.30.70.100 713 800 7.2E-5 T 11-10-2018 DB34_07585 b982b791306e9433fdda4f0c7212b94a 805 SUPERFAMILY SSF82861 556 638 1.27E-9 T 11-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 DB34_07585 b982b791306e9433fdda4f0c7212b94a 805 Gene3D G3DSA:2.30.30.60 655 703 5.9E-12 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily DB34_07585 b982b791306e9433fdda4f0c7212b94a 805 SUPERFAMILY SSF82689 713 796 3.4E-7 T 11-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 DB34_07585 b982b791306e9433fdda4f0c7212b94a 805 Pfam PF12607 Protein of unknown function (DUF3772) 159 216 6.2E-8 T 11-10-2018 IPR022249 Domain of unknown function DUF3772 DB34_07585 b982b791306e9433fdda4f0c7212b94a 805 Pfam PF00924 Mechanosensitive ion channel 598 794 2.4E-41 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 DB34_07585 b982b791306e9433fdda4f0c7212b94a 805 SUPERFAMILY SSF50182 640 704 5.56E-16 T 11-10-2018 IPR010920 LSM domain superfamily DB34_10745 7a0a01ec411e6da68f822bb427eac126 180 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 133 161 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 DB34_10745 7a0a01ec411e6da68f822bb427eac126 180 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 72 103 0.096 T 11-10-2018 IPR001451 Hexapeptide repeat DB34_10745 7a0a01ec411e6da68f822bb427eac126 180 Gene3D G3DSA:2.160.10.10 1 180 1.4E-63 T 11-10-2018 DB34_10745 7a0a01ec411e6da68f822bb427eac126 180 SMART SM01266 7 53 2.7E-10 T 11-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 DB34_10745 7a0a01ec411e6da68f822bb427eac126 180 Pfam PF12464 Maltose acetyltransferase 9 44 4.4E-10 T 11-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 DB34_10745 7a0a01ec411e6da68f822bb427eac126 180 SUPERFAMILY SSF51161 6 178 2.63E-51 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily DB34_10745 7a0a01ec411e6da68f822bb427eac126 180 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 124 159 4.7E-10 T 11-10-2018 IPR001451 Hexapeptide repeat DB34_12820 ebcc8005726125fb13e8d8d79be93e5d 395 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 7 382 34.268 T 11-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 DB34_12820 ebcc8005726125fb13e8d8d79be93e5d 395 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 12 383 1.1E-87 T 11-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 DB34_12820 ebcc8005726125fb13e8d8d79be93e5d 395 Pfam PF02684 Lipid-A-disaccharide synthetase 11 365 1.6E-100 T 11-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 DB34_12820 ebcc8005726125fb13e8d8d79be93e5d 395 SUPERFAMILY SSF53756 10 308 7.68E-30 T 11-10-2018 DB34_02405 c037f6eca56357d3b816c73a55584a50 210 SUPERFAMILY SSF52499 26 207 2.09E-49 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 DB34_02405 c037f6eca56357d3b816c73a55584a50 210 Gene3D G3DSA:3.40.50.850 6 210 1.3E-57 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 DB34_02405 c037f6eca56357d3b816c73a55584a50 210 Pfam PF00857 Isochorismatase family 29 200 4.8E-41 T 11-10-2018 IPR000868 Isochorismatase-like GO:0003824 DB34_03590 9ecb0da12cbd2c6d9e6db3d701e31802 645 Pfam PF01434 Peptidase family M41 386 594 1.1E-77 T 11-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 DB34_03590 9ecb0da12cbd2c6d9e6db3d701e31802 645 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 192 324 1.5E-45 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DB34_03590 9ecb0da12cbd2c6d9e6db3d701e31802 645 SUPERFAMILY SSF52540 145 395 1.48E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_03590 9ecb0da12cbd2c6d9e6db3d701e31802 645 SMART SM00382 188 327 2.4E-25 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_03590 9ecb0da12cbd2c6d9e6db3d701e31802 645 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 6 608 37.349 T 11-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 DB34_03590 9ecb0da12cbd2c6d9e6db3d701e31802 645 ProSitePatterns PS00674 AAA-protein family signature. 295 313 - T 11-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 DB34_03590 9ecb0da12cbd2c6d9e6db3d701e31802 645 Gene3D G3DSA:1.10.8.60 326 400 9.2E-29 T 11-10-2018 DB34_03590 9ecb0da12cbd2c6d9e6db3d701e31802 645 Gene3D G3DSA:1.20.58.760 401 607 2.9E-73 T 11-10-2018 DB34_03590 9ecb0da12cbd2c6d9e6db3d701e31802 645 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 105 595 1.7E-231 T 11-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 DB34_03590 9ecb0da12cbd2c6d9e6db3d701e31802 645 Pfam PF06480 FtsH Extracellular 10 96 5.7E-11 T 11-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 DB34_03590 9ecb0da12cbd2c6d9e6db3d701e31802 645 Gene3D G3DSA:2.40.50.920 29 104 1.4E-10 T 11-10-2018 DB34_03590 9ecb0da12cbd2c6d9e6db3d701e31802 645 SUPERFAMILY SSF140990 406 603 2.22E-73 T 11-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 DB34_03590 9ecb0da12cbd2c6d9e6db3d701e31802 645 Gene3D G3DSA:3.40.50.300 143 324 4.9E-70 T 11-10-2018 DB34_05930 ee390f184be3eab4f02179c50533c612 432 SUPERFAMILY SSF56176 350 428 2.34E-18 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 DB34_05930 ee390f184be3eab4f02179c50533c612 432 Pfam PF00571 CBS domain 283 332 2.8E-5 T 11-10-2018 IPR000644 CBS domain DB34_05930 ee390f184be3eab4f02179c50533c612 432 Gene3D G3DSA:3.30.465.10 349 427 1.3E-21 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 DB34_05930 ee390f184be3eab4f02179c50533c612 432 Pfam PF01595 Domain of unknown function DUF21 6 198 1.6E-43 T 11-10-2018 IPR002550 CNNM, transmembrane domain DB34_05930 ee390f184be3eab4f02179c50533c612 432 Pfam PF03471 Transporter associated domain 352 427 3.4E-20 T 11-10-2018 IPR005170 Transporter-associated domain DB34_05930 ee390f184be3eab4f02179c50533c612 432 SUPERFAMILY SSF54631 201 334 8.96E-24 T 11-10-2018 DB34_05930 ee390f184be3eab4f02179c50533c612 432 Gene3D G3DSA:3.10.580.10 194 346 3.9E-38 T 11-10-2018 DB34_05930 ee390f184be3eab4f02179c50533c612 432 SMART SM01091 348 428 6.2E-24 T 11-10-2018 IPR005170 Transporter-associated domain DB34_11850 c4e16ddb739c984a41ccf3370ad09095 205 Gene3D G3DSA:3.40.50.150 2 203 1.3E-47 T 11-10-2018 DB34_11850 c4e16ddb739c984a41ccf3370ad09095 205 Pfam PF01596 O-methyltransferase 40 169 2.1E-16 T 11-10-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 DB34_11850 c4e16ddb739c984a41ccf3370ad09095 205 SUPERFAMILY SSF53335 31 202 2.07E-39 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB34_08690 6e361ca0f063910f3efb87c022a6d5fe 106 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 11-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_08690 6e361ca0f063910f3efb87c022a6d5fe 106 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 40 104 1.8E-25 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_08690 6e361ca0f063910f3efb87c022a6d5fe 106 SUPERFAMILY SSF50104 4 102 3.31E-33 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily DB34_08690 6e361ca0f063910f3efb87c022a6d5fe 106 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 98 20.761 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_08690 6e361ca0f063910f3efb87c022a6d5fe 106 Pfam PF00467 KOW motif 7 37 1.7E-5 T 11-10-2018 IPR005824 KOW DB34_08690 6e361ca0f063910f3efb87c022a6d5fe 106 Gene3D G3DSA:2.30.30.30 1 103 5.0E-37 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 DB34_08690 6e361ca0f063910f3efb87c022a6d5fe 106 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 104 1.6E-36 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_08690 6e361ca0f063910f3efb87c022a6d5fe 106 SMART SM00739 4 31 1.1E-5 T 11-10-2018 IPR005824 KOW DB34_10065 19e40861d64d033cb8e718fe7b5a7269 336 Pfam PF00676 Dehydrogenase E1 component 29 325 1.3E-105 T 11-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 DB34_10065 19e40861d64d033cb8e718fe7b5a7269 336 TIGRFAM TIGR03182 PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 21 332 1.3E-149 T 11-10-2018 IPR017597 Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y GO:0004739|GO:0006086|GO:0043231 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-70268 DB34_10065 19e40861d64d033cb8e718fe7b5a7269 336 SUPERFAMILY SSF52518 15 335 1.13E-106 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold DB34_10065 19e40861d64d033cb8e718fe7b5a7269 336 Gene3D G3DSA:3.40.50.970 1 336 2.2E-133 T 11-10-2018 DB34_11630 9e851f2076e263e109615f6d3b279ec2 114 Gene3D G3DSA:1.10.260.40 1 67 3.5E-17 T 11-10-2018 DB34_11630 9e851f2076e263e109615f6d3b279ec2 114 SMART SM00530 10 64 2.4E-13 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DB34_11630 9e851f2076e263e109615f6d3b279ec2 114 Pfam PF13560 Helix-turn-helix domain 7 61 6.0E-13 T 11-10-2018 DB34_11630 9e851f2076e263e109615f6d3b279ec2 114 SUPERFAMILY SSF47413 3 70 1.05E-15 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DB34_05985 dfc7a5388b8a752607c045fed10b70d1 343 Pfam PF01061 ABC-2 type transporter 104 304 3.5E-8 T 11-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 DB34_11855 4b0359f6c81eb485f2b0159ac94c52d0 196 SUPERFAMILY SSF46785 39 133 7.64E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB34_11855 4b0359f6c81eb485f2b0159ac94c52d0 196 Pfam PF03551 Transcriptional regulator PadR-like family 55 123 1.3E-17 T 11-10-2018 IPR005149 Transcription regulator PadR, N-terminal DB34_11855 4b0359f6c81eb485f2b0159ac94c52d0 196 Gene3D G3DSA:1.10.10.10 38 143 3.3E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB34_07350 9b9a2defffa3c3091929639bfc4e8403 135 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 4 132 21.681 T 11-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 DB34_07350 9b9a2defffa3c3091929639bfc4e8403 135 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 6 132 2.6E-23 T 11-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 DB34_07350 9b9a2defffa3c3091929639bfc4e8403 135 SUPERFAMILY SSF56214 4 129 3.53E-27 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 DB34_07350 9b9a2defffa3c3091929639bfc4e8403 135 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 9 105 2.0E-27 T 11-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 DB34_07350 9b9a2defffa3c3091929639bfc4e8403 135 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 5 132 1.0E-23 T 11-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 DB34_07350 9b9a2defffa3c3091929639bfc4e8403 135 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 7 101 6.7E-19 T 11-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 DB34_07350 9b9a2defffa3c3091929639bfc4e8403 135 Gene3D G3DSA:3.90.470.20 1 132 5.6E-31 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 DB34_02095 d40f8b53f4d92c74e742572972dff62b 332 Gene3D G3DSA:3.40.50.720 1 190 5.4E-51 T 11-10-2018 DB34_02095 d40f8b53f4d92c74e742572972dff62b 332 SMART SM01350 192 327 8.6E-6 T 11-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DB34_02095 d40f8b53f4d92c74e742572972dff62b 332 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 159 3.4E-40 T 11-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 DB34_02095 d40f8b53f4d92c74e742572972dff62b 332 TIGRFAM TIGR00872 gnd_rel: 6-phosphogluconate dehydrogenase (decarboxylating) 1 331 8.7E-116 T 11-10-2018 IPR004849 6-phosphogluconate dehydrogenase, YqeC-type GO:0055114 DB34_02095 d40f8b53f4d92c74e742572972dff62b 332 SUPERFAMILY SSF48179 190 314 5.58E-38 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DB34_02095 d40f8b53f4d92c74e742572972dff62b 332 Gene3D G3DSA:1.10.1040.10 191 330 1.1E-53 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DB34_02095 d40f8b53f4d92c74e742572972dff62b 332 SUPERFAMILY SSF51735 1 165 6.96E-45 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily DB34_02095 d40f8b53f4d92c74e742572972dff62b 332 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 265 292 3.9E-21 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DB34_02095 d40f8b53f4d92c74e742572972dff62b 332 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 181 209 3.9E-21 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DB34_02095 d40f8b53f4d92c74e742572972dff62b 332 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 1 24 3.9E-21 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DB34_02095 d40f8b53f4d92c74e742572972dff62b 332 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 192 308 2.0E-21 T 11-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DB34_01740 7a7ea1a966585aa1827bc0f42558893b 292 SUPERFAMILY SSF51197 13 289 4.03E-75 T 11-10-2018 DB34_01740 7a7ea1a966585aa1827bc0f42558893b 292 Gene3D G3DSA:3.60.130.10 1 291 1.2E-78 T 11-10-2018 DB34_01740 7a7ea1a966585aa1827bc0f42558893b 292 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 21 275 8.9E-46 T 11-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 DB34_13010 ff70cdf9ea0b7694995e7b41cad58c96 416 Gene3D G3DSA:3.50.50.60 23 361 9.5E-96 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_13010 ff70cdf9ea0b7694995e7b41cad58c96 416 Pfam PF01494 FAD binding domain 21 371 1.1E-30 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 DB34_13010 ff70cdf9ea0b7694995e7b41cad58c96 416 Gene3D G3DSA:3.30.9.50 96 294 9.5E-96 T 11-10-2018 DB34_13010 ff70cdf9ea0b7694995e7b41cad58c96 416 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 23 415 4.9E-116 T 11-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 DB34_13010 ff70cdf9ea0b7694995e7b41cad58c96 416 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 319 332 - T 11-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 DB34_13010 ff70cdf9ea0b7694995e7b41cad58c96 416 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 175 190 3.9E-20 T 11-10-2018 DB34_13010 ff70cdf9ea0b7694995e7b41cad58c96 416 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 305 320 3.9E-20 T 11-10-2018 DB34_13010 ff70cdf9ea0b7694995e7b41cad58c96 416 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 23 45 3.9E-20 T 11-10-2018 DB34_13010 ff70cdf9ea0b7694995e7b41cad58c96 416 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 320 336 3.9E-20 T 11-10-2018 DB34_13010 ff70cdf9ea0b7694995e7b41cad58c96 416 SUPERFAMILY SSF51905 21 409 1.25E-58 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_08100 8090a5bdf9ea664bc695af00899f42d8 368 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 15 323 7.9E-91 T 11-10-2018 IPR017861 Kae1/TsaD family DB34_08100 8090a5bdf9ea664bc695af00899f42d8 368 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 14 354 57.017 T 11-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 DB34_08100 8090a5bdf9ea664bc695af00899f42d8 368 Gene3D G3DSA:3.30.420.40 14 332 1.7E-114 T 11-10-2018 DB34_08100 8090a5bdf9ea664bc695af00899f42d8 368 SUPERFAMILY SSF53067 14 131 9.23E-28 T 11-10-2018 DB34_08100 8090a5bdf9ea664bc695af00899f42d8 368 Pfam PF00814 Glycoprotease family 34 324 7.1E-93 T 11-10-2018 IPR000905 Gcp-like domain DB34_08100 8090a5bdf9ea664bc695af00899f42d8 368 SUPERFAMILY SSF53067 111 325 1.34E-36 T 11-10-2018 DB34_08100 8090a5bdf9ea664bc695af00899f42d8 368 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 14 330 3.2E-115 T 11-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 DB34_08100 8090a5bdf9ea664bc695af00899f42d8 368 Gene3D G3DSA:3.30.420.40 142 310 1.7E-114 T 11-10-2018 DB34_08100 8090a5bdf9ea664bc695af00899f42d8 368 ProSitePatterns PS01016 Glycoprotease family signature. 106 126 - T 11-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 DB34_08100 8090a5bdf9ea664bc695af00899f42d8 368 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 167 188 1.7E-42 T 11-10-2018 IPR017861 Kae1/TsaD family DB34_08100 8090a5bdf9ea664bc695af00899f42d8 368 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 280 289 1.7E-42 T 11-10-2018 IPR017861 Kae1/TsaD family DB34_08100 8090a5bdf9ea664bc695af00899f42d8 368 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 86 106 1.7E-42 T 11-10-2018 IPR017861 Kae1/TsaD family DB34_08100 8090a5bdf9ea664bc695af00899f42d8 368 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 15 28 1.7E-42 T 11-10-2018 IPR017861 Kae1/TsaD family DB34_08100 8090a5bdf9ea664bc695af00899f42d8 368 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 144 156 1.7E-42 T 11-10-2018 IPR017861 Kae1/TsaD family DB34_08100 8090a5bdf9ea664bc695af00899f42d8 368 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 107 126 1.7E-42 T 11-10-2018 IPR017861 Kae1/TsaD family DB34_06925 59750313b8f86898c25550bf920518b5 197 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 4 180 1.4E-21 T 11-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 DB34_06925 59750313b8f86898c25550bf920518b5 197 Pfam PF04973 Nicotinamide mononucleotide transporter 4 180 1.9E-41 T 11-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 DB34_06060 a70babdfef02257bc4567bd2e15e4d0b 337 Gene3D G3DSA:1.10.3470.10 4 336 3.7E-80 T 11-10-2018 IPR037294 ABC transporter, BtuC-like DB34_06060 a70babdfef02257bc4567bd2e15e4d0b 337 SUPERFAMILY SSF81345 5 324 9.02E-63 T 11-10-2018 IPR037294 ABC transporter, BtuC-like DB34_06060 a70babdfef02257bc4567bd2e15e4d0b 337 Pfam PF01032 FecCD transport family 17 323 3.6E-74 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 DB34_00030 3fbda70aa5a9ac784058d40c6895420d 315 Pfam PF00589 Phage integrase family 140 298 2.3E-36 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 DB34_00030 3fbda70aa5a9ac784058d40c6895420d 315 SUPERFAMILY SSF56349 143 312 6.18E-49 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DB34_00030 3fbda70aa5a9ac784058d40c6895420d 315 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 5 314 49.781 T 11-10-2018 IPR023009 Tyrosine recombinase XerC/XerD DB34_00030 3fbda70aa5a9ac784058d40c6895420d 315 SUPERFAMILY SSF47823 5 108 5.3E-11 T 11-10-2018 DB34_00030 3fbda70aa5a9ac784058d40c6895420d 315 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 7 106 3.6E-12 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 DB34_00030 3fbda70aa5a9ac784058d40c6895420d 315 Gene3D G3DSA:1.10.150.130 3 114 1.1E-17 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal DB34_00030 3fbda70aa5a9ac784058d40c6895420d 315 Gene3D G3DSA:1.10.443.10 133 306 4.2E-50 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 DB34_08805 c6209e067b8c735671cccca7cfcdbae2 411 SUPERFAMILY SSF111369 87 321 1.7E-53 T 11-10-2018 DB34_08805 c6209e067b8c735671cccca7cfcdbae2 411 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 96 317 3.2E-15 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DB34_08805 c6209e067b8c735671cccca7cfcdbae2 411 Gene3D G3DSA:2.40.50.100 94 238 1.4E-87 T 11-10-2018 DB34_08805 c6209e067b8c735671cccca7cfcdbae2 411 Gene3D G3DSA:2.40.420.20 328 396 1.4E-87 T 11-10-2018 DB34_08805 c6209e067b8c735671cccca7cfcdbae2 411 Gene3D G3DSA:1.10.287.470 129 202 1.4E-87 T 11-10-2018 DB34_08805 c6209e067b8c735671cccca7cfcdbae2 411 Gene3D G3DSA:2.40.30.170 87 327 1.4E-87 T 11-10-2018 DB34_08805 c6209e067b8c735671cccca7cfcdbae2 411 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 70 398 2.2E-76 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 DB34_01185 bd3c275477a3c9cbc30a8d74a3882806 706 SUPERFAMILY SSF51011 595 702 1.44E-18 T 11-10-2018 DB34_01185 bd3c275477a3c9cbc30a8d74a3882806 706 Gene3D G3DSA:3.20.20.80 149 588 5.4E-169 T 11-10-2018 DB34_01185 bd3c275477a3c9cbc30a8d74a3882806 706 SUPERFAMILY SSF51445 152 582 2.32E-129 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily DB34_01185 bd3c275477a3c9cbc30a8d74a3882806 706 Gene3D G3DSA:2.60.40.10 4 146 6.9E-47 T 11-10-2018 IPR013783 Immunoglobulin-like fold DB34_01185 bd3c275477a3c9cbc30a8d74a3882806 706 Gene3D G3DSA:2.60.40.1180 594 702 3.4E-13 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta DB34_01185 bd3c275477a3c9cbc30a8d74a3882806 706 Pfam PF00128 Alpha amylase, catalytic domain 197 284 6.7E-10 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DB34_01185 bd3c275477a3c9cbc30a8d74a3882806 706 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 16 104 1.4E-16 T 11-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 DB34_01185 bd3c275477a3c9cbc30a8d74a3882806 706 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 12 702 3.2E-298 T 11-10-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 DB34_01185 bd3c275477a3c9cbc30a8d74a3882806 706 SMART SM00642 167 574 8.0E-9 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DB34_01185 bd3c275477a3c9cbc30a8d74a3882806 706 SUPERFAMILY SSF81296 12 147 3.64E-42 T 11-10-2018 IPR014756 Immunoglobulin E-set DB34_06155 73edf40f9e413fd5927564393a5ec6a8 180 Pfam PF07291 Methylamine utilisation protein MauE 17 161 3.4E-23 T 11-10-2018 IPR009908 Methylamine utilisation protein, MauE GO:0016021|GO:0030416 DB34_11805 bc1d1f46bc693babcc6be292303f8e1f 163 Pfam PF00593 TonB dependent receptor 25 123 3.3E-12 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel DB34_11805 bc1d1f46bc693babcc6be292303f8e1f 163 SUPERFAMILY SSF56935 12 163 1.72E-19 T 11-10-2018 DB34_11805 bc1d1f46bc693babcc6be292303f8e1f 163 Gene3D G3DSA:2.40.170.20 11 163 2.7E-20 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DB34_02340 e998475a03cf3755d55ac13a17c9981d 261 Pfam PF01925 Sulfite exporter TauE/SafE 14 253 8.9E-54 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 DB34_11170 5688b43fc50d8d1176caa0c69323aa37 76 PIRSF PIRSF006488 1 74 1.9E-21 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 DB34_11170 5688b43fc50d8d1176caa0c69323aa37 76 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 9 69 15.718 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 DB34_11170 5688b43fc50d8d1176caa0c69323aa37 76 Pfam PF02609 Exonuclease VII small subunit 10 60 4.7E-19 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 DB34_11170 5688b43fc50d8d1176caa0c69323aa37 76 Gene3D G3DSA:1.10.287.1040 4 76 2.5E-22 T 11-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 DB34_11170 5688b43fc50d8d1176caa0c69323aa37 76 SUPERFAMILY SSF116842 3 74 1.57E-21 T 11-10-2018 DB34_11170 5688b43fc50d8d1176caa0c69323aa37 76 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 9 49 5.0E-15 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 DB34_11170 5688b43fc50d8d1176caa0c69323aa37 76 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 9 64 2.5E-22 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 DB34_10245 294c8b43ef26f6491de8897eb5ba4cb2 499 SUPERFAMILY SSF53067 254 496 1.94E-80 T 11-10-2018 DB34_10245 294c8b43ef26f6491de8897eb5ba4cb2 499 Hamap MF_00186 Glycerol kinase [glpK]. 4 496 54.242 T 11-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 DB34_10245 294c8b43ef26f6491de8897eb5ba4cb2 499 PIRSF PIRSF000538 4 498 8.6E-174 T 11-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DB34_10245 294c8b43ef26f6491de8897eb5ba4cb2 499 Gene3D G3DSA:3.30.420.40 253 495 6.6E-89 T 11-10-2018 DB34_10245 294c8b43ef26f6491de8897eb5ba4cb2 499 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 361 381 - T 11-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DB34_10245 294c8b43ef26f6491de8897eb5ba4cb2 499 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 260 449 3.6E-54 T 11-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 DB34_10245 294c8b43ef26f6491de8897eb5ba4cb2 499 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 7 251 9.2E-77 T 11-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 DB34_10245 294c8b43ef26f6491de8897eb5ba4cb2 499 Gene3D G3DSA:3.30.420.40 5 252 2.5E-109 T 11-10-2018 DB34_10245 294c8b43ef26f6491de8897eb5ba4cb2 499 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 6 493 5.8E-215 T 11-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 DB34_10245 294c8b43ef26f6491de8897eb5ba4cb2 499 SUPERFAMILY SSF53067 6 254 2.06E-93 T 11-10-2018 DB34_10245 294c8b43ef26f6491de8897eb5ba4cb2 499 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 135 147 - T 11-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DB34_09095 48a05afc1fe12cad96f9cb629868ad9c 199 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 19 190 9.0E-82 T 11-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 DB34_09095 48a05afc1fe12cad96f9cb629868ad9c 199 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 18 190 40.314 T 11-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 DB34_09095 48a05afc1fe12cad96f9cb629868ad9c 199 PIRSF PIRSF039093 13 193 1.0E-82 T 11-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 DB34_09095 48a05afc1fe12cad96f9cb629868ad9c 199 Gene3D G3DSA:3.60.20.10 14 191 8.2E-69 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DB34_09095 48a05afc1fe12cad96f9cb629868ad9c 199 SUPERFAMILY SSF56235 16 190 1.51E-57 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DB34_09095 48a05afc1fe12cad96f9cb629868ad9c 199 Pfam PF00227 Proteasome subunit 17 189 6.6E-23 T 11-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 DB34_11090 3965a29c5e54c075dee7c30b9a8b894f 203 SUPERFAMILY SSF47616 88 201 4.26E-16 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DB34_11090 3965a29c5e54c075dee7c30b9a8b894f 203 Gene3D G3DSA:1.20.1050.10 84 190 4.4E-58 T 11-10-2018 DB34_11090 3965a29c5e54c075dee7c30b9a8b894f 203 Gene3D G3DSA:3.40.30.10 4 197 4.4E-58 T 11-10-2018 DB34_11090 3965a29c5e54c075dee7c30b9a8b894f 203 Pfam PF14497 Glutathione S-transferase, C-terminal domain 104 198 1.4E-5 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal DB34_11090 3965a29c5e54c075dee7c30b9a8b894f 203 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 75 1.0E-7 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 DB34_11090 3965a29c5e54c075dee7c30b9a8b894f 203 SUPERFAMILY SSF52833 2 77 3.04E-14 T 11-10-2018 IPR036249 Thioredoxin-like superfamily DB34_08195 ed5943298a88d13904011faf543da23d 216 Pfam PF00881 Nitroreductase family 9 192 4.6E-24 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 DB34_08195 ed5943298a88d13904011faf543da23d 216 Gene3D G3DSA:3.40.109.10 2 216 2.2E-53 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DB34_08195 ed5943298a88d13904011faf543da23d 216 SUPERFAMILY SSF55469 3 214 1.15E-58 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DB34_09720 b0558fd53c49e2da12ee9f08369d7380 270 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 203 219 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 DB34_09720 b0558fd53c49e2da12ee9f08369d7380 270 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 12 20 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 DB34_09720 b0558fd53c49e2da12ee9f08369d7380 270 Gene3D G3DSA:3.20.20.140 4 269 1.3E-76 T 11-10-2018 DB34_09720 b0558fd53c49e2da12ee9f08369d7380 270 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 137 147 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 DB34_09720 b0558fd53c49e2da12ee9f08369d7380 270 SUPERFAMILY SSF51556 12 267 7.61E-73 T 11-10-2018 IPR032466 Metal-dependent hydrolase DB34_09720 b0558fd53c49e2da12ee9f08369d7380 270 Pfam PF01026 TatD related DNase 13 266 3.9E-68 T 11-10-2018 IPR001130 TatD family GO:0016788 DB34_09720 b0558fd53c49e2da12ee9f08369d7380 270 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 12 267 3.8E-73 T 11-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 DB34_09720 b0558fd53c49e2da12ee9f08369d7380 270 PIRSF PIRSF005902 2 270 6.4E-67 T 11-10-2018 IPR001130 TatD family GO:0016788 DB34_08070 62e543a7afe16e343cba3a916390d6eb 318 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 196 205 3.0E-38 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DB34_08070 62e543a7afe16e343cba3a916390d6eb 318 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 152 165 3.0E-38 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DB34_08070 62e543a7afe16e343cba3a916390d6eb 318 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 112 130 3.0E-38 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DB34_08070 62e543a7afe16e343cba3a916390d6eb 318 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 168 181 3.0E-38 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DB34_08070 62e543a7afe16e343cba3a916390d6eb 318 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 87 98 3.0E-38 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DB34_08070 62e543a7afe16e343cba3a916390d6eb 318 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 133 149 3.0E-38 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DB34_08070 62e543a7afe16e343cba3a916390d6eb 318 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 314 4.0E-130 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DB34_08070 62e543a7afe16e343cba3a916390d6eb 318 SUPERFAMILY SSF52096 5 314 5.26E-94 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DB34_08070 62e543a7afe16e343cba3a916390d6eb 318 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 4 146 1.4E-61 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DB34_08070 62e543a7afe16e343cba3a916390d6eb 318 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 4 315 46.892 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DB34_08070 62e543a7afe16e343cba3a916390d6eb 318 Gene3D G3DSA:3.90.226.10 1 315 5.9E-112 T 11-10-2018 DB34_09755 fd87a745f3ec61dac57e4d671e433f31 499 TIGRFAM TIGR01320 mal_quin_oxido: malate dehydrogenase (acceptor) 12 494 5.1E-230 T 11-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 DB34_09755 fd87a745f3ec61dac57e4d671e433f31 499 Gene3D G3DSA:3.50.50.60 13 268 3.0E-7 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_09755 fd87a745f3ec61dac57e4d671e433f31 499 SUPERFAMILY SSF51905 10 335 7.51E-24 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_09755 fd87a745f3ec61dac57e4d671e433f31 499 Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. 8 496 53.468 T 11-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 DB34_09755 fd87a745f3ec61dac57e4d671e433f31 499 Gene3D G3DSA:3.30.9.10 117 289 3.0E-7 T 11-10-2018 DB34_09755 fd87a745f3ec61dac57e4d671e433f31 499 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 11 496 7.2E-242 T 11-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 DB34_05400 edfa0ea68a31ccf1da20ef0c5a42a93d 97 Pfam PF01206 Sulfurtransferase TusA 21 90 2.1E-13 T 11-10-2018 IPR001455 TusA-like domain DB34_05400 edfa0ea68a31ccf1da20ef0c5a42a93d 97 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 22 46 - T 11-10-2018 IPR001455 TusA-like domain DB34_05400 edfa0ea68a31ccf1da20ef0c5a42a93d 97 SUPERFAMILY SSF64307 12 90 6.15E-15 T 11-10-2018 IPR036868 TusA-like domain superfamily DB34_05400 edfa0ea68a31ccf1da20ef0c5a42a93d 97 Gene3D G3DSA:3.30.110.40 20 90 1.9E-11 T 11-10-2018 IPR036868 TusA-like domain superfamily DB34_07140 3d12318e00af250fd116e0e9a8ec1d87 265 PRINTS PR00111 Alpha/beta hydrolase fold signature 98 111 4.5E-5 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DB34_07140 3d12318e00af250fd116e0e9a8ec1d87 265 PRINTS PR00111 Alpha/beta hydrolase fold signature 202 216 4.5E-5 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DB34_07140 3d12318e00af250fd116e0e9a8ec1d87 265 PRINTS PR00111 Alpha/beta hydrolase fold signature 84 97 4.5E-5 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DB34_07140 3d12318e00af250fd116e0e9a8ec1d87 265 PRINTS PR00111 Alpha/beta hydrolase fold signature 42 57 4.5E-5 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DB34_07140 3d12318e00af250fd116e0e9a8ec1d87 265 Gene3D G3DSA:3.40.50.1820 7 257 2.9E-54 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold DB34_07140 3d12318e00af250fd116e0e9a8ec1d87 265 SUPERFAMILY SSF53474 4 255 1.06E-47 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold DB34_07140 3d12318e00af250fd116e0e9a8ec1d87 265 Pfam PF12697 Alpha/beta hydrolase family 19 250 2.2E-17 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DB34_09685 083ac5cdccef7d1d1933309dfad580f2 188 Pfam PF09335 SNARE associated Golgi protein 45 144 1.0E-11 T 11-10-2018 IPR032816 SNARE associated Golgi protein DB34_01560 bca34481e6004da0e86f83b278b90944 783 Pfam PF00593 TonB dependent receptor 274 779 2.5E-24 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel DB34_01560 bca34481e6004da0e86f83b278b90944 783 Gene3D G3DSA:2.40.170.20 194 783 2.1E-51 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DB34_01560 bca34481e6004da0e86f83b278b90944 783 Gene3D G3DSA:2.170.130.10 44 176 7.3E-6 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily DB34_01560 bca34481e6004da0e86f83b278b90944 783 Pfam PF07715 TonB-dependent Receptor Plug Domain 73 168 7.3E-8 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain DB34_01560 bca34481e6004da0e86f83b278b90944 783 SUPERFAMILY SSF56935 70 783 1.79E-69 T 11-10-2018 DB34_07750 8e33965fbf1ee82055e995bf0a930d0f 284 SUPERFAMILY SSF51430 1 274 1.28E-76 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DB34_07750 8e33965fbf1ee82055e995bf0a930d0f 284 PRINTS PR00069 Aldo-keto reductase signature 206 230 7.1E-14 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DB34_07750 8e33965fbf1ee82055e995bf0a930d0f 284 PRINTS PR00069 Aldo-keto reductase signature 96 114 7.1E-14 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DB34_07750 8e33965fbf1ee82055e995bf0a930d0f 284 PRINTS PR00069 Aldo-keto reductase signature 40 64 7.1E-14 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DB34_07750 8e33965fbf1ee82055e995bf0a930d0f 284 PRINTS PR00069 Aldo-keto reductase signature 126 143 7.1E-14 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DB34_07750 8e33965fbf1ee82055e995bf0a930d0f 284 Pfam PF00248 Aldo/keto reductase family 16 270 1.0E-51 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain DB34_07750 8e33965fbf1ee82055e995bf0a930d0f 284 PIRSF PIRSF000097 1 121 1.1E-18 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DB34_07750 8e33965fbf1ee82055e995bf0a930d0f 284 PIRSF PIRSF000097 114 272 1.0E-18 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DB34_07750 8e33965fbf1ee82055e995bf0a930d0f 284 Gene3D G3DSA:3.20.20.100 1 284 2.2E-92 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DB34_03350 fe4580ee4ce1420bfe8f85450cd13bd3 270 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 213 229 1.7E-10 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DB34_03350 fe4580ee4ce1420bfe8f85450cd13bd3 270 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 229 244 1.7E-10 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DB34_03350 fe4580ee4ce1420bfe8f85450cd13bd3 270 Gene3D G3DSA:2.60.120.10 64 180 2.8E-34 T 11-10-2018 IPR014710 RmlC-like jelly roll fold DB34_03350 fe4580ee4ce1420bfe8f85450cd13bd3 270 ProSitePatterns PS00042 Crp-type HTH domain signature. 215 238 - T 11-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 DB34_03350 fe4580ee4ce1420bfe8f85450cd13bd3 270 Pfam PF13545 Crp-like helix-turn-helix domain 184 263 8.1E-17 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DB34_03350 fe4580ee4ce1420bfe8f85450cd13bd3 270 SMART SM00419 207 256 6.5E-11 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DB34_03350 fe4580ee4ce1420bfe8f85450cd13bd3 270 SUPERFAMILY SSF51206 42 179 1.13E-27 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like DB34_03350 fe4580ee4ce1420bfe8f85450cd13bd3 270 Pfam PF00027 Cyclic nucleotide-binding domain 69 152 4.9E-10 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain DB34_03350 fe4580ee4ce1420bfe8f85450cd13bd3 270 SMART SM00100 49 167 2.7E-13 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain DB34_03350 fe4580ee4ce1420bfe8f85450cd13bd3 270 SUPERFAMILY SSF46785 181 264 1.08E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB34_03350 fe4580ee4ce1420bfe8f85450cd13bd3 270 Gene3D G3DSA:1.10.10.10 181 267 6.1E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB34_11625 bad501be53382cac56a8a031917f6959 80 Gene3D G3DSA:1.10.260.40 15 80 2.4E-14 T 11-10-2018 DB34_11625 bad501be53382cac56a8a031917f6959 80 Pfam PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT 18 71 4.7E-10 T 11-10-2018 IPR031856 Putative bacterial antitoxin YdaS DB34_11625 bad501be53382cac56a8a031917f6959 80 SUPERFAMILY SSF47413 13 69 2.36E-5 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DB34_04065 68f697b59fbf354d6c3dd80e2220f590 209 Pfam PF00881 Nitroreductase family 38 186 1.6E-9 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 DB34_04065 68f697b59fbf354d6c3dd80e2220f590 209 Gene3D G3DSA:3.40.109.10 18 207 3.8E-26 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DB34_04065 68f697b59fbf354d6c3dd80e2220f590 209 SUPERFAMILY SSF55469 25 205 5.23E-36 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DB34_05065 be16a46edc6b39f25b983a87fb71ba9e 985 Pfam PF00535 Glycosyl transferase family 2 355 464 2.4E-12 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DB34_05065 be16a46edc6b39f25b983a87fb71ba9e 985 SUPERFAMILY SSF53448 350 593 3.94E-41 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB34_05065 be16a46edc6b39f25b983a87fb71ba9e 985 Pfam PF13692 Glycosyl transferases group 1 807 950 5.1E-26 T 11-10-2018 DB34_05065 be16a46edc6b39f25b983a87fb71ba9e 985 Gene3D G3DSA:3.40.50.2000 802 966 2.4E-17 T 11-10-2018 DB34_05065 be16a46edc6b39f25b983a87fb71ba9e 985 Gene3D G3DSA:3.90.550.10 342 569 1.1E-39 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB34_05065 be16a46edc6b39f25b983a87fb71ba9e 985 SUPERFAMILY SSF53756 615 983 5.76E-25 T 11-10-2018 DB34_01980 af568b8c030e9492feb71484f10a2027 533 PRINTS PR00097 Anthranilate synthase component II signature 94 105 6.1E-8 T 11-10-2018 DB34_01980 af568b8c030e9492feb71484f10a2027 533 PRINTS PR00097 Anthranilate synthase component II signature 185 198 6.1E-8 T 11-10-2018 DB34_01980 af568b8c030e9492feb71484f10a2027 533 PRINTS PR00097 Anthranilate synthase component II signature 67 76 6.1E-8 T 11-10-2018 DB34_01980 af568b8c030e9492feb71484f10a2027 533 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 23 212 5.6E-73 T 11-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 DB34_01980 af568b8c030e9492feb71484f10a2027 533 Gene3D G3DSA:3.40.50.880 20 218 2.1E-52 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like DB34_01980 af568b8c030e9492feb71484f10a2027 533 Pfam PF00117 Glutamine amidotransferase class-I 25 207 5.4E-36 T 11-10-2018 IPR017926 Glutamine amidotransferase DB34_01980 af568b8c030e9492feb71484f10a2027 533 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 20 533 53.994 T 11-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 DB34_01980 af568b8c030e9492feb71484f10a2027 533 SUPERFAMILY SSF52317 19 245 6.22E-56 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like DB34_01980 af568b8c030e9492feb71484f10a2027 533 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 222 533 1.2E-144 T 11-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 DB34_01980 af568b8c030e9492feb71484f10a2027 533 Gene3D G3DSA:3.30.300.10 414 533 4.4E-50 T 11-10-2018 DB34_01980 af568b8c030e9492feb71484f10a2027 533 Pfam PF02540 NAD synthase 233 262 1.1E-5 T 11-10-2018 IPR022310 NAD/GMP synthase DB34_01980 af568b8c030e9492feb71484f10a2027 533 PRINTS PR00096 Glutamine amidotransferase superfamily signature 94 105 3.6E-9 T 11-10-2018 DB34_01980 af568b8c030e9492feb71484f10a2027 533 PRINTS PR00096 Glutamine amidotransferase superfamily signature 185 198 3.6E-9 T 11-10-2018 DB34_01980 af568b8c030e9492feb71484f10a2027 533 PRINTS PR00096 Glutamine amidotransferase superfamily signature 67 76 3.6E-9 T 11-10-2018 DB34_01980 af568b8c030e9492feb71484f10a2027 533 SUPERFAMILY SSF52402 205 426 2.43E-59 T 11-10-2018 DB34_01980 af568b8c030e9492feb71484f10a2027 533 Gene3D G3DSA:3.40.50.620 219 413 1.5E-73 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DB34_01980 af568b8c030e9492feb71484f10a2027 533 Pfam PF00958 GMP synthase C terminal domain 441 532 1.2E-42 T 11-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 DB34_01980 af568b8c030e9492feb71484f10a2027 533 SUPERFAMILY SSF54810 413 533 1.27E-49 T 11-10-2018 DB34_09000 02aa9833fbf5765e6992fe41b55e6111 239 Pfam PF07729 FCD domain 99 218 2.1E-14 T 11-10-2018 IPR011711 GntR, C-terminal DB34_09000 02aa9833fbf5765e6992fe41b55e6111 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 28 87 5.2E-11 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB34_09000 02aa9833fbf5765e6992fe41b55e6111 239 SMART SM00345 29 87 2.2E-7 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB34_09000 02aa9833fbf5765e6992fe41b55e6111 239 SMART SM00895 97 222 6.2E-8 T 11-10-2018 IPR011711 GntR, C-terminal DB34_09000 02aa9833fbf5765e6992fe41b55e6111 239 Gene3D G3DSA:1.10.10.10 23 88 2.6E-13 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB34_09000 02aa9833fbf5765e6992fe41b55e6111 239 Gene3D G3DSA:1.20.120.530 94 228 6.1E-17 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DB34_09000 02aa9833fbf5765e6992fe41b55e6111 239 SUPERFAMILY SSF48008 96 229 4.45E-16 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DB34_09000 02aa9833fbf5765e6992fe41b55e6111 239 SUPERFAMILY SSF46785 24 91 1.61E-9 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB34_02005 b422906009d56fe846fffbe17a402084 530 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 14 525 4.6E-120 T 11-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 DB34_02005 b422906009d56fe846fffbe17a402084 530 Pfam PF02652 L-lactate permease 15 524 2.0E-123 T 11-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 DB34_07305 eea23ced758122342b5158508df0a237 391 Hamap MF_00296 Homoserine O-acetyltransferase [metXA]. 1 382 31.66 T 11-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 DB34_07305 eea23ced758122342b5158508df0a237 391 Pfam PF00561 alpha/beta hydrolase fold 48 369 1.0E-28 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DB34_07305 eea23ced758122342b5158508df0a237 391 SUPERFAMILY SSF53474 12 381 3.37E-98 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold DB34_07305 eea23ced758122342b5158508df0a237 391 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 19 381 3.6E-138 T 11-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 DB34_07305 eea23ced758122342b5158508df0a237 391 Gene3D G3DSA:3.40.50.1820 23 370 4.5E-135 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold DB34_07305 eea23ced758122342b5158508df0a237 391 PIRSF PIRSF000443 2 389 9.3E-135 T 11-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 DB34_07305 eea23ced758122342b5158508df0a237 391 Gene3D G3DSA:1.10.1740.110 187 300 4.5E-135 T 11-10-2018 DB34_02720 2e4121e8f01b9636e295f2c9a794ea37 414 TIGRFAM TIGR01579 MiaB-like-C: MiaB-like tRNA modifying enzyme 6 398 2.0E-123 T 11-10-2018 IPR006467 MiaB-like tRNA modifying enzyme GO:0016740 DB34_02720 2e4121e8f01b9636e295f2c9a794ea37 414 Pfam PF00919 Uncharacterized protein family UPF0004 6 82 6.7E-14 T 11-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 DB34_02720 2e4121e8f01b9636e295f2c9a794ea37 414 Gene3D G3DSA:3.40.50.12160 3 118 1.3E-12 T 11-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily DB34_02720 2e4121e8f01b9636e295f2c9a794ea37 414 Gene3D G3DSA:3.80.30.20 128 361 4.7E-70 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe DB34_02720 2e4121e8f01b9636e295f2c9a794ea37 414 SMART SM00729 130 348 8.2E-53 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DB34_02720 2e4121e8f01b9636e295f2c9a794ea37 414 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 134 154 - T 11-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 DB34_02720 2e4121e8f01b9636e295f2c9a794ea37 414 Pfam PF04055 Radical SAM superfamily 135 307 5.4E-23 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DB34_02720 2e4121e8f01b9636e295f2c9a794ea37 414 SUPERFAMILY SSF102114 110 353 1.83E-52 T 11-10-2018 DB34_02720 2e4121e8f01b9636e295f2c9a794ea37 414 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 5 404 1.0E-97 T 11-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 DB34_10430 25e8eeeb4807a0b69c5c2a082b2c6ac6 486 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 42 50 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 DB34_10430 25e8eeeb4807a0b69c5c2a082b2c6ac6 486 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 22 59 1.5E-4 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 DB34_10430 25e8eeeb4807a0b69c5c2a082b2c6ac6 486 SUPERFAMILY SSF56176 184 362 6.0E-46 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 DB34_10430 25e8eeeb4807a0b69c5c2a082b2c6ac6 486 Gene3D G3DSA:3.30.390.50 366 477 2.7E-28 T 11-10-2018 DB34_10430 25e8eeeb4807a0b69c5c2a082b2c6ac6 486 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 201 363 3.1E-43 T 11-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 DB34_10430 25e8eeeb4807a0b69c5c2a082b2c6ac6 486 Gene3D G3DSA:3.30.465.10 251 363 8.8E-32 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 DB34_10430 25e8eeeb4807a0b69c5c2a082b2c6ac6 486 SUPERFAMILY SSF54292 4 88 1.57E-18 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 DB34_10430 25e8eeeb4807a0b69c5c2a082b2c6ac6 486 Gene3D G3DSA:3.30.43.10 201 250 9.1E-22 T 11-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 DB34_10430 25e8eeeb4807a0b69c5c2a082b2c6ac6 486 SUPERFAMILY SSF47741 96 164 9.42E-31 T 11-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily DB34_10430 25e8eeeb4807a0b69c5c2a082b2c6ac6 486 SMART SM01092 371 473 1.2E-32 T 11-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal DB34_10430 25e8eeeb4807a0b69c5c2a082b2c6ac6 486 Pfam PF01799 [2Fe-2S] binding domain 84 157 5.9E-29 T 11-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 DB34_10430 25e8eeeb4807a0b69c5c2a082b2c6ac6 486 Gene3D G3DSA:3.10.20.30 1 87 1.6E-26 T 11-10-2018 IPR012675 Beta-grasp domain superfamily DB34_10430 25e8eeeb4807a0b69c5c2a082b2c6ac6 486 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 371 472 1.3E-31 T 11-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal DB34_10430 25e8eeeb4807a0b69c5c2a082b2c6ac6 486 PIRSF PIRSF036557 2 482 1.7E-181 T 11-10-2018 IPR012175 Xanthine dehydrogenase, small subunit, bacteria DB34_10430 25e8eeeb4807a0b69c5c2a082b2c6ac6 486 TIGRFAM TIGR02963 xanthine_xdhA: xanthine dehydrogenase, small subunit 5 473 8.3E-192 T 11-10-2018 IPR014307 Xanthine dehydrogenase, small subunit GO:0004854|GO:0004855|GO:0050660|GO:0055114 KEGG: 00230+1.17.1.4|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999|Reactome: R-HSA-74259|Reactome: R-HSA-8851680 DB34_10430 25e8eeeb4807a0b69c5c2a082b2c6ac6 486 SUPERFAMILY SSF55447 369 475 2.88E-31 T 11-10-2018 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily DB34_10430 25e8eeeb4807a0b69c5c2a082b2c6ac6 486 Gene3D G3DSA:1.10.150.120 88 197 1.2E-31 T 11-10-2018 DB34_11020 72df64c39c81e5274a4d0e8e9c5f37c6 397 Pfam PF00999 Sodium/hydrogen exchanger family 12 391 9.1E-28 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 DB34_11020 72df64c39c81e5274a4d0e8e9c5f37c6 397 Gene3D G3DSA:1.20.1530.20 2 396 1.0E-44 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily DB34_12990 d97877f3c8f01d265cbca3a514db4da6 437 SUPERFAMILY SSF52413 305 431 3.01E-36 T 11-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 DB34_12990 d97877f3c8f01d265cbca3a514db4da6 437 Gene3D G3DSA:3.40.50.720 1 201 8.3E-69 T 11-10-2018 DB34_12990 d97877f3c8f01d265cbca3a514db4da6 437 SUPERFAMILY SSF51735 2 207 6.96E-48 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily DB34_12990 d97877f3c8f01d265cbca3a514db4da6 437 Gene3D G3DSA:1.20.5.100 203 233 1.7E-17 T 11-10-2018 DB34_12990 d97877f3c8f01d265cbca3a514db4da6 437 SMART SM00984 319 421 5.8E-46 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DB34_12990 d97877f3c8f01d265cbca3a514db4da6 437 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 203 295 8.7E-36 T 11-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DB34_12990 d97877f3c8f01d265cbca3a514db4da6 437 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 2 174 6.3E-58 T 11-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DB34_12990 d97877f3c8f01d265cbca3a514db4da6 437 PIRSF PIRSF500134 1 437 2.8E-167 T 11-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 DB34_12990 d97877f3c8f01d265cbca3a514db4da6 437 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 2 417 8.7E-129 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 DB34_12990 d97877f3c8f01d265cbca3a514db4da6 437 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 319 421 8.0E-30 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DB34_12990 d97877f3c8f01d265cbca3a514db4da6 437 PIRSF PIRSF000124 1 436 9.4E-133 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 DB34_12990 d97877f3c8f01d265cbca3a514db4da6 437 Gene3D G3DSA:3.40.50.720 234 437 3.0E-70 T 11-10-2018 DB34_12990 d97877f3c8f01d265cbca3a514db4da6 437 SUPERFAMILY SSF48179 203 299 1.14E-31 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DB34_10120 96f52cd3cd60928c4f5e04269ae71d98 812 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 13 812 93.637 T 11-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DB34_10120 96f52cd3cd60928c4f5e04269ae71d98 812 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 43 185 5.7E-22 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB34_10120 96f52cd3cd60928c4f5e04269ae71d98 812 SUPERFAMILY SSF56719 407 803 8.63E-80 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 DB34_10120 96f52cd3cd60928c4f5e04269ae71d98 812 Gene3D G3DSA:3.40.50.670 411 590 3.1E-71 T 11-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DB34_10120 96f52cd3cd60928c4f5e04269ae71d98 812 Gene3D G3DSA:3.30.230.10 233 410 1.6E-59 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DB34_10120 96f52cd3cd60928c4f5e04269ae71d98 812 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 741 800 5.9E-25 T 11-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 DB34_10120 96f52cd3cd60928c4f5e04269ae71d98 812 SUPERFAMILY SSF55874 16 223 3.41E-67 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB34_10120 96f52cd3cd60928c4f5e04269ae71d98 812 Pfam PF01751 Toprim domain 432 548 6.2E-17 T 11-10-2018 IPR006171 TOPRIM domain DB34_10120 96f52cd3cd60928c4f5e04269ae71d98 812 SUPERFAMILY SSF54211 234 404 1.12E-49 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DB34_10120 96f52cd3cd60928c4f5e04269ae71d98 812 Gene3D G3DSA:3.30.565.10 12 232 7.8E-87 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB34_10120 96f52cd3cd60928c4f5e04269ae71d98 812 PRINTS PR01159 DNA gyrase subunit B signature 387 407 1.7E-71 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DB34_10120 96f52cd3cd60928c4f5e04269ae71d98 812 PRINTS PR01159 DNA gyrase subunit B signature 373 387 1.7E-71 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DB34_10120 96f52cd3cd60928c4f5e04269ae71d98 812 PRINTS PR01159 DNA gyrase subunit B signature 483 492 1.7E-71 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DB34_10120 96f52cd3cd60928c4f5e04269ae71d98 812 PRINTS PR01159 DNA gyrase subunit B signature 325 341 1.7E-71 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DB34_10120 96f52cd3cd60928c4f5e04269ae71d98 812 PRINTS PR01159 DNA gyrase subunit B signature 16 26 1.7E-71 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DB34_10120 96f52cd3cd60928c4f5e04269ae71d98 812 PRINTS PR01159 DNA gyrase subunit B signature 765 777 1.7E-71 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DB34_10120 96f52cd3cd60928c4f5e04269ae71d98 812 PRINTS PR01159 DNA gyrase subunit B signature 192 207 1.7E-71 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DB34_10120 96f52cd3cd60928c4f5e04269ae71d98 812 PRINTS PR01159 DNA gyrase subunit B signature 233 255 1.7E-71 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DB34_10120 96f52cd3cd60928c4f5e04269ae71d98 812 PRINTS PR01159 DNA gyrase subunit B signature 207 220 1.7E-71 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DB34_10120 96f52cd3cd60928c4f5e04269ae71d98 812 PRINTS PR01159 DNA gyrase subunit B signature 781 797 1.7E-71 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DB34_10120 96f52cd3cd60928c4f5e04269ae71d98 812 PRINTS PR01159 DNA gyrase subunit B signature 257 275 1.7E-71 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DB34_10120 96f52cd3cd60928c4f5e04269ae71d98 812 Gene3D G3DSA:3.40.50.670 711 810 1.1E-20 T 11-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DB34_10120 96f52cd3cd60928c4f5e04269ae71d98 812 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 16 812 1.3E-279 T 11-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DB34_10120 96f52cd3cd60928c4f5e04269ae71d98 812 ProSitePatterns PS00177 DNA topoisomerase II signature. 435 443 - T 11-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DB34_10120 96f52cd3cd60928c4f5e04269ae71d98 812 Pfam PF00204 DNA gyrase B 234 403 2.8E-50 T 11-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DB34_10120 96f52cd3cd60928c4f5e04269ae71d98 812 SMART SM00433 46 609 4.4E-245 T 11-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DB34_10120 96f52cd3cd60928c4f5e04269ae71d98 812 PRINTS PR00418 DNA topoisomerase II family signature 81 94 4.5E-67 T 11-10-2018 DB34_10120 96f52cd3cd60928c4f5e04269ae71d98 812 PRINTS PR00418 DNA topoisomerase II family signature 543 555 4.5E-67 T 11-10-2018 DB34_10120 96f52cd3cd60928c4f5e04269ae71d98 812 PRINTS PR00418 DNA topoisomerase II family signature 283 296 4.5E-67 T 11-10-2018 DB34_10120 96f52cd3cd60928c4f5e04269ae71d98 812 PRINTS PR00418 DNA topoisomerase II family signature 744 760 4.5E-67 T 11-10-2018 DB34_10120 96f52cd3cd60928c4f5e04269ae71d98 812 PRINTS PR00418 DNA topoisomerase II family signature 433 447 4.5E-67 T 11-10-2018 DB34_10120 96f52cd3cd60928c4f5e04269ae71d98 812 PRINTS PR00418 DNA topoisomerase II family signature 505 521 4.5E-67 T 11-10-2018 DB34_10120 96f52cd3cd60928c4f5e04269ae71d98 812 PRINTS PR00418 DNA topoisomerase II family signature 46 61 4.5E-67 T 11-10-2018 DB34_10120 96f52cd3cd60928c4f5e04269ae71d98 812 PRINTS PR00418 DNA topoisomerase II family signature 124 138 4.5E-67 T 11-10-2018 DB34_10120 96f52cd3cd60928c4f5e04269ae71d98 812 PRINTS PR00418 DNA topoisomerase II family signature 523 540 4.5E-67 T 11-10-2018 DB34_10120 96f52cd3cd60928c4f5e04269ae71d98 812 SMART SM00387 42 187 1.2E-27 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB34_07915 fbcce3f7a8e1092446b43db395a6955c 213 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 14 209 19.848 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 DB34_07915 fbcce3f7a8e1092446b43db395a6955c 213 SMART SM01207 17 201 4.0E-79 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 DB34_07915 fbcce3f7a8e1092446b43db395a6955c 213 Pfam PF02660 Glycerol-3-phosphate acyltransferase 18 200 3.0E-49 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 DB34_07915 fbcce3f7a8e1092446b43db395a6955c 213 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 11 210 3.6E-54 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 DB34_04955 a63a3fd47abea572f66ea02beca79e0b 275 Pfam PF00226 DnaJ domain 210 271 1.7E-7 T 11-10-2018 IPR001623 DnaJ domain DB34_04955 a63a3fd47abea572f66ea02beca79e0b 275 Pfam PF05099 Tellurite resistance protein TerB 78 198 5.8E-25 T 11-10-2018 IPR007791 Co-chaperone DjlA, N-terminal DB34_04955 a63a3fd47abea572f66ea02beca79e0b 275 SMART SM00271 209 274 1.7E-8 T 11-10-2018 IPR001623 DnaJ domain DB34_04955 a63a3fd47abea572f66ea02beca79e0b 275 Gene3D G3DSA:1.10.3680.10 60 194 8.0E-8 T 11-10-2018 IPR029024 TerB-like DB34_04955 a63a3fd47abea572f66ea02beca79e0b 275 SUPERFAMILY SSF158682 5 224 9.81E-12 T 11-10-2018 IPR029024 TerB-like DB34_04955 a63a3fd47abea572f66ea02beca79e0b 275 Gene3D G3DSA:1.10.287.110 196 273 3.1E-10 T 11-10-2018 IPR036869 Chaperone J-domain superfamily DB34_04955 a63a3fd47abea572f66ea02beca79e0b 275 SUPERFAMILY SSF46565 168 272 1.31E-13 T 11-10-2018 IPR036869 Chaperone J-domain superfamily DB34_12720 9f1bb0c86766e1a056470b010bc07e95 467 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 448 32.589 T 11-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 DB34_12720 9f1bb0c86766e1a056470b010bc07e95 467 Gene3D G3DSA:1.20.120.140 5 307 1.2E-112 T 11-10-2018 DB34_12720 9f1bb0c86766e1a056470b010bc07e95 467 Pfam PF02978 Signal peptide binding domain 328 428 3.3E-32 T 11-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 DB34_12720 9f1bb0c86766e1a056470b010bc07e95 467 SMART SM00382 100 302 4.1E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_12720 9f1bb0c86766e1a056470b010bc07e95 467 Pfam PF00448 SRP54-type protein, GTPase domain 104 297 4.9E-68 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DB34_12720 9f1bb0c86766e1a056470b010bc07e95 467 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 430 1.5E-176 T 11-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 DB34_12720 9f1bb0c86766e1a056470b010bc07e95 467 SMART SM00963 1 86 2.1E-28 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DB34_12720 9f1bb0c86766e1a056470b010bc07e95 467 SMART SM00962 101 297 1.8E-105 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DB34_12720 9f1bb0c86766e1a056470b010bc07e95 467 SUPERFAMILY SSF52540 42 355 2.23E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_12720 9f1bb0c86766e1a056470b010bc07e95 467 Gene3D G3DSA:3.40.50.300 90 286 1.2E-112 T 11-10-2018 DB34_12720 9f1bb0c86766e1a056470b010bc07e95 467 SUPERFAMILY SSF47446 328 429 9.16E-35 T 11-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 DB34_12720 9f1bb0c86766e1a056470b010bc07e95 467 Gene3D G3DSA:1.10.260.30 312 444 9.4E-41 T 11-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 DB34_12720 9f1bb0c86766e1a056470b010bc07e95 467 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 4.8E-18 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DB34_09785 bb698be80a3c5de7ded69c60ca51ec01 220 SUPERFAMILY SSF52402 10 182 1.26E-37 T 11-10-2018 DB34_09785 bb698be80a3c5de7ded69c60ca51ec01 220 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 27 194 4.1E-33 T 11-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 DB34_09785 bb698be80a3c5de7ded69c60ca51ec01 220 Gene3D G3DSA:3.40.50.620 2 220 5.1E-54 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DB34_09785 bb698be80a3c5de7ded69c60ca51ec01 220 PIRSF PIRSF000857 4 220 4.4E-68 T 11-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 DB34_04165 ea752374f82bb18976a664dc1d94027f 137 Gene3D G3DSA:1.20.1300.10 20 132 9.7E-25 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DB34_04165 ea752374f82bb18976a664dc1d94027f 137 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 25 127 1.3E-20 T 11-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 DB34_04165 ea752374f82bb18976a664dc1d94027f 137 SUPERFAMILY SSF81343 19 127 7.41E-23 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DB34_04165 ea752374f82bb18976a664dc1d94027f 137 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 14 111 1.6E-13 T 11-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DB34_10735 3ce543ac7e4f32c1c36248b503c79316 383 Gene3D G3DSA:1.20.140.10 240 379 8.2E-21 T 11-10-2018 DB34_10735 3ce543ac7e4f32c1c36248b503c79316 383 Gene3D G3DSA:2.40.110.10 131 222 2.5E-23 T 11-10-2018 DB34_10735 3ce543ac7e4f32c1c36248b503c79316 383 PIRSF PIRSF016578 2 105 1.7E-6 T 11-10-2018 DB34_10735 3ce543ac7e4f32c1c36248b503c79316 383 PIRSF PIRSF016578 124 383 6.3E-25 T 11-10-2018 DB34_10735 3ce543ac7e4f32c1c36248b503c79316 383 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 214 1.5E-12 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 DB34_10735 3ce543ac7e4f32c1c36248b503c79316 383 Gene3D G3DSA:1.10.540.10 2 112 7.7E-15 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 DB34_10735 3ce543ac7e4f32c1c36248b503c79316 383 SUPERFAMILY SSF56645 15 222 6.54E-37 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 DB34_10735 3ce543ac7e4f32c1c36248b503c79316 383 SUPERFAMILY SSF47203 244 382 1.77E-17 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 DB34_10735 3ce543ac7e4f32c1c36248b503c79316 383 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 247 369 4.5E-13 T 11-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain DB34_07880 84afc1f7a1fd96f34deb0bd28215433b 328 Gene3D G3DSA:3.40.50.1100 64 166 4.5E-117 T 11-10-2018 DB34_07880 84afc1f7a1fd96f34deb0bd28215433b 328 SUPERFAMILY SSF53686 20 325 2.1E-95 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DB34_07880 84afc1f7a1fd96f34deb0bd28215433b 328 TIGRFAM TIGR01139 cysK: cysteine synthase A 26 325 1.5E-121 T 11-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 DB34_07880 84afc1f7a1fd96f34deb0bd28215433b 328 Gene3D G3DSA:3.40.50.1100 27 320 4.5E-117 T 11-10-2018 DB34_07880 84afc1f7a1fd96f34deb0bd28215433b 328 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 27 312 2.0E-68 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme DB34_07880 84afc1f7a1fd96f34deb0bd28215433b 328 TIGRFAM TIGR01136 cysKM: cysteine synthase 25 325 1.5E-117 T 11-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 DB34_05415 f2fb34151997eff4dbdafd348b89b11b 384 SUPERFAMILY SSF144083 315 378 1.23E-20 T 11-10-2018 DB34_05415 f2fb34151997eff4dbdafd348b89b11b 384 SUPERFAMILY SSF143865 8 317 1.44E-27 T 11-10-2018 DB34_05415 f2fb34151997eff4dbdafd348b89b11b 384 Gene3D G3DSA:1.20.58.340 304 380 3.2E-26 T 11-10-2018 DB34_05415 f2fb34151997eff4dbdafd348b89b11b 384 Pfam PF01544 CorA-like Mg2+ transporter protein 276 376 6.2E-31 T 11-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 DB34_05415 f2fb34151997eff4dbdafd348b89b11b 384 Pfam PF01544 CorA-like Mg2+ transporter protein 14 204 7.4E-12 T 11-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 DB34_05415 f2fb34151997eff4dbdafd348b89b11b 384 Gene3D G3DSA:3.30.460.20 4 114 4.4E-6 T 11-10-2018 DB34_08355 3f79140758016501df76acdae2e4398a 360 Pfam PF02769 AIR synthase related protein, C-terminal domain 182 342 7.2E-35 T 11-10-2018 IPR010918 PurM-like, C-terminal domain DB34_08355 3f79140758016501df76acdae2e4398a 360 Pfam PF00586 AIR synthase related protein, N-terminal domain 66 163 4.4E-15 T 11-10-2018 IPR016188 PurM-like, N-terminal domain DB34_08355 3f79140758016501df76acdae2e4398a 360 SUPERFAMILY SSF55326 12 175 3.29E-48 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily DB34_08355 3f79140758016501df76acdae2e4398a 360 SUPERFAMILY SSF56042 178 340 4.19E-56 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily DB34_08355 3f79140758016501df76acdae2e4398a 360 Gene3D G3DSA:3.90.650.10 178 354 2.7E-65 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily DB34_08355 3f79140758016501df76acdae2e4398a 360 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 12 339 2.9E-127 T 11-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DB34_08355 3f79140758016501df76acdae2e4398a 360 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 12 349 43.288 T 11-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DB34_08355 3f79140758016501df76acdae2e4398a 360 Gene3D G3DSA:3.30.1330.10 11 176 4.6E-65 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily DB34_01630 4d51eafb5593cb68654da195657bf3a9 369 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 1 339 2.2E-88 T 11-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 DB34_01630 4d51eafb5593cb68654da195657bf3a9 369 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 1 349 35.012 T 11-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 DB34_01630 4d51eafb5593cb68654da195657bf3a9 369 SUPERFAMILY SSF53067 8 310 2.07E-18 T 11-10-2018 DB34_01630 4d51eafb5593cb68654da195657bf3a9 369 Gene3D G3DSA:3.30.420.40 134 309 1.1E-106 T 11-10-2018 DB34_01630 4d51eafb5593cb68654da195657bf3a9 369 Gene3D G3DSA:3.30.420.40 1 340 1.1E-106 T 11-10-2018 DB34_00560 42f065c173ddf89e21cdfcfc1f165ae8 343 Pfam PF06258 Mitochondrial fission ELM1 34 341 1.8E-79 T 11-10-2018 IPR009367 Mitochondrial fission protein ELM1-like DB34_02975 fef188b4609bc114753c0918970633ca 197 Gene3D G3DSA:2.40.40.10 66 159 8.1E-36 T 11-10-2018 IPR036908 RlpA-like domain superfamily DB34_02975 fef188b4609bc114753c0918970633ca 197 SUPERFAMILY SSF50685 67 155 1.26E-10 T 11-10-2018 IPR036908 RlpA-like domain superfamily DB34_02975 fef188b4609bc114753c0918970633ca 197 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 20 159 22.965 T 11-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 DB34_02975 fef188b4609bc114753c0918970633ca 197 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 69 158 3.9E-36 T 11-10-2018 IPR012997 Rare lipoprotein A DB34_02975 fef188b4609bc114753c0918970633ca 197 Pfam PF03330 Lytic transglycolase 68 156 4.7E-25 T 11-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain DB34_07125 0cdc9624fedea52fd603465d937ea20d 321 SUPERFAMILY SSF160240 211 289 1.44E-21 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 DB34_07125 0cdc9624fedea52fd603465d937ea20d 321 SUPERFAMILY SSF161111 11 210 7.06E-47 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily DB34_07125 0cdc9624fedea52fd603465d937ea20d 321 Gene3D G3DSA:1.20.1510.10 11 207 1.5E-45 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily DB34_07125 0cdc9624fedea52fd603465d937ea20d 321 Pfam PF16916 Dimerisation domain of Zinc Transporter 213 289 1.6E-21 T 11-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain DB34_07125 0cdc9624fedea52fd603465d937ea20d 321 Gene3D G3DSA:3.30.70.1350 208 297 1.7E-27 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 DB34_07125 0cdc9624fedea52fd603465d937ea20d 321 Pfam PF01545 Cation efflux family 15 208 1.3E-33 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 DB34_07125 0cdc9624fedea52fd603465d937ea20d 321 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 13 290 2.5E-62 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 DB34_09345 f63f081d37423339300cc3fdb65c34ab 252 Gene3D G3DSA:3.20.20.190 89 252 2.1E-9 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 DB34_12755 6e26c47c21f926810fe98e5da9657532 305 Gene3D G3DSA:1.20.120.1780 187 305 4.1E-14 T 11-10-2018 DB34_12755 6e26c47c21f926810fe98e5da9657532 305 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 23 302 7.9E-99 T 11-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 DB34_12755 6e26c47c21f926810fe98e5da9657532 305 Pfam PF01040 UbiA prenyltransferase family 42 284 7.3E-54 T 11-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 DB34_12755 6e26c47c21f926810fe98e5da9657532 305 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 82 104 - T 11-10-2018 IPR030470 UbiA prenyltransferase conserved site DB34_12755 6e26c47c21f926810fe98e5da9657532 305 Gene3D G3DSA:1.10.357.140 21 186 1.8E-43 T 11-10-2018 DB34_12755 6e26c47c21f926810fe98e5da9657532 305 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 18 303 25.97 T 11-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 DB34_12090 b3ba83b3dddccbf39496b869a3533fe9 303 Gene3D G3DSA:3.40.50.720 18 295 2.7E-89 T 11-10-2018 DB34_12090 b3ba83b3dddccbf39496b869a3533fe9 303 SUPERFAMILY SSF51735 100 280 2.01E-43 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily DB34_12090 b3ba83b3dddccbf39496b869a3533fe9 303 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 106 279 9.0E-43 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 DB34_12090 b3ba83b3dddccbf39496b869a3533fe9 303 Gene3D G3DSA:3.40.50.720 97 280 2.7E-89 T 11-10-2018 DB34_12090 b3ba83b3dddccbf39496b869a3533fe9 303 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 141 168 - T 11-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 DB34_08340 91b3fa42256bbca7ef72fc59090d5a87 225 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 36 50 - T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 DB34_08340 91b3fa42256bbca7ef72fc59090d5a87 225 PIRSF PIRSF001461 4 225 2.5E-92 T 11-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 DB34_08340 91b3fa42256bbca7ef72fc59090d5a87 225 Pfam PF00834 Ribulose-phosphate 3 epimerase family 9 205 2.8E-80 T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 DB34_08340 91b3fa42256bbca7ef72fc59090d5a87 225 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 8 218 1.0E-88 T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 DB34_08340 91b3fa42256bbca7ef72fc59090d5a87 225 Gene3D G3DSA:3.20.20.70 4 222 3.0E-83 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB34_08340 91b3fa42256bbca7ef72fc59090d5a87 225 SUPERFAMILY SSF51366 6 218 8.9E-76 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 DB34_08340 91b3fa42256bbca7ef72fc59090d5a87 225 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 138 160 - T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 DB34_05525 ac8044ed7199601f9703ee64c2f165f0 325 SUPERFAMILY SSF101386 200 298 9.65E-24 T 11-10-2018 DB34_05525 ac8044ed7199601f9703ee64c2f165f0 325 TIGRFAM TIGR00444 mazG: MazG family protein 56 319 6.2E-89 T 11-10-2018 IPR011551 NTP pyrophosphohydrolase MazG DB34_05525 ac8044ed7199601f9703ee64c2f165f0 325 SUPERFAMILY SSF101386 48 148 3.63E-23 T 11-10-2018 DB34_05525 ac8044ed7199601f9703ee64c2f165f0 325 Gene3D G3DSA:1.10.287.1080 46 181 1.6E-43 T 11-10-2018 DB34_05525 ac8044ed7199601f9703ee64c2f165f0 325 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 73 146 1.9E-26 T 11-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core DB34_05525 ac8044ed7199601f9703ee64c2f165f0 325 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 230 289 1.8E-9 T 11-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core DB34_05525 ac8044ed7199601f9703ee64c2f165f0 325 Gene3D G3DSA:1.10.287.1080 194 324 2.3E-43 T 11-10-2018 DB34_02275 de0fe53b37c793893ab84c20e5fc17ed 270 Hamap MF_01384 Urease accessory protein UreD [ureD]. 7 262 22.176 T 11-10-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 DB34_02275 de0fe53b37c793893ab84c20e5fc17ed 270 Pfam PF01774 UreD urease accessory protein 47 250 9.4E-41 T 11-10-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 DB34_09115 809a1b29291762feae917e3c2648ad72 158 SUPERFAMILY SSF54292 2 77 2.75E-27 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 DB34_09115 809a1b29291762feae917e3c2648ad72 158 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 38 46 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 DB34_09115 809a1b29291762feae917e3c2648ad72 158 Gene3D G3DSA:3.10.20.30 1 75 1.2E-28 T 11-10-2018 IPR012675 Beta-grasp domain superfamily DB34_09115 809a1b29291762feae917e3c2648ad72 158 Pfam PF01799 [2Fe-2S] binding domain 72 144 6.2E-24 T 11-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 DB34_09115 809a1b29291762feae917e3c2648ad72 158 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 5 53 8.9E-9 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 DB34_09115 809a1b29291762feae917e3c2648ad72 158 SUPERFAMILY SSF47741 72 152 2.75E-30 T 11-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily DB34_09115 809a1b29291762feae917e3c2648ad72 158 Gene3D G3DSA:1.10.150.120 77 158 1.6E-23 T 11-10-2018 DB34_03750 3882b1b6cbe0d9725e72da4a109fe834 939 Gene3D G3DSA:3.40.50.2000 535 749 1.2E-12 T 11-10-2018 DB34_03750 3882b1b6cbe0d9725e72da4a109fe834 939 SUPERFAMILY SSF53756 539 908 7.18E-43 T 11-10-2018 DB34_03750 3882b1b6cbe0d9725e72da4a109fe834 939 Pfam PF13692 Glycosyl transferases group 1 377 491 1.1E-10 T 11-10-2018 DB34_03750 3882b1b6cbe0d9725e72da4a109fe834 939 Pfam PF13579 Glycosyl transferase 4-like domain 550 744 1.1E-19 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 DB34_03750 3882b1b6cbe0d9725e72da4a109fe834 939 SUPERFAMILY SSF53756 283 518 2.83E-19 T 11-10-2018 DB34_03750 3882b1b6cbe0d9725e72da4a109fe834 939 Gene3D G3DSA:3.40.50.2000 344 506 9.3E-16 T 11-10-2018 DB34_03750 3882b1b6cbe0d9725e72da4a109fe834 939 Gene3D G3DSA:3.40.50.2000 750 915 2.4E-19 T 11-10-2018 DB34_03750 3882b1b6cbe0d9725e72da4a109fe834 939 Pfam PF00534 Glycosyl transferases group 1 758 909 8.4E-18 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 DB34_02535 74423719bdd7ae7eef1699e66fe05e13 305 Gene3D G3DSA:1.10.10.10 4 90 4.4E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB34_02535 74423719bdd7ae7eef1699e66fe05e13 305 SUPERFAMILY SSF46785 5 113 3.76E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB34_02535 74423719bdd7ae7eef1699e66fe05e13 305 Pfam PF03466 LysR substrate binding domain 89 292 4.4E-45 T 11-10-2018 IPR005119 LysR, substrate-binding DB34_02535 74423719bdd7ae7eef1699e66fe05e13 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 8.7E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB34_02535 74423719bdd7ae7eef1699e66fe05e13 305 SUPERFAMILY SSF53850 90 299 7.45E-46 T 11-10-2018 DB34_02535 74423719bdd7ae7eef1699e66fe05e13 305 Gene3D G3DSA:3.40.190.10 92 292 1.5E-68 T 11-10-2018 DB34_02535 74423719bdd7ae7eef1699e66fe05e13 305 Gene3D G3DSA:3.40.190.10 164 266 1.5E-68 T 11-10-2018 DB34_02815 d315623fee379fe8df391dcb61a0c86d 510 Gene3D G3DSA:2.40.10.120 46 285 1.5E-86 T 11-10-2018 DB34_02815 d315623fee379fe8df391dcb61a0c86d 510 Gene3D G3DSA:2.30.42.10 287 388 1.7E-23 T 11-10-2018 DB34_02815 d315623fee379fe8df391dcb61a0c86d 510 SUPERFAMILY SSF50156 250 374 1.05E-23 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 DB34_02815 d315623fee379fe8df391dcb61a0c86d 510 Pfam PF13365 Trypsin-like peptidase domain 119 253 4.4E-35 T 11-10-2018 DB34_02815 d315623fee379fe8df391dcb61a0c86d 510 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 48 491 6.3E-151 T 11-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 DB34_02815 d315623fee379fe8df391dcb61a0c86d 510 SMART SM00228 292 373 1.7E-10 T 11-10-2018 IPR001478 PDZ domain GO:0005515 DB34_02815 d315623fee379fe8df391dcb61a0c86d 510 SMART SM00228 409 494 3.8E-7 T 11-10-2018 IPR001478 PDZ domain GO:0005515 DB34_02815 d315623fee379fe8df391dcb61a0c86d 510 SUPERFAMILY SSF50494 46 289 2.06E-68 T 11-10-2018 IPR009003 Peptidase S1, PA clan DB34_02815 d315623fee379fe8df391dcb61a0c86d 510 Gene3D G3DSA:2.30.42.10 415 500 7.4E-15 T 11-10-2018 DB34_02815 d315623fee379fe8df391dcb61a0c86d 510 Pfam PF13180 PDZ domain 292 381 1.4E-11 T 11-10-2018 IPR001478 PDZ domain GO:0005515 DB34_02815 d315623fee379fe8df391dcb61a0c86d 510 Pfam PF13180 PDZ domain 431 485 3.3E-9 T 11-10-2018 IPR001478 PDZ domain GO:0005515 DB34_02815 d315623fee379fe8df391dcb61a0c86d 510 PRINTS PR00834 HtrA/DegQ protease family signature 149 169 1.1E-52 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DB34_02815 d315623fee379fe8df391dcb61a0c86d 510 PRINTS PR00834 HtrA/DegQ protease family signature 246 263 1.1E-52 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DB34_02815 d315623fee379fe8df391dcb61a0c86d 510 PRINTS PR00834 HtrA/DegQ protease family signature 332 344 1.1E-52 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DB34_02815 d315623fee379fe8df391dcb61a0c86d 510 PRINTS PR00834 HtrA/DegQ protease family signature 190 214 1.1E-52 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DB34_02815 d315623fee379fe8df391dcb61a0c86d 510 PRINTS PR00834 HtrA/DegQ protease family signature 224 241 1.1E-52 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DB34_02815 d315623fee379fe8df391dcb61a0c86d 510 PRINTS PR00834 HtrA/DegQ protease family signature 128 140 1.1E-52 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DB34_02815 d315623fee379fe8df391dcb61a0c86d 510 SUPERFAMILY SSF50156 412 499 7.62E-13 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 DB34_04690 1c46bc8774aecafc811577860cc6dbd2 350 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 309 324 3.2E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DB34_04690 1c46bc8774aecafc811577860cc6dbd2 350 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 324 340 3.2E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DB34_04690 1c46bc8774aecafc811577860cc6dbd2 350 Pfam PF12833 Helix-turn-helix domain 264 342 7.2E-16 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB34_04690 1c46bc8774aecafc811577860cc6dbd2 350 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 28 209 1.3E-43 T 11-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal DB34_04690 1c46bc8774aecafc811577860cc6dbd2 350 SUPERFAMILY SSF46689 294 344 2.72E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB34_04690 1c46bc8774aecafc811577860cc6dbd2 350 SMART SM00342 260 340 5.2E-18 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB34_04690 1c46bc8774aecafc811577860cc6dbd2 350 Gene3D G3DSA:1.10.10.60 242 344 3.1E-21 T 11-10-2018 DB34_05455 1094df3ec9a78d698c24fbd2b6108f97 435 SUPERFAMILY SSF55874 234 417 9.69E-38 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB34_05455 1094df3ec9a78d698c24fbd2b6108f97 435 Gene3D G3DSA:3.30.565.10 251 418 1.4E-36 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB34_05455 1094df3ec9a78d698c24fbd2b6108f97 435 Gene3D G3DSA:1.10.287.130 173 245 6.5E-20 T 11-10-2018 DB34_05455 1094df3ec9a78d698c24fbd2b6108f97 435 SMART SM00387 292 419 9.3E-33 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB34_05455 1094df3ec9a78d698c24fbd2b6108f97 435 PRINTS PR00344 Bacterial sensor protein C-terminal signature 345 359 3.2E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB34_05455 1094df3ec9a78d698c24fbd2b6108f97 435 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 416 3.2E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB34_05455 1094df3ec9a78d698c24fbd2b6108f97 435 PRINTS PR00344 Bacterial sensor protein C-terminal signature 379 397 3.2E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB34_05455 1094df3ec9a78d698c24fbd2b6108f97 435 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 292 417 7.6E-23 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB34_05455 1094df3ec9a78d698c24fbd2b6108f97 435 Pfam PF00512 His Kinase A (phospho-acceptor) domain 180 243 8.7E-17 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DB34_05455 1094df3ec9a78d698c24fbd2b6108f97 435 SMART SM00388 178 245 8.4E-19 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DB34_05455 1094df3ec9a78d698c24fbd2b6108f97 435 SUPERFAMILY SSF47384 170 243 5.89E-17 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DB34_09695 c788c63b3eccfd69c151594db23f8035 288 Pfam PF05036 Sporulation related domain 234 277 5.5E-6 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 DB34_09695 c788c63b3eccfd69c151594db23f8035 288 Gene3D G3DSA:2.40.40.10 52 141 9.5E-18 T 11-10-2018 IPR036908 RlpA-like domain superfamily DB34_09695 c788c63b3eccfd69c151594db23f8035 288 Pfam PF03330 Lytic transglycolase 64 130 1.0E-9 T 11-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain DB34_09695 c788c63b3eccfd69c151594db23f8035 288 SUPERFAMILY SSF110997 236 286 4.71E-5 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 DB34_09695 c788c63b3eccfd69c151594db23f8035 288 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 5 142 16.891 T 11-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 DB34_01390 0c4596c771601466f9c8b41e734e4d78 364 SUPERFAMILY SSF102114 6 313 5.76E-72 T 11-10-2018 DB34_01390 0c4596c771601466f9c8b41e734e4d78 364 Pfam PF04055 Radical SAM superfamily 14 157 7.5E-21 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DB34_01390 0c4596c771601466f9c8b41e734e4d78 364 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 14 25 - T 11-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DB34_01390 0c4596c771601466f9c8b41e734e4d78 364 Pfam PF13186 Iron-sulfur cluster-binding domain 238 303 6.0E-8 T 11-10-2018 IPR023885 4Fe4S-binding SPASM domain DB34_01390 0c4596c771601466f9c8b41e734e4d78 364 PIRSF PIRSF037420 1 350 2.1E-117 T 11-10-2018 IPR017200 Coenzyme PQQ synthesis protein E DB34_01390 0c4596c771601466f9c8b41e734e4d78 364 Pfam PF13353 4Fe-4S single cluster domain 15 97 4.5E-7 T 11-10-2018 DB34_01390 0c4596c771601466f9c8b41e734e4d78 364 TIGRFAM TIGR02109 PQQ_syn_pqqE: coenzyme PQQ biosynthesis enzyme PqqE 5 351 1.2E-169 T 11-10-2018 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 DB34_01390 0c4596c771601466f9c8b41e734e4d78 364 Hamap MF_00660 Coenzyme PQQ synthesis protein E [pqqE]. 1 364 178.945 T 11-10-2018 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 DB34_01390 0c4596c771601466f9c8b41e734e4d78 364 Gene3D G3DSA:3.20.20.70 6 285 3.7E-47 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB34_01390 0c4596c771601466f9c8b41e734e4d78 364 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 241 331 2.4E-8 T 11-10-2018 IPR023885 4Fe4S-binding SPASM domain DB34_05055 a2c10de1cdc803b690eb37d712474c89 448 SUPERFAMILY SSF53756 2 445 4.6E-142 T 11-10-2018 DB34_05055 a2c10de1cdc803b690eb37d712474c89 448 Gene3D G3DSA:3.40.50.2000 220 428 2.1E-149 T 11-10-2018 DB34_05055 a2c10de1cdc803b690eb37d712474c89 448 Gene3D G3DSA:3.40.50.2000 21 439 2.1E-149 T 11-10-2018 DB34_05055 a2c10de1cdc803b690eb37d712474c89 448 Pfam PF00982 Glycosyltransferase family 20 18 443 4.8E-127 T 11-10-2018 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 KEGG: 00500+2.4.1.15 DB34_06685 661a1935b39c0e8a738ba0ebe6304a7e 489 Pfam PF13403 Hint domain 148 287 6.7E-39 T 11-10-2018 IPR028992 Hedgehog/Intein (Hint) domain DB34_06685 661a1935b39c0e8a738ba0ebe6304a7e 489 SUPERFAMILY SSF51294 149 284 7.85E-9 T 11-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 DB34_09845 45ff91fb00b12013e219843e2648a1eb 410 Gene3D G3DSA:3.40.47.10 1 255 9.1E-86 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 DB34_09845 45ff91fb00b12013e219843e2648a1eb 410 PIRSF PIRSF000447 1 410 2.3E-177 T 11-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 DB34_09845 45ff91fb00b12013e219843e2648a1eb 410 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 254 367 5.8E-35 T 11-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal DB34_09845 45ff91fb00b12013e219843e2648a1eb 410 SUPERFAMILY SSF53901 1 253 3.84E-74 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 DB34_09845 45ff91fb00b12013e219843e2648a1eb 410 SMART SM00825 Beta-ketoacyl synthase 1 410 3.0E-14 T 11-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain DB34_09845 45ff91fb00b12013e219843e2648a1eb 410 Gene3D G3DSA:3.40.47.10 256 399 7.6E-49 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 DB34_09845 45ff91fb00b12013e219843e2648a1eb 410 SUPERFAMILY SSF53901 214 409 1.32E-67 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 DB34_09845 45ff91fb00b12013e219843e2648a1eb 410 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 1 408 5.3E-185 T 11-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 DB34_09845 45ff91fb00b12013e219843e2648a1eb 410 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 153 169 - T 11-10-2018 IPR018201 Beta-ketoacyl synthase, active site DB34_09845 45ff91fb00b12013e219843e2648a1eb 410 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 246 5.5E-59 T 11-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal DB34_12070 a2e7245ac954519ae6ec5233dcadaece 154 SUPERFAMILY SSF54427 2 154 5.27E-77 T 11-10-2018 IPR032710 NTF2-like domain superfamily DB34_12070 a2e7245ac954519ae6ec5233dcadaece 154 Gene3D G3DSA:3.10.450.50 10 154 6.9E-74 T 11-10-2018 DB34_12070 a2e7245ac954519ae6ec5233dcadaece 154 Pfam PF07080 Protein of unknown function (DUF1348) 7 136 2.2E-63 T 11-10-2018 IPR009783 Protein of unknown function DUF1348 DB34_02860 a4b096f58ef621cf28343b1db98e8666 130 SUPERFAMILY SSF54593 4 130 2.68E-22 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DB34_02860 a4b096f58ef621cf28343b1db98e8666 130 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 125 2.0E-7 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DB34_02860 a4b096f58ef621cf28343b1db98e8666 130 Gene3D G3DSA:3.10.180.10 9 129 4.4E-32 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DB34_03840 b108a884fad6c9de9dcd012d8b5cd21f 265 Pfam PF13614 AAA domain 12 187 1.5E-57 T 11-10-2018 IPR025669 AAA domain DB34_03840 b108a884fad6c9de9dcd012d8b5cd21f 265 SUPERFAMILY SSF52540 12 261 2.91E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_03840 b108a884fad6c9de9dcd012d8b5cd21f 265 Gene3D G3DSA:3.40.50.300 4 264 1.6E-79 T 11-10-2018 DB34_03840 b108a884fad6c9de9dcd012d8b5cd21f 265 PIRSF PIRSF009320 97 265 1.9E-7 T 11-10-2018 DB34_03840 b108a884fad6c9de9dcd012d8b5cd21f 265 PIRSF PIRSF009320 11 61 4.9E-16 T 11-10-2018 DB34_12795 eade7a9e7f0a417b54588eea4754eed7 301 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 126 270 6.5E-25 T 11-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 DB34_12795 eade7a9e7f0a417b54588eea4754eed7 301 Gene3D G3DSA:3.40.50.2000 129 299 6.5E-37 T 11-10-2018 DB34_12795 eade7a9e7f0a417b54588eea4754eed7 301 SUPERFAMILY SSF53756 1 298 2.04E-63 T 11-10-2018 DB34_12795 eade7a9e7f0a417b54588eea4754eed7 301 Gene3D G3DSA:3.40.50.2000 1 127 1.2E-11 T 11-10-2018 DB34_01070 cb0edafdd1f0baa054226877ae05cad4 308 Gene3D G3DSA:1.10.10.10 2 89 3.3E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB34_01070 cb0edafdd1f0baa054226877ae05cad4 308 SUPERFAMILY SSF46785 3 88 2.44E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB34_01070 cb0edafdd1f0baa054226877ae05cad4 308 SUPERFAMILY SSF53850 89 295 2.71E-36 T 11-10-2018 DB34_01070 cb0edafdd1f0baa054226877ae05cad4 308 Pfam PF03466 LysR substrate binding domain 88 293 3.2E-35 T 11-10-2018 IPR005119 LysR, substrate-binding DB34_01070 cb0edafdd1f0baa054226877ae05cad4 308 Gene3D G3DSA:3.40.190.290 91 292 2.2E-50 T 11-10-2018 DB34_01070 cb0edafdd1f0baa054226877ae05cad4 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.4E-14 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB34_10395 75adef8ec488f760b00db588c6f29673 134 Gene3D G3DSA:3.10.450.50 1 124 4.3E-43 T 11-10-2018 DB34_10395 75adef8ec488f760b00db588c6f29673 134 SUPERFAMILY SSF54427 1 123 1.66E-33 T 11-10-2018 IPR032710 NTF2-like domain superfamily DB34_10395 75adef8ec488f760b00db588c6f29673 134 Pfam PF11533 Protein of unknown function (DUF3225) 1 124 1.4E-51 T 11-10-2018 IPR024507 Protein of unknown function DUF3225 DB34_11155 f81ae4288350d6d362b40e3d28f62fff 263 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 64 254 29.996 T 11-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 DB34_11155 f81ae4288350d6d362b40e3d28f62fff 263 Pfam PF01728 FtsJ-like methyltransferase 80 253 3.1E-56 T 11-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 DB34_11155 f81ae4288350d6d362b40e3d28f62fff 263 Gene3D G3DSA:3.40.50.150 76 261 9.1E-63 T 11-10-2018 DB34_11155 f81ae4288350d6d362b40e3d28f62fff 263 PIRSF PIRSF005461 43 263 8.0E-75 T 11-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 DB34_11155 f81ae4288350d6d362b40e3d28f62fff 263 SUPERFAMILY SSF53335 50 255 1.17E-41 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB34_12080 6a73ed8891ceafdbefd3cb55e2fc76c5 456 SUPERFAMILY SSF103473 5 444 5.89E-57 T 11-10-2018 IPR036259 MFS transporter superfamily DB34_12080 6a73ed8891ceafdbefd3cb55e2fc76c5 456 Gene3D G3DSA:1.20.1720.10 13 217 2.3E-39 T 11-10-2018 DB34_12080 6a73ed8891ceafdbefd3cb55e2fc76c5 456 Pfam PF07690 Major Facilitator Superfamily 19 406 1.2E-41 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DB34_12080 6a73ed8891ceafdbefd3cb55e2fc76c5 456 Gene3D G3DSA:1.20.1250.20 261 452 6.3E-17 T 11-10-2018 DB34_00760 7c06b082c775c70fd528f644019dd5b5 314 Gene3D G3DSA:3.40.50.2000 158 310 7.6E-38 T 11-10-2018 DB34_00760 7c06b082c775c70fd528f644019dd5b5 314 SUPERFAMILY SSF53756 12 310 7.06E-66 T 11-10-2018 DB34_00760 7c06b082c775c70fd528f644019dd5b5 314 Gene3D G3DSA:3.40.50.2000 6 157 2.5E-19 T 11-10-2018 DB34_00760 7c06b082c775c70fd528f644019dd5b5 314 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 81 292 8.6E-28 T 11-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 DB34_02795 4394221031169a35727f736ed271d25e 622 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 612 44.745 T 11-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DB34_02795 4394221031169a35727f736ed271d25e 622 Gene3D G3DSA:3.50.30.80 424 575 2.8E-53 T 11-10-2018 DB34_02795 4394221031169a35727f736ed271d25e 622 SUPERFAMILY SSF52016 424 615 3.45E-59 T 11-10-2018 DB34_02795 4394221031169a35727f736ed271d25e 622 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 512 523 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DB34_02795 4394221031169a35727f736ed271d25e 622 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 612 1.1E-242 T 11-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DB34_02795 4394221031169a35727f736ed271d25e 622 SUPERFAMILY SSF143975 3 423 1.57E-131 T 11-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DB34_02795 4394221031169a35727f736ed271d25e 622 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DB34_02795 4394221031169a35727f736ed271d25e 622 Pfam PF00920 Dehydratase family 34 609 3.1E-215 T 11-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DB34_06385 c30d23b44795dbc1622acb618486e934 444 Gene3D G3DSA:2.40.500.30 73 334 4.6E-6 T 11-10-2018 DB34_06385 c30d23b44795dbc1622acb618486e934 444 Gene3D G3DSA:1.20.1270.210 51 329 4.6E-6 T 11-10-2018 DB34_06385 c30d23b44795dbc1622acb618486e934 444 Gene3D G3DSA:3.30.1120.70 222 272 4.6E-6 T 11-10-2018 DB34_06385 c30d23b44795dbc1622acb618486e934 444 Pfam PF04860 Phage portal protein 57 389 8.0E-92 T 11-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein DB34_06385 c30d23b44795dbc1622acb618486e934 444 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 48 395 5.2E-82 T 11-10-2018 IPR006427 Phage portal protein, HK97 DB34_12500 b32b745e8916db55ff9f6d971ffa051f 884 Pfam PF05190 MutS family domain IV 447 539 2.4E-17 T 11-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 DB34_12500 b32b745e8916db55ff9f6d971ffa051f 884 SUPERFAMILY SSF53150 123 294 2.09E-23 T 11-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 DB34_12500 b32b745e8916db55ff9f6d971ffa051f 884 PIRSF PIRSF037677 4 200 4.7E-29 T 11-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 DB34_12500 b32b745e8916db55ff9f6d971ffa051f 884 PIRSF PIRSF037677 252 870 1.5E-120 T 11-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 DB34_12500 b32b745e8916db55ff9f6d971ffa051f 884 Gene3D G3DSA:1.10.1420.10 403 524 2.9E-69 T 11-10-2018 DB34_12500 b32b745e8916db55ff9f6d971ffa051f 884 Gene3D G3DSA:3.40.50.300 587 837 4.3E-91 T 11-10-2018 DB34_12500 b32b745e8916db55ff9f6d971ffa051f 884 SUPERFAMILY SSF52540 587 820 1.71E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_12500 b32b745e8916db55ff9f6d971ffa051f 884 Pfam PF00488 MutS domain V 632 819 2.6E-76 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 DB34_12500 b32b745e8916db55ff9f6d971ffa051f 884 SMART SM00533 299 611 5.0E-63 T 11-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 DB34_12500 b32b745e8916db55ff9f6d971ffa051f 884 Gene3D G3DSA:1.10.1420.10 282 579 2.9E-69 T 11-10-2018 DB34_12500 b32b745e8916db55ff9f6d971ffa051f 884 SMART SM00534 629 816 2.2E-101 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 DB34_12500 b32b745e8916db55ff9f6d971ffa051f 884 SUPERFAMILY SSF55271 4 121 3.4E-35 T 11-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 DB34_12500 b32b745e8916db55ff9f6d971ffa051f 884 Pfam PF01624 MutS domain I 10 126 4.9E-36 T 11-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 DB34_12500 b32b745e8916db55ff9f6d971ffa051f 884 Pfam PF05192 MutS domain III 285 579 1.1E-27 T 11-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 DB34_12500 b32b745e8916db55ff9f6d971ffa051f 884 Gene3D G3DSA:3.30.420.110 153 273 1.1E-14 T 11-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 DB34_12500 b32b745e8916db55ff9f6d971ffa051f 884 Pfam PF05188 MutS domain II 158 265 6.4E-9 T 11-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 DB34_12500 b32b745e8916db55ff9f6d971ffa051f 884 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 710 726 - T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 DB34_12500 b32b745e8916db55ff9f6d971ffa051f 884 Gene3D G3DSA:3.40.1170.10 3 127 2.9E-42 T 11-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 DB34_12500 b32b745e8916db55ff9f6d971ffa051f 884 SUPERFAMILY SSF48334 283 582 1.83E-62 T 11-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily DB34_12500 b32b745e8916db55ff9f6d971ffa051f 884 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 10 872 1.4E-224 T 11-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 DB34_04375 f5da4a440afa7c78b9a5ddb0d7026921 388 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 19 375 24.951 T 11-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DB34_04375 f5da4a440afa7c78b9a5ddb0d7026921 388 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 330 354 - T 11-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DB34_04375 f5da4a440afa7c78b9a5ddb0d7026921 388 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 25 372 1.6E-118 T 11-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DB34_04375 f5da4a440afa7c78b9a5ddb0d7026921 388 Pfam PF01098 Cell cycle protein 30 368 5.6E-94 T 11-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DB34_05340 34ced6e93077e23f27d50fef5da6d8dd 525 SUPERFAMILY SSF52335 8 197 4.58E-67 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily DB34_05340 34ced6e93077e23f27d50fef5da6d8dd 525 Gene3D G3DSA:3.40.140.20 382 525 5.4E-56 T 11-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DB34_05340 34ced6e93077e23f27d50fef5da6d8dd 525 SMART SM00798 139 450 3.1E-201 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DB34_05340 34ced6e93077e23f27d50fef5da6d8dd 525 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 8 525 44.7 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DB34_05340 34ced6e93077e23f27d50fef5da6d8dd 525 Gene3D G3DSA:3.40.140.20 207 357 4.2E-58 T 11-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DB34_05340 34ced6e93077e23f27d50fef5da6d8dd 525 SUPERFAMILY SSF53927 213 525 1.1E-128 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 DB34_05340 34ced6e93077e23f27d50fef5da6d8dd 525 PIRSF PIRSF000414 2 525 7.2E-213 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DB34_05340 34ced6e93077e23f27d50fef5da6d8dd 525 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 9 525 4.2E-204 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DB34_05340 34ced6e93077e23f27d50fef5da6d8dd 525 Pfam PF01808 AICARFT/IMPCHase bienzyme 139 449 6.3E-120 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DB34_05340 34ced6e93077e23f27d50fef5da6d8dd 525 Gene3D G3DSA:3.40.50.1380 1 201 8.4E-87 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily DB34_05340 34ced6e93077e23f27d50fef5da6d8dd 525 Pfam PF02142 MGS-like domain 20 133 2.3E-25 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain DB34_05340 34ced6e93077e23f27d50fef5da6d8dd 525 SMART SM00851 20 134 6.3E-59 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain DB34_08330 46ec0de4c7bce7dc777bd8c9b88aaa01 369 Pfam PF13579 Glycosyl transferase 4-like domain 20 168 8.3E-22 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 DB34_08330 46ec0de4c7bce7dc777bd8c9b88aaa01 369 SUPERFAMILY SSF53756 13 367 1.28E-85 T 11-10-2018 DB34_08330 46ec0de4c7bce7dc777bd8c9b88aaa01 369 Gene3D G3DSA:3.40.50.2000 169 354 1.0E-74 T 11-10-2018 DB34_08330 46ec0de4c7bce7dc777bd8c9b88aaa01 369 Pfam PF00534 Glycosyl transferases group 1 183 348 4.5E-35 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 DB34_08330 46ec0de4c7bce7dc777bd8c9b88aaa01 369 Gene3D G3DSA:3.40.50.2000 20 363 1.0E-74 T 11-10-2018 DB34_02205 246ef02c44fedbb5a9c78b07a1655516 295 Gene3D G3DSA:3.40.50.12740 8 199 7.3E-41 T 11-10-2018 DB34_02205 246ef02c44fedbb5a9c78b07a1655516 295 SUPERFAMILY SSF52172 8 137 9.53E-38 T 11-10-2018 IPR011006 CheY-like superfamily DB34_02205 246ef02c44fedbb5a9c78b07a1655516 295 SMART SM00448 9 122 1.3E-34 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB34_02205 246ef02c44fedbb5a9c78b07a1655516 295 SMART SM00421 231 288 1.7E-15 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB34_02205 246ef02c44fedbb5a9c78b07a1655516 295 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 234 248 3.2E-9 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB34_02205 246ef02c44fedbb5a9c78b07a1655516 295 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 264 276 3.2E-9 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB34_02205 246ef02c44fedbb5a9c78b07a1655516 295 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 248 264 3.2E-9 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB34_02205 246ef02c44fedbb5a9c78b07a1655516 295 Gene3D G3DSA:1.10.10.10 231 294 1.9E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB34_02205 246ef02c44fedbb5a9c78b07a1655516 295 Pfam PF00072 Response regulator receiver domain 11 122 3.6E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB34_02205 246ef02c44fedbb5a9c78b07a1655516 295 SUPERFAMILY SSF46894 223 290 6.12E-15 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DB34_02205 246ef02c44fedbb5a9c78b07a1655516 295 Pfam PF00196 Bacterial regulatory proteins, luxR family 234 286 2.3E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB34_05460 ece899f44ad47d91108006a626a82436 340 Pfam PF12849 PBP superfamily domain 28 306 3.0E-54 T 11-10-2018 IPR024370 PBP domain DB34_05460 ece899f44ad47d91108006a626a82436 340 Gene3D G3DSA:3.40.190.10 104 280 4.6E-112 T 11-10-2018 DB34_05460 ece899f44ad47d91108006a626a82436 340 Gene3D G3DSA:3.40.190.10 31 327 4.6E-112 T 11-10-2018 DB34_05460 ece899f44ad47d91108006a626a82436 340 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 30 338 3.0E-111 T 11-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 DB34_05460 ece899f44ad47d91108006a626a82436 340 PIRSF PIRSF002756 2 340 1.8E-110 T 11-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 DB34_05460 ece899f44ad47d91108006a626a82436 340 SUPERFAMILY SSF53850 30 338 2.52E-89 T 11-10-2018 DB34_06525 f7417e516f1c607821144bb4d2d52a7b 119 SUPERFAMILY SSF48295 8 57 3.71E-12 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 DB34_06525 f7417e516f1c607821144bb4d2d52a7b 119 Pfam PF01527 Transposase 10 70 5.2E-17 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 DB34_06505 f7417e516f1c607821144bb4d2d52a7b 119 SUPERFAMILY SSF48295 8 57 3.71E-12 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 DB34_06505 f7417e516f1c607821144bb4d2d52a7b 119 Pfam PF01527 Transposase 10 70 5.2E-17 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 DB34_12605 7348547ac16c299dd7c12140b739a091 516 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 2 502 2.0E-120 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DB34_12605 7348547ac16c299dd7c12140b739a091 516 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 1 465 18.802 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DB34_12605 7348547ac16c299dd7c12140b739a091 516 Pfam PF03023 MviN-like protein 26 463 7.3E-108 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DB34_12605 7348547ac16c299dd7c12140b739a091 516 PRINTS PR01806 Virulence factor MviN signature 355 374 7.7E-62 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DB34_12605 7348547ac16c299dd7c12140b739a091 516 PRINTS PR01806 Virulence factor MviN signature 50 66 7.7E-62 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DB34_12605 7348547ac16c299dd7c12140b739a091 516 PRINTS PR01806 Virulence factor MviN signature 155 176 7.7E-62 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DB34_12605 7348547ac16c299dd7c12140b739a091 516 PRINTS PR01806 Virulence factor MviN signature 407 424 7.7E-62 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DB34_12605 7348547ac16c299dd7c12140b739a091 516 PRINTS PR01806 Virulence factor MviN signature 131 155 7.7E-62 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DB34_12605 7348547ac16c299dd7c12140b739a091 516 PRINTS PR01806 Virulence factor MviN signature 257 283 7.7E-62 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DB34_12605 7348547ac16c299dd7c12140b739a091 516 PRINTS PR01806 Virulence factor MviN signature 31 50 7.7E-62 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DB34_12605 7348547ac16c299dd7c12140b739a091 516 PIRSF PIRSF002869 1 509 3.7E-149 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DB34_01125 5f493415e64a457bbb413fb6810dc31b 250 Gene3D G3DSA:3.40.50.720 2 243 9.7E-56 T 11-10-2018 DB34_01125 5f493415e64a457bbb413fb6810dc31b 250 SUPERFAMILY SSF51735 7 222 6.9E-57 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily DB34_01125 5f493415e64a457bbb413fb6810dc31b 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 5.5E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_01125 5f493415e64a457bbb413fb6810dc31b 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 5.5E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_01125 5f493415e64a457bbb413fb6810dc31b 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 5.5E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_01125 5f493415e64a457bbb413fb6810dc31b 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 5.5E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_01125 5f493415e64a457bbb413fb6810dc31b 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 5.5E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_01125 5f493415e64a457bbb413fb6810dc31b 250 Pfam PF00106 short chain dehydrogenase 8 185 3.2E-44 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_01125 5f493415e64a457bbb413fb6810dc31b 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 8.1E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_01125 5f493415e64a457bbb413fb6810dc31b 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 8.1E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_01125 5f493415e64a457bbb413fb6810dc31b 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 8.1E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_09100 4adea005920afd36df49bc6b53f8769c 437 Pfam PF07724 AAA domain (Cdc48 subfamily) 196 323 7.3E-37 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DB34_09100 4adea005920afd36df49bc6b53f8769c 437 Gene3D G3DSA:1.10.8.10 112 234 2.8E-104 T 11-10-2018 DB34_09100 4adea005920afd36df49bc6b53f8769c 437 SMART SM01086 329 423 1.8E-24 T 11-10-2018 IPR019489 Clp ATPase, C-terminal DB34_09100 4adea005920afd36df49bc6b53f8769c 437 Gene3D G3DSA:3.40.50.300 8 326 2.8E-104 T 11-10-2018 DB34_09100 4adea005920afd36df49bc6b53f8769c 437 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 7 437 3.9E-177 T 11-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 DB34_09100 4adea005920afd36df49bc6b53f8769c 437 SMART SM00382 51 326 3.7E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_09100 4adea005920afd36df49bc6b53f8769c 437 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 55 101 2.4E-6 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DB34_09100 4adea005920afd36df49bc6b53f8769c 437 SUPERFAMILY SSF52540 7 429 4.44E-77 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_09100 4adea005920afd36df49bc6b53f8769c 437 Gene3D G3DSA:1.10.8.60 329 434 1.7E-36 T 11-10-2018 DB34_09100 4adea005920afd36df49bc6b53f8769c 437 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 329 400 9.4E-8 T 11-10-2018 IPR019489 Clp ATPase, C-terminal DB34_10470 0c1790c45087215006c4fe36e277a535 530 SUPERFAMILY SSF56235 5 530 1.93E-145 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DB34_10470 0c1790c45087215006c4fe36e277a535 530 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 125 144 1.7E-22 T 11-10-2018 DB34_10470 0c1790c45087215006c4fe36e277a535 530 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 32 57 1.7E-22 T 11-10-2018 DB34_10470 0c1790c45087215006c4fe36e277a535 530 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 344 362 1.7E-22 T 11-10-2018 DB34_10470 0c1790c45087215006c4fe36e277a535 530 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 223 239 1.7E-22 T 11-10-2018 DB34_10470 0c1790c45087215006c4fe36e277a535 530 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 368 386 1.7E-22 T 11-10-2018 DB34_10470 0c1790c45087215006c4fe36e277a535 530 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 252 271 1.7E-22 T 11-10-2018 DB34_10470 0c1790c45087215006c4fe36e277a535 530 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 399 414 1.7E-22 T 11-10-2018 DB34_10470 0c1790c45087215006c4fe36e277a535 530 Gene3D G3DSA:3.60.20.40 345 530 5.1E-67 T 11-10-2018 DB34_10470 0c1790c45087215006c4fe36e277a535 530 Pfam PF01019 Gamma-glutamyltranspeptidase 25 525 2.6E-119 T 11-10-2018 DB34_10470 0c1790c45087215006c4fe36e277a535 530 Gene3D G3DSA:1.10.246.130 239 344 1.1E-12 T 11-10-2018 DB34_07910 b16fe26413f4f3ad8c1b0276649bed42 412 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 66 277 3.6E-63 T 11-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 DB34_07910 b16fe26413f4f3ad8c1b0276649bed42 412 Gene3D G3DSA:3.40.50.450 2 282 9.3E-93 T 11-10-2018 DB34_07910 b16fe26413f4f3ad8c1b0276649bed42 412 Pfam PF02481 DNA recombination-mediator protein A 70 269 3.1E-68 T 11-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 DB34_07910 b16fe26413f4f3ad8c1b0276649bed42 412 Gene3D G3DSA:1.10.10.10 327 404 3.6E-15 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB34_07910 b16fe26413f4f3ad8c1b0276649bed42 412 SUPERFAMILY SSF102405 73 279 3.05E-41 T 11-10-2018 DB34_02140 628469d79308be32c47a9688c2c7b7f4 333 Gene3D G3DSA:3.90.180.10 13 326 2.9E-100 T 11-10-2018 DB34_02140 628469d79308be32c47a9688c2c7b7f4 333 SUPERFAMILY SSF51735 115 291 7.48E-42 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily DB34_02140 628469d79308be32c47a9688c2c7b7f4 333 SMART SM00829 10 326 1.7E-35 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 DB34_02140 628469d79308be32c47a9688c2c7b7f4 333 Gene3D G3DSA:3.40.50.720 123 265 2.9E-100 T 11-10-2018 DB34_02140 628469d79308be32c47a9688c2c7b7f4 333 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 90 1.2E-4 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DB34_02140 628469d79308be32c47a9688c2c7b7f4 333 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 1 328 1.1E-135 T 11-10-2018 IPR014189 Quinone oxidoreductase PIG3 Reactome: R-HSA-6803205 DB34_02140 628469d79308be32c47a9688c2c7b7f4 333 Pfam PF00107 Zinc-binding dehydrogenase 154 272 3.7E-25 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DB34_02140 628469d79308be32c47a9688c2c7b7f4 333 SUPERFAMILY SSF50129 1 136 4.11E-35 T 11-10-2018 IPR011032 GroES-like superfamily DB34_10075 2295e93cf69b33baa52855d4b7bcd939 288 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 26 286 34.552 T 11-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 DB34_10075 2295e93cf69b33baa52855d4b7bcd939 288 Pfam PF00218 Indole-3-glycerol phosphate synthase 28 284 5.8E-91 T 11-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 DB34_10075 2295e93cf69b33baa52855d4b7bcd939 288 SUPERFAMILY SSF51366 36 286 6.71E-85 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 DB34_10075 2295e93cf69b33baa52855d4b7bcd939 288 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 80 98 - T 11-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 DB34_10075 2295e93cf69b33baa52855d4b7bcd939 288 Gene3D G3DSA:3.20.20.70 21 287 1.9E-100 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB34_09185 bb97a47515f5eedc0ecd2af74bafd15f 245 SUPERFAMILY SSF55811 88 224 5.47E-6 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DB34_08650 0833d0b6c93354cdcf001e6c1f5b8bdc 276 SUPERFAMILY SSF50249 2 125 8.57E-48 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB34_08650 0833d0b6c93354cdcf001e6c1f5b8bdc 276 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 273 4.2E-126 T 11-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 DB34_08650 0833d0b6c93354cdcf001e6c1f5b8bdc 276 Gene3D G3DSA:2.40.50.140 1 114 1.4E-45 T 11-10-2018 DB34_08650 0833d0b6c93354cdcf001e6c1f5b8bdc 276 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 1.3E-31 T 11-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_08650 0833d0b6c93354cdcf001e6c1f5b8bdc 276 SUPERFAMILY SSF50104 126 272 4.21E-61 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily DB34_08650 0833d0b6c93354cdcf001e6c1f5b8bdc 276 Gene3D G3DSA:4.10.950.10 197 274 3.5E-35 T 11-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_08650 0833d0b6c93354cdcf001e6c1f5b8bdc 276 PIRSF PIRSF002158 6 275 4.2E-102 T 11-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_08650 0833d0b6c93354cdcf001e6c1f5b8bdc 276 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 250 2.5E-57 T 11-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 DB34_08650 0833d0b6c93354cdcf001e6c1f5b8bdc 276 SMART SM01382 124 252 6.3E-91 T 11-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 DB34_08650 0833d0b6c93354cdcf001e6c1f5b8bdc 276 SMART SM01383 42 118 1.6E-43 T 11-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_08650 0833d0b6c93354cdcf001e6c1f5b8bdc 276 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 11-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_08650 0833d0b6c93354cdcf001e6c1f5b8bdc 276 Gene3D G3DSA:2.30.30.30 118 196 1.3E-33 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 DB34_08650 0833d0b6c93354cdcf001e6c1f5b8bdc 276 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 46.468 T 11-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 DB34_06030 2c8f89da29f954697bcf40786bae6678 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 3.2E-17 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_06030 2c8f89da29f954697bcf40786bae6678 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 3.2E-17 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_06030 2c8f89da29f954697bcf40786bae6678 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 3.2E-17 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_06030 2c8f89da29f954697bcf40786bae6678 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 3.2E-17 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_06030 2c8f89da29f954697bcf40786bae6678 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 3.2E-17 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_06030 2c8f89da29f954697bcf40786bae6678 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 255 3.0E-44 T 11-10-2018 DB34_06030 2c8f89da29f954697bcf40786bae6678 257 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 9 190 1.2E-4 T 11-10-2018 DB34_06030 2c8f89da29f954697bcf40786bae6678 257 SUPERFAMILY SSF51735 7 255 6.06E-54 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily DB34_06030 2c8f89da29f954697bcf40786bae6678 257 Gene3D G3DSA:3.40.50.720 1 257 1.1E-69 T 11-10-2018 DB34_12845 2aabe55e8169d05e106c7dd345783e19 291 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 6 159 1.4E-29 T 11-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 DB34_12845 2aabe55e8169d05e106c7dd345783e19 291 Gene3D G3DSA:3.40.50.720 1 161 4.0E-38 T 11-10-2018 DB34_12845 2aabe55e8169d05e106c7dd345783e19 291 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 164 280 3.1E-20 T 11-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 DB34_12845 2aabe55e8169d05e106c7dd345783e19 291 Gene3D G3DSA:1.10.1040.10 162 288 2.6E-26 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DB34_12845 2aabe55e8169d05e106c7dd345783e19 291 PIRSF PIRSF000103 1 290 5.0E-63 T 11-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 DB34_12845 2aabe55e8169d05e106c7dd345783e19 291 SUPERFAMILY SSF51735 5 162 7.1E-32 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily DB34_12845 2aabe55e8169d05e106c7dd345783e19 291 SUPERFAMILY SSF48179 162 285 2.83E-25 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DB34_05365 7bf42c2b136f1cccf9f6263879014213 294 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 13 294 56.147 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DB34_05365 7bf42c2b136f1cccf9f6263879014213 294 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 15 290 9.4E-141 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DB34_05365 7bf42c2b136f1cccf9f6263879014213 294 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 14 292 7.8E-134 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DB34_05365 7bf42c2b136f1cccf9f6263879014213 294 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 254 270 4.8E-59 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DB34_05365 7bf42c2b136f1cccf9f6263879014213 294 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 145 165 4.8E-59 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DB34_05365 7bf42c2b136f1cccf9f6263879014213 294 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 88 108 4.8E-59 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DB34_05365 7bf42c2b136f1cccf9f6263879014213 294 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 67 82 4.8E-59 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DB34_05365 7bf42c2b136f1cccf9f6263879014213 294 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 119 143 4.8E-59 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DB34_05365 7bf42c2b136f1cccf9f6263879014213 294 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 168 183 4.8E-59 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DB34_05365 7bf42c2b136f1cccf9f6263879014213 294 Gene3D G3DSA:3.30.930.10 8 217 3.8E-102 T 11-10-2018 DB34_05365 7bf42c2b136f1cccf9f6263879014213 294 SUPERFAMILY SSF55681 14 290 1.99E-128 T 11-10-2018 DB34_05365 7bf42c2b136f1cccf9f6263879014213 294 Gene3D G3DSA:1.20.58.180 218 294 4.5E-31 T 11-10-2018 DB34_06065 81d8e4605c67533c53a6e8364730174d 253 Gene3D G3DSA:3.40.50.300 1 244 6.1E-64 T 11-10-2018 DB34_06065 81d8e4605c67533c53a6e8364730174d 253 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB34_06065 81d8e4605c67533c53a6e8364730174d 253 Pfam PF00005 ABC transporter 17 164 7.9E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB34_06065 81d8e4605c67533c53a6e8364730174d 253 SMART SM00382 26 212 1.4E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_06065 81d8e4605c67533c53a6e8364730174d 253 SUPERFAMILY SSF52540 2 226 9.71E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_06215 b0f77ecfeee7a354e6ceb43c92a0d1e2 153 SUPERFAMILY SSF47741 84 151 4.06E-29 T 11-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily DB34_06215 b0f77ecfeee7a354e6ceb43c92a0d1e2 153 Gene3D G3DSA:1.10.150.120 79 153 6.8E-25 T 11-10-2018 DB34_06215 b0f77ecfeee7a354e6ceb43c92a0d1e2 153 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 38 46 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 DB34_06215 b0f77ecfeee7a354e6ceb43c92a0d1e2 153 SUPERFAMILY SSF54292 3 76 5.77E-23 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 DB34_06215 b0f77ecfeee7a354e6ceb43c92a0d1e2 153 Gene3D G3DSA:3.10.20.30 1 71 3.9E-24 T 11-10-2018 IPR012675 Beta-grasp domain superfamily DB34_06215 b0f77ecfeee7a354e6ceb43c92a0d1e2 153 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 6 56 4.2E-7 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 DB34_06215 b0f77ecfeee7a354e6ceb43c92a0d1e2 153 Pfam PF01799 [2Fe-2S] binding domain 72 145 1.4E-24 T 11-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 DB34_08215 e7f05a72dbaadbf0771502df5b0f73e0 330 Pfam PF01618 MotA/TolQ/ExbB proton channel family 187 286 1.7E-31 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel DB34_12270 0d7e4796748faaff2090cdc968fc20a4 547 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 359 406 2.5E-11 T 11-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain DB34_12270 0d7e4796748faaff2090cdc968fc20a4 547 SUPERFAMILY SSF56281 10 419 1.13E-87 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DB34_12270 0d7e4796748faaff2090cdc968fc20a4 547 ProSitePatterns PS01292 Uncharacterized protein family UPF0036 signature. 362 390 - T 11-10-2018 IPR001587 Ribonuclease J, conserved site DB34_12270 0d7e4796748faaff2090cdc968fc20a4 547 Pfam PF12706 Beta-lactamase superfamily domain 31 168 2.8E-14 T 11-10-2018 IPR001279 Metallo-beta-lactamase DB34_12270 0d7e4796748faaff2090cdc968fc20a4 547 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 9 541 3.4E-121 T 11-10-2018 IPR004613 Ribonuclease J GO:0003723|GO:0046872 DB34_12270 0d7e4796748faaff2090cdc968fc20a4 547 SMART SM00849 20 221 2.9E-19 T 11-10-2018 IPR001279 Metallo-beta-lactamase DB34_12270 0d7e4796748faaff2090cdc968fc20a4 547 Gene3D G3DSA:3.60.15.10 10 433 1.6E-161 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DB34_12270 0d7e4796748faaff2090cdc968fc20a4 547 Gene3D G3DSA:3.40.50.10710 206 355 1.6E-161 T 11-10-2018 DB34_10320 948df11786ea899f8328f92810cb078c 371 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 11-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 DB34_10320 948df11786ea899f8328f92810cb078c 371 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 154 4.2E-26 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DB34_10320 948df11786ea899f8328f92810cb078c 371 Gene3D G3DSA:3.90.180.10 6 364 1.3E-148 T 11-10-2018 DB34_10320 948df11786ea899f8328f92810cb078c 371 SUPERFAMILY SSF50129 1 184 1.02E-70 T 11-10-2018 IPR011032 GroES-like superfamily DB34_10320 948df11786ea899f8328f92810cb078c 371 SMART SM00829 12 367 1.1E-4 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 DB34_10320 948df11786ea899f8328f92810cb078c 371 SUPERFAMILY SSF51735 161 334 3.31E-45 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily DB34_10320 948df11786ea899f8328f92810cb078c 371 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 2 369 6.1E-218 T 11-10-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 DB34_10320 948df11786ea899f8328f92810cb078c 371 Gene3D G3DSA:3.40.50.720 174 312 1.3E-148 T 11-10-2018 DB34_10320 948df11786ea899f8328f92810cb078c 371 SUPERFAMILY SSF50129 318 369 1.22E-10 T 11-10-2018 IPR011032 GroES-like superfamily DB34_10320 948df11786ea899f8328f92810cb078c 371 Pfam PF00107 Zinc-binding dehydrogenase 197 328 1.4E-24 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DB34_04830 9f20998c4bdb36178d93915eaee09817 303 Gene3D G3DSA:2.40.50.100 45 108 1.4E-9 T 11-10-2018 DB34_04830 9f20998c4bdb36178d93915eaee09817 303 Pfam PF13437 HlyD family secretion protein 154 237 3.9E-9 T 11-10-2018 DB34_04830 9f20998c4bdb36178d93915eaee09817 303 SUPERFAMILY SSF111369 44 199 2.88E-20 T 11-10-2018 DB34_04830 9f20998c4bdb36178d93915eaee09817 303 Gene3D G3DSA:2.40.30.170 168 288 2.7E-25 T 11-10-2018 DB34_04830 9f20998c4bdb36178d93915eaee09817 303 Pfam PF13533 Biotin-lipoyl like 46 93 2.9E-15 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain DB34_13660 548d8c20f4b630f0d64832e7500784a3 334 Pfam PF13361 UvrD-like helicase C-terminal domain 3 279 6.3E-40 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 DB34_13660 548d8c20f4b630f0d64832e7500784a3 334 Gene3D G3DSA:1.10.486.10 63 208 7.8E-76 T 11-10-2018 DB34_13660 548d8c20f4b630f0d64832e7500784a3 334 SUPERFAMILY SSF52540 5 301 2.57E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_13660 548d8c20f4b630f0d64832e7500784a3 334 Gene3D G3DSA:3.40.50.300 3 297 7.8E-76 T 11-10-2018 DB34_13540 e6426a7315cb2ca24f0184e28f963441 178 SUPERFAMILY SSF55486 47 98 8.28E-5 T 11-10-2018 DB34_13540 e6426a7315cb2ca24f0184e28f963441 178 Gene3D G3DSA:3.40.390.50 15 137 4.2E-10 T 11-10-2018 DB34_13540 e6426a7315cb2ca24f0184e28f963441 178 Pfam PF06114 IrrE N-terminal-like domain 44 170 6.4E-17 T 11-10-2018 IPR010359 IrrE N-terminal-like domain DB34_10110 9aa2a7451fd444003224589f9dc83b9b 544 Gene3D G3DSA:3.40.50.300 1 284 2.1E-122 T 11-10-2018 DB34_10110 9aa2a7451fd444003224589f9dc83b9b 544 SUPERFAMILY SSF52540 1 267 1.62E-118 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_10110 9aa2a7451fd444003224589f9dc83b9b 544 Gene3D G3DSA:3.40.50.880 287 544 1.5E-94 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like DB34_10110 9aa2a7451fd444003224589f9dc83b9b 544 TIGRFAM TIGR00337 PyrG: CTP synthase 2 536 1.2E-227 T 11-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 DB34_10110 9aa2a7451fd444003224589f9dc83b9b 544 Pfam PF00117 Glutamine amidotransferase class-I 301 534 5.6E-52 T 11-10-2018 IPR017926 Glutamine amidotransferase DB34_10110 9aa2a7451fd444003224589f9dc83b9b 544 Hamap MF_01227 CTP synthase [pyrG]. 2 541 49.721 T 11-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 DB34_10110 9aa2a7451fd444003224589f9dc83b9b 544 Pfam PF06418 CTP synthase N-terminus 3 264 4.1E-119 T 11-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 DB34_10110 9aa2a7451fd444003224589f9dc83b9b 544 SUPERFAMILY SSF52317 288 541 1.72E-76 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like DB34_04660 e5c283373aa4326d985cba5d2c6ecae4 345 SUPERFAMILY SSF52540 14 242 2.79E-74 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_04660 e5c283373aa4326d985cba5d2c6ecae4 345 Pfam PF00005 ABC transporter 20 166 1.1E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB34_04660 e5c283373aa4326d985cba5d2c6ecae4 345 Gene3D G3DSA:3.40.50.300 3 283 2.2E-72 T 11-10-2018 DB34_04660 e5c283373aa4326d985cba5d2c6ecae4 345 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB34_04660 e5c283373aa4326d985cba5d2c6ecae4 345 SMART SM00382 29 216 3.6E-18 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_04390 5f5ea6854e1adfcd1051246f618b6b44 304 Gene3D G3DSA:2.40.10.350 183 253 4.4E-22 T 11-10-2018 DB34_04390 5f5ea6854e1adfcd1051246f618b6b44 304 PIRSF PIRSF038471 5 278 2.4E-53 T 11-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 DB34_04390 5f5ea6854e1adfcd1051246f618b6b44 304 Pfam PF04085 rod shape-determining protein MreC 126 264 1.2E-23 T 11-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 DB34_04390 5f5ea6854e1adfcd1051246f618b6b44 304 Gene3D G3DSA:2.40.10.340 125 260 4.4E-22 T 11-10-2018 DB34_12855 4c6e4ff7991f6c45bc96f46e83f17059 202 Gene3D G3DSA:2.40.500.20 90 202 2.4E-38 T 11-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DB34_12855 4c6e4ff7991f6c45bc96f46e83f17059 202 PIRSF PIRSF000349 1 202 7.0E-74 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DB34_12855 4c6e4ff7991f6c45bc96f46e83f17059 202 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 97 197 1.0E-33 T 11-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DB34_12855 4c6e4ff7991f6c45bc96f46e83f17059 202 PRINTS PR01703 Manganese superoxide dismutase signature 124 132 2.1E-21 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DB34_12855 4c6e4ff7991f6c45bc96f46e83f17059 202 PRINTS PR01703 Manganese superoxide dismutase signature 162 174 2.1E-21 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DB34_12855 4c6e4ff7991f6c45bc96f46e83f17059 202 PRINTS PR01703 Manganese superoxide dismutase signature 28 41 2.1E-21 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DB34_12855 4c6e4ff7991f6c45bc96f46e83f17059 202 PRINTS PR01703 Manganese superoxide dismutase signature 72 85 2.1E-21 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DB34_12855 4c6e4ff7991f6c45bc96f46e83f17059 202 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 2.1E-21 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DB34_12855 4c6e4ff7991f6c45bc96f46e83f17059 202 SUPERFAMILY SSF46609 1 90 1.17E-30 T 11-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DB34_12855 4c6e4ff7991f6c45bc96f46e83f17059 202 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 164 171 - T 11-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DB34_12855 4c6e4ff7991f6c45bc96f46e83f17059 202 Gene3D G3DSA:1.10.287.990 21 89 3.8E-26 T 11-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DB34_12855 4c6e4ff7991f6c45bc96f46e83f17059 202 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 89 7.3E-27 T 11-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DB34_12855 4c6e4ff7991f6c45bc96f46e83f17059 202 SUPERFAMILY SSF54719 91 201 5.76E-39 T 11-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DB34_05240 e4c622e8b7ddbff25b84d88482dd1910 341 PRINTS PR00982 Lysyl-tRNA synthetase signature 108 125 3.6E-9 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DB34_05240 e4c622e8b7ddbff25b84d88482dd1910 341 PRINTS PR00982 Lysyl-tRNA synthetase signature 226 242 3.6E-9 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DB34_05240 e4c622e8b7ddbff25b84d88482dd1910 341 PRINTS PR00982 Lysyl-tRNA synthetase signature 41 51 3.6E-9 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DB34_05240 e4c622e8b7ddbff25b84d88482dd1910 341 PRINTS PR00982 Lysyl-tRNA synthetase signature 90 103 3.6E-9 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DB34_05240 e4c622e8b7ddbff25b84d88482dd1910 341 SUPERFAMILY SSF55681 25 338 1.31E-69 T 11-10-2018 DB34_05240 e4c622e8b7ddbff25b84d88482dd1910 341 Gene3D G3DSA:3.30.930.10 16 340 5.4E-91 T 11-10-2018 DB34_05240 e4c622e8b7ddbff25b84d88482dd1910 341 Pfam PF00152 tRNA synthetases class II (D, K and N) 27 337 5.5E-37 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB34_05240 e4c622e8b7ddbff25b84d88482dd1910 341 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 28 338 2.0E-110 T 11-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 DB34_11185 51a8b6e94853a0f76496c60437edc23c 245 SMART SM00363 4 66 3.4E-7 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_11185 51a8b6e94853a0f76496c60437edc23c 245 SUPERFAMILY SSF53335 55 243 4.98E-26 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB34_11185 51a8b6e94853a0f76496c60437edc23c 245 PIRSF PIRSF005578 1 245 2.4E-100 T 11-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 DB34_11185 51a8b6e94853a0f76496c60437edc23c 245 Gene3D G3DSA:3.40.50.150 63 245 6.0E-76 T 11-10-2018 DB34_11185 51a8b6e94853a0f76496c60437edc23c 245 TIGRFAM TIGR00478 tly: TlyA family rRNA methyltransferase/putative hemolysin 5 237 1.5E-70 T 11-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 DB34_11185 51a8b6e94853a0f76496c60437edc23c 245 SUPERFAMILY SSF55174 4 68 1.38E-9 T 11-10-2018 DB34_11185 51a8b6e94853a0f76496c60437edc23c 245 Gene3D G3DSA:3.10.290.10 1 62 3.4E-24 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DB34_11185 51a8b6e94853a0f76496c60437edc23c 245 Pfam PF01479 S4 domain 4 47 5.2E-7 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_11185 51a8b6e94853a0f76496c60437edc23c 245 Pfam PF01728 FtsJ-like methyltransferase 60 243 1.9E-23 T 11-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 DB34_02575 0dfa55a5decf29a175240a5b28b563d3 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.716 T 11-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_02575 0dfa55a5decf29a175240a5b28b563d3 89 Pfam PF00312 Ribosomal protein S15 10 88 4.3E-37 T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_02575 0dfa55a5decf29a175240a5b28b563d3 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_02575 0dfa55a5decf29a175240a5b28b563d3 89 SMART SM01387 8 88 6.1E-51 T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_02575 0dfa55a5decf29a175240a5b28b563d3 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 12 88 2.0E-21 T 11-10-2018 DB34_02575 0dfa55a5decf29a175240a5b28b563d3 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 1.7E-36 T 11-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_02575 0dfa55a5decf29a175240a5b28b563d3 89 SUPERFAMILY SSF47060 3 89 3.24E-35 T 11-10-2018 IPR009068 S15/NS1, RNA-binding DB34_02575 0dfa55a5decf29a175240a5b28b563d3 89 Gene3D G3DSA:1.10.287.10 1 89 1.4E-35 T 11-10-2018 DB34_07860 d08250fda835b12449a2f30ab845eacb 679 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 31 675 42.428 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DB34_07860 d08250fda835b12449a2f30ab845eacb 679 Pfam PF00204 DNA gyrase B 292 432 1.7E-40 T 11-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DB34_07860 d08250fda835b12449a2f30ab845eacb 679 PRINTS PR00418 DNA topoisomerase II family signature 142 156 4.4E-64 T 11-10-2018 DB34_07860 d08250fda835b12449a2f30ab845eacb 679 PRINTS PR00418 DNA topoisomerase II family signature 527 543 4.4E-64 T 11-10-2018 DB34_07860 d08250fda835b12449a2f30ab845eacb 679 PRINTS PR00418 DNA topoisomerase II family signature 98 111 4.4E-64 T 11-10-2018 DB34_07860 d08250fda835b12449a2f30ab845eacb 679 PRINTS PR00418 DNA topoisomerase II family signature 312 325 4.4E-64 T 11-10-2018 DB34_07860 d08250fda835b12449a2f30ab845eacb 679 PRINTS PR00418 DNA topoisomerase II family signature 608 624 4.4E-64 T 11-10-2018 DB34_07860 d08250fda835b12449a2f30ab845eacb 679 PRINTS PR00418 DNA topoisomerase II family signature 63 78 4.4E-64 T 11-10-2018 DB34_07860 d08250fda835b12449a2f30ab845eacb 679 PRINTS PR00418 DNA topoisomerase II family signature 565 577 4.4E-64 T 11-10-2018 DB34_07860 d08250fda835b12449a2f30ab845eacb 679 PRINTS PR00418 DNA topoisomerase II family signature 461 475 4.4E-64 T 11-10-2018 DB34_07860 d08250fda835b12449a2f30ab845eacb 679 PRINTS PR00418 DNA topoisomerase II family signature 545 562 4.4E-64 T 11-10-2018 DB34_07860 d08250fda835b12449a2f30ab845eacb 679 Gene3D G3DSA:3.40.50.670 440 678 1.3E-87 T 11-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DB34_07860 d08250fda835b12449a2f30ab845eacb 679 Pfam PF01751 Toprim domain 460 570 6.8E-18 T 11-10-2018 IPR006171 TOPRIM domain DB34_07860 d08250fda835b12449a2f30ab845eacb 679 ProSitePatterns PS00177 DNA topoisomerase II signature. 463 471 - T 11-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DB34_07860 d08250fda835b12449a2f30ab845eacb 679 Gene3D G3DSA:3.30.230.10 282 437 2.4E-42 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DB34_07860 d08250fda835b12449a2f30ab845eacb 679 SMART SM00433 63 671 1.8E-266 T 11-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DB34_07860 d08250fda835b12449a2f30ab845eacb 679 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 32 670 3.4E-226 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DB34_07860 d08250fda835b12449a2f30ab845eacb 679 SUPERFAMILY SSF56719 435 671 2.28E-76 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 DB34_07860 d08250fda835b12449a2f30ab845eacb 679 SMART SM00387 59 205 4.3E-26 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB34_07860 d08250fda835b12449a2f30ab845eacb 679 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 59 204 3.8E-20 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB34_07860 d08250fda835b12449a2f30ab845eacb 679 SUPERFAMILY SSF55874 34 236 1.31E-59 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB34_07860 d08250fda835b12449a2f30ab845eacb 679 PRINTS PR01098 Topoisomerase IV subunit B signature 58 71 2.9E-12 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DB34_07860 d08250fda835b12449a2f30ab845eacb 679 PRINTS PR01098 Topoisomerase IV subunit B signature 407 432 2.9E-12 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DB34_07860 d08250fda835b12449a2f30ab845eacb 679 PRINTS PR01098 Topoisomerase IV subunit B signature 585 607 2.9E-12 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DB34_07860 d08250fda835b12449a2f30ab845eacb 679 PRINTS PR01098 Topoisomerase IV subunit B signature 551 567 2.9E-12 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DB34_07860 d08250fda835b12449a2f30ab845eacb 679 PRINTS PR01098 Topoisomerase IV subunit B signature 383 406 2.9E-12 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DB34_07860 d08250fda835b12449a2f30ab845eacb 679 PRINTS PR01098 Topoisomerase IV subunit B signature 495 516 2.9E-12 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DB34_07860 d08250fda835b12449a2f30ab845eacb 679 PRINTS PR01098 Topoisomerase IV subunit B signature 206 223 2.9E-12 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DB34_07860 d08250fda835b12449a2f30ab845eacb 679 Gene3D G3DSA:3.30.565.10 31 238 4.9E-74 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB34_07860 d08250fda835b12449a2f30ab845eacb 679 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 604 667 1.0E-21 T 11-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 DB34_07860 d08250fda835b12449a2f30ab845eacb 679 SUPERFAMILY SSF54211 291 432 7.4E-37 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DB34_02925 175c3c95b7c6b10a63f5c8abbd17b65b 304 Gene3D G3DSA:3.40.190.290 91 291 7.1E-56 T 11-10-2018 DB34_02925 175c3c95b7c6b10a63f5c8abbd17b65b 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.4E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB34_02925 175c3c95b7c6b10a63f5c8abbd17b65b 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.4E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB34_02925 175c3c95b7c6b10a63f5c8abbd17b65b 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.4E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB34_02925 175c3c95b7c6b10a63f5c8abbd17b65b 304 SUPERFAMILY SSF46785 5 85 3.31E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB34_02925 175c3c95b7c6b10a63f5c8abbd17b65b 304 SUPERFAMILY SSF53850 90 296 3.44E-42 T 11-10-2018 DB34_02925 175c3c95b7c6b10a63f5c8abbd17b65b 304 Gene3D G3DSA:1.10.10.10 3 84 2.4E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB34_02925 175c3c95b7c6b10a63f5c8abbd17b65b 304 Pfam PF03466 LysR substrate binding domain 88 290 8.3E-43 T 11-10-2018 IPR005119 LysR, substrate-binding DB34_02925 175c3c95b7c6b10a63f5c8abbd17b65b 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.5E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB34_07390 4d018602f15e9ba4632154a9538a24eb 385 SUPERFAMILY SSF55347 123 259 6.54E-57 T 11-10-2018 DB34_07390 4d018602f15e9ba4632154a9538a24eb 385 Pfam PF13288 DXP reductoisomerase C-terminal domain 258 374 5.8E-38 T 11-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 DB34_07390 4d018602f15e9ba4632154a9538a24eb 385 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 379 44.696 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 DB34_07390 4d018602f15e9ba4632154a9538a24eb 385 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 143 226 2.2E-36 T 11-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 DB34_07390 4d018602f15e9ba4632154a9538a24eb 385 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 129 3.9E-39 T 11-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 DB34_07390 4d018602f15e9ba4632154a9538a24eb 385 Gene3D G3DSA:3.40.50.720 1 147 1.4E-47 T 11-10-2018 DB34_07390 4d018602f15e9ba4632154a9538a24eb 385 PIRSF PIRSF006205 1 385 7.9E-147 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 DB34_07390 4d018602f15e9ba4632154a9538a24eb 385 SUPERFAMILY SSF51735 2 147 6.41E-46 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily DB34_07390 4d018602f15e9ba4632154a9538a24eb 385 SUPERFAMILY SSF69055 289 380 9.68E-30 T 11-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 DB34_07390 4d018602f15e9ba4632154a9538a24eb 385 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 2 377 1.9E-138 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 DB34_07390 4d018602f15e9ba4632154a9538a24eb 385 Gene3D G3DSA:1.10.1740.10 300 384 1.2E-27 T 11-10-2018 DB34_10730 f43c1463978d326c68c35b3493bb6773 2010 Pfam PF13086 AAA domain 1356 1398 1.2E-7 T 11-10-2018 DB34_10730 f43c1463978d326c68c35b3493bb6773 2010 Pfam PF13087 AAA domain 1431 1617 8.7E-18 T 11-10-2018 DB34_10730 f43c1463978d326c68c35b3493bb6773 2010 Pfam PF13245 AAA domain 711 980 7.9E-7 T 11-10-2018 DB34_10730 f43c1463978d326c68c35b3493bb6773 2010 Gene3D G3DSA:3.40.50.300 1249 1417 7.8E-16 T 11-10-2018 DB34_10730 f43c1463978d326c68c35b3493bb6773 2010 Gene3D G3DSA:3.40.50.300 643 884 3.1E-17 T 11-10-2018 DB34_10730 f43c1463978d326c68c35b3493bb6773 2010 Pfam PF11784 Protein of unknown function (DUF3320) 1852 1900 2.8E-14 T 11-10-2018 IPR021754 Protein of unknown function DUF3320 DB34_10730 f43c1463978d326c68c35b3493bb6773 2010 Gene3D G3DSA:3.40.960.10 1662 1765 2.7E-17 T 11-10-2018 DB34_10730 f43c1463978d326c68c35b3493bb6773 2010 Gene3D G3DSA:3.10.620.30 194 292 7.2E-6 T 11-10-2018 DB34_10730 f43c1463978d326c68c35b3493bb6773 2010 SUPERFAMILY SSF52540 706 1643 9.7E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_10730 f43c1463978d326c68c35b3493bb6773 2010 Pfam PF13195 Protein of unknown function (DUF4011) 410 588 6.4E-41 T 11-10-2018 IPR025103 Protein of unknown function DUF4011 DB34_10730 f43c1463978d326c68c35b3493bb6773 2010 Gene3D G3DSA:3.40.50.300 1443 1628 1.0E-30 T 11-10-2018 DB34_10730 f43c1463978d326c68c35b3493bb6773 2010 SUPERFAMILY SSF52980 1654 1769 3.7E-18 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 DB34_10490 32e3b2a502fba04c37daa85a0afe9f0a 911 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB34_10490 32e3b2a502fba04c37daa85a0afe9f0a 911 SMART SM00382 32 240 2.2E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_10490 32e3b2a502fba04c37daa85a0afe9f0a 911 SMART SM00382 296 479 6.9E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_10490 32e3b2a502fba04c37daa85a0afe9f0a 911 Pfam PF00005 ABC transporter 288 431 4.5E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB34_10490 32e3b2a502fba04c37daa85a0afe9f0a 911 Pfam PF12698 ABC-2 family transporter protein 562 899 6.6E-38 T 11-10-2018 DB34_10490 32e3b2a502fba04c37daa85a0afe9f0a 911 Pfam PF00005 ABC transporter 23 170 8.4E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB34_10490 32e3b2a502fba04c37daa85a0afe9f0a 911 Gene3D G3DSA:3.40.50.300 2 246 9.1E-61 T 11-10-2018 DB34_10490 32e3b2a502fba04c37daa85a0afe9f0a 911 SUPERFAMILY SSF52540 8 234 9.44E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_10490 32e3b2a502fba04c37daa85a0afe9f0a 911 Gene3D G3DSA:3.40.50.300 264 511 6.9E-67 T 11-10-2018 DB34_10490 32e3b2a502fba04c37daa85a0afe9f0a 911 SUPERFAMILY SSF52540 270 492 8.27E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_05980 2aa760ca93e6feb63850ba8b48be5eeb 268 Pfam PF00005 ABC transporter 52 183 4.6E-17 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB34_05980 2aa760ca93e6feb63850ba8b48be5eeb 268 SMART SM00382 61 233 1.7E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_05980 2aa760ca93e6feb63850ba8b48be5eeb 268 Gene3D G3DSA:3.40.50.300 22 264 1.9E-39 T 11-10-2018 DB34_05980 2aa760ca93e6feb63850ba8b48be5eeb 268 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB34_05980 2aa760ca93e6feb63850ba8b48be5eeb 268 SUPERFAMILY SSF52540 49 246 6.01E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_09840 02aa7fc68af587445dcff1d06b803f20 318 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 1 314 29.934 T 11-10-2018 IPR003770 Endolytic murein transglycosylase DB34_09840 02aa7fc68af587445dcff1d06b803f20 318 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 135 311 5.0E-56 T 11-10-2018 IPR003770 Endolytic murein transglycosylase DB34_09840 02aa7fc68af587445dcff1d06b803f20 318 Gene3D G3DSA:3.30.160.60 286 318 6.9E-13 T 11-10-2018 DB34_09840 02aa7fc68af587445dcff1d06b803f20 318 Pfam PF02618 YceG-like family 34 310 2.5E-71 T 11-10-2018 IPR003770 Endolytic murein transglycosylase DB34_07405 f32b8158253d36dcd2a3669ab5f03809 290 SMART SM00935 80 241 1.1E-30 T 11-10-2018 IPR005632 Chaperone protein Skp GO:0051082 DB34_07405 f32b8158253d36dcd2a3669ab5f03809 290 Pfam PF03938 Outer membrane protein (OmpH-like) 95 239 4.9E-21 T 11-10-2018 IPR005632 Chaperone protein Skp GO:0051082 DB34_07405 f32b8158253d36dcd2a3669ab5f03809 290 Gene3D G3DSA:3.30.910.20 93 267 8.7E-27 T 11-10-2018 IPR024930 Skp domain superfamily DB34_07405 f32b8158253d36dcd2a3669ab5f03809 290 SUPERFAMILY SSF111384 100 241 5.1E-20 T 11-10-2018 DB34_00855 7c0293cff1a34d7ab2fbbadbcea6b396 243 Gene3D G3DSA:3.40.190.10 115 202 1.1E-61 T 11-10-2018 DB34_00855 7c0293cff1a34d7ab2fbbadbcea6b396 243 Pfam PF01634 ATP phosphoribosyltransferase 73 230 8.2E-46 T 11-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 DB34_00855 7c0293cff1a34d7ab2fbbadbcea6b396 243 Gene3D G3DSA:3.40.190.10 24 224 1.1E-61 T 11-10-2018 DB34_00855 7c0293cff1a34d7ab2fbbadbcea6b396 243 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 169 190 - T 11-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 DB34_00855 7c0293cff1a34d7ab2fbbadbcea6b396 243 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 23 210 4.4E-52 T 11-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 DB34_00855 7c0293cff1a34d7ab2fbbadbcea6b396 243 SUPERFAMILY SSF53850 20 233 4.34E-58 T 11-10-2018 DB34_00855 7c0293cff1a34d7ab2fbbadbcea6b396 243 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 21 234 43.811 T 11-10-2018 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 DB34_01600 a42b4501bd9ece0393e77beb9b37cd09 115 Pfam PF06305 Lipopolysaccharide assembly protein A domain 21 82 3.6E-8 T 11-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 DB34_09940 52ba530d8964814c9ee38b4f56fa57d0 402 SUPERFAMILY SSF53383 41 397 2.86E-86 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB34_09940 52ba530d8964814c9ee38b4f56fa57d0 402 PIRSF PIRSF001434 1 400 8.0E-114 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DB34_09940 52ba530d8964814c9ee38b4f56fa57d0 402 Gene3D G3DSA:3.90.1150.10 268 399 3.3E-36 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB34_09940 52ba530d8964814c9ee38b4f56fa57d0 402 Gene3D G3DSA:3.40.640.10 17 267 6.0E-67 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB34_09940 52ba530d8964814c9ee38b4f56fa57d0 402 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 28 397 1.4E-93 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DB34_09940 52ba530d8964814c9ee38b4f56fa57d0 402 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 20 397 2.5E-130 T 11-10-2018 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 DB34_00430 2a36a485aea67b37d1e37eaa35bc327f 504 ProSitePatterns PS01135 FtsZ protein signature 2. 102 123 - T 11-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 DB34_00430 2a36a485aea67b37d1e37eaa35bc327f 504 SUPERFAMILY SSF55307 210 323 1.05E-40 T 11-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 DB34_00430 2a36a485aea67b37d1e37eaa35bc327f 504 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 14 350 36.265 T 11-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 DB34_00430 2a36a485aea67b37d1e37eaa35bc327f 504 Gene3D G3DSA:3.40.50.1440 15 322 1.7E-117 T 11-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 DB34_00430 2a36a485aea67b37d1e37eaa35bc327f 504 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 18 179 2.6E-41 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 DB34_00430 2a36a485aea67b37d1e37eaa35bc327f 504 PRINTS PR00423 Cell division protein FtsZ signature 103 123 4.0E-46 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 DB34_00430 2a36a485aea67b37d1e37eaa35bc327f 504 PRINTS PR00423 Cell division protein FtsZ signature 194 216 4.0E-46 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 DB34_00430 2a36a485aea67b37d1e37eaa35bc327f 504 PRINTS PR00423 Cell division protein FtsZ signature 217 238 4.0E-46 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 DB34_00430 2a36a485aea67b37d1e37eaa35bc327f 504 PRINTS PR00423 Cell division protein FtsZ signature 131 152 4.0E-46 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 DB34_00430 2a36a485aea67b37d1e37eaa35bc327f 504 ProSitePatterns PS01134 FtsZ protein signature 1. 49 83 - T 11-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 DB34_00430 2a36a485aea67b37d1e37eaa35bc327f 504 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 16 328 8.9E-121 T 11-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 DB34_00430 2a36a485aea67b37d1e37eaa35bc327f 504 Pfam PF12327 FtsZ family, C-terminal domain 227 322 2.5E-35 T 11-10-2018 IPR024757 Cell division protein FtsZ, C-terminal DB34_00430 2a36a485aea67b37d1e37eaa35bc327f 504 SMART SM00865 212 330 5.3E-51 T 11-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 DB34_00430 2a36a485aea67b37d1e37eaa35bc327f 504 SMART SM00864 18 210 5.0E-105 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 DB34_00430 2a36a485aea67b37d1e37eaa35bc327f 504 SUPERFAMILY SSF52490 17 213 8.24E-67 T 11-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 DB34_07990 a7230c01192d3213d47b9ac2e0753213 241 Pfam PF00753 Metallo-beta-lactamase superfamily 15 171 5.2E-17 T 11-10-2018 IPR001279 Metallo-beta-lactamase DB34_07990 a7230c01192d3213d47b9ac2e0753213 241 SMART SM00849 13 171 4.3E-33 T 11-10-2018 IPR001279 Metallo-beta-lactamase DB34_07990 a7230c01192d3213d47b9ac2e0753213 241 SUPERFAMILY SSF56281 4 241 2.49E-69 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DB34_07990 a7230c01192d3213d47b9ac2e0753213 241 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 3 241 43.46 T 11-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 DB34_07990 a7230c01192d3213d47b9ac2e0753213 241 PIRSF PIRSF005457 1 241 1.6E-100 T 11-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 DB34_07990 a7230c01192d3213d47b9ac2e0753213 241 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 6 237 5.9E-94 T 11-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 DB34_07990 a7230c01192d3213d47b9ac2e0753213 241 Gene3D G3DSA:3.60.15.10 3 241 2.9E-87 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DB34_07990 a7230c01192d3213d47b9ac2e0753213 241 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 172 241 8.4E-23 T 11-10-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 DB34_04210 ec612c917c88ed5d233ac200045f4652 435 Gene3D G3DSA:3.40.640.10 86 322 1.7E-153 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB34_04210 ec612c917c88ed5d233ac200045f4652 435 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 269 278 - T 11-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 DB34_04210 ec612c917c88ed5d233ac200045f4652 435 Pfam PF00155 Aminotransferase class I and II 70 415 1.4E-69 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DB34_04210 ec612c917c88ed5d233ac200045f4652 435 TIGRFAM TIGR01821 5aminolev_synth: 5-aminolevulinic acid synthase 28 421 3.7E-163 T 11-10-2018 IPR010961 Tetrapyrrole biosynthesis, 5-aminolevulinic acid synthase GO:0003870|GO:0030170|GO:0033014 KEGG: 00260+2.3.1.37|KEGG: 00860+2.3.1.37|MetaCyc: PWY-5189|MetaCyc: PWY-7536|Reactome: R-HSA-189451 DB34_04210 ec612c917c88ed5d233ac200045f4652 435 SUPERFAMILY SSF53383 23 420 1.53E-102 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB34_04210 ec612c917c88ed5d233ac200045f4652 435 Gene3D G3DSA:3.90.1150.10 36 412 1.7E-153 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB34_11160 9e87cb5e6bac3d59438b906f6050c319 297 ProSitePatterns PS01125 ROK family signature. 132 159 - T 11-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 DB34_11160 9e87cb5e6bac3d59438b906f6050c319 297 SUPERFAMILY SSF53067 4 296 7.25E-64 T 11-10-2018 DB34_11160 9e87cb5e6bac3d59438b906f6050c319 297 Pfam PF00480 ROK family 6 296 5.2E-79 T 11-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 DB34_11160 9e87cb5e6bac3d59438b906f6050c319 297 Gene3D G3DSA:3.30.420.40 7 293 3.0E-82 T 11-10-2018 DB34_11160 9e87cb5e6bac3d59438b906f6050c319 297 Gene3D G3DSA:3.30.420.40 121 286 3.0E-82 T 11-10-2018 DB34_08515 5a962e64ba5b92d1053af2693897ad9d 1004 Gene3D G3DSA:3.30.460.100 590 841 8.6E-57 T 11-10-2018 DB34_08515 5a962e64ba5b92d1053af2693897ad9d 1004 Gene3D G3DSA:3.30.460.100 53 291 2.6E-58 T 11-10-2018 DB34_08515 5a962e64ba5b92d1053af2693897ad9d 1004 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 46 287 5.9E-56 T 11-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 DB34_08515 5a962e64ba5b92d1053af2693897ad9d 1004 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 581 830 2.2E-47 T 11-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 DB34_08515 5a962e64ba5b92d1053af2693897ad9d 1004 SUPERFAMILY SSF81593 297 467 6.98E-35 T 11-10-2018 DB34_08515 5a962e64ba5b92d1053af2693897ad9d 1004 Pfam PF08335 GlnD PII-uridylyltransferase 877 951 4.7E-11 T 11-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 DB34_08515 5a962e64ba5b92d1053af2693897ad9d 1004 Pfam PF08335 GlnD PII-uridylyltransferase 338 464 7.6E-35 T 11-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 DB34_08515 5a962e64ba5b92d1053af2693897ad9d 1004 SUPERFAMILY SSF81301 29 296 7.48E-63 T 11-10-2018 DB34_08515 5a962e64ba5b92d1053af2693897ad9d 1004 SUPERFAMILY SSF81593 855 1000 4.79E-22 T 11-10-2018 DB34_08515 5a962e64ba5b92d1053af2693897ad9d 1004 SUPERFAMILY SSF81301 553 836 4.51E-56 T 11-10-2018 DB34_08515 5a962e64ba5b92d1053af2693897ad9d 1004 Gene3D G3DSA:1.20.120.330 853 1003 1.1E-20 T 11-10-2018 DB34_08515 5a962e64ba5b92d1053af2693897ad9d 1004 Gene3D G3DSA:1.20.120.330 295 469 5.3E-44 T 11-10-2018 DB34_00080 1f6cfdf328f1627f0aae56552af9871e 201 Gene3D G3DSA:1.10.286.10 3 59 1.5E-19 T 11-10-2018 DB34_00080 1f6cfdf328f1627f0aae56552af9871e 201 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 73 89 - T 11-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 DB34_00080 1f6cfdf328f1627f0aae56552af9871e 201 Pfam PF01227 GTP cyclohydrolase I 16 193 1.2E-73 T 11-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 DB34_00080 1f6cfdf328f1627f0aae56552af9871e 201 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 16 194 2.6E-66 T 11-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 DB34_00080 1f6cfdf328f1627f0aae56552af9871e 201 Gene3D G3DSA:3.30.1130.10 63 196 3.2E-54 T 11-10-2018 DB34_00080 1f6cfdf328f1627f0aae56552af9871e 201 SUPERFAMILY SSF55620 5 194 4.67E-75 T 11-10-2018 DB34_00080 1f6cfdf328f1627f0aae56552af9871e 201 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 11 194 38.788 T 11-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 DB34_00080 1f6cfdf328f1627f0aae56552af9871e 201 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 121 131 - T 11-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 DB34_03060 73ca62d8c4e9383115151fddb66087e1 95 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 95 21.263 T 11-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 DB34_03060 73ca62d8c4e9383115151fddb66087e1 95 SUPERFAMILY SSF141000 3 93 1.57E-25 T 11-10-2018 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C GO:0006450 DB34_03060 73ca62d8c4e9383115151fddb66087e1 95 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 19 90 1.1E-17 T 11-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 DB34_03060 73ca62d8c4e9383115151fddb66087e1 95 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 5 95 1.3E-21 T 11-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 DB34_03060 73ca62d8c4e9383115151fddb66087e1 95 Gene3D G3DSA:1.10.20.60 1 93 3.2E-22 T 11-10-2018 DB34_01690 08aac12c9d79a28d8e383f221fdcfed3 467 SUPERFAMILY SSF53790 222 461 1.44E-80 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 DB34_01690 08aac12c9d79a28d8e383f221fdcfed3 467 Pfam PF10414 Sirohaem synthase dimerisation region 162 217 4.9E-15 T 11-10-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DB34_01690 08aac12c9d79a28d8e383f221fdcfed3 467 Gene3D G3DSA:3.30.160.110 124 159 4.2E-13 T 11-10-2018 DB34_01690 08aac12c9d79a28d8e383f221fdcfed3 467 Pfam PF13241 Putative NAD(P)-binding 14 126 1.4E-23 T 11-10-2018 DB34_01690 08aac12c9d79a28d8e383f221fdcfed3 467 PIRSF PIRSF036426 8 466 8.0E-184 T 11-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DB34_01690 08aac12c9d79a28d8e383f221fdcfed3 467 SUPERFAMILY SSF75615 125 217 9.94E-25 T 11-10-2018 DB34_01690 08aac12c9d79a28d8e383f221fdcfed3 467 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 305 338 - T 11-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DB34_01690 08aac12c9d79a28d8e383f221fdcfed3 467 Gene3D G3DSA:3.40.1010.10 223 340 9.9E-44 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 DB34_01690 08aac12c9d79a28d8e383f221fdcfed3 467 Gene3D G3DSA:3.30.950.10 341 465 1.2E-46 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 DB34_01690 08aac12c9d79a28d8e383f221fdcfed3 467 Gene3D G3DSA:3.40.50.720 9 123 8.9E-28 T 11-10-2018 DB34_01690 08aac12c9d79a28d8e383f221fdcfed3 467 Pfam PF14824 Sirohaem biosynthesis protein central 130 155 9.2E-9 T 11-10-2018 IPR028281 Siroheme synthase, central domain KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DB34_01690 08aac12c9d79a28d8e383f221fdcfed3 467 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 227 437 4.2E-51 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 DB34_01690 08aac12c9d79a28d8e383f221fdcfed3 467 SUPERFAMILY SSF51735 10 123 3.23E-18 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily DB34_01690 08aac12c9d79a28d8e383f221fdcfed3 467 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 225 460 4.3E-92 T 11-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DB34_01690 08aac12c9d79a28d8e383f221fdcfed3 467 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 11 216 1.1E-53 T 11-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DB34_01480 985bd0c8252a8afa13a54f53d7ee6d66 486 ProSitePatterns PS00217 Sugar transport proteins signature 2. 146 171 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 DB34_01480 985bd0c8252a8afa13a54f53d7ee6d66 486 ProSitePatterns PS00216 Sugar transport proteins signature 1. 319 335 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 DB34_01480 985bd0c8252a8afa13a54f53d7ee6d66 486 Pfam PF07690 Major Facilitator Superfamily 47 406 8.8E-35 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DB34_01480 985bd0c8252a8afa13a54f53d7ee6d66 486 SUPERFAMILY SSF103473 31 448 9.02E-68 T 11-10-2018 IPR036259 MFS transporter superfamily DB34_01480 985bd0c8252a8afa13a54f53d7ee6d66 486 Gene3D G3DSA:1.20.1250.20 34 454 4.3E-68 T 11-10-2018 DB34_02685 d019f0884d5f5b4ecf506f43453e4611 257 SUPERFAMILY SSF53448 18 246 6.99E-34 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB34_02685 d019f0884d5f5b4ecf506f43453e4611 257 Pfam PF00535 Glycosyl transferase family 2 20 173 4.2E-24 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DB34_02685 d019f0884d5f5b4ecf506f43453e4611 257 Gene3D G3DSA:3.90.550.10 5 233 1.2E-34 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB34_10970 3dff0527e445a878f3fccba49d9a8165 311 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 291 311 8.3E-11 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DB34_10970 3dff0527e445a878f3fccba49d9a8165 311 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 274 291 8.3E-11 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DB34_10970 3dff0527e445a878f3fccba49d9a8165 311 Gene3D G3DSA:1.10.10.60 256 311 8.0E-15 T 11-10-2018 DB34_10970 3dff0527e445a878f3fccba49d9a8165 311 Gene3D G3DSA:3.30.450.40 7 200 4.8E-36 T 11-10-2018 IPR029016 GAF-like domain superfamily DB34_10970 3dff0527e445a878f3fccba49d9a8165 311 SUPERFAMILY SSF55781 58 200 8.5E-8 T 11-10-2018 DB34_10970 3dff0527e445a878f3fccba49d9a8165 311 Pfam PF02954 Bacterial regulatory protein, Fis family 271 306 6.4E-13 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DB34_10970 3dff0527e445a878f3fccba49d9a8165 311 SUPERFAMILY SSF46689 259 310 1.41E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB34_07675 6a4dd34642166b220a79dc50b97ceabe 640 Pfam PF00501 AMP-binding enzyme 76 515 2.4E-92 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 DB34_07675 6a4dd34642166b220a79dc50b97ceabe 640 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 17 73 2.4E-14 T 11-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 DB34_07675 6a4dd34642166b220a79dc50b97ceabe 640 Gene3D G3DSA:3.30.300.30 511 638 7.1E-28 T 11-10-2018 DB34_07675 6a4dd34642166b220a79dc50b97ceabe 640 Pfam PF13193 AMP-binding enzyme C-terminal domain 524 599 6.5E-20 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain DB34_07675 6a4dd34642166b220a79dc50b97ceabe 640 ProSitePatterns PS00455 Putative AMP-binding domain signature. 254 265 - T 11-10-2018 IPR020845 AMP-binding, conserved site DB34_07675 6a4dd34642166b220a79dc50b97ceabe 640 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 15 633 3.7E-256 T 11-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 DB34_07675 6a4dd34642166b220a79dc50b97ceabe 640 SUPERFAMILY SSF56801 15 631 3.53E-166 T 11-10-2018 DB34_07675 6a4dd34642166b220a79dc50b97ceabe 640 Gene3D G3DSA:3.40.50.12780 46 508 8.2E-104 T 11-10-2018 DB34_09055 5f8d3e47461dae11daa6dddbce2df9f3 288 Pfam PF00756 Putative esterase 28 279 2.0E-51 T 11-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 DB34_09055 5f8d3e47461dae11daa6dddbce2df9f3 288 Gene3D G3DSA:3.40.50.1820 9 287 4.2E-84 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold DB34_09055 5f8d3e47461dae11daa6dddbce2df9f3 288 SUPERFAMILY SSF53474 9 286 2.75E-75 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold DB34_09055 5f8d3e47461dae11daa6dddbce2df9f3 288 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 13 285 1.6E-126 T 11-10-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 DB34_04225 027ba4d8dc94ea87534a94ec85bf87a6 344 Hamap MF_00268 Protein RecA [recA]. 6 330 52.439 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DB34_04225 027ba4d8dc94ea87534a94ec85bf87a6 344 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 5 325 1.5E-174 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DB34_04225 027ba4d8dc94ea87534a94ec85bf87a6 344 Gene3D G3DSA:3.40.50.300 27 268 2.3E-83 T 11-10-2018 DB34_04225 027ba4d8dc94ea87534a94ec85bf87a6 344 Gene3D G3DSA:3.30.250.10 269 341 8.4E-27 T 11-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal DB34_04225 027ba4d8dc94ea87534a94ec85bf87a6 344 SMART SM00382 58 229 2.9E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_04225 027ba4d8dc94ea87534a94ec85bf87a6 344 Pfam PF00154 recA bacterial DNA recombination protein 8 269 4.8E-144 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DB34_04225 027ba4d8dc94ea87534a94ec85bf87a6 344 SUPERFAMILY SSF54752 269 327 1.44E-22 T 11-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal DB34_04225 027ba4d8dc94ea87534a94ec85bf87a6 344 SUPERFAMILY SSF52540 8 268 1.3E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_04225 027ba4d8dc94ea87534a94ec85bf87a6 344 ProSitePatterns PS00321 recA signature. 214 222 - T 11-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 DB34_04225 027ba4d8dc94ea87534a94ec85bf87a6 344 PRINTS PR00142 RecA protein signature 298 315 1.7E-85 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DB34_04225 027ba4d8dc94ea87534a94ec85bf87a6 344 PRINTS PR00142 RecA protein signature 244 273 1.7E-85 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DB34_04225 027ba4d8dc94ea87534a94ec85bf87a6 344 PRINTS PR00142 RecA protein signature 211 239 1.7E-85 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DB34_04225 027ba4d8dc94ea87534a94ec85bf87a6 344 PRINTS PR00142 RecA protein signature 128 157 1.7E-85 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DB34_04225 027ba4d8dc94ea87534a94ec85bf87a6 344 PRINTS PR00142 RecA protein signature 166 195 1.7E-85 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DB34_04225 027ba4d8dc94ea87534a94ec85bf87a6 344 PRINTS PR00142 RecA protein signature 94 123 1.7E-85 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DB34_09640 8dd74b8933f6495ebb283888be654ddf 352 Pfam PF00472 RF-1 domain 206 315 1.5E-42 T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 DB34_09640 8dd74b8933f6495ebb283888be654ddf 352 Gene3D G3DSA:3.30.70.1660 107 336 8.4E-99 T 11-10-2018 DB34_09640 8dd74b8933f6495ebb283888be654ddf 352 SMART SM00937 58 173 4.4E-51 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 DB34_09640 8dd74b8933f6495ebb283888be654ddf 352 SUPERFAMILY SSF75620 26 346 1.44E-125 T 11-10-2018 DB34_09640 8dd74b8933f6495ebb283888be654ddf 352 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 3 351 38.248 T 11-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 DB34_09640 8dd74b8933f6495ebb283888be654ddf 352 Pfam PF03462 PCRF domain 15 198 3.6E-63 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 DB34_09640 8dd74b8933f6495ebb283888be654ddf 352 Gene3D G3DSA:3.30.160.20 205 291 8.4E-99 T 11-10-2018 DB34_09640 8dd74b8933f6495ebb283888be654ddf 352 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 5 348 1.8E-148 T 11-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 DB34_09640 8dd74b8933f6495ebb283888be654ddf 352 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 222 238 - T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 DB34_05405 2109d2fcb2db32853e15bf9d66f30133 432 SMART SM00357 52 118 1.4E-13 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 DB34_05405 2109d2fcb2db32853e15bf9d66f30133 432 SMART SM00382 184 369 4.4E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_05405 2109d2fcb2db32853e15bf9d66f30133 432 Gene3D G3DSA:2.40.50.140 47 123 1.0E-32 T 11-10-2018 DB34_05405 2109d2fcb2db32853e15bf9d66f30133 432 SMART SM00959 5 47 3.4E-17 T 11-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 DB34_05405 2109d2fcb2db32853e15bf9d66f30133 432 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 174 377 5.1E-23 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DB34_05405 2109d2fcb2db32853e15bf9d66f30133 432 SUPERFAMILY SSF50249 49 125 5.65E-28 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB34_05405 2109d2fcb2db32853e15bf9d66f30133 432 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 6.0E-30 T 11-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 DB34_05405 2109d2fcb2db32853e15bf9d66f30133 432 Pfam PF07498 Rho termination factor, N-terminal domain 5 46 1.5E-16 T 11-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 DB34_05405 2109d2fcb2db32853e15bf9d66f30133 432 Gene3D G3DSA:3.40.50.300 130 431 6.4E-121 T 11-10-2018 DB34_05405 2109d2fcb2db32853e15bf9d66f30133 432 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 431 9.8E-207 T 11-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 DB34_05405 2109d2fcb2db32853e15bf9d66f30133 432 SUPERFAMILY SSF52540 91 385 3.26E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_05405 2109d2fcb2db32853e15bf9d66f30133 432 SUPERFAMILY SSF68912 1 46 7.06E-12 T 11-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily DB34_05405 2109d2fcb2db32853e15bf9d66f30133 432 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 432 239.034 T 11-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 DB34_05405 2109d2fcb2db32853e15bf9d66f30133 432 Gene3D G3DSA:1.10.720.10 1 45 1.8E-16 T 11-10-2018 DB34_04555 6e28972adb981696b3179939dffc375e 316 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 143 159 1.3E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_04555 6e28972adb981696b3179939dffc375e 316 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 221 1.3E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_04555 6e28972adb981696b3179939dffc375e 316 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 96 107 1.3E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_04555 6e28972adb981696b3179939dffc375e 316 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 200 1.3E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_04555 6e28972adb981696b3179939dffc375e 316 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 20 37 1.3E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_04555 6e28972adb981696b3179939dffc375e 316 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 96 107 3.7E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_04555 6e28972adb981696b3179939dffc375e 316 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 181 200 3.7E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_04555 6e28972adb981696b3179939dffc375e 316 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 157 3.7E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_04555 6e28972adb981696b3179939dffc375e 316 SUPERFAMILY SSF51735 13 266 6.04E-47 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily DB34_04555 6e28972adb981696b3179939dffc375e 316 Pfam PF00106 short chain dehydrogenase 19 221 1.8E-25 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_04555 6e28972adb981696b3179939dffc375e 316 Gene3D G3DSA:3.40.50.720 6 316 6.2E-73 T 11-10-2018 DB34_02985 62be027e45c15fa5be33cbe9a53c4890 157 SUPERFAMILY SSF51230 82 157 2.49E-21 T 11-10-2018 IPR011053 Single hybrid motif DB34_02985 62be027e45c15fa5be33cbe9a53c4890 157 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 7 157 2.4E-34 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 DB34_02985 62be027e45c15fa5be33cbe9a53c4890 157 Pfam PF00364 Biotin-requiring enzyme 84 156 9.7E-17 T 11-10-2018 IPR000089 Biotin/lipoyl attachment DB34_02985 62be027e45c15fa5be33cbe9a53c4890 157 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 113 130 - T 11-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DB34_02985 62be027e45c15fa5be33cbe9a53c4890 157 Gene3D G3DSA:2.40.50.100 81 157 5.7E-26 T 11-10-2018 DB34_02985 62be027e45c15fa5be33cbe9a53c4890 157 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 103 117 4.9E-8 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 DB34_02985 62be027e45c15fa5be33cbe9a53c4890 157 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 86 99 4.9E-8 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 DB34_02985 62be027e45c15fa5be33cbe9a53c4890 157 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 118 131 4.9E-8 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 DB34_12680 4c982b6fe73ed50613e2f0a0743912c3 67 Pfam PF01165 Ribosomal protein S21 2 55 2.5E-20 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_12680 4c982b6fe73ed50613e2f0a0743912c3 67 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 10 55 12.391 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_12680 4c982b6fe73ed50613e2f0a0743912c3 67 Gene3D G3DSA:1.20.5.1150 14 52 3.6E-9 T 11-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_12680 4c982b6fe73ed50613e2f0a0743912c3 67 ProSitePatterns PS01181 Ribosomal protein S21 signature. 11 23 - T 11-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_12680 4c982b6fe73ed50613e2f0a0743912c3 67 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 57 3.8E-22 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_12680 4c982b6fe73ed50613e2f0a0743912c3 67 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 13 36 9.0E-6 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_06610 26390bcdbee406e3146f92f7f38636b2 166 Pfam PF07452 CHRD domain 51 150 1.9E-16 T 11-10-2018 IPR010895 CHRD DB34_06610 26390bcdbee406e3146f92f7f38636b2 166 SMART SM00754 16 152 6.7E-14 T 11-10-2018 IPR010895 CHRD DB34_09280 c26526d2ce3d3a7e1fb57db3109c1e29 326 Gene3D G3DSA:3.30.360.10 122 305 2.7E-69 T 11-10-2018 DB34_09280 c26526d2ce3d3a7e1fb57db3109c1e29 326 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 121 1.8E-31 T 11-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 DB34_09280 c26526d2ce3d3a7e1fb57db3109c1e29 326 Gene3D G3DSA:3.40.50.720 5 291 2.7E-69 T 11-10-2018 DB34_09280 c26526d2ce3d3a7e1fb57db3109c1e29 326 SUPERFAMILY SSF51735 3 159 1.44E-40 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily DB34_09280 c26526d2ce3d3a7e1fb57db3109c1e29 326 SUPERFAMILY SSF55347 146 248 3.27E-14 T 11-10-2018 DB34_06530 a8d1191824a541890b7a860f924c8956 115 Pfam PF05717 IS66 Orf2 like protein 9 105 6.0E-39 T 11-10-2018 IPR008878 Transposase IS66, Orf2 DB34_06510 a8d1191824a541890b7a860f924c8956 115 Pfam PF05717 IS66 Orf2 like protein 9 105 6.0E-39 T 11-10-2018 IPR008878 Transposase IS66, Orf2 DB34_13505 87e8e45d2b71e1a81a24025537e1bcb7 355 SUPERFAMILY SSF103088 251 343 4.32E-8 T 11-10-2018 IPR036737 OmpA-like domain superfamily DB34_02365 987e2334bed791426a73c7457e454520 507 Pfam PF02321 Outer membrane efflux protein 309 490 1.4E-20 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DB34_02365 987e2334bed791426a73c7457e454520 507 Pfam PF02321 Outer membrane efflux protein 66 279 5.5E-22 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DB34_02365 987e2334bed791426a73c7457e454520 507 Gene3D G3DSA:2.20.200.10 100 381 4.8E-126 T 11-10-2018 DB34_02365 987e2334bed791426a73c7457e454520 507 SUPERFAMILY SSF56954 1 496 5.1E-104 T 11-10-2018 DB34_02365 987e2334bed791426a73c7457e454520 507 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 10 492 4.2E-99 T 11-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 DB34_02365 987e2334bed791426a73c7457e454520 507 Gene3D G3DSA:1.20.1600.10 53 493 4.8E-126 T 11-10-2018 DB34_09805 fcea519fd2b37bd3d58cccc3af4d9ef2 563 Gene3D G3DSA:3.30.413.10 419 563 1.5E-31 T 11-10-2018 DB34_09805 fcea519fd2b37bd3d58cccc3af4d9ef2 563 SUPERFAMILY SSF55124 11 138 4.09E-30 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DB34_09805 fcea519fd2b37bd3d58cccc3af4d9ef2 563 Gene3D G3DSA:3.30.413.10 131 326 2.1E-78 T 11-10-2018 DB34_09805 fcea519fd2b37bd3d58cccc3af4d9ef2 563 SUPERFAMILY SSF56014 421 561 1.3E-35 T 11-10-2018 DB34_09805 fcea519fd2b37bd3d58cccc3af4d9ef2 563 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 339 410 2.4E-16 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DB34_09805 fcea519fd2b37bd3d58cccc3af4d9ef2 563 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 64 121 2.0E-17 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DB34_09805 fcea519fd2b37bd3d58cccc3af4d9ef2 563 Gene3D G3DSA:3.90.480.10 64 403 2.1E-78 T 11-10-2018 DB34_09805 fcea519fd2b37bd3d58cccc3af4d9ef2 563 SUPERFAMILY SSF55124 264 433 3.11E-25 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DB34_09805 fcea519fd2b37bd3d58cccc3af4d9ef2 563 SUPERFAMILY SSF56014 132 284 2.88E-45 T 11-10-2018 DB34_09805 fcea519fd2b37bd3d58cccc3af4d9ef2 563 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 462 558 3.9E-11 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DB34_09805 fcea519fd2b37bd3d58cccc3af4d9ef2 563 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 131 283 2.9E-40 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DB34_04015 2fda463752bc7fc3e1e21ad52c448d48 413 SUPERFAMILY SSF103473 11 405 1.1E-54 T 11-10-2018 IPR036259 MFS transporter superfamily DB34_04015 2fda463752bc7fc3e1e21ad52c448d48 413 Pfam PF07690 Major Facilitator Superfamily 24 368 5.6E-35 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DB34_04015 2fda463752bc7fc3e1e21ad52c448d48 413 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 18 396 3.6E-77 T 11-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 DB34_04015 2fda463752bc7fc3e1e21ad52c448d48 413 Gene3D G3DSA:1.20.1720.10 19 401 5.2E-93 T 11-10-2018 DB34_07155 4c5d0def0836caee4a29ca917674c2bd 656 Pfam PF03169 OPT oligopeptide transporter protein 9 608 7.3E-97 T 11-10-2018 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 DB34_07155 4c5d0def0836caee4a29ca917674c2bd 656 TIGRFAM TIGR00728 OPT_sfam: oligopeptide transporter, OPT superfamily 3 605 2.2E-94 T 11-10-2018 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 DB34_07155 4c5d0def0836caee4a29ca917674c2bd 656 TIGRFAM TIGR00733 TIGR00733: oligopeptide transporter, OPT family 9 608 9.2E-189 T 11-10-2018 IPR004814 Oligopeptide transporter OPT DB34_05300 29d6a85b5b6e44127dc8fb5f6e142e5d 600 SMART SM00388 365 430 1.1E-16 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DB34_05300 29d6a85b5b6e44127dc8fb5f6e142e5d 600 Gene3D G3DSA:1.20.1480.50 269 370 4.8E-7 T 11-10-2018 DB34_05300 29d6a85b5b6e44127dc8fb5f6e142e5d 600 Gene3D G3DSA:1.10.287.130 371 426 8.6E-14 T 11-10-2018 DB34_05300 29d6a85b5b6e44127dc8fb5f6e142e5d 600 Pfam PF13755 Sensor N-terminal transmembrane domain 47 102 4.4E-12 T 11-10-2018 IPR025908 Sensor N-terminal transmembrane domain DB34_05300 29d6a85b5b6e44127dc8fb5f6e142e5d 600 SUPERFAMILY SSF47384 349 429 8.24E-18 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DB34_05300 29d6a85b5b6e44127dc8fb5f6e142e5d 600 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 481 595 1.1E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB34_05300 29d6a85b5b6e44127dc8fb5f6e142e5d 600 Pfam PF00512 His Kinase A (phospho-acceptor) domain 367 429 2.0E-15 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DB34_05300 29d6a85b5b6e44127dc8fb5f6e142e5d 600 SMART SM00387 480 597 6.5E-35 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB34_05300 29d6a85b5b6e44127dc8fb5f6e142e5d 600 Gene3D G3DSA:3.30.565.10 443 598 1.4E-38 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB34_05300 29d6a85b5b6e44127dc8fb5f6e142e5d 600 PRINTS PR00344 Bacterial sensor protein C-terminal signature 581 594 7.7E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB34_05300 29d6a85b5b6e44127dc8fb5f6e142e5d 600 PRINTS PR00344 Bacterial sensor protein C-terminal signature 535 545 7.7E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB34_05300 29d6a85b5b6e44127dc8fb5f6e142e5d 600 PRINTS PR00344 Bacterial sensor protein C-terminal signature 552 570 7.7E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB34_05300 29d6a85b5b6e44127dc8fb5f6e142e5d 600 PRINTS PR00344 Bacterial sensor protein C-terminal signature 517 531 7.7E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB34_05300 29d6a85b5b6e44127dc8fb5f6e142e5d 600 SUPERFAMILY SSF55874 420 595 1.28E-36 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB34_05300 29d6a85b5b6e44127dc8fb5f6e142e5d 600 Pfam PF13756 Stimulus-sensing domain 124 205 2.3E-8 T 11-10-2018 IPR025919 Stimulus-sensing domain DB34_03825 85d83c0a6b95edc1f5a0c12d14fe0295 225 SUPERFAMILY SSF47616 83 217 3.9E-19 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DB34_03825 85d83c0a6b95edc1f5a0c12d14fe0295 225 Gene3D G3DSA:1.20.1050.10 86 213 3.0E-29 T 11-10-2018 DB34_03825 85d83c0a6b95edc1f5a0c12d14fe0295 225 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 75 9.1E-13 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 DB34_03825 85d83c0a6b95edc1f5a0c12d14fe0295 225 SUPERFAMILY SSF52833 1 86 2.79E-18 T 11-10-2018 IPR036249 Thioredoxin-like superfamily DB34_03825 85d83c0a6b95edc1f5a0c12d14fe0295 225 Gene3D G3DSA:3.40.30.10 1 84 3.5E-33 T 11-10-2018 DB34_03825 85d83c0a6b95edc1f5a0c12d14fe0295 225 Pfam PF00043 Glutathione S-transferase, C-terminal domain 145 208 1.3E-7 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal DB34_01730 999e3bdefd14b2ebb3e2b623e6353f9a 468 PIRSF PIRSF000337 8 455 9.2E-130 T 11-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 DB34_01730 999e3bdefd14b2ebb3e2b623e6353f9a 468 SUPERFAMILY SSF51679 9 444 2.49E-115 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 DB34_01730 999e3bdefd14b2ebb3e2b623e6353f9a 468 Pfam PF00296 Luciferase-like monooxygenase 36 393 2.7E-64 T 11-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 DB34_01730 999e3bdefd14b2ebb3e2b623e6353f9a 468 Gene3D G3DSA:3.20.20.30 8 465 5.7E-135 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 DB34_01730 999e3bdefd14b2ebb3e2b623e6353f9a 468 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 13 441 5.7E-149 T 11-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 DB34_01375 eb26e5b18cdc6d3a5c541dc88f987e8a 303 Hamap MF_00653 Coenzyme PQQ synthesis protein B [pqqB]. 1 303 141.97 T 11-10-2018 IPR011842 Coenzyme PQQ biosynthesis protein B DB34_01375 eb26e5b18cdc6d3a5c541dc88f987e8a 303 SUPERFAMILY SSF56281 3 303 5.57E-51 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DB34_01375 eb26e5b18cdc6d3a5c541dc88f987e8a 303 Gene3D G3DSA:3.60.15.10 1 303 5.5E-79 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DB34_01375 eb26e5b18cdc6d3a5c541dc88f987e8a 303 Pfam PF12706 Beta-lactamase superfamily domain 51 270 1.6E-49 T 11-10-2018 IPR001279 Metallo-beta-lactamase DB34_01375 eb26e5b18cdc6d3a5c541dc88f987e8a 303 TIGRFAM TIGR02108 PQQ_syn_pqqB: coenzyme PQQ biosynthesis protein B 4 303 1.7E-122 T 11-10-2018 IPR011842 Coenzyme PQQ biosynthesis protein B DB34_12095 a540c6c8f4929a57fa5ebae3f020685f 287 SUPERFAMILY SSF55909 4 287 2.5E-55 T 11-10-2018 DB34_12095 a540c6c8f4929a57fa5ebae3f020685f 287 Gene3D G3DSA:3.75.10.10 2 287 4.2E-61 T 11-10-2018 DB34_12095 a540c6c8f4929a57fa5ebae3f020685f 287 Pfam PF02274 Amidinotransferase 69 284 3.5E-39 T 11-10-2018 DB34_00480 43239fa69cf51b251990bb9c00ccc828 459 Gene3D G3DSA:3.20.20.70 48 200 3.8E-48 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB34_00480 43239fa69cf51b251990bb9c00ccc828 459 Gene3D G3DSA:3.20.20.70 201 457 3.9E-107 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB34_00480 43239fa69cf51b251990bb9c00ccc828 459 Pfam PF01474 Class-II DAHP synthetase family 15 452 1.1E-201 T 11-10-2018 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 DB34_00480 43239fa69cf51b251990bb9c00ccc828 459 TIGRFAM TIGR01358 DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase 15 458 1.6E-210 T 11-10-2018 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 DB34_00480 43239fa69cf51b251990bb9c00ccc828 459 SUPERFAMILY SSF51569 9 456 1.76E-199 T 11-10-2018 DB34_00405 8e237548c93649068d33c746476086bd 477 Gene3D G3DSA:3.90.190.20 317 473 4.1E-50 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DB34_00405 8e237548c93649068d33c746476086bd 477 SUPERFAMILY SSF51984 10 95 2.62E-27 T 11-10-2018 DB34_00405 8e237548c93649068d33c746476086bd 477 SUPERFAMILY SSF53623 94 317 4.32E-67 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DB34_00405 8e237548c93649068d33c746476086bd 477 Gene3D G3DSA:3.40.1190.10 97 316 1.8E-72 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DB34_00405 8e237548c93649068d33c746476086bd 477 Pfam PF02875 Mur ligase family, glutamate ligase domain 319 402 6.5E-19 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 DB34_00405 8e237548c93649068d33c746476086bd 477 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 11 459 7.7E-158 T 11-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DB34_00405 8e237548c93649068d33c746476086bd 477 SUPERFAMILY SSF53244 318 462 1.03E-43 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DB34_00405 8e237548c93649068d33c746476086bd 477 Pfam PF08245 Mur ligase middle domain 113 299 4.9E-27 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 DB34_00405 8e237548c93649068d33c746476086bd 477 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 8 466 40.563 T 11-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DB34_00405 8e237548c93649068d33c746476086bd 477 Pfam PF01225 Mur ligase family, catalytic domain 10 108 2.5E-30 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 DB34_00405 8e237548c93649068d33c746476086bd 477 Gene3D G3DSA:3.40.50.720 10 96 1.1E-31 T 11-10-2018 DB34_11050 06df183b986bd557d320f44b9cdb12f4 400 PRINTS PR00471 Acetate kinase family signature 303 316 2.8E-36 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DB34_11050 06df183b986bd557d320f44b9cdb12f4 400 PRINTS PR00471 Acetate kinase family signature 201 222 2.8E-36 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DB34_11050 06df183b986bd557d320f44b9cdb12f4 400 PRINTS PR00471 Acetate kinase family signature 325 341 2.8E-36 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DB34_11050 06df183b986bd557d320f44b9cdb12f4 400 PRINTS PR00471 Acetate kinase family signature 172 185 2.8E-36 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DB34_11050 06df183b986bd557d320f44b9cdb12f4 400 PRINTS PR00471 Acetate kinase family signature 5 16 2.8E-36 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DB34_11050 06df183b986bd557d320f44b9cdb12f4 400 PRINTS PR00471 Acetate kinase family signature 377 389 2.8E-36 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DB34_11050 06df183b986bd557d320f44b9cdb12f4 400 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 201 218 - T 11-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DB34_11050 06df183b986bd557d320f44b9cdb12f4 400 Hamap MF_00020 Acetate kinase [ackA]. 1 399 136.333 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DB34_11050 06df183b986bd557d320f44b9cdb12f4 400 Gene3D G3DSA:3.30.420.40 1 193 1.4E-52 T 11-10-2018 DB34_11050 06df183b986bd557d320f44b9cdb12f4 400 PIRSF PIRSF000722 1 400 1.2E-129 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DB34_11050 06df183b986bd557d320f44b9cdb12f4 400 Gene3D G3DSA:3.30.420.40 197 397 4.0E-70 T 11-10-2018 DB34_11050 06df183b986bd557d320f44b9cdb12f4 400 TIGRFAM TIGR00016 ackA: acetate kinase 3 391 5.0E-103 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DB34_11050 06df183b986bd557d320f44b9cdb12f4 400 Pfam PF00871 Acetokinase family 5 388 5.2E-103 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DB34_11050 06df183b986bd557d320f44b9cdb12f4 400 SUPERFAMILY SSF53067 157 396 1.19E-72 T 11-10-2018 DB34_11050 06df183b986bd557d320f44b9cdb12f4 400 SUPERFAMILY SSF53067 4 192 6.91E-49 T 11-10-2018 DB34_12220 d6888132d3dee2804d596cb2269aaea8 268 Pfam PF12804 MobA-like NTP transferase domain 11 217 2.0E-22 T 11-10-2018 IPR025877 MobA-like NTP transferase DB34_12220 d6888132d3dee2804d596cb2269aaea8 268 SUPERFAMILY SSF53448 24 246 3.83E-34 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB34_12220 d6888132d3dee2804d596cb2269aaea8 268 Gene3D G3DSA:3.90.550.10 7 249 2.6E-57 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB34_12375 4e6cff3fdc762ba96a931c24134cd645 421 SMART SM00382 109 263 2.2E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_12375 4e6cff3fdc762ba96a931c24134cd645 421 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 3 411 53.174 T 11-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 DB34_12375 4e6cff3fdc762ba96a931c24134cd645 421 SMART SM00994 11 50 1.7E-24 T 11-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 DB34_12375 4e6cff3fdc762ba96a931c24134cd645 421 Gene3D G3DSA:1.10.8.60 312 419 1.6E-39 T 11-10-2018 DB34_12375 4e6cff3fdc762ba96a931c24134cd645 421 SMART SM01086 313 408 1.3E-33 T 11-10-2018 IPR019489 Clp ATPase, C-terminal DB34_12375 4e6cff3fdc762ba96a931c24134cd645 421 SUPERFAMILY SSF52540 62 400 1.02E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_12375 4e6cff3fdc762ba96a931c24134cd645 421 Pfam PF07724 AAA domain (Cdc48 subfamily) 110 307 5.8E-50 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DB34_12375 4e6cff3fdc762ba96a931c24134cd645 421 Gene3D G3DSA:3.40.50.300 55 311 8.2E-108 T 11-10-2018 DB34_12375 4e6cff3fdc762ba96a931c24134cd645 421 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 9 405 1.8E-199 T 11-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 DB34_12375 4e6cff3fdc762ba96a931c24134cd645 421 SUPERFAMILY SSF57716 12 47 1.18E-11 T 11-10-2018 DB34_12375 4e6cff3fdc762ba96a931c24134cd645 421 Gene3D G3DSA:3.30.50.30 2 50 3.0E-24 T 11-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily DB34_12375 4e6cff3fdc762ba96a931c24134cd645 421 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 313 387 2.6E-16 T 11-10-2018 IPR019489 Clp ATPase, C-terminal DB34_12375 4e6cff3fdc762ba96a931c24134cd645 421 Pfam PF06689 ClpX C4-type zinc finger 12 49 6.0E-20 T 11-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 DB34_07845 9911d33866cb23fddf8d73014a9ab65d 635 SMART SM01340 215 333 1.6E-46 T 11-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 DB34_07845 9911d33866cb23fddf8d73014a9ab65d 635 SUPERFAMILY SSF118116 438 634 1.31E-55 T 11-10-2018 IPR037198 MutL, C-terminal domain superfamily DB34_07845 9911d33866cb23fddf8d73014a9ab65d 635 Pfam PF08676 MutL C terminal dimerisation domain 439 592 5.8E-44 T 11-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 DB34_07845 9911d33866cb23fddf8d73014a9ab65d 635 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 33 133 4.3E-10 T 11-10-2018 DB34_07845 9911d33866cb23fddf8d73014a9ab65d 635 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 10 632 25.502 T 11-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 DB34_07845 9911d33866cb23fddf8d73014a9ab65d 635 Gene3D G3DSA:2.30.42.20 445 629 6.5E-57 T 11-10-2018 DB34_07845 9911d33866cb23fddf8d73014a9ab65d 635 SUPERFAMILY SSF55874 10 208 1.31E-47 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB34_07845 9911d33866cb23fddf8d73014a9ab65d 635 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 11 312 4.6E-82 T 11-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 DB34_07845 9911d33866cb23fddf8d73014a9ab65d 635 Gene3D G3DSA:3.30.565.10 11 219 1.5E-57 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB34_07845 9911d33866cb23fddf8d73014a9ab65d 635 SMART SM00853 443 592 3.7E-49 T 11-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 DB34_07845 9911d33866cb23fddf8d73014a9ab65d 635 Gene3D G3DSA:3.30.1370.100 487 587 6.5E-57 T 11-10-2018 DB34_07845 9911d33866cb23fddf8d73014a9ab65d 635 Gene3D G3DSA:3.30.230.10 222 332 6.6E-30 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DB34_07845 9911d33866cb23fddf8d73014a9ab65d 635 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 220 332 2.0E-32 T 11-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 DB34_07845 9911d33866cb23fddf8d73014a9ab65d 635 SUPERFAMILY SSF54211 202 333 6.45E-29 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DB34_07845 9911d33866cb23fddf8d73014a9ab65d 635 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 101 107 - T 11-10-2018 IPR014762 DNA mismatch repair, conserved site DB34_11165 1436548a9a205dff0ab959f5c3f261bf 83 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 6 30 - T 11-10-2018 IPR001455 TusA-like domain DB34_11165 1436548a9a205dff0ab959f5c3f261bf 83 SUPERFAMILY SSF64307 5 72 5.36E-22 T 11-10-2018 IPR036868 TusA-like domain superfamily DB34_11165 1436548a9a205dff0ab959f5c3f261bf 83 Gene3D G3DSA:3.30.110.40 1 74 5.3E-25 T 11-10-2018 IPR036868 TusA-like domain superfamily DB34_11165 1436548a9a205dff0ab959f5c3f261bf 83 Pfam PF01206 Sulfurtransferase TusA 5 72 9.5E-22 T 11-10-2018 IPR001455 TusA-like domain DB34_09300 648dd618b6769b73c5f2ab08277513c2 356 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 113 127 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site DB34_09300 648dd618b6769b73c5f2ab08277513c2 356 Gene3D G3DSA:1.10.600.10 25 356 1.2E-105 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily DB34_09300 648dd618b6769b73c5f2ab08277513c2 356 Pfam PF00348 Polyprenyl synthetase 60 306 2.5E-73 T 11-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 DB34_09300 648dd618b6769b73c5f2ab08277513c2 356 SUPERFAMILY SSF48576 33 354 2.08E-93 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily DB34_07740 71e24f3dad0b82dde12b6c5d7fcd2590 494 SUPERFAMILY SSF53187 169 486 5.02E-118 T 11-10-2018 DB34_07740 71e24f3dad0b82dde12b6c5d7fcd2590 494 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 23 133 1.6E-17 T 11-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 DB34_07740 71e24f3dad0b82dde12b6c5d7fcd2590 494 SUPERFAMILY SSF52949 4 172 4.71E-21 T 11-10-2018 DB34_07740 71e24f3dad0b82dde12b6c5d7fcd2590 494 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 174 480 3.5E-123 T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 DB34_07740 71e24f3dad0b82dde12b6c5d7fcd2590 494 Gene3D G3DSA:3.40.220.10 2 151 1.0E-22 T 11-10-2018 DB34_07740 71e24f3dad0b82dde12b6c5d7fcd2590 494 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 2 489 35.018 T 11-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 DB34_07740 71e24f3dad0b82dde12b6c5d7fcd2590 494 PRINTS PR00481 Cytosol aminopeptidase signature 309 330 5.8E-51 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DB34_07740 71e24f3dad0b82dde12b6c5d7fcd2590 494 PRINTS PR00481 Cytosol aminopeptidase signature 331 351 5.8E-51 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DB34_07740 71e24f3dad0b82dde12b6c5d7fcd2590 494 PRINTS PR00481 Cytosol aminopeptidase signature 360 375 5.8E-51 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DB34_07740 71e24f3dad0b82dde12b6c5d7fcd2590 494 PRINTS PR00481 Cytosol aminopeptidase signature 272 293 5.8E-51 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DB34_07740 71e24f3dad0b82dde12b6c5d7fcd2590 494 PRINTS PR00481 Cytosol aminopeptidase signature 250 267 5.8E-51 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DB34_07740 71e24f3dad0b82dde12b6c5d7fcd2590 494 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 335 342 - T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 DB34_07740 71e24f3dad0b82dde12b6c5d7fcd2590 494 Gene3D G3DSA:3.40.630.10 155 489 1.6E-132 T 11-10-2018 DB34_10595 136b4249289fce502f134cda993785c8 2852 Gene3D G3DSA:2.60.420.10 2359 2828 2.7E-200 T 11-10-2018 DB34_10595 136b4249289fce502f134cda993785c8 2852 Gene3D G3DSA:1.50.10.140 1006 1153 6.4E-10 T 11-10-2018 DB34_10595 136b4249289fce502f134cda993785c8 2852 Gene3D G3DSA:1.50.10.140 1268 1542 2.6E-11 T 11-10-2018 DB34_10595 136b4249289fce502f134cda993785c8 2852 SUPERFAMILY SSF48208 2336 2831 4.25E-93 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 DB34_10595 136b4249289fce502f134cda993785c8 2852 Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain 2351 2775 1.1E-115 T 11-10-2018 IPR033432 Glycosyl hydrolase 36, catalytic domain DB34_10595 136b4249289fce502f134cda993785c8 2852 Gene3D G3DSA:2.70.98.40 1569 1859 3.2E-82 T 11-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily DB34_10595 136b4249289fce502f134cda993785c8 2852 Gene3D G3DSA:2.70.98.40 2057 2355 1.0E-85 T 11-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily DB34_10595 136b4249289fce502f134cda993785c8 2852 SMART SM01068 1558 1619 2.7E-19 T 11-10-2018 IPR009342 Putative carbohydrate binding domain DB34_10595 136b4249289fce502f134cda993785c8 2852 SMART SM01068 2056 2121 6.0E-29 T 11-10-2018 IPR009342 Putative carbohydrate binding domain DB34_10595 136b4249289fce502f134cda993785c8 2852 Pfam PF10091 Putative glucoamylase 1322 1528 4.1E-13 T 11-10-2018 IPR019282 Domain of unknown function DUF2329 DB34_10595 136b4249289fce502f134cda993785c8 2852 SUPERFAMILY SSF74650 1572 1828 1.29E-76 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 DB34_10595 136b4249289fce502f134cda993785c8 2852 Gene3D G3DSA:1.50.10.10 2364 2775 2.7E-200 T 11-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 DB34_10595 136b4249289fce502f134cda993785c8 2852 SUPERFAMILY SSF74650 2056 2323 2.48E-77 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 DB34_10595 136b4249289fce502f134cda993785c8 2852 Pfam PF06165 Glycosyltransferase family 36 2079 2320 1.4E-71 T 11-10-2018 IPR010383 Glycosyl hydrolase 94 DB34_10595 136b4249289fce502f134cda993785c8 2852 Pfam PF06165 Glycosyltransferase family 36 1580 1825 1.7E-70 T 11-10-2018 IPR010383 Glycosyl hydrolase 94 DB34_07960 c65f1e2086c4e521de238ebba1fc4afc 574 SUPERFAMILY SSF51905 113 475 1.1E-64 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_07960 c65f1e2086c4e521de238ebba1fc4afc 574 Pfam PF00364 Biotin-requiring enzyme 4 76 7.6E-20 T 11-10-2018 IPR000089 Biotin/lipoyl attachment DB34_07960 c65f1e2086c4e521de238ebba1fc4afc 574 Gene3D G3DSA:3.30.390.30 454 574 1.1E-47 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 DB34_07960 c65f1e2086c4e521de238ebba1fc4afc 574 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 DB34_07960 c65f1e2086c4e521de238ebba1fc4afc 574 SUPERFAMILY SSF51230 1 95 4.32E-27 T 11-10-2018 IPR011053 Single hybrid motif DB34_07960 c65f1e2086c4e521de238ebba1fc4afc 574 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 451 472 3.8E-78 T 11-10-2018 DB34_07960 c65f1e2086c4e521de238ebba1fc4afc 574 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 247 256 3.8E-78 T 11-10-2018 DB34_07960 c65f1e2086c4e521de238ebba1fc4afc 574 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 283 308 3.8E-78 T 11-10-2018 DB34_07960 c65f1e2086c4e521de238ebba1fc4afc 574 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 150 165 3.8E-78 T 11-10-2018 DB34_07960 c65f1e2086c4e521de238ebba1fc4afc 574 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 516 531 3.8E-78 T 11-10-2018 DB34_07960 c65f1e2086c4e521de238ebba1fc4afc 574 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 117 139 3.8E-78 T 11-10-2018 DB34_07960 c65f1e2086c4e521de238ebba1fc4afc 574 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 373 387 3.8E-78 T 11-10-2018 DB34_07960 c65f1e2086c4e521de238ebba1fc4afc 574 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 416 423 3.8E-78 T 11-10-2018 DB34_07960 c65f1e2086c4e521de238ebba1fc4afc 574 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 538 558 3.8E-78 T 11-10-2018 DB34_07960 c65f1e2086c4e521de238ebba1fc4afc 574 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 116 573 1.4E-175 T 11-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 DB34_07960 c65f1e2086c4e521de238ebba1fc4afc 574 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 401 423 2.6E-39 T 11-10-2018 DB34_07960 c65f1e2086c4e521de238ebba1fc4afc 574 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 118 137 2.6E-39 T 11-10-2018 DB34_07960 c65f1e2086c4e521de238ebba1fc4afc 574 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 372 388 2.6E-39 T 11-10-2018 DB34_07960 c65f1e2086c4e521de238ebba1fc4afc 574 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 244 262 2.6E-39 T 11-10-2018 DB34_07960 c65f1e2086c4e521de238ebba1fc4afc 574 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 301 2.6E-39 T 11-10-2018 DB34_07960 c65f1e2086c4e521de238ebba1fc4afc 574 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 151 161 - T 11-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 DB34_07960 c65f1e2086c4e521de238ebba1fc4afc 574 SUPERFAMILY SSF55424 451 573 5.5E-44 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 DB34_07960 c65f1e2086c4e521de238ebba1fc4afc 574 PIRSF PIRSF000350 38 572 3.7E-93 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 DB34_07960 c65f1e2086c4e521de238ebba1fc4afc 574 Gene3D G3DSA:2.40.50.100 2 103 5.6E-24 T 11-10-2018 DB34_07960 c65f1e2086c4e521de238ebba1fc4afc 574 Gene3D G3DSA:3.50.50.60 117 436 2.1E-118 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_07960 c65f1e2086c4e521de238ebba1fc4afc 574 Gene3D G3DSA:3.50.50.60 256 379 2.1E-118 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_07960 c65f1e2086c4e521de238ebba1fc4afc 574 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 116 436 8.5E-72 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DB34_07960 c65f1e2086c4e521de238ebba1fc4afc 574 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 455 564 1.7E-40 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 DB34_07400 b7912f66ff1b09afd047fd9064709fdf 834 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 70 834 22.045 T 11-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 DB34_07400 b7912f66ff1b09afd047fd9064709fdf 834 Gene3D G3DSA:3.10.20.310 395 479 4.3E-20 T 11-10-2018 DB34_07400 b7912f66ff1b09afd047fd9064709fdf 834 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 84 834 4.5E-213 T 11-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 DB34_07400 b7912f66ff1b09afd047fd9064709fdf 834 Gene3D G3DSA:3.10.20.310 80 149 5.6E-20 T 11-10-2018 DB34_07400 b7912f66ff1b09afd047fd9064709fdf 834 Pfam PF01103 Surface antigen 503 834 1.3E-62 T 11-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 DB34_07400 b7912f66ff1b09afd047fd9064709fdf 834 Gene3D G3DSA:2.40.160.50 480 834 2.9E-90 T 11-10-2018 DB34_07400 b7912f66ff1b09afd047fd9064709fdf 834 Pfam PF07244 Surface antigen variable number repeat 232 318 2.0E-12 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 DB34_07400 b7912f66ff1b09afd047fd9064709fdf 834 Pfam PF07244 Surface antigen variable number repeat 151 227 3.9E-13 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 DB34_07400 b7912f66ff1b09afd047fd9064709fdf 834 Pfam PF07244 Surface antigen variable number repeat 321 400 1.8E-4 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 DB34_07400 b7912f66ff1b09afd047fd9064709fdf 834 Pfam PF07244 Surface antigen variable number repeat 404 475 1.3E-9 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 DB34_07400 b7912f66ff1b09afd047fd9064709fdf 834 Pfam PF07244 Surface antigen variable number repeat 83 138 9.1E-6 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 DB34_07400 b7912f66ff1b09afd047fd9064709fdf 834 PIRSF PIRSF006076 28 834 2.8E-230 T 11-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 DB34_07400 b7912f66ff1b09afd047fd9064709fdf 834 Gene3D G3DSA:3.10.20.310 231 319 3.8E-19 T 11-10-2018 DB34_07400 b7912f66ff1b09afd047fd9064709fdf 834 Gene3D G3DSA:3.10.20.310 150 227 5.5E-16 T 11-10-2018 DB34_07400 b7912f66ff1b09afd047fd9064709fdf 834 Gene3D G3DSA:3.10.20.310 322 394 7.8E-11 T 11-10-2018 DB34_02710 049764223839a96a33925e126f7fa75a 100 Pfam PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter 42 93 1.3E-13 T 11-10-2018 IPR032820 Putative F0F1-ATPase subunit, Ca2+/Mg2+ transporter DB34_02710 049764223839a96a33925e126f7fa75a 100 PIRSF PIRSF032126 1 100 3.7E-19 T 11-10-2018 IPR016989 ATP synthase protein I, alphaproteobacterial DB34_11065 db7a77dce8cbc088b4c4cbbc51f77b4d 1195 Gene3D G3DSA:3.40.50.920 263 423 1.1E-58 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DB34_11065 db7a77dce8cbc088b4c4cbbc51f77b4d 1195 Gene3D G3DSA:3.40.50.970 802 1183 7.2E-146 T 11-10-2018 DB34_11065 db7a77dce8cbc088b4c4cbbc51f77b4d 1195 SUPERFAMILY SSF52518 802 1184 6.87E-119 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold DB34_11065 db7a77dce8cbc088b4c4cbbc51f77b4d 1195 SUPERFAMILY SSF52922 264 424 3.3E-44 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DB34_11065 db7a77dce8cbc088b4c4cbbc51f77b4d 1195 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 9 1180 0.0 T 11-10-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 DB34_11065 db7a77dce8cbc088b4c4cbbc51f77b4d 1195 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 435 618 2.7E-26 T 11-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 DB34_11065 db7a77dce8cbc088b4c4cbbc51f77b4d 1195 Gene3D G3DSA:3.30.70.20 678 799 1.7E-34 T 11-10-2018 DB34_11065 db7a77dce8cbc088b4c4cbbc51f77b4d 1195 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 698 709 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DB34_11065 db7a77dce8cbc088b4c4cbbc51f77b4d 1195 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 754 765 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DB34_11065 db7a77dce8cbc088b4c4cbbc51f77b4d 1195 SUPERFAMILY SSF53323 426 676 5.23E-74 T 11-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 DB34_11065 db7a77dce8cbc088b4c4cbbc51f77b4d 1195 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 22 251 6.2E-74 T 11-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 DB34_11065 db7a77dce8cbc088b4c4cbbc51f77b4d 1195 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 969 1080 6.6E-8 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 DB34_11065 db7a77dce8cbc088b4c4cbbc51f77b4d 1195 SUPERFAMILY SSF54862 674 846 9.1E-23 T 11-10-2018 DB34_11065 db7a77dce8cbc088b4c4cbbc51f77b4d 1195 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 273 370 3.8E-12 T 11-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II DB34_11065 db7a77dce8cbc088b4c4cbbc51f77b4d 1195 Gene3D G3DSA:3.40.920.10 425 633 3.2E-79 T 11-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 DB34_11065 db7a77dce8cbc088b4c4cbbc51f77b4d 1195 PIRSF PIRSF000159 4 1187 0.0 T 11-10-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 DB34_11065 db7a77dce8cbc088b4c4cbbc51f77b4d 1195 Pfam PF10371 Domain of unknown function 636 687 5.5E-21 T 11-10-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 DB34_11065 db7a77dce8cbc088b4c4cbbc51f77b4d 1195 SMART SM00890 631 688 1.4E-24 T 11-10-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 DB34_11065 db7a77dce8cbc088b4c4cbbc51f77b4d 1195 Gene3D G3DSA:3.40.50.970 7 262 1.8E-96 T 11-10-2018 DB34_11065 db7a77dce8cbc088b4c4cbbc51f77b4d 1195 Pfam PF12838 4Fe-4S dicluster domain 697 766 2.3E-9 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DB34_11065 db7a77dce8cbc088b4c4cbbc51f77b4d 1195 SUPERFAMILY SSF52518 9 262 1.71E-67 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold DB34_09465 058b49d1ff42c9e16ea79736fbb7658f 109 Pfam PF04977 Septum formation initiator 23 101 6.2E-9 T 11-10-2018 IPR007060 Septum formation initiator FtsL/DivIC DB34_02390 ce6018269f19eb40a4743323b69b20c2 435 Gene3D G3DSA:1.20.1250.20 18 223 3.5E-46 T 11-10-2018 DB34_02390 ce6018269f19eb40a4743323b69b20c2 435 Pfam PF07690 Major Facilitator Superfamily 32 394 6.0E-38 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DB34_02390 ce6018269f19eb40a4743323b69b20c2 435 SUPERFAMILY SSF103473 18 431 4.19E-77 T 11-10-2018 IPR036259 MFS transporter superfamily DB34_02390 ce6018269f19eb40a4743323b69b20c2 435 Gene3D G3DSA:1.20.1250.20 241 433 2.8E-22 T 11-10-2018 DB34_13455 0cbf222a7f75794a8388ac2a2db6dba4 527 SUPERFAMILY SSF53448 28 226 2.28E-6 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB34_13455 0cbf222a7f75794a8388ac2a2db6dba4 527 SUPERFAMILY SSF56112 237 439 3.18E-8 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily DB34_13455 0cbf222a7f75794a8388ac2a2db6dba4 527 Gene3D G3DSA:3.90.1200.10 312 461 5.6E-6 T 11-10-2018 DB34_13455 0cbf222a7f75794a8388ac2a2db6dba4 527 Gene3D G3DSA:3.90.550.10 21 260 2.1E-6 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB34_13455 0cbf222a7f75794a8388ac2a2db6dba4 527 Pfam PF01636 Phosphotransferase enzyme family 372 438 2.9E-5 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase DB34_01790 838dd1002d60b373bf4f7c252d053006 304 Gene3D G3DSA:1.10.10.10 5 91 1.2E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB34_01790 838dd1002d60b373bf4f7c252d053006 304 Pfam PF03466 LysR substrate binding domain 91 295 5.4E-37 T 11-10-2018 IPR005119 LysR, substrate-binding DB34_01790 838dd1002d60b373bf4f7c252d053006 304 SUPERFAMILY SSF46785 6 111 8.16E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB34_01790 838dd1002d60b373bf4f7c252d053006 304 Gene3D G3DSA:3.40.190.290 92 299 4.7E-31 T 11-10-2018 DB34_01790 838dd1002d60b373bf4f7c252d053006 304 SUPERFAMILY SSF53850 92 297 1.9E-31 T 11-10-2018 DB34_01790 838dd1002d60b373bf4f7c252d053006 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 64 1.0E-13 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB34_00450 0a582870839050b445dbcad954f8bbbb 695 Gene3D G3DSA:3.40.50.10190 616 695 2.3E-24 T 11-10-2018 IPR036420 BRCT domain superfamily DB34_00450 0a582870839050b445dbcad954f8bbbb 695 Gene3D G3DSA:3.30.470.90 83 331 2.6E-94 T 11-10-2018 DB34_00450 0a582870839050b445dbcad954f8bbbb 695 SUPERFAMILY SSF56091 11 330 1.05E-110 T 11-10-2018 DB34_00450 0a582870839050b445dbcad954f8bbbb 695 SUPERFAMILY SSF52113 617 689 4.11E-17 T 11-10-2018 IPR036420 BRCT domain superfamily DB34_00450 0a582870839050b445dbcad954f8bbbb 695 Gene3D G3DSA:2.40.50.140 332 404 5.4E-34 T 11-10-2018 DB34_00450 0a582870839050b445dbcad954f8bbbb 695 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 336 408 3.3E-34 T 11-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 DB34_00450 0a582870839050b445dbcad954f8bbbb 695 Pfam PF12826 Helix-hairpin-helix motif 527 599 2.7E-9 T 11-10-2018 DB34_00450 0a582870839050b445dbcad954f8bbbb 695 SMART SM00532 15 463 2.3E-237 T 11-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 DB34_00450 0a582870839050b445dbcad954f8bbbb 695 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 620 685 3.8E-10 T 11-10-2018 IPR001357 BRCT domain DB34_00450 0a582870839050b445dbcad954f8bbbb 695 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 15 332 6.4E-112 T 11-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 DB34_00450 0a582870839050b445dbcad954f8bbbb 695 SUPERFAMILY SSF50249 331 408 2.06E-26 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB34_00450 0a582870839050b445dbcad954f8bbbb 695 PIRSF PIRSF001604 9 695 1.6E-227 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 DB34_00450 0a582870839050b445dbcad954f8bbbb 695 Gene3D G3DSA:1.10.287.610 11 82 3.0E-19 T 11-10-2018 DB34_00450 0a582870839050b445dbcad954f8bbbb 695 SMART SM00292 617 694 6.4E-10 T 11-10-2018 IPR001357 BRCT domain DB34_00450 0a582870839050b445dbcad954f8bbbb 695 SUPERFAMILY SSF47781 418 605 4.73E-48 T 11-10-2018 IPR010994 RuvA domain 2-like DB34_00450 0a582870839050b445dbcad954f8bbbb 695 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 345 360 - T 11-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site DB34_00450 0a582870839050b445dbcad954f8bbbb 695 Gene3D G3DSA:2.20.70.80 409 446 1.6E-14 T 11-10-2018 DB34_00450 0a582870839050b445dbcad954f8bbbb 695 Gene3D G3DSA:1.10.150.20 447 521 1.8E-24 T 11-10-2018 DB34_00450 0a582870839050b445dbcad954f8bbbb 695 Hamap MF_01588 DNA ligase [ligA]. 14 691 48.232 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 DB34_00450 0a582870839050b445dbcad954f8bbbb 695 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 422 449 1.4E-11 T 11-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 DB34_00450 0a582870839050b445dbcad954f8bbbb 695 Gene3D G3DSA:1.10.150.20 523 611 5.3E-17 T 11-10-2018 DB34_00450 0a582870839050b445dbcad954f8bbbb 695 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 131 160 - T 11-10-2018 IPR018239 NAD-dependent DNA ligase, active site DB34_00450 0a582870839050b445dbcad954f8bbbb 695 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 23 687 6.2E-224 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 DB34_03710 117cd65decf1873029a2cb454b9ae98d 256 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 1 80 1.0E-4 T 11-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal DB34_03710 117cd65decf1873029a2cb454b9ae98d 256 Gene3D G3DSA:3.40.50.720 1 150 2.8E-27 T 11-10-2018 DB34_03710 117cd65decf1873029a2cb454b9ae98d 256 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 149 254 2.9E-30 T 11-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 DB34_03710 117cd65decf1873029a2cb454b9ae98d 256 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 1 254 21.609 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 DB34_03710 117cd65decf1873029a2cb454b9ae98d 256 PIRSF PIRSF000193 1 256 4.3E-52 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 DB34_03710 117cd65decf1873029a2cb454b9ae98d 256 SUPERFAMILY SSF48179 148 255 1.26E-28 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DB34_03710 117cd65decf1873029a2cb454b9ae98d 256 SUPERFAMILY SSF51735 1 146 3.15E-19 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily DB34_03710 117cd65decf1873029a2cb454b9ae98d 256 Gene3D G3DSA:1.10.3730.10 151 256 1.2E-35 T 11-10-2018 DB34_03710 117cd65decf1873029a2cb454b9ae98d 256 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 1 254 6.3E-62 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 DB34_00245 87abc72d8ca3bbe08d701e9141a4a7a9 77 Pfam PF13156 Restriction endonuclease 34 67 2.6E-6 T 11-10-2018 IPR039442 Mrr-like domain DB34_11025 0a057dc7a08c06bbb00c10bca4831596 483 Pfam PF03929 PepSY-associated TM region 13 378 5.5E-49 T 11-10-2018 IPR005625 PepSY-associated TM protein DB34_05800 343c80d668f9ca4d683c83c2db8281d3 364 Pfam PF06071 Protein of unknown function (DUF933) 280 363 2.7E-37 T 11-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 DB34_05800 343c80d668f9ca4d683c83c2db8281d3 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 3.0E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 DB34_05800 343c80d668f9ca4d683c83c2db8281d3 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 27 45 3.0E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 DB34_05800 343c80d668f9ca4d683c83c2db8281d3 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 71 86 3.0E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 DB34_05800 343c80d668f9ca4d683c83c2db8281d3 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 88 106 3.0E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 DB34_05800 343c80d668f9ca4d683c83c2db8281d3 364 Gene3D G3DSA:1.10.150.300 114 200 2.8E-148 T 11-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 DB34_05800 343c80d668f9ca4d683c83c2db8281d3 364 Gene3D G3DSA:3.10.20.30 49 362 2.8E-148 T 11-10-2018 IPR012675 Beta-grasp domain superfamily DB34_05800 343c80d668f9ca4d683c83c2db8281d3 364 Pfam PF01926 50S ribosome-binding GTPase 5 116 4.4E-24 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 DB34_05800 343c80d668f9ca4d683c83c2db8281d3 364 PIRSF PIRSF006641 1 364 7.9E-155 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 DB34_05800 343c80d668f9ca4d683c83c2db8281d3 364 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 364 5.9E-151 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 DB34_05800 343c80d668f9ca4d683c83c2db8281d3 364 SUPERFAMILY SSF52540 3 302 2.3E-80 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_05800 343c80d668f9ca4d683c83c2db8281d3 364 SUPERFAMILY SSF81271 280 361 9.81E-34 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 DB34_05800 343c80d668f9ca4d683c83c2db8281d3 364 Gene3D G3DSA:3.40.50.300 4 279 2.8E-148 T 11-10-2018 DB34_05800 343c80d668f9ca4d683c83c2db8281d3 364 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 364 43.638 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 DB34_01135 193fe3aff333415b84854b4624730d5f 465 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 291 298 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DB34_01135 193fe3aff333415b84854b4624730d5f 465 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 120 327 1.2E-73 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DB34_01135 193fe3aff333415b84854b4624730d5f 465 SMART SM00878 341 446 1.2E-55 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DB34_01135 193fe3aff333415b84854b4624730d5f 465 Pfam PF00289 Biotin carboxylase, N-terminal domain 7 115 2.4E-44 T 11-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DB34_01135 193fe3aff333415b84854b4624730d5f 465 SUPERFAMILY SSF52440 6 118 2.09E-47 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily DB34_01135 193fe3aff333415b84854b4624730d5f 465 SUPERFAMILY SSF51246 336 449 1.57E-38 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 DB34_01135 193fe3aff333415b84854b4624730d5f 465 Gene3D G3DSA:3.30.1490.20 136 208 8.9E-147 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 DB34_01135 193fe3aff333415b84854b4624730d5f 465 SUPERFAMILY SSF56059 88 351 4.6E-64 T 11-10-2018 DB34_01135 193fe3aff333415b84854b4624730d5f 465 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 8 450 1.5E-197 T 11-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 DB34_01135 193fe3aff333415b84854b4624730d5f 465 Pfam PF02785 Biotin carboxylase C-terminal domain 341 446 1.0E-35 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DB34_01135 193fe3aff333415b84854b4624730d5f 465 Gene3D G3DSA:3.40.50.20 6 90 3.4E-34 T 11-10-2018 DB34_01135 193fe3aff333415b84854b4624730d5f 465 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 159 173 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DB34_01135 193fe3aff333415b84854b4624730d5f 465 Gene3D G3DSA:3.30.470.20 92 438 8.9E-147 T 11-10-2018 DB34_04575 30dec845b8ee314cf65f9ab29c32ef54 544 PRINTS PR00072 Malic enzyme signature 393 409 3.3E-60 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 DB34_04575 30dec845b8ee314cf65f9ab29c32ef54 544 PRINTS PR00072 Malic enzyme signature 81 105 3.3E-60 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 DB34_04575 30dec845b8ee314cf65f9ab29c32ef54 544 PRINTS PR00072 Malic enzyme signature 236 254 3.3E-60 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 DB34_04575 30dec845b8ee314cf65f9ab29c32ef54 544 PRINTS PR00072 Malic enzyme signature 177 199 3.3E-60 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 DB34_04575 30dec845b8ee314cf65f9ab29c32ef54 544 PRINTS PR00072 Malic enzyme signature 141 170 3.3E-60 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 DB34_04575 30dec845b8ee314cf65f9ab29c32ef54 544 PRINTS PR00072 Malic enzyme signature 261 277 3.3E-60 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 DB34_04575 30dec845b8ee314cf65f9ab29c32ef54 544 PRINTS PR00072 Malic enzyme signature 292 308 3.3E-60 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 DB34_04575 30dec845b8ee314cf65f9ab29c32ef54 544 SUPERFAMILY SSF51735 265 542 6.09E-87 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily DB34_04575 30dec845b8ee314cf65f9ab29c32ef54 544 SUPERFAMILY SSF53223 7 264 2.88E-90 T 11-10-2018 DB34_04575 30dec845b8ee314cf65f9ab29c32ef54 544 Gene3D G3DSA:3.40.50.720 263 544 2.3E-103 T 11-10-2018 DB34_04575 30dec845b8ee314cf65f9ab29c32ef54 544 SMART SM00919 265 516 7.1E-92 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 DB34_04575 30dec845b8ee314cf65f9ab29c32ef54 544 SMART SM01274 75 255 2.0E-78 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 DB34_04575 30dec845b8ee314cf65f9ab29c32ef54 544 Pfam PF00390 Malic enzyme, N-terminal domain 76 254 3.9E-61 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 DB34_04575 30dec845b8ee314cf65f9ab29c32ef54 544 PIRSF PIRSF000106 2 544 1.4E-195 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 DB34_04575 30dec845b8ee314cf65f9ab29c32ef54 544 Pfam PF03949 Malic enzyme, NAD binding domain 265 513 3.1E-85 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 DB34_04575 30dec845b8ee314cf65f9ab29c32ef54 544 Gene3D G3DSA:3.40.50.10380 9 262 1.8E-99 T 11-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 DB34_02415 23e989be6c374b01482e387eb6fe00ab 1190 SMART SM01008 187 273 3.1E-17 T 11-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead DB34_02415 23e989be6c374b01482e387eb6fe00ab 1190 Gene3D G3DSA:3.90.1170.50 157 216 9.3E-8 T 11-10-2018 DB34_02415 23e989be6c374b01482e387eb6fe00ab 1190 SUPERFAMILY SSF56003 292 725 2.36E-114 T 11-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 DB34_02415 23e989be6c374b01482e387eb6fe00ab 1190 Gene3D G3DSA:1.10.760.10 1068 1189 1.4E-18 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DB34_02415 23e989be6c374b01482e387eb6fe00ab 1190 SUPERFAMILY SSF46626 940 1055 9.61E-15 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DB34_02415 23e989be6c374b01482e387eb6fe00ab 1190 Gene3D G3DSA:1.10.760.10 920 1067 1.6E-9 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DB34_02415 23e989be6c374b01482e387eb6fe00ab 1190 Gene3D G3DSA:1.10.760.10 772 914 4.5E-11 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DB34_02415 23e989be6c374b01482e387eb6fe00ab 1190 Gene3D G3DSA:3.30.365.10 239 583 2.0E-51 T 11-10-2018 DB34_02415 23e989be6c374b01482e387eb6fe00ab 1190 SUPERFAMILY SSF56003 26 212 3.4E-32 T 11-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 DB34_02415 23e989be6c374b01482e387eb6fe00ab 1190 Gene3D G3DSA:3.30.365.10 22 156 6.4E-30 T 11-10-2018 DB34_02415 23e989be6c374b01482e387eb6fe00ab 1190 SUPERFAMILY SSF54665 188 271 7.32E-8 T 11-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily DB34_02415 23e989be6c374b01482e387eb6fe00ab 1190 SUPERFAMILY SSF46626 788 926 3.92E-22 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DB34_02415 23e989be6c374b01482e387eb6fe00ab 1190 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 293 580 1.2E-31 T 11-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 DB34_02415 23e989be6c374b01482e387eb6fe00ab 1190 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 23 139 3.8E-21 T 11-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 DB34_02415 23e989be6c374b01482e387eb6fe00ab 1190 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 588 669 1.1E-14 T 11-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 DB34_02415 23e989be6c374b01482e387eb6fe00ab 1190 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 1084 1163 1.2E-9 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB34_02415 23e989be6c374b01482e387eb6fe00ab 1190 Gene3D G3DSA:3.30.365.10 584 727 3.8E-41 T 11-10-2018 DB34_02415 23e989be6c374b01482e387eb6fe00ab 1190 Pfam PF00034 Cytochrome c 805 904 2.3E-9 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB34_02415 23e989be6c374b01482e387eb6fe00ab 1190 SUPERFAMILY SSF46626 1084 1173 5.76E-16 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DB34_05990 e3ccd5241b457c88c27435aefec0bf9c 310 Gene3D G3DSA:3.40.50.2020 144 286 4.6E-121 T 11-10-2018 DB34_05990 e3ccd5241b457c88c27435aefec0bf9c 310 SMART SM01400 1 117 3.0E-79 T 11-10-2018 DB34_05990 e3ccd5241b457c88c27435aefec0bf9c 310 Gene3D G3DSA:3.40.50.2020 5 297 4.6E-121 T 11-10-2018 DB34_05990 e3ccd5241b457c88c27435aefec0bf9c 310 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 125 140 - T 11-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 DB34_05990 e3ccd5241b457c88c27435aefec0bf9c 310 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 1 310 2.9E-115 T 11-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 DB34_05990 e3ccd5241b457c88c27435aefec0bf9c 310 SUPERFAMILY SSF53271 66 297 6.25E-59 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like DB34_05990 e3ccd5241b457c88c27435aefec0bf9c 310 Pfam PF00156 Phosphoribosyl transferase domain 151 267 5.4E-22 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 DB34_05990 e3ccd5241b457c88c27435aefec0bf9c 310 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 1 117 4.7E-50 T 11-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 DB34_05990 e3ccd5241b457c88c27435aefec0bf9c 310 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 1 310 47.166 T 11-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 DB34_00135 2c70c6d8b480bccdba6501e6ae16911c 419 Gene3D G3DSA:3.50.50.60 16 334 4.2E-90 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_00135 2c70c6d8b480bccdba6501e6ae16911c 419 Gene3D G3DSA:3.50.50.60 128 269 4.2E-90 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_00135 2c70c6d8b480bccdba6501e6ae16911c 419 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 14 130 5.3E-8 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DB34_00135 2c70c6d8b480bccdba6501e6ae16911c 419 SUPERFAMILY SSF51905 126 269 2.2E-19 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_00135 2c70c6d8b480bccdba6501e6ae16911c 419 SUPERFAMILY SSF51905 14 154 5.81E-25 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_02885 992ba02a7f6f5a20a058410a87ccdffd 154 SUPERFAMILY SSF89919 26 136 1.96E-29 T 11-10-2018 IPR023799 Ribosome-binding factor A domain superfamily DB34_02885 992ba02a7f6f5a20a058410a87ccdffd 154 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 32 118 3.0E-31 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 DB34_02885 992ba02a7f6f5a20a058410a87ccdffd 154 Gene3D G3DSA:3.30.300.20 26 142 5.8E-26 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta DB34_02885 992ba02a7f6f5a20a058410a87ccdffd 154 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 28 134 24.576 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 DB34_02885 992ba02a7f6f5a20a058410a87ccdffd 154 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 28 136 1.2E-20 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 DB34_02885 992ba02a7f6f5a20a058410a87ccdffd 154 Pfam PF02033 Ribosome-binding factor A 29 134 5.6E-26 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 DB34_10550 39c3e3ce0d768b19932cddc9518912b4 193 SUPERFAMILY SSF48498 87 175 2.08E-16 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DB34_10550 39c3e3ce0d768b19932cddc9518912b4 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 66 3.0E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB34_10550 39c3e3ce0d768b19932cddc9518912b4 193 Pfam PF13305 WHG domain 88 168 5.2E-17 T 11-10-2018 IPR025996 WHG domain DB34_10550 39c3e3ce0d768b19932cddc9518912b4 193 SUPERFAMILY SSF46689 9 82 1.95E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB34_10550 39c3e3ce0d768b19932cddc9518912b4 193 Gene3D G3DSA:1.10.357.10 5 190 4.1E-44 T 11-10-2018 DB34_03330 2d96be54388293468d100068c3678444 545 Gene3D G3DSA:3.30.9.90 78 445 8.9E-197 T 11-10-2018 DB34_03330 2d96be54388293468d100068c3678444 545 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 177 192 2.0E-6 T 11-10-2018 DB34_03330 2d96be54388293468d100068c3678444 545 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 12 34 2.0E-6 T 11-10-2018 DB34_03330 2d96be54388293468d100068c3678444 545 SUPERFAMILY SSF54373 209 305 3.61E-36 T 11-10-2018 DB34_03330 2d96be54388293468d100068c3678444 545 Gene3D G3DSA:3.30.70.20 446 539 2.7E-35 T 11-10-2018 DB34_03330 2d96be54388293468d100068c3678444 545 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 441 541 4.3E-47 T 11-10-2018 DB34_03330 2d96be54388293468d100068c3678444 545 SUPERFAMILY SSF51905 7 443 2.2E-55 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_03330 2d96be54388293468d100068c3678444 545 Pfam PF13450 NAD(P)-binding Rossmann-like domain 15 56 7.5E-8 T 11-10-2018 DB34_03330 2d96be54388293468d100068c3678444 545 Gene3D G3DSA:3.50.50.60 10 381 8.9E-197 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_03330 2d96be54388293468d100068c3678444 545 SUPERFAMILY SSF54862 445 542 9.63E-26 T 11-10-2018 DB34_06205 fe346ef6a1d582d724525f8956fd7cf8 434 Gene3D G3DSA:1.10.760.10 7 161 3.9E-12 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DB34_06205 fe346ef6a1d582d724525f8956fd7cf8 434 Gene3D G3DSA:1.10.760.10 162 311 1.1E-6 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DB34_06205 fe346ef6a1d582d724525f8956fd7cf8 434 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 329 410 4.9E-9 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB34_06205 fe346ef6a1d582d724525f8956fd7cf8 434 SUPERFAMILY SSF46626 188 308 1.64E-15 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DB34_06205 fe346ef6a1d582d724525f8956fd7cf8 434 PIRSF PIRSF000018 17 434 2.7E-122 T 11-10-2018 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0016020|GO:0016614|GO:0020037 DB34_06205 fe346ef6a1d582d724525f8956fd7cf8 434 Pfam PF00034 Cytochrome c 51 152 7.8E-6 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB34_06205 fe346ef6a1d582d724525f8956fd7cf8 434 SUPERFAMILY SSF46626 330 415 4.32E-15 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DB34_06205 fe346ef6a1d582d724525f8956fd7cf8 434 Gene3D G3DSA:1.10.760.10 312 434 1.3E-17 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DB34_06205 fe346ef6a1d582d724525f8956fd7cf8 434 SUPERFAMILY SSF46626 48 171 1.35E-18 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DB34_10750 f030202884874b7c22a3ed8dcc18d984 879 Pfam PF00593 TonB dependent receptor 340 871 1.0E-32 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel DB34_10750 f030202884874b7c22a3ed8dcc18d984 879 Gene3D G3DSA:2.40.170.20 311 871 7.1E-47 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DB34_10750 f030202884874b7c22a3ed8dcc18d984 879 Pfam PF07715 TonB-dependent Receptor Plug Domain 91 211 1.6E-22 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain DB34_10750 f030202884874b7c22a3ed8dcc18d984 879 Gene3D G3DSA:2.170.130.10 71 216 8.8E-32 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily DB34_10750 f030202884874b7c22a3ed8dcc18d984 879 SUPERFAMILY SSF56935 76 879 1.59E-91 T 11-10-2018 DB34_02940 e289e346a305a150c738e7db56228816 897 Pfam PF00330 Aconitase family (aconitate hydratase) 79 564 6.0E-181 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DB34_02940 e289e346a305a150c738e7db56228816 897 SUPERFAMILY SSF53732 8 628 1.07E-220 T 11-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 DB34_02940 e289e346a305a150c738e7db56228816 897 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 20 893 0.0 T 11-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 DB34_02940 e289e346a305a150c738e7db56228816 897 Pfam PF00694 Aconitase C-terminal domain 695 822 1.6E-46 T 11-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 DB34_02940 e289e346a305a150c738e7db56228816 897 Gene3D G3DSA:1.10.1440.20 593 655 3.0E-16 T 11-10-2018 DB34_02940 e289e346a305a150c738e7db56228816 897 ProSitePatterns PS01244 Aconitase family signature 2. 495 508 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 DB34_02940 e289e346a305a150c738e7db56228816 897 SUPERFAMILY SSF52016 634 892 3.53E-91 T 11-10-2018 DB34_02940 e289e346a305a150c738e7db56228816 897 Gene3D G3DSA:3.20.19.10 656 895 6.9E-106 T 11-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 DB34_02940 e289e346a305a150c738e7db56228816 897 ProSitePatterns PS00450 Aconitase family signature 1. 429 445 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 DB34_02940 e289e346a305a150c738e7db56228816 897 Gene3D G3DSA:3.30.499.20 7 375 1.5E-157 T 11-10-2018 DB34_02940 e289e346a305a150c738e7db56228816 897 PRINTS PR00415 Aconitase family signature 172 180 2.1E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DB34_02940 e289e346a305a150c738e7db56228816 897 PRINTS PR00415 Aconitase family signature 281 294 2.1E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DB34_02940 e289e346a305a150c738e7db56228816 897 PRINTS PR00415 Aconitase family signature 295 308 2.1E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DB34_02940 e289e346a305a150c738e7db56228816 897 PRINTS PR00415 Aconitase family signature 495 508 2.1E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DB34_02940 e289e346a305a150c738e7db56228816 897 PRINTS PR00415 Aconitase family signature 219 234 2.1E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DB34_02940 e289e346a305a150c738e7db56228816 897 PRINTS PR00415 Aconitase family signature 205 218 2.1E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DB34_02940 e289e346a305a150c738e7db56228816 897 PRINTS PR00415 Aconitase family signature 148 161 2.1E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DB34_02940 e289e346a305a150c738e7db56228816 897 PRINTS PR00415 Aconitase family signature 375 389 2.1E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DB34_02940 e289e346a305a150c738e7db56228816 897 PRINTS PR00415 Aconitase family signature 433 444 2.1E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DB34_02940 e289e346a305a150c738e7db56228816 897 Gene3D G3DSA:3.30.499.10 376 592 4.3E-97 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 DB34_10995 ec221a1340b566c77b31049983341545 818 SUPERFAMILY SSF50998 163 809 2.35E-138 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily DB34_10995 ec221a1340b566c77b31049983341545 818 Gene3D G3DSA:2.140.10.10 159 562 1.4E-107 T 11-10-2018 DB34_10995 ec221a1340b566c77b31049983341545 818 SMART SM00564 733 766 0.26 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat DB34_10995 ec221a1340b566c77b31049983341545 818 SMART SM00564 413 463 240.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat DB34_10995 ec221a1340b566c77b31049983341545 818 SMART SM00564 228 259 1.9E-4 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat DB34_10995 ec221a1340b566c77b31049983341545 818 SMART SM00564 344 385 5.1 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat DB34_10995 ec221a1340b566c77b31049983341545 818 SMART SM00564 658 705 550.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat DB34_10995 ec221a1340b566c77b31049983341545 818 Pfam PF01011 PQQ enzyme repeat 233 260 1.6E-4 T 11-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat DB34_10995 ec221a1340b566c77b31049983341545 818 Pfam PF01011 PQQ enzyme repeat 449 473 9.8E-5 T 11-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat DB34_10995 ec221a1340b566c77b31049983341545 818 Pfam PF01011 PQQ enzyme repeat 739 776 3.3E-6 T 11-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat DB34_10995 ec221a1340b566c77b31049983341545 818 Gene3D G3DSA:2.140.10.10 565 815 4.5E-39 T 11-10-2018 DB34_10995 ec221a1340b566c77b31049983341545 818 TIGRFAM TIGR03074 PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 12 810 4.9E-284 T 11-10-2018 IPR017511 PQQ-dependent membrane bound dehydrogenase GO:0016021|GO:0016614|GO:0048038|GO:0055114 DB34_08910 7e4d455cb6379beaeb55717f0de00b9b 152 Pfam PF03449 Transcription elongation factor, N-terminal 1 69 6.7E-29 T 11-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 DB34_08910 7e4d455cb6379beaeb55717f0de00b9b 152 SUPERFAMILY SSF54534 76 150 1.96E-23 T 11-10-2018 DB34_08910 7e4d455cb6379beaeb55717f0de00b9b 152 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 77 150 1.9E-29 T 11-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 DB34_08910 7e4d455cb6379beaeb55717f0de00b9b 152 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 115 131 - T 11-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 DB34_08910 7e4d455cb6379beaeb55717f0de00b9b 152 PIRSF PIRSF006092 1 152 5.0E-51 T 11-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 DB34_08910 7e4d455cb6379beaeb55717f0de00b9b 152 SUPERFAMILY SSF46557 1 73 4.19E-26 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 DB34_08910 7e4d455cb6379beaeb55717f0de00b9b 152 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 1 150 1.6E-59 T 11-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 DB34_08910 7e4d455cb6379beaeb55717f0de00b9b 152 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 12 43 - T 11-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 DB34_08910 7e4d455cb6379beaeb55717f0de00b9b 152 Gene3D G3DSA:1.10.287.180 1 70 7.4E-29 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 DB34_08910 7e4d455cb6379beaeb55717f0de00b9b 152 Hamap MF_00105 Transcription elongation factor GreA [greA]. 1 150 31.921 T 11-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 DB34_08910 7e4d455cb6379beaeb55717f0de00b9b 152 Gene3D G3DSA:3.10.50.30 73 152 9.8E-29 T 11-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 DB34_09795 0eb651f2892d40c7c3af922ed7548e73 626 Pfam PF01583 Adenylylsulphate kinase 446 599 1.0E-62 T 11-10-2018 DB34_09795 0eb651f2892d40c7c3af922ed7548e73 626 Gene3D G3DSA:3.40.50.300 425 618 5.3E-69 T 11-10-2018 DB34_09795 0eb651f2892d40c7c3af922ed7548e73 626 SUPERFAMILY SSF52540 14 237 6.0E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_09795 0eb651f2892d40c7c3af922ed7548e73 626 SUPERFAMILY SSF52540 444 614 7.85E-33 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_09795 0eb651f2892d40c7c3af922ed7548e73 626 SUPERFAMILY SSF50447 219 309 4.37E-14 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DB34_09795 0eb651f2892d40c7c3af922ed7548e73 626 Gene3D G3DSA:2.40.30.10 224 310 1.2E-17 T 11-10-2018 DB34_09795 0eb651f2892d40c7c3af922ed7548e73 626 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 445 616 35.203 T 11-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 DB34_09795 0eb651f2892d40c7c3af922ed7548e73 626 Pfam PF00009 Elongation factor Tu GTP binding domain 15 208 6.5E-40 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB34_09795 0eb651f2892d40c7c3af922ed7548e73 626 Gene3D G3DSA:3.40.50.300 2 219 8.8E-64 T 11-10-2018 DB34_09795 0eb651f2892d40c7c3af922ed7548e73 626 Gene3D G3DSA:2.40.30.10 312 415 2.9E-18 T 11-10-2018 DB34_09795 0eb651f2892d40c7c3af922ed7548e73 626 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 15 195 2.2E-14 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DB34_09795 0eb651f2892d40c7c3af922ed7548e73 626 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 433 610 2.4E-69 T 11-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 DB34_09795 0eb651f2892d40c7c3af922ed7548e73 626 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 16 412 3.0E-102 T 11-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 DB34_09795 0eb651f2892d40c7c3af922ed7548e73 626 SUPERFAMILY SSF50465 316 415 4.8E-15 T 11-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal DB34_09795 0eb651f2892d40c7c3af922ed7548e73 626 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 65 80 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site DB34_09795 0eb651f2892d40c7c3af922ed7548e73 626 PRINTS PR00315 GTP-binding elongation factor signature 92 102 5.9E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB34_09795 0eb651f2892d40c7c3af922ed7548e73 626 PRINTS PR00315 GTP-binding elongation factor signature 145 154 5.9E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB34_09795 0eb651f2892d40c7c3af922ed7548e73 626 PRINTS PR00315 GTP-binding elongation factor signature 14 27 5.9E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB34_09795 0eb651f2892d40c7c3af922ed7548e73 626 PRINTS PR00315 GTP-binding elongation factor signature 72 80 5.9E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB34_09795 0eb651f2892d40c7c3af922ed7548e73 626 PRINTS PR00315 GTP-binding elongation factor signature 108 119 5.9E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB34_10060 45d777281b8cf7362a67bc4e93faf14d 451 Pfam PF02780 Transketolase, C-terminal domain 321 443 1.5E-42 T 11-10-2018 IPR033248 Transketolase, C-terminal domain DB34_10060 45d777281b8cf7362a67bc4e93faf14d 451 Gene3D G3DSA:3.40.50.970 130 317 2.4E-83 T 11-10-2018 DB34_10060 45d777281b8cf7362a67bc4e93faf14d 451 SMART SM00861 131 306 6.8E-63 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DB34_10060 45d777281b8cf7362a67bc4e93faf14d 451 Gene3D G3DSA:2.40.50.100 1 105 4.5E-33 T 11-10-2018 DB34_10060 45d777281b8cf7362a67bc4e93faf14d 451 Gene3D G3DSA:3.40.50.920 318 451 4.4E-48 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DB34_10060 45d777281b8cf7362a67bc4e93faf14d 451 SUPERFAMILY SSF52518 130 320 5.4E-68 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold DB34_10060 45d777281b8cf7362a67bc4e93faf14d 451 Pfam PF02779 Transketolase, pyrimidine binding domain 130 305 8.6E-49 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DB34_10060 45d777281b8cf7362a67bc4e93faf14d 451 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 DB34_10060 45d777281b8cf7362a67bc4e93faf14d 451 Pfam PF00364 Biotin-requiring enzyme 4 77 6.0E-19 T 11-10-2018 IPR000089 Biotin/lipoyl attachment DB34_10060 45d777281b8cf7362a67bc4e93faf14d 451 SUPERFAMILY SSF51230 1 88 6.54E-28 T 11-10-2018 IPR011053 Single hybrid motif DB34_10060 45d777281b8cf7362a67bc4e93faf14d 451 SUPERFAMILY SSF52922 318 451 2.09E-43 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DB34_10215 2c83918a3768f7bcdbd7de30dd9eaf60 294 Gene3D G3DSA:3.40.50.720 26 291 2.5E-48 T 11-10-2018 DB34_10215 2c83918a3768f7bcdbd7de30dd9eaf60 294 SUPERFAMILY SSF51735 40 287 1.81E-48 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily DB34_10215 2c83918a3768f7bcdbd7de30dd9eaf60 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 115 126 2.8E-16 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_10215 2c83918a3768f7bcdbd7de30dd9eaf60 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 190 209 2.8E-16 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_10215 2c83918a3768f7bcdbd7de30dd9eaf60 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 228 2.8E-16 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_10215 2c83918a3768f7bcdbd7de30dd9eaf60 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 42 59 2.8E-16 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_10215 2c83918a3768f7bcdbd7de30dd9eaf60 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 180 2.8E-16 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_10215 2c83918a3768f7bcdbd7de30dd9eaf60 294 Pfam PF00106 short chain dehydrogenase 43 231 2.6E-33 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_10215 2c83918a3768f7bcdbd7de30dd9eaf60 294 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 41 226 0.0096 T 11-10-2018 DB34_03585 d64299d1993e03332ff97ce36fcdc6a4 344 Gene3D G3DSA:3.20.20.20 62 344 1.4E-100 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DB34_03585 d64299d1993e03332ff97ce36fcdc6a4 344 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 82 340 1.4E-90 T 11-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 DB34_03585 d64299d1993e03332ff97ce36fcdc6a4 344 SUPERFAMILY SSF51717 77 343 1.7E-92 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DB34_03585 d64299d1993e03332ff97ce36fcdc6a4 344 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 83 98 - T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DB34_03585 d64299d1993e03332ff97ce36fcdc6a4 344 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 117 130 - T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DB34_03585 d64299d1993e03332ff97ce36fcdc6a4 344 Pfam PF00809 Pterin binding enzyme 84 326 1.4E-77 T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DB34_00540 48925adee1230e1be46306ed4d39f67a 604 Gene3D G3DSA:3.40.50.970 379 600 1.7E-68 T 11-10-2018 DB34_00540 48925adee1230e1be46306ed4d39f67a 604 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 415 562 7.8E-48 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 DB34_00540 48925adee1230e1be46306ed4d39f67a 604 SUPERFAMILY SSF52467 202 374 1.12E-58 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily DB34_00540 48925adee1230e1be46306ed4d39f67a 604 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 18 584 3.5E-227 T 11-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 DB34_00540 48925adee1230e1be46306ed4d39f67a 604 SUPERFAMILY SSF52518 389 588 3.04E-67 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold DB34_00540 48925adee1230e1be46306ed4d39f67a 604 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 208 343 2.9E-39 T 11-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 DB34_00540 48925adee1230e1be46306ed4d39f67a 604 SUPERFAMILY SSF52518 15 186 5.36E-63 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold DB34_00540 48925adee1230e1be46306ed4d39f67a 604 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 19 180 3.1E-59 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 DB34_00540 48925adee1230e1be46306ed4d39f67a 604 Gene3D G3DSA:3.40.50.970 10 195 1.4E-70 T 11-10-2018 DB34_00540 48925adee1230e1be46306ed4d39f67a 604 Gene3D G3DSA:3.40.50.1220 201 374 3.1E-56 T 11-10-2018 DB34_10840 541fcd7e9006e488cf37998bb68039dc 321 SUPERFAMILY SSF52317 6 195 2.68E-39 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like DB34_10840 541fcd7e9006e488cf37998bb68039dc 321 Pfam PF12833 Helix-turn-helix domain 237 316 2.0E-19 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB34_10840 541fcd7e9006e488cf37998bb68039dc 321 SUPERFAMILY SSF46689 268 317 8.96E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB34_10840 541fcd7e9006e488cf37998bb68039dc 321 Gene3D G3DSA:1.10.10.60 215 319 6.2E-23 T 11-10-2018 DB34_10840 541fcd7e9006e488cf37998bb68039dc 321 SMART SM00342 231 314 2.4E-22 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB34_10840 541fcd7e9006e488cf37998bb68039dc 321 Pfam PF01965 DJ-1/PfpI family 6 175 1.8E-16 T 11-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 DB34_10840 541fcd7e9006e488cf37998bb68039dc 321 SUPERFAMILY SSF46689 216 264 8.15E-5 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB34_10840 541fcd7e9006e488cf37998bb68039dc 321 Gene3D G3DSA:3.40.50.880 2 204 6.1E-48 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like DB34_11175 3cdd2805e51fa82cabd660bf01f700fe 312 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 231 243 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site DB34_11175 3cdd2805e51fa82cabd660bf01f700fe 312 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 99 115 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site DB34_11175 3cdd2805e51fa82cabd660bf01f700fe 312 SUPERFAMILY SSF48576 30 306 1.8E-81 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily DB34_11175 3cdd2805e51fa82cabd660bf01f700fe 312 Gene3D G3DSA:1.10.600.10 20 312 4.5E-96 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily DB34_11175 3cdd2805e51fa82cabd660bf01f700fe 312 Pfam PF00348 Polyprenyl synthetase 50 287 6.7E-58 T 11-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 DB34_01930 67b1c38df9e977129a4ff760f3266167 264 SUPERFAMILY SSF81345 3 254 2.88E-30 T 11-10-2018 IPR037294 ABC transporter, BtuC-like DB34_01930 67b1c38df9e977129a4ff760f3266167 264 Pfam PF00950 ABC 3 transport family 4 258 1.1E-41 T 11-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 DB34_01930 67b1c38df9e977129a4ff760f3266167 264 Gene3D G3DSA:1.10.3470.10 29 261 2.8E-6 T 11-10-2018 IPR037294 ABC transporter, BtuC-like DB34_12430 c0fa8e6f3b73cd3a929d44b90637ec3f 415 PIRSF PIRSF005572 31 413 3.2E-48 T 11-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 DB34_12430 c0fa8e6f3b73cd3a929d44b90637ec3f 415 Pfam PF00266 Aminotransferase class-V 34 403 1.7E-142 T 11-10-2018 IPR000192 Aminotransferase class V domain DB34_12430 c0fa8e6f3b73cd3a929d44b90637ec3f 415 Gene3D G3DSA:3.90.1150.10 17 406 8.5E-169 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB34_12430 c0fa8e6f3b73cd3a929d44b90637ec3f 415 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 16 414 7.1E-169 T 11-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 DB34_12430 c0fa8e6f3b73cd3a929d44b90637ec3f 415 Gene3D G3DSA:3.40.640.10 45 305 8.5E-169 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB34_12430 c0fa8e6f3b73cd3a929d44b90637ec3f 415 SUPERFAMILY SSF53383 14 411 7.29E-120 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB34_12690 beab92eee8276db38964254f2dbc9182 207 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 201 39.027 T 11-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 DB34_12690 beab92eee8276db38964254f2dbc9182 207 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 187 2.0E-73 T 11-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 DB34_12690 beab92eee8276db38964254f2dbc9182 207 Pfam PF00694 Aconitase C-terminal domain 1 123 1.8E-34 T 11-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 DB34_12690 beab92eee8276db38964254f2dbc9182 207 SUPERFAMILY SSF52016 1 191 1.26E-56 T 11-10-2018 DB34_12690 beab92eee8276db38964254f2dbc9182 207 Gene3D G3DSA:3.20.19.10 1 175 1.3E-72 T 11-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 DB34_03275 a29a062ed458bcb3c1df61fa4a6b9c72 337 SUPERFAMILY SSF48019 214 322 8.16E-15 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 DB34_03275 a29a062ed458bcb3c1df61fa4a6b9c72 337 Gene3D G3DSA:3.40.50.300 10 127 9.3E-13 T 11-10-2018 DB34_03275 a29a062ed458bcb3c1df61fa4a6b9c72 337 Pfam PF06144 DNA polymerase III, delta subunit 22 183 5.3E-15 T 11-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 DB34_03275 a29a062ed458bcb3c1df61fa4a6b9c72 337 Gene3D G3DSA:1.20.272.10 210 333 4.8E-10 T 11-10-2018 DB34_03275 a29a062ed458bcb3c1df61fa4a6b9c72 337 Gene3D G3DSA:1.10.8.60 138 204 9.9E-10 T 11-10-2018 DB34_03275 a29a062ed458bcb3c1df61fa4a6b9c72 337 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 20 316 5.4E-48 T 11-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 DB34_03275 a29a062ed458bcb3c1df61fa4a6b9c72 337 SUPERFAMILY SSF52540 1 202 6.15E-17 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_01840 9e1cb84914d37739ad294587e55d9075 184 SUPERFAMILY SSF52540 17 180 5.82E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_01840 9e1cb84914d37739ad294587e55d9075 184 Gene3D G3DSA:3.40.50.300 16 180 1.7E-51 T 11-10-2018 DB34_01840 9e1cb84914d37739ad294587e55d9075 184 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 17 178 2.0E-57 T 11-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 DB34_01840 9e1cb84914d37739ad294587e55d9075 184 PIRSF PIRSF006135 15 182 8.1E-51 T 11-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 DB34_12545 ec193f6b2835613eb329c3ac086d2f7d 322 Gene3D G3DSA:1.10.357.140 39 201 6.8E-19 T 11-10-2018 DB34_12545 ec193f6b2835613eb329c3ac086d2f7d 322 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 31 315 3.5E-98 T 11-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 DB34_12545 ec193f6b2835613eb329c3ac086d2f7d 322 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 82 104 - T 11-10-2018 IPR030470 UbiA prenyltransferase conserved site DB34_12545 ec193f6b2835613eb329c3ac086d2f7d 322 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 28 317 19.468 T 11-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 DB34_12545 ec193f6b2835613eb329c3ac086d2f7d 322 Pfam PF01040 UbiA prenyltransferase family 45 282 7.2E-57 T 11-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 DB34_00165 4070b55df48e65412e1d89a24c2caa51 447 Gene3D G3DSA:3.90.870.10 7 220 2.2E-87 T 11-10-2018 DB34_00165 4070b55df48e65412e1d89a24c2caa51 447 Pfam PF00925 GTP cyclohydrolase II 244 408 4.8E-60 T 11-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 DB34_00165 4070b55df48e65412e1d89a24c2caa51 447 SUPERFAMILY SSF142695 242 411 3.14E-53 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 DB34_00165 4070b55df48e65412e1d89a24c2caa51 447 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 21 212 2.0E-83 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DB34_00165 4070b55df48e65412e1d89a24c2caa51 447 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 18 212 9.2E-76 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DB34_00165 4070b55df48e65412e1d89a24c2caa51 447 SUPERFAMILY SSF55821 18 215 1.58E-82 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily DB34_00165 4070b55df48e65412e1d89a24c2caa51 447 PIRSF PIRSF001259 15 442 1.1E-145 T 11-10-2018 DB34_00165 4070b55df48e65412e1d89a24c2caa51 447 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 14 218 40.418 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DB34_00165 4070b55df48e65412e1d89a24c2caa51 447 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 237 435 37.437 T 11-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 DB34_00165 4070b55df48e65412e1d89a24c2caa51 447 Gene3D G3DSA:3.40.50.10990 238 412 6.1E-62 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 DB34_00165 4070b55df48e65412e1d89a24c2caa51 447 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 243 433 1.0E-64 T 11-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 DB34_00920 c29cdc9352ce28ff4ced3d486e9d3fed 430 Gene3D G3DSA:3.30.2320.10 287 421 5.9E-23 T 11-10-2018 DB34_00920 c29cdc9352ce28ff4ced3d486e9d3fed 430 Gene3D G3DSA:3.30.2400.10 192 417 5.9E-23 T 11-10-2018 DB34_00920 c29cdc9352ce28ff4ced3d486e9d3fed 430 SUPERFAMILY SSF56563 151 426 8.37E-52 T 11-10-2018 DB34_00920 c29cdc9352ce28ff4ced3d486e9d3fed 430 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 3 426 1.2E-56 T 11-10-2018 IPR024455 Phage capsid DB34_00920 c29cdc9352ce28ff4ced3d486e9d3fed 430 Pfam PF05065 Phage capsid family 159 423 1.9E-45 T 11-10-2018 IPR024455 Phage capsid DB34_05165 936e611c67a379b2fc11cc56dbd7cc4b 252 Pfam PF05118 Aspartyl/Asparaginyl beta-hydroxylase 55 210 2.5E-46 T 11-10-2018 IPR007803 Aspartyl/asparaginy/proline hydroxylase GO:0018193 DB34_05165 936e611c67a379b2fc11cc56dbd7cc4b 252 Gene3D G3DSA:2.60.120.330 34 214 7.5E-52 T 11-10-2018 IPR027443 Isopenicillin N synthase-like DB34_05165 936e611c67a379b2fc11cc56dbd7cc4b 252 SUPERFAMILY SSF51197 81 221 1.02E-14 T 11-10-2018 DB34_01725 8dd6bdd65da30ae744ed8eb97dc3cace 411 Gene3D G3DSA:1.10.540.10 31 136 7.8E-17 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 DB34_01725 8dd6bdd65da30ae744ed8eb97dc3cace 411 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 137 224 3.1E-10 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 DB34_01725 8dd6bdd65da30ae744ed8eb97dc3cace 411 SUPERFAMILY SSF47203 244 383 4.42E-10 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 DB34_01725 8dd6bdd65da30ae744ed8eb97dc3cace 411 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 250 382 4.2E-12 T 11-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain DB34_01725 8dd6bdd65da30ae744ed8eb97dc3cace 411 Gene3D G3DSA:2.40.110.10 137 232 2.4E-27 T 11-10-2018 DB34_01725 8dd6bdd65da30ae744ed8eb97dc3cace 411 Gene3D G3DSA:1.20.140.10 233 408 4.6E-51 T 11-10-2018 DB34_01725 8dd6bdd65da30ae744ed8eb97dc3cace 411 SUPERFAMILY SSF56645 35 230 1.16E-39 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 DB34_01725 8dd6bdd65da30ae744ed8eb97dc3cace 411 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 39 113 5.6E-5 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 DB34_01725 8dd6bdd65da30ae744ed8eb97dc3cace 411 PIRSF PIRSF016578 8 391 4.8E-27 T 11-10-2018 DB34_10165 08e6ba5771035cd0816f27b9120d0fa9 582 Gene3D G3DSA:1.10.3720.10 373 570 3.3E-10 T 11-10-2018 IPR035906 MetI-like superfamily DB34_10165 08e6ba5771035cd0816f27b9120d0fa9 582 Gene3D G3DSA:1.10.3720.10 64 271 1.0E-25 T 11-10-2018 IPR035906 MetI-like superfamily DB34_10165 08e6ba5771035cd0816f27b9120d0fa9 582 SUPERFAMILY SSF161098 69 263 4.97E-22 T 11-10-2018 IPR035906 MetI-like superfamily DB34_10165 08e6ba5771035cd0816f27b9120d0fa9 582 SUPERFAMILY SSF161098 377 563 4.97E-11 T 11-10-2018 IPR035906 MetI-like superfamily DB34_10165 08e6ba5771035cd0816f27b9120d0fa9 582 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 396 580 2.7E-10 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB34_10165 08e6ba5771035cd0816f27b9120d0fa9 582 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 262 1.5E-15 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB34_02345 a9a34a8cfdc29592e51ad80a9ac6ad88 563 Gene3D G3DSA:3.30.750.24 438 556 7.3E-29 T 11-10-2018 IPR036513 STAS domain superfamily DB34_02345 a9a34a8cfdc29592e51ad80a9ac6ad88 563 Pfam PF00916 Sulfate permease family 22 388 6.6E-69 T 11-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 DB34_02345 a9a34a8cfdc29592e51ad80a9ac6ad88 563 Pfam PF01740 STAS domain 446 549 6.6E-16 T 11-10-2018 IPR002645 STAS domain DB34_02345 a9a34a8cfdc29592e51ad80a9ac6ad88 563 SUPERFAMILY SSF52091 444 554 1.84E-14 T 11-10-2018 IPR036513 STAS domain superfamily DB34_05750 3b67652f12b2d8e3cdeef7f0057aac98 420 Pfam PF07690 Major Facilitator Superfamily 32 371 1.6E-34 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DB34_05750 3b67652f12b2d8e3cdeef7f0057aac98 420 Gene3D G3DSA:1.20.1250.20 233 414 3.5E-19 T 11-10-2018 DB34_05750 3b67652f12b2d8e3cdeef7f0057aac98 420 ProSitePatterns PS00217 Sugar transport proteins signature 2. 123 148 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 DB34_05750 3b67652f12b2d8e3cdeef7f0057aac98 420 Gene3D G3DSA:1.20.1250.20 26 232 4.4E-39 T 11-10-2018 DB34_05750 3b67652f12b2d8e3cdeef7f0057aac98 420 SUPERFAMILY SSF103473 25 413 8.5E-66 T 11-10-2018 IPR036259 MFS transporter superfamily DB34_03610 6238fa36e7b28d17fca1cc12a99f1c7b 454 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 45 450 1.3E-119 T 11-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 DB34_03610 6238fa36e7b28d17fca1cc12a99f1c7b 454 SUPERFAMILY SSF69304 172 451 7.98E-56 T 11-10-2018 DB34_03610 6238fa36e7b28d17fca1cc12a99f1c7b 454 Gene3D G3DSA:2.120.10.30 181 453 2.0E-76 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like DB34_03610 6238fa36e7b28d17fca1cc12a99f1c7b 454 SUPERFAMILY SSF52964 60 177 2.35E-28 T 11-10-2018 DB34_03610 6238fa36e7b28d17fca1cc12a99f1c7b 454 Pfam PF04052 TolB amino-terminal domain 53 145 6.2E-17 T 11-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 DB34_03610 6238fa36e7b28d17fca1cc12a99f1c7b 454 Gene3D G3DSA:3.40.50.10070 49 180 1.9E-25 T 11-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 DB34_03610 6238fa36e7b28d17fca1cc12a99f1c7b 454 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 33 449 46.289 T 11-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 DB34_03610 6238fa36e7b28d17fca1cc12a99f1c7b 454 Pfam PF07676 WD40-like Beta Propeller Repeat 342 368 0.001 T 11-10-2018 IPR011659 WD40-like Beta Propeller DB34_03610 6238fa36e7b28d17fca1cc12a99f1c7b 454 Pfam PF07676 WD40-like Beta Propeller Repeat 298 333 6.0E-12 T 11-10-2018 IPR011659 WD40-like Beta Propeller DB34_03610 6238fa36e7b28d17fca1cc12a99f1c7b 454 Pfam PF07676 WD40-like Beta Propeller Repeat 259 289 2.7E-5 T 11-10-2018 IPR011659 WD40-like Beta Propeller DB34_12130 be3b8116a0c13009209f6c4c54122485 245 SUPERFAMILY SSF53639 5 224 1.84E-58 T 11-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily DB34_12130 be3b8116a0c13009209f6c4c54122485 245 SMART SM01007 12 194 1.5E-57 T 11-10-2018 IPR001303 Class II aldolase/adducin N-terminal DB34_12130 be3b8116a0c13009209f6c4c54122485 245 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 13 194 5.1E-45 T 11-10-2018 IPR001303 Class II aldolase/adducin N-terminal DB34_12130 be3b8116a0c13009209f6c4c54122485 245 Gene3D G3DSA:3.40.225.10 1 245 2.2E-74 T 11-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily DB34_05175 000a68d771c72ade95c6700b9a7becc1 357 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 12 356 2.3E-108 T 11-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 DB34_05175 000a68d771c72ade95c6700b9a7becc1 357 SUPERFAMILY SSF51395 10 356 1.62E-102 T 11-10-2018 DB34_05175 000a68d771c72ade95c6700b9a7becc1 357 Pfam PF01180 Dihydroorotate dehydrogenase 45 341 1.9E-83 T 11-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 DB34_05175 000a68d771c72ade95c6700b9a7becc1 357 Gene3D G3DSA:3.20.20.70 4 357 2.7E-133 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB34_05175 000a68d771c72ade95c6700b9a7becc1 357 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 80 99 - T 11-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 DB34_08800 c002c018cb70f6028b777dbb439553e8 1063 SUPERFAMILY SSF82693 562 659 1.49E-13 T 11-10-2018 DB34_08800 c002c018cb70f6028b777dbb439553e8 1063 Pfam PF00873 AcrB/AcrD/AcrF family 4 1034 1.5E-303 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DB34_08800 c002c018cb70f6028b777dbb439553e8 1063 SUPERFAMILY SSF82866 290 489 1.96E-44 T 11-10-2018 DB34_08800 c002c018cb70f6028b777dbb439553e8 1063 Gene3D G3DSA:3.30.70.1430 40 823 3.4E-277 T 11-10-2018 DB34_08800 c002c018cb70f6028b777dbb439553e8 1063 SUPERFAMILY SSF82714 716 784 8.5E-10 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DB34_08800 c002c018cb70f6028b777dbb439553e8 1063 Gene3D G3DSA:3.30.70.1440 660 873 3.4E-277 T 11-10-2018 DB34_08800 c002c018cb70f6028b777dbb439553e8 1063 Gene3D G3DSA:1.20.1640.10 10 506 3.4E-277 T 11-10-2018 DB34_08800 c002c018cb70f6028b777dbb439553e8 1063 SUPERFAMILY SSF82693 40 130 4.45E-23 T 11-10-2018 DB34_08800 c002c018cb70f6028b777dbb439553e8 1063 Gene3D G3DSA:3.30.2090.10 179 269 3.4E-277 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DB34_08800 c002c018cb70f6028b777dbb439553e8 1063 Gene3D G3DSA:3.30.2090.10 712 815 3.4E-277 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DB34_08800 c002c018cb70f6028b777dbb439553e8 1063 SUPERFAMILY SSF82693 136 324 9.03E-22 T 11-10-2018 DB34_08800 c002c018cb70f6028b777dbb439553e8 1063 SUPERFAMILY SSF82866 814 1035 8.63E-43 T 11-10-2018 DB34_08800 c002c018cb70f6028b777dbb439553e8 1063 SUPERFAMILY SSF82714 184 266 1.96E-13 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DB34_08800 c002c018cb70f6028b777dbb439553e8 1063 Gene3D G3DSA:3.30.70.1430 564 659 3.4E-277 T 11-10-2018 DB34_08800 c002c018cb70f6028b777dbb439553e8 1063 Gene3D G3DSA:1.20.1640.10 507 1031 3.4E-277 T 11-10-2018 DB34_08800 c002c018cb70f6028b777dbb439553e8 1063 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 6.5E-71 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DB34_08800 c002c018cb70f6028b777dbb439553e8 1063 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 6.5E-71 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DB34_08800 c002c018cb70f6028b777dbb439553e8 1063 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 6.5E-71 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DB34_08800 c002c018cb70f6028b777dbb439553e8 1063 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 6.5E-71 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DB34_08800 c002c018cb70f6028b777dbb439553e8 1063 PRINTS PR00702 Acriflavin resistance protein family signature 549 566 6.5E-71 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DB34_08800 c002c018cb70f6028b777dbb439553e8 1063 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 6.5E-71 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DB34_08800 c002c018cb70f6028b777dbb439553e8 1063 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 6.5E-71 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DB34_08800 c002c018cb70f6028b777dbb439553e8 1063 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 6.5E-71 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DB34_08800 c002c018cb70f6028b777dbb439553e8 1063 PRINTS PR00702 Acriflavin resistance protein family signature 616 630 6.5E-71 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DB34_08800 c002c018cb70f6028b777dbb439553e8 1063 Gene3D G3DSA:3.30.70.1320 135 326 3.4E-277 T 11-10-2018 DB34_02465 b5c6db054bd3d364ba50e7ac2de1e495 324 Gene3D G3DSA:3.40.50.720 4 303 2.8E-93 T 11-10-2018 DB34_02465 b5c6db054bd3d364ba50e7ac2de1e495 324 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 311 3.4E-53 T 11-10-2018 IPR016040 NAD(P)-binding domain DB34_02465 b5c6db054bd3d364ba50e7ac2de1e495 324 Gene3D G3DSA:3.90.25.10 182 315 2.8E-93 T 11-10-2018 DB34_02465 b5c6db054bd3d364ba50e7ac2de1e495 324 SUPERFAMILY SSF51735 2 319 6.67E-84 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily DB34_02465 b5c6db054bd3d364ba50e7ac2de1e495 324 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 1.5E-20 T 11-10-2018 DB34_02465 b5c6db054bd3d364ba50e7ac2de1e495 324 PRINTS PR01713 Nucleotide sugar epimerase signature 282 299 1.5E-20 T 11-10-2018 DB34_02465 b5c6db054bd3d364ba50e7ac2de1e495 324 PRINTS PR01713 Nucleotide sugar epimerase signature 218 233 1.5E-20 T 11-10-2018 DB34_02465 b5c6db054bd3d364ba50e7ac2de1e495 324 PRINTS PR01713 Nucleotide sugar epimerase signature 243 258 1.5E-20 T 11-10-2018 DB34_07895 d09c73d961f7b447d161f6cbd60b85cb 571 Gene3D G3DSA:3.30.750.44 178 456 1.9E-66 T 11-10-2018 DB34_07895 d09c73d961f7b447d161f6cbd60b85cb 571 Gene3D G3DSA:3.90.226.10 306 477 1.9E-66 T 11-10-2018 DB34_07895 d09c73d961f7b447d161f6cbd60b85cb 571 Pfam PF03572 Peptidase family S41 317 478 2.3E-36 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 DB34_07895 d09c73d961f7b447d161f6cbd60b85cb 571 SUPERFAMILY SSF50156 193 309 1.73E-13 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 DB34_07895 d09c73d961f7b447d161f6cbd60b85cb 571 SMART SM00245 292 481 7.5E-31 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 DB34_07895 d09c73d961f7b447d161f6cbd60b85cb 571 SUPERFAMILY SSF52096 176 486 1.99E-51 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DB34_07895 d09c73d961f7b447d161f6cbd60b85cb 571 SMART SM00228 219 290 1.2E-5 T 11-10-2018 IPR001478 PDZ domain GO:0005515 DB34_07895 d09c73d961f7b447d161f6cbd60b85cb 571 Gene3D G3DSA:2.30.42.10 219 305 1.9E-66 T 11-10-2018 DB34_05710 7c997ee193144965e949245b5b7cdd05 261 SMART SM00477 56 245 4.1E-24 T 11-10-2018 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 DB34_05710 7c997ee193144965e949245b5b7cdd05 261 SMART SM00892 55 245 3.2E-31 T 11-10-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 DB34_05710 7c997ee193144965e949245b5b7cdd05 261 Gene3D G3DSA:3.40.570.10 36 254 1.0E-47 T 11-10-2018 DB34_05710 7c997ee193144965e949245b5b7cdd05 261 Pfam PF01223 DNA/RNA non-specific endonuclease 50 244 2.0E-40 T 11-10-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 DB34_05710 7c997ee193144965e949245b5b7cdd05 261 SUPERFAMILY SSF54060 30 254 1.35E-54 T 11-10-2018 DB34_05095 74b885c1ee009251a76d0f6cd474e03b 914 SUPERFAMILY SSF63411 742 912 1.2E-29 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 DB34_05095 74b885c1ee009251a76d0f6cd474e03b 914 Gene3D G3DSA:3.30.830.10 509 710 1.4E-27 T 11-10-2018 DB34_05095 74b885c1ee009251a76d0f6cd474e03b 914 Gene3D G3DSA:3.30.830.10 275 466 6.3E-24 T 11-10-2018 DB34_05095 74b885c1ee009251a76d0f6cd474e03b 914 SUPERFAMILY SSF63411 278 462 3.67E-20 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 DB34_05095 74b885c1ee009251a76d0f6cd474e03b 914 Pfam PF05193 Peptidase M16 inactive domain 221 391 1.2E-17 T 11-10-2018 IPR007863 Peptidase M16, C-terminal DB34_05095 74b885c1ee009251a76d0f6cd474e03b 914 Pfam PF05193 Peptidase M16 inactive domain 664 844 6.5E-31 T 11-10-2018 IPR007863 Peptidase M16, C-terminal DB34_05095 74b885c1ee009251a76d0f6cd474e03b 914 Pfam PF00675 Insulinase (Peptidase family M16) 74 213 7.2E-19 T 11-10-2018 IPR011765 Peptidase M16, N-terminal DB34_05095 74b885c1ee009251a76d0f6cd474e03b 914 SUPERFAMILY SSF63411 508 704 7.68E-27 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 DB34_05095 74b885c1ee009251a76d0f6cd474e03b 914 SUPERFAMILY SSF63411 52 259 3.32E-53 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 DB34_05095 74b885c1ee009251a76d0f6cd474e03b 914 Gene3D G3DSA:3.30.830.10 721 912 3.1E-38 T 11-10-2018 DB34_05095 74b885c1ee009251a76d0f6cd474e03b 914 Gene3D G3DSA:3.30.830.10 52 273 5.2E-63 T 11-10-2018 DB34_09360 14801fd863e763072a4636fcaa2f6291 314 SMART SM00116 85 134 1.7 T 11-10-2018 IPR000644 CBS domain DB34_09360 14801fd863e763072a4636fcaa2f6291 314 SMART SM00116 147 195 8.0 T 11-10-2018 IPR000644 CBS domain DB34_09360 14801fd863e763072a4636fcaa2f6291 314 Pfam PF03471 Transporter associated domain 213 293 4.4E-17 T 11-10-2018 IPR005170 Transporter-associated domain DB34_09360 14801fd863e763072a4636fcaa2f6291 314 Gene3D G3DSA:3.10.580.10 56 205 1.1E-53 T 11-10-2018 DB34_09360 14801fd863e763072a4636fcaa2f6291 314 Pfam PF00571 CBS domain 82 133 3.6E-7 T 11-10-2018 IPR000644 CBS domain DB34_09360 14801fd863e763072a4636fcaa2f6291 314 Pfam PF00571 CBS domain 143 195 1.0E-6 T 11-10-2018 IPR000644 CBS domain DB34_09360 14801fd863e763072a4636fcaa2f6291 314 SMART SM01091 211 294 2.7E-25 T 11-10-2018 IPR005170 Transporter-associated domain DB34_09360 14801fd863e763072a4636fcaa2f6291 314 SUPERFAMILY SSF54631 71 206 6.32E-32 T 11-10-2018 DB34_09360 14801fd863e763072a4636fcaa2f6291 314 SUPERFAMILY SSF56176 210 298 1.31E-18 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 DB34_09360 14801fd863e763072a4636fcaa2f6291 314 Gene3D G3DSA:3.30.465.10 208 295 1.0E-25 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 DB34_08935 6a36353bea2c24b3486941a590e52542 663 Gene3D G3DSA:1.10.220.120 22 83 3.3E-22 T 11-10-2018 DB34_08935 6a36353bea2c24b3486941a590e52542 663 SUPERFAMILY SSF88946 143 495 3.14E-93 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DB34_08935 6a36353bea2c24b3486941a590e52542 663 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 621 647 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB34_08935 6a36353bea2c24b3486941a590e52542 663 Gene3D G3DSA:1.10.10.10 578 662 4.2E-37 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB34_08935 6a36353bea2c24b3486941a590e52542 663 Gene3D G3DSA:1.10.601.10 141 497 3.8E-113 T 11-10-2018 DB34_08935 6a36353bea2c24b3486941a590e52542 663 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 424 660 3.3E-120 T 11-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 DB34_08935 6a36353bea2c24b3486941a590e52542 663 SUPERFAMILY SSF88659 558 660 3.14E-26 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DB34_08935 6a36353bea2c24b3486941a590e52542 663 Pfam PF03979 Sigma-70 factor, region 1.1 23 101 7.3E-24 T 11-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 DB34_08935 6a36353bea2c24b3486941a590e52542 663 Pfam PF04546 Sigma-70, non-essential region 168 396 2.5E-44 T 11-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DB34_08935 6a36353bea2c24b3486941a590e52542 663 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 452 465 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB34_08935 6a36353bea2c24b3486941a590e52542 663 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 424 649 1.3E-38 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DB34_08935 6a36353bea2c24b3486941a590e52542 663 SUPERFAMILY SSF88659 501 574 7.85E-21 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DB34_08935 6a36353bea2c24b3486941a590e52542 663 Pfam PF00140 Sigma-70 factor, region 1.2 126 158 3.3E-13 T 11-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DB34_08935 6a36353bea2c24b3486941a590e52542 663 Gene3D G3DSA:1.10.10.10 501 577 2.7E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB34_08935 6a36353bea2c24b3486941a590e52542 663 Pfam PF04542 Sigma-70 region 2 428 497 2.0E-21 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DB34_08935 6a36353bea2c24b3486941a590e52542 663 PRINTS PR00046 Major sigma-70 factor signature 636 647 3.7E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB34_08935 6a36353bea2c24b3486941a590e52542 663 PRINTS PR00046 Major sigma-70 factor signature 621 636 3.7E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB34_08935 6a36353bea2c24b3486941a590e52542 663 PRINTS PR00046 Major sigma-70 factor signature 476 484 3.7E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB34_08935 6a36353bea2c24b3486941a590e52542 663 PRINTS PR00046 Major sigma-70 factor signature 600 612 3.7E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB34_08935 6a36353bea2c24b3486941a590e52542 663 PRINTS PR00046 Major sigma-70 factor signature 452 465 3.7E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB34_08935 6a36353bea2c24b3486941a590e52542 663 Pfam PF04545 Sigma-70, region 4 596 649 3.6E-19 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 DB34_08935 6a36353bea2c24b3486941a590e52542 663 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 23 661 43.382 T 11-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 DB34_08935 6a36353bea2c24b3486941a590e52542 663 Pfam PF04539 Sigma-70 region 3 507 580 1.9E-28 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 DB34_08590 c4cbb4433de1854b87097d54acdd45cc 230 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 226 1.1E-102 T 11-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 DB34_08590 c4cbb4433de1854b87097d54acdd45cc 230 Gene3D G3DSA:3.40.50.790 67 158 5.0E-83 T 11-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich DB34_08590 c4cbb4433de1854b87097d54acdd45cc 230 PIRSF PIRSF002155 1 226 1.4E-76 T 11-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_08590 c4cbb4433de1854b87097d54acdd45cc 230 ProSitePatterns PS01199 Ribosomal protein L1 signature. 119 138 - T 11-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_08590 c4cbb4433de1854b87097d54acdd45cc 230 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 228 43.621 T 11-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 DB34_08590 c4cbb4433de1854b87097d54acdd45cc 230 SUPERFAMILY SSF56808 5 225 1.12E-82 T 11-10-2018 IPR023674 Ribosomal protein L1-like DB34_08590 c4cbb4433de1854b87097d54acdd45cc 230 Pfam PF00687 Ribosomal protein L1p/L10e family 30 219 7.4E-56 T 11-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein DB34_08590 c4cbb4433de1854b87097d54acdd45cc 230 Gene3D G3DSA:3.30.190.20 20 224 5.0E-83 T 11-10-2018 DB34_07265 31e87e9d32d530c0f5e32ab07f2c2d3c 391 Gene3D G3DSA:3.90.1150.10 15 378 5.4E-134 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB34_07265 31e87e9d32d530c0f5e32ab07f2c2d3c 391 Pfam PF00155 Aminotransferase class I and II 28 382 2.3E-58 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DB34_07265 31e87e9d32d530c0f5e32ab07f2c2d3c 391 Gene3D G3DSA:3.40.640.10 43 279 5.4E-134 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB34_07265 31e87e9d32d530c0f5e32ab07f2c2d3c 391 SUPERFAMILY SSF53383 5 386 1.71E-98 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB34_01430 2c997ab478684573c0d1cc072725b11e 296 PRINTS PR00046 Major sigma-70 factor signature 99 107 3.8E-21 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB34_01430 2c997ab478684573c0d1cc072725b11e 296 PRINTS PR00046 Major sigma-70 factor signature 75 88 3.8E-21 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB34_01430 2c997ab478684573c0d1cc072725b11e 296 PRINTS PR00046 Major sigma-70 factor signature 266 277 3.8E-21 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB34_01430 2c997ab478684573c0d1cc072725b11e 296 PRINTS PR00046 Major sigma-70 factor signature 232 244 3.8E-21 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB34_01430 2c997ab478684573c0d1cc072725b11e 296 PRINTS PR00046 Major sigma-70 factor signature 251 266 3.8E-21 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB34_01430 2c997ab478684573c0d1cc072725b11e 296 Pfam PF04545 Sigma-70, region 4 228 278 2.3E-16 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 DB34_01430 2c997ab478684573c0d1cc072725b11e 296 Gene3D G3DSA:1.10.601.10 10 118 1.4E-31 T 11-10-2018 DB34_01430 2c997ab478684573c0d1cc072725b11e 296 PIRSF PIRSF000770 4 295 1.3E-41 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB34_01430 2c997ab478684573c0d1cc072725b11e 296 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 13 282 4.3E-112 T 11-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 DB34_01430 2c997ab478684573c0d1cc072725b11e 296 Pfam PF00140 Sigma-70 factor, region 1.2 15 41 1.4E-9 T 11-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DB34_01430 2c997ab478684573c0d1cc072725b11e 296 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 47 280 8.4E-33 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DB34_01430 2c997ab478684573c0d1cc072725b11e 296 SUPERFAMILY SSF88659 188 283 8.22E-21 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DB34_01430 2c997ab478684573c0d1cc072725b11e 296 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 251 277 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB34_01430 2c997ab478684573c0d1cc072725b11e 296 SUPERFAMILY SSF88946 11 119 2.35E-40 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DB34_01430 2c997ab478684573c0d1cc072725b11e 296 Pfam PF04542 Sigma-70 region 2 51 116 4.6E-17 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DB34_01430 2c997ab478684573c0d1cc072725b11e 296 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 1 283 49.883 T 11-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 DB34_01430 2c997ab478684573c0d1cc072725b11e 296 Gene3D G3DSA:1.20.140.160 138 285 2.8E-15 T 11-10-2018 DB34_04060 d077722de75b862407758af42992535b 186 SUPERFAMILY SSF117916 106 185 1.09E-27 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily DB34_04060 d077722de75b862407758af42992535b 186 PIRSF PIRSF036773 1 186 8.8E-73 T 11-10-2018 IPR035433 NFU1-like DB34_04060 d077722de75b862407758af42992535b 186 Gene3D G3DSA:3.30.300.130 111 185 5.6E-31 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily DB34_04060 d077722de75b862407758af42992535b 186 Gene3D G3DSA:3.30.1370.70 1 98 3.0E-32 T 11-10-2018 IPR036498 Scaffold protein Nfu/NifU, N-terminal domain superfamily DB34_04060 d077722de75b862407758af42992535b 186 SUPERFAMILY SSF110836 1 93 2.35E-28 T 11-10-2018 IPR036498 Scaffold protein Nfu/NifU, N-terminal domain superfamily DB34_04060 d077722de75b862407758af42992535b 186 SMART SM00932 3 91 1.4E-45 T 11-10-2018 IPR014824 Scaffold protein Nfu/NifU, N-terminal DB34_04060 d077722de75b862407758af42992535b 186 Pfam PF08712 Scaffold protein Nfu/NifU N terminal 3 90 2.2E-30 T 11-10-2018 IPR014824 Scaffold protein Nfu/NifU, N-terminal DB34_04060 d077722de75b862407758af42992535b 186 Pfam PF01106 NifU-like domain 117 183 1.9E-28 T 11-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 DB34_04060 d077722de75b862407758af42992535b 186 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 121 185 5.0E-29 T 11-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 DB34_00320 e545b8c4f1a0d97dfb47bd5a4ce1bf0c 339 Gene3D G3DSA:3.40.50.300 160 338 4.1E-50 T 11-10-2018 DB34_00320 e545b8c4f1a0d97dfb47bd5a4ce1bf0c 339 Pfam PF01926 50S ribosome-binding GTPase 161 281 1.3E-23 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 DB34_00320 e545b8c4f1a0d97dfb47bd5a4ce1bf0c 339 Hamap MF_01454 GTPase Obg [obg]. 2 328 45.728 T 11-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 DB34_00320 e545b8c4f1a0d97dfb47bd5a4ce1bf0c 339 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 1.2E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 DB34_00320 e545b8c4f1a0d97dfb47bd5a4ce1bf0c 339 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 1.2E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 DB34_00320 e545b8c4f1a0d97dfb47bd5a4ce1bf0c 339 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 1.2E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 DB34_00320 e545b8c4f1a0d97dfb47bd5a4ce1bf0c 339 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 1.2E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 DB34_00320 e545b8c4f1a0d97dfb47bd5a4ce1bf0c 339 Gene3D G3DSA:2.70.210.12 1 158 2.5E-56 T 11-10-2018 IPR036726 GTP1/OBG domain superfamily DB34_00320 e545b8c4f1a0d97dfb47bd5a4ce1bf0c 339 PIRSF PIRSF002401 1 338 2.3E-130 T 11-10-2018 IPR035101 GTP-binding protein, Obg-type DB34_00320 e545b8c4f1a0d97dfb47bd5a4ce1bf0c 339 Pfam PF01018 GTP1/OBG 5 158 2.8E-58 T 11-10-2018 IPR006169 GTP1/OBG domain DB34_00320 e545b8c4f1a0d97dfb47bd5a4ce1bf0c 339 SUPERFAMILY SSF82051 2 158 1.05E-53 T 11-10-2018 IPR036726 GTP1/OBG domain superfamily DB34_00320 e545b8c4f1a0d97dfb47bd5a4ce1bf0c 339 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 11-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 DB34_00320 e545b8c4f1a0d97dfb47bd5a4ce1bf0c 339 SUPERFAMILY SSF52540 150 330 1.16E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_00320 e545b8c4f1a0d97dfb47bd5a4ce1bf0c 339 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 326 4.8E-137 T 11-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 DB34_02935 2bcd3899b4f669b1988af7cdaabf03de 253 SMART SM00382 31 226 7.8E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_02935 2bcd3899b4f669b1988af7cdaabf03de 253 Pfam PF00005 ABC transporter 24 178 3.0E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB34_02935 2bcd3899b4f669b1988af7cdaabf03de 253 PIRSF PIRSF039085 3 253 1.8E-100 T 11-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 DB34_02935 2bcd3899b4f669b1988af7cdaabf03de 253 SUPERFAMILY SSF52540 7 248 3.06E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_02935 2bcd3899b4f669b1988af7cdaabf03de 253 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB34_02935 2bcd3899b4f669b1988af7cdaabf03de 253 Gene3D G3DSA:3.40.50.300 5 252 1.5E-72 T 11-10-2018 DB34_09700 67aa4a5973c542d3f238ffe7461c17ba 406 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 303 392 2.2E-16 T 11-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DB34_09700 67aa4a5973c542d3f238ffe7461c17ba 406 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 59 279 2.2E-68 T 11-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 DB34_09700 67aa4a5973c542d3f238ffe7461c17ba 406 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 91 102 1.7E-16 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DB34_09700 67aa4a5973c542d3f238ffe7461c17ba 406 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 144 161 1.7E-16 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DB34_09700 67aa4a5973c542d3f238ffe7461c17ba 406 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 171 184 1.7E-16 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DB34_09700 67aa4a5973c542d3f238ffe7461c17ba 406 Gene3D G3DSA:3.40.710.10 49 302 7.4E-77 T 11-10-2018 DB34_09700 67aa4a5973c542d3f238ffe7461c17ba 406 SMART SM00936 303 393 1.6E-25 T 11-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DB34_09700 67aa4a5973c542d3f238ffe7461c17ba 406 SUPERFAMILY SSF69189 295 391 1.28E-19 T 11-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DB34_09700 67aa4a5973c542d3f238ffe7461c17ba 406 SUPERFAMILY SSF56601 8 303 6.05E-74 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DB34_09700 67aa4a5973c542d3f238ffe7461c17ba 406 Gene3D G3DSA:2.60.410.10 303 392 3.9E-20 T 11-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DB34_09255 e11919fa364d7ad17f3b55807e177986 159 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 23 36 - T 11-10-2018 IPR019823 Large-conductance mechanosensitive channel, conserved site DB34_09255 e11919fa364d7ad17f3b55807e177986 159 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 15 148 3.0E-40 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 DB34_09255 e11919fa364d7ad17f3b55807e177986 159 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 13 149 22.471 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 DB34_09255 e11919fa364d7ad17f3b55807e177986 159 Gene3D G3DSA:1.10.1200.120 14 151 1.7E-39 T 11-10-2018 IPR036019 Gated mechanosensitive channel DB34_09255 e11919fa364d7ad17f3b55807e177986 159 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 15 147 4.7E-43 T 11-10-2018 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L DB34_09255 e11919fa364d7ad17f3b55807e177986 159 SUPERFAMILY SSF81330 22 144 9.29E-35 T 11-10-2018 IPR036019 Gated mechanosensitive channel DB34_09255 e11919fa364d7ad17f3b55807e177986 159 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 101 109 6.3E-9 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 DB34_09255 e11919fa364d7ad17f3b55807e177986 159 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 16 30 6.3E-9 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 DB34_09255 e11919fa364d7ad17f3b55807e177986 159 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 110 119 6.3E-9 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 DB34_08565 435e2a18f3a69155672be250f5da28ca 447 SUPERFAMILY SSF158472 166 214 4.71E-7 T 11-10-2018 DB34_08565 435e2a18f3a69155672be250f5da28ca 447 SUPERFAMILY SSF47384 199 282 1.22E-12 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DB34_08565 435e2a18f3a69155672be250f5da28ca 447 Gene3D G3DSA:1.10.287.130 167 283 1.8E-19 T 11-10-2018 DB34_08565 435e2a18f3a69155672be250f5da28ca 447 Pfam PF00512 His Kinase A (phospho-acceptor) domain 222 281 3.9E-7 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DB34_08565 435e2a18f3a69155672be250f5da28ca 447 SMART SM00387 328 439 8.8E-31 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB34_08565 435e2a18f3a69155672be250f5da28ca 447 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 436 1.7E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB34_08565 435e2a18f3a69155672be250f5da28ca 447 PRINTS PR00344 Bacterial sensor protein C-terminal signature 365 379 1.7E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB34_08565 435e2a18f3a69155672be250f5da28ca 447 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 416 1.7E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB34_08565 435e2a18f3a69155672be250f5da28ca 447 Gene3D G3DSA:3.30.565.10 289 441 2.6E-31 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB34_08565 435e2a18f3a69155672be250f5da28ca 447 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 328 436 4.0E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB34_08565 435e2a18f3a69155672be250f5da28ca 447 SUPERFAMILY SSF55874 273 438 1.7E-36 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB34_08565 435e2a18f3a69155672be250f5da28ca 447 SMART SM00304 162 215 2.1E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DB34_08565 435e2a18f3a69155672be250f5da28ca 447 SMART SM00388 216 282 7.6E-8 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DB34_05335 052a1f57be2c2484e199791e4330fbe5 245 Gene3D G3DSA:3.40.50.150 36 245 2.5E-43 T 11-10-2018 DB34_05335 052a1f57be2c2484e199791e4330fbe5 245 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 27 245 25.165 T 11-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 DB34_05335 052a1f57be2c2484e199791e4330fbe5 245 Pfam PF02390 Putative methyltransferase 69 235 2.6E-29 T 11-10-2018 DB34_05335 052a1f57be2c2484e199791e4330fbe5 245 SUPERFAMILY SSF53335 53 243 1.1E-18 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB34_07980 747cddff44976254612ac9bb568ccfb6 236 SUPERFAMILY SSF69593 4 210 2.48E-36 T 11-10-2018 DB34_07980 747cddff44976254612ac9bb568ccfb6 236 Pfam PF01553 Acyltransferase 57 182 3.9E-25 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 DB34_07980 747cddff44976254612ac9bb568ccfb6 236 SMART SM00563 72 186 2.3E-29 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 DB34_12905 65a176eed11c001d536a896039c00c76 384 Pfam PF02542 YgbB family 229 381 1.4E-59 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 DB34_12905 65a176eed11c001d536a896039c00c76 384 SUPERFAMILY SSF69765 227 382 1.14E-62 T 11-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 DB34_12905 65a176eed11c001d536a896039c00c76 384 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 228 383 33.624 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 DB34_12905 65a176eed11c001d536a896039c00c76 384 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 262 277 - T 11-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 DB34_12905 65a176eed11c001d536a896039c00c76 384 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 2 222 36.758 T 11-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 DB34_12905 65a176eed11c001d536a896039c00c76 384 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 102 109 - T 11-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 DB34_12905 65a176eed11c001d536a896039c00c76 384 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 3 219 1.6E-53 T 11-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 DB34_12905 65a176eed11c001d536a896039c00c76 384 Gene3D G3DSA:3.30.1330.50 226 383 3.1E-64 T 11-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 DB34_12905 65a176eed11c001d536a896039c00c76 384 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 5 221 7.2E-58 T 11-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 DB34_12905 65a176eed11c001d536a896039c00c76 384 Gene3D G3DSA:3.90.550.10 1 223 1.4E-63 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB34_12905 65a176eed11c001d536a896039c00c76 384 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 229 381 2.4E-64 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 DB34_12905 65a176eed11c001d536a896039c00c76 384 Hamap MF_01520 Bifunctional enzyme IspD/IspF [ispDF]. 1 384 42.354 T 11-10-2018 IPR026596 Bifunctional enzyme IspD/IspF KEGG: 00900+4.6.1.12+2.7.7.60|MetaCyc: PWY-7560 DB34_12905 65a176eed11c001d536a896039c00c76 384 SUPERFAMILY SSF53448 3 222 5.86E-50 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB34_04325 39968d2513eca72bae55e7abb5256f20 199 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 11 196 5.1E-55 T 11-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 DB34_04325 39968d2513eca72bae55e7abb5256f20 199 SUPERFAMILY SSF52972 10 197 2.62E-67 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like DB34_04325 39968d2513eca72bae55e7abb5256f20 199 Gene3D G3DSA:3.90.950.10 7 198 1.0E-70 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like DB34_04325 39968d2513eca72bae55e7abb5256f20 199 Pfam PF01725 Ham1 family 12 195 8.7E-58 T 11-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 DB34_04325 39968d2513eca72bae55e7abb5256f20 199 Hamap MF_01405 dITP/XTP pyrophosphatase. 10 199 46.316 T 11-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 DB34_09535 f5b3bdea7be053a08860763adadac7d9 335 Pfam PF12556 Cobaltochelatase CobS subunit N terminal 20 50 1.6E-17 T 11-10-2018 IPR025865 Cobaltochelatase subunit CobS N-terminal domain KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376 DB34_09535 f5b3bdea7be053a08860763adadac7d9 335 Gene3D G3DSA:3.40.50.300 61 240 3.1E-23 T 11-10-2018 DB34_09535 f5b3bdea7be053a08860763adadac7d9 335 TIGRFAM TIGR01650 PD_CobS: cobaltochelatase, CobS subunit 20 328 1.4E-169 T 11-10-2018 IPR006537 Cobaltochelatase subunit CobS KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376 DB34_09535 f5b3bdea7be053a08860763adadac7d9 335 Pfam PF07728 AAA domain (dynein-related subfamily) 77 201 2.5E-10 T 11-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 DB34_09535 f5b3bdea7be053a08860763adadac7d9 335 SUPERFAMILY SSF52540 52 295 1.31E-27 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_10460 8b06bdcc2954f11e2df6edc85a29e57d 300 Pfam PF03466 LysR substrate binding domain 91 290 5.9E-30 T 11-10-2018 IPR005119 LysR, substrate-binding DB34_10460 8b06bdcc2954f11e2df6edc85a29e57d 300 SUPERFAMILY SSF46785 6 87 5.31E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB34_10460 8b06bdcc2954f11e2df6edc85a29e57d 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 6.0E-15 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB34_10460 8b06bdcc2954f11e2df6edc85a29e57d 300 Gene3D G3DSA:1.10.10.10 4 90 4.5E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB34_10460 8b06bdcc2954f11e2df6edc85a29e57d 300 Gene3D G3DSA:3.40.190.290 92 295 1.2E-25 T 11-10-2018 DB34_10460 8b06bdcc2954f11e2df6edc85a29e57d 300 SUPERFAMILY SSF53850 96 296 2.02E-27 T 11-10-2018 DB34_11730 6bad14ddfd1384774f6672379b5df345 605 Gene3D G3DSA:3.40.50.720 401 507 1.2E-5 T 11-10-2018 DB34_11730 6bad14ddfd1384774f6672379b5df345 605 SUPERFAMILY SSF51735 406 497 2.3E-5 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily DB34_11730 6bad14ddfd1384774f6672379b5df345 605 Pfam PF02254 TrkA-N domain 406 495 5.3E-5 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 DB34_11730 6bad14ddfd1384774f6672379b5df345 605 Gene3D G3DSA:1.20.1530.20 2 394 3.7E-18 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily DB34_11730 6bad14ddfd1384774f6672379b5df345 605 Pfam PF00999 Sodium/hydrogen exchanger family 10 391 1.1E-35 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 DB34_12965 164822bf7ea5c7f81b0c56958a633fb9 161 Gene3D G3DSA:3.40.50.2020 4 154 1.9E-35 T 11-10-2018 DB34_12965 164822bf7ea5c7f81b0c56958a633fb9 161 SUPERFAMILY SSF53271 7 148 2.27E-27 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like DB34_12965 164822bf7ea5c7f81b0c56958a633fb9 161 Pfam PF00156 Phosphoribosyl transferase domain 32 145 6.8E-12 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 DB34_10725 4ccfe52f5de124b3c06555a61becb502 301 Gene3D G3DSA:3.40.50.1820 3 301 4.9E-80 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold DB34_10725 4ccfe52f5de124b3c06555a61becb502 301 Pfam PF07859 alpha/beta hydrolase fold 68 278 4.5E-60 T 11-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 DB34_10725 4ccfe52f5de124b3c06555a61becb502 301 SUPERFAMILY SSF53474 33 299 1.8E-61 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold DB34_11720 135ffa0d051308c8696de35609e03f96 240 Gene3D G3DSA:3.40.50.2300 2 128 4.0E-34 T 11-10-2018 DB34_11720 135ffa0d051308c8696de35609e03f96 240 Gene3D G3DSA:1.10.10.10 129 234 3.2E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB34_11720 135ffa0d051308c8696de35609e03f96 240 SMART SM00862 154 229 1.2E-18 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DB34_11720 135ffa0d051308c8696de35609e03f96 240 SMART SM00448 5 119 1.3E-36 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB34_11720 135ffa0d051308c8696de35609e03f96 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 229 1.4E-20 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DB34_11720 135ffa0d051308c8696de35609e03f96 240 Pfam PF00072 Response regulator receiver domain 7 119 2.5E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB34_11720 135ffa0d051308c8696de35609e03f96 240 SUPERFAMILY SSF52172 6 161 2.7E-37 T 11-10-2018 IPR011006 CheY-like superfamily DB34_11720 135ffa0d051308c8696de35609e03f96 240 SUPERFAMILY SSF46894 130 231 1.79E-19 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DB34_02305 6976747593f29119fee01b10d19bb75c 161 TIGRFAM TIGR00754 bfr: bacterioferritin 1 151 1.5E-63 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DB34_02305 6976747593f29119fee01b10d19bb75c 161 Gene3D G3DSA:1.20.1260.10 1 156 5.2E-64 T 11-10-2018 IPR012347 Ferritin-like DB34_02305 6976747593f29119fee01b10d19bb75c 161 PRINTS PR00601 Bacterioferritin signature 65 85 2.6E-60 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DB34_02305 6976747593f29119fee01b10d19bb75c 161 PRINTS PR00601 Bacterioferritin signature 23 43 2.6E-60 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DB34_02305 6976747593f29119fee01b10d19bb75c 161 PRINTS PR00601 Bacterioferritin signature 107 127 2.6E-60 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DB34_02305 6976747593f29119fee01b10d19bb75c 161 PRINTS PR00601 Bacterioferritin signature 44 64 2.6E-60 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DB34_02305 6976747593f29119fee01b10d19bb75c 161 PRINTS PR00601 Bacterioferritin signature 86 106 2.6E-60 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DB34_02305 6976747593f29119fee01b10d19bb75c 161 PRINTS PR00601 Bacterioferritin signature 3 22 2.6E-60 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DB34_02305 6976747593f29119fee01b10d19bb75c 161 PRINTS PR00601 Bacterioferritin signature 128 149 2.6E-60 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DB34_02305 6976747593f29119fee01b10d19bb75c 161 SUPERFAMILY SSF47240 1 152 1.2E-49 T 11-10-2018 IPR009078 Ferritin-like superfamily DB34_02305 6976747593f29119fee01b10d19bb75c 161 Pfam PF00210 Ferritin-like domain 8 144 3.1E-38 T 11-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 DB34_02305 6976747593f29119fee01b10d19bb75c 161 PIRSF PIRSF002560 1 157 3.0E-65 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DB34_05010 b37d0f616bd83cca0cfc2d6ecfa9f50f 304 Gene3D G3DSA:3.40.50.720 18 275 2.1E-100 T 11-10-2018 DB34_05010 b37d0f616bd83cca0cfc2d6ecfa9f50f 304 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 17 133 1.6E-37 T 11-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DB34_05010 b37d0f616bd83cca0cfc2d6ecfa9f50f 304 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 167 187 6.8E-81 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DB34_05010 b37d0f616bd83cca0cfc2d6ecfa9f50f 304 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 216 245 6.8E-81 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DB34_05010 b37d0f616bd83cca0cfc2d6ecfa9f50f 304 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 87 114 6.8E-81 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DB34_05010 b37d0f616bd83cca0cfc2d6ecfa9f50f 304 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 272 290 6.8E-81 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DB34_05010 b37d0f616bd83cca0cfc2d6ecfa9f50f 304 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 122 143 6.8E-81 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DB34_05010 b37d0f616bd83cca0cfc2d6ecfa9f50f 304 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 46 68 6.8E-81 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DB34_05010 b37d0f616bd83cca0cfc2d6ecfa9f50f 304 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 255 271 6.8E-81 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DB34_05010 b37d0f616bd83cca0cfc2d6ecfa9f50f 304 Hamap MF_01576 Bifunctional protein FolD [folD]. 15 299 36.441 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DB34_05010 b37d0f616bd83cca0cfc2d6ecfa9f50f 304 SUPERFAMILY SSF53223 15 134 1.06E-39 T 11-10-2018 DB34_05010 b37d0f616bd83cca0cfc2d6ecfa9f50f 304 SUPERFAMILY SSF51735 137 297 1.09E-48 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily DB34_05010 b37d0f616bd83cca0cfc2d6ecfa9f50f 304 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 137 298 6.9E-63 T 11-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DB34_05010 b37d0f616bd83cca0cfc2d6ecfa9f50f 304 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 88 113 - T 11-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DB34_05010 b37d0f616bd83cca0cfc2d6ecfa9f50f 304 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 276 284 - T 11-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DB34_05010 b37d0f616bd83cca0cfc2d6ecfa9f50f 304 Gene3D G3DSA:3.40.50.10860 20 292 2.1E-100 T 11-10-2018 DB34_13260 f7235da1e3db65db9120427d8fee42e9 291 SUPERFAMILY SSF56349 31 282 7.36E-45 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DB34_13260 f7235da1e3db65db9120427d8fee42e9 291 Pfam PF00589 Phage integrase family 122 281 4.3E-27 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 DB34_13260 f7235da1e3db65db9120427d8fee42e9 291 Gene3D G3DSA:1.10.443.10 115 289 3.9E-40 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 DB34_13260 f7235da1e3db65db9120427d8fee42e9 291 Gene3D G3DSA:1.10.150.130 27 106 1.3E-8 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal DB34_13260 f7235da1e3db65db9120427d8fee42e9 291 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 34 93 4.1E-8 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 DB34_09225 676a10e9039cef004c31c7f0014a6dd5 155 SUPERFAMILY SSF52255 1 150 1.7E-61 T 11-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 DB34_09225 676a10e9039cef004c31c7f0014a6dd5 155 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 1 147 2.3E-61 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 DB34_09225 676a10e9039cef004c31c7f0014a6dd5 155 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 1 150 28.657 T 11-10-2018 IPR033747 Class I PurE DB34_09225 676a10e9039cef004c31c7f0014a6dd5 155 Gene3D G3DSA:3.40.50.7700 1 155 4.5E-69 T 11-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 DB34_09225 676a10e9039cef004c31c7f0014a6dd5 155 PIRSF PIRSF001338 1 153 5.4E-62 T 11-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 DB34_09225 676a10e9039cef004c31c7f0014a6dd5 155 SMART SM01001 1 146 3.1E-91 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 DB34_09225 676a10e9039cef004c31c7f0014a6dd5 155 Pfam PF00731 AIR carboxylase 1 142 3.8E-60 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 DB34_05520 aed1646a434b5ee50bf04b39de7a8eb2 306 SUPERFAMILY SSF55347 120 284 2.88E-39 T 11-10-2018 DB34_05520 aed1646a434b5ee50bf04b39de7a8eb2 306 Gene3D G3DSA:3.30.360.10 119 288 5.1E-50 T 11-10-2018 DB34_05520 aed1646a434b5ee50bf04b39de7a8eb2 306 TIGRFAM TIGR01851 argC_other: N-acetyl-gamma-glutamyl-phosphate reductase 4 302 1.8E-113 T 11-10-2018 IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 GO:0003942|GO:0005737|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DB34_05520 aed1646a434b5ee50bf04b39de7a8eb2 306 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 115 131 - T 11-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DB34_05520 aed1646a434b5ee50bf04b39de7a8eb2 306 SMART SM00859 6 109 1.2E-13 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 DB34_05520 aed1646a434b5ee50bf04b39de7a8eb2 306 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 44 105 2.1E-7 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 DB34_05520 aed1646a434b5ee50bf04b39de7a8eb2 306 Gene3D G3DSA:3.40.50.720 36 304 5.1E-50 T 11-10-2018 DB34_05520 aed1646a434b5ee50bf04b39de7a8eb2 306 SUPERFAMILY SSF51735 7 138 4.43E-26 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily DB34_05520 aed1646a434b5ee50bf04b39de7a8eb2 306 Hamap MF_01110 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 3 303 49.205 T 11-10-2018 IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 GO:0003942|GO:0005737|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DB34_09470 4f58c97e43e29b30bd615e1d486fe3c3 426 Pfam PF03952 Enolase, N-terminal domain 4 134 3.1E-58 T 11-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DB34_09470 4f58c97e43e29b30bd615e1d486fe3c3 426 ProSitePatterns PS00164 Enolase signature. 334 347 - T 11-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB34_09470 4f58c97e43e29b30bd615e1d486fe3c3 426 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 423 9.2E-207 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DB34_09470 4f58c97e43e29b30bd615e1d486fe3c3 426 SUPERFAMILY SSF51604 139 422 1.9E-124 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily DB34_09470 4f58c97e43e29b30bd615e1d486fe3c3 426 SMART SM01192 139 425 3.5E-220 T 11-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DB34_09470 4f58c97e43e29b30bd615e1d486fe3c3 426 PRINTS PR00148 Enolase signature 161 174 5.0E-48 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DB34_09470 4f58c97e43e29b30bd615e1d486fe3c3 426 PRINTS PR00148 Enolase signature 107 123 5.0E-48 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DB34_09470 4f58c97e43e29b30bd615e1d486fe3c3 426 PRINTS PR00148 Enolase signature 37 51 5.0E-48 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DB34_09470 4f58c97e43e29b30bd615e1d486fe3c3 426 PRINTS PR00148 Enolase signature 334 348 5.0E-48 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DB34_09470 4f58c97e43e29b30bd615e1d486fe3c3 426 PRINTS PR00148 Enolase signature 363 380 5.0E-48 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DB34_09470 4f58c97e43e29b30bd615e1d486fe3c3 426 PRINTS PR00148 Enolase signature 311 322 5.0E-48 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DB34_09470 4f58c97e43e29b30bd615e1d486fe3c3 426 Pfam PF00113 Enolase, C-terminal TIM barrel domain 140 424 1.5E-130 T 11-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DB34_09470 4f58c97e43e29b30bd615e1d486fe3c3 426 Hamap MF_00318 Enolase [eno]. 2 411 44.43 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DB34_09470 4f58c97e43e29b30bd615e1d486fe3c3 426 SUPERFAMILY SSF54826 4 141 1.68E-55 T 11-10-2018 DB34_09470 4f58c97e43e29b30bd615e1d486fe3c3 426 Gene3D G3DSA:3.20.20.120 129 426 1.4E-129 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily DB34_09470 4f58c97e43e29b30bd615e1d486fe3c3 426 Gene3D G3DSA:3.30.390.10 1 127 7.6E-55 T 11-10-2018 IPR029017 Enolase-like, N-terminal DB34_09470 4f58c97e43e29b30bd615e1d486fe3c3 426 SMART SM01193 4 134 2.7E-91 T 11-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DB34_09470 4f58c97e43e29b30bd615e1d486fe3c3 426 PIRSF PIRSF001400 1 425 3.3E-188 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DB34_09775 698c0c6dbd8ffa77c2940adeecdccb28 336 SMART SM00876 236 328 2.2E-44 T 11-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 DB34_09775 698c0c6dbd8ffa77c2940adeecdccb28 336 PIRSF PIRSF001619 8 333 7.1E-133 T 11-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 DB34_09775 698c0c6dbd8ffa77c2940adeecdccb28 336 SUPERFAMILY SSF102114 21 326 1.57E-86 T 11-10-2018 DB34_09775 698c0c6dbd8ffa77c2940adeecdccb28 336 Gene3D G3DSA:3.20.20.70 20 330 4.9E-125 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB34_09775 698c0c6dbd8ffa77c2940adeecdccb28 336 Hamap MF_01694 Biotin synthase [bioB]. 21 329 41.301 T 11-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 DB34_09775 698c0c6dbd8ffa77c2940adeecdccb28 336 Pfam PF04055 Radical SAM superfamily 66 219 3.3E-15 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DB34_09775 698c0c6dbd8ffa77c2940adeecdccb28 336 TIGRFAM TIGR00433 bioB: biotin synthase 31 326 3.8E-122 T 11-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 DB34_09775 698c0c6dbd8ffa77c2940adeecdccb28 336 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 236 326 7.8E-20 T 11-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 DB34_09775 698c0c6dbd8ffa77c2940adeecdccb28 336 SMART SM00729 59 271 1.8E-38 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DB34_03910 a53353fe1f9d6abfa9b53d53b5805350 210 Hamap MF_00528 Septum formation protein Maf [maf]. 17 209 23.502 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 DB34_03910 a53353fe1f9d6abfa9b53d53b5805350 210 PIRSF PIRSF006305 11 209 1.6E-36 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 DB34_03910 a53353fe1f9d6abfa9b53d53b5805350 210 Gene3D G3DSA:3.90.950.10 15 208 1.8E-44 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like DB34_03910 a53353fe1f9d6abfa9b53d53b5805350 210 SUPERFAMILY SSF52972 17 204 9.16E-45 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like DB34_03910 a53353fe1f9d6abfa9b53d53b5805350 210 Pfam PF02545 Maf-like protein 17 204 1.3E-37 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 DB34_09145 6e7304ebf89bed397127377b825955dc 819 SUPERFAMILY SSF56037 203 397 5.75E-66 T 11-10-2018 DB34_09145 6e7304ebf89bed397127377b825955dc 819 SUPERFAMILY SSF54991 724 819 4.45E-26 T 11-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 DB34_09145 6e7304ebf89bed397127377b825955dc 819 Pfam PF03483 B3/4 domain 214 386 5.0E-60 T 11-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 DB34_09145 6e7304ebf89bed397127377b825955dc 819 SMART SM00874 402 498 1.1E-18 T 11-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 DB34_09145 6e7304ebf89bed397127377b825955dc 819 Gene3D G3DSA:3.30.930.10 518 712 2.0E-37 T 11-10-2018 DB34_09145 6e7304ebf89bed397127377b825955dc 819 SUPERFAMILY SSF55681 494 711 1.09E-34 T 11-10-2018 DB34_09145 6e7304ebf89bed397127377b825955dc 819 Gene3D G3DSA:3.30.70.380 727 819 1.5E-23 T 11-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 DB34_09145 6e7304ebf89bed397127377b825955dc 819 SMART SM00873 214 386 3.0E-81 T 11-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 DB34_09145 6e7304ebf89bed397127377b825955dc 819 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 457 4.2E-136 T 11-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 DB34_09145 6e7304ebf89bed397127377b825955dc 819 Gene3D G3DSA:3.30.56.10 402 462 1.0E-10 T 11-10-2018 DB34_09145 6e7304ebf89bed397127377b825955dc 819 Pfam PF01588 Putative tRNA binding domain 47 147 8.7E-20 T 11-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 DB34_09145 6e7304ebf89bed397127377b825955dc 819 SUPERFAMILY SSF50249 36 192 2.09E-41 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB34_09145 6e7304ebf89bed397127377b825955dc 819 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 813 38.007 T 11-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 DB34_09145 6e7304ebf89bed397127377b825955dc 819 Gene3D G3DSA:2.40.50.140 39 156 1.2E-63 T 11-10-2018 DB34_09145 6e7304ebf89bed397127377b825955dc 819 SMART SM00896 726 819 1.5E-39 T 11-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 DB34_09145 6e7304ebf89bed397127377b825955dc 819 Gene3D G3DSA:3.50.40.10 201 395 3.4E-67 T 11-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 DB34_09145 6e7304ebf89bed397127377b825955dc 819 SUPERFAMILY SSF46955 405 457 4.39E-7 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily DB34_09145 6e7304ebf89bed397127377b825955dc 819 Gene3D G3DSA:3.30.56.10 5 183 1.2E-63 T 11-10-2018 DB34_09145 6e7304ebf89bed397127377b825955dc 819 Pfam PF03147 Ferredoxin-fold anticodon binding domain 726 819 2.8E-24 T 11-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 DB34_09145 6e7304ebf89bed397127377b825955dc 819 Pfam PF03484 tRNA synthetase B5 domain 406 498 2.9E-13 T 11-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 DB34_07745 e058051a6ab22da95ea8ce187edf1df3 148 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 134 1.3E-33 T 11-10-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 DB34_07745 e058051a6ab22da95ea8ce187edf1df3 148 SUPERFAMILY SSF102400 1 139 1.07E-35 T 11-10-2018 IPR036768 DNA polymerase III subunit chi superfamily DB34_07745 e058051a6ab22da95ea8ce187edf1df3 148 Gene3D G3DSA:3.40.50.10110 1 138 1.0E-20 T 11-10-2018 IPR036768 DNA polymerase III subunit chi superfamily DB34_08755 89397adf01ca09ac71f0871b75ae286a 339 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 259 330 1.0E-33 T 11-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB34_08755 89397adf01ca09ac71f0871b75ae286a 339 SUPERFAMILY SSF47789 253 328 7.32E-27 T 11-10-2018 DB34_08755 89397adf01ca09ac71f0871b75ae286a 339 Gene3D G3DSA:1.10.150.20 247 331 3.4E-36 T 11-10-2018 DB34_08755 89397adf01ca09ac71f0871b75ae286a 339 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 63 158 1.4E-21 T 11-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB34_08755 89397adf01ca09ac71f0871b75ae286a 339 Gene3D G3DSA:3.30.1360.10 27 228 3.2E-84 T 11-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB34_08755 89397adf01ca09ac71f0871b75ae286a 339 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 253 310 4.8E-25 T 11-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB34_08755 89397adf01ca09ac71f0871b75ae286a 339 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 28 319 4.3E-117 T 11-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB34_08755 89397adf01ca09ac71f0871b75ae286a 339 Gene3D G3DSA:2.170.120.12 57 177 3.2E-84 T 11-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB34_08755 89397adf01ca09ac71f0871b75ae286a 339 SMART SM00662 27 234 1.8E-95 T 11-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB34_08755 89397adf01ca09ac71f0871b75ae286a 339 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 7 319 36.285 T 11-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB34_08755 89397adf01ca09ac71f0871b75ae286a 339 SUPERFAMILY SSF55257 33 237 5.1E-30 T 11-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB34_08755 89397adf01ca09ac71f0871b75ae286a 339 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 33 228 3.5E-24 T 11-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB34_08755 89397adf01ca09ac71f0871b75ae286a 339 SUPERFAMILY SSF56553 57 178 1.06E-42 T 11-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB34_11940 75c775b40860c70196e18632fc782c88 229 Hamap MF_00657 PKHD-type hydroxylase YbiX [ybiX]. 1 229 43.092 T 11-10-2018 IPR023550 PKHD-type hydroxylase GO:0016706|GO:0055114 DB34_11940 75c775b40860c70196e18632fc782c88 229 Gene3D G3DSA:2.60.120.620 1 180 7.8E-41 T 11-10-2018 DB34_11940 75c775b40860c70196e18632fc782c88 229 SMART SM00702 1 179 2.0E-14 T 11-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 DB34_11940 75c775b40860c70196e18632fc782c88 229 Gene3D G3DSA:4.10.860.20 182 228 2.9E-14 T 11-10-2018 DB34_11940 75c775b40860c70196e18632fc782c88 229 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 84 178 4.4E-14 T 11-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 DB34_08240 89841bde1057e9fd436475746b0f06fa 179 SUPERFAMILY SSF51182 77 132 1.25E-6 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily DB34_04170 2b100c0e2dd308845c82d07c0ccab55f 603 Gene3D G3DSA:3.50.50.60 20 426 5.0E-166 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_04170 2b100c0e2dd308845c82d07c0ccab55f 603 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 17 603 1.5E-292 T 11-10-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 DB34_04170 2b100c0e2dd308845c82d07c0ccab55f 603 SUPERFAMILY SSF51905 13 442 2.4E-82 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_04170 2b100c0e2dd308845c82d07c0ccab55f 603 SUPERFAMILY SSF46977 461 603 9.81E-49 T 11-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DB34_04170 2b100c0e2dd308845c82d07c0ccab55f 603 Pfam PF00890 FAD binding domain 20 415 2.7E-123 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 DB34_04170 2b100c0e2dd308845c82d07c0ccab55f 603 Pfam PF02910 Fumarate reductase flavoprotein C-term 470 603 2.6E-42 T 11-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DB34_04170 2b100c0e2dd308845c82d07c0ccab55f 603 PIRSF PIRSF000171 10 593 1.9E-39 T 11-10-2018 DB34_04170 2b100c0e2dd308845c82d07c0ccab55f 603 Gene3D G3DSA:1.20.58.100 445 554 3.9E-37 T 11-10-2018 DB34_04170 2b100c0e2dd308845c82d07c0ccab55f 603 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 54 63 - T 11-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DB34_04170 2b100c0e2dd308845c82d07c0ccab55f 603 Gene3D G3DSA:4.10.80.40 555 603 7.9E-11 T 11-10-2018 DB34_04170 2b100c0e2dd308845c82d07c0ccab55f 603 Gene3D G3DSA:3.90.700.10 257 360 5.0E-166 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 DB34_04170 2b100c0e2dd308845c82d07c0ccab55f 603 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 20 603 1.1E-241 T 11-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DB34_04170 2b100c0e2dd308845c82d07c0ccab55f 603 SUPERFAMILY SSF56425 247 365 6.58E-41 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 DB34_11125 2d317da2941d042ca5116a117ff217a7 306 SUPERFAMILY SSF144020 22 305 9.81E-58 T 11-10-2018 IPR024064 FdhE-like superfamily DB34_11125 2d317da2941d042ca5116a117ff217a7 306 TIGRFAM TIGR01562 FdhE: formate dehydrogenase accessory protein FdhE 10 305 5.1E-60 T 11-10-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 DB34_11125 2d317da2941d042ca5116a117ff217a7 306 PIRSF PIRSF018296 4 306 3.2E-74 T 11-10-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 DB34_11125 2d317da2941d042ca5116a117ff217a7 306 Pfam PF04216 Protein involved in formate dehydrogenase formation 19 304 5.2E-83 T 11-10-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 DB34_11125 2d317da2941d042ca5116a117ff217a7 306 Gene3D G3DSA:3.90.1670.10 23 306 1.7E-66 T 11-10-2018 IPR024064 FdhE-like superfamily DB34_08580 a9cd77e0e0c70a9cdd9f4a186be2220f 536 Pfam PF02321 Outer membrane efflux protein 73 266 2.7E-15 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DB34_08580 a9cd77e0e0c70a9cdd9f4a186be2220f 536 Pfam PF02321 Outer membrane efflux protein 291 473 2.3E-21 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DB34_08580 a9cd77e0e0c70a9cdd9f4a186be2220f 536 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 20 475 5.2E-96 T 11-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 DB34_08580 a9cd77e0e0c70a9cdd9f4a186be2220f 536 Gene3D G3DSA:1.20.1600.10 63 476 4.0E-110 T 11-10-2018 DB34_08580 a9cd77e0e0c70a9cdd9f4a186be2220f 536 SUPERFAMILY SSF56954 9 477 4.05E-91 T 11-10-2018 DB34_08580 a9cd77e0e0c70a9cdd9f4a186be2220f 536 Gene3D G3DSA:2.20.200.10 110 364 4.0E-110 T 11-10-2018 DB34_02100 df7a66abc74561a2dd0d588eed6f64bd 295 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 21 248 9.2E-27 T 11-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 DB34_02100 df7a66abc74561a2dd0d588eed6f64bd 295 ProSitePatterns PS01228 Hypothetical cof family signature 1. 21 32 - T 11-10-2018 DB34_02100 df7a66abc74561a2dd0d588eed6f64bd 295 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 21 274 4.5E-50 T 11-10-2018 IPR000150 Cof family GO:0016787 DB34_02100 df7a66abc74561a2dd0d588eed6f64bd 295 Gene3D G3DSA:3.30.1240.10 99 204 7.0E-60 T 11-10-2018 DB34_02100 df7a66abc74561a2dd0d588eed6f64bd 295 Pfam PF08282 haloacid dehalogenase-like hydrolase 22 275 8.4E-55 T 11-10-2018 DB34_02100 df7a66abc74561a2dd0d588eed6f64bd 295 Gene3D G3DSA:3.40.50.1000 20 276 7.0E-60 T 11-10-2018 IPR023214 HAD superfamily DB34_02100 df7a66abc74561a2dd0d588eed6f64bd 295 SUPERFAMILY SSF56784 17 280 1.2E-61 T 11-10-2018 IPR036412 HAD-like superfamily DB34_07825 cbcfc2a4a907a8c749c5621b3d95accf 314 SUPERFAMILY SSF52374 18 177 5.33E-27 T 11-10-2018 DB34_07825 cbcfc2a4a907a8c749c5621b3d95accf 314 Gene3D G3DSA:2.40.30.30 188 313 9.2E-43 T 11-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 DB34_07825 cbcfc2a4a907a8c749c5621b3d95accf 314 Gene3D G3DSA:3.40.50.620 4 186 2.3E-51 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DB34_07825 cbcfc2a4a907a8c749c5621b3d95accf 314 PIRSF PIRSF004491 3 312 6.7E-91 T 11-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 DB34_07825 cbcfc2a4a907a8c749c5621b3d95accf 314 Pfam PF06574 FAD synthetase 14 167 2.4E-42 T 11-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 DB34_07825 cbcfc2a4a907a8c749c5621b3d95accf 314 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 22 308 1.6E-78 T 11-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 DB34_07825 cbcfc2a4a907a8c749c5621b3d95accf 314 SUPERFAMILY SSF82114 174 308 5.23E-43 T 11-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 DB34_07825 cbcfc2a4a907a8c749c5621b3d95accf 314 SMART SM00904 183 308 1.9E-60 T 11-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 DB34_07825 cbcfc2a4a907a8c749c5621b3d95accf 314 Pfam PF01687 Riboflavin kinase 184 307 1.6E-38 T 11-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 DB34_04080 e7d79445d8d024cf69f37ea583ead693 422 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 287 294 - T 11-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DB34_04080 e7d79445d8d024cf69f37ea583ead693 422 Gene3D G3DSA:3.40.50.20 2 93 3.8E-31 T 11-10-2018 DB34_04080 e7d79445d8d024cf69f37ea583ead693 422 Gene3D G3DSA:3.90.600.10 327 422 2.5E-32 T 11-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DB34_04080 e7d79445d8d024cf69f37ea583ead693 422 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 328 420 1.1E-28 T 11-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DB34_04080 e7d79445d8d024cf69f37ea583ead693 422 SUPERFAMILY SSF51246 325 422 1.73E-29 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 DB34_04080 e7d79445d8d024cf69f37ea583ead693 422 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 422 39.098 T 11-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DB34_04080 e7d79445d8d024cf69f37ea583ead693 422 SUPERFAMILY SSF56059 102 317 2.12E-51 T 11-10-2018 DB34_04080 e7d79445d8d024cf69f37ea583ead693 422 SUPERFAMILY SSF52440 1 101 2.16E-31 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily DB34_04080 e7d79445d8d024cf69f37ea583ead693 422 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 422 1.4E-146 T 11-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DB34_04080 e7d79445d8d024cf69f37ea583ead693 422 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 100 1.1E-31 T 11-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DB34_04080 e7d79445d8d024cf69f37ea583ead693 422 SMART SM01210 327 422 1.7E-50 T 11-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DB34_04080 e7d79445d8d024cf69f37ea583ead693 422 Gene3D G3DSA:3.30.1490.20 121 188 4.8E-25 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 DB34_04080 e7d79445d8d024cf69f37ea583ead693 422 SMART SM01209 101 293 6.7E-116 T 11-10-2018 DB34_04080 e7d79445d8d024cf69f37ea583ead693 422 Gene3D G3DSA:3.30.470.20 189 326 1.6E-47 T 11-10-2018 DB34_04080 e7d79445d8d024cf69f37ea583ead693 422 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 101 293 2.7E-69 T 11-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DB34_03880 831ae4939c6ea666150cc5b4b6f2f6fc 194 Gene3D G3DSA:3.40.50.450 2 191 2.2E-69 T 11-10-2018 DB34_03880 831ae4939c6ea666150cc5b4b6f2f6fc 194 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 7 176 1.6E-59 T 11-10-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG DB34_03880 831ae4939c6ea666150cc5b4b6f2f6fc 194 Pfam PF03641 Possible lysine decarboxylase 50 178 1.4E-39 T 11-10-2018 IPR031100 LOG family DB34_03880 831ae4939c6ea666150cc5b4b6f2f6fc 194 SUPERFAMILY SSF102405 5 178 6.11E-57 T 11-10-2018 DB34_07900 03bb6a1a397595ca43befcebfa2a6f6b 676 Pfam PF00773 RNB domain 260 498 8.9E-62 T 11-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 DB34_07900 03bb6a1a397595ca43befcebfa2a6f6b 676 Pfam PF00773 RNB domain 502 542 7.0E-14 T 11-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 DB34_07900 03bb6a1a397595ca43befcebfa2a6f6b 676 ProSitePatterns PS01175 Ribonuclease II family signature. 512 536 - T 11-10-2018 IPR022966 Ribonuclease II/R, conserved site DB34_07900 03bb6a1a397595ca43befcebfa2a6f6b 676 SMART SM00955 260 545 1.6E-100 T 11-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 DB34_07900 03bb6a1a397595ca43befcebfa2a6f6b 676 SUPERFAMILY SSF50249 197 590 1.03E-102 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB34_01355 a1f32e373f3cfe303e27b63ab91a85bf 268 SUPERFAMILY SSF53474 18 265 8.18E-55 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold DB34_01355 a1f32e373f3cfe303e27b63ab91a85bf 268 Gene3D G3DSA:3.40.50.1820 19 267 9.1E-54 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold DB34_01355 a1f32e373f3cfe303e27b63ab91a85bf 268 Pfam PF00561 alpha/beta hydrolase fold 161 254 8.4E-7 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DB34_01355 a1f32e373f3cfe303e27b63ab91a85bf 268 Pfam PF00561 alpha/beta hydrolase fold 44 144 2.1E-17 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DB34_04945 d4b242bd83ccb9884b52a661f5153ed2 208 Gene3D G3DSA:3.10.450.710 29 204 9.6E-25 T 11-10-2018 DB34_04945 d4b242bd83ccb9884b52a661f5153ed2 208 Pfam PF05494 MlaC protein 43 197 2.6E-33 T 11-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC DB34_08065 4fe1e7bc847faa5227d2061c216e502c 306 Pfam PF00589 Phage integrase family 110 285 3.9E-44 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 DB34_08065 4fe1e7bc847faa5227d2061c216e502c 306 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 6 299 49.989 T 11-10-2018 IPR023009 Tyrosine recombinase XerC/XerD DB34_08065 4fe1e7bc847faa5227d2061c216e502c 306 Gene3D G3DSA:1.10.443.10 102 304 1.8E-53 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 DB34_08065 4fe1e7bc847faa5227d2061c216e502c 306 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 6 88 2.2E-17 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 DB34_08065 4fe1e7bc847faa5227d2061c216e502c 306 Gene3D G3DSA:1.10.150.130 5 98 2.1E-19 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal DB34_08065 4fe1e7bc847faa5227d2061c216e502c 306 SUPERFAMILY SSF56349 7 292 8.83E-56 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DB34_02770 4619421968df9c6a2f900dd4386275f7 290 SUPERFAMILY SSF51735 16 287 4.87E-31 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily DB34_02770 4619421968df9c6a2f900dd4386275f7 290 Gene3D G3DSA:3.40.50.720 14 290 4.9E-27 T 11-10-2018 DB34_02770 4619421968df9c6a2f900dd4386275f7 290 Pfam PF13460 NAD(P)H-binding 18 85 5.4E-7 T 11-10-2018 IPR016040 NAD(P)-binding domain DB34_01655 08d79861ad3725e0610fbd2c7f7ec953 386 Pfam PF00144 Beta-lactamase 38 364 9.2E-71 T 11-10-2018 IPR001466 Beta-lactamase-related DB34_01655 08d79861ad3725e0610fbd2c7f7ec953 386 SUPERFAMILY SSF56601 32 376 3.64E-87 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DB34_01655 08d79861ad3725e0610fbd2c7f7ec953 386 Gene3D G3DSA:3.40.710.10 19 380 2.2E-95 T 11-10-2018 DB34_02620 63dd2f6d8c1b8c7feb11f05067dce78b 590 Gene3D G3DSA:1.25.40.10 14 186 4.3E-26 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB34_02620 63dd2f6d8c1b8c7feb11f05067dce78b 590 SUPERFAMILY SSF81901 378 580 1.74E-45 T 11-10-2018 DB34_02620 63dd2f6d8c1b8c7feb11f05067dce78b 590 Gene3D G3DSA:1.25.40.10 376 589 3.8E-54 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB34_02620 63dd2f6d8c1b8c7feb11f05067dce78b 590 Gene3D G3DSA:1.25.40.10 187 375 3.0E-47 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB34_02620 63dd2f6d8c1b8c7feb11f05067dce78b 590 SMART SM00671 176 211 250.0 T 11-10-2018 IPR006597 Sel1-like repeat DB34_02620 63dd2f6d8c1b8c7feb11f05067dce78b 590 SMART SM00671 427 462 1.4E-4 T 11-10-2018 IPR006597 Sel1-like repeat DB34_02620 63dd2f6d8c1b8c7feb11f05067dce78b 590 SMART SM00671 356 391 30.0 T 11-10-2018 IPR006597 Sel1-like repeat DB34_02620 63dd2f6d8c1b8c7feb11f05067dce78b 590 SMART SM00671 140 175 0.064 T 11-10-2018 IPR006597 Sel1-like repeat DB34_02620 63dd2f6d8c1b8c7feb11f05067dce78b 590 SMART SM00671 284 319 2.3E-6 T 11-10-2018 IPR006597 Sel1-like repeat DB34_02620 63dd2f6d8c1b8c7feb11f05067dce78b 590 SMART SM00671 212 247 2.2E-4 T 11-10-2018 IPR006597 Sel1-like repeat DB34_02620 63dd2f6d8c1b8c7feb11f05067dce78b 590 SMART SM00671 48 83 0.0026 T 11-10-2018 IPR006597 Sel1-like repeat DB34_02620 63dd2f6d8c1b8c7feb11f05067dce78b 590 SMART SM00671 320 355 3.6E-8 T 11-10-2018 IPR006597 Sel1-like repeat DB34_02620 63dd2f6d8c1b8c7feb11f05067dce78b 590 SMART SM00671 248 283 0.067 T 11-10-2018 IPR006597 Sel1-like repeat DB34_02620 63dd2f6d8c1b8c7feb11f05067dce78b 590 SMART SM00671 392 426 1.3 T 11-10-2018 IPR006597 Sel1-like repeat DB34_02620 63dd2f6d8c1b8c7feb11f05067dce78b 590 SMART SM00671 84 139 27.0 T 11-10-2018 IPR006597 Sel1-like repeat DB34_02620 63dd2f6d8c1b8c7feb11f05067dce78b 590 SMART SM00671 535 570 3.8E-5 T 11-10-2018 IPR006597 Sel1-like repeat DB34_02620 63dd2f6d8c1b8c7feb11f05067dce78b 590 SMART SM00671 463 498 2.8E-6 T 11-10-2018 IPR006597 Sel1-like repeat DB34_02620 63dd2f6d8c1b8c7feb11f05067dce78b 590 SMART SM00671 499 534 2.9E-6 T 11-10-2018 IPR006597 Sel1-like repeat DB34_02620 63dd2f6d8c1b8c7feb11f05067dce78b 590 SUPERFAMILY SSF81901 34 98 1.39E-6 T 11-10-2018 DB34_02620 63dd2f6d8c1b8c7feb11f05067dce78b 590 SUPERFAMILY SSF81901 238 424 5.67E-41 T 11-10-2018 DB34_02620 63dd2f6d8c1b8c7feb11f05067dce78b 590 SUPERFAMILY SSF81901 122 257 8.02E-25 T 11-10-2018 DB34_02620 63dd2f6d8c1b8c7feb11f05067dce78b 590 Pfam PF08238 Sel1 repeat 326 355 1.4E-6 T 11-10-2018 IPR006597 Sel1-like repeat DB34_02620 63dd2f6d8c1b8c7feb11f05067dce78b 590 Pfam PF08238 Sel1 repeat 536 569 1.5E-4 T 11-10-2018 IPR006597 Sel1-like repeat DB34_02620 63dd2f6d8c1b8c7feb11f05067dce78b 590 Pfam PF08238 Sel1 repeat 250 283 3.0E-4 T 11-10-2018 IPR006597 Sel1-like repeat DB34_02620 63dd2f6d8c1b8c7feb11f05067dce78b 590 Pfam PF08238 Sel1 repeat 429 461 1.4E-5 T 11-10-2018 IPR006597 Sel1-like repeat DB34_02620 63dd2f6d8c1b8c7feb11f05067dce78b 590 Pfam PF08238 Sel1 repeat 48 82 0.0049 T 11-10-2018 IPR006597 Sel1-like repeat DB34_02620 63dd2f6d8c1b8c7feb11f05067dce78b 590 Pfam PF08238 Sel1 repeat 121 139 0.22 T 11-10-2018 IPR006597 Sel1-like repeat DB34_02620 63dd2f6d8c1b8c7feb11f05067dce78b 590 Pfam PF08238 Sel1 repeat 394 424 0.0034 T 11-10-2018 IPR006597 Sel1-like repeat DB34_02620 63dd2f6d8c1b8c7feb11f05067dce78b 590 Pfam PF08238 Sel1 repeat 464 498 2.0E-4 T 11-10-2018 IPR006597 Sel1-like repeat DB34_02620 63dd2f6d8c1b8c7feb11f05067dce78b 590 Pfam PF08238 Sel1 repeat 141 174 1.9E-4 T 11-10-2018 IPR006597 Sel1-like repeat DB34_02620 63dd2f6d8c1b8c7feb11f05067dce78b 590 Pfam PF08238 Sel1 repeat 284 319 2.6E-5 T 11-10-2018 IPR006597 Sel1-like repeat DB34_02620 63dd2f6d8c1b8c7feb11f05067dce78b 590 Pfam PF08238 Sel1 repeat 215 245 0.037 T 11-10-2018 IPR006597 Sel1-like repeat DB34_02620 63dd2f6d8c1b8c7feb11f05067dce78b 590 Pfam PF08238 Sel1 repeat 84 108 170.0 T 11-10-2018 IPR006597 Sel1-like repeat DB34_02620 63dd2f6d8c1b8c7feb11f05067dce78b 590 Pfam PF08238 Sel1 repeat 500 534 4.5E-7 T 11-10-2018 IPR006597 Sel1-like repeat DB34_11060 56989e3cd94f1a8614dadf31a34a8c15 336 Pfam PF01180 Dihydroorotate dehydrogenase 10 291 4.2E-7 T 11-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 DB34_11060 56989e3cd94f1a8614dadf31a34a8c15 336 PIRSF PIRSF000164 1 308 1.4E-28 T 11-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 DB34_11060 56989e3cd94f1a8614dadf31a34a8c15 336 Gene3D G3DSA:3.20.20.70 2 309 5.6E-47 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB34_11060 56989e3cd94f1a8614dadf31a34a8c15 336 SUPERFAMILY SSF51395 3 306 2.53E-47 T 11-10-2018 DB34_02285 ff9bb4cce47989c122e92cf67d03d000 558 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 200 305 7.7E-19 T 11-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 DB34_02285 ff9bb4cce47989c122e92cf67d03d000 558 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 405 529 2.7E-20 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 DB34_02285 ff9bb4cce47989c122e92cf67d03d000 558 SUPERFAMILY SSF52518 3 179 4.95E-44 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold DB34_02285 ff9bb4cce47989c122e92cf67d03d000 558 Gene3D G3DSA:3.40.50.970 1 180 2.0E-62 T 11-10-2018 DB34_02285 ff9bb4cce47989c122e92cf67d03d000 558 Gene3D G3DSA:3.40.50.1220 190 347 1.9E-56 T 11-10-2018 DB34_02285 ff9bb4cce47989c122e92cf67d03d000 558 SUPERFAMILY SSF52467 166 342 1.05E-28 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily DB34_02285 ff9bb4cce47989c122e92cf67d03d000 558 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 175 2.5E-33 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 DB34_02285 ff9bb4cce47989c122e92cf67d03d000 558 PIRSF PIRSF036565 1 553 1.0E-199 T 11-10-2018 IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme GO:0016831 DB34_02285 ff9bb4cce47989c122e92cf67d03d000 558 SUPERFAMILY SSF52518 361 553 6.43E-49 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold DB34_02285 ff9bb4cce47989c122e92cf67d03d000 558 Gene3D G3DSA:3.40.50.970 354 540 9.4E-59 T 11-10-2018 DB34_01310 6c470d73f4c4923b0adcc53085a0e952 276 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 18 45 2.0E-42 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DB34_01310 6c470d73f4c4923b0adcc53085a0e952 276 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 116 142 2.0E-42 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DB34_01310 6c470d73f4c4923b0adcc53085a0e952 276 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 98 116 2.0E-42 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DB34_01310 6c470d73f4c4923b0adcc53085a0e952 276 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 174 202 2.0E-42 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DB34_01310 6c470d73f4c4923b0adcc53085a0e952 276 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 19 246 2.6E-64 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DB34_01310 6c470d73f4c4923b0adcc53085a0e952 276 ProSitePatterns PS01218 TatC family signature. 174 193 - T 11-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site DB34_01310 6c470d73f4c4923b0adcc53085a0e952 276 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 5 259 16.894 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DB34_01310 6c470d73f4c4923b0adcc53085a0e952 276 Pfam PF00902 Sec-independent protein translocase protein (TatC) 21 241 4.7E-67 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DB34_05435 c4140d05114b1e229dd7d8bffc94df45 492 SMART SM00382 24 214 0.0078 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_05435 c4140d05114b1e229dd7d8bffc94df45 492 Gene3D G3DSA:3.40.50.300 25 246 3.5E-33 T 11-10-2018 DB34_05435 c4140d05114b1e229dd7d8bffc94df45 492 Pfam PF01935 Domain of unknown function DUF87 15 76 2.9E-7 T 11-10-2018 IPR002789 Helicase HerA, central domain DB34_05435 c4140d05114b1e229dd7d8bffc94df45 492 SUPERFAMILY SSF52540 5 256 9.18E-27 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_05435 c4140d05114b1e229dd7d8bffc94df45 492 PIRSF PIRSF034081 1 492 8.9E-223 T 11-10-2018 IPR014588 ATPase, Atu1862 type, predicted DB34_12650 cfcc21a124d3fc38644749d70e2de3a9 185 Gene3D G3DSA:3.30.1450.10 38 126 3.2E-6 T 11-10-2018 IPR037873 BamE-like DB34_12650 cfcc21a124d3fc38644749d70e2de3a9 185 Pfam PF04355 SmpA / OmlA family 39 113 1.2E-13 T 11-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 DB34_09510 d197ad010b1d639401d85d936939b627 1158 Gene3D G3DSA:3.90.1150.50 1007 1151 2.3E-36 T 11-10-2018 IPR037235 TRCF-like, C-terminal domain DB34_09510 d197ad010b1d639401d85d936939b627 1158 Gene3D G3DSA:3.40.50.300 544 783 6.3E-216 T 11-10-2018 DB34_09510 d197ad010b1d639401d85d936939b627 1158 Gene3D G3DSA:2.30.30.840 486 543 6.3E-216 T 11-10-2018 DB34_09510 d197ad010b1d639401d85d936939b627 1158 SUPERFAMILY SSF52540 526 785 3.76E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_09510 d197ad010b1d639401d85d936939b627 1158 Pfam PF00271 Helicase conserved C-terminal domain 809 911 2.6E-16 T 11-10-2018 IPR001650 Helicase, C-terminal DB34_09510 d197ad010b1d639401d85d936939b627 1158 SUPERFAMILY SSF52540 784 992 2.24E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_09510 d197ad010b1d639401d85d936939b627 1158 SMART SM00982 1010 1110 1.4E-46 T 11-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 DB34_09510 d197ad010b1d639401d85d936939b627 1158 Pfam PF00270 DEAD/DEAH box helicase 607 764 4.5E-17 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DB34_09510 d197ad010b1d639401d85d936939b627 1158 SUPERFAMILY SSF143517 1001 1149 3.14E-37 T 11-10-2018 IPR037235 TRCF-like, C-terminal domain DB34_09510 d197ad010b1d639401d85d936939b627 1158 Gene3D G3DSA:3.40.50.300 481 991 6.3E-216 T 11-10-2018 DB34_09510 d197ad010b1d639401d85d936939b627 1158 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 144 1083 0.0 T 11-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 DB34_09510 d197ad010b1d639401d85d936939b627 1158 Pfam PF03461 TRCF domain 1013 1103 3.6E-28 T 11-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 DB34_09510 d197ad010b1d639401d85d936939b627 1158 SUPERFAMILY SSF52540 373 473 2.32E-20 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_09510 d197ad010b1d639401d85d936939b627 1158 Gene3D G3DSA:3.40.50.11180 34 325 5.5E-93 T 11-10-2018 DB34_09510 d197ad010b1d639401d85d936939b627 1158 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 23 1136 27.072 T 11-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 DB34_09510 d197ad010b1d639401d85d936939b627 1158 Pfam PF02559 CarD-like/TRCF domain 483 576 8.5E-23 T 11-10-2018 IPR003711 CarD-like/TRCF domain DB34_09510 d197ad010b1d639401d85d936939b627 1158 SMART SM00490 828 912 1.5E-19 T 11-10-2018 IPR001650 Helicase, C-terminal DB34_09510 d197ad010b1d639401d85d936939b627 1158 SUPERFAMILY SSF141259 474 550 1.14E-17 T 11-10-2018 IPR036101 CarD-like/TRCF domain superfamily DB34_09510 d197ad010b1d639401d85d936939b627 1158 SMART SM01058 482 578 5.0E-40 T 11-10-2018 IPR003711 CarD-like/TRCF domain DB34_09510 d197ad010b1d639401d85d936939b627 1158 SMART SM00487 602 792 1.4E-33 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DB34_09510 d197ad010b1d639401d85d936939b627 1158 SUPERFAMILY SSF52540 8 345 7.61E-93 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_09510 d197ad010b1d639401d85d936939b627 1158 Gene3D G3DSA:3.30.2060.10 127 213 5.5E-93 T 11-10-2018 DB34_05090 ede98eb092a3dff2c5ba9aeb2afc386d 221 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 110 191 2.5E-7 T 11-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 DB34_05090 ede98eb092a3dff2c5ba9aeb2afc386d 221 Gene3D G3DSA:2.60.120.620 21 213 4.0E-15 T 11-10-2018 DB34_01910 d35f2779ade2a0f56bec313430dbbb05 745 Pfam PF04632 Fusaric acid resistance protein family 40 717 2.3E-145 T 11-10-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0022857|GO:0055085 DB34_00360 1a2c1712de44016a1b3c7c7379540b10 335 SUPERFAMILY SSF53335 16 324 1.99E-45 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB34_00360 1a2c1712de44016a1b3c7c7379540b10 335 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 14 324 7.9E-86 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 DB34_00360 1a2c1712de44016a1b3c7c7379540b10 335 Pfam PF01795 MraW methylase family 15 324 1.6E-92 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 DB34_00360 1a2c1712de44016a1b3c7c7379540b10 335 SUPERFAMILY SSF81799 128 226 5.23E-34 T 11-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 DB34_00360 1a2c1712de44016a1b3c7c7379540b10 335 Gene3D G3DSA:1.10.150.170 126 227 9.4E-101 T 11-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 DB34_00360 1a2c1712de44016a1b3c7c7379540b10 335 PIRSF PIRSF004486 10 326 1.4E-99 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 DB34_00360 1a2c1712de44016a1b3c7c7379540b10 335 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 16 325 35.883 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 DB34_00360 1a2c1712de44016a1b3c7c7379540b10 335 Gene3D G3DSA:3.40.50.150 16 322 9.4E-101 T 11-10-2018 DB34_05835 4dc1e6cf5ccb2bc107f07aa010d1977d 268 Pfam PF03306 Alpha-acetolactate decarboxylase 37 254 4.6E-82 T 11-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 DB34_05835 4dc1e6cf5ccb2bc107f07aa010d1977d 268 Gene3D G3DSA:3.30.1330.80 37 253 4.6E-82 T 11-10-2018 DB34_05835 4dc1e6cf5ccb2bc107f07aa010d1977d 268 Gene3D G3DSA:3.30.1330.80 112 234 4.6E-82 T 11-10-2018 DB34_05835 4dc1e6cf5ccb2bc107f07aa010d1977d 268 SUPERFAMILY SSF117856 35 266 3.66E-77 T 11-10-2018 DB34_05835 4dc1e6cf5ccb2bc107f07aa010d1977d 268 PIRSF PIRSF001332 10 267 9.2E-96 T 11-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 DB34_05835 4dc1e6cf5ccb2bc107f07aa010d1977d 268 TIGRFAM TIGR01252 acetolac_decarb: alpha-acetolactate decarboxylase 35 266 1.2E-84 T 11-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 DB34_07040 721615b661bc04e5e61b5d304c63c36c 733 SUPERFAMILY SSF55486 87 733 4.15E-206 T 11-10-2018 DB34_07040 721615b661bc04e5e61b5d304c63c36c 733 Gene3D G3DSA:1.10.1380.10 124 516 7.1E-230 T 11-10-2018 DB34_07040 721615b661bc04e5e61b5d304c63c36c 733 Pfam PF01431 Peptidase family M13 529 730 2.6E-67 T 11-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 DB34_07040 721615b661bc04e5e61b5d304c63c36c 733 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 521 533 1.8E-20 T 11-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 DB34_07040 721615b661bc04e5e61b5d304c63c36c 733 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 631 642 1.8E-20 T 11-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 DB34_07040 721615b661bc04e5e61b5d304c63c36c 733 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 539 551 1.8E-20 T 11-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 DB34_07040 721615b661bc04e5e61b5d304c63c36c 733 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 560 576 1.8E-20 T 11-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 DB34_07040 721615b661bc04e5e61b5d304c63c36c 733 Gene3D G3DSA:3.40.390.10 93 733 7.1E-230 T 11-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 DB34_07040 721615b661bc04e5e61b5d304c63c36c 733 Pfam PF05649 Peptidase family M13 98 477 1.9E-100 T 11-10-2018 IPR008753 Peptidase M13, N-terminal domain GO:0006508 DB34_07110 7f4e31dbec7986ce0c13c5261549378c 351 SMART SM00320 220 258 9.7 T 11-10-2018 IPR001680 WD40 repeat GO:0005515 DB34_07110 7f4e31dbec7986ce0c13c5261549378c 351 SMART SM00320 265 305 6.8 T 11-10-2018 IPR001680 WD40 repeat GO:0005515 DB34_07110 7f4e31dbec7986ce0c13c5261549378c 351 SMART SM00320 139 176 1.2 T 11-10-2018 IPR001680 WD40 repeat GO:0005515 DB34_07110 7f4e31dbec7986ce0c13c5261549378c 351 SMART SM00320 308 347 11.0 T 11-10-2018 IPR001680 WD40 repeat GO:0005515 DB34_07110 7f4e31dbec7986ce0c13c5261549378c 351 SMART SM00320 56 95 11.0 T 11-10-2018 IPR001680 WD40 repeat GO:0005515 DB34_07110 7f4e31dbec7986ce0c13c5261549378c 351 Gene3D G3DSA:2.130.10.10 11 257 3.9E-22 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 DB34_07110 7f4e31dbec7986ce0c13c5261549378c 351 SUPERFAMILY SSF50998 33 348 8.63E-38 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily DB34_07110 7f4e31dbec7986ce0c13c5261549378c 351 Pfam PF00400 WD domain, G-beta repeat 229 252 0.029 T 11-10-2018 IPR001680 WD40 repeat GO:0005515 DB34_07110 7f4e31dbec7986ce0c13c5261549378c 351 Gene3D G3DSA:2.130.10.10 258 351 3.0E-11 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 DB34_11875 1f7ba256f7ec7aacff7befd667122b86 541 Pfam PF02321 Outer membrane efflux protein 330 526 2.6E-18 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DB34_11875 1f7ba256f7ec7aacff7befd667122b86 541 Pfam PF02321 Outer membrane efflux protein 89 304 2.5E-24 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DB34_11875 1f7ba256f7ec7aacff7befd667122b86 541 PIRSF PIRSF001892 5 537 1.3E-160 T 11-10-2018 IPR028351 Cyclolysin transport protein CyaE GO:0005215 DB34_11875 1f7ba256f7ec7aacff7befd667122b86 541 SUPERFAMILY SSF56954 5 531 3.66E-73 T 11-10-2018 DB34_11875 1f7ba256f7ec7aacff7befd667122b86 541 Gene3D G3DSA:1.20.1600.10 87 537 9.3E-73 T 11-10-2018 DB34_08165 0c60ee62162fdd66f2835b2c206107a2 294 TIGRFAM TIGR01694 MTAP: methylthioadenosine phosphorylase 11 249 2.0E-98 T 11-10-2018 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 Reactome: R-HSA-1237112|Reactome: R-HSA-8950505 DB34_08165 0c60ee62162fdd66f2835b2c206107a2 294 Hamap MF_01963 S-methyl-5'-thioadenosine phosphorylase [mtnP]. 9 276 42.417 T 11-10-2018 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 Reactome: R-HSA-1237112|Reactome: R-HSA-8950505 DB34_08165 0c60ee62162fdd66f2835b2c206107a2 294 SUPERFAMILY SSF53167 9 276 8.9E-96 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 DB34_08165 0c60ee62162fdd66f2835b2c206107a2 294 Gene3D G3DSA:3.40.50.1580 1 290 1.8E-102 T 11-10-2018 DB34_08165 0c60ee62162fdd66f2835b2c206107a2 294 ProSitePatterns PS01240 Purine and other phosphorylases family 2 signature. 57 97 - T 11-10-2018 IPR018099 Purine phosphorylase, family 2, conserved site GO:0016763 DB34_08165 0c60ee62162fdd66f2835b2c206107a2 294 Pfam PF01048 Phosphorylase superfamily 11 249 1.6E-43 T 11-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 DB34_07815 3af8736bb5fed0dfae7f3a81164527bb 181 Gene3D G3DSA:2.60.120.10 2 157 5.9E-46 T 11-10-2018 IPR014710 RmlC-like jelly roll fold DB34_07815 3af8736bb5fed0dfae7f3a81164527bb 181 SUPERFAMILY SSF51182 3 179 8.13E-38 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily DB34_07815 3af8736bb5fed0dfae7f3a81164527bb 181 Hamap MF_01682 Acireductone dioxygenase [mtnD]. 1 172 35.012 T 11-10-2018 IPR023956 Acireductone dioxygenase ARD, bacteria GO:0005506|GO:0010308|GO:0010309|GO:0016151|GO:0019284|GO:0055114 KEGG: 00270+1.13.11.54+1.13.11.53|MetaCyc: PWY-4361|MetaCyc: PWY-5389 DB34_07815 3af8736bb5fed0dfae7f3a81164527bb 181 Pfam PF03079 ARD/ARD' family 5 165 5.6E-32 T 11-10-2018 IPR004313 Acireductone dioxygenase ARD family GO:0010309|GO:0055114 KEGG: 00270+1.13.11.54|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 DB34_00380 d45577a4c226d773c57670443ec08bfc 461 Pfam PF02875 Mur ligase family, glutamate ligase domain 320 398 2.9E-11 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 DB34_00380 d45577a4c226d773c57670443ec08bfc 461 Gene3D G3DSA:3.90.190.20 316 453 4.9E-32 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DB34_00380 d45577a4c226d773c57670443ec08bfc 461 Pfam PF01225 Mur ligase family, catalytic domain 26 73 7.0E-11 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 DB34_00380 d45577a4c226d773c57670443ec08bfc 461 Gene3D G3DSA:3.40.1390.10 3 82 5.7E-20 T 11-10-2018 DB34_00380 d45577a4c226d773c57670443ec08bfc 461 SUPERFAMILY SSF53623 104 316 2.35E-50 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DB34_00380 d45577a4c226d773c57670443ec08bfc 461 Pfam PF08245 Mur ligase middle domain 108 297 1.9E-41 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 DB34_00380 d45577a4c226d773c57670443ec08bfc 461 Gene3D G3DSA:3.40.1190.10 84 315 1.4E-61 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DB34_00380 d45577a4c226d773c57670443ec08bfc 461 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 1 453 30.712 T 11-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DB34_00380 d45577a4c226d773c57670443ec08bfc 461 SUPERFAMILY SSF53244 320 452 1.68E-29 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DB34_00380 d45577a4c226d773c57670443ec08bfc 461 SUPERFAMILY SSF63418 5 99 6.28E-22 T 11-10-2018 IPR035911 MurE/MurF, N-terminal DB34_00380 d45577a4c226d773c57670443ec08bfc 461 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 31 452 5.9E-117 T 11-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DB34_13000 8cae487b8ea5006ea7adedb30107288c 112 SMART SM00938 4 105 9.0E-61 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DB34_13000 8cae487b8ea5006ea7adedb30107288c 112 PIRSF PIRSF039144 1 112 1.4E-53 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DB34_13000 8cae487b8ea5006ea7adedb30107288c 112 PRINTS PR00340 P-II protein signature 83 103 2.8E-41 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DB34_13000 8cae487b8ea5006ea7adedb30107288c 112 PRINTS PR00340 P-II protein signature 23 41 2.8E-41 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DB34_13000 8cae487b8ea5006ea7adedb30107288c 112 PRINTS PR00340 P-II protein signature 52 75 2.8E-41 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DB34_13000 8cae487b8ea5006ea7adedb30107288c 112 PRINTS PR00340 P-II protein signature 2 17 2.8E-41 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DB34_13000 8cae487b8ea5006ea7adedb30107288c 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 11-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 DB34_13000 8cae487b8ea5006ea7adedb30107288c 112 Gene3D G3DSA:3.30.70.120 1 112 5.5E-45 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal DB34_13000 8cae487b8ea5006ea7adedb30107288c 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 11-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 DB34_13000 8cae487b8ea5006ea7adedb30107288c 112 SUPERFAMILY SSF54913 1 112 7.63E-43 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta DB34_13000 8cae487b8ea5006ea7adedb30107288c 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 5.6E-41 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DB34_09730 28c8a4abad705c33443ae09bda60d59a 292 SUPERFAMILY SSF52402 4 80 4.69E-6 T 11-10-2018 DB34_09730 28c8a4abad705c33443ae09bda60d59a 292 Pfam PF00582 Universal stress protein family 172 291 4.2E-9 T 11-10-2018 IPR006016 UspA DB34_09730 28c8a4abad705c33443ae09bda60d59a 292 SUPERFAMILY SSF52402 171 292 3.52E-17 T 11-10-2018 DB34_09730 28c8a4abad705c33443ae09bda60d59a 292 Gene3D G3DSA:3.40.50.12370 5 292 1.1E-24 T 11-10-2018 DB34_09730 28c8a4abad705c33443ae09bda60d59a 292 PRINTS PR01438 Universal stress protein signature 270 292 1.2E-5 T 11-10-2018 IPR006015 Universal stress protein A DB34_09730 28c8a4abad705c33443ae09bda60d59a 292 PRINTS PR01438 Universal stress protein signature 252 264 1.2E-5 T 11-10-2018 IPR006015 Universal stress protein A DB34_09730 28c8a4abad705c33443ae09bda60d59a 292 PRINTS PR01438 Universal stress protein signature 4 22 1.2E-5 T 11-10-2018 IPR006015 Universal stress protein A DB34_10545 3d272e15c8e69a446c965d5fb17d012d 184 SUPERFAMILY SSF46689 1 69 4.1E-14 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB34_10545 3d272e15c8e69a446c965d5fb17d012d 184 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 58 7.2E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB34_10545 3d272e15c8e69a446c965d5fb17d012d 184 Gene3D G3DSA:1.10.357.10 4 183 2.2E-36 T 11-10-2018 DB34_10545 3d272e15c8e69a446c965d5fb17d012d 184 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 1.6E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB34_10545 3d272e15c8e69a446c965d5fb17d012d 184 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 1.6E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB34_02200 3e64217a0141befb339b2dbe63e7c0fd 1105 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 771 877 5.8E-25 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB34_02200 3e64217a0141befb339b2dbe63e7c0fd 1105 Pfam PF00512 His Kinase A (phospho-acceptor) domain 658 724 1.1E-14 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DB34_02200 3e64217a0141befb339b2dbe63e7c0fd 1105 SMART SM00448 900 1012 7.8E-17 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB34_02200 3e64217a0141befb339b2dbe63e7c0fd 1105 Gene3D G3DSA:3.30.565.10 725 881 2.3E-44 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB34_02200 3e64217a0141befb339b2dbe63e7c0fd 1105 SUPERFAMILY SSF47384 642 725 2.35E-19 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DB34_02200 3e64217a0141befb339b2dbe63e7c0fd 1105 Gene3D G3DSA:1.10.287.130 644 724 6.8E-21 T 11-10-2018 DB34_02200 3e64217a0141befb339b2dbe63e7c0fd 1105 Gene3D G3DSA:1.10.4160.10 23 478 7.3E-11 T 11-10-2018 IPR038271 Purine-cytosine permease superfamily DB34_02200 3e64217a0141befb339b2dbe63e7c0fd 1105 Pfam PF00072 Response regulator receiver domain 903 1012 2.8E-19 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB34_02200 3e64217a0141befb339b2dbe63e7c0fd 1105 SMART SM00388 658 724 2.1E-18 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DB34_02200 3e64217a0141befb339b2dbe63e7c0fd 1105 SUPERFAMILY SSF52172 899 1028 3.56E-28 T 11-10-2018 IPR011006 CheY-like superfamily DB34_02200 3e64217a0141befb339b2dbe63e7c0fd 1105 SUPERFAMILY SSF55874 714 875 3.54E-44 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB34_02200 3e64217a0141befb339b2dbe63e7c0fd 1105 PRINTS PR00344 Bacterial sensor protein C-terminal signature 806 820 4.0E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB34_02200 3e64217a0141befb339b2dbe63e7c0fd 1105 PRINTS PR00344 Bacterial sensor protein C-terminal signature 824 834 4.0E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB34_02200 3e64217a0141befb339b2dbe63e7c0fd 1105 PRINTS PR00344 Bacterial sensor protein C-terminal signature 863 876 4.0E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB34_02200 3e64217a0141befb339b2dbe63e7c0fd 1105 PRINTS PR00344 Bacterial sensor protein C-terminal signature 839 857 4.0E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB34_02200 3e64217a0141befb339b2dbe63e7c0fd 1105 Gene3D G3DSA:3.40.50.2300 896 1020 2.4E-26 T 11-10-2018 DB34_02200 3e64217a0141befb339b2dbe63e7c0fd 1105 SMART SM00387 770 879 6.0E-36 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB34_08970 1c9a215b5a62b597869c85c465a1727a 454 Pfam PF09312 SurA N-terminal domain 53 161 2.1E-9 T 11-10-2018 IPR015391 SurA N-terminal DB34_08970 1c9a215b5a62b597869c85c465a1727a 454 Gene3D G3DSA:3.10.50.40 192 301 6.3E-25 T 11-10-2018 DB34_08970 1c9a215b5a62b597869c85c465a1727a 454 SUPERFAMILY SSF109998 54 213 3.3E-25 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily DB34_08970 1c9a215b5a62b597869c85c465a1727a 454 SUPERFAMILY SSF54534 196 297 1.24E-18 T 11-10-2018 DB34_08970 1c9a215b5a62b597869c85c465a1727a 454 Gene3D G3DSA:1.10.4030.10 48 172 4.7E-20 T 11-10-2018 DB34_08970 1c9a215b5a62b597869c85c465a1727a 454 Pfam PF00639 PPIC-type PPIASE domain 203 294 1.4E-10 T 11-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 DB34_05315 9130a6be326d0817673691e965d562e9 634 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 598 2.1E-298 T 11-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 DB34_05315 9130a6be326d0817673691e965d562e9 634 Gene3D G3DSA:3.30.420.40 5 372 9.5E-164 T 11-10-2018 DB34_05315 9130a6be326d0817673691e965d562e9 634 SUPERFAMILY SSF53067 186 377 2.14E-67 T 11-10-2018 DB34_05315 9130a6be326d0817673691e965d562e9 634 Gene3D G3DSA:2.60.34.10 378 518 3.1E-67 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 DB34_05315 9130a6be326d0817673691e965d562e9 634 Pfam PF00012 Hsp70 protein 4 598 4.3E-274 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DB34_05315 9130a6be326d0817673691e965d562e9 634 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 628 37.477 T 11-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 DB34_05315 9130a6be326d0817673691e965d562e9 634 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 191 204 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 DB34_05315 9130a6be326d0817673691e965d562e9 634 PRINTS PR00301 70kDa heat shock protein signature 360 380 1.3E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DB34_05315 9130a6be326d0817673691e965d562e9 634 PRINTS PR00301 70kDa heat shock protein signature 138 158 1.3E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DB34_05315 9130a6be326d0817673691e965d562e9 634 PRINTS PR00301 70kDa heat shock protein signature 329 345 1.3E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DB34_05315 9130a6be326d0817673691e965d562e9 634 PRINTS PR00301 70kDa heat shock protein signature 197 207 1.3E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DB34_05315 9130a6be326d0817673691e965d562e9 634 PRINTS PR00301 70kDa heat shock protein signature 464 480 1.3E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DB34_05315 9130a6be326d0817673691e965d562e9 634 PRINTS PR00301 70kDa heat shock protein signature 3 16 1.3E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DB34_05315 9130a6be326d0817673691e965d562e9 634 PRINTS PR00301 70kDa heat shock protein signature 31 43 1.3E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DB34_05315 9130a6be326d0817673691e965d562e9 634 PRINTS PR00301 70kDa heat shock protein signature 383 402 1.3E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DB34_05315 9130a6be326d0817673691e965d562e9 634 PRINTS PR00301 70kDa heat shock protein signature 54 62 1.3E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DB34_05315 9130a6be326d0817673691e965d562e9 634 Gene3D G3DSA:3.30.30.30 67 118 9.5E-164 T 11-10-2018 DB34_05315 9130a6be326d0817673691e965d562e9 634 SUPERFAMILY SSF53067 4 184 1.49E-66 T 11-10-2018 DB34_05315 9130a6be326d0817673691e965d562e9 634 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 DB34_05315 9130a6be326d0817673691e965d562e9 634 SUPERFAMILY SSF100920 379 535 1.57E-62 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 DB34_05315 9130a6be326d0817673691e965d562e9 634 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 332 346 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 DB34_05315 9130a6be326d0817673691e965d562e9 634 Gene3D G3DSA:3.90.640.10 223 310 9.5E-164 T 11-10-2018 DB34_05315 9130a6be326d0817673691e965d562e9 634 Gene3D G3DSA:1.20.1270.10 519 601 1.1E-25 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 DB34_05315 9130a6be326d0817673691e965d562e9 634 Gene3D G3DSA:3.30.420.40 184 357 9.5E-164 T 11-10-2018 DB34_07785 e23cbf54247298d88a2d1a9629e0fcf6 402 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 211 248 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DB34_07785 e23cbf54247298d88a2d1a9629e0fcf6 402 PIRSF PIRSF000521 8 149 5.2E-11 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DB34_07785 e23cbf54247298d88a2d1a9629e0fcf6 402 PIRSF PIRSF000521 159 388 1.7E-34 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DB34_07785 e23cbf54247298d88a2d1a9629e0fcf6 402 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 5 385 6.0E-144 T 11-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 DB34_07785 e23cbf54247298d88a2d1a9629e0fcf6 402 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 4 388 68.708 T 11-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 DB34_07785 e23cbf54247298d88a2d1a9629e0fcf6 402 Pfam PF00202 Aminotransferase class-III 14 385 1.5E-116 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DB34_07785 e23cbf54247298d88a2d1a9629e0fcf6 402 SUPERFAMILY SSF53383 4 386 2.78E-123 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB34_07785 e23cbf54247298d88a2d1a9629e0fcf6 402 Gene3D G3DSA:3.90.1150.10 13 378 2.4E-140 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB34_07785 e23cbf54247298d88a2d1a9629e0fcf6 402 Gene3D G3DSA:3.40.640.10 48 293 2.4E-140 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB34_07210 75e3ba222b5becbf8a8401722a381ffb 384 SUPERFAMILY SSF103473 17 380 1.16E-32 T 11-10-2018 IPR036259 MFS transporter superfamily DB34_07210 75e3ba222b5becbf8a8401722a381ffb 384 Gene3D G3DSA:1.20.1250.20 204 384 1.1E-14 T 11-10-2018 DB34_07210 75e3ba222b5becbf8a8401722a381ffb 384 Pfam PF07690 Major Facilitator Superfamily 213 379 4.6E-12 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DB34_07210 75e3ba222b5becbf8a8401722a381ffb 384 Pfam PF07690 Major Facilitator Superfamily 22 189 1.2E-10 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DB34_07210 75e3ba222b5becbf8a8401722a381ffb 384 Gene3D G3DSA:1.20.1250.20 14 196 4.3E-14 T 11-10-2018 DB34_08285 3ec9823e98c4ef49aa6aa21a2837109f 933 Pfam PF13779 Domain of unknown function (DUF4175) 38 931 2.3E-216 T 11-10-2018 IPR012683 Conserved hypothetical protein CHP02302, transmembrane DB34_01205 d803cdeaaaae06d68baababd83fbf890 486 SUPERFAMILY SSF51905 3 372 1.97E-64 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_01205 d803cdeaaaae06d68baababd83fbf890 486 Gene3D G3DSA:3.50.50.60 5 336 4.5E-108 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_01205 d803cdeaaaae06d68baababd83fbf890 486 Pfam PF01494 FAD binding domain 4 336 3.2E-79 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 DB34_01205 d803cdeaaaae06d68baababd83fbf890 486 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 305 323 9.9E-45 T 11-10-2018 DB34_01205 d803cdeaaaae06d68baababd83fbf890 486 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 9.9E-45 T 11-10-2018 DB34_01205 d803cdeaaaae06d68baababd83fbf890 486 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 150 165 9.9E-45 T 11-10-2018 DB34_01205 d803cdeaaaae06d68baababd83fbf890 486 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 272 287 9.9E-45 T 11-10-2018 DB34_01205 d803cdeaaaae06d68baababd83fbf890 486 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 323 339 9.9E-45 T 11-10-2018 DB34_01205 d803cdeaaaae06d68baababd83fbf890 486 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 287 303 9.9E-45 T 11-10-2018 DB34_01205 d803cdeaaaae06d68baababd83fbf890 486 Gene3D G3DSA:3.30.70.2450 179 261 4.5E-108 T 11-10-2018 DB34_09135 0baee0240c5c1a19b17f5030ce9697b0 119 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 113 1.2E-47 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_09135 0baee0240c5c1a19b17f5030ce9697b0 119 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 29.099 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_09135 0baee0240c5c1a19b17f5030ce9697b0 119 Gene3D G3DSA:1.10.1900.20 56 119 9.2E-29 T 11-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_09135 0baee0240c5c1a19b17f5030ce9697b0 119 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_09135 0baee0240c5c1a19b17f5030ce9697b0 119 SUPERFAMILY SSF74731 3 117 2.75E-47 T 11-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_09135 0baee0240c5c1a19b17f5030ce9697b0 119 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 20 72 3.0E-23 T 11-10-2018 DB34_09135 0baee0240c5c1a19b17f5030ce9697b0 119 Gene3D G3DSA:1.10.720.90 2 55 1.4E-22 T 11-10-2018 DB34_09135 0baee0240c5c1a19b17f5030ce9697b0 119 PRINTS PR00062 Ribosomal protein L20 signature 42 71 9.9E-38 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_09135 0baee0240c5c1a19b17f5030ce9697b0 119 PRINTS PR00062 Ribosomal protein L20 signature 75 101 9.9E-38 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_09135 0baee0240c5c1a19b17f5030ce9697b0 119 PRINTS PR00062 Ribosomal protein L20 signature 12 41 9.9E-38 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_09135 0baee0240c5c1a19b17f5030ce9697b0 119 Pfam PF00453 Ribosomal protein L20 3 109 1.8E-47 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_12730 81f8521dabab55f5b2b101e89755224e 255 SUPERFAMILY SSF160909 15 247 1.96E-66 T 11-10-2018 DB34_12730 81f8521dabab55f5b2b101e89755224e 255 Gene3D G3DSA:3.30.2180.30 12 75 2.3E-18 T 11-10-2018 DB34_12730 81f8521dabab55f5b2b101e89755224e 255 Gene3D G3DSA:1.10.3580.10 82 252 1.1E-50 T 11-10-2018 IPR023335 ATP12 orthogonal Bundle domain superfamily DB34_12730 81f8521dabab55f5b2b101e89755224e 255 Pfam PF07542 ATP12 chaperone protein 19 141 1.3E-29 T 11-10-2018 IPR011419 ATP12, ATP synthase F1-assembly protein GO:0043461 DB34_03215 6913d62e364eb525ce6bc962e309af55 312 Gene3D G3DSA:3.30.930.30 52 190 1.0E-11 T 11-10-2018 DB34_03215 6913d62e364eb525ce6bc962e309af55 312 Pfam PF01076 Plasmid recombination enzyme 96 142 3.1E-6 T 11-10-2018 IPR001668 Plasmid recombination enzyme GO:0003677|GO:0005727|GO:0006310 DB34_02880 33651a8dd96b0b27796f1d5b0cdf1abd 150 Pfam PF01037 Lrp/AsnC ligand binding domain 68 141 3.1E-23 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DB34_02880 33651a8dd96b0b27796f1d5b0cdf1abd 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 18 29 3.3E-14 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DB34_02880 33651a8dd96b0b27796f1d5b0cdf1abd 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 2 18 3.3E-14 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DB34_02880 33651a8dd96b0b27796f1d5b0cdf1abd 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 29 48 3.3E-14 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DB34_02880 33651a8dd96b0b27796f1d5b0cdf1abd 150 Gene3D G3DSA:3.30.70.920 57 139 3.9E-24 T 11-10-2018 DB34_02880 33651a8dd96b0b27796f1d5b0cdf1abd 150 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 48 1.4E-15 T 11-10-2018 DB34_02880 33651a8dd96b0b27796f1d5b0cdf1abd 150 ProSitePatterns PS00519 AsnC-type HTH domain signature. 20 46 - T 11-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site DB34_02880 33651a8dd96b0b27796f1d5b0cdf1abd 150 Gene3D G3DSA:1.10.10.10 3 54 2.0E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB34_02880 33651a8dd96b0b27796f1d5b0cdf1abd 150 SUPERFAMILY SSF54909 65 145 1.61E-18 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel DB34_02880 33651a8dd96b0b27796f1d5b0cdf1abd 150 SMART SM00344 3 111 2.3E-31 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 DB34_02880 33651a8dd96b0b27796f1d5b0cdf1abd 150 SUPERFAMILY SSF46785 3 58 4.49E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB34_04300 6d886ff4a7d987c82acf68306502ff98 217 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 206 4.9E-47 T 11-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 DB34_04300 6d886ff4a7d987c82acf68306502ff98 217 Hamap MF_00238 Cytidylate kinase [cmk]. 6 212 28.792 T 11-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 DB34_04300 6d886ff4a7d987c82acf68306502ff98 217 Gene3D G3DSA:3.40.50.300 1 214 3.4E-57 T 11-10-2018 DB34_04300 6d886ff4a7d987c82acf68306502ff98 217 SUPERFAMILY SSF52540 5 212 7.2E-33 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_04300 6d886ff4a7d987c82acf68306502ff98 217 Pfam PF02224 Cytidylate kinase 8 209 1.2E-49 T 11-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 DB34_02605 020e6a5e49dc8fc43268fbfa72ca6445 484 SUPERFAMILY SSF53756 59 407 5.83E-40 T 11-10-2018 DB34_02605 020e6a5e49dc8fc43268fbfa72ca6445 484 Gene3D G3DSA:3.40.50.2000 177 399 2.0E-32 T 11-10-2018 DB34_02605 020e6a5e49dc8fc43268fbfa72ca6445 484 Pfam PF12000 Gkycosyl transferase family 4 group 26 191 5.3E-56 T 11-10-2018 IPR022623 Domain of unknown function DUF3495 DB34_02605 020e6a5e49dc8fc43268fbfa72ca6445 484 Gene3D G3DSA:3.40.50.2000 188 384 2.0E-32 T 11-10-2018 DB34_02605 020e6a5e49dc8fc43268fbfa72ca6445 484 Pfam PF00534 Glycosyl transferases group 1 212 382 2.2E-16 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 DB34_00425 325dd7e7195ce08c026d11999a6a5400 478 Gene3D G3DSA:3.90.640.10 285 352 9.3E-95 T 11-10-2018 DB34_00425 325dd7e7195ce08c026d11999a6a5400 478 Pfam PF02491 SHS2 domain inserted in FTSA 137 211 1.0E-17 T 11-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 DB34_00425 325dd7e7195ce08c026d11999a6a5400 478 SMART SM00842 60 246 1.6E-75 T 11-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 DB34_00425 325dd7e7195ce08c026d11999a6a5400 478 Hamap MF_02033 Cell division protein FtsA [ftsA]. 56 478 24.739 T 11-10-2018 IPR020823 Cell division protein FtsA DB34_00425 325dd7e7195ce08c026d11999a6a5400 478 SUPERFAMILY SSF53067 59 247 1.47E-43 T 11-10-2018 DB34_00425 325dd7e7195ce08c026d11999a6a5400 478 Pfam PF14450 Cell division protein FtsA 258 439 3.4E-21 T 11-10-2018 DB34_00425 325dd7e7195ce08c026d11999a6a5400 478 PIRSF PIRSF003101 51 478 7.8E-134 T 11-10-2018 IPR020823 Cell division protein FtsA DB34_00425 325dd7e7195ce08c026d11999a6a5400 478 Pfam PF14450 Cell division protein FtsA 61 235 6.0E-11 T 11-10-2018 DB34_00425 325dd7e7195ce08c026d11999a6a5400 478 Gene3D G3DSA:3.30.420.40 63 409 9.3E-95 T 11-10-2018 DB34_00425 325dd7e7195ce08c026d11999a6a5400 478 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 61 443 4.0E-92 T 11-10-2018 IPR020823 Cell division protein FtsA DB34_00425 325dd7e7195ce08c026d11999a6a5400 478 SUPERFAMILY SSF53067 250 413 3.24E-35 T 11-10-2018 DB34_00425 325dd7e7195ce08c026d11999a6a5400 478 Gene3D G3DSA:3.30.420.40 247 404 9.3E-95 T 11-10-2018 DB34_00425 325dd7e7195ce08c026d11999a6a5400 478 Gene3D G3DSA:3.30.1490.110 137 219 9.3E-95 T 11-10-2018 DB34_03565 ea323c7774714d5a7d6693365155c138 1027 SUPERFAMILY SSF52540 318 716 1.81E-28 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_03565 ea323c7774714d5a7d6693365155c138 1027 TIGRFAM TIGR02786 addB_alphas: double-strand break repair protein AddB 3 1019 5.7E-274 T 11-10-2018 IPR014153 Double-strand break repair protein AddB DB34_03565 ea323c7774714d5a7d6693365155c138 1027 Pfam PF12705 PD-(D/E)XK nuclease superfamily 745 993 1.2E-22 T 11-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type DB34_04710 65bccfb1300de550b26a3801fd3a0fe7 396 Gene3D G3DSA:1.10.287.470 96 169 2.6E-106 T 11-10-2018 DB34_04710 65bccfb1300de550b26a3801fd3a0fe7 396 Gene3D G3DSA:2.40.50.100 61 205 2.6E-106 T 11-10-2018 DB34_04710 65bccfb1300de550b26a3801fd3a0fe7 396 Gene3D G3DSA:2.40.30.170 49 301 2.6E-106 T 11-10-2018 DB34_04710 65bccfb1300de550b26a3801fd3a0fe7 396 Gene3D G3DSA:2.40.420.20 302 371 2.6E-106 T 11-10-2018 DB34_04710 65bccfb1300de550b26a3801fd3a0fe7 396 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 57 291 4.3E-10 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DB34_04710 65bccfb1300de550b26a3801fd3a0fe7 396 SUPERFAMILY SSF111369 50 298 2.48E-77 T 11-10-2018 DB34_04710 65bccfb1300de550b26a3801fd3a0fe7 396 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 37 372 5.0E-83 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 DB34_04710 65bccfb1300de550b26a3801fd3a0fe7 396 Pfam PF00529 HlyD membrane-fusion protein of T1SS 292 358 8.2E-9 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 DB34_00145 0a2a55a457c5f8cf459ef86d1f63498c 336 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 6 300 1.1E-31 T 11-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD DB34_00145 0a2a55a457c5f8cf459ef86d1f63498c 336 TIGRFAM TIGR03476 HpnL: putative membrane protein 1 316 4.1E-78 T 11-10-2018 DB34_03690 2abb49cceb1e6f5dc881a9c5d6abb42c 304 PRINTS PR00625 DnaJ domain signature 42 62 4.3E-23 T 11-10-2018 IPR001623 DnaJ domain DB34_03690 2abb49cceb1e6f5dc881a9c5d6abb42c 304 PRINTS PR00625 DnaJ domain signature 67 86 4.3E-23 T 11-10-2018 IPR001623 DnaJ domain DB34_03690 2abb49cceb1e6f5dc881a9c5d6abb42c 304 PRINTS PR00625 DnaJ domain signature 25 40 4.3E-23 T 11-10-2018 IPR001623 DnaJ domain DB34_03690 2abb49cceb1e6f5dc881a9c5d6abb42c 304 PRINTS PR00625 DnaJ domain signature 7 25 4.3E-23 T 11-10-2018 IPR001623 DnaJ domain DB34_03690 2abb49cceb1e6f5dc881a9c5d6abb42c 304 SUPERFAMILY SSF49493 133 218 1.11E-20 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 DB34_03690 2abb49cceb1e6f5dc881a9c5d6abb42c 304 Gene3D G3DSA:2.60.260.20 206 285 5.4E-22 T 11-10-2018 DB34_03690 2abb49cceb1e6f5dc881a9c5d6abb42c 304 SMART SM00271 4 62 8.6E-30 T 11-10-2018 IPR001623 DnaJ domain DB34_03690 2abb49cceb1e6f5dc881a9c5d6abb42c 304 Gene3D G3DSA:2.60.260.20 136 204 1.1E-19 T 11-10-2018 DB34_03690 2abb49cceb1e6f5dc881a9c5d6abb42c 304 Pfam PF01556 DnaJ C terminal domain 142 284 2.0E-32 T 11-10-2018 IPR002939 Chaperone DnaJ, C-terminal DB34_03690 2abb49cceb1e6f5dc881a9c5d6abb42c 304 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 11-10-2018 IPR018253 DnaJ domain, conserved site DB34_03690 2abb49cceb1e6f5dc881a9c5d6abb42c 304 Pfam PF00226 DnaJ domain 5 67 1.1E-25 T 11-10-2018 IPR001623 DnaJ domain DB34_03690 2abb49cceb1e6f5dc881a9c5d6abb42c 304 SUPERFAMILY SSF46565 1 106 4.32E-32 T 11-10-2018 IPR036869 Chaperone J-domain superfamily DB34_03690 2abb49cceb1e6f5dc881a9c5d6abb42c 304 SUPERFAMILY SSF49493 211 286 2.35E-17 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 DB34_03690 2abb49cceb1e6f5dc881a9c5d6abb42c 304 Gene3D G3DSA:1.10.287.110 2 135 8.7E-30 T 11-10-2018 IPR036869 Chaperone J-domain superfamily DB34_00230 c31265a6576b4768b0a79c19d28d1ffa 1302 Gene3D G3DSA:2.160.20.20 406 680 5.7E-40 T 11-10-2018 IPR012332 P22 tailspike-like, C-terminal domain superfamily DB34_00230 c31265a6576b4768b0a79c19d28d1ffa 1302 Gene3D G3DSA:2.160.20.20 220 405 1.5E-24 T 11-10-2018 IPR012332 P22 tailspike-like, C-terminal domain superfamily DB34_00230 c31265a6576b4768b0a79c19d28d1ffa 1302 Pfam PF13403 Hint domain 954 1093 4.7E-43 T 11-10-2018 IPR028992 Hedgehog/Intein (Hint) domain DB34_00230 c31265a6576b4768b0a79c19d28d1ffa 1302 TIGRFAM TIGR04415 O_hepto_targRPT: autotransporter passenger strand-loop-strand repeat 543 579 2.5E-8 T 11-10-2018 IPR030930 Adhesin of bacterial autotransporter system DB34_00230 c31265a6576b4768b0a79c19d28d1ffa 1302 TIGRFAM TIGR04415 O_hepto_targRPT: autotransporter passenger strand-loop-strand repeat 631 666 6.4E-5 T 11-10-2018 IPR030930 Adhesin of bacterial autotransporter system DB34_00230 c31265a6576b4768b0a79c19d28d1ffa 1302 TIGRFAM TIGR04415 O_hepto_targRPT: autotransporter passenger strand-loop-strand repeat 366 399 2.0E-8 T 11-10-2018 IPR030930 Adhesin of bacterial autotransporter system DB34_00230 c31265a6576b4768b0a79c19d28d1ffa 1302 TIGRFAM TIGR04415 O_hepto_targRPT: autotransporter passenger strand-loop-strand repeat 738 775 7.9E-7 T 11-10-2018 IPR030930 Adhesin of bacterial autotransporter system DB34_00230 c31265a6576b4768b0a79c19d28d1ffa 1302 TIGRFAM TIGR04415 O_hepto_targRPT: autotransporter passenger strand-loop-strand repeat 777 812 3.7E-5 T 11-10-2018 IPR030930 Adhesin of bacterial autotransporter system DB34_00230 c31265a6576b4768b0a79c19d28d1ffa 1302 TIGRFAM TIGR04415 O_hepto_targRPT: autotransporter passenger strand-loop-strand repeat 562 598 1.6E-7 T 11-10-2018 IPR030930 Adhesin of bacterial autotransporter system DB34_00230 c31265a6576b4768b0a79c19d28d1ffa 1302 SUPERFAMILY SSF51294 955 1090 3.66E-10 T 11-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 DB34_01795 0ba3a580132b3e3a170a00decdd40158 351 SUPERFAMILY SSF55961 138 343 6.04E-25 T 11-10-2018 DB34_01795 0ba3a580132b3e3a170a00decdd40158 351 SUPERFAMILY SSF50022 20 139 1.96E-33 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 DB34_01795 0ba3a580132b3e3a170a00decdd40158 351 Gene3D G3DSA:3.30.530.90 174 347 5.3E-7 T 11-10-2018 DB34_01795 0ba3a580132b3e3a170a00decdd40158 351 Gene3D G3DSA:2.102.10.10 28 158 1.6E-33 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 DB34_01795 0ba3a580132b3e3a170a00decdd40158 351 Pfam PF00355 Rieske [2Fe-2S] domain 32 111 1.5E-18 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 DB34_01795 0ba3a580132b3e3a170a00decdd40158 351 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 71 93 - T 11-10-2018 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0051537|GO:0055114 DB34_06070 c013b568c6cc3fb95cc962dd3108704c 747 SUPERFAMILY SSF55545 51 184 6.93E-22 T 11-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 DB34_06070 c013b568c6cc3fb95cc962dd3108704c 747 Gene3D G3DSA:3.30.379.10 28 181 4.4E-19 T 11-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 DB34_06070 c013b568c6cc3fb95cc962dd3108704c 747 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 49 181 7.3E-13 T 11-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal DB34_06070 c013b568c6cc3fb95cc962dd3108704c 747 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 185 525 9.0E-93 T 11-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 DB34_06070 c013b568c6cc3fb95cc962dd3108704c 747 PRINTS PR00738 Glycosyl hydrolase family 20 signature 208 229 2.3E-52 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 DB34_06070 c013b568c6cc3fb95cc962dd3108704c 747 PRINTS PR00738 Glycosyl hydrolase family 20 signature 307 325 2.3E-52 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 DB34_06070 c013b568c6cc3fb95cc962dd3108704c 747 PRINTS PR00738 Glycosyl hydrolase family 20 signature 144 164 2.3E-52 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 DB34_06070 c013b568c6cc3fb95cc962dd3108704c 747 PRINTS PR00738 Glycosyl hydrolase family 20 signature 179 196 2.3E-52 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 DB34_06070 c013b568c6cc3fb95cc962dd3108704c 747 PRINTS PR00738 Glycosyl hydrolase family 20 signature 490 506 2.3E-52 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 DB34_06070 c013b568c6cc3fb95cc962dd3108704c 747 PRINTS PR00738 Glycosyl hydrolase family 20 signature 329 342 2.3E-52 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 DB34_06070 c013b568c6cc3fb95cc962dd3108704c 747 PRINTS PR00738 Glycosyl hydrolase family 20 signature 260 277 2.3E-52 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 DB34_06070 c013b568c6cc3fb95cc962dd3108704c 747 PRINTS PR00738 Glycosyl hydrolase family 20 signature 507 524 2.3E-52 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 DB34_06070 c013b568c6cc3fb95cc962dd3108704c 747 SUPERFAMILY SSF51445 185 538 3.98E-103 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily DB34_06070 c013b568c6cc3fb95cc962dd3108704c 747 Gene3D G3DSA:3.20.20.80 183 553 8.3E-108 T 11-10-2018 DB34_02270 6a457f0b6c1abfd109bf2187aba1e054 100 Pfam PF00547 Urease, gamma subunit 1 99 7.1E-47 T 11-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DB34_02270 6a457f0b6c1abfd109bf2187aba1e054 100 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 33.873 T 11-10-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DB34_02270 6a457f0b6c1abfd109bf2187aba1e054 100 Gene3D G3DSA:3.30.280.10 1 100 3.4E-48 T 11-10-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DB34_02270 6a457f0b6c1abfd109bf2187aba1e054 100 PIRSF PIRSF001223 1 100 6.0E-50 T 11-10-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DB34_02270 6a457f0b6c1abfd109bf2187aba1e054 100 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 1 100 1.2E-47 T 11-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DB34_02270 6a457f0b6c1abfd109bf2187aba1e054 100 SUPERFAMILY SSF54111 1 100 2.22E-44 T 11-10-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DB34_02270 6a457f0b6c1abfd109bf2187aba1e054 100 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 9 99 5.0E-38 T 11-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DB34_10930 8411addf785ae2dbf57598b48d470b32 267 Pfam PF02571 Precorrin-6x reductase CbiJ/CobK 9 256 1.6E-73 T 11-10-2018 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 DB34_10930 8411addf785ae2dbf57598b48d470b32 267 TIGRFAM TIGR00715 precor6x_red: precorrin-6x reductase 9 258 5.7E-42 T 11-10-2018 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 DB34_08960 1ea1891f8d914bd1d82c5b5aaec7a668 403 PIRSF PIRSF003085 1 400 3.2E-130 T 11-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 DB34_08960 1ea1891f8d914bd1d82c5b5aaec7a668 403 Pfam PF02353 Mycolic acid cyclopropane synthetase 116 374 7.3E-88 T 11-10-2018 DB34_08960 1ea1891f8d914bd1d82c5b5aaec7a668 403 SUPERFAMILY SSF53335 124 385 2.76E-74 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB34_08960 1ea1891f8d914bd1d82c5b5aaec7a668 403 Gene3D G3DSA:3.40.50.150 122 389 9.4E-90 T 11-10-2018 DB34_08955 1393ed27475b11927887a62c9a1c4039 201 ProSitePatterns PS00651 Ribosomal protein L9 signature. 16 43 - T 11-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_08955 1393ed27475b11927887a62c9a1c4039 201 Pfam PF03948 Ribosomal protein L9, C-terminal domain 66 148 3.9E-23 T 11-10-2018 IPR020069 Ribosomal protein L9, C-terminal DB34_08955 1393ed27475b11927887a62c9a1c4039 201 Gene3D G3DSA:3.40.5.10 4 53 1.2E-20 T 11-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_08955 1393ed27475b11927887a62c9a1c4039 201 Pfam PF01281 Ribosomal protein L9, N-terminal domain 5 50 1.6E-20 T 11-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_08955 1393ed27475b11927887a62c9a1c4039 201 TIGRFAM TIGR00158 L9: ribosomal protein bL9 5 148 7.1E-40 T 11-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_08955 1393ed27475b11927887a62c9a1c4039 201 SUPERFAMILY SSF55653 60 150 1.57E-25 T 11-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily DB34_08955 1393ed27475b11927887a62c9a1c4039 201 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 4 150 24.756 T 11-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_08955 1393ed27475b11927887a62c9a1c4039 201 SUPERFAMILY SSF55658 5 60 2.79E-17 T 11-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal DB34_08955 1393ed27475b11927887a62c9a1c4039 201 Gene3D G3DSA:3.10.430.100 65 150 4.4E-23 T 11-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily DB34_13165 0f0ef8d75304eddf24831d74d001f256 214 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 125 205 1.2E-12 T 11-10-2018 IPR019289 Bacteriophage tail protein Gp41, putative DB34_13165 0f0ef8d75304eddf24831d74d001f256 214 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 26 106 3.6E-8 T 11-10-2018 IPR019289 Bacteriophage tail protein Gp41, putative DB34_04855 12b5f38e3a6636aa48e9c33ce16df7f2 432 SUPERFAMILY SSF51905 6 425 1.34E-34 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_04855 12b5f38e3a6636aa48e9c33ce16df7f2 432 Gene3D G3DSA:3.50.50.60 158 375 1.3E-5 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_04855 12b5f38e3a6636aa48e9c33ce16df7f2 432 Gene3D G3DSA:3.50.50.60 4 106 3.0E-11 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_04855 12b5f38e3a6636aa48e9c33ce16df7f2 432 Pfam PF01593 Flavin containing amine oxidoreductase 12 423 5.3E-25 T 11-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 DB34_04855 12b5f38e3a6636aa48e9c33ce16df7f2 432 TIGRFAM TIGR03467 HpnE: squalene-associated FAD-dependent desaturase 6 425 5.5E-120 T 11-10-2018 IPR017830 Hydroxysqualene dehydroxylase HpnE MetaCyc: PWY-7072 DB34_07600 2b3e5a8c3f48ef90cc1c735611a43ea4 463 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 454 5.1E-166 T 11-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 DB34_07600 2b3e5a8c3f48ef90cc1c735611a43ea4 463 SMART SM00382 89 244 9.8E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_07600 2b3e5a8c3f48ef90cc1c735611a43ea4 463 Hamap MF_01498 DNA repair protein RadA [radA]. 22 460 42.761 T 11-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 DB34_07600 2b3e5a8c3f48ef90cc1c735611a43ea4 463 Gene3D G3DSA:3.30.230.10 286 463 6.6E-13 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DB34_07600 2b3e5a8c3f48ef90cc1c735611a43ea4 463 SUPERFAMILY SSF52540 70 289 1.18E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_07600 2b3e5a8c3f48ef90cc1c735611a43ea4 463 Pfam PF13481 AAA domain 78 222 4.6E-15 T 11-10-2018 DB34_07600 2b3e5a8c3f48ef90cc1c735611a43ea4 463 PRINTS PR01874 DNA repair protein radA signature 11 35 1.8E-89 T 11-10-2018 DB34_07600 2b3e5a8c3f48ef90cc1c735611a43ea4 463 PRINTS PR01874 DNA repair protein radA signature 174 198 1.8E-89 T 11-10-2018 DB34_07600 2b3e5a8c3f48ef90cc1c735611a43ea4 463 PRINTS PR01874 DNA repair protein radA signature 81 109 1.8E-89 T 11-10-2018 DB34_07600 2b3e5a8c3f48ef90cc1c735611a43ea4 463 PRINTS PR01874 DNA repair protein radA signature 213 241 1.8E-89 T 11-10-2018 DB34_07600 2b3e5a8c3f48ef90cc1c735611a43ea4 463 PRINTS PR01874 DNA repair protein radA signature 123 140 1.8E-89 T 11-10-2018 DB34_07600 2b3e5a8c3f48ef90cc1c735611a43ea4 463 PRINTS PR01874 DNA repair protein radA signature 248 274 1.8E-89 T 11-10-2018 DB34_07600 2b3e5a8c3f48ef90cc1c735611a43ea4 463 PRINTS PR01874 DNA repair protein radA signature 323 346 1.8E-89 T 11-10-2018 DB34_07600 2b3e5a8c3f48ef90cc1c735611a43ea4 463 Pfam PF13541 Subunit ChlI of Mg-chelatase 347 429 3.1E-7 T 11-10-2018 DB34_07600 2b3e5a8c3f48ef90cc1c735611a43ea4 463 Gene3D G3DSA:3.40.50.300 68 282 1.1E-41 T 11-10-2018 DB34_07600 2b3e5a8c3f48ef90cc1c735611a43ea4 463 SUPERFAMILY SSF54211 255 457 1.82E-34 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DB34_02665 b84bbca700283f29d9b855d772b7c837 569 Pfam PF02470 MlaD protein 53 144 4.6E-10 T 11-10-2018 IPR003399 Mce/MlaD DB34_02665 b84bbca700283f29d9b855d772b7c837 569 Pfam PF02470 MlaD protein 315 407 7.3E-9 T 11-10-2018 IPR003399 Mce/MlaD DB34_07705 e644487e98872bcc397bdbf1ffcdedfd 188 SUPERFAMILY SSF89028 7 185 1.1E-52 T 11-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 DB34_07705 e644487e98872bcc397bdbf1ffcdedfd 188 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 14 184 1.0E-40 T 11-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 DB34_07705 e644487e98872bcc397bdbf1ffcdedfd 188 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 10 184 9.9E-51 T 11-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 DB34_07705 e644487e98872bcc397bdbf1ffcdedfd 188 Pfam PF01923 Cobalamin adenosyltransferase 8 173 1.5E-52 T 11-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 DB34_07705 e644487e98872bcc397bdbf1ffcdedfd 188 Gene3D G3DSA:1.20.1200.10 17 188 2.3E-52 T 11-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 DB34_11150 4379d57d71aedfc50925381c7f7ec76b 360 Pfam PF02541 Ppx/GppA phosphatase family 28 330 1.3E-48 T 11-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 DB34_11150 4379d57d71aedfc50925381c7f7ec76b 360 Gene3D G3DSA:3.30.420.40 8 131 3.1E-43 T 11-10-2018 DB34_11150 4379d57d71aedfc50925381c7f7ec76b 360 SUPERFAMILY SSF53067 14 134 1.04E-36 T 11-10-2018 DB34_11150 4379d57d71aedfc50925381c7f7ec76b 360 Gene3D G3DSA:3.30.420.150 142 334 7.1E-50 T 11-10-2018 DB34_11150 4379d57d71aedfc50925381c7f7ec76b 360 SUPERFAMILY SSF53067 143 331 1.23E-37 T 11-10-2018 DB34_11610 80e9e5938e673fff648bcf9c52d61d04 154 SUPERFAMILY SSF50249 4 154 8.91E-47 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB34_11610 80e9e5938e673fff648bcf9c52d61d04 154 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 154 3.9E-43 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 DB34_11610 80e9e5938e673fff648bcf9c52d61d04 154 Gene3D G3DSA:2.40.50.140 2 120 7.5E-45 T 11-10-2018 DB34_11610 80e9e5938e673fff648bcf9c52d61d04 154 Pfam PF00436 Single-strand binding protein family 5 105 9.0E-36 T 11-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 DB34_11610 80e9e5938e673fff648bcf9c52d61d04 154 PIRSF PIRSF002070 1 154 2.3E-35 T 11-10-2018 DB34_11610 80e9e5938e673fff648bcf9c52d61d04 154 Hamap MF_00984 Single-stranded DNA-binding protein. 5 118 32.365 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 DB34_11760 7351fd4631cf834eba6145842a8a58c0 347 Pfam PF00005 ABC transporter 31 188 7.3E-24 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB34_11760 7351fd4631cf834eba6145842a8a58c0 347 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 239 324 2.0E-22 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DB34_11760 7351fd4631cf834eba6145842a8a58c0 347 SMART SM00382 39 246 1.3E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_11760 7351fd4631cf834eba6145842a8a58c0 347 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 241 305 7.2E-18 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DB34_11760 7351fd4631cf834eba6145842a8a58c0 347 Gene3D G3DSA:3.40.50.300 8 334 1.7E-95 T 11-10-2018 DB34_11760 7351fd4631cf834eba6145842a8a58c0 347 SUPERFAMILY SSF52540 40 319 6.83E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_06460 07b03b0cb91e2842cf46e5f11847a50c 213 SMART SM00530 7 62 3.5E-15 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DB34_06460 07b03b0cb91e2842cf46e5f11847a50c 213 Pfam PF01381 Helix-turn-helix 8 62 1.3E-13 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DB34_06460 07b03b0cb91e2842cf46e5f11847a50c 213 SUPERFAMILY SSF51306 87 199 2.09E-8 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily DB34_06460 07b03b0cb91e2842cf46e5f11847a50c 213 Gene3D G3DSA:2.10.109.10 89 205 2.1E-5 T 11-10-2018 DB34_06460 07b03b0cb91e2842cf46e5f11847a50c 213 Gene3D G3DSA:1.10.260.40 2 65 2.8E-16 T 11-10-2018 DB34_06460 07b03b0cb91e2842cf46e5f11847a50c 213 SUPERFAMILY SSF47413 3 65 5.39E-14 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DB34_06760 1aaa02ca6cbefce72c58e703903f2e05 447 Gene3D G3DSA:3.80.30.20 169 371 1.8E-25 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe DB34_06760 1aaa02ca6cbefce72c58e703903f2e05 447 Pfam PF04055 Radical SAM superfamily 174 334 8.2E-16 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DB34_06760 1aaa02ca6cbefce72c58e703903f2e05 447 Pfam PF02310 B12 binding domain 31 124 2.9E-8 T 11-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 DB34_06760 1aaa02ca6cbefce72c58e703903f2e05 447 Gene3D G3DSA:3.40.50.280 26 144 2.0E-6 T 11-10-2018 DB34_06760 1aaa02ca6cbefce72c58e703903f2e05 447 SMART SM00729 169 377 4.8E-21 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DB34_06760 1aaa02ca6cbefce72c58e703903f2e05 447 SUPERFAMILY SSF102114 143 381 1.57E-34 T 11-10-2018 DB34_04130 b4b0f9004336d2c0955661bbaa76db56 463 SUPERFAMILY SSF53720 3 454 1.05E-137 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DB34_04130 b4b0f9004336d2c0955661bbaa76db56 463 Gene3D G3DSA:3.40.309.10 238 427 3.4E-145 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DB34_04130 b4b0f9004336d2c0955661bbaa76db56 463 Pfam PF00171 Aldehyde dehydrogenase family 3 453 1.8E-134 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DB34_04130 b4b0f9004336d2c0955661bbaa76db56 463 Gene3D G3DSA:3.40.605.10 3 452 3.4E-145 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DB34_06330 877fa8ee03c70b9d5962090c0a2e9287 1962 Gene3D G3DSA:1.10.530.10 867 1011 3.3E-20 T 11-10-2018 DB34_06330 877fa8ee03c70b9d5962090c0a2e9287 1962 Pfam PF06791 Prophage tail length tape measure protein 508 701 1.0E-13 T 11-10-2018 IPR009628 Bacteriophage lambda, GpH, tail tape measure, N-terminal DB34_06330 877fa8ee03c70b9d5962090c0a2e9287 1962 SUPERFAMILY SSF53955 868 993 1.03E-16 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily DB34_06330 877fa8ee03c70b9d5962090c0a2e9287 1962 Pfam PF01464 Transglycosylase SLT domain 884 979 3.1E-9 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 DB34_12505 598032530aa3cdbf882f2e229e8485cc 624 Gene3D G3DSA:1.25.40.10 174 340 2.4E-24 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB34_12505 598032530aa3cdbf882f2e229e8485cc 624 Gene3D G3DSA:1.25.40.10 72 173 5.4E-15 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB34_12505 598032530aa3cdbf882f2e229e8485cc 624 Gene3D G3DSA:1.25.40.10 2 71 2.1E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB34_12505 598032530aa3cdbf882f2e229e8485cc 624 Pfam PF13432 Tetratricopeptide repeat 10 65 0.0069 T 11-10-2018 DB34_12505 598032530aa3cdbf882f2e229e8485cc 624 Pfam PF13432 Tetratricopeptide repeat 281 336 8.0E-5 T 11-10-2018 DB34_12505 598032530aa3cdbf882f2e229e8485cc 624 Pfam PF13432 Tetratricopeptide repeat 211 271 0.0062 T 11-10-2018 DB34_12505 598032530aa3cdbf882f2e229e8485cc 624 Pfam PF13432 Tetratricopeptide repeat 110 167 0.001 T 11-10-2018 DB34_12505 598032530aa3cdbf882f2e229e8485cc 624 SUPERFAMILY SSF53756 362 592 1.91E-10 T 11-10-2018 DB34_12505 598032530aa3cdbf882f2e229e8485cc 624 SUPERFAMILY SSF48452 5 92 2.43E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB34_12505 598032530aa3cdbf882f2e229e8485cc 624 SMART SM00028 240 273 0.073 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB34_12505 598032530aa3cdbf882f2e229e8485cc 624 SMART SM00028 311 344 220.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB34_12505 598032530aa3cdbf882f2e229e8485cc 624 SMART SM00028 37 70 88.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB34_12505 598032530aa3cdbf882f2e229e8485cc 624 SMART SM00028 138 171 160.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB34_12505 598032530aa3cdbf882f2e229e8485cc 624 SMART SM00028 3 36 21.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB34_12505 598032530aa3cdbf882f2e229e8485cc 624 SMART SM00028 274 307 280.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB34_12505 598032530aa3cdbf882f2e229e8485cc 624 SMART SM00028 206 239 69.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB34_12505 598032530aa3cdbf882f2e229e8485cc 624 SMART SM00028 104 137 14.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB34_12505 598032530aa3cdbf882f2e229e8485cc 624 SUPERFAMILY SSF48452 74 338 6.57E-24 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB34_04765 7d69034e56836483a78a4e8cf5dde15a 461 SUPERFAMILY SSF53098 158 398 1.14E-5 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily DB34_04765 7d69034e56836483a78a4e8cf5dde15a 461 Pfam PF13701 Transposase DDE domain group 1 13 458 2.0E-164 T 11-10-2018 IPR025668 Transposase DDE domain DB34_02040 af468e1d806a12e8998f78db068d9a56 454 SUPERFAMILY SSF53955 63 205 1.25E-35 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily DB34_02040 af468e1d806a12e8998f78db068d9a56 454 Pfam PF05036 Sporulation related domain 376 448 5.7E-8 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 DB34_02040 af468e1d806a12e8998f78db068d9a56 454 Gene3D G3DSA:1.10.530.10 74 218 5.3E-35 T 11-10-2018 DB34_02040 af468e1d806a12e8998f78db068d9a56 454 Pfam PF01464 Transglycosylase SLT domain 81 192 3.7E-20 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 DB34_01540 2b87bc065bb63733c0acb2d3cd53ac97 469 SMART SM00345 23 82 7.1E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB34_01540 2b87bc065bb63733c0acb2d3cd53ac97 469 SUPERFAMILY SSF46785 13 86 3.29E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB34_01540 2b87bc065bb63733c0acb2d3cd53ac97 469 SUPERFAMILY SSF53383 105 461 1.9E-68 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB34_01540 2b87bc065bb63733c0acb2d3cd53ac97 469 Pfam PF00155 Aminotransferase class I and II 143 452 1.4E-31 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DB34_01540 2b87bc065bb63733c0acb2d3cd53ac97 469 Gene3D G3DSA:1.10.10.10 10 83 9.4E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB34_01540 2b87bc065bb63733c0acb2d3cd53ac97 469 Gene3D G3DSA:3.40.640.10 148 363 1.8E-68 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB34_01540 2b87bc065bb63733c0acb2d3cd53ac97 469 Gene3D G3DSA:3.90.1150.10 113 455 1.8E-68 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB34_01540 2b87bc065bb63733c0acb2d3cd53ac97 469 Pfam PF00392 Bacterial regulatory proteins, gntR family 22 82 1.4E-11 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB34_02250 0ed131bf53b590afbb612d1fc65d7222 232 Pfam PF01730 UreF 48 189 1.0E-25 T 11-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 DB34_02250 0ed131bf53b590afbb612d1fc65d7222 232 PIRSF PIRSF009467 14 232 2.2E-59 T 11-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 DB34_02250 0ed131bf53b590afbb612d1fc65d7222 232 Hamap MF_01385 Urease accessory protein UreF [ureF]. 16 232 27.581 T 11-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 DB34_02250 0ed131bf53b590afbb612d1fc65d7222 232 Gene3D G3DSA:1.10.4190.10 11 209 1.6E-44 T 11-10-2018 IPR038277 UreF domain superfamily DB34_10645 f124b43328710fe0ae94a0cdab95008f 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 2.8E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB34_10645 f124b43328710fe0ae94a0cdab95008f 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 2.8E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB34_10645 f124b43328710fe0ae94a0cdab95008f 193 SUPERFAMILY SSF46689 6 80 6.31E-14 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB34_10645 f124b43328710fe0ae94a0cdab95008f 193 Gene3D G3DSA:1.10.357.10 12 192 6.6E-34 T 11-10-2018 DB34_10645 f124b43328710fe0ae94a0cdab95008f 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 62 1.2E-12 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB34_08600 d71aa403009d1379ba40fb0609804e44 124 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 124 9.0E-49 T 11-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_08600 d71aa403009d1379ba40fb0609804e44 124 SUPERFAMILY SSF54736 53 124 3.49E-26 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like DB34_08600 d71aa403009d1379ba40fb0609804e44 124 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 1 124 24.853 T 11-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_08600 d71aa403009d1379ba40fb0609804e44 124 Gene3D G3DSA:3.30.1390.10 54 124 4.8E-33 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like DB34_08600 d71aa403009d1379ba40fb0609804e44 124 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 60 124 1.0E-24 T 11-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_08600 d71aa403009d1379ba40fb0609804e44 124 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 58 124 5.6E-32 T 11-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_08600 d71aa403009d1379ba40fb0609804e44 124 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 50 1.6E-18 T 11-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_08600 d71aa403009d1379ba40fb0609804e44 124 Gene3D G3DSA:1.20.5.710 3 53 8.0E-18 T 11-10-2018 DB34_08600 d71aa403009d1379ba40fb0609804e44 124 SUPERFAMILY SSF48300 4 60 7.85E-16 T 11-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_04705 373ef6f29bef9e9d005fde583dcba104 450 PIRSF PIRSF006060 1 447 1.2E-67 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DB34_04705 373ef6f29bef9e9d005fde583dcba104 450 Pfam PF13520 Amino acid permease 12 420 1.7E-36 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DB34_04705 373ef6f29bef9e9d005fde583dcba104 450 Gene3D G3DSA:1.20.1740.10 7 449 2.5E-56 T 11-10-2018 DB34_04705 373ef6f29bef9e9d005fde583dcba104 450 TIGRFAM TIGR00908 2A0305: ethanolamine permease 7 444 4.4E-178 T 11-10-2018 IPR004757 Ethanolamine permease DB34_00770 354263c62125e2c05bdf90552f9999cf 409 Pfam PF13439 Glycosyltransferase Family 4 20 176 5.2E-27 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 DB34_00770 354263c62125e2c05bdf90552f9999cf 409 Gene3D G3DSA:3.40.50.2000 10 188 1.6E-23 T 11-10-2018 DB34_00770 354263c62125e2c05bdf90552f9999cf 409 Pfam PF00534 Glycosyl transferases group 1 195 361 2.0E-30 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 DB34_00770 354263c62125e2c05bdf90552f9999cf 409 Gene3D G3DSA:3.40.50.2000 189 368 9.5E-37 T 11-10-2018 DB34_00770 354263c62125e2c05bdf90552f9999cf 409 SUPERFAMILY SSF53756 11 385 6.57E-79 T 11-10-2018 DB34_07395 3c605ba227f28af450f31675b9ab8cbe 368 Pfam PF02163 Peptidase family M50 11 344 1.1E-76 T 11-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 DB34_07395 3c605ba227f28af450f31675b9ab8cbe 368 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 5 192 4.8E-45 T 11-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 DB34_07395 3c605ba227f28af450f31675b9ab8cbe 368 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 131 356 1.9E-49 T 11-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 DB34_07395 3c605ba227f28af450f31675b9ab8cbe 368 SUPERFAMILY SSF50156 95 202 1.58E-16 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 DB34_07395 3c605ba227f28af450f31675b9ab8cbe 368 Pfam PF13180 PDZ domain 138 200 6.1E-8 T 11-10-2018 IPR001478 PDZ domain GO:0005515 DB34_07395 3c605ba227f28af450f31675b9ab8cbe 368 Gene3D G3DSA:2.30.42.10 134 223 8.1E-15 T 11-10-2018 DB34_07395 3c605ba227f28af450f31675b9ab8cbe 368 SMART SM00228 122 192 3.5E-4 T 11-10-2018 IPR001478 PDZ domain GO:0005515 DB34_06170 9de0029a93a2d4323833290ed7ff7446 169 SUPERFAMILY SSF46626 7 133 3.75E-7 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DB34_06170 9de0029a93a2d4323833290ed7ff7446 169 Gene3D G3DSA:1.10.760.10 88 152 9.0E-6 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DB34_07370 4c2472a3a3b189261ab22a3e220cfb22 245 PIRSF PIRSF005650 7 245 1.2E-92 T 11-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 DB34_07370 4c2472a3a3b189261ab22a3e220cfb22 245 Gene3D G3DSA:3.40.1160.10 5 244 2.3E-75 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DB34_07370 4c2472a3a3b189261ab22a3e220cfb22 245 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 12 241 2.4E-99 T 11-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 DB34_07370 4c2472a3a3b189261ab22a3e220cfb22 245 Hamap MF_01220_B Uridylate kinase [pyrH]. 9 242 43.34 T 11-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 DB34_07370 4c2472a3a3b189261ab22a3e220cfb22 245 Pfam PF00696 Amino acid kinase family 12 221 2.7E-30 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 DB34_07370 4c2472a3a3b189261ab22a3e220cfb22 245 SUPERFAMILY SSF53633 10 242 9.16E-69 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DB34_04035 4d208a8822508710534807705ba0a784 319 Pfam PF14559 Tetratricopeptide repeat 157 223 6.1E-10 T 11-10-2018 DB34_04035 4d208a8822508710534807705ba0a784 319 Pfam PF14561 Tetratricopeptide repeat 231 318 1.1E-30 T 11-10-2018 DB34_04035 4d208a8822508710534807705ba0a784 319 Gene3D G3DSA:1.25.40.10 232 318 8.1E-26 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB34_04035 4d208a8822508710534807705ba0a784 319 ProSitePatterns PS00194 Thioredoxin family active site. 48 66 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 DB34_04035 4d208a8822508710534807705ba0a784 319 SUPERFAMILY SSF48452 153 305 7.59E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB34_04035 4d208a8822508710534807705ba0a784 319 Gene3D G3DSA:3.40.30.10 25 138 3.8E-23 T 11-10-2018 DB34_04035 4d208a8822508710534807705ba0a784 319 Gene3D G3DSA:1.25.40.10 144 229 1.1E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB34_04035 4d208a8822508710534807705ba0a784 319 SUPERFAMILY SSF52833 21 139 5.8E-28 T 11-10-2018 IPR036249 Thioredoxin-like superfamily DB34_04035 4d208a8822508710534807705ba0a784 319 Pfam PF00085 Thioredoxin 30 133 5.9E-20 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 DB34_09870 ef3789f715a89b617c1ebd4127e6e425 171 Pfam PF02698 DUF218 domain 6 137 2.2E-17 T 11-10-2018 IPR003848 Domain of unknown function DUF218 DB34_13575 fe42e49d9ee0b36f321f7cc2172a2bbf 180 Gene3D G3DSA:1.10.150.130 11 138 1.9E-9 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal DB34_13575 fe42e49d9ee0b36f321f7cc2172a2bbf 180 SUPERFAMILY SSF56349 28 157 1.44E-16 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DB34_01665 c9d9ee78b192ef117d856367877f3eb3 404 SUPERFAMILY SSF63380 152 255 4.49E-29 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel DB34_01665 c9d9ee78b192ef117d856367877f3eb3 404 Pfam PF00970 Oxidoreductase FAD-binding domain 159 255 4.4E-10 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 DB34_01665 c9d9ee78b192ef117d856367877f3eb3 404 SUPERFAMILY SSF52343 260 395 7.07E-29 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DB34_01665 c9d9ee78b192ef117d856367877f3eb3 404 Pfam PF00175 Oxidoreductase NAD-binding domain 267 374 2.6E-10 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 DB34_01665 c9d9ee78b192ef117d856367877f3eb3 404 Gene3D G3DSA:1.10.490.10 5 146 1.1E-50 T 11-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 DB34_01665 c9d9ee78b192ef117d856367877f3eb3 404 Gene3D G3DSA:3.40.50.80 257 400 6.4E-29 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DB34_01665 c9d9ee78b192ef117d856367877f3eb3 404 Gene3D G3DSA:2.40.30.10 153 256 6.5E-35 T 11-10-2018 DB34_01665 c9d9ee78b192ef117d856367877f3eb3 404 Pfam PF00042 Globin 11 105 3.9E-6 T 11-10-2018 IPR000971 Globin GO:0020037 DB34_01665 c9d9ee78b192ef117d856367877f3eb3 404 SUPERFAMILY SSF46458 5 144 4.66E-36 T 11-10-2018 IPR009050 Globin-like superfamily DB34_09330 b5e889938efb23acf147430527a9992f 109 SUPERFAMILY SSF48600 11 98 7.78E-26 T 11-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 DB34_09330 b5e889938efb23acf147430527a9992f 109 TIGRFAM TIGR01795 CM_mono_cladeE: chorismate mutase 14 102 1.5E-43 T 11-10-2018 IPR010951 Chorismate mutase, bacteria DB34_09330 b5e889938efb23acf147430527a9992f 109 Gene3D G3DSA:1.20.59.10 6 108 1.7E-41 T 11-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 DB34_09330 b5e889938efb23acf147430527a9992f 109 SMART SM00830 19 99 2.0E-24 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 DB34_09330 b5e889938efb23acf147430527a9992f 109 Pfam PF01817 Chorismate mutase type II 19 94 9.5E-18 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 DB34_10940 a3483b500537d3632c16075578689976 241 SUPERFAMILY SSF53790 2 238 6.54E-46 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 DB34_10940 a3483b500537d3632c16075578689976 241 PIRSF PIRSF036427 2 240 1.7E-67 T 11-10-2018 IPR012382 Precorrin-2 C(20)-methyltransferase GO:0008757|GO:0009236|GO:0030788 DB34_10940 a3483b500537d3632c16075578689976 241 Gene3D G3DSA:3.30.950.10 137 238 3.7E-16 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 DB34_10940 a3483b500537d3632c16075578689976 241 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 6 216 5.0E-48 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 DB34_10940 a3483b500537d3632c16075578689976 241 TIGRFAM TIGR01467 cobI_cbiL: precorrin-2 C(20)-methyltransferase 4 234 1.5E-65 T 11-10-2018 IPR006364 Precorrin-2 C(20)-methyltransferase domain GO:0008757|GO:0009236 DB34_10940 a3483b500537d3632c16075578689976 241 Gene3D G3DSA:3.40.1010.10 2 135 1.3E-31 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 DB34_05900 782c247aa58ac566ba0ee4c5d2d8f88e 474 Pfam PF04055 Radical SAM superfamily 202 361 4.6E-22 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DB34_05900 782c247aa58ac566ba0ee4c5d2d8f88e 474 TIGRFAM TIGR03471 HpnJ: hopanoid biosynthesis associated radical SAM protein HpnJ 1 471 1.1E-248 T 11-10-2018 IPR017834 Hopanoid biosynthesis associated radical SAM protein HpnJ DB34_05900 782c247aa58ac566ba0ee4c5d2d8f88e 474 Gene3D G3DSA:3.80.30.20 195 401 1.7E-27 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe DB34_05900 782c247aa58ac566ba0ee4c5d2d8f88e 474 SUPERFAMILY SSF102114 168 392 2.22E-48 T 11-10-2018 DB34_05900 782c247aa58ac566ba0ee4c5d2d8f88e 474 SMART SM00729 196 402 5.8E-37 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DB34_08370 cbf865b43fb9132a9984c2c805ed71ec 496 Gene3D G3DSA:1.10.3210.10 301 493 8.6E-48 T 11-10-2018 DB34_08370 cbf865b43fb9132a9984c2c805ed71ec 496 Gene3D G3DSA:3.30.420.150 114 298 9.6E-46 T 11-10-2018 DB34_08370 cbf865b43fb9132a9984c2c805ed71ec 496 SUPERFAMILY SSF53067 8 130 4.01E-30 T 11-10-2018 DB34_08370 cbf865b43fb9132a9984c2c805ed71ec 496 Gene3D G3DSA:3.30.420.40 2 113 1.9E-32 T 11-10-2018 DB34_08370 cbf865b43fb9132a9984c2c805ed71ec 496 Pfam PF02541 Ppx/GppA phosphatase family 24 295 5.8E-35 T 11-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 DB34_08370 cbf865b43fb9132a9984c2c805ed71ec 496 SUPERFAMILY SSF109604 339 463 6.59E-10 T 11-10-2018 DB34_08370 cbf865b43fb9132a9984c2c805ed71ec 496 SUPERFAMILY SSF53067 133 297 1.29E-29 T 11-10-2018 DB34_12885 c9b89cb164623b7bf04f200a725d9a24 754 SUPERFAMILY SSF47384 511 587 3.92E-11 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DB34_12885 c9b89cb164623b7bf04f200a725d9a24 754 Gene3D G3DSA:1.10.287.130 509 586 1.4E-11 T 11-10-2018 DB34_12885 c9b89cb164623b7bf04f200a725d9a24 754 PRINTS PR00344 Bacterial sensor protein C-terminal signature 709 727 1.6E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB34_12885 c9b89cb164623b7bf04f200a725d9a24 754 PRINTS PR00344 Bacterial sensor protein C-terminal signature 680 694 1.6E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB34_12885 c9b89cb164623b7bf04f200a725d9a24 754 Pfam PF00672 HAMP domain 336 383 4.0E-12 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DB34_12885 c9b89cb164623b7bf04f200a725d9a24 754 SMART SM00388 518 589 1.4E-10 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DB34_12885 c9b89cb164623b7bf04f200a725d9a24 754 SMART SM00387 629 750 2.7E-23 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB34_12885 c9b89cb164623b7bf04f200a725d9a24 754 SUPERFAMILY SSF55785 388 508 8.37E-6 T 11-10-2018 IPR035965 PAS domain superfamily DB34_12885 c9b89cb164623b7bf04f200a725d9a24 754 SUPERFAMILY SSF55874 588 746 9.04E-30 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB34_12885 c9b89cb164623b7bf04f200a725d9a24 754 PIRSF PIRSF037532 12 753 1.1E-239 T 11-10-2018 IPR017232 Signal transduction histidine kinase, nitrogen fixation and metabolism regulator DB34_12885 c9b89cb164623b7bf04f200a725d9a24 754 Gene3D G3DSA:3.30.565.10 592 753 5.1E-33 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB34_12885 c9b89cb164623b7bf04f200a725d9a24 754 Pfam PF00512 His Kinase A (phospho-acceptor) domain 521 586 7.6E-9 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DB34_12885 c9b89cb164623b7bf04f200a725d9a24 754 SMART SM00304 335 388 8.1E-12 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DB34_12885 c9b89cb164623b7bf04f200a725d9a24 754 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 630 747 2.7E-18 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB34_12885 c9b89cb164623b7bf04f200a725d9a24 754 SUPERFAMILY SSF158472 337 385 3.53E-10 T 11-10-2018 DB34_12885 c9b89cb164623b7bf04f200a725d9a24 754 Gene3D G3DSA:3.30.450.20 392 508 2.1E-8 T 11-10-2018 DB34_12885 c9b89cb164623b7bf04f200a725d9a24 754 Gene3D G3DSA:1.20.1480.50 297 391 2.8E-15 T 11-10-2018 DB34_11770 aeca86fb2b7bedddcc8c22b3b1dd1d03 364 Gene3D G3DSA:3.20.20.70 4 352 8.7E-103 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB34_11770 aeca86fb2b7bedddcc8c22b3b1dd1d03 364 Pfam PF03060 Nitronate monooxygenase 8 336 6.9E-77 T 11-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 DB34_11770 aeca86fb2b7bedddcc8c22b3b1dd1d03 364 SUPERFAMILY SSF51412 5 329 1.51E-58 T 11-10-2018 DB34_00750 6db044f02fc02810a4343ab2f1d4a532 178 ProSitePatterns PS00938 Initiation factor 3 signature. 68 81 - T 11-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 DB34_00750 6db044f02fc02810a4343ab2f1d4a532 178 Gene3D G3DSA:3.10.20.80 13 85 2.5E-32 T 11-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 DB34_00750 6db044f02fc02810a4343ab2f1d4a532 178 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 10 178 28.893 T 11-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 DB34_00750 6db044f02fc02810a4343ab2f1d4a532 178 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 17 86 1.2E-30 T 11-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 DB34_00750 6db044f02fc02810a4343ab2f1d4a532 178 Gene3D G3DSA:3.30.110.10 86 178 4.5E-37 T 11-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 DB34_00750 6db044f02fc02810a4343ab2f1d4a532 178 SUPERFAMILY SSF54364 14 88 6.67E-29 T 11-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 DB34_00750 6db044f02fc02810a4343ab2f1d4a532 178 SUPERFAMILY SSF55200 92 177 1.83E-32 T 11-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 DB34_00750 6db044f02fc02810a4343ab2f1d4a532 178 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 17 178 6.9E-66 T 11-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 DB34_00750 6db044f02fc02810a4343ab2f1d4a532 178 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 93 177 4.5E-37 T 11-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 DB34_10845 455a5d4a4884342ac0a4192fb5f308f3 503 SUPERFAMILY SSF100950 230 501 2.43E-77 T 11-10-2018 IPR037171 NagB/RpiA transferase-like DB34_10845 455a5d4a4884342ac0a4192fb5f308f3 503 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 334 468 4.8E-37 T 11-10-2018 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain DB34_10845 455a5d4a4884342ac0a4192fb5f308f3 503 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 12 187 7.8E-25 T 11-10-2018 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 DB34_10845 455a5d4a4884342ac0a4192fb5f308f3 503 Gene3D G3DSA:3.40.1080.20 342 484 8.5E-36 T 11-10-2018 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily DB34_10845 455a5d4a4884342ac0a4192fb5f308f3 503 Gene3D G3DSA:3.30.750.70 229 317 2.4E-5 T 11-10-2018 DB34_10845 455a5d4a4884342ac0a4192fb5f308f3 503 SUPERFAMILY SSF100950 2 227 7.33E-64 T 11-10-2018 IPR037171 NagB/RpiA transferase-like DB34_10845 455a5d4a4884342ac0a4192fb5f308f3 503 TIGRFAM TIGR03458 YgfH_subfam: succinate CoA transferase 12 501 4.0E-224 T 11-10-2018 IPR017821 Succinate CoA transferase GO:0006084|GO:0016740 DB34_10845 455a5d4a4884342ac0a4192fb5f308f3 503 Gene3D G3DSA:3.40.1080.10 12 181 1.7E-15 T 11-10-2018 DB34_03860 a301caf9f9758f470fbc6a3aee430a62 154 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 69 147 1.0E-29 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 DB34_03860 a301caf9f9758f470fbc6a3aee430a62 154 SUPERFAMILY SSF46767 67 147 3.4E-26 T 11-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 DB34_03860 a301caf9f9758f470fbc6a3aee430a62 154 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 5 147 34.727 T 11-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 DB34_03860 a301caf9f9758f470fbc6a3aee430a62 154 Gene3D G3DSA:1.10.10.10 67 153 7.9E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB34_03860 a301caf9f9758f470fbc6a3aee430a62 154 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 116 122 - T 11-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 DB34_03860 a301caf9f9758f470fbc6a3aee430a62 154 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 68 146 4.7E-28 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 DB34_03860 a301caf9f9758f470fbc6a3aee430a62 154 SUPERFAMILY SSF53155 4 73 2.71E-9 T 11-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 DB34_07855 cc613c1662f2afb2c93bd656c556e90c 308 SUPERFAMILY SSF103481 197 291 4.05E-10 T 11-10-2018 DB34_07855 cc613c1662f2afb2c93bd656c556e90c 308 SUPERFAMILY SSF103481 58 145 3.27E-6 T 11-10-2018 DB34_07855 cc613c1662f2afb2c93bd656c556e90c 308 Pfam PF00892 EamA-like transporter family 154 287 3.4E-17 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DB34_08815 423180b282a4d0058ec28706861fcd5d 101 Gene3D G3DSA:1.10.1470.10 2 69 1.9E-6 T 11-10-2018 IPR036629 YjbJ superfamily DB34_08815 423180b282a4d0058ec28706861fcd5d 101 SUPERFAMILY SSF69047 11 67 1.09E-10 T 11-10-2018 IPR036629 YjbJ superfamily DB34_08815 423180b282a4d0058ec28706861fcd5d 101 Pfam PF05532 CsbD-like 12 62 3.0E-15 T 11-10-2018 IPR008462 CsbD-like domain DB34_10640 a6420ad7f2e11540e0be9bc668ff1f9a 109 Gene3D G3DSA:1.10.3730.20 1 107 6.0E-28 T 11-10-2018 DB34_10640 a6420ad7f2e11540e0be9bc668ff1f9a 109 SUPERFAMILY SSF103481 6 104 1.23E-19 T 11-10-2018 DB34_10640 a6420ad7f2e11540e0be9bc668ff1f9a 109 Pfam PF00893 Small Multidrug Resistance protein 4 94 4.3E-20 T 11-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 DB34_03420 2038459beb700fc7473fe0b8603a8415 363 Gene3D G3DSA:3.40.50.2000 184 343 2.5E-36 T 11-10-2018 DB34_03420 2038459beb700fc7473fe0b8603a8415 363 Gene3D G3DSA:3.40.50.2000 6 166 3.3E-6 T 11-10-2018 DB34_03420 2038459beb700fc7473fe0b8603a8415 363 SUPERFAMILY SSF53756 7 359 3.77E-58 T 11-10-2018 DB34_03420 2038459beb700fc7473fe0b8603a8415 363 Pfam PF13439 Glycosyltransferase Family 4 17 164 3.5E-7 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 DB34_03420 2038459beb700fc7473fe0b8603a8415 363 Pfam PF00534 Glycosyl transferases group 1 182 337 3.7E-29 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 DB34_06980 af83ce63f882fc23f93d45b4be294431 127 SUPERFAMILY SSF54593 2 126 1.22E-18 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DB34_06980 af83ce63f882fc23f93d45b4be294431 127 Gene3D G3DSA:3.10.180.10 1 125 2.2E-28 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DB34_06980 af83ce63f882fc23f93d45b4be294431 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 121 1.5E-4 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DB34_08260 25d3ead33f3669e67dc34f989b2caa09 363 SUPERFAMILY SSF51395 1 347 2.49E-106 T 11-10-2018 DB34_08260 25d3ead33f3669e67dc34f989b2caa09 363 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 339 3.3E-62 T 11-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 DB34_08260 25d3ead33f3669e67dc34f989b2caa09 363 Gene3D G3DSA:3.20.20.70 1 363 6.3E-118 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB34_02805 2343949f991ac2934cb9c742222ffd20 327 Gene3D G3DSA:3.40.50.720 127 271 3.1E-110 T 11-10-2018 DB34_02805 2343949f991ac2934cb9c742222ffd20 327 SUPERFAMILY SSF50129 11 145 3.96E-38 T 11-10-2018 IPR011032 GroES-like superfamily DB34_02805 2343949f991ac2934cb9c742222ffd20 327 Gene3D G3DSA:3.90.180.10 17 321 3.1E-110 T 11-10-2018 DB34_02805 2343949f991ac2934cb9c742222ffd20 327 SMART SM00829 15 325 1.7E-16 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 DB34_02805 2343949f991ac2934cb9c742222ffd20 327 SUPERFAMILY SSF51735 116 277 1.11E-38 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily DB34_02805 2343949f991ac2934cb9c742222ffd20 327 Pfam PF00107 Zinc-binding dehydrogenase 155 259 1.0E-23 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DB34_02805 2343949f991ac2934cb9c742222ffd20 327 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 33 92 1.9E-8 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DB34_02545 4ed2a6b7162a1ff006bd41f737517e97 163 SUPERFAMILY SSF50891 6 154 9.5E-51 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily DB34_02545 4ed2a6b7162a1ff006bd41f737517e97 163 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 11 155 8.9E-47 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 DB34_02545 4ed2a6b7162a1ff006bd41f737517e97 163 Gene3D G3DSA:2.40.100.10 1 154 1.2E-48 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily DB34_02545 4ed2a6b7162a1ff006bd41f737517e97 163 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 44 61 - T 11-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 DB34_02545 4ed2a6b7162a1ff006bd41f737517e97 163 PIRSF PIRSF001467 3 158 5.1E-32 T 11-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 DB34_02545 4ed2a6b7162a1ff006bd41f737517e97 163 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 2.0E-16 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 DB34_02545 4ed2a6b7162a1ff006bd41f737517e97 163 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 23 38 2.0E-16 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 DB34_02545 4ed2a6b7162a1ff006bd41f737517e97 163 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 105 117 2.0E-16 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 DB34_02545 4ed2a6b7162a1ff006bd41f737517e97 163 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 49 61 2.0E-16 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 DB34_11920 3ea6303f104eccb5a19a77496af17a53 563 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 6 539 6.1E-129 T 11-10-2018 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0016021|GO:0034775|GO:0042626|GO:0045454 DB34_11920 3ea6303f104eccb5a19a77496af17a53 563 SUPERFAMILY SSF90123 7 328 1.83E-33 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DB34_11920 3ea6303f104eccb5a19a77496af17a53 563 SUPERFAMILY SSF52540 337 561 2.99E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_11920 3ea6303f104eccb5a19a77496af17a53 563 SMART SM00382 368 555 7.4E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_11920 3ea6303f104eccb5a19a77496af17a53 563 Gene3D G3DSA:1.20.1560.10 4 324 1.1E-21 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DB34_11920 3ea6303f104eccb5a19a77496af17a53 563 Gene3D G3DSA:3.40.50.300 338 562 1.3E-66 T 11-10-2018 DB34_11920 3ea6303f104eccb5a19a77496af17a53 563 Pfam PF00005 ABC transporter 360 507 4.6E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB34_11920 3ea6303f104eccb5a19a77496af17a53 563 ProSitePatterns PS00211 ABC transporters family signature. 480 494 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB34_05275 1fa096027b68339baee0ced819043cc9 167 Pfam PF11948 Protein of unknown function (DUF3465) 39 167 8.7E-32 T 11-10-2018 IPR021856 Protein of unknown function DUF3465 DB34_05215 338ca7f653bf9ff3e0f2373284716306 304 PIRSF PIRSF038992 20 302 8.5E-60 T 11-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 DB34_05215 338ca7f653bf9ff3e0f2373284716306 304 Pfam PF01791 DeoC/LacD family aldolase 41 286 3.4E-31 T 11-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 DB34_05215 338ca7f653bf9ff3e0f2373284716306 304 SUPERFAMILY SSF51569 20 301 9.03E-64 T 11-10-2018 DB34_05215 338ca7f653bf9ff3e0f2373284716306 304 Gene3D G3DSA:3.20.20.70 22 304 3.0E-80 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB34_05215 338ca7f653bf9ff3e0f2373284716306 304 SMART SM01133 40 286 5.5E-46 T 11-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 DB34_02295 d7297f3c32c2d5a4587e5b02bd121d25 654 SUPERFAMILY SSF53474 342 620 1.14E-15 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold DB34_06750 577d7d61dfb47be3640e2fe896ddfbe5 191 SUPERFAMILY SSF53041 13 135 1.83E-9 T 11-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 DB34_06750 577d7d61dfb47be3640e2fe896ddfbe5 191 Gene3D G3DSA:3.40.50.1390 3 125 3.2E-9 T 11-10-2018 DB34_06750 577d7d61dfb47be3640e2fe896ddfbe5 191 Gene3D G3DSA:1.10.10.60 140 182 4.8E-6 T 11-10-2018 DB34_06750 577d7d61dfb47be3640e2fe896ddfbe5 191 Pfam PF00239 Resolvase, N terminal domain 49 134 4.9E-8 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 DB34_06750 577d7d61dfb47be3640e2fe896ddfbe5 191 SUPERFAMILY SSF46689 138 180 8.96E-7 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB34_09745 e300b4ea54334fa4f8e6b1f4c0877436 356 Hamap MF_00300 Chorismate synthase [aroC]. 10 356 36.566 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 DB34_09745 e300b4ea54334fa4f8e6b1f4c0877436 356 ProSitePatterns PS00789 Chorismate synthase signature 3. 323 339 - T 11-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 DB34_09745 e300b4ea54334fa4f8e6b1f4c0877436 356 Pfam PF01264 Chorismate synthase 10 349 5.5E-139 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 DB34_09745 e300b4ea54334fa4f8e6b1f4c0877436 356 Gene3D G3DSA:3.60.150.10 1 356 2.6E-148 T 11-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 DB34_09745 e300b4ea54334fa4f8e6b1f4c0877436 356 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 11-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 DB34_09745 e300b4ea54334fa4f8e6b1f4c0877436 356 PIRSF PIRSF001456 3 355 4.0E-140 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 DB34_09745 e300b4ea54334fa4f8e6b1f4c0877436 356 TIGRFAM TIGR00033 aroC: chorismate synthase 10 354 6.3E-137 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 DB34_09745 e300b4ea54334fa4f8e6b1f4c0877436 356 SUPERFAMILY SSF103263 4 353 4.97E-145 T 11-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 DB34_09745 e300b4ea54334fa4f8e6b1f4c0877436 356 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 11-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 DB34_03465 eb1a8b865a8bec5b4c1091ad8bcba0fd 302 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 11 295 3.5E-89 T 11-10-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 DB34_03465 eb1a8b865a8bec5b4c1091ad8bcba0fd 302 Gene3D G3DSA:3.90.25.10 164 290 1.0E-98 T 11-10-2018 DB34_03465 eb1a8b865a8bec5b4c1091ad8bcba0fd 302 SUPERFAMILY SSF51735 11 296 7.15E-90 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily DB34_03465 eb1a8b865a8bec5b4c1091ad8bcba0fd 302 Gene3D G3DSA:3.40.50.720 11 283 1.0E-98 T 11-10-2018 DB34_03465 eb1a8b865a8bec5b4c1091ad8bcba0fd 302 Pfam PF04321 RmlD substrate binding domain 11 295 1.8E-96 T 11-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 DB34_01810 f8b094ccd66bc0e3d41dbc0c155a9974 154 Gene3D G3DSA:2.40.128.520 34 150 1.5E-12 T 11-10-2018 DB34_01810 f8b094ccd66bc0e3d41dbc0c155a9974 154 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 36 140 5.4E-23 T 11-10-2018 IPR019223 Domain of unknown function DUF2147 DB34_10565 37c0f73116232459d8b7d5791634c7c8 456 Gene3D G3DSA:3.40.605.10 40 447 7.1E-154 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DB34_10565 37c0f73116232459d8b7d5791634c7c8 456 SUPERFAMILY SSF53720 3 455 2.23E-143 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DB34_10565 37c0f73116232459d8b7d5791634c7c8 456 Gene3D G3DSA:3.40.309.10 233 422 7.1E-154 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DB34_10565 37c0f73116232459d8b7d5791634c7c8 456 Pfam PF00171 Aldehyde dehydrogenase family 4 452 2.7E-138 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DB34_10565 37c0f73116232459d8b7d5791634c7c8 456 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 257 268 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 DB34_05180 5c4f4ad4b1699d8cbb919236d31bcf00 283 Pfam PF13344 Haloacid dehalogenase-like hydrolase 18 114 1.2E-14 T 11-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA DB34_05180 5c4f4ad4b1699d8cbb919236d31bcf00 283 Gene3D G3DSA:3.40.50.1000 82 201 2.8E-50 T 11-10-2018 IPR023214 HAD superfamily DB34_05180 5c4f4ad4b1699d8cbb919236d31bcf00 283 TIGRFAM TIGR01459 HAD-SF-IIA-hyp4: HAD hydrolase, TIGR01459 family 8 249 9.2E-55 T 11-10-2018 IPR006356 HAD-superfamily hydrolase, subfamily IIA, hypothetical 3 DB34_05180 5c4f4ad4b1699d8cbb919236d31bcf00 283 Gene3D G3DSA:3.40.50.1000 15 253 2.8E-50 T 11-10-2018 IPR023214 HAD superfamily DB34_05180 5c4f4ad4b1699d8cbb919236d31bcf00 283 SUPERFAMILY SSF56784 13 254 1.4E-43 T 11-10-2018 IPR036412 HAD-like superfamily DB34_05180 5c4f4ad4b1699d8cbb919236d31bcf00 283 Pfam PF13242 HAD-hyrolase-like 201 258 1.3E-11 T 11-10-2018 DB34_05180 5c4f4ad4b1699d8cbb919236d31bcf00 283 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 18 250 4.7E-31 T 11-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA DB34_09190 084c46b9a575857c4dc649557ba451c9 343 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 11 336 6.3E-101 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 DB34_09190 084c46b9a575857c4dc649557ba451c9 343 SMART SM01329 7 338 5.1E-166 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 DB34_09190 084c46b9a575857c4dc649557ba451c9 343 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 234 253 - T 11-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 DB34_09190 084c46b9a575857c4dc649557ba451c9 343 SUPERFAMILY SSF53659 6 340 1.21E-119 T 11-10-2018 DB34_09190 084c46b9a575857c4dc649557ba451c9 343 Gene3D G3DSA:3.40.718.10 1 343 2.9E-129 T 11-10-2018 DB34_07495 5484634e282b27712f2af4b3556de3b8 169 Pfam PF00011 Hsp20/alpha crystallin family 42 133 1.6E-14 T 11-10-2018 IPR002068 Alpha crystallin/Hsp20 domain DB34_07495 5484634e282b27712f2af4b3556de3b8 169 SUPERFAMILY SSF49764 29 133 6.28E-18 T 11-10-2018 IPR008978 HSP20-like chaperone DB34_07495 5484634e282b27712f2af4b3556de3b8 169 Gene3D G3DSA:2.60.40.790 31 134 5.8E-17 T 11-10-2018 IPR008978 HSP20-like chaperone DB34_11750 5b9013d5669236b3de952df921cc13ec 339 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 140 330 1.1E-20 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB34_11750 5b9013d5669236b3de952df921cc13ec 339 Gene3D G3DSA:1.10.3720.10 109 332 1.3E-20 T 11-10-2018 IPR035906 MetI-like superfamily DB34_11750 5b9013d5669236b3de952df921cc13ec 339 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 17 54 9.4E-10 T 11-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DB34_11750 5b9013d5669236b3de952df921cc13ec 339 SUPERFAMILY SSF161098 115 316 1.27E-22 T 11-10-2018 IPR035906 MetI-like superfamily DB34_12200 d57e58d44101cf917b4fcf372bd10099 320 Pfam PF00149 Calcineurin-like phosphoesterase 21 241 3.1E-16 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 DB34_12200 d57e58d44101cf917b4fcf372bd10099 320 SUPERFAMILY SSF56300 22 285 1.15E-35 T 11-10-2018 DB34_12200 d57e58d44101cf917b4fcf372bd10099 320 Gene3D G3DSA:3.60.21.10 17 309 1.9E-28 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like DB34_09015 88fe46431caacccbb24583a56a3ad21f 220 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 1 220 22.039 T 11-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 DB34_09015 88fe46431caacccbb24583a56a3ad21f 220 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 15 71 3.1E-5 T 11-10-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 DB34_09015 88fe46431caacccbb24583a56a3ad21f 220 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 16 218 1.1E-42 T 11-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 DB34_09015 88fe46431caacccbb24583a56a3ad21f 220 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 117 215 1.4E-27 T 11-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 DB34_09015 88fe46431caacccbb24583a56a3ad21f 220 Gene3D G3DSA:2.160.20.70 111 220 6.3E-29 T 11-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 DB34_09015 88fe46431caacccbb24583a56a3ad21f 220 SUPERFAMILY SSF63848 114 219 6.93E-28 T 11-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 DB34_00445 cf7e7bcea25a912695704766b1c5ba70 577 PIRSF PIRSF003128 1 577 2.0E-156 T 11-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 DB34_00445 cf7e7bcea25a912695704766b1c5ba70 577 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 571 6.3E-145 T 11-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 DB34_00445 cf7e7bcea25a912695704766b1c5ba70 577 SUPERFAMILY SSF52540 2 526 7.51E-30 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_00445 cf7e7bcea25a912695704766b1c5ba70 577 Pfam PF02463 RecF/RecN/SMC N terminal domain 14 527 2.0E-16 T 11-10-2018 IPR003395 RecF/RecN/SMC, N-terminal DB34_00445 cf7e7bcea25a912695704766b1c5ba70 577 Gene3D G3DSA:3.40.50.300 267 572 1.1E-50 T 11-10-2018 DB34_00445 cf7e7bcea25a912695704766b1c5ba70 577 Gene3D G3DSA:3.40.50.300 1 251 1.3E-41 T 11-10-2018 DB34_00445 cf7e7bcea25a912695704766b1c5ba70 577 SUPERFAMILY SSF52540 1 219 2.09E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_10170 9b5f5f6aefe139bd2cb6521de1b5ca13 451 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB34_10170 9b5f5f6aefe139bd2cb6521de1b5ca13 451 SMART SM00382 46 228 5.1E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_10170 9b5f5f6aefe139bd2cb6521de1b5ca13 451 Pfam PF09821 C-terminal AAA-associated domain 320 437 5.7E-41 T 11-10-2018 IPR018632 C-terminal AAA-associated domain DB34_10170 9b5f5f6aefe139bd2cb6521de1b5ca13 451 Pfam PF00005 ABC transporter 37 176 1.3E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB34_10170 9b5f5f6aefe139bd2cb6521de1b5ca13 451 SUPERFAMILY SSF52540 18 260 2.35E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_10170 9b5f5f6aefe139bd2cb6521de1b5ca13 451 Gene3D G3DSA:3.40.50.300 15 274 3.9E-64 T 11-10-2018 DB34_06840 774517e0f29a79ac8ed042057889fca3 384 Pfam PF11863 Protein of unknown function (DUF3383) 5 82 7.6E-13 T 11-10-2018 IPR021808 Protein of unknown function DUF3383 DB34_06840 774517e0f29a79ac8ed042057889fca3 384 Pfam PF11863 Protein of unknown function (DUF3383) 94 379 3.9E-55 T 11-10-2018 IPR021808 Protein of unknown function DUF3383 DB34_00050 4c67b27fc32297406d671b407b5a611d 372 SUPERFAMILY SSF50022 29 143 2.36E-34 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 DB34_00050 4c67b27fc32297406d671b407b5a611d 372 Pfam PF00355 Rieske [2Fe-2S] domain 35 115 2.3E-19 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 DB34_00050 4c67b27fc32297406d671b407b5a611d 372 Gene3D G3DSA:2.102.10.10 31 160 7.4E-35 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 DB34_00050 4c67b27fc32297406d671b407b5a611d 372 SUPERFAMILY SSF55961 133 357 4.18E-24 T 11-10-2018 DB34_10540 add2a6202739fb45a390d89cf713acd6 720 Pfam PF13249 Squalene-hopene cyclase N-terminal domain 63 354 1.4E-96 T 11-10-2018 IPR032697 Squalene cyclase, N-terminal Reactome: R-HSA-191273|Reactome: R-HSA-2426168 DB34_10540 add2a6202739fb45a390d89cf713acd6 720 Gene3D G3DSA:1.50.10.20 83 364 1.2E-211 T 11-10-2018 DB34_10540 add2a6202739fb45a390d89cf713acd6 720 TIGRFAM TIGR01507 hopene_cyclase: squalene-hopene cyclase 57 665 9.6E-189 T 11-10-2018 IPR006400 Squalene hopene cyclase GO:0016866|GO:0019746 KEGG: 00909+4.2.1.129+5.4.99.17|MetaCyc: PWY-6098|MetaCyc: PWY-7072 DB34_10540 add2a6202739fb45a390d89cf713acd6 720 Pfam PF13243 Squalene-hopene cyclase C-terminal domain 366 665 6.2E-120 T 11-10-2018 IPR032696 Squalene cyclase, C-terminal Reactome: R-HSA-191273|Reactome: R-HSA-2426168 DB34_10540 add2a6202739fb45a390d89cf713acd6 720 TIGRFAM TIGR01787 squalene_cyclas: squalene/oxidosqualene cyclases 61 665 4.4E-155 T 11-10-2018 IPR018333 Squalene cyclase GO:0016866 Reactome: R-HSA-191273|Reactome: R-HSA-2426168 DB34_10540 add2a6202739fb45a390d89cf713acd6 720 SUPERFAMILY SSF48239 357 715 3.14E-97 T 11-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid DB34_10540 add2a6202739fb45a390d89cf713acd6 720 Gene3D G3DSA:1.50.10.20 65 665 1.2E-211 T 11-10-2018 DB34_10540 add2a6202739fb45a390d89cf713acd6 720 SUPERFAMILY SSF48239 86 356 1.18E-67 T 11-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid DB34_04490 d32bfc36b1a327d6415b21e0fa79516d 110 Pfam PF12800 4Fe-4S binding domain 7 23 0.7 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DB34_04490 d32bfc36b1a327d6415b21e0fa79516d 110 Gene3D G3DSA:3.30.70.20 2 104 2.3E-30 T 11-10-2018 DB34_04490 d32bfc36b1a327d6415b21e0fa79516d 110 PRINTS PR00354 7Fe ferredoxin signature 19 29 2.8E-17 T 11-10-2018 IPR000813 7Fe ferredoxin GO:0009055 DB34_04490 d32bfc36b1a327d6415b21e0fa79516d 110 PRINTS PR00354 7Fe ferredoxin signature 9 19 2.8E-17 T 11-10-2018 IPR000813 7Fe ferredoxin GO:0009055 DB34_04490 d32bfc36b1a327d6415b21e0fa79516d 110 PRINTS PR00354 7Fe ferredoxin signature 35 52 2.8E-17 T 11-10-2018 IPR000813 7Fe ferredoxin GO:0009055 DB34_04490 d32bfc36b1a327d6415b21e0fa79516d 110 Pfam PF11953 Domain of unknown function (DUF3470) 65 103 2.4E-18 T 11-10-2018 IPR022569 Ferredoxin, C-terminal DB34_04490 d32bfc36b1a327d6415b21e0fa79516d 110 Pfam PF00037 4Fe-4S binding domain 34 55 1.6E-7 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DB34_04490 d32bfc36b1a327d6415b21e0fa79516d 110 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DB34_04490 d32bfc36b1a327d6415b21e0fa79516d 110 SUPERFAMILY SSF54862 3 99 7.09E-23 T 11-10-2018 DB34_02320 f34debd6a659b7ff754c49adf19c6833 187 SUPERFAMILY SSF48150 6 186 2.62E-68 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 DB34_02320 f34debd6a659b7ff754c49adf19c6833 187 Pfam PF03352 Methyladenine glycosylase 10 182 1.1E-70 T 11-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 DB34_02320 f34debd6a659b7ff754c49adf19c6833 187 Gene3D G3DSA:1.10.340.30 5 186 3.5E-73 T 11-10-2018 DB34_08870 c9e2123fec52dacb8baf8c032d479f13 401 Gene3D G3DSA:2.40.30.170 263 384 7.5E-34 T 11-10-2018 DB34_08870 c9e2123fec52dacb8baf8c032d479f13 401 Gene3D G3DSA:1.10.287.470 144 211 4.6E-9 T 11-10-2018 DB34_08870 c9e2123fec52dacb8baf8c032d479f13 401 Pfam PF00529 HlyD membrane-fusion protein of T1SS 52 369 1.7E-10 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 DB34_08870 c9e2123fec52dacb8baf8c032d479f13 401 Gene3D G3DSA:2.40.50.100 76 140 4.5E-15 T 11-10-2018 DB34_08870 c9e2123fec52dacb8baf8c032d479f13 401 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 76 323 2.0E-19 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DB34_08870 c9e2123fec52dacb8baf8c032d479f13 401 SUPERFAMILY SSF111369 72 131 5.23E-11 T 11-10-2018 DB34_08870 c9e2123fec52dacb8baf8c032d479f13 401 SUPERFAMILY SSF111369 223 321 1.44E-12 T 11-10-2018 DB34_13740 e9f98748eefb77b73d7cd25169acf004 243 SMART SM01252 8 110 2.9E-27 T 11-10-2018 IPR018004 KilA, N-terminal/APSES-type HTH, DNA-binding DB34_13740 e9f98748eefb77b73d7cd25169acf004 243 Pfam PF04383 KilA-N domain 10 108 8.4E-16 T 11-10-2018 IPR018004 KilA, N-terminal/APSES-type HTH, DNA-binding DB34_13740 e9f98748eefb77b73d7cd25169acf004 243 Pfam PF03374 Phage antirepressor protein KilAC domain 139 239 3.0E-18 T 11-10-2018 IPR005039 Antirepressor protein, C-terminal GO:0003677 DB34_12915 a2119d46562d98bffa371daac814357b 608 Gene3D G3DSA:3.90.550.60 11 386 2.5E-91 T 11-10-2018 DB34_12915 a2119d46562d98bffa371daac814357b 608 SUPERFAMILY SSF53448 168 364 7.12E-12 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB34_12915 a2119d46562d98bffa371daac814357b 608 Pfam PF00535 Glycosyl transferase family 2 169 287 4.5E-6 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DB34_02265 ad7ed635da9218ce198dfea86277067d 114 Gene3D G3DSA:2.10.150.10 9 114 7.9E-45 T 11-10-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DB34_02265 ad7ed635da9218ce198dfea86277067d 114 Hamap MF_01954 Urease subunit beta [ureB]. 12 112 30.555 T 11-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DB34_02265 ad7ed635da9218ce198dfea86277067d 114 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 13 113 6.8E-41 T 11-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DB34_02265 ad7ed635da9218ce198dfea86277067d 114 Pfam PF00699 Urease beta subunit 14 110 8.8E-43 T 11-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DB34_02265 ad7ed635da9218ce198dfea86277067d 114 SUPERFAMILY SSF51278 13 113 7.98E-45 T 11-10-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DB34_11095 cf6344422e847d44b24a549430c519e2 274 Gene3D G3DSA:3.40.140.10 133 273 9.5E-41 T 11-10-2018 DB34_11095 cf6344422e847d44b24a549430c519e2 274 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 38 265 1.6E-49 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 DB34_11095 cf6344422e847d44b24a549430c519e2 274 SUPERFAMILY SSF53927 34 271 2.11E-64 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 DB34_11095 cf6344422e847d44b24a549430c519e2 274 PIRSF PIRSF015626 12 274 9.1E-64 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 DB34_11095 cf6344422e847d44b24a549430c519e2 274 Gene3D G3DSA:3.10.20.10 41 127 1.7E-9 T 11-10-2018 DB34_11095 cf6344422e847d44b24a549430c519e2 274 Pfam PF02634 FdhD/NarQ family 39 271 2.4E-62 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 DB34_11095 cf6344422e847d44b24a549430c519e2 274 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 7 274 25.308 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 DB34_02715 3132686b1865b97d9137e774b1bf13d5 309 Gene3D G3DSA:3.40.50.300 103 292 2.2E-111 T 11-10-2018 DB34_02715 3132686b1865b97d9137e774b1bf13d5 309 Gene3D G3DSA:1.20.120.140 6 301 2.2E-111 T 11-10-2018 DB34_02715 3132686b1865b97d9137e774b1bf13d5 309 Pfam PF02881 SRP54-type protein, helical bundle domain 20 83 9.1E-11 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DB34_02715 3132686b1865b97d9137e774b1bf13d5 309 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 32 302 1.3E-100 T 11-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 DB34_02715 3132686b1865b97d9137e774b1bf13d5 309 SUPERFAMILY SSF52540 101 295 3.94E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_02715 3132686b1865b97d9137e774b1bf13d5 309 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 32 304 59.889 T 11-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 DB34_02715 3132686b1865b97d9137e774b1bf13d5 309 SMART SM00382 102 253 1.3E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_02715 3132686b1865b97d9137e774b1bf13d5 309 Pfam PF00448 SRP54-type protein, GTPase domain 103 303 1.8E-71 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DB34_02715 3132686b1865b97d9137e774b1bf13d5 309 SUPERFAMILY SSF47364 4 81 6.15E-20 T 11-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 DB34_02715 3132686b1865b97d9137e774b1bf13d5 309 SMART SM00962 103 304 3.7E-112 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DB34_02715 3132686b1865b97d9137e774b1bf13d5 309 SMART SM00963 9 88 4.7E-19 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DB34_13430 76a4051983948d480890f9bb7f3cbc15 97 PRINTS PR00297 10kDa chaperonin signature 26 47 4.6E-34 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 DB34_13430 76a4051983948d480890f9bb7f3cbc15 97 PRINTS PR00297 10kDa chaperonin signature 4 19 4.6E-34 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 DB34_13430 76a4051983948d480890f9bb7f3cbc15 97 PRINTS PR00297 10kDa chaperonin signature 82 95 4.6E-34 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 DB34_13430 76a4051983948d480890f9bb7f3cbc15 97 PRINTS PR00297 10kDa chaperonin signature 61 73 4.6E-34 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 DB34_13430 76a4051983948d480890f9bb7f3cbc15 97 Pfam PF00166 Chaperonin 10 Kd subunit 3 95 1.1E-37 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 DB34_13430 76a4051983948d480890f9bb7f3cbc15 97 Gene3D G3DSA:2.30.33.40 1 97 6.4E-41 T 11-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 DB34_13430 76a4051983948d480890f9bb7f3cbc15 97 ProSitePatterns PS00681 Chaperonins cpn10 signature. 4 28 - T 11-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 DB34_13430 76a4051983948d480890f9bb7f3cbc15 97 SUPERFAMILY SSF50129 2 95 1.59E-36 T 11-10-2018 IPR011032 GroES-like superfamily DB34_13430 76a4051983948d480890f9bb7f3cbc15 97 SMART SM00883 3 95 8.2E-62 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 DB34_13430 76a4051983948d480890f9bb7f3cbc15 97 Hamap MF_00580 10 kDa chaperonin [groS]. 3 96 27.345 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 DB34_13450 c6bee416fa93e8e7d18a3c7f5f73bab1 124 TIGRFAM TIGR01689 EcbF-BcbF: capsule biosynthesis phosphatase 1 122 5.1E-55 T 11-10-2018 IPR010039 Capsule biosynthesis phosphatase DB34_13450 c6bee416fa93e8e7d18a3c7f5f73bab1 124 SUPERFAMILY SSF56784 2 103 1.41E-19 T 11-10-2018 IPR036412 HAD-like superfamily DB34_13450 c6bee416fa93e8e7d18a3c7f5f73bab1 124 Gene3D G3DSA:3.40.50.1000 1 123 9.3E-36 T 11-10-2018 IPR023214 HAD superfamily DB34_08400 852090d02535a6132a065431d0770bc4 458 Pfam PF00754 F5/8 type C domain 312 416 6.1E-15 T 11-10-2018 IPR000421 Coagulation factor 5/8 C-terminal domain DB34_08400 852090d02535a6132a065431d0770bc4 458 Gene3D G3DSA:2.60.120.260 287 431 6.1E-22 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily DB34_08400 852090d02535a6132a065431d0770bc4 458 SUPERFAMILY SSF49785 297 430 4.82E-28 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily DB34_00810 b9a1e3bc34f251447641cdc1bc4876b1 455 Pfam PF03109 ABC1 family 104 217 1.3E-28 T 11-10-2018 IPR004147 UbiB domain DB34_00810 b9a1e3bc34f251447641cdc1bc4876b1 455 SUPERFAMILY SSF56112 86 336 3.52E-22 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily DB34_00810 b9a1e3bc34f251447641cdc1bc4876b1 455 Gene3D G3DSA:1.10.510.10 118 311 3.3E-5 T 11-10-2018 DB34_02740 3457ff5eb22b07d0f2cf3d2aa0182527 585 Pfam PF00271 Helicase conserved C-terminal domain 242 338 1.1E-24 T 11-10-2018 IPR001650 Helicase, C-terminal DB34_02740 3457ff5eb22b07d0f2cf3d2aa0182527 585 Gene3D G3DSA:3.30.70.330 469 528 2.2E-6 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily DB34_02740 3457ff5eb22b07d0f2cf3d2aa0182527 585 Gene3D G3DSA:3.40.50.300 4 209 7.4E-64 T 11-10-2018 DB34_02740 3457ff5eb22b07d0f2cf3d2aa0182527 585 SMART SM00487 18 221 1.5E-50 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DB34_02740 3457ff5eb22b07d0f2cf3d2aa0182527 585 Pfam PF03880 DbpA RNA binding domain 468 523 1.3E-14 T 11-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain DB34_02740 3457ff5eb22b07d0f2cf3d2aa0182527 585 Gene3D G3DSA:3.40.50.300 223 385 7.9E-43 T 11-10-2018 DB34_02740 3457ff5eb22b07d0f2cf3d2aa0182527 585 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site DB34_02740 3457ff5eb22b07d0f2cf3d2aa0182527 585 Pfam PF00270 DEAD/DEAH box helicase 23 193 1.4E-42 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DB34_02740 3457ff5eb22b07d0f2cf3d2aa0182527 585 SUPERFAMILY SSF52540 74 356 4.08E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_02740 3457ff5eb22b07d0f2cf3d2aa0182527 585 SMART SM00490 257 338 1.1E-28 T 11-10-2018 IPR001650 Helicase, C-terminal DB34_11860 4365611021a78b94765f48e6fa60d2fa 786 SUPERFAMILY SSF56935 60 786 2.09E-67 T 11-10-2018 DB34_11860 4365611021a78b94765f48e6fa60d2fa 786 Pfam PF07715 TonB-dependent Receptor Plug Domain 67 163 3.1E-9 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain DB34_11860 4365611021a78b94765f48e6fa60d2fa 786 Gene3D G3DSA:2.170.130.10 64 167 4.0E-9 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily DB34_11860 4365611021a78b94765f48e6fa60d2fa 786 Gene3D G3DSA:2.40.170.20 191 786 2.7E-50 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DB34_11860 4365611021a78b94765f48e6fa60d2fa 786 Pfam PF00593 TonB dependent receptor 279 776 3.1E-22 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel DB34_08315 f9496a4fd55c6967746dc298b65c0604 195 Gene3D G3DSA:3.40.50.300 1 195 3.7E-57 T 11-10-2018 DB34_08315 f9496a4fd55c6967746dc298b65c0604 195 SUPERFAMILY SSF52540 1 193 2.57E-30 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_08315 f9496a4fd55c6967746dc298b65c0604 195 Pfam PF01121 Dephospho-CoA kinase 3 179 5.8E-40 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 DB34_08315 f9496a4fd55c6967746dc298b65c0604 195 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 3 187 3.3E-35 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 DB34_08315 f9496a4fd55c6967746dc298b65c0604 195 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 1 192 22.926 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 DB34_02485 e6bc7a3521ceff630ca8f42533fd2e91 363 Gene3D G3DSA:3.40.50.720 202 354 2.7E-49 T 11-10-2018 DB34_02485 e6bc7a3521ceff630ca8f42533fd2e91 363 Pfam PF13478 XdhC Rossmann domain 203 348 8.5E-41 T 11-10-2018 IPR027051 XdhC Rossmann domain DB34_02485 e6bc7a3521ceff630ca8f42533fd2e91 363 Pfam PF02625 XdhC and CoxI family 20 87 3.7E-21 T 11-10-2018 IPR003777 XdhC- CoxI DB34_00025 38361235470886cc205f85025e869df6 328 Gene3D G3DSA:3.40.50.1820 11 326 6.4E-107 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold DB34_00025 38361235470886cc205f85025e869df6 328 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 21 323 1.3E-130 T 11-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 DB34_00025 38361235470886cc205f85025e869df6 328 SUPERFAMILY SSF53474 15 309 1.16E-66 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold DB34_00025 38361235470886cc205f85025e869df6 328 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 75 86 1.9E-14 T 11-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 DB34_00025 38361235470886cc205f85025e869df6 328 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 118 132 1.9E-14 T 11-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 DB34_00025 38361235470886cc205f85025e869df6 328 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 49 57 1.9E-14 T 11-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 DB34_00025 38361235470886cc205f85025e869df6 328 PIRSF PIRSF006431 12 327 7.3E-140 T 11-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 DB34_00025 38361235470886cc205f85025e869df6 328 PRINTS PR00111 Alpha/beta hydrolase fold signature 118 131 2.0E-5 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DB34_00025 38361235470886cc205f85025e869df6 328 PRINTS PR00111 Alpha/beta hydrolase fold signature 132 145 2.0E-5 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DB34_00025 38361235470886cc205f85025e869df6 328 PRINTS PR00111 Alpha/beta hydrolase fold signature 72 87 2.0E-5 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DB34_00025 38361235470886cc205f85025e869df6 328 Pfam PF00561 alpha/beta hydrolase fold 48 309 8.7E-35 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DB34_05590 aa579d40d3c88e576625c921152ffaca 196 Pfam PF00929 Exonuclease 3 185 5.0E-15 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DB34_05590 aa579d40d3c88e576625c921152ffaca 196 SUPERFAMILY SSF53098 2 190 2.87E-37 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily DB34_05590 aa579d40d3c88e576625c921152ffaca 196 Gene3D G3DSA:3.30.420.10 1 193 3.0E-36 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DB34_05590 aa579d40d3c88e576625c921152ffaca 196 SMART SM00479 1 194 1.2E-16 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DB34_05810 ca6307a455356d8efa83e8e59afd67a7 230 Gene3D G3DSA:3.40.50.620 27 225 2.1E-39 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DB34_05810 ca6307a455356d8efa83e8e59afd67a7 230 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 29 213 20.238 T 11-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 DB34_05810 ca6307a455356d8efa83e8e59afd67a7 230 SUPERFAMILY SSF52374 29 213 1.41E-36 T 11-10-2018 DB34_05810 ca6307a455356d8efa83e8e59afd67a7 230 Pfam PF01467 Cytidylyltransferase-like 33 213 1.6E-18 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 DB34_00575 92dbb9262bee96c096c60d38aef3d4ad 402 Pfam PF00534 Glycosyl transferases group 1 208 325 2.3E-12 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 DB34_00575 92dbb9262bee96c096c60d38aef3d4ad 402 Gene3D G3DSA:3.40.50.2000 187 397 3.0E-31 T 11-10-2018 DB34_00575 92dbb9262bee96c096c60d38aef3d4ad 402 SUPERFAMILY SSF53756 104 389 1.83E-29 T 11-10-2018 DB34_10615 490381a01145a18c679dc2bdc31c9529 146 Pfam PF11162 Protein of unknown function (DUF2946) 8 139 4.3E-9 T 11-10-2018 IPR021333 Protein of unknown function DUF2946 DB34_10325 4fd0a3def9406cd357bb84dfc02dcda5 113 Pfam PF03831 PhnA domain 44 112 5.7E-32 T 11-10-2018 IPR013988 PhnA protein, C-terminal DB34_10325 4fd0a3def9406cd357bb84dfc02dcda5 113 Gene3D G3DSA:2.20.25.10 2 38 1.6E-15 T 11-10-2018 DB34_10325 4fd0a3def9406cd357bb84dfc02dcda5 113 SUPERFAMILY SSF57783 2 33 3.23E-11 T 11-10-2018 DB34_10325 4fd0a3def9406cd357bb84dfc02dcda5 113 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 2 112 3.1E-41 T 11-10-2018 IPR004624 PhnA protein DB34_10325 4fd0a3def9406cd357bb84dfc02dcda5 113 Pfam PF08274 PhnA Zinc-Ribbon 2 27 5.1E-14 T 11-10-2018 IPR013987 PhnA protein, N-terminal DB34_10325 4fd0a3def9406cd357bb84dfc02dcda5 113 SUPERFAMILY SSF82057 39 112 3.94E-25 T 11-10-2018 DB34_10325 4fd0a3def9406cd357bb84dfc02dcda5 113 Gene3D G3DSA:2.30.30.40 41 113 5.1E-32 T 11-10-2018 DB34_04790 7da92c98828503d16d5f6b30a5b620f1 150 Pfam PF03692 Putative zinc- or iron-chelating domain 23 91 2.1E-7 T 11-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein DB34_04790 7da92c98828503d16d5f6b30a5b620f1 150 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 1 144 37.745 T 11-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 DB34_04790 7da92c98828503d16d5f6b30a5b620f1 150 PIRSF PIRSF006173 1 144 7.7E-63 T 11-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 DB34_12335 4a69da6714c4496d79786b7113063134 219 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 24 171 31.612 T 11-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_12335 4a69da6714c4496d79786b7113063134 219 Gene3D G3DSA:3.30.460.80 4 143 1.8E-42 T 11-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_12335 4a69da6714c4496d79786b7113063134 219 SUPERFAMILY SSF143243 33 196 1.44E-55 T 11-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_12335 4a69da6714c4496d79786b7113063134 219 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 44 164 3.3E-45 T 11-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_12335 4a69da6714c4496d79786b7113063134 219 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 92 150 6.0E-18 T 11-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_12335 4a69da6714c4496d79786b7113063134 219 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 42 163 2.7E-44 T 11-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_08420 63ed20b4c3ec773c1eae2ae7a6c5d0d0 124 Pfam PF06078 Bacterial protein of unknown function (DUF937) 7 111 8.0E-9 T 11-10-2018 IPR009282 Protein of unknown function DUF937 DB34_08420 63ed20b4c3ec773c1eae2ae7a6c5d0d0 124 Gene3D G3DSA:1.10.10.690 2 124 5.5E-27 T 11-10-2018 IPR027405 YidB-like DB34_08420 63ed20b4c3ec773c1eae2ae7a6c5d0d0 124 SUPERFAMILY SSF140804 9 118 5.36E-27 T 11-10-2018 IPR027405 YidB-like DB34_04280 1893a782479f9a50019b9e56af7d6c3f 274 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 159 187 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DB34_04280 1893a782479f9a50019b9e56af7d6c3f 274 SUPERFAMILY SSF51735 22 261 2.42E-57 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily DB34_04280 1893a782479f9a50019b9e56af7d6c3f 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 224 244 1.7E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_04280 1893a782479f9a50019b9e56af7d6c3f 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 193 210 1.7E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_04280 1893a782479f9a50019b9e56af7d6c3f 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 23 40 1.7E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_04280 1893a782479f9a50019b9e56af7d6c3f 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 99 110 1.7E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_04280 1893a782479f9a50019b9e56af7d6c3f 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 191 1.7E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_04280 1893a782479f9a50019b9e56af7d6c3f 274 Gene3D G3DSA:3.40.50.720 21 268 1.8E-59 T 11-10-2018 DB34_04280 1893a782479f9a50019b9e56af7d6c3f 274 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 160 4.4E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_04280 1893a782479f9a50019b9e56af7d6c3f 274 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 99 110 4.4E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_04280 1893a782479f9a50019b9e56af7d6c3f 274 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 172 191 4.4E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_04280 1893a782479f9a50019b9e56af7d6c3f 274 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 33 259 1.8E-38 T 11-10-2018 DB34_08620 72e155d81181b7e71062c6ea06bdf50e 158 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 158 1.6E-67 T 11-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 DB34_08620 72e155d81181b7e71062c6ea06bdf50e 158 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 11-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_08620 72e155d81181b7e71062c6ea06bdf50e 158 Gene3D G3DSA:1.10.455.10 2 158 1.6E-58 T 11-10-2018 IPR036823 Ribosomal protein S7 domain superfamily DB34_08620 72e155d81181b7e71062c6ea06bdf50e 158 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 158 35.85 T 11-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 DB34_08620 72e155d81181b7e71062c6ea06bdf50e 158 Pfam PF00177 Ribosomal protein S7p/S5e 1 151 1.4E-64 T 11-10-2018 IPR023798 Ribosomal protein S7 domain DB34_08620 72e155d81181b7e71062c6ea06bdf50e 158 PIRSF PIRSF002122 2 158 1.1E-56 T 11-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 DB34_08620 72e155d81181b7e71062c6ea06bdf50e 158 SUPERFAMILY SSF47973 3 151 3.27E-57 T 11-10-2018 IPR036823 Ribosomal protein S7 domain superfamily DB34_02550 2cf21edf1d6af852e97c57660d7ad8f9 179 Gene3D G3DSA:3.40.50.620 8 178 3.7E-49 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DB34_02550 2cf21edf1d6af852e97c57660d7ad8f9 179 Pfam PF01467 Cytidylyltransferase-like 14 147 4.1E-17 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 DB34_02550 2cf21edf1d6af852e97c57660d7ad8f9 179 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 12 68 8.1E-18 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 DB34_02550 2cf21edf1d6af852e97c57660d7ad8f9 179 SUPERFAMILY SSF52374 11 167 2.47E-38 T 11-10-2018 DB34_02550 2cf21edf1d6af852e97c57660d7ad8f9 179 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 11 172 30.909 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 DB34_02550 2cf21edf1d6af852e97c57660d7ad8f9 179 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 11 29 2.3E-32 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 DB34_02550 2cf21edf1d6af852e97c57660d7ad8f9 179 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 126 148 2.3E-32 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 DB34_02550 2cf21edf1d6af852e97c57660d7ad8f9 179 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 99 115 2.3E-32 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 DB34_02550 2cf21edf1d6af852e97c57660d7ad8f9 179 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 29 50 2.3E-32 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 DB34_02550 2cf21edf1d6af852e97c57660d7ad8f9 179 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 13 169 4.3E-50 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 DB34_01650 c78dce710fbaa20b6580116e4ef826f7 222 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 26 218 1.4E-57 T 11-10-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like DB34_01650 c78dce710fbaa20b6580116e4ef826f7 222 Gene3D G3DSA:2.60.120.590 20 221 9.8E-58 T 11-10-2018 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily DB34_01650 c78dce710fbaa20b6580116e4ef826f7 222 SUPERFAMILY SSF51197 25 220 3.3E-56 T 11-10-2018 DB34_09630 0f9233f0b8208a0cacc33fef58b25bba 386 Pfam PF04551 GcpE protein 16 357 1.0E-131 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 DB34_09630 0f9233f0b8208a0cacc33fef58b25bba 386 Gene3D G3DSA:3.30.413.10 265 365 1.8E-25 T 11-10-2018 DB34_09630 0f9233f0b8208a0cacc33fef58b25bba 386 SUPERFAMILY SSF56014 270 360 1.38E-14 T 11-10-2018 DB34_09630 0f9233f0b8208a0cacc33fef58b25bba 386 PIRSF PIRSF004640 5 368 1.4E-146 T 11-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 DB34_09630 0f9233f0b8208a0cacc33fef58b25bba 386 SUPERFAMILY SSF51412 26 137 1.19E-10 T 11-10-2018 DB34_09630 0f9233f0b8208a0cacc33fef58b25bba 386 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 12 357 1.7E-138 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 DB34_09630 0f9233f0b8208a0cacc33fef58b25bba 386 Gene3D G3DSA:3.20.20.20 3 264 2.2E-105 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DB34_09630 0f9233f0b8208a0cacc33fef58b25bba 386 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 10 361 34.076 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 DB34_12450 7115e103c6e0200476e006c4cdc12206 154 TIGRFAM TIGR02944 suf_reg_Xantho: FeS assembly SUF system regulator 1 128 7.6E-34 T 11-10-2018 IPR014290 SUF system FeS cluster assembly regulator DB34_12450 7115e103c6e0200476e006c4cdc12206 154 Gene3D G3DSA:1.10.10.10 1 138 4.0E-31 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB34_12450 7115e103c6e0200476e006c4cdc12206 154 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 3 128 4.6E-27 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type DB34_12450 7115e103c6e0200476e006c4cdc12206 154 Pfam PF02082 Transcriptional regulator 3 82 1.6E-19 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type DB34_12450 7115e103c6e0200476e006c4cdc12206 154 SUPERFAMILY SSF46785 3 130 3.25E-27 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB34_05725 84ce2619708d5ee76dee9bb6b30ef0cb 471 SUPERFAMILY SSF47413 9 70 2.04E-13 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DB34_05725 84ce2619708d5ee76dee9bb6b30ef0cb 471 Pfam PF09856 Predicted transcriptional regulator (DUF2083) 308 464 7.3E-56 T 11-10-2018 IPR018653 Domain of unknown function DUF2083,transcriptional regulator DB34_05725 84ce2619708d5ee76dee9bb6b30ef0cb 471 Pfam PF01381 Helix-turn-helix 14 68 5.1E-11 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DB34_05725 84ce2619708d5ee76dee9bb6b30ef0cb 471 PIRSF PIRSF019251 3 469 2.0E-142 T 11-10-2018 IPR026281 HTH-type transcriptional regulator RamB GO:0006355 DB34_05725 84ce2619708d5ee76dee9bb6b30ef0cb 471 Pfam PF06114 IrrE N-terminal-like domain 185 307 6.0E-12 T 11-10-2018 IPR010359 IrrE N-terminal-like domain DB34_05725 84ce2619708d5ee76dee9bb6b30ef0cb 471 Gene3D G3DSA:1.10.260.40 10 91 4.9E-14 T 11-10-2018 DB34_05725 84ce2619708d5ee76dee9bb6b30ef0cb 471 SMART SM00530 13 68 9.3E-12 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DB34_04665 3865819054b1b751abf5869a482f9d94 272 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 13 264 3.1E-82 T 11-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 DB34_04665 3865819054b1b751abf5869a482f9d94 272 SUPERFAMILY SSF161098 10 259 3.14E-48 T 11-10-2018 IPR035906 MetI-like superfamily DB34_04665 3865819054b1b751abf5869a482f9d94 272 Gene3D G3DSA:1.10.3720.10 11 268 4.0E-58 T 11-10-2018 IPR035906 MetI-like superfamily DB34_04665 3865819054b1b751abf5869a482f9d94 272 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 73 268 1.4E-17 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB34_08290 641c5317b24fd70eb3e633586cc9fe09 447 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 80 98 5.9E-19 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DB34_08290 641c5317b24fd70eb3e633586cc9fe09 447 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 395 408 5.9E-19 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DB34_08290 641c5317b24fd70eb3e633586cc9fe09 447 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 293 312 5.9E-19 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DB34_08290 641c5317b24fd70eb3e633586cc9fe09 447 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 100 112 5.9E-19 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DB34_08290 641c5317b24fd70eb3e633586cc9fe09 447 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 213 226 5.9E-19 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DB34_08290 641c5317b24fd70eb3e633586cc9fe09 447 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 57 299 2.9E-54 T 11-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 DB34_08290 641c5317b24fd70eb3e633586cc9fe09 447 PRINTS PR01181 Diaminopimelate decarboxylase signature 405 427 1.8E-25 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DB34_08290 641c5317b24fd70eb3e633586cc9fe09 447 PRINTS PR01181 Diaminopimelate decarboxylase signature 98 115 1.8E-25 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DB34_08290 641c5317b24fd70eb3e633586cc9fe09 447 PRINTS PR01181 Diaminopimelate decarboxylase signature 322 340 1.8E-25 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DB34_08290 641c5317b24fd70eb3e633586cc9fe09 447 PRINTS PR01181 Diaminopimelate decarboxylase signature 187 196 1.8E-25 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DB34_08290 641c5317b24fd70eb3e633586cc9fe09 447 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 80 98 - T 11-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site DB34_08290 641c5317b24fd70eb3e633586cc9fe09 447 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 36 438 38.132 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DB34_08290 641c5317b24fd70eb3e633586cc9fe09 447 SUPERFAMILY SSF51419 47 305 6.8E-71 T 11-10-2018 IPR029066 PLP-binding barrel DB34_08290 641c5317b24fd70eb3e633586cc9fe09 447 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 249 264 - T 11-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site DB34_08290 641c5317b24fd70eb3e633586cc9fe09 447 Gene3D G3DSA:2.40.37.10 38 434 1.1E-133 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DB34_08290 641c5317b24fd70eb3e633586cc9fe09 447 SUPERFAMILY SSF50621 278 440 3.77E-48 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DB34_08290 641c5317b24fd70eb3e633586cc9fe09 447 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 31 437 4.4E-131 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DB34_08290 641c5317b24fd70eb3e633586cc9fe09 447 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 300 395 2.1E-20 T 11-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 DB34_08290 641c5317b24fd70eb3e633586cc9fe09 447 Gene3D G3DSA:3.20.20.10 55 298 1.1E-133 T 11-10-2018 IPR029066 PLP-binding barrel DB34_02335 35d5beef1b67962d486506a425e0e523 308 SUPERFAMILY SSF56281 29 306 3.11E-44 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DB34_02335 35d5beef1b67962d486506a425e0e523 308 Pfam PF00753 Metallo-beta-lactamase superfamily 49 225 7.0E-15 T 11-10-2018 IPR001279 Metallo-beta-lactamase DB34_02335 35d5beef1b67962d486506a425e0e523 308 Gene3D G3DSA:3.60.15.10 21 308 7.8E-106 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DB34_02335 35d5beef1b67962d486506a425e0e523 308 SMART SM00849 35 225 4.6E-19 T 11-10-2018 IPR001279 Metallo-beta-lactamase DB34_08575 4967b2aaf8e664545cd1d758d8c8cf20 450 SUPERFAMILY SSF111369 77 317 9.94E-29 T 11-10-2018 DB34_08575 4967b2aaf8e664545cd1d758d8c8cf20 450 Gene3D G3DSA:1.10.287.470 127 195 2.0E-64 T 11-10-2018 DB34_08575 4967b2aaf8e664545cd1d758d8c8cf20 450 Gene3D G3DSA:2.40.30.170 77 320 2.0E-64 T 11-10-2018 DB34_08575 4967b2aaf8e664545cd1d758d8c8cf20 450 Gene3D G3DSA:2.40.50.100 89 239 2.0E-64 T 11-10-2018 DB34_08575 4967b2aaf8e664545cd1d758d8c8cf20 450 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 90 313 1.2E-21 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DB34_08575 4967b2aaf8e664545cd1d758d8c8cf20 450 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 66 394 4.6E-57 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 DB34_08575 4967b2aaf8e664545cd1d758d8c8cf20 450 Gene3D G3DSA:2.40.420.20 72 379 2.0E-64 T 11-10-2018 DB34_10405 8eccc116e6bde31fbdf592ee4892f503 451 SUPERFAMILY SSF75304 5 436 7.85E-118 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DB34_10405 8eccc116e6bde31fbdf592ee4892f503 451 Pfam PF01425 Amidase 24 427 2.2E-90 T 11-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DB34_10405 8eccc116e6bde31fbdf592ee4892f503 451 TIGRFAM TIGR02715 amido_AtzE: amidohydrolase, AtzE family 8 440 9.5E-178 T 11-10-2018 IPR014087 Amidohydrolase, AtzE type KEGG: 00791+3.5.1.84|MetaCyc: PWY-5169 DB34_10405 8eccc116e6bde31fbdf592ee4892f503 451 Gene3D G3DSA:3.90.1300.10 6 438 2.6E-124 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DB34_00175 1fc1ec9a7847ca78a5a17baa93307c0b 339 SUPERFAMILY SSF53597 157 297 7.46E-18 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 DB34_00175 1fc1ec9a7847ca78a5a17baa93307c0b 339 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 53 94 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 DB34_00175 1fc1ec9a7847ca78a5a17baa93307c0b 339 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 10 295 7.5E-54 T 11-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 DB34_00175 1fc1ec9a7847ca78a5a17baa93307c0b 339 PIRSF PIRSF006769 257 315 0.026 T 11-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 DB34_00175 1fc1ec9a7847ca78a5a17baa93307c0b 339 PIRSF PIRSF006769 3 258 1.7E-62 T 11-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 DB34_00175 1fc1ec9a7847ca78a5a17baa93307c0b 339 Pfam PF01872 RibD C-terminal domain 172 294 1.1E-7 T 11-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 DB34_00175 1fc1ec9a7847ca78a5a17baa93307c0b 339 SUPERFAMILY SSF53927 10 132 2.84E-28 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 DB34_00175 1fc1ec9a7847ca78a5a17baa93307c0b 339 Gene3D G3DSA:3.40.140.10 5 153 1.3E-27 T 11-10-2018 DB34_00175 1fc1ec9a7847ca78a5a17baa93307c0b 339 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 9 105 1.8E-14 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain DB34_00175 1fc1ec9a7847ca78a5a17baa93307c0b 339 Gene3D G3DSA:3.40.430.10 154 334 9.8E-18 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 DB34_10400 ff970545e9eddc7d7044cb2f70c44b9d 62 Pfam PF13318 Protein of unknown function (DUF4089) 13 57 5.3E-14 T 11-10-2018 IPR025148 Protein of unknown function DUF4089 DB34_07885 0b2917de6f57605913ead6cf92caf3ee 387 SUPERFAMILY SSF103088 252 385 1.1E-26 T 11-10-2018 IPR036737 OmpA-like domain superfamily DB34_07885 0b2917de6f57605913ead6cf92caf3ee 387 Pfam PF00691 OmpA family 278 380 2.6E-15 T 11-10-2018 IPR006665 OmpA-like domain DB34_07885 0b2917de6f57605913ead6cf92caf3ee 387 Gene3D G3DSA:3.30.1330.60 253 386 8.2E-26 T 11-10-2018 IPR036737 OmpA-like domain superfamily DB34_07885 0b2917de6f57605913ead6cf92caf3ee 387 SUPERFAMILY SSF56925 34 251 3.66E-13 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel DB34_07885 0b2917de6f57605913ead6cf92caf3ee 387 Gene3D G3DSA:2.40.160.20 33 212 1.2E-17 T 11-10-2018 DB34_10380 feaec2851fd2fd89b801eb47523633f1 779 Gene3D G3DSA:2.40.170.20 220 770 1.2E-44 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DB34_10380 feaec2851fd2fd89b801eb47523633f1 779 Gene3D G3DSA:2.170.130.10 72 211 4.7E-11 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily DB34_10380 feaec2851fd2fd89b801eb47523633f1 779 SUPERFAMILY SSF56935 80 769 1.32E-71 T 11-10-2018 DB34_10380 feaec2851fd2fd89b801eb47523633f1 779 Pfam PF07715 TonB-dependent Receptor Plug Domain 102 206 2.4E-12 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain DB34_12290 8c171126f9d334a50115b19987ab024c 646 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 88 108 1.6E-8 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 DB34_12290 8c171126f9d334a50115b19987ab024c 646 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 277 299 1.6E-8 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 DB34_12290 8c171126f9d334a50115b19987ab024c 646 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 431 453 1.6E-8 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 DB34_12290 8c171126f9d334a50115b19987ab024c 646 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 162 183 1.0E-60 T 11-10-2018 DB34_12290 8c171126f9d334a50115b19987ab024c 646 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 327 339 1.0E-60 T 11-10-2018 DB34_12290 8c171126f9d334a50115b19987ab024c 646 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 115 135 1.0E-60 T 11-10-2018 DB34_12290 8c171126f9d334a50115b19987ab024c 646 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 259 285 1.0E-60 T 11-10-2018 DB34_12290 8c171126f9d334a50115b19987ab024c 646 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 432 451 1.0E-60 T 11-10-2018 DB34_12290 8c171126f9d334a50115b19987ab024c 646 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 237 258 1.0E-60 T 11-10-2018 DB34_12290 8c171126f9d334a50115b19987ab024c 646 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 86 111 1.0E-60 T 11-10-2018 DB34_12290 8c171126f9d334a50115b19987ab024c 646 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 69 126 2.4E-18 T 11-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_12290 8c171126f9d334a50115b19987ab024c 646 Pfam PF00361 Proton-conducting membrane transporter 138 431 2.8E-89 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_12290 8c171126f9d334a50115b19987ab024c 646 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 7 643 1.7E-236 T 11-10-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_06920 e25a8283246f4e6bb30b776d001f3680 416 Gene3D G3DSA:3.90.1200.10 156 391 3.2E-18 T 11-10-2018 DB34_06920 e25a8283246f4e6bb30b776d001f3680 416 Pfam PF01636 Phosphotransferase enzyme family 84 310 7.8E-21 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase DB34_06920 e25a8283246f4e6bb30b776d001f3680 416 SUPERFAMILY SSF56112 85 370 5.87E-38 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily DB34_04640 c87c5bdccf3d636e7e5c96904e526435 332 Gene3D G3DSA:3.30.1110.10 18 138 9.8E-89 T 11-10-2018 DB34_04640 c87c5bdccf3d636e7e5c96904e526435 332 SUPERFAMILY SSF53613 7 322 1.71E-76 T 11-10-2018 IPR029056 Ribokinase-like DB34_04640 c87c5bdccf3d636e7e5c96904e526435 332 Gene3D G3DSA:3.40.1190.20 11 320 9.8E-89 T 11-10-2018 IPR029056 Ribokinase-like DB34_04640 c87c5bdccf3d636e7e5c96904e526435 332 Pfam PF00294 pfkB family carbohydrate kinase 62 322 7.0E-47 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB DB34_04640 c87c5bdccf3d636e7e5c96904e526435 332 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 278 291 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 DB34_03320 632be0d1d58386d1fd39e4f36dfde89b 308 SUPERFAMILY SSF52467 186 306 4.47E-47 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily DB34_03320 632be0d1d58386d1fd39e4f36dfde89b 308 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 250 276 - T 11-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 DB34_03320 632be0d1d58386d1fd39e4f36dfde89b 308 Gene3D G3DSA:3.40.50.1220 181 308 1.5E-58 T 11-10-2018 DB34_03320 632be0d1d58386d1fd39e4f36dfde89b 308 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 187 269 3.5E-36 T 11-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 DB34_03320 632be0d1d58386d1fd39e4f36dfde89b 308 Pfam PF01012 Electron transfer flavoprotein domain 4 168 1.7E-36 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 DB34_03320 632be0d1d58386d1fd39e4f36dfde89b 308 SMART SM00893 3 179 2.1E-44 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 DB34_03320 632be0d1d58386d1fd39e4f36dfde89b 308 Gene3D G3DSA:3.40.50.620 3 179 5.3E-48 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DB34_03320 632be0d1d58386d1fd39e4f36dfde89b 308 SUPERFAMILY SSF52402 3 179 4.77E-45 T 11-10-2018 DB34_03320 632be0d1d58386d1fd39e4f36dfde89b 308 PIRSF PIRSF000089 1 308 6.5E-104 T 11-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 DB34_01575 888f0cd8b4a3cadef18b6b9e3a777ff9 485 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 22 447 5.9E-83 T 11-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 DB34_01575 888f0cd8b4a3cadef18b6b9e3a777ff9 485 Gene3D G3DSA:1.10.4160.10 4 479 1.2E-96 T 11-10-2018 IPR038271 Purine-cytosine permease superfamily DB34_04350 8ed67a1ee844ae59fe6ff4c013992d2c 239 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 159 235 9.5E-15 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 DB34_04350 8ed67a1ee844ae59fe6ff4c013992d2c 239 SUPERFAMILY SSF74653 153 231 1.96E-16 T 11-10-2018 DB34_04350 8ed67a1ee844ae59fe6ff4c013992d2c 239 PRINTS PR01374 Gram-negative bacterial tonB protein signature 175 193 1.8E-5 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 DB34_04350 8ed67a1ee844ae59fe6ff4c013992d2c 239 PRINTS PR01374 Gram-negative bacterial tonB protein signature 154 175 1.8E-5 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 DB34_04350 8ed67a1ee844ae59fe6ff4c013992d2c 239 PRINTS PR01374 Gram-negative bacterial tonB protein signature 63 73 1.8E-5 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 DB34_04350 8ed67a1ee844ae59fe6ff4c013992d2c 239 Gene3D G3DSA:3.30.1150.10 141 238 1.2E-18 T 11-10-2018 DB34_04350 8ed67a1ee844ae59fe6ff4c013992d2c 239 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 160 237 8.6E-11 T 11-10-2018 IPR006260 TonB/TolA, C-terminal DB34_03595 b517359e3a1bafd2bb2d840c2dbb8107 435 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 34 322 17.352 T 11-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 DB34_03595 b517359e3a1bafd2bb2d840c2dbb8107 435 Pfam PF01171 PP-loop family 47 220 4.7E-42 T 11-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 DB34_03595 b517359e3a1bafd2bb2d840c2dbb8107 435 Gene3D G3DSA:3.40.50.620 41 251 1.3E-51 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DB34_03595 b517359e3a1bafd2bb2d840c2dbb8107 435 SUPERFAMILY SSF52402 43 223 7.28E-44 T 11-10-2018 DB34_03595 b517359e3a1bafd2bb2d840c2dbb8107 435 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 47 222 4.2E-43 T 11-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 DB34_09860 51f46a359c53e0cb3f98ec38489cdc00 314 SUPERFAMILY SSF52151 4 312 2.41E-77 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase DB34_09860 51f46a359c53e0cb3f98ec38489cdc00 314 PIRSF PIRSF000446 1 314 2.5E-96 T 11-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 DB34_09860 51f46a359c53e0cb3f98ec38489cdc00 314 Gene3D G3DSA:3.40.366.10 6 290 6.0E-96 T 11-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 DB34_09860 51f46a359c53e0cb3f98ec38489cdc00 314 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 306 3.9E-43 T 11-10-2018 IPR020801 Polyketide synthase, acyl transferase domain DB34_09860 51f46a359c53e0cb3f98ec38489cdc00 314 Pfam PF00698 Acyl transferase domain 6 282 1.9E-38 T 11-10-2018 IPR014043 Acyl transferase DB34_09860 51f46a359c53e0cb3f98ec38489cdc00 314 SUPERFAMILY SSF55048 132 201 1.83E-15 T 11-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding DB34_09860 51f46a359c53e0cb3f98ec38489cdc00 314 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 4 294 3.8E-98 T 11-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 DB34_09860 51f46a359c53e0cb3f98ec38489cdc00 314 Gene3D G3DSA:3.30.70.250 131 203 6.0E-96 T 11-10-2018 DB34_09070 87d4e3089e995c4778fb387ef97245b7 226 SMART SM00382 30 217 1.5E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_09070 87d4e3089e995c4778fb387ef97245b7 226 SUPERFAMILY SSF52540 2 221 3.38E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_09070 87d4e3089e995c4778fb387ef97245b7 226 Pfam PF00005 ABC transporter 20 169 3.5E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB34_09070 87d4e3089e995c4778fb387ef97245b7 226 Gene3D G3DSA:3.40.50.300 1 225 1.6E-58 T 11-10-2018 DB34_05830 a01a5b1274c559f359c691533228cead 313 Pfam PF03466 LysR substrate binding domain 87 293 5.8E-37 T 11-10-2018 IPR005119 LysR, substrate-binding DB34_05830 a01a5b1274c559f359c691533228cead 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.0E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB34_05830 a01a5b1274c559f359c691533228cead 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.0E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB34_05830 a01a5b1274c559f359c691533228cead 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.0E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB34_05830 a01a5b1274c559f359c691533228cead 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 2.7E-25 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB34_05830 a01a5b1274c559f359c691533228cead 313 SUPERFAMILY SSF46785 1 85 2.34E-26 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB34_05830 a01a5b1274c559f359c691533228cead 313 Gene3D G3DSA:1.10.10.10 1 91 2.8E-31 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB34_05830 a01a5b1274c559f359c691533228cead 313 SUPERFAMILY SSF53850 88 297 3.98E-34 T 11-10-2018 DB34_05830 a01a5b1274c559f359c691533228cead 313 Gene3D G3DSA:3.40.190.10 92 287 7.1E-55 T 11-10-2018 DB34_05830 a01a5b1274c559f359c691533228cead 313 Gene3D G3DSA:3.40.190.10 164 269 7.1E-55 T 11-10-2018 DB34_04395 0a57760f714ab1a4bd2634f538f72689 348 Gene3D G3DSA:3.30.420.40 155 322 2.8E-130 T 11-10-2018 DB34_04395 0a57760f714ab1a4bd2634f538f72689 348 Gene3D G3DSA:3.90.640.10 187 264 2.8E-130 T 11-10-2018 DB34_04395 0a57760f714ab1a4bd2634f538f72689 348 Gene3D G3DSA:3.30.420.40 13 332 2.8E-130 T 11-10-2018 DB34_04395 0a57760f714ab1a4bd2634f538f72689 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 188 208 6.2E-60 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DB34_04395 0a57760f714ab1a4bd2634f538f72689 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 133 152 6.2E-60 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DB34_04395 0a57760f714ab1a4bd2634f538f72689 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 305 331 6.2E-60 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DB34_04395 0a57760f714ab1a4bd2634f538f72689 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 70 93 6.2E-60 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DB34_04395 0a57760f714ab1a4bd2634f538f72689 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 50 68 6.2E-60 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DB34_04395 0a57760f714ab1a4bd2634f538f72689 348 Pfam PF06723 MreB/Mbl protein 11 340 1.9E-149 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DB34_04395 0a57760f714ab1a4bd2634f538f72689 348 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 10 341 9.1E-154 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DB34_04395 0a57760f714ab1a4bd2634f538f72689 348 SUPERFAMILY SSF53067 150 334 1.67E-46 T 11-10-2018 DB34_04395 0a57760f714ab1a4bd2634f538f72689 348 SUPERFAMILY SSF53067 10 149 3.89E-40 T 11-10-2018 DB34_03510 74db378b3e1c1807089a6e6310665468 104 Gene3D G3DSA:3.10.20.30 2 104 1.3E-41 T 11-10-2018 IPR012675 Beta-grasp domain superfamily DB34_03510 74db378b3e1c1807089a6e6310665468 104 PRINTS PR00355 Adrenodoxin signature 81 89 6.2E-11 T 11-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 DB34_03510 74db378b3e1c1807089a6e6310665468 104 PRINTS PR00355 Adrenodoxin signature 58 72 6.2E-11 T 11-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 DB34_03510 74db378b3e1c1807089a6e6310665468 104 PRINTS PR00355 Adrenodoxin signature 39 49 6.2E-11 T 11-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 DB34_03510 74db378b3e1c1807089a6e6310665468 104 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 8 90 3.0E-14 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 DB34_03510 74db378b3e1c1807089a6e6310665468 104 SUPERFAMILY SSF54292 3 101 1.62E-32 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 DB34_03510 74db378b3e1c1807089a6e6310665468 104 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 39 49 - T 11-10-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 DB34_12250 906934a8b2528ba3ecc7adf2c91cb9a6 160 Pfam PF00255 Glutathione peroxidase 4 110 6.8E-33 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 DB34_12250 906934a8b2528ba3ecc7adf2c91cb9a6 160 Gene3D G3DSA:3.40.30.10 2 160 3.2E-51 T 11-10-2018 DB34_12250 906934a8b2528ba3ecc7adf2c91cb9a6 160 ProSitePatterns PS00460 Glutathione peroxidases active site. 24 39 - T 11-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 DB34_12250 906934a8b2528ba3ecc7adf2c91cb9a6 160 PIRSF PIRSF000303 1 160 1.5E-57 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 DB34_12250 906934a8b2528ba3ecc7adf2c91cb9a6 160 PRINTS PR01011 Glutathione peroxidase family signature 22 39 1.6E-14 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 DB34_12250 906934a8b2528ba3ecc7adf2c91cb9a6 160 PRINTS PR01011 Glutathione peroxidase family signature 120 129 1.6E-14 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 DB34_12250 906934a8b2528ba3ecc7adf2c91cb9a6 160 PRINTS PR01011 Glutathione peroxidase family signature 57 73 1.6E-14 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 DB34_12250 906934a8b2528ba3ecc7adf2c91cb9a6 160 SUPERFAMILY SSF52833 4 158 5.87E-51 T 11-10-2018 IPR036249 Thioredoxin-like superfamily DB34_01305 1fc7372fe4aef448ca1c0abf27303305 422 PRINTS PR00981 Seryl-tRNA synthetase signature 262 274 4.7E-29 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DB34_01305 1fc7372fe4aef448ca1c0abf27303305 422 PRINTS PR00981 Seryl-tRNA synthetase signature 314 327 4.7E-29 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DB34_01305 1fc7372fe4aef448ca1c0abf27303305 422 PRINTS PR00981 Seryl-tRNA synthetase signature 331 347 4.7E-29 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DB34_01305 1fc7372fe4aef448ca1c0abf27303305 422 PRINTS PR00981 Seryl-tRNA synthetase signature 349 365 4.7E-29 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DB34_01305 1fc7372fe4aef448ca1c0abf27303305 422 PRINTS PR00981 Seryl-tRNA synthetase signature 274 287 4.7E-29 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DB34_01305 1fc7372fe4aef448ca1c0abf27303305 422 PIRSF PIRSF001529 1 422 1.9E-152 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DB34_01305 1fc7372fe4aef448ca1c0abf27303305 422 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 420 37.852 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DB34_01305 1fc7372fe4aef448ca1c0abf27303305 422 SUPERFAMILY SSF46589 1 112 4.45E-22 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 DB34_01305 1fc7372fe4aef448ca1c0abf27303305 422 SUPERFAMILY SSF55681 116 419 6.73E-92 T 11-10-2018 DB34_01305 1fc7372fe4aef448ca1c0abf27303305 422 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 105 1.6E-20 T 11-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 DB34_01305 1fc7372fe4aef448ca1c0abf27303305 422 Gene3D G3DSA:1.10.287.40 1 104 1.0E-16 T 11-10-2018 DB34_01305 1fc7372fe4aef448ca1c0abf27303305 422 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 415 1.9E-146 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DB34_01305 1fc7372fe4aef448ca1c0abf27303305 422 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 222 398 9.0E-29 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB34_01305 1fc7372fe4aef448ca1c0abf27303305 422 Gene3D G3DSA:3.30.930.10 105 422 6.3E-114 T 11-10-2018 DB34_09425 883bee4d6731ea9fc13cb38c59ff9034 156 Gene3D G3DSA:3.90.1170.40 1 148 3.6E-40 T 11-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 DB34_09425 883bee4d6731ea9fc13cb38c59ff9034 156 Pfam PF02391 MoaE protein 9 117 7.6E-27 T 11-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 DB34_09425 883bee4d6731ea9fc13cb38c59ff9034 156 SUPERFAMILY SSF54690 5 148 1.44E-40 T 11-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 DB34_08375 22ee7d601375446bd3fd9297b8f76282 772 SMART SM00044 559 753 2.7E-4 T 11-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 DB34_08375 22ee7d601375446bd3fd9297b8f76282 772 Gene3D G3DSA:3.30.70.1230 590 772 2.4E-20 T 11-10-2018 IPR029787 Nucleotide cyclase DB34_08375 22ee7d601375446bd3fd9297b8f76282 772 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 612 755 8.0E-17 T 11-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 DB34_08375 22ee7d601375446bd3fd9297b8f76282 772 SUPERFAMILY SSF103190 140 239 3.77E-6 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily DB34_08375 22ee7d601375446bd3fd9297b8f76282 772 Gene3D G3DSA:3.30.450.40 406 554 1.4E-6 T 11-10-2018 IPR029016 GAF-like domain superfamily DB34_08375 22ee7d601375446bd3fd9297b8f76282 772 SUPERFAMILY SSF55073 612 758 4.4E-19 T 11-10-2018 IPR029787 Nucleotide cyclase DB34_08375 22ee7d601375446bd3fd9297b8f76282 772 Gene3D G3DSA:3.30.450.20 129 229 4.7E-12 T 11-10-2018 DB34_08375 22ee7d601375446bd3fd9297b8f76282 772 SUPERFAMILY SSF55781 414 541 6.28E-7 T 11-10-2018 DB34_08375 22ee7d601375446bd3fd9297b8f76282 772 Pfam PF02743 Cache domain 112 328 2.0E-18 T 11-10-2018 IPR033479 Double Cache domain 1 DB34_13190 23eddae984f9c27b9d75de5d5eb572ec 133 Gene3D G3DSA:2.40.10.180 13 119 3.4E-5 T 11-10-2018 DB34_02525 48ce0eeec45a1b41e68996c4774a1c78 155 Gene3D G3DSA:3.30.160.750 102 155 2.9E-19 T 11-10-2018 DB34_02525 48ce0eeec45a1b41e68996c4774a1c78 155 SUPERFAMILY SSF56276 43 153 1.69E-34 T 11-10-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 DB34_02525 48ce0eeec45a1b41e68996c4774a1c78 155 TIGRFAM TIGR03330 SAM_DCase_Bsu: S-adenosylmethionine decarboxylase proenzyme 43 151 3.5E-41 T 11-10-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 DB34_02525 48ce0eeec45a1b41e68996c4774a1c78 155 Hamap MF_00464 S-adenosylmethionine decarboxylase proenzyme [speH]. 41 155 25.209 T 11-10-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 DB34_02525 48ce0eeec45a1b41e68996c4774a1c78 155 Gene3D G3DSA:3.30.360.110 42 101 1.5E-21 T 11-10-2018 DB34_02525 48ce0eeec45a1b41e68996c4774a1c78 155 Pfam PF02675 S-adenosylmethionine decarboxylase 47 151 6.7E-35 T 11-10-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 DB34_12320 661d8148c245b8b93a68ecc80dea1988 442 SMART SM00928 331 376 1.3E-24 T 11-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_12320 661d8148c245b8b93a68ecc80dea1988 442 Gene3D G3DSA:3.40.50.11540 52 231 3.1E-81 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_12320 661d8148c245b8b93a68ecc80dea1988 442 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 8 417 4.2E-193 T 11-10-2018 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_12320 661d8148c245b8b93a68ecc80dea1988 442 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 333 415 3.4E-31 T 11-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_12320 661d8148c245b8b93a68ecc80dea1988 442 SUPERFAMILY SSF142984 241 326 9.55E-23 T 11-10-2018 DB34_12320 661d8148c245b8b93a68ecc80dea1988 442 SUPERFAMILY SSF142019 3 240 1.57E-83 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_12320 661d8148c245b8b93a68ecc80dea1988 442 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 47 216 1.2E-49 T 11-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_12320 661d8148c245b8b93a68ecc80dea1988 442 SUPERFAMILY SSF140490 327 421 4.97E-37 T 11-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_12320 661d8148c245b8b93a68ecc80dea1988 442 Gene3D G3DSA:1.20.1440.230 329 429 1.3E-39 T 11-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_12320 661d8148c245b8b93a68ecc80dea1988 442 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 167 182 - T 11-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_12320 661d8148c245b8b93a68ecc80dea1988 442 Gene3D G3DSA:3.10.20.600 232 328 3.8E-39 T 11-10-2018 DB34_12320 661d8148c245b8b93a68ecc80dea1988 442 Pfam PF10531 SLBB domain 245 293 3.3E-7 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_12320 661d8148c245b8b93a68ecc80dea1988 442 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 344 355 - T 11-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_10445 357c9c34616f9d3e5a705fbcbe339081 169 Pfam PF09349 OHCU decarboxylase 8 164 6.2E-48 T 11-10-2018 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 DB34_10445 357c9c34616f9d3e5a705fbcbe339081 169 Gene3D G3DSA:1.10.3330.10 2 169 3.6E-61 T 11-10-2018 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 DB34_10445 357c9c34616f9d3e5a705fbcbe339081 169 SUPERFAMILY SSF158694 4 166 8.11E-53 T 11-10-2018 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 DB34_10445 357c9c34616f9d3e5a705fbcbe339081 169 TIGRFAM TIGR03164 UHCUDC: OHCU decarboxylase 12 165 2.7E-56 T 11-10-2018 IPR017580 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1 GO:0019428 KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 DB34_03310 2c3bb01190ae64605918b86554f52d12 529 Gene3D G3DSA:1.20.1600.10 79 515 1.2E-128 T 11-10-2018 DB34_03310 2c3bb01190ae64605918b86554f52d12 529 Pfam PF02321 Outer membrane efflux protein 92 302 1.6E-24 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DB34_03310 2c3bb01190ae64605918b86554f52d12 529 Pfam PF02321 Outer membrane efflux protein 331 512 7.1E-27 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DB34_03310 2c3bb01190ae64605918b86554f52d12 529 Gene3D G3DSA:2.20.200.10 126 403 1.2E-128 T 11-10-2018 DB34_03310 2c3bb01190ae64605918b86554f52d12 529 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 31 514 2.5E-112 T 11-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 DB34_03310 2c3bb01190ae64605918b86554f52d12 529 SUPERFAMILY SSF56954 25 517 2.22E-103 T 11-10-2018 DB34_08880 e091f62616b21ec728ca2339fb3c0ca3 170 SUPERFAMILY SSF55811 8 164 5.82E-28 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DB34_08880 e091f62616b21ec728ca2339fb3c0ca3 170 Pfam PF00293 NUDIX domain 11 158 1.9E-23 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DB34_08880 e091f62616b21ec728ca2339fb3c0ca3 170 PRINTS PR00502 NUDIX hydrolase family signature 46 60 4.9E-5 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 DB34_08880 e091f62616b21ec728ca2339fb3c0ca3 170 PRINTS PR00502 NUDIX hydrolase family signature 60 75 4.9E-5 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 DB34_08880 e091f62616b21ec728ca2339fb3c0ca3 170 Gene3D G3DSA:3.90.79.10 8 168 9.5E-42 T 11-10-2018 DB34_08880 e091f62616b21ec728ca2339fb3c0ca3 170 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 5 167 33.581 T 11-10-2018 IPR022927 RNA pyrophosphohydrolase RppH DB34_08880 e091f62616b21ec728ca2339fb3c0ca3 170 ProSitePatterns PS00893 Nudix box signature. 51 72 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 DB34_04285 5cf9bcafa8838aff098a5375c4da9210 133 Pfam PF02152 Dihydroneopterin aldolase 16 127 1.2E-25 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 DB34_04285 5cf9bcafa8838aff098a5375c4da9210 133 SMART SM00905 16 128 1.7E-28 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 DB34_04285 5cf9bcafa8838aff098a5375c4da9210 133 TIGRFAM TIGR00526 folB_dom: FolB domain 15 130 3.7E-21 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 DB34_04285 5cf9bcafa8838aff098a5375c4da9210 133 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 15 128 2.7E-23 T 11-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 DB34_04285 5cf9bcafa8838aff098a5375c4da9210 133 Gene3D G3DSA:3.30.1130.10 2 132 3.1E-42 T 11-10-2018 DB34_04285 5cf9bcafa8838aff098a5375c4da9210 133 SUPERFAMILY SSF55620 13 129 2.72E-26 T 11-10-2018 DB34_07485 613879f1fa7cfb701404702342aab8d0 312 Gene3D G3DSA:3.10.25.10 203 308 1.4E-29 T 11-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DB34_07485 613879f1fa7cfb701404702342aab8d0 312 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 1 296 2.9E-86 T 11-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 DB34_07485 613879f1fa7cfb701404702342aab8d0 312 SUPERFAMILY SSF50486 201 304 1.73E-29 T 11-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 DB34_07485 613879f1fa7cfb701404702342aab8d0 312 Gene3D G3DSA:3.40.50.170 1 202 2.0E-74 T 11-10-2018 DB34_07485 613879f1fa7cfb701404702342aab8d0 312 Pfam PF02911 Formyl transferase, C-terminal domain 201 296 2.8E-25 T 11-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DB34_07485 613879f1fa7cfb701404702342aab8d0 312 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 133 156 - T 11-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DB34_07485 613879f1fa7cfb701404702342aab8d0 312 SUPERFAMILY SSF53328 1 202 9.16E-61 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DB34_07485 613879f1fa7cfb701404702342aab8d0 312 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 1 299 35.949 T 11-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 DB34_07485 613879f1fa7cfb701404702342aab8d0 312 Pfam PF00551 Formyl transferase 1 179 4.0E-42 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DB34_04125 8954c5dd01929ae840659e9415bf8ae8 362 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 16 90 3.9E-17 T 11-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 DB34_04125 8954c5dd01929ae840659e9415bf8ae8 362 Pfam PF01381 Helix-turn-helix 22 74 1.4E-10 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DB34_04125 8954c5dd01929ae840659e9415bf8ae8 362 Pfam PF06114 IrrE N-terminal-like domain 253 329 1.4E-9 T 11-10-2018 IPR010359 IrrE N-terminal-like domain DB34_04125 8954c5dd01929ae840659e9415bf8ae8 362 Gene3D G3DSA:1.10.260.40 13 106 5.8E-25 T 11-10-2018 DB34_04125 8954c5dd01929ae840659e9415bf8ae8 362 SUPERFAMILY SSF47413 17 97 1.35E-21 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DB34_04125 8954c5dd01929ae840659e9415bf8ae8 362 SMART SM00530 21 76 2.1E-10 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DB34_01885 f1dddedc3034772e65fb201dcbc49bbd 453 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 7 183 3.3E-13 T 11-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain DB34_01885 f1dddedc3034772e65fb201dcbc49bbd 453 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 252 441 5.9E-30 T 11-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 DB34_01885 f1dddedc3034772e65fb201dcbc49bbd 453 Gene3D G3DSA:3.40.50.300 5 192 1.3E-20 T 11-10-2018 DB34_01885 f1dddedc3034772e65fb201dcbc49bbd 453 SUPERFAMILY SSF52317 251 440 1.99E-24 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like DB34_01885 f1dddedc3034772e65fb201dcbc49bbd 453 SUPERFAMILY SSF52540 5 200 1.42E-38 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_01885 f1dddedc3034772e65fb201dcbc49bbd 453 TIGRFAM TIGR00379 cobB: cobyrinic acid a,c-diamide synthase 7 442 3.3E-91 T 11-10-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 DB34_01885 f1dddedc3034772e65fb201dcbc49bbd 453 Gene3D G3DSA:3.40.50.880 260 445 7.2E-7 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like DB34_01885 f1dddedc3034772e65fb201dcbc49bbd 453 Hamap MF_00027 Hydrogenobyrinate a,c-diamide synthase [cobB]. 4 444 38.463 T 11-10-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 DB34_04625 6c0fa15c30fda5d840d27d2805c34ace 136 SUPERFAMILY SSF51344 2 83 1.19E-18 T 11-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB34_04625 6c0fa15c30fda5d840d27d2805c34ace 136 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 8 88 8.0E-18 T 11-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB34_04625 6c0fa15c30fda5d840d27d2805c34ace 136 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 3 82 1.1E-19 T 11-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB34_04625 6c0fa15c30fda5d840d27d2805c34ace 136 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 1 131 16.309 T 11-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB34_04625 6c0fa15c30fda5d840d27d2805c34ace 136 Gene3D G3DSA:2.60.15.10 2 130 8.4E-28 T 11-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB34_04625 6c0fa15c30fda5d840d27d2805c34ace 136 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 3 131 6.9E-22 T 11-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB34_09590 f91f37da7ea0340f1edf41b778692fb8 88 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 82 4.8E-29 T 11-10-2018 IPR011900 Glutaredoxin, GrxC GO:0045454 DB34_09590 f91f37da7ea0340f1edf41b778692fb8 88 SUPERFAMILY SSF52833 2 84 1.73E-23 T 11-10-2018 IPR036249 Thioredoxin-like superfamily DB34_09590 f91f37da7ea0340f1edf41b778692fb8 88 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 11-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 DB34_09590 f91f37da7ea0340f1edf41b778692fb8 88 Pfam PF00462 Glutaredoxin 4 63 9.1E-17 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 DB34_09590 f91f37da7ea0340f1edf41b778692fb8 88 PRINTS PR00160 Glutaredoxin signature 47 60 3.7E-14 T 11-10-2018 IPR014025 Glutaredoxin subgroup DB34_09590 f91f37da7ea0340f1edf41b778692fb8 88 PRINTS PR00160 Glutaredoxin signature 61 74 3.7E-14 T 11-10-2018 IPR014025 Glutaredoxin subgroup DB34_09590 f91f37da7ea0340f1edf41b778692fb8 88 PRINTS PR00160 Glutaredoxin signature 4 22 3.7E-14 T 11-10-2018 IPR014025 Glutaredoxin subgroup DB34_09590 f91f37da7ea0340f1edf41b778692fb8 88 Gene3D G3DSA:3.40.30.10 1 84 3.8E-24 T 11-10-2018 DB34_09760 05faed238ea2365b5600d9711edc2bdb 182 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 7 147 1.8E-17 T 11-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 DB34_09760 05faed238ea2365b5600d9711edc2bdb 182 SUPERFAMILY SSF55620 7 147 2.72E-18 T 11-10-2018 DB34_09760 05faed238ea2365b5600d9711edc2bdb 182 Gene3D G3DSA:3.30.479.10 5 153 5.9E-17 T 11-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 DB34_02410 37c4ca5d4cde0ef329cbcc5c326dfb5f 345 SUPERFAMILY SSF144052 147 342 4.71E-7 T 11-10-2018 DB34_03950 6be81978fb7c7a3045ee2032a2b1146a 466 SMART SM00885 36 176 2.2E-36 T 11-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal DB34_03950 6be81978fb7c7a3045ee2032a2b1146a 466 TIGRFAM TIGR01613 primase_Cterm: phage/plasmid primase, P4 family, C-terminal domain 126 424 2.0E-86 T 11-10-2018 IPR006500 DNA primase, phage/plasmid DB34_03950 6be81978fb7c7a3045ee2032a2b1146a 466 Pfam PF08706 D5 N terminal like 36 174 3.3E-26 T 11-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal DB34_03950 6be81978fb7c7a3045ee2032a2b1146a 466 SUPERFAMILY SSF52540 162 352 6.37E-7 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_03950 6be81978fb7c7a3045ee2032a2b1146a 466 Gene3D G3DSA:3.40.50.300 157 361 2.5E-6 T 11-10-2018 DB34_07570 764d7aac7457cbbeb3f2607ab9e673ab 394 Pfam PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) 52 379 1.0E-60 T 11-10-2018 DB34_07570 764d7aac7457cbbeb3f2607ab9e673ab 394 SUPERFAMILY SSF48208 17 388 1.04E-76 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 DB34_07570 764d7aac7457cbbeb3f2607ab9e673ab 394 Gene3D G3DSA:1.50.10.10 8 388 1.1E-72 T 11-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 DB34_08335 9d7d66e2a6d071789bdeadb02a739e46 595 Pfam PF07940 Heparinase II/III-like protein 301 512 9.0E-41 T 11-10-2018 IPR012480 Heparinase II/III-like GO:0016829 DB34_08335 9d7d66e2a6d071789bdeadb02a739e46 595 Gene3D G3DSA:1.50.10.100 35 294 3.8E-23 T 11-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 DB34_10955 d210d1483efa68f5eff956cc5cd712ee 178 SMART SM00886 65 177 1.5E-21 T 11-10-2018 IPR013097 Stress responsive alpha-beta barrel DB34_10955 d210d1483efa68f5eff956cc5cd712ee 178 Gene3D G3DSA:3.30.70.100 58 177 1.7E-29 T 11-10-2018 DB34_10955 d210d1483efa68f5eff956cc5cd712ee 178 SUPERFAMILY SSF54909 65 177 7.15E-18 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel DB34_10955 d210d1483efa68f5eff956cc5cd712ee 178 Pfam PF07876 Stress responsive A/B Barrel Domain 65 177 1.9E-23 T 11-10-2018 IPR013097 Stress responsive alpha-beta barrel DB34_10410 bcfa35036d97775549f53f887ae20d06 271 TIGRFAM TIGR02964 xanthine_xdhC: xanthine dehydrogenase accessory protein XdhC 19 262 7.5E-82 T 11-10-2018 IPR014308 Xanthine dehydrogenase accessory protein XdhC DB34_10410 bcfa35036d97775549f53f887ae20d06 271 Gene3D G3DSA:3.40.50.720 120 266 1.5E-26 T 11-10-2018 DB34_10410 bcfa35036d97775549f53f887ae20d06 271 Pfam PF02625 XdhC and CoxI family 11 70 1.0E-13 T 11-10-2018 IPR003777 XdhC- CoxI DB34_10410 bcfa35036d97775549f53f887ae20d06 271 Pfam PF13478 XdhC Rossmann domain 121 262 4.0E-28 T 11-10-2018 IPR027051 XdhC Rossmann domain DB34_08035 6b2432041373d39cd073dc27ac3b797f 229 Hamap MF_00664 Phosphatidylserine decarboxylase proenzyme [psd]. 13 229 34.224 T 11-10-2018 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 DB34_08035 6b2432041373d39cd073dc27ac3b797f 229 Pfam PF02666 Phosphatidylserine decarboxylase 56 226 1.4E-32 T 11-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 DB34_08035 6b2432041373d39cd073dc27ac3b797f 229 TIGRFAM TIGR00164 PS_decarb_rel: phosphatidylserine decarboxylase homolog 51 228 1.1E-54 T 11-10-2018 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 DB34_12520 ceaea58e13b05f49bb25159698d26c13 466 Pfam PF14821 Threonine synthase N terminus 2 80 4.5E-26 T 11-10-2018 IPR029144 Threonine synthase, N-terminal DB34_12520 ceaea58e13b05f49bb25159698d26c13 466 SUPERFAMILY SSF53686 1 459 1.17E-160 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DB34_12520 ceaea58e13b05f49bb25159698d26c13 466 TIGRFAM TIGR00260 thrC: threonine synthase 72 425 1.5E-84 T 11-10-2018 IPR004450 Threonine synthase-like DB34_12520 ceaea58e13b05f49bb25159698d26c13 466 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 93 396 7.2E-23 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme DB34_12520 ceaea58e13b05f49bb25159698d26c13 466 Gene3D G3DSA:3.40.50.1100 108 442 1.3E-146 T 11-10-2018 DB34_12520 ceaea58e13b05f49bb25159698d26c13 466 Gene3D G3DSA:3.90.1380.10 1 86 1.1E-29 T 11-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily DB34_12520 ceaea58e13b05f49bb25159698d26c13 466 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 102 116 - T 11-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 DB34_12520 ceaea58e13b05f49bb25159698d26c13 466 Gene3D G3DSA:3.40.50.1100 96 429 1.3E-146 T 11-10-2018 DB34_07625 70d774ccce23bb4a74eef862a9650df3 203 Pfam PF13586 Transposase DDE domain 118 202 9.0E-16 T 11-10-2018 IPR025668 Transposase DDE domain DB34_12085 70d774ccce23bb4a74eef862a9650df3 203 Pfam PF13586 Transposase DDE domain 118 202 9.0E-16 T 11-10-2018 IPR025668 Transposase DDE domain DB34_13550 70d774ccce23bb4a74eef862a9650df3 203 Pfam PF13586 Transposase DDE domain 118 202 9.0E-16 T 11-10-2018 IPR025668 Transposase DDE domain DB34_11685 70d774ccce23bb4a74eef862a9650df3 203 Pfam PF13586 Transposase DDE domain 118 202 9.0E-16 T 11-10-2018 IPR025668 Transposase DDE domain DB34_13705 70d774ccce23bb4a74eef862a9650df3 203 Pfam PF13586 Transposase DDE domain 118 202 9.0E-16 T 11-10-2018 IPR025668 Transposase DDE domain DB34_10795 70d774ccce23bb4a74eef862a9650df3 203 Pfam PF13586 Transposase DDE domain 118 202 9.0E-16 T 11-10-2018 IPR025668 Transposase DDE domain DB34_13590 70d774ccce23bb4a74eef862a9650df3 203 Pfam PF13586 Transposase DDE domain 118 202 9.0E-16 T 11-10-2018 IPR025668 Transposase DDE domain DB34_02475 91f08db3cc7663ba7b535e14e402a1be 223 Gene3D G3DSA:3.60.15.10 8 223 5.1E-68 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DB34_02475 91f08db3cc7663ba7b535e14e402a1be 223 SMART SM00849 19 205 2.9E-31 T 11-10-2018 IPR001279 Metallo-beta-lactamase DB34_02475 91f08db3cc7663ba7b535e14e402a1be 223 Pfam PF00753 Metallo-beta-lactamase superfamily 16 205 9.6E-26 T 11-10-2018 IPR001279 Metallo-beta-lactamase DB34_02475 91f08db3cc7663ba7b535e14e402a1be 223 SUPERFAMILY SSF56281 8 222 5.77E-49 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DB34_10095 5d94e17603791e1f3fc9390581de99b5 639 Gene3D G3DSA:3.10.50.40 272 359 5.6E-8 T 11-10-2018 DB34_10095 5d94e17603791e1f3fc9390581de99b5 639 Pfam PF13145 PPIC-type PPIASE domain 253 370 5.5E-19 T 11-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 DB34_10095 5d94e17603791e1f3fc9390581de99b5 639 SUPERFAMILY SSF109998 43 295 5.49E-21 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily DB34_10095 5d94e17603791e1f3fc9390581de99b5 639 Gene3D G3DSA:1.10.4030.30 44 188 4.3E-9 T 11-10-2018 DB34_10095 5d94e17603791e1f3fc9390581de99b5 639 SUPERFAMILY SSF54534 228 356 8.5E-7 T 11-10-2018 DB34_10095 5d94e17603791e1f3fc9390581de99b5 639 Pfam PF13624 SurA N-terminal domain 1 168 6.0E-34 T 11-10-2018 DB34_10095 5d94e17603791e1f3fc9390581de99b5 639 Gene3D G3DSA:1.10.4030.30 244 369 5.6E-8 T 11-10-2018 DB34_08740 b59fca6dd4b1ec4c6e0b2b568f10b09d 222 SUPERFAMILY SSF57774 126 163 1.14E-12 T 11-10-2018 IPR036193 Adenylate kinase, active site lid domain superfamily GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 DB34_08740 b59fca6dd4b1ec4c6e0b2b568f10b09d 222 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 11-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 DB34_08740 b59fca6dd4b1ec4c6e0b2b568f10b09d 222 TIGRFAM TIGR01351 adk: adenylate kinase 2 213 5.2E-78 T 11-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 DB34_08740 b59fca6dd4b1ec4c6e0b2b568f10b09d 222 Hamap MF_00235 Adenylate kinase [adk]. 1 214 49.493 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 DB34_08740 b59fca6dd4b1ec4c6e0b2b568f10b09d 222 SUPERFAMILY SSF52540 1 214 7.95E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_08740 b59fca6dd4b1ec4c6e0b2b568f10b09d 222 Gene3D G3DSA:3.40.50.300 1 217 5.0E-80 T 11-10-2018 DB34_08740 b59fca6dd4b1ec4c6e0b2b568f10b09d 222 PRINTS PR00094 Adenylate kinase signature 81 97 2.6E-33 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 DB34_08740 b59fca6dd4b1ec4c6e0b2b568f10b09d 222 PRINTS PR00094 Adenylate kinase signature 32 46 2.6E-33 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 DB34_08740 b59fca6dd4b1ec4c6e0b2b568f10b09d 222 PRINTS PR00094 Adenylate kinase signature 4 17 2.6E-33 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 DB34_08740 b59fca6dd4b1ec4c6e0b2b568f10b09d 222 PRINTS PR00094 Adenylate kinase signature 161 176 2.6E-33 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 DB34_08740 b59fca6dd4b1ec4c6e0b2b568f10b09d 222 PRINTS PR00094 Adenylate kinase signature 178 192 2.6E-33 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 DB34_08740 b59fca6dd4b1ec4c6e0b2b568f10b09d 222 Pfam PF00406 Adenylate kinase 6 191 2.8E-58 T 11-10-2018 DB34_08740 b59fca6dd4b1ec4c6e0b2b568f10b09d 222 Pfam PF05191 Adenylate kinase, active site lid 127 163 1.4E-12 T 11-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 DB34_11400 6ffcd5991d085cb07e658f3f0c765fef 213 SMART SM01252 12 110 2.6E-14 T 11-10-2018 IPR018004 KilA, N-terminal/APSES-type HTH, DNA-binding DB34_11400 6ffcd5991d085cb07e658f3f0c765fef 213 Pfam PF04383 KilA-N domain 21 106 1.9E-13 T 11-10-2018 IPR018004 KilA, N-terminal/APSES-type HTH, DNA-binding DB34_04890 592d66c6bc5c103ac653b34041074486 229 SUPERFAMILY SSF48452 70 208 4.75E-16 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB34_04890 592d66c6bc5c103ac653b34041074486 229 Gene3D G3DSA:1.25.40.10 53 225 1.2E-16 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB34_04890 592d66c6bc5c103ac653b34041074486 229 SMART SM00028 177 210 0.8 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB34_04890 592d66c6bc5c103ac653b34041074486 229 SMART SM00028 143 176 15.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB34_04890 592d66c6bc5c103ac653b34041074486 229 SMART SM00028 109 142 110.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB34_04890 592d66c6bc5c103ac653b34041074486 229 Pfam PF13432 Tetratricopeptide repeat 124 171 5.2E-5 T 11-10-2018 DB34_01865 c6e98b3382e027b22a6e1814655b0cc2 212 Gene3D G3DSA:3.40.109.10 2 189 7.1E-43 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DB34_01865 c6e98b3382e027b22a6e1814655b0cc2 212 SUPERFAMILY SSF55469 6 202 1.83E-41 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DB34_01865 c6e98b3382e027b22a6e1814655b0cc2 212 TIGRFAM TIGR02476 BluB: 5,6-dimethylbenzimidazole synthase 6 206 1.5E-72 T 11-10-2018 IPR012825 5,6-dimethylbenzimidazole synthase BluB KEGG: 00740+1.13.11.79|MetaCyc: PWY-5523 DB34_01865 c6e98b3382e027b22a6e1814655b0cc2 212 Pfam PF00881 Nitroreductase family 20 183 7.8E-26 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 DB34_03905 ce143ab3d38e47a9b74e9572c4aaf133 358 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 9 358 44.09 T 11-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 DB34_03905 ce143ab3d38e47a9b74e9572c4aaf133 358 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 25 34 - T 11-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 DB34_03905 ce143ab3d38e47a9b74e9572c4aaf133 358 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 8 356 1.3E-108 T 11-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 DB34_03905 ce143ab3d38e47a9b74e9572c4aaf133 358 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 153 169 - T 11-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 DB34_03905 ce143ab3d38e47a9b74e9572c4aaf133 358 SUPERFAMILY SSF51726 8 356 4.53E-93 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 DB34_03905 ce143ab3d38e47a9b74e9572c4aaf133 358 Gene3D G3DSA:3.20.20.210 2 358 3.6E-119 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 DB34_03905 ce143ab3d38e47a9b74e9572c4aaf133 358 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 12 356 4.5E-112 T 11-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 DB34_01195 66519a8f38a34f1f12788a24a86c0dc6 284 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 118 129 6.2E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_01195 66519a8f38a34f1f12788a24a86c0dc6 284 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 170 178 6.2E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_01195 66519a8f38a34f1f12788a24a86c0dc6 284 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 190 209 6.2E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_01195 66519a8f38a34f1f12788a24a86c0dc6 284 Gene3D G3DSA:3.40.50.720 2 282 1.1E-88 T 11-10-2018 DB34_01195 66519a8f38a34f1f12788a24a86c0dc6 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 228 6.5E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_01195 66519a8f38a34f1f12788a24a86c0dc6 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 180 6.5E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_01195 66519a8f38a34f1f12788a24a86c0dc6 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 118 129 6.5E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_01195 66519a8f38a34f1f12788a24a86c0dc6 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 245 265 6.5E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_01195 66519a8f38a34f1f12788a24a86c0dc6 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 43 60 6.5E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_01195 66519a8f38a34f1f12788a24a86c0dc6 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 190 209 6.5E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_01195 66519a8f38a34f1f12788a24a86c0dc6 284 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 177 205 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DB34_01195 66519a8f38a34f1f12788a24a86c0dc6 284 SUPERFAMILY SSF51735 41 282 1.66E-81 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily DB34_01195 66519a8f38a34f1f12788a24a86c0dc6 284 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 48 280 7.5E-63 T 11-10-2018 DB34_10020 d9ce73352b4cd59b61856f50f7f66bb7 657 Gene3D G3DSA:1.10.530.10 509 656 9.0E-41 T 11-10-2018 DB34_10020 d9ce73352b4cd59b61856f50f7f66bb7 657 SUPERFAMILY SSF53955 512 654 7.19E-38 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily DB34_10020 d9ce73352b4cd59b61856f50f7f66bb7 657 Gene3D G3DSA:1.25.40.10 132 398 8.8E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB34_10020 d9ce73352b4cd59b61856f50f7f66bb7 657 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 520 548 - T 11-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 DB34_10020 d9ce73352b4cd59b61856f50f7f66bb7 657 SUPERFAMILY SSF48435 61 493 3.01E-39 T 11-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 DB34_10020 d9ce73352b4cd59b61856f50f7f66bb7 657 Pfam PF01464 Transglycosylase SLT domain 515 617 7.6E-24 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 DB34_05285 e546b086fce7010783a745a5be88890a 202 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 18 202 28.898 T 11-10-2018 IPR003774 Protein of unknown function UPF0301 DB34_05285 e546b086fce7010783a745a5be88890a 202 SUPERFAMILY SSF143456 18 202 3.14E-49 T 11-10-2018 DB34_05285 e546b086fce7010783a745a5be88890a 202 Gene3D G3DSA:3.40.1740.10 16 202 1.1E-54 T 11-10-2018 DB34_05285 e546b086fce7010783a745a5be88890a 202 Pfam PF02622 Uncharacterized ACR, COG1678 29 187 4.8E-39 T 11-10-2018 IPR003774 Protein of unknown function UPF0301 DB34_10305 bb1c5d12af35dca6dd6afc36a6adaa65 249 SMART SM00448 127 237 7.5E-14 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB34_10305 bb1c5d12af35dca6dd6afc36a6adaa65 249 SUPERFAMILY SSF52172 128 243 1.99E-21 T 11-10-2018 IPR011006 CheY-like superfamily DB34_10305 bb1c5d12af35dca6dd6afc36a6adaa65 249 Gene3D G3DSA:1.20.140.160 1 124 3.9E-23 T 11-10-2018 DB34_10305 bb1c5d12af35dca6dd6afc36a6adaa65 249 Pfam PF00072 Response regulator receiver domain 129 233 1.1E-12 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB34_10305 bb1c5d12af35dca6dd6afc36a6adaa65 249 Gene3D G3DSA:3.40.50.2300 125 248 9.0E-26 T 11-10-2018 DB34_05730 d7e255c3df3de3af441a84094fe4775d 520 SUPERFAMILY SSF103378 18 478 5.49E-121 T 11-10-2018 IPR036148 MmgE/PrpD superfamily GO:0016829 DB34_05730 d7e255c3df3de3af441a84094fe4775d 520 Gene3D G3DSA:1.10.4100.10 45 466 2.8E-68 T 11-10-2018 DB34_05730 d7e255c3df3de3af441a84094fe4775d 520 Pfam PF03972 MmgE/PrpD family 19 473 2.9E-127 T 11-10-2018 IPR005656 MmgE/PrpD GO:0016829 DB34_05730 d7e255c3df3de3af441a84094fe4775d 520 Gene3D G3DSA:3.30.1330.120 284 430 2.8E-68 T 11-10-2018 DB34_01550 69440de818b625b9b4af67e82d1488bc 422 SUPERFAMILY SSF51395 3 320 1.17E-68 T 11-10-2018 DB34_01550 69440de818b625b9b4af67e82d1488bc 422 SUPERFAMILY SSF54862 335 411 4.51E-14 T 11-10-2018 DB34_01550 69440de818b625b9b4af67e82d1488bc 422 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 4 320 3.2E-51 T 11-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 DB34_01550 69440de818b625b9b4af67e82d1488bc 422 Gene3D G3DSA:3.20.20.70 4 307 1.6E-102 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB34_01550 69440de818b625b9b4af67e82d1488bc 422 Pfam PF14697 4Fe-4S dicluster domain 338 399 2.4E-23 T 11-10-2018 DB34_01550 69440de818b625b9b4af67e82d1488bc 422 Pfam PF01180 Dihydroorotate dehydrogenase 4 305 7.5E-26 T 11-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 DB34_01550 69440de818b625b9b4af67e82d1488bc 422 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 381 392 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DB34_01550 69440de818b625b9b4af67e82d1488bc 422 Gene3D G3DSA:3.30.70.20 308 415 7.8E-24 T 11-10-2018 DB34_05500 40391bbd830ecccc1b59c7110490d67b 434 SUPERFAMILY SSF111369 68 129 2.35E-5 T 11-10-2018 DB34_05500 40391bbd830ecccc1b59c7110490d67b 434 Gene3D G3DSA:2.40.30.170 295 406 2.7E-5 T 11-10-2018 DB34_05500 40391bbd830ecccc1b59c7110490d67b 434 Gene3D G3DSA:2.40.30.170 56 67 7.3E-7 T 11-10-2018 DB34_05500 40391bbd830ecccc1b59c7110490d67b 434 Gene3D G3DSA:1.10.287.470 102 136 7.3E-7 T 11-10-2018 DB34_05500 40391bbd830ecccc1b59c7110490d67b 434 Pfam PF13437 HlyD family secretion protein 264 351 8.0E-13 T 11-10-2018 DB34_05500 40391bbd830ecccc1b59c7110490d67b 434 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 308 332 1.6E-9 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DB34_05500 40391bbd830ecccc1b59c7110490d67b 434 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 275 296 1.6E-9 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DB34_05500 40391bbd830ecccc1b59c7110490d67b 434 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 80 100 1.6E-9 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DB34_05500 40391bbd830ecccc1b59c7110490d67b 434 Pfam PF13533 Biotin-lipoyl like 70 105 9.8E-6 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain DB34_05500 40391bbd830ecccc1b59c7110490d67b 434 Gene3D G3DSA:2.40.50.100 68 101 7.3E-7 T 11-10-2018 DB34_05500 40391bbd830ecccc1b59c7110490d67b 434 Gene3D G3DSA:2.40.50.100 208 293 1.4E-5 T 11-10-2018 DB34_07120 abfa4750595bc37da0acb5ebb4a2a022 464 SUPERFAMILY SSF81340 16 436 5.1E-90 T 11-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 DB34_07120 abfa4750595bc37da0acb5ebb4a2a022 464 Gene3D G3DSA:1.10.3080.10 30 440 1.1E-83 T 11-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 DB34_07120 abfa4750595bc37da0acb5ebb4a2a022 464 PRINTS PR00762 Chloride channel signature 88 105 3.0E-26 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 DB34_07120 abfa4750595bc37da0acb5ebb4a2a022 464 PRINTS PR00762 Chloride channel signature 122 141 3.0E-26 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 DB34_07120 abfa4750595bc37da0acb5ebb4a2a022 464 PRINTS PR00762 Chloride channel signature 174 193 3.0E-26 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 DB34_07120 abfa4750595bc37da0acb5ebb4a2a022 464 PRINTS PR00762 Chloride channel signature 370 386 3.0E-26 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 DB34_07120 abfa4750595bc37da0acb5ebb4a2a022 464 PRINTS PR00762 Chloride channel signature 388 407 3.0E-26 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 DB34_07120 abfa4750595bc37da0acb5ebb4a2a022 464 PRINTS PR00762 Chloride channel signature 341 361 3.0E-26 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 DB34_07120 abfa4750595bc37da0acb5ebb4a2a022 464 Pfam PF00654 Voltage gated chloride channel 75 420 1.2E-78 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 DB34_00495 7a3491615d9926930299e40dbfb0ffb2 442 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 1 442 25.066 T 11-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 DB34_00495 7a3491615d9926930299e40dbfb0ffb2 442 Gene3D G3DSA:1.10.10.350 354 441 1.5E-16 T 11-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 DB34_00495 7a3491615d9926930299e40dbfb0ffb2 442 SUPERFAMILY SSF52374 3 299 5.9E-87 T 11-10-2018 DB34_00495 7a3491615d9926930299e40dbfb0ffb2 442 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 7 18 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB34_00495 7a3491615d9926930299e40dbfb0ffb2 442 PRINTS PR00987 Glutamyl-tRNA synthetase signature 180 190 3.1E-20 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DB34_00495 7a3491615d9926930299e40dbfb0ffb2 442 PRINTS PR00987 Glutamyl-tRNA synthetase signature 4 16 3.1E-20 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DB34_00495 7a3491615d9926930299e40dbfb0ffb2 442 PRINTS PR00987 Glutamyl-tRNA synthetase signature 18 29 3.1E-20 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DB34_00495 7a3491615d9926930299e40dbfb0ffb2 442 PRINTS PR00987 Glutamyl-tRNA synthetase signature 196 204 3.1E-20 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DB34_00495 7a3491615d9926930299e40dbfb0ffb2 442 PRINTS PR00987 Glutamyl-tRNA synthetase signature 33 46 3.1E-20 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DB34_00495 7a3491615d9926930299e40dbfb0ffb2 442 SUPERFAMILY SSF48163 281 438 7.32E-28 T 11-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 DB34_00495 7a3491615d9926930299e40dbfb0ffb2 442 Gene3D G3DSA:3.40.50.620 1 316 7.8E-105 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DB34_00495 7a3491615d9926930299e40dbfb0ffb2 442 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 2 323 1.0E-93 T 11-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 DB34_00495 7a3491615d9926930299e40dbfb0ffb2 442 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 2 305 7.8E-69 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 DB34_02615 8a92877f892a37ce9396c7aadfaa9d23 1026 SUPERFAMILY SSF48452 33 125 1.59E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB34_02615 8a92877f892a37ce9396c7aadfaa9d23 1026 SUPERFAMILY SSF53448 365 592 1.5E-34 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB34_02615 8a92877f892a37ce9396c7aadfaa9d23 1026 Gene3D G3DSA:3.40.50.2000 848 1024 2.2E-10 T 11-10-2018 DB34_02615 8a92877f892a37ce9396c7aadfaa9d23 1026 Gene3D G3DSA:1.25.40.10 8 184 2.2E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB34_02615 8a92877f892a37ce9396c7aadfaa9d23 1026 Pfam PF13641 Glycosyltransferase like family 2 368 589 2.5E-15 T 11-10-2018 DB34_02615 8a92877f892a37ce9396c7aadfaa9d23 1026 SUPERFAMILY SSF53756 653 1011 1.82E-19 T 11-10-2018 DB34_02615 8a92877f892a37ce9396c7aadfaa9d23 1026 Gene3D G3DSA:3.90.550.10 353 593 7.2E-30 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB34_11945 f737db5369a23588463675300951e12a 812 Pfam PF07715 TonB-dependent Receptor Plug Domain 109 207 1.1E-15 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain DB34_11945 f737db5369a23588463675300951e12a 812 Pfam PF00593 TonB dependent receptor 344 808 6.9E-38 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel DB34_11945 f737db5369a23588463675300951e12a 812 Gene3D G3DSA:2.40.170.20 221 812 3.7E-95 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DB34_11945 f737db5369a23588463675300951e12a 812 Gene3D G3DSA:2.170.130.10 95 218 6.7E-32 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily DB34_11945 f737db5369a23588463675300951e12a 812 SUPERFAMILY SSF56935 73 811 2.62E-98 T 11-10-2018 DB34_00185 b3740ae6a4cb1dede71e1593408ce43f 257 Pfam PF02167 Cytochrome C1 family 34 252 1.9E-71 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 DB34_00185 b3740ae6a4cb1dede71e1593408ce43f 257 SUPERFAMILY SSF46626 27 217 2.47E-52 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DB34_00185 b3740ae6a4cb1dede71e1593408ce43f 257 PRINTS PR00603 Cytochrome C1 signature 180 199 9.8E-45 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 DB34_00185 b3740ae6a4cb1dede71e1593408ce43f 257 PRINTS PR00603 Cytochrome C1 signature 219 234 9.8E-45 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 DB34_00185 b3740ae6a4cb1dede71e1593408ce43f 257 PRINTS PR00603 Cytochrome C1 signature 32 51 9.8E-45 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 DB34_00185 b3740ae6a4cb1dede71e1593408ce43f 257 PRINTS PR00603 Cytochrome C1 signature 169 180 9.8E-45 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 DB34_00185 b3740ae6a4cb1dede71e1593408ce43f 257 PRINTS PR00603 Cytochrome C1 signature 200 219 9.8E-45 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 DB34_00185 b3740ae6a4cb1dede71e1593408ce43f 257 PRINTS PR00603 Cytochrome C1 signature 52 71 9.8E-45 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 DB34_00185 b3740ae6a4cb1dede71e1593408ce43f 257 PRINTS PR00603 Cytochrome C1 signature 97 117 9.8E-45 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 DB34_00185 b3740ae6a4cb1dede71e1593408ce43f 257 PRINTS PR00603 Cytochrome C1 signature 130 154 9.8E-45 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 DB34_00185 b3740ae6a4cb1dede71e1593408ce43f 257 Gene3D G3DSA:1.10.760.10 24 219 2.2E-67 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DB34_05360 7b7f59454eb63f149998a2b2dc90a114 686 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 237 252 1.3E-23 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DB34_05360 7b7f59454eb63f149998a2b2dc90a114 686 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 386 405 1.3E-23 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DB34_05360 7b7f59454eb63f149998a2b2dc90a114 686 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 310 326 1.3E-23 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DB34_05360 7b7f59454eb63f149998a2b2dc90a114 686 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 46 58 1.3E-23 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DB34_05360 7b7f59454eb63f149998a2b2dc90a114 686 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 5 18 1.3E-23 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DB34_05360 7b7f59454eb63f149998a2b2dc90a114 686 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 4 541 1.1E-175 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DB34_05360 7b7f59454eb63f149998a2b2dc90a114 686 Pfam PF05746 DALR anticodon binding domain 573 676 5.6E-9 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 DB34_05360 7b7f59454eb63f149998a2b2dc90a114 686 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 1 684 21.778 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DB34_05360 7b7f59454eb63f149998a2b2dc90a114 686 SUPERFAMILY SSF109604 335 483 1.26E-12 T 11-10-2018 DB34_05360 7b7f59454eb63f149998a2b2dc90a114 686 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 3 684 8.4E-156 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DB34_01570 55674096d43e9b45d9643c114c46fb03 466 SUPERFAMILY SSF51338 3 66 4.32E-11 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DB34_01570 55674096d43e9b45d9643c114c46fb03 466 SUPERFAMILY SSF51556 54 383 7.82E-110 T 11-10-2018 IPR032466 Metal-dependent hydrolase DB34_01570 55674096d43e9b45d9643c114c46fb03 466 Gene3D G3DSA:2.30.40.10 2 459 5.0E-191 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DB34_01570 55674096d43e9b45d9643c114c46fb03 466 Pfam PF01979 Amidohydrolase family 50 437 1.3E-30 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 DB34_01570 55674096d43e9b45d9643c114c46fb03 466 Gene3D G3DSA:3.20.20.140 54 424 5.0E-191 T 11-10-2018 DB34_01570 55674096d43e9b45d9643c114c46fb03 466 TIGRFAM TIGR02033 D-hydantoinase: dihydropyrimidinase 4 455 2.7E-180 T 11-10-2018 IPR011778 Hydantoinase/dihydropyrimidinase GO:0005737 Reactome: R-HSA-399956 DB34_01570 55674096d43e9b45d9643c114c46fb03 466 SUPERFAMILY SSF51338 347 457 1.09E-38 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DB34_01830 a70286a26f665107d08b486cc29e4a54 484 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 279 290 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 DB34_01830 a70286a26f665107d08b486cc29e4a54 484 SUPERFAMILY SSF53720 6 475 1.96E-153 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DB34_01830 a70286a26f665107d08b486cc29e4a54 484 Gene3D G3DSA:3.40.605.10 22 467 5.0E-155 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DB34_01830 a70286a26f665107d08b486cc29e4a54 484 Gene3D G3DSA:3.40.309.10 255 444 5.0E-155 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DB34_01830 a70286a26f665107d08b486cc29e4a54 484 Pfam PF00171 Aldehyde dehydrogenase family 16 473 8.7E-147 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DB34_12110 5dc84b2de33c882650f8bb48931f2991 250 Gene3D G3DSA:3.40.50.300 7 250 6.3E-74 T 11-10-2018 DB34_12110 5dc84b2de33c882650f8bb48931f2991 250 SMART SM00382 35 221 1.6E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_12110 5dc84b2de33c882650f8bb48931f2991 250 SUPERFAMILY SSF52540 10 243 7.43E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_12110 5dc84b2de33c882650f8bb48931f2991 250 Pfam PF00005 ABC transporter 26 173 9.7E-36 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB34_12110 5dc84b2de33c882650f8bb48931f2991 250 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB34_12110 5dc84b2de33c882650f8bb48931f2991 250 PIRSF PIRSF039085 7 249 1.4E-94 T 11-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 DB34_01005 9c84db0e5eabdfe31dde6728fe3eae18 285 SUPERFAMILY SSF51690 116 283 8.24E-55 T 11-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 DB34_01005 9c84db0e5eabdfe31dde6728fe3eae18 285 Gene3D G3DSA:3.20.20.70 119 274 1.8E-99 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB34_01005 9c84db0e5eabdfe31dde6728fe3eae18 285 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 16 283 2.3E-93 T 11-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 DB34_01005 9c84db0e5eabdfe31dde6728fe3eae18 285 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 116 283 1.1E-55 T 11-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 DB34_01005 9c84db0e5eabdfe31dde6728fe3eae18 285 Gene3D G3DSA:3.90.1170.20 18 283 1.8E-99 T 11-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 DB34_01005 9c84db0e5eabdfe31dde6728fe3eae18 285 PIRSF PIRSF006250 9 285 1.1E-90 T 11-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 DB34_01005 9c84db0e5eabdfe31dde6728fe3eae18 285 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 27 114 1.2E-24 T 11-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 DB34_01005 9c84db0e5eabdfe31dde6728fe3eae18 285 SUPERFAMILY SSF54675 4 115 3.02E-30 T 11-10-2018 DB34_04520 48ca4c7cc514b84acf3dbec2ef3657e0 676 SUPERFAMILY SSF51735 147 281 6.69E-6 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily DB34_04520 48ca4c7cc514b84acf3dbec2ef3657e0 676 Pfam PF02719 Polysaccharide biosynthesis protein 293 592 1.1E-105 T 11-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain DB34_04520 48ca4c7cc514b84acf3dbec2ef3657e0 676 SUPERFAMILY SSF51735 290 574 2.39E-52 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily DB34_04520 48ca4c7cc514b84acf3dbec2ef3657e0 676 Gene3D G3DSA:3.40.50.720 146 274 1.8E-17 T 11-10-2018 DB34_04520 48ca4c7cc514b84acf3dbec2ef3657e0 676 Pfam PF13727 CoA-binding domain 88 205 5.5E-6 T 11-10-2018 DB34_04520 48ca4c7cc514b84acf3dbec2ef3657e0 676 Gene3D G3DSA:3.40.50.720 289 627 1.4E-104 T 11-10-2018 DB34_06150 114ab63ff960afadcaeb20aa852a9720 401 SUPERFAMILY SSF50969 44 396 1.88E-70 T 11-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like DB34_06150 114ab63ff960afadcaeb20aa852a9720 401 Pfam PF06433 Methylamine dehydrogenase heavy chain (MADH) 66 391 8.4E-53 T 11-10-2018 IPR009451 Amine dehydrogenase heavy chain GO:0030058|GO:0042597|GO:0055114 KEGG: 00680+1.4.9.1|MetaCyc: PWY-6967 DB34_06150 114ab63ff960afadcaeb20aa852a9720 401 Gene3D G3DSA:2.130.10.10 22 397 1.9E-124 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 DB34_10900 d914364a6858427609936e0f712cfb56 214 SUPERFAMILY SSF52833 2 80 4.42E-17 T 11-10-2018 IPR036249 Thioredoxin-like superfamily DB34_10900 d914364a6858427609936e0f712cfb56 214 TIGRFAM TIGR02182 GRXB: glutaredoxin, GrxB family 3 209 7.6E-75 T 11-10-2018 IPR011901 Glutaredoxin-2 GO:0005829|GO:0097573 DB34_10900 d914364a6858427609936e0f712cfb56 214 SUPERFAMILY SSF47616 76 214 1.36E-35 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DB34_10900 d914364a6858427609936e0f712cfb56 214 Gene3D G3DSA:3.40.30.10 9 84 1.4E-31 T 11-10-2018 DB34_10900 d914364a6858427609936e0f712cfb56 214 ProSitePatterns PS00195 Glutaredoxin active site. 4 19 - T 11-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 DB34_10900 d914364a6858427609936e0f712cfb56 214 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 72 3.2E-12 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 DB34_10900 d914364a6858427609936e0f712cfb56 214 Gene3D G3DSA:1.20.1050.10 90 214 2.5E-33 T 11-10-2018 DB34_10900 d914364a6858427609936e0f712cfb56 214 Pfam PF04399 Glutaredoxin 2, C terminal domain 84 213 4.0E-39 T 11-10-2018 IPR007494 Glutaredoxin 2, C-terminal DB34_05745 35b3dcd5a4989fe82bb617daf9eb1f20 662 SUPERFAMILY SSF56801 8 645 3.66E-160 T 11-10-2018 DB34_05745 35b3dcd5a4989fe82bb617daf9eb1f20 662 Pfam PF00501 AMP-binding enzyme 86 522 9.6E-90 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 DB34_05745 35b3dcd5a4989fe82bb617daf9eb1f20 662 Pfam PF13193 AMP-binding enzyme C-terminal domain 531 608 1.9E-16 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain DB34_05745 35b3dcd5a4989fe82bb617daf9eb1f20 662 Gene3D G3DSA:3.40.50.12780 59 515 1.2E-97 T 11-10-2018 DB34_05745 35b3dcd5a4989fe82bb617daf9eb1f20 662 ProSitePatterns PS00455 Putative AMP-binding domain signature. 261 272 - T 11-10-2018 IPR020845 AMP-binding, conserved site DB34_05745 35b3dcd5a4989fe82bb617daf9eb1f20 662 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 25 640 2.2E-241 T 11-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 DB34_05745 35b3dcd5a4989fe82bb617daf9eb1f20 662 Gene3D G3DSA:3.30.300.30 518 647 2.4E-23 T 11-10-2018 DB34_05745 35b3dcd5a4989fe82bb617daf9eb1f20 662 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 26 80 2.3E-14 T 11-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 DB34_05375 02ff65dbc657acc53f87f4280d17472d 152 Gene3D G3DSA:1.10.260.40 7 77 2.4E-17 T 11-10-2018 DB34_05375 02ff65dbc657acc53f87f4280d17472d 152 SUPERFAMILY SSF47413 8 79 5.12E-27 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DB34_05375 02ff65dbc657acc53f87f4280d17472d 152 SMART SM00530 18 73 1.8E-11 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DB34_05375 02ff65dbc657acc53f87f4280d17472d 152 Pfam PF01381 Helix-turn-helix 19 72 5.1E-12 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DB34_10585 c077089fb672b7cdcd71dc2c4653bdca 140 SUPERFAMILY SSF110916 15 101 1.7E-12 T 11-10-2018 DB34_10585 c077089fb672b7cdcd71dc2c4653bdca 140 Pfam PF00472 RF-1 domain 9 134 3.6E-22 T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 DB34_10585 c077089fb672b7cdcd71dc2c4653bdca 140 Gene3D G3DSA:3.30.160.20 2 138 9.3E-38 T 11-10-2018 DB34_01050 af4750392d133750095fd9bfcac67b3a 411 SUPERFAMILY SSF103473 9 396 4.19E-59 T 11-10-2018 IPR036259 MFS transporter superfamily DB34_01050 af4750392d133750095fd9bfcac67b3a 411 Pfam PF07690 Major Facilitator Superfamily 29 346 2.2E-39 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DB34_01050 af4750392d133750095fd9bfcac67b3a 411 Gene3D G3DSA:1.20.1250.20 19 393 3.8E-49 T 11-10-2018 DB34_08485 2687a9bb39f6e39a49bbf081da56a5fd 324 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 11-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 DB34_08485 2687a9bb39f6e39a49bbf081da56a5fd 324 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 231 247 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site DB34_08485 2687a9bb39f6e39a49bbf081da56a5fd 324 Gene3D G3DSA:3.40.50.720 43 316 2.9E-90 T 11-10-2018 DB34_08485 2687a9bb39f6e39a49bbf081da56a5fd 324 SUPERFAMILY SSF52283 31 135 1.04E-17 T 11-10-2018 DB34_08485 2687a9bb39f6e39a49bbf081da56a5fd 324 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 114 291 1.9E-55 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 DB34_08485 2687a9bb39f6e39a49bbf081da56a5fd 324 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 35 322 3.7E-19 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 DB34_08485 2687a9bb39f6e39a49bbf081da56a5fd 324 SUPERFAMILY SSF51735 108 292 1.61E-55 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily DB34_08485 2687a9bb39f6e39a49bbf081da56a5fd 324 Gene3D G3DSA:3.40.50.720 106 294 2.9E-90 T 11-10-2018 DB34_11820 236e8f49906db618378292c6ce58355e 398 Pfam PF12006 Protein of unknown function (DUF3500) 120 392 8.7E-77 T 11-10-2018 IPR021889 Protein of unknown function DUF3500 DB34_10335 2642e57d9ea9daf53c97cc201137e19f 320 Pfam PF02558 Ketopantoate reductase PanE/ApbA 28 161 2.4E-22 T 11-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain DB34_10335 2642e57d9ea9daf53c97cc201137e19f 320 Gene3D G3DSA:3.40.50.720 16 191 7.3E-42 T 11-10-2018 DB34_10335 2642e57d9ea9daf53c97cc201137e19f 320 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 193 314 6.9E-28 T 11-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain DB34_10335 2642e57d9ea9daf53c97cc201137e19f 320 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 27 314 2.8E-61 T 11-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 DB34_10335 2642e57d9ea9daf53c97cc201137e19f 320 SUPERFAMILY SSF48179 193 313 1.09E-28 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DB34_10335 2642e57d9ea9daf53c97cc201137e19f 320 Gene3D G3DSA:1.10.1040.10 193 319 8.1E-36 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DB34_10335 2642e57d9ea9daf53c97cc201137e19f 320 SUPERFAMILY SSF51735 26 146 6.8E-11 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily DB34_11895 a6cc75cacc0437df4017e67c9d50edb7 270 SUPERFAMILY SSF50182 109 173 5.56E-16 T 11-10-2018 IPR010920 LSM domain superfamily DB34_11895 a6cc75cacc0437df4017e67c9d50edb7 270 SUPERFAMILY SSF82861 23 107 2.88E-15 T 11-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 DB34_11895 a6cc75cacc0437df4017e67c9d50edb7 270 Pfam PF00924 Mechanosensitive ion channel 74 220 2.5E-31 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 DB34_11895 a6cc75cacc0437df4017e67c9d50edb7 270 Gene3D G3DSA:2.30.30.60 124 172 1.3E-15 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily DB34_11895 a6cc75cacc0437df4017e67c9d50edb7 270 SUPERFAMILY SSF82689 183 259 4.05E-5 T 11-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 DB34_11895 a6cc75cacc0437df4017e67c9d50edb7 270 Pfam PF05552 Conserved TM helix 12 59 1.7E-13 T 11-10-2018 IPR008910 Conserved TM helix DB34_12825 3d6f07f57ebb0625cff26c58646ad226 485 SUPERFAMILY SSF52091 393 484 3.34E-12 T 11-10-2018 IPR036513 STAS domain superfamily DB34_12825 3d6f07f57ebb0625cff26c58646ad226 485 Pfam PF00916 Sulfate permease family 17 144 1.6E-20 T 11-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 DB34_12825 3d6f07f57ebb0625cff26c58646ad226 485 Pfam PF00916 Sulfate permease family 155 355 1.6E-27 T 11-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 DB34_12825 3d6f07f57ebb0625cff26c58646ad226 485 Gene3D G3DSA:3.30.750.24 385 481 1.2E-25 T 11-10-2018 IPR036513 STAS domain superfamily DB34_09750 bb682495295f49eec759ff675e56d261 144 Pfam PF02566 OsmC-like protein 45 136 3.5E-19 T 11-10-2018 IPR003718 OsmC/Ohr family DB34_09750 bb682495295f49eec759ff675e56d261 144 Gene3D G3DSA:3.30.300.20 2 142 1.7E-44 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta DB34_09750 bb682495295f49eec759ff675e56d261 144 TIGRFAM TIGR03562 osmo_induc_OsmC: peroxiredoxin, OsmC subfamily 5 140 5.7E-60 T 11-10-2018 IPR019904 Peroxiredoxin OsmC GO:0004601|GO:0006979 KEGG: 00480+1.11.1.15 DB34_09750 bb682495295f49eec759ff675e56d261 144 SUPERFAMILY SSF82784 1 139 4.32E-37 T 11-10-2018 IPR036102 OsmC/Ohr superfamily DB34_05395 7ba2ceb897934c2c1d0799bb30b73cd0 162 Pfam PF01475 Ferric uptake regulator family 18 137 3.7E-34 T 11-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 DB34_05395 7ba2ceb897934c2c1d0799bb30b73cd0 162 SUPERFAMILY SSF46785 11 141 7.71E-37 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB34_05395 7ba2ceb897934c2c1d0799bb30b73cd0 162 Gene3D G3DSA:1.10.10.10 7 90 1.4E-29 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB34_05395 7ba2ceb897934c2c1d0799bb30b73cd0 162 Gene3D G3DSA:3.30.1490.190 94 143 3.5E-13 T 11-10-2018 DB34_00825 eeda8da15b212aa8533d067afcd7bcf0 482 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 148 458 6.1E-29 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DB34_00825 eeda8da15b212aa8533d067afcd7bcf0 482 Gene3D G3DSA:3.50.50.60 255 401 1.8E-45 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_00825 eeda8da15b212aa8533d067afcd7bcf0 482 PRINTS PR00419 Adrenodoxin reductase family signature 327 340 1.6E-29 T 11-10-2018 DB34_00825 eeda8da15b212aa8533d067afcd7bcf0 482 PRINTS PR00419 Adrenodoxin reductase family signature 148 170 1.6E-29 T 11-10-2018 DB34_00825 eeda8da15b212aa8533d067afcd7bcf0 482 PRINTS PR00419 Adrenodoxin reductase family signature 293 307 1.6E-29 T 11-10-2018 DB34_00825 eeda8da15b212aa8533d067afcd7bcf0 482 PRINTS PR00419 Adrenodoxin reductase family signature 171 184 1.6E-29 T 11-10-2018 DB34_00825 eeda8da15b212aa8533d067afcd7bcf0 482 Gene3D G3DSA:3.50.50.60 145 208 5.2E-12 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_00825 eeda8da15b212aa8533d067afcd7bcf0 482 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 7 470 5.0E-162 T 11-10-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 DB34_00825 eeda8da15b212aa8533d067afcd7bcf0 482 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 24 134 4.0E-35 T 11-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 DB34_00825 eeda8da15b212aa8533d067afcd7bcf0 482 SUPERFAMILY SSF46548 3 157 8.89E-35 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DB34_00825 eeda8da15b212aa8533d067afcd7bcf0 482 SUPERFAMILY SSF51971 147 402 5.83E-66 T 11-10-2018 DB34_00825 eeda8da15b212aa8533d067afcd7bcf0 482 Gene3D G3DSA:1.10.1060.10 7 144 3.0E-31 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DB34_04875 f33914e3c305ec49fda3780abba0a8e1 331 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 232 4.8E-33 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 DB34_04875 f33914e3c305ec49fda3780abba0a8e1 331 SUPERFAMILY SSF51735 4 329 1.58E-64 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily DB34_04875 f33914e3c305ec49fda3780abba0a8e1 331 Gene3D G3DSA:3.40.50.720 1 331 4.6E-131 T 11-10-2018 DB34_04875 f33914e3c305ec49fda3780abba0a8e1 331 TIGRFAM TIGR03466 HpnA: hopanoid-associated sugar epimerase 4 329 3.7E-147 T 11-10-2018 IPR017829 Hopanoid-associated sugar epimerase KEGG: 00941+1.1.1.219|MetaCyc: PWY-5152 DB34_11865 7f85313fdecac4cc9a0ca648c92eece1 349 Gene3D G3DSA:1.10.287.470 83 116 3.8E-15 T 11-10-2018 DB34_11865 7f85313fdecac4cc9a0ca648c92eece1 349 Gene3D G3DSA:2.40.30.170 228 346 2.0E-23 T 11-10-2018 DB34_11865 7f85313fdecac4cc9a0ca648c92eece1 349 Gene3D G3DSA:2.40.50.100 49 82 3.8E-15 T 11-10-2018 DB34_11865 7f85313fdecac4cc9a0ca648c92eece1 349 Pfam PF13437 HlyD family secretion protein 212 296 3.1E-10 T 11-10-2018 DB34_11865 7f85313fdecac4cc9a0ca648c92eece1 349 SUPERFAMILY SSF111369 49 124 1.44E-10 T 11-10-2018 DB34_11865 7f85313fdecac4cc9a0ca648c92eece1 349 Pfam PF13533 Biotin-lipoyl like 51 97 2.7E-13 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain DB34_11865 7f85313fdecac4cc9a0ca648c92eece1 349 SUPERFAMILY SSF111369 124 301 4.58E-10 T 11-10-2018 DB34_08470 06bbc6641011b6bb5302c4d160f86849 111 Pfam PF04273 Putative phosphatase (DUF442) 3 110 1.6E-35 T 11-10-2018 IPR005939 Beta-lactamase hydrolase-like GO:0016787 DB34_08470 06bbc6641011b6bb5302c4d160f86849 111 SUPERFAMILY SSF52799 4 102 3.59E-7 T 11-10-2018 IPR029021 Protein-tyrosine phosphatase-like DB34_08470 06bbc6641011b6bb5302c4d160f86849 111 TIGRFAM TIGR01244 TIGR01244: TIGR01244 family protein 5 108 1.4E-29 T 11-10-2018 IPR005939 Beta-lactamase hydrolase-like GO:0016787 DB34_08470 06bbc6641011b6bb5302c4d160f86849 111 Gene3D G3DSA:3.90.190.10 1 111 1.3E-34 T 11-10-2018 IPR029021 Protein-tyrosine phosphatase-like DB34_09610 c06b569228571bd98d6d4068c081f7e1 246 SUPERFAMILY SSF53335 18 245 1.48E-39 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB34_09610 c06b569228571bd98d6d4068c081f7e1 246 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 16 240 2.8E-65 T 11-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 DB34_09610 c06b569228571bd98d6d4068c081f7e1 246 Gene3D G3DSA:3.40.50.150 16 245 5.1E-60 T 11-10-2018 DB34_09610 c06b569228571bd98d6d4068c081f7e1 246 Pfam PF13489 Methyltransferase domain 50 218 2.0E-19 T 11-10-2018 DB34_09610 c06b569228571bd98d6d4068c081f7e1 246 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 16 246 32.92 T 11-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 DB34_05220 ba6e5b1aedd20c310885a785c178f62d 190 SUPERFAMILY SSF51391 3 186 1.16E-24 T 11-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DB34_05220 ba6e5b1aedd20c310885a785c178f62d 190 Gene3D G3DSA:3.20.20.70 1 189 5.5E-24 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB34_05220 ba6e5b1aedd20c310885a785c178f62d 190 Pfam PF02581 Thiamine monophosphate synthase 4 175 2.6E-19 T 11-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DB34_04495 48364ab6ca2cd0e46fa7b7d160e74174 844 Pfam PF00271 Helicase conserved C-terminal domain 164 265 3.4E-8 T 11-10-2018 IPR001650 Helicase, C-terminal DB34_04495 48364ab6ca2cd0e46fa7b7d160e74174 844 Gene3D G3DSA:3.40.50.300 147 269 3.3E-65 T 11-10-2018 DB34_04495 48364ab6ca2cd0e46fa7b7d160e74174 844 SUPERFAMILY SSF52540 134 386 6.23E-37 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_04495 48364ab6ca2cd0e46fa7b7d160e74174 844 SUPERFAMILY SSF52540 10 114 1.74E-7 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_04495 48364ab6ca2cd0e46fa7b7d160e74174 844 SMART SM00490 177 266 1.7E-12 T 11-10-2018 IPR001650 Helicase, C-terminal DB34_04495 48364ab6ca2cd0e46fa7b7d160e74174 844 Gene3D G3DSA:3.40.50.300 10 146 3.3E-65 T 11-10-2018 DB34_10830 0a3d444a9fa0bc160924f0b5be641667 330 Pfam PF01965 DJ-1/PfpI family 10 181 1.3E-26 T 11-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 DB34_10830 0a3d444a9fa0bc160924f0b5be641667 330 SUPERFAMILY SSF46689 272 321 2.06E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB34_10830 0a3d444a9fa0bc160924f0b5be641667 330 Gene3D G3DSA:1.10.10.60 216 323 1.2E-24 T 11-10-2018 DB34_10830 0a3d444a9fa0bc160924f0b5be641667 330 SUPERFAMILY SSF46689 221 269 7.62E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB34_10830 0a3d444a9fa0bc160924f0b5be641667 330 Gene3D G3DSA:3.40.50.880 2 208 1.4E-60 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like DB34_10830 0a3d444a9fa0bc160924f0b5be641667 330 Pfam PF12833 Helix-turn-helix domain 242 320 1.4E-21 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB34_10830 0a3d444a9fa0bc160924f0b5be641667 330 SUPERFAMILY SSF52317 8 201 5.89E-50 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like DB34_10830 0a3d444a9fa0bc160924f0b5be641667 330 SMART SM00342 236 318 4.7E-23 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB34_06005 06b52f226d5499db4e6e8fba273a5e50 139 SUPERFAMILY SSF140804 25 114 1.11E-8 T 11-10-2018 IPR027405 YidB-like DB34_00605 9c9699012f1b474e7971a90474c5b757 734 Gene3D G3DSA:2.120.10.90 506 700 1.8E-19 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal DB34_00605 9c9699012f1b474e7971a90474c5b757 734 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 550 597 0.053 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DB34_00605 9c9699012f1b474e7971a90474c5b757 734 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 648 686 0.0018 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DB34_00605 9c9699012f1b474e7971a90474c5b757 734 SUPERFAMILY SSF56719 31 481 2.75E-154 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 DB34_00605 9c9699012f1b474e7971a90474c5b757 734 Gene3D G3DSA:1.10.268.10 371 456 2.2E-182 T 11-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 DB34_00605 9c9699012f1b474e7971a90474c5b757 734 SUPERFAMILY SSF101904 504 732 4.45E-46 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal DB34_00605 9c9699012f1b474e7971a90474c5b757 734 Gene3D G3DSA:3.30.1360.40 237 333 2.2E-182 T 11-10-2018 DB34_00605 9c9699012f1b474e7971a90474c5b757 734 Gene3D G3DSA:3.90.199.10 32 481 2.2E-182 T 11-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 DB34_00605 9c9699012f1b474e7971a90474c5b757 734 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 8 725 3.9E-252 T 11-10-2018 DB34_00605 9c9699012f1b474e7971a90474c5b757 734 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 4 734 31.758 T 11-10-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DB34_00605 9c9699012f1b474e7971a90474c5b757 734 SMART SM00434 11 463 5.2E-226 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DB34_00605 9c9699012f1b474e7971a90474c5b757 734 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 464 1.3E-138 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DB34_00585 ccfca4ade1016e5e193df41d5cb9b9bb 430 PIRSF PIRSF000412 3 430 1.0E-173 T 11-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 DB34_00585 ccfca4ade1016e5e193df41d5cb9b9bb 430 Gene3D G3DSA:3.40.640.10 43 294 9.9E-183 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB34_00585 ccfca4ade1016e5e193df41d5cb9b9bb 430 Gene3D G3DSA:3.90.1150.10 16 398 9.9E-183 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB34_00585 ccfca4ade1016e5e193df41d5cb9b9bb 430 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 228 244 - T 11-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 DB34_00585 ccfca4ade1016e5e193df41d5cb9b9bb 430 Pfam PF00464 Serine hydroxymethyltransferase 14 391 3.1E-174 T 11-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 DB34_00585 ccfca4ade1016e5e193df41d5cb9b9bb 430 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 13 428 53.249 T 11-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 DB34_00585 ccfca4ade1016e5e193df41d5cb9b9bb 430 SUPERFAMILY SSF53383 6 428 7.23E-181 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB34_07185 050e02160b1b007ed31d2bcf2c0eb69c 270 SUPERFAMILY SSF69572 3 252 7.59E-86 T 11-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 DB34_07185 050e02160b1b007ed31d2bcf2c0eb69c 270 Pfam PF00899 ThiF family 13 248 3.3E-62 T 11-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 DB34_07185 050e02160b1b007ed31d2bcf2c0eb69c 270 Gene3D G3DSA:3.40.50.720 5 257 7.7E-89 T 11-10-2018 DB34_04480 6a52817c20173aee2058c940724a6ae0 201 Gene3D G3DSA:1.20.120.80 15 200 1.1E-48 T 11-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB34_04480 6a52817c20173aee2058c940724a6ae0 201 SUPERFAMILY SSF81452 9 197 1.96E-51 T 11-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB34_04480 6a52817c20173aee2058c940724a6ae0 201 Pfam PF00510 Cytochrome c oxidase subunit III 11 197 3.7E-9 T 11-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB34_04480 6a52817c20173aee2058c940724a6ae0 201 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 22 201 3.5E-78 T 11-10-2018 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 DB34_04950 cbdfd49617095e270fe15db761609b42 245 PRINTS PR01805 VacJ lipoprotein signature 101 118 2.9E-18 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 DB34_04950 cbdfd49617095e270fe15db761609b42 245 PRINTS PR01805 VacJ lipoprotein signature 137 154 2.9E-18 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 DB34_04950 cbdfd49617095e270fe15db761609b42 245 PRINTS PR01805 VacJ lipoprotein signature 33 46 2.9E-18 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 DB34_04950 cbdfd49617095e270fe15db761609b42 245 PRINTS PR01805 VacJ lipoprotein signature 50 66 2.9E-18 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 DB34_04950 cbdfd49617095e270fe15db761609b42 245 Pfam PF04333 MlaA lipoprotein 32 227 1.1E-60 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 DB34_13420 fccafc48e8fec0614e32b368b53defc3 67 PRINTS PR00050 Cold shock protein signature 25 34 3.9E-14 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DB34_13420 fccafc48e8fec0614e32b368b53defc3 67 PRINTS PR00050 Cold shock protein signature 4 19 3.9E-14 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DB34_13420 fccafc48e8fec0614e32b368b53defc3 67 PRINTS PR00050 Cold shock protein signature 40 58 3.9E-14 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DB34_13420 fccafc48e8fec0614e32b368b53defc3 67 PIRSF PIRSF002599 1 67 1.9E-22 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 DB34_13420 fccafc48e8fec0614e32b368b53defc3 67 SMART SM00357 3 67 2.9E-27 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 DB34_13420 fccafc48e8fec0614e32b368b53defc3 67 Gene3D G3DSA:2.40.50.140 2 67 3.7E-27 T 11-10-2018 DB34_13420 fccafc48e8fec0614e32b368b53defc3 67 SUPERFAMILY SSF50249 1 65 1.56E-22 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB34_13420 fccafc48e8fec0614e32b368b53defc3 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 3.0E-26 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DB34_13420 fccafc48e8fec0614e32b368b53defc3 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 11-10-2018 IPR019844 Cold-shock conserved site DB34_11305 3bff18d6a5eb8fa698f9970dacb2c24f 405 Pfam PF08757 CotH kinase protein 22 395 3.3E-25 T 11-10-2018 IPR014867 Spore coat protein CotH DB34_09165 3b159e1dc37d5deed460abe1c4258eaf 866 SUPERFAMILY SSF51206 700 823 1.83E-18 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like DB34_09165 3b159e1dc37d5deed460abe1c4258eaf 866 Pfam PF00999 Sodium/hydrogen exchanger family 15 417 5.1E-49 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 DB34_09165 3b159e1dc37d5deed460abe1c4258eaf 866 Pfam PF00027 Cyclic nucleotide-binding domain 728 809 1.7E-6 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain DB34_09165 3b159e1dc37d5deed460abe1c4258eaf 866 Gene3D G3DSA:2.60.120.10 698 827 6.3E-18 T 11-10-2018 IPR014710 RmlC-like jelly roll fold DB34_09165 3b159e1dc37d5deed460abe1c4258eaf 866 Gene3D G3DSA:1.20.1530.20 7 445 2.1E-8 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily DB34_09165 3b159e1dc37d5deed460abe1c4258eaf 866 SMART SM00100 709 824 4.3E-7 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain DB34_04960 10c821be2889cf02c9962b82fa908391 81 Pfam PF13467 Ribbon-helix-helix domain 6 69 6.2E-26 T 11-10-2018 IPR027373 Ribbon-helix-helix domain DB34_04960 10c821be2889cf02c9962b82fa908391 81 Gene3D G3DSA:1.10.3990.20 2 80 7.3E-18 T 11-10-2018 IPR038268 Ribbon-helix-helix domain superfamily DB34_02895 7cdc9b76319328a4d243f2493549ac13 216 Pfam PF04296 Protein of unknown function (DUF448) 16 91 3.0E-19 T 11-10-2018 IPR007393 Domain of unknown function DUF448 DB34_02895 7cdc9b76319328a4d243f2493549ac13 216 SUPERFAMILY SSF55315 98 184 2.36E-10 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like DB34_02895 7cdc9b76319328a4d243f2493549ac13 216 Gene3D G3DSA:3.30.1230.10 8 97 1.5E-13 T 11-10-2018 IPR035931 YlxR-like superfamily DB34_02895 7cdc9b76319328a4d243f2493549ac13 216 Gene3D G3DSA:3.30.1330.30 98 187 1.3E-11 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like DB34_02895 7cdc9b76319328a4d243f2493549ac13 216 SUPERFAMILY SSF64376 13 99 5.75E-21 T 11-10-2018 IPR035931 YlxR-like superfamily DB34_02895 7cdc9b76319328a4d243f2493549ac13 216 Pfam PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 98 175 3.6E-5 T 11-10-2018 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 DB34_08670 834e5cfe9c2b584f16b0cc5b5f0d6144 138 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 39.249 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_08670 834e5cfe9c2b584f16b0cc5b5f0d6144 138 PRINTS PR00060 Ribosomal protein L16 signature 88 117 1.6E-40 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_08670 834e5cfe9c2b584f16b0cc5b5f0d6144 138 PRINTS PR00060 Ribosomal protein L16 signature 24 36 1.6E-40 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_08670 834e5cfe9c2b584f16b0cc5b5f0d6144 138 PRINTS PR00060 Ribosomal protein L16 signature 58 87 1.6E-40 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_08670 834e5cfe9c2b584f16b0cc5b5f0d6144 138 PRINTS PR00060 Ribosomal protein L16 signature 42 53 1.6E-40 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_08670 834e5cfe9c2b584f16b0cc5b5f0d6144 138 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 11-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_08670 834e5cfe9c2b584f16b0cc5b5f0d6144 138 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 11-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_08670 834e5cfe9c2b584f16b0cc5b5f0d6144 138 SUPERFAMILY SSF54686 1 134 9.42E-56 T 11-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 DB34_08670 834e5cfe9c2b584f16b0cc5b5f0d6144 138 Gene3D G3DSA:3.90.1170.10 1 137 3.0E-57 T 11-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 DB34_08670 834e5cfe9c2b584f16b0cc5b5f0d6144 138 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 1.1E-57 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_08670 834e5cfe9c2b584f16b0cc5b5f0d6144 138 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 1.7E-49 T 11-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 DB34_07085 36e54327e3d4377428d57cb7296aa33a 388 SUPERFAMILY SSF51230 5 95 7.46E-21 T 11-10-2018 IPR011053 Single hybrid motif DB34_07085 36e54327e3d4377428d57cb7296aa33a 388 Pfam PF00364 Biotin-requiring enzyme 8 78 6.3E-13 T 11-10-2018 IPR000089 Biotin/lipoyl attachment DB34_07085 36e54327e3d4377428d57cb7296aa33a 388 Gene3D G3DSA:2.40.50.100 3 111 5.1E-22 T 11-10-2018 DB34_07085 36e54327e3d4377428d57cb7296aa33a 388 Gene3D G3DSA:3.40.50.1820 112 380 2.9E-59 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold DB34_07085 36e54327e3d4377428d57cb7296aa33a 388 PRINTS PR00111 Alpha/beta hydrolase fold signature 219 232 1.4E-13 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DB34_07085 36e54327e3d4377428d57cb7296aa33a 388 PRINTS PR00111 Alpha/beta hydrolase fold signature 161 176 1.4E-13 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DB34_07085 36e54327e3d4377428d57cb7296aa33a 388 PRINTS PR00111 Alpha/beta hydrolase fold signature 205 218 1.4E-13 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DB34_07085 36e54327e3d4377428d57cb7296aa33a 388 PRINTS PR00111 Alpha/beta hydrolase fold signature 321 335 1.4E-13 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DB34_07085 36e54327e3d4377428d57cb7296aa33a 388 Pfam PF00561 alpha/beta hydrolase fold 137 246 1.3E-20 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DB34_07085 36e54327e3d4377428d57cb7296aa33a 388 SUPERFAMILY SSF53474 116 373 1.77E-53 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold DB34_03340 9c470153ca007639359a6bd33285d6e7 461 SMART SM00729 50 271 1.2E-43 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DB34_03340 9c470153ca007639359a6bd33285d6e7 461 Gene3D G3DSA:1.10.10.920 365 449 1.8E-18 T 11-10-2018 DB34_03340 9c470153ca007639359a6bd33285d6e7 461 Gene3D G3DSA:3.80.30.20 4 364 1.5E-101 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe DB34_03340 9c470153ca007639359a6bd33285d6e7 461 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 8 444 1.1E-128 T 11-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 DB34_03340 9c470153ca007639359a6bd33285d6e7 461 Pfam PF04055 Radical SAM superfamily 56 225 1.8E-18 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DB34_03340 9c470153ca007639359a6bd33285d6e7 461 Pfam PF06969 HemN C-terminal domain 365 425 4.9E-10 T 11-10-2018 IPR010723 HemN, C-terminal DB34_03340 9c470153ca007639359a6bd33285d6e7 461 SUPERFAMILY SSF102114 8 436 1.96E-113 T 11-10-2018 DB34_03340 9c470153ca007639359a6bd33285d6e7 461 PIRSF PIRSF000167 4 449 6.8E-157 T 11-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 DB34_04415 cee7144be264a7a528856530ad04bafd 420 Pfam PF07690 Major Facilitator Superfamily 29 380 3.9E-39 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DB34_04415 cee7144be264a7a528856530ad04bafd 420 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 25 409 3.3E-88 T 11-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 DB34_04415 cee7144be264a7a528856530ad04bafd 420 Gene3D G3DSA:1.20.1720.10 24 412 9.7E-96 T 11-10-2018 DB34_04415 cee7144be264a7a528856530ad04bafd 420 SUPERFAMILY SSF103473 16 410 2.88E-57 T 11-10-2018 IPR036259 MFS transporter superfamily DB34_04415 cee7144be264a7a528856530ad04bafd 420 ProSitePatterns PS00216 Sugar transport proteins signature 1. 77 93 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 DB34_07635 97b12cec8029386afd1125d7283c96a4 225 Gene3D G3DSA:3.40.50.1390 5 149 9.4E-30 T 11-10-2018 DB34_07635 97b12cec8029386afd1125d7283c96a4 225 SUPERFAMILY SSF53041 7 144 6.54E-29 T 11-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 DB34_07635 97b12cec8029386afd1125d7283c96a4 225 Pfam PF00239 Resolvase, N terminal domain 8 143 1.3E-29 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 DB34_07635 97b12cec8029386afd1125d7283c96a4 225 Pfam PF07508 Recombinase 181 221 4.3E-5 T 11-10-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 DB34_07635 97b12cec8029386afd1125d7283c96a4 225 ProSitePatterns PS00397 Site-specific recombinases active site. 10 18 - T 11-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 DB34_07635 97b12cec8029386afd1125d7283c96a4 225 SMART SM00857 7 144 1.8E-38 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 DB34_08465 9d71457e733ad4ff4c893ceb0e55be4b 139 Gene3D G3DSA:3.10.590.10 1 138 1.4E-54 T 11-10-2018 DB34_08465 9d71457e733ad4ff4c893ceb0e55be4b 139 Pfam PF01878 EVE domain 2 132 6.6E-49 T 11-10-2018 IPR002740 EVE domain DB34_08465 9d71457e733ad4ff4c893ceb0e55be4b 139 SUPERFAMILY SSF88697 1 137 3.48E-54 T 11-10-2018 IPR015947 PUA-like superfamily DB34_00725 78e3a8094ed2fc25db02409a87ad4c69 629 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB34_00725 78e3a8094ed2fc25db02409a87ad4c69 629 SUPERFAMILY SSF52540 294 507 2.55E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_00725 78e3a8094ed2fc25db02409a87ad4c69 629 Pfam PF12848 ABC transporter 216 300 1.1E-21 T 11-10-2018 IPR032781 ABC-transporter extension domain DB34_00725 78e3a8094ed2fc25db02409a87ad4c69 629 SUPERFAMILY SSF52540 4 245 3.94E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_00725 78e3a8094ed2fc25db02409a87ad4c69 629 Pfam PF00005 ABC transporter 327 458 1.9E-20 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB34_00725 78e3a8094ed2fc25db02409a87ad4c69 629 Gene3D G3DSA:3.40.50.300 2 258 1.1E-58 T 11-10-2018 DB34_00725 78e3a8094ed2fc25db02409a87ad4c69 629 Gene3D G3DSA:3.40.50.300 274 542 6.8E-56 T 11-10-2018 DB34_00725 78e3a8094ed2fc25db02409a87ad4c69 629 Pfam PF00005 ABC transporter 19 177 4.2E-25 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB34_00725 78e3a8094ed2fc25db02409a87ad4c69 629 Pfam PF16326 ABC transporter C-terminal domain 559 617 5.2E-9 T 11-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 DB34_00725 78e3a8094ed2fc25db02409a87ad4c69 629 SMART SM00382 28 222 1.5E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_00725 78e3a8094ed2fc25db02409a87ad4c69 629 SMART SM00382 336 503 1.3E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_00725 78e3a8094ed2fc25db02409a87ad4c69 629 ProSitePatterns PS00211 ABC transporters family signature. 430 444 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB34_01685 cc0e237a8fb2f66e165bcaef07cc0e54 475 Gene3D G3DSA:1.10.45.10 427 467 8.6E-12 T 11-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 DB34_01685 cc0e237a8fb2f66e165bcaef07cc0e54 475 SUPERFAMILY SSF55103 230 469 8.01E-64 T 11-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 DB34_01685 cc0e237a8fb2f66e165bcaef07cc0e54 475 Pfam PF01565 FAD binding domain 52 189 2.0E-37 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 DB34_01685 cc0e237a8fb2f66e165bcaef07cc0e54 475 Gene3D G3DSA:3.30.70.2740 345 426 4.6E-12 T 11-10-2018 DB34_01685 cc0e237a8fb2f66e165bcaef07cc0e54 475 Pfam PF02913 FAD linked oxidases, C-terminal domain 226 466 1.4E-57 T 11-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 DB34_01685 cc0e237a8fb2f66e165bcaef07cc0e54 475 SUPERFAMILY SSF56176 18 226 5.14E-67 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 DB34_01685 cc0e237a8fb2f66e165bcaef07cc0e54 475 Gene3D G3DSA:3.30.465.40 19 245 2.9E-73 T 11-10-2018 DB34_12610 9c29cd07f0532ed7cc1d653b7b36c9d4 390 Pfam PF01594 AI-2E family transporter 51 375 2.2E-31 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like DB34_06400 c80f97152e2ce9da3e3acad32aeb339a 107 Pfam PF01844 HNH endonuclease 51 95 1.3E-12 T 11-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 DB34_06400 c80f97152e2ce9da3e3acad32aeb339a 107 Gene3D G3DSA:3.30.40.60 16 106 1.5E-8 T 11-10-2018 DB34_06400 c80f97152e2ce9da3e3acad32aeb339a 107 SMART SM00507 39 90 9.9E-7 T 11-10-2018 IPR003615 HNH nuclease DB34_02590 5b09d3578360a571a1fed18c1eb4079b 261 Pfam PF00005 ABC transporter 25 173 3.9E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB34_02590 5b09d3578360a571a1fed18c1eb4079b 261 Gene3D G3DSA:3.40.50.300 6 260 1.4E-55 T 11-10-2018 DB34_02590 5b09d3578360a571a1fed18c1eb4079b 261 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB34_02590 5b09d3578360a571a1fed18c1eb4079b 261 SUPERFAMILY SSF52540 7 236 2.6E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_02590 5b09d3578360a571a1fed18c1eb4079b 261 SMART SM00382 33 222 4.0E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_04935 e2107bf448b7df438016b435ee0ff35d 559 Pfam PF00005 ABC transporter 344 477 8.0E-25 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB34_04935 e2107bf448b7df438016b435ee0ff35d 559 Pfam PF12848 ABC transporter 234 303 2.6E-12 T 11-10-2018 IPR032781 ABC-transporter extension domain DB34_04935 e2107bf448b7df438016b435ee0ff35d 559 Pfam PF00005 ABC transporter 25 195 8.9E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB34_04935 e2107bf448b7df438016b435ee0ff35d 559 SUPERFAMILY SSF52540 312 526 5.82E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_04935 e2107bf448b7df438016b435ee0ff35d 559 SUPERFAMILY SSF52540 10 247 1.74E-52 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_04935 e2107bf448b7df438016b435ee0ff35d 559 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 5 557 5.8E-294 T 11-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 DB34_04935 e2107bf448b7df438016b435ee0ff35d 559 SMART SM00382 352 528 6.2E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_04935 e2107bf448b7df438016b435ee0ff35d 559 SMART SM00382 33 244 2.8E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_04935 e2107bf448b7df438016b435ee0ff35d 559 Gene3D G3DSA:3.40.50.300 3 289 3.0E-83 T 11-10-2018 DB34_04935 e2107bf448b7df438016b435ee0ff35d 559 Gene3D G3DSA:3.40.50.300 290 555 7.8E-70 T 11-10-2018 DB34_04935 e2107bf448b7df438016b435ee0ff35d 559 ProSitePatterns PS00211 ABC transporters family signature. 167 181 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB34_08950 c68d6c80e70beba44ff2913ffbaa5a04 91 ProSitePatterns PS00057 Ribosomal protein S18 signature. 39 62 - T 11-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_08950 c68d6c80e70beba44ff2913ffbaa5a04 91 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 39 89 1.0E-21 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_08950 c68d6c80e70beba44ff2913ffbaa5a04 91 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 20 91 21.931 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_08950 c68d6c80e70beba44ff2913ffbaa5a04 91 Pfam PF01084 Ribosomal protein S18 37 86 9.8E-26 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_08950 c68d6c80e70beba44ff2913ffbaa5a04 91 Gene3D G3DSA:4.10.640.10 8 91 1.6E-28 T 11-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_08950 c68d6c80e70beba44ff2913ffbaa5a04 91 PRINTS PR00974 Ribosomal protein S18 family signature 46 56 1.3E-18 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_08950 c68d6c80e70beba44ff2913ffbaa5a04 91 PRINTS PR00974 Ribosomal protein S18 family signature 56 63 1.3E-18 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_08950 c68d6c80e70beba44ff2913ffbaa5a04 91 PRINTS PR00974 Ribosomal protein S18 family signature 64 78 1.3E-18 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_08950 c68d6c80e70beba44ff2913ffbaa5a04 91 PRINTS PR00974 Ribosomal protein S18 family signature 78 88 1.3E-18 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_08950 c68d6c80e70beba44ff2913ffbaa5a04 91 TIGRFAM TIGR00165 S18: ribosomal protein bS18 22 90 4.1E-30 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_08950 c68d6c80e70beba44ff2913ffbaa5a04 91 SUPERFAMILY SSF46911 17 90 1.01E-27 T 11-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_09850 781ac55cf83b34caf0b2c65725bfef7e 79 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 77 1.2E-34 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 DB34_09850 781ac55cf83b34caf0b2c65725bfef7e 79 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 76 1.0E-11 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 DB34_09850 781ac55cf83b34caf0b2c65725bfef7e 79 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 11-10-2018 IPR006162 Phosphopantetheine attachment site DB34_09850 781ac55cf83b34caf0b2c65725bfef7e 79 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.967 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 DB34_09850 781ac55cf83b34caf0b2c65725bfef7e 79 SUPERFAMILY SSF47336 1 76 3.27E-24 T 11-10-2018 IPR036736 ACP-like superfamily DB34_09850 781ac55cf83b34caf0b2c65725bfef7e 79 Pfam PF00550 Phosphopantetheine attachment site 6 73 1.1E-15 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain DB34_09850 781ac55cf83b34caf0b2c65725bfef7e 79 Gene3D G3DSA:1.10.1200.10 1 79 2.8E-30 T 11-10-2018 IPR036736 ACP-like superfamily DB34_05480 3f46571cfaa8851015af75e7fcc59186 431 ProSitePatterns PS00616 Histidine acid phosphatases phosphohistidine signature. 45 59 - T 11-10-2018 IPR033379 Histidine acid phosphatase active site DB34_05480 3f46571cfaa8851015af75e7fcc59186 431 Gene3D G3DSA:3.40.50.1240 172 286 6.5E-99 T 11-10-2018 IPR029033 Histidine phosphatase superfamily DB34_05480 3f46571cfaa8851015af75e7fcc59186 431 Gene3D G3DSA:3.40.50.1240 44 426 6.5E-99 T 11-10-2018 IPR029033 Histidine phosphatase superfamily DB34_05480 3f46571cfaa8851015af75e7fcc59186 431 SUPERFAMILY SSF53254 42 392 3.13E-34 T 11-10-2018 IPR029033 Histidine phosphatase superfamily DB34_07340 3f3153fa6c78a5f50bb28197e3fc2de6 123 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 61 16.353 T 11-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB34_07340 3f3153fa6c78a5f50bb28197e3fc2de6 123 SUPERFAMILY SSF63562 1 73 2.35E-20 T 11-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 DB34_07340 3f3153fa6c78a5f50bb28197e3fc2de6 123 SMART SM01409 8 60 4.9E-14 T 11-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 DB34_07340 3f3153fa6c78a5f50bb28197e3fc2de6 123 Gene3D G3DSA:3.90.940.10 1 117 2.5E-23 T 11-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 DB34_07340 3f3153fa6c78a5f50bb28197e3fc2de6 123 Pfam PF01192 RNA polymerase Rpb6 8 58 6.5E-14 T 11-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 DB34_07340 3f3153fa6c78a5f50bb28197e3fc2de6 123 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 58 1.8E-19 T 11-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB34_09550 879c68f2feddc14b23b141a91c9f49cf 190 Gene3D G3DSA:2.50.20.10 35 190 5.0E-5 T 11-10-2018 DB34_09550 879c68f2feddc14b23b141a91c9f49cf 190 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 54 182 1.5E-7 T 11-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like DB34_09550 879c68f2feddc14b23b141a91c9f49cf 190 SUPERFAMILY SSF89392 39 185 2.82E-9 T 11-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX DB34_08130 5b592b51419c4814ad2bae9209e8bf62 285 Pfam PF01555 DNA methylase 49 275 4.3E-43 T 11-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 DB34_08130 5b592b51419c4814ad2bae9209e8bf62 285 SUPERFAMILY SSF53335 25 280 7.08E-58 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB34_08130 5b592b51419c4814ad2bae9209e8bf62 285 ProSitePatterns PS00093 N-4 cytosine-specific DNA methylases signature. 53 58 - T 11-10-2018 IPR017985 DNA methylase, N-4 cytosine-specific, conserved site GO:0003677|GO:0015667|GO:0090124 DB34_08130 5b592b51419c4814ad2bae9209e8bf62 285 Gene3D G3DSA:3.40.50.150 20 285 1.6E-60 T 11-10-2018 DB34_08130 5b592b51419c4814ad2bae9209e8bf62 285 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 83 103 1.2E-27 T 11-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 DB34_08130 5b592b51419c4814ad2bae9209e8bf62 285 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 218 235 1.2E-27 T 11-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 DB34_08130 5b592b51419c4814ad2bae9209e8bf62 285 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 260 280 1.2E-27 T 11-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 DB34_08130 5b592b51419c4814ad2bae9209e8bf62 285 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 48 62 1.2E-27 T 11-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 DB34_08130 5b592b51419c4814ad2bae9209e8bf62 285 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 237 255 1.2E-27 T 11-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 DB34_08745 99d795fe34c085315fc5ef605bf5f31f 125 Gene3D G3DSA:1.10.8.50 1 72 6.6E-29 T 11-10-2018 DB34_08745 99d795fe34c085315fc5ef605bf5f31f 125 ProSitePatterns PS00646 Ribosomal protein S13 signature. 88 101 - T 11-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_08745 99d795fe34c085315fc5ef605bf5f31f 125 SUPERFAMILY SSF46946 2 122 5.21E-46 T 11-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 DB34_08745 99d795fe34c085315fc5ef605bf5f31f 125 Gene3D G3DSA:4.10.910.10 73 125 3.9E-27 T 11-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_08745 99d795fe34c085315fc5ef605bf5f31f 125 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 4.2E-54 T 11-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_08745 99d795fe34c085315fc5ef605bf5f31f 125 PIRSF PIRSF002134 1 125 1.5E-45 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_08745 99d795fe34c085315fc5ef605bf5f31f 125 Pfam PF00416 Ribosomal protein S13/S18 3 109 5.7E-31 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_08745 99d795fe34c085315fc5ef605bf5f31f 125 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 119 27.021 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_08995 c3a500cbd8086704a601193ae5c38f4b 616 SUPERFAMILY SSF90123 40 361 8.63E-36 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DB34_08995 c3a500cbd8086704a601193ae5c38f4b 616 Gene3D G3DSA:3.40.50.300 373 616 2.3E-89 T 11-10-2018 DB34_08995 c3a500cbd8086704a601193ae5c38f4b 616 SMART SM00382 402 588 2.9E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_08995 c3a500cbd8086704a601193ae5c38f4b 616 SUPERFAMILY SSF52540 371 613 1.47E-86 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_08995 c3a500cbd8086704a601193ae5c38f4b 616 Pfam PF00664 ABC transporter transmembrane region 71 322 2.2E-14 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DB34_08995 c3a500cbd8086704a601193ae5c38f4b 616 Pfam PF00005 ABC transporter 393 542 5.6E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB34_08995 c3a500cbd8086704a601193ae5c38f4b 616 Gene3D G3DSA:1.20.1560.10 38 363 1.5E-27 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DB34_08995 c3a500cbd8086704a601193ae5c38f4b 616 ProSitePatterns PS00211 ABC transporters family signature. 514 528 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB34_06275 a2fb52a607bfc2dc5337b48209a34555 123 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 6 79 8.0E-26 T 11-10-2018 IPR025161 Putative transposase IS4/IS5 family DB34_13630 a2fb52a607bfc2dc5337b48209a34555 123 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 6 79 8.0E-26 T 11-10-2018 IPR025161 Putative transposase IS4/IS5 family DB34_11425 a2fb52a607bfc2dc5337b48209a34555 123 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 6 79 8.0E-26 T 11-10-2018 IPR025161 Putative transposase IS4/IS5 family DB34_10520 a2fb52a607bfc2dc5337b48209a34555 123 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 6 79 8.0E-26 T 11-10-2018 IPR025161 Putative transposase IS4/IS5 family DB34_08535 a2fb52a607bfc2dc5337b48209a34555 123 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 6 79 8.0E-26 T 11-10-2018 IPR025161 Putative transposase IS4/IS5 family DB34_08175 a2fb52a607bfc2dc5337b48209a34555 123 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 6 79 8.0E-26 T 11-10-2018 IPR025161 Putative transposase IS4/IS5 family DB34_10415 a2fb52a607bfc2dc5337b48209a34555 123 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 6 79 8.0E-26 T 11-10-2018 IPR025161 Putative transposase IS4/IS5 family DB34_08545 a2fb52a607bfc2dc5337b48209a34555 123 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 6 79 8.0E-26 T 11-10-2018 IPR025161 Putative transposase IS4/IS5 family DB34_11015 a2fb52a607bfc2dc5337b48209a34555 123 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 6 79 8.0E-26 T 11-10-2018 IPR025161 Putative transposase IS4/IS5 family DB34_10675 a2fb52a607bfc2dc5337b48209a34555 123 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 6 79 8.0E-26 T 11-10-2018 IPR025161 Putative transposase IS4/IS5 family DB34_03730 a2fb52a607bfc2dc5337b48209a34555 123 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 6 79 8.0E-26 T 11-10-2018 IPR025161 Putative transposase IS4/IS5 family DB34_01525 a2fb52a607bfc2dc5337b48209a34555 123 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 6 79 8.0E-26 T 11-10-2018 IPR025161 Putative transposase IS4/IS5 family DB34_13560 a2fb52a607bfc2dc5337b48209a34555 123 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 6 79 8.0E-26 T 11-10-2018 IPR025161 Putative transposase IS4/IS5 family DB34_01770 a2fb52a607bfc2dc5337b48209a34555 123 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 6 79 8.0E-26 T 11-10-2018 IPR025161 Putative transposase IS4/IS5 family DB34_03485 a2fb52a607bfc2dc5337b48209a34555 123 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 6 79 8.0E-26 T 11-10-2018 IPR025161 Putative transposase IS4/IS5 family DB34_11110 a2fb52a607bfc2dc5337b48209a34555 123 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 6 79 8.0E-26 T 11-10-2018 IPR025161 Putative transposase IS4/IS5 family DB34_08135 916eb4b7e6b364e634ee65dfb2d6fb6e 475 Pfam PF00034 Cytochrome c 340 458 2.6E-9 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB34_08135 916eb4b7e6b364e634ee65dfb2d6fb6e 475 SUPERFAMILY SSF46626 323 462 1.42E-34 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DB34_08135 916eb4b7e6b364e634ee65dfb2d6fb6e 475 SMART SM01235 13 154 2.8E-53 T 11-10-2018 IPR025992 Haem-binding domain DB34_08135 916eb4b7e6b364e634ee65dfb2d6fb6e 475 Gene3D G3DSA:1.10.760.10 181 461 3.7E-99 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DB34_08135 916eb4b7e6b364e634ee65dfb2d6fb6e 475 Pfam PF14376 Haem-binding domain 16 151 3.9E-31 T 11-10-2018 IPR025992 Haem-binding domain DB34_08135 916eb4b7e6b364e634ee65dfb2d6fb6e 475 Pfam PF03150 Di-haem cytochrome c peroxidase 184 332 4.0E-46 T 11-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 DB34_08135 916eb4b7e6b364e634ee65dfb2d6fb6e 475 Gene3D G3DSA:1.10.760.10 184 333 3.7E-99 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DB34_08135 916eb4b7e6b364e634ee65dfb2d6fb6e 475 SUPERFAMILY SSF46626 167 321 9.42E-46 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DB34_09030 8b4098f76614ef018488a4e6fbcd2e8a 322 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 40 264 34.321 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 DB34_09030 8b4098f76614ef018488a4e6fbcd2e8a 322 Gene3D G3DSA:3.40.1010.10 26 147 1.3E-39 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 DB34_09030 8b4098f76614ef018488a4e6fbcd2e8a 322 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 41 311 1.6E-69 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 DB34_09030 8b4098f76614ef018488a4e6fbcd2e8a 322 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 41 246 5.6E-28 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 DB34_09030 8b4098f76614ef018488a4e6fbcd2e8a 322 PIRSF PIRSF005917 30 316 4.0E-93 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 DB34_09030 8b4098f76614ef018488a4e6fbcd2e8a 322 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 118 129 - T 11-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 DB34_09030 8b4098f76614ef018488a4e6fbcd2e8a 322 Gene3D G3DSA:3.30.950.10 148 268 2.9E-35 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 DB34_09030 8b4098f76614ef018488a4e6fbcd2e8a 322 SUPERFAMILY SSF53790 40 262 6.02E-75 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 DB34_00190 9484f7c3753184affa71e5f0ff9c37e9 212 SUPERFAMILY SSF50022 37 188 3.98E-32 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 DB34_00190 9484f7c3753184affa71e5f0ff9c37e9 212 Pfam PF00355 Rieske [2Fe-2S] domain 62 183 1.6E-10 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 DB34_00190 9484f7c3753184affa71e5f0ff9c37e9 212 PRINTS PR00162 Rieske 2Fe-2S subunit signature 127 138 8.6E-8 T 11-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 DB34_00190 9484f7c3753184affa71e5f0ff9c37e9 212 PRINTS PR00162 Rieske 2Fe-2S subunit signature 168 180 8.6E-8 T 11-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 DB34_00190 9484f7c3753184affa71e5f0ff9c37e9 212 PRINTS PR00162 Rieske 2Fe-2S subunit signature 155 167 8.6E-8 T 11-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 DB34_00190 9484f7c3753184affa71e5f0ff9c37e9 212 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 16 196 7.2E-58 T 11-10-2018 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 DB34_00190 9484f7c3753184affa71e5f0ff9c37e9 212 Gene3D G3DSA:2.102.10.10 49 196 9.1E-45 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 DB34_00190 9484f7c3753184affa71e5f0ff9c37e9 212 Gene3D G3DSA:1.20.5.510 8 47 2.5E-6 T 11-10-2018 DB34_00190 9484f7c3753184affa71e5f0ff9c37e9 212 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 9 46 6.2E-8 T 11-10-2018 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 DB34_02135 eaa49ef6213cade6042e382568a58c3f 588 Pfam PF00571 CBS domain 523 570 2.4E-4 T 11-10-2018 IPR000644 CBS domain DB34_02135 eaa49ef6213cade6042e382568a58c3f 588 Pfam PF00654 Voltage gated chloride channel 93 422 8.0E-52 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 DB34_02135 eaa49ef6213cade6042e382568a58c3f 588 SUPERFAMILY SSF81340 16 443 7.46E-74 T 11-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 DB34_02135 eaa49ef6213cade6042e382568a58c3f 588 Gene3D G3DSA:1.10.3080.10 29 437 4.4E-58 T 11-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 DB34_02135 eaa49ef6213cade6042e382568a58c3f 588 Gene3D G3DSA:3.10.580.10 451 579 4.1E-13 T 11-10-2018 DB34_02135 eaa49ef6213cade6042e382568a58c3f 588 SUPERFAMILY SSF54631 453 582 8.56E-16 T 11-10-2018 DB34_03535 479f686b73b6eb444041487156a00e07 456 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 200 218 1.8E-29 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 DB34_03535 479f686b73b6eb444041487156a00e07 456 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 231 252 1.8E-29 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 DB34_03535 479f686b73b6eb444041487156a00e07 456 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 71 80 1.8E-29 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 DB34_03535 479f686b73b6eb444041487156a00e07 456 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 35 46 1.8E-29 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 DB34_03535 479f686b73b6eb444041487156a00e07 456 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 12 455 6.5E-146 T 11-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 DB34_03535 479f686b73b6eb444041487156a00e07 456 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 25 323 1.0E-117 T 11-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 DB34_03535 479f686b73b6eb444041487156a00e07 456 Gene3D G3DSA:3.40.50.620 4 315 7.9E-125 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DB34_03535 479f686b73b6eb444041487156a00e07 456 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 12 456 36.751 T 11-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 DB34_03535 479f686b73b6eb444041487156a00e07 456 Gene3D G3DSA:1.20.120.640 316 456 2.8E-35 T 11-10-2018 DB34_03535 479f686b73b6eb444041487156a00e07 456 SUPERFAMILY SSF52374 14 323 4.56E-89 T 11-10-2018 DB34_03535 479f686b73b6eb444041487156a00e07 456 SUPERFAMILY SSF47323 335 455 4.71E-32 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB34_03535 479f686b73b6eb444041487156a00e07 456 SMART SM00840 346 400 1.4E-14 T 11-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 DB34_03535 479f686b73b6eb444041487156a00e07 456 Pfam PF09190 DALR domain 347 400 1.0E-8 T 11-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 DB34_04735 9328743f0bde50a029df7c2dd6b4e8a6 784 Pfam PF07715 TonB-dependent Receptor Plug Domain 99 197 1.3E-8 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain DB34_04735 9328743f0bde50a029df7c2dd6b4e8a6 784 Pfam PF00593 TonB dependent receptor 319 781 6.9E-34 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel DB34_04735 9328743f0bde50a029df7c2dd6b4e8a6 784 Gene3D G3DSA:2.170.130.10 94 207 8.8E-15 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily DB34_04735 9328743f0bde50a029df7c2dd6b4e8a6 784 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 767 784 - T 11-10-2018 IPR010917 TonB-dependent receptor, conserved site DB34_04735 9328743f0bde50a029df7c2dd6b4e8a6 784 SUPERFAMILY SSF56935 81 784 3.21E-89 T 11-10-2018 DB34_04735 9328743f0bde50a029df7c2dd6b4e8a6 784 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 100 784 4.1E-71 T 11-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 DB34_04735 9328743f0bde50a029df7c2dd6b4e8a6 784 Gene3D G3DSA:2.40.170.20 208 784 1.3E-74 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DB34_05450 8aa262566b01d279e86c04fc5d96cb5f 229 Gene3D G3DSA:1.10.10.10 129 226 2.6E-31 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB34_05450 8aa262566b01d279e86c04fc5d96cb5f 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 4 225 5.7E-92 T 11-10-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 DB34_05450 8aa262566b01d279e86c04fc5d96cb5f 229 SMART SM00862 149 224 7.3E-26 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DB34_05450 8aa262566b01d279e86c04fc5d96cb5f 229 Gene3D G3DSA:3.40.50.2300 1 128 1.4E-38 T 11-10-2018 DB34_05450 8aa262566b01d279e86c04fc5d96cb5f 229 SUPERFAMILY SSF52172 2 130 1.71E-42 T 11-10-2018 IPR011006 CheY-like superfamily DB34_05450 8aa262566b01d279e86c04fc5d96cb5f 229 Pfam PF00072 Response regulator receiver domain 7 117 4.5E-30 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB34_05450 8aa262566b01d279e86c04fc5d96cb5f 229 SMART SM00448 4 117 6.1E-46 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB34_05450 8aa262566b01d279e86c04fc5d96cb5f 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 224 5.9E-26 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DB34_05450 8aa262566b01d279e86c04fc5d96cb5f 229 SUPERFAMILY SSF46894 123 225 1.05E-28 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DB34_04700 bdad3d97bd922f711d74e1dcddd90e23 261 Gene3D G3DSA:3.40.50.11240 70 244 3.8E-58 T 11-10-2018 DB34_04700 bdad3d97bd922f711d74e1dcddd90e23 261 Pfam PF05985 Ethanolamine ammonia-lyase light chain (EutC) 18 245 2.7E-85 T 11-10-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 DB34_04700 bdad3d97bd922f711d74e1dcddd90e23 261 Gene3D G3DSA:1.10.30.40 11 61 1.4E-7 T 11-10-2018 DB34_04700 bdad3d97bd922f711d74e1dcddd90e23 261 PIRSF PIRSF018982 1 255 1.8E-88 T 11-10-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 DB34_02215 8537cb83f03892b50f63c9469d93e7cf 318 SUPERFAMILY SSF56935 22 316 1.46E-7 T 11-10-2018 DB34_10025 dd8e64e9b3a69f9a8467bfb1f6932df6 158 SUPERFAMILY SSF101307 5 147 2.09E-30 T 11-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 DB34_10025 dd8e64e9b3a69f9a8467bfb1f6932df6 158 PIRSF PIRSF006162 1 156 3.1E-39 T 11-10-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 DB34_10025 dd8e64e9b3a69f9a8467bfb1f6932df6 158 Pfam PF04608 Phosphatidylglycerophosphatase A 5 148 2.0E-42 T 11-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 DB34_03660 229ce0afde6da4ecf2c87d25555c73a4 306 Pfam PF13616 PPIC-type PPIASE domain 150 246 2.2E-25 T 11-10-2018 DB34_03660 229ce0afde6da4ecf2c87d25555c73a4 306 SUPERFAMILY SSF109998 45 183 2.04E-20 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily DB34_03660 229ce0afde6da4ecf2c87d25555c73a4 306 Gene3D G3DSA:1.10.8.1040 46 105 8.6E-6 T 11-10-2018 DB34_03660 229ce0afde6da4ecf2c87d25555c73a4 306 SUPERFAMILY SSF54534 146 245 1.01E-30 T 11-10-2018 DB34_03660 229ce0afde6da4ecf2c87d25555c73a4 306 Gene3D G3DSA:3.10.50.40 147 282 1.4E-36 T 11-10-2018 DB34_03660 229ce0afde6da4ecf2c87d25555c73a4 306 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 182 204 - T 11-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 DB34_03345 52a0161bddc5722e2eb74c3aad2bbd5c 277 Gene3D G3DSA:2.40.160.20 67 277 5.0E-42 T 11-10-2018 DB34_03345 52a0161bddc5722e2eb74c3aad2bbd5c 277 SUPERFAMILY SSF56925 69 277 1.6E-17 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel DB34_03345 52a0161bddc5722e2eb74c3aad2bbd5c 277 Pfam PF03922 OmpW family 69 277 3.7E-39 T 11-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 DB34_12900 51be8e218b9cd36b1557b71c18520ba6 356 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 13 328 3.6E-119 T 11-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 DB34_12900 51be8e218b9cd36b1557b71c18520ba6 356 Gene3D G3DSA:3.20.20.70 16 258 5.4E-76 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB34_12900 51be8e218b9cd36b1557b71c18520ba6 356 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 103 122 - T 11-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 DB34_12900 51be8e218b9cd36b1557b71c18520ba6 356 Gene3D G3DSA:1.10.1200.80 263 336 5.2E-10 T 11-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 DB34_12900 51be8e218b9cd36b1557b71c18520ba6 356 SUPERFAMILY SSF51395 20 328 4.21E-91 T 11-10-2018 DB34_12900 51be8e218b9cd36b1557b71c18520ba6 356 PIRSF PIRSF006621 11 339 2.8E-112 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 DB34_12900 51be8e218b9cd36b1557b71c18520ba6 356 Pfam PF01207 Dihydrouridine synthase (Dus) 22 325 8.7E-108 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 DB34_02495 b98a6f0c3c49c4f23947b1ec066b638a 116 Gene3D G3DSA:3.30.1330.40 1 116 2.6E-34 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 DB34_02495 b98a6f0c3c49c4f23947b1ec066b638a 116 SUPERFAMILY SSF55298 7 113 5.5E-25 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 DB34_02495 b98a6f0c3c49c4f23947b1ec066b638a 116 Pfam PF01042 Endoribonuclease L-PSP 14 113 8.9E-19 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 DB34_12315 821da4cd8b7e2c116a1b0c271e2f9ba0 692 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 11-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_12315 821da4cd8b7e2c116a1b0c271e2f9ba0 692 Gene3D G3DSA:3.40.50.740 446 632 1.0E-18 T 11-10-2018 DB34_12315 821da4cd8b7e2c116a1b0c271e2f9ba0 692 Pfam PF00384 Molybdopterin oxidoreductase 271 599 3.3E-69 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_12315 821da4cd8b7e2c116a1b0c271e2f9ba0 692 SUPERFAMILY SSF54862 75 210 1.59E-37 T 11-10-2018 DB34_12315 821da4cd8b7e2c116a1b0c271e2f9ba0 692 SMART SM00929 83 123 1.1E-20 T 11-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_12315 821da4cd8b7e2c116a1b0c271e2f9ba0 692 Gene3D G3DSA:3.30.70.20 124 204 2.3E-7 T 11-10-2018 DB34_12315 821da4cd8b7e2c116a1b0c271e2f9ba0 692 Pfam PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal 640 679 1.4E-13 T 11-10-2018 IPR015405 NADH-quinone oxidoreductase, chain G, C-terminal GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_12315 821da4cd8b7e2c116a1b0c271e2f9ba0 692 SUPERFAMILY SSF53706 213 627 3.8E-95 T 11-10-2018 DB34_12315 821da4cd8b7e2c116a1b0c271e2f9ba0 692 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 145 155 - T 11-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_12315 821da4cd8b7e2c116a1b0c271e2f9ba0 692 SUPERFAMILY SSF54292 1 74 4.69E-19 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 DB34_12315 821da4cd8b7e2c116a1b0c271e2f9ba0 692 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 2 76 8.1E-16 T 11-10-2018 DB34_12315 821da4cd8b7e2c116a1b0c271e2f9ba0 692 Gene3D G3DSA:3.10.20.740 1 123 1.0E-37 T 11-10-2018 DB34_12315 821da4cd8b7e2c116a1b0c271e2f9ba0 692 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 596 6.7E-221 T 11-10-2018 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_12315 821da4cd8b7e2c116a1b0c271e2f9ba0 692 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 83 118 4.0E-17 T 11-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_12315 821da4cd8b7e2c116a1b0c271e2f9ba0 692 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 98 110 - T 11-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_00690 c68810a780dbed5d88d9d0f28affa368 303 PRINTS PR00987 Glutamyl-tRNA synthetase signature 46 59 8.3E-11 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DB34_00690 c68810a780dbed5d88d9d0f28affa368 303 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 220 8.3E-11 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DB34_00690 c68810a780dbed5d88d9d0f28affa368 303 PRINTS PR00987 Glutamyl-tRNA synthetase signature 18 30 8.3E-11 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DB34_00690 c68810a780dbed5d88d9d0f28affa368 303 PRINTS PR00987 Glutamyl-tRNA synthetase signature 226 234 8.3E-11 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DB34_00690 c68810a780dbed5d88d9d0f28affa368 303 Gene3D G3DSA:3.40.50.620 6 296 2.6E-76 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DB34_00690 c68810a780dbed5d88d9d0f28affa368 303 SUPERFAMILY SSF52374 16 292 1.13E-73 T 11-10-2018 DB34_00690 c68810a780dbed5d88d9d0f28affa368 303 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 16 280 4.8E-43 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 DB34_00690 c68810a780dbed5d88d9d0f28affa368 303 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 21 32 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB34_01875 9a13bd02e67a72ef2de121b0d6c30a0e 208 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 37 208 1.4E-68 T 11-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 DB34_01875 9a13bd02e67a72ef2de121b0d6c30a0e 208 SUPERFAMILY SSF52540 18 208 4.37E-70 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_01875 9a13bd02e67a72ef2de121b0d6c30a0e 208 PIRSF PIRSF015617 11 208 3.9E-71 T 11-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 DB34_01875 9a13bd02e67a72ef2de121b0d6c30a0e 208 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 11 31 4.5E-8 T 11-10-2018 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17 DB34_01875 9a13bd02e67a72ef2de121b0d6c30a0e 208 Gene3D G3DSA:3.40.50.300 16 208 4.7E-67 T 11-10-2018 DB34_01875 9a13bd02e67a72ef2de121b0d6c30a0e 208 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 37 208 2.0E-61 T 11-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 DB34_01855 78aa722a6ceb2d64dd226c026120e53a 372 Gene3D G3DSA:3.40.640.10 71 280 4.0E-56 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB34_01855 78aa722a6ceb2d64dd226c026120e53a 372 SUPERFAMILY SSF53383 39 369 1.11E-53 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB34_01855 78aa722a6ceb2d64dd226c026120e53a 372 Gene3D G3DSA:3.90.1150.10 60 357 4.0E-56 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB34_01855 78aa722a6ceb2d64dd226c026120e53a 372 Pfam PF00155 Aminotransferase class I and II 92 354 4.9E-38 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DB34_01855 78aa722a6ceb2d64dd226c026120e53a 372 TIGRFAM TIGR01140 L_thr_O3P_dcar: threonine-phosphate decarboxylase 41 367 1.7E-95 T 11-10-2018 IPR005860 L-threonine-O-3-phosphate decarboxylase GO:0003824|GO:0009236 KEGG: 00860+4.1.1.81|MetaCyc: PWY-5443 DB34_03800 0010b951bf13111e2e131cf3e2c62c52 124 SUPERFAMILY SSF54197 9 120 8.97E-31 T 11-10-2018 IPR036265 HIT-like superfamily DB34_03800 0010b951bf13111e2e131cf3e2c62c52 124 Gene3D G3DSA:3.30.428.10 12 119 2.0E-30 T 11-10-2018 IPR036265 HIT-like superfamily DB34_03800 0010b951bf13111e2e131cf3e2c62c52 124 Pfam PF01230 HIT domain 20 117 1.0E-23 T 11-10-2018 IPR001310 Histidine triad (HIT) protein DB34_03800 0010b951bf13111e2e131cf3e2c62c52 124 PRINTS PR00332 Histidine triad family signature 35 53 2.8E-18 T 11-10-2018 IPR001310 Histidine triad (HIT) protein DB34_03800 0010b951bf13111e2e131cf3e2c62c52 124 PRINTS PR00332 Histidine triad family signature 104 114 2.8E-18 T 11-10-2018 IPR001310 Histidine triad (HIT) protein DB34_03800 0010b951bf13111e2e131cf3e2c62c52 124 PRINTS PR00332 Histidine triad family signature 14 30 2.8E-18 T 11-10-2018 IPR001310 Histidine triad (HIT) protein DB34_03800 0010b951bf13111e2e131cf3e2c62c52 124 ProSitePatterns PS00892 HIT domain signature. 97 115 - T 11-10-2018 IPR019808 Histidine triad, conserved site DB34_01800 7ba9dabc7604fb617b1a4379d2629319 434 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 303 326 - T 11-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site DB34_01800 7ba9dabc7604fb617b1a4379d2629319 434 Gene3D G3DSA:1.10.3860.10 7 426 1.8E-114 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 DB34_01800 7ba9dabc7604fb617b1a4379d2629319 434 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 43 58 - T 11-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site DB34_01800 7ba9dabc7604fb617b1a4379d2629319 434 PRINTS PR00173 Glutamate-aspartate symporter signature 14 34 1.2E-25 T 11-10-2018 DB34_01800 7ba9dabc7604fb617b1a4379d2629319 434 PRINTS PR00173 Glutamate-aspartate symporter signature 335 354 1.2E-25 T 11-10-2018 DB34_01800 7ba9dabc7604fb617b1a4379d2629319 434 PRINTS PR00173 Glutamate-aspartate symporter signature 153 175 1.2E-25 T 11-10-2018 DB34_01800 7ba9dabc7604fb617b1a4379d2629319 434 PRINTS PR00173 Glutamate-aspartate symporter signature 300 326 1.2E-25 T 11-10-2018 DB34_01800 7ba9dabc7604fb617b1a4379d2629319 434 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 1.2E-25 T 11-10-2018 DB34_01800 7ba9dabc7604fb617b1a4379d2629319 434 PRINTS PR00173 Glutamate-aspartate symporter signature 200 219 1.2E-25 T 11-10-2018 DB34_01800 7ba9dabc7604fb617b1a4379d2629319 434 Pfam PF00375 Sodium:dicarboxylate symporter family 16 409 1.2E-102 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 DB34_01800 7ba9dabc7604fb617b1a4379d2629319 434 SUPERFAMILY SSF118215 16 410 1.03E-111 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 DB34_00390 e208a073091d59b4cfe7ffb1edb3390e 471 Gene3D G3DSA:3.90.190.20 328 465 9.6E-36 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DB34_00390 e208a073091d59b4cfe7ffb1edb3390e 471 SUPERFAMILY SSF51984 10 107 1.0E-9 T 11-10-2018 DB34_00390 e208a073091d59b4cfe7ffb1edb3390e 471 SUPERFAMILY SSF53623 123 320 5.04E-47 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DB34_00390 e208a073091d59b4cfe7ffb1edb3390e 471 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 14 458 2.1E-107 T 11-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DB34_00390 e208a073091d59b4cfe7ffb1edb3390e 471 Gene3D G3DSA:3.40.50.720 9 107 3.5E-14 T 11-10-2018 DB34_00390 e208a073091d59b4cfe7ffb1edb3390e 471 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 12 461 29.649 T 11-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DB34_00390 e208a073091d59b4cfe7ffb1edb3390e 471 Gene3D G3DSA:3.40.1190.10 117 320 5.6E-52 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DB34_00390 e208a073091d59b4cfe7ffb1edb3390e 471 SUPERFAMILY SSF53244 322 460 5.49E-35 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DB34_00390 e208a073091d59b4cfe7ffb1edb3390e 471 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 127 150 - T 11-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 DB34_00390 e208a073091d59b4cfe7ffb1edb3390e 471 Pfam PF08245 Mur ligase middle domain 129 303 5.8E-32 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 DB34_07800 120f4476fa9387113da47573b6d4fa8f 152 SUPERFAMILY SSF54001 26 144 1.77E-23 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily DB34_07800 120f4476fa9387113da47573b6d4fa8f 152 Pfam PF05257 CHAP domain 25 90 9.8E-10 T 11-10-2018 IPR007921 CHAP domain DB34_07800 120f4476fa9387113da47573b6d4fa8f 152 Gene3D G3DSA:3.90.1720.10 19 133 8.0E-12 T 11-10-2018 DB34_04215 e4a7b01734b28d2ea3be938416a92aaf 292 SUPERFAMILY SSF52833 126 286 8.5E-36 T 11-10-2018 IPR036249 Thioredoxin-like superfamily DB34_04215 e4a7b01734b28d2ea3be938416a92aaf 292 Gene3D G3DSA:3.40.30.10 123 290 8.9E-39 T 11-10-2018 DB34_04215 e4a7b01734b28d2ea3be938416a92aaf 292 Pfam PF13462 Thioredoxin 128 287 3.0E-20 T 11-10-2018 IPR012336 Thioredoxin-like fold DB34_05950 12c8e80c55ce3a4f04bc35297c6b807f 301 SUPERFAMILY SSF54211 13 175 8.35E-35 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DB34_05950 12c8e80c55ce3a4f04bc35297c6b807f 301 Gene3D G3DSA:3.30.70.890 179 299 8.0E-24 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily DB34_05950 12c8e80c55ce3a4f04bc35297c6b807f 301 SUPERFAMILY SSF55060 179 298 4.89E-21 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily DB34_05950 12c8e80c55ce3a4f04bc35297c6b807f 301 Gene3D G3DSA:3.30.230.10 2 176 6.6E-48 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DB34_05950 12c8e80c55ce3a4f04bc35297c6b807f 301 Pfam PF08544 GHMP kinases C terminal 238 287 1.1E-5 T 11-10-2018 IPR013750 GHMP kinase, C-terminal domain DB34_05950 12c8e80c55ce3a4f04bc35297c6b807f 301 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 13 282 9.7E-47 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 DB34_05950 12c8e80c55ce3a4f04bc35297c6b807f 301 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 13 301 28.865 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 DB34_05950 12c8e80c55ce3a4f04bc35297c6b807f 301 Pfam PF00288 GHMP kinases N terminal domain 105 160 5.9E-9 T 11-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 DB34_05950 12c8e80c55ce3a4f04bc35297c6b807f 301 PIRSF PIRSF010376 11 300 1.0E-73 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 DB34_05740 a76cec281935a10b67ddf5a09a6b01e1 310 Gene3D G3DSA:3.20.20.60 1 302 2.6E-103 T 11-10-2018 DB34_05740 a76cec281935a10b67ddf5a09a6b01e1 310 SUPERFAMILY SSF51621 14 293 2.42E-95 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 DB34_05740 a76cec281935a10b67ddf5a09a6b01e1 310 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 15 295 4.9E-128 T 11-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 DB34_05740 a76cec281935a10b67ddf5a09a6b01e1 310 ProSitePatterns PS00161 Isocitrate lyase signature. 127 132 - T 11-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 DB34_05740 a76cec281935a10b67ddf5a09a6b01e1 310 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 12 297 47.063 T 11-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 DB34_05740 a76cec281935a10b67ddf5a09a6b01e1 310 Pfam PF13714 Phosphoenolpyruvate phosphomutase 18 259 1.0E-49 T 11-10-2018 DB34_05250 938f649a3db0f98ee9e49cca11fce13f 606 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 309 328 2.7E-68 T 11-10-2018 DB34_05250 938f649a3db0f98ee9e49cca11fce13f 606 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 88 113 2.7E-68 T 11-10-2018 DB34_05250 938f649a3db0f98ee9e49cca11fce13f 606 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 162 180 2.7E-68 T 11-10-2018 DB34_05250 938f649a3db0f98ee9e49cca11fce13f 606 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 279 295 2.7E-68 T 11-10-2018 DB34_05250 938f649a3db0f98ee9e49cca11fce13f 606 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 407 425 2.7E-68 T 11-10-2018 DB34_05250 938f649a3db0f98ee9e49cca11fce13f 606 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 431 449 2.7E-68 T 11-10-2018 DB34_05250 938f649a3db0f98ee9e49cca11fce13f 606 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 472 487 2.7E-68 T 11-10-2018 DB34_05250 938f649a3db0f98ee9e49cca11fce13f 606 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 496 513 2.7E-68 T 11-10-2018 DB34_05250 938f649a3db0f98ee9e49cca11fce13f 606 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 180 199 2.7E-68 T 11-10-2018 DB34_05250 938f649a3db0f98ee9e49cca11fce13f 606 Pfam PF01019 Gamma-glutamyltranspeptidase 81 568 1.6E-167 T 11-10-2018 DB34_05250 938f649a3db0f98ee9e49cca11fce13f 606 SUPERFAMILY SSF56235 59 603 2.12E-170 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DB34_05250 938f649a3db0f98ee9e49cca11fce13f 606 Gene3D G3DSA:3.60.20.40 407 598 9.0E-61 T 11-10-2018 DB34_05250 938f649a3db0f98ee9e49cca11fce13f 606 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 66 562 7.6E-153 T 11-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 DB34_05250 938f649a3db0f98ee9e49cca11fce13f 606 Gene3D G3DSA:1.10.246.130 295 406 6.3E-30 T 11-10-2018 DB34_10105 82c6047af35a3d162455d6948524aaef 114 Pfam PF03840 Preprotein translocase SecG subunit 5 71 3.7E-18 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 DB34_10105 82c6047af35a3d162455d6948524aaef 114 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 72 2.5E-20 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 DB34_10105 82c6047af35a3d162455d6948524aaef 114 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 9.3E-15 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 DB34_10105 82c6047af35a3d162455d6948524aaef 114 PRINTS PR01651 Protein-export SecG membrane protein signature 53 75 9.3E-15 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 DB34_10105 82c6047af35a3d162455d6948524aaef 114 PRINTS PR01651 Protein-export SecG membrane protein signature 37 53 9.3E-15 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 DB34_13440 1228fd27ecd0a796b014512002f5a36e 432 Gene3D G3DSA:3.40.50.1110 199 335 2.0E-5 T 11-10-2018 IPR036514 SGNH hydrolase superfamily DB34_04185 aa4169e3822a2beefb46f5924010281a 297 SUPERFAMILY SSF103481 184 287 1.83E-11 T 11-10-2018 DB34_04185 aa4169e3822a2beefb46f5924010281a 297 SUPERFAMILY SSF103481 43 141 4.45E-17 T 11-10-2018 DB34_04185 aa4169e3822a2beefb46f5924010281a 297 Pfam PF00892 EamA-like transporter family 9 138 3.1E-23 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DB34_04185 aa4169e3822a2beefb46f5924010281a 297 Pfam PF00892 EamA-like transporter family 150 281 2.2E-16 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DB34_10240 955b967ff313e8e8b01a597bab3abb39 172 Pfam PF04314 Copper chaperone PCu(A)C 55 154 1.7E-15 T 11-10-2018 IPR007410 Copper chaperone PCuAC DB34_10240 955b967ff313e8e8b01a597bab3abb39 172 Gene3D G3DSA:2.60.40.1890 52 163 4.9E-18 T 11-10-2018 IPR036182 Copper chaperone PCuAC superfamily DB34_10240 955b967ff313e8e8b01a597bab3abb39 172 SUPERFAMILY SSF110087 45 162 7.72E-24 T 11-10-2018 IPR036182 Copper chaperone PCuAC superfamily DB34_01420 0e9016085196630986a308855b3d106e 332 SUPERFAMILY SSF56655 13 325 9.33E-107 T 11-10-2018 DB34_01420 0e9016085196630986a308855b3d106e 332 Gene3D G3DSA:3.40.190.90 132 297 1.9E-127 T 11-10-2018 DB34_01420 0e9016085196630986a308855b3d106e 332 PIRSF PIRSF004532 13 330 3.9E-135 T 11-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 DB34_01420 0e9016085196630986a308855b3d106e 332 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 15 327 2.8E-113 T 11-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 DB34_01420 0e9016085196630986a308855b3d106e 332 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 15 322 1.8E-137 T 11-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 DB34_01420 0e9016085196630986a308855b3d106e 332 Gene3D G3DSA:3.30.540.10 17 322 1.9E-127 T 11-10-2018 DB34_06315 255bd6d845b442729138e014c89a48e1 269 Gene3D G3DSA:2.60.120.260 10 148 3.6E-5 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily DB34_04685 cbbaf33cdfff1769497ccb8c6f3778d6 344 Pfam PF13531 Bacterial extracellular solute-binding protein 57 297 2.4E-41 T 11-10-2018 DB34_04685 cbbaf33cdfff1769497ccb8c6f3778d6 344 SUPERFAMILY SSF53850 39 343 1.35E-79 T 11-10-2018 DB34_04685 cbbaf33cdfff1769497ccb8c6f3778d6 344 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 35 342 1.1E-134 T 11-10-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 DB34_04685 cbbaf33cdfff1769497ccb8c6f3778d6 344 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 162 170 - T 11-10-2018 IPR034408 Sulphate/thiosulphate-binding site GO:1901681 DB34_04685 cbbaf33cdfff1769497ccb8c6f3778d6 344 Gene3D G3DSA:3.40.190.10 131 340 3.3E-126 T 11-10-2018 DB34_04685 cbbaf33cdfff1769497ccb8c6f3778d6 344 Gene3D G3DSA:3.40.190.10 43 312 3.3E-126 T 11-10-2018 DB34_04270 b9bc6e6a9288f00b8488aae305a6832f 107 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 3 103 6.5E-27 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family DB34_04270 b9bc6e6a9288f00b8488aae305a6832f 107 SUPERFAMILY SSF82607 8 101 4.97E-31 T 11-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily DB34_04270 b9bc6e6a9288f00b8488aae305a6832f 107 PIRSF PIRSF004555 1 107 1.4E-36 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family DB34_04270 b9bc6e6a9288f00b8488aae305a6832f 107 Pfam PF02575 YbaB/EbfC DNA-binding family 8 98 3.1E-32 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family DB34_04270 b9bc6e6a9288f00b8488aae305a6832f 107 Gene3D G3DSA:3.30.1310.10 1 107 7.0E-39 T 11-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily DB34_04270 b9bc6e6a9288f00b8488aae305a6832f 107 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 2 96 21.598 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family DB34_12530 0d0cb6314dd5f64985242b2f6603c62d 446 Pfam PF01523 Putative modulator of DNA gyrase 24 315 2.8E-58 T 11-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 DB34_12530 0d0cb6314dd5f64985242b2f6603c62d 446 SUPERFAMILY SSF111283 3 445 3.79E-118 T 11-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 DB34_12530 0d0cb6314dd5f64985242b2f6603c62d 446 Gene3D G3DSA:3.30.2290.10 1 223 9.1E-62 T 11-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal DB34_02325 857a4b8374ef4b6a29d5cc772bbd6c1c 142 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 2.2E-8 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DB34_02325 857a4b8374ef4b6a29d5cc772bbd6c1c 142 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 16 31 2.2E-8 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DB34_02325 857a4b8374ef4b6a29d5cc772bbd6c1c 142 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 2.2E-8 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DB34_02325 857a4b8374ef4b6a29d5cc772bbd6c1c 142 Gene3D G3DSA:1.10.10.10 2 90 4.8E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB34_02325 857a4b8374ef4b6a29d5cc772bbd6c1c 142 Pfam PF01022 Bacterial regulatory protein, arsR family 22 66 3.2E-9 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DB34_02325 857a4b8374ef4b6a29d5cc772bbd6c1c 142 SMART SM00418 14 97 8.5E-16 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DB34_02325 857a4b8374ef4b6a29d5cc772bbd6c1c 142 SUPERFAMILY SSF46785 3 94 5.0E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB34_07770 574fc0dbc454ed3783e9e9b25bf0dc73 316 SUPERFAMILY SSF64397 23 268 2.49E-56 T 11-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 DB34_07770 574fc0dbc454ed3783e9e9b25bf0dc73 316 Pfam PF01430 Hsp33 protein 23 306 7.2E-75 T 11-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 DB34_07770 574fc0dbc454ed3783e9e9b25bf0dc73 316 Gene3D G3DSA:3.90.1280.10 260 315 7.0E-16 T 11-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 DB34_07770 574fc0dbc454ed3783e9e9b25bf0dc73 316 Gene3D G3DSA:1.10.287.480 210 259 3.1E-8 T 11-10-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily DB34_07770 574fc0dbc454ed3783e9e9b25bf0dc73 316 Gene3D G3DSA:3.55.30.10 21 199 1.6E-50 T 11-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 DB34_07770 574fc0dbc454ed3783e9e9b25bf0dc73 316 PIRSF PIRSF005261 13 316 1.4E-70 T 11-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 DB34_07770 574fc0dbc454ed3783e9e9b25bf0dc73 316 SUPERFAMILY SSF118352 260 312 1.1E-15 T 11-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 DB34_09545 2105b71067b9da336e9c77d0be7d395c 112 SUPERFAMILY SSF82657 13 110 1.44E-25 T 11-10-2018 IPR036065 BolA-like superfamily DB34_09545 2105b71067b9da336e9c77d0be7d395c 112 PIRSF PIRSF003113 1 112 6.3E-29 T 11-10-2018 IPR002634 BolA protein DB34_09545 2105b71067b9da336e9c77d0be7d395c 112 Pfam PF01722 BolA-like protein 25 107 4.3E-28 T 11-10-2018 IPR002634 BolA protein DB34_09545 2105b71067b9da336e9c77d0be7d395c 112 Gene3D G3DSA:3.30.300.90 16 111 7.5E-31 T 11-10-2018 DB34_06180 c40642ece090407061b2dd12fb25eb6f 196 Gene3D G3DSA:3.40.30.10 39 179 4.9E-8 T 11-10-2018 DB34_06180 c40642ece090407061b2dd12fb25eb6f 196 SUPERFAMILY SSF52833 46 176 2.42E-11 T 11-10-2018 IPR036249 Thioredoxin-like superfamily DB34_05005 627ef9e589e9ec36c4b118447d3027ee 249 Pfam PF02219 Methylenetetrahydrofolate reductase 74 208 1.7E-4 T 11-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 DB34_05005 627ef9e589e9ec36c4b118447d3027ee 249 SUPERFAMILY SSF51730 6 235 8.63E-30 T 11-10-2018 IPR029041 FAD-linked oxidoreductase-like DB34_05005 627ef9e589e9ec36c4b118447d3027ee 249 Gene3D G3DSA:3.20.20.220 46 230 3.2E-8 T 11-10-2018 DB34_10030 634661c084bced856c9fd410db6bc7b4 170 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 22 169 1.6E-44 T 11-10-2018 IPR008136 CinA, C-terminal DB34_10030 634661c084bced856c9fd410db6bc7b4 170 SUPERFAMILY SSF142433 13 169 6.93E-50 T 11-10-2018 IPR036653 CinA-like, C-terminal DB34_10030 634661c084bced856c9fd410db6bc7b4 170 Gene3D G3DSA:3.90.950.20 6 169 3.7E-53 T 11-10-2018 IPR036653 CinA-like, C-terminal DB34_10030 634661c084bced856c9fd410db6bc7b4 170 Pfam PF02464 Competence-damaged protein 16 168 1.1E-52 T 11-10-2018 IPR008136 CinA, C-terminal DB34_00070 820ddee05863c22fbb2e5de6c65519a7 402 TIGRFAM TIGR01325 O_suc_HS_sulf: O-succinylhomoserine sulfhydrylase 16 395 2.6E-169 T 11-10-2018 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 DB34_00070 820ddee05863c22fbb2e5de6c65519a7 402 Gene3D G3DSA:3.90.1150.10 265 401 1.7E-47 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB34_00070 820ddee05863c22fbb2e5de6c65519a7 402 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 16 395 9.5E-133 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DB34_00070 820ddee05863c22fbb2e5de6c65519a7 402 Gene3D G3DSA:3.40.640.10 13 264 8.5E-88 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB34_00070 820ddee05863c22fbb2e5de6c65519a7 402 SUPERFAMILY SSF53383 36 397 1.73E-117 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB34_00070 820ddee05863c22fbb2e5de6c65519a7 402 Hamap MF_02056 O-succinylhomoserine sulfhydrylase [metZ]. 16 397 53.021 T 11-10-2018 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 DB34_00070 820ddee05863c22fbb2e5de6c65519a7 402 PIRSF PIRSF001434 1 400 5.2E-127 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DB34_08460 8805e28800ac09e6baac19d37f08570b 97 Pfam PF03795 YCII-related domain 1 86 3.2E-18 T 11-10-2018 IPR005545 YCII-related DB34_08460 8805e28800ac09e6baac19d37f08570b 97 SUPERFAMILY SSF54909 1 89 1.8E-20 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel DB34_08460 8805e28800ac09e6baac19d37f08570b 97 Gene3D G3DSA:3.30.70.1060 1 93 2.3E-28 T 11-10-2018 DB34_09890 3759cd75dfc03226f683103739d9e629 353 Pfam PF09982 Uncharacterized protein conserved in bacteria (DUF2219) 48 351 2.1E-77 T 11-10-2018 IPR018707 Protein of unknown function DUF2219 DB34_09890 3759cd75dfc03226f683103739d9e629 353 Gene3D G3DSA:2.40.128.140 33 349 2.4E-60 T 11-10-2018 IPR037107 Putative outer membrane protein superfamily DB34_06280 170368e4d38ee220058d4ee0586197b5 131 Gene3D G3DSA:3.40.50.1390 1 78 4.1E-13 T 11-10-2018 DB34_06280 170368e4d38ee220058d4ee0586197b5 131 SUPERFAMILY SSF46689 79 122 1.37E-5 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB34_06280 170368e4d38ee220058d4ee0586197b5 131 Pfam PF13384 Homeodomain-like domain 80 114 5.1E-7 T 11-10-2018 DB34_06280 170368e4d38ee220058d4ee0586197b5 131 SUPERFAMILY SSF53041 1 71 2.88E-14 T 11-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 DB34_06280 170368e4d38ee220058d4ee0586197b5 131 Gene3D G3DSA:1.10.10.60 79 117 3.6E-6 T 11-10-2018 DB34_06280 170368e4d38ee220058d4ee0586197b5 131 Pfam PF00239 Resolvase, N terminal domain 1 71 1.5E-15 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 DB34_10450 74034d2c0936ff862aa0d417e25d3aa2 297 SUPERFAMILY SSF88713 3 296 3.61E-85 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 DB34_10450 74034d2c0936ff862aa0d417e25d3aa2 297 Gene3D G3DSA:3.20.20.370 1 297 5.2E-93 T 11-10-2018 DB34_10450 74034d2c0936ff862aa0d417e25d3aa2 297 Pfam PF01522 Polysaccharide deacetylase 75 183 5.2E-11 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 DB34_10450 74034d2c0936ff862aa0d417e25d3aa2 297 TIGRFAM TIGR03212 uraD_N-term-dom: putative urate catabolism protein 4 297 1.1E-156 T 11-10-2018 IPR017625 PuuE allantoinase/chitin deacetylase 1 DB34_10950 5b98c9553c8f60e8fd3f1b7d647c305b 410 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 252 291 1.1E-4 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DB34_10950 5b98c9553c8f60e8fd3f1b7d647c305b 410 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 23 73 4.5E-10 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DB34_10950 5b98c9553c8f60e8fd3f1b7d647c305b 410 TIGRFAM TIGR02435 CobG: precorrin-3B synthase 11 370 3.0E-74 T 11-10-2018 IPR012798 Cobalamin (vitamin B12) biosynthesis CobG-like DB34_10950 5b98c9553c8f60e8fd3f1b7d647c305b 410 SUPERFAMILY SSF55124 227 314 1.42E-8 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DB34_10950 5b98c9553c8f60e8fd3f1b7d647c305b 410 Gene3D G3DSA:3.30.413.10 309 396 1.1E-8 T 11-10-2018 DB34_10950 5b98c9553c8f60e8fd3f1b7d647c305b 410 Gene3D G3DSA:3.90.480.10 28 93 1.1E-18 T 11-10-2018 DB34_10950 5b98c9553c8f60e8fd3f1b7d647c305b 410 Gene3D G3DSA:3.30.413.10 94 193 1.1E-18 T 11-10-2018 DB34_10950 5b98c9553c8f60e8fd3f1b7d647c305b 410 SUPERFAMILY SSF55124 6 79 5.4E-18 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DB34_10950 5b98c9553c8f60e8fd3f1b7d647c305b 410 SUPERFAMILY SSF56014 309 388 1.11E-9 T 11-10-2018 DB34_09910 8b66c3fd28e1b2c347234517bfd41855 298 Gene3D G3DSA:3.40.190.10 1 88 1.6E-25 T 11-10-2018 DB34_09910 8b66c3fd28e1b2c347234517bfd41855 298 Pfam PF01842 ACT domain 194 258 1.6E-7 T 11-10-2018 IPR002912 ACT domain DB34_09910 8b66c3fd28e1b2c347234517bfd41855 298 SUPERFAMILY SSF55021 184 273 3.45E-24 T 11-10-2018 DB34_09910 8b66c3fd28e1b2c347234517bfd41855 298 Gene3D G3DSA:3.30.70.260 185 278 1.9E-21 T 11-10-2018 DB34_09910 8b66c3fd28e1b2c347234517bfd41855 298 PIRSF PIRSF001500 2 276 2.8E-58 T 11-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 DB34_09910 8b66c3fd28e1b2c347234517bfd41855 298 Gene3D G3DSA:3.40.190.10 89 169 6.0E-25 T 11-10-2018 DB34_09910 8b66c3fd28e1b2c347234517bfd41855 298 SUPERFAMILY SSF53850 6 182 2.93E-52 T 11-10-2018 DB34_09910 8b66c3fd28e1b2c347234517bfd41855 298 Pfam PF00800 Prephenate dehydratase 6 180 6.2E-49 T 11-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 DB34_01860 e1bef77c35ad927af7e9846f153f9c5b 329 Pfam PF03186 CobD/Cbib protein 14 306 3.1E-87 T 11-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 DB34_01860 e1bef77c35ad927af7e9846f153f9c5b 329 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 32 291 1.5E-58 T 11-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 DB34_01860 e1bef77c35ad927af7e9846f153f9c5b 329 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 329 84.977 T 11-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 DB34_01415 148acc5b88c7e054170cc1669e2cb26e 437 Gene3D G3DSA:3.30.70.260 350 425 6.9E-147 T 11-10-2018 DB34_01415 148acc5b88c7e054170cc1669e2cb26e 437 SUPERFAMILY SSF51735 9 147 3.2E-31 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily DB34_01415 148acc5b88c7e054170cc1669e2cb26e 437 Gene3D G3DSA:3.40.50.720 11 344 6.9E-147 T 11-10-2018 DB34_01415 148acc5b88c7e054170cc1669e2cb26e 437 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 190 212 - T 11-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 DB34_01415 148acc5b88c7e054170cc1669e2cb26e 437 SUPERFAMILY SSF55021 354 426 2.96E-12 T 11-10-2018 DB34_01415 148acc5b88c7e054170cc1669e2cb26e 437 SUPERFAMILY SSF55347 144 309 2.48E-50 T 11-10-2018 DB34_01415 148acc5b88c7e054170cc1669e2cb26e 437 Gene3D G3DSA:3.30.360.10 143 349 6.9E-147 T 11-10-2018 DB34_01415 148acc5b88c7e054170cc1669e2cb26e 437 PIRSF PIRSF000098 7 437 8.0E-153 T 11-10-2018 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 DB34_01415 148acc5b88c7e054170cc1669e2cb26e 437 Pfam PF00742 Homoserine dehydrogenase 144 322 1.3E-59 T 11-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 DB34_01415 148acc5b88c7e054170cc1669e2cb26e 437 Pfam PF01842 ACT domain 356 419 3.0E-10 T 11-10-2018 IPR002912 ACT domain DB34_01415 148acc5b88c7e054170cc1669e2cb26e 437 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 16 136 5.2E-17 T 11-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 DB34_05825 8ff6fa684e13cfa4bfdebc12eac29dc1 292 SMART SM00450 6 124 1.8E-11 T 11-10-2018 IPR001763 Rhodanese-like domain DB34_05825 8ff6fa684e13cfa4bfdebc12eac29dc1 292 SMART SM00450 147 274 4.1E-17 T 11-10-2018 IPR001763 Rhodanese-like domain DB34_05825 8ff6fa684e13cfa4bfdebc12eac29dc1 292 Gene3D G3DSA:3.40.250.10 142 284 5.8E-31 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily DB34_05825 8ff6fa684e13cfa4bfdebc12eac29dc1 292 SUPERFAMILY SSF52821 4 174 1.31E-30 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily DB34_05825 8ff6fa684e13cfa4bfdebc12eac29dc1 292 SUPERFAMILY SSF52821 150 282 3.14E-29 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily DB34_05825 8ff6fa684e13cfa4bfdebc12eac29dc1 292 Gene3D G3DSA:3.40.250.10 1 141 9.8E-32 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily DB34_05825 8ff6fa684e13cfa4bfdebc12eac29dc1 292 Pfam PF00581 Rhodanese-like domain 7 120 6.3E-21 T 11-10-2018 IPR001763 Rhodanese-like domain DB34_05825 8ff6fa684e13cfa4bfdebc12eac29dc1 292 Pfam PF00581 Rhodanese-like domain 151 270 3.7E-16 T 11-10-2018 IPR001763 Rhodanese-like domain DB34_09060 384e5e7574866b859e5d285c7bae7bfb 194 Pfam PF02698 DUF218 domain 41 174 7.0E-11 T 11-10-2018 IPR003848 Domain of unknown function DUF218 DB34_09060 384e5e7574866b859e5d285c7bae7bfb 194 ProDom PD207074 TRANSMEMBRANE MEMBRANE UNCHARACTERIZED RC1356 RP875 19 169 7.0E-4 T 11-10-2018 DB34_02950 3aabe6018a6e0f4a741818646710e486 199 Pfam PF00005 ABC transporter 2 138 1.1E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB34_02950 3aabe6018a6e0f4a741818646710e486 199 Gene3D G3DSA:3.40.50.300 1 177 1.5E-42 T 11-10-2018 DB34_02950 3aabe6018a6e0f4a741818646710e486 199 SMART SM00382 11 183 3.5E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_02950 3aabe6018a6e0f4a741818646710e486 199 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 1 181 9.3E-61 T 11-10-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004 DB34_02950 3aabe6018a6e0f4a741818646710e486 199 SUPERFAMILY SSF52540 1 169 2.13E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_09895 12227cb5e68879198a5776de7d86661c 201 Pfam PF00313 'Cold-shock' DNA-binding domain 38 100 9.3E-13 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DB34_09895 12227cb5e68879198a5776de7d86661c 201 Pfam PF00313 'Cold-shock' DNA-binding domain 137 199 2.3E-23 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DB34_09895 12227cb5e68879198a5776de7d86661c 201 SUPERFAMILY SSF50249 38 100 5.77E-15 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB34_09895 12227cb5e68879198a5776de7d86661c 201 SUPERFAMILY SSF50249 133 199 1.31E-20 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB34_09895 12227cb5e68879198a5776de7d86661c 201 SMART SM00357 137 201 2.4E-23 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 DB34_09895 12227cb5e68879198a5776de7d86661c 201 SMART SM00357 37 101 8.7E-12 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 DB34_09895 12227cb5e68879198a5776de7d86661c 201 PRINTS PR00050 Cold shock protein signature 138 153 2.4E-13 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DB34_09895 12227cb5e68879198a5776de7d86661c 201 PRINTS PR00050 Cold shock protein signature 174 192 2.4E-13 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DB34_09895 12227cb5e68879198a5776de7d86661c 201 PRINTS PR00050 Cold shock protein signature 159 168 2.4E-13 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DB34_09895 12227cb5e68879198a5776de7d86661c 201 Gene3D G3DSA:2.40.50.140 34 108 1.1E-15 T 11-10-2018 DB34_09895 12227cb5e68879198a5776de7d86661c 201 Gene3D G3DSA:2.40.50.140 132 199 2.6E-24 T 11-10-2018 DB34_09895 12227cb5e68879198a5776de7d86661c 201 ProSitePatterns PS00352 'Cold-shock' domain signature. 149 168 - T 11-10-2018 IPR019844 Cold-shock conserved site DB34_06165 fa2a6f06a06727eb63c372ce8114e492 195 TIGRFAM TIGR02659 TTQ_MADH_Lt: methylamine dehydrogenase (amicyanin) light chain 14 195 2.8E-65 T 11-10-2018 IPR004229 Methylamine dehydrogenase light chain GO:0030288|GO:0052876|GO:0055114 KEGG: 00680+1.4.9.1|MetaCyc: PWY-6967 DB34_06165 fa2a6f06a06727eb63c372ce8114e492 195 PIRSF PIRSF000192 10 195 9.3E-67 T 11-10-2018 IPR016008 Amine dehydrogenase light chain GO:0009308|GO:0030058|GO:0055114 KEGG: 00680+1.4.9.1|MetaCyc: PWY-6967 DB34_06165 fa2a6f06a06727eb63c372ce8114e492 195 Pfam PF02975 Methylamine dehydrogenase, L chain 82 193 5.4E-52 T 11-10-2018 IPR013504 Methylamine/Aralkylamine dehydrogenase light chain, C-terminal domain GO:0009308|GO:0016638|GO:0042597|GO:0055114 KEGG: 00680+1.4.9.1|MetaCyc: PWY-6967 DB34_06165 fa2a6f06a06727eb63c372ce8114e492 195 Gene3D G3DSA:2.60.30.10 59 195 5.8E-51 T 11-10-2018 IPR036560 Methylamine/Aralkylamine dehydrogenase light chain superfamily GO:0009308|GO:0016638|GO:0042597|GO:0055114 KEGG: 00680+1.4.9.1|MetaCyc: PWY-6967 DB34_06165 fa2a6f06a06727eb63c372ce8114e492 195 SUPERFAMILY SSF57561 79 194 2.88E-49 T 11-10-2018 IPR036560 Methylamine/Aralkylamine dehydrogenase light chain superfamily GO:0009308|GO:0016638|GO:0042597|GO:0055114 KEGG: 00680+1.4.9.1|MetaCyc: PWY-6967 DB34_03580 fc7dccdeb08a2603fa4e5f3fbfe39ef1 452 SUPERFAMILY SSF53738 6 185 1.73E-45 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DB34_03580 fc7dccdeb08a2603fa4e5f3fbfe39ef1 452 Gene3D G3DSA:3.40.120.10 4 157 9.8E-48 T 11-10-2018 DB34_03580 fc7dccdeb08a2603fa4e5f3fbfe39ef1 452 SUPERFAMILY SSF53738 160 260 1.18E-28 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DB34_03580 fc7dccdeb08a2603fa4e5f3fbfe39ef1 452 Gene3D G3DSA:3.40.120.10 261 344 3.0E-70 T 11-10-2018 DB34_03580 fc7dccdeb08a2603fa4e5f3fbfe39ef1 452 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 8 446 1.0E-186 T 11-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DB34_03580 fc7dccdeb08a2603fa4e5f3fbfe39ef1 452 Gene3D G3DSA:3.40.120.10 178 367 3.0E-70 T 11-10-2018 DB34_03580 fc7dccdeb08a2603fa4e5f3fbfe39ef1 452 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 4 448 46.459 T 11-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DB34_03580 fc7dccdeb08a2603fa4e5f3fbfe39ef1 452 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 262 372 1.2E-33 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DB34_03580 fc7dccdeb08a2603fa4e5f3fbfe39ef1 452 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 97 111 3.9E-12 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DB34_03580 fc7dccdeb08a2603fa4e5f3fbfe39ef1 452 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 178 197 3.9E-12 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DB34_03580 fc7dccdeb08a2603fa4e5f3fbfe39ef1 452 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 238 253 3.9E-12 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DB34_03580 fc7dccdeb08a2603fa4e5f3fbfe39ef1 452 Gene3D G3DSA:3.30.310.50 375 450 1.3E-20 T 11-10-2018 DB34_03580 fc7dccdeb08a2603fa4e5f3fbfe39ef1 452 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 98 107 - T 11-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DB34_03580 fc7dccdeb08a2603fa4e5f3fbfe39ef1 452 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 6 138 8.2E-43 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DB34_03580 fc7dccdeb08a2603fa4e5f3fbfe39ef1 452 SUPERFAMILY SSF53738 262 368 1.1E-32 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DB34_03580 fc7dccdeb08a2603fa4e5f3fbfe39ef1 452 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 380 445 2.4E-13 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DB34_03580 fc7dccdeb08a2603fa4e5f3fbfe39ef1 452 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 161 258 8.7E-19 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DB34_03580 fc7dccdeb08a2603fa4e5f3fbfe39ef1 452 SUPERFAMILY SSF55957 363 448 3.4E-19 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DB34_04550 14d85e6865dfd7c2c9216ee5403a0ffb 782 Pfam PF12513 Mitochondrial degradasome RNA helicase subunit C terminal 725 771 1.4E-12 T 11-10-2018 IPR022192 Mitochondrial degradasome RNA helicase subunit, C-terminal domain GO:0016817 DB34_04550 14d85e6865dfd7c2c9216ee5403a0ffb 782 SUPERFAMILY SSF52540 310 586 4.1E-32 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_04550 14d85e6865dfd7c2c9216ee5403a0ffb 782 Gene3D G3DSA:1.20.272.40 295 677 6.0E-109 T 11-10-2018 DB34_04550 14d85e6865dfd7c2c9216ee5403a0ffb 782 Gene3D G3DSA:1.20.58.1080 693 781 2.8E-7 T 11-10-2018 DB34_04550 14d85e6865dfd7c2c9216ee5403a0ffb 782 SMART SM00490 485 574 4.5E-18 T 11-10-2018 IPR001650 Helicase, C-terminal DB34_04550 14d85e6865dfd7c2c9216ee5403a0ffb 782 Gene3D G3DSA:3.40.50.300 454 601 6.0E-109 T 11-10-2018 DB34_04550 14d85e6865dfd7c2c9216ee5403a0ffb 782 Gene3D G3DSA:3.40.50.300 299 453 6.0E-109 T 11-10-2018 DB34_04550 14d85e6865dfd7c2c9216ee5403a0ffb 782 Pfam PF00271 Helicase conserved C-terminal domain 473 574 6.6E-12 T 11-10-2018 IPR001650 Helicase, C-terminal DB34_10835 0b5c6da433b17387b247a88b92d1b3c3 209 Gene3D G3DSA:1.10.3210.10 5 173 9.6E-14 T 11-10-2018 DB34_10835 0b5c6da433b17387b247a88b92d1b3c3 209 Pfam PF01966 HD domain 28 113 6.2E-9 T 11-10-2018 IPR006674 HD domain DB34_10835 0b5c6da433b17387b247a88b92d1b3c3 209 SUPERFAMILY SSF109604 14 134 3.14E-16 T 11-10-2018 DB34_05790 0fc0a9f3a998661f0d8f06bb0d078f46 204 Pfam PF01386 Ribosomal L25p family 7 94 9.7E-25 T 11-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 DB34_05790 0fc0a9f3a998661f0d8f06bb0d078f46 204 Gene3D G3DSA:2.40.240.10 4 97 5.0E-28 T 11-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DB34_05790 0fc0a9f3a998661f0d8f06bb0d078f46 204 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 28 97 3.0E-19 T 11-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 DB34_05790 0fc0a9f3a998661f0d8f06bb0d078f46 204 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 103 187 2.1E-26 T 11-10-2018 IPR020057 Ribosomal protein L25, beta domain DB34_05790 0fc0a9f3a998661f0d8f06bb0d078f46 204 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 8 182 1.5E-40 T 11-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 DB34_05790 0fc0a9f3a998661f0d8f06bb0d078f46 204 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 5 186 27.481 T 11-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 DB34_05790 0fc0a9f3a998661f0d8f06bb0d078f46 204 Gene3D G3DSA:2.170.120.20 100 193 1.9E-22 T 11-10-2018 IPR037121 Ribosomal protein L25, C-terminal DB34_05790 0fc0a9f3a998661f0d8f06bb0d078f46 204 SUPERFAMILY SSF50715 5 192 4.36E-52 T 11-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DB34_04860 83367c0a4d40952677715e5fc30a8c64 292 ProSitePatterns PS01044 Squalene and phytoene synthases signature 1. 137 152 - T 11-10-2018 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 DB34_04860 83367c0a4d40952677715e5fc30a8c64 292 SUPERFAMILY SSF48576 14 290 8.78E-61 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily DB34_04860 83367c0a4d40952677715e5fc30a8c64 292 Pfam PF00494 Squalene/phytoene synthase 23 265 1.2E-59 T 11-10-2018 DB34_04860 83367c0a4d40952677715e5fc30a8c64 292 Gene3D G3DSA:1.10.600.10 12 268 1.0E-64 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily DB34_04860 83367c0a4d40952677715e5fc30a8c64 292 ProSitePatterns PS01045 Squalene and phytoene synthases signature 2. 167 192 - T 11-10-2018 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 DB34_04860 83367c0a4d40952677715e5fc30a8c64 292 TIGRFAM TIGR03465 HpnD: squalene synthase HpnD 22 282 7.0E-87 T 11-10-2018 IPR017828 Squalene synthase HpnD-like GO:0016117|GO:0016767 DB34_02310 221273c006db056ab1d42b30b770530b 119 SUPERFAMILY SSF52833 5 116 1.3E-37 T 11-10-2018 IPR036249 Thioredoxin-like superfamily DB34_02310 221273c006db056ab1d42b30b770530b 119 Gene3D G3DSA:3.40.30.10 4 117 5.6E-46 T 11-10-2018 DB34_02310 221273c006db056ab1d42b30b770530b 119 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 5 113 1.6E-30 T 11-10-2018 IPR006504 Transcriptional regulator Spx/MgsR DB34_02310 221273c006db056ab1d42b30b770530b 119 Pfam PF03960 ArsC family 8 113 9.8E-18 T 11-10-2018 IPR006660 Arsenate reductase-like DB34_07490 8100d60045b9738a70ce42040494dea1 186 PRINTS PR01576 Peptide deformylase signature 51 80 3.6E-36 T 11-10-2018 IPR023635 Peptide deformylase DB34_07490 8100d60045b9738a70ce42040494dea1 186 PRINTS PR01576 Peptide deformylase signature 140 169 3.6E-36 T 11-10-2018 IPR023635 Peptide deformylase DB34_07490 8100d60045b9738a70ce42040494dea1 186 PRINTS PR01576 Peptide deformylase signature 109 120 3.6E-36 T 11-10-2018 IPR023635 Peptide deformylase DB34_07490 8100d60045b9738a70ce42040494dea1 186 PRINTS PR01576 Peptide deformylase signature 121 139 3.6E-36 T 11-10-2018 IPR023635 Peptide deformylase DB34_07490 8100d60045b9738a70ce42040494dea1 186 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 21 176 1.2E-50 T 11-10-2018 IPR023635 Peptide deformylase DB34_07490 8100d60045b9738a70ce42040494dea1 186 SUPERFAMILY SSF56420 20 182 8.64E-55 T 11-10-2018 IPR036821 Peptide deformylase superfamily DB34_07490 8100d60045b9738a70ce42040494dea1 186 PIRSF PIRSF004749 3 186 5.4E-54 T 11-10-2018 IPR023635 Peptide deformylase DB34_07490 8100d60045b9738a70ce42040494dea1 186 Gene3D G3DSA:3.90.45.10 6 186 9.6E-57 T 11-10-2018 IPR036821 Peptide deformylase superfamily DB34_07490 8100d60045b9738a70ce42040494dea1 186 Hamap MF_00163 Peptide deformylase [def]. 19 182 29.656 T 11-10-2018 IPR023635 Peptide deformylase DB34_07490 8100d60045b9738a70ce42040494dea1 186 Pfam PF01327 Polypeptide deformylase 22 172 3.6E-49 T 11-10-2018 IPR023635 Peptide deformylase DB34_09960 701c5254af8e0c370cc0aafb30803fea 475 Gene3D G3DSA:3.30.870.10 307 448 1.8E-23 T 11-10-2018 DB34_09960 701c5254af8e0c370cc0aafb30803fea 475 Pfam PF13091 PLD-like domain 318 438 3.0E-22 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 DB34_09960 701c5254af8e0c370cc0aafb30803fea 475 Pfam PF13091 PLD-like domain 132 244 6.2E-15 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 DB34_09960 701c5254af8e0c370cc0aafb30803fea 475 SUPERFAMILY SSF56024 267 441 6.06E-39 T 11-10-2018 DB34_09960 701c5254af8e0c370cc0aafb30803fea 475 SUPERFAMILY SSF56024 108 307 8.97E-48 T 11-10-2018 DB34_09960 701c5254af8e0c370cc0aafb30803fea 475 Pfam PF13396 Phospholipase_D-nuclease N-terminal 21 61 5.2E-7 T 11-10-2018 IPR027379 Cardiolipin synthase N-terminal DB34_09960 701c5254af8e0c370cc0aafb30803fea 475 Gene3D G3DSA:3.30.870.10 108 300 5.5E-43 T 11-10-2018 DB34_09960 701c5254af8e0c370cc0aafb30803fea 475 PIRSF PIRSF000850 276 366 0.6 T 11-10-2018 DB34_09960 701c5254af8e0c370cc0aafb30803fea 475 PIRSF PIRSF000850 125 181 2.4 T 11-10-2018 DB34_09960 701c5254af8e0c370cc0aafb30803fea 475 PIRSF PIRSF000850 378 467 0.014 T 11-10-2018 DB34_09960 701c5254af8e0c370cc0aafb30803fea 475 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 12 475 9.2E-92 T 11-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 DB34_09960 701c5254af8e0c370cc0aafb30803fea 475 SMART SM00155 214 241 0.022 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 DB34_09960 701c5254af8e0c370cc0aafb30803fea 475 SMART SM00155 390 417 4.2E-5 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 DB34_07130 5509f495d02b7bbec17348f365476f22 390 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 101 376 9.0E-76 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 DB34_07130 5509f495d02b7bbec17348f365476f22 390 SUPERFAMILY SSF160240 305 375 1.7E-5 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 DB34_07130 5509f495d02b7bbec17348f365476f22 390 SUPERFAMILY SSF161111 100 295 5.36E-51 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily DB34_07130 5509f495d02b7bbec17348f365476f22 390 Gene3D G3DSA:1.20.1510.10 98 294 3.3E-38 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily DB34_07130 5509f495d02b7bbec17348f365476f22 390 Pfam PF01545 Cation efflux family 105 291 5.9E-41 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 DB34_09340 bf862d8b1c1f25aa350e00cd7b7a5b31 505 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 330 469 1.4E-39 T 11-10-2018 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain DB34_09340 bf862d8b1c1f25aa350e00cd7b7a5b31 505 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 12 221 3.0E-28 T 11-10-2018 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 DB34_09340 bf862d8b1c1f25aa350e00cd7b7a5b31 505 Gene3D G3DSA:3.40.1080.20 343 484 9.8E-37 T 11-10-2018 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily DB34_09340 bf862d8b1c1f25aa350e00cd7b7a5b31 505 TIGRFAM TIGR03458 YgfH_subfam: succinate CoA transferase 11 502 1.3E-221 T 11-10-2018 IPR017821 Succinate CoA transferase GO:0006084|GO:0016740 DB34_09340 bf862d8b1c1f25aa350e00cd7b7a5b31 505 SUPERFAMILY SSF100950 3 228 8.38E-62 T 11-10-2018 IPR037171 NagB/RpiA transferase-like DB34_09340 bf862d8b1c1f25aa350e00cd7b7a5b31 505 Gene3D G3DSA:3.40.1080.10 12 176 1.0E-11 T 11-10-2018 DB34_09340 bf862d8b1c1f25aa350e00cd7b7a5b31 505 SUPERFAMILY SSF100950 231 502 4.19E-79 T 11-10-2018 IPR037171 NagB/RpiA transferase-like DB34_02980 8ad5f6515d7197160fb28c1b7d33e7f4 150 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 6 143 3.4E-60 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DB34_02980 8ad5f6515d7197160fb28c1b7d33e7f4 150 Gene3D G3DSA:3.40.50.9100 1 147 8.5E-66 T 11-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DB34_02980 8ad5f6515d7197160fb28c1b7d33e7f4 150 ProSitePatterns PS01029 Dehydroquinase class II signature. 9 26 - T 11-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DB34_02980 8ad5f6515d7197160fb28c1b7d33e7f4 150 PIRSF PIRSF001399 3 148 1.3E-64 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DB34_02980 8ad5f6515d7197160fb28c1b7d33e7f4 150 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 150 69.066 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DB34_02980 8ad5f6515d7197160fb28c1b7d33e7f4 150 SUPERFAMILY SSF52304 6 146 5.76E-62 T 11-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DB34_02980 8ad5f6515d7197160fb28c1b7d33e7f4 150 Pfam PF01220 Dehydroquinase class II 6 141 4.0E-60 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DB34_02980 8ad5f6515d7197160fb28c1b7d33e7f4 150 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 6 141 4.0E-54 T 11-10-2018 DB34_07135 eeb1b9fff3c2c6549ca1b48c3fa9d2c3 552 PIRSF PIRSF038984 1 545 8.3E-229 T 11-10-2018 IPR028348 FAD dependent protein DB34_07135 eeb1b9fff3c2c6549ca1b48c3fa9d2c3 552 Gene3D G3DSA:3.50.50.60 476 544 3.1E-13 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_07135 eeb1b9fff3c2c6549ca1b48c3fa9d2c3 552 Gene3D G3DSA:3.50.50.60 97 317 3.3E-75 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_07135 eeb1b9fff3c2c6549ca1b48c3fa9d2c3 552 Gene3D G3DSA:3.30.70.2700 1 83 1.6E-22 T 11-10-2018 DB34_07135 eeb1b9fff3c2c6549ca1b48c3fa9d2c3 552 SUPERFAMILY SSF51905 109 539 3.24E-36 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_08090 eb56eb5b8bfa66bf55a081022bf66df2 245 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 19 227 2.1E-35 T 11-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 DB34_08090 eb56eb5b8bfa66bf55a081022bf66df2 245 Pfam PF01914 MarC family integral membrane protein 20 229 7.2E-36 T 11-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 DB34_11755 2798f80c077ef4a608e59a3af0fa1824 324 Gene3D G3DSA:1.10.3720.10 90 314 3.1E-18 T 11-10-2018 IPR035906 MetI-like superfamily DB34_11755 2798f80c077ef4a608e59a3af0fa1824 324 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 321 5.3E-29 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB34_11755 2798f80c077ef4a608e59a3af0fa1824 324 SUPERFAMILY SSF161098 92 304 8.28E-12 T 11-10-2018 IPR035906 MetI-like superfamily DB34_11205 1cc7d9296aff280a2b959b0432795292 165 Gene3D G3DSA:3.10.50.40 22 164 1.7E-32 T 11-10-2018 DB34_11205 1cc7d9296aff280a2b959b0432795292 165 SUPERFAMILY SSF54534 16 159 1.51E-32 T 11-10-2018 DB34_11205 1cc7d9296aff280a2b959b0432795292 165 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 68 156 1.6E-16 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain DB34_04580 4a4bed1f46a3461bc7a0c2cc9a531db2 176 PRINTS PR00338 Transcription termination factor NUSG signature 57 69 4.2E-20 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 DB34_04580 4a4bed1f46a3461bc7a0c2cc9a531db2 176 PRINTS PR00338 Transcription termination factor NUSG signature 134 149 4.2E-20 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 DB34_04580 4a4bed1f46a3461bc7a0c2cc9a531db2 176 PRINTS PR00338 Transcription termination factor NUSG signature 152 168 4.2E-20 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 DB34_04580 4a4bed1f46a3461bc7a0c2cc9a531db2 176 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 2 176 25.75 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 DB34_04580 4a4bed1f46a3461bc7a0c2cc9a531db2 176 SUPERFAMILY SSF82679 3 112 1.7E-39 T 11-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 DB34_04580 4a4bed1f46a3461bc7a0c2cc9a531db2 176 Gene3D G3DSA:2.30.30.30 118 176 8.2E-26 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 DB34_04580 4a4bed1f46a3461bc7a0c2cc9a531db2 176 Gene3D G3DSA:3.30.70.940 1 117 1.0E-44 T 11-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 DB34_04580 4a4bed1f46a3461bc7a0c2cc9a531db2 176 SMART SM00739 122 149 2.3E-4 T 11-10-2018 IPR005824 KOW DB34_04580 4a4bed1f46a3461bc7a0c2cc9a531db2 176 Pfam PF02357 Transcription termination factor nusG 3 106 6.0E-28 T 11-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 DB34_04580 4a4bed1f46a3461bc7a0c2cc9a531db2 176 SUPERFAMILY SSF50104 121 176 7.12E-19 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily DB34_04580 4a4bed1f46a3461bc7a0c2cc9a531db2 176 ProSitePatterns PS01014 Transcription termination factor nusG signature. 159 168 - T 11-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site DB34_04580 4a4bed1f46a3461bc7a0c2cc9a531db2 176 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 5 176 4.2E-71 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 DB34_04580 4a4bed1f46a3461bc7a0c2cc9a531db2 176 SMART SM00738 2 110 2.4E-47 T 11-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 DB34_08665 1cbb235ceeb007454a75de2309f62f25 225 SUPERFAMILY SSF54814 2 105 3.14E-37 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 DB34_08665 1cbb235ceeb007454a75de2309f62f25 225 Gene3D G3DSA:3.30.1140.32 107 207 2.0E-45 T 11-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_08665 1cbb235ceeb007454a75de2309f62f25 225 ProSitePatterns PS00548 Ribosomal protein S3 signature. 162 196 - T 11-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_08665 1cbb235ceeb007454a75de2309f62f25 225 Pfam PF07650 KH domain 37 109 3.1E-18 T 11-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_08665 1cbb235ceeb007454a75de2309f62f25 225 SUPERFAMILY SSF54821 107 205 2.75E-41 T 11-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_08665 1cbb235ceeb007454a75de2309f62f25 225 Pfam PF00189 Ribosomal protein S3, C-terminal domain 119 201 1.2E-40 T 11-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_08665 1cbb235ceeb007454a75de2309f62f25 225 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 205 39.434 T 11-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 DB34_08665 1cbb235ceeb007454a75de2309f62f25 225 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 208 3.0E-93 T 11-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 DB34_08665 1cbb235ceeb007454a75de2309f62f25 225 SMART SM00322 59 124 5.6E-6 T 11-10-2018 IPR004087 K Homology domain GO:0003676 DB34_08665 1cbb235ceeb007454a75de2309f62f25 225 Gene3D G3DSA:3.30.300.20 17 106 1.4E-27 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta DB34_04135 8c377f9a9f1728fa84c3ec172aac594c 342 SUPERFAMILY SSF50129 4 338 3.2E-55 T 11-10-2018 IPR011032 GroES-like superfamily DB34_04135 8c377f9a9f1728fa84c3ec172aac594c 342 SMART SM00829 14 338 4.0E-6 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 DB34_04135 8c377f9a9f1728fa84c3ec172aac594c 342 SUPERFAMILY SSF51735 142 308 1.73E-42 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily DB34_04135 8c377f9a9f1728fa84c3ec172aac594c 342 Gene3D G3DSA:3.40.50.720 152 289 2.2E-127 T 11-10-2018 DB34_04135 8c377f9a9f1728fa84c3ec172aac594c 342 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 64 78 - T 11-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 DB34_04135 8c377f9a9f1728fa84c3ec172aac594c 342 Pfam PF00107 Zinc-binding dehydrogenase 179 304 7.3E-27 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DB34_04135 8c377f9a9f1728fa84c3ec172aac594c 342 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 136 1.6E-32 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DB34_04135 8c377f9a9f1728fa84c3ec172aac594c 342 Gene3D G3DSA:3.90.180.10 16 336 2.2E-127 T 11-10-2018 DB34_01090 0dbd8f019980bd629c1c1fd4173d5d92 209 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 129 198 2.0E-16 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 DB34_01090 0dbd8f019980bd629c1c1fd4173d5d92 209 PRINTS PR01374 Gram-negative bacterial tonB protein signature 124 145 3.3E-7 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 DB34_01090 0dbd8f019980bd629c1c1fd4173d5d92 209 PRINTS PR01374 Gram-negative bacterial tonB protein signature 38 48 3.3E-7 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 DB34_01090 0dbd8f019980bd629c1c1fd4173d5d92 209 PRINTS PR01374 Gram-negative bacterial tonB protein signature 145 163 3.3E-7 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 DB34_01090 0dbd8f019980bd629c1c1fd4173d5d92 209 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 130 207 5.3E-13 T 11-10-2018 IPR006260 TonB/TolA, C-terminal DB34_01090 0dbd8f019980bd629c1c1fd4173d5d92 209 SUPERFAMILY SSF74653 123 203 6.41E-18 T 11-10-2018 DB34_01090 0dbd8f019980bd629c1c1fd4173d5d92 209 Gene3D G3DSA:3.30.1150.10 105 208 1.2E-20 T 11-10-2018 DB34_05515 2c7f16ab1910d0cba96e260d546b57f5 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 3.1E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_05515 2c7f16ab1910d0cba96e260d546b57f5 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 3.1E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_05515 2c7f16ab1910d0cba96e260d546b57f5 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 3.1E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_05515 2c7f16ab1910d0cba96e260d546b57f5 243 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 241 2.9E-53 T 11-10-2018 DB34_05515 2c7f16ab1910d0cba96e260d546b57f5 243 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 183 9.2E-4 T 11-10-2018 DB34_05515 2c7f16ab1910d0cba96e260d546b57f5 243 SUPERFAMILY SSF51735 3 241 1.45E-71 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily DB34_05515 2c7f16ab1910d0cba96e260d546b57f5 243 Gene3D G3DSA:3.40.50.720 1 242 2.1E-74 T 11-10-2018 DB34_05515 2c7f16ab1910d0cba96e260d546b57f5 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 2.2E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_05515 2c7f16ab1910d0cba96e260d546b57f5 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 2.2E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_05515 2c7f16ab1910d0cba96e260d546b57f5 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 2.2E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_05515 2c7f16ab1910d0cba96e260d546b57f5 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 2.2E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_05515 2c7f16ab1910d0cba96e260d546b57f5 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 2.2E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_05515 2c7f16ab1910d0cba96e260d546b57f5 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 2.2E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_05515 2c7f16ab1910d0cba96e260d546b57f5 243 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DB34_01065 30377150d36a141a79fe63a0ca3d829d 289 PIRSF PIRSF006232 4 289 4.7E-89 T 11-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 DB34_01065 30377150d36a141a79fe63a0ca3d829d 289 Gene3D G3DSA:2.60.120.10 18 280 4.0E-80 T 11-10-2018 IPR014710 RmlC-like jelly roll fold DB34_01065 30377150d36a141a79fe63a0ca3d829d 289 Pfam PF05726 Pirin C-terminal cupin domain 184 285 1.2E-30 T 11-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 DB34_01065 30377150d36a141a79fe63a0ca3d829d 289 Pfam PF02678 Pirin 23 128 1.0E-32 T 11-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 DB34_01065 30377150d36a141a79fe63a0ca3d829d 289 SUPERFAMILY SSF51182 14 287 5.17E-83 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily DB34_01065 30377150d36a141a79fe63a0ca3d829d 289 Gene3D G3DSA:2.60.120.10 150 254 4.0E-80 T 11-10-2018 IPR014710 RmlC-like jelly roll fold DB34_02690 f4b01f6abc77433b7037b8ba9832f634 167 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 13 156 3.1E-21 T 11-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 DB34_02690 f4b01f6abc77433b7037b8ba9832f634 167 Pfam PF00430 ATP synthase B/B' CF(0) 10 138 1.8E-26 T 11-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 DB34_02690 f4b01f6abc77433b7037b8ba9832f634 167 Hamap MF_01398 ATP synthase subunit b [atpF]. 3 140 12.258 T 11-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 DB34_03375 0634191e79ebb33ecd3ea48d20100e59 194 Gene3D G3DSA:3.40.50.150 1 194 2.3E-50 T 11-10-2018 DB34_03375 0634191e79ebb33ecd3ea48d20100e59 194 Pfam PF03602 Conserved hypothetical protein 95 2 162 3.5E-46 T 11-10-2018 DB34_03375 0634191e79ebb33ecd3ea48d20100e59 194 PIRSF PIRSF004553 1 173 1.4E-43 T 11-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 DB34_03375 0634191e79ebb33ecd3ea48d20100e59 194 SUPERFAMILY SSF53335 2 162 3.57E-39 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB34_03375 0634191e79ebb33ecd3ea48d20100e59 194 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 1 165 1.1E-39 T 11-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 DB34_05445 b860a955ff0fce766f291c1e7e57e2ad 429 Gene3D G3DSA:3.40.440.10 6 256 6.0E-92 T 11-10-2018 DB34_05445 b860a955ff0fce766f291c1e7e57e2ad 429 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 10 17 - T 11-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 DB34_05445 b860a955ff0fce766f291c1e7e57e2ad 429 Gene3D G3DSA:3.90.170.10 265 429 3.0E-69 T 11-10-2018 DB34_05445 b860a955ff0fce766f291c1e7e57e2ad 429 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 427 9.7E-156 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 DB34_05445 b860a955ff0fce766f291c1e7e57e2ad 429 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 429 207.997 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 DB34_05445 b860a955ff0fce766f291c1e7e57e2ad 429 Gene3D G3DSA:1.10.300.10 107 205 6.0E-92 T 11-10-2018 DB34_05445 b860a955ff0fce766f291c1e7e57e2ad 429 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 132 143 - T 11-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 DB34_05445 b860a955ff0fce766f291c1e7e57e2ad 429 SMART SM00788 3 422 2.9E-281 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 DB34_05445 b860a955ff0fce766f291c1e7e57e2ad 429 Pfam PF00709 Adenylosuccinate synthetase 5 421 9.8E-173 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 DB34_05445 b860a955ff0fce766f291c1e7e57e2ad 429 SUPERFAMILY SSF52540 1 423 1.59E-167 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_10600 009a2bd16a18f555635de3cdf2204933 446 Gene3D G3DSA:2.30.40.10 31 436 7.5E-63 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DB34_10600 009a2bd16a18f555635de3cdf2204933 446 Pfam PF01979 Amidohydrolase family 76 436 1.4E-25 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 DB34_10600 009a2bd16a18f555635de3cdf2204933 446 Gene3D G3DSA:3.20.20.140 81 401 7.5E-63 T 11-10-2018 DB34_10600 009a2bd16a18f555635de3cdf2204933 446 SUPERFAMILY SSF51556 78 401 2.33E-48 T 11-10-2018 IPR032466 Metal-dependent hydrolase DB34_10600 009a2bd16a18f555635de3cdf2204933 446 SUPERFAMILY SSF51338 22 426 6.39E-13 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DB34_00720 5b4af2f26a50c2aec379896467247844 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 1.0E-35 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DB34_00720 5b4af2f26a50c2aec379896467247844 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 1.0E-35 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DB34_00720 5b4af2f26a50c2aec379896467247844 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 1.0E-35 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DB34_00720 5b4af2f26a50c2aec379896467247844 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 1.0E-35 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DB34_00720 5b4af2f26a50c2aec379896467247844 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 1.0E-35 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DB34_00720 5b4af2f26a50c2aec379896467247844 140 Pfam PF00334 Nucleoside diphosphate kinase 4 138 2.9E-53 T 11-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DB34_00720 5b4af2f26a50c2aec379896467247844 140 Gene3D G3DSA:3.30.70.141 1 139 1.7E-56 T 11-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DB34_00720 5b4af2f26a50c2aec379896467247844 140 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 33.356 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DB34_00720 5b4af2f26a50c2aec379896467247844 140 SUPERFAMILY SSF54919 1 139 8.25E-56 T 11-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DB34_00720 5b4af2f26a50c2aec379896467247844 140 SMART SM00562 3 140 8.7E-83 T 11-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DB34_09635 eee07a417c3d99d5077acd8ff359baaa 416 Gene3D G3DSA:3.30.930.10 1 320 7.0E-109 T 11-10-2018 DB34_09635 eee07a417c3d99d5077acd8ff359baaa 416 SUPERFAMILY SSF52954 324 412 1.96E-16 T 11-10-2018 DB34_09635 eee07a417c3d99d5077acd8ff359baaa 416 Gene3D G3DSA:3.40.50.800 323 408 5.5E-18 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily DB34_09635 eee07a417c3d99d5077acd8ff359baaa 416 Pfam PF13393 Histidyl-tRNA synthetase 9 311 4.8E-42 T 11-10-2018 DB34_09635 eee07a417c3d99d5077acd8ff359baaa 416 Pfam PF03129 Anticodon binding domain 325 410 3.8E-10 T 11-10-2018 IPR004154 Anticodon-binding DB34_09635 eee07a417c3d99d5077acd8ff359baaa 416 PIRSF PIRSF001549 1 413 6.6E-113 T 11-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 DB34_09635 eee07a417c3d99d5077acd8ff359baaa 416 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 5 402 1.7E-141 T 11-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 DB34_09635 eee07a417c3d99d5077acd8ff359baaa 416 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 2 412 30.687 T 11-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 DB34_09635 eee07a417c3d99d5077acd8ff359baaa 416 SUPERFAMILY SSF55681 4 317 4.79E-95 T 11-10-2018 DB34_09585 f33c5d672e48547777ff6b68275e296a 255 SUPERFAMILY SSF53271 64 251 5.51E-31 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like DB34_09585 f33c5d672e48547777ff6b68275e296a 255 Gene3D G3DSA:3.40.50.2020 102 252 7.9E-18 T 11-10-2018 DB34_09585 f33c5d672e48547777ff6b68275e296a 255 Pfam PF00156 Phosphoribosyl transferase domain 197 239 3.4E-7 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 DB34_08125 f13ec73d1b2453d7e578cd5fe7865639 226 SUPERFAMILY SSF54427 21 222 7.89E-33 T 11-10-2018 IPR032710 NTF2-like domain superfamily DB34_08125 f13ec73d1b2453d7e578cd5fe7865639 226 Pfam PF04280 Tim44-like domain 80 222 3.8E-31 T 11-10-2018 IPR007379 Tim44-like domain DB34_08125 f13ec73d1b2453d7e578cd5fe7865639 226 SMART SM00978 76 225 1.1E-30 T 11-10-2018 IPR007379 Tim44-like domain DB34_08125 f13ec73d1b2453d7e578cd5fe7865639 226 Gene3D G3DSA:3.10.450.240 70 226 2.6E-28 T 11-10-2018 DB34_01565 57f60f1ca7f9420dd502f9af11c552d8 336 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 237 319 3.3E-12 T 11-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 DB34_01565 57f60f1ca7f9420dd502f9af11c552d8 336 SUPERFAMILY SSF52833 1 134 6.25E-6 T 11-10-2018 IPR036249 Thioredoxin-like superfamily DB34_01565 57f60f1ca7f9420dd502f9af11c552d8 336 SMART SM00702 144 323 6.7E-4 T 11-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 DB34_01565 57f60f1ca7f9420dd502f9af11c552d8 336 Gene3D G3DSA:2.60.120.620 141 322 2.0E-27 T 11-10-2018 DB34_02175 c89ba78c49b661e6fd5ec752b8f7ca49 231 SMART SM00382 26 204 3.8E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_02175 c89ba78c49b661e6fd5ec752b8f7ca49 231 SUPERFAMILY SSF52540 2 221 3.59E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_02175 c89ba78c49b661e6fd5ec752b8f7ca49 231 Pfam PF00005 ABC transporter 17 160 3.7E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB34_02175 c89ba78c49b661e6fd5ec752b8f7ca49 231 TIGRFAM TIGR03410 urea_trans_UrtE: urea ABC transporter, ATP-binding protein UrtE 2 231 3.7E-102 T 11-10-2018 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE DB34_02175 c89ba78c49b661e6fd5ec752b8f7ca49 231 Gene3D G3DSA:3.40.50.300 1 229 2.6E-58 T 11-10-2018 DB34_05265 fb37a7d447338ee43d2555ed3c1c5151 110 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 9 105 29.423 T 11-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS DB34_05265 fb37a7d447338ee43d2555ed3c1c5151 110 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 28 106 4.2E-36 T 11-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 DB34_05265 fb37a7d447338ee43d2555ed3c1c5151 110 SUPERFAMILY SSF54736 25 109 3.14E-33 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like DB34_05265 fb37a7d447338ee43d2555ed3c1c5151 110 Gene3D G3DSA:3.30.1390.10 8 110 1.3E-43 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like DB34_08455 bd623fb56a388e5136f4554977c28e19 257 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 55 237 9.2E-73 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 DB34_08455 bd623fb56a388e5136f4554977c28e19 257 Pfam PF01578 Cytochrome C assembly protein 36 194 1.8E-26 T 11-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 DB34_08455 bd623fb56a388e5136f4554977c28e19 257 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 131 151 7.6E-53 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 DB34_08455 bd623fb56a388e5136f4554977c28e19 257 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 72 92 7.6E-53 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 DB34_08455 bd623fb56a388e5136f4554977c28e19 257 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 214 238 7.6E-53 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 DB34_08455 bd623fb56a388e5136f4554977c28e19 257 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 55 72 7.6E-53 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 DB34_08455 bd623fb56a388e5136f4554977c28e19 257 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 110 130 7.6E-53 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 DB34_08455 bd623fb56a388e5136f4554977c28e19 257 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 166 192 7.6E-53 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 DB34_05190 b8b343499b90f7e5f2c50a4b15d222e6 271 PIRSF PIRSF004789 1 261 1.6E-90 T 11-10-2018 IPR005235 Metallophosphoesterase, YmdB-like DB34_05190 b8b343499b90f7e5f2c50a4b15d222e6 271 Pfam PF13277 YmdB-like protein 4 256 3.0E-101 T 11-10-2018 IPR005235 Metallophosphoesterase, YmdB-like DB34_05190 b8b343499b90f7e5f2c50a4b15d222e6 271 TIGRFAM TIGR00282 TIGR00282: metallophosphoesterase, MG_246/BB_0505 family 1 252 1.6E-76 T 11-10-2018 IPR005235 Metallophosphoesterase, YmdB-like DB34_05190 b8b343499b90f7e5f2c50a4b15d222e6 271 SUPERFAMILY SSF56300 1 258 4.93E-81 T 11-10-2018 DB34_05190 b8b343499b90f7e5f2c50a4b15d222e6 271 Gene3D G3DSA:3.60.21.10 1 266 8.8E-101 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like DB34_08865 e81358c6e849153749b1aaedc281d389 597 ProSitePatterns PS00211 ABC transporters family signature. 495 509 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB34_08865 e81358c6e849153749b1aaedc281d389 597 SUPERFAMILY SSF52540 347 593 3.32E-89 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_08865 e81358c6e849153749b1aaedc281d389 597 Gene3D G3DSA:3.40.50.300 350 597 4.6E-91 T 11-10-2018 DB34_08865 e81358c6e849153749b1aaedc281d389 597 Pfam PF00664 ABC transporter transmembrane region 44 302 2.5E-29 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DB34_08865 e81358c6e849153749b1aaedc281d389 597 SUPERFAMILY SSF90123 29 346 7.32E-58 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DB34_08865 e81358c6e849153749b1aaedc281d389 597 Gene3D G3DSA:1.20.1560.10 9 344 1.6E-61 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DB34_08865 e81358c6e849153749b1aaedc281d389 597 SMART SM00382 383 569 1.5E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_08865 e81358c6e849153749b1aaedc281d389 597 Pfam PF00005 ABC transporter 374 523 3.6E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB34_09650 52bc3e00d105fc394f4e6f8811edcdad 292 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 35 286 6.9E-71 T 11-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 DB34_09650 52bc3e00d105fc394f4e6f8811edcdad 292 Gene3D G3DSA:3.40.50.150 94 292 6.0E-53 T 11-10-2018 DB34_09650 52bc3e00d105fc394f4e6f8811edcdad 292 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 194 200 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 DB34_09650 52bc3e00d105fc394f4e6f8811edcdad 292 SUPERFAMILY SSF53335 13 287 1.63E-44 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB34_09650 52bc3e00d105fc394f4e6f8811edcdad 292 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 13 290 35.507 T 11-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 DB34_09650 52bc3e00d105fc394f4e6f8811edcdad 292 Gene3D G3DSA:1.10.8.10 12 93 9.7E-18 T 11-10-2018 DB34_09650 52bc3e00d105fc394f4e6f8811edcdad 292 Pfam PF13847 Methyltransferase domain 121 211 2.6E-11 T 11-10-2018 IPR025714 Methyltransferase domain DB34_09650 52bc3e00d105fc394f4e6f8811edcdad 292 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 13 288 1.8E-54 T 11-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 DB34_05355 f3119dcc2354fffb25e7e497e702fcd2 319 Pfam PF00892 EamA-like transporter family 9 143 2.1E-10 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DB34_05355 f3119dcc2354fffb25e7e497e702fcd2 319 SUPERFAMILY SSF103481 217 309 9.94E-7 T 11-10-2018 DB34_11880 ee4cda0fc17ca7e6c2e7ec56256aac3a 527 SUPERFAMILY SSF102114 151 371 7.85E-21 T 11-10-2018 DB34_11880 ee4cda0fc17ca7e6c2e7ec56256aac3a 527 Gene3D G3DSA:3.80.30.20 163 362 9.6E-14 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe DB34_11880 ee4cda0fc17ca7e6c2e7ec56256aac3a 527 Pfam PF02310 B12 binding domain 23 121 1.6E-7 T 11-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 DB34_11880 ee4cda0fc17ca7e6c2e7ec56256aac3a 527 Pfam PF13282 Domain of unknown function (DUF4070) 355 496 1.8E-24 T 11-10-2018 IPR025274 Domain of unknown function DUF4070 DB34_11880 ee4cda0fc17ca7e6c2e7ec56256aac3a 527 Pfam PF04055 Radical SAM superfamily 167 323 1.4E-10 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DB34_11880 ee4cda0fc17ca7e6c2e7ec56256aac3a 527 SMART SM00729 163 376 1.4E-4 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DB34_07455 b80930cfb2e416a48b324442f084c717 227 Pfam PF01926 50S ribosome-binding GTPase 52 170 1.4E-19 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 DB34_07455 b80930cfb2e416a48b324442f084c717 227 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 33 218 2.1E-66 T 11-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 DB34_07455 b80930cfb2e416a48b324442f084c717 227 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 38 222 26.972 T 11-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 DB34_07455 b80930cfb2e416a48b324442f084c717 227 SUPERFAMILY SSF52540 40 222 8.99E-36 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_07455 b80930cfb2e416a48b324442f084c717 227 Gene3D G3DSA:3.40.50.300 28 224 9.0E-53 T 11-10-2018 DB34_01400 956cf3ee00de207e4e6da10c9015fc76 215 SUPERFAMILY SSF52096 36 210 1.57E-53 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DB34_01400 956cf3ee00de207e4e6da10c9015fc76 215 Pfam PF00574 Clp protease 39 209 4.5E-61 T 11-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA DB34_01400 956cf3ee00de207e4e6da10c9015fc76 215 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 20 211 35.079 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DB34_01400 956cf3ee00de207e4e6da10c9015fc76 215 Gene3D G3DSA:3.90.226.10 25 214 8.3E-60 T 11-10-2018 DB34_01400 956cf3ee00de207e4e6da10c9015fc76 215 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 130 143 - T 11-10-2018 IPR033135 ClpP, histidine active site DB34_01400 956cf3ee00de207e4e6da10c9015fc76 215 PRINTS PR00127 Clp protease catalytic subunit P signature 108 125 2.9E-29 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DB34_01400 956cf3ee00de207e4e6da10c9015fc76 215 PRINTS PR00127 Clp protease catalytic subunit P signature 186 205 2.9E-29 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DB34_01400 956cf3ee00de207e4e6da10c9015fc76 215 PRINTS PR00127 Clp protease catalytic subunit P signature 36 51 2.9E-29 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DB34_01400 956cf3ee00de207e4e6da10c9015fc76 215 PRINTS PR00127 Clp protease catalytic subunit P signature 75 95 2.9E-29 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DB34_01400 956cf3ee00de207e4e6da10c9015fc76 215 PRINTS PR00127 Clp protease catalytic subunit P signature 129 148 2.9E-29 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DB34_08680 2c278fc97f4bae47f4ba980e2451484a 89 SUPERFAMILY SSF50249 2 75 1.29E-32 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB34_08680 2c278fc97f4bae47f4ba980e2451484a 89 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 3 82 24.027 T 11-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_08680 2c278fc97f4bae47f4ba980e2451484a 89 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 3 73 1.1E-35 T 11-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_08680 2c278fc97f4bae47f4ba980e2451484a 89 PRINTS PR00973 Ribosomal protein S17 family signature 22 45 5.4E-11 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_08680 2c278fc97f4bae47f4ba980e2451484a 89 PRINTS PR00973 Ribosomal protein S17 family signature 64 71 5.4E-11 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_08680 2c278fc97f4bae47f4ba980e2451484a 89 PRINTS PR00973 Ribosomal protein S17 family signature 54 64 5.4E-11 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_08680 2c278fc97f4bae47f4ba980e2451484a 89 Gene3D G3DSA:2.40.50.140 1 85 2.8E-35 T 11-10-2018 DB34_08680 2c278fc97f4bae47f4ba980e2451484a 89 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 1 74 9.0E-33 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_08680 2c278fc97f4bae47f4ba980e2451484a 89 Pfam PF00366 Ribosomal protein S17 8 74 4.1E-33 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_09945 1a221cfa425c6020ade0b59ffab9c290 282 SUPERFAMILY SSF52821 2 144 2.75E-36 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily DB34_09945 1a221cfa425c6020ade0b59ffab9c290 282 SUPERFAMILY SSF52821 157 277 4.98E-31 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily DB34_09945 1a221cfa425c6020ade0b59ffab9c290 282 Gene3D G3DSA:3.40.250.10 1 146 1.9E-40 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily DB34_09945 1a221cfa425c6020ade0b59ffab9c290 282 SMART SM00450 153 274 2.0E-9 T 11-10-2018 IPR001763 Rhodanese-like domain DB34_09945 1a221cfa425c6020ade0b59ffab9c290 282 SMART SM00450 5 129 1.6E-16 T 11-10-2018 IPR001763 Rhodanese-like domain DB34_09945 1a221cfa425c6020ade0b59ffab9c290 282 Gene3D G3DSA:3.40.250.10 163 281 8.2E-35 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily DB34_09945 1a221cfa425c6020ade0b59ffab9c290 282 Pfam PF00581 Rhodanese-like domain 167 269 5.5E-8 T 11-10-2018 IPR001763 Rhodanese-like domain DB34_09945 1a221cfa425c6020ade0b59ffab9c290 282 Pfam PF00581 Rhodanese-like domain 7 125 2.9E-13 T 11-10-2018 IPR001763 Rhodanese-like domain DB34_11870 3a63529e517d0e6ac47b30f418e351b0 608 Pfam PF04632 Fusaric acid resistance protein family 40 535 3.3E-15 T 11-10-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0022857|GO:0055085 DB34_07145 cb2a1c7a33996909b8140ef0241bae87 271 Gene3D G3DSA:3.40.50.12370 3 270 4.9E-12 T 11-10-2018 DB34_07145 cb2a1c7a33996909b8140ef0241bae87 271 SUPERFAMILY SSF52402 158 269 5.78E-11 T 11-10-2018 DB34_07145 cb2a1c7a33996909b8140ef0241bae87 271 Pfam PF00582 Universal stress protein family 220 268 3.3E-6 T 11-10-2018 IPR006016 UspA DB34_07810 1453b0442e6e4c8da625fd6faeecb18c 207 Hamap MF_01677 Methylthioribulose-1-phosphate dehydratase [mtnB]. 1 207 97.238 T 11-10-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 DB34_07810 1453b0442e6e4c8da625fd6faeecb18c 207 TIGRFAM TIGR03328 salvage_mtnB: methylthioribulose-1-phosphate dehydratase 18 205 4.7E-66 T 11-10-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 DB34_07810 1453b0442e6e4c8da625fd6faeecb18c 207 Gene3D G3DSA:3.40.225.10 3 206 2.0E-46 T 11-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily DB34_07810 1453b0442e6e4c8da625fd6faeecb18c 207 SUPERFAMILY SSF53639 10 202 2.16E-41 T 11-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily DB34_07810 1453b0442e6e4c8da625fd6faeecb18c 207 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 15 199 2.9E-37 T 11-10-2018 IPR001303 Class II aldolase/adducin N-terminal DB34_07810 1453b0442e6e4c8da625fd6faeecb18c 207 SMART SM01007 13 200 5.8E-47 T 11-10-2018 IPR001303 Class II aldolase/adducin N-terminal DB34_05670 8b816d5a1f3679b67ed2382382ef7dd1 86 Gene3D G3DSA:1.10.10.60 1 57 2.4E-7 T 11-10-2018 DB34_05670 8b816d5a1f3679b67ed2382382ef7dd1 86 SMART SM00717 3 49 0.0039 T 11-10-2018 IPR001005 SANT/Myb domain DB34_05670 8b816d5a1f3679b67ed2382382ef7dd1 86 Pfam PF00249 Myb-like DNA-binding domain 5 42 4.2E-6 T 11-10-2018 IPR001005 SANT/Myb domain DB34_05670 8b816d5a1f3679b67ed2382382ef7dd1 86 SUPERFAMILY SSF46689 5 51 4.99E-7 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB34_00590 c5d75dfc8a16e5a4d8da03a6c3d93c49 493 PIRSF PIRSF006060 15 485 1.7E-92 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DB34_00590 c5d75dfc8a16e5a4d8da03a6c3d93c49 493 Gene3D G3DSA:1.20.1740.10 28 484 1.5E-123 T 11-10-2018 DB34_00590 c5d75dfc8a16e5a4d8da03a6c3d93c49 493 Pfam PF13520 Amino acid permease 33 448 3.2E-50 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DB34_05690 12b095e838fb22ff973e5847a670b02e 242 Pfam PF08795 Putative papain-like cysteine peptidase (DUF1796) 36 171 3.3E-31 T 11-10-2018 IPR014903 Protein of unknown function DUF1796 DB34_06040 a11da8266d5e9553b3ca2044736b33ab 569 Pfam PF00999 Sodium/hydrogen exchanger family 8 413 8.1E-59 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 DB34_06040 a11da8266d5e9553b3ca2044736b33ab 569 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 7 555 9.9E-102 T 11-10-2018 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 DB34_01035 4b86200fe11d7043ea7c1407907aa566 463 SUPERFAMILY SSF53720 4 454 4.19E-140 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DB34_01035 4b86200fe11d7043ea7c1407907aa566 463 Pfam PF00171 Aldehyde dehydrogenase family 3 452 8.3E-138 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DB34_01035 4b86200fe11d7043ea7c1407907aa566 463 Gene3D G3DSA:3.40.605.10 4 452 5.2E-146 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DB34_01035 4b86200fe11d7043ea7c1407907aa566 463 Gene3D G3DSA:3.40.309.10 238 427 5.2E-146 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DB34_06915 dd2317a6b67a2d906a517a1e9e15e374 807 SUPERFAMILY SSF56935 66 771 4.03E-75 T 11-10-2018 DB34_06915 dd2317a6b67a2d906a517a1e9e15e374 807 Pfam PF00593 TonB dependent receptor 300 792 3.1E-26 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel DB34_06915 dd2317a6b67a2d906a517a1e9e15e374 807 Gene3D G3DSA:2.40.170.20 208 804 1.3E-57 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DB34_06915 dd2317a6b67a2d906a517a1e9e15e374 807 Gene3D G3DSA:2.170.130.10 85 185 1.5E-7 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily DB34_06915 dd2317a6b67a2d906a517a1e9e15e374 807 Pfam PF07715 TonB-dependent Receptor Plug Domain 87 186 1.1E-9 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain DB34_01825 6f1cfa6a21073138b850fa9dcac4fc5e 439 SUPERFAMILY SSF46626 330 432 2.58E-18 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DB34_01825 6f1cfa6a21073138b850fa9dcac4fc5e 439 Gene3D G3DSA:1.10.760.10 151 301 5.6E-8 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DB34_01825 6f1cfa6a21073138b850fa9dcac4fc5e 439 Gene3D G3DSA:1.10.760.10 4 144 1.3E-10 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DB34_01825 6f1cfa6a21073138b850fa9dcac4fc5e 439 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 331 416 1.5E-10 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB34_01825 6f1cfa6a21073138b850fa9dcac4fc5e 439 PIRSF PIRSF000018 9 439 1.6E-151 T 11-10-2018 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0016020|GO:0016614|GO:0020037 DB34_01825 6f1cfa6a21073138b850fa9dcac4fc5e 439 SUPERFAMILY SSF46626 188 294 8.79E-18 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DB34_01825 6f1cfa6a21073138b850fa9dcac4fc5e 439 SUPERFAMILY SSF46626 30 160 9.63E-20 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DB34_01825 6f1cfa6a21073138b850fa9dcac4fc5e 439 Gene3D G3DSA:1.10.760.10 309 439 5.0E-25 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DB34_11335 9ee7c5d88835ab5718c0fad4ae59b277 203 PIRSF PIRSF028438 1 203 5.5E-69 T 11-10-2018 IPR016884 Uncharacterised conserved protein UCP028438 DB34_03265 89aa530b3e4b498d380714702fa70bd2 872 PRINTS PR00985 Leucyl-tRNA synthetase signature 161 177 6.0E-44 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DB34_03265 89aa530b3e4b498d380714702fa70bd2 872 PRINTS PR00985 Leucyl-tRNA synthetase signature 542 564 6.0E-44 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DB34_03265 89aa530b3e4b498d380714702fa70bd2 872 PRINTS PR00985 Leucyl-tRNA synthetase signature 193 206 6.0E-44 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DB34_03265 89aa530b3e4b498d380714702fa70bd2 872 PRINTS PR00985 Leucyl-tRNA synthetase signature 504 522 6.0E-44 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DB34_03265 89aa530b3e4b498d380714702fa70bd2 872 PRINTS PR00985 Leucyl-tRNA synthetase signature 135 152 6.0E-44 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DB34_03265 89aa530b3e4b498d380714702fa70bd2 872 PRINTS PR00985 Leucyl-tRNA synthetase signature 223 242 6.0E-44 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DB34_03265 89aa530b3e4b498d380714702fa70bd2 872 PRINTS PR00985 Leucyl-tRNA synthetase signature 575 585 6.0E-44 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DB34_03265 89aa530b3e4b498d380714702fa70bd2 872 Pfam PF08264 Anticodon-binding domain of tRNA 711 834 2.6E-13 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 DB34_03265 89aa530b3e4b498d380714702fa70bd2 872 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 10 870 21.678 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DB34_03265 89aa530b3e4b498d380714702fa70bd2 872 SUPERFAMILY SSF50677 235 432 3.03E-47 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 DB34_03265 89aa530b3e4b498d380714702fa70bd2 872 Gene3D G3DSA:3.90.740.10 235 431 0.0 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 DB34_03265 89aa530b3e4b498d380714702fa70bd2 872 SUPERFAMILY SSF47323 672 870 4.86E-22 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB34_03265 89aa530b3e4b498d380714702fa70bd2 872 Gene3D G3DSA:3.10.330.110 585 637 0.0 T 11-10-2018 DB34_03265 89aa530b3e4b498d380714702fa70bd2 872 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 230 420 4.3E-66 T 11-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 DB34_03265 89aa530b3e4b498d380714702fa70bd2 872 Gene3D G3DSA:1.10.730.10 15 801 0.0 T 11-10-2018 DB34_03265 89aa530b3e4b498d380714702fa70bd2 872 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 50 61 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB34_03265 89aa530b3e4b498d380714702fa70bd2 872 Gene3D G3DSA:3.10.20.590 809 872 1.1E-18 T 11-10-2018 DB34_03265 89aa530b3e4b498d380714702fa70bd2 872 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 19 179 6.9E-21 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB34_03265 89aa530b3e4b498d380714702fa70bd2 872 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 627 667 1.1E-6 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB34_03265 89aa530b3e4b498d380714702fa70bd2 872 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 434 604 3.4E-8 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB34_03265 89aa530b3e4b498d380714702fa70bd2 872 SUPERFAMILY SSF52374 8 675 2.92E-142 T 11-10-2018 DB34_03265 89aa530b3e4b498d380714702fa70bd2 872 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 11 870 5.1E-292 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DB34_03265 89aa530b3e4b498d380714702fa70bd2 872 Gene3D G3DSA:3.40.50.620 41 584 0.0 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DB34_04320 8655da2596ac9610c17e3fb9063d249c 400 Gene3D G3DSA:2.120.10.30 41 392 1.4E-95 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like DB34_04320 8655da2596ac9610c17e3fb9063d249c 400 Pfam PF03022 Major royal jelly protein 118 333 1.1E-22 T 11-10-2018 IPR017996 Major royal jelly protein/protein yellow DB34_04320 8655da2596ac9610c17e3fb9063d249c 400 SUPERFAMILY SSF63829 55 364 2.55E-22 T 11-10-2018 DB34_08695 67af32fc4bcb5f65ab2cc071c3497aa0 189 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 10 189 41.989 T 11-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_08695 67af32fc4bcb5f65ab2cc071c3497aa0 189 ProSitePatterns PS00358 Ribosomal protein L5 signature. 66 82 - T 11-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_08695 67af32fc4bcb5f65ab2cc071c3497aa0 189 SUPERFAMILY SSF55282 12 188 1.3E-73 T 11-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_08695 67af32fc4bcb5f65ab2cc071c3497aa0 189 PIRSF PIRSF002161 8 189 1.7E-64 T 11-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_08695 67af32fc4bcb5f65ab2cc071c3497aa0 189 Pfam PF00281 Ribosomal protein L5 33 89 3.0E-26 T 11-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_08695 67af32fc4bcb5f65ab2cc071c3497aa0 189 Pfam PF00673 ribosomal L5P family C-terminus 93 187 1.1E-39 T 11-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_08695 67af32fc4bcb5f65ab2cc071c3497aa0 189 Gene3D G3DSA:3.30.1440.10 10 188 1.7E-75 T 11-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_03010 70f68c78666c17ce0bb4d13de03b34d0 119 Pfam PF13473 Cupredoxin-like domain 14 115 5.7E-30 T 11-10-2018 IPR028096 EfeO-type cupredoxin-like domain DB34_03010 70f68c78666c17ce0bb4d13de03b34d0 119 SUPERFAMILY SSF49503 20 115 4.22E-14 T 11-10-2018 IPR008972 Cupredoxin DB34_03010 70f68c78666c17ce0bb4d13de03b34d0 119 Gene3D G3DSA:2.60.40.420 22 115 2.4E-18 T 11-10-2018 IPR008972 Cupredoxin DB34_08660 36d02f6b1df0b4564c5ece1d99dae84a 136 Gene3D G3DSA:3.90.470.10 2 136 9.4E-40 T 11-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 DB34_08660 36d02f6b1df0b4564c5ece1d99dae84a 136 ProSitePatterns PS00464 Ribosomal protein L22 signature. 95 119 - T 11-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_08660 36d02f6b1df0b4564c5ece1d99dae84a 136 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 13 122 24.412 T 11-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_08660 36d02f6b1df0b4564c5ece1d99dae84a 136 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 17 119 1.8E-28 T 11-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_08660 36d02f6b1df0b4564c5ece1d99dae84a 136 Pfam PF00237 Ribosomal protein L22p/L17e 17 119 3.8E-29 T 11-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 DB34_08660 36d02f6b1df0b4564c5ece1d99dae84a 136 SUPERFAMILY SSF54843 10 122 8.11E-37 T 11-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 DB34_13355 5db2a2737e7c0f72edea035b9ef89fb0 126 Gene3D G3DSA:1.10.260.40 62 126 1.3E-15 T 11-10-2018 DB34_13355 5db2a2737e7c0f72edea035b9ef89fb0 126 SUPERFAMILY SSF47413 54 125 4.35E-19 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DB34_13355 5db2a2737e7c0f72edea035b9ef89fb0 126 SMART SM00530 65 120 6.4E-13 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DB34_13355 5db2a2737e7c0f72edea035b9ef89fb0 126 Pfam PF01381 Helix-turn-helix 66 120 1.1E-11 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DB34_08775 fba2c2b352f5db8805d2795f84030630 269 Pfam PF00005 ABC transporter 25 169 8.1E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB34_08775 fba2c2b352f5db8805d2795f84030630 269 SUPERFAMILY SSF52540 10 235 1.6E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_08775 fba2c2b352f5db8805d2795f84030630 269 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB34_08775 fba2c2b352f5db8805d2795f84030630 269 SMART SM00382 34 218 2.9E-18 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_08775 fba2c2b352f5db8805d2795f84030630 269 Gene3D G3DSA:3.40.50.300 1 232 2.6E-64 T 11-10-2018 DB34_04180 1c9e14c6cf0774a959a5a36a7d2fd6cc 220 Pfam PF13350 Tyrosine phosphatase family 36 152 6.0E-6 T 11-10-2018 IPR026893 Tyrosine/serine-protein phosphatase IphP-type DB34_04180 1c9e14c6cf0774a959a5a36a7d2fd6cc 220 Gene3D G3DSA:3.90.190.10 28 177 9.4E-20 T 11-10-2018 IPR029021 Protein-tyrosine phosphatase-like DB34_04180 1c9e14c6cf0774a959a5a36a7d2fd6cc 220 SUPERFAMILY SSF52799 27 195 2.26E-23 T 11-10-2018 IPR029021 Protein-tyrosine phosphatase-like DB34_07945 364a6520f2cd634f74eb37454d0b198c 411 Pfam PF03969 AFG1-like ATPase 18 396 3.8E-108 T 11-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 DB34_07945 364a6520f2cd634f74eb37454d0b198c 411 SUPERFAMILY SSF52540 92 213 4.78E-12 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_07945 364a6520f2cd634f74eb37454d0b198c 411 Gene3D G3DSA:3.40.50.300 77 215 1.9E-17 T 11-10-2018 DB34_12105 e98028c9cec75d7fd2ae3202c5011174 467 SUPERFAMILY SSF53850 11 218 1.02E-28 T 11-10-2018 DB34_12105 e98028c9cec75d7fd2ae3202c5011174 467 Gene3D G3DSA:3.40.190.10 10 215 3.8E-33 T 11-10-2018 DB34_12105 e98028c9cec75d7fd2ae3202c5011174 467 SMART SM00062 2 219 4.4E-9 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DB34_12105 e98028c9cec75d7fd2ae3202c5011174 467 Gene3D G3DSA:3.40.190.10 75 179 3.8E-33 T 11-10-2018 DB34_12105 e98028c9cec75d7fd2ae3202c5011174 467 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 247 349 7.2E-16 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 DB34_12105 e98028c9cec75d7fd2ae3202c5011174 467 Gene3D G3DSA:1.10.3720.10 235 456 6.1E-45 T 11-10-2018 IPR035906 MetI-like superfamily DB34_12105 e98028c9cec75d7fd2ae3202c5011174 467 SUPERFAMILY SSF161098 248 448 3.27E-37 T 11-10-2018 IPR035906 MetI-like superfamily DB34_12105 e98028c9cec75d7fd2ae3202c5011174 467 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 272 455 8.1E-18 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB34_12105 e98028c9cec75d7fd2ae3202c5011174 467 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 11 215 3.3E-26 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DB34_10250 7a52df1a07910178a516bacf9f5dea87 272 PRINTS PR00783 Major intrinsic protein family signature 10 29 2.3E-41 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DB34_10250 7a52df1a07910178a516bacf9f5dea87 272 PRINTS PR00783 Major intrinsic protein family signature 187 209 2.3E-41 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DB34_10250 7a52df1a07910178a516bacf9f5dea87 272 PRINTS PR00783 Major intrinsic protein family signature 153 171 2.3E-41 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DB34_10250 7a52df1a07910178a516bacf9f5dea87 272 PRINTS PR00783 Major intrinsic protein family signature 235 255 2.3E-41 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DB34_10250 7a52df1a07910178a516bacf9f5dea87 272 PRINTS PR00783 Major intrinsic protein family signature 89 108 2.3E-41 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DB34_10250 7a52df1a07910178a516bacf9f5dea87 272 PRINTS PR00783 Major intrinsic protein family signature 52 76 2.3E-41 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DB34_10250 7a52df1a07910178a516bacf9f5dea87 272 SUPERFAMILY SSF81338 9 257 2.88E-61 T 11-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 DB34_10250 7a52df1a07910178a516bacf9f5dea87 272 TIGRFAM TIGR00861 MIP: MIP family channel proteins 14 252 2.9E-58 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DB34_10250 7a52df1a07910178a516bacf9f5dea87 272 ProSitePatterns PS00221 MIP family signature. 70 78 - T 11-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 DB34_10250 7a52df1a07910178a516bacf9f5dea87 272 Gene3D G3DSA:1.20.1080.10 3 260 3.0E-75 T 11-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 DB34_10250 7a52df1a07910178a516bacf9f5dea87 272 Pfam PF00230 Major intrinsic protein 7 252 1.6E-48 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DB34_05115 4f24df22c3c6a9d4d720e6bd8272799f 256 Pfam PF00535 Glycosyl transferase family 2 29 153 1.0E-27 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DB34_05115 4f24df22c3c6a9d4d720e6bd8272799f 256 SUPERFAMILY SSF53448 24 233 3.64E-49 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB34_05115 4f24df22c3c6a9d4d720e6bd8272799f 256 Gene3D G3DSA:3.90.550.10 7 249 2.7E-52 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB34_12580 6a000f22cd660c3ec5f39e58ebe89e82 315 Gene3D G3DSA:3.50.50.60 10 305 2.6E-121 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_12580 6a000f22cd660c3ec5f39e58ebe89e82 315 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 300 2.2E-51 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DB34_12580 6a000f22cd660c3ec5f39e58ebe89e82 315 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 138 158 - T 11-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 DB34_12580 6a000f22cd660c3ec5f39e58ebe89e82 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 109 117 6.0E-79 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DB34_12580 6a000f22cd660c3ec5f39e58ebe89e82 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 146 170 6.0E-79 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DB34_12580 6a000f22cd660c3ec5f39e58ebe89e82 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 6.0E-79 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DB34_12580 6a000f22cd660c3ec5f39e58ebe89e82 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 131 143 6.0E-79 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DB34_12580 6a000f22cd660c3ec5f39e58ebe89e82 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 6.0E-79 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DB34_12580 6a000f22cd660c3ec5f39e58ebe89e82 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 198 214 6.0E-79 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DB34_12580 6a000f22cd660c3ec5f39e58ebe89e82 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 239 260 6.0E-79 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DB34_12580 6a000f22cd660c3ec5f39e58ebe89e82 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 274 292 6.0E-79 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DB34_12580 6a000f22cd660c3ec5f39e58ebe89e82 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 6.0E-79 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DB34_12580 6a000f22cd660c3ec5f39e58ebe89e82 315 Gene3D G3DSA:3.50.50.60 120 245 2.6E-121 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_12580 6a000f22cd660c3ec5f39e58ebe89e82 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 108 126 9.7E-42 T 11-10-2018 DB34_12580 6a000f22cd660c3ec5f39e58ebe89e82 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 150 168 9.7E-42 T 11-10-2018 DB34_12580 6a000f22cd660c3ec5f39e58ebe89e82 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 286 9.7E-42 T 11-10-2018 DB34_12580 6a000f22cd660c3ec5f39e58ebe89e82 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 9.7E-42 T 11-10-2018 DB34_12580 6a000f22cd660c3ec5f39e58ebe89e82 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 237 253 9.7E-42 T 11-10-2018 DB34_12580 6a000f22cd660c3ec5f39e58ebe89e82 315 SUPERFAMILY SSF51905 2 311 1.36E-57 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_12580 6a000f22cd660c3ec5f39e58ebe89e82 315 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 311 4.3E-124 T 11-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 DB34_01435 54fee93d928ea2b0d1f79ebef8e0eb79 334 Gene3D G3DSA:3.10.290.10 12 80 8.9E-15 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DB34_01435 54fee93d928ea2b0d1f79ebef8e0eb79 334 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 23 329 1.6E-83 T 11-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 DB34_01435 54fee93d928ea2b0d1f79ebef8e0eb79 334 SMART SM00363 27 86 0.0063 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_01435 54fee93d928ea2b0d1f79ebef8e0eb79 334 SUPERFAMILY SSF55174 27 114 7.4E-8 T 11-10-2018 DB34_01435 54fee93d928ea2b0d1f79ebef8e0eb79 334 Pfam PF00849 RNA pseudouridylate synthase 101 258 6.2E-34 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 DB34_01435 54fee93d928ea2b0d1f79ebef8e0eb79 334 SUPERFAMILY SSF55120 90 328 1.73E-71 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DB34_01435 54fee93d928ea2b0d1f79ebef8e0eb79 334 Gene3D G3DSA:3.30.2350.10 93 332 3.2E-72 T 11-10-2018 DB34_01435 54fee93d928ea2b0d1f79ebef8e0eb79 334 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 148 162 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 DB34_10190 831f71865431095c49f33d5408c8ecc0 479 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 36 452 2.3E-86 T 11-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 DB34_10190 831f71865431095c49f33d5408c8ecc0 479 SUPERFAMILY SSF56954 2 441 2.35E-79 T 11-10-2018 DB34_10190 831f71865431095c49f33d5408c8ecc0 479 Pfam PF02321 Outer membrane efflux protein 259 439 2.2E-24 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DB34_10190 831f71865431095c49f33d5408c8ecc0 479 Pfam PF02321 Outer membrane efflux protein 38 235 1.4E-32 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DB34_10190 831f71865431095c49f33d5408c8ecc0 479 Gene3D G3DSA:1.20.1600.10 36 455 2.3E-87 T 11-10-2018 DB34_09220 f46090c25256d09af1514c7b33f350b4 389 Gene3D G3DSA:3.30.1490.20 114 187 1.4E-25 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 DB34_09220 f46090c25256d09af1514c7b33f350b4 389 Gene3D G3DSA:3.30.470.20 188 361 1.8E-64 T 11-10-2018 DB34_09220 f46090c25256d09af1514c7b33f350b4 389 Pfam PF02222 ATP-grasp domain 119 287 3.6E-54 T 11-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type DB34_09220 f46090c25256d09af1514c7b33f350b4 389 SUPERFAMILY SSF56059 109 306 3.54E-64 T 11-10-2018 DB34_09220 f46090c25256d09af1514c7b33f350b4 389 Gene3D G3DSA:3.40.50.20 6 113 2.3E-39 T 11-10-2018 DB34_09220 f46090c25256d09af1514c7b33f350b4 389 SUPERFAMILY SSF51246 311 360 5.57E-11 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 DB34_09220 f46090c25256d09af1514c7b33f350b4 389 SUPERFAMILY SSF52440 6 106 1.73E-28 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily DB34_09220 f46090c25256d09af1514c7b33f350b4 389 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 14 358 2.9E-111 T 11-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 DB34_09220 f46090c25256d09af1514c7b33f350b4 389 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 13 362 40.73 T 11-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 DB34_12515 6d9ba1999b7d273f00dfcebb958c0b4a 383 Gene3D G3DSA:2.120.10.30 28 379 1.6E-68 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like DB34_12515 6d9ba1999b7d273f00dfcebb958c0b4a 383 Pfam PF03022 Major royal jelly protein 126 211 1.5E-8 T 11-10-2018 IPR017996 Major royal jelly protein/protein yellow DB34_12515 6d9ba1999b7d273f00dfcebb958c0b4a 383 SUPERFAMILY SSF101898 63 351 3.66E-19 T 11-10-2018 DB34_04885 20ee68a85bbcb6acc7b104664ee8c1cd 298 Gene3D G3DSA:3.40.50.720 10 185 2.9E-55 T 11-10-2018 DB34_04885 20ee68a85bbcb6acc7b104664ee8c1cd 298 SUPERFAMILY SSF48179 182 293 1.59E-33 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DB34_04885 20ee68a85bbcb6acc7b104664ee8c1cd 298 Pfam PF02153 Prephenate dehydrogenase 36 280 9.3E-76 T 11-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 DB34_04885 20ee68a85bbcb6acc7b104664ee8c1cd 298 Gene3D G3DSA:1.10.3660.10 186 293 1.0E-33 T 11-10-2018 DB34_04885 20ee68a85bbcb6acc7b104664ee8c1cd 298 SUPERFAMILY SSF51735 12 178 4.63E-46 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily DB34_05865 ae2243c3cc988167e295d224a54ffa67 196 SUPERFAMILY SSF100950 32 192 4.6E-22 T 11-10-2018 IPR037171 NagB/RpiA transferase-like DB34_05865 ae2243c3cc988167e295d224a54ffa67 196 Gene3D G3DSA:3.40.50.10420 33 194 6.4E-17 T 11-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily DB34_05865 ae2243c3cc988167e295d224a54ffa67 196 Pfam PF02589 LUD domain 84 188 6.8E-7 T 11-10-2018 IPR003741 LUD domain DB34_08655 f59396922cf1b417e1c20f73eec7cd79 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 24.422 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_08655 f59396922cf1b417e1c20f73eec7cd79 92 PIRSF PIRSF002144 1 92 3.7E-34 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_08655 f59396922cf1b417e1c20f73eec7cd79 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 11-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_08655 f59396922cf1b417e1c20f73eec7cd79 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 2.5E-41 T 11-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 DB34_08655 f59396922cf1b417e1c20f73eec7cd79 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 5.8E-21 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_08655 f59396922cf1b417e1c20f73eec7cd79 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 5.8E-21 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_08655 f59396922cf1b417e1c20f73eec7cd79 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 5.8E-21 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_08655 f59396922cf1b417e1c20f73eec7cd79 92 Pfam PF00203 Ribosomal protein S19 3 83 2.9E-35 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_08655 f59396922cf1b417e1c20f73eec7cd79 92 SUPERFAMILY SSF54570 3 84 2.88E-34 T 11-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_08655 f59396922cf1b417e1c20f73eec7cd79 92 Gene3D G3DSA:3.30.860.10 1 92 4.3E-38 T 11-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_11340 948d38ac8f81284bd21f34182da7e21a 381 Pfam PF04865 Baseplate J-like protein 71 322 9.5E-33 T 11-10-2018 IPR006949 Baseplate protein J-like DB34_09435 8b819ca33b971e8d2aedf936f54f4d30 393 Gene3D G3DSA:3.40.640.10 59 291 7.7E-112 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB34_09435 8b819ca33b971e8d2aedf936f54f4d30 393 Gene3D G3DSA:3.90.1150.10 44 382 7.7E-112 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB34_09435 8b819ca33b971e8d2aedf936f54f4d30 393 SUPERFAMILY SSF53383 5 388 1.93E-94 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB34_09435 8b819ca33b971e8d2aedf936f54f4d30 393 Pfam PF00155 Aminotransferase class I and II 43 384 3.7E-50 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DB34_09435 8b819ca33b971e8d2aedf936f54f4d30 393 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 240 249 - T 11-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 DB34_07245 7065501a885a62ef3cd80fe50686301c 406 SUPERFAMILY SSF53659 1 404 2.11E-154 T 11-10-2018 DB34_07245 7065501a885a62ef3cd80fe50686301c 406 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 270 289 - T 11-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 DB34_07245 7065501a885a62ef3cd80fe50686301c 406 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 393 4.8E-73 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 DB34_07245 7065501a885a62ef3cd80fe50686301c 406 TIGRFAM TIGR00127 nadp_idh_euk: isocitrate dehydrogenase, NADP-dependent 3 404 1.7E-209 T 11-10-2018 IPR004790 Isocitrate dehydrogenase NADP-dependent GO:0004450|GO:0006102|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 DB34_07245 7065501a885a62ef3cd80fe50686301c 406 Gene3D G3DSA:3.40.718.10 1 405 8.7E-210 T 11-10-2018 DB34_07245 7065501a885a62ef3cd80fe50686301c 406 SMART SM01329 9 395 1.2E-131 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 DB34_07245 7065501a885a62ef3cd80fe50686301c 406 PIRSF PIRSF000108 1 406 3.8E-220 T 11-10-2018 IPR004790 Isocitrate dehydrogenase NADP-dependent GO:0004450|GO:0006102|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 DB34_08840 7018b5e1dc4da2c3e53bb8e882ee9df3 931 Gene3D G3DSA:3.40.50.880 338 510 8.7E-13 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like DB34_08840 7018b5e1dc4da2c3e53bb8e882ee9df3 931 TIGRFAM TIGR02226 two_anch: N-terminal double-transmembrane domain 1 80 3.2E-18 T 11-10-2018 IPR011933 Double transmembrane domain DB34_08840 7018b5e1dc4da2c3e53bb8e882ee9df3 931 Gene3D G3DSA:3.40.50.12140 691 911 9.3E-65 T 11-10-2018 DB34_08840 7018b5e1dc4da2c3e53bb8e882ee9df3 931 Pfam PF13709 Domain of unknown function (DUF4159) 696 909 2.3E-52 T 11-10-2018 IPR025297 Domain of unknown function DUF4159 DB34_08840 7018b5e1dc4da2c3e53bb8e882ee9df3 931 Pfam PF07584 Aerotolerance regulator N-terminal 1 75 1.2E-16 T 11-10-2018 IPR024163 Aerotolerance regulator, N-terminal DB34_08840 7018b5e1dc4da2c3e53bb8e882ee9df3 931 SUPERFAMILY SSF52317 356 524 7.1E-10 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like DB34_09445 186b1b170969c391321b74da8c8d7d7f 464 Gene3D G3DSA:3.40.50.300 259 458 8.7E-47 T 11-10-2018 DB34_09445 186b1b170969c391321b74da8c8d7d7f 464 Pfam PF13489 Methyltransferase domain 36 149 6.5E-16 T 11-10-2018 DB34_09445 186b1b170969c391321b74da8c8d7d7f 464 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 256 443 25.24 T 11-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 DB34_09445 186b1b170969c391321b74da8c8d7d7f 464 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 260 415 1.2E-38 T 11-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 DB34_09445 186b1b170969c391321b74da8c8d7d7f 464 Pfam PF13500 AAA domain 258 445 7.5E-51 T 11-10-2018 DB34_09445 186b1b170969c391321b74da8c8d7d7f 464 Gene3D G3DSA:3.40.50.150 9 173 2.4E-33 T 11-10-2018 DB34_09445 186b1b170969c391321b74da8c8d7d7f 464 SUPERFAMILY SSF53335 18 162 4.45E-31 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB34_09445 186b1b170969c391321b74da8c8d7d7f 464 SUPERFAMILY SSF52540 258 452 2.59E-37 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_01780 e559e468bdd313d2e85bf2ef36aed0ed 149 Gene3D G3DSA:3.30.420.270 62 131 5.7E-29 T 11-10-2018 DB34_01780 e559e468bdd313d2e85bf2ef36aed0ed 149 Pfam PF02472 Biopolymer transport protein ExbD/TolR 13 133 7.8E-30 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 DB34_01780 e559e468bdd313d2e85bf2ef36aed0ed 149 TIGRFAM TIGR02803 ExbD_1: TonB system transport protein ExbD 15 134 4.0E-58 T 11-10-2018 IPR014170 TonB system transport protein ExbD type-1 GO:0016020|GO:0055085 DB34_10885 bcafcb42cf4315b89159bd73516e5e27 837 Pfam PF00005 ABC transporter 504 757 8.4E-8 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB34_10885 bcafcb42cf4315b89159bd73516e5e27 837 SUPERFAMILY SSF52540 16 453 5.94E-28 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_10885 bcafcb42cf4315b89159bd73516e5e27 837 Gene3D G3DSA:3.40.50.300 497 833 1.5E-123 T 11-10-2018 DB34_10885 bcafcb42cf4315b89159bd73516e5e27 837 Gene3D G3DSA:3.40.50.300 16 472 3.9E-170 T 11-10-2018 DB34_10885 bcafcb42cf4315b89159bd73516e5e27 837 ProSitePatterns PS00211 ABC transporters family signature. 727 741 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB34_10885 bcafcb42cf4315b89159bd73516e5e27 837 SUPERFAMILY SSF52540 500 810 6.02E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_10885 bcafcb42cf4315b89159bd73516e5e27 837 Gene3D G3DSA:1.20.1580.10 589 727 1.5E-123 T 11-10-2018 DB34_10885 bcafcb42cf4315b89159bd73516e5e27 837 Gene3D G3DSA:1.20.1580.10 101 371 3.9E-170 T 11-10-2018 DB34_10885 bcafcb42cf4315b89159bd73516e5e27 837 Gene3D G3DSA:1.10.8.280 159 283 3.9E-170 T 11-10-2018 DB34_06520 3eb7c92679f1e6977f8486127df29f03 123 SUPERFAMILY SSF56349 4 111 2.35E-21 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DB34_06520 3eb7c92679f1e6977f8486127df29f03 123 Gene3D G3DSA:1.10.150.130 2 64 1.0E-10 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal DB34_12365 22ab71a7ec9a5869b409f32bd5fb8d96 95 SMART SM00411 5 94 2.2E-35 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DB34_12365 22ab71a7ec9a5869b409f32bd5fb8d96 95 Pfam PF00216 Bacterial DNA-binding protein 5 93 2.5E-31 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DB34_12365 22ab71a7ec9a5869b409f32bd5fb8d96 95 Gene3D G3DSA:4.10.520.10 5 95 1.1E-33 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 DB34_12365 22ab71a7ec9a5869b409f32bd5fb8d96 95 SUPERFAMILY SSF47729 5 94 6.77E-30 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 DB34_12365 22ab71a7ec9a5869b409f32bd5fb8d96 95 PRINTS PR01727 Prokaryotic integration host factor signature 44 59 1.2E-14 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DB34_12365 22ab71a7ec9a5869b409f32bd5fb8d96 95 PRINTS PR01727 Prokaryotic integration host factor signature 78 92 1.2E-14 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DB34_12365 22ab71a7ec9a5869b409f32bd5fb8d96 95 PRINTS PR01727 Prokaryotic integration host factor signature 62 75 1.2E-14 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DB34_12685 40d7ae5e100c571838296ba1d30d5f39 374 SMART SM01329 10 365 7.1E-186 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 DB34_12685 40d7ae5e100c571838296ba1d30d5f39 374 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 11 365 6.2E-140 T 11-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 DB34_12685 40d7ae5e100c571838296ba1d30d5f39 374 SUPERFAMILY SSF53659 5 371 1.17E-114 T 11-10-2018 DB34_12685 40d7ae5e100c571838296ba1d30d5f39 374 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 11 365 2.0E-127 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 DB34_12685 40d7ae5e100c571838296ba1d30d5f39 374 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 9 369 49.325 T 11-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 DB34_12685 40d7ae5e100c571838296ba1d30d5f39 374 Gene3D G3DSA:3.40.718.10 8 374 5.3E-138 T 11-10-2018 DB34_12685 40d7ae5e100c571838296ba1d30d5f39 374 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 251 270 - T 11-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 DB34_04545 2d9e4d2295a2f2547525c8db89cf3847 298 Gene3D G3DSA:3.40.50.80 141 294 9.6E-41 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DB34_04545 2d9e4d2295a2f2547525c8db89cf3847 298 Pfam PF00970 Oxidoreductase FAD-binding domain 59 132 1.2E-7 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 DB34_04545 2d9e4d2295a2f2547525c8db89cf3847 298 Pfam PF00175 Oxidoreductase NAD-binding domain 153 269 4.7E-5 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 DB34_04545 2d9e4d2295a2f2547525c8db89cf3847 298 Gene3D G3DSA:2.40.30.10 38 137 2.3E-27 T 11-10-2018 DB34_04545 2d9e4d2295a2f2547525c8db89cf3847 298 SUPERFAMILY SSF63380 45 140 3.05E-25 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel DB34_04545 2d9e4d2295a2f2547525c8db89cf3847 298 SUPERFAMILY SSF52343 144 295 7.07E-37 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DB34_03675 736f51fbfb177529a3bc6a52f7e546dd 844 SUPERFAMILY SSF50182 629 686 8.5E-12 T 11-10-2018 IPR010920 LSM domain superfamily DB34_03675 736f51fbfb177529a3bc6a52f7e546dd 844 SUPERFAMILY SSF82689 698 790 2.62E-5 T 11-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 DB34_03675 736f51fbfb177529a3bc6a52f7e546dd 844 Gene3D G3DSA:3.30.70.100 696 784 1.3E-13 T 11-10-2018 DB34_03675 736f51fbfb177529a3bc6a52f7e546dd 844 Gene3D G3DSA:2.30.30.60 645 693 2.5E-15 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily DB34_03675 736f51fbfb177529a3bc6a52f7e546dd 844 Pfam PF00924 Mechanosensitive ion channel 586 785 1.9E-36 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 DB34_03675 736f51fbfb177529a3bc6a52f7e546dd 844 SUPERFAMILY SSF82861 548 627 1.06E-10 T 11-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 DB34_00580 4d1a8a5d632449aded273a70ef0f6d4e 376 SUPERFAMILY SSF53187 56 367 1.12E-49 T 11-10-2018 DB34_00580 4d1a8a5d632449aded273a70ef0f6d4e 376 Gene3D G3DSA:3.40.630.10 72 374 1.4E-54 T 11-10-2018 DB34_00580 4d1a8a5d632449aded273a70ef0f6d4e 376 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 88 307 9.7E-13 T 11-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 DB34_03220 a8f79a2bd6c1f0c148287793554084c5 403 Gene3D G3DSA:1.10.443.10 219 395 6.0E-15 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 DB34_03220 a8f79a2bd6c1f0c148287793554084c5 403 Pfam PF13356 Arm DNA-binding domain 9 90 6.6E-12 T 11-10-2018 IPR025166 Integrase, DNA-binding domain DB34_03220 a8f79a2bd6c1f0c148287793554084c5 403 Pfam PF00589 Phage integrase family 225 355 4.8E-14 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 DB34_03220 a8f79a2bd6c1f0c148287793554084c5 403 Gene3D G3DSA:1.10.150.130 105 185 1.1E-29 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal DB34_03220 a8f79a2bd6c1f0c148287793554084c5 403 Gene3D G3DSA:3.30.160.390 7 104 1.0E-15 T 11-10-2018 IPR038488 Integrase, DNA-binding domain superfamily DB34_03220 a8f79a2bd6c1f0c148287793554084c5 403 SUPERFAMILY SSF56349 101 394 3.36E-48 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DB34_12065 e6d7bc752fab71714ed9c89a8bb6930e 356 SUPERFAMILY SSF50129 12 174 1.12E-46 T 11-10-2018 IPR011032 GroES-like superfamily DB34_12065 e6d7bc752fab71714ed9c89a8bb6930e 356 Gene3D G3DSA:3.90.180.10 13 345 2.8E-135 T 11-10-2018 DB34_12065 e6d7bc752fab71714ed9c89a8bb6930e 356 Gene3D G3DSA:3.40.50.720 163 317 2.8E-135 T 11-10-2018 DB34_12065 e6d7bc752fab71714ed9c89a8bb6930e 356 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 11-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 DB34_12065 e6d7bc752fab71714ed9c89a8bb6930e 356 SUPERFAMILY SSF51735 152 315 1.52E-42 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily DB34_12065 e6d7bc752fab71714ed9c89a8bb6930e 356 SMART SM00829 9 345 8.2E-5 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 DB34_12065 e6d7bc752fab71714ed9c89a8bb6930e 356 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 182 210 - T 11-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 DB34_12065 e6d7bc752fab71714ed9c89a8bb6930e 356 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 147 7.4E-26 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DB34_12065 e6d7bc752fab71714ed9c89a8bb6930e 356 Pfam PF00107 Zinc-binding dehydrogenase 189 310 9.3E-23 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DB34_01130 93452c944bf0030c486450f25af29ea1 149 Pfam PF00364 Biotin-requiring enzyme 76 148 4.8E-14 T 11-10-2018 IPR000089 Biotin/lipoyl attachment DB34_01130 93452c944bf0030c486450f25af29ea1 149 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 95 109 5.4E-9 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 DB34_01130 93452c944bf0030c486450f25af29ea1 149 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 78 91 5.4E-9 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 DB34_01130 93452c944bf0030c486450f25af29ea1 149 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 110 123 5.4E-9 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 DB34_01130 93452c944bf0030c486450f25af29ea1 149 Gene3D G3DSA:2.40.50.100 72 148 1.1E-22 T 11-10-2018 DB34_01130 93452c944bf0030c486450f25af29ea1 149 SUPERFAMILY SSF51230 74 148 3.53E-18 T 11-10-2018 IPR011053 Single hybrid motif DB34_01975 a5280f7d9758f72715b0263bf94117dd 346 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 22 318 5.1E-69 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme DB34_01975 a5280f7d9758f72715b0263bf94117dd 346 SUPERFAMILY SSF53686 20 338 5.5E-92 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DB34_01975 a5280f7d9758f72715b0263bf94117dd 346 Gene3D G3DSA:3.40.50.1100 23 326 4.8E-110 T 11-10-2018 DB34_01975 a5280f7d9758f72715b0263bf94117dd 346 Gene3D G3DSA:3.40.50.1100 54 165 4.8E-110 T 11-10-2018 DB34_01975 a5280f7d9758f72715b0263bf94117dd 346 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 46 64 - T 11-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 DB34_12675 690bb807c238b3f31f58f03b071e2d98 174 Pfam PF01327 Polypeptide deformylase 5 161 1.9E-46 T 11-10-2018 IPR023635 Peptide deformylase DB34_12675 690bb807c238b3f31f58f03b071e2d98 174 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 6 168 6.6E-33 T 11-10-2018 IPR023635 Peptide deformylase DB34_12675 690bb807c238b3f31f58f03b071e2d98 174 Gene3D G3DSA:3.90.45.10 1 173 3.6E-56 T 11-10-2018 IPR036821 Peptide deformylase superfamily DB34_12675 690bb807c238b3f31f58f03b071e2d98 174 SUPERFAMILY SSF56420 1 169 2.22E-51 T 11-10-2018 IPR036821 Peptide deformylase superfamily DB34_12675 690bb807c238b3f31f58f03b071e2d98 174 PRINTS PR01576 Peptide deformylase signature 111 129 1.5E-27 T 11-10-2018 IPR023635 Peptide deformylase DB34_12675 690bb807c238b3f31f58f03b071e2d98 174 PRINTS PR01576 Peptide deformylase signature 130 159 1.5E-27 T 11-10-2018 IPR023635 Peptide deformylase DB34_12675 690bb807c238b3f31f58f03b071e2d98 174 PRINTS PR01576 Peptide deformylase signature 99 110 1.5E-27 T 11-10-2018 IPR023635 Peptide deformylase DB34_12675 690bb807c238b3f31f58f03b071e2d98 174 PRINTS PR01576 Peptide deformylase signature 34 63 1.5E-27 T 11-10-2018 IPR023635 Peptide deformylase DB34_12675 690bb807c238b3f31f58f03b071e2d98 174 PIRSF PIRSF004749 1 174 1.3E-47 T 11-10-2018 IPR023635 Peptide deformylase DB34_12675 690bb807c238b3f31f58f03b071e2d98 174 Hamap MF_00163 Peptide deformylase [def]. 2 172 25.809 T 11-10-2018 IPR023635 Peptide deformylase DB34_10090 b46140b629befa3757910f12238e8496 513 Pfam PF00425 chorismate binding enzyme 239 493 2.4E-95 T 11-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal DB34_10090 b46140b629befa3757910f12238e8496 513 Gene3D G3DSA:3.60.120.10 2 511 1.6E-169 T 11-10-2018 IPR005801 ADC synthase GO:0009058 DB34_10090 b46140b629befa3757910f12238e8496 513 SUPERFAMILY SSF56322 29 502 1.23E-149 T 11-10-2018 IPR005801 ADC synthase GO:0009058 DB34_10090 b46140b629befa3757910f12238e8496 513 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 34 501 9.2E-164 T 11-10-2018 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DB34_10090 b46140b629befa3757910f12238e8496 513 PRINTS PR00095 Anthranilate synthase component I signature 435 449 7.9E-21 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DB34_10090 b46140b629befa3757910f12238e8496 513 PRINTS PR00095 Anthranilate synthase component I signature 450 464 7.9E-21 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DB34_10090 b46140b629befa3757910f12238e8496 513 PRINTS PR00095 Anthranilate synthase component I signature 355 368 7.9E-21 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DB34_10090 b46140b629befa3757910f12238e8496 513 PRINTS PR00095 Anthranilate synthase component I signature 341 354 7.9E-21 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DB34_10090 b46140b629befa3757910f12238e8496 513 Pfam PF04715 Anthranilate synthase component I, N terminal region 35 183 6.7E-29 T 11-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DB34_02555 b66c1b7c8e930e57f7dcbab97ae01223 921 SUPERFAMILY SSF56719 38 519 1.31E-175 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 DB34_02555 b66c1b7c8e930e57f7dcbab97ae01223 921 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 40 503 8.6E-157 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DB34_02555 b66c1b7c8e930e57f7dcbab97ae01223 921 Gene3D G3DSA:3.30.1360.40 244 340 1.6E-219 T 11-10-2018 DB34_02555 b66c1b7c8e930e57f7dcbab97ae01223 921 SMART SM00434 19 497 8.8E-277 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DB34_02555 b66c1b7c8e930e57f7dcbab97ae01223 921 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 13 909 23.374 T 11-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DB34_02555 b66c1b7c8e930e57f7dcbab97ae01223 921 SUPERFAMILY SSF101904 531 917 1.7E-86 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal DB34_02555 b66c1b7c8e930e57f7dcbab97ae01223 921 Gene3D G3DSA:2.120.10.90 529 771 3.2E-67 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal DB34_02555 b66c1b7c8e930e57f7dcbab97ae01223 921 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 17 905 0.0 T 11-10-2018 DB34_02555 b66c1b7c8e930e57f7dcbab97ae01223 921 Gene3D G3DSA:3.90.199.10 41 519 1.6E-219 T 11-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 DB34_02555 b66c1b7c8e930e57f7dcbab97ae01223 921 Gene3D G3DSA:1.10.268.10 377 491 1.6E-219 T 11-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 DB34_02555 b66c1b7c8e930e57f7dcbab97ae01223 921 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 537 577 2.4E-9 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DB34_02555 b66c1b7c8e930e57f7dcbab97ae01223 921 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 587 635 9.2E-7 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DB34_02555 b66c1b7c8e930e57f7dcbab97ae01223 921 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 693 743 1.9E-9 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DB34_02555 b66c1b7c8e930e57f7dcbab97ae01223 921 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 862 907 5.0E-13 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DB34_02555 b66c1b7c8e930e57f7dcbab97ae01223 921 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 809 844 3.1E-7 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DB34_02555 b66c1b7c8e930e57f7dcbab97ae01223 921 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 646 689 5.8E-9 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DB34_02555 b66c1b7c8e930e57f7dcbab97ae01223 921 Gene3D G3DSA:2.120.10.90 789 908 4.4E-22 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal DB34_08700 adf2ae7a96b73be4b238eea8e2700f24 101 Gene3D G3DSA:4.10.830.10 43 101 4.5E-23 T 11-10-2018 DB34_08700 adf2ae7a96b73be4b238eea8e2700f24 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 11-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_08700 adf2ae7a96b73be4b238eea8e2700f24 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 24.208 T 11-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid DB34_08700 adf2ae7a96b73be4b238eea8e2700f24 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 7.8E-25 T 11-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_08700 adf2ae7a96b73be4b238eea8e2700f24 101 SUPERFAMILY SSF57716 2 101 2.19E-33 T 11-10-2018 DB34_00880 5f04d57cd8d0a09821c50d66c487e77a 61 SUPERFAMILY SSF57716 5 56 4.85E-17 T 11-10-2018 DB34_00880 5f04d57cd8d0a09821c50d66c487e77a 61 Pfam PF03884 DNA gyrase inhibitor YacG 7 51 1.3E-17 T 11-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 DB34_00880 5f04d57cd8d0a09821c50d66c487e77a 61 Gene3D G3DSA:3.30.50.10 2 60 1.7E-19 T 11-10-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 Reactome: R-HSA-383280 DB34_00880 5f04d57cd8d0a09821c50d66c487e77a 61 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 2 60 17.306 T 11-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 DB34_01120 085ca25d10f2d0c1f51590b1eea8b9ca 233 Gene3D G3DSA:2.40.100.10 102 232 3.1E-43 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily DB34_01120 085ca25d10f2d0c1f51590b1eea8b9ca 233 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 25 226 1.8E-48 T 11-10-2018 IPR010016 KipI family KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 DB34_01120 085ca25d10f2d0c1f51590b1eea8b9ca 233 SUPERFAMILY SSF160467 21 106 9.55E-9 T 11-10-2018 DB34_01120 085ca25d10f2d0c1f51590b1eea8b9ca 233 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 21 217 4.4E-55 T 11-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D DB34_01120 085ca25d10f2d0c1f51590b1eea8b9ca 233 SUPERFAMILY SSF50891 105 231 1.1E-36 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily DB34_01120 085ca25d10f2d0c1f51590b1eea8b9ca 233 SMART SM00796 20 218 2.4E-79 T 11-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D DB34_07520 a8ff0108cd4afc3550e9ed3c1a41167f 257 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 230 252 1.1E-5 T 11-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal DB34_07520 a8ff0108cd4afc3550e9ed3c1a41167f 257 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB34_07520 a8ff0108cd4afc3550e9ed3c1a41167f 257 Pfam PF00005 ABC transporter 36 181 1.4E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB34_07520 a8ff0108cd4afc3550e9ed3c1a41167f 257 SMART SM00382 45 238 7.8E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_07520 a8ff0108cd4afc3550e9ed3c1a41167f 257 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 21 257 1.8E-111 T 11-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 DB34_07520 a8ff0108cd4afc3550e9ed3c1a41167f 257 SUPERFAMILY SSF52540 21 252 1.66E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_07520 a8ff0108cd4afc3550e9ed3c1a41167f 257 Gene3D G3DSA:3.40.50.300 20 257 1.1E-65 T 11-10-2018 DB34_06910 39a25bfa05b777a009e3e473d02d2058 420 Pfam PF00999 Sodium/hydrogen exchanger family 13 411 1.9E-47 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 DB34_02105 7c6ddbc961702601819dececf48f5aca 248 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 16 236 1.1E-67 T 11-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 DB34_02105 7c6ddbc961702601819dececf48f5aca 248 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 20 243 1.4E-62 T 11-10-2018 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 DB34_02105 7c6ddbc961702601819dececf48f5aca 248 Gene3D G3DSA:3.40.50.1360 10 245 2.3E-74 T 11-10-2018 DB34_02105 7c6ddbc961702601819dececf48f5aca 248 SUPERFAMILY SSF100950 12 244 2.87E-66 T 11-10-2018 IPR037171 NagB/RpiA transferase-like DB34_08790 dd3fd859a30a383ed05ce2cbc5b1fc17 521 SUPERFAMILY SSF56954 8 496 5.1E-99 T 11-10-2018 DB34_08790 dd3fd859a30a383ed05ce2cbc5b1fc17 521 Gene3D G3DSA:2.20.200.10 119 382 8.0E-116 T 11-10-2018 DB34_08790 dd3fd859a30a383ed05ce2cbc5b1fc17 521 Gene3D G3DSA:1.20.1600.10 72 494 8.0E-116 T 11-10-2018 DB34_08790 dd3fd859a30a383ed05ce2cbc5b1fc17 521 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 24 493 1.2E-114 T 11-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 DB34_08790 dd3fd859a30a383ed05ce2cbc5b1fc17 521 Pfam PF02321 Outer membrane efflux protein 310 490 1.7E-19 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DB34_08790 dd3fd859a30a383ed05ce2cbc5b1fc17 521 Pfam PF02321 Outer membrane efflux protein 82 284 3.5E-26 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DB34_09380 616cc9ac633c8d3840ea581a64b364fb 363 SMART SM00563 113 243 1.5E-24 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 DB34_09380 616cc9ac633c8d3840ea581a64b364fb 363 SUPERFAMILY SSF69593 61 304 1.18E-24 T 11-10-2018 DB34_09380 616cc9ac633c8d3840ea581a64b364fb 363 Pfam PF01553 Acyltransferase 108 210 4.1E-20 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 DB34_04360 f2f0d7743929e93659d9bfb83d1c6648 139 Pfam PF02472 Biopolymer transport protein ExbD/TolR 16 137 2.2E-26 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 DB34_04360 f2f0d7743929e93659d9bfb83d1c6648 139 Gene3D G3DSA:3.30.420.270 64 132 9.9E-9 T 11-10-2018 DB34_01080 f2f0d7743929e93659d9bfb83d1c6648 139 Pfam PF02472 Biopolymer transport protein ExbD/TolR 16 137 2.2E-26 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 DB34_01080 f2f0d7743929e93659d9bfb83d1c6648 139 Gene3D G3DSA:3.30.420.270 64 132 9.9E-9 T 11-10-2018 DB34_09020 43d0177cd770f72950c10e0fb17233cb 222 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 78 1.8E-21 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 DB34_09020 43d0177cd770f72950c10e0fb17233cb 222 Pfam PF00043 Glutathione S-transferase, C-terminal domain 140 198 1.0E-6 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal DB34_09020 43d0177cd770f72950c10e0fb17233cb 222 SUPERFAMILY SSF47616 70 215 1.64E-27 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DB34_09020 43d0177cd770f72950c10e0fb17233cb 222 SUPERFAMILY SSF52833 1 102 2.16E-24 T 11-10-2018 IPR036249 Thioredoxin-like superfamily DB34_09020 43d0177cd770f72950c10e0fb17233cb 222 Gene3D G3DSA:1.20.1050.10 79 197 1.8E-83 T 11-10-2018 DB34_09020 43d0177cd770f72950c10e0fb17233cb 222 Gene3D G3DSA:3.40.30.10 4 222 1.8E-83 T 11-10-2018 DB34_01085 507618ad370d5c0ba23e88394c7df28f 330 Pfam PF01618 MotA/TolQ/ExbB proton channel family 187 286 1.7E-31 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel DB34_04355 507618ad370d5c0ba23e88394c7df28f 330 Pfam PF01618 MotA/TolQ/ExbB proton channel family 187 286 1.7E-31 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel DB34_04025 1442cc79a680bf2116c6daf5023282eb 61 SUPERFAMILY SSF158997 7 60 1.83E-20 T 11-10-2018 DB34_04025 1442cc79a680bf2116c6daf5023282eb 61 Gene3D G3DSA:2.20.25.10 14 61 3.1E-24 T 11-10-2018 DB34_04025 1442cc79a680bf2116c6daf5023282eb 61 Pfam PF03966 Trm112p-like protein 8 47 2.5E-9 T 11-10-2018 IPR005651 Trm112-like DB34_04025 1442cc79a680bf2116c6daf5023282eb 61 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 7 60 26.76 T 11-10-2018 IPR038053 Uncharacterised protein family UPF0434 DB34_02000 375f9a14c8016d9d566828cf92d34728 418 SUPERFAMILY SSF53955 37 189 3.87E-34 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily DB34_02000 375f9a14c8016d9d566828cf92d34728 418 Pfam PF01464 Transglycosylase SLT domain 66 172 1.7E-20 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 DB34_02000 375f9a14c8016d9d566828cf92d34728 418 Gene3D G3DSA:1.10.530.10 59 196 1.4E-35 T 11-10-2018 DB34_00005 eae153737cbaa94e0593954c5a8fa16c 64 Pfam PF13701 Transposase DDE domain group 1 13 63 6.0E-14 T 11-10-2018 IPR025668 Transposase DDE domain DB34_04850 e6e548fa9f39fc99357d19da091b3e9f 656 TIGRFAM TIGR01507 hopene_cyclase: squalene-hopene cyclase 18 646 5.2E-234 T 11-10-2018 IPR006400 Squalene hopene cyclase GO:0016866|GO:0019746 KEGG: 00909+4.2.1.129+5.4.99.17|MetaCyc: PWY-6098|MetaCyc: PWY-7072 DB34_04850 e6e548fa9f39fc99357d19da091b3e9f 656 SUPERFAMILY SSF48239 47 316 4.71E-69 T 11-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid DB34_04850 e6e548fa9f39fc99357d19da091b3e9f 656 Gene3D G3DSA:1.50.10.20 43 319 1.2E-223 T 11-10-2018 DB34_04850 e6e548fa9f39fc99357d19da091b3e9f 656 Gene3D G3DSA:1.50.10.20 26 641 1.2E-223 T 11-10-2018 DB34_04850 e6e548fa9f39fc99357d19da091b3e9f 656 Pfam PF13249 Squalene-hopene cyclase N-terminal domain 24 312 1.5E-110 T 11-10-2018 IPR032697 Squalene cyclase, N-terminal Reactome: R-HSA-191273|Reactome: R-HSA-2426168 DB34_04850 e6e548fa9f39fc99357d19da091b3e9f 656 Pfam PF13243 Squalene-hopene cyclase C-terminal domain 320 643 2.1E-140 T 11-10-2018 IPR032696 Squalene cyclase, C-terminal Reactome: R-HSA-191273|Reactome: R-HSA-2426168 DB34_04850 e6e548fa9f39fc99357d19da091b3e9f 656 TIGRFAM TIGR01787 squalene_cyclas: squalene/oxidosqualene cyclases 22 643 1.1E-181 T 11-10-2018 IPR018333 Squalene cyclase GO:0016866 Reactome: R-HSA-191273|Reactome: R-HSA-2426168 DB34_04850 e6e548fa9f39fc99357d19da091b3e9f 656 SUPERFAMILY SSF48239 248 643 2.83E-104 T 11-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid DB34_01530 8e5f3f92d3470e56e9b9fae246ed376a 129 SUPERFAMILY SSF55331 2 128 3.76E-37 T 11-10-2018 IPR014347 Tautomerase/MIF superfamily DB34_01530 8e5f3f92d3470e56e9b9fae246ed376a 129 Pfam PF14552 Tautomerase enzyme 38 118 1.2E-29 T 11-10-2018 IPR037479 Tautomerase, MSAD family DB34_01530 8e5f3f92d3470e56e9b9fae246ed376a 129 Gene3D G3DSA:3.30.429.10 1 129 5.2E-46 T 11-10-2018 IPR014347 Tautomerase/MIF superfamily DB34_09505 cdebadcafbfd222ba178ac5ebd9520c2 109 Gene3D G3DSA:1.10.150.250 21 101 8.6E-20 T 11-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily DB34_09505 cdebadcafbfd222ba178ac5ebd9520c2 109 Pfam PF03937 Flavinator of succinate dehydrogenase 28 99 6.4E-22 T 11-10-2018 IPR005631 Flavinator of succinate dehydrogenase DB34_09505 cdebadcafbfd222ba178ac5ebd9520c2 109 SUPERFAMILY SSF109910 23 100 1.7E-19 T 11-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily DB34_12115 8d2da39d2f2f21ce207a68c80dbb83d4 757 Gene3D G3DSA:2.40.170.20 83 757 1.2E-96 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DB34_12115 8d2da39d2f2f21ce207a68c80dbb83d4 757 SUPERFAMILY SSF56935 89 757 6.59E-77 T 11-10-2018 DB34_12115 8d2da39d2f2f21ce207a68c80dbb83d4 757 Pfam PF00593 TonB dependent receptor 321 747 2.8E-23 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel DB34_12115 8d2da39d2f2f21ce207a68c80dbb83d4 757 Pfam PF07715 TonB-dependent Receptor Plug Domain 92 198 1.4E-9 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain DB34_00870 b309c06b678e285afb50c190764159cb 210 TIGRFAM TIGR00172 maf: septum formation protein Maf 17 202 3.3E-43 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 DB34_00870 b309c06b678e285afb50c190764159cb 210 PIRSF PIRSF006305 11 206 4.3E-46 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 DB34_00870 b309c06b678e285afb50c190764159cb 210 Gene3D G3DSA:3.90.950.10 15 206 5.9E-54 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like DB34_00870 b309c06b678e285afb50c190764159cb 210 Pfam PF02545 Maf-like protein 17 202 3.8E-46 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 DB34_00870 b309c06b678e285afb50c190764159cb 210 SUPERFAMILY SSF52972 15 202 2.55E-52 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like DB34_00870 b309c06b678e285afb50c190764159cb 210 Hamap MF_00528 Septum formation protein Maf [maf]. 16 208 27.973 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 DB34_02855 2573e6f5cf3e39eda90e8d2eb7be75d9 550 Pfam PF05683 Fumarase C-terminus 344 549 7.3E-91 T 11-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 DB34_02855 2573e6f5cf3e39eda90e8d2eb7be75d9 550 SUPERFAMILY SSF117457 373 547 2.88E-60 T 11-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 DB34_02855 2573e6f5cf3e39eda90e8d2eb7be75d9 550 PIRSF PIRSF001394 37 550 1.4E-207 T 11-10-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 DB34_02855 2573e6f5cf3e39eda90e8d2eb7be75d9 550 Gene3D G3DSA:3.20.130.10 360 548 1.5E-57 T 11-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 DB34_02855 2573e6f5cf3e39eda90e8d2eb7be75d9 550 Pfam PF05681 Fumarate hydratase (Fumerase) 56 338 5.0E-84 T 11-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 DB34_02855 2573e6f5cf3e39eda90e8d2eb7be75d9 550 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 385 549 1.2E-56 T 11-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 DB34_07505 41e83c71e671be1125a80c4565c313c3 206 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 94 1.4E-17 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 DB34_07505 41e83c71e671be1125a80c4565c313c3 206 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 148 199 1.7E-15 T 11-10-2018 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal DB34_07505 41e83c71e671be1125a80c4565c313c3 206 Gene3D G3DSA:3.30.505.50 159 204 9.0E-14 T 11-10-2018 IPR038416 Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily DB34_07505 41e83c71e671be1125a80c4565c313c3 206 SUPERFAMILY SSF69754 1 100 1.14E-21 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like DB34_07505 41e83c71e671be1125a80c4565c313c3 206 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 100 9.2E-17 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 DB34_07505 41e83c71e671be1125a80c4565c313c3 206 Gene3D G3DSA:3.30.160.100 1 107 2.0E-16 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like DB34_07505 41e83c71e671be1125a80c4565c313c3 206 Hamap MF_00839 Ribosome hibernation promoting factor [hpf]. 1 204 20.158 T 11-10-2018 IPR034694 Ribosome hibernation promoting factor, long/plastid DB34_08235 1152bc9db6bc8696e186fd5e21c2335b 208 SUPERFAMILY SSF48498 89 196 9.64E-20 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DB34_08235 1152bc9db6bc8696e186fd5e21c2335b 208 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 64 5.8E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB34_08235 1152bc9db6bc8696e186fd5e21c2335b 208 Gene3D G3DSA:1.10.357.10 3 202 4.8E-55 T 11-10-2018 DB34_08235 1152bc9db6bc8696e186fd5e21c2335b 208 Pfam PF13305 WHG domain 95 177 4.6E-17 T 11-10-2018 IPR025996 WHG domain DB34_08235 1152bc9db6bc8696e186fd5e21c2335b 208 SUPERFAMILY SSF46689 7 79 4.19E-14 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB34_04010 9be99a60178d6eb7e31608de0e50fc15 175 Pfam PF07813 LTXXQ motif family protein 57 148 1.2E-7 T 11-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 DB34_04010 9be99a60178d6eb7e31608de0e50fc15 175 Gene3D G3DSA:1.20.120.1490 41 155 6.5E-15 T 11-10-2018 DB34_12230 3e05d601f4a1f2dab2d9bda0fba71b38 458 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 276 310 3.5E-4 T 11-10-2018 IPR001451 Hexapeptide repeat DB34_12230 3e05d601f4a1f2dab2d9bda0fba71b38 458 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 312 345 1.5E-4 T 11-10-2018 IPR001451 Hexapeptide repeat DB34_12230 3e05d601f4a1f2dab2d9bda0fba71b38 458 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 397 425 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 DB34_12230 3e05d601f4a1f2dab2d9bda0fba71b38 458 Gene3D G3DSA:2.160.10.10 239 449 9.9E-58 T 11-10-2018 DB34_12230 3e05d601f4a1f2dab2d9bda0fba71b38 458 Gene3D G3DSA:3.90.550.10 19 238 7.8E-57 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB34_12230 3e05d601f4a1f2dab2d9bda0fba71b38 458 Pfam PF12804 MobA-like NTP transferase domain 22 135 2.0E-21 T 11-10-2018 IPR025877 MobA-like NTP transferase DB34_12230 3e05d601f4a1f2dab2d9bda0fba71b38 458 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 22 444 7.9E-146 T 11-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 DB34_12230 3e05d601f4a1f2dab2d9bda0fba71b38 458 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 389 423 3.4E-9 T 11-10-2018 IPR001451 Hexapeptide repeat DB34_12230 3e05d601f4a1f2dab2d9bda0fba71b38 458 SUPERFAMILY SSF53448 21 263 1.25E-56 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB34_12230 3e05d601f4a1f2dab2d9bda0fba71b38 458 SUPERFAMILY SSF51161 255 440 5.02E-48 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily DB34_12230 3e05d601f4a1f2dab2d9bda0fba71b38 458 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 19 446 36.677 T 11-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 DB34_08720 015d0a9f34b1be7a17c6edb1af555e81 191 SUPERFAMILY SSF54768 19 87 9.0E-23 T 11-10-2018 DB34_08720 015d0a9f34b1be7a17c6edb1af555e81 191 Pfam PF00333 Ribosomal protein S5, N-terminal domain 22 86 6.2E-28 T 11-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 DB34_08720 015d0a9f34b1be7a17c6edb1af555e81 191 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 21 174 3.6E-64 T 11-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 DB34_08720 015d0a9f34b1be7a17c6edb1af555e81 191 Gene3D G3DSA:3.30.160.20 13 84 3.7E-29 T 11-10-2018 DB34_08720 015d0a9f34b1be7a17c6edb1af555e81 191 Pfam PF03719 Ribosomal protein S5, C-terminal domain 99 169 7.9E-29 T 11-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 DB34_08720 015d0a9f34b1be7a17c6edb1af555e81 191 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 175 35.678 T 11-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 DB34_08720 015d0a9f34b1be7a17c6edb1af555e81 191 SUPERFAMILY SSF54211 91 171 8.6E-25 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DB34_08720 015d0a9f34b1be7a17c6edb1af555e81 191 Gene3D G3DSA:3.30.230.10 86 179 1.4E-33 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DB34_08720 015d0a9f34b1be7a17c6edb1af555e81 191 ProSitePatterns PS00585 Ribosomal protein S5 signature. 39 71 - T 11-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site DB34_07730 2730ea2881c25b5f16cc0a759a52c07f 333 Gene3D G3DSA:3.90.870.10 3 210 2.1E-69 T 11-10-2018 DB34_07730 2730ea2881c25b5f16cc0a759a52c07f 333 Pfam PF01300 Telomere recombination 18 195 3.1E-49 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 DB34_07730 2730ea2881c25b5f16cc0a759a52c07f 333 PIRSF PIRSF004930 2 325 7.0E-99 T 11-10-2018 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 DB34_07730 2730ea2881c25b5f16cc0a759a52c07f 333 Pfam PF03481 Putative GTP-binding controlling metal-binding 197 321 1.9E-19 T 11-10-2018 IPR005145 Putative GTP-binding controlling metal-binding domain DB34_07730 2730ea2881c25b5f16cc0a759a52c07f 333 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 6 205 1.4E-49 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 DB34_07730 2730ea2881c25b5f16cc0a759a52c07f 333 SUPERFAMILY SSF55821 7 207 5.19E-57 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily DB34_07730 2730ea2881c25b5f16cc0a759a52c07f 333 Gene3D G3DSA:3.40.50.11030 211 325 1.6E-12 T 11-10-2018 IPR038385 Threonylcarbamoyl-AMP synthase, C-terminal domain superfamily DB34_06615 8abca2c37c4efed50c1a9cb3e1f05926 274 Pfam PF03724 META domain 142 269 3.7E-15 T 11-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ DB34_06615 8abca2c37c4efed50c1a9cb3e1f05926 274 Gene3D G3DSA:2.40.128.270 140 273 1.3E-11 T 11-10-2018 IPR038670 HslJ-like superfamily DB34_08055 7686ca4480501fc232d525438393e21d 596 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 238 587 2.6E-109 T 11-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 DB34_08055 7686ca4480501fc232d525438393e21d 596 SUPERFAMILY SSF56796 229 590 1.7E-108 T 11-10-2018 DB34_08055 7686ca4480501fc232d525438393e21d 596 ProSitePatterns PS01128 Shikimate kinase signature. 112 137 - T 11-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 DB34_08055 7686ca4480501fc232d525438393e21d 596 Gene3D G3DSA:3.40.50.1970 225 398 1.4E-63 T 11-10-2018 DB34_08055 7686ca4480501fc232d525438393e21d 596 Pfam PF01761 3-dehydroquinate synthase 294 558 2.5E-95 T 11-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 DB34_08055 7686ca4480501fc232d525438393e21d 596 Gene3D G3DSA:3.40.50.300 56 224 1.7E-50 T 11-10-2018 DB34_08055 7686ca4480501fc232d525438393e21d 596 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 226 589 66.388 T 11-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 DB34_08055 7686ca4480501fc232d525438393e21d 596 Pfam PF01202 Shikimate kinase 65 220 3.2E-44 T 11-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 DB34_08055 7686ca4480501fc232d525438393e21d 596 Hamap MF_00109 Shikimate kinase [aroK]. 56 221 27.782 T 11-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 DB34_08055 7686ca4480501fc232d525438393e21d 596 Gene3D G3DSA:1.20.1090.10 399 593 6.6E-58 T 11-10-2018 DB34_08055 7686ca4480501fc232d525438393e21d 596 SUPERFAMILY SSF52540 56 220 3.08E-28 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_08055 7686ca4480501fc232d525438393e21d 596 PRINTS PR01100 Shikimate kinase family signature 83 96 1.5E-18 T 11-10-2018 DB34_08055 7686ca4480501fc232d525438393e21d 596 PRINTS PR01100 Shikimate kinase family signature 111 119 1.5E-18 T 11-10-2018 DB34_08055 7686ca4480501fc232d525438393e21d 596 PRINTS PR01100 Shikimate kinase family signature 150 167 1.5E-18 T 11-10-2018 DB34_08055 7686ca4480501fc232d525438393e21d 596 PRINTS PR01100 Shikimate kinase family signature 59 74 1.5E-18 T 11-10-2018 DB34_08055 7686ca4480501fc232d525438393e21d 596 PRINTS PR01100 Shikimate kinase family signature 129 138 1.5E-18 T 11-10-2018 DB34_08510 d43f048368be236c3bc9ab75f658c900 1087 Pfam PF13502 AsmA-like C-terminal region 898 1068 4.4E-8 T 11-10-2018 IPR032712 AsmA-like, C-terminal DB34_06375 c60f447f9093fd9dc287dc3793baa577 404 Pfam PF05065 Phage capsid family 124 395 6.8E-57 T 11-10-2018 IPR024455 Phage capsid DB34_06375 c60f447f9093fd9dc287dc3793baa577 404 Gene3D G3DSA:3.30.2400.10 151 385 1.3E-89 T 11-10-2018 DB34_06375 c60f447f9093fd9dc287dc3793baa577 404 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 12 395 3.6E-51 T 11-10-2018 IPR024455 Phage capsid DB34_06375 c60f447f9093fd9dc287dc3793baa577 404 SUPERFAMILY SSF56563 117 397 7.06E-74 T 11-10-2018 DB34_06375 c60f447f9093fd9dc287dc3793baa577 404 Gene3D G3DSA:3.30.2320.10 252 390 1.3E-89 T 11-10-2018 DB34_05820 826157f91ac75541faff62e4bde47c95 151 Gene3D G3DSA:3.40.1280.10 1 150 2.7E-47 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DB34_05820 826157f91ac75541faff62e4bde47c95 151 Pfam PF02590 Predicted SPOUT methyltransferase 2 146 5.9E-45 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 DB34_05820 826157f91ac75541faff62e4bde47c95 151 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 147 25.133 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 DB34_05820 826157f91ac75541faff62e4bde47c95 151 PIRSF PIRSF004505 1 147 5.9E-43 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 DB34_05820 826157f91ac75541faff62e4bde47c95 151 SUPERFAMILY SSF75217 2 146 3.86E-42 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases DB34_02290 b53f96f20b0782136ed76bbce38d6b75 200 SUPERFAMILY SSF53254 73 196 8.99E-12 T 11-10-2018 IPR029033 Histidine phosphatase superfamily DB34_02290 b53f96f20b0782136ed76bbce38d6b75 200 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 74 196 1.1E-10 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DB34_02290 b53f96f20b0782136ed76bbce38d6b75 200 Gene3D G3DSA:3.40.50.1240 65 184 2.2E-11 T 11-10-2018 IPR029033 Histidine phosphatase superfamily DB34_01015 7ad7ee577538b455e7a0b0e5cc33739d 294 SUPERFAMILY SSF46785 212 278 2.2E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB34_01015 7ad7ee577538b455e7a0b0e5cc33739d 294 Gene3D G3DSA:1.10.10.10 207 281 1.6E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB34_01015 7ad7ee577538b455e7a0b0e5cc33739d 294 SUPERFAMILY SSF55811 14 116 3.92E-5 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DB34_01015 7ad7ee577538b455e7a0b0e5cc33739d 294 PIRSF PIRSF019423 1 292 6.5E-94 T 11-10-2018 IPR011213 Nicotinic acid mononucleotide biosynthesis protein DB34_08930 69f299ea889505dbcfea425f18e66adb 613 Pfam PF13662 Toprim domain 263 329 1.4E-17 T 11-10-2018 IPR006171 TOPRIM domain DB34_08930 69f299ea889505dbcfea425f18e66adb 613 Hamap MF_00974 DNA primase [dnaG]. 2 604 24.025 T 11-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 DB34_08930 69f299ea889505dbcfea425f18e66adb 613 Pfam PF01807 CHC2 zinc finger 5 96 2.2E-33 T 11-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 DB34_08930 69f299ea889505dbcfea425f18e66adb 613 SMART SM00493 261 332 3.1E-14 T 11-10-2018 IPR006171 TOPRIM domain DB34_08930 69f299ea889505dbcfea425f18e66adb 613 SUPERFAMILY SSF57783 2 95 6.29E-34 T 11-10-2018 DB34_08930 69f299ea889505dbcfea425f18e66adb 613 TIGRFAM TIGR01391 dnaG: DNA primase 3 420 2.9E-122 T 11-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 DB34_08930 69f299ea889505dbcfea425f18e66adb 613 Gene3D G3DSA:3.40.1360.10 236 369 1.3E-37 T 11-10-2018 DB34_08930 69f299ea889505dbcfea425f18e66adb 613 SUPERFAMILY SSF56731 110 421 1.1E-91 T 11-10-2018 DB34_08930 69f299ea889505dbcfea425f18e66adb 613 Gene3D G3DSA:3.90.580.10 1 98 2.6E-36 T 11-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 DB34_08930 69f299ea889505dbcfea425f18e66adb 613 PIRSF PIRSF002811 1 603 1.2E-127 T 11-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 DB34_08930 69f299ea889505dbcfea425f18e66adb 613 Pfam PF08275 DNA primase catalytic core, N-terminal domain 123 246 1.1E-31 T 11-10-2018 IPR013264 DNA primase, catalytic core, N-terminal DB34_08930 69f299ea889505dbcfea425f18e66adb 613 SMART SM00400 34 86 4.3E-28 T 11-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 DB34_08930 69f299ea889505dbcfea425f18e66adb 613 Gene3D G3DSA:3.90.980.10 104 235 2.1E-31 T 11-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily DB34_08320 18faaaa8869387a2c7232be91c2b6043 224 Pfam PF00929 Exonuclease 6 164 2.5E-38 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DB34_08320 18faaaa8869387a2c7232be91c2b6043 224 Gene3D G3DSA:3.30.420.10 1 173 8.4E-56 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DB34_08320 18faaaa8869387a2c7232be91c2b6043 224 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 6 172 4.0E-47 T 11-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DB34_08320 18faaaa8869387a2c7232be91c2b6043 224 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 3 219 8.6E-80 T 11-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DB34_08320 18faaaa8869387a2c7232be91c2b6043 224 SUPERFAMILY SSF53098 4 170 7.59E-53 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily DB34_08320 18faaaa8869387a2c7232be91c2b6043 224 SMART SM00479 3 173 4.9E-49 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DB34_06655 812a9840e909793949e942a7c8256824 416 Pfam PF01266 FAD dependent oxidoreductase 114 371 1.8E-14 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DB34_06655 812a9840e909793949e942a7c8256824 416 SUPERFAMILY SSF51971 111 348 4.3E-20 T 11-10-2018 DB34_06655 812a9840e909793949e942a7c8256824 416 ProSitePatterns PS00677 D-amino acid oxidases signature. 82 100 - T 11-10-2018 IPR006181 D-amino acid oxidase, conserved site GO:0003884|GO:0055114 Reactome: R-HSA-389661|Reactome: R-HSA-9033241 DB34_06655 812a9840e909793949e942a7c8256824 416 Gene3D G3DSA:3.40.50.720 112 196 1.2E-13 T 11-10-2018 DB34_06655 812a9840e909793949e942a7c8256824 416 Gene3D G3DSA:3.40.50.720 47 111 2.1E-10 T 11-10-2018 DB34_04335 74cccb8383cc5a8780664edb344138d3 357 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 18 355 7.1E-82 T 11-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 DB34_04335 74cccb8383cc5a8780664edb344138d3 357 Gene3D G3DSA:1.10.10.10 8 98 1.9E-29 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB34_04335 74cccb8383cc5a8780664edb344138d3 357 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 15 349 26.546 T 11-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 DB34_04335 74cccb8383cc5a8780664edb344138d3 357 PIRSF PIRSF005485 13 357 3.5E-101 T 11-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 DB34_04335 74cccb8383cc5a8780664edb344138d3 357 Pfam PF01628 HrcA protein C terminal domain 118 341 3.0E-46 T 11-10-2018 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 DB34_04335 74cccb8383cc5a8780664edb344138d3 357 Gene3D G3DSA:3.30.390.60 142 245 4.4E-24 T 11-10-2018 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily DB34_04335 74cccb8383cc5a8780664edb344138d3 357 SUPERFAMILY SSF46785 16 98 1.06E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB34_04335 74cccb8383cc5a8780664edb344138d3 357 SUPERFAMILY SSF55781 86 356 4.71E-47 T 11-10-2018 DB34_04335 74cccb8383cc5a8780664edb344138d3 357 Gene3D G3DSA:3.30.450.40 121 355 4.4E-24 T 11-10-2018 IPR029016 GAF-like domain superfamily DB34_00250 4593d3e23a3d13682305edbaf0492364 461 SUPERFAMILY SSF53098 155 398 1.06E-5 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily DB34_00250 4593d3e23a3d13682305edbaf0492364 461 Pfam PF13701 Transposase DDE domain group 1 13 458 2.5E-165 T 11-10-2018 IPR025668 Transposase DDE domain DB34_01615 c7c83c75b43f125cfa72f062b331c205 323 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 1 319 35.149 T 11-10-2018 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase GO:0042823|GO:0050570 KEGG: 00750+1.1.1.262 DB34_01615 c7c83c75b43f125cfa72f062b331c205 323 Gene3D G3DSA:3.40.718.10 1 320 7.7E-125 T 11-10-2018 DB34_01615 c7c83c75b43f125cfa72f062b331c205 323 SUPERFAMILY SSF53659 2 319 8.64E-110 T 11-10-2018 DB34_01615 c7c83c75b43f125cfa72f062b331c205 323 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 31 312 2.7E-107 T 11-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 DB34_01615 c7c83c75b43f125cfa72f062b331c205 323 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 2 316 7.8E-123 T 11-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 DB34_13565 43ce05847f7abbae97f45818d15a3473 63 SUPERFAMILY SSF56349 9 56 9.71E-6 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DB34_13565 43ce05847f7abbae97f45818d15a3473 63 Gene3D G3DSA:1.10.443.10 2 58 5.9E-6 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 DB34_12955 fd8e6787e0a2eea0db94edce4066dd4c 101 Gene3D G3DSA:3.30.160.190 1 79 2.2E-24 T 11-10-2018 IPR038532 NADH dehydrogenase ubiquinone Fe-S protein 4-like superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_12955 fd8e6787e0a2eea0db94edce4066dd4c 101 Pfam PF04800 ETC complex I subunit conserved region 3 95 6.1E-29 T 11-10-2018 IPR006885 NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrial GO:0016651|GO:0022900 DB34_04445 f71fa81b4ee3032a276017a78d4aa9da 472 PIRSF PIRSF000018 1 444 6.8E-170 T 11-10-2018 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0016020|GO:0016614|GO:0020037 DB34_04445 f71fa81b4ee3032a276017a78d4aa9da 472 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 322 404 3.5E-9 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB34_04445 f71fa81b4ee3032a276017a78d4aa9da 472 Pfam PF00034 Cytochrome c 37 133 5.7E-5 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB34_04445 f71fa81b4ee3032a276017a78d4aa9da 472 SUPERFAMILY SSF46626 179 293 4.14E-19 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DB34_04445 f71fa81b4ee3032a276017a78d4aa9da 472 Gene3D G3DSA:1.10.760.10 157 297 2.8E-8 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DB34_04445 f71fa81b4ee3032a276017a78d4aa9da 472 Gene3D G3DSA:1.10.760.10 6 140 3.5E-10 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DB34_04445 f71fa81b4ee3032a276017a78d4aa9da 472 SUPERFAMILY SSF46626 322 417 1.89E-23 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DB34_04445 f71fa81b4ee3032a276017a78d4aa9da 472 SUPERFAMILY SSF46626 24 156 1.83E-21 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DB34_04445 f71fa81b4ee3032a276017a78d4aa9da 472 Gene3D G3DSA:1.10.760.10 304 433 6.0E-28 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DB34_03055 97e99dc851458aee103f1d5e9134a8eb 154 SUPERFAMILY SSF53098 18 152 7.13E-35 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily DB34_03055 97e99dc851458aee103f1d5e9134a8eb 154 Pfam PF03652 Holliday junction resolvase 18 151 6.1E-36 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 DB34_03055 97e99dc851458aee103f1d5e9134a8eb 154 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 20 150 1.4E-25 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 DB34_03055 97e99dc851458aee103f1d5e9134a8eb 154 SMART SM00732 17 117 2.0E-20 T 11-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 DB34_03055 97e99dc851458aee103f1d5e9134a8eb 154 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 17 153 21.689 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 DB34_03055 97e99dc851458aee103f1d5e9134a8eb 154 Gene3D G3DSA:3.30.420.140 16 154 1.1E-39 T 11-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 DB34_02825 2261360b97c599a8723af9d5d63e84c4 403 PIRSF PIRSF028704 12 403 9.0E-80 T 11-10-2018 IPR014550 Uncharacterised conserved protein UCP028704, OpgC DB34_02825 2261360b97c599a8723af9d5d63e84c4 403 Pfam PF10129 OpgC protein 42 391 1.2E-88 T 11-10-2018 IPR014550 Uncharacterised conserved protein UCP028704, OpgC DB34_02400 efdebdaf3e2ef297b81c31dd0d32844e 264 SUPERFAMILY SSF53474 13 261 3.48E-47 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold DB34_02400 efdebdaf3e2ef297b81c31dd0d32844e 264 Gene3D G3DSA:3.40.50.1820 8 262 2.7E-68 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold DB34_02400 efdebdaf3e2ef297b81c31dd0d32844e 264 Pfam PF12697 Alpha/beta hydrolase family 31 255 2.3E-18 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DB34_01285 eaf4d4f8bd5903aaed0be64da1a92935 369 Gene3D G3DSA:3.40.50.1820 61 331 1.2E-50 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold DB34_01285 eaf4d4f8bd5903aaed0be64da1a92935 369 Pfam PF12146 Serine aminopeptidase, S33 83 316 1.1E-42 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 DB34_01285 eaf4d4f8bd5903aaed0be64da1a92935 369 SUPERFAMILY SSF53474 42 328 1.04E-39 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold DB34_01285 eaf4d4f8bd5903aaed0be64da1a92935 369 PRINTS PR00111 Alpha/beta hydrolase fold signature 160 173 2.3E-8 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DB34_01285 eaf4d4f8bd5903aaed0be64da1a92935 369 PRINTS PR00111 Alpha/beta hydrolase fold signature 272 286 2.3E-8 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DB34_01285 eaf4d4f8bd5903aaed0be64da1a92935 369 PRINTS PR00111 Alpha/beta hydrolase fold signature 112 127 2.3E-8 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DB34_10040 794a2c8fffaf1d49d0afd38b6bba9ce6 162 Gene3D G3DSA:3.30.530.20 2 143 9.2E-47 T 11-10-2018 IPR023393 START-like domain superfamily DB34_10040 794a2c8fffaf1d49d0afd38b6bba9ce6 162 SUPERFAMILY SSF55961 1 143 5.91E-37 T 11-10-2018 DB34_10040 794a2c8fffaf1d49d0afd38b6bba9ce6 162 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 133 3.3E-30 T 11-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 DB34_09855 181b97ad103c925a1afcf3df085f880c 247 Gene3D G3DSA:3.40.50.720 1 247 1.3E-86 T 11-10-2018 DB34_09855 181b97ad103c925a1afcf3df085f880c 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DB34_09855 181b97ad103c925a1afcf3df085f880c 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 1.1E-50 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_09855 181b97ad103c925a1afcf3df085f880c 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.1E-50 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_09855 181b97ad103c925a1afcf3df085f880c 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 1.1E-50 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_09855 181b97ad103c925a1afcf3df085f880c 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 1.1E-50 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_09855 181b97ad103c925a1afcf3df085f880c 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 1.1E-50 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_09855 181b97ad103c925a1afcf3df085f880c 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.1E-50 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_09855 181b97ad103c925a1afcf3df085f880c 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 1.0E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_09855 181b97ad103c925a1afcf3df085f880c 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 1.0E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_09855 181b97ad103c925a1afcf3df085f880c 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 1.0E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_09855 181b97ad103c925a1afcf3df085f880c 247 SUPERFAMILY SSF51735 5 246 4.43E-87 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily DB34_09855 181b97ad103c925a1afcf3df085f880c 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 244 7.3E-66 T 11-10-2018 DB34_09855 181b97ad103c925a1afcf3df085f880c 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 185 4.2E-7 T 11-10-2018 DB34_09855 181b97ad103c925a1afcf3df085f880c 247 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 9 245 1.5E-95 T 11-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DB34_06495 b94af6b2e9814e431944ab4b9a309783 85 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 22 71 6.5E-6 T 11-10-2018 IPR010260 DNA-binding transcriptional activator AlpA DB34_02995 849f66237cc8a54e52f731850e6551d9 495 SUPERFAMILY SSF103473 17 460 1.44E-74 T 11-10-2018 IPR036259 MFS transporter superfamily DB34_02995 849f66237cc8a54e52f731850e6551d9 495 Gene3D G3DSA:1.20.1250.20 20 465 2.0E-111 T 11-10-2018 DB34_02995 849f66237cc8a54e52f731850e6551d9 495 ProSitePatterns PS00216 Sugar transport proteins signature 1. 82 99 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 DB34_02995 849f66237cc8a54e52f731850e6551d9 495 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 20 459 1.4E-90 T 11-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 DB34_02995 849f66237cc8a54e52f731850e6551d9 495 PRINTS PR00171 Sugar transporter signature 119 138 4.3E-15 T 11-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 DB34_02995 849f66237cc8a54e52f731850e6551d9 495 PRINTS PR00171 Sugar transporter signature 36 46 4.3E-15 T 11-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 DB34_02995 849f66237cc8a54e52f731850e6551d9 495 PRINTS PR00171 Sugar transporter signature 387 399 4.3E-15 T 11-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 DB34_02995 849f66237cc8a54e52f731850e6551d9 495 PRINTS PR00171 Sugar transporter signature 274 284 4.3E-15 T 11-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 DB34_02995 849f66237cc8a54e52f731850e6551d9 495 PRINTS PR00171 Sugar transporter signature 364 385 4.3E-15 T 11-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 DB34_02995 849f66237cc8a54e52f731850e6551d9 495 Pfam PF00083 Sugar (and other) transporter 29 462 4.0E-90 T 11-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 DB34_06790 a43190c6dde9c6722cc33373ed319166 484 Pfam PF03237 Terminase-like family 72 296 4.5E-10 T 11-10-2018 IPR004921 Terminase large subunit, T4likevirus-type DB34_06790 a43190c6dde9c6722cc33373ed319166 484 TIGRFAM TIGR01630 psiM2_ORF9: phage uncharacterized protein, C-terminal domain 332 467 3.6E-21 T 11-10-2018 IPR006517 Archaeophage PsiM2, terminase large subunit DB34_06790 a43190c6dde9c6722cc33373ed319166 484 Pfam PF17289 Terminase RNaseH-like domain 318 465 2.2E-16 T 11-10-2018 IPR035421 Terminase, large subunit gp17-like DB34_10070 24728a16407aefd816a03ac2712ed1d5 170 Gene3D G3DSA:3.30.70.640 16 170 6.5E-68 T 11-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DB34_10070 24728a16407aefd816a03ac2712ed1d5 170 Pfam PF01967 MoaC family 29 162 6.3E-56 T 11-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DB34_10070 24728a16407aefd816a03ac2712ed1d5 170 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 18 164 5.5E-68 T 11-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DB34_10070 24728a16407aefd816a03ac2712ed1d5 170 SUPERFAMILY SSF55040 25 167 6.93E-60 T 11-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DB34_10070 24728a16407aefd816a03ac2712ed1d5 170 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 16 170 36.996 T 11-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DB34_07875 8d660a0d61e7edcbf72a396ca16d51ee 149 SUPERFAMILY SSF46785 10 132 4.55E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB34_07875 8d660a0d61e7edcbf72a396ca16d51ee 149 Pfam PF02082 Transcriptional regulator 8 85 3.4E-17 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type DB34_07875 8d660a0d61e7edcbf72a396ca16d51ee 149 Gene3D G3DSA:1.10.10.10 5 139 1.5E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB34_07875 8d660a0d61e7edcbf72a396ca16d51ee 149 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 7 130 1.0E-22 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type DB34_07875 8d660a0d61e7edcbf72a396ca16d51ee 149 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 51 69 - T 11-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site DB34_10085 44032b6672d0c5676733fcc9ce79269b 198 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 1.2E-6 T 11-10-2018 DB34_10085 44032b6672d0c5676733fcc9ce79269b 198 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 1.2E-6 T 11-10-2018 DB34_10085 44032b6672d0c5676733fcc9ce79269b 198 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 186 5.6E-77 T 11-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DB34_10085 44032b6672d0c5676733fcc9ce79269b 198 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 1.1E-13 T 11-10-2018 DB34_10085 44032b6672d0c5676733fcc9ce79269b 198 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 1.1E-13 T 11-10-2018 DB34_10085 44032b6672d0c5676733fcc9ce79269b 198 PRINTS PR00096 Glutamine amidotransferase superfamily signature 164 177 1.1E-13 T 11-10-2018 DB34_10085 44032b6672d0c5676733fcc9ce79269b 198 SUPERFAMILY SSF52317 1 193 3.3E-59 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like DB34_10085 44032b6672d0c5676733fcc9ce79269b 198 PRINTS PR00097 Anthranilate synthase component II signature 99 107 5.7E-35 T 11-10-2018 DB34_10085 44032b6672d0c5676733fcc9ce79269b 198 PRINTS PR00097 Anthranilate synthase component II signature 2 16 5.7E-35 T 11-10-2018 DB34_10085 44032b6672d0c5676733fcc9ce79269b 198 PRINTS PR00097 Anthranilate synthase component II signature 47 56 5.7E-35 T 11-10-2018 DB34_10085 44032b6672d0c5676733fcc9ce79269b 198 PRINTS PR00097 Anthranilate synthase component II signature 74 85 5.7E-35 T 11-10-2018 DB34_10085 44032b6672d0c5676733fcc9ce79269b 198 PRINTS PR00097 Anthranilate synthase component II signature 164 177 5.7E-35 T 11-10-2018 DB34_10085 44032b6672d0c5676733fcc9ce79269b 198 PRINTS PR00097 Anthranilate synthase component II signature 119 131 5.7E-35 T 11-10-2018 DB34_10085 44032b6672d0c5676733fcc9ce79269b 198 Gene3D G3DSA:3.40.50.880 1 191 1.6E-65 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like DB34_10085 44032b6672d0c5676733fcc9ce79269b 198 Pfam PF00117 Glutamine amidotransferase class-I 3 185 7.0E-55 T 11-10-2018 IPR017926 Glutamine amidotransferase DB34_04865 9e02ba987fd3760205c683fe3a874054 286 Gene3D G3DSA:1.10.600.10 13 262 1.7E-53 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily DB34_04865 9e02ba987fd3760205c683fe3a874054 286 Pfam PF00494 Squalene/phytoene synthase 19 271 1.7E-46 T 11-10-2018 DB34_04865 9e02ba987fd3760205c683fe3a874054 286 TIGRFAM TIGR03464 HpnC: squalene synthase HpnC 17 282 3.0E-79 T 11-10-2018 IPR017827 Hydroxysqualene synthase HpnC MetaCyc: PWY-7072 DB34_04865 9e02ba987fd3760205c683fe3a874054 286 SUPERFAMILY SSF48576 20 284 1.32E-48 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily DB34_06585 f82de4f6634ac1a6cad22d07817bd4f6 228 Pfam PF06912 Protein of unknown function (DUF1275) 18 213 2.4E-27 T 11-10-2018 IPR010699 Protein of unknown function DUF1275 DB34_12620 3b40a1351e7851f2889318efe52cc995 254 Gene3D G3DSA:1.10.1660.10 35 107 8.6E-20 T 11-10-2018 DB34_12620 3b40a1351e7851f2889318efe52cc995 254 SMART SM00422 39 108 0.0032 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DB34_12620 3b40a1351e7851f2889318efe52cc995 254 SUPERFAMILY SSF46955 39 132 2.01E-15 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily DB34_12620 3b40a1351e7851f2889318efe52cc995 254 Pfam PF13411 MerR HTH family regulatory protein 39 107 1.2E-23 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DB34_07460 25af3c471c15547b775ece67cc0a84e6 305 TIGRFAM TIGR00761 argB: acetylglutamate kinase 36 279 8.3E-76 T 11-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DB34_07460 25af3c471c15547b775ece67cc0a84e6 305 Hamap MF_00082 Acetylglutamate kinase [argB]. 34 297 48.913 T 11-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DB34_07460 25af3c471c15547b775ece67cc0a84e6 305 SUPERFAMILY SSF53633 14 304 3.01E-92 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DB34_07460 25af3c471c15547b775ece67cc0a84e6 305 Pfam PF00696 Amino acid kinase family 36 280 4.0E-47 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 DB34_07460 25af3c471c15547b775ece67cc0a84e6 305 PRINTS PR00474 Glutamate 5-kinase family signature 204 231 1.2E-7 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 DB34_07460 25af3c471c15547b775ece67cc0a84e6 305 PRINTS PR00474 Glutamate 5-kinase family signature 66 80 1.2E-7 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 DB34_07460 25af3c471c15547b775ece67cc0a84e6 305 PRINTS PR00474 Glutamate 5-kinase family signature 254 274 1.2E-7 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 DB34_07460 25af3c471c15547b775ece67cc0a84e6 305 Gene3D G3DSA:3.40.1160.10 10 304 3.8E-95 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DB34_07460 25af3c471c15547b775ece67cc0a84e6 305 PIRSF PIRSF000728 14 304 5.9E-105 T 11-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DB34_06690 14f67a776ca4c7d4b64b14b9d17d0e5e 340 Pfam PF02371 Transposase IS116/IS110/IS902 family 210 285 4.7E-24 T 11-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 DB34_06690 14f67a776ca4c7d4b64b14b9d17d0e5e 340 Pfam PF01548 Transposase 6 145 2.3E-14 T 11-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 DB34_00060 854ac46c60f60ccb9e05665dbe1aa3f3 487 Pfam PF00483 Nucleotidyl transferase 21 303 1.9E-64 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 DB34_00060 854ac46c60f60ccb9e05665dbe1aa3f3 487 SUPERFAMILY SSF53448 19 299 3.9E-68 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB34_00060 854ac46c60f60ccb9e05665dbe1aa3f3 487 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 20 485 6.0E-210 T 11-10-2018 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 DB34_00060 854ac46c60f60ccb9e05665dbe1aa3f3 487 Pfam PF01050 Mannose-6-phosphate isomerase 332 482 3.3E-68 T 11-10-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 DB34_00060 854ac46c60f60ccb9e05665dbe1aa3f3 487 Gene3D G3DSA:3.90.550.10 18 367 1.4E-113 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB34_00060 854ac46c60f60ccb9e05665dbe1aa3f3 487 Gene3D G3DSA:2.60.120.10 373 481 1.3E-17 T 11-10-2018 IPR014710 RmlC-like jelly roll fold DB34_00060 854ac46c60f60ccb9e05665dbe1aa3f3 487 SUPERFAMILY SSF51182 202 486 8.9E-80 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily DB34_09035 60477c131795b42f93478714303338e6 462 Pfam PF13458 Periplasmic binding protein 59 444 9.7E-20 T 11-10-2018 IPR028081 Leucine-binding protein domain DB34_09035 60477c131795b42f93478714303338e6 462 Gene3D G3DSA:3.40.50.2300 281 434 2.6E-6 T 11-10-2018 DB34_09035 60477c131795b42f93478714303338e6 462 Gene3D G3DSA:3.40.50.2300 57 240 4.7E-18 T 11-10-2018 DB34_09035 60477c131795b42f93478714303338e6 462 SUPERFAMILY SSF53822 58 445 1.85E-51 T 11-10-2018 IPR028082 Periplasmic binding protein-like I DB34_08625 e4866e9e383e652eabebeed4bbf365ac 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site DB34_08625 e4866e9e383e652eabebeed4bbf365ac 396 Gene3D G3DSA:3.40.50.300 1 205 2.4E-71 T 11-10-2018 DB34_08625 e4866e9e383e652eabebeed4bbf365ac 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 150 4.7E-15 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DB34_08625 e4866e9e383e652eabebeed4bbf365ac 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 1.1E-58 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB34_08625 e4866e9e383e652eabebeed4bbf365ac 396 Gene3D G3DSA:2.40.30.10 340 395 4.6E-28 T 11-10-2018 DB34_08625 e4866e9e383e652eabebeed4bbf365ac 396 SUPERFAMILY SSF52540 6 221 8.58E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_08625 e4866e9e383e652eabebeed4bbf365ac 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 60.492 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DB34_08625 e4866e9e383e652eabebeed4bbf365ac 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 3.3E-17 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 DB34_08625 e4866e9e383e652eabebeed4bbf365ac 396 SUPERFAMILY SSF50447 205 303 9.82E-31 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DB34_08625 e4866e9e383e652eabebeed4bbf365ac 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 3.2E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB34_08625 e4866e9e383e652eabebeed4bbf365ac 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 3.2E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB34_08625 e4866e9e383e652eabebeed4bbf365ac 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 3.2E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB34_08625 e4866e9e383e652eabebeed4bbf365ac 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 3.2E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB34_08625 e4866e9e383e652eabebeed4bbf365ac 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 3.2E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB34_08625 e4866e9e383e652eabebeed4bbf365ac 396 SUPERFAMILY SSF50465 304 396 9.59E-36 T 11-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal DB34_08625 e4866e9e383e652eabebeed4bbf365ac 396 Gene3D G3DSA:2.40.30.10 209 336 9.3E-53 T 11-10-2018 DB34_08625 e4866e9e383e652eabebeed4bbf365ac 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 396 5.4E-229 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DB34_08625 e4866e9e383e652eabebeed4bbf365ac 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 3.0E-33 T 11-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal DB34_04670 b300878bd11e7950b53002f45ab4bf79 279 Gene3D G3DSA:1.10.3720.10 13 271 1.5E-60 T 11-10-2018 IPR035906 MetI-like superfamily DB34_04670 b300878bd11e7950b53002f45ab4bf79 279 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 12 267 4.8E-82 T 11-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 DB34_04670 b300878bd11e7950b53002f45ab4bf79 279 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 259 2.7E-24 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB34_04670 b300878bd11e7950b53002f45ab4bf79 279 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 9 270 8.0E-101 T 11-10-2018 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 DB34_04670 b300878bd11e7950b53002f45ab4bf79 279 SUPERFAMILY SSF161098 14 260 4.86E-52 T 11-10-2018 IPR035906 MetI-like superfamily DB34_07115 91ec8bd7c24b060bddb4d5f67b43de36 334 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 19 194 3.3E-60 T 11-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain DB34_07115 91ec8bd7c24b060bddb4d5f67b43de36 334 SUPERFAMILY SSF90002 238 332 5.23E-27 T 11-10-2018 DB34_07115 91ec8bd7c24b060bddb4d5f67b43de36 334 Gene3D G3DSA:3.40.50.300 16 213 1.1E-76 T 11-10-2018 DB34_07115 91ec8bd7c24b060bddb4d5f67b43de36 334 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 238 332 4.0E-24 T 11-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal DB34_07115 91ec8bd7c24b060bddb4d5f67b43de36 334 Gene3D G3DSA:3.30.1220.10 215 332 1.1E-34 T 11-10-2018 IPR036627 CobW-like, C-terminal domain superfamily DB34_07115 91ec8bd7c24b060bddb4d5f67b43de36 334 SMART SM00833 238 332 1.5E-20 T 11-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal DB34_07115 91ec8bd7c24b060bddb4d5f67b43de36 334 SUPERFAMILY SSF52540 17 233 4.69E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_01345 2144babd2f721a95ab54e81a52e81d08 122 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 8 121 9.1E-30 T 11-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 DB34_01345 2144babd2f721a95ab54e81a52e81d08 122 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 102 119 - T 11-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 DB34_01345 2144babd2f721a95ab54e81a52e81d08 122 Gene3D G3DSA:2.60.300.12 7 122 2.6E-30 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 DB34_01345 2144babd2f721a95ab54e81a52e81d08 122 Pfam PF01521 Iron-sulphur cluster biosynthesis 8 116 6.9E-16 T 11-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 DB34_01345 2144babd2f721a95ab54e81a52e81d08 122 SUPERFAMILY SSF89360 7 110 1.29E-21 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 DB34_04870 f37ec37350ebed74605400a8c3a30225 398 Gene3D G3DSA:3.90.550.10 34 267 8.4E-24 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB34_04870 f37ec37350ebed74605400a8c3a30225 398 TIGRFAM TIGR03469 HpnB: hopene-associated glycosyltransferase HpnB 3 381 9.6E-149 T 11-10-2018 IPR017832 Glycosyl transferase, family 2, hopene-associated, HpnB DB34_04870 f37ec37350ebed74605400a8c3a30225 398 SUPERFAMILY SSF53448 38 285 9.38E-30 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB34_04870 f37ec37350ebed74605400a8c3a30225 398 Pfam PF00535 Glycosyl transferase family 2 47 226 8.9E-16 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DB34_12765 175638e62075912f0c6533e15a985ed0 469 PIRSF PIRSF017901 1 469 8.4E-168 T 11-10-2018 IPR035434 Glutamate--cysteine ligase, bacteria and plant GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 DB34_12765 175638e62075912f0c6533e15a985ed0 469 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 74 372 4.9E-84 T 11-10-2018 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 DB34_12765 175638e62075912f0c6533e15a985ed0 469 SUPERFAMILY SSF55931 25 452 1.77E-61 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 DB34_12765 175638e62075912f0c6533e15a985ed0 469 TIGRFAM TIGR01436 glu_cys_lig_pln: glutamate--cysteine ligase 14 468 4.8E-163 T 11-10-2018 IPR011556 Glutamate--cysteine ligase, plant-type GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 DB34_12765 175638e62075912f0c6533e15a985ed0 469 Gene3D G3DSA:3.30.590.20 4 469 1.6E-164 T 11-10-2018 DB34_12630 c1bf3e8fa918f78c0f3290f9a8a400c1 326 Gene3D G3DSA:3.40.47.10 7 326 2.3E-126 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 DB34_12630 c1bf3e8fa918f78c0f3290f9a8a400c1 326 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 11 325 4.1E-129 T 11-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 DB34_12630 c1bf3e8fa918f78c0f3290f9a8a400c1 326 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 8 326 69.958 T 11-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 DB34_12630 c1bf3e8fa918f78c0f3290f9a8a400c1 326 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 237 325 1.6E-37 T 11-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 DB34_12630 c1bf3e8fa918f78c0f3290f9a8a400c1 326 SUPERFAMILY SSF53901 12 325 1.44E-70 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 DB34_12630 c1bf3e8fa918f78c0f3290f9a8a400c1 326 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 113 193 2.3E-34 T 11-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 DB34_05185 bbfcf81abb057a5fc87085c844ba53f4 139 ProSitePatterns PS00893 Nudix box signature. 42 63 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 DB34_05185 bbfcf81abb057a5fc87085c844ba53f4 139 Pfam PF00293 NUDIX domain 10 124 7.8E-22 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DB34_05185 bbfcf81abb057a5fc87085c844ba53f4 139 SUPERFAMILY SSF55811 7 129 5.69E-33 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DB34_05185 bbfcf81abb057a5fc87085c844ba53f4 139 PRINTS PR00502 NUDIX hydrolase family signature 51 66 3.2E-6 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 DB34_05185 bbfcf81abb057a5fc87085c844ba53f4 139 PRINTS PR00502 NUDIX hydrolase family signature 37 51 3.2E-6 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 DB34_05185 bbfcf81abb057a5fc87085c844ba53f4 139 Gene3D G3DSA:3.90.79.10 7 138 3.2E-37 T 11-10-2018 DB34_13215 c4036e42364bd69332fb18e40dffcb6e 276 Gene3D G3DSA:3.90.226.10 61 268 7.7E-48 T 11-10-2018 DB34_13215 c4036e42364bd69332fb18e40dffcb6e 276 Pfam PF01343 Peptidase family S49 129 268 4.0E-33 T 11-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 DB34_13215 c4036e42364bd69332fb18e40dffcb6e 276 Gene3D G3DSA:3.40.1750.20 168 234 7.7E-48 T 11-10-2018 DB34_13215 c4036e42364bd69332fb18e40dffcb6e 276 SUPERFAMILY SSF52096 52 265 8.71E-33 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DB34_12345 810f0b6c63a1e761cc8d37168572ffbd 121 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 4 121 19.161 T 11-10-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 DB34_12345 810f0b6c63a1e761cc8d37168572ffbd 121 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 24 120 8.1E-38 T 11-10-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_12345 810f0b6c63a1e761cc8d37168572ffbd 121 Gene3D G3DSA:1.20.58.1610 3 121 1.4E-42 T 11-10-2018 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_07580 22a44f7410eecb5c21f64b3b4e1e9cb0 262 Pfam PF08378 Nuclease-related domain 84 193 9.5E-23 T 11-10-2018 IPR011528 Nuclease-related domain, NERD DB34_08255 9cf374610197dabae6effd5273cfca9d 272 SUPERFAMILY SSF51621 18 263 3.18E-93 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 DB34_08255 9cf374610197dabae6effd5273cfca9d 272 Gene3D G3DSA:3.20.20.60 6 272 2.1E-99 T 11-10-2018 DB34_08255 9cf374610197dabae6effd5273cfca9d 272 Pfam PF02548 Ketopantoate hydroxymethyltransferase 18 261 3.5E-100 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 DB34_08255 9cf374610197dabae6effd5273cfca9d 272 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 20 262 5.9E-85 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 DB34_08255 9cf374610197dabae6effd5273cfca9d 272 PIRSF PIRSF000388 2 269 1.3E-96 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 DB34_08255 9cf374610197dabae6effd5273cfca9d 272 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 10 266 38.183 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 DB34_08305 d664742015e08517f773eb5a62c6c883 259 SUPERFAMILY SSF53187 7 251 3.14E-76 T 11-10-2018 DB34_08305 d664742015e08517f773eb5a62c6c883 259 Gene3D G3DSA:3.40.630.40 12 253 3.5E-83 T 11-10-2018 DB34_08305 d664742015e08517f773eb5a62c6c883 259 Pfam PF05013 N-formylglutamate amidohydrolase 22 227 1.6E-46 T 11-10-2018 IPR007709 N-formylglutamate amidohydrolase DB34_08305 d664742015e08517f773eb5a62c6c883 259 PIRSF PIRSF029730 3 256 2.2E-91 T 11-10-2018 IPR011227 Uncharacterised conserved protein UCP029730 DB34_02355 bf9825a1c5e3ab86c609c6c84e8f83ff 461 SUPERFAMILY SSF53098 158 398 1.21E-5 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily DB34_02355 bf9825a1c5e3ab86c609c6c84e8f83ff 461 Pfam PF13701 Transposase DDE domain group 1 13 458 3.3E-165 T 11-10-2018 IPR025668 Transposase DDE domain DB34_12025 bf9825a1c5e3ab86c609c6c84e8f83ff 461 SUPERFAMILY SSF53098 158 398 1.21E-5 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily DB34_12025 bf9825a1c5e3ab86c609c6c84e8f83ff 461 Pfam PF13701 Transposase DDE domain group 1 13 458 3.3E-165 T 11-10-2018 IPR025668 Transposase DDE domain DB34_02230 bf9825a1c5e3ab86c609c6c84e8f83ff 461 SUPERFAMILY SSF53098 158 398 1.21E-5 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily DB34_02230 bf9825a1c5e3ab86c609c6c84e8f83ff 461 Pfam PF13701 Transposase DDE domain group 1 13 458 3.3E-165 T 11-10-2018 IPR025668 Transposase DDE domain DB34_12935 bf9825a1c5e3ab86c609c6c84e8f83ff 461 SUPERFAMILY SSF53098 158 398 1.21E-5 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily DB34_12935 bf9825a1c5e3ab86c609c6c84e8f83ff 461 Pfam PF13701 Transposase DDE domain group 1 13 458 3.3E-165 T 11-10-2018 IPR025668 Transposase DDE domain DB34_03620 f5039339a70ce6d4bbf69734b7701267 143 Pfam PF02472 Biopolymer transport protein ExbD/TolR 13 136 3.0E-30 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 DB34_03620 f5039339a70ce6d4bbf69734b7701267 143 Gene3D G3DSA:3.30.420.270 64 133 5.7E-25 T 11-10-2018 DB34_03620 f5039339a70ce6d4bbf69734b7701267 143 TIGRFAM TIGR02801 tolR: protein TolR 16 135 2.2E-42 T 11-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 DB34_08825 23bb38fc376eddd3e97802451c3425a5 367 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 36 42 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 DB34_08825 23bb38fc376eddd3e97802451c3425a5 367 Gene3D G3DSA:3.40.50.150 11 260 7.3E-66 T 11-10-2018 DB34_08825 23bb38fc376eddd3e97802451c3425a5 367 SUPERFAMILY SSF53335 9 258 1.84E-69 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB34_08825 23bb38fc376eddd3e97802451c3425a5 367 Pfam PF01555 DNA methylase 33 253 6.3E-54 T 11-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 DB34_08825 23bb38fc376eddd3e97802451c3425a5 367 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 81 101 1.3E-36 T 11-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 DB34_08825 23bb38fc376eddd3e97802451c3425a5 367 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 215 233 1.3E-36 T 11-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 DB34_08825 23bb38fc376eddd3e97802451c3425a5 367 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 32 46 1.3E-36 T 11-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 DB34_08825 23bb38fc376eddd3e97802451c3425a5 367 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 196 213 1.3E-36 T 11-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 DB34_08825 23bb38fc376eddd3e97802451c3425a5 367 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 238 258 1.3E-36 T 11-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 DB34_12015 42df9a2716b7c0b6ffefdf2c836eb17e 314 Gene3D G3DSA:3.40.190.10 179 280 1.1E-18 T 11-10-2018 DB34_12015 42df9a2716b7c0b6ffefdf2c836eb17e 314 SUPERFAMILY SSF46785 11 112 5.17E-13 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB34_12015 42df9a2716b7c0b6ffefdf2c836eb17e 314 Gene3D G3DSA:1.10.10.10 9 95 1.3E-12 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB34_12015 42df9a2716b7c0b6ffefdf2c836eb17e 314 Pfam PF03466 LysR substrate binding domain 101 307 1.3E-17 T 11-10-2018 IPR005119 LysR, substrate-binding DB34_12015 42df9a2716b7c0b6ffefdf2c836eb17e 314 SUPERFAMILY SSF53850 103 312 1.13E-19 T 11-10-2018 DB34_12015 42df9a2716b7c0b6ffefdf2c836eb17e 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 16 69 5.4E-12 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB34_12015 42df9a2716b7c0b6ffefdf2c836eb17e 314 Gene3D G3DSA:3.40.190.10 106 300 1.1E-18 T 11-10-2018 DB34_06970 f299182bbcedc5e98d89599025412596 258 SUPERFAMILY SSF51735 3 235 3.58E-62 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily DB34_06970 f299182bbcedc5e98d89599025412596 258 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 9 191 0.0042 T 11-10-2018 DB34_06970 f299182bbcedc5e98d89599025412596 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 3.4E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_06970 f299182bbcedc5e98d89599025412596 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 3.4E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_06970 f299182bbcedc5e98d89599025412596 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 3.4E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_06970 f299182bbcedc5e98d89599025412596 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DB34_06970 f299182bbcedc5e98d89599025412596 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 1.1E-18 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_06970 f299182bbcedc5e98d89599025412596 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.1E-18 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_06970 f299182bbcedc5e98d89599025412596 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.1E-18 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_06970 f299182bbcedc5e98d89599025412596 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.1E-18 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_06970 f299182bbcedc5e98d89599025412596 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 1.1E-18 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_06970 f299182bbcedc5e98d89599025412596 258 Gene3D G3DSA:3.40.50.720 11 242 3.6E-62 T 11-10-2018 DB34_06970 f299182bbcedc5e98d89599025412596 258 Pfam PF00106 short chain dehydrogenase 9 189 1.3E-51 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_04100 5278df619034bdb68985982ae75a39c8 391 PIRSF PIRSF000525 11 388 6.6E-45 T 11-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 DB34_04100 5278df619034bdb68985982ae75a39c8 391 SUPERFAMILY SSF53383 16 385 1.69E-64 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB34_04100 5278df619034bdb68985982ae75a39c8 391 Gene3D G3DSA:3.90.1150.10 273 388 2.1E-13 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB34_04100 5278df619034bdb68985982ae75a39c8 391 Gene3D G3DSA:3.40.640.10 32 270 8.4E-42 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB34_04100 5278df619034bdb68985982ae75a39c8 391 TIGRFAM TIGR01365 serC_2: phosphoserine aminotransferase 15 387 1.8E-171 T 11-10-2018 IPR006271 Phosphoserine aminotransferase, Methanosarcina-type GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52 DB34_05295 e1c0a8c91b5fe13760f0ba149435cc2a 132 SUPERFAMILY SSF55298 25 108 4.87E-11 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 DB34_05295 e1c0a8c91b5fe13760f0ba149435cc2a 132 Gene3D G3DSA:3.30.1330.40 3 129 7.4E-12 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 DB34_08675 383f5e63eb1ee7889eace6536a3cc1fb 78 TIGRFAM TIGR00012 L29: ribosomal protein uL29 9 61 5.2E-19 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_08675 383f5e63eb1ee7889eace6536a3cc1fb 78 Pfam PF00831 Ribosomal L29 protein 9 61 2.0E-21 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_08675 383f5e63eb1ee7889eace6536a3cc1fb 78 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 5 64 15.828 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_08675 383f5e63eb1ee7889eace6536a3cc1fb 78 Gene3D G3DSA:1.10.287.310 6 66 1.4E-22 T 11-10-2018 DB34_08675 383f5e63eb1ee7889eace6536a3cc1fb 78 SUPERFAMILY SSF46561 5 63 1.7E-18 T 11-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_03805 45632e0704edd3dd4a78f32fe791442f 198 SUPERFAMILY SSF55469 1 181 6.41E-34 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DB34_03805 45632e0704edd3dd4a78f32fe791442f 198 Pfam PF00881 Nitroreductase family 8 163 1.5E-18 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 DB34_03805 45632e0704edd3dd4a78f32fe791442f 198 PIRSF PIRSF000232 1 187 2.3E-59 T 11-10-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like DB34_03805 45632e0704edd3dd4a78f32fe791442f 198 Gene3D G3DSA:3.40.109.10 4 164 1.0E-36 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DB34_00180 5575dcc1be75e768200d0930f380aeca 413 SUPERFAMILY SSF81648 285 403 5.01E-33 T 11-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 DB34_00180 5575dcc1be75e768200d0930f380aeca 413 PIRSF PIRSF038885 13 412 5.4E-150 T 11-10-2018 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 DB34_00180 5575dcc1be75e768200d0930f380aeca 413 Gene3D G3DSA:1.20.810.10 9 411 7.9E-143 T 11-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 DB34_00180 5575dcc1be75e768200d0930f380aeca 413 Pfam PF00033 Cytochrome b/b6/petB 39 224 1.1E-56 T 11-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 DB34_00180 5575dcc1be75e768200d0930f380aeca 413 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 282 383 1.9E-33 T 11-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 DB34_00180 5575dcc1be75e768200d0930f380aeca 413 SUPERFAMILY SSF81342 28 284 5.18E-87 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 DB34_08095 eee02ddd24a0984e7e46c5011978ec70 273 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 34 264 2.3E-70 T 11-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 DB34_08095 eee02ddd24a0984e7e46c5011978ec70 273 Gene3D G3DSA:3.40.50.150 1 273 2.7E-93 T 11-10-2018 DB34_08095 eee02ddd24a0984e7e46c5011978ec70 273 SUPERFAMILY SSF53335 8 264 1.41E-78 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB34_08095 eee02ddd24a0984e7e46c5011978ec70 273 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 1 262 36.929 T 11-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 DB34_05905 c51582b1b171dd2862e35b14710fe233 389 Pfam PF13506 Glycosyl transferase family 21 101 274 3.8E-43 T 11-10-2018 IPR025993 Ceramide glucosyltransferase GO:0016757 KEGG: 00600+2.4.1.80|MetaCyc: PWY-5129|MetaCyc: PWY-7836|MetaCyc: PWY-7838|MetaCyc: PWY-7839|MetaCyc: PWY-7841|Reactome: R-HSA-1660662 DB34_05905 c51582b1b171dd2862e35b14710fe233 389 Gene3D G3DSA:3.90.550.10 30 262 5.6E-20 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB34_05905 c51582b1b171dd2862e35b14710fe233 389 SUPERFAMILY SSF53448 41 277 1.01E-31 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB34_05905 c51582b1b171dd2862e35b14710fe233 389 TIGRFAM TIGR03472 HpnI: hopanoid biosynthesis associated glycosyl transferase protein HpnI 7 374 1.6E-134 T 11-10-2018 IPR017835 Hopanoid biosynthesis associated glycosyltransferase, HpnI DB34_05780 c60640891a87fd900d75c429082f8986 595 SUPERFAMILY SSF50249 4 107 4.5E-27 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB34_05780 c60640891a87fd900d75c429082f8986 595 SUPERFAMILY SSF55681 116 585 9.96E-96 T 11-10-2018 DB34_05780 c60640891a87fd900d75c429082f8986 595 Pfam PF02938 GAD domain 315 405 3.9E-17 T 11-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 DB34_05780 c60640891a87fd900d75c429082f8986 595 SUPERFAMILY SSF55261 296 422 3.11E-35 T 11-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 DB34_05780 c60640891a87fd900d75c429082f8986 595 Pfam PF00152 tRNA synthetases class II (D, K and N) 122 560 5.0E-92 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB34_05780 c60640891a87fd900d75c429082f8986 595 Gene3D G3DSA:3.30.1360.30 279 422 1.3E-160 T 11-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 DB34_05780 c60640891a87fd900d75c429082f8986 595 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 5 585 1.1E-175 T 11-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 DB34_05780 c60640891a87fd900d75c429082f8986 595 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 4 587 29.31 T 11-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 DB34_05780 c60640891a87fd900d75c429082f8986 595 Gene3D G3DSA:2.40.50.140 1 106 3.2E-30 T 11-10-2018 DB34_05780 c60640891a87fd900d75c429082f8986 595 Gene3D G3DSA:3.30.930.10 121 584 1.3E-160 T 11-10-2018 DB34_05780 c60640891a87fd900d75c429082f8986 595 Pfam PF01336 OB-fold nucleic acid binding domain 23 100 1.8E-14 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 DB34_05780 c60640891a87fd900d75c429082f8986 595 PRINTS PR01042 Aspartyl-tRNA synthetase signature 211 224 3.0E-20 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB34_05780 c60640891a87fd900d75c429082f8986 595 PRINTS PR01042 Aspartyl-tRNA synthetase signature 194 206 3.0E-20 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB34_05780 c60640891a87fd900d75c429082f8986 595 PRINTS PR01042 Aspartyl-tRNA synthetase signature 477 493 3.0E-20 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB34_05780 c60640891a87fd900d75c429082f8986 595 PRINTS PR01042 Aspartyl-tRNA synthetase signature 521 535 3.0E-20 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB34_10285 b01496d62c444914d19ddfab81b9f35e 560 Pfam PF07568 Histidine kinase 360 433 1.0E-22 T 11-10-2018 IPR011495 Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain DB34_10285 b01496d62c444914d19ddfab81b9f35e 560 Gene3D G3DSA:3.30.565.10 417 557 8.2E-22 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB34_10285 b01496d62c444914d19ddfab81b9f35e 560 SUPERFAMILY SSF55874 432 552 8.12E-14 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB34_10285 b01496d62c444914d19ddfab81b9f35e 560 Gene3D G3DSA:3.30.450.20 328 411 8.4E-9 T 11-10-2018 DB34_10285 b01496d62c444914d19ddfab81b9f35e 560 Pfam PF13581 Histidine kinase-like ATPase domain 446 539 6.7E-7 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB34_04505 cde73e82a37a03b6e36f59368d275a08 138 Gene3D G3DSA:1.10.10.10 2 137 1.4E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB34_04505 cde73e82a37a03b6e36f59368d275a08 138 SMART SM00347 23 124 4.8E-7 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DB34_04505 cde73e82a37a03b6e36f59368d275a08 138 SUPERFAMILY SSF46785 28 116 4.6E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB34_04505 cde73e82a37a03b6e36f59368d275a08 138 Pfam PF01047 MarR family 31 89 1.2E-8 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DB34_02730 914e34a53bcf0d9bc41efeae21bd271a 133 SUPERFAMILY SSF54593 3 127 8.59E-28 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DB34_02730 914e34a53bcf0d9bc41efeae21bd271a 133 Gene3D G3DSA:3.10.180.10 1 128 7.2E-30 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DB34_02730 914e34a53bcf0d9bc41efeae21bd271a 133 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 123 9.7E-11 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DB34_04900 90fc15641700b30eb717204ebae9f491 180 Pfam PF00578 AhpC/TSA family 4 139 3.0E-31 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DB34_04900 90fc15641700b30eb717204ebae9f491 180 SUPERFAMILY SSF52833 1 179 1.66E-54 T 11-10-2018 IPR036249 Thioredoxin-like superfamily DB34_04900 90fc15641700b30eb717204ebae9f491 180 PIRSF PIRSF000239 1 180 5.1E-49 T 11-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DB34_04900 90fc15641700b30eb717204ebae9f491 180 Gene3D G3DSA:3.40.30.10 1 180 8.6E-57 T 11-10-2018 DB34_00110 3ec5ce30822a739080819eafd2c9dcf9 694 Pfam PF04632 Fusaric acid resistance protein family 31 616 8.6E-118 T 11-10-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0022857|GO:0055085 DB34_08430 db24e2892ac72267e12785cb1727a650 243 SUPERFAMILY SSF48452 150 223 7.17E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB34_08430 db24e2892ac72267e12785cb1727a650 243 Gene3D G3DSA:1.25.40.10 135 240 1.3E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB34_08430 db24e2892ac72267e12785cb1727a650 243 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 1 111 4.7E-21 T 11-10-2018 IPR017560 Cytochrome c-type biogenesis protein CcmI DB34_04970 f992aa5724720cabf721bd95443b1016 386 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 7 363 5.6E-138 T 11-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 DB34_04970 f992aa5724720cabf721bd95443b1016 386 Gene3D G3DSA:3.20.20.105 1 371 7.7E-154 T 11-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 DB34_04970 f992aa5724720cabf721bd95443b1016 386 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 7 364 3.9E-143 T 11-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 DB34_04970 f992aa5724720cabf721bd95443b1016 386 SUPERFAMILY SSF51713 2 361 4.97E-147 T 11-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 DB34_04970 f992aa5724720cabf721bd95443b1016 386 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 4 366 51.047 T 11-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 DB34_04970 f992aa5724720cabf721bd95443b1016 386 Pfam PF01702 Queuine tRNA-ribosyltransferase 130 361 8.8E-79 T 11-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 DB34_01670 78a876a82a933b922ca40dd39bff726c 224 SUPERFAMILY SSF161098 8 201 1.44E-43 T 11-10-2018 IPR035906 MetI-like superfamily DB34_01670 78a876a82a933b922ca40dd39bff726c 224 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 215 2.0E-19 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB34_01670 78a876a82a933b922ca40dd39bff726c 224 Gene3D G3DSA:1.10.3720.10 2 216 8.1E-47 T 11-10-2018 IPR035906 MetI-like superfamily DB34_12185 baa60fd5b4270edde99e816ee1dc3b3a 404 Gene3D G3DSA:3.90.1150.10 41 389 8.4E-128 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB34_12185 baa60fd5b4270edde99e816ee1dc3b3a 404 SUPERFAMILY SSF53383 21 396 1.32E-102 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB34_12185 baa60fd5b4270edde99e816ee1dc3b3a 404 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 243 252 - T 11-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 DB34_12185 baa60fd5b4270edde99e816ee1dc3b3a 404 Pfam PF00155 Aminotransferase class I and II 48 386 7.2E-55 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DB34_12185 baa60fd5b4270edde99e816ee1dc3b3a 404 Gene3D G3DSA:3.40.640.10 61 296 8.4E-128 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB34_05850 a7d0ddafcd47cfa6fb03057ae70f6c6b 564 SUPERFAMILY SSF52518 375 562 9.47E-38 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold DB34_05850 a7d0ddafcd47cfa6fb03057ae70f6c6b 564 SUPERFAMILY SSF52467 202 346 8.72E-23 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily DB34_05850 a7d0ddafcd47cfa6fb03057ae70f6c6b 564 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 213 337 2.4E-13 T 11-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 DB34_05850 a7d0ddafcd47cfa6fb03057ae70f6c6b 564 SUPERFAMILY SSF52518 11 186 2.36E-43 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold DB34_05850 a7d0ddafcd47cfa6fb03057ae70f6c6b 564 Gene3D G3DSA:3.40.50.970 361 564 1.8E-44 T 11-10-2018 DB34_05850 a7d0ddafcd47cfa6fb03057ae70f6c6b 564 Gene3D G3DSA:3.40.50.970 14 185 2.4E-56 T 11-10-2018 DB34_05850 a7d0ddafcd47cfa6fb03057ae70f6c6b 564 Gene3D G3DSA:3.40.50.1220 194 350 2.0E-26 T 11-10-2018 DB34_05850 a7d0ddafcd47cfa6fb03057ae70f6c6b 564 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 431 559 3.1E-29 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 DB34_05850 a7d0ddafcd47cfa6fb03057ae70f6c6b 564 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 15 179 3.9E-46 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 DB34_13460 c229ed0f10b25c3ba3dc93f54047ee7a 243 Gene3D G3DSA:3.90.550.10 1 242 2.3E-48 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB34_13460 c229ed0f10b25c3ba3dc93f54047ee7a 243 PIRSF PIRSF028162 1 241 4.4E-83 T 11-10-2018 IPR016873 Capsular polysaccharide biosynthesis protein, BcbE, predicted DB34_13460 c229ed0f10b25c3ba3dc93f54047ee7a 243 SUPERFAMILY SSF53448 2 234 2.82E-16 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB34_04200 1d3897b8d5300f18f89157f29648b510 636 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 56 238 5.9E-30 T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DB34_04200 1d3897b8d5300f18f89157f29648b510 636 SUPERFAMILY SSF52518 36 287 3.07E-36 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold DB34_04200 1d3897b8d5300f18f89157f29648b510 636 SMART SM00861 320 481 1.8E-23 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DB34_04200 1d3897b8d5300f18f89157f29648b510 636 Gene3D G3DSA:3.40.50.920 495 627 3.2E-36 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DB34_04200 1d3897b8d5300f18f89157f29648b510 636 SUPERFAMILY SSF52518 315 476 4.16E-34 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold DB34_04200 1d3897b8d5300f18f89157f29648b510 636 Gene3D G3DSA:3.40.50.970 32 294 2.0E-36 T 11-10-2018 DB34_04200 1d3897b8d5300f18f89157f29648b510 636 SUPERFAMILY SSF52922 492 618 5.71E-36 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DB34_04200 1d3897b8d5300f18f89157f29648b510 636 Pfam PF02779 Transketolase, pyrimidine binding domain 362 475 2.5E-21 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DB34_04200 1d3897b8d5300f18f89157f29648b510 636 Gene3D G3DSA:3.40.50.970 295 485 8.1E-43 T 11-10-2018 DB34_02055 b24c684eeed7e9f23b5fba787eb25298 285 Gene3D G3DSA:3.40.50.300 61 285 2.4E-38 T 11-10-2018 DB34_02055 b24c684eeed7e9f23b5fba787eb25298 285 SMART SM00382 86 275 1.4E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_02055 b24c684eeed7e9f23b5fba787eb25298 285 Pfam PF00005 ABC transporter 77 208 1.0E-16 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB34_02055 b24c684eeed7e9f23b5fba787eb25298 285 SUPERFAMILY SSF52540 74 272 1.52E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_05490 ed93caa8676bc98204f6abd28cfbade8 326 Gene3D G3DSA:3.90.180.10 18 324 1.4E-119 T 11-10-2018 DB34_05490 ed93caa8676bc98204f6abd28cfbade8 326 Pfam PF00107 Zinc-binding dehydrogenase 159 285 1.3E-12 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DB34_05490 ed93caa8676bc98204f6abd28cfbade8 326 SUPERFAMILY SSF51735 117 290 3.54E-36 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily DB34_05490 ed93caa8676bc98204f6abd28cfbade8 326 SUPERFAMILY SSF50129 2 144 2.13E-38 T 11-10-2018 IPR011032 GroES-like superfamily DB34_05490 ed93caa8676bc98204f6abd28cfbade8 326 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 3 325 1.8E-133 T 11-10-2018 IPR014188 Acrylyl-CoA reductase AcuI DB34_05490 ed93caa8676bc98204f6abd28cfbade8 326 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 87 4.6E-5 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DB34_05490 ed93caa8676bc98204f6abd28cfbade8 326 Gene3D G3DSA:3.40.50.720 126 293 1.4E-119 T 11-10-2018 DB34_05490 ed93caa8676bc98204f6abd28cfbade8 326 SMART SM00829 13 323 1.3E-5 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 DB34_03560 5ae2e1c46cf6e5d7a4958d8de55a412b 1190 Gene3D G3DSA:3.90.320.10 1007 1172 3.4E-7 T 11-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal DB34_03560 5ae2e1c46cf6e5d7a4958d8de55a412b 1190 Gene3D G3DSA:3.40.50.300 582 682 4.0E-9 T 11-10-2018 DB34_03560 5ae2e1c46cf6e5d7a4958d8de55a412b 1190 Gene3D G3DSA:3.40.50.300 250 488 5.4E-26 T 11-10-2018 DB34_03560 5ae2e1c46cf6e5d7a4958d8de55a412b 1190 TIGRFAM TIGR02784 addA_alphas: double-strand break repair helicase AddA 19 1168 0.0 T 11-10-2018 IPR014151 DNA helicase, AddA type DB34_03560 5ae2e1c46cf6e5d7a4958d8de55a412b 1190 Gene3D G3DSA:3.40.50.300 743 906 4.5E-18 T 11-10-2018 DB34_03560 5ae2e1c46cf6e5d7a4958d8de55a412b 1190 SUPERFAMILY SSF52540 18 896 1.17E-97 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_03560 5ae2e1c46cf6e5d7a4958d8de55a412b 1190 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1017 1150 9.2E-8 T 11-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type DB34_03560 5ae2e1c46cf6e5d7a4958d8de55a412b 1190 Pfam PF13361 UvrD-like helicase C-terminal domain 605 890 2.3E-10 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 DB34_03560 5ae2e1c46cf6e5d7a4958d8de55a412b 1190 Pfam PF00580 UvrD/REP helicase N-terminal domain 17 483 7.3E-47 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 DB34_07680 1e41e821fb9deae5e64d194b6b6c0b5f 72 Pfam PF07866 Protein of unknown function (DUF1653) 6 60 7.9E-19 T 11-10-2018 IPR023387 DUF1653-like domain DB34_07680 1e41e821fb9deae5e64d194b6b6c0b5f 72 Gene3D G3DSA:2.30.30.320 2 72 3.0E-19 T 11-10-2018 IPR037135 DUF1653-like domain superfamily DB34_13605 d3847ca72d1704712d6e2865ea8aee34 203 Pfam PF13586 Transposase DDE domain 118 202 9.0E-16 T 11-10-2018 IPR025668 Transposase DDE domain DB34_10575 c036fd674e5301967a5ba31c31efe4e4 122 SUPERFAMILY SSF46785 12 112 6.02E-36 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB34_10575 c036fd674e5301967a5ba31c31efe4e4 122 Gene3D G3DSA:1.10.10.10 3 121 3.0E-43 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB34_10575 c036fd674e5301967a5ba31c31efe4e4 122 Pfam PF01638 HxlR-like helix-turn-helix 24 111 1.0E-36 T 11-10-2018 IPR002577 Helix-turn-helix, HxlR type DB34_00500 273d88282f020be8181d0cd332708aca 209 Gene3D G3DSA:3.40.50.850 15 201 4.8E-57 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 DB34_00500 273d88282f020be8181d0cd332708aca 209 Pfam PF00857 Isochorismatase family 19 183 5.4E-26 T 11-10-2018 IPR000868 Isochorismatase-like GO:0003824 DB34_00500 273d88282f020be8181d0cd332708aca 209 SUPERFAMILY SSF52499 10 188 7.72E-40 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 DB34_09625 4f7e5a241e7157d303a1e53f01456723 425 SMART SM00530 32 93 2.4E-5 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DB34_09625 4f7e5a241e7157d303a1e53f01456723 425 SUPERFAMILY SSF47413 29 91 1.13E-6 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DB34_09625 4f7e5a241e7157d303a1e53f01456723 425 Pfam PF13413 Helix-turn-helix domain 32 92 4.6E-21 T 11-10-2018 DB34_09625 4f7e5a241e7157d303a1e53f01456723 425 Gene3D G3DSA:1.10.260.40 25 110 7.3E-24 T 11-10-2018 DB34_09625 4f7e5a241e7157d303a1e53f01456723 425 Pfam PF13464 Domain of unknown function (DUF4115) 262 333 5.6E-17 T 11-10-2018 IPR025194 Domain of unknown function DUF4115 DB34_09295 077c1b5643de293995fa8de17149bba5 251 Gene3D G3DSA:3.40.50.150 31 242 1.3E-43 T 11-10-2018 DB34_09295 077c1b5643de293995fa8de17149bba5 251 SUPERFAMILY SSF53335 34 198 2.09E-25 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB34_09295 077c1b5643de293995fa8de17149bba5 251 Pfam PF05175 Methyltransferase small domain 34 169 2.0E-9 T 11-10-2018 IPR007848 Methyltransferase small domain GO:0008168 DB34_04475 323207299a00befb7077c5a3eea404a5 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 348 369 2.2E-91 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB34_04475 323207299a00befb7077c5a3eea404a5 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 166 178 2.2E-91 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB34_04475 323207299a00befb7077c5a3eea404a5 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 227 246 2.2E-91 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB34_04475 323207299a00befb7077c5a3eea404a5 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 97 120 2.2E-91 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB34_04475 323207299a00befb7077c5a3eea404a5 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 47 72 2.2E-91 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB34_04475 323207299a00befb7077c5a3eea404a5 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 461 482 2.2E-91 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB34_04475 323207299a00befb7077c5a3eea404a5 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 324 339 2.2E-91 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB34_04475 323207299a00befb7077c5a3eea404a5 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 411 430 2.2E-91 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB34_04475 323207299a00befb7077c5a3eea404a5 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 198 216 2.2E-91 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB34_04475 323207299a00befb7077c5a3eea404a5 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 278 299 2.2E-91 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB34_04475 323207299a00befb7077c5a3eea404a5 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 383 401 2.2E-91 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB34_04475 323207299a00befb7077c5a3eea404a5 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 124 148 2.2E-91 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB34_04475 323207299a00befb7077c5a3eea404a5 663 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 56 504 2.1E-136 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB34_04475 323207299a00befb7077c5a3eea404a5 663 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 2 650 0.0 T 11-10-2018 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 DB34_04475 323207299a00befb7077c5a3eea404a5 663 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 280 334 - T 11-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB34_04475 323207299a00befb7077c5a3eea404a5 663 Gene3D G3DSA:1.20.210.10 31 569 4.9E-189 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB34_04475 323207299a00befb7077c5a3eea404a5 663 SUPERFAMILY SSF81442 43 561 9.42E-175 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB34_06745 6392165a9568f8fda3dfd01285164025 587 SUPERFAMILY SSF51294 240 377 1.29E-12 T 11-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 DB34_06745 6392165a9568f8fda3dfd01285164025 587 Pfam PF13403 Hint domain 239 379 6.3E-42 T 11-10-2018 IPR028992 Hedgehog/Intein (Hint) domain DB34_01945 1420d11aa652ea56c68925a68ba33076 190 Pfam PF01475 Ferric uptake regulator family 36 165 1.6E-11 T 11-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 DB34_01945 1420d11aa652ea56c68925a68ba33076 190 Gene3D G3DSA:3.30.1490.190 110 177 2.0E-13 T 11-10-2018 DB34_01945 1420d11aa652ea56c68925a68ba33076 190 SUPERFAMILY SSF46785 28 170 2.35E-26 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB34_01945 1420d11aa652ea56c68925a68ba33076 190 Gene3D G3DSA:1.10.10.10 19 105 1.0E-31 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB34_07575 84492eb6597f9cb94ff0ffcc0441c45d 500 Gene3D G3DSA:3.40.50.300 182 498 7.0E-97 T 11-10-2018 DB34_07575 84492eb6597f9cb94ff0ffcc0441c45d 500 SUPERFAMILY SSF48024 20 131 2.75E-30 T 11-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 DB34_07575 84492eb6597f9cb94ff0ffcc0441c45d 500 Pfam PF03796 DnaB-like helicase C terminal domain 200 492 5.0E-100 T 11-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 DB34_07575 84492eb6597f9cb94ff0ffcc0441c45d 500 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 22 494 2.0E-149 T 11-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 DB34_07575 84492eb6597f9cb94ff0ffcc0441c45d 500 Gene3D G3DSA:1.10.860.10 16 181 1.6E-38 T 11-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal DB34_07575 84492eb6597f9cb94ff0ffcc0441c45d 500 SUPERFAMILY SSF52540 198 485 8.76E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_07575 84492eb6597f9cb94ff0ffcc0441c45d 500 Pfam PF00772 DnaB-like helicase N terminal domain 21 123 7.4E-25 T 11-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 DB34_03050 1a2f3fc65f722ffeac1e419bcbf90946 218 SUPERFAMILY SSF118375 158 205 5.75E-5 T 11-10-2018 DB34_03050 1a2f3fc65f722ffeac1e419bcbf90946 218 Gene3D G3DSA:1.10.287.700 156 216 6.7E-14 T 11-10-2018 DB34_03050 1a2f3fc65f722ffeac1e419bcbf90946 218 Gene3D G3DSA:1.10.287.700 112 155 2.6E-11 T 11-10-2018 DB34_03050 1a2f3fc65f722ffeac1e419bcbf90946 218 Gene3D G3DSA:1.10.287.700 65 111 5.6E-11 T 11-10-2018 DB34_03050 1a2f3fc65f722ffeac1e419bcbf90946 218 Pfam PF01387 Synuclein 123 206 1.1E-6 T 11-10-2018 IPR001058 Synuclein DB34_11910 54bb5e84c54dc81ab0270de4ccd36b33 379 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 363 3.5E-91 T 11-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 DB34_11910 54bb5e84c54dc81ab0270de4ccd36b33 379 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 4 378 7.2E-112 T 11-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 DB34_11910 54bb5e84c54dc81ab0270de4ccd36b33 379 PIRSF PIRSF000267 2 379 7.7E-100 T 11-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 DB34_10935 2a46d53f232eb7e92be74b6f541fb4a3 252 Gene3D G3DSA:3.40.1010.10 1 114 2.5E-25 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 DB34_10935 2a46d53f232eb7e92be74b6f541fb4a3 252 Gene3D G3DSA:3.30.950.10 116 250 6.8E-45 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 DB34_10935 2a46d53f232eb7e92be74b6f541fb4a3 252 TIGRFAM TIGR01466 cobJ_cbiH: precorrin-3B C17-methyltransferase 5 247 2.6E-80 T 11-10-2018 IPR006363 Precorrin-3B C17-methyltransferase domain GO:0008168|GO:0009236 DB34_10935 2a46d53f232eb7e92be74b6f541fb4a3 252 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 5 213 1.8E-31 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 DB34_10935 2a46d53f232eb7e92be74b6f541fb4a3 252 SUPERFAMILY SSF53790 1 241 8.64E-48 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 DB34_12285 26a063ec7994e28b01e8edc79657bac6 480 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 6 470 17.851 T 11-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 DB34_12285 26a063ec7994e28b01e8edc79657bac6 480 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 9 437 4.1E-139 T 11-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 DB34_12285 26a063ec7994e28b01e8edc79657bac6 480 Pfam PF00361 Proton-conducting membrane transporter 124 416 2.0E-78 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_07285 50f7bb31d758d4baf86cd657518602c9 804 SUPERFAMILY SSF50998 167 798 2.88E-143 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily DB34_07285 50f7bb31d758d4baf86cd657518602c9 804 Pfam PF01011 PQQ enzyme repeat 727 764 3.5E-5 T 11-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat DB34_07285 50f7bb31d758d4baf86cd657518602c9 804 Pfam PF01011 PQQ enzyme repeat 672 707 4.6E-5 T 11-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat DB34_07285 50f7bb31d758d4baf86cd657518602c9 804 Pfam PF01011 PQQ enzyme repeat 231 259 6.3E-5 T 11-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat DB34_07285 50f7bb31d758d4baf86cd657518602c9 804 Pfam PF01011 PQQ enzyme repeat 452 477 2.0E-6 T 11-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat DB34_07285 50f7bb31d758d4baf86cd657518602c9 804 TIGRFAM TIGR03074 PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 15 798 0.0 T 11-10-2018 IPR017511 PQQ-dependent membrane bound dehydrogenase GO:0016021|GO:0016614|GO:0048038|GO:0055114 DB34_07285 50f7bb31d758d4baf86cd657518602c9 804 Gene3D G3DSA:2.140.10.10 166 561 1.2E-109 T 11-10-2018 DB34_07285 50f7bb31d758d4baf86cd657518602c9 804 ProSitePatterns PS00363 Bacterial quinoprotein dehydrogenases signature 1. 173 201 - T 11-10-2018 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 DB34_07285 50f7bb31d758d4baf86cd657518602c9 804 Gene3D G3DSA:2.140.10.10 562 802 3.0E-32 T 11-10-2018 DB34_07285 50f7bb31d758d4baf86cd657518602c9 804 SMART SM00564 226 257 3.3E-4 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat DB34_07285 50f7bb31d758d4baf86cd657518602c9 804 SMART SM00564 406 467 860.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat DB34_07285 50f7bb31d758d4baf86cd657518602c9 804 SMART SM00564 291 323 750.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat DB34_07285 50f7bb31d758d4baf86cd657518602c9 804 SMART SM00564 348 389 77.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat DB34_07285 50f7bb31d758d4baf86cd657518602c9 804 SMART SM00564 721 754 0.36 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat DB34_11525 26cb16f7cc79e3b80fd4e720ed3bea1b 499 Gene3D G3DSA:3.40.50.300 2 234 7.6E-12 T 11-10-2018 DB34_11525 26cb16f7cc79e3b80fd4e720ed3bea1b 499 Gene3D G3DSA:3.30.420.240 290 406 4.6E-8 T 11-10-2018 DB34_11525 26cb16f7cc79e3b80fd4e720ed3bea1b 499 Gene3D G3DSA:3.30.420.240 419 479 1.4E-7 T 11-10-2018 DB34_11775 2b3666e403986722df1f97c8e2261fe1 256 PRINTS PR00483 Bacterial acid phosphatase class A signature 177 201 1.3E-29 T 11-10-2018 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00730+3.1.3.2|KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 DB34_11775 2b3666e403986722df1f97c8e2261fe1 256 PRINTS PR00483 Bacterial acid phosphatase class A signature 56 75 1.3E-29 T 11-10-2018 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00730+3.1.3.2|KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 DB34_11775 2b3666e403986722df1f97c8e2261fe1 256 PRINTS PR00483 Bacterial acid phosphatase class A signature 211 229 1.3E-29 T 11-10-2018 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00730+3.1.3.2|KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 DB34_11775 2b3666e403986722df1f97c8e2261fe1 256 PRINTS PR00483 Bacterial acid phosphatase class A signature 145 171 1.3E-29 T 11-10-2018 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00730+3.1.3.2|KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 DB34_11775 2b3666e403986722df1f97c8e2261fe1 256 Pfam PF01569 PAP2 superfamily 118 213 1.4E-13 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase DB34_11775 2b3666e403986722df1f97c8e2261fe1 256 PIRSF PIRSF000897 10 252 4.8E-81 T 11-10-2018 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00730+3.1.3.2|KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 DB34_11775 2b3666e403986722df1f97c8e2261fe1 256 SMART SM00014 104 214 1.1E-15 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase DB34_11775 2b3666e403986722df1f97c8e2261fe1 256 SUPERFAMILY SSF48317 29 229 1.44E-34 T 11-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily DB34_11775 2b3666e403986722df1f97c8e2261fe1 256 Gene3D G3DSA:1.20.144.10 22 244 7.3E-71 T 11-10-2018 DB34_04905 b5df5f4d2caafd3654ba1c779d5b646e 175 Pfam PF02627 Carboxymuconolactone decarboxylase family 95 172 2.5E-10 T 11-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 DB34_04905 b5df5f4d2caafd3654ba1c779d5b646e 175 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 111 159 8.6E-13 T 11-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 DB34_04905 b5df5f4d2caafd3654ba1c779d5b646e 175 SUPERFAMILY SSF69118 3 173 7.44E-42 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 DB34_04905 b5df5f4d2caafd3654ba1c779d5b646e 175 TIGRFAM TIGR00777 ahpD: alkylhydroperoxidase, AhpD family 2 173 6.3E-59 T 11-10-2018 IPR004674 Alkylhydroperoxidase AhpD GO:0006979|GO:0032843|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 DB34_04905 b5df5f4d2caafd3654ba1c779d5b646e 175 Hamap MF_01676 Alkyl hydroperoxide reductase AhpD [ahpD]. 1 175 74.414 T 11-10-2018 IPR004674 Alkylhydroperoxidase AhpD GO:0006979|GO:0032843|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 DB34_04905 b5df5f4d2caafd3654ba1c779d5b646e 175 Gene3D G3DSA:1.20.1290.10 1 175 1.6E-58 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 DB34_00545 5307858bc0e127eaa1a201f05641c67e 337 Gene3D G3DSA:3.40.50.300 25 296 2.5E-81 T 11-10-2018 DB34_00545 5307858bc0e127eaa1a201f05641c67e 337 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 21 328 24.958 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 DB34_00545 5307858bc0e127eaa1a201f05641c67e 337 SUPERFAMILY SSF52540 17 231 1.31E-5 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_00545 5307858bc0e127eaa1a201f05641c67e 337 Gene3D G3DSA:1.10.20.140 128 199 2.5E-81 T 11-10-2018 DB34_00545 5307858bc0e127eaa1a201f05641c67e 337 SUPERFAMILY SSF52540 23 176 8.16E-17 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_00545 5307858bc0e127eaa1a201f05641c67e 337 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 22 297 6.4E-68 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 DB34_00545 5307858bc0e127eaa1a201f05641c67e 337 Pfam PF01715 IPP transferase 54 297 1.1E-62 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 DB34_12850 b3ff2c4f82f7226bff328b572ae2e5e7 263 Pfam PF00494 Squalene/phytoene synthase 19 184 2.9E-12 T 11-10-2018 DB34_12850 b3ff2c4f82f7226bff328b572ae2e5e7 263 Gene3D G3DSA:1.10.600.10 11 256 9.1E-6 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily DB34_12850 b3ff2c4f82f7226bff328b572ae2e5e7 263 SUPERFAMILY SSF48576 17 184 5.18E-14 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily DB34_07175 b304f35a17a414470d0d16f2024518ee 76 Pfam PF11324 Protein of unknown function (DUF3126) 9 71 5.3E-25 T 11-10-2018 IPR021473 Protein of unknown function DUF3126 DB34_10975 202219ae4adc966c07583e5a3db58cb9 275 Pfam PF13557 Putative MetA-pathway of phenol degradation 48 270 1.1E-22 T 11-10-2018 IPR025737 MetA-pathway of phenol degradation, putative DB34_07975 9fc4e92c77a43493ffdd8909cab7e0cd 429 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 75 89 - T 11-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 DB34_07975 9fc4e92c77a43493ffdd8909cab7e0cd 429 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 211 228 - T 11-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 DB34_07975 9fc4e92c77a43493ffdd8909cab7e0cd 429 SMART SM00997 189 348 1.7E-109 T 11-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 DB34_07975 9fc4e92c77a43493ffdd8909cab7e0cd 429 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 189 348 1.2E-80 T 11-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 DB34_07975 9fc4e92c77a43493ffdd8909cab7e0cd 429 SUPERFAMILY SSF52283 2 429 6.23E-121 T 11-10-2018 DB34_07975 9fc4e92c77a43493ffdd8909cab7e0cd 429 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 3 139 2.2E-74 T 11-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 DB34_07975 9fc4e92c77a43493ffdd8909cab7e0cd 429 Gene3D G3DSA:3.40.50.1480 1 194 1.1E-98 T 11-10-2018 DB34_07975 9fc4e92c77a43493ffdd8909cab7e0cd 429 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 4 421 8.9E-191 T 11-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 DB34_07975 9fc4e92c77a43493ffdd8909cab7e0cd 429 PIRSF PIRSF001109 1 429 6.9E-198 T 11-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 DB34_07975 9fc4e92c77a43493ffdd8909cab7e0cd 429 Gene3D G3DSA:3.40.50.1480 347 429 6.7E-39 T 11-10-2018 DB34_07975 9fc4e92c77a43493ffdd8909cab7e0cd 429 SUPERFAMILY SSF51735 189 348 2.89E-76 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily DB34_07975 9fc4e92c77a43493ffdd8909cab7e0cd 429 SMART SM00996 3 428 0.0 T 11-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 DB34_07975 9fc4e92c77a43493ffdd8909cab7e0cd 429 Gene3D G3DSA:3.40.50.720 195 346 4.2E-74 T 11-10-2018 DB34_07975 9fc4e92c77a43493ffdd8909cab7e0cd 429 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 1 421 48.293 T 11-10-2018 IPR034373 Adenosylhomocysteinase GO:0004013|GO:0019510|GO:0051287 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-2408508|Reactome: R-HSA-5578997 DB34_00985 d5e2163a908f522d4d7bd2b3c8a832f2 358 PIRSF PIRSF012641 1 358 1.5E-141 T 11-10-2018 IPR031321 Uncharacterised conserved protein UCP012641, putative zinc-binding metallo-peptidase DB34_00985 d5e2163a908f522d4d7bd2b3c8a832f2 358 Pfam PF10005 zinc-ribbon domain 4 99 4.1E-22 T 11-10-2018 IPR011201 Zinc-ribbon domain, bacteria DB34_00985 d5e2163a908f522d4d7bd2b3c8a832f2 358 Pfam PF15887 Putative zinc-binding metallo-peptidase 103 349 4.0E-108 T 11-10-2018 IPR031321 Uncharacterised conserved protein UCP012641, putative zinc-binding metallo-peptidase DB34_09335 78b5f4d9ff92fa50ec5462e7d94ea2fe 243 Pfam PF00149 Calcineurin-like phosphoesterase 21 140 2.2E-8 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 DB34_09335 78b5f4d9ff92fa50ec5462e7d94ea2fe 243 SUPERFAMILY SSF56300 19 234 6.77E-28 T 11-10-2018 DB34_09335 78b5f4d9ff92fa50ec5462e7d94ea2fe 243 Gene3D G3DSA:3.60.21.10 11 241 4.7E-36 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like DB34_11695 4e46ae3299583253cafdebe5e01ffd04 169 Gene3D G3DSA:3.30.420.10 1 167 3.6E-29 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DB34_11695 4e46ae3299583253cafdebe5e01ffd04 169 Pfam PF00929 Exonuclease 4 158 4.2E-11 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DB34_11695 4e46ae3299583253cafdebe5e01ffd04 169 SMART SM00479 1 167 3.4E-4 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DB34_11695 4e46ae3299583253cafdebe5e01ffd04 169 SUPERFAMILY SSF53098 1 163 4.0E-30 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily DB34_05910 d9f570565c6456eae014d54ba9d2d060 217 Gene3D G3DSA:3.10.450.50 52 182 8.1E-19 T 11-10-2018 DB34_05910 d9f570565c6456eae014d54ba9d2d060 217 Pfam PF05494 MlaC protein 49 208 8.9E-30 T 11-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC DB34_05910 d9f570565c6456eae014d54ba9d2d060 217 Gene3D G3DSA:1.10.10.640 79 207 8.1E-19 T 11-10-2018 DB34_01025 460a8d1137ffcb9a5f8110cfb044a69a 210 SUPERFAMILY SSF48498 83 195 8.31E-19 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DB34_01025 460a8d1137ffcb9a5f8110cfb044a69a 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 57 1.2E-14 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB34_01025 460a8d1137ffcb9a5f8110cfb044a69a 210 SUPERFAMILY SSF46689 3 69 2.15E-16 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB34_01025 460a8d1137ffcb9a5f8110cfb044a69a 210 Pfam PF16925 Bacterial transcriptional repressor C-terminal 102 194 1.4E-9 T 11-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal DB34_01025 460a8d1137ffcb9a5f8110cfb044a69a 210 Gene3D G3DSA:1.10.357.10 2 203 3.0E-56 T 11-10-2018 DB34_01025 460a8d1137ffcb9a5f8110cfb044a69a 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 1.4E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB34_01025 460a8d1137ffcb9a5f8110cfb044a69a 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 1.4E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB34_12550 f96023a1dfaf8b95d42d5d1d688b85a2 418 Gene3D G3DSA:1.20.210.10 21 413 6.5E-35 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB34_12550 f96023a1dfaf8b95d42d5d1d688b85a2 418 SUPERFAMILY SSF81442 24 403 1.96E-20 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB34_12550 f96023a1dfaf8b95d42d5d1d688b85a2 418 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 28 308 5.6E-11 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB34_01105 71cfd7a0de42e34c7277bd21189cffb4 303 SUPERFAMILY SSF103481 187 288 4.45E-12 T 11-10-2018 DB34_01105 71cfd7a0de42e34c7277bd21189cffb4 303 SUPERFAMILY SSF103481 41 140 3.27E-14 T 11-10-2018 DB34_01105 71cfd7a0de42e34c7277bd21189cffb4 303 Pfam PF00892 EamA-like transporter family 153 280 6.3E-8 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DB34_01105 71cfd7a0de42e34c7277bd21189cffb4 303 Pfam PF00892 EamA-like transporter family 7 137 1.1E-10 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DB34_09440 ed74abda183a28ff45e43d319ec229ab 230 SUPERFAMILY SSF53474 7 220 1.03E-12 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold DB34_09440 ed74abda183a28ff45e43d319ec229ab 230 Pfam PF12697 Alpha/beta hydrolase family 7 217 4.9E-8 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DB34_09440 ed74abda183a28ff45e43d319ec229ab 230 Gene3D G3DSA:3.40.50.1820 6 223 4.9E-14 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold DB34_13145 43b17e0e54d48dc351a22bdb8dc35957 176 Pfam PF06890 Bacteriophage Mu Gp45 protein 25 162 8.6E-29 T 11-10-2018 IPR014462 Phage-associated protein Gp45 DB34_13145 43b17e0e54d48dc351a22bdb8dc35957 176 PIRSF PIRSF012337 1 173 4.8E-28 T 11-10-2018 IPR014462 Phage-associated protein Gp45 DB34_01350 2ab2a1d1dba3350e55b21b772b51bbc9 261 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 11-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 DB34_01350 2ab2a1d1dba3350e55b21b772b51bbc9 261 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 246 4.4E-19 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase DB34_01350 2ab2a1d1dba3350e55b21b772b51bbc9 261 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 254 6.1E-61 T 11-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 DB34_01350 2ab2a1d1dba3350e55b21b772b51bbc9 261 Gene3D G3DSA:3.60.10.10 1 254 2.9E-64 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily DB34_01350 2ab2a1d1dba3350e55b21b772b51bbc9 261 SUPERFAMILY SSF56219 1 254 2.75E-68 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily DB34_01350 2ab2a1d1dba3350e55b21b772b51bbc9 261 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 253 2.9E-60 T 11-10-2018 DB34_04230 56e3098a62fd63561009dd6c0ca5bbf7 170 SUPERFAMILY SSF55729 10 147 1.72E-22 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase DB34_04230 56e3098a62fd63561009dd6c0ca5bbf7 170 Gene3D G3DSA:3.40.630.30 2 167 2.5E-20 T 11-10-2018 DB34_04230 56e3098a62fd63561009dd6c0ca5bbf7 170 Pfam PF00583 Acetyltransferase (GNAT) family 34 142 5.9E-11 T 11-10-2018 IPR000182 GNAT domain DB34_07335 2ef5cb69c91401ad6580c3be21c3fa1f 170 Gene3D G3DSA:3.30.70.560 6 169 6.1E-48 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 DB34_07335 2ef5cb69c91401ad6580c3be21c3fa1f 170 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 11 142 4.3E-31 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 DB34_07335 2ef5cb69c91401ad6580c3be21c3fa1f 170 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 10 142 4.9E-34 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 DB34_07335 2ef5cb69c91401ad6580c3be21c3fa1f 170 SUPERFAMILY SSF55083 8 164 5.62E-45 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 DB34_09595 d3ea0c114a57af4e89c7471a1236167a 161 PIRSF PIRSF032131 1 161 3.8E-43 T 11-10-2018 IPR009562 Protein of unknown function DUF1178 DB34_09595 d3ea0c114a57af4e89c7471a1236167a 161 Pfam PF06676 Protein of unknown function (DUF1178) 1 157 8.9E-52 T 11-10-2018 IPR009562 Protein of unknown function DUF1178 DB34_03230 1d4742a09e64b21227657b3bfe273cf3 285 SUPERFAMILY SSF48150 64 271 1.15E-67 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 DB34_03230 1d4742a09e64b21227657b3bfe273cf3 285 SMART SM00478 101 248 6.6E-54 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 DB34_03230 1d4742a09e64b21227657b3bfe273cf3 285 TIGRFAM TIGR01083 nth: endonuclease III 70 257 8.1E-77 T 11-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 DB34_03230 1d4742a09e64b21227657b3bfe273cf3 285 Gene3D G3DSA:1.10.1670.10 74 266 1.8E-71 T 11-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 DB34_03230 1d4742a09e64b21227657b3bfe273cf3 285 Gene3D G3DSA:1.10.340.30 84 195 1.8E-71 T 11-10-2018 DB34_03230 1d4742a09e64b21227657b3bfe273cf3 285 Hamap MF_00942 Endonuclease III [nth]. 59 272 35.612 T 11-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 DB34_03230 1d4742a09e64b21227657b3bfe273cf3 285 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 97 229 2.5E-21 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 DB34_03230 1d4742a09e64b21227657b3bfe273cf3 285 Pfam PF00633 Helix-hairpin-helix motif 163 190 2.3E-8 T 11-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 DB34_02625 e0c22c47036e0e7be71c16e132226802 488 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 116 136 9.0E-22 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DB34_02625 e0c22c47036e0e7be71c16e132226802 488 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 371 395 9.0E-22 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DB34_02625 e0c22c47036e0e7be71c16e132226802 488 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 467 487 9.0E-22 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DB34_02625 e0c22c47036e0e7be71c16e132226802 488 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 338 359 9.0E-22 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DB34_02625 e0c22c47036e0e7be71c16e132226802 488 Pfam PF13437 HlyD family secretion protein 325 439 2.3E-7 T 11-10-2018 DB34_02625 e0c22c47036e0e7be71c16e132226802 488 SUPERFAMILY SSF111369 108 164 3.92E-5 T 11-10-2018 DB34_02625 e0c22c47036e0e7be71c16e132226802 488 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 65 487 5.6E-96 T 11-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 DB34_02625 e0c22c47036e0e7be71c16e132226802 488 Gene3D G3DSA:2.40.30.170 342 470 2.5E-7 T 11-10-2018 DB34_02625 e0c22c47036e0e7be71c16e132226802 488 Gene3D G3DSA:2.40.30.170 92 102 9.4E-10 T 11-10-2018 DB34_02625 e0c22c47036e0e7be71c16e132226802 488 Gene3D G3DSA:2.40.50.100 103 232 9.4E-10 T 11-10-2018 DB34_02625 e0c22c47036e0e7be71c16e132226802 488 Gene3D G3DSA:1.10.287.470 138 223 9.4E-10 T 11-10-2018 DB34_09680 3299bee9172e75e4d5f61263092bad42 354 Gene3D G3DSA:3.30.1490.20 75 145 8.3E-7 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 DB34_09680 3299bee9172e75e4d5f61263092bad42 354 SUPERFAMILY SSF56059 96 288 4.27E-12 T 11-10-2018 DB34_09680 3299bee9172e75e4d5f61263092bad42 354 Pfam PF02222 ATP-grasp domain 95 160 6.5E-6 T 11-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type DB34_10665 04050adae8420f9ee25981a514bf5fc3 141 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 11 82 1.5E-19 T 11-10-2018 IPR025161 Putative transposase IS4/IS5 family DB34_01385 b1f783e49ac5f2b56d486fffbcdfe6e9 91 Gene3D G3DSA:1.10.10.1150 1 90 1.6E-29 T 11-10-2018 DB34_01385 b1f783e49ac5f2b56d486fffbcdfe6e9 91 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 27 87 4.9E-12 T 11-10-2018 IPR008792 Coenzyme PQQ synthesis D DB34_01385 b1f783e49ac5f2b56d486fffbcdfe6e9 91 TIGRFAM TIGR03859 PQQ_PqqD: coenzyme PQQ biosynthesis protein PqqD 9 88 7.6E-23 T 11-10-2018 IPR022479 Coenzyme PQQ synthesis D, bacteria GO:0018189|GO:0048038 DB34_08520 05edc9f8a13c15c30ab333e4725b8ac8 162 PIRSF PIRSF000239 2 159 4.9E-20 T 11-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DB34_08520 05edc9f8a13c15c30ab333e4725b8ac8 162 SUPERFAMILY SSF52833 6 158 2.06E-52 T 11-10-2018 IPR036249 Thioredoxin-like superfamily DB34_08520 05edc9f8a13c15c30ab333e4725b8ac8 162 Pfam PF00578 AhpC/TSA family 9 137 6.4E-39 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DB34_08520 05edc9f8a13c15c30ab333e4725b8ac8 162 Gene3D G3DSA:3.40.30.10 5 158 3.0E-51 T 11-10-2018 DB34_02865 a944adc8f140036706103def8c4eb024 510 Gene3D G3DSA:1.50.10.140 55 499 1.2E-159 T 11-10-2018 DB34_02865 a944adc8f140036706103def8c4eb024 510 PIRSF PIRSF028431 26 503 3.3E-161 T 11-10-2018 IPR016883 Uncharacterised conserved protein UCP028431 DB34_02865 a944adc8f140036706103def8c4eb024 510 Pfam PF10091 Putative glucoamylase 243 478 9.1E-82 T 11-10-2018 IPR019282 Domain of unknown function DUF2329 DB34_00840 ac9a4f4f762e9fdf44a09ca92e2b52e0 312 SUPERFAMILY SSF103481 197 281 2.48E-12 T 11-10-2018 DB34_00840 ac9a4f4f762e9fdf44a09ca92e2b52e0 312 Pfam PF00892 EamA-like transporter family 150 276 6.4E-11 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DB34_00840 ac9a4f4f762e9fdf44a09ca92e2b52e0 312 Pfam PF00892 EamA-like transporter family 8 141 2.4E-9 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DB34_00840 ac9a4f4f762e9fdf44a09ca92e2b52e0 312 SUPERFAMILY SSF103481 47 145 6.41E-11 T 11-10-2018 DB34_12665 81cc84215e498dc6659b506a5148e45b 173 SUPERFAMILY SSF46785 25 152 8.49E-24 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB34_12665 81cc84215e498dc6659b506a5148e45b 173 SMART SM00347 40 140 8.4E-16 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DB34_12665 81cc84215e498dc6659b506a5148e45b 173 Pfam PF12802 MarR family 46 104 3.4E-9 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DB34_12665 81cc84215e498dc6659b506a5148e45b 173 Gene3D G3DSA:1.10.10.10 16 157 2.1E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB34_05255 25bc354a7b036a90827f261f8b23540f 266 Pfam PF00557 Metallopeptidase family M24 17 244 1.8E-54 T 11-10-2018 IPR000994 Peptidase M24 DB34_05255 25bc354a7b036a90827f261f8b23540f 266 Gene3D G3DSA:3.90.230.10 1 256 8.1E-110 T 11-10-2018 DB34_05255 25bc354a7b036a90827f261f8b23540f 266 SUPERFAMILY SSF55920 8 251 6.41E-90 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like DB34_05255 25bc354a7b036a90827f261f8b23540f 266 Hamap MF_01974 Methionine aminopeptidase [map]. 7 253 40.705 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 DB34_05255 25bc354a7b036a90827f261f8b23540f 266 PRINTS PR00599 Methionine aminopeptidase-1 signature 164 176 3.3E-21 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DB34_05255 25bc354a7b036a90827f261f8b23540f 266 PRINTS PR00599 Methionine aminopeptidase-1 signature 72 85 3.3E-21 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DB34_05255 25bc354a7b036a90827f261f8b23540f 266 PRINTS PR00599 Methionine aminopeptidase-1 signature 94 110 3.3E-21 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DB34_05255 25bc354a7b036a90827f261f8b23540f 266 PRINTS PR00599 Methionine aminopeptidase-1 signature 195 207 3.3E-21 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DB34_05255 25bc354a7b036a90827f261f8b23540f 266 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 7 252 3.8E-96 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 DB34_05255 25bc354a7b036a90827f261f8b23540f 266 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 170 188 - T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 DB34_10300 bd0667a02fa21da49752d869838a6cd5 137 SUPERFAMILY SSF88946 1 55 7.46E-10 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DB34_10300 bd0667a02fa21da49752d869838a6cd5 137 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 1 124 5.8E-15 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DB34_10300 bd0667a02fa21da49752d869838a6cd5 137 Gene3D G3DSA:1.10.1740.10 1 44 9.6E-10 T 11-10-2018 DB34_10300 bd0667a02fa21da49752d869838a6cd5 137 SUPERFAMILY SSF88659 66 125 1.24E-11 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DB34_10300 bd0667a02fa21da49752d869838a6cd5 137 Gene3D G3DSA:1.10.10.10 64 131 6.6E-15 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB34_10300 bd0667a02fa21da49752d869838a6cd5 137 Pfam PF04542 Sigma-70 region 2 1 42 2.1E-6 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DB34_10300 bd0667a02fa21da49752d869838a6cd5 137 Pfam PF08281 Sigma-70, region 4 69 121 1.1E-10 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DB34_07850 3ace777396e030917ffe92a1763d40cb 505 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 139 158 3.0E-40 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_07850 3ace777396e030917ffe92a1763d40cb 505 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 238 262 3.0E-40 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_07850 3ace777396e030917ffe92a1763d40cb 505 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 326 345 3.0E-40 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_07850 3ace777396e030917ffe92a1763d40cb 505 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 169 193 3.0E-40 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_07850 3ace777396e030917ffe92a1763d40cb 505 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 378 404 3.0E-40 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_07850 3ace777396e030917ffe92a1763d40cb 505 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 6 484 1.5E-166 T 11-10-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_07850 3ace777396e030917ffe92a1763d40cb 505 Pfam PF00361 Proton-conducting membrane transporter 133 418 2.1E-73 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_08585 876182f2501444e0b48dec61f2f3b354 144 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 143 30.371 T 11-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 DB34_08585 876182f2501444e0b48dec61f2f3b354 144 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 142 8.6E-62 T 11-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_08585 876182f2501444e0b48dec61f2f3b354 144 SUPERFAMILY SSF54747 3 73 8.24E-31 T 11-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily DB34_08585 876182f2501444e0b48dec61f2f3b354 144 SUPERFAMILY SSF46906 68 141 1.03E-22 T 11-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily DB34_08585 876182f2501444e0b48dec61f2f3b354 144 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 5.0E-15 T 11-10-2018 DB34_08585 876182f2501444e0b48dec61f2f3b354 144 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 5.6E-30 T 11-10-2018 IPR020784 Ribosomal protein L11, N-terminal DB34_08585 876182f2501444e0b48dec61f2f3b354 144 Gene3D G3DSA:3.30.1550.10 2 72 2.2E-35 T 11-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily DB34_08585 876182f2501444e0b48dec61f2f3b354 144 ProSitePatterns PS00359 Ribosomal protein L11 signature. 128 143 - T 11-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_08585 876182f2501444e0b48dec61f2f3b354 144 SMART SM00649 9 142 1.0E-78 T 11-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 DB34_08585 876182f2501444e0b48dec61f2f3b354 144 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 141 1.0E-23 T 11-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 DB34_08585 876182f2501444e0b48dec61f2f3b354 144 Gene3D G3DSA:1.10.10.2720 73 144 7.9E-27 T 11-10-2018 DB34_11070 e616db21115f21e02bee09287f795d43 565 SUPERFAMILY SSF51971 123 356 5.77E-48 T 11-10-2018 DB34_11070 e616db21115f21e02bee09287f795d43 565 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 125 411 1.6E-30 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DB34_11070 e616db21115f21e02bee09287f795d43 565 SUPERFAMILY SSF46548 413 541 8.37E-15 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DB34_11070 e616db21115f21e02bee09287f795d43 565 Gene3D G3DSA:3.30.70.20 456 556 5.1E-9 T 11-10-2018 DB34_11070 e616db21115f21e02bee09287f795d43 565 Gene3D G3DSA:3.50.50.60 252 440 2.6E-26 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_11070 e616db21115f21e02bee09287f795d43 565 Gene3D G3DSA:3.50.50.60 125 244 3.9E-31 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_11070 e616db21115f21e02bee09287f795d43 565 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 35 114 6.5E-16 T 11-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 DB34_11070 e616db21115f21e02bee09287f795d43 565 Gene3D G3DSA:1.10.1060.10 4 124 1.1E-22 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DB34_11070 e616db21115f21e02bee09287f795d43 565 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 521 532 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DB34_11070 e616db21115f21e02bee09287f795d43 565 PRINTS PR00419 Adrenodoxin reductase family signature 126 148 2.4E-17 T 11-10-2018 DB34_11070 e616db21115f21e02bee09287f795d43 565 PRINTS PR00419 Adrenodoxin reductase family signature 149 162 2.4E-17 T 11-10-2018 DB34_11070 e616db21115f21e02bee09287f795d43 565 PRINTS PR00419 Adrenodoxin reductase family signature 257 271 2.4E-17 T 11-10-2018 DB34_11070 e616db21115f21e02bee09287f795d43 565 SUPERFAMILY SSF46548 35 135 1.94E-22 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DB34_05765 466e2f14b5da44b47bd16b8526a50eb1 430 Pfam PF02073 Thermophilic metalloprotease (M29) 24 426 7.3E-160 T 11-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 DB34_05765 466e2f14b5da44b47bd16b8526a50eb1 430 Gene3D G3DSA:3.40.1830.10 20 195 6.1E-58 T 11-10-2018 IPR035097 Peptidase M29, N-terminal DB34_05765 466e2f14b5da44b47bd16b8526a50eb1 430 SUPERFAMILY SSF144052 23 428 2.09E-137 T 11-10-2018 DB34_05765 466e2f14b5da44b47bd16b8526a50eb1 430 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 342 363 3.5E-70 T 11-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 DB34_05765 466e2f14b5da44b47bd16b8526a50eb1 430 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 407 426 3.5E-70 T 11-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 DB34_05765 466e2f14b5da44b47bd16b8526a50eb1 430 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 174 196 3.5E-70 T 11-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 DB34_05765 466e2f14b5da44b47bd16b8526a50eb1 430 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 381 403 3.5E-70 T 11-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 DB34_05765 466e2f14b5da44b47bd16b8526a50eb1 430 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 33 50 3.5E-70 T 11-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 DB34_05765 466e2f14b5da44b47bd16b8526a50eb1 430 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 263 282 3.5E-70 T 11-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 DB34_05765 466e2f14b5da44b47bd16b8526a50eb1 430 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 98 117 3.5E-70 T 11-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 DB34_05765 466e2f14b5da44b47bd16b8526a50eb1 430 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 319 339 3.5E-70 T 11-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 DB34_02780 fad3334227d8605fb6fd0ca1c6f1fd60 276 Gene3D G3DSA:3.40.50.300 28 274 3.8E-70 T 11-10-2018 DB34_02780 fad3334227d8605fb6fd0ca1c6f1fd60 276 SUPERFAMILY SSF52540 29 262 1.77E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_02780 fad3334227d8605fb6fd0ca1c6f1fd60 276 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 30 276 3.8E-117 T 11-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 DB34_02780 fad3334227d8605fb6fd0ca1c6f1fd60 276 Pfam PF00005 ABC transporter 45 201 1.7E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB34_02780 fad3334227d8605fb6fd0ca1c6f1fd60 276 SMART SM00382 54 264 6.3E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_02780 fad3334227d8605fb6fd0ca1c6f1fd60 276 ProSitePatterns PS00211 ABC transporters family signature. 173 187 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB34_09155 420126f829f6323e1a124c0a3726d2b4 567 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 91 479 4.3E-61 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain DB34_09155 420126f829f6323e1a124c0a3726d2b4 567 PIRSF PIRSF002741 3 566 9.5E-57 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DB34_09155 420126f829f6323e1a124c0a3726d2b4 567 SUPERFAMILY SSF53850 42 566 1.27E-94 T 11-10-2018 DB34_09155 420126f829f6323e1a124c0a3726d2b4 567 Gene3D G3DSA:3.10.105.10 305 538 2.0E-49 T 11-10-2018 DB34_09155 420126f829f6323e1a124c0a3726d2b4 567 Gene3D G3DSA:3.40.190.10 24 292 3.7E-54 T 11-10-2018 DB34_00310 128d8d7322f8f98912b580631ea9b6e2 104 SUPERFAMILY SSF141091 1 102 1.57E-37 T 11-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_00310 128d8d7322f8f98912b580631ea9b6e2 104 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 5.1E-41 T 11-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_00310 128d8d7322f8f98912b580631ea9b6e2 104 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 26.972 T 11-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_00310 128d8d7322f8f98912b580631ea9b6e2 104 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 102 2.1E-35 T 11-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_10350 9b67098f523c2fa9cd7f8d61531f9b73 337 Gene3D G3DSA:3.40.190.10 120 215 1.7E-51 T 11-10-2018 DB34_10350 9b67098f523c2fa9cd7f8d61531f9b73 337 Pfam PF09084 NMT1/THI5 like 50 252 1.0E-28 T 11-10-2018 IPR015168 SsuA/THI5-like DB34_10350 9b67098f523c2fa9cd7f8d61531f9b73 337 Gene3D G3DSA:3.40.190.10 41 308 1.7E-51 T 11-10-2018 DB34_10350 9b67098f523c2fa9cd7f8d61531f9b73 337 SUPERFAMILY SSF53850 40 260 5.22E-18 T 11-10-2018 DB34_04720 aaf1d2008566f1223c22006bc511dfd4 494 Pfam PF02321 Outer membrane efflux protein 307 487 2.2E-22 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DB34_04720 aaf1d2008566f1223c22006bc511dfd4 494 Pfam PF02321 Outer membrane efflux protein 75 278 8.0E-25 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DB34_04720 aaf1d2008566f1223c22006bc511dfd4 494 SUPERFAMILY SSF56954 10 490 1.01E-100 T 11-10-2018 DB34_04720 aaf1d2008566f1223c22006bc511dfd4 494 Gene3D G3DSA:2.20.200.10 112 378 5.3E-125 T 11-10-2018 DB34_04720 aaf1d2008566f1223c22006bc511dfd4 494 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 23 489 9.0E-109 T 11-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 DB34_04720 aaf1d2008566f1223c22006bc511dfd4 494 Gene3D G3DSA:1.20.1600.10 66 490 5.3E-125 T 11-10-2018 DB34_01210 ecb838dff8d7496b537e0ac76a0a18e1 221 Gene3D G3DSA:3.40.30.10 51 213 1.8E-51 T 11-10-2018 DB34_01210 ecb838dff8d7496b537e0ac76a0a18e1 221 SUPERFAMILY SSF52833 57 213 1.68E-44 T 11-10-2018 IPR036249 Thioredoxin-like superfamily DB34_01210 ecb838dff8d7496b537e0ac76a0a18e1 221 Pfam PF02630 SCO1/SenC 51 189 3.2E-38 T 11-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB34_08490 d42203851e72762d2244656c226783f9 213 Gene3D G3DSA:3.40.630.70 36 209 4.7E-59 T 11-10-2018 DB34_08490 d42203851e72762d2244656c226783f9 213 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 213 81.105 T 11-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 DB34_08490 d42203851e72762d2244656c226783f9 213 SUPERFAMILY SSF55729 3 197 5.83E-74 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase DB34_08490 d42203851e72762d2244656c226783f9 213 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 8 179 1.7E-64 T 11-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 DB34_08490 d42203851e72762d2244656c226783f9 213 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 10 193 3.3E-53 T 11-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 DB34_02915 22d020e081aab16afc4741eb1d1f5fe9 427 SUPERFAMILY SSF52540 108 381 1.73E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_02915 22d020e081aab16afc4741eb1d1f5fe9 427 Pfam PF07724 AAA domain (Cdc48 subfamily) 150 313 1.8E-28 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DB34_02915 22d020e081aab16afc4741eb1d1f5fe9 427 SMART SM00382 150 302 2.7E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_02915 22d020e081aab16afc4741eb1d1f5fe9 427 Gene3D G3DSA:3.40.50.300 84 319 7.8E-60 T 11-10-2018 DB34_02915 22d020e081aab16afc4741eb1d1f5fe9 427 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 154 172 1.3E-21 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 DB34_02915 22d020e081aab16afc4741eb1d1f5fe9 427 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 259 273 1.3E-21 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 DB34_02915 22d020e081aab16afc4741eb1d1f5fe9 427 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 196 214 1.3E-21 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 DB34_02915 22d020e081aab16afc4741eb1d1f5fe9 427 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 225 243 1.3E-21 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 DB34_13675 074519297d61c4525c27cba7418081e1 343 Gene3D G3DSA:1.10.150.130 20 116 2.6E-12 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal DB34_13675 074519297d61c4525c27cba7418081e1 343 SUPERFAMILY SSF56349 145 324 9.12E-38 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DB34_13675 074519297d61c4525c27cba7418081e1 343 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 24 107 3.4E-6 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 DB34_13675 074519297d61c4525c27cba7418081e1 343 Pfam PF00589 Phage integrase family 155 317 6.4E-28 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 DB34_13675 074519297d61c4525c27cba7418081e1 343 Gene3D G3DSA:1.10.443.10 140 338 1.6E-34 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 DB34_13675 074519297d61c4525c27cba7418081e1 343 SUPERFAMILY SSF47823 29 106 1.84E-6 T 11-10-2018 DB34_08075 44346907854bd576174da5a5a8e757d3 251 SUPERFAMILY SSF53218 5 197 2.09E-36 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily DB34_08075 44346907854bd576174da5a5a8e757d3 251 Gene3D G3DSA:3.40.980.10 3 166 1.3E-49 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily DB34_08075 44346907854bd576174da5a5a8e757d3 251 Pfam PF00994 Probable molybdopterin binding domain 7 164 4.1E-29 T 11-10-2018 IPR001453 MoaB/Mog domain DB34_08075 44346907854bd576174da5a5a8e757d3 251 SMART SM00852 6 166 1.2E-27 T 11-10-2018 IPR001453 MoaB/Mog domain DB34_09735 f436e5de4b3761fbf4426eec1d4b432d 212 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 33 119 1.2E-28 T 11-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 DB34_09735 f436e5de4b3761fbf4426eec1d4b432d 212 SUPERFAMILY SSF50475 17 212 4.27E-66 T 11-10-2018 DB34_09735 f436e5de4b3761fbf4426eec1d4b432d 212 PIRSF PIRSF000190 13 212 3.7E-75 T 11-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 DB34_09735 f436e5de4b3761fbf4426eec1d4b432d 212 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 20 212 7.1E-74 T 11-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 DB34_09735 f436e5de4b3761fbf4426eec1d4b432d 212 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 182 195 - T 11-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 DB34_09735 f436e5de4b3761fbf4426eec1d4b432d 212 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 172 212 9.5E-16 T 11-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 DB34_09735 f436e5de4b3761fbf4426eec1d4b432d 212 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 5 212 37.958 T 11-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 DB34_09735 f436e5de4b3761fbf4426eec1d4b432d 212 Gene3D G3DSA:2.30.110.10 12 212 1.5E-80 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 DB34_10455 9f3932c1b6f3cb95d2186b2df4352eaf 472 SUPERFAMILY SSF51905 35 353 2.59E-29 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_10455 9f3932c1b6f3cb95d2186b2df4352eaf 472 Gene3D G3DSA:3.50.50.60 24 376 2.9E-34 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_10455 9f3932c1b6f3cb95d2186b2df4352eaf 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 218 243 5.8E-5 T 11-10-2018 DB34_10455 9f3932c1b6f3cb95d2186b2df4352eaf 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 35 57 5.8E-5 T 11-10-2018 DB34_10455 9f3932c1b6f3cb95d2186b2df4352eaf 472 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 118 253 1.8E-13 T 11-10-2018 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase DB34_10925 e0d312b6604d2af495ec956fe4ae402a 414 SUPERFAMILY SSF53335 225 408 1.27E-30 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB34_10925 e0d312b6604d2af495ec956fe4ae402a 414 PIRSF PIRSF036428 10 412 4.3E-133 T 11-10-2018 IPR006365 Cobalamin (vitamin B12) biosynthesis CobL/Precorrin-6Y C(5,15)-methyltransferase GO:0008276|GO:0009236 KEGG: 00860+2.1.1.132 DB34_10925 e0d312b6604d2af495ec956fe4ae402a 414 SUPERFAMILY SSF53790 13 214 5.63E-39 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 DB34_10925 e0d312b6604d2af495ec956fe4ae402a 414 TIGRFAM TIGR02467 CbiE: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 16 203 8.6E-43 T 11-10-2018 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase GO:0008276|GO:0009236 DB34_10925 e0d312b6604d2af495ec956fe4ae402a 414 Gene3D G3DSA:3.40.50.150 236 411 3.9E-68 T 11-10-2018 DB34_10925 e0d312b6604d2af495ec956fe4ae402a 414 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 249 359 2.7E-5 T 11-10-2018 DB34_10925 e0d312b6604d2af495ec956fe4ae402a 414 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 14 193 6.4E-15 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 DB34_10925 e0d312b6604d2af495ec956fe4ae402a 414 TIGRFAM TIGR02469 CbiT: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 241 361 3.8E-34 T 11-10-2018 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit GO:0008276|GO:0009236 KEGG: 00860+2.1.1.196|MetaCyc: PWY-7377 DB34_10925 e0d312b6604d2af495ec956fe4ae402a 414 Gene3D G3DSA:3.40.1010.10 13 112 5.1E-14 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 DB34_07935 e4cdb79448da22a351df16baaaad6f79 732 Pfam PF03772 Competence protein 256 538 4.2E-58 T 11-10-2018 IPR004477 ComEC/Rec2-related protein DB34_07935 e4cdb79448da22a351df16baaaad6f79 732 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 276 470 6.3E-19 T 11-10-2018 IPR004477 ComEC/Rec2-related protein DB34_02430 b19922a393e09f005dd5bcdb35a854bc 150 SMART SM00347 35 135 2.0E-8 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DB34_02430 b19922a393e09f005dd5bcdb35a854bc 150 Gene3D G3DSA:1.10.10.10 2 148 8.8E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB34_02430 b19922a393e09f005dd5bcdb35a854bc 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 59 75 4.7E-5 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DB34_02430 b19922a393e09f005dd5bcdb35a854bc 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 95 111 4.7E-5 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DB34_02430 b19922a393e09f005dd5bcdb35a854bc 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 76 91 4.7E-5 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DB34_02430 b19922a393e09f005dd5bcdb35a854bc 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 125 145 4.7E-5 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DB34_02430 b19922a393e09f005dd5bcdb35a854bc 150 Pfam PF01047 MarR family 42 99 7.3E-7 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DB34_02430 b19922a393e09f005dd5bcdb35a854bc 150 SUPERFAMILY SSF46785 11 147 4.07E-26 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB34_13650 dd242eb4b243dfedd3ee1c2f1f37420b 461 SUPERFAMILY SSF53098 155 398 1.37E-5 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily DB34_13650 dd242eb4b243dfedd3ee1c2f1f37420b 461 Pfam PF13701 Transposase DDE domain group 1 13 458 2.2E-165 T 11-10-2018 IPR025668 Transposase DDE domain DB34_06025 d0ef63a92c1df55065fad38f326c104d 753 Gene3D G3DSA:2.40.170.20 206 753 2.3E-42 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DB34_06025 d0ef63a92c1df55065fad38f326c104d 753 SUPERFAMILY SSF56935 58 753 1.98E-66 T 11-10-2018 DB34_06025 d0ef63a92c1df55065fad38f326c104d 753 Pfam PF00593 TonB dependent receptor 325 750 2.3E-24 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel DB34_11765 e3928a3e34095efdc75645885ba316f8 326 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB34_11765 e3928a3e34095efdc75645885ba316f8 326 Pfam PF00005 ABC transporter 32 187 8.1E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB34_11765 e3928a3e34095efdc75645885ba316f8 326 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 237 324 4.8E-27 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DB34_11765 e3928a3e34095efdc75645885ba316f8 326 SMART SM00382 40 237 6.7E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_11765 e3928a3e34095efdc75645885ba316f8 326 SUPERFAMILY SSF52540 10 258 2.04E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_11765 e3928a3e34095efdc75645885ba316f8 326 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 239 303 3.3E-17 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DB34_11765 e3928a3e34095efdc75645885ba316f8 326 Gene3D G3DSA:3.40.50.300 8 326 1.1E-103 T 11-10-2018 DB34_07195 9e72b1bb3906fb47c89fee8c17a96c13 340 Gene3D G3DSA:2.30.30.40 160 222 1.6E-5 T 11-10-2018 DB34_07195 9e72b1bb3906fb47c89fee8c17a96c13 340 Pfam PF06347 Bacterial SH3 domain 169 223 1.2E-13 T 11-10-2018 IPR010466 Protein of unknown function DUF1058 DB34_07195 9e72b1bb3906fb47c89fee8c17a96c13 340 Pfam PF06347 Bacterial SH3 domain 278 330 2.2E-10 T 11-10-2018 IPR010466 Protein of unknown function DUF1058 DB34_07195 9e72b1bb3906fb47c89fee8c17a96c13 340 Gene3D G3DSA:2.30.30.40 273 328 4.2E-5 T 11-10-2018 DB34_04985 9c90f9ad99e1e5328eeee792b8598af8 165 Pfam PF01161 Phosphatidylethanolamine-binding protein 22 159 2.5E-39 T 11-10-2018 IPR008914 Phosphatidylethanolamine-binding protein DB34_04985 9c90f9ad99e1e5328eeee792b8598af8 165 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 22 159 3.8E-49 T 11-10-2018 IPR005247 YbhB/YbcL DB34_04985 9c90f9ad99e1e5328eeee792b8598af8 165 Gene3D G3DSA:3.90.280.10 1 160 6.4E-58 T 11-10-2018 IPR036610 PEBP-like superfamily DB34_04985 9c90f9ad99e1e5328eeee792b8598af8 165 SUPERFAMILY SSF49777 5 159 1.23E-53 T 11-10-2018 IPR036610 PEBP-like superfamily DB34_01140 930b50e2937eea094b1cc2b050478efe 135 Gene3D G3DSA:2.40.50.100 55 132 5.8E-11 T 11-10-2018 DB34_01140 930b50e2937eea094b1cc2b050478efe 135 SUPERFAMILY SSF51230 58 132 5.89E-12 T 11-10-2018 IPR011053 Single hybrid motif DB34_01140 930b50e2937eea094b1cc2b050478efe 135 Pfam PF00364 Biotin-requiring enzyme 59 132 4.1E-9 T 11-10-2018 IPR000089 Biotin/lipoyl attachment DB34_05105 8ae04e1449701b2f971fd865aa9b5719 616 TIGRFAM TIGR01686 FkbH: FkbH domain 264 585 2.0E-63 T 11-10-2018 IPR010037 FkbH domain DB34_05105 8ae04e1449701b2f971fd865aa9b5719 616 SUPERFAMILY SSF56784 263 396 1.79E-17 T 11-10-2018 IPR036412 HAD-like superfamily DB34_05105 8ae04e1449701b2f971fd865aa9b5719 616 TIGRFAM TIGR01681 HAD-SF-IIIC: HAD phosphatase, family IIIC 265 386 1.2E-17 T 11-10-2018 IPR010033 HAD-superfamily phosphatase, subfamily IIIC DB34_05105 8ae04e1449701b2f971fd865aa9b5719 616 Pfam PF00702 haloacid dehalogenase-like hydrolase 300 383 1.4E-6 T 11-10-2018 DB34_05105 8ae04e1449701b2f971fd865aa9b5719 616 Gene3D G3DSA:3.40.50.1110 90 216 5.1E-7 T 11-10-2018 IPR036514 SGNH hydrolase superfamily DB34_05105 8ae04e1449701b2f971fd865aa9b5719 616 Gene3D G3DSA:3.40.50.1000 263 426 7.8E-45 T 11-10-2018 IPR023214 HAD superfamily DB34_03555 52a956a7bf9ab11b0dd75ace7b50fce9 108 Gene3D G3DSA:3.40.30.10 1 107 5.5E-36 T 11-10-2018 DB34_03555 52a956a7bf9ab11b0dd75ace7b50fce9 108 PIRSF PIRSF000077 2 108 1.3E-42 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 DB34_03555 52a956a7bf9ab11b0dd75ace7b50fce9 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 DB34_03555 52a956a7bf9ab11b0dd75ace7b50fce9 108 Pfam PF00085 Thioredoxin 6 105 7.5E-34 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 DB34_03555 52a956a7bf9ab11b0dd75ace7b50fce9 108 PRINTS PR00421 Thioredoxin family signature 24 32 4.3E-8 T 11-10-2018 DB34_03555 52a956a7bf9ab11b0dd75ace7b50fce9 108 PRINTS PR00421 Thioredoxin family signature 72 83 4.3E-8 T 11-10-2018 DB34_03555 52a956a7bf9ab11b0dd75ace7b50fce9 108 PRINTS PR00421 Thioredoxin family signature 32 41 4.3E-8 T 11-10-2018 DB34_03555 52a956a7bf9ab11b0dd75ace7b50fce9 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 105 6.9E-39 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 DB34_03555 52a956a7bf9ab11b0dd75ace7b50fce9 108 SUPERFAMILY SSF52833 4 108 3.13E-38 T 11-10-2018 IPR036249 Thioredoxin-like superfamily DB34_08115 56aa2f7b0ab5db7e35604cd4160acddc 165 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 16 33 3.7E-6 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 DB34_08115 56aa2f7b0ab5db7e35604cd4160acddc 165 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 137 155 3.7E-6 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 DB34_08115 56aa2f7b0ab5db7e35604cd4160acddc 165 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 14 155 1.2E-32 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 DB34_08115 56aa2f7b0ab5db7e35604cd4160acddc 165 Hamap MF_00821 Protein-export protein SecB [secB]. 1 159 28.575 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 DB34_08115 56aa2f7b0ab5db7e35604cd4160acddc 165 SUPERFAMILY SSF54611 5 154 1.81E-38 T 11-10-2018 IPR035958 SecB-like superfamily DB34_08115 56aa2f7b0ab5db7e35604cd4160acddc 165 Pfam PF02556 Preprotein translocase subunit SecB 13 156 2.1E-47 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 DB34_08115 56aa2f7b0ab5db7e35604cd4160acddc 165 Gene3D G3DSA:3.10.420.10 1 164 3.0E-50 T 11-10-2018 IPR035958 SecB-like superfamily DB34_10375 3a70e5b186543cb1875ae23693ea96ea 441 Gene3D G3DSA:3.20.20.140 48 423 1.2E-139 T 11-10-2018 DB34_10375 3a70e5b186543cb1875ae23693ea96ea 441 SUPERFAMILY SSF51338 5 438 1.67E-22 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DB34_10375 3a70e5b186543cb1875ae23693ea96ea 441 Gene3D G3DSA:2.30.40.10 1 418 1.2E-139 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DB34_10375 3a70e5b186543cb1875ae23693ea96ea 441 SUPERFAMILY SSF51556 46 362 2.27E-92 T 11-10-2018 IPR032466 Metal-dependent hydrolase DB34_10375 3a70e5b186543cb1875ae23693ea96ea 441 Pfam PF01979 Amidohydrolase family 43 411 3.9E-62 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 DB34_02280 f524c5229ae6291131dbab1ded0358f0 344 Pfam PF03824 High-affinity nickel-transport protein 49 337 1.5E-81 T 11-10-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 DB34_02280 f524c5229ae6291131dbab1ded0358f0 344 TIGRFAM TIGR00802 nico: transition metal uptake transporter, Ni2+-Co2+ transporter (NiCoT) family 52 332 3.4E-115 T 11-10-2018 IPR004688 Transition metal uptake transporter nickel/cobalt GO:0015099|GO:0016021|GO:0035444|GO:0046872 DB34_03705 02b983d87de34361cd8599000b94df44 166 Pfam PF10722 Putative bacterial sensory transduction regulator 15 142 7.5E-27 T 11-10-2018 IPR019660 Putative sensory transduction regulator YbjN DB34_03645 586996074aab01dfa70586b3ef9b2fe5 168 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 154 44.643 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 DB34_03645 586996074aab01dfa70586b3ef9b2fe5 168 Gene3D G3DSA:3.30.420.10 4 159 2.0E-44 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DB34_03645 586996074aab01dfa70586b3ef9b2fe5 168 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 156 4.2E-44 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 DB34_03645 586996074aab01dfa70586b3ef9b2fe5 168 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 108 127 2.2E-31 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 DB34_03645 586996074aab01dfa70586b3ef9b2fe5 168 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 62 78 2.2E-31 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 DB34_03645 586996074aab01dfa70586b3ef9b2fe5 168 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 139 151 2.2E-31 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 DB34_03645 586996074aab01dfa70586b3ef9b2fe5 168 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 84 100 2.2E-31 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 DB34_03645 586996074aab01dfa70586b3ef9b2fe5 168 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 2.2E-31 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 DB34_03645 586996074aab01dfa70586b3ef9b2fe5 168 SUPERFAMILY SSF53098 3 155 5.69E-49 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily DB34_03645 586996074aab01dfa70586b3ef9b2fe5 168 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 114 148 - T 11-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 DB34_03645 586996074aab01dfa70586b3ef9b2fe5 168 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 5 151 5.3E-45 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 DB34_03380 de088f46f95d0da37f6244fc7f8ec592 185 Gene3D G3DSA:2.40.50.140 2 120 2.3E-46 T 11-10-2018 DB34_03380 de088f46f95d0da37f6244fc7f8ec592 185 Hamap MF_00984 Single-stranded DNA-binding protein. 5 118 33.477 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 DB34_03380 de088f46f95d0da37f6244fc7f8ec592 185 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 185 7.9E-47 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 DB34_03380 de088f46f95d0da37f6244fc7f8ec592 185 Pfam PF00436 Single-strand binding protein family 5 107 1.2E-37 T 11-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 DB34_03380 de088f46f95d0da37f6244fc7f8ec592 185 SUPERFAMILY SSF50249 4 185 8.57E-52 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB34_00020 4acd262534b85a42f3877b31d6fc719e 311 SUPERFAMILY SSF50630 44 153 6.52E-9 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily DB34_00020 4acd262534b85a42f3877b31d6fc719e 311 Pfam PF13650 Aspartyl protease 195 286 2.7E-9 T 11-10-2018 DB34_00020 4acd262534b85a42f3877b31d6fc719e 311 Pfam PF13650 Aspartyl protease 50 144 3.7E-10 T 11-10-2018 DB34_00020 4acd262534b85a42f3877b31d6fc719e 311 SUPERFAMILY SSF50630 187 294 4.57E-10 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily DB34_00020 4acd262534b85a42f3877b31d6fc719e 311 Gene3D G3DSA:2.40.70.10 191 308 8.8E-18 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily DB34_00020 4acd262534b85a42f3877b31d6fc719e 311 Gene3D G3DSA:2.40.70.10 47 168 1.0E-15 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily DB34_03085 b2e78548c3fc43ff37793386aa8a3370 847 Gene3D G3DSA:3.40.1360.10 123 235 3.7E-9 T 11-10-2018 DB34_03085 b2e78548c3fc43ff37793386aa8a3370 847 Pfam PF06048 Domain of unknown function (DUF927) 268 555 6.2E-82 T 11-10-2018 IPR009270 Domain of unknown function DUF927 DB34_04045 c2da6e49522896ff654e9f97becf7171 279 Pfam PF02633 Creatinine amidohydrolase 43 270 7.8E-40 T 11-10-2018 IPR003785 Creatininase/formamide hydrolase KEGG: 00740+3.5.1.102|MetaCyc: PWY-6167 DB34_04045 c2da6e49522896ff654e9f97becf7171 279 Gene3D G3DSA:3.40.50.10310 36 277 7.5E-46 T 11-10-2018 IPR024087 Creatininase-like superfamily KEGG: 00740+3.5.1.102|MetaCyc: PWY-6167 DB34_04045 c2da6e49522896ff654e9f97becf7171 279 SUPERFAMILY SSF102215 38 275 1.96E-51 T 11-10-2018 IPR024087 Creatininase-like superfamily KEGG: 00740+3.5.1.102|MetaCyc: PWY-6167 DB34_03445 541ad404ebed65159260a68041945f69 715 Gene3D G3DSA:3.40.640.10 246 498 1.7E-8 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB34_03445 541ad404ebed65159260a68041945f69 715 SUPERFAMILY SSF53383 190 480 7.43E-11 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB34_03500 5384e68578bcda6d8921604cc9898b2d 223 SUPERFAMILY SSF52833 7 81 1.05E-12 T 11-10-2018 IPR036249 Thioredoxin-like superfamily DB34_03500 5384e68578bcda6d8921604cc9898b2d 223 Gene3D G3DSA:3.40.30.10 6 203 2.3E-45 T 11-10-2018 DB34_03500 5384e68578bcda6d8921604cc9898b2d 223 Gene3D G3DSA:1.20.1050.10 83 197 2.3E-45 T 11-10-2018 DB34_03500 5384e68578bcda6d8921604cc9898b2d 223 Pfam PF13409 Glutathione S-transferase, N-terminal domain 14 77 1.2E-9 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 DB34_03500 5384e68578bcda6d8921604cc9898b2d 223 SUPERFAMILY SSF47616 83 206 9.81E-15 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DB34_12255 c05478e1eb45765eec712045fa43ddab 240 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB34_12255 c05478e1eb45765eec712045fa43ddab 240 Gene3D G3DSA:3.40.50.300 4 235 1.2E-62 T 11-10-2018 DB34_12255 c05478e1eb45765eec712045fa43ddab 240 SMART SM00382 36 224 1.5E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_12255 c05478e1eb45765eec712045fa43ddab 240 SUPERFAMILY SSF52540 6 229 1.9E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_12255 c05478e1eb45765eec712045fa43ddab 240 Pfam PF00005 ABC transporter 27 175 2.2E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB34_00645 ef425ad48701e23826386c1e4252027a 461 Pfam PF04715 Anthranilate synthase component I, N terminal region 12 149 6.5E-13 T 11-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DB34_00645 ef425ad48701e23826386c1e4252027a 461 SUPERFAMILY SSF56322 13 456 2.75E-123 T 11-10-2018 IPR005801 ADC synthase GO:0009058 DB34_00645 ef425ad48701e23826386c1e4252027a 461 Gene3D G3DSA:3.60.120.10 2 457 6.1E-134 T 11-10-2018 IPR005801 ADC synthase GO:0009058 DB34_00645 ef425ad48701e23826386c1e4252027a 461 Pfam PF00425 chorismate binding enzyme 193 450 6.2E-90 T 11-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal DB34_00645 ef425ad48701e23826386c1e4252027a 461 PRINTS PR00095 Anthranilate synthase component I signature 407 421 6.5E-12 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DB34_00645 ef425ad48701e23826386c1e4252027a 461 PRINTS PR00095 Anthranilate synthase component I signature 312 325 6.5E-12 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DB34_00645 ef425ad48701e23826386c1e4252027a 461 PRINTS PR00095 Anthranilate synthase component I signature 392 406 6.5E-12 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DB34_00645 ef425ad48701e23826386c1e4252027a 461 PRINTS PR00095 Anthranilate synthase component I signature 298 311 6.5E-12 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DB34_08940 523fa95d4f7f0d3044f64f22c82cfe1a 193 SUPERFAMILY SSF55729 48 175 3.42E-15 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase DB34_08940 523fa95d4f7f0d3044f64f22c82cfe1a 193 Gene3D G3DSA:3.40.630.30 48 182 4.9E-13 T 11-10-2018 DB34_05965 fece7d337eef104b3cec840aeac0b186 192 Pfam PF09335 SNARE associated Golgi protein 38 155 1.0E-8 T 11-10-2018 IPR032816 SNARE associated Golgi protein DB34_09975 8f969e27621f22dccc6063ee69c794ed 112 Gene3D G3DSA:3.40.30.10 8 103 2.7E-35 T 11-10-2018 DB34_09975 8f969e27621f22dccc6063ee69c794ed 112 Pfam PF00462 Glutaredoxin 18 82 1.4E-19 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 DB34_09975 8f969e27621f22dccc6063ee69c794ed 112 PIRSF PIRSF005894 1 109 3.4E-50 T 11-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 DB34_09975 8f969e27621f22dccc6063ee69c794ed 112 SUPERFAMILY SSF52833 5 105 2.25E-35 T 11-10-2018 IPR036249 Thioredoxin-like superfamily DB34_09975 8f969e27621f22dccc6063ee69c794ed 112 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 6 102 1.8E-47 T 11-10-2018 IPR004480 Monothiol glutaredoxin-related DB34_09710 a8fe57993e066ec6bc7bbb06897b897c 314 Gene3D G3DSA:3.40.50.300 10 174 2.7E-46 T 11-10-2018 DB34_09710 a8fe57993e066ec6bc7bbb06897b897c 314 SUPERFAMILY SSF52540 11 213 6.09E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_09710 a8fe57993e066ec6bc7bbb06897b897c 314 Pfam PF13177 DNA polymerase III, delta subunit 14 174 2.2E-36 T 11-10-2018 DB34_07060 497e152966d5d1cc84395e1b65c1a646 305 Gene3D G3DSA:3.40.50.300 13 282 1.9E-96 T 11-10-2018 DB34_07060 497e152966d5d1cc84395e1b65c1a646 305 SUPERFAMILY SSF52540 81 269 2.57E-30 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_07060 497e152966d5d1cc84395e1b65c1a646 305 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 52 274 6.8E-115 T 11-10-2018 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 KEGG: 00190+2.7.4.1 DB34_07060 497e152966d5d1cc84395e1b65c1a646 305 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 52 273 1.3E-109 T 11-10-2018 IPR022488 Polyphosphate kinase-2-related DB34_07060 497e152966d5d1cc84395e1b65c1a646 305 PIRSF PIRSF028756 18 305 5.0E-134 T 11-10-2018 IPR016898 Polyphosphate kinase 2 KEGG: 00190+2.7.4.1 DB34_02705 bb260e2bb40a50229b9d444f72fa4eb0 249 ProSitePatterns PS00449 ATP synthase a subunit signature. 173 182 - T 11-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB34_02705 bb260e2bb40a50229b9d444f72fa4eb0 249 Pfam PF00119 ATP synthase A chain 33 243 9.5E-58 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB34_02705 bb260e2bb40a50229b9d444f72fa4eb0 249 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 10 246 7.2E-63 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB34_02705 bb260e2bb40a50229b9d444f72fa4eb0 249 SUPERFAMILY SSF81336 82 243 3.4E-45 T 11-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB34_02705 bb260e2bb40a50229b9d444f72fa4eb0 249 Gene3D G3DSA:1.20.120.220 82 249 1.3E-36 T 11-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB34_02705 bb260e2bb40a50229b9d444f72fa4eb0 249 Hamap MF_01393 ATP synthase subunit a [atpB]. 11 249 15.342 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB34_02705 bb260e2bb40a50229b9d444f72fa4eb0 249 PRINTS PR00123 ATP synthase A subunit signature 230 245 1.3E-26 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB34_02705 bb260e2bb40a50229b9d444f72fa4eb0 249 PRINTS PR00123 ATP synthase A subunit signature 89 105 1.3E-26 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB34_02705 bb260e2bb40a50229b9d444f72fa4eb0 249 PRINTS PR00123 ATP synthase A subunit signature 150 165 1.3E-26 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB34_02705 bb260e2bb40a50229b9d444f72fa4eb0 249 PRINTS PR00123 ATP synthase A subunit signature 170 192 1.3E-26 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB34_10080 8a60f7db0f9cee21e24dec6464b17aa5 370 SUPERFAMILY SSF52418 91 365 1.96E-79 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 DB34_10080 8a60f7db0f9cee21e24dec6464b17aa5 370 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 23 360 4.4E-101 T 11-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 DB34_10080 8a60f7db0f9cee21e24dec6464b17aa5 370 Gene3D G3DSA:1.20.970.10 20 84 9.9E-18 T 11-10-2018 DB34_10080 8a60f7db0f9cee21e24dec6464b17aa5 370 SUPERFAMILY SSF47648 19 84 1.7E-16 T 11-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 DB34_10080 8a60f7db0f9cee21e24dec6464b17aa5 370 Gene3D G3DSA:3.40.1030.10 88 368 1.4E-91 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 DB34_10080 8a60f7db0f9cee21e24dec6464b17aa5 370 Pfam PF02885 Glycosyl transferase family, helical bundle domain 20 79 9.0E-17 T 11-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 DB34_10080 8a60f7db0f9cee21e24dec6464b17aa5 370 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 20 364 34.646 T 11-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 DB34_10080 8a60f7db0f9cee21e24dec6464b17aa5 370 Pfam PF00591 Glycosyl transferase family, a/b domain 90 354 5.0E-75 T 11-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 DB34_02080 93be283c61355344da52b52c72b69eba 190 SMART SM00248 96 125 100.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 DB34_02080 93be283c61355344da52b52c72b69eba 190 SMART SM00248 129 158 0.0047 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 DB34_02080 93be283c61355344da52b52c72b69eba 190 SMART SM00248 29 59 470.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 DB34_02080 93be283c61355344da52b52c72b69eba 190 SMART SM00248 63 92 2.9E-4 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 DB34_02080 93be283c61355344da52b52c72b69eba 190 Gene3D G3DSA:1.25.40.20 22 189 1.0E-43 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily DB34_02080 93be283c61355344da52b52c72b69eba 190 SUPERFAMILY SSF48403 35 182 3.48E-37 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily DB34_02080 93be283c61355344da52b52c72b69eba 190 Pfam PF13857 Ankyrin repeats (many copies) 51 101 2.0E-9 T 11-10-2018 DB34_02080 93be283c61355344da52b52c72b69eba 190 Pfam PF13857 Ankyrin repeats (many copies) 116 170 1.9E-7 T 11-10-2018 DB34_02110 6bfa097e6fb3b896ab4acb3e3a49b8dd 237 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 13 229 7.3E-78 T 11-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 DB34_02110 6bfa097e6fb3b896ab4acb3e3a49b8dd 237 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 58 228 4.1E-60 T 11-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 DB34_02110 6bfa097e6fb3b896ab4acb3e3a49b8dd 237 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 9 232 31.653 T 11-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 DB34_02110 6bfa097e6fb3b896ab4acb3e3a49b8dd 237 Gene3D G3DSA:3.30.70.260 130 203 7.0E-79 T 11-10-2018 DB34_02110 6bfa097e6fb3b896ab4acb3e3a49b8dd 237 SUPERFAMILY SSF100950 11 157 8.37E-42 T 11-10-2018 IPR037171 NagB/RpiA transferase-like DB34_02110 6bfa097e6fb3b896ab4acb3e3a49b8dd 237 Gene3D G3DSA:3.40.50.1360 13 222 7.0E-79 T 11-10-2018 DB34_02110 6bfa097e6fb3b896ab4acb3e3a49b8dd 237 SUPERFAMILY SSF75445 139 215 1.26E-21 T 11-10-2018 DB34_10485 552ffbb38f9189aa8a296e68798b82a9 327 Gene3D G3DSA:2.40.50.100 47 221 1.6E-35 T 11-10-2018 DB34_10485 552ffbb38f9189aa8a296e68798b82a9 327 Gene3D G3DSA:2.40.30.170 222 306 1.6E-35 T 11-10-2018 DB34_10485 552ffbb38f9189aa8a296e68798b82a9 327 Pfam PF13533 Biotin-lipoyl like 49 94 4.1E-7 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain DB34_10485 552ffbb38f9189aa8a296e68798b82a9 327 Gene3D G3DSA:1.10.287.470 81 186 1.6E-35 T 11-10-2018 DB34_10485 552ffbb38f9189aa8a296e68798b82a9 327 Pfam PF13437 HlyD family secretion protein 186 302 5.9E-11 T 11-10-2018 DB34_10485 552ffbb38f9189aa8a296e68798b82a9 327 SUPERFAMILY SSF111369 46 224 8.89E-11 T 11-10-2018 DB34_11080 b84983cd38642033408351d1d9abcec9 224 SUPERFAMILY SSF46689 28 107 5.64E-14 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB34_11080 b84983cd38642033408351d1d9abcec9 224 Pfam PF00440 Bacterial regulatory proteins, tetR family 42 84 1.0E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB34_11080 b84983cd38642033408351d1d9abcec9 224 Gene3D G3DSA:1.10.357.10 27 200 1.9E-16 T 11-10-2018 DB34_09010 a3be9eb26b613dc2d23eca27afa4b4b6 271 PIRSF PIRSF003092 1 270 1.5E-87 T 11-10-2018 IPR025501 ATP binding protein MinD DB34_09010 a3be9eb26b613dc2d23eca27afa4b4b6 271 Gene3D G3DSA:3.40.50.300 1 257 2.9E-70 T 11-10-2018 DB34_09010 a3be9eb26b613dc2d23eca27afa4b4b6 271 Pfam PF13614 AAA domain 3 166 9.5E-23 T 11-10-2018 IPR025669 AAA domain DB34_09010 a3be9eb26b613dc2d23eca27afa4b4b6 271 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 266 3.7E-106 T 11-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 DB34_09010 a3be9eb26b613dc2d23eca27afa4b4b6 271 SUPERFAMILY SSF52540 1 252 1.14E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_01380 82d82a3eeb15facdd54b75e90e3b4292 246 SUPERFAMILY SSF48613 2 244 1.29E-62 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 DB34_01380 82d82a3eeb15facdd54b75e90e3b4292 246 Hamap MF_00654 Pyrroloquinoline-quinone synthase [pqqC]. 1 246 124.463 T 11-10-2018 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420 DB34_01380 82d82a3eeb15facdd54b75e90e3b4292 246 Gene3D G3DSA:1.20.910.10 2 234 3.2E-58 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 DB34_01380 82d82a3eeb15facdd54b75e90e3b4292 246 TIGRFAM TIGR02111 PQQ_syn_pqqC: coenzyme PQQ biosynthesis protein C 6 243 3.3E-115 T 11-10-2018 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420 DB34_01380 82d82a3eeb15facdd54b75e90e3b4292 246 Pfam PF03070 TENA/THI-4/PQQC family 13 223 2.8E-57 T 11-10-2018 IPR004305 Thiaminase-2/PQQC DB34_08850 5dfc908c0b3af6d0a2dfae9fa2ac1134 339 PIRSF PIRSF002849 1 339 3.3E-113 T 11-10-2018 DB34_08850 5dfc908c0b3af6d0a2dfae9fa2ac1134 339 Gene3D G3DSA:1.10.8.300 222 338 2.5E-27 T 11-10-2018 DB34_08850 5dfc908c0b3af6d0a2dfae9fa2ac1134 339 Gene3D G3DSA:3.40.50.300 40 208 1.9E-40 T 11-10-2018 DB34_08850 5dfc908c0b3af6d0a2dfae9fa2ac1134 339 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 59 192 1.7E-58 T 11-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 DB34_08850 5dfc908c0b3af6d0a2dfae9fa2ac1134 339 SMART SM00382 56 200 0.0078 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_08850 5dfc908c0b3af6d0a2dfae9fa2ac1134 339 SUPERFAMILY SSF52540 29 315 2.42E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_09715 c16b0a1e2185c4c9b190794612e34274 512 Gene3D G3DSA:3.40.50.620 5 335 2.8E-157 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DB34_09715 c16b0a1e2185c4c9b190794612e34274 512 SUPERFAMILY SSF47323 351 505 1.53E-37 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB34_09715 c16b0a1e2185c4c9b190794612e34274 512 SUPERFAMILY SSF52374 3 348 2.68E-113 T 11-10-2018 DB34_09715 c16b0a1e2185c4c9b190794612e34274 512 Pfam PF09334 tRNA synthetases class I (M) 5 363 2.6E-111 T 11-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB34_09715 c16b0a1e2185c4c9b190794612e34274 512 PRINTS PR01041 Methionyl-tRNA synthetase signature 7 20 1.2E-35 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DB34_09715 c16b0a1e2185c4c9b190794612e34274 512 PRINTS PR01041 Methionyl-tRNA synthetase signature 258 273 1.2E-35 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DB34_09715 c16b0a1e2185c4c9b190794612e34274 512 PRINTS PR01041 Methionyl-tRNA synthetase signature 226 237 1.2E-35 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DB34_09715 c16b0a1e2185c4c9b190794612e34274 512 PRINTS PR01041 Methionyl-tRNA synthetase signature 350 361 1.2E-35 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DB34_09715 c16b0a1e2185c4c9b190794612e34274 512 PRINTS PR01041 Methionyl-tRNA synthetase signature 87 98 1.2E-35 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DB34_09715 c16b0a1e2185c4c9b190794612e34274 512 PRINTS PR01041 Methionyl-tRNA synthetase signature 39 53 1.2E-35 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DB34_09715 c16b0a1e2185c4c9b190794612e34274 512 Hamap MF_01228 Methionine--tRNA ligase [metG]. 1 505 46.671 T 11-10-2018 IPR023457 Methionine-tRNA synthetase, type 2 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DB34_09715 c16b0a1e2185c4c9b190794612e34274 512 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 5 483 4.3E-156 T 11-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DB34_09715 c16b0a1e2185c4c9b190794612e34274 512 Gene3D G3DSA:2.170.220.10 116 228 2.8E-157 T 11-10-2018 DB34_09715 c16b0a1e2185c4c9b190794612e34274 512 Gene3D G3DSA:1.10.730.10 339 510 9.8E-49 T 11-10-2018 DB34_11970 2dedf3c0e6ccc91e212664521bbcccad 366 PRINTS PR00139 Asparaginase/glutaminase family signature 44 55 1.9E-22 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DB34_11970 2dedf3c0e6ccc91e212664521bbcccad 366 PRINTS PR00139 Asparaginase/glutaminase family signature 298 316 1.9E-22 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DB34_11970 2dedf3c0e6ccc91e212664521bbcccad 366 PRINTS PR00139 Asparaginase/glutaminase family signature 123 141 1.9E-22 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DB34_11970 2dedf3c0e6ccc91e212664521bbcccad 366 SMART SM00870 43 358 1.3E-137 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DB34_11970 2dedf3c0e6ccc91e212664521bbcccad 366 PIRSF PIRSF500176 40 365 1.2E-86 T 11-10-2018 DB34_11970 2dedf3c0e6ccc91e212664521bbcccad 366 SUPERFAMILY SSF53774 41 362 1.96E-99 T 11-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 DB34_11970 2dedf3c0e6ccc91e212664521bbcccad 366 Pfam PF00710 Asparaginase, N-terminal 43 231 6.9E-60 T 11-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 DB34_11970 2dedf3c0e6ccc91e212664521bbcccad 366 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 46 54 - T 11-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 DB34_11970 2dedf3c0e6ccc91e212664521bbcccad 366 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 124 134 - T 11-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 DB34_11970 2dedf3c0e6ccc91e212664521bbcccad 366 PIRSF PIRSF001220 38 365 1.7E-97 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DB34_11970 2dedf3c0e6ccc91e212664521bbcccad 366 Gene3D G3DSA:3.40.50.40 251 364 2.8E-39 T 11-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 DB34_11970 2dedf3c0e6ccc91e212664521bbcccad 366 Gene3D G3DSA:3.40.50.1170 39 250 1.2E-79 T 11-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 DB34_11970 2dedf3c0e6ccc91e212664521bbcccad 366 TIGRFAM TIGR00520 asnASE_II: L-asparaginase, type II 34 363 2.3E-117 T 11-10-2018 IPR004550 L-asparaginase, type II GO:0004067|GO:0006528 DB34_04050 651498ca612c305cd6cd8472d51e2fc1 424 SUPERFAMILY SSF50974 95 410 2.35E-60 T 11-10-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 DB34_04050 651498ca612c305cd6cd8472d51e2fc1 424 Gene3D G3DSA:2.130.10.10 261 421 2.2E-25 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 DB34_04050 651498ca612c305cd6cd8472d51e2fc1 424 Gene3D G3DSA:2.130.10.10 76 260 8.4E-26 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 DB34_04050 651498ca612c305cd6cd8472d51e2fc1 424 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 100 136 3.3E-11 T 11-10-2018 IPR011964 YVTN beta-propeller repeat DB34_09370 7bf33c25fdcdd7e49f0489a108352df2 350 Gene3D G3DSA:3.40.50.300 121 327 1.2E-71 T 11-10-2018 DB34_09370 7bf33c25fdcdd7e49f0489a108352df2 350 Pfam PF02562 PhoH-like protein 124 327 3.7E-91 T 11-10-2018 IPR003714 PhoH-like protein GO:0005524 DB34_09370 7bf33c25fdcdd7e49f0489a108352df2 350 SUPERFAMILY SSF52540 108 299 1.53E-38 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_02330 66e05a6b03ccc636fa4aeb145fe4629e 226 Gene3D G3DSA:3.40.30.10 20 213 1.2E-61 T 11-10-2018 DB34_02330 66e05a6b03ccc636fa4aeb145fe4629e 226 SUPERFAMILY SSF52833 25 221 1.44E-60 T 11-10-2018 IPR036249 Thioredoxin-like superfamily DB34_02330 66e05a6b03ccc636fa4aeb145fe4629e 226 PIRSF PIRSF000239 21 223 6.8E-70 T 11-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DB34_02330 66e05a6b03ccc636fa4aeb145fe4629e 226 Pfam PF00578 AhpC/TSA family 27 156 9.7E-34 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DB34_02330 66e05a6b03ccc636fa4aeb145fe4629e 226 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 177 209 5.0E-6 T 11-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DB34_12445 d76127f15c632a9acff41cea8d3dca9b 496 Pfam PF01458 Uncharacterized protein family (UPF0051) 234 467 1.2E-67 T 11-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 DB34_12445 d76127f15c632a9acff41cea8d3dca9b 496 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 18 487 8.0E-191 T 11-10-2018 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 DB34_12445 d76127f15c632a9acff41cea8d3dca9b 496 SUPERFAMILY SSF101960 39 493 1.83E-137 T 11-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily DB34_08730 c9d06a911af2785095e7f478df6e8073 162 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 152 20.301 T 11-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 DB34_08730 c9d06a911af2785095e7f478df6e8073 162 ProSitePatterns PS00475 Ribosomal protein L15 signature. 116 146 - T 11-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_08730 c9d06a911af2785095e7f478df6e8073 162 Gene3D G3DSA:3.100.10.10 65 153 1.1E-18 T 11-10-2018 DB34_08730 c9d06a911af2785095e7f478df6e8073 162 SUPERFAMILY SSF52080 4 151 2.35E-40 T 11-10-2018 IPR036227 Ribosomal L18e/L15P superfamily DB34_08730 c9d06a911af2785095e7f478df6e8073 162 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 150 5.3E-47 T 11-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_08730 c9d06a911af2785095e7f478df6e8073 162 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 27 150 2.0E-33 T 11-10-2018 IPR021131 Ribosomal protein L18e/L15P DB34_08835 c3a47c5319e8eae181eff0cc3bdcdeaa 714 Gene3D G3DSA:3.40.50.880 339 533 9.6E-32 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like DB34_08835 c3a47c5319e8eae181eff0cc3bdcdeaa 714 SUPERFAMILY SSF52317 270 534 1.1E-48 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like DB34_05945 47df2d1c7bf21833f5bf9ba78c4074a9 620 Gene3D G3DSA:1.25.40.10 281 582 4.0E-44 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB34_05945 47df2d1c7bf21833f5bf9ba78c4074a9 620 Pfam PF13414 TPR repeat 524 561 6.1E-10 T 11-10-2018 DB34_05945 47df2d1c7bf21833f5bf9ba78c4074a9 620 Pfam PF13432 Tetratricopeptide repeat 450 513 0.0018 T 11-10-2018 DB34_05945 47df2d1c7bf21833f5bf9ba78c4074a9 620 Pfam PF09976 Tetratricopeptide repeat-like domain 338 440 1.1E-6 T 11-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 DB34_05945 47df2d1c7bf21833f5bf9ba78c4074a9 620 SUPERFAMILY SSF48452 311 436 2.73E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB34_05945 47df2d1c7bf21833f5bf9ba78c4074a9 620 SMART SM00028 406 439 0.31 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB34_05945 47df2d1c7bf21833f5bf9ba78c4074a9 620 SMART SM00028 513 546 27.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB34_05945 47df2d1c7bf21833f5bf9ba78c4074a9 620 SMART SM00028 478 512 350.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB34_05945 47df2d1c7bf21833f5bf9ba78c4074a9 620 SMART SM00028 444 477 0.23 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB34_05945 47df2d1c7bf21833f5bf9ba78c4074a9 620 SMART SM00028 547 580 3.8 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB34_05945 47df2d1c7bf21833f5bf9ba78c4074a9 620 SUPERFAMILY SSF48452 126 297 1.2E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB34_05945 47df2d1c7bf21833f5bf9ba78c4074a9 620 SUPERFAMILY SSF48452 403 578 3.2E-33 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB34_05785 abc3edb6f8d1081936db439c5ba6a76d 356 Pfam PF01212 Beta-eliminating lyase 12 299 4.2E-60 T 11-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 DB34_05785 abc3edb6f8d1081936db439c5ba6a76d 356 Gene3D G3DSA:3.40.640.10 22 261 3.7E-116 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB34_05785 abc3edb6f8d1081936db439c5ba6a76d 356 SUPERFAMILY SSF53383 12 351 6.33E-88 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB34_05785 abc3edb6f8d1081936db439c5ba6a76d 356 Gene3D G3DSA:3.90.1150.10 15 341 3.7E-116 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB34_00850 9929114d0270002feafd131211fa77b3 997 Pfam PF10150 Ribonuclease E/G family 264 535 1.6E-94 T 11-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 DB34_00850 9929114d0270002feafd131211fa77b3 997 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 67 569 7.0E-155 T 11-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 DB34_00850 9929114d0270002feafd131211fa77b3 997 Hamap MF_00970 Ribonuclease E [rne]. 55 992 29.957 T 11-10-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 DB34_00850 9929114d0270002feafd131211fa77b3 997 Gene3D G3DSA:3.40.1260.20 545 645 1.4E-30 T 11-10-2018 DB34_00850 9929114d0270002feafd131211fa77b3 997 SUPERFAMILY SSF50249 93 268 1.09E-14 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB34_00850 9929114d0270002feafd131211fa77b3 997 SMART SM00316 91 262 0.0024 T 11-10-2018 IPR022967 RNA-binding domain, S1 DB34_12440 c232c284bd53502f12439d3976a7fd9c 256 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB34_12440 c232c284bd53502f12439d3976a7fd9c 256 SMART SM00382 33 230 9.0E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_12440 c232c284bd53502f12439d3976a7fd9c 256 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 5 250 5.4E-104 T 11-10-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524 DB34_12440 c232c284bd53502f12439d3976a7fd9c 256 SUPERFAMILY SSF52540 5 238 7.27E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_12440 c232c284bd53502f12439d3976a7fd9c 256 Gene3D G3DSA:3.40.50.300 4 254 1.6E-57 T 11-10-2018 DB34_12440 c232c284bd53502f12439d3976a7fd9c 256 Pfam PF00005 ABC transporter 24 179 5.7E-20 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB34_02655 05f9344bd657fbd1c409f4219abc9055 495 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 25 479 46.584 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 DB34_02655 05f9344bd657fbd1c409f4219abc9055 495 PIRSF PIRSF000485 22 490 9.1E-167 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 DB34_02655 05f9344bd657fbd1c409f4219abc9055 495 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 26 480 9.3E-153 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 DB34_02655 05f9344bd657fbd1c409f4219abc9055 495 Gene3D G3DSA:3.60.20.10 26 481 5.8E-153 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DB34_02655 05f9344bd657fbd1c409f4219abc9055 495 SUPERFAMILY SSF56235 26 275 8.58E-65 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DB34_02655 05f9344bd657fbd1c409f4219abc9055 495 Pfam PF00156 Phosphoribosyl transferase domain 295 403 3.4E-9 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 DB34_02655 05f9344bd657fbd1c409f4219abc9055 495 Pfam PF13537 Glutamine amidotransferase domain 108 228 4.8E-17 T 11-10-2018 IPR017932 Glutamine amidotransferase type 2 domain DB34_02655 05f9344bd657fbd1c409f4219abc9055 495 SUPERFAMILY SSF53271 269 486 5.11E-73 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like DB34_02655 05f9344bd657fbd1c409f4219abc9055 495 Gene3D G3DSA:3.40.50.2020 293 457 5.8E-153 T 11-10-2018 DB34_03325 576115fdc977df08021810110850fb33 249 SUPERFAMILY SSF52402 1 242 4.33E-87 T 11-10-2018 DB34_03325 576115fdc977df08021810110850fb33 249 Pfam PF01012 Electron transfer flavoprotein domain 26 206 1.5E-47 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 DB34_03325 576115fdc977df08021810110850fb33 249 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 11-10-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 DB34_03325 576115fdc977df08021810110850fb33 249 Gene3D G3DSA:3.40.50.620 1 247 7.7E-91 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DB34_03325 576115fdc977df08021810110850fb33 249 PIRSF PIRSF000090 1 249 7.3E-88 T 11-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 DB34_03325 576115fdc977df08021810110850fb33 249 SMART SM00893 23 211 6.3E-67 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 DB34_08845 607210be4695d13487fb36103d353bf0 327 Pfam PF01882 Protein of unknown function DUF58 80 165 4.4E-16 T 11-10-2018 IPR002881 Domain of unknown function DUF58 DB34_08845 607210be4695d13487fb36103d353bf0 327 SUPERFAMILY SSF53300 118 262 1.41E-5 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily DB34_09770 0ec094eff6a18e1e49b758c5ec2b263e 216 SUPERFAMILY SSF102114 46 146 2.94E-7 T 11-10-2018 DB34_09770 0ec094eff6a18e1e49b758c5ec2b263e 216 TIGRFAM TIGR04508 queE_Cx14CxxC: 7-carboxy-7-deazaguanine synthase 3 216 1.2E-107 T 11-10-2018 IPR030977 7-carboxy-7-deazaguanine synthase, Cx14CxxC-type GO:0008616|GO:0046872 KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 DB34_09770 0ec094eff6a18e1e49b758c5ec2b263e 216 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 3 216 31.026 T 11-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 DB34_09770 0ec094eff6a18e1e49b758c5ec2b263e 216 Gene3D G3DSA:3.20.20.70 2 216 2.1E-66 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB34_08985 b5ca1fec57285e09dd52db763513060b 384 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 17 365 3.3E-71 T 11-10-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 DB34_08985 b5ca1fec57285e09dd52db763513060b 384 Pfam PF03739 Predicted permease YjgP/YjgQ family 19 360 8.3E-62 T 11-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 DB34_06055 80b0705cad7dbb735d4c211b09a93e73 303 SUPERFAMILY SSF53807 30 275 9.42E-30 T 11-10-2018 DB34_06055 80b0705cad7dbb735d4c211b09a93e73 303 Pfam PF01497 Periplasmic binding protein 32 241 3.1E-18 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain DB34_06055 80b0705cad7dbb735d4c211b09a93e73 303 Gene3D G3DSA:3.40.50.1980 25 148 4.8E-16 T 11-10-2018 DB34_06055 80b0705cad7dbb735d4c211b09a93e73 303 Gene3D G3DSA:3.40.50.1980 151 277 3.2E-5 T 11-10-2018 DB34_01360 655ec124cbf484e10467e3c9c95b8c79 381 Gene3D G3DSA:3.90.550.10 41 290 3.7E-21 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB34_01360 655ec124cbf484e10467e3c9c95b8c79 381 SUPERFAMILY SSF53448 54 342 5.63E-27 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB34_01360 655ec124cbf484e10467e3c9c95b8c79 381 Pfam PF13641 Glycosyltransferase like family 2 53 276 1.3E-10 T 11-10-2018 DB34_02350 fa0ff01eda4e77d744bae590efc1bd9f 93 Gene3D G3DSA:3.40.30.10 1 89 3.4E-28 T 11-10-2018 DB34_02350 fa0ff01eda4e77d744bae590efc1bd9f 93 SUPERFAMILY SSF52833 2 83 2.31E-20 T 11-10-2018 IPR036249 Thioredoxin-like superfamily DB34_12760 50c25b51d2ab727b621806e845acff19 275 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 46 263 1.0E-32 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 DB34_12760 50c25b51d2ab727b621806e845acff19 275 Gene3D G3DSA:2.40.240.20 31 101 9.9E-15 T 11-10-2018 DB34_12760 50c25b51d2ab727b621806e845acff19 275 Gene3D G3DSA:3.40.1280.10 103 267 4.2E-42 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DB34_12760 50c25b51d2ab727b621806e845acff19 275 SUPERFAMILY SSF75217 105 263 2.51E-36 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases DB34_12760 50c25b51d2ab727b621806e845acff19 275 PIRSF PIRSF015601 29 269 2.1E-54 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 DB34_12760 50c25b51d2ab727b621806e845acff19 275 SUPERFAMILY SSF88697 41 100 1.91E-11 T 11-10-2018 IPR015947 PUA-like superfamily DB34_12760 50c25b51d2ab727b621806e845acff19 275 Pfam PF04452 RNA methyltransferase 49 263 1.5E-50 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 DB34_00120 179058cf10ab9224819c9dab29ae717b 320 Gene3D G3DSA:2.40.50.100 46 115 1.1E-12 T 11-10-2018 DB34_00120 179058cf10ab9224819c9dab29ae717b 320 Pfam PF13533 Biotin-lipoyl like 47 94 2.9E-14 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain DB34_00120 179058cf10ab9224819c9dab29ae717b 320 Gene3D G3DSA:2.40.30.170 170 296 1.3E-22 T 11-10-2018 DB34_00120 179058cf10ab9224819c9dab29ae717b 320 SUPERFAMILY SSF111369 45 182 3.01E-20 T 11-10-2018 DB34_00120 179058cf10ab9224819c9dab29ae717b 320 Pfam PF13437 HlyD family secretion protein 157 236 1.9E-6 T 11-10-2018 DB34_01200 78855fce1b2710d93e1b856a24e74c47 595 SUPERFAMILY SSF52467 156 356 2.45E-38 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily DB34_01200 78855fce1b2710d93e1b856a24e74c47 595 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 170 2.4E-39 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 DB34_01200 78855fce1b2710d93e1b856a24e74c47 595 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 199 328 2.4E-23 T 11-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 DB34_01200 78855fce1b2710d93e1b856a24e74c47 595 SUPERFAMILY SSF52518 1 174 3.3E-42 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold DB34_01200 78855fce1b2710d93e1b856a24e74c47 595 Gene3D G3DSA:3.40.50.970 355 586 1.3E-50 T 11-10-2018 DB34_01200 78855fce1b2710d93e1b856a24e74c47 595 Gene3D G3DSA:3.40.50.970 1 178 1.5E-48 T 11-10-2018 DB34_01200 78855fce1b2710d93e1b856a24e74c47 595 Gene3D G3DSA:3.40.50.1220 187 342 1.2E-38 T 11-10-2018 DB34_01200 78855fce1b2710d93e1b856a24e74c47 595 SUPERFAMILY SSF52518 358 566 2.14E-47 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold DB34_01200 78855fce1b2710d93e1b856a24e74c47 595 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 388 542 4.4E-23 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 DB34_08445 a30b06f6aa2d3746cf84a6d22a00bc60 661 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 54 644 8.7E-184 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 DB34_08445 a30b06f6aa2d3746cf84a6d22a00bc60 661 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 641 2.5E-109 T 11-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal DB34_08445 a30b06f6aa2d3746cf84a6d22a00bc60 661 Pfam PF01578 Cytochrome C assembly protein 90 297 2.2E-46 T 11-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 DB34_08445 a30b06f6aa2d3746cf84a6d22a00bc60 661 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 81 107 2.8E-86 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 DB34_08445 a30b06f6aa2d3746cf84a6d22a00bc60 661 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 2.8E-86 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 DB34_08445 a30b06f6aa2d3746cf84a6d22a00bc60 661 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 133 150 2.8E-86 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 DB34_08445 a30b06f6aa2d3746cf84a6d22a00bc60 661 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 2.8E-86 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 DB34_08445 a30b06f6aa2d3746cf84a6d22a00bc60 661 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 2.8E-86 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 DB34_08445 a30b06f6aa2d3746cf84a6d22a00bc60 661 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 2.8E-86 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 DB34_08445 a30b06f6aa2d3746cf84a6d22a00bc60 661 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 2.8E-86 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 DB34_08445 a30b06f6aa2d3746cf84a6d22a00bc60 661 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 2.8E-86 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 DB34_08445 a30b06f6aa2d3746cf84a6d22a00bc60 661 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 114 137 1.1E-56 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 DB34_08445 a30b06f6aa2d3746cf84a6d22a00bc60 661 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 1.1E-56 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 DB34_08445 a30b06f6aa2d3746cf84a6d22a00bc60 661 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 1.1E-56 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 DB34_08445 a30b06f6aa2d3746cf84a6d22a00bc60 661 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 1.1E-56 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 DB34_08445 a30b06f6aa2d3746cf84a6d22a00bc60 661 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 1.1E-56 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 DB34_08445 a30b06f6aa2d3746cf84a6d22a00bc60 661 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 634 647 1.1E-56 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 DB34_08445 a30b06f6aa2d3746cf84a6d22a00bc60 661 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 5 29 1.1E-56 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 DB34_12660 3539165b7d046843153bba91146d60b3 240 Gene3D G3DSA:3.40.50.2300 2 138 3.2E-37 T 11-10-2018 DB34_12660 3539165b7d046843153bba91146d60b3 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 164 236 1.9E-19 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DB34_12660 3539165b7d046843153bba91146d60b3 240 Gene3D G3DSA:1.10.10.10 139 239 1.2E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB34_12660 3539165b7d046843153bba91146d60b3 240 SMART SM00448 14 125 1.4E-41 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB34_12660 3539165b7d046843153bba91146d60b3 240 Pfam PF00072 Response regulator receiver domain 16 125 6.0E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB34_12660 3539165b7d046843153bba91146d60b3 240 SUPERFAMILY SSF52172 14 137 1.99E-40 T 11-10-2018 IPR011006 CheY-like superfamily DB34_12660 3539165b7d046843153bba91146d60b3 240 SUPERFAMILY SSF46894 143 236 2.49E-20 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DB34_12660 3539165b7d046843153bba91146d60b3 240 SMART SM00862 162 236 1.5E-20 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DB34_12215 22dfb7f11ae4b46b850749858ada0fe8 261 Pfam PF04116 Fatty acid hydroxylase superfamily 65 207 4.5E-20 T 11-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 DB34_02565 402ed33a8d89053b48619fd6ff0e31f8 472 Gene3D G3DSA:3.20.20.70 14 368 3.0E-22 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB34_02565 402ed33a8d89053b48619fd6ff0e31f8 472 SUPERFAMILY SSF51412 25 311 8.61E-7 T 11-10-2018 DB34_12195 697515434dbe1829b5f9b1b366cb2d36 326 Gene3D G3DSA:3.40.50.10330 1 124 1.4E-10 T 11-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 DB34_12195 697515434dbe1829b5f9b1b366cb2d36 326 SUPERFAMILY SSF111331 3 314 3.05E-26 T 11-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily DB34_12195 697515434dbe1829b5f9b1b366cb2d36 326 Pfam PF00781 Diacylglycerol kinase catalytic domain 7 116 1.2E-10 T 11-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 DB34_05060 136c46d8712ceddf0910cc217580ad34 171 Pfam PF02600 Disulfide bond formation protein DsbB 8 157 1.2E-23 T 11-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 DB34_05060 136c46d8712ceddf0910cc217580ad34 171 SUPERFAMILY SSF158442 12 157 4.84E-21 T 11-10-2018 IPR023380 DsbB-like superfamily DB34_05060 136c46d8712ceddf0910cc217580ad34 171 Gene3D G3DSA:1.20.1550.10 1 171 9.2E-15 T 11-10-2018 IPR023380 DsbB-like superfamily DB34_02970 2c8971c5333c9452e53ddd99fd479ce6 314 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 46 301 1.2E-25 T 11-10-2018 IPR017039 Virulence factor BrkB DB34_02970 2c8971c5333c9452e53ddd99fd479ce6 314 PIRSF PIRSF035875 17 313 3.6E-56 T 11-10-2018 IPR017039 Virulence factor BrkB DB34_02970 2c8971c5333c9452e53ddd99fd479ce6 314 Pfam PF03631 Virulence factor BrkB 47 302 5.7E-54 T 11-10-2018 IPR017039 Virulence factor BrkB DB34_05310 8eb5223e17e0c22e39f1200695179252 198 PRINTS PR00773 GrpE protein signature 61 77 4.4E-16 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 DB34_05310 8eb5223e17e0c22e39f1200695179252 198 PRINTS PR00773 GrpE protein signature 148 163 4.4E-16 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 DB34_05310 8eb5223e17e0c22e39f1200695179252 198 PRINTS PR00773 GrpE protein signature 175 194 4.4E-16 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 DB34_05310 8eb5223e17e0c22e39f1200695179252 198 PRINTS PR00773 GrpE protein signature 89 104 4.4E-16 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 DB34_05310 8eb5223e17e0c22e39f1200695179252 198 SUPERFAMILY SSF51064 142 196 1.02E-13 T 11-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 DB34_05310 8eb5223e17e0c22e39f1200695179252 198 Pfam PF01025 GrpE 31 196 2.5E-44 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 DB34_05310 8eb5223e17e0c22e39f1200695179252 198 Gene3D G3DSA:3.90.20.20 21 139 7.1E-21 T 11-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 DB34_05310 8eb5223e17e0c22e39f1200695179252 198 Gene3D G3DSA:2.30.22.10 140 196 1.4E-18 T 11-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 DB34_05310 8eb5223e17e0c22e39f1200695179252 198 Hamap MF_01151 Protein GrpE [grpE]. 3 196 16.479 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 DB34_05310 8eb5223e17e0c22e39f1200695179252 198 SUPERFAMILY SSF58014 43 140 2.48E-21 T 11-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 DB34_01890 21793b6a8e72d29a93052aa0cd4b482c 1154 Pfam PF02514 CobN/Magnesium Chelatase 162 734 6.5E-143 T 11-10-2018 IPR003672 CobN/magnesium chelatase GO:0009058 DB34_01890 21793b6a8e72d29a93052aa0cd4b482c 1154 Pfam PF02514 CobN/Magnesium Chelatase 736 1141 5.4E-130 T 11-10-2018 IPR003672 CobN/magnesium chelatase GO:0009058 DB34_00970 a63e15451ae655b47cd22081264f173c 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 251 2.6E-74 T 11-10-2018 DB34_00970 a63e15451ae655b47cd22081264f173c 253 Gene3D G3DSA:3.40.50.720 1 253 1.5E-86 T 11-10-2018 DB34_00970 a63e15451ae655b47cd22081264f173c 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DB34_00970 a63e15451ae655b47cd22081264f173c 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 2.0E-42 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_00970 a63e15451ae655b47cd22081264f173c 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 2.0E-42 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_00970 a63e15451ae655b47cd22081264f173c 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 2.0E-42 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_00970 a63e15451ae655b47cd22081264f173c 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 2.0E-42 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_00970 a63e15451ae655b47cd22081264f173c 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.0E-42 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_00970 a63e15451ae655b47cd22081264f173c 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 2.0E-42 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_00970 a63e15451ae655b47cd22081264f173c 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 8.0E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_00970 a63e15451ae655b47cd22081264f173c 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 8.0E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_00970 a63e15451ae655b47cd22081264f173c 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 8.0E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_00970 a63e15451ae655b47cd22081264f173c 253 SUPERFAMILY SSF51735 6 252 2.5E-85 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily DB34_08110 53a5ad3cf09a445636bf23774f157c01 242 SUPERFAMILY SSF69618 6 237 1.57E-35 T 11-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DB34_08110 53a5ad3cf09a445636bf23774f157c01 242 Gene3D G3DSA:3.40.50.10090 1 120 2.5E-18 T 11-10-2018 DB34_08110 53a5ad3cf09a445636bf23774f157c01 242 Pfam PF02602 Uroporphyrinogen-III synthase HemD 20 232 7.6E-30 T 11-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DB34_08110 53a5ad3cf09a445636bf23774f157c01 242 Gene3D G3DSA:3.40.50.10090 121 239 5.9E-16 T 11-10-2018 DB34_11055 4f9b36bbaade479353a9743d4b14abe6 315 SUPERFAMILY SSF53659 17 308 3.25E-61 T 11-10-2018 DB34_11055 4f9b36bbaade479353a9743d4b14abe6 315 Gene3D G3DSA:3.40.718.10 13 308 5.4E-91 T 11-10-2018 DB34_11055 4f9b36bbaade479353a9743d4b14abe6 315 Pfam PF01515 Phosphate acetyl/butaryl transferase 88 303 7.9E-39 T 11-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 DB34_11055 4f9b36bbaade479353a9743d4b14abe6 315 PIRSF PIRSF000428 9 310 8.4E-75 T 11-10-2018 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 DB34_00225 549f36b256ac6eb907d1956d24d14194 318 SUPERFAMILY SSF53474 38 316 2.38E-66 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold DB34_00225 549f36b256ac6eb907d1956d24d14194 318 Pfam PF07859 alpha/beta hydrolase fold 83 291 1.5E-60 T 11-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 DB34_00225 549f36b256ac6eb907d1956d24d14194 318 Gene3D G3DSA:3.40.50.1820 3 317 3.4E-84 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold DB34_04085 0e3d51f042a7cb6df7a8b46714dd8a39 484 Pfam PF13742 OB-fold nucleic acid binding domain 17 110 1.5E-26 T 11-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 DB34_04085 0e3d51f042a7cb6df7a8b46714dd8a39 484 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 18 468 1.6E-125 T 11-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 DB34_04085 0e3d51f042a7cb6df7a8b46714dd8a39 484 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 14 471 26.492 T 11-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 DB34_04085 0e3d51f042a7cb6df7a8b46714dd8a39 484 Pfam PF02601 Exonuclease VII, large subunit 133 465 2.0E-89 T 11-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 DB34_06650 bb7e1c633a9ac4c51e6526d62465e1ae 176 SUPERFAMILY SSF46626 20 140 3.25E-18 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DB34_06650 bb7e1c633a9ac4c51e6526d62465e1ae 176 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 57 130 3.4E-8 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB34_06650 bb7e1c633a9ac4c51e6526d62465e1ae 176 Gene3D G3DSA:1.10.760.10 38 161 2.0E-14 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DB34_00975 f7d8385add5cacee77f54aa431771b3b 483 SUPERFAMILY SSF53720 9 473 3.93E-150 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DB34_00975 f7d8385add5cacee77f54aa431771b3b 483 Gene3D G3DSA:3.40.309.10 251 442 1.3E-161 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DB34_00975 f7d8385add5cacee77f54aa431771b3b 483 Pfam PF00171 Aldehyde dehydrogenase family 17 473 2.0E-150 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DB34_00975 f7d8385add5cacee77f54aa431771b3b 483 Gene3D G3DSA:3.40.605.10 28 469 1.3E-161 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DB34_06975 76de1506d8df5183e8cb36ac9893d4f4 144 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 6 126 17.188 T 11-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 DB34_06975 76de1506d8df5183e8cb36ac9893d4f4 144 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 7 121 1.4E-21 T 11-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 DB34_06975 76de1506d8df5183e8cb36ac9893d4f4 144 TIGRFAM TIGR00494 crcB: protein CrcB 7 125 5.3E-25 T 11-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 DB34_07925 e9abb231210a293446ab1f92f9863290 313 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 56 63 - T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DB34_07925 e9abb231210a293446ab1f92f9863290 313 PRINTS PR00101 Aspartate carbamoyltransferase signature 223 232 1.2E-31 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DB34_07925 e9abb231210a293446ab1f92f9863290 313 PRINTS PR00101 Aspartate carbamoyltransferase signature 264 269 1.2E-31 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DB34_07925 e9abb231210a293446ab1f92f9863290 313 PRINTS PR00101 Aspartate carbamoyltransferase signature 139 156 1.2E-31 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DB34_07925 e9abb231210a293446ab1f92f9863290 313 PRINTS PR00101 Aspartate carbamoyltransferase signature 46 68 1.2E-31 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DB34_07925 e9abb231210a293446ab1f92f9863290 313 PRINTS PR00101 Aspartate carbamoyltransferase signature 84 93 1.2E-31 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DB34_07925 e9abb231210a293446ab1f92f9863290 313 PRINTS PR00101 Aspartate carbamoyltransferase signature 288 302 1.2E-31 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DB34_07925 e9abb231210a293446ab1f92f9863290 313 Gene3D G3DSA:3.40.50.1370 140 294 1.0E-93 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 DB34_07925 e9abb231210a293446ab1f92f9863290 313 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 10 306 5.9E-92 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DB34_07925 e9abb231210a293446ab1f92f9863290 313 SUPERFAMILY SSF53671 8 307 1.96E-97 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 DB34_07925 e9abb231210a293446ab1f92f9863290 313 Gene3D G3DSA:3.40.50.1370 11 303 1.0E-93 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 DB34_07925 e9abb231210a293446ab1f92f9863290 313 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 160 304 2.0E-25 T 11-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 DB34_07925 e9abb231210a293446ab1f92f9863290 313 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 9 309 40.261 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DB34_07925 e9abb231210a293446ab1f92f9863290 313 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 10 152 3.0E-40 T 11-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 DB34_07925 e9abb231210a293446ab1f92f9863290 313 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 56 75 3.5E-19 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DB34_07925 e9abb231210a293446ab1f92f9863290 313 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 140 151 3.5E-19 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DB34_07925 e9abb231210a293446ab1f92f9863290 313 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 260 269 3.5E-19 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DB34_07925 e9abb231210a293446ab1f92f9863290 313 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 272 295 3.5E-19 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DB34_07530 090e886bedaaf18bdc4a2ea2215ccc40 245 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 113 221 1.5E-5 T 11-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related DB34_13305 19cc69090b5dc19fd1f77ab80ffa8751 218 Pfam PF13643 Domain of unknown function (DUF4145) 132 188 5.4E-8 T 11-10-2018 IPR025285 Domain of unknown function DUF4145 DB34_03515 d5122412d07a3eb4916e31d17039b29d 387 PIRSF PIRSF005572 2 386 3.2E-108 T 11-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 DB34_03515 d5122412d07a3eb4916e31d17039b29d 387 Gene3D G3DSA:3.40.640.10 16 263 2.2E-124 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB34_03515 d5122412d07a3eb4916e31d17039b29d 387 Pfam PF00266 Aminotransferase class-V 5 368 2.6E-66 T 11-10-2018 IPR000192 Aminotransferase class V domain DB34_03515 d5122412d07a3eb4916e31d17039b29d 387 Gene3D G3DSA:3.90.1150.10 5 379 2.2E-124 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB34_03515 d5122412d07a3eb4916e31d17039b29d 387 SUPERFAMILY SSF53383 5 379 8.42E-92 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB34_10440 942dc5afd48bdd212a73ad303b706ed5 110 Gene3D G3DSA:2.60.40.180 1 110 2.6E-33 T 11-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 DB34_10440 942dc5afd48bdd212a73ad303b706ed5 110 ProSitePatterns PS00768 Transthyretin signature 1. 7 22 - T 11-10-2018 IPR023418 Transthyretin, thyroxine binding site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 DB34_10440 942dc5afd48bdd212a73ad303b706ed5 110 SUPERFAMILY SSF49472 1 110 7.06E-33 T 11-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 DB34_10440 942dc5afd48bdd212a73ad303b706ed5 110 Pfam PF00576 HIUase/Transthyretin family 4 109 5.8E-30 T 11-10-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase domain Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 DB34_10440 942dc5afd48bdd212a73ad303b706ed5 110 PRINTS PR00189 Transthyretin signature 3 23 4.8E-5 T 11-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 DB34_10440 942dc5afd48bdd212a73ad303b706ed5 110 PRINTS PR00189 Transthyretin signature 88 110 4.8E-5 T 11-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 DB34_10440 942dc5afd48bdd212a73ad303b706ed5 110 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 2 110 1.7E-31 T 11-10-2018 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 DB34_08945 034c705e66a8d94d4bf833e8b579191b 153 SUPERFAMILY SSF54995 1 103 3.79E-31 T 11-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_08945 034c705e66a8d94d4bf833e8b579191b 153 TIGRFAM TIGR00166 S6: ribosomal protein bS6 2 94 7.9E-22 T 11-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_08945 034c705e66a8d94d4bf833e8b579191b 153 Gene3D G3DSA:3.30.70.60 1 100 2.1E-28 T 11-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 DB34_08945 034c705e66a8d94d4bf833e8b579191b 153 Pfam PF01250 Ribosomal protein S6 4 92 7.5E-27 T 11-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_08945 034c705e66a8d94d4bf833e8b579191b 153 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 95 20.016 T 11-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 DB34_07410 5853ca830a12c1ec30b798430c1f7a59 361 SUPERFAMILY SSF51161 56 340 4.28E-73 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily DB34_07410 5853ca830a12c1ec30b798430c1f7a59 361 Gene3D G3DSA:3.40.1390.10 19 122 5.1E-18 T 11-10-2018 DB34_07410 5853ca830a12c1ec30b798430c1f7a59 361 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 50 114 2.3E-20 T 11-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 DB34_07410 5853ca830a12c1ec30b798430c1f7a59 361 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 246 281 4.1E-5 T 11-10-2018 IPR001451 Hexapeptide repeat DB34_07410 5853ca830a12c1ec30b798430c1f7a59 361 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 153 186 8.8E-8 T 11-10-2018 IPR001451 Hexapeptide repeat DB34_07410 5853ca830a12c1ec30b798430c1f7a59 361 Gene3D G3DSA:2.160.10.10 125 331 3.2E-56 T 11-10-2018 DB34_07410 5853ca830a12c1ec30b798430c1f7a59 361 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 49 349 6.6E-101 T 11-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 DB34_07410 5853ca830a12c1ec30b798430c1f7a59 361 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 27 349 33.569 T 11-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 DB34_07655 591c29bd14cf0a5faee075090e6b5f3d 227 Pfam PF06912 Protein of unknown function (DUF1275) 16 205 2.2E-20 T 11-10-2018 IPR010699 Protein of unknown function DUF1275 DB34_01030 68b193f35db2746a924470d3ff924f5e 430 Gene3D G3DSA:3.50.50.100 2 405 1.1E-96 T 11-10-2018 DB34_01030 68b193f35db2746a924470d3ff924f5e 430 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 168 193 2.7E-5 T 11-10-2018 DB34_01030 68b193f35db2746a924470d3ff924f5e 430 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 2.7E-5 T 11-10-2018 DB34_01030 68b193f35db2746a924470d3ff924f5e 430 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 2.7E-5 T 11-10-2018 DB34_01030 68b193f35db2746a924470d3ff924f5e 430 SUPERFAMILY SSF51905 2 340 8.48E-29 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_01030 68b193f35db2746a924470d3ff924f5e 430 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 2.0E-12 T 11-10-2018 DB34_01030 68b193f35db2746a924470d3ff924f5e 430 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 168 186 2.0E-12 T 11-10-2018 DB34_01030 68b193f35db2746a924470d3ff924f5e 430 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 2.0E-12 T 11-10-2018 DB34_01030 68b193f35db2746a924470d3ff924f5e 430 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 114 132 2.0E-12 T 11-10-2018 DB34_01030 68b193f35db2746a924470d3ff924f5e 430 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 333 1.7E-50 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DB34_09620 189dde62cf27b35283884f0f41ac2dba 361 SUPERFAMILY SSF51412 33 347 8.7E-49 T 11-10-2018 DB34_09620 189dde62cf27b35283884f0f41ac2dba 361 Gene3D G3DSA:3.20.20.70 31 360 3.2E-83 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB34_09620 189dde62cf27b35283884f0f41ac2dba 361 Pfam PF03060 Nitronate monooxygenase 108 343 4.0E-30 T 11-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 DB34_09620 189dde62cf27b35283884f0f41ac2dba 361 Pfam PF03060 Nitronate monooxygenase 33 103 6.2E-18 T 11-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 DB34_01935 9307258128e4f1c672a98a05db16ab62 268 SUPERFAMILY SSF52540 5 217 6.27E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_01935 9307258128e4f1c672a98a05db16ab62 268 Pfam PF00005 ABC transporter 21 165 5.4E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB34_01935 9307258128e4f1c672a98a05db16ab62 268 SMART SM00382 30 222 1.0E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_01935 9307258128e4f1c672a98a05db16ab62 268 Gene3D G3DSA:3.40.50.300 2 250 2.1E-60 T 11-10-2018 DB34_01935 9307258128e4f1c672a98a05db16ab62 268 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB34_13025 c38e9701c546bf5ca8617d0955d91394 185 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 89 99 - T 11-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 DB34_13025 c38e9701c546bf5ca8617d0955d91394 185 SUPERFAMILY SSF52799 13 150 7.07E-12 T 11-10-2018 IPR029021 Protein-tyrosine phosphatase-like DB34_13025 c38e9701c546bf5ca8617d0955d91394 185 Gene3D G3DSA:3.90.190.10 3 138 7.1E-12 T 11-10-2018 IPR029021 Protein-tyrosine phosphatase-like DB34_07440 2c5a9707425466c62ff3a4da2fcdaf2c 44 Pfam PF00468 Ribosomal protein L34 1 44 7.2E-23 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_07440 2c5a9707425466c62ff3a4da2fcdaf2c 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 15.625 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_07440 2c5a9707425466c62ff3a4da2fcdaf2c 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 42 3.0E-12 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_07440 2c5a9707425466c62ff3a4da2fcdaf2c 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 1.5E-23 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_07440 2c5a9707425466c62ff3a4da2fcdaf2c 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 11-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_07230 9d5daa63077738cc99d6a68b569905b7 418 Gene3D G3DSA:3.50.50.60 1 84 2.0E-13 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_07230 9d5daa63077738cc99d6a68b569905b7 418 SUPERFAMILY SSF54373 271 360 5.49E-14 T 11-10-2018 DB34_07230 9d5daa63077738cc99d6a68b569905b7 418 Gene3D G3DSA:3.50.50.60 107 406 2.3E-50 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_07230 9d5daa63077738cc99d6a68b569905b7 418 Pfam PF01266 FAD dependent oxidoreductase 3 399 9.1E-71 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DB34_07230 9d5daa63077738cc99d6a68b569905b7 418 Gene3D G3DSA:3.30.9.10 135 362 2.3E-50 T 11-10-2018 DB34_07230 9d5daa63077738cc99d6a68b569905b7 418 SUPERFAMILY SSF51905 2 417 4.14E-53 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_00795 9031842b11393521725e46b486b2e368 324 Gene3D G3DSA:3.90.1200.10 107 324 5.0E-76 T 11-10-2018 DB34_00795 9031842b11393521725e46b486b2e368 324 Hamap MF_00301 Homoserine kinase [thrB]. 1 324 148.823 T 11-10-2018 IPR005280 Homoserine kinase, type II GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 DB34_00795 9031842b11393521725e46b486b2e368 324 Pfam PF01636 Phosphotransferase enzyme family 28 262 1.2E-34 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase DB34_00795 9031842b11393521725e46b486b2e368 324 TIGRFAM TIGR00938 thrB_alt: homoserine kinase 1 312 1.3E-111 T 11-10-2018 IPR005280 Homoserine kinase, type II GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 DB34_00795 9031842b11393521725e46b486b2e368 324 SUPERFAMILY SSF56112 5 315 7.73E-78 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily DB34_00795 9031842b11393521725e46b486b2e368 324 Gene3D G3DSA:3.30.200.20 1 104 1.3E-36 T 11-10-2018 DB34_02220 9d17c2db4fb8ee6ae4a437523cd8f478 103 SUPERFAMILY SSF48295 3 63 8.89E-14 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 DB34_02220 9d17c2db4fb8ee6ae4a437523cd8f478 103 Pfam PF01527 Transposase 5 56 2.4E-8 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 DB34_09540 0fa5b14aec4081364379882c6cc5e952 205 PRINTS PR00625 DnaJ domain signature 177 197 2.7E-7 T 11-10-2018 IPR001623 DnaJ domain DB34_09540 0fa5b14aec4081364379882c6cc5e952 205 PRINTS PR00625 DnaJ domain signature 142 160 2.7E-7 T 11-10-2018 IPR001623 DnaJ domain DB34_09540 0fa5b14aec4081364379882c6cc5e952 205 PRINTS PR00625 DnaJ domain signature 160 175 2.7E-7 T 11-10-2018 IPR001623 DnaJ domain DB34_09540 0fa5b14aec4081364379882c6cc5e952 205 Pfam PF00226 DnaJ domain 143 193 2.7E-11 T 11-10-2018 IPR001623 DnaJ domain DB34_09540 0fa5b14aec4081364379882c6cc5e952 205 SMART SM00271 139 197 1.3E-10 T 11-10-2018 IPR001623 DnaJ domain DB34_09540 0fa5b14aec4081364379882c6cc5e952 205 SUPERFAMILY SSF46565 115 192 3.43E-14 T 11-10-2018 IPR036869 Chaperone J-domain superfamily DB34_09540 0fa5b14aec4081364379882c6cc5e952 205 Gene3D G3DSA:1.10.287.110 112 196 7.5E-13 T 11-10-2018 IPR036869 Chaperone J-domain superfamily DB34_11415 2d2f2bd821a71799ad81a4ae587eb0de 202 Gene3D G3DSA:1.10.260.40 14 71 1.6E-15 T 11-10-2018 DB34_11415 2d2f2bd821a71799ad81a4ae587eb0de 202 Pfam PF01381 Helix-turn-helix 19 69 1.7E-14 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DB34_11415 2d2f2bd821a71799ad81a4ae587eb0de 202 SMART SM00530 18 71 1.7E-10 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DB34_11415 2d2f2bd821a71799ad81a4ae587eb0de 202 SUPERFAMILY SSF47413 15 70 2.95E-14 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DB34_12635 087b4667bebe7d3c83a508283852f28b 368 Pfam PF02504 Fatty acid synthesis protein 20 338 6.6E-101 T 11-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 DB34_12635 087b4667bebe7d3c83a508283852f28b 368 SUPERFAMILY SSF53659 19 348 1.11E-94 T 11-10-2018 DB34_12635 087b4667bebe7d3c83a508283852f28b 368 PIRSF PIRSF002465 16 352 2.2E-115 T 11-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 DB34_12635 087b4667bebe7d3c83a508283852f28b 368 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 19 348 2.9E-92 T 11-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 DB34_12635 087b4667bebe7d3c83a508283852f28b 368 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 355 129.955 T 11-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 DB34_12635 087b4667bebe7d3c83a508283852f28b 368 Gene3D G3DSA:3.40.718.10 17 360 5.1E-116 T 11-10-2018 DB34_07045 e23ea34bfa6086e5802fb4db1f4a2560 818 Pfam PF00593 TonB dependent receptor 387 814 2.1E-30 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel DB34_07045 e23ea34bfa6086e5802fb4db1f4a2560 818 Gene3D G3DSA:2.40.170.20 122 818 1.3E-109 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DB34_07045 e23ea34bfa6086e5802fb4db1f4a2560 818 SUPERFAMILY SSF56935 111 818 1.5E-86 T 11-10-2018 DB34_08725 88002033f0d9cfbb42a2a883c8e69cda 61 Gene3D G3DSA:3.30.1390.20 3 61 2.5E-22 T 11-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily DB34_08725 88002033f0d9cfbb42a2a883c8e69cda 61 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 4 61 18.374 T 11-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_08725 88002033f0d9cfbb42a2a883c8e69cda 61 PIRSF PIRSF002211 1 61 1.1E-22 T 11-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_08725 88002033f0d9cfbb42a2a883c8e69cda 61 SUPERFAMILY SSF55129 5 60 3.53E-18 T 11-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily DB34_08725 88002033f0d9cfbb42a2a883c8e69cda 61 Pfam PF00327 Ribosomal protein L30p/L7e 8 57 1.1E-16 T 11-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain DB34_08725 88002033f0d9cfbb42a2a883c8e69cda 61 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 8 61 4.8E-22 T 11-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_01735 6576f3ec8db6c4afafb3e569979c2ec9 427 SUPERFAMILY SSF103473 17 404 1.7E-45 T 11-10-2018 IPR036259 MFS transporter superfamily DB34_01735 6576f3ec8db6c4afafb3e569979c2ec9 427 Gene3D G3DSA:1.20.1250.20 17 206 8.5E-18 T 11-10-2018 DB34_01735 6576f3ec8db6c4afafb3e569979c2ec9 427 Gene3D G3DSA:1.20.1250.20 214 408 2.5E-17 T 11-10-2018 DB34_01735 6576f3ec8db6c4afafb3e569979c2ec9 427 Pfam PF07690 Major Facilitator Superfamily 35 309 3.3E-21 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DB34_00075 dd6e9be85c6c6ebe863f3b46e7bd0a06 156 Pfam PF04379 ApaG domain 45 129 6.6E-32 T 11-10-2018 IPR007474 ApaG domain DB34_00075 dd6e9be85c6c6ebe863f3b46e7bd0a06 156 SUPERFAMILY SSF110069 30 153 2.75E-45 T 11-10-2018 IPR036767 ApaG domain superfamily DB34_00075 dd6e9be85c6c6ebe863f3b46e7bd0a06 156 Gene3D G3DSA:2.60.40.1470 26 156 2.1E-44 T 11-10-2018 IPR036767 ApaG domain superfamily DB34_00075 dd6e9be85c6c6ebe863f3b46e7bd0a06 156 Hamap MF_00791 Protein ApaG [apaG]. 27 156 29.457 T 11-10-2018 IPR023065 Uncharacterised protein family ApaG DB34_13585 742a368404dc7e5ba7a201f39122b013 416 Pfam PF13546 DDE superfamily endonuclease 57 237 4.8E-44 T 11-10-2018 IPR038721 Transposase IS701-like, DDE domain DB34_13585 742a368404dc7e5ba7a201f39122b013 416 SUPERFAMILY SSF53098 71 404 9.1E-28 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily DB34_07090 906af421a1f12d53ce8065463b7bfb35 161 Gene3D G3DSA:2.60.40.790 17 159 7.3E-34 T 11-10-2018 IPR008978 HSP20-like chaperone DB34_07090 906af421a1f12d53ce8065463b7bfb35 161 Pfam PF00011 Hsp20/alpha crystallin family 57 159 5.3E-22 T 11-10-2018 IPR002068 Alpha crystallin/Hsp20 domain DB34_07090 906af421a1f12d53ce8065463b7bfb35 161 SUPERFAMILY SSF49764 30 158 2.93E-32 T 11-10-2018 IPR008978 HSP20-like chaperone DB34_12485 370efa7d83581a2ed9d329748c044c48 633 SUPERFAMILY SSF90123 50 372 4.05E-61 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DB34_12485 370efa7d83581a2ed9d329748c044c48 633 Gene3D G3DSA:1.20.1560.10 54 375 4.8E-110 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DB34_12485 370efa7d83581a2ed9d329748c044c48 633 SMART SM00382 415 607 2.6E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_12485 370efa7d83581a2ed9d329748c044c48 633 SUPERFAMILY SSF52540 385 625 2.52E-89 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_12485 370efa7d83581a2ed9d329748c044c48 633 Pfam PF00664 ABC transporter transmembrane region 68 339 2.5E-37 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DB34_12485 370efa7d83581a2ed9d329748c044c48 633 ProSitePatterns PS00211 ABC transporters family signature. 527 541 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB34_12485 370efa7d83581a2ed9d329748c044c48 633 Gene3D G3DSA:3.40.50.300 383 633 1.9E-92 T 11-10-2018 DB34_12485 370efa7d83581a2ed9d329748c044c48 633 Pfam PF00005 ABC transporter 406 555 5.3E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB34_05540 58ed5ddc0fc83580319be4452624af4c 308 Pfam PF05013 N-formylglutamate amidohydrolase 46 273 4.4E-66 T 11-10-2018 IPR007709 N-formylglutamate amidohydrolase DB34_05540 58ed5ddc0fc83580319be4452624af4c 308 Gene3D G3DSA:3.40.630.40 28 304 1.2E-90 T 11-10-2018 DB34_05540 58ed5ddc0fc83580319be4452624af4c 308 SUPERFAMILY SSF53187 40 300 4.39E-80 T 11-10-2018 DB34_02585 07123619ba499eca29192155e8ae87a3 385 Pfam PF02405 Permease MlaE 171 379 1.4E-55 T 11-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 DB34_04005 b084ec6bc35d54308fd6fe442daf53a2 159 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 2 146 30.749 T 11-10-2018 IPR003791 Protein of unknown function UPF0178 DB34_04005 b084ec6bc35d54308fd6fe442daf53a2 159 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 16 143 2.2E-46 T 11-10-2018 IPR003791 Protein of unknown function UPF0178 DB34_00440 54cddb920204883b5c5c5771355b0848 345 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 14 248 33.54 T 11-10-2018 IPR017689 Outer membrane protein assembly factor BamD DB34_00440 54cddb920204883b5c5c5771355b0848 345 SUPERFAMILY SSF48452 48 239 2.53E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB34_00440 54cddb920204883b5c5c5771355b0848 345 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 18 254 4.3E-82 T 11-10-2018 IPR017689 Outer membrane protein assembly factor BamD DB34_00440 54cddb920204883b5c5c5771355b0848 345 Pfam PF13525 Outer membrane lipoprotein 48 240 8.7E-55 T 11-10-2018 IPR039565 Outer membrane lipoprotein BamD-like DB34_00440 54cddb920204883b5c5c5771355b0848 345 Gene3D G3DSA:1.25.40.10 46 259 4.9E-57 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB34_10680 986db0ba6f5f944efe99aafe87c3f3b1 84 Gene3D G3DSA:2.30.40.10 1 79 5.5E-6 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DB34_04500 51223a1c7a4361bb39c3c80d4c384b38 478 SUPERFAMILY SSF53187 148 464 4.19E-101 T 11-10-2018 DB34_04500 51223a1c7a4361bb39c3c80d4c384b38 478 Gene3D G3DSA:3.40.220.10 6 135 5.4E-15 T 11-10-2018 DB34_04500 51223a1c7a4361bb39c3c80d4c384b38 478 PRINTS PR00481 Cytosol aminopeptidase signature 289 310 9.5E-43 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DB34_04500 51223a1c7a4361bb39c3c80d4c384b38 478 PRINTS PR00481 Cytosol aminopeptidase signature 230 247 9.5E-43 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DB34_04500 51223a1c7a4361bb39c3c80d4c384b38 478 PRINTS PR00481 Cytosol aminopeptidase signature 252 273 9.5E-43 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DB34_04500 51223a1c7a4361bb39c3c80d4c384b38 478 PRINTS PR00481 Cytosol aminopeptidase signature 311 331 9.5E-43 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DB34_04500 51223a1c7a4361bb39c3c80d4c384b38 478 PRINTS PR00481 Cytosol aminopeptidase signature 339 354 9.5E-43 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DB34_04500 51223a1c7a4361bb39c3c80d4c384b38 478 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 153 458 3.6E-100 T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 DB34_04500 51223a1c7a4361bb39c3c80d4c384b38 478 Gene3D G3DSA:3.40.630.10 139 466 1.9E-118 T 11-10-2018 DB34_04500 51223a1c7a4361bb39c3c80d4c384b38 478 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 315 322 - T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 DB34_01900 7b0852da820642a01636c9644391fc50 142 Pfam PF07845 Protein of unknown function (DUF1636) 18 133 4.0E-30 T 11-10-2018 IPR012863 Protein of unknown function DUF1636 DB34_01900 7b0852da820642a01636c9644391fc50 142 SUPERFAMILY SSF52833 15 113 6.93E-5 T 11-10-2018 IPR036249 Thioredoxin-like superfamily DB34_01295 2245cea0a08fa34dd7a5769aacee8a8b 730 Gene3D G3DSA:3.40.30.10 619 727 1.1E-11 T 11-10-2018 DB34_01295 2245cea0a08fa34dd7a5769aacee8a8b 730 Pfam PF13899 Thioredoxin-like 627 705 1.8E-13 T 11-10-2018 DB34_01295 2245cea0a08fa34dd7a5769aacee8a8b 730 SUPERFAMILY SSF52833 629 725 7.09E-14 T 11-10-2018 IPR036249 Thioredoxin-like superfamily DB34_01295 2245cea0a08fa34dd7a5769aacee8a8b 730 Pfam PF11412 Disulphide bond corrector protein DsbC 79 191 3.7E-19 T 11-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain DB34_01500 a0a138e072a01429fbb9ed47323d5d1a 264 Gene3D G3DSA:3.30.2400.30 4 254 1.8E-77 T 11-10-2018 DB34_01500 a0a138e072a01429fbb9ed47323d5d1a 264 Pfam PF04454 Encapsulating protein for peroxidase 1 251 3.7E-94 T 11-10-2018 IPR007544 Encapsulating protein for peroxidase GO:0008233|GO:0042742 DB34_01500 a0a138e072a01429fbb9ed47323d5d1a 264 PIRSF PIRSF019254 1 264 8.2E-96 T 11-10-2018 IPR007544 Encapsulating protein for peroxidase GO:0008233|GO:0042742 DB34_01500 a0a138e072a01429fbb9ed47323d5d1a 264 Gene3D G3DSA:3.30.2320.10 132 260 1.8E-77 T 11-10-2018 DB34_04120 540fb7fc7de0f74f283c347c804594dc 113 SUPERFAMILY SSF143011 1 87 6.87E-6 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily DB34_04120 540fb7fc7de0f74f283c347c804594dc 113 Gene3D G3DSA:3.30.2310.20 2 90 1.5E-7 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily DB34_01545 af2949faa47cf4f34a7538ff20cbba08 420 SUPERFAMILY SSF53187 6 413 4.29E-93 T 11-10-2018 DB34_01545 af2949faa47cf4f34a7538ff20cbba08 420 Gene3D G3DSA:3.30.70.360 218 332 2.1E-155 T 11-10-2018 DB34_01545 af2949faa47cf4f34a7538ff20cbba08 420 Gene3D G3DSA:3.40.630.10 24 407 2.1E-155 T 11-10-2018 DB34_01545 af2949faa47cf4f34a7538ff20cbba08 420 Pfam PF07687 Peptidase dimerisation domain 215 317 4.1E-7 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain DB34_01545 af2949faa47cf4f34a7538ff20cbba08 420 PIRSF PIRSF001235 10 418 1.6E-136 T 11-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 DB34_01545 af2949faa47cf4f34a7538ff20cbba08 420 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 16 412 3.3E-135 T 11-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 DB34_01545 af2949faa47cf4f34a7538ff20cbba08 420 Pfam PF01546 Peptidase family M20/M25/M40 86 411 8.2E-38 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 DB34_01545 af2949faa47cf4f34a7538ff20cbba08 420 SUPERFAMILY SSF55031 218 334 6.8E-30 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain DB34_05075 a85666fe0d8372faa9e642548b19f51c 327 Pfam PF00248 Aldo/keto reductase family 17 308 8.0E-76 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain DB34_05075 a85666fe0d8372faa9e642548b19f51c 327 Gene3D G3DSA:3.20.20.100 1 327 7.0E-130 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DB34_05075 a85666fe0d8372faa9e642548b19f51c 327 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 140 157 - T 11-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 DB34_05075 a85666fe0d8372faa9e642548b19f51c 327 PRINTS PR00069 Aldo-keto reductase signature 140 157 3.4E-14 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DB34_05075 a85666fe0d8372faa9e642548b19f51c 327 PRINTS PR00069 Aldo-keto reductase signature 109 127 3.4E-14 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DB34_05075 a85666fe0d8372faa9e642548b19f51c 327 PRINTS PR00069 Aldo-keto reductase signature 45 69 3.4E-14 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DB34_05075 a85666fe0d8372faa9e642548b19f51c 327 SUPERFAMILY SSF51430 11 314 6.02E-99 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DB34_07425 2f242fbb2783d6845f2aacd53f274439 285 Gene3D G3DSA:3.40.140.80 135 276 1.5E-51 T 11-10-2018 DB34_07425 2f242fbb2783d6845f2aacd53f274439 285 Pfam PF06230 Protein of unknown function (DUF1009) 59 269 7.2E-74 T 11-10-2018 IPR010415 Protein of unknown function DUF1009 KEGG: 00540+3.6.1.54 DB34_07425 2f242fbb2783d6845f2aacd53f274439 285 Gene3D G3DSA:3.40.50.20 3 133 8.5E-38 T 11-10-2018 DB34_05720 55980d660e7822039211473d9a4ff5ef 226 Gene3D G3DSA:1.20.120.1940 15 117 8.4E-8 T 11-10-2018 DB34_05720 55980d660e7822039211473d9a4ff5ef 226 Pfam PF10938 YfdX protein 48 210 8.6E-43 T 11-10-2018 IPR021236 Uncharacterised protein family YfdX DB34_05440 b4afbf7765b0cfd472b51390decb675e 394 Gene3D G3DSA:3.30.930.10 21 335 8.1E-58 T 11-10-2018 DB34_05440 b4afbf7765b0cfd472b51390decb675e 394 PIRSF PIRSF001549 21 376 5.4E-36 T 11-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 DB34_05440 b4afbf7765b0cfd472b51390decb675e 394 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 34 375 22.949 T 11-10-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 DB34_05440 b4afbf7765b0cfd472b51390decb675e 394 Pfam PF13393 Histidyl-tRNA synthetase 27 327 3.8E-86 T 11-10-2018 DB34_05440 b4afbf7765b0cfd472b51390decb675e 394 SUPERFAMILY SSF55681 24 310 2.49E-41 T 11-10-2018 DB34_06265 16a4981c5999a724a30fb28d439548d9 732 Gene3D G3DSA:2.170.16.10 381 539 4.1E-7 T 11-10-2018 DB34_06265 16a4981c5999a724a30fb28d439548d9 732 Pfam PF11765 Hyphally regulated cell wall protein N-terminal 140 372 6.2E-17 T 11-10-2018 IPR021031 Hyphally-regulated cell wall protein, N-terminal DB34_06265 16a4981c5999a724a30fb28d439548d9 732 Pfam PF13403 Hint domain 383 523 3.0E-43 T 11-10-2018 IPR028992 Hedgehog/Intein (Hint) domain DB34_06265 16a4981c5999a724a30fb28d439548d9 732 SUPERFAMILY SSF51294 383 521 6.59E-12 T 11-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 DB34_02180 26304dca88c59b870fb6cdca1ca4eae7 246 Gene3D G3DSA:3.40.50.300 2 246 8.2E-55 T 11-10-2018 DB34_02180 26304dca88c59b870fb6cdca1ca4eae7 246 TIGRFAM TIGR03411 urea_trans_UrtD: urea ABC transporter, ATP-binding protein UrtD 6 246 1.9E-113 T 11-10-2018 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD DB34_02180 26304dca88c59b870fb6cdca1ca4eae7 246 Pfam PF00005 ABC transporter 23 176 1.5E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB34_02180 26304dca88c59b870fb6cdca1ca4eae7 246 SUPERFAMILY SSF52540 6 244 2.77E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_02180 26304dca88c59b870fb6cdca1ca4eae7 246 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 224 245 1.1E-7 T 11-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal DB34_01760 f1e8e6bafd3fce517c750665083fe73b 769 Gene3D G3DSA:2.170.130.10 74 201 1.8E-34 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily DB34_01760 f1e8e6bafd3fce517c750665083fe73b 769 Gene3D G3DSA:2.40.170.20 206 769 3.4E-93 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DB34_01760 f1e8e6bafd3fce517c750665083fe73b 769 SUPERFAMILY SSF56935 84 769 2.54E-97 T 11-10-2018 DB34_01760 f1e8e6bafd3fce517c750665083fe73b 769 Pfam PF07715 TonB-dependent Receptor Plug Domain 90 190 2.8E-17 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain DB34_01760 f1e8e6bafd3fce517c750665083fe73b 769 Pfam PF00593 TonB dependent receptor 242 767 3.0E-39 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel DB34_00995 57e3dc58ae8ac9042e80b28eee46825e 492 Gene3D G3DSA:3.30.1490.270 365 425 6.8E-24 T 11-10-2018 DB34_00995 57e3dc58ae8ac9042e80b28eee46825e 492 Gene3D G3DSA:3.40.50.11290 231 328 1.6E-40 T 11-10-2018 DB34_00995 57e3dc58ae8ac9042e80b28eee46825e 492 SUPERFAMILY SSF56059 43 483 1.46E-57 T 11-10-2018 DB34_00995 57e3dc58ae8ac9042e80b28eee46825e 492 Pfam PF14403 Circularly permuted ATP-grasp type 2 93 468 5.4E-157 T 11-10-2018 IPR025841 Circularly permuted ATP-grasp type 2 DB34_00995 57e3dc58ae8ac9042e80b28eee46825e 492 PIRSF PIRSF005522 15 492 1.4E-207 T 11-10-2018 IPR016450 Uncharacterised conserved protein UCP005522 DB34_10360 09eb9419fd7ef1c5444591f86fbc4540 263 SMART SM00382 31 224 2.5E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_10360 09eb9419fd7ef1c5444591f86fbc4540 263 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB34_10360 09eb9419fd7ef1c5444591f86fbc4540 263 Pfam PF00005 ABC transporter 23 164 7.9E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB34_10360 09eb9419fd7ef1c5444591f86fbc4540 263 SUPERFAMILY SSF52540 6 230 2.35E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_10360 09eb9419fd7ef1c5444591f86fbc4540 263 Gene3D G3DSA:3.40.50.300 1 232 1.0E-60 T 11-10-2018 DB34_12425 8bce097fe06f5a01ca2976622bdbd619 150 Gene3D G3DSA:3.90.1010.10 6 146 5.8E-36 T 11-10-2018 DB34_12425 8bce097fe06f5a01ca2976622bdbd619 150 TIGRFAM TIGR01994 SUF_scaf_2: SUF system FeS assembly protein, NifU family 9 145 3.3E-33 T 11-10-2018 DB34_12425 8bce097fe06f5a01ca2976622bdbd619 150 SUPERFAMILY SSF82649 7 147 7.59E-35 T 11-10-2018 DB34_12425 8bce097fe06f5a01ca2976622bdbd619 150 Pfam PF01592 NifU-like N terminal domain 12 118 3.1E-15 T 11-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 DB34_13470 5f61050d93ba90b415b446e0db86bc14 538 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 102 273 6.3E-8 T 11-10-2018 IPR013830 SGNH hydrolase-type esterase domain DB34_13470 5f61050d93ba90b415b446e0db86bc14 538 Gene3D G3DSA:3.40.50.1110 86 286 1.3E-12 T 11-10-2018 IPR036514 SGNH hydrolase superfamily DB34_13470 5f61050d93ba90b415b446e0db86bc14 538 SUPERFAMILY SSF52266 96 267 2.75E-15 T 11-10-2018 DB34_11710 53b532db6f96e0c1a07d1d15257d9b10 387 Gene3D G3DSA:1.10.443.10 157 363 8.7E-26 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 DB34_11710 53b532db6f96e0c1a07d1d15257d9b10 387 Gene3D G3DSA:1.10.150.130 57 156 1.1E-7 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal DB34_11710 53b532db6f96e0c1a07d1d15257d9b10 387 Pfam PF00589 Phage integrase family 160 351 4.8E-16 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 DB34_11710 53b532db6f96e0c1a07d1d15257d9b10 387 SUPERFAMILY SSF56349 77 359 5.3E-38 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DB34_03440 a6bf22254443a9c6b789829182ca0fe0 231 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 31 227 1.6E-42 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DB34_03440 a6bf22254443a9c6b789829182ca0fe0 231 SUPERFAMILY SSF53254 28 227 2.57E-41 T 11-10-2018 IPR029033 Histidine phosphatase superfamily DB34_03440 a6bf22254443a9c6b789829182ca0fe0 231 Gene3D G3DSA:3.40.50.1240 28 230 1.5E-37 T 11-10-2018 IPR029033 Histidine phosphatase superfamily DB34_03440 a6bf22254443a9c6b789829182ca0fe0 231 SMART SM00855 30 188 1.1E-11 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DB34_04655 b37dfd1958cf415b0939aeb783d9a760 493 Gene3D G3DSA:1.20.1740.10 19 470 9.1E-53 T 11-10-2018 DB34_04655 b37dfd1958cf415b0939aeb783d9a760 493 PIRSF PIRSF006060 6 474 1.5E-55 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DB34_04655 b37dfd1958cf415b0939aeb783d9a760 493 Pfam PF00324 Amino acid permease 28 461 2.4E-107 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 DB34_12640 a543b51a0c5c8f26e8f4a4daab3871e1 67 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 2.6E-27 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_12640 a543b51a0c5c8f26e8f4a4daab3871e1 67 SUPERFAMILY SSF57829 1 55 1.46E-23 T 11-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 DB34_12640 a543b51a0c5c8f26e8f4a4daab3871e1 67 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 55 20.986 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_12640 a543b51a0c5c8f26e8f4a4daab3871e1 67 Pfam PF01783 Ribosomal L32p protein family 2 56 2.9E-28 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_03665 11e0f7ecfd43b85d6e1f762dc8928eca 415 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 19 415 2.2E-112 T 11-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 DB34_03665 11e0f7ecfd43b85d6e1f762dc8928eca 415 Gene3D G3DSA:3.10.20.340 287 415 2.5E-40 T 11-10-2018 DB34_03665 11e0f7ecfd43b85d6e1f762dc8928eca 415 Gene3D G3DSA:3.60.70.12 16 286 3.7E-89 T 11-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 DB34_03665 11e0f7ecfd43b85d6e1f762dc8928eca 415 SUPERFAMILY SSF56266 20 411 1.44E-134 T 11-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 DB34_03665 11e0f7ecfd43b85d6e1f762dc8928eca 415 Pfam PF01960 ArgJ family 26 415 2.3E-136 T 11-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 DB34_03665 11e0f7ecfd43b85d6e1f762dc8928eca 415 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 31 413 4.0E-134 T 11-10-2018 DB34_03665 11e0f7ecfd43b85d6e1f762dc8928eca 415 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 415 148.849 T 11-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 DB34_04330 540e81ed4a09d7016e378b89927acae0 244 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 11-10-2018 IPR018336 Ribonuclease PH, conserved site DB34_04330 540e81ed4a09d7016e378b89927acae0 244 Pfam PF01138 3' exoribonuclease family, domain 1 10 139 1.4E-22 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DB34_04330 540e81ed4a09d7016e378b89927acae0 244 Hamap MF_00564 Ribonuclease PH [rph]. 11 237 43.315 T 11-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 DB34_04330 540e81ed4a09d7016e378b89927acae0 244 SUPERFAMILY SSF54211 1 181 6.58E-45 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DB34_04330 540e81ed4a09d7016e378b89927acae0 244 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 1.3E-106 T 11-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 DB34_04330 540e81ed4a09d7016e378b89927acae0 244 SUPERFAMILY SSF55666 153 236 3.14E-21 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DB34_04330 540e81ed4a09d7016e378b89927acae0 244 Pfam PF03725 3' exoribonuclease family, domain 2 159 224 1.1E-6 T 11-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DB34_04330 540e81ed4a09d7016e378b89927acae0 244 Gene3D G3DSA:3.30.230.70 10 238 1.5E-58 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DB34_10910 1f96f801f31c0f62fa4e9dbaed065f00 357 SUPERFAMILY SSF111342 3 284 4.45E-81 T 11-10-2018 IPR036074 CbiD superfamily GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 DB34_10910 1f96f801f31c0f62fa4e9dbaed065f00 357 Gene3D G3DSA:3.30.2110.10 10 181 4.8E-49 T 11-10-2018 IPR036074 CbiD superfamily GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 DB34_10910 1f96f801f31c0f62fa4e9dbaed065f00 357 Hamap MF_00787 Cobalt-precorrin-5B C(1)-methyltransferase [cbiD]. 8 357 26.815 T 11-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 DB34_10910 1f96f801f31c0f62fa4e9dbaed065f00 357 Pfam PF01888 CbiD 8 266 1.7E-86 T 11-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 DB34_10910 1f96f801f31c0f62fa4e9dbaed065f00 357 PIRSF PIRSF026782 4 357 3.0E-117 T 11-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 DB34_10910 1f96f801f31c0f62fa4e9dbaed065f00 357 TIGRFAM TIGR00312 cbiD: cobalamin biosynthesis protein CbiD 15 308 1.4E-51 T 11-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 DB34_09230 c05f22600d2b77c634c80d082d7c246c 68 Pfam PF04325 Protein of unknown function (DUF465) 13 58 1.4E-13 T 11-10-2018 IPR007420 Protein of unknown function DUF465 DB34_09230 c05f22600d2b77c634c80d082d7c246c 68 Gene3D G3DSA:1.20.58.660 2 61 1.1E-6 T 11-10-2018 DB34_00865 f61ee21649d316111a7a4d443e559c2b 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 26.489 T 11-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 DB34_00865 f61ee21649d316111a7a4d443e559c2b 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 5.7E-35 T 11-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 DB34_00865 f61ee21649d316111a7a4d443e559c2b 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 4.2E-27 T 11-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 DB34_00865 f61ee21649d316111a7a4d443e559c2b 72 Gene3D G3DSA:2.40.50.140 1 72 4.3E-37 T 11-10-2018 DB34_00865 f61ee21649d316111a7a4d443e559c2b 72 SMART SM00316 4 72 0.002 T 11-10-2018 IPR022967 RNA-binding domain, S1 DB34_00865 f61ee21649d316111a7a4d443e559c2b 72 SUPERFAMILY SSF50249 1 71 1.39E-27 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB34_12725 5092f9fd438c3e23db8e779ff8df1013 171 Pfam PF13801 Heavy-metal resistance 7 137 4.0E-9 T 11-10-2018 IPR025961 Heavy-metal resistance protein DB34_12725 5092f9fd438c3e23db8e779ff8df1013 171 Gene3D G3DSA:1.20.120.1490 45 157 1.2E-14 T 11-10-2018 DB34_09530 5501e5d7719185422a41ab6c23134e2e 638 Pfam PF06213 Cobalamin biosynthesis protein CobT 22 297 2.6E-72 T 11-10-2018 IPR006538 Cobalt chelatase, CobT subunit GO:0009236 KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376 DB34_09530 5501e5d7719185422a41ab6c23134e2e 638 SMART SM00327 422 624 1.5E-9 T 11-10-2018 IPR002035 von Willebrand factor, type A DB34_09530 5501e5d7719185422a41ab6c23134e2e 638 PIRSF PIRSF031715 15 637 4.1E-242 T 11-10-2018 IPR006538 Cobalt chelatase, CobT subunit GO:0009236 KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376 DB34_09530 5501e5d7719185422a41ab6c23134e2e 638 Gene3D G3DSA:3.40.50.410 422 625 2.3E-8 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily DB34_09530 5501e5d7719185422a41ab6c23134e2e 638 SUPERFAMILY SSF53300 425 620 3.89E-16 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily DB34_09530 5501e5d7719185422a41ab6c23134e2e 638 TIGRFAM TIGR01651 CobT: cobaltochelatase, CobT subunit 26 629 7.4E-230 T 11-10-2018 IPR006538 Cobalt chelatase, CobT subunit GO:0009236 KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376 DB34_09530 5501e5d7719185422a41ab6c23134e2e 638 Pfam PF11775 Cobalamin biosynthesis protein CobT VWA domain 411 628 1.0E-100 T 11-10-2018 IPR025861 Cobalamin biosynthesis protein CobT VWA domain KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376 DB34_07165 ef714be6a29c8600935612567f8a8e49 621 Pfam PF13372 Alginate export 412 610 4.3E-23 T 11-10-2018 IPR025388 Alginate export domain DB34_13015 9eb70293d1f945b19f8601f33579b8cc 191 Pfam PF09335 SNARE associated Golgi protein 14 132 6.2E-14 T 11-10-2018 IPR032816 SNARE associated Golgi protein DB34_00660 1e4f9734fb8e4adfc7da0a9697661562 279 Gene3D G3DSA:3.30.1300.10 178 279 2.1E-27 T 11-10-2018 DB34_00660 1e4f9734fb8e4adfc7da0a9697661562 279 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 276 6.3E-84 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 DB34_00660 1e4f9734fb8e4adfc7da0a9697661562 279 SUPERFAMILY SSF52374 1 278 1.69E-95 T 11-10-2018 DB34_00660 1e4f9734fb8e4adfc7da0a9697661562 279 Gene3D G3DSA:3.40.50.620 1 177 3.1E-67 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DB34_00660 1e4f9734fb8e4adfc7da0a9697661562 279 Hamap MF_00158 Pantothenate synthetase [panC]. 2 278 36.782 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 DB34_00660 1e4f9734fb8e4adfc7da0a9697661562 279 Pfam PF02569 Pantoate-beta-alanine ligase 2 276 2.6E-92 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 DB34_09290 20e3a065242f0a13360d49277e0d5028 339 Gene3D G3DSA:1.10.620.20 2 322 2.3E-94 T 11-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 DB34_09290 20e3a065242f0a13360d49277e0d5028 339 SUPERFAMILY SSF47240 24 333 4.87E-89 T 11-10-2018 IPR009078 Ferritin-like superfamily DB34_09290 20e3a065242f0a13360d49277e0d5028 339 PIRSF PIRSF000355 3 332 6.9E-102 T 11-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DB34_09290 20e3a065242f0a13360d49277e0d5028 339 Pfam PF00268 Ribonucleotide reductase, small chain 24 296 4.3E-77 T 11-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DB34_00710 bb426cfc0e0abb5004c87f8b0f6f081c 220 SUPERFAMILY SSF64288 36 208 4.55E-22 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DB34_00710 bb426cfc0e0abb5004c87f8b0f6f081c 220 Gene3D G3DSA:3.40.1410.10 24 213 2.9E-10 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DB34_10765 47352c0a54539562efe121f8fa4c7c64 173 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 144 163 - T 11-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 DB34_10765 47352c0a54539562efe121f8fa4c7c64 173 Pfam PF01042 Endoribonuclease L-PSP 72 168 4.2E-15 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 DB34_10765 47352c0a54539562efe121f8fa4c7c64 173 SUPERFAMILY SSF55298 40 170 4.56E-22 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 DB34_10765 47352c0a54539562efe121f8fa4c7c64 173 Gene3D G3DSA:3.30.1330.40 29 171 7.0E-25 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 DB34_07320 70ff6b3d8393365ca6fee11e7f3ddaee 288 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 21 243 6.1E-6 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase DB34_07320 70ff6b3d8393365ca6fee11e7f3ddaee 288 SUPERFAMILY SSF56219 15 277 8.64E-24 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily DB34_07320 70ff6b3d8393365ca6fee11e7f3ddaee 288 Gene3D G3DSA:3.60.10.10 9 275 8.4E-18 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily DB34_03755 50c4e8932f165ff0e3081c1c66206908 473 SUPERFAMILY SSF51120 114 240 4.32E-6 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DB34_03755 50c4e8932f165ff0e3081c1c66206908 473 Gene3D G3DSA:2.150.10.10 131 247 5.5E-7 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DB34_03755 50c4e8932f165ff0e3081c1c66206908 473 SUPERFAMILY SSF51120 275 463 1.15E-8 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DB34_03755 50c4e8932f165ff0e3081c1c66206908 473 Gene3D G3DSA:2.150.10.10 355 470 1.5E-6 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DB34_01060 2cf4587a8d749270071ed6982b1f4843 190 Pfam PF03358 NADPH-dependent FMN reductase 11 155 9.0E-34 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 DB34_01060 2cf4587a8d749270071ed6982b1f4843 190 Gene3D G3DSA:3.40.50.360 3 190 6.6E-57 T 11-10-2018 IPR029039 Flavoprotein-like superfamily DB34_01060 2cf4587a8d749270071ed6982b1f4843 190 SUPERFAMILY SSF52218 10 181 1.13E-44 T 11-10-2018 IPR029039 Flavoprotein-like superfamily DB34_08360 f143e0292ad955573728daeab50bd598 255 Gene3D G3DSA:1.10.8.60 185 248 1.9E-5 T 11-10-2018 DB34_08360 f143e0292ad955573728daeab50bd598 255 SUPERFAMILY SSF52540 38 230 6.09E-14 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_08360 f143e0292ad955573728daeab50bd598 255 Gene3D G3DSA:3.40.50.300 18 180 1.1E-14 T 11-10-2018 DB34_03150 378873a18faee0f4d70188d827858373 357 SMART SM00530 9 62 3.1E-6 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DB34_03150 378873a18faee0f4d70188d827858373 357 SUPERFAMILY SSF47413 5 66 3.68E-9 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DB34_03150 378873a18faee0f4d70188d827858373 357 Pfam PF01381 Helix-turn-helix 16 61 7.3E-7 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DB34_03150 378873a18faee0f4d70188d827858373 357 Pfam PF06114 IrrE N-terminal-like domain 151 265 3.3E-19 T 11-10-2018 IPR010359 IrrE N-terminal-like domain DB34_03150 378873a18faee0f4d70188d827858373 357 Gene3D G3DSA:1.10.260.40 4 65 5.9E-9 T 11-10-2018 DB34_09765 527cb87ed939be4c3c401e4edd7e5b15 246 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 12 228 3.5E-63 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 DB34_09765 527cb87ed939be4c3c401e4edd7e5b15 246 Gene3D G3DSA:3.40.50.620 8 245 2.2E-65 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DB34_09765 527cb87ed939be4c3c401e4edd7e5b15 246 Pfam PF06508 Queuosine biosynthesis protein QueC 12 235 2.1E-74 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 DB34_09765 527cb87ed939be4c3c401e4edd7e5b15 246 SUPERFAMILY SSF52402 10 234 1.79E-56 T 11-10-2018 DB34_09765 527cb87ed939be4c3c401e4edd7e5b15 246 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 10 241 50.558 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 DB34_09765 527cb87ed939be4c3c401e4edd7e5b15 246 PIRSF PIRSF006293 8 246 5.8E-72 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 DB34_09740 e60d3aeb34e774740d68f901fd236f39 279 SUPERFAMILY SSF51735 16 266 5.61E-66 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily DB34_09740 e60d3aeb34e774740d68f901fd236f39 279 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 24 262 2.9E-88 T 11-10-2018 DB34_09740 e60d3aeb34e774740d68f901fd236f39 279 Gene3D G3DSA:3.40.50.720 11 279 9.1E-59 T 11-10-2018 DB34_09740 e60d3aeb34e774740d68f901fd236f39 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 94 105 2.7E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_09740 e60d3aeb34e774740d68f901fd236f39 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 225 245 2.7E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_09740 e60d3aeb34e774740d68f901fd236f39 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 143 159 2.7E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_09740 e60d3aeb34e774740d68f901fd236f39 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 190 207 2.7E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_09740 e60d3aeb34e774740d68f901fd236f39 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 188 2.7E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_09740 e60d3aeb34e774740d68f901fd236f39 279 PIRSF PIRSF000094 12 270 9.3E-112 T 11-10-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DB34_07650 a14a3302bdcc2778ae3d1bda5635e261 456 Pfam PF00324 Amino acid permease 20 439 4.8E-83 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 DB34_07650 a14a3302bdcc2778ae3d1bda5635e261 456 Gene3D G3DSA:1.20.1740.10 15 455 2.3E-52 T 11-10-2018 DB34_07650 a14a3302bdcc2778ae3d1bda5635e261 456 PIRSF PIRSF006060 4 455 3.9E-52 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DB34_07650 a14a3302bdcc2778ae3d1bda5635e261 456 ProSitePatterns PS00218 Amino acid permeases signature. 45 75 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 DB34_03315 ee5910306dea7d395c975a75247e544c 213 Gene3D G3DSA:1.10.10.60 14 69 3.5E-22 T 11-10-2018 DB34_03315 ee5910306dea7d395c975a75247e544c 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 25 70 1.1E-19 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB34_03315 ee5910306dea7d395c975a75247e544c 213 SUPERFAMILY SSF48498 91 183 1.48E-10 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DB34_03315 ee5910306dea7d395c975a75247e544c 213 ProSitePatterns PS01081 TetR-type HTH domain signature. 37 67 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DB34_03315 ee5910306dea7d395c975a75247e544c 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 46 69 8.6E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB34_03315 ee5910306dea7d395c975a75247e544c 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 25 38 8.6E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB34_03315 ee5910306dea7d395c975a75247e544c 213 Gene3D G3DSA:1.10.357.10 78 212 7.6E-36 T 11-10-2018 DB34_03315 ee5910306dea7d395c975a75247e544c 213 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 157 211 1.0E-12 T 11-10-2018 IPR039536 Transcriptional regulator TetR, C-terminal, Proteobacteria type DB34_03315 ee5910306dea7d395c975a75247e544c 213 SUPERFAMILY SSF46689 17 95 8.75E-21 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB34_08855 9719a5ba2d1ccc1fc58f6d8a6c07da3e 201 Gene3D G3DSA:3.10.540.10 5 84 1.8E-14 T 11-10-2018 DB34_08855 9719a5ba2d1ccc1fc58f6d8a6c07da3e 201 Pfam PF06938 Protein of unknown function (DUF1285) 35 188 1.0E-47 T 11-10-2018 IPR010707 Protein of unknown function DUF1285 DB34_08855 9719a5ba2d1ccc1fc58f6d8a6c07da3e 201 Gene3D G3DSA:2.30.270.10 85 164 3.2E-20 T 11-10-2018 IPR023361 DUF1285, beta-roll domain superfamily DB34_02480 596265fc42f824b503cd0812f0494d40 140 Pfam PF10116 Protein required for attachment to host cells 42 128 6.7E-15 T 11-10-2018 IPR019291 Host attachment protein DB34_11780 9763eab2db6162687570a27dcaa683fb 276 Gene3D G3DSA:3.90.730.10 34 260 8.2E-48 T 11-10-2018 IPR036430 Ribonuclease T2-like superfamily GO:0003723|GO:0033897 Reactome: R-HSA-6798695 DB34_11780 9763eab2db6162687570a27dcaa683fb 276 SUPERFAMILY SSF55895 43 257 9.55E-24 T 11-10-2018 IPR036430 Ribonuclease T2-like superfamily GO:0003723|GO:0033897 Reactome: R-HSA-6798695 DB34_11780 9763eab2db6162687570a27dcaa683fb 276 Pfam PF00445 Ribonuclease T2 family 47 230 3.7E-11 T 11-10-2018 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 Reactome: R-HSA-6798695 DB34_12260 15751725a6c4da244d161e5073ae6b02 415 Pfam PF02687 FtsX-like permease family 302 408 1.1E-11 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 DB34_12260 15751725a6c4da244d161e5073ae6b02 415 Pfam PF12704 MacB-like periplasmic core domain 29 242 6.0E-16 T 11-10-2018 IPR025857 MacB-like periplasmic core domain DB34_12260 15751725a6c4da244d161e5073ae6b02 415 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 415 1.2E-140 T 11-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 DB34_03670 7ce1848517ae81bd81b4ce5a5b735213 209 Pfam PF06271 RDD family 31 191 1.5E-28 T 11-10-2018 IPR010432 RDD DB34_03745 8cc97f486b0bd6c5c46568c00a70fbbe 319 Pfam PF05045 Rhamnan synthesis protein F 83 276 3.5E-7 T 11-10-2018 IPR007739 Rhamnan synthesis F DB34_00815 86266ca61b05bb2bdab3de76c0a691be 645 SUPERFAMILY SSF55486 59 631 1.74E-117 T 11-10-2018 DB34_00815 86266ca61b05bb2bdab3de76c0a691be 645 Gene3D G3DSA:1.20.140.70 78 223 7.6E-19 T 11-10-2018 DB34_00815 86266ca61b05bb2bdab3de76c0a691be 645 Pfam PF08439 Oligopeptidase F 169 236 6.8E-19 T 11-10-2018 IPR013647 Oligopeptidase F, N-terminal domain DB34_00815 86266ca61b05bb2bdab3de76c0a691be 645 TIGRFAM TIGR02290 M3_fam_3: oligoendopeptidase, pepF/M3 family 66 644 8.1E-192 T 11-10-2018 IPR011977 Peptidase M3B, oligoendopeptidase-related clade 3 DB34_00815 86266ca61b05bb2bdab3de76c0a691be 645 Gene3D G3DSA:1.10.1370.20 277 645 3.9E-112 T 11-10-2018 DB34_00815 86266ca61b05bb2bdab3de76c0a691be 645 Pfam PF01432 Peptidase family M3 254 630 6.5E-35 T 11-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 DB34_13005 15f8b591fa2d3fc7be1d1aaa37435a1e 289 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 223 251 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 DB34_13005 15f8b591fa2d3fc7be1d1aaa37435a1e 289 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 215 247 4.7E-8 T 11-10-2018 IPR001451 Hexapeptide repeat DB34_13005 15f8b591fa2d3fc7be1d1aaa37435a1e 289 Gene3D G3DSA:1.10.3130.10 15 163 2.0E-44 T 11-10-2018 DB34_13005 15f8b591fa2d3fc7be1d1aaa37435a1e 289 Pfam PF06426 Serine acetyltransferase, N-terminal 32 134 4.4E-29 T 11-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 DB34_13005 15f8b591fa2d3fc7be1d1aaa37435a1e 289 SMART SM00971 32 134 9.6E-40 T 11-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 DB34_13005 15f8b591fa2d3fc7be1d1aaa37435a1e 289 Gene3D G3DSA:2.160.10.10 164 283 1.7E-36 T 11-10-2018 DB34_13005 15f8b591fa2d3fc7be1d1aaa37435a1e 289 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 104 263 6.9E-69 T 11-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 DB34_13005 15f8b591fa2d3fc7be1d1aaa37435a1e 289 SUPERFAMILY SSF51161 58 268 2.22E-57 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily DB34_13005 15f8b591fa2d3fc7be1d1aaa37435a1e 289 PIRSF PIRSF000441 97 282 4.2E-57 T 11-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 DB34_00535 1c1b0e8fcd86b2d0267d5a1d11141e2b 172 SUPERFAMILY SSF55021 87 169 4.58E-24 T 11-10-2018 DB34_00535 1c1b0e8fcd86b2d0267d5a1d11141e2b 172 SUPERFAMILY SSF55021 10 83 5.15E-14 T 11-10-2018 DB34_00535 1c1b0e8fcd86b2d0267d5a1d11141e2b 172 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 11 83 3.0E-21 T 11-10-2018 DB34_00535 1c1b0e8fcd86b2d0267d5a1d11141e2b 172 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 9 166 2.1E-44 T 11-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 DB34_00535 1c1b0e8fcd86b2d0267d5a1d11141e2b 172 Gene3D G3DSA:3.30.70.260 7 86 1.8E-24 T 11-10-2018 DB34_00535 1c1b0e8fcd86b2d0267d5a1d11141e2b 172 Pfam PF10369 Small subunit of acetolactate synthase 92 165 4.6E-24 T 11-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 DB34_00535 1c1b0e8fcd86b2d0267d5a1d11141e2b 172 Pfam PF13710 ACT domain 18 80 4.1E-9 T 11-10-2018 DB34_00535 1c1b0e8fcd86b2d0267d5a1d11141e2b 172 Gene3D G3DSA:3.30.70.1150 91 171 6.3E-25 T 11-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal DB34_07695 7e6aef7fd05b555a462f3cd0c7543aaf 324 Gene3D G3DSA:3.40.50.150 144 307 1.3E-39 T 11-10-2018 DB34_07695 7e6aef7fd05b555a462f3cd0c7543aaf 324 Pfam PF01728 FtsJ-like methyltransferase 152 229 2.0E-6 T 11-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 DB34_07695 7e6aef7fd05b555a462f3cd0c7543aaf 324 SUPERFAMILY SSF53335 151 247 3.13E-13 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB34_01515 1da14366fe0b0ad30e5d611dd30f2663 812 SUPERFAMILY SSF50998 174 794 1.83E-129 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily DB34_01515 1da14366fe0b0ad30e5d611dd30f2663 812 Gene3D G3DSA:2.140.10.10 162 558 7.6E-112 T 11-10-2018 DB34_01515 1da14366fe0b0ad30e5d611dd30f2663 812 Pfam PF13360 PQQ-like domain 227 517 6.7E-11 T 11-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat DB34_01515 1da14366fe0b0ad30e5d611dd30f2663 812 Pfam PF13360 PQQ-like domain 683 774 9.7E-6 T 11-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat DB34_01515 1da14366fe0b0ad30e5d611dd30f2663 812 TIGRFAM TIGR03074 PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 22 806 1.0E-271 T 11-10-2018 IPR017511 PQQ-dependent membrane bound dehydrogenase GO:0016021|GO:0016614|GO:0048038|GO:0055114 DB34_01515 1da14366fe0b0ad30e5d611dd30f2663 812 Gene3D G3DSA:2.140.10.10 573 807 7.3E-34 T 11-10-2018 DB34_01515 1da14366fe0b0ad30e5d611dd30f2663 812 SMART SM00564 728 761 0.0015 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat DB34_01515 1da14366fe0b0ad30e5d611dd30f2663 812 SMART SM00564 419 468 48.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat DB34_01515 1da14366fe0b0ad30e5d611dd30f2663 812 SMART SM00564 350 390 78.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat DB34_01515 1da14366fe0b0ad30e5d611dd30f2663 812 SMART SM00564 226 258 4.4 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat DB34_01515 1da14366fe0b0ad30e5d611dd30f2663 812 SMART SM00564 667 700 200.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat DB34_13255 4e283a40fde51431cbe39c3287d1e150 203 Pfam PF11363 Protein of unknown function (DUF3164) 8 202 2.8E-68 T 11-10-2018 IPR021505 Bacteriophage B3, Orf6 DB34_12330 9b16304fc8aa30f7b0c323f650cfaaee 426 SUPERFAMILY SSF56762 52 426 3.4E-134 T 11-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_12330 9b16304fc8aa30f7b0c323f650cfaaee 426 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 44 426 8.9E-175 T 11-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_12330 9b16304fc8aa30f7b0c323f650cfaaee 426 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 156 426 9.8E-121 T 11-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_12330 9b16304fc8aa30f7b0c323f650cfaaee 426 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 79 90 - T 11-10-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_12330 9b16304fc8aa30f7b0c323f650cfaaee 426 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 31 426 48.416 T 11-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_12330 9b16304fc8aa30f7b0c323f650cfaaee 426 Gene3D G3DSA:1.10.645.20 40 426 8.8E-173 T 11-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_08685 32408310b5aae549b3abf3e97988a6d3 122 Gene3D G3DSA:2.40.150.20 1 122 5.2E-55 T 11-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 DB34_08685 32408310b5aae549b3abf3e97988a6d3 122 SUPERFAMILY SSF50193 1 122 3.53E-51 T 11-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 DB34_08685 32408310b5aae549b3abf3e97988a6d3 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 1.9E-57 T 11-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 DB34_08685 32408310b5aae549b3abf3e97988a6d3 122 SMART SM01374 1 122 3.2E-85 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 DB34_08685 32408310b5aae549b3abf3e97988a6d3 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 1.5E-55 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 DB34_08685 32408310b5aae549b3abf3e97988a6d3 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 27.269 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 DB34_08685 32408310b5aae549b3abf3e97988a6d3 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 11-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_12475 3745eba32fb08d2d7f5e7265a705be95 101 Pfam PF00830 Ribosomal L28 family 3 61 2.1E-25 T 11-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_12475 3745eba32fb08d2d7f5e7265a705be95 101 Gene3D G3DSA:2.30.170.40 2 77 3.3E-28 T 11-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_12475 3745eba32fb08d2d7f5e7265a705be95 101 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 1.3E-24 T 11-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_12475 3745eba32fb08d2d7f5e7265a705be95 101 SUPERFAMILY SSF143800 1 77 6.47E-28 T 11-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB34_12475 3745eba32fb08d2d7f5e7265a705be95 101 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 68 21.453 T 11-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB34_09565 290282dfba13ad6bc876e56390381ca4 296 Pfam PF00483 Nucleotidyl transferase 10 246 8.3E-24 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 DB34_09565 290282dfba13ad6bc876e56390381ca4 296 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 7 270 1.2E-102 T 11-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 DB34_09565 290282dfba13ad6bc876e56390381ca4 296 Gene3D G3DSA:3.90.550.10 2 294 3.1E-85 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB34_09565 290282dfba13ad6bc876e56390381ca4 296 SUPERFAMILY SSF53448 8 281 1.6E-61 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB34_02745 3331e97b8b9bfe394bf504815b5a4571 195 Gene3D G3DSA:1.20.120.20 33 188 2.4E-7 T 11-10-2018 DB34_02745 3331e97b8b9bfe394bf504815b5a4571 195 SUPERFAMILY SSF58113 38 183 6.54E-5 T 11-10-2018 DB34_01815 d96d8866d4ea29303132df5d269983c2 224 Pfam PF12318 Membrane bound FAD containing D-sorbitol dehydrogenase 45 202 7.1E-50 T 11-10-2018 IPR024651 FAD-containing D-sorbitol dehydrogenase small subunit DB34_00205 d2251194747c37d95e9bfd63cb24456b 438 Pfam PF07642 Putative beta-barrel porin-2, OmpL-like. bbp2 52 438 4.9E-52 T 11-10-2018 IPR011486 Putative beta-barrel porin-2, OmpL-like. bbp2 DB34_13360 9e4bcfcd931a4deec9a7fe409084951a 67 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 8 57 4.0E-12 T 11-10-2018 IPR010260 DNA-binding transcriptional activator AlpA DB34_13360 9e4bcfcd931a4deec9a7fe409084951a 67 SUPERFAMILY SSF46955 8 60 2.38E-8 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily DB34_09495 1a41cfe3f4e079ef75f5a155ac0419dd 201 Gene3D G3DSA:3.20.20.70 3 201 7.5E-54 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB34_09495 1a41cfe3f4e079ef75f5a155ac0419dd 201 Pfam PF02581 Thiamine monophosphate synthase 14 181 4.7E-46 T 11-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DB34_09495 1a41cfe3f4e079ef75f5a155ac0419dd 201 SUPERFAMILY SSF51391 6 198 9.02E-59 T 11-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DB34_06965 4b6473a359ebbaba156365e8fc8dc16c 157 SUPERFAMILY SSF46785 2 138 1.68E-36 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB34_06965 4b6473a359ebbaba156365e8fc8dc16c 157 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 136 5.4E-34 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type DB34_06965 4b6473a359ebbaba156365e8fc8dc16c 157 Gene3D G3DSA:1.10.10.10 1 149 1.5E-38 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB34_06965 4b6473a359ebbaba156365e8fc8dc16c 157 Pfam PF02082 Transcriptional regulator 1 81 1.1E-24 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type DB34_12575 7dffeb3117e03f346acaa8f36a4570f4 171 SMART SM00344 14 123 3.4E-39 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 DB34_12575 7dffeb3117e03f346acaa8f36a4570f4 171 Gene3D G3DSA:3.30.70.920 69 148 1.0E-16 T 11-10-2018 DB34_12575 7dffeb3117e03f346acaa8f36a4570f4 171 SUPERFAMILY SSF54909 74 161 1.61E-13 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel DB34_12575 7dffeb3117e03f346acaa8f36a4570f4 171 SUPERFAMILY SSF46785 14 74 1.24E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB34_12575 7dffeb3117e03f346acaa8f36a4570f4 171 Pfam PF01037 Lrp/AsnC ligand binding domain 81 149 4.0E-13 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DB34_12575 7dffeb3117e03f346acaa8f36a4570f4 171 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 41 2.4E-16 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DB34_12575 7dffeb3117e03f346acaa8f36a4570f4 171 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 41 60 2.4E-16 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DB34_12575 7dffeb3117e03f346acaa8f36a4570f4 171 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 14 30 2.4E-16 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DB34_12575 7dffeb3117e03f346acaa8f36a4570f4 171 Gene3D G3DSA:1.10.10.10 5 68 3.1E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB34_12575 7dffeb3117e03f346acaa8f36a4570f4 171 Pfam PF13404 AsnC-type helix-turn-helix domain 14 55 6.6E-18 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DB34_09520 09af076bdef04538df1fdf7f8a1db850 321 PIRSF PIRSF026166 1 320 9.1E-119 T 11-10-2018 IPR016833 Putative sodium bile acid cotransporter DB34_09520 09af076bdef04538df1fdf7f8a1db850 321 Gene3D G3DSA:1.20.1530.20 1 311 3.5E-30 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily DB34_09520 09af076bdef04538df1fdf7f8a1db850 321 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 2 303 4.5E-91 T 11-10-2018 IPR016833 Putative sodium bile acid cotransporter DB34_04310 04c2894eec5007b3a7647360fd3b7c58 572 SMART SM00316 115 183 1.2E-4 T 11-10-2018 IPR022967 RNA-binding domain, S1 DB34_04310 04c2894eec5007b3a7647360fd3b7c58 572 SMART SM00316 461 532 6.7E-16 T 11-10-2018 IPR022967 RNA-binding domain, S1 DB34_04310 04c2894eec5007b3a7647360fd3b7c58 572 SMART SM00316 31 99 7.1E-12 T 11-10-2018 IPR022967 RNA-binding domain, S1 DB34_04310 04c2894eec5007b3a7647360fd3b7c58 572 SMART SM00316 202 272 2.1E-27 T 11-10-2018 IPR022967 RNA-binding domain, S1 DB34_04310 04c2894eec5007b3a7647360fd3b7c58 572 SMART SM00316 374 446 1.3E-21 T 11-10-2018 IPR022967 RNA-binding domain, S1 DB34_04310 04c2894eec5007b3a7647360fd3b7c58 572 SMART SM00316 287 359 9.4E-25 T 11-10-2018 IPR022967 RNA-binding domain, S1 DB34_04310 04c2894eec5007b3a7647360fd3b7c58 572 Gene3D G3DSA:2.40.50.140 370 453 1.6E-25 T 11-10-2018 DB34_04310 04c2894eec5007b3a7647360fd3b7c58 572 Gene3D G3DSA:2.40.50.140 281 369 6.3E-29 T 11-10-2018 DB34_04310 04c2894eec5007b3a7647360fd3b7c58 572 PIRSF PIRSF002111 1 546 3.0E-202 T 11-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 DB34_04310 04c2894eec5007b3a7647360fd3b7c58 572 Gene3D G3DSA:2.40.50.140 199 280 1.6E-27 T 11-10-2018 DB34_04310 04c2894eec5007b3a7647360fd3b7c58 572 SUPERFAMILY SSF50249 444 546 4.85E-17 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB34_04310 04c2894eec5007b3a7647360fd3b7c58 572 Gene3D G3DSA:2.40.50.140 30 112 5.8E-17 T 11-10-2018 DB34_04310 04c2894eec5007b3a7647360fd3b7c58 572 SUPERFAMILY SSF50249 267 373 5.0E-27 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB34_04310 04c2894eec5007b3a7647360fd3b7c58 572 SUPERFAMILY SSF50249 202 287 1.96E-25 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB34_04310 04c2894eec5007b3a7647360fd3b7c58 572 SUPERFAMILY SSF50249 354 459 2.31E-24 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB34_04310 04c2894eec5007b3a7647360fd3b7c58 572 Gene3D G3DSA:2.40.50.140 454 535 2.5E-15 T 11-10-2018 DB34_04310 04c2894eec5007b3a7647360fd3b7c58 572 PRINTS PR00681 Ribosomal protein S1 signature 138 155 3.1E-83 T 11-10-2018 DB34_04310 04c2894eec5007b3a7647360fd3b7c58 572 PRINTS PR00681 Ribosomal protein S1 signature 167 187 3.1E-83 T 11-10-2018 DB34_04310 04c2894eec5007b3a7647360fd3b7c58 572 PRINTS PR00681 Ribosomal protein S1 signature 120 136 3.1E-83 T 11-10-2018 DB34_04310 04c2894eec5007b3a7647360fd3b7c58 572 PRINTS PR00681 Ribosomal protein S1 signature 96 115 3.1E-83 T 11-10-2018 DB34_04310 04c2894eec5007b3a7647360fd3b7c58 572 PRINTS PR00681 Ribosomal protein S1 signature 302 321 3.1E-83 T 11-10-2018 DB34_04310 04c2894eec5007b3a7647360fd3b7c58 572 PRINTS PR00681 Ribosomal protein S1 signature 224 245 3.1E-83 T 11-10-2018 DB34_04310 04c2894eec5007b3a7647360fd3b7c58 572 PRINTS PR00681 Ribosomal protein S1 signature 33 51 3.1E-83 T 11-10-2018 DB34_04310 04c2894eec5007b3a7647360fd3b7c58 572 PRINTS PR00681 Ribosomal protein S1 signature 342 360 3.1E-83 T 11-10-2018 DB34_04310 04c2894eec5007b3a7647360fd3b7c58 572 PRINTS PR00681 Ribosomal protein S1 signature 51 65 3.1E-83 T 11-10-2018 DB34_04310 04c2894eec5007b3a7647360fd3b7c58 572 Pfam PF00575 S1 RNA binding domain 460 532 1.7E-12 T 11-10-2018 IPR003029 S1 domain GO:0003676 DB34_04310 04c2894eec5007b3a7647360fd3b7c58 572 Pfam PF00575 S1 RNA binding domain 372 446 6.6E-18 T 11-10-2018 IPR003029 S1 domain GO:0003676 DB34_04310 04c2894eec5007b3a7647360fd3b7c58 572 Pfam PF00575 S1 RNA binding domain 287 359 5.0E-20 T 11-10-2018 IPR003029 S1 domain GO:0003676 DB34_04310 04c2894eec5007b3a7647360fd3b7c58 572 Pfam PF00575 S1 RNA binding domain 203 272 3.7E-19 T 11-10-2018 IPR003029 S1 domain GO:0003676 DB34_04310 04c2894eec5007b3a7647360fd3b7c58 572 Pfam PF00575 S1 RNA binding domain 115 183 9.7E-10 T 11-10-2018 IPR003029 S1 domain GO:0003676 DB34_04310 04c2894eec5007b3a7647360fd3b7c58 572 Pfam PF00575 S1 RNA binding domain 32 98 1.4E-6 T 11-10-2018 IPR003029 S1 domain GO:0003676 DB34_04310 04c2894eec5007b3a7647360fd3b7c58 572 SUPERFAMILY SSF50249 23 124 2.57E-19 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB34_04310 04c2894eec5007b3a7647360fd3b7c58 572 SUPERFAMILY SSF50249 115 197 1.81E-12 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB34_04310 04c2894eec5007b3a7647360fd3b7c58 572 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 15 532 2.3E-198 T 11-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 DB34_00640 2b324c1d0a41904203d4c8c8d358aabf 266 Gene3D G3DSA:3.20.10.10 118 266 8.7E-34 T 11-10-2018 DB34_00640 2b324c1d0a41904203d4c8c8d358aabf 266 Gene3D G3DSA:3.30.470.10 1 116 1.7E-35 T 11-10-2018 DB34_00640 2b324c1d0a41904203d4c8c8d358aabf 266 SUPERFAMILY SSF56752 3 265 5.23E-64 T 11-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 DB34_00640 2b324c1d0a41904203d4c8c8d358aabf 266 Pfam PF01063 Amino-transferase class IV 30 238 7.4E-45 T 11-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 DB34_09200 b98a32b5929d17cbffdb4de04010219f 306 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 12 297 26.586 T 11-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 DB34_09200 b98a32b5929d17cbffdb4de04010219f 306 Gene3D G3DSA:3.40.50.150 99 299 5.9E-53 T 11-10-2018 DB34_09200 b98a32b5929d17cbffdb4de04010219f 306 SUPERFAMILY SSF53335 97 296 2.39E-37 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB34_09200 b98a32b5929d17cbffdb4de04010219f 306 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 53 297 1.8E-56 T 11-10-2018 DB34_02775 22ad9ba279f55c176b0cfa497ae52193 238 Pfam PF01895 PhoU domain 126 211 3.3E-20 T 11-10-2018 IPR026022 PhoU domain DB34_02775 22ad9ba279f55c176b0cfa497ae52193 238 Pfam PF01895 PhoU domain 24 110 1.7E-18 T 11-10-2018 IPR026022 PhoU domain DB34_02775 22ad9ba279f55c176b0cfa497ae52193 238 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 11 218 4.4E-68 T 11-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 DB34_02775 22ad9ba279f55c176b0cfa497ae52193 238 PIRSF PIRSF003107 6 223 3.7E-63 T 11-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 DB34_02775 22ad9ba279f55c176b0cfa497ae52193 238 Gene3D G3DSA:1.20.58.220 120 226 1.8E-37 T 11-10-2018 IPR038078 PhoU-like domain superfamily DB34_02775 22ad9ba279f55c176b0cfa497ae52193 238 SUPERFAMILY SSF109755 10 224 4.81E-68 T 11-10-2018 DB34_02775 22ad9ba279f55c176b0cfa497ae52193 238 Gene3D G3DSA:1.20.58.220 2 116 1.1E-34 T 11-10-2018 IPR038078 PhoU-like domain superfamily DB34_03520 0c00e125764b128ecb343a67b88fb674 385 PIRSF PIRSF005572 12 377 1.9E-107 T 11-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 DB34_03520 0c00e125764b128ecb343a67b88fb674 385 Gene3D G3DSA:3.40.640.10 71 240 5.8E-106 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB34_03520 0c00e125764b128ecb343a67b88fb674 385 SUPERFAMILY SSF53383 5 366 3.99E-82 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB34_03520 0c00e125764b128ecb343a67b88fb674 385 Gene3D G3DSA:1.10.260.50 26 279 5.8E-106 T 11-10-2018 DB34_03520 0c00e125764b128ecb343a67b88fb674 385 Gene3D G3DSA:3.90.1150.10 15 366 5.8E-106 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB34_03520 0c00e125764b128ecb343a67b88fb674 385 Pfam PF00266 Aminotransferase class-V 15 364 1.3E-56 T 11-10-2018 IPR000192 Aminotransferase class V domain DB34_03520 0c00e125764b128ecb343a67b88fb674 385 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 315 331 - T 11-10-2018 IPR018201 Beta-ketoacyl synthase, active site DB34_11100 8993814cca7af5e56cf14749e33d21ea 209 Pfam PF12804 MobA-like NTP transferase domain 5 141 2.2E-21 T 11-10-2018 IPR025877 MobA-like NTP transferase DB34_11100 8993814cca7af5e56cf14749e33d21ea 209 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 1 192 21.984 T 11-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 DB34_11100 8993814cca7af5e56cf14749e33d21ea 209 SUPERFAMILY SSF53448 1 189 2.69E-19 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB34_11100 8993814cca7af5e56cf14749e33d21ea 209 Gene3D G3DSA:3.90.550.10 1 199 1.0E-35 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB34_09655 5590b27c78aa8df45bf43d77ed50b835 143 Pfam PF13763 Domain of unknown function (DUF4167) 20 90 5.9E-32 T 11-10-2018 IPR025430 Domain of unknown function DUF4167 DB34_04240 b919e6e644448653e1dce0cb0057c8d8 514 PIRSF PIRSF006281 10 514 4.3E-179 T 11-10-2018 IPR014438 Glucan biosynthesis protein MdoG/MdoD DB34_04240 b919e6e644448653e1dce0cb0057c8d8 514 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 42 512 2.5E-189 T 11-10-2018 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 DB34_04240 b919e6e644448653e1dce0cb0057c8d8 514 SUPERFAMILY SSF81296 413 514 2.24E-23 T 11-10-2018 IPR014756 Immunoglobulin E-set DB34_04240 b919e6e644448653e1dce0cb0057c8d8 514 SUPERFAMILY SSF74650 42 412 1.22E-151 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 DB34_04240 b919e6e644448653e1dce0cb0057c8d8 514 Gene3D G3DSA:2.70.98.10 41 410 1.2E-153 T 11-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 DB34_04240 b919e6e644448653e1dce0cb0057c8d8 514 Gene3D G3DSA:2.60.40.10 415 514 3.2E-16 T 11-10-2018 IPR013783 Immunoglobulin-like fold DB34_03680 3c84b06ae58c68f898fea2ad4a917ce3 250 Gene3D G3DSA:2.60.120.620 10 250 3.5E-89 T 11-10-2018 DB34_03680 3c84b06ae58c68f898fea2ad4a917ce3 250 Pfam PF10014 2OG-Fe dioxygenase 52 246 3.6E-67 T 11-10-2018 IPR018724 2OG-Fe dioxygenase DB34_13170 670283aabbc26dcbe7aeb396457ee1e4 136 Pfam PF10618 Phage tail tube protein 10 131 2.5E-23 T 11-10-2018 IPR019596 Bacteriophage Mu, GpM, tail tube DB34_08860 9dcafb2ad1fd3113356a90cc6272004d 397 SUPERFAMILY SSF81891 147 391 9.03E-46 T 11-10-2018 DB34_08860 9dcafb2ad1fd3113356a90cc6272004d 397 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 183 236 1.5E-10 T 11-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 DB34_08860 9dcafb2ad1fd3113356a90cc6272004d 397 Gene3D G3DSA:3.30.460.10 9 145 2.2E-38 T 11-10-2018 DB34_08860 9dcafb2ad1fd3113356a90cc6272004d 397 Pfam PF01743 Poly A polymerase head domain 27 149 1.5E-28 T 11-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 DB34_08860 9dcafb2ad1fd3113356a90cc6272004d 397 SUPERFAMILY SSF81301 17 145 1.31E-36 T 11-10-2018 DB34_08860 9dcafb2ad1fd3113356a90cc6272004d 397 Gene3D G3DSA:1.10.3090.10 147 316 1.9E-35 T 11-10-2018 DB34_01520 7336b7eafaff16b7e7b8d60e06e77050 113 Pfam PF13586 Transposase DDE domain 29 112 5.6E-21 T 11-10-2018 IPR025668 Transposase DDE domain DB34_04150 1770ae6d6fc8af359f9e7369a1d4c321 383 SUPERFAMILY SSF51735 141 318 1.61E-32 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily DB34_04150 1770ae6d6fc8af359f9e7369a1d4c321 383 SUPERFAMILY SSF52283 4 172 9.35E-40 T 11-10-2018 DB34_04150 1770ae6d6fc8af359f9e7369a1d4c321 383 Gene3D G3DSA:3.40.50.720 5 363 1.2E-122 T 11-10-2018 DB34_04150 1770ae6d6fc8af359f9e7369a1d4c321 383 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 145 367 1.7E-58 T 11-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain DB34_04150 1770ae6d6fc8af359f9e7369a1d4c321 383 Gene3D G3DSA:3.40.50.720 141 319 1.2E-122 T 11-10-2018 DB34_04150 1770ae6d6fc8af359f9e7369a1d4c321 383 SMART SM01002 150 312 2.5E-60 T 11-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain DB34_04150 1770ae6d6fc8af359f9e7369a1d4c321 383 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 7 141 3.2E-38 T 11-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal DB34_04150 1770ae6d6fc8af359f9e7369a1d4c321 383 SMART SM01003 6 141 5.2E-50 T 11-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal DB34_06705 3ab09f0427c23fec4a06a566db4d784b 218 PIRSF PIRSF006324 1 218 2.0E-58 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DB34_06705 3ab09f0427c23fec4a06a566db4d784b 218 Pfam PF01810 LysE type translocator 15 215 9.2E-33 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DB34_09485 be5e38643189d2e8f7a76d0ef3fed74e 65 Pfam PF02597 ThiS family 6 65 3.4E-13 T 11-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 DB34_09485 be5e38643189d2e8f7a76d0ef3fed74e 65 SUPERFAMILY SSF54285 2 64 1.19E-15 T 11-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp DB34_09485 be5e38643189d2e8f7a76d0ef3fed74e 65 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 65 5.3E-18 T 11-10-2018 IPR010035 ThiS, thiamine-biosynthesis DB34_09485 be5e38643189d2e8f7a76d0ef3fed74e 65 Gene3D G3DSA:3.10.20.30 1 65 5.3E-21 T 11-10-2018 IPR012675 Beta-grasp domain superfamily DB34_10365 985b6296e3fa75d52263c0eff3641da7 255 Gene3D G3DSA:1.10.3720.10 48 248 4.3E-23 T 11-10-2018 IPR035906 MetI-like superfamily DB34_10365 985b6296e3fa75d52263c0eff3641da7 255 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 72 247 3.1E-23 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB34_10365 985b6296e3fa75d52263c0eff3641da7 255 SUPERFAMILY SSF161098 53 236 4.45E-27 T 11-10-2018 IPR035906 MetI-like superfamily DB34_09365 1a9097f9a847e7fda7f61f3d22f177fe 168 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 24 162 19.71 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 DB34_09365 1a9097f9a847e7fda7f61f3d22f177fe 168 SUPERFAMILY SSF55486 44 166 9.03E-35 T 11-10-2018 DB34_09365 1a9097f9a847e7fda7f61f3d22f177fe 168 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 62 158 2.6E-25 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 DB34_09365 1a9097f9a847e7fda7f61f3d22f177fe 168 Pfam PF02130 Uncharacterized protein family UPF0054 61 158 3.0E-27 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 DB34_09365 1a9097f9a847e7fda7f61f3d22f177fe 168 Gene3D G3DSA:3.40.390.30 30 167 4.1E-33 T 11-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 DB34_09365 1a9097f9a847e7fda7f61f3d22f177fe 168 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 128 138 - T 11-10-2018 IPR020549 Endoribonuclease YbeY, conserved site DB34_05940 dbcc80c5cc049f36a29aa61d8f4ea22c 284 SUPERFAMILY SSF52141 96 277 7.19E-34 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DB34_05940 dbcc80c5cc049f36a29aa61d8f4ea22c 284 Gene3D G3DSA:3.40.470.10 82 281 3.3E-36 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DB34_05940 dbcc80c5cc049f36a29aa61d8f4ea22c 284 SMART SM00986 122 271 1.3E-12 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DB34_05940 dbcc80c5cc049f36a29aa61d8f4ea22c 284 SMART SM00987 122 271 1.3E-12 T 11-10-2018 DB34_05940 dbcc80c5cc049f36a29aa61d8f4ea22c 284 Pfam PF03167 Uracil DNA glycosylase superfamily 123 269 3.1E-21 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DB34_10500 9ad487d008e56f9331e56bce02ddf713 483 Pfam PF02321 Outer membrane efflux protein 289 473 1.1E-18 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DB34_10500 9ad487d008e56f9331e56bce02ddf713 483 Pfam PF02321 Outer membrane efflux protein 67 265 7.5E-26 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DB34_10500 9ad487d008e56f9331e56bce02ddf713 483 SUPERFAMILY SSF56954 7 478 4.71E-88 T 11-10-2018 DB34_10500 9ad487d008e56f9331e56bce02ddf713 483 Gene3D G3DSA:2.20.200.10 104 364 2.3E-101 T 11-10-2018 DB34_10500 9ad487d008e56f9331e56bce02ddf713 483 Gene3D G3DSA:1.20.1600.10 57 476 2.3E-101 T 11-10-2018 DB34_10500 9ad487d008e56f9331e56bce02ddf713 483 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 19 475 2.6E-72 T 11-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 DB34_12595 f5d11bba28bc80c4cb33cba560122017 104 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 1.7E-15 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DB34_12595 f5d11bba28bc80c4cb33cba560122017 104 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 1.7E-15 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DB34_12595 f5d11bba28bc80c4cb33cba560122017 104 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 1.7E-15 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DB34_12595 f5d11bba28bc80c4cb33cba560122017 104 SMART SM00411 1 91 3.1E-31 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DB34_12595 f5d11bba28bc80c4cb33cba560122017 104 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 93 7.9E-36 T 11-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 DB34_12595 f5d11bba28bc80c4cb33cba560122017 104 Gene3D G3DSA:4.10.520.10 1 93 9.6E-29 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 DB34_12595 f5d11bba28bc80c4cb33cba560122017 104 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 11-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 DB34_12595 f5d11bba28bc80c4cb33cba560122017 104 Pfam PF00216 Bacterial DNA-binding protein 1 91 1.4E-27 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DB34_12595 f5d11bba28bc80c4cb33cba560122017 104 SUPERFAMILY SSF47729 1 92 5.74E-27 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 DB34_07375 2f935992915be9ffcc902de04e64c9db 173 Pfam PF01765 Ribosome recycling factor 8 170 3.4E-58 T 11-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 DB34_07375 2f935992915be9ffcc902de04e64c9db 173 Gene3D G3DSA:3.30.1360.40 19 93 7.8E-65 T 11-10-2018 DB34_07375 2f935992915be9ffcc902de04e64c9db 173 TIGRFAM TIGR00496 frr: ribosome recycling factor 1 173 1.8E-59 T 11-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 DB34_07375 2f935992915be9ffcc902de04e64c9db 173 Hamap MF_00040 Ribosome-recycling factor [frr]. 1 173 22.681 T 11-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 DB34_07375 2f935992915be9ffcc902de04e64c9db 173 SUPERFAMILY SSF55194 1 170 3.4E-62 T 11-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 DB34_07375 2f935992915be9ffcc902de04e64c9db 173 Gene3D G3DSA:1.10.132.20 1 170 7.8E-65 T 11-10-2018 DB34_11635 f70532bba81537e43f4f3cc9d548fad4 157 SUPERFAMILY SSF47413 30 93 2.44E-7 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DB34_13175 6c699a81e51ba1e616d642cc08c784f5 491 PIRSF PIRSF007349 1 490 9.0E-155 T 11-10-2018 IPR007067 Tail sheath protein DB34_01260 d02d33699c319abf5f40700dcf2a7f1b 139 Gene3D G3DSA:3.90.79.10 3 136 5.6E-17 T 11-10-2018 DB34_01260 d02d33699c319abf5f40700dcf2a7f1b 139 SUPERFAMILY SSF55811 4 130 1.33E-19 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DB34_01260 d02d33699c319abf5f40700dcf2a7f1b 139 Pfam PF00293 NUDIX domain 13 113 5.3E-8 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DB34_10295 024e86a5641518d14528f8efeb2c4bf4 197 SUPERFAMILY SSF88946 4 80 2.08E-15 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DB34_10295 024e86a5641518d14528f8efeb2c4bf4 197 Gene3D G3DSA:1.10.10.10 97 159 4.6E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB34_10295 024e86a5641518d14528f8efeb2c4bf4 197 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 13 154 2.6E-22 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DB34_10295 024e86a5641518d14528f8efeb2c4bf4 197 Pfam PF04542 Sigma-70 region 2 13 74 1.8E-11 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DB34_10295 024e86a5641518d14528f8efeb2c4bf4 197 Pfam PF08281 Sigma-70, region 4 100 152 1.0E-15 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DB34_10295 024e86a5641518d14528f8efeb2c4bf4 197 SUPERFAMILY SSF88659 94 153 1.68E-15 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DB34_10295 024e86a5641518d14528f8efeb2c4bf4 197 Gene3D G3DSA:1.10.1740.10 1 76 6.2E-19 T 11-10-2018 DB34_03625 9aa3737e3066ec9a4a52710b983c9c7b 239 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 18 238 36.58 T 11-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 DB34_03625 9aa3737e3066ec9a4a52710b983c9c7b 239 Pfam PF01618 MotA/TolQ/ExbB proton channel family 89 221 6.5E-36 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel DB34_03625 9aa3737e3066ec9a4a52710b983c9c7b 239 TIGRFAM TIGR02796 tolQ: protein TolQ 19 233 8.0E-80 T 11-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 DB34_09385 c4435ba66dcf72a7ee4fa84ad4ae5366 642 Pfam PF01103 Surface antigen 331 642 1.3E-34 T 11-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 DB34_09385 c4435ba66dcf72a7ee4fa84ad4ae5366 642 Pfam PF07244 Surface antigen variable number repeat 232 303 3.0E-9 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 DB34_09385 c4435ba66dcf72a7ee4fa84ad4ae5366 642 Gene3D G3DSA:2.40.160.50 308 641 8.1E-63 T 11-10-2018 DB34_09385 c4435ba66dcf72a7ee4fa84ad4ae5366 642 Gene3D G3DSA:3.10.20.310 215 307 3.0E-13 T 11-10-2018 DB34_09490 f1ce8cf3974c606fac19b568bf45ab5d 258 Gene3D G3DSA:3.20.20.70 2 258 2.6E-100 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB34_09490 f1ce8cf3974c606fac19b568bf45ab5d 258 SUPERFAMILY SSF110399 5 242 4.45E-78 T 11-10-2018 DB34_09490 f1ce8cf3974c606fac19b568bf45ab5d 258 Hamap MF_00443 Thiazole synthase [thiG]. 2 256 39.688 T 11-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 DB34_09490 f1ce8cf3974c606fac19b568bf45ab5d 258 Pfam PF05690 Thiazole biosynthesis protein ThiG 6 250 1.8E-103 T 11-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 DB34_01440 77f7780a0fed829e2289e1be91b7c1b4 387 Gene3D G3DSA:1.10.3470.10 55 386 1.3E-88 T 11-10-2018 IPR037294 ABC transporter, BtuC-like DB34_01440 77f7780a0fed829e2289e1be91b7c1b4 387 Pfam PF01032 FecCD transport family 69 382 4.5E-78 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 DB34_01440 77f7780a0fed829e2289e1be91b7c1b4 387 SUPERFAMILY SSF81345 50 382 4.05E-70 T 11-10-2018 IPR037294 ABC transporter, BtuC-like DB34_08905 536f03838c82987f3249d021fa6d91fe 398 Gene3D G3DSA:3.40.50.1100 50 146 1.1E-103 T 11-10-2018 DB34_08905 536f03838c82987f3249d021fa6d91fe 398 SUPERFAMILY SSF55021 325 381 5.89E-8 T 11-10-2018 DB34_08905 536f03838c82987f3249d021fa6d91fe 398 Gene3D G3DSA:3.40.50.1100 7 305 1.1E-103 T 11-10-2018 DB34_08905 536f03838c82987f3249d021fa6d91fe 398 SUPERFAMILY SSF53686 3 308 1.09E-86 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DB34_08905 536f03838c82987f3249d021fa6d91fe 398 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 16 301 1.8E-70 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme DB34_08905 536f03838c82987f3249d021fa6d91fe 398 TIGRFAM TIGR01127 ilvA_1Cterm: threonine ammonia-lyase 21 390 1.9E-119 T 11-10-2018 IPR005789 Threonine dehydratase, catabolic GO:0004794|GO:0006567 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 DB34_04560 96df45432d5fd87524982c200dcccbf6 220 Pfam PF09335 SNARE associated Golgi protein 35 162 1.2E-12 T 11-10-2018 IPR032816 SNARE associated Golgi protein DB34_11350 9fd891af71c22917ee4625137e33ceb5 216 Pfam PF04717 Type VI secretion system, phage-baseplate injector 20 99 1.3E-9 T 11-10-2018 IPR006531 Gp5 N-terminal DB34_11350 9fd891af71c22917ee4625137e33ceb5 216 Gene3D G3DSA:2.40.50.230 18 90 5.7E-11 T 11-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily DB34_00485 db117559b1c904acba2a1f1a8805d3d1 399 Gene3D G3DSA:3.20.20.70 120 359 4.2E-25 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB34_00485 db117559b1c904acba2a1f1a8805d3d1 399 SUPERFAMILY SSF51690 124 387 2.65E-33 T 11-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 DB34_00485 db117559b1c904acba2a1f1a8805d3d1 399 SUPERFAMILY SSF54675 19 121 1.83E-7 T 11-10-2018 DB34_10560 82c255d90565669050f826ac9d1fd49a 410 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 15 389 4.4E-101 T 11-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 DB34_10560 82c255d90565669050f826ac9d1fd49a 410 Gene3D G3DSA:1.20.1530.10 9 396 7.2E-121 T 11-10-2018 IPR023171 Na/H antiporter domain superfamily DB34_10560 82c255d90565669050f826ac9d1fd49a 410 Pfam PF06965 Na+/H+ antiporter 1 14 389 9.6E-120 T 11-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 DB34_10560 82c255d90565669050f826ac9d1fd49a 410 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 12 396 19.749 T 11-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 DB34_11995 960f150ac6ed9aabcaa9999846d6317f 249 Pfam PF02585 GlcNAc-PI de-N-acetylase 33 159 2.7E-19 T 11-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 DB34_11995 960f150ac6ed9aabcaa9999846d6317f 249 Gene3D G3DSA:3.40.50.10320 28 229 3.8E-31 T 11-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 DB34_11995 960f150ac6ed9aabcaa9999846d6317f 249 SUPERFAMILY SSF102588 32 234 1.18E-31 T 11-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 DB34_06110 960d187f89345844304ef95e3b02a734 402 Pfam PF01594 AI-2E family transporter 65 388 5.1E-48 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like DB34_01155 841c30af30fc342ae192a1b33d92c8b1 453 SUPERFAMILY SSF75304 1 451 1.13E-110 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DB34_01155 841c30af30fc342ae192a1b33d92c8b1 453 Gene3D G3DSA:3.90.1300.10 7 452 5.5E-115 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DB34_01155 841c30af30fc342ae192a1b33d92c8b1 453 Pfam PF01425 Amidase 43 440 2.6E-81 T 11-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DB34_00830 42b1edb95689b1bf7054a68dc5dbef46 317 Gene3D G3DSA:3.40.50.720 8 304 2.5E-45 T 11-10-2018 DB34_00830 42b1edb95689b1bf7054a68dc5dbef46 317 SUPERFAMILY SSF51735 4 271 7.79E-52 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily DB34_00830 42b1edb95689b1bf7054a68dc5dbef46 317 Pfam PF01370 NAD dependent epimerase/dehydratase family 8 211 5.8E-16 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 DB34_10045 e2be3cdd7c9973219349213dcc234c24 326 PIRSF PIRSF005963 6 326 9.8E-134 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 DB34_10045 e2be3cdd7c9973219349213dcc234c24 326 Pfam PF04055 Radical SAM superfamily 87 247 2.2E-11 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DB34_10045 e2be3cdd7c9973219349213dcc234c24 326 SUPERFAMILY SSF102114 46 310 1.44E-63 T 11-10-2018 DB34_10045 e2be3cdd7c9973219349213dcc234c24 326 Gene3D G3DSA:3.20.20.70 79 294 1.1E-19 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB34_10045 e2be3cdd7c9973219349213dcc234c24 326 TIGRFAM TIGR00510 lipA: lipoyl synthase 25 314 4.6E-112 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 DB34_10045 e2be3cdd7c9973219349213dcc234c24 326 Hamap MF_00206 Lipoyl synthase [lipA]. 1 319 146.406 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 DB34_10045 e2be3cdd7c9973219349213dcc234c24 326 SMART SM00729 81 294 8.0E-7 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DB34_03400 2f79081f71d1dbd8cc458b0a71a043b5 419 Pfam PF00589 Phage integrase family 242 406 1.4E-7 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 DB34_03400 2f79081f71d1dbd8cc458b0a71a043b5 419 SUPERFAMILY SSF56349 91 413 1.21E-26 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DB34_03400 2f79081f71d1dbd8cc458b0a71a043b5 419 Gene3D G3DSA:1.10.443.10 215 416 3.3E-18 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 DB34_07550 9c39993494f42fced7ace4551753e547 450 PIRSF PIRSF002744 13 450 6.5E-111 T 11-10-2018 IPR026030 Purine-cytosine permease Fcy2/21/22 GO:0005215|GO:0016021|GO:0055085 DB34_07550 9c39993494f42fced7ace4551753e547 450 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 40 381 1.3E-28 T 11-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 DB34_07550 9c39993494f42fced7ace4551753e547 450 Gene3D G3DSA:1.10.4160.10 22 386 5.8E-28 T 11-10-2018 IPR038271 Purine-cytosine permease superfamily DB34_12275 c0913e48e6512f99b39999dfe0c34888 269 Hamap MF_01274 Type III pantothenate kinase [coaX]. 1 255 35.026 T 11-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 DB34_12275 c0913e48e6512f99b39999dfe0c34888 269 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 2 250 2.3E-62 T 11-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 DB34_12275 c0913e48e6512f99b39999dfe0c34888 269 Pfam PF03309 Type III pantothenate kinase 2 208 1.3E-67 T 11-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 DB34_12275 c0913e48e6512f99b39999dfe0c34888 269 SUPERFAMILY SSF53067 2 122 9.93E-31 T 11-10-2018 DB34_12275 c0913e48e6512f99b39999dfe0c34888 269 Gene3D G3DSA:3.30.420.40 1 88 1.9E-24 T 11-10-2018 DB34_12275 c0913e48e6512f99b39999dfe0c34888 269 Gene3D G3DSA:3.30.420.40 90 263 6.1E-56 T 11-10-2018 DB34_12275 c0913e48e6512f99b39999dfe0c34888 269 SUPERFAMILY SSF53067 124 253 1.61E-37 T 11-10-2018 DB34_01590 2fe77c7e5267f1cf64d075f2458c0f21 213 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 8 206 5.3E-34 T 11-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 DB34_01590 2fe77c7e5267f1cf64d075f2458c0f21 213 SUPERFAMILY SSF51366 8 207 1.88E-48 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 DB34_01590 2fe77c7e5267f1cf64d075f2458c0f21 213 Gene3D G3DSA:3.20.20.70 5 211 7.3E-53 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB34_01590 2fe77c7e5267f1cf64d075f2458c0f21 213 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 6 210 34.283 T 11-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 DB34_01300 bcf785ae91ff13c27b72bd672b71cda2 112 Pfam PF00893 Small Multidrug Resistance protein 7 96 2.4E-25 T 11-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 DB34_01300 bcf785ae91ff13c27b72bd672b71cda2 112 Gene3D G3DSA:1.10.3730.20 4 112 4.7E-33 T 11-10-2018 DB34_01300 bcf785ae91ff13c27b72bd672b71cda2 112 SUPERFAMILY SSF103481 7 108 2.48E-19 T 11-10-2018 DB34_11785 b696263264889924e2744cc67dd10215 344 Pfam PF06516 Purine nucleoside permease (NUP) 16 342 6.9E-109 T 11-10-2018 IPR009486 Purine nucleoside permease GO:0055085 DB34_11785 b696263264889924e2744cc67dd10215 344 PIRSF PIRSF013171 3 344 5.4E-92 T 11-10-2018 IPR009486 Purine nucleoside permease GO:0055085 DB34_12815 f57de66df9ed196af8fccbdf2e5c34ed 139 SUPERFAMILY SSF141734 14 126 2.22E-48 T 11-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 DB34_12815 f57de66df9ed196af8fccbdf2e5c34ed 139 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 40 113 5.7E-35 T 11-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 DB34_12815 f57de66df9ed196af8fccbdf2e5c34ed 139 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 14 117 32.033 T 11-10-2018 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 DB34_12815 f57de66df9ed196af8fccbdf2e5c34ed 139 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 63 113 3.0E-20 T 11-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 DB34_12815 f57de66df9ed196af8fccbdf2e5c34ed 139 Gene3D G3DSA:3.10.20.400 9 104 8.1E-39 T 11-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 DB34_12925 96f384aa7f7ae6c0386e6370b355d962 383 SUPERFAMILY SSF54373 244 314 5.1E-24 T 11-10-2018 DB34_12925 96f384aa7f7ae6c0386e6370b355d962 383 Gene3D G3DSA:3.40.50.720 271 370 2.2E-14 T 11-10-2018 DB34_12925 96f384aa7f7ae6c0386e6370b355d962 383 Gene3D G3DSA:3.40.50.720 162 260 3.1E-22 T 11-10-2018 DB34_12925 96f384aa7f7ae6c0386e6370b355d962 383 TIGRFAM TIGR00031 UDP-GALP_mutase: UDP-galactopyranose mutase 3 360 4.1E-97 T 11-10-2018 IPR004379 UDP-galactopyranose mutase GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 DB34_12925 96f384aa7f7ae6c0386e6370b355d962 383 Pfam PF03275 UDP-galactopyranose mutase 147 347 1.5E-75 T 11-10-2018 IPR015899 UDP-galactopyranose mutase, C-terminal GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 DB34_12925 96f384aa7f7ae6c0386e6370b355d962 383 Gene3D G3DSA:3.40.50.720 1 137 7.0E-31 T 11-10-2018 DB34_12925 96f384aa7f7ae6c0386e6370b355d962 383 SUPERFAMILY SSF51971 3 371 2.53E-53 T 11-10-2018 DB34_12925 96f384aa7f7ae6c0386e6370b355d962 383 Pfam PF13450 NAD(P)-binding Rossmann-like domain 5 73 1.7E-19 T 11-10-2018 DB34_09665 719074c15a489c9b5edddcd8e7d17466 152 Pfam PF02470 MlaD protein 38 115 4.1E-17 T 11-10-2018 IPR003399 Mce/MlaD DB34_00370 82471c164af3d82abff33580b4d7c65c 672 SUPERFAMILY SSF56601 228 603 4.4E-77 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DB34_00370 82471c164af3d82abff33580b4d7c65c 672 SUPERFAMILY SSF56519 92 220 1.31E-33 T 11-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 DB34_00370 82471c164af3d82abff33580b4d7c65c 672 Gene3D G3DSA:3.90.1310.30 91 233 8.2E-33 T 11-10-2018 DB34_00370 82471c164af3d82abff33580b4d7c65c 672 Pfam PF03717 Penicillin-binding Protein dimerisation domain 93 217 2.4E-14 T 11-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 DB34_00370 82471c164af3d82abff33580b4d7c65c 672 Pfam PF00905 Penicillin binding protein transpeptidase domain 254 579 4.4E-47 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 DB34_13230 b3d3d6f03d223e568fdb4e50418ad0b6 672 Pfam PF05876 Phage terminase large subunit (GpA) 44 598 1.7E-172 T 11-10-2018 IPR008866 Bacteriophage lambda, GpA DB34_13230 b3d3d6f03d223e568fdb4e50418ad0b6 672 Gene3D G3DSA:3.40.50.300 31 236 1.9E-9 T 11-10-2018 DB34_12525 032e266a329e61f1805c8d331dacb792 421 SUPERFAMILY SSF63411 223 414 1.32E-49 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 DB34_12525 032e266a329e61f1805c8d331dacb792 421 Pfam PF05193 Peptidase M16 inactive domain 170 340 3.0E-40 T 11-10-2018 IPR007863 Peptidase M16, C-terminal DB34_12525 032e266a329e61f1805c8d331dacb792 421 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 36 59 - T 11-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 DB34_12525 032e266a329e61f1805c8d331dacb792 421 Gene3D G3DSA:3.30.830.10 221 414 1.2E-63 T 11-10-2018 DB34_12525 032e266a329e61f1805c8d331dacb792 421 SUPERFAMILY SSF63411 5 208 1.92E-59 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 DB34_12525 032e266a329e61f1805c8d331dacb792 421 Gene3D G3DSA:3.30.830.10 6 220 6.7E-74 T 11-10-2018 DB34_12525 032e266a329e61f1805c8d331dacb792 421 Pfam PF00675 Insulinase (Peptidase family M16) 16 162 2.7E-43 T 11-10-2018 IPR011765 Peptidase M16, N-terminal DB34_00665 9f957ccc651bf43def776108d5a9b59b 118 SUPERFAMILY SSF55298 7 116 1.73E-29 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 DB34_00665 9f957ccc651bf43def776108d5a9b59b 118 Pfam PF01042 Endoribonuclease L-PSP 4 114 2.3E-25 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 DB34_00665 9f957ccc651bf43def776108d5a9b59b 118 Gene3D G3DSA:3.30.1330.40 1 117 4.6E-38 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 DB34_12210 32bcbb813b597da8250c1501e0755140 364 Pfam PF03739 Predicted permease YjgP/YjgQ family 14 360 5.9E-50 T 11-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 DB34_07995 67a2785620a0a18122ea66734935a6f6 257 Pfam PF08241 Methyltransferase domain 71 129 1.9E-5 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 DB34_07995 67a2785620a0a18122ea66734935a6f6 257 Gene3D G3DSA:3.40.50.150 29 179 2.1E-12 T 11-10-2018 DB34_07995 67a2785620a0a18122ea66734935a6f6 257 SUPERFAMILY SSF53335 83 188 1.04E-14 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB34_09915 e51003c1533d675bd1bc0c20b9c002ea 244 Pfam PF02348 Cytidylyltransferase 6 217 1.6E-34 T 11-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 DB34_09915 e51003c1533d675bd1bc0c20b9c002ea 244 SUPERFAMILY SSF53448 5 242 1.13E-48 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB34_09915 e51003c1533d675bd1bc0c20b9c002ea 244 Gene3D G3DSA:3.90.550.10 2 243 6.7E-72 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB34_09915 e51003c1533d675bd1bc0c20b9c002ea 244 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 3 236 7.7E-49 T 11-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 DB34_00095 b4d36f1e05d2c590627f3b380d571298 488 Pfam PF04966 Carbohydrate-selective porin, OprB family 109 486 1.8E-79 T 11-10-2018 IPR007049 Carbohydrate-selective porin OprB GO:0008643|GO:0015288|GO:0016021 DB34_00095 b4d36f1e05d2c590627f3b380d571298 488 Gene3D G3DSA:2.40.160.180 68 488 8.8E-113 T 11-10-2018 IPR038673 Carbohydrate-selective porin OprB superfamily DB34_07555 5a105dec0339bd790c256a81d52699b3 291 SUPERFAMILY SSF51735 17 274 5.16E-47 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily DB34_07555 5a105dec0339bd790c256a81d52699b3 291 Gene3D G3DSA:3.40.50.720 6 277 3.3E-46 T 11-10-2018 DB34_07555 5a105dec0339bd790c256a81d52699b3 291 Pfam PF00106 short chain dehydrogenase 24 220 2.4E-33 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_07555 5a105dec0339bd790c256a81d52699b3 291 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 24 41 7.6E-15 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_07555 5a105dec0339bd790c256a81d52699b3 291 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 170 7.6E-15 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_07555 5a105dec0339bd790c256a81d52699b3 291 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 218 7.6E-15 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_07555 5a105dec0339bd790c256a81d52699b3 291 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 199 7.6E-15 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_07555 5a105dec0339bd790c256a81d52699b3 291 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 94 105 7.6E-15 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB34_07555 5a105dec0339bd790c256a81d52699b3 291 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 167 195 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DB34_03470 4ef9fca2afc6257b0c336149153b7375 315 SUPERFAMILY SSF53448 12 227 1.5E-33 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB34_03470 4ef9fca2afc6257b0c336149153b7375 315 Gene3D G3DSA:3.90.550.10 2 235 6.7E-24 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB34_03470 4ef9fca2afc6257b0c336149153b7375 315 Pfam PF00535 Glycosyl transferase family 2 14 130 9.0E-12 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DB34_12995 e7cd8cd6763035eb5570a1f16a174b10 265 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 15 88 2.4E-25 T 11-10-2018 IPR025161 Putative transposase IS4/IS5 family DB34_12995 e7cd8cd6763035eb5570a1f16a174b10 265 Pfam PF01609 Transposase DDE domain 105 254 4.0E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 DB34_10570 abc521aff255ce8c24bbda9cd65eb660 378 Gene3D G3DSA:3.20.20.70 4 378 1.3E-134 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB34_10570 abc521aff255ce8c24bbda9cd65eb660 378 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 351 4.7E-86 T 11-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 DB34_10570 abc521aff255ce8c24bbda9cd65eb660 378 SUPERFAMILY SSF51395 5 375 2.32E-122 T 11-10-2018 DB34_07465 3d029794ce07c604a3518d5c67cf9772 282 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 135 169 1.2E-4 T 11-10-2018 IPR001451 Hexapeptide repeat DB34_07465 3d029794ce07c604a3518d5c67cf9772 282 Gene3D G3DSA:1.10.166.10 2 71 3.0E-26 T 11-10-2018 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily KEGG: 00300+2.3.1.117 DB34_07465 3d029794ce07c604a3518d5c67cf9772 282 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 3 282 54.939 T 11-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 DB34_07465 3d029794ce07c604a3518d5c67cf9772 282 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 6 281 2.7E-125 T 11-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 DB34_07465 3d029794ce07c604a3518d5c67cf9772 282 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 178 213 2.5E-12 T 11-10-2018 IPR001451 Hexapeptide repeat DB34_07465 3d029794ce07c604a3518d5c67cf9772 282 Gene3D G3DSA:2.160.10.10 90 267 9.5E-53 T 11-10-2018 DB34_07465 3d029794ce07c604a3518d5c67cf9772 282 SUPERFAMILY SSF51161 6 264 6.81E-68 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily DB34_07465 3d029794ce07c604a3518d5c67cf9772 282 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 6 70 2.1E-25 T 11-10-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 DB34_07780 3f4f2f0991a1be2ebb2a2fa573323ae9 328 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 13 318 72.671 T 11-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 DB34_07780 3f4f2f0991a1be2ebb2a2fa573323ae9 328 Gene3D G3DSA:3.40.50.1370 6 152 4.5E-49 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 DB34_07780 3f4f2f0991a1be2ebb2a2fa573323ae9 328 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 14 317 2.8E-109 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 DB34_07780 3f4f2f0991a1be2ebb2a2fa573323ae9 328 PRINTS PR00102 Ornithine carbamoyltransferase signature 61 75 2.0E-27 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 DB34_07780 3f4f2f0991a1be2ebb2a2fa573323ae9 328 PRINTS PR00102 Ornithine carbamoyltransferase signature 233 243 2.0E-27 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 DB34_07780 3f4f2f0991a1be2ebb2a2fa573323ae9 328 PRINTS PR00102 Ornithine carbamoyltransferase signature 296 307 2.0E-27 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 DB34_07780 3f4f2f0991a1be2ebb2a2fa573323ae9 328 PRINTS PR00102 Ornithine carbamoyltransferase signature 94 107 2.0E-27 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 DB34_07780 3f4f2f0991a1be2ebb2a2fa573323ae9 328 PRINTS PR00102 Ornithine carbamoyltransferase signature 134 148 2.0E-27 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 DB34_07780 3f4f2f0991a1be2ebb2a2fa573323ae9 328 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 145 156 8.7E-26 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DB34_07780 3f4f2f0991a1be2ebb2a2fa573323ae9 328 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 279 8.7E-26 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DB34_07780 3f4f2f0991a1be2ebb2a2fa573323ae9 328 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 63 82 8.7E-26 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DB34_07780 3f4f2f0991a1be2ebb2a2fa573323ae9 328 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 282 305 8.7E-26 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DB34_07780 3f4f2f0991a1be2ebb2a2fa573323ae9 328 SUPERFAMILY SSF53671 12 319 4.19E-100 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 DB34_07780 3f4f2f0991a1be2ebb2a2fa573323ae9 328 Gene3D G3DSA:3.40.50.1370 153 304 3.1E-60 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 DB34_07780 3f4f2f0991a1be2ebb2a2fa573323ae9 328 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 14 158 1.5E-47 T 11-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 DB34_07780 3f4f2f0991a1be2ebb2a2fa573323ae9 328 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 165 315 1.5E-49 T 11-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 DB34_12910 b8417248c0c62e2195228091924302df 324 Pfam PF00535 Glycosyl transferase family 2 10 175 5.5E-29 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DB34_12910 b8417248c0c62e2195228091924302df 324 SUPERFAMILY SSF53448 6 238 2.17E-32 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB34_12910 b8417248c0c62e2195228091924302df 324 Gene3D G3DSA:3.90.550.10 4 195 4.9E-33 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB34_12535 857c523f2f79b40ba8e27f44851edafe 323 SUPERFAMILY SSF54427 197 321 8.0E-23 T 11-10-2018 IPR032710 NTF2-like domain superfamily DB34_12535 857c523f2f79b40ba8e27f44851edafe 323 SMART SM00978 182 320 1.3E-32 T 11-10-2018 IPR007379 Tim44-like domain DB34_12535 857c523f2f79b40ba8e27f44851edafe 323 Gene3D G3DSA:3.10.450.240 195 323 6.1E-13 T 11-10-2018 DB34_12535 857c523f2f79b40ba8e27f44851edafe 323 Pfam PF04280 Tim44-like domain 197 320 7.5E-28 T 11-10-2018 IPR007379 Tim44-like domain DB34_10315 c085aba90dc682b7c3a66fa6936e8624 683 ProSitePatterns PS00928 Trehalase signature 2. 498 507 - T 11-10-2018 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 DB34_10315 c085aba90dc682b7c3a66fa6936e8624 683 PRINTS PR00744 Glycosyl hydrolase family 37 signature 244 262 6.8E-36 T 11-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 DB34_10315 c085aba90dc682b7c3a66fa6936e8624 683 PRINTS PR00744 Glycosyl hydrolase family 37 signature 491 507 6.8E-36 T 11-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 DB34_10315 c085aba90dc682b7c3a66fa6936e8624 683 PRINTS PR00744 Glycosyl hydrolase family 37 signature 572 585 6.8E-36 T 11-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 DB34_10315 c085aba90dc682b7c3a66fa6936e8624 683 PRINTS PR00744 Glycosyl hydrolase family 37 signature 319 336 6.8E-36 T 11-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 DB34_10315 c085aba90dc682b7c3a66fa6936e8624 683 PRINTS PR00744 Glycosyl hydrolase family 37 signature 352 369 6.8E-36 T 11-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 DB34_10315 c085aba90dc682b7c3a66fa6936e8624 683 PRINTS PR00744 Glycosyl hydrolase family 37 signature 427 443 6.8E-36 T 11-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 DB34_10315 c085aba90dc682b7c3a66fa6936e8624 683 PRINTS PR00744 Glycosyl hydrolase family 37 signature 384 401 6.8E-36 T 11-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 DB34_10315 c085aba90dc682b7c3a66fa6936e8624 683 Gene3D G3DSA:1.50.10.10 87 601 3.2E-153 T 11-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 DB34_10315 c085aba90dc682b7c3a66fa6936e8624 683 SUPERFAMILY SSF48208 92 594 5.95E-136 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 DB34_10315 c085aba90dc682b7c3a66fa6936e8624 683 Pfam PF01204 Trehalase 108 588 4.7E-132 T 11-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 DB34_10315 c085aba90dc682b7c3a66fa6936e8624 683 ProSitePatterns PS00927 Trehalase signature 1. 202 215 - T 11-10-2018 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 DB34_05465 ac74ff2a024416425335da2b19a81854 555 Pfam PF07396 Phosphate-selective porin O and P 172 555 1.4E-38 T 11-10-2018 IPR010870 Phosphate-selective porin O/P DB34_05465 ac74ff2a024416425335da2b19a81854 555 Gene3D G3DSA:2.40.160.10 146 555 3.9E-74 T 11-10-2018 IPR023614 Porin domain superfamily DB34_05015 99f965d7b1410ed22d8005b49db14dde 382 Pfam PF04339 Peptidogalycan biosysnthesis/recognition 11 379 3.0E-154 T 11-10-2018 IPR007434 Peptidogalycan biosysnthesis/recognition DB34_05015 99f965d7b1410ed22d8005b49db14dde 382 SUPERFAMILY SSF55729 182 348 2.9E-39 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase DB34_13445 33f050aa8d14a8f32d6851f082a38410 286 Gene3D G3DSA:3.40.50.1000 1 101 7.7E-6 T 11-10-2018 IPR023214 HAD superfamily DB34_06635 1e40aa6323648ccfaf76f5f463b71d72 229 Pfam PF06776 Invasion associated locus B (IalB) protein 72 217 2.2E-16 T 11-10-2018 IPR010642 Invasion protein B DB34_06635 1e40aa6323648ccfaf76f5f463b71d72 229 Gene3D G3DSA:2.60.40.1880 69 225 4.9E-13 T 11-10-2018 IPR038696 Invasion protein B superfamily DB34_08770 2e341d3bd28ebeed04e5ad8cebc1e1f7 254 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 250 2.8E-17 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB34_08770 2e341d3bd28ebeed04e5ad8cebc1e1f7 254 Gene3D G3DSA:1.10.3720.10 57 251 2.7E-23 T 11-10-2018 IPR035906 MetI-like superfamily DB34_08770 2e341d3bd28ebeed04e5ad8cebc1e1f7 254 SUPERFAMILY SSF161098 57 241 3.27E-26 T 11-10-2018 IPR035906 MetI-like superfamily DB34_00160 44d951c9e320d47dd32e930a2e3601b2 161 Gene3D G3DSA:3.40.50.960 13 160 3.6E-49 T 11-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DB34_00160 44d951c9e320d47dd32e930a2e3601b2 161 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 20 154 6.8E-40 T 11-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DB34_00160 44d951c9e320d47dd32e930a2e3601b2 161 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 20 156 9.6E-45 T 11-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DB34_00160 44d951c9e320d47dd32e930a2e3601b2 161 SUPERFAMILY SSF52121 18 159 5.63E-50 T 11-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DB34_00160 44d951c9e320d47dd32e930a2e3601b2 161 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 14 159 25.72 T 11-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DB34_06795 759e8ab1611c2eea7cd5b685eb64f5d1 350 Hamap MF_00469 UPF0176 protein YceA [yceA]. 17 273 43.872 T 11-10-2018 IPR020936 Uncharacterised protein family UPF0176 DB34_06795 759e8ab1611c2eea7cd5b685eb64f5d1 350 Pfam PF00581 Rhodanese-like domain 131 229 2.2E-8 T 11-10-2018 IPR001763 Rhodanese-like domain DB34_06795 759e8ab1611c2eea7cd5b685eb64f5d1 350 SUPERFAMILY SSF52821 105 244 5.21E-27 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily DB34_06795 759e8ab1611c2eea7cd5b685eb64f5d1 350 Gene3D G3DSA:3.40.250.10 112 268 1.2E-45 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily DB34_06795 759e8ab1611c2eea7cd5b685eb64f5d1 350 SMART SM00450 128 233 3.7E-16 T 11-10-2018 IPR001763 Rhodanese-like domain DB34_06795 759e8ab1611c2eea7cd5b685eb64f5d1 350 Gene3D G3DSA:3.30.70.100 9 111 6.7E-30 T 11-10-2018 DB34_11900 0e2b3b4b7960d63a53c67a98b79870f3 446 Pfam PF07995 Glucose / Sorbosone dehydrogenase 175 369 1.7E-11 T 11-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase DB34_11900 0e2b3b4b7960d63a53c67a98b79870f3 446 SUPERFAMILY SSF50952 72 443 2.35E-37 T 11-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 DB34_11900 0e2b3b4b7960d63a53c67a98b79870f3 446 Gene3D G3DSA:2.120.10.30 67 384 1.9E-16 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like DB34_08630 b065d3e5d5e5bc392dc4f840fbd3a2f8 102 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 2.8E-18 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_08630 b065d3e5d5e5bc392dc4f840fbd3a2f8 102 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 2.8E-18 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_08630 b065d3e5d5e5bc392dc4f840fbd3a2f8 102 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 2.8E-18 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_08630 b065d3e5d5e5bc392dc4f840fbd3a2f8 102 SUPERFAMILY SSF54999 6 102 5.89E-40 T 11-10-2018 IPR036838 Ribosomal protein S10 domain superfamily DB34_08630 b065d3e5d5e5bc392dc4f840fbd3a2f8 102 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 4.8E-47 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_08630 b065d3e5d5e5bc392dc4f840fbd3a2f8 102 SMART SM01403 7 101 3.2E-60 T 11-10-2018 IPR027486 Ribosomal protein S10 domain DB34_08630 b065d3e5d5e5bc392dc4f840fbd3a2f8 102 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.699 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_08630 b065d3e5d5e5bc392dc4f840fbd3a2f8 102 Gene3D G3DSA:3.30.70.600 1 102 6.6E-41 T 11-10-2018 IPR036838 Ribosomal protein S10 domain superfamily DB34_08630 b065d3e5d5e5bc392dc4f840fbd3a2f8 102 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 11-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB34_08630 b065d3e5d5e5bc392dc4f840fbd3a2f8 102 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 8.2E-38 T 11-10-2018 IPR027486 Ribosomal protein S10 domain DB34_06035 2579af5dea2f2e9ec9f81c1c6fb1e17f 307 SUPERFAMILY SSF53850 90 299 1.99E-44 T 11-10-2018 DB34_06035 2579af5dea2f2e9ec9f81c1c6fb1e17f 307 Gene3D G3DSA:1.10.10.10 3 89 1.5E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB34_06035 2579af5dea2f2e9ec9f81c1c6fb1e17f 307 Gene3D G3DSA:3.40.190.290 91 294 4.9E-64 T 11-10-2018 DB34_06035 2579af5dea2f2e9ec9f81c1c6fb1e17f 307 SUPERFAMILY SSF46785 4 86 8.0E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB34_06035 2579af5dea2f2e9ec9f81c1c6fb1e17f 307 Pfam PF03466 LysR substrate binding domain 89 292 5.0E-41 T 11-10-2018 IPR005119 LysR, substrate-binding DB34_06035 2579af5dea2f2e9ec9f81c1c6fb1e17f 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 6.6E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB34_09310 b5657f4c68be3335862abcfe59042319 251 Pfam PF00156 Phosphoribosyl transferase domain 86 165 9.7E-9 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 DB34_09310 b5657f4c68be3335862abcfe59042319 251 Gene3D G3DSA:3.40.50.2020 12 241 1.0E-63 T 11-10-2018 DB34_09310 b5657f4c68be3335862abcfe59042319 251 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 251 30.478 T 11-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DB34_09310 b5657f4c68be3335862abcfe59042319 251 SUPERFAMILY SSF53271 26 234 1.53E-45 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like DB34_05225 e4b9c2cd0d106738bc13c0b6ad938a98 149 Pfam PF10696 Protein of unknown function (DUF2501) 78 147 5.5E-18 T 11-10-2018 IPR019637 Protein of unknown function DUF2501 DB34_08140 62c3994c76b776212bcba9eaa1fb523f 210 Pfam PF01713 Smr domain 127 207 3.1E-16 T 11-10-2018 IPR002625 Smr domain DB34_08140 62c3994c76b776212bcba9eaa1fb523f 210 SUPERFAMILY SSF160443 125 207 5.36E-14 T 11-10-2018 IPR036063 Smr domain superfamily DB34_08140 62c3994c76b776212bcba9eaa1fb523f 210 Gene3D G3DSA:3.30.1370.110 88 210 9.0E-26 T 11-10-2018 DB34_08140 62c3994c76b776212bcba9eaa1fb523f 210 SMART SM00463 124 207 6.2E-4 T 11-10-2018 IPR002625 Smr domain DB34_09600 11144b51f3b352ba771baf9613fdde05 170 Gene3D G3DSA:2.40.128.520 89 163 7.7E-13 T 11-10-2018 DB34_09600 11144b51f3b352ba771baf9613fdde05 170 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 51 157 4.3E-24 T 11-10-2018 IPR019223 Domain of unknown function DUF2147 DB34_07035 33e4da7eb1b18c872b5b21f530cb06fd 401 Gene3D G3DSA:3.30.1150.10 162 399 8.0E-12 T 11-10-2018 DB34_07035 33e4da7eb1b18c872b5b21f530cb06fd 401 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 321 397 1.9E-11 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 DB34_07035 33e4da7eb1b18c872b5b21f530cb06fd 401 SUPERFAMILY SSF74653 297 395 4.45E-12 T 11-10-2018 DB34_07805 e7b6dc0d275ddf9500768a1134f33bac 85 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 49 1.9E-19 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 DB34_07805 e7b6dc0d275ddf9500768a1134f33bac 85 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 77 20.21 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 DB34_07805 e7b6dc0d275ddf9500768a1134f33bac 85 Pfam PF02416 mttA/Hcf106 family 4 50 1.5E-9 T 11-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 DB34_01940 1a3141b7a86207a93822fec70487a8a3 302 Gene3D G3DSA:3.40.50.1980 37 187 1.8E-27 T 11-10-2018 DB34_01940 1a3141b7a86207a93822fec70487a8a3 302 SUPERFAMILY SSF53807 33 298 6.87E-45 T 11-10-2018 DB34_01940 1a3141b7a86207a93822fec70487a8a3 302 Pfam PF01297 Zinc-uptake complex component A periplasmic 40 276 3.7E-33 T 11-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 DB34_00115 101c75cf874237b60a60c343eb7ab386 66 Pfam PF07869 Protein of unknown function (DUF1656) 7 61 1.4E-13 T 11-10-2018 IPR012451 Protein of unknown function DUF1656 DB34_00625 ca4a1f2c7ae54eff42ad5e1ac732b076 375 SUPERFAMILY SSF50022 28 141 2.49E-31 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 DB34_00625 ca4a1f2c7ae54eff42ad5e1ac732b076 375 Pfam PF00355 Rieske [2Fe-2S] domain 31 121 9.5E-20 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 DB34_00625 ca4a1f2c7ae54eff42ad5e1ac732b076 375 SUPERFAMILY SSF55961 130 341 6.32E-24 T 11-10-2018 DB34_00625 ca4a1f2c7ae54eff42ad5e1ac732b076 375 Gene3D G3DSA:2.102.10.10 28 159 2.5E-34 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 DB34_02115 41371cfc38ae04bef171dcb28ad4ba86 194 Pfam PF13671 AAA domain 27 159 9.9E-11 T 11-10-2018 DB34_02115 41371cfc38ae04bef171dcb28ad4ba86 194 Gene3D G3DSA:3.40.50.300 25 192 3.0E-60 T 11-10-2018 DB34_02115 41371cfc38ae04bef171dcb28ad4ba86 194 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 28 180 2.3E-52 T 11-10-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 DB34_02115 41371cfc38ae04bef171dcb28ad4ba86 194 SUPERFAMILY SSF52540 26 188 2.63E-23 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_11980 b8b35c1fc9b1263c5d26669ef1690df5 563 Pfam PF06826 Predicted Permease Membrane Region 392 559 8.2E-30 T 11-10-2018 IPR006512 YidE/YbjL duplication DB34_11980 b8b35c1fc9b1263c5d26669ef1690df5 563 Pfam PF06826 Predicted Permease Membrane Region 19 181 5.0E-34 T 11-10-2018 IPR006512 YidE/YbjL duplication DB34_11980 b8b35c1fc9b1263c5d26669ef1690df5 563 SUPERFAMILY SSF116726 307 381 6.54E-6 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DB34_11980 b8b35c1fc9b1263c5d26669ef1690df5 563 TIGRFAM TIGR03802 Asp_Ala_antiprt: aspartate-alanine antiporter 8 562 4.5E-215 T 11-10-2018 IPR022457 Aspartate-alanine antiporter GO:0005215|GO:0016020 DB34_12245 c378ce84bbc8a07a7f9a7d26f2550d43 265 SMART SM00346 8 97 3.1E-15 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 DB34_12245 c378ce84bbc8a07a7f9a7d26f2550d43 265 SUPERFAMILY SSF55781 65 258 1.5E-37 T 11-10-2018 DB34_12245 c378ce84bbc8a07a7f9a7d26f2550d43 265 Pfam PF09339 IclR helix-turn-helix domain 10 60 6.6E-14 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 DB34_12245 c378ce84bbc8a07a7f9a7d26f2550d43 265 SUPERFAMILY SSF46785 8 76 4.29E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB34_12245 c378ce84bbc8a07a7f9a7d26f2550d43 265 Gene3D G3DSA:1.10.10.10 2 79 7.8E-29 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB34_12245 c378ce84bbc8a07a7f9a7d26f2550d43 265 Pfam PF01614 Bacterial transcriptional regulator 127 252 5.1E-21 T 11-10-2018 IPR014757 Transcription regulator IclR, C-terminal DB34_12245 c378ce84bbc8a07a7f9a7d26f2550d43 265 Gene3D G3DSA:3.30.450.40 81 262 1.8E-51 T 11-10-2018 IPR029016 GAF-like domain superfamily DB34_09245 15d0bc3d9f024e6793d084abd235a70c 168 Pfam PF00011 Hsp20/alpha crystallin family 41 136 8.3E-18 T 11-10-2018 IPR002068 Alpha crystallin/Hsp20 domain DB34_09245 15d0bc3d9f024e6793d084abd235a70c 168 Gene3D G3DSA:2.60.40.790 33 138 5.0E-23 T 11-10-2018 IPR008978 HSP20-like chaperone DB34_09245 15d0bc3d9f024e6793d084abd235a70c 168 SUPERFAMILY SSF49764 29 137 5.23E-22 T 11-10-2018 IPR008978 HSP20-like chaperone DB34_12800 8d3306364f5c8ca21e2138b1f29eead6 353 Pfam PF00534 Glycosyl transferases group 1 175 328 1.7E-32 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 DB34_12800 8d3306364f5c8ca21e2138b1f29eead6 353 Gene3D G3DSA:3.40.50.2000 161 334 2.2E-47 T 11-10-2018 DB34_12800 8d3306364f5c8ca21e2138b1f29eead6 353 Gene3D G3DSA:3.40.50.2000 126 343 2.2E-47 T 11-10-2018 DB34_12800 8d3306364f5c8ca21e2138b1f29eead6 353 SUPERFAMILY SSF53756 15 348 2.87E-60 T 11-10-2018 DB34_11215 938a8e12e7bdd887d05cd01178532a49 331 Gene3D G3DSA:3.40.50.620 4 328 5.6E-124 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DB34_11215 938a8e12e7bdd887d05cd01178532a49 331 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 1 330 37.141 T 11-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 DB34_11215 938a8e12e7bdd887d05cd01178532a49 331 Pfam PF00579 tRNA synthetases class I (W and Y) 3 279 8.7E-72 T 11-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB34_11215 938a8e12e7bdd887d05cd01178532a49 331 SUPERFAMILY SSF52374 2 329 2.58E-89 T 11-10-2018 DB34_11215 938a8e12e7bdd887d05cd01178532a49 331 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 140 161 9.9E-24 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 DB34_11215 938a8e12e7bdd887d05cd01178532a49 331 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 194 204 9.9E-24 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 DB34_11215 938a8e12e7bdd887d05cd01178532a49 331 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 14 30 9.9E-24 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 DB34_11215 938a8e12e7bdd887d05cd01178532a49 331 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 64 83 9.9E-24 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 DB34_11215 938a8e12e7bdd887d05cd01178532a49 331 Gene3D G3DSA:1.10.240.10 185 297 5.6E-124 T 11-10-2018 DB34_11215 938a8e12e7bdd887d05cd01178532a49 331 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 2 329 2.6E-91 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 DB34_00470 5bdeea02bf80389294c0c93e40013262 199 Gene3D G3DSA:3.30.230.30 1 127 4.7E-44 T 11-10-2018 IPR036956 Impact, N-terminal domain superfamily DB34_00470 5bdeea02bf80389294c0c93e40013262 199 SUPERFAMILY SSF54211 4 123 6.07E-37 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DB34_00470 5bdeea02bf80389294c0c93e40013262 199 SUPERFAMILY SSF54980 132 198 1.34E-8 T 11-10-2018 IPR035647 EF-G domain III/V-like DB34_00470 5bdeea02bf80389294c0c93e40013262 199 Pfam PF01205 Uncharacterized protein family UPF0029 16 118 1.5E-29 T 11-10-2018 IPR001498 Impact, N-terminal DB34_00470 5bdeea02bf80389294c0c93e40013262 199 Pfam PF09186 Domain of unknown function (DUF1949) 135 190 6.7E-7 T 11-10-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal DB34_00470 5bdeea02bf80389294c0c93e40013262 199 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 73 102 - T 11-10-2018 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site DB34_01215 aef30b222fb23acfe4d16f5ef3041976 761 Gene3D G3DSA:2.40.170.20 184 761 3.4E-55 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DB34_01215 aef30b222fb23acfe4d16f5ef3041976 761 Gene3D G3DSA:2.170.130.10 60 179 1.1E-18 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily DB34_01215 aef30b222fb23acfe4d16f5ef3041976 761 Pfam PF00593 TonB dependent receptor 283 760 2.0E-31 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel DB34_01215 aef30b222fb23acfe4d16f5ef3041976 761 Pfam PF07715 TonB-dependent Receptor Plug Domain 60 166 6.5E-15 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain DB34_01215 aef30b222fb23acfe4d16f5ef3041976 761 SUPERFAMILY SSF56935 40 761 6.96E-83 T 11-10-2018 DB34_05475 abd0da9593e81e758c9d99c4016efde5 288 SUPERFAMILY SSF53448 12 200 3.66E-10 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB34_10895 d3745791f76923f987fc9572c2cc499d 213 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 1 194 1.9E-65 T 11-10-2018 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 DB34_10895 d3745791f76923f987fc9572c2cc499d 213 Hamap MF_00812 Thiopurine S-methyltransferase [tpm]. 1 212 38.75 T 11-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 DB34_10895 d3745791f76923f987fc9572c2cc499d 213 TIGRFAM TIGR03840 TMPT_Se_Te: thiopurine S-methyltransferase, Se/Te detoxification family 4 210 3.6E-81 T 11-10-2018 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification GO:0008119|GO:0010038|GO:0032259 KEGG: 00983+2.1.1.67 DB34_10895 d3745791f76923f987fc9572c2cc499d 213 Gene3D G3DSA:3.40.50.150 1 211 1.7E-57 T 11-10-2018 DB34_10895 d3745791f76923f987fc9572c2cc499d 213 SUPERFAMILY SSF53335 1 197 6.18E-50 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB34_10895 d3745791f76923f987fc9572c2cc499d 213 PIRSF PIRSF023956 1 213 2.0E-81 T 11-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 DB34_10810 6686ab8954da0ba926b46e316ab7b024 177 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 53 1.3E-10 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 DB34_10810 6686ab8954da0ba926b46e316ab7b024 177 Gene3D G3DSA:1.20.1050.10 63 172 1.4E-21 T 11-10-2018 DB34_10810 6686ab8954da0ba926b46e316ab7b024 177 Gene3D G3DSA:3.40.30.10 1 61 2.5E-16 T 11-10-2018 DB34_10810 6686ab8954da0ba926b46e316ab7b024 177 SUPERFAMILY SSF47616 61 172 2.23E-18 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DB34_10810 6686ab8954da0ba926b46e316ab7b024 177 SUPERFAMILY SSF52833 3 64 1.17E-17 T 11-10-2018 IPR036249 Thioredoxin-like superfamily DB34_10810 6686ab8954da0ba926b46e316ab7b024 177 Pfam PF13410 Glutathione S-transferase, C-terminal domain 105 143 1.1E-6 T 11-10-2018 DB34_07610 672b970d828cc19b73fe9e47d3692881 514 SUPERFAMILY SSF56349 172 476 4.41E-30 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DB34_07610 672b970d828cc19b73fe9e47d3692881 514 Gene3D G3DSA:1.10.443.10 286 482 2.5E-11 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 DB34_07610 672b970d828cc19b73fe9e47d3692881 514 Gene3D G3DSA:1.10.150.130 165 278 1.4E-13 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal DB34_02595 221b6f919773fb2cfcc0d9357a2a079f 318 Pfam PF02470 MlaD protein 47 137 8.0E-14 T 11-10-2018 IPR003399 Mce/MlaD DB34_09725 c29d138815cf657d5ddea79c6b2d8ffa 264 SUPERFAMILY SSF56281 1 261 1.9E-49 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DB34_09725 c29d138815cf657d5ddea79c6b2d8ffa 264 SMART SM00849 39 232 3.5E-10 T 11-10-2018 IPR001279 Metallo-beta-lactamase DB34_09725 c29d138815cf657d5ddea79c6b2d8ffa 264 Pfam PF12706 Beta-lactamase superfamily domain 53 233 1.0E-29 T 11-10-2018 IPR001279 Metallo-beta-lactamase DB34_09725 c29d138815cf657d5ddea79c6b2d8ffa 264 Gene3D G3DSA:3.60.15.10 1 262 2.3E-65 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DB34_11885 e39851dec58224c3d12bc3b1b4f308d2 173 Gene3D G3DSA:1.20.1260.10 42 166 1.5E-5 T 11-10-2018 IPR012347 Ferritin-like DB34_11885 e39851dec58224c3d12bc3b1b4f308d2 173 Pfam PF13628 Domain of unknown function (DUF4142) 37 171 2.6E-39 T 11-10-2018 IPR025419 Domain of unknown function DUF4142 DB34_12340 3250c2b247a86ab84f15fead9973d9f6 186 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 27 178 41.542 T 11-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_12340 3250c2b247a86ab84f15fead9973d9f6 186 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 145 161 - T 11-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_12340 3250c2b247a86ab84f15fead9973d9f6 186 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 65 171 1.9E-21 T 11-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_12340 3250c2b247a86ab84f15fead9973d9f6 186 Gene3D G3DSA:3.40.50.12280 23 184 1.4E-77 T 11-10-2018 DB34_12340 3250c2b247a86ab84f15fead9973d9f6 186 SUPERFAMILY SSF56770 36 180 1.19E-66 T 11-10-2018 DB34_12340 3250c2b247a86ab84f15fead9973d9f6 186 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 38 179 9.7E-75 T 11-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_03385 c38603bc18a1503278f4da864ce44ab5 424 Pfam PF04932 O-Antigen ligase 200 356 1.4E-14 T 11-10-2018 IPR007016 O-antigen ligase-related DB34_01535 e90c46d9f78797bbcd001c2df2aab12a 450 PIRSF PIRSF000521 35 448 1.2E-32 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DB34_01535 e90c46d9f78797bbcd001c2df2aab12a 450 SUPERFAMILY SSF53383 13 447 1.5E-115 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB34_01535 e90c46d9f78797bbcd001c2df2aab12a 450 Gene3D G3DSA:3.90.1150.10 34 438 5.0E-144 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB34_01535 e90c46d9f78797bbcd001c2df2aab12a 450 Pfam PF00202 Aminotransferase class-III 35 445 1.2E-99 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DB34_01535 e90c46d9f78797bbcd001c2df2aab12a 450 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 259 296 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DB34_01535 e90c46d9f78797bbcd001c2df2aab12a 450 Gene3D G3DSA:3.40.640.10 70 351 5.0E-144 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB34_00610 e843722fffec3332f3b8946a31596ca1 263 Hamap MF_00201 DNA repair protein RecO [recO]. 9 250 14.536 T 11-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 DB34_00610 e843722fffec3332f3b8946a31596ca1 263 ProDom PD202328 DNA REPAIR RECOMBINATION RECO DAMAGE O O RECO-RELATED RECOMBINATIONAL RP549 146 248 1.0E-21 T 11-10-2018 DB34_00610 e843722fffec3332f3b8946a31596ca1 263 SUPERFAMILY SSF57863 98 196 1.39E-9 T 11-10-2018 IPR037278 ARFGAP/RecO-like zinc finger DB34_00610 e843722fffec3332f3b8946a31596ca1 263 Pfam PF02565 Recombination protein O C terminal 94 229 2.9E-23 T 11-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 DB34_00610 e843722fffec3332f3b8946a31596ca1 263 Pfam PF11967 Recombination protein O N terminal 12 69 8.3E-7 T 11-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal DB34_00610 e843722fffec3332f3b8946a31596ca1 263 TIGRFAM TIGR00613 reco: DNA repair protein RecO 16 207 1.0E-18 T 11-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 DB34_02960 58ba27e0a5f0a253ec155ce478882480 247 Gene3D G3DSA:1.20.120.1940 30 129 1.5E-14 T 11-10-2018 DB34_02960 58ba27e0a5f0a253ec155ce478882480 247 Pfam PF10938 YfdX protein 65 231 3.5E-41 T 11-10-2018 IPR021236 Uncharacterised protein family YfdX DB34_10015 17205a271f548738cc3299b935590dc5 203 Pfam PF03741 Integral membrane protein TerC family 18 192 2.2E-41 T 11-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 DB34_10015 17205a271f548738cc3299b935590dc5 203 TIGRFAM TIGR03717 R_switched_YjbE: integral membrane protein, YjbE family 15 192 4.6E-59 T 11-10-2018 IPR022301 Integral membrane protein YjbE DB34_07445 515f87ad0543bb06de68b1cfa2a3228f 126 SUPERFAMILY SSF54211 16 122 3.29E-24 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DB34_07445 515f87ad0543bb06de68b1cfa2a3228f 126 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 30 100 1.0E-4 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 DB34_07445 515f87ad0543bb06de68b1cfa2a3228f 126 Gene3D G3DSA:3.30.230.10 12 125 2.4E-25 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DB34_07445 515f87ad0543bb06de68b1cfa2a3228f 126 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 14 125 15.959 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 DB34_07445 515f87ad0543bb06de68b1cfa2a3228f 126 Pfam PF00825 Ribonuclease P 16 120 3.5E-21 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 DB34_07445 515f87ad0543bb06de68b1cfa2a3228f 126 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 18 123 4.2E-18 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 DB34_13410 c1df17bf6ccaa1bb2114ce86fec746a6 278 SUPERFAMILY SSF56655 3 274 4.19E-81 T 11-10-2018 DB34_13410 c1df17bf6ccaa1bb2114ce86fec746a6 278 PRINTS PR01959 SuhB family inositol monophosphatase signature 113 132 2.0E-12 T 11-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 DB34_13410 c1df17bf6ccaa1bb2114ce86fec746a6 278 PRINTS PR01959 SuhB family inositol monophosphatase signature 21 43 2.0E-12 T 11-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 DB34_13410 c1df17bf6ccaa1bb2114ce86fec746a6 278 PRINTS PR01959 SuhB family inositol monophosphatase signature 209 221 2.0E-12 T 11-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 DB34_13410 c1df17bf6ccaa1bb2114ce86fec746a6 278 Pfam PF00459 Inositol monophosphatase family 7 273 1.4E-61 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DB34_13410 c1df17bf6ccaa1bb2114ce86fec746a6 278 Gene3D G3DSA:3.30.540.10 2 149 2.9E-46 T 11-10-2018 DB34_13410 c1df17bf6ccaa1bb2114ce86fec746a6 278 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 222 236 - T 11-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 DB34_13410 c1df17bf6ccaa1bb2114ce86fec746a6 278 Gene3D G3DSA:3.40.190.80 150 277 6.9E-37 T 11-10-2018 DB34_13410 c1df17bf6ccaa1bb2114ce86fec746a6 278 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 85 98 - T 11-10-2018 IPR020583 Inositol monophosphatase, metal-binding site DB34_13410 c1df17bf6ccaa1bb2114ce86fec746a6 278 PRINTS PR00377 Inositol monophosphatase superfamily signature 64 80 1.6E-54 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DB34_13410 c1df17bf6ccaa1bb2114ce86fec746a6 278 PRINTS PR00377 Inositol monophosphatase superfamily signature 219 243 1.6E-54 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DB34_13410 c1df17bf6ccaa1bb2114ce86fec746a6 278 PRINTS PR00377 Inositol monophosphatase superfamily signature 42 62 1.6E-54 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DB34_13410 c1df17bf6ccaa1bb2114ce86fec746a6 278 PRINTS PR00377 Inositol monophosphatase superfamily signature 188 209 1.6E-54 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DB34_13410 c1df17bf6ccaa1bb2114ce86fec746a6 278 PRINTS PR00377 Inositol monophosphatase superfamily signature 139 162 1.6E-54 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DB34_13410 c1df17bf6ccaa1bb2114ce86fec746a6 278 PRINTS PR00377 Inositol monophosphatase superfamily signature 85 101 1.6E-54 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DB34_03245 c4bb150af5640ce0331b6ae63326d5ea 179 Pfam PF05258 Protein of unknown function (DUF721) 40 125 6.0E-16 T 11-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 DB34_03245 c4bb150af5640ce0331b6ae63326d5ea 179 PIRSF PIRSF032064 12 177 3.0E-27 T 11-10-2018 IPR010593 Protein of unknown function DUF1159 DB34_12380 8454ba1d534b3dbd08a376d19856f99d 217 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 101 112 - T 11-10-2018 IPR018215 ClpP, Ser active site DB34_12380 8454ba1d534b3dbd08a376d19856f99d 217 Gene3D G3DSA:3.90.226.10 5 209 4.3E-84 T 11-10-2018 DB34_12380 8454ba1d534b3dbd08a376d19856f99d 217 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 14 204 42.621 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DB34_12380 8454ba1d534b3dbd08a376d19856f99d 217 PRINTS PR00127 Clp protease catalytic subunit P signature 30 45 2.3E-50 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DB34_12380 8454ba1d534b3dbd08a376d19856f99d 217 PRINTS PR00127 Clp protease catalytic subunit P signature 179 198 2.3E-50 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DB34_12380 8454ba1d534b3dbd08a376d19856f99d 217 PRINTS PR00127 Clp protease catalytic subunit P signature 70 90 2.3E-50 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DB34_12380 8454ba1d534b3dbd08a376d19856f99d 217 PRINTS PR00127 Clp protease catalytic subunit P signature 101 118 2.3E-50 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DB34_12380 8454ba1d534b3dbd08a376d19856f99d 217 PRINTS PR00127 Clp protease catalytic subunit P signature 122 141 2.3E-50 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DB34_12380 8454ba1d534b3dbd08a376d19856f99d 217 Pfam PF00574 Clp protease 23 203 3.2E-83 T 11-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA DB34_12380 8454ba1d534b3dbd08a376d19856f99d 217 SUPERFAMILY SSF52096 21 206 4.66E-71 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DB34_12380 8454ba1d534b3dbd08a376d19856f99d 217 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 123 136 - T 11-10-2018 IPR033135 ClpP, histidine active site DB34_02695 48db0fc6a6f3a120f663f6464581a922 193 Hamap MF_01398 ATP synthase subunit b [atpF]. 31 173 10.364 T 11-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 DB34_02695 48db0fc6a6f3a120f663f6464581a922 193 Pfam PF00430 ATP synthase B/B' CF(0) 43 169 6.6E-16 T 11-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 DB34_06085 7f7767727cde1e97e21e26de03b91976 488 Gene3D G3DSA:1.20.1730.10 24 487 3.0E-76 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily DB34_06085 7f7767727cde1e97e21e26de03b91976 488 Pfam PF00474 Sodium:solute symporter family 33 426 2.6E-26 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 DB34_13200 ae4a7b41d347f8411d4dc73b01cd950a 369 Gene3D G3DSA:3.30.1930.10 172 299 2.3E-94 T 11-10-2018 DB34_13200 ae4a7b41d347f8411d4dc73b01cd950a 369 Pfam PF03864 Phage major capsid protein E 21 355 3.3E-71 T 11-10-2018 IPR005564 Major capsid protein GpE DB34_13200 ae4a7b41d347f8411d4dc73b01cd950a 369 Gene3D G3DSA:3.15.30.10 44 346 2.3E-94 T 11-10-2018 DB34_12280 9f8d3f2e087b22675c9be44d12fac04f 247 SUPERFAMILY SSF55681 3 195 1.41E-37 T 11-10-2018 DB34_12280 9f8d3f2e087b22675c9be44d12fac04f 247 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 11 243 3.4E-33 T 11-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DB34_12280 9f8d3f2e087b22675c9be44d12fac04f 247 Pfam PF03099 Biotin/lipoate A/B protein ligase family 26 126 1.0E-9 T 11-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 DB34_12280 9f8d3f2e087b22675c9be44d12fac04f 247 Gene3D G3DSA:3.30.930.10 1 196 2.0E-42 T 11-10-2018 DB34_12280 9f8d3f2e087b22675c9be44d12fac04f 247 Pfam PF02237 Biotin protein ligase C terminal domain 213 243 6.0E-7 T 11-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DB34_00100 00db9f48f27ff21903fd568e4f7be6e8 901 Gene3D G3DSA:3.40.50.300 2 268 3.5E-13 T 11-10-2018 DB34_00100 00db9f48f27ff21903fd568e4f7be6e8 901 Gene3D G3DSA:3.40.50.300 683 895 2.8E-16 T 11-10-2018 DB34_00100 00db9f48f27ff21903fd568e4f7be6e8 901 SUPERFAMILY SSF52540 23 891 2.04E-13 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_02750 b1212c9988c6ae47142cbfd2fe60040e 530 Gene3D G3DSA:3.40.50.1820 73 315 1.4E-21 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold DB34_02750 b1212c9988c6ae47142cbfd2fe60040e 530 Pfam PF00450 Serine carboxypeptidase 93 491 2.3E-20 T 11-10-2018 IPR001563 Peptidase S10, serine carboxypeptidase GO:0004185|GO:0006508 DB34_02750 b1212c9988c6ae47142cbfd2fe60040e 530 ProSitePatterns PS00131 Serine carboxypeptidases, serine active site. 235 242 - T 11-10-2018 IPR018202 Serine carboxypeptidase, serine active site DB34_02750 b1212c9988c6ae47142cbfd2fe60040e 530 SUPERFAMILY SSF53474 88 518 1.77E-61 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold DB34_00285 9e8993a35eb604c4cd8333ee0bbb7ada 87 SUPERFAMILY SSF46689 1 84 2.87E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB34_00285 9e8993a35eb604c4cd8333ee0bbb7ada 87 Pfam PF01527 Transposase 4 71 3.1E-18 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 DB34_11520 c7d746e5260eb1bd720f245538ce0dc2 505 Pfam PF05133 Phage portal protein, SPP1 Gp6-like 68 448 5.6E-10 T 11-10-2018 IPR021145 Portal protein DB34_05390 7351b8c4a31a3dab11bd9b924c2046fa 282 Gene3D G3DSA:3.40.630.30 30 175 6.8E-22 T 11-10-2018 DB34_05390 7351b8c4a31a3dab11bd9b924c2046fa 282 Pfam PF13444 Acetyltransferase (GNAT) domain 46 153 1.7E-34 T 11-10-2018 DB34_05390 7351b8c4a31a3dab11bd9b924c2046fa 282 SUPERFAMILY SSF55729 29 249 2.39E-39 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase DB34_11810 d8fc28a11e25f79d95b9a5a1146d4c38 203 Pfam PF13586 Transposase DDE domain 118 202 9.0E-16 T 11-10-2018 IPR025668 Transposase DDE domain DB34_12125 d84dacc976f712b68ba295b0260482e4 348 Gene3D G3DSA:2.60.120.330 2 321 5.9E-97 T 11-10-2018 IPR027443 Isopenicillin N synthase-like DB34_12125 d84dacc976f712b68ba295b0260482e4 348 SUPERFAMILY SSF51197 10 316 6.87E-91 T 11-10-2018 DB34_12125 d84dacc976f712b68ba295b0260482e4 348 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 13 136 9.5E-32 T 11-10-2018 IPR026992 Non-haem dioxygenase N-terminal domain DB34_12125 d84dacc976f712b68ba295b0260482e4 348 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 185 276 2.2E-19 T 11-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 DB34_12125 d84dacc976f712b68ba295b0260482e4 348 PRINTS PR00682 Isopenicillin N synthase signature 36 53 2.3E-11 T 11-10-2018 DB34_12125 d84dacc976f712b68ba295b0260482e4 348 PRINTS PR00682 Isopenicillin N synthase signature 266 284 2.3E-11 T 11-10-2018 DB34_12125 d84dacc976f712b68ba295b0260482e4 348 PRINTS PR00682 Isopenicillin N synthase signature 157 173 2.3E-11 T 11-10-2018 DB34_09400 d1c3fa9dc68e25161cca3c850cb95a4a 353 Gene3D G3DSA:3.20.20.140 10 351 1.1E-113 T 11-10-2018 DB34_09400 d1c3fa9dc68e25161cca3c850cb95a4a 353 SUPERFAMILY SSF51556 9 348 8.85E-87 T 11-10-2018 IPR032466 Metal-dependent hydrolase DB34_09400 d1c3fa9dc68e25161cca3c850cb95a4a 353 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 15 341 3.8E-100 T 11-10-2018 IPR008257 Peptidase M19 GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 DB34_05530 e9666aeb88eb4af6116285b9db281551 175 Pfam PF10696 Protein of unknown function (DUF2501) 106 173 5.5E-6 T 11-10-2018 IPR019637 Protein of unknown function DUF2501 DB34_06805 be9d7d6e96a31b6922d1630065d62368 333 Pfam PF09979 Uncharacterized protein conserved in bacteria (DUF2213) 32 197 1.4E-47 T 11-10-2018 IPR016913 Uncharacterised conserved protein UCP029215 DB34_02190 97f45d49872d3e36ddd8b0bbdb2ccdf0 534 TIGRFAM TIGR03409 urea_trans_UrtB: urea ABC transporter, permease protein UrtB 240 530 1.0E-120 T 11-10-2018 IPR017779 ABC transporter, urea permease protein UrtB, bacterial-type DB34_02190 97f45d49872d3e36ddd8b0bbdb2ccdf0 534 Pfam PF02653 Branched-chain amino acid transport system / permease component 242 502 2.0E-46 T 11-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DB34_02190 97f45d49872d3e36ddd8b0bbdb2ccdf0 534 SUPERFAMILY SSF48371 122 231 7.57E-6 T 11-10-2018 IPR016024 Armadillo-type fold DB34_03210 57e94d01ddb766c1aed2df8388d7dbd0 84 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 23 81 1.7E-9 T 11-10-2018 IPR012933 HicA mRNA interferase family GO:0003729 DB34_10495 a72708545f67c6da3c76ff3546240881 375 Pfam PF12698 ABC-2 family transporter protein 24 365 7.0E-34 T 11-10-2018 DB34_00195 1e254ab75aaaa4267ce2d1436d768c91 183 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 11-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 DB34_00195 1e254ab75aaaa4267ce2d1436d768c91 183 Pfam PF03358 NADPH-dependent FMN reductase 34 117 4.3E-10 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 DB34_00195 1e254ab75aaaa4267ce2d1436d768c91 183 Gene3D G3DSA:3.40.50.360 1 183 6.4E-54 T 11-10-2018 IPR029039 Flavoprotein-like superfamily DB34_00195 1e254ab75aaaa4267ce2d1436d768c91 183 SUPERFAMILY SSF52218 1 182 4.46E-41 T 11-10-2018 IPR029039 Flavoprotein-like superfamily DB34_06485 9a6f97406a6b9c14828cf9ccb74b3d2a 461 SUPERFAMILY SSF53098 155 398 1.06E-5 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily DB34_06485 9a6f97406a6b9c14828cf9ccb74b3d2a 461 Pfam PF13701 Transposase DDE domain group 1 13 458 1.3E-164 T 11-10-2018 IPR025668 Transposase DDE domain DB34_10980 9a6f97406a6b9c14828cf9ccb74b3d2a 461 SUPERFAMILY SSF53098 155 398 1.06E-5 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily DB34_10980 9a6f97406a6b9c14828cf9ccb74b3d2a 461 Pfam PF13701 Transposase DDE domain group 1 13 458 1.3E-164 T 11-10-2018 IPR025668 Transposase DDE domain DB34_01680 42f2313ba65393488e536f0ac4b0e4c6 270 Gene3D G3DSA:3.40.190.10 33 266 4.3E-84 T 11-10-2018 DB34_01680 42f2313ba65393488e536f0ac4b0e4c6 270 SUPERFAMILY SSF53850 33 269 1.94E-74 T 11-10-2018 DB34_01680 42f2313ba65393488e536f0ac4b0e4c6 270 Gene3D G3DSA:3.40.190.10 114 218 4.3E-84 T 11-10-2018 DB34_01680 42f2313ba65393488e536f0ac4b0e4c6 270 Pfam PF03180 NLPA lipoprotein 33 269 2.8E-85 T 11-10-2018 IPR004872 Lipoprotein NlpA family DB34_01680 42f2313ba65393488e536f0ac4b0e4c6 270 PIRSF PIRSF002854 2 270 1.3E-90 T 11-10-2018 IPR004872 Lipoprotein NlpA family DB34_04245 d77d63159098d0e452a301365d445a0e 715 Hamap MF_01072 Glucans biosynthesis glucosyltransferase H [mdoH]. 1 638 45.383 T 11-10-2018 IPR023725 Glucan biosynthesis glucosyltransferase H GO:0016758 DB34_04245 d77d63159098d0e452a301365d445a0e 715 SUPERFAMILY SSF53448 136 421 4.84E-23 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB34_04245 d77d63159098d0e452a301365d445a0e 715 Gene3D G3DSA:3.90.550.10 128 360 2.8E-15 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB34_04245 d77d63159098d0e452a301365d445a0e 715 Pfam PF13632 Glycosyl transferase family group 2 234 428 1.4E-13 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DB34_05200 65ef137dd1063f73164c293921070109 122 SUPERFAMILY SSF102829 4 67 2.75E-14 T 11-10-2018 IPR036192 Cell division protein ZapA-like superfamily DB34_05200 65ef137dd1063f73164c293921070109 122 Pfam PF05164 Cell division protein ZapA 4 101 4.6E-18 T 11-10-2018 IPR007838 Cell division protein ZapA-like DB34_03030 6ac42a587be16d1def6065ec7138ae34 244 Pfam PF09490 Probable cobalt transporter subunit (CbtA) 3 229 1.3E-62 T 11-10-2018 IPR012666 Cobalt transporter subunit CbtA, putative DB34_12670 01643739b88288fea6347fe472b0a578 219 Gene3D G3DSA:1.10.357.10 27 201 1.5E-25 T 11-10-2018 DB34_12670 01643739b88288fea6347fe472b0a578 219 Pfam PF08511 COQ9 138 205 8.2E-15 T 11-10-2018 IPR013718 COQ9 Reactome: R-HSA-2142789 DB34_12840 6d0c712761678ab2cab2f1738d28e0ba 206 Hamap MF_01207 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ [msrQ]. 14 200 18.462 T 11-10-2018 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 DB34_12840 6d0c712761678ab2cab2f1738d28e0ba 206 Pfam PF01794 Ferric reductase like transmembrane component 56 167 4.2E-15 T 11-10-2018 IPR013130 Ferric reductase transmembrane component-like domain DB34_11830 5ea1094374802bd6a386b7b8ab984942 461 SUPERFAMILY SSF53098 155 398 1.29E-5 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily DB34_11830 5ea1094374802bd6a386b7b8ab984942 461 Pfam PF13701 Transposase DDE domain group 1 13 458 1.4E-164 T 11-10-2018 IPR025668 Transposase DDE domain DB34_05130 5ea1094374802bd6a386b7b8ab984942 461 SUPERFAMILY SSF53098 155 398 1.29E-5 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily DB34_05130 5ea1094374802bd6a386b7b8ab984942 461 Pfam PF13701 Transposase DDE domain group 1 13 458 1.4E-164 T 11-10-2018 IPR025668 Transposase DDE domain DB34_01710 5ea1094374802bd6a386b7b8ab984942 461 SUPERFAMILY SSF53098 155 398 1.29E-5 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily DB34_01710 5ea1094374802bd6a386b7b8ab984942 461 Pfam PF13701 Transposase DDE domain group 1 13 458 1.4E-164 T 11-10-2018 IPR025668 Transposase DDE domain DB34_13425 de6bbfe7a172aae5050424b2bae49048 222 SUPERFAMILY SSF53474 4 218 2.7E-40 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold DB34_13425 de6bbfe7a172aae5050424b2bae49048 222 Gene3D G3DSA:3.40.50.1820 4 220 2.3E-50 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold DB34_13425 de6bbfe7a172aae5050424b2bae49048 222 Pfam PF01738 Dienelactone hydrolase family 28 218 3.0E-41 T 11-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 DB34_02785 42ff76fdb2f3624bf59a0873ba70b7d8 291 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 25 284 1.4E-82 T 11-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 DB34_02785 42ff76fdb2f3624bf59a0873ba70b7d8 291 SUPERFAMILY SSF161098 32 282 7.59E-33 T 11-10-2018 IPR035906 MetI-like superfamily DB34_02785 42ff76fdb2f3624bf59a0873ba70b7d8 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 97 284 9.7E-21 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB34_02785 42ff76fdb2f3624bf59a0873ba70b7d8 291 Gene3D G3DSA:1.10.3720.10 73 287 3.0E-26 T 11-10-2018 IPR035906 MetI-like superfamily DB34_06380 e3042cb64ed4c74dc133485f3b79df2c 283 Pfam PF04586 Caudovirus prohead serine protease 21 170 4.3E-23 T 11-10-2018 IPR006433 Prohead protease DB34_06380 e3042cb64ed4c74dc133485f3b79df2c 283 TIGRFAM TIGR01543 proheadase_HK97: phage prohead protease, HK97 family 26 171 1.4E-28 T 11-10-2018 IPR006433 Prohead protease DB34_11790 0c3a2d3a90f03100960a8c23047d5688 829 Pfam PF05506 Domain of unknown function (DUF756) 627 725 1.9E-13 T 11-10-2018 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 DB34_11790 0c3a2d3a90f03100960a8c23047d5688 829 Pfam PF04185 Phosphoesterase family 45 273 2.2E-48 T 11-10-2018 IPR007312 Phosphoesterase GO:0016788 DB34_11790 0c3a2d3a90f03100960a8c23047d5688 829 Pfam PF04185 Phosphoesterase family 368 533 1.2E-40 T 11-10-2018 IPR007312 Phosphoesterase GO:0016788 DB34_11790 0c3a2d3a90f03100960a8c23047d5688 829 Gene3D G3DSA:3.40.720.10 34 209 2.5E-30 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 DB34_11790 0c3a2d3a90f03100960a8c23047d5688 829 Gene3D G3DSA:3.40.720.10 344 591 4.7E-35 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 DB34_11790 0c3a2d3a90f03100960a8c23047d5688 829 TIGRFAM TIGR03396 PC_PLC: phospholipase C, phosphocholine-specific 3 826 2.4E-237 T 11-10-2018 IPR017767 Bacterial phospholipase C, phosphocholine-specific GO:0034480 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 DB34_03630 192d2582a53b867703ed3d91683dfefa 137 ProSitePatterns PS01328 4-hydroxybenzoyl-CoA thioesterase family active site. 9 26 - T 11-10-2018 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site GO:0016787 DB34_03630 192d2582a53b867703ed3d91683dfefa 137 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 4 127 4.3E-43 T 11-10-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 DB34_03630 192d2582a53b867703ed3d91683dfefa 137 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 8 122 1.4E-28 T 11-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 DB34_03630 192d2582a53b867703ed3d91683dfefa 137 Pfam PF13279 Thioesterase-like superfamily 13 124 2.6E-16 T 11-10-2018 DB34_03630 192d2582a53b867703ed3d91683dfefa 137 Gene3D G3DSA:3.10.129.10 1 135 9.2E-36 T 11-10-2018 DB34_03630 192d2582a53b867703ed3d91683dfefa 137 PIRSF PIRSF003230 1 136 3.8E-42 T 11-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 DB34_03630 192d2582a53b867703ed3d91683dfefa 137 SUPERFAMILY SSF54637 2 132 2.91E-37 T 11-10-2018 IPR029069 HotDog domain superfamily DB34_12510 b7e78282261b99468ce5f107860f7d04 501 PIRSF PIRSF006615 1 499 1.1E-165 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DB34_12510 b7e78282261b99468ce5f107860f7d04 501 SUPERFAMILY SSF55486 4 494 2.2E-104 T 11-10-2018 DB34_12510 b7e78282261b99468ce5f107860f7d04 501 Gene3D G3DSA:1.10.1370.30 1 498 1.6E-179 T 11-10-2018 DB34_12510 b7e78282261b99468ce5f107860f7d04 501 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 13 490 7.4E-78 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DB34_12510 b7e78282261b99468ce5f107860f7d04 501 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 289 305 9.2E-47 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DB34_12510 b7e78282261b99468ce5f107860f7d04 501 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 262 281 9.2E-47 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DB34_12510 b7e78282261b99468ce5f107860f7d04 501 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 145 165 9.2E-47 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DB34_12510 b7e78282261b99468ce5f107860f7d04 501 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 332 351 9.2E-47 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DB34_12510 b7e78282261b99468ce5f107860f7d04 501 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 378 395 9.2E-47 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DB34_12510 b7e78282261b99468ce5f107860f7d04 501 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 242 261 9.2E-47 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DB34_12510 b7e78282261b99468ce5f107860f7d04 501 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 401 422 9.2E-47 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DB34_12510 b7e78282261b99468ce5f107860f7d04 501 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 446 464 9.2E-47 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DB34_00265 5a47c42a3320ead72c284902162850b0 630 Pfam PF07510 Protein of unknown function (DUF1524) 489 620 1.4E-25 T 11-10-2018 IPR011089 Domain of unknown function DUF1524 DB34_00265 5a47c42a3320ead72c284902162850b0 630 Pfam PF03235 Protein of unknown function DUF262 88 306 4.5E-33 T 11-10-2018 IPR004919 Domain of unknown function DUF262 DB34_12975 8f5be9debfa015721c15ef930d3eafcd 216 Pfam PF14681 Uracil phosphoribosyltransferase 13 215 2.1E-71 T 11-10-2018 DB34_12975 8f5be9debfa015721c15ef930d3eafcd 216 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 10 216 42.257 T 11-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 DB34_12975 8f5be9debfa015721c15ef930d3eafcd 216 Gene3D G3DSA:3.40.50.2020 11 216 9.1E-77 T 11-10-2018 DB34_12975 8f5be9debfa015721c15ef930d3eafcd 216 SUPERFAMILY SSF53271 12 214 1.44E-65 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like DB34_12975 8f5be9debfa015721c15ef930d3eafcd 216 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 13 215 1.1E-77 T 11-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 DB34_06960 a085e973190af297778ceabd45f6e2ac 124 Pfam PF04343 Protein of unknown function, DUF488 9 115 3.3E-32 T 11-10-2018 IPR007438 Protein of unknown function DUF488 DB34_00685 703885c4b1f9af2ba0a48211dab19bff 400 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 236 249 - T 11-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 DB34_00685 703885c4b1f9af2ba0a48211dab19bff 400 SUPERFAMILY SSF53383 1 398 6.92E-114 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB34_00685 703885c4b1f9af2ba0a48211dab19bff 400 Gene3D G3DSA:3.40.640.10 63 286 1.1E-136 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB34_00685 703885c4b1f9af2ba0a48211dab19bff 400 Pfam PF00155 Aminotransferase class I and II 32 392 5.4E-76 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DB34_00685 703885c4b1f9af2ba0a48211dab19bff 400 Gene3D G3DSA:3.90.1150.10 26 392 1.1E-136 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB34_08120 5094ab36e72a96d7b62d3b5a53c6ff68 172 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 2 158 2.9E-24 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DB34_08120 5094ab36e72a96d7b62d3b5a53c6ff68 172 SUPERFAMILY SSF53254 2 160 1.21E-28 T 11-10-2018 IPR029033 Histidine phosphatase superfamily DB34_08120 5094ab36e72a96d7b62d3b5a53c6ff68 172 Gene3D G3DSA:3.40.50.1240 1 171 5.7E-30 T 11-10-2018 IPR029033 Histidine phosphatase superfamily DB34_11085 c053cf5655af9452646f87f900e94dd2 196 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 3 190 22.892 T 11-10-2018 IPR022929 Putative manganese efflux pump MntP DB34_11085 c053cf5655af9452646f87f900e94dd2 196 Pfam PF02659 Putative manganese efflux pump 33 187 2.5E-48 T 11-10-2018 IPR003810 Putative manganese efflux pump DB34_03530 d1f95d61c0e020149dd49ad2b38a62eb 256 PIRSF PIRSF004808 13 256 1.9E-78 T 11-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 DB34_03530 d1f95d61c0e020149dd49ad2b38a62eb 256 SUPERFAMILY SSF75217 17 178 7.85E-32 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases DB34_03530 d1f95d61c0e020149dd49ad2b38a62eb 256 Gene3D G3DSA:1.10.8.590 180 256 1.9E-13 T 11-10-2018 DB34_03530 d1f95d61c0e020149dd49ad2b38a62eb 256 Gene3D G3DSA:3.40.1280.10 15 176 2.2E-48 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DB34_03530 d1f95d61c0e020149dd49ad2b38a62eb 256 Pfam PF00588 SpoU rRNA Methylase family 18 168 7.7E-27 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 DB34_00140 25d6f00eeaa90afa83353efa7ac25705 864 SUPERFAMILY SSF82866 236 432 1.83E-25 T 11-10-2018 DB34_00140 25d6f00eeaa90afa83353efa7ac25705 864 TIGRFAM TIGR03480 HpnN: hopanoid biosynthesis associated RND transporter like protein HpnN 8 860 5.6E-298 T 11-10-2018 IPR017841 Hopanoid biosynthesis associated RND transporter-like protein HpnN DB34_00140 25d6f00eeaa90afa83353efa7ac25705 864 SUPERFAMILY SSF82866 692 856 2.09E-22 T 11-10-2018 DB34_00140 25d6f00eeaa90afa83353efa7ac25705 864 Gene3D G3DSA:1.20.1640.10 246 435 4.9E-11 T 11-10-2018 DB34_00140 25d6f00eeaa90afa83353efa7ac25705 864 Pfam PF03176 MMPL family 683 856 2.4E-6 T 11-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 DB34_00140 25d6f00eeaa90afa83353efa7ac25705 864 Pfam PF03176 MMPL family 233 428 3.7E-15 T 11-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 DB34_09950 7c0f1b4fd52d7ae0d63ba185161da56d 363 Pfam PF01594 AI-2E family transporter 16 339 3.0E-43 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like DB34_13615 3a9f736802ddd2a687c76798782de5f9 356 Pfam PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) 33 130 4.8E-8 T 11-10-2018 IPR029464 Type I restriction enzyme R protein, N-terminal domain DB34_03715 7dc6a87c5de43a84a35a09ebbe2c76f0 213 Gene3D G3DSA:1.10.357.10 1 180 9.3E-43 T 11-10-2018 DB34_03715 7dc6a87c5de43a84a35a09ebbe2c76f0 213 SUPERFAMILY SSF46689 2 60 8.72E-5 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB34_03455 db214e20b93c37a97d86bc3f75cb20b2 303 SUPERFAMILY SSF53448 11 295 6.47E-82 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB34_03455 db214e20b93c37a97d86bc3f75cb20b2 303 Gene3D G3DSA:3.90.550.10 9 301 6.8E-78 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB34_03455 db214e20b93c37a97d86bc3f75cb20b2 303 Pfam PF00483 Nucleotidyl transferase 12 248 1.2E-63 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 DB34_03455 db214e20b93c37a97d86bc3f75cb20b2 303 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 12 296 1.7E-134 T 11-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 DB34_05070 17fef2968710fcb67d3d9740950891ec 153 PRINTS PR00502 NUDIX hydrolase family signature 38 52 9.5E-6 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 DB34_05070 17fef2968710fcb67d3d9740950891ec 153 PRINTS PR00502 NUDIX hydrolase family signature 52 67 9.5E-6 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 DB34_05070 17fef2968710fcb67d3d9740950891ec 153 SUPERFAMILY SSF55811 7 128 9.75E-30 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DB34_05070 17fef2968710fcb67d3d9740950891ec 153 Pfam PF00293 NUDIX domain 11 134 1.3E-22 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DB34_05070 17fef2968710fcb67d3d9740950891ec 153 Gene3D G3DSA:3.90.79.10 2 145 1.7E-29 T 11-10-2018 DB34_03205 e187b6a164a2abda6b5db7c0102a1685 110 Pfam PF05534 HicB family 56 105 7.3E-18 T 11-10-2018 IPR008651 Uncharacterised protein family HicB DB34_03205 e187b6a164a2abda6b5db7c0102a1685 110 SUPERFAMILY SSF47598 69 107 1.33E-7 T 11-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 DB34_03205 e187b6a164a2abda6b5db7c0102a1685 110 SUPERFAMILY SSF143100 1 76 1.02E-5 T 11-10-2018 IPR035069 TTHA1013/TTHA0281-like DB34_13130 1dc7185d48bdedb88fe83f6285694194 182 Pfam PF10076 Uncharacterised protein conserved in bacteria (DUF2313) 15 181 2.1E-23 T 11-10-2018 IPR018755 Bacteriophage Mu-like, Gp48 DB34_12040 4a6d241fab91630c37f173dc732c3aca 106 SUPERFAMILY SSF54909 4 104 3.14E-28 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel DB34_12040 4a6d241fab91630c37f173dc732c3aca 106 Pfam PF03992 Antibiotic biosynthesis monooxygenase 4 80 1.5E-16 T 11-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain DB34_12040 4a6d241fab91630c37f173dc732c3aca 106 Gene3D G3DSA:3.30.70.100 3 106 2.5E-28 T 11-10-2018 DB34_02660 c88bd7fd1d919269927462be50c2045a 232 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 46 204 6.0E-26 T 11-10-2018 IPR005586 ABC-type transport auxiliary lipoprotein component DB34_02660 c88bd7fd1d919269927462be50c2045a 232 SUPERFAMILY SSF159594 44 213 1.23E-17 T 11-10-2018 DB34_02660 c88bd7fd1d919269927462be50c2045a 232 Gene3D G3DSA:3.40.50.10610 39 212 2.1E-5 T 11-10-2018 DB34_10050 36707ae7d1a2c57ab42e2a976166bf83 470 Gene3D G3DSA:3.50.50.60 154 275 4.5E-105 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_10050 36707ae7d1a2c57ab42e2a976166bf83 470 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 331 1.4E-61 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DB34_10050 36707ae7d1a2c57ab42e2a976166bf83 470 Gene3D G3DSA:3.30.390.30 350 470 2.3E-42 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 DB34_10050 36707ae7d1a2c57ab42e2a976166bf83 470 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 40 50 - T 11-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 DB34_10050 36707ae7d1a2c57ab42e2a976166bf83 470 SUPERFAMILY SSF51905 2 340 1.84E-62 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_10050 36707ae7d1a2c57ab42e2a976166bf83 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 412 427 2.3E-64 T 11-10-2018 DB34_10050 36707ae7d1a2c57ab42e2a976166bf83 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 2.3E-64 T 11-10-2018 DB34_10050 36707ae7d1a2c57ab42e2a976166bf83 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 434 454 2.3E-64 T 11-10-2018 DB34_10050 36707ae7d1a2c57ab42e2a976166bf83 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 311 318 2.3E-64 T 11-10-2018 DB34_10050 36707ae7d1a2c57ab42e2a976166bf83 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 2.3E-64 T 11-10-2018 DB34_10050 36707ae7d1a2c57ab42e2a976166bf83 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 145 154 2.3E-64 T 11-10-2018 DB34_10050 36707ae7d1a2c57ab42e2a976166bf83 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 181 206 2.3E-64 T 11-10-2018 DB34_10050 36707ae7d1a2c57ab42e2a976166bf83 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 347 368 2.3E-64 T 11-10-2018 DB34_10050 36707ae7d1a2c57ab42e2a976166bf83 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 269 283 2.3E-64 T 11-10-2018 DB34_10050 36707ae7d1a2c57ab42e2a976166bf83 470 Gene3D G3DSA:3.50.50.60 6 336 4.5E-105 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_10050 36707ae7d1a2c57ab42e2a976166bf83 470 PIRSF PIRSF000350 1 464 2.9E-80 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 DB34_10050 36707ae7d1a2c57ab42e2a976166bf83 470 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 6 469 3.9E-166 T 11-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 DB34_10050 36707ae7d1a2c57ab42e2a976166bf83 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.6E-35 T 11-10-2018 DB34_10050 36707ae7d1a2c57ab42e2a976166bf83 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 296 318 1.6E-35 T 11-10-2018 DB34_10050 36707ae7d1a2c57ab42e2a976166bf83 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 268 284 1.6E-35 T 11-10-2018 DB34_10050 36707ae7d1a2c57ab42e2a976166bf83 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 181 199 1.6E-35 T 11-10-2018 DB34_10050 36707ae7d1a2c57ab42e2a976166bf83 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 142 160 1.6E-35 T 11-10-2018 DB34_10050 36707ae7d1a2c57ab42e2a976166bf83 470 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 351 459 7.6E-37 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 DB34_10050 36707ae7d1a2c57ab42e2a976166bf83 470 SUPERFAMILY SSF55424 350 469 1.89E-39 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 DB34_01920 e8c4cf9fa802ecb77601b0b108cf30ad 339 Gene3D G3DSA:3.90.226.40 5 339 2.2E-100 T 11-10-2018 DB34_01920 e8c4cf9fa802ecb77601b0b108cf30ad 339 Pfam PF16113 Enoyl-CoA hydratase/isomerase 21 337 5.6E-97 T 11-10-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 DB34_01920 e8c4cf9fa802ecb77601b0b108cf30ad 339 SUPERFAMILY SSF52096 8 323 1.88E-57 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DB34_03335 b02aade9ebc0904ef108a6ebed45d7d2 225 Gene3D G3DSA:2.60.120.620 14 209 8.9E-10 T 11-10-2018 DB34_05030 be6f54e0211c2fb826cd465b26b6b4fa 122 Pfam PF05071 NADH ubiquinone oxidoreductase subunit NDUFA12 14 120 1.4E-23 T 11-10-2018 IPR007763 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 GO:0008137|GO:0009055|GO:0016020 Reactome: R-HSA-6799198 DB34_01445 ca6646908c5273664dd1a9a18e91e629 270 SMART SM00382 35 260 2.3E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_01445 ca6646908c5273664dd1a9a18e91e629 270 Gene3D G3DSA:3.40.50.300 10 268 1.3E-58 T 11-10-2018 DB34_01445 ca6646908c5273664dd1a9a18e91e629 270 SUPERFAMILY SSF52540 11 241 4.62E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_01445 ca6646908c5273664dd1a9a18e91e629 270 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB34_01445 ca6646908c5273664dd1a9a18e91e629 270 Pfam PF00005 ABC transporter 33 178 6.8E-23 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB34_08975 49109bf7fa73a472dd17a929b42c8ace 777 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 14 773 15.187 T 11-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 DB34_08975 49109bf7fa73a472dd17a929b42c8ace 777 Pfam PF03968 OstA-like protein 66 132 1.5E-6 T 11-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal DB34_08975 49109bf7fa73a472dd17a929b42c8ace 777 Pfam PF04453 Organic solvent tolerance protein 328 689 1.3E-62 T 11-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 DB34_08975 49109bf7fa73a472dd17a929b42c8ace 777 Gene3D G3DSA:2.60.450.10 56 182 1.8E-9 T 11-10-2018 DB34_00790 0bb1123085757b994e28fb7062904fb5 164 Gene3D G3DSA:3.30.420.10 13 162 1.5E-54 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DB34_00790 0bb1123085757b994e28fb7062904fb5 164 SUPERFAMILY SSF53098 18 156 1.52E-53 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily DB34_00790 0bb1123085757b994e28fb7062904fb5 164 Hamap MF_00042 Ribonuclease H [rnhA]. 15 163 31.34 T 11-10-2018 IPR022892 Ribonuclease HI GO:0004523 DB34_00790 0bb1123085757b994e28fb7062904fb5 164 Pfam PF00075 RNase H 17 154 2.5E-44 T 11-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 DB34_11200 b0d893a60a7850f1cca9cbb874209c4f 413 Pfam PF00764 Arginosuccinate synthase 14 401 1.4E-152 T 11-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DB34_11200 b0d893a60a7850f1cca9cbb874209c4f 413 SUPERFAMILY SSF69864 183 406 1.7E-89 T 11-10-2018 DB34_11200 b0d893a60a7850f1cca9cbb874209c4f 413 Hamap MF_00005 Argininosuccinate synthase [argG]. 10 408 51.893 T 11-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DB34_11200 b0d893a60a7850f1cca9cbb874209c4f 413 Gene3D G3DSA:3.40.50.620 11 180 4.5E-68 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DB34_11200 b0d893a60a7850f1cca9cbb874209c4f 413 Gene3D G3DSA:3.90.1260.10 184 412 4.8E-96 T 11-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DB34_11200 b0d893a60a7850f1cca9cbb874209c4f 413 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 16 24 - T 11-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DB34_11200 b0d893a60a7850f1cca9cbb874209c4f 413 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 124 135 - T 11-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DB34_11200 b0d893a60a7850f1cca9cbb874209c4f 413 SUPERFAMILY SSF52402 11 174 5.73E-48 T 11-10-2018 DB34_11200 b0d893a60a7850f1cca9cbb874209c4f 413 TIGRFAM TIGR00032 argG: argininosuccinate synthase 12 401 2.2E-141 T 11-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DB34_00040 6c43c0dbc2674b1daeadbfee9e089580 120 Pfam PF02699 Preprotein translocase subunit 24 102 3.3E-26 T 11-10-2018 IPR003849 Preprotein translocase YajC DB34_00040 6c43c0dbc2674b1daeadbfee9e089580 120 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 22 105 1.3E-24 T 11-10-2018 IPR003849 Preprotein translocase YajC DB34_00040 6c43c0dbc2674b1daeadbfee9e089580 120 PRINTS PR01853 Bacterial YajC preprotein translocase signature 23 43 2.1E-14 T 11-10-2018 IPR003849 Preprotein translocase YajC DB34_00040 6c43c0dbc2674b1daeadbfee9e089580 120 PRINTS PR01853 Bacterial YajC preprotein translocase signature 61 79 2.1E-14 T 11-10-2018 IPR003849 Preprotein translocase YajC DB34_00040 6c43c0dbc2674b1daeadbfee9e089580 120 SMART SM01323 21 105 7.0E-41 T 11-10-2018 IPR003849 Preprotein translocase YajC DB34_06560 7117471d52cceac6a9adf5eef4784f16 120 Pfam PF02325 YGGT family 33 105 1.4E-16 T 11-10-2018 IPR003425 CCB3/YggT GO:0016020 DB34_09980 b737918e771419dc28112d67716cbf0f 76 SUPERFAMILY SSF82657 1 76 6.15E-24 T 11-10-2018 IPR036065 BolA-like superfamily DB34_09980 b737918e771419dc28112d67716cbf0f 76 Gene3D G3DSA:3.30.300.90 3 76 4.4E-30 T 11-10-2018 DB34_09980 b737918e771419dc28112d67716cbf0f 76 Pfam PF01722 BolA-like protein 27 76 1.2E-15 T 11-10-2018 IPR002634 BolA protein DB34_09980 b737918e771419dc28112d67716cbf0f 76 PIRSF PIRSF003113 1 76 1.2E-20 T 11-10-2018 IPR002634 BolA protein DB34_11615 4512eb8d9573b8a01ad9613e1a0339ca 167 Gene3D G3DSA:1.10.10.60 5 78 2.9E-5 T 11-10-2018 DB34_11615 4512eb8d9573b8a01ad9613e1a0339ca 167 SUPERFAMILY SSF46689 3 49 1.09E-5 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB34_01410 fc1aa82d9b0e32571ded952c779b0ba1 410 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 236 249 - T 11-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 DB34_01410 fc1aa82d9b0e32571ded952c779b0ba1 410 Gene3D G3DSA:3.40.640.10 64 288 1.4E-119 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB34_01410 fc1aa82d9b0e32571ded952c779b0ba1 410 Gene3D G3DSA:3.90.1150.10 289 386 1.4E-119 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB34_01410 fc1aa82d9b0e32571ded952c779b0ba1 410 SUPERFAMILY SSF53383 3 389 2.48E-108 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB34_01410 fc1aa82d9b0e32571ded952c779b0ba1 410 Pfam PF00155 Aminotransferase class I and II 32 385 6.9E-58 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DB34_08965 d46d1478b26474d3eaaf32e845f51981 276 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 17 271 48.947 T 11-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 DB34_08965 d46d1478b26474d3eaaf32e845f51981 276 Pfam PF00398 Ribosomal RNA adenine dimethylase 18 263 2.5E-42 T 11-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm DB34_08965 d46d1478b26474d3eaaf32e845f51981 276 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 18 268 3.7E-70 T 11-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 DB34_08965 d46d1478b26474d3eaaf32e845f51981 276 Gene3D G3DSA:1.10.8.100 211 271 5.3E-18 T 11-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 DB34_08965 d46d1478b26474d3eaaf32e845f51981 276 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 49 77 - T 11-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 DB34_08965 d46d1478b26474d3eaaf32e845f51981 276 SUPERFAMILY SSF53335 13 270 1.13E-67 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB34_08965 d46d1478b26474d3eaaf32e845f51981 276 Gene3D G3DSA:3.40.50.150 2 208 1.1E-65 T 11-10-2018 DB34_08965 d46d1478b26474d3eaaf32e845f51981 276 SMART SM00650 33 205 1.0E-56 T 11-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 DB34_11445 f43d59dd1521bcf3ea0ebc66672a3297 191 SUPERFAMILY SSF56399 8 113 3.16E-14 T 11-10-2018 DB34_03365 636ecf5fcd4e4f44cfa6744f125e5452 243 SUPERFAMILY SSF52317 28 239 4.45E-37 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like DB34_03365 636ecf5fcd4e4f44cfa6744f125e5452 243 Gene3D G3DSA:3.40.50.880 2 243 4.5E-71 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like DB34_03365 636ecf5fcd4e4f44cfa6744f125e5452 243 Pfam PF07722 Peptidase C26 6 221 2.9E-59 T 11-10-2018 IPR011697 Peptidase C26 GO:0016787 Reactome: R-HSA-6798695 DB34_06195 f189e7d74ad3f0c1cc124f17fb3b4607 288 SUPERFAMILY SSF53850 90 285 4.07E-37 T 11-10-2018 DB34_06195 f189e7d74ad3f0c1cc124f17fb3b4607 288 Pfam PF03466 LysR substrate binding domain 90 281 6.8E-40 T 11-10-2018 IPR005119 LysR, substrate-binding DB34_06195 f189e7d74ad3f0c1cc124f17fb3b4607 288 Gene3D G3DSA:3.40.190.290 91 286 5.9E-33 T 11-10-2018 DB34_06195 f189e7d74ad3f0c1cc124f17fb3b4607 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 6.5E-15 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB34_06195 f189e7d74ad3f0c1cc124f17fb3b4607 288 SUPERFAMILY SSF46785 4 111 8.16E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB34_06195 f189e7d74ad3f0c1cc124f17fb3b4607 288 Gene3D G3DSA:1.10.10.10 2 83 1.4E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB34_01325 3167622f353c420f15eb8e26fe09e5df 303 Pfam PF02616 Segregation and condensation protein ScpA 55 277 7.6E-13 T 11-10-2018 IPR003768 Segregation and condensation protein A DB34_02470 17e9fbe4dcd3f20ec2693157746b759b 176 Pfam PF02643 Uncharacterized ACR, COG1430 66 168 5.0E-30 T 11-10-2018 IPR003795 Protein of unknown function DUF192 DB34_02470 17e9fbe4dcd3f20ec2693157746b759b 176 Gene3D G3DSA:2.60.120.1140 35 168 1.8E-41 T 11-10-2018 IPR038695 Saro_0823-like superfamily DB34_06220 93172ecef8602312db0a691a1d48dd9f 358 Pfam PF04577 Protein of unknown function (DUF563) 120 317 9.0E-45 T 11-10-2018 IPR007657 Glycosyltransferase 61 GO:0016757 DB34_00675 244e3b9bd592f17aaa9c9349e0ffafb0 344 Gene3D G3DSA:3.40.190.10 34 138 1.3E-6 T 11-10-2018 DB34_00675 244e3b9bd592f17aaa9c9349e0ffafb0 344 SUPERFAMILY SSF53850 47 279 1.14E-21 T 11-10-2018 DB34_00675 244e3b9bd592f17aaa9c9349e0ffafb0 344 Gene3D G3DSA:3.40.190.10 144 344 3.6E-11 T 11-10-2018 DB34_00675 244e3b9bd592f17aaa9c9349e0ffafb0 344 Pfam PF09084 NMT1/THI5 like 62 266 1.0E-10 T 11-10-2018 IPR015168 SsuA/THI5-like DB34_03480 68b627066bfd57753a9233e4a60eee1a 176 SUPERFAMILY SSF55120 1 160 3.52E-38 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DB34_03480 68b627066bfd57753a9233e4a60eee1a 176 Pfam PF00849 RNA pseudouridylate synthase 1 107 3.4E-21 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 DB34_03480 68b627066bfd57753a9233e4a60eee1a 176 Gene3D G3DSA:3.30.2350.10 1 144 7.6E-39 T 11-10-2018 DB34_12410 ee00ac0bea6813e07b32bc5a0d68d325 432 Gene3D G3DSA:2.40.50.140 1 72 6.4E-9 T 11-10-2018 DB34_12410 ee00ac0bea6813e07b32bc5a0d68d325 432 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 348 415 2.2E-8 T 11-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 DB34_12410 ee00ac0bea6813e07b32bc5a0d68d325 432 Gene3D G3DSA:3.40.1350.30 118 256 1.7E-67 T 11-10-2018 DB34_12410 ee00ac0bea6813e07b32bc5a0d68d325 432 SUPERFAMILY SSF53335 61 420 7.82E-44 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB34_12410 ee00ac0bea6813e07b32bc5a0d68d325 432 Gene3D G3DSA:3.40.50.150 73 415 1.7E-67 T 11-10-2018 DB34_11735 54bc74708a81a59c66ef02dbb3c8638c 437 Gene3D G3DSA:3.40.50.150 130 427 1.9E-79 T 11-10-2018 DB34_11735 54bc74708a81a59c66ef02dbb3c8638c 437 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 308 319 - T 11-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 DB34_11735 54bc74708a81a59c66ef02dbb3c8638c 437 Pfam PF01189 16S rRNA methyltransferase RsmB/F 237 425 2.0E-47 T 11-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 DB34_11735 54bc74708a81a59c66ef02dbb3c8638c 437 SUPERFAMILY SSF53335 125 427 3.07E-70 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB34_11735 54bc74708a81a59c66ef02dbb3c8638c 437 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 212 226 1.3E-27 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase DB34_11735 54bc74708a81a59c66ef02dbb3c8638c 437 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 309 321 1.3E-27 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase DB34_11735 54bc74708a81a59c66ef02dbb3c8638c 437 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 241 251 1.3E-27 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase DB34_11735 54bc74708a81a59c66ef02dbb3c8638c 437 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 359 375 1.3E-27 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase DB34_11735 54bc74708a81a59c66ef02dbb3c8638c 437 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 410 427 1.3E-27 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase DB34_07345 9fc8e24506d18ae5aba3e2d35558e637 767 Gene3D G3DSA:3.30.460.10 221 355 6.7E-42 T 11-10-2018 DB34_07345 9fc8e24506d18ae5aba3e2d35558e637 767 Gene3D G3DSA:3.10.20.30 413 483 2.9E-31 T 11-10-2018 IPR012675 Beta-grasp domain superfamily DB34_07345 9fc8e24506d18ae5aba3e2d35558e637 767 SMART SM00954 263 375 1.8E-62 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 DB34_07345 9fc8e24506d18ae5aba3e2d35558e637 767 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 52 761 2.1E-209 T 11-10-2018 IPR004811 RelA/SpoT family GO:0015969 DB34_07345 9fc8e24506d18ae5aba3e2d35558e637 767 Gene3D G3DSA:3.30.70.260 692 767 1.4E-8 T 11-10-2018 DB34_07345 9fc8e24506d18ae5aba3e2d35558e637 767 SMART SM00471 67 179 5.0E-9 T 11-10-2018 IPR003607 HD/PDEase domain DB34_07345 9fc8e24506d18ae5aba3e2d35558e637 767 Pfam PF13328 HD domain 52 202 2.9E-48 T 11-10-2018 IPR003607 HD/PDEase domain DB34_07345 9fc8e24506d18ae5aba3e2d35558e637 767 SUPERFAMILY SSF81301 207 424 2.13E-56 T 11-10-2018 DB34_07345 9fc8e24506d18ae5aba3e2d35558e637 767 Gene3D G3DSA:1.10.3210.10 25 217 1.8E-76 T 11-10-2018 DB34_07345 9fc8e24506d18ae5aba3e2d35558e637 767 SUPERFAMILY SSF81271 407 479 7.63E-22 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 DB34_07345 9fc8e24506d18ae5aba3e2d35558e637 767 SUPERFAMILY SSF109604 31 217 1.76E-68 T 11-10-2018 DB34_07345 9fc8e24506d18ae5aba3e2d35558e637 767 Pfam PF04607 Region found in RelA / SpoT proteins 263 374 4.4E-36 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 DB34_07345 9fc8e24506d18ae5aba3e2d35558e637 767 Pfam PF02824 TGS domain 421 479 4.5E-21 T 11-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 DB34_07345 9fc8e24506d18ae5aba3e2d35558e637 767 Pfam PF13291 ACT domain 692 764 2.2E-18 T 11-10-2018 IPR002912 ACT domain DB34_04825 4786d6d7ae2a27071534a4fabb6cb91a 64 Pfam PF07869 Protein of unknown function (DUF1656) 4 59 2.6E-17 T 11-10-2018 IPR012451 Protein of unknown function DUF1656 DB34_01490 48687c8a7deed568531dee3c78c779b0 477 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 11 441 3.3E-154 T 11-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 DB34_01490 48687c8a7deed568531dee3c78c779b0 477 PIRSF PIRSF006446 5 468 6.6E-188 T 11-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 DB34_06600 cca2ba6eb9d1ccd26ca473bd73241e84 130 Pfam PF05656 Protein of unknown function (DUF805) 12 129 1.4E-19 T 11-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 DB34_12300 c2ca7e56472d4d43ed34782a7e006fa0 237 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 17 164 5.5E-38 T 11-10-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_12300 c2ca7e56472d4d43ed34782a7e006fa0 237 Gene3D G3DSA:1.20.120.1200 3 166 1.8E-43 T 11-10-2018 DB34_07205 117179faaf35e94b81cb5016a85f222a 404 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 96 386 8.1E-41 T 11-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region DB34_07205 117179faaf35e94b81cb5016a85f222a 404 SUPERFAMILY SSF63829 59 401 5.23E-56 T 11-10-2018 DB34_07205 117179faaf35e94b81cb5016a85f222a 404 Gene3D G3DSA:2.120.10.30 68 403 3.9E-84 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like DB34_05155 59f9ca7a74b383fa89030fc92c57379c 126 Gene3D G3DSA:1.20.1740.10 23 125 6.8E-14 T 11-10-2018 DB34_05155 59f9ca7a74b383fa89030fc92c57379c 126 Pfam PF00324 Amino acid permease 32 119 1.8E-20 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 DB34_09170 5fab7fc107564bed333468be400a2a93 183 Pfam PF03729 Short repeat of unknown function (DUF308) 13 81 7.3E-12 T 11-10-2018 IPR005325 Protein of unknown function DUF308, membrane DB34_09170 5fab7fc107564bed333468be400a2a93 183 Pfam PF03729 Short repeat of unknown function (DUF308) 84 138 0.0016 T 11-10-2018 IPR005325 Protein of unknown function DUF308, membrane DB34_04920 7526dfb21bb8e30507782e6fc1f97c58 272 Gene3D G3DSA:3.40.830.10 5 271 4.1E-91 T 11-10-2018 DB34_04920 7526dfb21bb8e30507782e6fc1f97c58 272 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 46 253 4.0E-38 T 11-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 DB34_04920 7526dfb21bb8e30507782e6fc1f97c58 272 PIRSF PIRSF006157 8 272 3.6E-88 T 11-10-2018 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type GO:0008270|GO:0016701|GO:0055114 DB34_04920 7526dfb21bb8e30507782e6fc1f97c58 272 SUPERFAMILY SSF53213 11 267 1.44E-85 T 11-10-2018 DB34_04940 192bc27ae6798a47ed428a85c959cef2 167 Gene3D G3DSA:3.40.630.30 2 163 5.3E-30 T 11-10-2018 DB34_04940 192bc27ae6798a47ed428a85c959cef2 167 SUPERFAMILY SSF55729 7 151 2.66E-23 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase DB34_04940 192bc27ae6798a47ed428a85c959cef2 167 Pfam PF13302 Acetyltransferase (GNAT) domain 10 145 6.8E-17 T 11-10-2018 IPR000182 GNAT domain DB34_05280 ddbf5aaee211fca7ce8e780b9eb0c108 305 Gene3D G3DSA:3.40.50.300 5 289 6.0E-101 T 11-10-2018 DB34_05280 ddbf5aaee211fca7ce8e780b9eb0c108 305 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 40 270 1.4E-65 T 11-10-2018 IPR022488 Polyphosphate kinase-2-related DB34_05280 ddbf5aaee211fca7ce8e780b9eb0c108 305 TIGRFAM TIGR03709 PPK2_rel_1: polyphosphate:nucleotide phosphotransferase, PPK2 family 12 283 3.2E-104 T 11-10-2018 IPR022300 Polyphosphate:nucleotide phosphotransferase, PPK2 GO:0006797|GO:0016776 KEGG: 00190+2.7.4.1 DB34_05280 ddbf5aaee211fca7ce8e780b9eb0c108 305 SUPERFAMILY SSF52540 69 272 3.86E-17 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_05280 ddbf5aaee211fca7ce8e780b9eb0c108 305 PIRSF PIRSF028756 10 302 5.6E-76 T 11-10-2018 IPR016898 Polyphosphate kinase 2 KEGG: 00190+2.7.4.1 DB34_12590 31c0c4d8bf4a49a668b9ee814eb773df 154 Gene3D G3DSA:1.10.10.1550 57 112 6.8E-32 T 11-10-2018 DB34_12590 31c0c4d8bf4a49a668b9ee814eb773df 154 Pfam PF05443 ROS/MUCR transcriptional regulator protein 10 129 1.0E-49 T 11-10-2018 IPR008807 ROSMUCR transcriptional regulator GO:0003677|GO:0006355|GO:0008270 DB34_04290 e3d254a0f2f4194a2c1d9ad92c512a4f 111 Pfam PF09538 Protein of unknown function (FYDLN_acid) 1 98 6.9E-26 T 11-10-2018 IPR012644 Conserved hypothetical protein CHP02300, FYDLN acid DB34_04290 e3d254a0f2f4194a2c1d9ad92c512a4f 111 TIGRFAM TIGR02300 FYDLN_acid: TIGR02300 family protein 1 101 2.2E-11 T 11-10-2018 IPR012644 Conserved hypothetical protein CHP02300, FYDLN acid DB34_05290 381076b29bbc4e5c670b00c589a87f00 326 PIRSF PIRSF005052 11 286 1.9E-84 T 11-10-2018 IPR005337 RapZ-like family GO:0005524 DB34_05290 381076b29bbc4e5c670b00c589a87f00 326 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 11 302 37.234 T 11-10-2018 IPR005337 RapZ-like family GO:0005524 DB34_05290 381076b29bbc4e5c670b00c589a87f00 326 Pfam PF03668 P-loop ATPase protein family 13 277 3.1E-71 T 11-10-2018 IPR005337 RapZ-like family GO:0005524 DB34_05290 381076b29bbc4e5c670b00c589a87f00 326 SUPERFAMILY SSF52540 10 160 4.24E-12 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_06120 eae2dbfc8030eefba048fea3cb69cc21 182 Gene3D G3DSA:1.20.1260.10 4 174 2.3E-44 T 11-10-2018 IPR012347 Ferritin-like DB34_06120 eae2dbfc8030eefba048fea3cb69cc21 182 PIRSF PIRSF005900 13 177 7.1E-46 T 11-10-2018 IPR002177 DNA-binding protein Dps DB34_06120 eae2dbfc8030eefba048fea3cb69cc21 182 Pfam PF00210 Ferritin-like domain 38 170 1.9E-24 T 11-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 DB34_06120 eae2dbfc8030eefba048fea3cb69cc21 182 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 56 72 1.9E-6 T 11-10-2018 IPR002177 DNA-binding protein Dps DB34_06120 eae2dbfc8030eefba048fea3cb69cc21 182 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 152 170 1.9E-6 T 11-10-2018 IPR002177 DNA-binding protein Dps DB34_06120 eae2dbfc8030eefba048fea3cb69cc21 182 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 80 96 1.9E-6 T 11-10-2018 IPR002177 DNA-binding protein Dps DB34_06120 eae2dbfc8030eefba048fea3cb69cc21 182 SUPERFAMILY SSF47240 17 172 7.39E-42 T 11-10-2018 IPR009078 Ferritin-like superfamily DB34_05775 dc95b84090767d060010dd075ef7467c 337 Pfam PF08904 Domain of unknown function (DUF1849) 90 322 5.3E-71 T 11-10-2018 IPR015000 Protein of unknown function DUF1849 DB34_08275 08c7d44991f8676a530039df765ce2a5 253 Pfam PF00089 Trypsin 50 235 4.3E-8 T 11-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 DB34_08275 08c7d44991f8676a530039df765ce2a5 253 PRINTS PR00839 V8 serine protease family signature 45 62 7.6E-6 T 11-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 DB34_08275 08c7d44991f8676a530039df765ce2a5 253 PRINTS PR00839 V8 serine protease family signature 70 87 7.6E-6 T 11-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 DB34_08275 08c7d44991f8676a530039df765ce2a5 253 PRINTS PR00839 V8 serine protease family signature 189 205 7.6E-6 T 11-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 DB34_08275 08c7d44991f8676a530039df765ce2a5 253 Gene3D G3DSA:2.40.10.10 55 156 1.2E-25 T 11-10-2018 DB34_08275 08c7d44991f8676a530039df765ce2a5 253 SUPERFAMILY SSF50494 44 241 4.61E-22 T 11-10-2018 IPR009003 Peptidase S1, PA clan DB34_08275 08c7d44991f8676a530039df765ce2a5 253 Gene3D G3DSA:2.40.10.10 44 236 1.2E-25 T 11-10-2018 DB34_10220 61d8a8e71c5056b95b3eb4d9e79f1383 382 Gene3D G3DSA:3.40.630.30 40 382 6.4E-16 T 11-10-2018 DB34_10220 61d8a8e71c5056b95b3eb4d9e79f1383 382 SUPERFAMILY SSF55729 20 336 1.89E-14 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase DB34_03740 0962d8a9b9b7035786a2bb0bbd42a86c 89 Pfam PF00216 Bacterial DNA-binding protein 1 89 4.2E-24 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DB34_03740 0962d8a9b9b7035786a2bb0bbd42a86c 89 SMART SM00411 1 89 2.4E-13 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DB34_03740 0962d8a9b9b7035786a2bb0bbd42a86c 89 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 7.8E-7 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DB34_03740 0962d8a9b9b7035786a2bb0bbd42a86c 89 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 7.8E-7 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DB34_03740 0962d8a9b9b7035786a2bb0bbd42a86c 89 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 7.8E-7 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DB34_03740 0962d8a9b9b7035786a2bb0bbd42a86c 89 SUPERFAMILY SSF47729 1 89 3.09E-22 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 DB34_03740 0962d8a9b9b7035786a2bb0bbd42a86c 89 Gene3D G3DSA:4.10.520.10 1 89 5.5E-23 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 DB34_00945 2e31bef6839f9a82abe6a9fc09d4e5fb 90 Pfam PF01844 HNH endonuclease 26 64 1.8E-6 T 11-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 DB34_00945 2e31bef6839f9a82abe6a9fc09d4e5fb 90 Gene3D G3DSA:3.30.40.60 2 90 1.2E-5 T 11-10-2018 DB34_00945 2e31bef6839f9a82abe6a9fc09d4e5fb 90 SMART SM00507 12 62 1.4E-10 T 11-10-2018 IPR003615 HNH nuclease DB34_08890 7374665ff7b462492d1988a8624b2988 481 SMART SM00245 189 380 2.9E-78 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 DB34_08890 7374665ff7b462492d1988a8624b2988 481 Gene3D G3DSA:3.30.750.44 56 355 6.7E-96 T 11-10-2018 DB34_08890 7374665ff7b462492d1988a8624b2988 481 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 68 385 3.8E-101 T 11-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 DB34_08890 7374665ff7b462492d1988a8624b2988 481 Pfam PF13180 PDZ domain 116 196 4.3E-11 T 11-10-2018 IPR001478 PDZ domain GO:0005515 DB34_08890 7374665ff7b462492d1988a8624b2988 481 SMART SM00228 116 187 3.5E-16 T 11-10-2018 IPR001478 PDZ domain GO:0005515 DB34_08890 7374665ff7b462492d1988a8624b2988 481 Pfam PF03572 Peptidase family S41 213 379 2.1E-55 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 DB34_08890 7374665ff7b462492d1988a8624b2988 481 SUPERFAMILY SSF50156 104 199 2.2E-20 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 DB34_08890 7374665ff7b462492d1988a8624b2988 481 SUPERFAMILY SSF52096 57 395 1.57E-81 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DB34_08890 7374665ff7b462492d1988a8624b2988 481 Gene3D G3DSA:3.90.226.10 204 377 6.7E-96 T 11-10-2018 DB34_08890 7374665ff7b462492d1988a8624b2988 481 Gene3D G3DSA:2.30.42.10 116 203 6.7E-96 T 11-10-2018 DB34_11210 5cbe7008fc2c8b37fc4fedf46d6476e7 154 SUPERFAMILY SSF46626 26 132 5.02E-16 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DB34_11210 5cbe7008fc2c8b37fc4fedf46d6476e7 154 Gene3D G3DSA:1.10.760.10 25 150 6.4E-28 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DB34_11210 5cbe7008fc2c8b37fc4fedf46d6476e7 154 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 25 110 2.1E-8 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB34_10740 b6291886bc79434a1cb927f3521261ee 232 Gene3D G3DSA:2.60.120.200 42 232 2.2E-57 T 11-10-2018 DB34_10740 b6291886bc79434a1cb927f3521261ee 232 PIRSF PIRSF022704 36 232 1.9E-70 T 11-10-2018 IPR015987 Uncharacterised conserved protein UCP022704 DB34_10740 b6291886bc79434a1cb927f3521261ee 232 Pfam PF07081 Protein of unknown function (DUF1349) 48 221 3.6E-62 T 11-10-2018 IPR009784 Protein of unknown function DUF1349 DB34_10740 b6291886bc79434a1cb927f3521261ee 232 SUPERFAMILY SSF49899 47 220 8.71E-27 T 11-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily DB34_00010 38a40922a890c4e8ac70e228578c24d6 447 Gene3D G3DSA:1.10.3430.10 10 447 4.2E-146 T 11-10-2018 IPR029020 Ammonium/urea transporter DB34_00010 38a40922a890c4e8ac70e228578c24d6 447 Pfam PF00909 Ammonium Transporter Family 33 443 5.5E-126 T 11-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 DB34_00010 38a40922a890c4e8ac70e228578c24d6 447 TIGRFAM TIGR00836 amt: ammonium transporter 31 443 1.0E-137 T 11-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 DB34_00010 38a40922a890c4e8ac70e228578c24d6 447 ProSitePatterns PS01219 Ammonium transporters signature. 200 225 - T 11-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 DB34_00010 38a40922a890c4e8ac70e228578c24d6 447 SUPERFAMILY SSF111352 27 427 1.7E-130 T 11-10-2018 DB34_06175 d1edc7d542f8dbc6fa29e7a46e77a283 453 Pfam PF07642 Putative beta-barrel porin-2, OmpL-like. bbp2 71 432 4.8E-41 T 11-10-2018 IPR011486 Putative beta-barrel porin-2, OmpL-like. bbp2 DB34_03955 84d20071410336ebc9de9d4a341f1480 266 Pfam PF09250 Bifunctional DNA primase/polymerase, N-terminal 17 161 5.0E-23 T 11-10-2018 IPR015330 DNA primase/polymerase, bifunctional, N-terminal DB34_03955 84d20071410336ebc9de9d4a341f1480 266 SMART SM00943 17 162 5.4E-30 T 11-10-2018 IPR015330 DNA primase/polymerase, bifunctional, N-terminal DB34_03955 84d20071410336ebc9de9d4a341f1480 266 SUPERFAMILY SSF56747 13 191 1.37E-24 T 11-10-2018 DB34_03255 53821ff6a4876362f588091873b69cd0 364 Pfam PF01464 Transglycosylase SLT domain 53 161 1.7E-18 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 DB34_03255 53821ff6a4876362f588091873b69cd0 364 Pfam PF05036 Sporulation related domain 283 363 1.4E-5 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 DB34_03255 53821ff6a4876362f588091873b69cd0 364 Gene3D G3DSA:1.10.530.10 47 180 2.0E-29 T 11-10-2018 DB34_03255 53821ff6a4876362f588091873b69cd0 364 SUPERFAMILY SSF53955 40 172 2.09E-28 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily DB34_01775 26584b2377e479cca277cd11829eb123 249 Pfam PF01618 MotA/TolQ/ExbB proton channel family 108 210 1.0E-33 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel DB34_01775 26584b2377e479cca277cd11829eb123 249 TIGRFAM TIGR02797 exbB: tonB-system energizer ExbB 15 224 1.1E-92 T 11-10-2018 IPR014164 TonB-system energizer ExbB type-1 GO:0016020|GO:0022857|GO:0055085 DB34_02150 d5767cee1e354c302b8b6de54f140d86 660 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 41 660 32.3 T 11-10-2018 IPR023051 Potassium uptake protein, low affinity, Kup DB34_02150 d5767cee1e354c302b8b6de54f140d86 660 Pfam PF02705 K+ potassium transporter 50 582 2.4E-204 T 11-10-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 DB34_03890 6897018785c11be6e86f4c2c217efdc2 191 SUPERFAMILY SSF55811 13 188 2.03E-33 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DB34_03890 6897018785c11be6e86f4c2c217efdc2 191 Gene3D G3DSA:3.90.79.10 8 189 3.4E-38 T 11-10-2018 DB34_03890 6897018785c11be6e86f4c2c217efdc2 191 Pfam PF00293 NUDIX domain 60 152 3.2E-6 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DB34_01595 c6e7baac293d5b7f3c66081653b9cb51 237 SUPERFAMILY SSF51366 7 235 4.71E-65 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 DB34_01595 c6e7baac293d5b7f3c66081653b9cb51 237 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 60 73 - T 11-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DB34_01595 c6e7baac293d5b7f3c66081653b9cb51 237 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 7 236 34.221 T 11-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DB34_01595 c6e7baac293d5b7f3c66081653b9cb51 237 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 10 230 8.9E-40 T 11-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DB34_01595 c6e7baac293d5b7f3c66081653b9cb51 237 SMART SM00934 9 231 6.1E-80 T 11-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DB34_01595 c6e7baac293d5b7f3c66081653b9cb51 237 Gene3D G3DSA:3.20.20.70 5 237 4.6E-77 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB34_01595 c6e7baac293d5b7f3c66081653b9cb51 237 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 10 231 6.7E-55 T 11-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DB34_13415 39a5062bea05e96a991e6674fa374a6f 985 SUPERFAMILY SSF52540 400 891 3.64E-6 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_13415 39a5062bea05e96a991e6674fa374a6f 985 Pfam PF13307 Helicase C-terminal domain 806 948 1.2E-18 T 11-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 DB34_13415 39a5062bea05e96a991e6674fa374a6f 985 SUPERFAMILY SSF52540 250 944 1.42E-13 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_13415 39a5062bea05e96a991e6674fa374a6f 985 Gene3D G3DSA:3.40.50.300 221 483 7.3E-27 T 11-10-2018 DB34_13415 39a5062bea05e96a991e6674fa374a6f 985 Gene3D G3DSA:3.40.50.300 778 966 2.0E-24 T 11-10-2018 DB34_13415 39a5062bea05e96a991e6674fa374a6f 985 SMART SM00491 818 948 1.0E-8 T 11-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 DB34_12490 f9d35cbf0e85df966dbd0477e8cbf703 290 Pfam PF00293 NUDIX domain 123 232 4.0E-8 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DB34_12490 f9d35cbf0e85df966dbd0477e8cbf703 290 Gene3D G3DSA:3.90.79.10 109 265 1.9E-70 T 11-10-2018 DB34_12490 f9d35cbf0e85df966dbd0477e8cbf703 290 Gene3D G3DSA:3.30.750.160 26 196 1.9E-70 T 11-10-2018 DB34_12490 f9d35cbf0e85df966dbd0477e8cbf703 290 SUPERFAMILY SSF55811 100 257 1.82E-16 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DB34_06390 8d138c336bf7d940a4e44aee26b3e477 576 Pfam PF03354 Phage Terminase 59 223 7.6E-13 T 11-10-2018 IPR005021 Terminase large subunit, Lambdalikevirus-type DB34_06390 8d138c336bf7d940a4e44aee26b3e477 576 Pfam PF03354 Phage Terminase 287 554 6.2E-12 T 11-10-2018 IPR005021 Terminase large subunit, Lambdalikevirus-type DB34_06390 8d138c336bf7d940a4e44aee26b3e477 576 Gene3D G3DSA:3.40.50.300 52 239 2.4E-13 T 11-10-2018 DB34_06665 6461d95ec7aebf4308b9940879c7e98f 288 Gene3D G3DSA:3.90.25.10 142 264 7.2E-51 T 11-10-2018 DB34_06665 6461d95ec7aebf4308b9940879c7e98f 288 Gene3D G3DSA:3.40.50.720 4 271 7.2E-51 T 11-10-2018 DB34_06665 6461d95ec7aebf4308b9940879c7e98f 288 Pfam PF05368 NmrA-like family 3 223 7.7E-15 T 11-10-2018 IPR008030 NmrA-like domain Reactome: R-HSA-70635 DB34_06665 6461d95ec7aebf4308b9940879c7e98f 288 SUPERFAMILY SSF51735 3 240 3.57E-35 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily DB34_01110 87688dd149b4e2534a68493ccfa3d66e 253 Pfam PF03746 LamB/YcsF family 3 240 2.2E-87 T 11-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 DB34_01110 87688dd149b4e2534a68493ccfa3d66e 253 Gene3D G3DSA:3.20.20.370 1 252 1.4E-89 T 11-10-2018 DB34_01110 87688dd149b4e2534a68493ccfa3d66e 253 SUPERFAMILY SSF88713 1 248 4.08E-83 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 DB34_00525 1dbcb4fd89effc46945ac24c3422d647 331 Pfam PF05275 Copper resistance protein B precursor (CopB) 122 331 2.0E-75 T 11-10-2018 IPR007939 Copper resistance B precursor GO:0005507|GO:0006878|GO:0009279 DB34_00525 1dbcb4fd89effc46945ac24c3422d647 331 Gene3D G3DSA:2.40.128.130 184 328 2.1E-5 T 11-10-2018 IPR036709 Autotransporter beta-domain superfamily DB34_00525 1dbcb4fd89effc46945ac24c3422d647 331 SUPERFAMILY SSF103515 180 304 1.96E-7 T 11-10-2018 IPR036709 Autotransporter beta-domain superfamily DB34_10760 3345c2ad52a5fc733dbbd3176e1f7ef4 138 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 34 109 5.2E-13 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB34_10760 3345c2ad52a5fc733dbbd3176e1f7ef4 138 PRINTS PR00605 Class IC cytochrome C signature 87 109 1.4E-5 T 11-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 DB34_10760 3345c2ad52a5fc733dbbd3176e1f7ef4 138 PRINTS PR00605 Class IC cytochrome C signature 44 55 1.4E-5 T 11-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 DB34_10760 3345c2ad52a5fc733dbbd3176e1f7ef4 138 SUPERFAMILY SSF46626 20 119 3.15E-22 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DB34_10760 3345c2ad52a5fc733dbbd3176e1f7ef4 138 Gene3D G3DSA:1.10.760.10 19 137 4.5E-19 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DB34_10905 2765a0b2e065ef4ef9e80d1e88324145 451 SUPERFAMILY SSF103473 11 413 2.09E-50 T 11-10-2018 IPR036259 MFS transporter superfamily DB34_10905 2765a0b2e065ef4ef9e80d1e88324145 451 Pfam PF07690 Major Facilitator Superfamily 34 274 9.0E-19 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DB34_10905 2765a0b2e065ef4ef9e80d1e88324145 451 Gene3D G3DSA:1.20.1250.20 224 421 7.5E-21 T 11-10-2018 DB34_10905 2765a0b2e065ef4ef9e80d1e88324145 451 Gene3D G3DSA:1.20.1250.20 19 213 5.6E-19 T 11-10-2018 DB34_13715 88075fd354e64ca43aa3a353dbf8df46 290 SMART SM01040 23 116 5.7E-22 T 11-10-2018 IPR003497 BRO N-terminal domain DB34_13715 88075fd354e64ca43aa3a353dbf8df46 290 Pfam PF03374 Phage antirepressor protein KilAC domain 153 255 6.7E-16 T 11-10-2018 IPR005039 Antirepressor protein, C-terminal GO:0003677 DB34_13715 88075fd354e64ca43aa3a353dbf8df46 290 Pfam PF02498 BRO family, N-terminal domain 28 116 8.9E-14 T 11-10-2018 IPR003497 BRO N-terminal domain DB34_12180 70be3cce8118f71a16ca0db3a4fad49d 83 Gene3D G3DSA:1.10.1200.10 1 82 6.0E-14 T 11-10-2018 IPR036736 ACP-like superfamily DB34_12180 70be3cce8118f71a16ca0db3a4fad49d 83 Pfam PF00550 Phosphopantetheine attachment site 33 76 2.2E-8 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain DB34_12180 70be3cce8118f71a16ca0db3a4fad49d 83 SUPERFAMILY SSF47336 7 79 2.75E-13 T 11-10-2018 IPR036736 ACP-like superfamily DB34_02680 72103a17fe25ebc21effe00fb949063b 563 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 71 237 2.4E-7 T 11-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like DB34_08085 595df7e8beb7f005b36df702debb77b9 695 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 584 657 3.6E-7 T 11-10-2018 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal DB34_08085 595df7e8beb7f005b36df702debb77b9 695 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 30 313 1.4E-14 T 11-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD DB34_03575 7f180afda4448c47c738c9301c2dde47 260 SUPERFAMILY SSF52172 1 172 2.39E-27 T 11-10-2018 IPR011006 CheY-like superfamily DB34_03575 7f180afda4448c47c738c9301c2dde47 260 SMART SM00448 1 112 2.2E-11 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB34_03575 7f180afda4448c47c738c9301c2dde47 260 Gene3D G3DSA:3.40.50.2300 1 124 5.2E-25 T 11-10-2018 DB34_03575 7f180afda4448c47c738c9301c2dde47 260 Gene3D G3DSA:1.10.10.10 125 237 2.3E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB34_03575 7f180afda4448c47c738c9301c2dde47 260 Pfam PF00072 Response regulator receiver domain 3 113 6.9E-16 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB34_03575 7f180afda4448c47c738c9301c2dde47 260 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 220 2.1E-19 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DB34_03575 7f180afda4448c47c738c9301c2dde47 260 SMART SM00862 145 220 2.2E-19 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DB34_03035 7793ffd5c245b063da17a32a9dc04be1 72 Pfam PF09489 Probable cobalt transporter subunit (CbtB) 22 72 7.6E-14 T 11-10-2018 IPR012667 Cobalt transporter subunit CbtB, putative DB34_01495 90b339f7f0f3522dc7fa21156ce77dd5 343 SUPERFAMILY SSF54909 4 304 2.86E-102 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel DB34_01495 90b339f7f0f3522dc7fa21156ce77dd5 343 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 6 300 3.0E-85 T 11-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 DB34_01495 90b339f7f0f3522dc7fa21156ce77dd5 343 Pfam PF04261 Dyp-type peroxidase family 5 301 3.6E-93 T 11-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 DB34_09830 a2dbd25c1cdb59071bd190263742f402 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 77 93 5.8E-28 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DB34_09830 a2dbd25c1cdb59071bd190263742f402 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 55 75 5.8E-28 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DB34_09830 a2dbd25c1cdb59071bd190263742f402 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 221 245 5.8E-28 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DB34_09830 a2dbd25c1cdb59071bd190263742f402 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 145 168 5.8E-28 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DB34_09830 a2dbd25c1cdb59071bd190263742f402 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 190 211 5.8E-28 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DB34_09830 a2dbd25c1cdb59071bd190263742f402 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 96 112 5.8E-28 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DB34_09830 a2dbd25c1cdb59071bd190263742f402 275 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 96 109 - T 11-10-2018 IPR020583 Inositol monophosphatase, metal-binding site DB34_09830 a2dbd25c1cdb59071bd190263742f402 275 Gene3D G3DSA:3.40.190.80 158 272 6.8E-20 T 11-10-2018 DB34_09830 a2dbd25c1cdb59071bd190263742f402 275 Pfam PF00459 Inositol monophosphatase family 22 266 1.5E-50 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DB34_09830 a2dbd25c1cdb59071bd190263742f402 275 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 224 238 - T 11-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 DB34_09830 a2dbd25c1cdb59071bd190263742f402 275 SUPERFAMILY SSF56655 20 270 1.01E-65 T 11-10-2018 DB34_09830 a2dbd25c1cdb59071bd190263742f402 275 Gene3D G3DSA:3.30.540.10 7 155 1.8E-39 T 11-10-2018 DB34_09955 85c2cd9b5024e253d07b885ab5b43eb3 227 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 32 214 8.9E-9 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase DB34_09955 85c2cd9b5024e253d07b885ab5b43eb3 227 Gene3D G3DSA:3.60.10.10 27 223 9.7E-23 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily DB34_09955 85c2cd9b5024e253d07b885ab5b43eb3 227 SUPERFAMILY SSF56219 28 221 2.88E-24 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily DB34_10195 2f4013267c14c965d8b34c8301d841e0 225 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 22 176 7.0E-17 T 11-10-2018 DB34_10195 2f4013267c14c965d8b34c8301d841e0 225 Gene3D G3DSA:3.40.50.150 9 210 1.5E-30 T 11-10-2018 DB34_10195 2f4013267c14c965d8b34c8301d841e0 225 SUPERFAMILY SSF53335 7 193 3.61E-29 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB34_01100 e69c5a8cf5c53a282bf60267e490ce35 406 Pfam PF07690 Major Facilitator Superfamily 16 364 1.1E-43 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DB34_01100 e69c5a8cf5c53a282bf60267e490ce35 406 SUPERFAMILY SSF103473 7 401 8.63E-66 T 11-10-2018 IPR036259 MFS transporter superfamily DB34_01100 e69c5a8cf5c53a282bf60267e490ce35 406 Gene3D G3DSA:1.20.1250.20 205 403 2.8E-23 T 11-10-2018 DB34_01100 e69c5a8cf5c53a282bf60267e490ce35 406 Gene3D G3DSA:1.20.1250.20 2 199 2.5E-38 T 11-10-2018 DB34_00150 0ee15a128cf1227edea5f32b71cd14e0 113 Pfam PF13586 Transposase DDE domain 29 112 1.8E-21 T 11-10-2018 IPR025668 Transposase DDE domain DB34_11935 0ee15a128cf1227edea5f32b71cd14e0 113 Pfam PF13586 Transposase DDE domain 29 112 1.8E-21 T 11-10-2018 IPR025668 Transposase DDE domain DB34_13800 0ee15a128cf1227edea5f32b71cd14e0 113 Pfam PF13586 Transposase DDE domain 29 112 1.8E-21 T 11-10-2018 IPR025668 Transposase DDE domain DB34_11890 99cb0e3dbf484acf71664f1e835d31c8 758 Gene3D G3DSA:2.40.170.20 219 757 3.2E-76 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DB34_11890 99cb0e3dbf484acf71664f1e835d31c8 758 Gene3D G3DSA:2.170.130.10 101 218 4.9E-14 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily DB34_11890 99cb0e3dbf484acf71664f1e835d31c8 758 SUPERFAMILY SSF56935 73 756 2.02E-87 T 11-10-2018 DB34_11890 99cb0e3dbf484acf71664f1e835d31c8 758 Pfam PF07715 TonB-dependent Receptor Plug Domain 107 202 3.1E-10 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain DB34_11890 99cb0e3dbf484acf71664f1e835d31c8 758 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 107 756 1.3E-90 T 11-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 DB34_11890 99cb0e3dbf484acf71664f1e835d31c8 758 Pfam PF00593 TonB dependent receptor 280 755 3.3E-28 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel DB34_07005 bc6854ed5f7beadf9af01f8f44b36aa1 461 SUPERFAMILY SSF53098 125 398 1.06E-5 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily DB34_07005 bc6854ed5f7beadf9af01f8f44b36aa1 461 Pfam PF13701 Transposase DDE domain group 1 13 458 3.3E-165 T 11-10-2018 IPR025668 Transposase DDE domain DB34_03090 cfdf0269f365799ff3a26f7563976dbc 117 SUPERFAMILY SSF57783 34 113 1.26E-13 T 11-10-2018 DB34_03090 cfdf0269f365799ff3a26f7563976dbc 117 Gene3D G3DSA:3.90.580.10 19 115 1.1E-8 T 11-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 DB34_11275 f0b72d71ec5671b6c86d648cc4422eb7 102 Pfam PF14384 BrnA antitoxin of type II toxin-antitoxin system 27 98 4.9E-19 T 11-10-2018 IPR025528 BrnA antitoxin of type II toxin-antitoxin system DB34_04805 63a11aecb5518050a31fbe5af3febad2 371 Gene3D G3DSA:3.40.50.300 6 239 5.2E-28 T 11-10-2018 DB34_04805 63a11aecb5518050a31fbe5af3febad2 371 Pfam PF08402 TOBE domain 285 366 1.5E-4 T 11-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 DB34_04805 63a11aecb5518050a31fbe5af3febad2 371 SUPERFAMILY SSF52540 43 247 2.52E-27 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_04805 63a11aecb5518050a31fbe5af3febad2 371 SUPERFAMILY SSF50331 243 366 5.04E-7 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal DB34_04805 63a11aecb5518050a31fbe5af3febad2 371 Pfam PF00005 ABC transporter 25 167 2.2E-5 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB34_10775 975c31aff318e8074815709a2bef1b88 461 SUPERFAMILY SSF53098 158 398 1.06E-5 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily DB34_10775 975c31aff318e8074815709a2bef1b88 461 Pfam PF13701 Transposase DDE domain group 1 13 458 1.5E-164 T 11-10-2018 IPR025668 Transposase DDE domain DB34_13595 cc9e9ba42c3980943ceb4b54242d906a 239 Pfam PF04383 KilA-N domain 10 104 2.4E-19 T 11-10-2018 IPR018004 KilA, N-terminal/APSES-type HTH, DNA-binding DB34_13595 cc9e9ba42c3980943ceb4b54242d906a 239 SMART SM01252 8 106 1.0E-27 T 11-10-2018 IPR018004 KilA, N-terminal/APSES-type HTH, DNA-binding DB34_13595 cc9e9ba42c3980943ceb4b54242d906a 239 Pfam PF03374 Phage antirepressor protein KilAC domain 135 234 3.8E-18 T 11-10-2018 IPR005039 Antirepressor protein, C-terminal GO:0003677 DB34_12120 f2c7ff4e20e53262279be5e679016c3e 288 Gene3D G3DSA:3.20.20.150 1 241 1.1E-16 T 11-10-2018 DB34_12120 f2c7ff4e20e53262279be5e679016c3e 288 SUPERFAMILY SSF51658 20 192 1.93E-17 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily DB34_12120 f2c7ff4e20e53262279be5e679016c3e 288 Pfam PF01261 Xylose isomerase-like TIM barrel 21 190 7.3E-8 T 11-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain DB34_00600 df5d34095cee5ebfe7c800e867e9b6ab 257 Hamap MF_00689 Aspartate/glutamate leucyltransferase [bpt]. 7 235 38.679 T 11-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 DB34_00600 df5d34095cee5ebfe7c800e867e9b6ab 257 PIRSF PIRSF037208 1 248 7.4E-84 T 11-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 DB34_00600 df5d34095cee5ebfe7c800e867e9b6ab 257 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 107 229 3.5E-34 T 11-10-2018 IPR007472 N-end rule aminoacyl transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 DB34_00600 df5d34095cee5ebfe7c800e867e9b6ab 257 SUPERFAMILY SSF55729 81 238 1.64E-23 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase DB34_00600 df5d34095cee5ebfe7c800e867e9b6ab 257 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 18 87 4.4E-13 T 11-10-2018 IPR007471 N-end aminoacyl transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 DB34_12455 f08b2b7ac8da7d852c0129dc68af7b1f 432 Pfam PF04286 Protein of unknown function (DUF445) 61 425 2.1E-77 T 11-10-2018 IPR007383 Protein of unknown function DUF445 DB34_00155 121cb2999c37c291f8e9530ecc467d69 123 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 6 79 3.8E-26 T 11-10-2018 IPR025161 Putative transposase IS4/IS5 family DB34_13795 121cb2999c37c291f8e9530ecc467d69 123 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 6 79 3.8E-26 T 11-10-2018 IPR025161 Putative transposase IS4/IS5 family DB34_00235 8fefcc4700365a451e22a6aac37c274f 225 SUPERFAMILY SSF56349 100 203 2.59E-14 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DB34_00235 8fefcc4700365a451e22a6aac37c274f 225 Gene3D G3DSA:1.10.150.130 105 182 1.6E-28 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal DB34_00235 8fefcc4700365a451e22a6aac37c274f 225 Pfam PF13356 Arm DNA-binding domain 9 89 2.1E-10 T 11-10-2018 IPR025166 Integrase, DNA-binding domain DB34_00235 8fefcc4700365a451e22a6aac37c274f 225 Gene3D G3DSA:3.30.160.390 8 104 3.5E-15 T 11-10-2018 IPR038488 Integrase, DNA-binding domain superfamily DB34_03940 fbf99eb3c0b0327c6703de82bc0e1206 218 Pfam PF00239 Resolvase, N terminal domain 6 141 6.7E-28 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 DB34_03940 fbf99eb3c0b0327c6703de82bc0e1206 218 SUPERFAMILY SSF53041 5 142 2.49E-29 T 11-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 DB34_03940 fbf99eb3c0b0327c6703de82bc0e1206 218 Gene3D G3DSA:3.40.50.1390 2 147 5.8E-29 T 11-10-2018 DB34_03940 fbf99eb3c0b0327c6703de82bc0e1206 218 Pfam PF07508 Recombinase 173 217 9.4E-6 T 11-10-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 DB34_03940 fbf99eb3c0b0327c6703de82bc0e1206 218 SMART SM00857 5 142 1.0E-39 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 DB34_12295 c5a373521ca61089ec90bff7cbe2052f 107 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 13 102 6.4E-23 T 11-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like DB34_12295 c5a373521ca61089ec90bff7cbe2052f 107 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 8 107 18.6 T 11-10-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 DB34_06140 01516ee8049185828d5e9b5f77f64f18 161 Pfam PF05232 Chlorhexidine efflux transporter 16 79 2.5E-22 T 11-10-2018 IPR007896 Chlorhexidine efflux transporter DB34_06140 01516ee8049185828d5e9b5f77f64f18 161 Pfam PF05232 Chlorhexidine efflux transporter 86 148 7.9E-20 T 11-10-2018 IPR007896 Chlorhexidine efflux transporter DB34_12645 3e20fc228a86d0738b7d5225eb1950f7 233 Pfam PF02620 Uncharacterized ACR, COG1399 113 229 3.0E-15 T 11-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD DB34_01315 daa1bbbc88a21d83080f50ce63d63f57 240 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 58 76 1.3E-11 T 11-10-2018 DB34_01315 daa1bbbc88a21d83080f50ce63d63f57 240 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 39 58 1.3E-11 T 11-10-2018 DB34_01315 daa1bbbc88a21d83080f50ce63d63f57 240 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 19 39 1.3E-11 T 11-10-2018 DB34_01315 daa1bbbc88a21d83080f50ce63d63f57 240 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 20 98 7.4E-20 T 11-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 DB34_01315 daa1bbbc88a21d83080f50ce63d63f57 240 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 19 175 14.402 T 11-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 DB34_00875 604133ee58d0cbb57f81e25aa5641565 361 Pfam PF10150 Ribonuclease E/G family 165 282 3.3E-20 T 11-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 DB34_00875 604133ee58d0cbb57f81e25aa5641565 361 SUPERFAMILY SSF50249 39 99 8.57E-7 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB34_00875 604133ee58d0cbb57f81e25aa5641565 361 Gene3D G3DSA:2.40.50.140 33 102 3.2E-6 T 11-10-2018 DB34_10435 5e99a79d87b03712f5393fdd00b86715 486 TIGRFAM TIGR03173 pbuX: xanthine permease 26 440 8.5E-153 T 11-10-2018 IPR017588 Uric acid permease UacT-like GO:0016021|GO:0022857|GO:0055085 DB34_10435 5e99a79d87b03712f5393fdd00b86715 486 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 355 375 - T 11-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 DB34_10435 5e99a79d87b03712f5393fdd00b86715 486 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 19 438 1.3E-110 T 11-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 DB34_10435 5e99a79d87b03712f5393fdd00b86715 486 Pfam PF00860 Permease family 23 408 2.4E-102 T 11-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 DB34_01675 f1caea5d77e2107c267e651f3186de19 327 SMART SM00382 28 216 2.6E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain DB34_01675 f1caea5d77e2107c267e651f3186de19 327 Pfam PF00005 ABC transporter 19 167 5.0E-36 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB34_01675 f1caea5d77e2107c267e651f3186de19 327 SUPERFAMILY SSF52540 3 229 3.63E-78 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_01675 f1caea5d77e2107c267e651f3186de19 327 Gene3D G3DSA:3.40.50.300 1 295 9.4E-82 T 11-10-2018 DB34_01675 f1caea5d77e2107c267e651f3186de19 327 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB34_01850 0d6ca3d41c11dbeac343717331fdd368 277 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 45 271 2.1E-32 T 11-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 DB34_01850 0d6ca3d41c11dbeac343717331fdd368 277 Pfam PF02654 Cobalamin-5-phosphate synthase 21 269 2.6E-46 T 11-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 DB34_01850 0d6ca3d41c11dbeac343717331fdd368 277 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 277 40.22 T 11-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 DB34_08480 0067a954782ea1c03b6deb57453e9a35 285 Pfam PF12787 EcsC protein family 116 259 2.1E-24 T 11-10-2018 IPR024787 EcsC protein DB34_01485 7d30927ad40fddaee1096bd1bf523003 339 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 8 222 4.8E-41 T 11-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 DB34_01485 7d30927ad40fddaee1096bd1bf523003 339 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 8 328 1.4E-92 T 11-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 DB34_08990 8ca1d69292d67086180f10a6f5695a48 552 SUPERFAMILY SSF56935 168 548 2.63E-21 T 11-10-2018 DB34_03130 e9872bc25fcba4c361d1602b185e8f4f 67 Pfam PF13560 Helix-turn-helix domain 2 50 2.0E-7 T 11-10-2018 DB34_03130 e9872bc25fcba4c361d1602b185e8f4f 67 SUPERFAMILY SSF47413 2 42 1.99E-6 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DB34_03130 e9872bc25fcba4c361d1602b185e8f4f 67 Gene3D G3DSA:1.10.260.40 1 65 4.5E-18 T 11-10-2018 DB34_06240 abe56efe84b75f98331ace9b80407698 422 Gene3D G3DSA:1.20.1250.20 219 421 1.6E-23 T 11-10-2018 DB34_06240 abe56efe84b75f98331ace9b80407698 422 Gene3D G3DSA:1.20.1250.20 19 210 2.0E-29 T 11-10-2018 DB34_06240 abe56efe84b75f98331ace9b80407698 422 Pfam PF07690 Major Facilitator Superfamily 33 371 3.4E-31 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DB34_06240 abe56efe84b75f98331ace9b80407698 422 SUPERFAMILY SSF103473 1 418 1.57E-55 T 11-10-2018 IPR036259 MFS transporter superfamily DB34_10175 b782335e68f4206066f66c1267914dd8 178 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 2 156 1.7E-56 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DB34_10175 b782335e68f4206066f66c1267914dd8 178 SUPERFAMILY SSF55068 1 167 9.68E-71 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DB34_10175 b782335e68f4206066f66c1267914dd8 178 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 1 161 35.977 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DB34_10175 b782335e68f4206066f66c1267914dd8 178 Pfam PF01625 Peptide methionine sulfoxide reductase 3 157 7.8E-63 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DB34_10175 b782335e68f4206066f66c1267914dd8 178 Gene3D G3DSA:3.30.1060.10 1 166 4.4E-70 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DB34_09675 966012f439d6533d1a1897038582fcac 508 Pfam PF13520 Amino acid permease 29 460 2.3E-56 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DB34_09675 966012f439d6533d1a1897038582fcac 508 PIRSF PIRSF006060 9 508 7.2E-90 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DB34_09675 966012f439d6533d1a1897038582fcac 508 Gene3D G3DSA:1.20.1740.10 23 487 1.1E-113 T 11-10-2018 DB34_00845 b5abf3e21ddbcaf100e46f9b7b8584b2 299 SMART SM00646 133 287 9.8E-29 T 11-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 DB34_00845 b5abf3e21ddbcaf100e46f9b7b8584b2 299 SUPERFAMILY SSF53187 72 290 1.63E-47 T 11-10-2018 DB34_00845 b5abf3e21ddbcaf100e46f9b7b8584b2 299 Gene3D G3DSA:3.40.630.40 61 295 1.1E-62 T 11-10-2018 DB34_00845 b5abf3e21ddbcaf100e46f9b7b8584b2 299 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 73 287 4.2E-42 T 11-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 DB34_06985 69bf9e1c4d8df3e97c98cef00e40f575 274 Gene3D G3DSA:1.10.620.20 2 201 2.7E-20 T 11-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 DB34_06985 69bf9e1c4d8df3e97c98cef00e40f575 274 SUPERFAMILY SSF47240 1 251 4.06E-48 T 11-10-2018 IPR009078 Ferritin-like superfamily DB34_12865 1670a0c3b496755a87d2a8a1c3cf49da 210 SUPERFAMILY SSF55811 23 190 2.71E-23 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DB34_12865 1670a0c3b496755a87d2a8a1c3cf49da 210 Pfam PF12535 Hydrolase of X-linked nucleoside diphosphate N terminal 6 59 2.1E-26 T 11-10-2018 DB34_12865 1670a0c3b496755a87d2a8a1c3cf49da 210 Gene3D G3DSA:3.90.79.10 43 210 6.0E-29 T 11-10-2018 DB34_12865 1670a0c3b496755a87d2a8a1c3cf49da 210 Pfam PF00293 NUDIX domain 72 179 3.5E-10 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DB34_04370 4e304c983258bbe2d49b3843aed14ca0 409 SUPERFAMILY SSF48452 71 382 1.69E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB34_04370 4e304c983258bbe2d49b3843aed14ca0 409 Pfam PF13432 Tetratricopeptide repeat 117 160 2.5E-4 T 11-10-2018 DB34_07665 be3a3dc46a6925af3d4198be7c5ebd55 237 Gene3D G3DSA:1.10.10.10 16 80 9.8E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB34_07665 be3a3dc46a6925af3d4198be7c5ebd55 237 SUPERFAMILY SSF48008 87 220 8.11E-22 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DB34_07665 be3a3dc46a6925af3d4198be7c5ebd55 237 SUPERFAMILY SSF46785 13 84 2.03E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB34_07665 be3a3dc46a6925af3d4198be7c5ebd55 237 Gene3D G3DSA:1.20.120.530 85 231 2.8E-24 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DB34_07665 be3a3dc46a6925af3d4198be7c5ebd55 237 SMART SM00895 90 215 1.0E-12 T 11-10-2018 IPR011711 GntR, C-terminal DB34_07665 be3a3dc46a6925af3d4198be7c5ebd55 237 SMART SM00345 22 80 5.6E-16 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB34_07665 be3a3dc46a6925af3d4198be7c5ebd55 237 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 80 1.6E-16 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB34_07665 be3a3dc46a6925af3d4198be7c5ebd55 237 Pfam PF07729 FCD domain 93 214 6.7E-22 T 11-10-2018 IPR011711 GntR, C-terminal DB34_13745 c2b2800b41184ab0a8d8b5185c0f7e51 103 SUPERFAMILY SSF48295 3 64 1.15E-14 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 DB34_13745 c2b2800b41184ab0a8d8b5185c0f7e51 103 Pfam PF01527 Transposase 5 56 1.4E-9 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 DB34_09820 4ba40e6e75f51ffbd8daab6482874a2f 331 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 21 316 5.8E-67 T 11-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 DB34_09820 4ba40e6e75f51ffbd8daab6482874a2f 331 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 20 317 1.4E-84 T 11-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 DB34_09820 4ba40e6e75f51ffbd8daab6482874a2f 331 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 5 330 33.365 T 11-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 DB34_09820 4ba40e6e75f51ffbd8daab6482874a2f 331 SUPERFAMILY SSF52540 56 192 1.02E-8 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_01055 25c784fbedfc188d10443715745316a5 133 SUPERFAMILY SSF143744 2 129 4.32E-31 T 11-10-2018 IPR038084 GlcG-like domain superfamily DB34_01055 25c784fbedfc188d10443715745316a5 133 Gene3D G3DSA:3.30.450.150 1 132 1.8E-39 T 11-10-2018 IPR038084 GlcG-like domain superfamily DB34_01055 25c784fbedfc188d10443715745316a5 133 Pfam PF03928 Haem-degrading 2 127 1.3E-27 T 11-10-2018 IPR005624 Haem-degrading DB34_09395 9abe3248550f39d0c1bdde2801b89044 270 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 8 259 6.4E-20 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase DB34_09395 9abe3248550f39d0c1bdde2801b89044 270 Gene3D G3DSA:3.60.10.10 4 267 1.5E-63 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily DB34_09395 9abe3248550f39d0c1bdde2801b89044 270 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 31 40 - T 11-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 DB34_09395 9abe3248550f39d0c1bdde2801b89044 270 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 5 266 1.4E-54 T 11-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 DB34_09395 9abe3248550f39d0c1bdde2801b89044 270 SUPERFAMILY SSF56219 5 268 1.83E-70 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily DB34_00745 d71e2afc20750d528ed00dc7c9214219 236 Gene3D G3DSA:3.30.110.170 40 229 2.1E-18 T 11-10-2018 DB34_00745 d71e2afc20750d528ed00dc7c9214219 236 Gene3D G3DSA:3.30.70.2970 49 150 2.1E-18 T 11-10-2018 DB34_00745 d71e2afc20750d528ed00dc7c9214219 236 Pfam PF04402 Protein of unknown function (DUF541) 38 231 1.7E-24 T 11-10-2018 IPR007497 Protein of unknown function DUF541 DB34_05875 a8627ffdbd209a8429827126b6f09888 420 SUPERFAMILY SSF55205 1 419 1.14E-138 T 11-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 DB34_05875 a8627ffdbd209a8429827126b6f09888 420 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 417 5.4E-174 T 11-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DB34_05875 a8627ffdbd209a8429827126b6f09888 420 Gene3D G3DSA:3.65.10.10 6 415 8.8E-160 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 DB34_05875 a8627ffdbd209a8429827126b6f09888 420 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 408 6.7E-101 T 11-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 DB34_05875 a8627ffdbd209a8429827126b6f09888 420 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 418 44.722 T 11-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DB34_05875 a8627ffdbd209a8429827126b6f09888 420 Gene3D G3DSA:3.65.10.10 21 231 8.8E-160 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 DB34_13225 bb1cb10855991d28aad2689e219b96dd 100 Pfam PF02831 gpW 30 97 1.2E-18 T 11-10-2018 IPR004174 Head-to-tail joining protein W GO:0019058 DB34_13225 bb1cb10855991d28aad2689e219b96dd 100 SUPERFAMILY SSF64210 30 88 1.31E-9 T 11-10-2018 IPR036626 Head-to-tail joining protein W superfamily GO:0019058 DB34_13225 bb1cb10855991d28aad2689e219b96dd 100 Gene3D G3DSA:3.30.1580.10 28 95 7.4E-11 T 11-10-2018 IPR036626 Head-to-tail joining protein W superfamily GO:0019058 DB34_13635 330ab5d2d7c2a04f3472b72bdaa999c8 209 SUPERFAMILY SSF54060 27 111 4.47E-16 T 11-10-2018 DB34_13635 330ab5d2d7c2a04f3472b72bdaa999c8 209 Pfam PF13392 HNH endonuclease 63 103 5.5E-6 T 11-10-2018 IPR003615 HNH nuclease DB34_06370 3dff7e190d0e858df52b0e2f9f50f919 217 Pfam PF05135 Phage gp6-like head-tail connector protein 18 70 1.9E-4 T 11-10-2018 IPR021146 Phage gp6-like head-tail connector protein DB34_10945 74df66316536efedbbb76c3ece66a823 209 Pfam PF02570 Precorrin-8X methylmutase 13 205 3.6E-73 T 11-10-2018 IPR003722 Cobalamin biosynthesis precorrin-8X methylmutase CobH/CbiC GO:0009236|GO:0016993 DB34_10945 74df66316536efedbbb76c3ece66a823 209 SUPERFAMILY SSF63965 4 206 1.11E-71 T 11-10-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 DB34_10945 74df66316536efedbbb76c3ece66a823 209 Gene3D G3DSA:3.40.50.10230 1 207 4.1E-83 T 11-10-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 DB34_03015 d13ad200766ddb8b7869e299e967b454 273 Pfam PF03239 Iron permease FTR1 family 1 259 6.5E-31 T 11-10-2018 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0016020|GO:0033573|GO:0034755 DB34_02530 efb51c16004b2b56572efa9e29b92201 808 SUPERFAMILY SSF48452 609 744 8.1E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB34_04220 7e36436428efc156f6a4096d2f169102 484 SUPERFAMILY SSF56235 49 476 3.09E-55 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DB34_04220 7e36436428efc156f6a4096d2f169102 484 Pfam PF01019 Gamma-glutamyltranspeptidase 69 289 8.0E-33 T 11-10-2018 DB34_04220 7e36436428efc156f6a4096d2f169102 484 Pfam PF01019 Gamma-glutamyltranspeptidase 317 387 1.2E-4 T 11-10-2018 DB34_04220 7e36436428efc156f6a4096d2f169102 484 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 76 101 9.4E-16 T 11-10-2018 DB34_04220 7e36436428efc156f6a4096d2f169102 484 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 133 151 9.4E-16 T 11-10-2018 DB34_04220 7e36436428efc156f6a4096d2f169102 484 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 151 170 9.4E-16 T 11-10-2018 DB34_04220 7e36436428efc156f6a4096d2f169102 484 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 350 368 9.4E-16 T 11-10-2018 DB34_10800 27956dffe8ce0b565319629412d41c33 169 Gene3D G3DSA:3.40.50.11200 1 162 3.8E-21 T 11-10-2018 DB34_02030 ac484ef03cd605440413fe055f9990d7 261 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 27 240 8.1E-51 T 11-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase DB34_02030 ac484ef03cd605440413fe055f9990d7 261 Gene3D G3DSA:3.60.140.10 3 257 4.9E-82 T 11-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily DB34_02030 ac484ef03cd605440413fe055f9990d7 261 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 21 254 1.9E-68 T 11-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase DB34_02030 ac484ef03cd605440413fe055f9990d7 261 SUPERFAMILY SSF64438 5 255 1.63E-76 T 11-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic DB34_11840 2105fdc28b50d53a2ba2c4ad43768209 119 Pfam PF07519 Tannase and feruloyl esterase 1 112 3.4E-28 T 11-10-2018 IPR011118 Tannase/feruloyl esterase MetaCyc: PWY-6784 DB34_05870 23b669b61ba3ea76440e05e21b7fa59d 334 Pfam PF13536 Putative multidrug resistance efflux transporter 62 323 7.9E-80 T 11-10-2018 IPR032713 Putative multidrug resistance efflux transporter DB34_00085 a8f36f35d56019806631c80c3ab53da9 192 Pfam PF01965 DJ-1/PfpI family 6 184 9.4E-46 T 11-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 DB34_00085 a8f36f35d56019806631c80c3ab53da9 192 Gene3D G3DSA:3.40.50.880 3 192 9.2E-49 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like DB34_00085 a8f36f35d56019806631c80c3ab53da9 192 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 6 186 7.9E-53 T 11-10-2018 IPR006286 Deglycase PfpI DB34_00085 a8f36f35d56019806631c80c3ab53da9 192 SUPERFAMILY SSF52317 6 187 6.36E-46 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like DB34_03435 1e0596c2c247fcd7ad798d720e85891e 485 Gene3D G3DSA:3.30.2290.10 19 238 2.9E-12 T 11-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal DB34_03435 1e0596c2c247fcd7ad798d720e85891e 485 SUPERFAMILY SSF111283 27 484 7.19E-125 T 11-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 DB34_03435 1e0596c2c247fcd7ad798d720e85891e 485 Pfam PF01523 Putative modulator of DNA gyrase 46 336 2.3E-66 T 11-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 DB34_03435 1e0596c2c247fcd7ad798d720e85891e 485 PIRSF PIRSF004919 24 485 3.0E-134 T 11-10-2018 IPR025502 TldD DB34_02425 aff2d8a94a0326791f5ee0afbe0f4b61 374 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 151 166 1.2E-17 T 11-10-2018 DB34_02425 aff2d8a94a0326791f5ee0afbe0f4b61 374 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 283 298 1.2E-17 T 11-10-2018 DB34_02425 aff2d8a94a0326791f5ee0afbe0f4b61 374 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 298 314 1.2E-17 T 11-10-2018 DB34_02425 aff2d8a94a0326791f5ee0afbe0f4b61 374 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 333 349 1.2E-17 T 11-10-2018 DB34_02425 aff2d8a94a0326791f5ee0afbe0f4b61 374 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 1.2E-17 T 11-10-2018 DB34_02425 aff2d8a94a0326791f5ee0afbe0f4b61 374 Gene3D G3DSA:3.50.50.60 6 374 9.6E-127 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_02425 aff2d8a94a0326791f5ee0afbe0f4b61 374 Pfam PF01494 FAD binding domain 7 344 3.3E-20 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 DB34_02425 aff2d8a94a0326791f5ee0afbe0f4b61 374 SUPERFAMILY SSF54373 176 272 5.89E-5 T 11-10-2018 DB34_02425 aff2d8a94a0326791f5ee0afbe0f4b61 374 SUPERFAMILY SSF51905 6 366 5.36E-58 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB34_08045 46af033ba34f81e782256ed7fa80b920 167 Pfam PF04138 GtrA-like protein 20 138 1.8E-19 T 11-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 DB34_00335 9036fd20d6816ae9f833ce5241549e6e 90 Pfam PF10073 Uncharacterized protein conserved in bacteria (DUF2312) 18 89 3.7E-33 T 11-10-2018 IPR018753 Azospirillum phage Cd, Gp10 DB34_00335 9036fd20d6816ae9f833ce5241549e6e 90 Hamap MF_00797 UPF0335 protein . 13 90 20.824 T 11-10-2018 IPR018753 Azospirillum phage Cd, Gp10 DB34_11725 bf626e7e4ca560e4fe4062ce1e79c011 170 Pfam PF03734 L,D-transpeptidase catalytic domain 21 155 9.1E-8 T 11-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 DB34_10270 315187b447ac86a54589a8d8a1721dc2 125 Gene3D G3DSA:3.30.1330.60 11 122 1.6E-10 T 11-10-2018 IPR036737 OmpA-like domain superfamily DB34_10270 315187b447ac86a54589a8d8a1721dc2 125 SUPERFAMILY SSF103088 23 121 4.19E-15 T 11-10-2018 IPR036737 OmpA-like domain superfamily DB34_10270 315187b447ac86a54589a8d8a1721dc2 125 Pfam PF00691 OmpA family 27 98 3.2E-9 T 11-10-2018 IPR006665 OmpA-like domain DB34_10780 f57b0b3ae6f163be203003ec0f61bc52 107 Pfam PF13683 Integrase core domain 6 41 3.5E-6 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 DB34_01330 4d9326a23308a0d32a054aac22fff235 332 SUPERFAMILY SSF110997 251 331 9.29E-8 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 DB34_01330 4d9326a23308a0d32a054aac22fff235 332 Pfam PF05036 Sporulation related domain 251 331 5.3E-14 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 DB34_05760 ba200dc3fbc6d89ada19c422dec47bbe 195 Pfam PF07799 Protein of unknown function (DUF1643) 43 177 8.3E-42 T 11-10-2018 IPR012441 Protein of unknown function DUF1643 DB34_01970 1d5c9dfa0be41b9fc4de2f16cf71f3a5 307 Pfam PF10030 Uncharacterized protein conserved in bacteria (DUF2272) 106 295 1.6E-58 T 11-10-2018 IPR019262 Domain of unknown function DUF2272 DB34_00045 42ed33a7756707f42017f65a20e9d973 289 SUPERFAMILY SSF52540 41 205 3.06E-20 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_00045 42ed33a7756707f42017f65a20e9d973 289 Gene3D G3DSA:3.40.50.300 57 206 1.3E-5 T 11-10-2018 DB34_00045 42ed33a7756707f42017f65a20e9d973 289 Pfam PF05673 Protein of unknown function (DUF815) 32 285 8.6E-98 T 11-10-2018 IPR008533 Domain of unknown function DUF815 DB34_08385 d43079e54a91ce178c0844ec45aa0473 233 Gene3D G3DSA:3.40.50.300 27 218 6.0E-12 T 11-10-2018 DB34_08385 d43079e54a91ce178c0844ec45aa0473 233 SUPERFAMILY SSF52540 30 199 1.5E-12 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_07380 f07044322f9421b18d8cfdba48ba75cd 246 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 185 202 - T 11-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 DB34_07380 f07044322f9421b18d8cfdba48ba75cd 246 Pfam PF01255 Putative undecaprenyl diphosphate synthase 19 239 2.1E-78 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 DB34_07380 f07044322f9421b18d8cfdba48ba75cd 246 Gene3D G3DSA:3.40.1180.10 3 240 7.4E-94 T 11-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 DB34_07380 f07044322f9421b18d8cfdba48ba75cd 246 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 12 239 1.7E-84 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 DB34_07380 f07044322f9421b18d8cfdba48ba75cd 246 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 12 240 39.601 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 DB34_07380 f07044322f9421b18d8cfdba48ba75cd 246 SUPERFAMILY SSF64005 10 234 3.01E-85 T 11-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 DB34_11315 37668d3e70471664703c1965a390ac1c 360 Gene3D G3DSA:1.10.10.10 186 357 1.3E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB34_11315 37668d3e70471664703c1965a390ac1c 360 Pfam PF13884 Chaperone of endosialidase 200 264 2.6E-6 T 11-10-2018 IPR030392 Intramolecular chaperone auto-processing domain DB34_06825 af9379ab104f7e13f9e8ba72c807709f 168 Pfam PF13262 Protein of unknown function (DUF4054) 34 148 6.9E-25 T 11-10-2018 IPR025127 Protein of unknown function DUF4054 DB34_10555 322a47e873c867f2c2f63db14bd0cc78 394 Gene3D G3DSA:3.40.50.1820 31 241 9.9E-55 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold DB34_10555 322a47e873c867f2c2f63db14bd0cc78 394 Pfam PF03583 Secretory lipase 124 242 5.6E-14 T 11-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 DB34_10555 322a47e873c867f2c2f63db14bd0cc78 394 SUPERFAMILY SSF53474 61 362 2.49E-24 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold DB34_10555 322a47e873c867f2c2f63db14bd0cc78 394 Gene3D G3DSA:3.40.50.1820 289 391 4.4E-12 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold DB34_10555 322a47e873c867f2c2f63db14bd0cc78 394 PIRSF PIRSF029171 17 389 2.8E-119 T 11-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 DB34_05385 279a11123b6d3c7d088e1d36cf9e2441 548 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 76 496 3.3E-67 T 11-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 DB34_05385 279a11123b6d3c7d088e1d36cf9e2441 548 SUPERFAMILY SSF56317 315 524 3.01E-31 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily DB34_05385 279a11123b6d3c7d088e1d36cf9e2441 548 Pfam PF00795 Carbon-nitrogen hydrolase 315 516 2.1E-18 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 DB34_05385 279a11123b6d3c7d088e1d36cf9e2441 548 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 24 534 17.258 T 11-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 DB34_05385 279a11123b6d3c7d088e1d36cf9e2441 548 Gene3D G3DSA:3.60.110.10 287 517 8.0E-12 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily DB34_09050 dfa33f39e5b27a557e43260a74225e10 291 Pfam PF01062 Bestrophin, RFP-TM, chloride channel 14 267 1.2E-32 T 11-10-2018 IPR021134 Bestrophin/UPF0187 Reactome: R-HSA-2672351 DB34_02385 6b5a3606d23042478d0df7e06899ec7d 529 Pfam PF04966 Carbohydrate-selective porin, OprB family 141 509 5.1E-40 T 11-10-2018 IPR007049 Carbohydrate-selective porin OprB GO:0008643|GO:0015288|GO:0016021 DB34_02385 6b5a3606d23042478d0df7e06899ec7d 529 Gene3D G3DSA:2.40.160.180 112 511 4.3E-80 T 11-10-2018 IPR038673 Carbohydrate-selective porin OprB superfamily DB34_02065 a7cdd2cec28963960d96afde41bd5393 353 Gene3D G3DSA:3.30.460.20 16 161 5.8E-17 T 11-10-2018 DB34_02065 a7cdd2cec28963960d96afde41bd5393 353 SUPERFAMILY SSF143865 48 284 6.8E-23 T 11-10-2018 DB34_02065 a7cdd2cec28963960d96afde41bd5393 353 Pfam PF01544 CorA-like Mg2+ transporter protein 62 347 3.0E-53 T 11-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 DB34_02065 a7cdd2cec28963960d96afde41bd5393 353 Gene3D G3DSA:1.20.58.340 163 292 7.7E-10 T 11-10-2018 DB34_02065 a7cdd2cec28963960d96afde41bd5393 353 SUPERFAMILY SSF144083 288 349 6.15E-11 T 11-10-2018 DB34_05975 6aa82b940b90c5551870486a6f5f1207 498 Pfam PF01554 MatE 34 191 4.8E-18 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DB34_05975 6aa82b940b90c5551870486a6f5f1207 498 Pfam PF01554 MatE 249 405 6.5E-13 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DB34_05975 6aa82b940b90c5551870486a6f5f1207 498 PIRSF PIRSF006603 8 448 4.2E-64 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DB34_08415 b1ea8da8bc8d37e47e6d6ee75c2bb06f 731 Pfam PF04632 Fusaric acid resistance protein family 47 719 1.2E-158 T 11-10-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0022857|GO:0055085 DB34_07295 6db1d36f302e311ce7197c90455c4e89 214 SUPERFAMILY SSF51306 123 174 4.88E-5 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily DB34_07940 98b2b5fe58cc3ea10f86f83f8317197e 112 Pfam PF02627 Carboxymuconolactone decarboxylase family 38 105 8.0E-21 T 11-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 DB34_07940 98b2b5fe58cc3ea10f86f83f8317197e 112 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 42 88 3.5E-18 T 11-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 DB34_07940 98b2b5fe58cc3ea10f86f83f8317197e 112 Gene3D G3DSA:1.20.1290.10 1 112 1.4E-30 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 DB34_07940 98b2b5fe58cc3ea10f86f83f8317197e 112 SUPERFAMILY SSF69118 4 109 1.57E-27 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 DB34_06885 743e2d11ad08631ab95c51c1a1091d2b 411 Pfam PF04865 Baseplate J-like protein 91 362 2.9E-18 T 11-10-2018 IPR006949 Baseplate protein J-like DB34_13220 f54997be43db0cc41933857829ead6c3 549 TIGRFAM TIGR01539 portal_lambda: phage portal protein, lambda family 44 533 4.7E-70 T 11-10-2018 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 DB34_13220 f54997be43db0cc41933857829ead6c3 549 Pfam PF05136 Phage portal protein, lambda family 44 423 4.6E-102 T 11-10-2018 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 DB34_06670 caebf23f4ae2d3be61199b2f8147c956 144 Gene3D G3DSA:1.20.1270.180 20 130 1.2E-9 T 11-10-2018 DB34_06670 caebf23f4ae2d3be61199b2f8147c956 144 Pfam PF07007 Lysozyme inhibitor LprI 32 118 1.4E-13 T 11-10-2018 IPR009739 Lysozyme inhibitor LprI, N-terminal DB34_00460 4a9174297c0b6096bfec70c8ac240571 274 Pfam PF03618 Kinase/pyrophosphorylase 7 268 1.7E-88 T 11-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 DB34_00460 4a9174297c0b6096bfec70c8ac240571 274 Hamap MF_00921 Putative pyruvate, phosphate dikinase regulatory protein. 5 273 53.053 T 11-10-2018 IPR026565 Putative pyruvate, phosphate dikinase regulatory protein DB34_11130 cfac15d6553fd2d737d5c7faf6421ab5 217 Gene3D G3DSA:1.20.950.20 1 214 2.7E-67 T 11-10-2018 DB34_11130 cfac15d6553fd2d737d5c7faf6421ab5 217 SUPERFAMILY SSF81342 3 205 7.85E-49 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 DB34_11130 cfac15d6553fd2d737d5c7faf6421ab5 217 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 9 205 1.7E-57 T 11-10-2018 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 DB34_11130 cfac15d6553fd2d737d5c7faf6421ab5 217 Pfam PF01292 Prokaryotic cytochrome b561 14 186 5.8E-20 T 11-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 DB34_08200 4067020ffdc8254bc4fbdd9d07c6427a 299 Gene3D G3DSA:3.40.50.720 122 282 5.4E-60 T 11-10-2018 DB34_08200 4067020ffdc8254bc4fbdd9d07c6427a 299 PIRSF PIRSF001439 3 299 1.1E-46 T 11-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 DB34_08200 4067020ffdc8254bc4fbdd9d07c6427a 299 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 12 294 1.1E-31 T 11-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 DB34_08200 4067020ffdc8254bc4fbdd9d07c6427a 299 SUPERFAMILY SSF51735 1 296 5.6E-64 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily DB34_08200 4067020ffdc8254bc4fbdd9d07c6427a 299 Gene3D G3DSA:3.30.1780.10 20 293 5.4E-60 T 11-10-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 DB34_01640 17c6e9ccafad6ede852f55d445fc472d 484 Gene3D G3DSA:1.20.1730.10 33 484 1.0E-25 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily DB34_01640 17c6e9ccafad6ede852f55d445fc472d 484 Pfam PF00474 Sodium:solute symporter family 47 380 4.1E-19 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 DB34_09670 ece368c90361548e26b89296b8c92f88 282 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 278 15.578 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 DB34_09670 ece368c90361548e26b89296b8c92f88 282 Pfam PF02673 Bacitracin resistance protein BacA 6 272 4.0E-75 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 DB34_13670 9066dabcc06ed4dbe9764e876018004c 741 SUPERFAMILY SSF56349 420 607 3.83E-16 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DB34_13670 9066dabcc06ed4dbe9764e876018004c 741 Gene3D G3DSA:1.10.443.10 416 609 9.1E-15 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 DB34_13670 9066dabcc06ed4dbe9764e876018004c 741 Pfam PF00589 Phage integrase family 425 595 4.1E-11 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 DB34_08395 d8d88b0103b0afd63078f6c054616481 312 Gene3D G3DSA:1.25.40.10 30 274 8.2E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB34_02015 4b6e64b02686192d7f92884041002023 326 SUPERFAMILY SSF51735 2 320 8.85E-58 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily DB34_02015 4b6e64b02686192d7f92884041002023 326 Gene3D G3DSA:3.90.25.10 172 302 1.4E-111 T 11-10-2018 DB34_02015 4b6e64b02686192d7f92884041002023 326 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 320 4.1E-109 T 11-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 DB34_02015 4b6e64b02686192d7f92884041002023 326 Gene3D G3DSA:3.40.50.720 3 315 1.4E-111 T 11-10-2018 DB34_02015 4b6e64b02686192d7f92884041002023 326 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 321 46.077 T 11-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 DB34_02015 4b6e64b02686192d7f92884041002023 326 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 247 6.4E-36 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 DB34_00935 d4bda7ac4226b594d9137250142243f9 544 Gene3D G3DSA:3.40.50.300 44 245 8.9E-25 T 11-10-2018 DB34_00935 d4bda7ac4226b594d9137250142243f9 544 Pfam PF03354 Phage Terminase 72 529 7.8E-56 T 11-10-2018 IPR005021 Terminase large subunit, Lambdalikevirus-type DB34_02315 9105134c67e08b735b9a503b0df71e77 148 SUPERFAMILY SSF54197 20 141 7.65E-15 T 11-10-2018 IPR036265 HIT-like superfamily DB34_02315 9105134c67e08b735b9a503b0df71e77 148 Gene3D G3DSA:3.30.428.10 16 146 5.0E-20 T 11-10-2018 IPR036265 HIT-like superfamily DB34_08440 f314b523b0562f91f0a7f08d575e8299 193 Pfam PF00578 AhpC/TSA family 54 168 2.1E-12 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DB34_08440 f314b523b0562f91f0a7f08d575e8299 193 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 27 189 1.7E-38 T 11-10-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 DB34_08440 f314b523b0562f91f0a7f08d575e8299 193 SUPERFAMILY SSF52833 49 190 8.5E-30 T 11-10-2018 IPR036249 Thioredoxin-like superfamily DB34_08440 f314b523b0562f91f0a7f08d575e8299 193 Gene3D G3DSA:3.40.30.10 33 192 2.0E-33 T 11-10-2018 DB34_00695 a2352c2aa7e7d33ef61ca276b3ed5e52 187 Pfam PF14279 HNH endonuclease 93 141 4.9E-15 T 11-10-2018 IPR029471 HNH endonuclease 5 DB34_00695 a2352c2aa7e7d33ef61ca276b3ed5e52 187 Gene3D G3DSA:3.30.40.60 73 163 1.7E-21 T 11-10-2018 DB34_00695 a2352c2aa7e7d33ef61ca276b3ed5e52 187 SMART SM00507 80 133 7.6E-10 T 11-10-2018 IPR003615 HNH nuclease DB34_09475 2140cd3c00142e918f89a8ef50f2db8a 158 Pfam PF11911 Protein of unknown function (DUF3429) 5 153 3.1E-29 T 11-10-2018 IPR021836 Protein of unknown function DUF3429 DB34_00565 052b7ce500444a65a4ddca4c3c67afc0 400 Gene3D G3DSA:3.40.50.300 1 217 1.8E-63 T 11-10-2018 DB34_00565 052b7ce500444a65a4ddca4c3c67afc0 400 Pfam PF00271 Helicase conserved C-terminal domain 237 345 2.3E-28 T 11-10-2018 IPR001650 Helicase, C-terminal DB34_00565 052b7ce500444a65a4ddca4c3c67afc0 400 SMART SM00487 22 226 3.1E-50 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DB34_00565 052b7ce500444a65a4ddca4c3c67afc0 400 Pfam PF00270 DEAD/DEAH box helicase 27 200 4.4E-39 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DB34_00565 052b7ce500444a65a4ddca4c3c67afc0 400 Gene3D G3DSA:3.40.50.300 233 397 1.0E-45 T 11-10-2018 DB34_00565 052b7ce500444a65a4ddca4c3c67afc0 400 SUPERFAMILY SSF52540 34 357 7.23E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB34_00565 052b7ce500444a65a4ddca4c3c67afc0 400 SMART SM00490 264 345 2.3E-30 T 11-10-2018 IPR001650 Helicase, C-terminal DB34_11355 a17eb3bfaea3aa2fd6f16948122478aa 416 SUPERFAMILY SSF69279 22 173 2.59E-10 T 11-10-2018 DB34_03815 c6576690b4f1c03af06957d19fc38a30 138 Pfam PF13811 Domain of unknown function (DUF4186) 19 126 1.4E-47 T 11-10-2018 IPR020378 Protein of unknown function DUF4186 DB34_03815 c6576690b4f1c03af06957d19fc38a30 138 ProDom PD076485 YNEG CYTOPLASMIC ECS2130 STY1535 18 125 4.0E-34 T 11-10-2018 IPR020378 Protein of unknown function DUF4186 DB34_12875 6fecc1e7bed09454c74e6f26a15b776c 94 Pfam PF17209 Hfq protein 9 71 1.4E-29 T 11-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 DB34_12875 6fecc1e7bed09454c74e6f26a15b776c 94 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 2 67 26.189 T 11-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 DB34_12875 6fecc1e7bed09454c74e6f26a15b776c 94 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 8 67 9.5E-29 T 11-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 DB34_12875 6fecc1e7bed09454c74e6f26a15b776c 94 SUPERFAMILY SSF50182 8 70 2.81E-22 T 11-10-2018 IPR010920 LSM domain superfamily DB34_12875 6fecc1e7bed09454c74e6f26a15b776c 94 Gene3D G3DSA:2.30.30.100 1 75 2.6E-30 T 11-10-2018 DB34_13725 eb47c6c934c8cfedf164777d4d720797 375 Gene3D G3DSA:3.30.40.60 112 206 2.6E-21 T 11-10-2018 DB34_13725 eb47c6c934c8cfedf164777d4d720797 375 SMART SM00507 123 181 3.8E-14 T 11-10-2018 IPR003615 HNH nuclease DB34_13725 eb47c6c934c8cfedf164777d4d720797 375 Pfam PF01844 HNH endonuclease 136 185 1.2E-12 T 11-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 DB34_08830 de569790adec8d15dc60643578c72486 222 SUPERFAMILY SSF48403 95 157 8.55E-7 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily DB34_08830 de569790adec8d15dc60643578c72486 222 Gene3D G3DSA:1.25.40.20 51 176 2.6E-6 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily DB34_00915 799c944f8206e1a159bae8a27b3fcb6a 177 Pfam PF04586 Caudovirus prohead serine protease 20 161 1.2E-42 T 11-10-2018 IPR006433 Prohead protease DB34_00915 799c944f8206e1a159bae8a27b3fcb6a 177 TIGRFAM TIGR01543 proheadase_HK97: phage prohead protease, HK97 family 24 159 2.2E-31 T 11-10-2018 IPR006433 Prohead protease DB34_10530 e4f7d85cbb09aebbe2d51221aa97afaf 365 Pfam PF03601 Conserved hypothetical protein 698 39 343 6.5E-63 T 11-10-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 DB34_13155 e04fa6d90d74885b5d6b562bc1a4f19e 432 ProDom PD332323 CIRCULATION DNA PROTEIN TAIL/DNA PHAGE PROPHAGE VIRION FLUMU BACTERIOPHAGE MU-LIKE 16 123 4.0E-28 T 11-10-2018 IPR009826 DNA circulation, N-terminal DB34_13155 e04fa6d90d74885b5d6b562bc1a4f19e 432 Pfam PF07157 DNA circularisation protein N-terminus 12 98 6.4E-30 T 11-10-2018 IPR009826 DNA circulation, N-terminal DB34_09420 a88705434b44f501f66d23ac1bf94da7 87 SUPERFAMILY SSF54285 5 87 2.99E-17 T 11-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp DB34_09420 a88705434b44f501f66d23ac1bf94da7 87 Gene3D G3DSA:3.10.20.30 5 87 1.5E-20 T 11-10-2018 IPR012675 Beta-grasp domain superfamily DB34_09420 a88705434b44f501f66d23ac1bf94da7 87 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 5 87 2.2E-20 T 11-10-2018 DB34_09420 a88705434b44f501f66d23ac1bf94da7 87 Pfam PF02597 ThiS family 7 87 1.6E-15 T 11-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 DB34_08410 c2581c480db22468c29f417a16829ade 734 Pfam PF04632 Fusaric acid resistance protein family 36 716 2.6E-138 T 11-10-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0022857|GO:0055085 DB34_09835 fa2615917278a28c580668d6762146b2 281 Pfam PF04366 Las17-binding protein actin regulator 107 228 2.9E-22 T 11-10-2018 IPR007461 Ysc84 actin-binding domain DB34_11915 e6b8bb66fc2374b688fd090c163d98fc 537 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 11 511 4.0E-163 T 11-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 DB34_11915 e6b8bb66fc2374b688fd090c163d98fc 537 PIRSF PIRSF006446 4 325 1.4E-109 T 11-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 DB34_11915 e6b8bb66fc2374b688fd090c163d98fc 537 PIRSF PIRSF006446 360 535 1.4E-34 T 11-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 DB34_03270 ccceb6953f28fc2d6d25e11180834c56 231 Gene3D G3DSA:3.30.160.150 41 182 4.3E-21 T 11-10-2018 DB34_03270 ccceb6953f28fc2d6d25e11180834c56 231 Pfam PF04390 Lipopolysaccharide-assembly 50 172 4.8E-6 T 11-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 DB34_04680 7db06a70006b7e523960d997aaf44a2e 546 Pfam PF07396 Phosphate-selective porin O and P 175 546 1.9E-30 T 11-10-2018 IPR010870 Phosphate-selective porin O/P DB34_04680 7db06a70006b7e523960d997aaf44a2e 546 Gene3D G3DSA:2.40.160.10 133 546 9.5E-73 T 11-10-2018 IPR023614 Porin domain superfamily DB34_02610 7ff40bc3af79bbd1fb2edd5bd54b8b5f 381 Pfam PF07538 Clostridial hydrophobic W 199 231 4.6E-5 T 11-10-2018 IPR006637 Clostridial hydrophobic repeat DB34_02670 9c7f95881eb53b44866a6873b62e3863 489 Pfam PF04403 Paraquat-inducible protein A 75 226 8.2E-34 T 11-10-2018 IPR007498 Intermembrane transport protein PqiA-like DB34_02670 9c7f95881eb53b44866a6873b62e3863 489 Pfam PF04403 Paraquat-inducible protein A 301 455 1.8E-49 T 11-10-2018 IPR007498 Intermembrane transport protein PqiA-like DB34_00300 cd66552c599111fbc4f96323d8f981af 112 Gene3D G3DSA:1.10.1660.10 9 63 2.0E-6 T 11-10-2018 DB34_08170 5d3a0f4e4ec50d321d9269fd09a1a0b2 173 Pfam PF14016 Protein of unknown function (DUF4232) 33 149 3.5E-10 T 11-10-2018 IPR025326 Protein of unknown function DUF4232 DB34_01450 c93ab848b9455cbbc797cbf57be0fff6 487 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 2 473 45.12 T 11-10-2018 IPR003846 Uncharacterised protein family UPF0061 DB34_01450 c93ab848b9455cbbc797cbf57be0fff6 487 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 4 455 6.7E-128 T 11-10-2018 IPR003846 Uncharacterised protein family UPF0061 DB34_01290 3921769354e42e5dba58ff88c07cd7d8 71 Gene3D G3DSA:2.60.260.40 13 62 7.1E-18 T 11-10-2018 DB34_01290 3921769354e42e5dba58ff88c07cd7d8 71 Pfam PF10276 Zinc-finger domain 25 59 1.1E-14 T 11-10-2018 IPR019401 Zinc finger, CHCC-type Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB34_07595 e2ef9c01835c21d2c241b9c7234c5886 261 Pfam PF02405 Permease MlaE 47 255 2.0E-73 T 11-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 DB34_07595 e2ef9c01835c21d2c241b9c7234c5886 261 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 31 259 7.5E-71 T 11-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria DB34_09525 fb4520c3c1ff57a8e27fc3c51e85de46 481 Gene3D G3DSA:3.40.640.10 106 353 1.8E-141 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB34_09525 fb4520c3c1ff57a8e27fc3c51e85de46 481 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 48 409 4.3E-66 T 11-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 DB34_09525 fb4520c3c1ff57a8e27fc3c51e85de46 481 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 391 410 6.4E-15 T 11-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 DB34_09525 fb4520c3c1ff57a8e27fc3c51e85de46 481 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 79 98 6.4E-15 T 11-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 DB34_09525 fb4520c3c1ff57a8e27fc3c51e85de46 481 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 53 72 6.4E-15 T 11-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 DB34_09525 fb4520c3c1ff57a8e27fc3c51e85de46 481 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 117 136 6.4E-15 T 11-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 DB34_09525 fb4520c3c1ff57a8e27fc3c51e85de46 481 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 348 363 6.4E-15 T 11-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 DB34_09525 fb4520c3c1ff57a8e27fc3c51e85de46 481 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 12 31 6.4E-15 T 11-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 DB34_09525 fb4520c3c1ff57a8e27fc3c51e85de46 481 Gene3D G3DSA:3.90.1150.170 20 464 1.8E-141 T 11-10-2018 DB34_09525 fb4520c3c1ff57a8e27fc3c51e85de46 481 SUPERFAMILY SSF53383 8 472 5.25E-119 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB34_06680 ee630482fa7f3c3cb84d90d63496c63c 499 SUPERFAMILY SSF51294 159 294 2.35E-9 T 11-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 DB34_06680 ee630482fa7f3c3cb84d90d63496c63c 499 Pfam PF13403 Hint domain 158 297 3.9E-39 T 11-10-2018 IPR028992 Hedgehog/Intein (Hint) domain DB34_02820 0ab6b16dbf6c368773ca195b47249aed 211 SUPERFAMILY SSF52266 21 208 3.38E-36 T 11-10-2018 DB34_02820 0ab6b16dbf6c368773ca195b47249aed 211 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 26 196 5.1E-15 T 11-10-2018 IPR013830 SGNH hydrolase-type esterase domain DB34_02820 0ab6b16dbf6c368773ca195b47249aed 211 Gene3D G3DSA:3.40.50.1110 22 210 2.3E-27 T 11-10-2018 IPR036514 SGNH hydrolase superfamily DB34_05925 0bcdd1e7a5797a80e8ec72bb71809336 403 Pfam PF04055 Radical SAM superfamily 34 185 2.9E-13 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DB34_05925 0bcdd1e7a5797a80e8ec72bb71809336 403 Pfam PF11946 Domain of unknown function (DUF3463) 195 328 1.1E-58 T 11-10-2018 IPR022563 Domain of unknown function DUF3463 DB34_05925 0bcdd1e7a5797a80e8ec72bb71809336 403 SUPERFAMILY SSF102114 22 307 2.75E-49 T 11-10-2018 DB34_05925 0bcdd1e7a5797a80e8ec72bb71809336 403 Gene3D G3DSA:3.20.20.70 22 295 3.3E-29 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB34_05925 0bcdd1e7a5797a80e8ec72bb71809336 403 TIGRFAM TIGR03470 HpnH: hopanoid biosynthesis associated radical SAM protein HpnH 1 318 6.0E-167 T 11-10-2018 IPR017833 Hopanoid biosynthesis associated radical SAM protein HpnH DB34_00395 47dd106ab43a182a75a917b95931d357 387 Pfam PF01098 Cell cycle protein 23 367 2.7E-66 T 11-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DB34_02185 0fdaacc0ad31f98acb8411612e5f53ed 379 TIGRFAM TIGR03408 urea_trans_UrtC: urea ABC transporter, permease protein UrtC 40 355 4.7E-127 T 11-10-2018 IPR017778 ABC transporter, urea, permease protein, UrtC DB34_02185 0fdaacc0ad31f98acb8411612e5f53ed 379 Pfam PF02653 Branched-chain amino acid transport system / permease component 49 342 2.5E-35 T 11-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DB34_08980 aac37b48b80b07c32e727b745a39b59f 370 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 6 366 4.3E-78 T 11-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 DB34_08980 aac37b48b80b07c32e727b745a39b59f 370 Pfam PF03739 Predicted permease YjgP/YjgQ family 9 365 9.3E-57 T 11-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 DB34_05045 66dbd45ba3596a524663e2619ef4808e 195 Pfam PF09923 Uncharacterized protein conserved in bacteria (DUF2155) 46 134 1.9E-24 T 11-10-2018 IPR019225 Protein of unknown function DUF2155 DB34_11930 459203181e825e761576016f2011d415 123 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 6 79 3.8E-26 T 11-10-2018 IPR025161 Putative transposase IS4/IS5 family DB34_06940 73f57e0ad6ee17d6c9aee775359ee62d 461 SUPERFAMILY SSF53098 158 398 1.29E-5 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily DB34_06940 73f57e0ad6ee17d6c9aee775359ee62d 461 Pfam PF13701 Transposase DDE domain group 1 13 458 1.7E-164 T 11-10-2018 IPR025668 Transposase DDE domain DB34_10655 84fe0bbb7a872d3aa81118d1086d181d 715 Pfam PF05170 AsmA family 248 547 1.5E-24 T 11-10-2018 IPR007844 AsmA DB34_13205 a0ff5de2874a6f537109c26e7a89c94e 129 Pfam PF02924 Bacteriophage lambda head decoration protein D 25 113 5.5E-22 T 11-10-2018 IPR004195 Head decoration protein D DB34_04515 5fbf088947865452395698f943731174 365 Pfam PF00953 Glycosyl transferase family 4 105 247 9.1E-27 T 11-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 DB34_00765 ab565f5d9c1f91c7fceceff30af2873b 287 SUPERFAMILY SSF48452 139 270 4.18E-16 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB34_00765 ab565f5d9c1f91c7fceceff30af2873b 287 SMART SM00028 234 267 3.9 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB34_00765 ab565f5d9c1f91c7fceceff30af2873b 287 SMART SM00028 200 233 0.23 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB34_00765 ab565f5d9c1f91c7fceceff30af2873b 287 Gene3D G3DSA:1.25.40.10 87 286 4.4E-18 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB34_05855 5f3b6be5f4ec6051714761810f4a32e0 247 Pfam PF02754 Cysteine-rich domain 4 83 3.2E-12 T 11-10-2018 IPR004017 Cysteine-rich domain DB34_05855 5f3b6be5f4ec6051714761810f4a32e0 247 Pfam PF02754 Cysteine-rich domain 128 221 2.6E-11 T 11-10-2018 IPR004017 Cysteine-rich domain DB34_05020 dee9b4d495ed94acd0815d55f2b7474a 153 Pfam PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease 5 147 5.0E-39 T 11-10-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like DB34_05020 dee9b4d495ed94acd0815d55f2b7474a 153 SUPERFAMILY SSF55298 1 152 4.4E-55 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 DB34_05020 dee9b4d495ed94acd0815d55f2b7474a 153 Gene3D G3DSA:3.30.1330.40 1 152 2.1E-61 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 DB34_06890 8ba6a568b94aab77c8a445b501f431cf 192 Pfam PF11041 Protein of unknown function (DUF2612) 5 188 9.1E-66 T 11-10-2018 IPR021283 Protein of unknown function DUF2612 DB34_04785 1543211deb33dfab07f413afb74b26f8 225 Gene3D G3DSA:3.30.2010.10 125 218 3.5E-16 T 11-10-2018 DB34_04785 1543211deb33dfab07f413afb74b26f8 225 Pfam PF01863 Protein of unknown function DUF45 23 216 2.1E-47 T 11-10-2018 IPR002725 Protein of unknown function DUF45 DB34_05510 41bab6811d99074d27e8522399db95ee 474 Pfam PF13403 Hint domain 130 268 1.2E-37 T 11-10-2018 IPR028992 Hedgehog/Intein (Hint) domain DB34_05510 41bab6811d99074d27e8522399db95ee 474 SUPERFAMILY SSF51294 130 265 3.92E-9 T 11-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 DB34_06105 06685bc514cea85c3549152f95541b66 145 Pfam PF13430 Domain of unknown function (DUF4112) 32 134 1.6E-33 T 11-10-2018 IPR025187 Protein of unknown function DUF4112 DB34_12205 40651c226ffef251e8b55f1d4dc11220 399 Pfam PF03739 Predicted permease YjgP/YjgQ family 25 376 7.6E-56 T 11-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 DB34_02650 530f66723c92d2211453e907081f3a4a 174 Pfam PF02674 Colicin V production protein 4 143 1.6E-28 T 11-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 DB34_09810 fc62ed42b32d2eb236e2872740fe0a7a 162 Pfam PF06073 Bacterial protein of unknown function (DUF934) 48 152 8.2E-35 T 11-10-2018 IPR008318 Uncharacterised conserved protein UCP030820 DB34_09810 fc62ed42b32d2eb236e2872740fe0a7a 162 PIRSF PIRSF030820 3 160 8.2E-36 T 11-10-2018 IPR008318 Uncharacterised conserved protein UCP030820 DB34_02810 00c39ed4bfd7c7d49b705de5c08ec2dc 342 Pfam PF13515 Fusaric acid resistance protein-like 29 151 3.4E-15 T 11-10-2018 DB34_00210 88b7fea80e623acaebc2361cb04057af 452 Pfam PF00860 Permease family 27 383 3.4E-22 T 11-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 DB34_06130 8be4e3647aecce52fdf7bd105cbaf469 77 Gene3D G3DSA:1.10.10.1100 1 55 1.5E-12 T 11-10-2018 DB34_06130 8be4e3647aecce52fdf7bd105cbaf469 77 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 50 1.3E-7 T 11-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain DB34_13535 9eb760e9c2e7523ce18efec4be26fb21 268 Pfam PF13391 HNH endonuclease 169 220 8.6E-7 T 11-10-2018 IPR003615 HNH nuclease DB34_00105 e15403016c2fbb8d71161d0fffe36ab8 382 PIRSF PIRSF033093 1 379 6.5E-78 T 11-10-2018 IPR014577 Uncharacterised conserved protein UCP033093, metallophosphoesterase-type DB34_00105 e15403016c2fbb8d71161d0fffe36ab8 382 SUPERFAMILY SSF56300 1 296 1.03E-31 T 11-10-2018 DB34_00105 e15403016c2fbb8d71161d0fffe36ab8 382 Gene3D G3DSA:3.60.21.10 1 239 1.1E-25 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like DB34_00105 e15403016c2fbb8d71161d0fffe36ab8 382 Pfam PF00149 Calcineurin-like phosphoesterase 1 95 9.0E-9 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 DB34_09800 1f68645020e81ced2ddab188c793af12 113 Pfam PF11011 Protein of unknown function (DUF2849) 14 99 8.1E-28 T 11-10-2018 IPR021270 Protein of unknown function DUF2849 DB34_07385 ab05325cb0ad29a4307c4b3eb6b0881a 278 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 212 238 - T 11-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 DB34_07385 ab05325cb0ad29a4307c4b3eb6b0881a 278 Pfam PF01148 Cytidylyltransferase family 17 250 5.2E-44 T 11-10-2018 DB34_10670 001aa8e4b3273cc658689991c613e00c 58 Pfam PF01609 Transposase DDE domain 3 57 7.8E-8 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 DB34_04645 e7707d4afb118c840643f4af3b1e10a7 171 Pfam PF04519 Polymer-forming cytoskeletal 48 143 8.0E-19 T 11-10-2018 IPR007607 Bactofilin A/B DB34_02600 24e368d7dbb453b73959a6543da1e1a3 196 SUPERFAMILY SSF159594 28 188 1.44E-17 T 11-10-2018 DB34_02600 24e368d7dbb453b73959a6543da1e1a3 196 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 30 188 3.2E-25 T 11-10-2018 IPR005586 ABC-type transport auxiliary lipoprotein component DB34_02600 24e368d7dbb453b73959a6543da1e1a3 196 Gene3D G3DSA:3.40.50.10610 19 174 4.5E-6 T 11-10-2018 DB34_01225 3ad6e7a59f3a16d9c5145315d1212a90 885 Pfam PF13403 Hint domain 536 675 6.9E-44 T 11-10-2018 IPR028992 Hedgehog/Intein (Hint) domain DB34_01225 3ad6e7a59f3a16d9c5145315d1212a90 885 Gene3D G3DSA:2.170.16.10 535 661 2.4E-5 T 11-10-2018 DB34_01225 3ad6e7a59f3a16d9c5145315d1212a90 885 SUPERFAMILY SSF51294 536 661 1.78E-11 T 11-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 DB34_08500 70ecd2444de29c1b471f7a5f34aedb31 209 SUPERFAMILY SSF51004 53 184 1.96E-5 T 11-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily DB34_04405 7635cd0d7aee5729d4e16a505534485a 359 Hamap MF_01665 Heme A synthase [ctaA]. 16 355 24.338 T 11-10-2018 IPR023754 Heme A synthase, type 2 GO:0006784|GO:0016020|GO:0016627|GO:0055114 Reactome: R-HSA-189451 DB34_04405 7635cd0d7aee5729d4e16a505534485a 359 Pfam PF02628 Cytochrome oxidase assembly protein 22 345 8.8E-98 T 11-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 DB34_04795 2323eaa949dd7064540731b0559b7af7 145 SUPERFAMILY SSF161098 14 140 7.72E-6 T 11-10-2018 IPR035906 MetI-like superfamily DB34_07525 e230df86942e3aeae605c70b2adcf99d 359 Pfam PF03968 OstA-like protein 55 214 9.2E-8 T 11-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal DB34_12460 7c80ee55c2784682e277f066d7fd8f34 932 Pfam PF00311 Phosphoenolpyruvate carboxylase 410 554 1.8E-11 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 DB34_12460 7c80ee55c2784682e277f066d7fd8f34 932 SUPERFAMILY SSF51621 47 869 1.3E-105 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 DB34_01365 8318834a159b092e278eef4a8797c101 345 Pfam PF06258 Mitochondrial fission ELM1 22 264 2.5E-26 T 11-10-2018 IPR009367 Mitochondrial fission protein ELM1-like DB34_10920 d2a4056ba09944db65ad65686463bd20 124 Pfam PF01890 Cobalamin synthesis G C-terminus 2 120 5.9E-16 T 11-10-2018 IPR002750 CobE/GbiG C-terminal domain GO:0009236 DB34_10920 d2a4056ba09944db65ad65686463bd20 124 Gene3D G3DSA:3.30.420.180 1 123 5.7E-27 T 11-10-2018 IPR036518 CobE/GbiG C-terminal domain superfamily GO:0009236 DB34_10920 d2a4056ba09944db65ad65686463bd20 124 SUPERFAMILY SSF159664 1 122 5.76E-24 T 11-10-2018 IPR036518 CobE/GbiG C-terminal domain superfamily GO:0009236 DB34_05565 5b68e59cdc19e69b50ebbfc2c9bb2b18 63 Pfam PF07866 Protein of unknown function (DUF1653) 4 55 2.2E-5 T 11-10-2018 IPR023387 DUF1653-like domain DB34_04915 589b5ffaea1d08873ad629e65484efae 202 SMART SM00867 35 199 3.5E-59 T 11-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like DB34_04915 589b5ffaea1d08873ad629e65484efae 202 SUPERFAMILY SSF101874 33 200 1.57E-49 T 11-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily DB34_04915 589b5ffaea1d08873ad629e65484efae 202 Pfam PF04264 YceI-like domain 36 196 3.8E-37 T 11-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like DB34_04915 589b5ffaea1d08873ad629e65484efae 202 Gene3D G3DSA:2.40.128.110 33 200 2.9E-46 T 11-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily DB34_07065 66e994de404bf5649d809afb4addc047 537 Pfam PF01384 Phosphate transporter family 77 526 1.0E-75 T 11-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 DB34_07890 53d31d20149300388e2872bc6d3bd269 113 Pfam PF07372 Protein of unknown function (DUF1491) 7 105 1.2E-28 T 11-10-2018 IPR009964 Protein of unknown function DUF1491 DB34_07890 53d31d20149300388e2872bc6d3bd269 113 Gene3D G3DSA:3.40.1530.20 5 110 2.6E-26 T 11-10-2018 DB34_07840 d45672426e58e62732313047bd853cf3 176 Pfam PF11233 Protein of unknown function (DUF3035) 31 157 3.6E-34 T 11-10-2018 IPR021395 Protein of unknown function DUF3035 DB34_04410 3c1c87221d459076ced97158055e0871 259 Pfam PF09335 SNARE associated Golgi protein 105 221 3.7E-18 T 11-10-2018 IPR032816 SNARE associated Golgi protein DB34_02050 bc606a13f055eea04da2840c1ccb2f75 287 Pfam PF01061 ABC-2 type transporter 47 247 3.2E-12 T 11-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 DB34_09390 13260c012ae1023c128255ec6c30564b 1409 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 1047 1409 2.0E-52 T 11-10-2018 IPR007452 Translocation and assembly module TamB DB34_06015 30dfa52e35b74bb7ad4aed0ea743b269 178 Pfam PF06897 Protein of unknown function (DUF1269) 65 168 2.0E-34 T 11-10-2018 IPR009200 Protein of unknown function DUF1269, membrane associated DB34_12785 dd46223f5b19cddb89b5b0ad192c0e6d 231 Pfam PF09976 Tetratricopeptide repeat-like domain 24 210 2.9E-8 T 11-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 DB34_03700 0f3a28dbbe2c678f5ea011c96345c68e 100 Pfam PF04380 Membrane fusogenic activity 3 78 2.4E-23 T 11-10-2018 IPR007475 Membrane fusogenic activity DB34_09825 d8778ac4c74697e40826d2f4641de960 307 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 16 298 1.9E-47 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 DB34_13785 56488ce60534665a2cd71098551c37c2 646 Gene3D G3DSA:1.10.530.10 429 572 1.4E-15 T 11-10-2018 DB34_00130 a1745f1acd2a43c4602072c105e939ca 78 Pfam PF11730 Protein of unknown function (DUF3297) 6 76 2.2E-40 T 11-10-2018 IPR021724 Protein of unknown function DUF3297 DB34_01000 ed5e1da0351ce700d3b6d187ab6f720b 340 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 14 323 5.9E-74 T 11-10-2018 IPR007296 Domain of unknown function DUF403 DB34_10815 8d266f6e7656a2b890f744315a066bde 437 Gene3D G3DSA:1.20.1260.40 317 435 2.0E-11 T 11-10-2018 DB34_00355 9292d28c6f75d83ebcfb1ca9e6a9abb1 161 SUPERFAMILY SSF89447 3 143 2.51E-33 T 11-10-2018 IPR037914 SpoVT-AbrB domain superfamily DB34_00355 9292d28c6f75d83ebcfb1ca9e6a9abb1 161 Pfam PF02381 MraZ protein, putative antitoxin-like 83 138 2.2E-7 T 11-10-2018 IPR020603 MraZ domain DB34_00355 9292d28c6f75d83ebcfb1ca9e6a9abb1 161 Pfam PF02381 MraZ protein, putative antitoxin-like 4 75 1.1E-6 T 11-10-2018 IPR020603 MraZ domain DB34_00355 9292d28c6f75d83ebcfb1ca9e6a9abb1 161 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 161 32.8 T 11-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 DB34_00355 9292d28c6f75d83ebcfb1ca9e6a9abb1 161 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 4 127 1.0E-9 T 11-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 DB34_00355 9292d28c6f75d83ebcfb1ca9e6a9abb1 161 Gene3D G3DSA:2.40.330.20 1 151 1.2E-28 T 11-10-2018 IPR038619 MraZ superfamily DB34_11345 aa32c9acb57025357520ae5679a9f142 119 SUPERFAMILY SSF160719 22 114 6.54E-8 T 11-10-2018 DB34_10330 28aa69a39984fe94a9108bca0ee5ed84 434 Pfam PF03222 Tryptophan/tyrosine permease family 36 337 4.0E-5 T 11-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 DB34_03820 01ffd81aeab5035c3e9dfeaaa76ff403 183 Pfam PF06146 Phosphate-starvation-inducible E 82 151 1.3E-16 T 11-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like DB34_09235 a067a6e1f92022731ef20e467ff9af6b 75 Pfam PF04325 Protein of unknown function (DUF465) 29 73 3.3E-9 T 11-10-2018 IPR007420 Protein of unknown function DUF465 DB34_00730 d687c04c263d51137490d22422d9aa2c 373 Pfam PF01594 AI-2E family transporter 38 361 8.5E-48 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like DB34_11250 53dc44ddecd74c98cb963db6fb81a69b 134 PRINTS PR00447 Natural resistance-associated macrophage protein signature 17 36 1.7E-23 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 DB34_11250 53dc44ddecd74c98cb963db6fb81a69b 134 PRINTS PR00447 Natural resistance-associated macrophage protein signature 45 62 1.7E-23 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 DB34_11250 53dc44ddecd74c98cb963db6fb81a69b 134 PRINTS PR00447 Natural resistance-associated macrophage protein signature 77 96 1.7E-23 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 DB34_11250 53dc44ddecd74c98cb963db6fb81a69b 134 Pfam PF01566 Natural resistance-associated macrophage protein 2 107 3.0E-36 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 DB34_10650 cda5e15451078c64e32d3f2f2b708d7d 480 Pfam PF10009 Uncharacterized protein conserved in bacteria (DUF2252) 57 455 2.5E-130 T 11-10-2018 IPR018721 Protein of unknown function DUF2252 DB34_09240 43621d35f3b0377d88ae5b254685da57 196 Pfam PF06242 Protein of unknown function (DUF1013) 35 171 4.5E-65 T 11-10-2018 IPR010421 Protein of unknown function DUF1013 DB34_08435 b3af7d4b57101d8723b31167161b8128 163 Gene3D G3DSA:1.10.8.640 24 106 3.7E-29 T 11-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily DB34_08435 b3af7d4b57101d8723b31167161b8128 163 Pfam PF03918 Cytochrome C biogenesis protein 18 155 1.9E-48 T 11-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family DB34_12435 ae10ab8269b99400f2aa77dc4ba3ae6a 427 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 139 410 7.8E-77 T 11-10-2018 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 DB34_12435 ae10ab8269b99400f2aa77dc4ba3ae6a 427 Pfam PF01458 Uncharacterized protein family (UPF0051) 173 395 1.1E-67 T 11-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 DB34_12435 ae10ab8269b99400f2aa77dc4ba3ae6a 427 SUPERFAMILY SSF101960 24 420 5.89E-95 T 11-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily DB34_04880 a001f254d7bd30849e44dd800ad2e299 363 TIGRFAM TIGR03476 HpnL: putative membrane protein 11 333 1.0E-89 T 11-10-2018 DB34_04880 a001f254d7bd30849e44dd800ad2e299 363 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 19 323 5.3E-24 T 11-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD DB34_05370 03b3bc4c3e1a44c95ffec1c7e792ad22 274 Pfam PF09849 Uncharacterized protein conserved in bacteria (DUF2076) 1 272 1.7E-65 T 11-10-2018 IPR018648 Protein of unknown function DUF2076 DB34_02560 9fd2f31b49fe6e194caa2546a21b5342 61 Pfam PF01679 Proteolipid membrane potential modulator 1 46 1.3E-5 T 11-10-2018 IPR000612 Proteolipid membrane potential modulator GO:0016021 DB34_08380 ee675c293643139b8c99acf88cccd710 298 Pfam PF02405 Permease MlaE 85 295 7.5E-34 T 11-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 DB34_06800 9d7659344fd282e450d363bbee5a5465 459 Pfam PF06381 Protein of unknown function (DUF1073) 108 454 4.3E-90 T 11-10-2018 IPR024459 Protein of unknown function DUF1073 DB34_08555 22656fd9b195d46d44d2455fa9cae192 423 Pfam PF02646 RmuC family 116 399 1.7E-60 T 11-10-2018 IPR003798 DNA recombination RmuC DB34_07795 b7721d705b9b90584f5e59b3237d9281 219 Pfam PF02631 RecX family 76 203 6.0E-13 T 11-10-2018 IPR003783 Regulatory protein RecX GO:0006282 DB34_11040 642beb97b95e9f22ff7e954e958920f0 360 Pfam PF01594 AI-2E family transporter 23 353 3.0E-37 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like DB34_11515 775aab4681a47088d8c94cc033e5a4ec 214 Pfam PF06810 Phage minor structural protein GP20 32 170 9.1E-12 T 11-10-2018 IPR009636 Capsid assembly scaffolding protein GO:0019069 DB34_12565 b9772ad1fa3a6910eb4f13a3fa96e813 497 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 55 226 7.6E-21 T 11-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like DB34_10185 0e629dfe9342fa699df561b4652b15ec 213 Pfam PF10691 Protein of unknown function (DUF2497) 131 210 9.8E-21 T 11-10-2018 IPR019632 Protein of unknown function DUF2497 DB34_11270 a0a1d6bfd216652fbae9fb683b983322 87 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 5 79 2.8E-21 T 11-10-2018 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system DB34_11270 a0a1d6bfd216652fbae9fb683b983322 87 Gene3D G3DSA:3.10.450.530 1 82 1.4E-21 T 11-10-2018 IPR038573 Ribonuclease toxin BrnT superfamily DB34_07180 f54d69a8b7643a3495c2eacb935e18ea 203 Pfam PF11159 Protein of unknown function (DUF2939) 31 117 2.6E-19 T 11-10-2018 IPR021330 Protein of unknown function DUF2939 DB34_11000 b2aa6a9a97ff0ad35a3bb75f99155ded 498 Pfam PF07642 Putative beta-barrel porin-2, OmpL-like. bbp2 103 475 2.8E-40 T 11-10-2018 IPR011486 Putative beta-barrel porin-2, OmpL-like. bbp2 DB34_01395 c32d2131a753e3eb86310035708fd804 337 SUPERFAMILY SSF47240 69 232 2.2E-18 T 11-10-2018 IPR009078 Ferritin-like superfamily DB34_13140 b80feb2c5362d90c02ee1b24ca4dd475 166 Pfam PF07409 Phage protein GP46 28 155 5.9E-34 T 11-10-2018 IPR010877 Bacteriophage Mu, Gp46 DB34_10355 62128f3ea816cf1933b2ff5505c699d9 176 Pfam PF09933 Predicted small integral membrane protein (DUF2165) 20 175 5.5E-62 T 11-10-2018 IPR018681 Protein of unknown function DUF2165, transmembrane DB34_04460 db205a3fea0d12c0d4509c0c5f7e9cf8 258 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 28 251 2.2E-49 T 11-10-2018 IPR006214 Bax inhibitor 1-related DB34_10785 e40faa7aa8a7d23c823edf58b068ff2d 183 Gene3D G3DSA:3.40.50.11200 1 173 2.0E-48 T 11-10-2018 DB34_07985 87de8ce3accc6332741d205976d76e98 358 Pfam PF09898 Uncharacterized protein conserved in bacteria (DUF2125) 25 336 7.5E-47 T 11-10-2018 IPR018666 Protein of unknown function DUF2125 DB34_06425 80fafbd6b82131e207f652acef212cd9 342 Pfam PF13362 Toprim domain 253 340 5.2E-17 T 11-10-2018 IPR006171 TOPRIM domain DB34_09075 2a544b979c9bccfc54cf08e831b51352 370 Pfam PF13717 zinc-ribbon domain 17 51 5.3E-10 T 11-10-2018 IPR011723 Zinc finger/thioredoxin putative DB34_04145 68da3252a623cc04d8bb868f2914e478 108 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 13 95 2.5E-29 T 11-10-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 DB34_06815 d823b91baf10fcb812d1ae18bddadc92 345 Pfam PF09950 Uncharacterized protein conserved in bacteria (DUF2184) 131 296 1.4E-13 T 11-10-2018 IPR020049 Protein of unknown function DUF2184