APT_00001 PF02639 APT_00001 APT_00002 PF13801 Heavy-metal resistance APT_00003 PF07690 Major Facilitator Superfamily APT_00005 PF03966 Trm112p-like protein APT_00006 PF02190 ATP-dependent protease La (LON) domain APT_00007 PF00085 Thioredoxin APT_00007 PF14559 Tetratricopeptide repeat APT_00007 PF14561 Tetratricopeptide repeat APT_00010 PF02633 Creatinine amidohydrolase APT_00012 PF09848 Uncharacterized conserved protein (DUF2075) APT_00013 PF01106 NifU-like domain APT_00013 PF08712 Scaffold protein Nfu/NifU N terminal APT_00014 PF00881 Nitroreductase family APT_00015 PF00814 Glycoprotease family APT_00016 PF00583 Acetyltransferase (GNAT) family APT_00017 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain APT_00017 PF02843 Phosphoribosylglycinamide synthetase, C domain APT_00017 PF02844 Phosphoribosylglycinamide synthetase, N domain APT_00018 PF02601 APT_00018 APT_00018 PF13742 APT_00018 APT_00020 PF00266 Aminotransferase class-V APT_00021 PF00171 Aldehyde dehydrogenase family APT_00022 PF00107 Zinc-binding dehydrogenase APT_00022 PF08240 Alcohol dehydrogenase GroES-like domain APT_00023 PF02233 NAD(P) transhydrogenase beta subunit APT_00024 PF12769 Domain of unknown function (DUF3814) APT_00025 PF01262 Alanine dehydrogenase/PNT, C-terminal domain APT_00025 PF05222 Alanine dehydrogenase/PNT, N-terminal domain APT_00026 PF01118 Semialdehyde dehydrogenase, NAD binding domain APT_00026 PF02774 Semialdehyde dehydrogenase, dimerisation domain APT_00027 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit APT_00028 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit APT_00029 PF00890 FAD binding domain APT_00029 PF02910 Fumarate reductase flavoprotein C-term APT_00030 PF13085 2Fe-2S iron-sulfur cluster binding domain APT_00030 PF13534 4Fe-4S dicluster domain APT_00031 PF13350 Tyrosine phosphatase family APT_00032 PF00892 EamA-like transporter family APT_00033 PF00162 Phosphoglycerate kinase APT_00034 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain APT_00034 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain APT_00035 PF00456 Transketolase, thiamine diphosphate binding domain APT_00035 PF02779 Transketolase, pyrimidine binding domain APT_00037 PF00155 Aminotransferase class I and II APT_00038 PF13462 Thioredoxin APT_00039 PF01019 Gamma-glutamyltranspeptidase APT_00040 PF00154 recA bacterial DNA recombination protein APT_00041 PF00583 Acetyltransferase (GNAT) family APT_00042 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT_00043 PF04349 Periplasmic glucan biosynthesis protein, MdoG APT_00044 PF13632 Glycosyl transferase family group 2 APT_00045 PF01979 Amidohydrolase family APT_00046 PF07690 Major Facilitator Superfamily APT_00048 PF12169 DNA polymerase III subunits gamma and tau domain III APT_00048 PF12362 APT_00048 APT_00048 PF13177 DNA polymerase III, delta subunit APT_00049 PF02575 YbaB/EbfC DNA-binding family APT_00050 PF02132 RecR protein APT_00050 PF13662 Toprim domain APT_00051 PF13561 Enoyl-(Acyl carrier protein) reductase APT_00052 PF02152 Dihydroneopterin aldolase APT_00053 PF09538 APT_00053 APT_00054 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) APT_00055 PF02224 Cytidylate kinase APT_00056 PF00575 S1 RNA binding domain APT_00058 PF03022 Major royal jelly protein APT_00059 PF01725 Ham1 family APT_00060 PF01138 3' exoribonuclease family, domain 1 APT_00060 PF03725 3' exoribonuclease family, domain 2 APT_00061 PF01628 HrcA protein C terminal domain APT_00062 PF00905 Penicillin binding protein transpeptidase domain APT_00062 PF00912 Transglycosylase APT_00062 PF17092 APT_00062 APT_00063 PF00472 RF-1 domain APT_00063 PF03462 PCRF domain APT_00064 PF03544 Gram-negative bacterial TonB protein C-terminal APT_00065 PF01618 APT_00065 APT_00066 PF02472 Biopolymer transport protein ExbD/TolR APT_00067 PF02472 Biopolymer transport protein ExbD/TolR APT_00069 PF01098 APT_00069 APT_00070 PF00905 Penicillin binding protein transpeptidase domain APT_00070 PF03717 Penicillin-binding Protein dimerisation domain APT_00072 PF04085 rod shape-determining protein MreC APT_00073 PF06723 MreB/Mbl protein APT_00074 PF00682 HMGL-like APT_00074 PF08502 LeuA allosteric (dimerisation) domain APT_00075 PF02628 APT_00075 APT_00076 PF09335 APT_00076 APT_00077 PF07690 Major Facilitator Superfamily APT_00078 PF00072 Response regulator receiver domain APT_00078 PF00512 His Kinase A (phospho-acceptor) domain APT_00078 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APT_00078 PF12860 APT_00078 APT_00079 PF00156 Phosphoribosyl transferase domain APT_00080 PF04632 APT_00080 APT_00081 PF05161 MOFRL family APT_00081 PF13660 Domain of unknown function (DUF4147) APT_00082 PF03167 Uracil DNA glycosylase superfamily APT_00083 PF00034 Cytochrome c APT_00083 PF13442 Cytochrome C oxidase, cbb3-type, subunit III APT_00084 PF13360 PQQ-like domain APT_00084 PF13442 Cytochrome C oxidase, cbb3-type, subunit III APT_00086 PF01027 Inhibitor of apoptosis-promoting Bax1 APT_00087 PF00116 Cytochrome C oxidase subunit II, periplasmic domain APT_00087 PF06481 COX Aromatic Rich Motif APT_00088 PF00115 Cytochrome C and Quinol oxidase polypeptide I APT_00089 PF00510 Cytochrome c oxidase subunit III APT_00090 PF03626 APT_00090 APT_00091 PF00037 4Fe-4S binding domain APT_00091 PF11953 Domain of unknown function (DUF3470) APT_00091 PF12800 4Fe-4S binding domain APT_00092 PF00271 Helicase conserved C-terminal domain APT_00093 PF00883 Cytosol aminopeptidase family, catalytic domain APT_00094 PF01047 MarR family APT_00096 PF00953 Glycosyl transferase family 4 APT_00097 PF02719 Polysaccharide biosynthesis protein APT_00097 PF13727 CoA-binding domain APT_00098 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family APT_00100 PF01979 Amidohydrolase family APT_00101 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain APT_00101 PF07992 Pyridine nucleotide-disulphide oxidoreductase APT_00102 PF00175 Oxidoreductase NAD-binding domain APT_00102 PF00970 Oxidoreductase FAD-binding domain APT_00104 PF00271 Helicase conserved C-terminal domain APT_00104 PF12513 Mitochondrial degradasome RNA helicase subunit C terminal APT_00105 PF00106 short chain dehydrogenase APT_00106 PF09335 APT_00106 APT_00107 PF00326 Prolyl oligopeptidase family APT_00107 PF07676 WD40-like Beta Propeller Repeat APT_00108 PF00390 Malic enzyme, N-terminal domain APT_00108 PF03949 Malic enzyme, NAD binding domain APT_00109 PF02357 Transcription termination factor nusG APT_00110 PF00584 SecE/Sec61-gamma subunits of protein translocation complex APT_00111 PF00213 ATP synthase delta (OSCP) subunit APT_00112 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain APT_00112 PF00306 ATP synthase alpha/beta chain, C terminal domain APT_00112 PF02874 ATP synthase alpha/beta family, beta-barrel domain APT_00113 PF00231 ATP synthase APT_00114 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain APT_00114 PF02874 ATP synthase alpha/beta family, beta-barrel domain APT_00115 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain APT_00116 PF14489 QueF-like protein APT_00117 PF00570 HRDC domain APT_00117 PF01612 3'-5' exonuclease APT_00118 PF00294 pfkB family carbohydrate kinase APT_00119 PF04519 APT_00119 APT_00120 PF07750 APT_00120 APT_00121 PF00324 Amino acid permease APT_00122 PF00005 ABC transporter APT_00123 PF00528 Binding-protein-dependent transport system inner membrane component APT_00124 PF00528 Binding-protein-dependent transport system inner membrane component APT_00126 PF07396 Phosphate-selective porin O and P APT_00127 PF13531 Bacterial extracellular solute-binding protein APT_00128 PF12625 APT_00128 APT_00128 PF12833 Helix-turn-helix domain APT_00129 PF06751 Ethanolamine ammonia lyase large subunit (EutB) APT_00130 PF05985 Ethanolamine ammonia-lyase light chain (EutC) APT_00131 PF13520 Amino acid permease APT_00133 PF00529 HlyD family secretion protein APT_00133 PF16576 APT_00133 APT_00134 PF00873 AcrB/AcrD/AcrF family APT_00135 PF02321 Outer membrane efflux protein APT_00136 PF00313 'Cold-shock' DNA-binding domain APT_00138 PF00593 TonB dependent receptor APT_00138 PF07715 TonB-dependent Receptor Plug Domain APT_00139 PF13403 Hint domain APT_00140 PF01075 Glycosyltransferase family 9 (heptosyltransferase) APT_00143 PF00795 Carbon-nitrogen hydrolase APT_00144 PF00072 Response regulator receiver domain APT_00144 PF00196 Bacterial regulatory proteins, luxR family APT_00145 PF00072 Response regulator receiver domain APT_00145 PF00512 His Kinase A (phospho-acceptor) domain APT_00145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APT_00146 PF13433 Periplasmic binding protein domain APT_00147 PF02653 APT_00147 APT_00148 PF02653 APT_00148 APT_00149 PF00005 ABC transporter APT_00149 PF12399 Branched-chain amino acid ATP-binding cassette transporter APT_00150 PF00005 ABC transporter APT_00155 PF05713 APT_00155 APT_00156 PF00561 alpha/beta hydrolase fold APT_00157 PF00376 MerR family regulatory protein APT_00157 PF09278 MerR, DNA binding APT_00158 PF01965 DJ-1/PfpI family APT_00159 PF01370 NAD dependent epimerase/dehydratase family APT_00162 PF00589 Phage integrase family APT_00163 PF01863 Protein of unknown function DUF45 APT_00164 PF03692 APT_00164 APT_00166 PF13416 Bacterial extracellular solute-binding protein APT_00167 PF00005 ABC transporter APT_00170 PF01047 MarR family APT_00171 PF07869 APT_00171 APT_00172 PF13437 HlyD family secretion protein APT_00172 PF13533 Biotin-lipoyl like APT_00173 PF02321 Outer membrane efflux protein APT_00175 PF01048 Phosphorylase superfamily APT_00176 PF13243 Prenyltransferase-like APT_00176 PF13249 Prenyltransferase-like APT_00177 PF01593 Flavin containing amine oxidoreductase APT_00178 PF00494 Squalene/phytoene synthase APT_00179 PF00494 Squalene/phytoene synthase APT_00180 PF00535 Glycosyl transferase family 2 APT_00181 PF01370 NAD dependent epimerase/dehydratase family APT_00182 PF03706 APT_00182 APT_00183 PF02153 Prephenate dehydrogenase APT_00184 PF13432 Tetratricopeptide repeat APT_00185 PF00444 Ribosomal protein L36 APT_00186 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT_00186 PF03466 LysR substrate binding domain APT_00187 PF00578 AhpC/TSA family APT_00188 PF02627 Carboxymuconolactone decarboxylase family APT_00189 PF04264 YceI-like domain APT_00190 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase APT_00191 PF00719 Inorganic pyrophosphatase APT_00192 PF00005 ABC transporter APT_00192 PF12848 ABC transporter APT_00193 PF13302 Acetyltransferase (GNAT) domain APT_00194 PF05494 Toluene tolerance, Ttg2 APT_00195 PF04333 APT_00195 APT_00196 PF00226 DnaJ domain APT_00196 PF05099 Tellurite resistance protein TerB APT_00198 PF13467 Ribbon-helix-helix domain APT_00199 PF08331 APT_00199 APT_00199 PF13484 APT_00199 APT_00200 PF01702 Queuine tRNA-ribosyltransferase APT_00201 PF02547 Queuosine biosynthesis protein APT_00203 PF01161 Phosphatidylethanolamine-binding protein APT_00205 PF02219 Methylenetetrahydrofolate reductase APT_00206 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain APT_00206 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain APT_00207 PF04339 APT_00207 APT_00208 PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease APT_00210 PF05071 APT_00210 APT_00211 PF02470 APT_00211 APT_00213 PF09923 APT_00213 APT_00214 PF02358 Trehalose-phosphatase APT_00215 PF00982 Glycosyltransferase family 20 APT_00216 PF02600 Disulfide bond formation protein DsbB APT_00217 PF00535 Glycosyl transferase family 2 APT_00217 PF13692 Glycosyl transferases group 1 APT_00218 PF00293 NUDIX domain APT_00219 PF00248 Aldo/keto reductase family APT_00221 PF00271 Helicase conserved C-terminal domain APT_00221 PF02151 UvrB/uvrC motif APT_00221 PF04851 Type III restriction enzyme, res subunit APT_00221 PF12344 Ultra-violet resistance protein B APT_00222 PF13640 2OG-Fe(II) oxygenase superfamily APT_00223 PF00675 Insulinase (Peptidase family M16) APT_00223 PF05193 Peptidase M16 inactive domain APT_00225 PF00702 haloacid dehalogenase-like hydrolase APT_00227 PF00535 Glycosyl transferase family 2 APT_00229 PF00324 Amino acid permease APT_00230 PF00817 impB/mucB/samB family APT_00230 PF11798 IMS family HHH motif APT_00230 PF11799 impB/mucB/samB family C-terminal domain APT_00231 PF05118 Aspartyl/Asparaginyl beta-hydroxylase APT_00233 PF01180 Dihydroorotate dehydrogenase APT_00234 PF13242 HAD-hyrolase-like APT_00234 PF13344 Haloacid dehalogenase-like hydrolase APT_00235 PF00293 NUDIX domain APT_00236 PF13277 YmdB-like protein APT_00237 PF01812 5-formyltetrahydrofolate cyclo-ligase family APT_00238 PF05164 Cell division protein ZapA APT_00241 PF01791 DeoC/LacD family aldolase APT_00242 PF02581 Thiamine monophosphate synthase/TENI APT_00243 PF10696 APT_00243 APT_00244 PF02469 Fasciclin domain APT_00246 PF00152 tRNA synthetases class II (D, K and N) APT_00247 PF04055 Radical SAM superfamily APT_00247 PF12544 Lysine-2,3-aminomutase APT_00247 PF13353 4Fe-4S single cluster domain APT_00248 PF01019 Gamma-glutamyltranspeptidase APT_00249 PF00557 Metallopeptidase family M24 APT_00250 PF00768 D-alanyl-D-alanine carboxypeptidase APT_00251 PF02617 ATP-dependent Clp protease adaptor protein ClpS APT_00252 PF00004 ATPase family associated with various cellular activities (AAA) APT_00252 PF02861 Clp amino terminal domain APT_00252 PF07724 AAA domain (Cdc48 subfamily) APT_00252 PF10431 C-terminal, D2-small domain, of ClpB protein APT_00253 PF11948 APT_00253 APT_00254 PF03976 Polyphosphate kinase 2 (PPK2) APT_00255 PF02622 Uncharacterized ACR, COG1678 APT_00256 PF03668 APT_00256 APT_00258 PF00512 His Kinase A (phospho-acceptor) domain APT_00258 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APT_00258 PF13755 APT_00258 APT_00258 PF13756 APT_00258 APT_00259 PF00072 Response regulator receiver domain APT_00259 PF00486 Transcriptional regulatory protein, C terminal APT_00260 PF01025 GrpE APT_00261 PF00012 Hsp70 protein APT_00262 PF00226 DnaJ domain APT_00262 PF00684 DnaJ central domain APT_00262 PF01556 DnaJ C terminal domain APT_00263 PF01113 Dihydrodipicolinate reductase, N-terminus APT_00263 PF05173 Dihydrodipicolinate reductase, C-terminus APT_00264 PF00438 S-adenosylmethionine synthetase, N-terminal domain APT_00264 PF02772 S-adenosylmethionine synthetase, central domain APT_00264 PF02773 S-adenosylmethionine synthetase, C-terminal domain APT_00265 PF02390 Putative methyltransferase APT_00266 PF01808 AICARFT/IMPCHase bienzyme APT_00266 PF02142 MGS-like domain APT_00268 PF07043 APT_00268 APT_00269 PF00892 EamA-like transporter family APT_00270 PF02092 APT_00270 APT_00270 PF05746 DALR anticodon binding domain APT_00271 PF02091 Glycyl-tRNA synthetase alpha subunit APT_00272 PF09849 APT_00272 APT_00273 PF01381 Helix-turn-helix APT_00274 PF00795 Carbon-nitrogen hydrolase APT_00275 PF13444 Acetyltransferase (GNAT) domain APT_00276 PF01475 Ferric uptake regulator family APT_00277 PF01206 Sulfurtransferase TusA APT_00278 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain APT_00278 PF07497 Rho termination factor, RNA-binding domain APT_00278 PF07498 Rho termination factor, N-terminal domain APT_00280 PF01544 CorA-like Mg2+ transporter protein APT_00281 PF00291 Pyridoxal-phosphate dependent enzyme APT_00282 PF00290 Tryptophan synthase alpha chain APT_00283 PF03486 HI0933-like protein APT_00284 PF01935 Domain of unknown function DUF87 APT_00285 PF13393 Histidyl-tRNA synthetase APT_00286 PF00709 Adenylosuccinate synthetase APT_00287 PF00072 Response regulator receiver domain APT_00287 PF00486 Transcriptional regulatory protein, C terminal APT_00288 PF00512 His Kinase A (phospho-acceptor) domain APT_00288 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APT_00289 PF12849 PBP superfamily domain APT_00290 PF07396 Phosphate-selective porin O and P APT_00294 PF00571 CBS domain APT_00294 PF01595 APT_00294 APT_00294 PF03471 Transporter associated domain APT_00295 PF00107 Zinc-binding dehydrogenase APT_00295 PF08240 Alcohol dehydrogenase GroES-like domain APT_00296 PF00005 ABC transporter APT_00296 PF00664 ABC transporter transmembrane region APT_00296 PF03412 Peptidase C39 family APT_00297 PF13437 HlyD family secretion protein APT_00297 PF13533 Biotin-lipoyl like APT_00299 PF13403 Hint domain APT_00300 PF13561 Enoyl-(Acyl carrier protein) reductase APT_00301 PF01118 Semialdehyde dehydrogenase, NAD binding domain APT_00302 PF03819 MazG nucleotide pyrophosphohydrolase domain APT_00303 PF10696 APT_00303 APT_00304 PF00183 Hsp90 protein APT_00304 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APT_00305 PF05013 N-formylglutamate amidohydrolase APT_00307 PF13884 Chaperone of endosialidase APT_00309 PF08757 APT_00309 APT_00315 PF08795 APT_00315 APT_00316 PF04488 Glycosyltransferase sugar-binding region containing DXD motif APT_00318 PF01757 APT_00318 APT_00320 PF01223 DNA/RNA non-specific endonuclease APT_00322 PF10938 YfdX protein APT_00323 PF01381 Helix-turn-helix APT_00323 PF06114 Domain of unknown function (DUF955) APT_00323 PF09856 APT_00323 APT_00324 PF03972 MmgE/PrpD family APT_00325 PF00285 Citrate synthase APT_00326 PF13714 Phosphoenolpyruvate phosphomutase APT_00327 PF00501 AMP-binding enzyme APT_00327 PF13193 AMP-binding enzyme C-terminal domain APT_00327 PF16177 APT_00327 APT_00328 PF07690 Major Facilitator Superfamily APT_00330 PF07799 APT_00330 APT_00331 PF02073 Thermophilic metalloprotease (M29) APT_00333 PF08904 APT_00333 APT_00334 PF00152 tRNA synthetases class II (D, K and N) APT_00334 PF01336 OB-fold nucleic acid binding domain APT_00334 PF02938 GAD domain APT_00335 PF01212 Beta-eliminating lyase APT_00336 PF01386 Ribosomal L25p family APT_00336 PF14693 Ribosomal protein TL5, C-terminal domain APT_00337 PF01195 Peptidyl-tRNA hydrolase APT_00338 PF01926 50S ribosome-binding GTPase APT_00338 PF06071 Protein of unknown function (DUF933) APT_00339 PF00171 Aldehyde dehydrogenase family APT_00340 PF01467 Cytidylyltransferase APT_00341 PF02410 Oligomerisation domain APT_00342 PF02590 Predicted SPOUT methyltransferase APT_00343 PF00581 Rhodanese-like domain APT_00344 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT_00344 PF03466 LysR substrate binding domain APT_00345 PF03306 Alpha-acetolactate decarboxylase APT_00346 PF00205 Thiamine pyrophosphate enzyme, central domain APT_00346 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain APT_00346 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain APT_00348 PF00205 Thiamine pyrophosphate enzyme, central domain APT_00348 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain APT_00348 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain APT_00349 PF02754 APT_00349 APT_00350 PF02589 Uncharacterised ACR, YkgG family COG1556 APT_00350 PF13183 4Fe-4S dicluster domain APT_00351 PF02589 Uncharacterised ACR, YkgG family COG1556 APT_00352 PF13536 Multidrug resistance efflux transporter APT_00353 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) APT_00354 PF00692 dUTPase APT_00356 PF04966 Carbohydrate-selective porin, OprB family APT_00358 PF04794 YdjC-like protein APT_00359 PF04055 Radical SAM superfamily APT_00360 PF13506 Glycosyl transferase family 21 APT_00361 PF05494 Toluene tolerance, Ttg2 APT_00362 PF02779 Transketolase, pyrimidine binding domain APT_00362 PF02780 Transketolase, C-terminal domain APT_00362 PF13292 1-deoxy-D-xylulose-5-phosphate synthase APT_00363 PF04055 Radical SAM superfamily APT_00363 PF11946 APT_00363 APT_00364 PF00571 CBS domain APT_00364 PF01595 APT_00364 APT_00364 PF03471 Transporter associated domain APT_00365 PF01464 Transglycosylase SLT domain APT_00366 PF03167 Uracil DNA glycosylase superfamily APT_00367 PF09976 Tetratricopeptide repeat APT_00367 PF13414 TPR repeat APT_00368 PF00288 GHMP kinases N terminal domain APT_00368 PF08544 GHMP kinases C terminal APT_00371 PF00106 short chain dehydrogenase APT_00372 PF09335 APT_00372 APT_00374 PF01554 MatE APT_00375 PF00005 ABC transporter APT_00376 PF01061 APT_00376 APT_00377 PF00156 Phosphoribosyl transferase domain APT_00377 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase APT_00378 PF00300 Histidine phosphatase superfamily (branch 1) APT_00383 PF06897 APT_00383 APT_00385 PF00593 TonB dependent receptor APT_00386 PF13561 Enoyl-(Acyl carrier protein) reductase APT_00388 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT_00388 PF03466 LysR substrate binding domain APT_00389 PF00999 Sodium/hydrogen exchanger family APT_00391 PF00593 TonB dependent receptor APT_00391 PF07715 TonB-dependent Receptor Plug Domain APT_00392 PF01497 Periplasmic binding protein APT_00393 PF01032 FecCD transport family APT_00394 PF00005 ABC transporter APT_00395 PF00728 Glycosyl hydrolase family 20, catalytic domain APT_00395 PF02838 Glycosyl hydrolase family 20, domain 2 APT_00396 PF01869 BadF/BadG/BcrA/BcrD ATPase family APT_00398 PF00474 Sodium:solute symporter family APT_00399 PF01075 Glycosyltransferase family 9 (heptosyltransferase) APT_00400 PF13403 Hint domain APT_00401 PF00196 Bacterial regulatory proteins, luxR family APT_00402 PF13403 Hint domain APT_00403 PF00875 DNA photolyase APT_00403 PF03441 FAD binding domain of DNA photolyase APT_00404 PF01641 SelR domain APT_00405 PF13430 APT_00405 APT_00406 PF01594 APT_00406 APT_00407 PF00155 Aminotransferase class I and II APT_00408 PF13403 Hint domain APT_00409 PF00210 Ferritin-like domain APT_00410 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus APT_00410 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus APT_00411 PF04324 BFD-like [2Fe-2S] binding domain APT_00413 PF05232 APT_00413 APT_00414 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT_00414 PF03466 LysR substrate binding domain APT_00415 PF06433 Methylamine dehydrogenase heavy chain (MADH) APT_00416 PF07291 APT_00416 APT_00418 PF02975 Methylamine dehydrogenase, L chain APT_00420 PF07642 APT_00420 APT_00423 PF00248 Aldo/keto reductase family APT_00424 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT_00424 PF03466 LysR substrate binding domain APT_00425 PF00171 Aldehyde dehydrogenase family APT_00426 PF00034 Cytochrome c APT_00426 PF13442 Cytochrome C oxidase, cbb3-type, subunit III APT_00427 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase APT_00428 PF00111 2Fe-2S iron-sulfur cluster binding domain APT_00428 PF01799 [2Fe-2S] binding domain APT_00429 PF04577 APT_00429 APT_00430 PF08241 Methyltransferase domain APT_00433 PF13403 Hint domain APT_00434 PF07690 Major Facilitator Superfamily APT_00436 PF01844 HNH endonuclease APT_00439 PF02325 APT_00439 APT_00444 PF06912 APT_00444 APT_00446 PF05656 APT_00446 APT_00448 PF07452 APT_00448 APT_00450 PF03724 META domain APT_00451 PF13403 Hint domain APT_00452 PF10544 APT_00452 APT_00454 PF06776 Invasion associated locus B (IalB) protein APT_00455 PF00593 TonB dependent receptor APT_00455 PF07715 TonB-dependent Receptor Plug Domain APT_00456 PF13442 Cytochrome C oxidase, cbb3-type, subunit III APT_00457 PF01266 FAD dependent oxidoreductase APT_00459 PF05368 NmrA-like family APT_00460 PF07007 Protein of unknown function (DUF1311) APT_00462 PF13403 Hint domain APT_00463 PF13403 Hint domain APT_00464 PF01810 APT_00464 APT_00466 PF13403 Hint domain APT_00467 PF01381 Helix-turn-helix APT_00472 PF13403 Hint domain APT_00473 PF00239 Resolvase, N terminal domain APT_00474 PF13403 Hint domain APT_00475 PF02310 B12 binding domain APT_00475 PF04055 Radical SAM superfamily APT_00476 PF01757 APT_00476 APT_00480 PF03237 Terminase-like family APT_00480 PF17289 APT_00480 APT_00481 PF00581 Rhodanese-like domain APT_00482 PF06381 APT_00482 APT_00483 PF09979 APT_00483 APT_00485 PF09950 APT_00485 APT_00487 PF13262 APT_00487 APT_00490 PF11863 APT_00490 APT_00500 PF04865 APT_00500 APT_00501 PF11041 APT_00501 APT_00505 PF00999 Sodium/hydrogen exchanger family APT_00506 PF00593 TonB dependent receptor APT_00506 PF07715 TonB-dependent Receptor Plug Domain APT_00507 PF01636 Phosphotransferase enzyme family APT_00508 PF04973 APT_00508 APT_00509 PF11776 Domain of unknown function (DUF3315) APT_00511 PF00551 Formyl transferase APT_00511 PF01842 ACT domain APT_00512 PF04343 APT_00512 APT_00513 PF02082 Transcriptional regulator APT_00514 PF00106 short chain dehydrogenase APT_00515 PF02537 APT_00515 APT_00516 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily APT_00519 PF03061 Thioesterase superfamily APT_00520 PF13403 Hint domain APT_00521 PF03544 Gram-negative bacterial TonB protein C-terminal APT_00522 PF01431 Peptidase family M13 APT_00522 PF05649 Peptidase family M13 APT_00523 PF00593 TonB dependent receptor APT_00524 PF00440 Bacterial regulatory proteins, tetR family APT_00525 PF01144 Coenzyme A transferase APT_00526 PF05161 MOFRL family APT_00526 PF13660 Domain of unknown function (DUF4147) APT_00527 PF00441 Acyl-CoA dehydrogenase, C-terminal domain APT_00527 PF02770 Acyl-CoA dehydrogenase, middle domain APT_00527 PF02771 Acyl-CoA dehydrogenase, N-terminal domain APT_00528 PF13561 Enoyl-(Acyl carrier protein) reductase APT_00529 PF06187 Protein of unknown function (DUF993) APT_00530 PF01261 Xylose isomerase-like TIM barrel APT_00531 PF01012 Electron transfer flavoprotein domain APT_00532 PF00766 Electron transfer flavoprotein FAD-binding domain APT_00532 PF01012 Electron transfer flavoprotein domain APT_00533 PF00171 Aldehyde dehydrogenase family APT_00534 PF00732 GMC oxidoreductase APT_00534 PF05199 GMC oxidoreductase APT_00535 PF07690 Major Facilitator Superfamily APT_00536 PF04966 Carbohydrate-selective porin, OprB family APT_00538 PF13403 Hint domain APT_00539 PF03976 Polyphosphate kinase 2 (PPK2) APT_00540 PF01384 APT_00540 APT_00542 PF00676 Dehydrogenase E1 component APT_00543 PF02779 Transketolase, pyrimidine binding domain APT_00543 PF02780 Transketolase, C-terminal domain APT_00544 PF00364 Biotin-requiring enzyme APT_00544 PF00561 alpha/beta hydrolase fold APT_00545 PF00011 Hsp20/alpha crystallin family APT_00547 PF07992 Pyridine nucleotide-disulphide oxidoreductase APT_00548 PF00400 WD domain, G-beta repeat APT_00549 PF02492 CobW/HypB/UreG, nucleotide-binding domain APT_00549 PF07683 Cobalamin synthesis protein cobW C-terminal domain APT_00550 PF00654 Voltage gated chloride channel APT_00551 PF01545 Cation efflux family APT_00551 PF16916 APT_00551 APT_00552 PF01545 Cation efflux family APT_00553 PF07992 Pyridine nucleotide-disulphide oxidoreductase APT_00554 PF12697 Alpha/beta hydrolase family APT_00555 PF00582 Universal stress protein family APT_00557 PF03169 APT_00557 APT_00558 PF13372 Alginate export APT_00560 PF11324 APT_00560 APT_00561 PF11159 APT_00561 APT_00563 PF00899 ThiF family APT_00564 PF06347 Bacterial SH3 domain APT_00565 PF00224 Pyruvate kinase, barrel domain APT_00565 PF02887 Pyruvate kinase, alpha/beta domain APT_00566 PF08450 SMP-30/Gluconolaconase/LRE-like region APT_00568 PF07690 Major Facilitator Superfamily APT_00570 PF00009 Elongation factor Tu GTP binding domain APT_00570 PF00679 Elongation factor G C-terminus APT_00570 PF03144 Elongation factor Tu domain 2 APT_00573 PF01266 FAD dependent oxidoreductase APT_00574 PF07992 Pyridine nucleotide-disulphide oxidoreductase APT_00575 PF00180 Isocitrate/isopropylmalate dehydrogenase APT_00577 PF00155 Aminotransferase class I and II APT_00578 PF00543 Nitrogen regulatory protein P-II APT_00579 PF00120 Glutamine synthetase, catalytic domain APT_00579 PF03951 Glutamine synthetase, beta-Grasp domain APT_00580 PF03544 Gram-negative bacterial TonB protein C-terminal APT_00581 PF01011 PQQ enzyme repeat APT_00584 PF00009 Elongation factor Tu GTP binding domain APT_00584 PF00679 Elongation factor G C-terminus APT_00584 PF03144 Elongation factor Tu domain 2 APT_00584 PF06421 GTP-binding protein LepA C-terminus APT_00585 PF00561 alpha/beta hydrolase fold APT_00586 PF07021 Methionine biosynthesis protein MetW APT_00587 PF00270 DEAD/DEAH box helicase APT_00587 PF00271 Helicase conserved C-terminal domain APT_00589 PF00484 Carbonic anhydrase APT_00590 PF01936 NYN domain APT_00591 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) APT_00592 PF01192 RNA polymerase Rpb6 APT_00593 PF02824 TGS domain APT_00593 PF04607 Region found in RelA / SpoT proteins APT_00593 PF13291 ACT domain APT_00593 PF13328 HD domain APT_00594 PF01648 4'-phosphopantetheinyl transferase superfamily APT_00595 PF00717 Peptidase S24-like APT_00596 PF00035 Double-stranded RNA binding motif APT_00596 PF14622 Ribonuclease-III-like APT_00597 PF01926 50S ribosome-binding GTPase APT_00597 PF07650 KH domain APT_00598 PF00696 Amino acid kinase family APT_00599 PF01765 Ribosome recycling factor APT_00600 PF01255 Putative undecaprenyl diphosphate synthase APT_00601 PF01148 Cytidylyltransferase family APT_00602 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase APT_00602 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal APT_00602 PF13288 DXP reductoisomerase C-terminal domain APT_00603 PF02163 Peptidase family M50 APT_00603 PF13180 PDZ domain APT_00604 PF01103 Surface antigen APT_00604 PF07244 Surface antigen variable number repeat APT_00605 PF03938 Outer membrane protein (OmpH-like) APT_00606 PF00132 Bacterial transferase hexapeptide (six repeats) APT_00606 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD APT_00607 PF07977 FabA-like domain APT_00608 PF00132 Bacterial transferase hexapeptide (six repeats) APT_00608 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 APT_00609 PF06230 Protein of unknown function (DUF1009) APT_00610 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily APT_00612 PF00468 Ribosomal protein L34 APT_00613 PF00825 Ribonuclease P APT_00614 PF02096 60Kd inner membrane protein APT_00614 PF14849 YidC periplasmic domain APT_00615 PF01926 50S ribosome-binding GTPase APT_00616 PF00696 Amino acid kinase family APT_00617 PF00132 Bacterial transferase hexapeptide (six repeats) APT_00617 PF14602 Hexapeptide repeat of succinyl-transferase APT_00617 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal APT_00618 PF01546 Peptidase family M20/M25/M40 APT_00618 PF07687 Peptidase dimerisation domain APT_00620 PF01416 tRNA pseudouridine synthase APT_00621 PF00551 Formyl transferase APT_00621 PF02911 Formyl transferase, C-terminal domain APT_00622 PF01327 Polypeptide deformylase APT_00623 PF00011 Hsp20/alpha crystallin family APT_00625 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein APT_00625 PF16321 APT_00625 APT_00627 PF03473 MOSC domain APT_00627 PF03476 MOSC N-terminal beta barrel domain APT_00628 PF00005 ABC transporter APT_00628 PF12399 Branched-chain amino acid ATP-binding cassette transporter APT_00629 PF03968 OstA-like protein APT_00630 PF06835 Lipopolysaccharide-assembly, LptC-related APT_00631 PF00571 CBS domain APT_00631 PF01380 SIS domain APT_00632 PF01612 3'-5' exonuclease APT_00633 PF00588 SpoU rRNA Methylase family APT_00633 PF08032 RNA 2'-O ribose methyltransferase substrate binding APT_00634 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin APT_00635 PF00106 short chain dehydrogenase APT_00636 PF00625 Guanylate kinase APT_00637 PF00294 pfkB family carbohydrate kinase APT_00637 PF01467 Cytidylyltransferase APT_00638 PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) APT_00639 PF00772 DnaB-like helicase N terminal domain APT_00639 PF03796 DnaB-like helicase C terminal domain APT_00640 PF08378 APT_00640 APT_00641 PF00924 Mechanosensitive ion channel APT_00641 PF12607 APT_00641 APT_00643 PF00005 ABC transporter APT_00644 PF02405 APT_00644 APT_00646 PF13481 AAA domain APT_00646 PF13541 Subunit ChlI of Mg-chelatase APT_00650 PF00324 Amino acid permease APT_00651 PF06912 APT_00651 APT_00652 PF00171 Aldehyde dehydrogenase family APT_00652 PF01619 Proline dehydrogenase APT_00652 PF14850 DNA-binding domain of Proline dehydrogenase APT_00653 PF00392 Bacterial regulatory proteins, gntR family APT_00653 PF07729 FCD domain APT_00655 PF00501 AMP-binding enzyme APT_00655 PF13193 AMP-binding enzyme C-terminal domain APT_00655 PF16177 APT_00655 APT_00656 PF07866 Protein of unknown function (DUF1653) APT_00659 PF01728 FtsJ-like methyltransferase APT_00660 PF04241 APT_00660 APT_00661 PF01923 Cobalamin adenosyltransferase APT_00664 PF01565 FAD binding domain APT_00664 PF02913 FAD linked oxidases, C-terminal domain APT_00666 PF01300 Telomere recombination APT_00666 PF03481 Putative GTP-binding controlling metal-binding APT_00667 PF00459 Inositol monophosphatase family APT_00668 PF00883 Cytosol aminopeptidase family, catalytic domain APT_00668 PF02789 Cytosol aminopeptidase family, N-terminal domain APT_00669 PF04364 DNA polymerase III chi subunit, HolC APT_00670 PF00248 Aldo/keto reductase family APT_00671 PF13180 PDZ domain APT_00671 PF13365 Trypsin-like peptidase domain APT_00672 PF00271 Helicase conserved C-terminal domain APT_00672 PF04408 Helicase associated domain (HA2) APT_00672 PF08482 APT_00672 APT_00674 PF01430 Hsp33 protein APT_00677 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain APT_00677 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain APT_00678 PF00202 Aminotransferase class-III APT_00679 PF02631 RecX family APT_00680 PF05257 CHAP domain APT_00681 PF02416 mttA/Hcf106 family APT_00682 PF00596 Class II Aldolase and Adducin N-terminal domain APT_00683 PF03079 ARD/ARD' family APT_00684 PF00702 haloacid dehalogenase-like hydrolase APT_00685 PF01687 Riboflavin kinase APT_00685 PF06574 FAD synthetase APT_00686 PF00133 tRNA synthetases class I (I, L, M and V) APT_00686 PF06827 Zinc finger found in FPG and IleRS APT_00686 PF08264 Anticodon-binding domain of tRNA APT_00687 PF01252 APT_00687 APT_00688 PF11233 APT_00688 APT_00689 PF01119 DNA mismatch repair protein, C-terminal domain APT_00689 PF08676 MutL C terminal dimerisation domain APT_00689 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APT_00690 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains APT_00691 PF00892 EamA-like transporter family APT_00693 PF00204 DNA gyrase B APT_00693 PF00986 DNA gyrase B subunit, carboxyl terminus APT_00693 PF01751 Toprim domain APT_00693 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APT_00696 PF02082 Transcriptional regulator APT_00697 PF00291 Pyridoxal-phosphate dependent enzyme APT_00698 PF00691 OmpA family APT_00699 PF07372 Protein of unknown function (DUF1491) APT_00700 PF03572 Peptidase family S41 APT_00701 PF00773 RNB domain APT_00702 PF01131 DNA topoisomerase APT_00702 PF01396 APT_00702 APT_00702 PF01751 Toprim domain APT_00702 PF13368 APT_00702 APT_00703 PF02481 DNA recombination-mediator protein A APT_00704 PF02660 APT_00704 APT_00705 PF01979 Amidohydrolase family APT_00706 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain APT_00706 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain APT_00707 PF00749 tRNA synthetases class I (E and Q), catalytic domain APT_00708 PF03772 APT_00708 APT_00709 PF02627 Carboxymuconolactone decarboxylase family APT_00710 PF03969 AFG1-like ATPase APT_00711 PF00676 Dehydrogenase E1 component APT_00711 PF02779 Transketolase, pyrimidine binding domain APT_00711 PF16078 APT_00711 APT_00711 PF16870 APT_00711 APT_00712 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) APT_00712 PF00364 Biotin-requiring enzyme APT_00712 PF02817 e3 binding domain APT_00713 PF00364 Biotin-requiring enzyme APT_00713 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain APT_00713 PF07992 Pyridine nucleotide-disulphide oxidoreductase APT_00715 PF12200 Domain of unknown function (DUF3597) APT_00716 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain APT_00716 PF05221 S-adenosyl-L-homocysteine hydrolase APT_00718 PF01553 Acyltransferase APT_00720 PF09898 APT_00720 APT_00721 PF00753 Metallo-beta-lactamase superfamily APT_00721 PF16123 APT_00721 APT_00722 PF08241 Methyltransferase domain APT_00727 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit APT_00728 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit APT_00729 PF01066 CDP-alcohol phosphatidyltransferase APT_00729 PF08009 APT_00729 APT_00730 PF02666 APT_00730 APT_00731 PF01411 tRNA synthetases class II (A) APT_00731 PF02272 DHHA1 domain APT_00731 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain APT_00732 PF04138 APT_00732 APT_00733 PF00691 OmpA family APT_00734 PF01202 Shikimate kinase APT_00734 PF01761 3-dehydroquinate synthase APT_00736 PF00589 Phage integrase family APT_00736 PF02899 Phage integrase, N-terminal SAM-like domain APT_00737 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit APT_00738 PF00994 Probable molybdopterin binding domain APT_00739 PF01921 tRNA synthetases class I (K) APT_00740 PF03706 APT_00740 APT_00740 PF09924 Uncharacterized conserved protein (DUF2156) APT_00741 PF01914 APT_00741 APT_00742 PF04378 Ribosomal RNA small subunit methyltransferase D, RsmJ APT_00743 PF00814 Glycoprotease family APT_00744 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain APT_00744 PF03900 Porphobilinogen deaminase, C-terminal domain APT_00745 PF02602 Uroporphyrinogen-III synthase HemD APT_00746 PF02556 Preprotein translocase subunit SecB APT_00747 PF00300 Histidine phosphatase superfamily (branch 1) APT_00748 PF04280 Tim44-like domain APT_00749 PF01555 DNA methylase APT_00750 PF00034 Cytochrome c APT_00750 PF03150 Di-haem cytochrome c peroxidase APT_00750 PF14376 APT_00750 APT_00751 PF01713 Smr domain APT_00753 PF01218 Coproporphyrinogen III oxidase APT_00754 PF00032 Cytochrome b(C-terminal)/b6/petD APT_00754 PF00033 Cytochrome b(N-terminal)/b6/petB APT_00755 PF02167 Cytochrome C1 family APT_00756 PF01048 Phosphorylase superfamily APT_00757 PF14016 APT_00757 APT_00758 PF01810 APT_00758 APT_00760 PF00881 Nitroreductase family APT_00761 PF02423 Ornithine cyclodeaminase/mu-crystallin family APT_00762 PF00171 Aldehyde dehydrogenase family APT_00763 PF00440 Bacterial regulatory proteins, tetR family APT_00763 PF13305 WHG domain APT_00766 PF00959 Phage lysozyme APT_00773 PF00589 Phage integrase family APT_00773 PF13356 Domain of unknown function (DUF4102) APT_00774 PF07927 YcfA-like protein APT_00775 PF05534 APT_00775 APT_00781 PF13274 APT_00781 APT_00782 PF00589 Phage integrase family APT_00786 PF08861 APT_00786 APT_00786 PF08862 APT_00786 APT_00788 PF13560 Helix-turn-helix domain APT_00796 PF13921 Myb-like DNA-binding domain APT_00800 PF06048 APT_00800 APT_00803 PF02548 Ketopantoate hydroxymethyltransferase APT_00804 PF00724 NADH:flavin oxidoreductase / NADH oxidase family APT_00805 PF12840 Helix-turn-helix domain APT_00806 PF08240 Alcohol dehydrogenase GroES-like domain APT_00807 PF00089 Trypsin APT_00808 PF01370 NAD dependent epimerase/dehydratase family APT_00809 PF13779 APT_00809 APT_00810 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain APT_00810 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain APT_00811 PF00206 Lyase APT_00811 PF14698 Argininosuccinate lyase C-terminal APT_00813 PF05013 N-formylglutamate amidohydrolase APT_00814 PF01488 Shikimate / quinate 5-dehydrogenase APT_00814 PF08501 Shikimate dehydrogenase substrate binding domain APT_00815 PF01121 Dephospho-CoA kinase APT_00816 PF00929 Exonuclease APT_00818 PF00534 Glycosyl transferases group 1 APT_00818 PF13579 Glycosyl transferase 4-like domain APT_00819 PF07940 Heparinase II/III-like protein APT_00820 PF00834 Ribulose-phosphate 3 epimerase family APT_00821 PF01029 NusB family APT_00821 PF01189 NOL1/NOP2/sun family APT_00822 PF00551 Formyl transferase APT_00823 PF00586 AIR synthase related protein, N-terminal domain APT_00823 PF02769 AIR synthase related protein, C-terminal domain APT_00825 PF02503 Polyphosphate kinase middle domain APT_00825 PF13089 Polyphosphate kinase N-terminal domain APT_00825 PF13090 Polyphosphate kinase C-terminal domain APT_00826 PF02541 Ppx/GppA phosphatase family APT_00827 PF00211 Adenylate and Guanylate cyclase catalytic domain APT_00827 PF02743 Cache domain APT_00828 PF02405 APT_00828 APT_00830 PF02470 APT_00830 APT_00832 PF00754 F5/8 type C domain APT_00833 PF01007 Inward rectifier potassium channel APT_00834 PF04632 APT_00834 APT_00835 PF04632 APT_00835 APT_00836 PF06078 Bacterial protein of unknown function (DUF937) APT_00839 PF03918 Cytochrome C biogenesis protein APT_00840 PF00578 AhpC/TSA family APT_00841 PF01578 APT_00841 APT_00841 PF16327 APT_00841 APT_00842 PF03100 CcmE APT_00844 PF01578 APT_00844 APT_00845 PF03795 YCII-related domain APT_00846 PF01878 EVE domain APT_00847 PF04273 Putative phosphatase (DUF442) APT_00849 PF12787 APT_00849 APT_00851 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain APT_00851 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain APT_00852 PF03588 Leucyl/phenylalanyl-tRNA protein transferase APT_00856 PF13502 APT_00856 APT_00857 PF03710 Glutamate-ammonia ligase adenylyltransferase APT_00857 PF08335 GlnD PII-uridylyltransferase APT_00858 PF00578 AhpC/TSA family APT_00860 PF07690 Major Facilitator Superfamily APT_00862 PF02646 APT_00862 APT_00863 PF00072 Response regulator receiver domain APT_00863 PF00486 Transcriptional regulatory protein, C terminal APT_00864 PF00512 His Kinase A (phospho-acceptor) domain APT_00864 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APT_00865 PF00873 AcrB/AcrD/AcrF family APT_00866 PF16576 APT_00866 APT_00867 PF02321 Outer membrane efflux protein APT_00868 PF00298 Ribosomal protein L11, RNA binding domain APT_00868 PF03946 Ribosomal protein L11, N-terminal domain APT_00869 PF00687 Ribosomal protein L1p/L10e family APT_00870 PF00466 Ribosomal protein L10 APT_00871 PF00542 Ribosomal protein L7/L12 C-terminal domain APT_00871 PF16320 APT_00871 APT_00872 PF00562 RNA polymerase Rpb2, domain 6 APT_00872 PF04560 RNA polymerase Rpb2, domain 7 APT_00872 PF04561 RNA polymerase Rpb2, domain 2 APT_00872 PF04563 RNA polymerase beta subunit APT_00872 PF04565 RNA polymerase Rpb2, domain 3 APT_00872 PF10385 RNA polymerase beta subunit external 1 domain APT_00873 PF00623 RNA polymerase Rpb1, domain 2 APT_00873 PF04983 RNA polymerase Rpb1, domain 3 APT_00873 PF04997 RNA polymerase Rpb1, domain 1 APT_00873 PF04998 RNA polymerase Rpb1, domain 5 APT_00873 PF05000 RNA polymerase Rpb1, domain 4 APT_00874 PF00164 Ribosomal protein S12/S23 APT_00875 PF00177 Ribosomal protein S7p/S5e APT_00876 PF00009 Elongation factor Tu GTP binding domain APT_00876 PF03143 Elongation factor Tu C-terminal domain APT_00876 PF03144 Elongation factor Tu domain 2 APT_00877 PF00338 Ribosomal protein S10p/S20e APT_00878 PF00297 Ribosomal protein L3 APT_00879 PF00573 Ribosomal protein L4/L1 family APT_00880 PF00276 Ribosomal protein L23 APT_00881 PF00181 Ribosomal Proteins L2, RNA binding domain APT_00881 PF03947 Ribosomal Proteins L2, C-terminal domain APT_00882 PF00203 Ribosomal protein S19 APT_00883 PF00237 Ribosomal protein L22p/L17e APT_00884 PF00189 Ribosomal protein S3, C-terminal domain APT_00884 PF07650 KH domain APT_00885 PF00252 Ribosomal protein L16p/L10e APT_00886 PF00831 Ribosomal L29 protein APT_00887 PF00366 Ribosomal protein S17 APT_00888 PF00238 Ribosomal protein L14p/L23e APT_00889 PF00467 KOW motif APT_00889 PF17136 APT_00889 APT_00890 PF00281 Ribosomal protein L5 APT_00890 PF00673 ribosomal L5P family C-terminus APT_00891 PF00253 Ribosomal protein S14p/S29e APT_00892 PF00410 Ribosomal protein S8 APT_00893 PF00347 Ribosomal protein L6 APT_00894 PF00861 Ribosomal L18p/L5e family APT_00895 PF00333 Ribosomal protein S5, N-terminal domain APT_00895 PF03719 Ribosomal protein S5, C-terminal domain APT_00896 PF00327 Ribosomal protein L30p/L7e APT_00897 PF00828 Ribosomal protein L18e/L15 APT_00898 PF00344 SecY translocase APT_00899 PF00406 Adenylate kinase APT_00899 PF05191 Adenylate kinase, active site lid APT_00900 PF00416 Ribosomal protein S13/S18 APT_00901 PF00411 Ribosomal protein S11 APT_00902 PF01000 RNA polymerase Rpb3/RpoA insert domain APT_00902 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain APT_00902 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain APT_00903 PF01196 Ribosomal protein L17 APT_00904 PF13379 NMT1-like family APT_00905 PF00528 Binding-protein-dependent transport system inner membrane component APT_00906 PF00005 ABC transporter APT_00908 PF07043 APT_00908 APT_00909 PF02321 Outer membrane efflux protein APT_00910 PF00873 AcrB/AcrD/AcrF family APT_00911 PF00873 AcrB/AcrD/AcrF family APT_00912 PF16576 APT_00912 APT_00913 PF07690 Major Facilitator Superfamily APT_00914 PF05532 CsbD-like APT_00915 PF01351 Ribonuclease HII APT_00916 PF01555 DNA methylase APT_00919 PF07584 APT_00919 APT_00919 PF13709 Domain of unknown function (DUF4159) APT_00920 PF01882 APT_00920 APT_00921 PF07726 ATPase family associated with various cellular activities (AAA) APT_00922 PF06938 Protein of unknown function (DUF1285) APT_00923 PF01743 Poly A polymerase head domain APT_00923 PF12627 Probable RNA and SrmB- binding site of polymerase A APT_00924 PF00005 ABC transporter APT_00924 PF00664 ABC transporter transmembrane region APT_00925 PF00529 HlyD family secretion protein APT_00925 PF16576 APT_00925 APT_00926 PF07690 Major Facilitator Superfamily APT_00927 PF00293 NUDIX domain APT_00928 PF04748 Divergent polysaccharide deacetylase APT_00929 PF03572 Peptidase family S41 APT_00929 PF13180 PDZ domain APT_00930 PF01551 Peptidase family M23 APT_00931 PF01676 Metalloenzyme superfamily APT_00931 PF06415 BPG-independent PGAM N-terminus (iPGM_N) APT_00932 PF00291 Pyridoxal-phosphate dependent enzyme APT_00933 PF01272 Transcription elongation factor, GreA/GreB, C-term APT_00933 PF03449 Transcription elongation factor, N-terminal APT_00934 PF02142 MGS-like domain APT_00934 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain APT_00934 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain APT_00935 PF00117 Glutamine amidotransferase class-I APT_00935 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain APT_00936 PF09424 Yqey-like protein APT_00937 PF01807 CHC2 zinc finger APT_00937 PF08275 DNA primase catalytic core, N-terminal domain APT_00937 PF13662 Toprim domain APT_00938 PF00140 Sigma-70 factor, region 1 APT_00938 PF03979 Sigma-70 factor, region 1 APT_00938 PF04539 Sigma-70 region 3 APT_00938 PF04542 Sigma-70 region 2 APT_00938 PF04545 Sigma-70, region 4 APT_00938 PF04546 Sigma-70, non-essential region APT_00939 PF13673 Acetyltransferase (GNAT) domain APT_00940 PF01250 Ribosomal protein S6 APT_00941 PF01084 Ribosomal protein S18 APT_00942 PF01281 Ribosomal protein L9, N-terminal domain APT_00942 PF03948 Ribosomal protein L9, C-terminal domain APT_00943 PF02353 Mycolic acid cyclopropane synthetase APT_00944 PF00398 Ribosomal RNA adenine dimethylase APT_00945 PF00639 PPIC-type PPIASE domain APT_00945 PF09312 SurA N-terminal domain APT_00946 PF03968 OstA-like protein APT_00946 PF04453 Organic solvent tolerance protein APT_00947 PF03739 APT_00947 APT_00948 PF03739 APT_00948 APT_00950 PF00005 ABC transporter APT_00950 PF00664 ABC transporter transmembrane region APT_00951 PF00392 Bacterial regulatory proteins, gntR family APT_00951 PF07729 FCD domain APT_00952 PF03776 Septum formation topological specificity factor MinE APT_00953 PF13614 AAA domain APT_00954 PF03775 Septum formation inhibitor MinC, C-terminal domain APT_00954 PF05209 Septum formation inhibitor MinC, N-terminal domain APT_00955 PF00043 Glutathione S-transferase, C-terminal domain APT_00955 PF13417 Glutathione S-transferase, N-terminal domain APT_00956 PF03486 HI0933-like protein APT_00957 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases APT_00958 PF13458 Periplasmic binding protein APT_00959 PF13424 Tetratricopeptide repeat APT_00959 PF13432 Tetratricopeptide repeat APT_00960 PF02559 CarD-like/TRCF domain APT_00961 PF01062 APT_00961 APT_00962 PF00756 Putative esterase APT_00963 PF02698 DUF218 domain APT_00965 PF00005 ABC transporter APT_00966 PF13717 APT_00966 APT_00968 PF00072 Response regulator receiver domain APT_00968 PF00512 His Kinase A (phospho-acceptor) domain APT_00968 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APT_00969 PF00072 Response regulator receiver domain APT_00969 PF00512 His Kinase A (phospho-acceptor) domain APT_00969 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APT_00969 PF08448 PAS fold APT_00970 PF00227 Proteasome subunit APT_00971 PF00004 ATPase family associated with various cellular activities (AAA) APT_00971 PF07724 AAA domain (Cdc48 subfamily) APT_00971 PF10431 C-terminal, D2-small domain, of ClpB protein APT_00972 PF02657 Fe-S metabolism associated domain APT_00973 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase APT_00974 PF00111 2Fe-2S iron-sulfur cluster binding domain APT_00974 PF01799 [2Fe-2S] binding domain APT_00975 PF00034 Cytochrome c APT_00975 PF13442 Cytochrome C oxidase, cbb3-type, subunit III APT_00976 PF01232 Mannitol dehydrogenase Rossmann domain APT_00976 PF08125 Mannitol dehydrogenase C-terminal domain APT_00977 PF01632 Ribosomal protein L35 APT_00978 PF00453 Ribosomal protein L20 APT_00979 PF01409 tRNA synthetases class II core domain (F) APT_00979 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain APT_00980 PF01588 Putative tRNA binding domain APT_00980 PF03147 Ferredoxin-fold anticodon binding domain APT_00980 PF03483 B3/4 domain APT_00980 PF03484 tRNA synthetase B5 domain APT_00981 PF12849 PBP superfamily domain APT_00982 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APT_00984 PF00027 Cyclic nucleotide-binding domain APT_00984 PF00999 Sodium/hydrogen exchanger family APT_00985 PF03729 APT_00985 APT_00986 PF00163 Ribosomal protein S4/S9 N-terminal domain APT_00986 PF01479 S4 domain APT_00987 PF00009 Elongation factor Tu GTP binding domain APT_00987 PF03144 Elongation factor Tu domain 2 APT_00987 PF16658 APT_00987 APT_00989 PF00180 Isocitrate/isopropylmalate dehydrogenase APT_00990 PF00557 Metallopeptidase family M24 APT_00990 PF01321 Creatinase/Prolidase N-terminal domain APT_00990 PF16188 APT_00990 APT_00990 PF16189 APT_00990 APT_00991 PF06325 Ribosomal protein L11 methyltransferase (PrmA) APT_00992 PF00580 UvrD/REP helicase N-terminal domain APT_00992 PF13361 UvrD-like helicase C-terminal domain APT_00993 PF04002 RadC-like JAB domain APT_00994 PF04002 RadC-like JAB domain APT_00995 PF02222 ATP-grasp domain APT_00996 PF00731 AIR carboxylase APT_00997 PF04325 Protein of unknown function (DUF465) APT_00998 PF04325 Protein of unknown function (DUF465) APT_00999 PF06242 APT_00999 APT_01000 PF00011 Hsp20/alpha crystallin family APT_01002 PF01197 Ribosomal protein L31 APT_01004 PF01741 Large-conductance mechanosensitive channel, MscL APT_01006 PF02355 Protein export membrane protein APT_01006 PF07549 SecD/SecF GG Motif APT_01007 PF02355 Protein export membrane protein APT_01007 PF07549 SecD/SecF GG Motif APT_01008 PF01408 Oxidoreductase family, NAD-binding Rossmann fold APT_01009 PF00317 Ribonucleotide reductase, all-alpha domain APT_01009 PF02867 Ribonucleotide reductase, barrel domain APT_01010 PF00268 Ribonucleotide reductase, small chain APT_01011 PF05175 Methyltransferase small domain APT_01012 PF00348 Polyprenyl synthetase APT_01013 PF01177 Asp/Glu/Hydantoin racemase APT_01014 PF00156 Phosphoribosyl transferase domain APT_01016 PF00285 Citrate synthase APT_01017 PF00300 Histidine phosphatase superfamily (branch 1) APT_01018 PF01817 Chorismate mutase type II APT_01019 PF00149 Calcineurin-like phosphoesterase APT_01020 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain APT_01020 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain APT_01022 PF02463 RecF/RecN/SMC N terminal domain APT_01023 PF13462 Thioredoxin APT_01024 PF00571 CBS domain APT_01024 PF03471 Transporter associated domain APT_01025 PF02130 Uncharacterized protein family UPF0054 APT_01026 PF02562 PhoH-like protein APT_01027 PF00919 Uncharacterized protein family UPF0004 APT_01027 PF01938 TRAM domain APT_01027 PF04055 Radical SAM superfamily APT_01028 PF01553 Acyltransferase APT_01029 PF01103 Surface antigen APT_01029 PF07244 Surface antigen variable number repeat APT_01030 PF04357 APT_01030 APT_01031 PF03372 Endonuclease/Exonuclease/phosphatase family APT_01032 PF01244 Membrane dipeptidase (Peptidase family M19) APT_01033 PF01541 GIY-YIG catalytic domain APT_01033 PF02151 UvrB/uvrC motif APT_01033 PF08459 UvrC Helix-hairpin-helix N-terminal APT_01033 PF14520 Helix-hairpin-helix domain APT_01034 PF01066 CDP-alcohol phosphatidyltransferase APT_01036 PF02597 ThiS family APT_01037 PF02391 MoaE protein APT_01038 PF00202 Aminotransferase class-III APT_01039 PF00155 Aminotransferase class I and II APT_01040 PF12697 Alpha/beta hydrolase family APT_01041 PF13489 Methyltransferase domain APT_01041 PF13500 AAA domain APT_01042 PF00717 Peptidase S24-like APT_01042 PF01726 LexA DNA binding domain APT_01043 PF00994 Probable molybdopterin binding domain APT_01043 PF03453 MoeA N-terminal region (domain I and II) APT_01043 PF03454 MoeA C-terminal region (domain IV) APT_01044 PF00471 Ribosomal protein L33 APT_01045 PF04977 Septum formation initiator APT_01046 PF00113 Enolase, C-terminal TIM barrel domain APT_01046 PF03952 Enolase, N-terminal domain APT_01047 PF11911 APT_01047 APT_01048 PF01266 FAD dependent oxidoreductase APT_01049 PF02597 ThiS family APT_01050 PF05690 Thiazole biosynthesis protein ThiG APT_01051 PF02581 Thiamine monophosphate synthase/TENI APT_01052 PF00270 DEAD/DEAH box helicase APT_01052 PF00271 Helicase conserved C-terminal domain APT_01052 PF17191 APT_01052 APT_01053 PF03937 Flavinator of succinate dehydrogenase APT_01054 PF00270 DEAD/DEAH box helicase APT_01054 PF00271 Helicase conserved C-terminal domain APT_01054 PF02559 CarD-like/TRCF domain APT_01054 PF03461 TRCF domain APT_01056 PF13593 SBF-like CPA transporter family (DUF4137) APT_01057 PF00282 Pyridoxal-dependent decarboxylase conserved domain APT_01058 PF06213 APT_01058 APT_01058 PF11775 APT_01058 APT_01059 PF07728 AAA domain (dynein-related subfamily) APT_01059 PF12556 APT_01059 APT_01060 PF00226 DnaJ domain APT_01061 PF01722 BolA-like protein APT_01062 PF03548 Outer membrane lipoprotein carrier protein LolA APT_01063 PF03099 Biotin/lipoate A/B protein ligase family APT_01064 PF00483 Nucleotidyl transferase APT_01065 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain APT_01065 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I APT_01065 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II APT_01065 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III APT_01066 PF04055 Radical SAM superfamily APT_01066 PF06463 Molybdenum Cofactor Synthesis C APT_01066 PF13353 4Fe-4S single cluster domain APT_01067 PF08241 Methyltransferase domain APT_01068 PF00156 Phosphoribosyl transferase domain APT_01069 PF00462 Glutaredoxin APT_01070 PF06676 APT_01070 APT_01071 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) APT_01072 PF10282 Lactonase, 7-bladed beta-propeller APT_01073 PF13489 Methyltransferase domain APT_01074 PF00696 Amino acid kinase family APT_01074 PF01842 ACT domain APT_01074 PF13840 ACT domain APT_01075 PF03060 Nitronate monooxygenase APT_01076 PF13413 Helix-turn-helix domain APT_01076 PF13464 APT_01076 APT_01077 PF04551 GcpE protein APT_01078 PF03129 Anticodon binding domain APT_01078 PF13393 Histidyl-tRNA synthetase APT_01079 PF00472 RF-1 domain APT_01079 PF03462 PCRF domain APT_01081 PF13847 Methyltransferase domain APT_01082 PF13763 APT_01082 APT_01083 PF02470 APT_01083 APT_01084 PF02673 APT_01084 APT_01085 PF13520 Amino acid permease APT_01086 PF02222 ATP-grasp domain APT_01087 PF09335 APT_01087 APT_01088 PF13406 Transglycosylase SLT domain APT_01089 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel APT_01089 PF05036 Sporulation related domain APT_01090 PF00768 D-alanyl-D-alanine carboxypeptidase APT_01090 PF07943 Penicillin-binding protein 5, C-terminal domain APT_01091 PF02223 Thymidylate kinase APT_01092 PF13177 DNA polymerase III, delta subunit APT_01093 PF09334 tRNA synthetases class I (M) APT_01094 PF01026 TatD related DNase APT_01095 PF12706 Beta-lactamase superfamily domain APT_01096 PF00582 Universal stress protein family APT_01097 PF01243 Pyridoxamine 5'-phosphate oxidase APT_01097 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region APT_01098 PF13561 Enoyl-(Acyl carrier protein) reductase APT_01099 PF01264 Chorismate synthase APT_01100 PF02566 OsmC-like protein APT_01101 PF06039 APT_01101 APT_01102 PF01242 6-pyruvoyl tetrahydropterin synthase APT_01103 PF06508 Queuosine biosynthesis protein QueC APT_01105 PF04055 Radical SAM superfamily APT_01105 PF06968 Biotin and Thiamin Synthesis associated domain APT_01106 PF03891 APT_01106 APT_01107 PF01507 Phosphoadenosine phosphosulfate reductase family APT_01108 PF01507 Phosphoadenosine phosphosulfate reductase family APT_01109 PF00009 Elongation factor Tu GTP binding domain APT_01109 PF01583 Adenylylsulphate kinase APT_01110 PF11011 APT_01110 APT_01111 PF01077 Nitrite and sulphite reductase 4Fe-4S domain APT_01111 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain APT_01112 PF06073 APT_01112 APT_01113 PF04028 APT_01113 APT_01113 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) APT_01114 PF02606 Tetraacyldisaccharide-1-P 4'-kinase APT_01115 PF03279 APT_01115 APT_01116 PF00459 Inositol monophosphatase family APT_01117 PF04366 APT_01117 APT_01118 PF02618 YceG-like family APT_01119 PF00109 Beta-ketoacyl synthase, N-terminal domain APT_01119 PF02801 Beta-ketoacyl synthase, C-terminal domain APT_01120 PF00550 Phosphopantetheine attachment site APT_01122 PF13561 Enoyl-(Acyl carrier protein) reductase APT_01123 PF00698 Acyl transferase domain APT_01124 PF02698 DUF218 domain APT_01125 PF13847 Methyltransferase domain APT_01126 PF04069 Substrate binding domain of ABC-type glycine betaine transport system APT_01128 PF09982 Uncharacterized protein conserved in bacteria (DUF2219) APT_01129 PF00313 'Cold-shock' DNA-binding domain APT_01130 PF01668 SmpB protein APT_01131 PF00701 Dihydrodipicolinate synthetase family APT_01132 PF00800 Prephenate dehydratase APT_01132 PF01842 ACT domain APT_01133 PF02348 Cytidylyltransferase APT_01134 PF00034 Cytochrome c APT_01135 PF00459 Inositol monophosphatase family APT_01136 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain APT_01136 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain APT_01137 PF01078 Magnesium chelatase, subunit ChlI APT_01137 PF13335 APT_01137 APT_01137 PF13541 Subunit ChlI of Mg-chelatase APT_01138 PF01053 Cys/Met metabolism PLP-dependent enzyme APT_01139 PF00581 Rhodanese-like domain APT_01140 PF01594 APT_01140 APT_01141 PF03372 Endonuclease/Exonuclease/phosphatase family APT_01142 PF13091 PLD-like domain APT_01142 PF13396 APT_01142 APT_01143 PF02021 Uncharacterised protein family UPF0102 APT_01145 PF00462 Glutaredoxin APT_01146 PF01722 BolA-like protein APT_01147 PF00586 AIR synthase related protein, N-terminal domain APT_01147 PF02769 AIR synthase related protein, C-terminal domain APT_01148 PF13507 CobB/CobQ-like glutamine amidotransferase domain APT_01150 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase APT_01151 PF01259 SAICAR synthetase APT_01152 PF00206 Lyase APT_01152 PF10397 Adenylosuccinate lyase C-terminus APT_01153 PF03741 APT_01153 APT_01154 PF01464 Transglycosylase SLT domain APT_01155 PF04608 Phosphatidylglycerophosphatase A APT_01156 PF02464 Competence-damaged protein APT_01159 PF03364 Polyketide cyclase / dehydrase and lipid transport APT_01160 PF04055 Radical SAM superfamily APT_01161 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain APT_01161 PF07992 Pyridine nucleotide-disulphide oxidoreductase APT_01162 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) APT_01162 PF00364 Biotin-requiring enzyme APT_01162 PF02817 e3 binding domain APT_01163 PF00364 Biotin-requiring enzyme APT_01163 PF02779 Transketolase, pyrimidine binding domain APT_01163 PF02780 Transketolase, C-terminal domain APT_01164 PF00676 Dehydrogenase E1 component APT_01165 PF01967 MoaC family APT_01166 PF00218 Indole-3-glycerol phosphate synthase APT_01167 PF00591 Glycosyl transferase family, a/b domain APT_01167 PF02885 Glycosyl transferase family, helical bundle domain APT_01168 PF00117 Glutamine amidotransferase class-I APT_01169 PF00425 chorismate binding enzyme APT_01169 PF04715 Anthranilate synthase component I, N terminal region APT_01170 PF13145 PPIC-type PPIASE domain APT_01170 PF13624 SurA N-terminal domain APT_01171 PF00121 Triosephosphate isomerase APT_01172 PF03840 Preprotein translocase SecG subunit APT_01173 PF00117 Glutamine amidotransferase class-I APT_01173 PF06418 CTP synthase N-terminus APT_01174 PF00793 DAHP synthetase I family APT_01175 PF00204 DNA gyrase B APT_01175 PF00986 DNA gyrase B subunit, carboxyl terminus APT_01175 PF01751 Toprim domain APT_01175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APT_01176 PF13304 AAA domain APT_01177 PF00712 DNA polymerase III beta subunit, N-terminal domain APT_01177 PF02767 DNA polymerase III beta subunit, central domain APT_01177 PF02768 DNA polymerase III beta subunit, C-terminal domain APT_01178 PF00308 Bacterial dnaA protein APT_01178 PF08299 Bacterial dnaA protein helix-turn-helix APT_01178 PF11638 DnaA N-terminal domain APT_01180 PF01649 Ribosomal protein S20 APT_01181 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain APT_01181 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain APT_01182 PF01209 ubiE/COQ5 methyltransferase family APT_01183 PF02441 Flavoprotein APT_01183 PF04127 DNA / pantothenate metabolism flavoprotein APT_01184 PF00692 dUTPase APT_01185 PF00528 Binding-protein-dependent transport system inner membrane component APT_01186 PF00005 ABC transporter APT_01186 PF09821 APT_01186 APT_01187 PF01625 Peptide methionine sulfoxide reductase APT_01188 PF00133 tRNA synthetases class I (I, L, M and V) APT_01188 PF08264 Anticodon-binding domain of tRNA APT_01188 PF10458 Valyl tRNA synthetase tRNA binding arm APT_01189 PF10691 APT_01189 APT_01190 PF02321 Outer membrane efflux protein APT_01191 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) APT_01192 PF00589 Phage integrase family APT_01192 PF13356 Domain of unknown function (DUF4102) APT_01194 PF02498 APT_01194 APT_01194 PF03374 APT_01194 APT_01201 PF00959 Phage lysozyme APT_01205 PF01844 HNH endonuclease APT_01206 PF11363 APT_01206 APT_01207 PF00589 Phage integrase family APT_01207 PF02899 Phage integrase, N-terminal SAM-like domain APT_01215 PF01381 Helix-turn-helix APT_01219 PF05930 Prophage CP4-57 regulatory protein (AlpA) APT_01220 PF04607 Region found in RelA / SpoT proteins APT_01221 PF04245 APT_01221 APT_01222 PF13403 Hint domain APT_01225 PF00106 short chain dehydrogenase APT_01227 PF00586 AIR synthase related protein, N-terminal domain APT_01227 PF02769 AIR synthase related protein, C-terminal domain APT_01228 PF01029 NusB family APT_01229 PF03477 ATP cone domain APT_01231 PF04314 Protein of unknown function (DUF461) APT_01232 PF00370 FGGY family of carbohydrate kinases, N-terminal domain APT_01232 PF02782 FGGY family of carbohydrate kinases, C-terminal domain APT_01233 PF00230 Major intrinsic protein APT_01234 PF01266 FAD dependent oxidoreductase APT_01234 PF16901 APT_01234 APT_01235 PF00455 APT_01235 APT_01235 PF08220 DeoR-like helix-turn-helix domain APT_01236 PF00270 DEAD/DEAH box helicase APT_01236 PF00271 Helicase conserved C-terminal domain APT_01236 PF00570 HRDC domain APT_01236 PF09382 RQC domain APT_01236 PF16124 APT_01236 APT_01237 PF00691 OmpA family APT_01238 PF00005 ABC transporter APT_01238 PF00664 ABC transporter transmembrane region APT_01239 PF00005 ABC transporter APT_01239 PF00664 ABC transporter transmembrane region APT_01240 PF07568 APT_01240 APT_01240 PF13581 Histidine kinase-like ATPase domain APT_01242 PF04542 Sigma-70 region 2 APT_01242 PF08281 Sigma-70, region 4 APT_01243 PF04542 Sigma-70 region 2 APT_01243 PF08281 Sigma-70, region 4 APT_01244 PF00072 Response regulator receiver domain APT_01245 PF00005 ABC transporter APT_01245 PF16326 APT_01245 APT_01246 PF01204 Trehalase APT_01247 PF00107 Zinc-binding dehydrogenase APT_01247 PF08240 Alcohol dehydrogenase GroES-like domain APT_01248 PF03831 PhnA protein APT_01248 PF08274 PhnA Zinc-Ribbon APT_01249 PF03222 Tryptophan/tyrosine permease family APT_01250 PF02558 Ketopantoate reductase PanE/ApbA APT_01250 PF08546 Ketopantoate reductase PanE/ApbA C terminal APT_01251 PF02567 Phenazine biosynthesis-like protein APT_01252 PF01979 Amidohydrolase family APT_01253 PF09084 NMT1/THI5 like APT_01254 PF09933 APT_01254 APT_01255 PF00005 ABC transporter APT_01256 PF00528 Binding-protein-dependent transport system inner membrane component APT_01257 PF03171 2OG-Fe(II) oxygenase superfamily APT_01257 PF14226 non-haem dioxygenase in morphine synthesis N-terminal APT_01258 PF01979 Amidohydrolase family APT_01259 PF07715 TonB-dependent Receptor Plug Domain APT_01260 PF01546 Peptidase family M20/M25/M40 APT_01260 PF07687 Peptidase dimerisation domain APT_01261 PF00266 Aminotransferase class-V APT_01262 PF11533 Protein of unknown function (DUF3225) APT_01263 PF13318 APT_01263 APT_01264 PF01425 Amidase APT_01265 PF02625 XdhC and CoxI family APT_01265 PF13478 XdhC Rossmann domain APT_01266 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain APT_01266 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase APT_01267 PF00111 2Fe-2S iron-sulfur cluster binding domain APT_01267 PF00941 FAD binding domain in molybdopterin dehydrogenase APT_01267 PF01799 [2Fe-2S] binding domain APT_01267 PF03450 CO dehydrogenase flavoprotein C-terminal domain APT_01268 PF00860 Permease family APT_01269 PF00576 HIUase/Transthyretin family APT_01270 PF09349 OHCU decarboxylase APT_01271 PF01522 Polysaccharide deacetylase APT_01272 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) APT_01273 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT_01273 PF03466 LysR substrate binding domain APT_01274 PF01979 Amidohydrolase family APT_01275 PF01019 Gamma-glutamyltranspeptidase APT_01276 PF02472 Biopolymer transport protein ExbD/TolR APT_01277 PF02472 Biopolymer transport protein ExbD/TolR APT_01278 PF01618 APT_01278 APT_01279 PF03544 Gram-negative bacterial TonB protein C-terminal APT_01280 PF10262 Rdx family APT_01281 PF13437 HlyD family secretion protein APT_01281 PF13533 Biotin-lipoyl like APT_01282 PF00005 ABC transporter APT_01282 PF12698 ABC-2 family transporter protein APT_01283 PF12698 ABC-2 family transporter protein APT_01284 PF02321 Outer membrane efflux protein APT_01285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT_01285 PF03466 LysR substrate binding domain APT_01286 PF03601 APT_01286 APT_01288 PF13243 Prenyltransferase-like APT_01288 PF13249 Prenyltransferase-like APT_01289 PF00440 Bacterial regulatory proteins, tetR family APT_01290 PF00440 Bacterial regulatory proteins, tetR family APT_01290 PF13305 WHG domain APT_01291 PF03583 Secretory lipase APT_01292 PF06965 Na+/H+ antiporter 1 APT_01293 PF00171 Aldehyde dehydrogenase family APT_01294 PF00724 NADH:flavin oxidoreductase / NADH oxidase family APT_01295 PF01638 HxlR-like helix-turn-helix APT_01296 PF00199 Catalase APT_01296 PF06628 Catalase-related immune-responsive APT_01297 PF00472 RF-1 domain APT_01299 PF06165 Glycosyltransferase family 36 APT_01299 PF10091 Putative glucoamylase APT_01299 PF17167 APT_01299 APT_01300 PF01979 Amidohydrolase family APT_01301 PF00583 Acetyltransferase (GNAT) family APT_01302 PF08543 Phosphomethylpyrimidine kinase APT_01304 PF11162 APT_01304 APT_01305 PF00593 TonB dependent receptor APT_01305 PF07715 TonB-dependent Receptor Plug Domain APT_01306 PF00005 ABC transporter APT_01306 PF06472 APT_01306 APT_01307 PF01904 Protein of unknown function DUF72 APT_01308 PF02586 Uncharacterised ACR, COG2135 APT_01309 PF00012 Hsp70 protein APT_01310 PF02321 Outer membrane efflux protein APT_01311 PF00873 AcrB/AcrD/AcrF family APT_01312 PF16576 APT_01312 APT_01313 PF00893 Small Multidrug Resistance protein APT_01314 PF00440 Bacterial regulatory proteins, tetR family APT_01315 PF10009 APT_01315 APT_01316 PF05170 APT_01316 APT_01317 PF07690 Major Facilitator Superfamily APT_01318 PF04909 Amidohydrolase APT_01319 PF13403 Hint domain APT_01319 PF16168 APT_01319 APT_01320 PF12680 SnoaL-like domain APT_01321 PF02311 AraC-like ligand binding domain APT_01321 PF12833 Helix-turn-helix domain APT_01322 PF04073 Aminoacyl-tRNA editing domain APT_01323 PF07690 Major Facilitator Superfamily APT_01325 PF03544 Gram-negative bacterial TonB protein C-terminal APT_01326 PF02472 Biopolymer transport protein ExbD/TolR APT_01327 PF01618 APT_01327 APT_01329 PF03929 APT_01329 APT_01330 PF00593 TonB dependent receptor APT_01330 PF07660 Secretin and TonB N terminus short domain APT_01330 PF07715 TonB-dependent Receptor Plug Domain APT_01331 PF04773 FecR protein APT_01331 PF16220 APT_01331 APT_01332 PF04542 Sigma-70 region 2 APT_01332 PF08281 Sigma-70, region 4 APT_01333 PF07715 TonB-dependent Receptor Plug Domain APT_01334 PF04773 FecR protein APT_01334 PF16220 APT_01334 APT_01335 PF04542 Sigma-70 region 2 APT_01335 PF08281 Sigma-70, region 4 APT_01336 PF13379 NMT1-like family APT_01337 PF00005 ABC transporter APT_01338 PF00528 Binding-protein-dependent transport system inner membrane component APT_01339 PF03583 Secretory lipase APT_01340 PF02668 Taurine catabolism dioxygenase TauD, TfdA family APT_01341 PF00593 TonB dependent receptor APT_01341 PF07715 TonB-dependent Receptor Plug Domain APT_01342 PF07690 Major Facilitator Superfamily APT_01343 PF13372 Alginate export APT_01344 PF07690 Major Facilitator Superfamily APT_01345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT_01345 PF03466 LysR substrate binding domain APT_01346 PF00920 Dehydratase family APT_01347 PF03328 HpcH/HpaI aldolase/citrate lyase family APT_01348 PF01979 Amidohydrolase family APT_01349 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT_01349 PF03466 LysR substrate binding domain APT_01350 PF00465 Iron-containing alcohol dehydrogenase APT_01351 PF07690 Major Facilitator Superfamily APT_01352 PF00171 Aldehyde dehydrogenase family APT_01353 PF09084 NMT1/THI5 like APT_01354 PF00528 Binding-protein-dependent transport system inner membrane component APT_01355 PF00005 ABC transporter APT_01356 PF08753 NikR C terminal nickel binding domain APT_01357 PF09347 Domain of unknown function (DUF1989) APT_01358 PF09347 Domain of unknown function (DUF1989) APT_01359 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain APT_01359 PF00364 Biotin-requiring enzyme APT_01359 PF02626 Allophanate hydrolase subunit 2 APT_01359 PF02682 Allophanate hydrolase subunit 1 APT_01359 PF02785 Biotin carboxylase C-terminal domain APT_01359 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain APT_01360 PF01425 Amidase APT_01361 PF07859 alpha/beta hydrolase fold APT_01362 PF11784 APT_01362 APT_01362 PF13086 AAA domain APT_01362 PF13087 AAA domain APT_01362 PF13195 APT_01362 APT_01362 PF13245 Part of AAA domain APT_01363 PF02770 Acyl-CoA dehydrogenase, middle domain APT_01363 PF08028 Acyl-CoA dehydrogenase, C-terminal domain APT_01364 PF00593 TonB dependent receptor APT_01364 PF07715 TonB-dependent Receptor Plug Domain APT_01365 PF01126 Heme oxygenase APT_01366 PF03992 Antibiotic biosynthesis monooxygenase APT_01367 PF00005 ABC transporter APT_01368 PF01032 FecCD transport family APT_01369 PF01497 Periplasmic binding protein APT_01370 PF03992 Antibiotic biosynthesis monooxygenase APT_01371 PF01325 Iron dependent repressor, N-terminal DNA binding domain APT_01371 PF02742 Iron dependent repressor, metal binding and dimerisation domain APT_01372 PF01566 APT_01372 APT_01375 PF13628 APT_01375 APT_01376 PF03022 Major royal jelly protein APT_01377 PF00561 alpha/beta hydrolase fold APT_01378 PF00909 Ammonium Transporter Family APT_01380 PF01179 Copper amine oxidase, enzyme domain APT_01380 PF02728 Copper amine oxidase, N3 domain APT_01381 PF12625 APT_01381 APT_01383 PF02492 CobW/HypB/UreG, nucleotide-binding domain APT_01383 PF07683 Cobalamin synthesis protein cobW C-terminal domain APT_01384 PF00724 NADH:flavin oxidoreductase / NADH oxidase family APT_01385 PF00106 short chain dehydrogenase APT_01386 PF12833 Helix-turn-helix domain APT_01387 PF00149 Calcineurin-like phosphoesterase APT_01388 PF00440 Bacterial regulatory proteins, tetR family APT_01388 PF16859 APT_01388 APT_01389 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain APT_01389 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase APT_01390 PF00111 2Fe-2S iron-sulfur cluster binding domain APT_01390 PF00941 FAD binding domain in molybdopterin dehydrogenase APT_01390 PF01799 [2Fe-2S] binding domain APT_01390 PF03450 CO dehydrogenase flavoprotein C-terminal domain APT_01391 PF13403 Hint domain APT_01392 PF13403 Hint domain APT_01393 PF00005 ABC transporter APT_01393 PF00664 ABC transporter transmembrane region APT_01393 PF03412 Peptidase C39 family APT_01394 PF13437 HlyD family secretion protein APT_01397 PF13340 APT_01397 APT_01397 PF13586 APT_01397 APT_01398 PF13347 MFS/sugar transport protein APT_01399 PF00296 Luciferase-like monooxygenase APT_01400 PF00296 Luciferase-like monooxygenase APT_01401 PF00593 TonB dependent receptor APT_01401 PF07715 TonB-dependent Receptor Plug Domain APT_01403 PF01613 Flavin reductase like domain APT_01404 PF00083 Sugar (and other) transporter APT_01405 PF13454 FAD-NAD(P)-binding APT_01406 PF00296 Luciferase-like monooxygenase APT_01407 PF00296 Luciferase-like monooxygenase APT_01408 PF02770 Acyl-CoA dehydrogenase, middle domain APT_01408 PF02771 Acyl-CoA dehydrogenase, N-terminal domain APT_01408 PF08028 Acyl-CoA dehydrogenase, C-terminal domain APT_01410 PF00881 Nitroreductase family APT_01412 PF00593 TonB dependent receptor APT_01412 PF07715 TonB-dependent Receptor Plug Domain APT_01414 PF02384 N-6 DNA Methylase APT_01414 PF12161 HsdM N-terminal domain APT_01415 PF01420 Type I restriction modification DNA specificity domain APT_01416 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) APT_01416 PF04851 Type III restriction enzyme, res subunit APT_01417 PF01863 Protein of unknown function DUF45 APT_01418 PF13776 APT_01418 APT_01419 PF01075 Glycosyltransferase family 9 (heptosyltransferase) APT_01420 PF00501 AMP-binding enzyme APT_01421 PF00107 Zinc-binding dehydrogenase APT_01421 PF00109 Beta-ketoacyl synthase, N-terminal domain APT_01421 PF00550 Phosphopantetheine attachment site APT_01421 PF00698 Acyl transferase domain APT_01421 PF02801 Beta-ketoacyl synthase, C-terminal domain APT_01421 PF08659 KR domain APT_01421 PF14765 Polyketide synthase dehydratase APT_01421 PF16197 APT_01421 APT_01422 PF00501 AMP-binding enzyme APT_01423 PF13403 Hint domain APT_01425 PF13340 APT_01425 APT_01426 PF13586 APT_01426 APT_01429 PF00069 Protein kinase domain APT_01429 PF08378 APT_01429 APT_01431 PF02384 N-6 DNA Methylase APT_01431 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) APT_01432 PF02384 N-6 DNA Methylase APT_01432 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) APT_01433 PF13560 Helix-turn-helix domain APT_01434 PF13586 APT_01434 APT_01435 PF13340 APT_01435 APT_01436 PF02661 Fic/DOC family APT_01437 PF11843 APT_01437 APT_01438 PF01464 Transglycosylase SLT domain APT_01439 PF05284 APT_01439 APT_01440 PF10502 Signal peptidase, peptidase S26 APT_01441 PF13586 APT_01441 APT_01442 PF13340 APT_01442 APT_01443 PF00239 Resolvase, N terminal domain APT_01443 PF07508 Recombinase APT_01443 PF13408 Recombinase zinc beta ribbon domain APT_01445 PF00005 ABC transporter APT_01446 PF00375 Sodium:dicarboxylate symporter family APT_01447 PF05724 Thiopurine S-methyltransferase (TPMT) APT_01448 PF04399 Glutaredoxin 2, C terminal domain APT_01448 PF13417 Glutathione S-transferase, N-terminal domain APT_01449 PF07690 Major Facilitator Superfamily APT_01451 PF01888 CbiD APT_01452 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases APT_01453 PF01890 Cobalamin synthesis G C-terminus APT_01454 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases APT_01454 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) APT_01455 PF02571 APT_01455 APT_01456 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases APT_01457 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases APT_01458 PF02570 Precorrin-8X methylmutase APT_01459 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain APT_01460 PF07876 Stress responsive A/B Barrel Domain APT_01461 PF00206 Lyase APT_01461 PF10415 Fumarase C C-terminus APT_01463 PF02954 Bacterial regulatory protein, Fis family APT_01464 PF13557 APT_01464 APT_01465 PF01011 PQQ enzyme repeat APT_01467 PF07642 APT_01467 APT_01468 PF00999 Sodium/hydrogen exchanger family APT_01469 PF03929 APT_01469 APT_01473 PF01594 APT_01473 APT_01474 PF13502 APT_01474 APT_01475 PF00871 Acetokinase family APT_01476 PF01515 Phosphate acetyl/butaryl transferase APT_01477 PF01180 Dihydroorotate dehydrogenase APT_01478 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase APT_01478 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg APT_01478 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain APT_01478 PF10371 Domain of unknown function APT_01478 PF13484 APT_01478 APT_01478 PF17147 APT_01478 APT_01479 PF07992 Pyridine nucleotide-disulphide oxidoreductase APT_01479 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster APT_01481 PF00440 Bacterial regulatory proteins, tetR family APT_01482 PF02659 APT_01482 APT_01483 PF02798 Glutathione S-transferase, N-terminal domain APT_01483 PF14497 Glutathione S-transferase, C-terminal domain APT_01484 PF02634 FdhD/NarQ family APT_01485 PF12804 MobA-like NTP transferase domain APT_01486 PF03205 Molybdopterin guanine dinucleotide synthesis protein B APT_01487 PF00994 Probable molybdopterin binding domain APT_01487 PF03453 MoeA N-terminal region (domain I and II) APT_01488 PF04216 Protein involved in formate dehydrogenase formation APT_01489 PF01292 Prokaryotic cytochrome b561 APT_01490 PF09163 Formate dehydrogenase N, transmembrane APT_01490 PF13247 4Fe-4S dicluster domain APT_01491 PF00384 Molybdopterin oxidoreductase APT_01491 PF01568 Molydopterin dinucleotide binding domain APT_01491 PF04879 Molybdopterin oxidoreductase Fe4S4 domain APT_01492 PF02541 Ppx/GppA phosphatase family APT_01493 PF01728 FtsJ-like methyltransferase APT_01494 PF00480 ROK family APT_01495 PF01206 Sulfurtransferase TusA APT_01496 PF02609 Exonuclease VII small subunit APT_01497 PF00348 Polyprenyl synthetase APT_01498 PF02779 Transketolase, pyrimidine binding domain APT_01498 PF02780 Transketolase, C-terminal domain APT_01498 PF13292 1-deoxy-D-xylulose-5-phosphate synthase APT_01499 PF01479 S4 domain APT_01499 PF01728 FtsJ-like methyltransferase APT_01501 PF04055 Radical SAM superfamily APT_01502 PF00764 Arginosuccinate synthase APT_01503 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase APT_01504 PF13442 Cytochrome C oxidase, cbb3-type, subunit III APT_01505 PF00579 tRNA synthetases class I (W and Y) APT_01506 PF06912 APT_01506 APT_01507 PF00072 Response regulator receiver domain APT_01507 PF00486 Transcriptional regulatory protein, C terminal APT_01508 PF03734 L,D-transpeptidase catalytic domain APT_01509 PF00999 Sodium/hydrogen exchanger family APT_01509 PF02254 TrkA-N domain APT_01510 PF01189 NOL1/NOP2/sun family APT_01511 PF00478 IMP dehydrogenase / GMP reductase domain APT_01511 PF00571 CBS domain APT_01512 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APT_01513 PF00528 Binding-protein-dependent transport system inner membrane component APT_01513 PF12911 APT_01513 APT_01514 PF00528 Binding-protein-dependent transport system inner membrane component APT_01515 PF00005 ABC transporter APT_01515 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APT_01516 PF00005 ABC transporter APT_01516 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APT_01517 PF03060 Nitronate monooxygenase APT_01518 PF01569 PAP2 superfamily APT_01519 PF00445 Ribonuclease T2 family APT_01520 PF06516 APT_01520 APT_01521 PF04185 Phosphoesterase family APT_01521 PF05506 APT_01521 APT_01522 PF00593 TonB dependent receptor APT_01522 PF07715 TonB-dependent Receptor Plug Domain APT_01524 PF12006 APT_01524 APT_01525 PF07519 Tannase and feruloyl esterase APT_01526 PF07690 Major Facilitator Superfamily APT_01528 PF04954 Siderophore-interacting protein APT_01528 PF08021 Siderophore-interacting FAD-binding domain APT_01529 PF01596 O-methyltransferase APT_01530 PF03551 Transcriptional regulator PadR-like family APT_01531 PF00593 TonB dependent receptor APT_01531 PF07715 TonB-dependent Receptor Plug Domain APT_01532 PF17090 APT_01532 APT_01533 PF13437 HlyD family secretion protein APT_01533 PF13533 Biotin-lipoyl like APT_01534 PF04632 APT_01534 APT_01535 PF02321 Outer membrane efflux protein APT_01536 PF02310 B12 binding domain APT_01536 PF04055 Radical SAM superfamily APT_01536 PF13282 APT_01536 APT_01537 PF13628 APT_01537 APT_01538 PF00593 TonB dependent receptor APT_01538 PF07715 TonB-dependent Receptor Plug Domain APT_01539 PF00924 Mechanosensitive ion channel APT_01539 PF05552 Conserved TM helix APT_01540 PF07995 Glucose / Sorbosone dehydrogenase APT_01543 PF02322 APT_01543 APT_01544 PF01654 APT_01544 APT_01545 PF00005 ABC transporter APT_01546 PF00005 ABC transporter APT_01546 PF00664 ABC transporter transmembrane region APT_01548 PF13640 2OG-Fe(II) oxygenase superfamily APT_01549 PF00593 TonB dependent receptor APT_01549 PF07715 TonB-dependent Receptor Plug Domain APT_01550 PF08238 Sel1 repeat APT_01553 PF00710 Asparaginase APT_01554 PF00155 Aminotransferase class I and II APT_01555 PF06826 APT_01555 APT_01556 PF00535 Glycosyl transferase family 2 APT_01557 PF05401 Nodulation protein S (NodS) APT_01558 PF02585 GlcNAc-PI de-N-acetylase APT_01562 PF00005 ABC transporter APT_01562 PF12848 ABC transporter APT_01563 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT_01563 PF03466 LysR substrate binding domain APT_01564 PF13403 Hint domain APT_01564 PF16168 APT_01564 APT_01565 PF00593 TonB dependent receptor APT_01565 PF07715 TonB-dependent Receptor Plug Domain APT_01566 PF00107 Zinc-binding dehydrogenase APT_01566 PF08240 Alcohol dehydrogenase GroES-like domain APT_01567 PF07080 Protein of unknown function (DUF1348) APT_01568 PF05974 Domain of unknown function (DUF892) APT_01570 PF02308 APT_01570 APT_01571 PF14542 GCN5-related N-acetyl-transferase APT_01572 PF06912 APT_01572 APT_01573 PF02515 CoA-transferase family III APT_01574 PF00205 Thiamine pyrophosphate enzyme, central domain APT_01574 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain APT_01574 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain APT_01575 PF02515 CoA-transferase family III APT_01577 PF13561 Enoyl-(Acyl carrier protein) reductase APT_01578 PF00440 Bacterial regulatory proteins, tetR family APT_01579 PF13561 Enoyl-(Acyl carrier protein) reductase APT_01580 PF10604 Polyketide cyclase / dehydrase and lipid transport APT_01582 PF07690 Major Facilitator Superfamily APT_01583 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain APT_01583 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I APT_01583 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II APT_01583 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III APT_01584 PF12464 Maltose acetyltransferase APT_01584 PF14602 Hexapeptide repeat of succinyl-transferase APT_01585 PF07081 Protein of unknown function (DUF1349) APT_01586 PF13403 Hint domain APT_01588 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT_01588 PF03466 LysR substrate binding domain APT_01589 PF00593 TonB dependent receptor APT_01589 PF07715 TonB-dependent Receptor Plug Domain APT_01590 PF11804 APT_01590 APT_01591 PF03929 APT_01591 APT_01593 PF00593 TonB dependent receptor APT_01593 PF07715 TonB-dependent Receptor Plug Domain APT_01594 PF04773 FecR protein APT_01594 PF16220 APT_01594 APT_01595 PF04542 Sigma-70 region 2 APT_01595 PF08281 Sigma-70, region 4 APT_01597 PF01988 APT_01597 APT_01599 PF00512 His Kinase A (phospho-acceptor) domain APT_01599 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APT_01600 PF00072 Response regulator receiver domain APT_01600 PF00486 Transcriptional regulatory protein, C terminal APT_01601 PF00873 AcrB/AcrD/AcrF family APT_01602 PF16576 APT_01602 APT_01603 PF02321 Outer membrane efflux protein APT_01606 PF13340 APT_01606 APT_01607 PF13586 APT_01607 APT_01610 PF02082 Transcriptional regulator APT_01611 PF07883 Cupin domain APT_01612 PF01370 NAD dependent epimerase/dehydratase family APT_01613 PF07883 Cupin domain APT_01614 PF07690 Major Facilitator Superfamily APT_01615 PF00593 TonB dependent receptor APT_01615 PF07715 TonB-dependent Receptor Plug Domain APT_01616 PF12833 Helix-turn-helix domain APT_01617 PF13347 MFS/sugar transport protein APT_01618 PF07262 Protein of unknown function (DUF1436) APT_01622 PF01850 PIN domain APT_01626 PF13340 APT_01626 APT_01627 PF00270 DEAD/DEAH box helicase APT_01628 PF08878 APT_01628 APT_01629 PF04471 Restriction endonuclease APT_01630 PF13508 Acetyltransferase (GNAT) domain APT_01637 PF01042 Endoribonuclease L-PSP APT_01638 PF13411 MerR HTH family regulatory protein APT_01641 PF01527 Transposase APT_01642 PF00665 Integrase core domain APT_01642 PF13276 APT_01642 APT_01643 PF00899 ThiF family APT_01643 PF14461 Prokaryotic E2 family B APT_01647 PF00665 Integrase core domain APT_01647 PF13276 APT_01647 APT_01648 PF01527 Transposase APT_01653 PF00892 EamA-like transporter family APT_01654 PF02311 AraC-like ligand binding domain APT_01654 PF12833 Helix-turn-helix domain APT_01655 PF01965 DJ-1/PfpI family APT_01655 PF12833 Helix-turn-helix domain APT_01656 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain APT_01656 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain APT_01659 PF07690 Major Facilitator Superfamily APT_01660 PF04245 APT_01660 APT_01662 PF10686 APT_01662 APT_01665 PF01527 Transposase APT_01666 PF00665 Integrase core domain APT_01666 PF13276 APT_01666 APT_01670 PF13276 APT_01670 APT_01671 PF01527 Transposase APT_01672 PF13936 Helix-turn-helix domain APT_01676 PF13489 Methyltransferase domain APT_01681 PF00717 Peptidase S24-like APT_01681 PF01381 Helix-turn-helix APT_01683 PF08378 APT_01683 APT_01684 PF02601 APT_01684 APT_01685 PF02609 Exonuclease VII small subunit APT_01689 PF12833 Helix-turn-helix domain APT_01690 PF13469 Sulfotransferase family APT_01691 PF13946 APT_01691 APT_01692 PF01757 APT_01692 APT_01693 PF07262 Protein of unknown function (DUF1436) APT_01703 PF00501 AMP-binding enzyme APT_01704 PF00550 Phosphopantetheine attachment site APT_01705 PF00155 Aminotransferase class I and II APT_01707 PF00781 Diacylglycerol kinase catalytic domain APT_01708 PF00149 Calcineurin-like phosphoesterase APT_01709 PF03739 APT_01709 APT_01710 PF03739 APT_01710 APT_01711 PF04116 APT_01711 APT_01712 PF12804 MobA-like NTP transferase domain APT_01713 PF13419 Haloacid dehalogenase-like hydrolase APT_01714 PF00132 Bacterial transferase hexapeptide (six repeats) APT_01714 PF12804 MobA-like NTP transferase domain APT_01714 PF14602 Hexapeptide repeat of succinyl-transferase APT_01715 PF01380 SIS domain APT_01715 PF13522 Glutamine amidotransferase domain APT_01716 PF11306 Protein of unknown function (DUF3108) APT_01717 PF01614 Bacterial transcriptional regulator APT_01717 PF09339 IclR helix-turn-helix domain APT_01718 PF00255 Glutathione peroxidase APT_01719 PF00005 ABC transporter APT_01720 PF02687 APT_01720 APT_01720 PF12704 MacB-like periplasmic core domain APT_01721 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) APT_01721 PF03129 Anticodon binding domain APT_01722 PF07521 RNA-metabolising metallo-beta-lactamase APT_01722 PF12706 Beta-lactamase superfamily domain APT_01723 PF03309 Type III pantothenate kinase APT_01724 PF02237 Biotin protein ligase C terminal domain APT_01724 PF03099 Biotin/lipoate A/B protein ligase family APT_01725 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains APT_01726 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains APT_01726 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus APT_01727 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L APT_01728 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 APT_01729 PF12838 4Fe-4S dicluster domain APT_01730 PF00146 NADH dehydrogenase APT_01731 PF00384 Molybdopterin oxidoreductase APT_01731 PF09326 APT_01731 APT_01731 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region APT_01731 PF13510 2Fe-2S iron-sulfur cluster binding domain APT_01732 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit APT_01732 PF10531 SLBB domain APT_01732 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region APT_01733 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin APT_01734 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit APT_01735 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit APT_01736 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit APT_01737 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 APT_01738 PF00216 Bacterial DNA-binding protein APT_01739 PF00004 ATPase family associated with various cellular activities (AAA) APT_01739 PF02190 ATP-dependent protease La (LON) domain APT_01739 PF05362 Lon protease (S16) C-terminal proteolytic domain APT_01740 PF06689 ClpX C4-type zinc finger APT_01740 PF07724 AAA domain (Cdc48 subfamily) APT_01740 PF10431 C-terminal, D2-small domain, of ClpB protein APT_01741 PF00574 Clp protease APT_01742 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase APT_01742 PF05697 Bacterial trigger factor protein (TF) APT_01742 PF05698 Bacterial trigger factor protein (TF) C-terminus APT_01743 PF01256 Carbohydrate kinase APT_01743 PF03853 YjeF-related protein N-terminus APT_01745 PF00270 DEAD/DEAH box helicase APT_01745 PF00271 Helicase conserved C-terminal domain APT_01746 PF05958 tRNA (Uracil-5-)-methyltransferase APT_01747 PF01521 Iron-sulphur cluster biosynthesis APT_01748 PF01883 Domain of unknown function DUF59 APT_01749 PF01592 NifU-like N terminal domain APT_01750 PF00266 Aminotransferase class-V APT_01751 PF01458 Uncharacterized protein family (UPF0051) APT_01752 PF00005 ABC transporter APT_01753 PF01458 Uncharacterized protein family (UPF0051) APT_01754 PF02082 Transcriptional regulator APT_01755 PF04286 APT_01755 APT_01756 PF00311 Phosphoenolpyruvate carboxylase APT_01757 PF12697 Alpha/beta hydrolase family APT_01758 PF00009 Elongation factor Tu GTP binding domain APT_01758 PF00679 Elongation factor G C-terminus APT_01758 PF03144 Elongation factor Tu domain 2 APT_01758 PF03764 Elongation factor G, domain IV APT_01758 PF14492 Elongation Factor G, domain II APT_01759 PF00830 Ribosomal L28 family APT_01761 PF00005 ABC transporter APT_01761 PF00664 ABC transporter transmembrane region APT_01762 PF00293 NUDIX domain APT_01763 PF01842 ACT domain APT_01763 PF01909 Nucleotidyltransferase domain APT_01763 PF01966 HD domain APT_01763 PF08335 GlnD PII-uridylyltransferase APT_01764 PF00488 MutS domain V APT_01764 PF01624 MutS domain I APT_01764 PF05188 MutS domain II APT_01764 PF05190 MutS family domain IV APT_01764 PF05192 MutS domain III APT_01765 PF13432 Tetratricopeptide repeat APT_01766 PF02074 Carboxypeptidase Taq (M32) metallopeptidase APT_01767 PF03022 Major royal jelly protein APT_01768 PF00291 Pyridoxal-phosphate dependent enzyme APT_01768 PF14821 Threonine synthase N terminus APT_01769 PF00675 Insulinase (Peptidase family M16) APT_01769 PF05193 Peptidase M16 inactive domain APT_01770 PF01523 Putative modulator of DNA gyrase APT_01771 PF04280 Tim44-like domain APT_01774 PF01040 UbiA prenyltransferase family APT_01775 PF00115 Cytochrome C and Quinol oxidase polypeptide I APT_01777 PF08241 Methyltransferase domain APT_01779 PF02951 Prokaryotic glutathione synthetase, N-terminal domain APT_01779 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain APT_01780 PF13231 APT_01780 APT_01781 PF00535 Glycosyl transferase family 2 APT_01781 PF04138 APT_01781 APT_01782 PF01037 AsnC family APT_01782 PF13404 AsnC-type helix-turn-helix domain APT_01783 PF07992 Pyridine nucleotide-disulphide oxidoreductase APT_01784 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT_01784 PF03466 LysR substrate binding domain APT_01785 PF05443 ROS/MUCR transcriptional regulator protein APT_01786 PF00216 Bacterial DNA-binding protein APT_01787 PF03167 Uracil DNA glycosylase superfamily APT_01788 PF03023 APT_01788 APT_01789 PF01594 APT_01789 APT_01790 PF05887 APT_01790 APT_01790 PF13411 MerR HTH family regulatory protein APT_01791 PF00216 Bacterial DNA-binding protein APT_01792 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal APT_01792 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III APT_01793 PF02504 Fatty acid synthesis protein APT_01794 PF01783 Ribosomal L32p protein family APT_01795 PF02620 APT_01795 APT_01796 PF04355 SmpA / OmlA family APT_01797 PF00512 His Kinase A (phospho-acceptor) domain APT_01797 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APT_01798 PF00072 Response regulator receiver domain APT_01798 PF00486 Transcriptional regulatory protein, C terminal APT_01799 PF12802 MarR family APT_01800 PF08511 COQ9 APT_01801 PF01327 Polypeptide deformylase APT_01802 PF01165 Ribosomal protein S21 APT_01803 PF00180 Isocitrate/isopropylmalate dehydrogenase APT_01804 PF00694 Aconitase C-terminal domain APT_01805 PF00330 Aconitase family (aconitate hydratase) APT_01806 PF01245 Ribosomal protein L19 APT_01807 PF01746 tRNA (Guanine-1)-methyltransferase APT_01808 PF01782 RimM N-terminal domain APT_01809 PF00886 Ribosomal protein S16 APT_01810 PF00448 SRP54-type protein, GTPase domain APT_01810 PF02881 SRP54-type protein, helical bundle domain APT_01810 PF02978 Signal peptide binding domain APT_01811 PF13801 Heavy-metal resistance APT_01812 PF07542 ATP12 chaperone protein APT_01813 PF05170 APT_01813 APT_01813 PF13502 APT_01813 APT_01814 PF00849 RNA pseudouridylate synthase APT_01815 PF00004 ATPase family associated with various cellular activities (AAA) APT_01815 PF12002 MgsA AAA+ ATPase C terminal APT_01815 PF16193 APT_01815 APT_01816 PF03548 Outer membrane lipoprotein carrier protein LolA APT_01817 PF01040 UbiA prenyltransferase family APT_01818 PF04452 RNA methyltransferase APT_01819 PF04107 Glutamate-cysteine ligase family 2(GCS2) APT_01820 PF07690 Major Facilitator Superfamily APT_01822 PF01926 50S ribosome-binding GTPase APT_01822 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal APT_01823 PF13360 PQQ-like domain APT_01824 PF09976 Tetratricopeptide repeat APT_01826 PF01075 Glycosyltransferase family 9 (heptosyltransferase) APT_01827 PF00534 Glycosyl transferases group 1 APT_01828 PF00733 Asparagine synthase APT_01828 PF13537 Glutamine amidotransferase domain APT_01829 PF01571 Aminomethyltransferase folate-binding domain APT_01829 PF08669 Glycine cleavage T-protein C-terminal barrel domain APT_01830 PF01502 Phosphoribosyl-AMP cyclohydrolase APT_01831 PF02684 APT_01831 APT_01832 PF00916 APT_01832 APT_01832 PF01740 STAS domain APT_01833 PF01794 APT_01833 APT_01834 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase APT_01834 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase APT_01835 PF00494 Squalene/phytoene synthase APT_01836 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain APT_01836 PF02777 Iron/manganese superoxide dismutases, C-terminal domain APT_01837 PF00004 ATPase family associated with various cellular activities (AAA) APT_01837 PF02861 Clp amino terminal domain APT_01837 PF07724 AAA domain (Cdc48 subfamily) APT_01837 PF10431 C-terminal, D2-small domain, of ClpB protein APT_01838 PF00293 NUDIX domain APT_01838 PF12535 Hydrolase of X-linked nucleoside diphosphate N terminal APT_01839 PF01926 50S ribosome-binding GTPase APT_01839 PF13167 APT_01839 APT_01839 PF16360 APT_01839 APT_01840 PF17209 APT_01840 APT_01841 PF00072 Response regulator receiver domain APT_01841 PF00158 Sigma-54 interaction domain APT_01841 PF02954 Bacterial regulatory protein, Fis family APT_01842 PF00512 His Kinase A (phospho-acceptor) domain APT_01842 PF00672 HAMP domain APT_01842 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APT_01843 PF00072 Response regulator receiver domain APT_01843 PF00158 Sigma-54 interaction domain APT_01843 PF02954 Bacterial regulatory protein, Fis family APT_01844 PF00512 His Kinase A (phospho-acceptor) domain APT_01844 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APT_01845 PF01207 Dihydrouridine synthase (Dus) APT_01846 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase APT_01846 PF02542 YgbB family APT_01847 PF00535 Glycosyl transferase family 2 APT_01848 PF00535 Glycosyl transferase family 2 APT_01851 PF03275 UDP-galactopyranose mutase APT_01851 PF13450 NAD(P)-binding Rossmann-like domain APT_01853 PF01370 NAD dependent epimerase/dehydratase family APT_01854 PF04800 ETC complex I subunit conserved region APT_01855 PF00156 Phosphoribosyl transferase domain APT_01856 PF00534 Glycosyl transferases group 1 APT_01857 PF14681 Uracil phosphoribosyltransferase APT_01860 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain APT_01860 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain APT_01860 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain APT_01861 PF01385 APT_01861 APT_01861 PF07282 APT_01861 APT_01861 PF12323 APT_01861 APT_01862 PF00543 Nitrogen regulatory protein P-II APT_01863 PF00132 Bacterial transferase hexapeptide (six repeats) APT_01863 PF06426 Serine acetyltransferase, N-terminal APT_01864 PF01494 FAD binding domain APT_01865 PF09335 APT_01865 APT_01873 PF01132 Elongation factor P (EF-P) OB domain APT_01873 PF08207 Elongation factor P (EF-P) KOW-like domain APT_01873 PF09285 Elongation factor P, C-terminal APT_01874 PF00459 Inositol monophosphatase family APT_01875 PF13307 Helicase C-terminal domain APT_01876 PF00313 'Cold-shock' DNA-binding domain APT_01877 PF01738 Dienelactone hydrolase family APT_01878 PF00166 Chaperonin 10 Kd subunit APT_01879 PF00118 TCP-1/cpn60 chaperonin family APT_01883 PF01609 Transposase DDE domain APT_01884 PF01501 Glycosyl transferase family 8 APT_01886 PF05598 APT_01886 APT_01891 PF00909 Ammonium Transporter Family APT_01893 PF13650 Aspartyl protease APT_01894 PF00561 alpha/beta hydrolase fold APT_01895 PF00589 Phage integrase family APT_01895 PF02899 Phage integrase, N-terminal SAM-like domain APT_01896 PF00270 DEAD/DEAH box helicase APT_01897 PF02699 Preprotein translocase subunit APT_01898 PF05673 Protein of unknown function (DUF815) APT_01899 PF00355 Rieske [2Fe-2S] domain APT_01900 PF13302 Acetyltransferase (GNAT) domain APT_01900 PF14815 NUDIX domain APT_01901 PF00483 Nucleotidyl transferase APT_01901 PF01050 Mannose-6-phosphate isomerase APT_01902 PF01053 Cys/Met metabolism PLP-dependent enzyme APT_01903 PF04379 Protein of unknown function (DUF525) APT_01904 PF01227 GTP cyclohydrolase I APT_01905 PF01965 DJ-1/PfpI family APT_01906 PF00994 Probable molybdopterin binding domain APT_01907 PF04966 Carbohydrate-selective porin, OprB family APT_01908 PF04966 Carbohydrate-selective porin, OprB family APT_01910 PF00149 Calcineurin-like phosphoesterase APT_01911 PF04632 APT_01911 APT_01912 PF07869 APT_01912 APT_01913 PF13437 HlyD family secretion protein APT_01913 PF13533 Biotin-lipoyl like APT_01915 PF11730 APT_01915 APT_01916 PF07992 Pyridine nucleotide-disulphide oxidoreductase APT_01917 PF03176 MMPL family APT_01918 PF03706 APT_01918 APT_01919 PF00885 6,7-dimethyl-8-ribityllumazine synthase APT_01920 PF00925 GTP cyclohydrolase II APT_01920 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase APT_01921 PF00677 Lumazine binding domain APT_01922 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region APT_01922 PF01872 RibD C-terminal domain APT_01924 PF00032 Cytochrome b(C-terminal)/b6/petD APT_01924 PF00033 Cytochrome b(N-terminal)/b6/petB APT_01925 PF02167 Cytochrome C1 family APT_01926 PF00355 Rieske [2Fe-2S] domain APT_01926 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal APT_01927 PF03358 NADPH-dependent FMN reductase APT_01929 PF07642 APT_01929 APT_01930 PF00860 Permease family APT_01933 PF07859 alpha/beta hydrolase fold APT_01934 PF13403 Hint domain APT_01935 PF00829 Ribosomal prokaryotic L21 protein APT_01936 PF01016 Ribosomal L27 protein APT_01937 PF01018 GTP1/OBG APT_01937 PF01926 50S ribosome-binding GTPase APT_01938 PF00696 Amino acid kinase family APT_01938 PF01472 PUA domain APT_01940 PF10073 APT_01940 APT_01941 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain APT_01941 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain APT_01943 PF07859 alpha/beta hydrolase fold APT_01945 PF02381 MraZ protein APT_01946 PF01795 MraW methylase family APT_01948 PF00905 Penicillin binding protein transpeptidase domain APT_01948 PF03717 Penicillin-binding Protein dimerisation domain APT_01949 PF01225 Mur ligase family, catalytic domain APT_01949 PF02875 Mur ligase family, glutamate ligase domain APT_01949 PF08245 Mur ligase middle domain APT_01950 PF01225 Mur ligase family, catalytic domain APT_01950 PF02875 Mur ligase family, glutamate ligase domain APT_01950 PF08245 Mur ligase middle domain APT_01951 PF00953 Glycosyl transferase family 4 APT_01951 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 APT_01952 PF08245 Mur ligase middle domain APT_01953 PF01098 APT_01953 APT_01954 PF03033 Glycosyltransferase family 28 N-terminal domain APT_01954 PF04101 Glycosyltransferase family 28 C-terminal domain APT_01955 PF01225 Mur ligase family, catalytic domain APT_01955 PF02875 Mur ligase family, glutamate ligase domain APT_01955 PF08245 Mur ligase middle domain APT_01956 PF01565 FAD binding domain APT_01956 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain APT_01957 PF01820 D-ala D-ala ligase N-terminus APT_01957 PF07478 D-ala D-ala ligase C-terminus APT_01958 PF03799 Cell division protein FtsQ APT_01958 PF08478 POTRA domain, FtsQ-type APT_01959 PF02491 SHS2 domain inserted in FTSA APT_01959 PF14450 Cell division protein FtsA APT_01960 PF00091 Tubulin/FtsZ family, GTPase domain APT_01960 PF12327 FtsZ family, C-terminal domain APT_01961 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase APT_01962 PF13525 Outer membrane lipoprotein APT_01963 PF02463 RecF/RecN/SMC N terminal domain APT_01964 PF00533 BRCA1 C Terminus (BRCT) domain APT_01964 PF01653 NAD-dependent DNA ligase adenylation domain APT_01964 PF03119 NAD-dependent DNA ligase C4 zinc finger domain APT_01964 PF03120 NAD-dependent DNA ligase OB-fold domain APT_01964 PF12826 Helix-hairpin-helix motif APT_01965 PF00391 PEP-utilising enzyme, mobile domain APT_01965 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain APT_01965 PF02896 PEP-utilising enzyme, TIM barrel domain APT_01966 PF03618 APT_01966 APT_01968 PF01205 Uncharacterized protein family UPF0029 APT_01968 PF09186 Domain of unknown function (DUF1949) APT_01970 PF01474 Class-II DAHP synthetase family APT_01973 PF00749 tRNA synthetases class I (E and Q), catalytic domain APT_01974 PF00857 Isochorismatase family APT_01976 PF00122 E1-E2 ATPase APT_01976 PF00403 Heavy-metal-associated domain APT_01976 PF00702 haloacid dehalogenase-like hydrolase APT_01978 PF00394 Multicopper oxidase APT_01978 PF07731 Multicopper oxidase APT_01978 PF07732 Multicopper oxidase APT_01979 PF05275 APT_01979 APT_01980 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain APT_01980 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain APT_01981 PF10369 Small subunit of acetolactate synthase APT_01981 PF13710 ACT domain APT_01982 PF00205 Thiamine pyrophosphate enzyme, central domain APT_01982 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain APT_01982 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain APT_01983 PF01715 IPP transferase APT_01984 PF12710 haloacid dehalogenase-like hydrolase APT_01986 PF06258 APT_01986 APT_01987 PF00270 DEAD/DEAH box helicase APT_01987 PF00271 Helicase conserved C-terminal domain APT_01988 PF13579 Glycosyl transferase 4-like domain APT_01988 PF13692 Glycosyl transferases group 1 APT_01989 PF00534 Glycosyl transferases group 1 APT_01990 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family APT_01991 PF00464 Serine hydroxymethyltransferase APT_01993 PF13520 Amino acid permease APT_01994 PF00490 Delta-aminolevulinic acid dehydratase APT_01995 PF04376 APT_01995 APT_01995 PF04377 APT_01995 APT_01996 PF00521 DNA gyrase/topoisomerase IV, subunit A APT_01996 PF03989 DNA gyrase C-terminal domain, beta-propeller APT_01997 PF02565 Recombination protein O C terminal APT_01997 PF11967 Recombination protein O N terminal APT_01998 PF00889 Elongation factor TS APT_01999 PF00318 Ribosomal protein S2 APT_02000 PF00355 Rieske [2Fe-2S] domain APT_02002 PF01063 Aminotransferase class IV APT_02003 PF00425 chorismate binding enzyme APT_02003 PF04715 Anthranilate synthase component I, N terminal region APT_02004 PF01336 OB-fold nucleic acid binding domain APT_02004 PF02811 PHP domain APT_02004 PF07733 Bacterial DNA polymerase III alpha subunit APT_02004 PF14579 Helix-hairpin-helix motif APT_02005 PF02569 Pantoate-beta-alanine ligase APT_02006 PF01042 Endoribonuclease L-PSP APT_02007 PF09084 NMT1/THI5 like APT_02008 PF00155 Aminotransferase class I and II APT_02009 PF00155 Aminotransferase class I and II APT_02010 PF00749 tRNA synthetases class I (E and Q), catalytic domain APT_02011 PF14279 APT_02011 APT_02013 PF00403 Heavy-metal-associated domain APT_02015 PF02310 B12 binding domain APT_02015 PF04055 Radical SAM superfamily APT_02016 PF00334 Nucleoside diphosphate kinase APT_02017 PF00005 ABC transporter APT_02017 PF12848 ABC transporter APT_02017 PF16326 APT_02017 APT_02018 PF01594 APT_02018 APT_02019 PF00072 Response regulator receiver domain APT_02019 PF00486 Transcriptional regulatory protein, C terminal APT_02020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APT_02021 PF04402 Protein of unknown function (DUF541) APT_02022 PF00707 Translation initiation factor IF-3, C-terminal domain APT_02022 PF05198 Translation initiation factor IF-3, N-terminal domain APT_02023 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) APT_02023 PF02824 TGS domain APT_02023 PF03129 Anticodon binding domain APT_02023 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain APT_02024 PF01075 Glycosyltransferase family 9 (heptosyltransferase) APT_02026 PF00534 Glycosyl transferases group 1 APT_02026 PF13439 Glycosyltransferase Family 4 APT_02027 PF01513 ATP-NAD kinase APT_02030 PF00075 RNase H APT_02031 PF01636 Phosphotransferase enzyme family APT_02032 PF02401 LytB protein APT_02035 PF03109 APT_02035 APT_02036 PF01432 Peptidase family M3 APT_02036 PF08439 Oligopeptidase F APT_02037 PF00310 Glutamine amidotransferases class-II APT_02037 PF01493 GXGXG motif APT_02037 PF01645 Conserved region in glutamate synthase APT_02037 PF04898 Glutamate synthase central domain APT_02038 PF07992 Pyridine nucleotide-disulphide oxidoreductase APT_02038 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster APT_02039 PF01370 NAD dependent epimerase/dehydratase family APT_02040 PF00892 EamA-like transporter family APT_02041 PF01520 N-acetylmuramoyl-L-alanine amidase APT_02042 PF10150 Ribonuclease E/G family APT_02043 PF01634 ATP phosphoribosyltransferase APT_02044 PF00815 Histidinol dehydrogenase APT_02045 PF01176 Translation initiation factor 1A / IF-1 APT_02046 PF02545 Maf-like protein APT_02047 PF10150 Ribonuclease E/G family APT_02048 PF03884 Domain of unknown function (DUF329) APT_02053 PF00959 Phage lysozyme APT_02058 PF06791 APT_02058 APT_02067 PF05065 Phage capsid family APT_02068 PF04586 APT_02068 APT_02069 PF04860 Phage portal protein APT_02070 PF03354 APT_02070 APT_02072 PF01844 HNH endonuclease APT_02073 PF11363 APT_02073 APT_02074 PF00589 Phage integrase family APT_02074 PF02899 Phage integrase, N-terminal SAM-like domain APT_02085 PF01479 S4 domain APT_02086 PF01381 Helix-turn-helix APT_02092 PF13560 Helix-turn-helix domain APT_02094 PF10073 APT_02094 APT_02095 PF10979 APT_02095 APT_02097 PF00589 Phage integrase family APT_02098 PF00034 Cytochrome c APT_02100 PF13561 Enoyl-(Acyl carrier protein) reductase APT_02101 PF00171 Aldehyde dehydrogenase family APT_02102 PF01565 FAD binding domain APT_02102 PF09330 D-lactate dehydrogenase, membrane binding APT_02103 PF10005 APT_02103 APT_02103 PF15887 APT_02103 APT_02104 PF01841 Transglutaminase-like superfamily APT_02104 PF08379 APT_02104 APT_02105 PF14403 APT_02105 APT_02106 PF04168 APT_02106 APT_02107 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain APT_02107 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain APT_02108 PF02445 Quinolinate synthetase A protein APT_02110 PF00440 Bacterial regulatory proteins, tetR family APT_02110 PF16925 APT_02110 APT_02111 PF07992 Pyridine nucleotide-disulphide oxidoreductase APT_02112 PF00171 Aldehyde dehydrogenase family APT_02114 PF07690 Major Facilitator Superfamily APT_02115 PF03928 Domain of unknown function (DUF336) APT_02116 PF03358 NADPH-dependent FMN reductase APT_02117 PF02678 Pirin APT_02117 PF05726 Pirin C-terminal cupin domain APT_02118 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT_02118 PF03466 LysR substrate binding domain APT_02120 PF02472 Biopolymer transport protein ExbD/TolR APT_02121 PF02472 Biopolymer transport protein ExbD/TolR APT_02122 PF01618 APT_02122 APT_02123 PF03544 Gram-negative bacterial TonB protein C-terminal APT_02124 PF00593 TonB dependent receptor APT_02124 PF07715 TonB-dependent Receptor Plug Domain APT_02125 PF07690 Major Facilitator Superfamily APT_02126 PF00892 EamA-like transporter family APT_02127 PF03746 LamB/YcsF family APT_02128 PF02626 Allophanate hydrolase subunit 2 APT_02129 PF02682 Allophanate hydrolase subunit 1 APT_02130 PF00106 short chain dehydrogenase APT_02131 PF00364 Biotin-requiring enzyme APT_02132 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain APT_02132 PF02785 Biotin carboxylase C-terminal domain APT_02132 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain APT_02133 PF00364 Biotin-requiring enzyme APT_02134 PF00155 Aminotransferase class I and II APT_02135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT_02135 PF03466 LysR substrate binding domain APT_02136 PF01425 Amidase APT_02137 PF00106 short chain dehydrogenase APT_02138 PF00128 Alpha amylase, catalytic domain APT_02139 PF00128 Alpha amylase, catalytic domain APT_02139 PF11941 Domain of unknown function (DUF3459) APT_02140 PF00128 Alpha amylase, catalytic domain APT_02140 PF02806 Alpha amylase, C-terminal all-beta domain APT_02140 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) APT_02141 PF00534 Glycosyl transferases group 1 APT_02141 PF08323 Starch synthase catalytic domain APT_02142 PF00128 Alpha amylase, catalytic domain APT_02142 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) APT_02144 PF13561 Enoyl-(Acyl carrier protein) reductase APT_02145 PF00205 Thiamine pyrophosphate enzyme, central domain APT_02145 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain APT_02145 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain APT_02146 PF01494 FAD binding domain APT_02147 PF02630 SCO1/SenC APT_02148 PF00593 TonB dependent receptor APT_02148 PF07715 TonB-dependent Receptor Plug Domain APT_02150 PF13403 Hint domain APT_02151 PF00239 Resolvase, N terminal domain APT_02151 PF07508 Recombinase APT_02151 PF13408 Recombinase zinc beta ribbon domain APT_02156 PF02384 N-6 DNA Methylase APT_02156 PF12161 HsdM N-terminal domain APT_02157 PF01420 Type I restriction modification DNA specificity domain APT_02158 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) APT_02158 PF04851 Type III restriction enzyme, res subunit APT_02159 PF01863 Protein of unknown function DUF45 APT_02160 PF08878 APT_02160 APT_02161 PF00270 DEAD/DEAH box helicase APT_02161 PF00271 Helicase conserved C-terminal domain APT_02162 PF11523 Protein of unknown function (DUF3223) APT_02163 PF10544 APT_02163 APT_02164 PF09386 Antitoxin ParD APT_02165 PF05016 Plasmid stabilisation system protein APT_02168 PF00293 NUDIX domain APT_02169 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT_02169 PF03466 LysR substrate binding domain APT_02170 PF04632 APT_02170 APT_02172 PF12146 Putative lysophospholipase APT_02173 PF10276 Zinc-finger domain APT_02174 PF11412 Disulphide bond corrector protein DsbC APT_02174 PF13899 Thioredoxin-like APT_02175 PF00893 Small Multidrug Resistance protein APT_02176 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) APT_02176 PF02403 Seryl-tRNA synthetase N-terminal domain APT_02177 PF00902 Sec-independent protein translocase protein (TatC) APT_02179 PF04079 Putative transcriptional regulators (Ypuh-like) APT_02180 PF02616 ScpA/B protein APT_02181 PF05036 Sporulation related domain APT_02182 PF00750 tRNA synthetases class I (R) APT_02182 PF03485 Arginyl tRNA synthetase N terminal domain APT_02182 PF05746 DALR anticodon binding domain APT_02183 PF01966 HD domain APT_02183 PF13286 Phosphohydrolase-associated domain APT_02184 PF01521 Iron-sulphur cluster biosynthesis APT_02185 PF03372 Endonuclease/Exonuclease/phosphatase family APT_02186 PF13641 Glycosyltransferase like family 2 APT_02187 PF06258 APT_02187 APT_02188 PF13440 APT_02188 APT_02188 PF14667 Polysaccharide biosynthesis C-terminal domain APT_02189 PF08042 APT_02189 APT_02190 PF12706 Beta-lactamase superfamily domain APT_02191 PF03070 TENA/THI-4/PQQC family APT_02192 PF05402 Coenzyme PQQ synthesis protein D (PqqD) APT_02193 PF04055 Radical SAM superfamily APT_02193 PF13186 Iron-sulfur cluster-binding domain APT_02193 PF13353 4Fe-4S single cluster domain APT_02195 PF00574 Clp protease APT_02197 PF00155 Aminotransferase class I and II APT_02198 PF00742 Homoserine dehydrogenase APT_02198 PF01842 ACT domain APT_02198 PF03447 Homoserine dehydrogenase, NAD binding domain APT_02199 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded APT_02200 PF01368 DHH family APT_02200 PF02272 DHHA1 domain APT_02201 PF00140 Sigma-70 factor, region 1 APT_02201 PF04542 Sigma-70 region 2 APT_02201 PF04545 Sigma-70, region 4 APT_02202 PF00849 RNA pseudouridylate synthase APT_02203 PF01032 FecCD transport family APT_02204 PF00005 ABC transporter APT_02205 PF02696 APT_02205 APT_02206 PF01063 Aminotransferase class IV APT_02207 PF00476 DNA polymerase family A APT_02207 PF01367 5'-3' exonuclease, C-terminal SAM fold APT_02207 PF01612 3'-5' exonuclease APT_02207 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain APT_02208 PF02630 SCO1/SenC APT_02209 PF01553 Acyltransferase APT_02210 PF07690 Major Facilitator Superfamily APT_02213 PF02322 APT_02213 APT_02214 PF01654 APT_02214 APT_02215 PF04261 Dyp-type peroxidase family APT_02216 PF04454 Encapsulating protein for peroxidase APT_02217 PF00324 Amino acid permease APT_02219 PF13360 PQQ-like domain APT_02220 PF13403 Hint domain APT_02221 PF14552 Tautomerase enzyme APT_02222 PF00202 Aminotransferase class-III APT_02223 PF00155 Aminotransferase class I and II APT_02223 PF00392 Bacterial regulatory proteins, gntR family APT_02224 PF01546 Peptidase family M20/M25/M40 APT_02224 PF07687 Peptidase dimerisation domain APT_02225 PF01180 Dihydroorotate dehydrogenase APT_02225 PF14697 4Fe-4S dicluster domain APT_02226 PF07992 Pyridine nucleotide-disulphide oxidoreductase APT_02226 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster APT_02227 PF00593 TonB dependent receptor APT_02227 PF07715 TonB-dependent Receptor Plug Domain APT_02228 PF13640 2OG-Fe(II) oxygenase superfamily APT_02229 PF01979 Amidohydrolase family APT_02230 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin APT_02231 PF00440 Bacterial regulatory proteins, tetR family APT_02231 PF08362 YcdC-like protein, C-terminal region APT_02232 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase APT_02233 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family APT_02234 PF06305 APT_02234 APT_02235 PF02556 Preprotein translocase subunit SecB APT_02237 PF04166 Pyridoxal phosphate biosynthetic protein PdxA APT_02238 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ APT_02240 PF03702 Uncharacterised protein family (UPF0075) APT_02242 PF00474 Sodium:solute symporter family APT_02244 PF13532 2OG-Fe(II) oxygenase superfamily APT_02245 PF00144 Beta-lactamase APT_02246 PF13560 Helix-turn-helix domain APT_02247 PF00042 Globin APT_02247 PF00175 Oxidoreductase NAD-binding domain APT_02247 PF00970 Oxidoreductase FAD-binding domain APT_02248 PF00528 Binding-protein-dependent transport system inner membrane component APT_02249 PF00005 ABC transporter APT_02250 PF03180 NLPA lipoprotein APT_02251 PF01565 FAD binding domain APT_02251 PF02913 FAD linked oxidases, C-terminal domain APT_02252 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases APT_02252 PF10414 Sirohaem synthase dimerisation region APT_02252 PF13241 Putative NAD(P)-binding APT_02252 PF14824 Sirohaem biosynthesis protein central APT_02253 PF07859 alpha/beta hydrolase fold APT_02254 PF01047 MarR family APT_02255 PF01425 Amidase APT_02256 PF01613 Flavin reductase like domain APT_02257 PF00596 Class II Aldolase and Adducin N-terminal domain APT_02258 PF02558 Ketopantoate reductase PanE/ApbA APT_02258 PF08546 Ketopantoate reductase PanE/ApbA C terminal APT_02259 PF00111 2Fe-2S iron-sulfur cluster binding domain APT_02259 PF00175 Oxidoreductase NAD-binding domain APT_02260 PF13561 Enoyl-(Acyl carrier protein) reductase APT_02261 PF00866 Ring hydroxylating beta subunit APT_02262 PF00355 Rieske [2Fe-2S] domain APT_02262 PF00848 Ring hydroxylating alpha subunit (catalytic domain) APT_02264 PF08028 Acyl-CoA dehydrogenase, C-terminal domain APT_02265 PF04966 Carbohydrate-selective porin, OprB family APT_02266 PF00171 Aldehyde dehydrogenase family APT_02267 PF13360 PQQ-like domain APT_02267 PF13442 Cytochrome C oxidase, cbb3-type, subunit III APT_02268 PF07690 Major Facilitator Superfamily APT_02269 PF13577 SnoaL-like domain APT_02270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT_02270 PF03466 LysR substrate binding domain APT_02271 PF00528 Binding-protein-dependent transport system inner membrane component APT_02272 PF00528 Binding-protein-dependent transport system inner membrane component APT_02273 PF13416 Bacterial extracellular solute-binding protein APT_02274 PF00005 ABC transporter APT_02274 PF08402 TOBE domain APT_02275 PF00171 Aldehyde dehydrogenase family APT_02276 PF13520 Amino acid permease APT_02277 PF07642 APT_02277 APT_02278 PF13640 2OG-Fe(II) oxygenase superfamily APT_02280 PF08238 Sel1 repeat APT_02281 PF00593 TonB dependent receptor APT_02281 PF07715 TonB-dependent Receptor Plug Domain APT_02282 PF01618 APT_02282 APT_02283 PF02472 Biopolymer transport protein ExbD/TolR APT_02284 PF03544 Gram-negative bacterial TonB protein C-terminal APT_02286 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT_02286 PF03466 LysR substrate binding domain APT_02287 PF00355 Rieske [2Fe-2S] domain APT_02289 PF00375 Sodium:dicarboxylate symporter family APT_02290 PF04966 Carbohydrate-selective porin, OprB family APT_02291 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) APT_02292 PF12318 APT_02292 APT_02293 PF05199 GMC oxidoreductase APT_02293 PF05834 APT_02293 APT_02294 PF13442 Cytochrome C oxidase, cbb3-type, subunit III APT_02295 PF00171 Aldehyde dehydrogenase family APT_02296 PF07690 Major Facilitator Superfamily APT_02297 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase APT_02298 PF02277 Phosphoribosyltransferase APT_02299 PF02654 APT_02299 APT_02300 PF00155 Aminotransferase class I and II APT_02301 PF03186 APT_02301 APT_02302 PF00881 Nitroreductase family APT_02303 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain APT_02303 PF07685 CobB/CobQ-like glutamine amidotransferase domain APT_02304 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP APT_02304 PF12557 Cob(I)alamin adenosyltransferase N terminal APT_02305 PF00300 Histidine phosphatase superfamily (branch 1) APT_02306 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain APT_02306 PF07685 CobB/CobQ-like glutamine amidotransferase domain APT_02307 PF02514 APT_02307 APT_02308 PF02492 CobW/HypB/UreG, nucleotide-binding domain APT_02308 PF07683 Cobalamin synthesis protein cobW C-terminal domain APT_02309 PF07845 APT_02309 APT_02311 PF01047 MarR family APT_02312 PF04632 APT_02312 APT_02313 PF01184 APT_02313 APT_02314 PF16113 APT_02314 APT_02315 PF01613 Flavin reductase like domain APT_02317 PF00950 APT_02317 APT_02318 PF00005 ABC transporter APT_02319 PF01297 Periplasmic solute binding protein family APT_02320 PF01475 Ferric uptake regulator family APT_02323 PF01008 Initiation factor 2 subunit family APT_02324 PF04073 Aminoacyl-tRNA editing domain APT_02325 PF10030 APT_02325 APT_02326 PF00291 Pyridoxal-phosphate dependent enzyme APT_02327 PF00117 Glutamine amidotransferase class-I APT_02327 PF00958 GMP synthase C terminal domain APT_02327 PF02540 NAD synthase APT_02329 PF00083 Sugar (and other) transporter APT_02330 PF01464 Transglycosylase SLT domain APT_02331 PF02652 APT_02331 APT_02332 PF03992 Antibiotic biosynthesis monooxygenase APT_02333 PF01370 NAD dependent epimerase/dehydratase family APT_02334 PF01790 APT_02334 APT_02335 PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase APT_02336 PF02578 Multi-copper polyphenol oxidoreductase laccase APT_02338 PF01464 Transglycosylase SLT domain APT_02338 PF05036 Sporulation related domain APT_02339 PF01061 APT_02339 APT_02340 PF00005 ABC transporter APT_02341 PF02694 APT_02341 APT_02342 PF01544 CorA-like Mg2+ transporter protein APT_02344 PF00155 Aminotransferase class I and II APT_02345 PF12796 Ankyrin repeats (3 copies) APT_02345 PF13857 Ankyrin repeats (many copies) APT_02346 PF00456 Transketolase, thiamine diphosphate binding domain APT_02346 PF02779 Transketolase, pyrimidine binding domain APT_02346 PF02780 Transketolase, C-terminal domain APT_02347 PF00342 Phosphoglucose isomerase APT_02347 PF00923 Transaldolase APT_02348 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain APT_02348 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase APT_02349 PF08282 haloacid dehalogenase-like hydrolase APT_02350 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase APT_02351 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) APT_02352 PF13671 AAA domain APT_02355 PF01497 Periplasmic binding protein APT_02356 PF00571 CBS domain APT_02356 PF00654 Voltage gated chloride channel APT_02357 PF00107 Zinc-binding dehydrogenase APT_02358 PF01168 Alanine racemase, N-terminal domain APT_02359 PF02705 APT_02359 APT_02360 PF04055 Radical SAM superfamily APT_02360 PF06969 HemN C-terminal domain APT_02361 PF07370 APT_02361 APT_02363 PF00005 ABC transporter APT_02364 PF00005 ABC transporter APT_02364 PF12399 Branched-chain amino acid ATP-binding cassette transporter APT_02365 PF02653 APT_02365 APT_02366 PF02653 APT_02366 APT_02367 PF13433 Periplasmic binding protein domain APT_02368 PF00072 Response regulator receiver domain APT_02368 PF00512 His Kinase A (phospho-acceptor) domain APT_02368 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APT_02369 PF00072 Response regulator receiver domain APT_02369 PF00196 Bacterial regulatory proteins, luxR family APT_02372 PF02492 CobW/HypB/UreG, nucleotide-binding domain APT_02373 PF01730 UreF APT_02374 PF02814 UreE urease accessory protein, N-terminal domain APT_02374 PF05194 UreE urease accessory protein, C-terminal domain APT_02375 PF00449 Urease alpha-subunit, N-terminal domain APT_02375 PF01979 Amidohydrolase family APT_02376 PF00699 Urease beta subunit APT_02377 PF00547 Urease, gamma subunit APT_02378 PF01774 UreD urease accessory protein APT_02379 PF03824 APT_02379 APT_02380 PF00205 Thiamine pyrophosphate enzyme, central domain APT_02380 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain APT_02380 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain APT_02381 PF00300 Histidine phosphatase superfamily (branch 1) APT_02383 PF13387 APT_02383 APT_02384 PF00210 Ferritin-like domain APT_02385 PF03960 ArsC family APT_02387 PF03352 Methyladenine glycosylase APT_02388 PF01022 Bacterial regulatory protein, arsR family APT_02389 PF00578 AhpC/TSA family APT_02389 PF10417 C-terminal domain of 1-Cys peroxiredoxin APT_02390 PF00753 Metallo-beta-lactamase superfamily APT_02391 PF01925 APT_02391 APT_02392 PF00916 APT_02392 APT_02392 PF01740 STAS domain APT_02393 PF03960 ArsC family APT_02395 PF02321 Outer membrane efflux protein APT_02396 PF00529 HlyD family secretion protein APT_02396 PF16576 APT_02396 APT_02397 PF07690 Major Facilitator Superfamily APT_02398 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT_02398 PF03466 LysR substrate binding domain APT_02399 PF04966 Carbohydrate-selective porin, OprB family APT_02400 PF07690 Major Facilitator Superfamily APT_02402 PF12697 Alpha/beta hydrolase family APT_02403 PF00857 Isochorismatase family APT_02405 PF00034 Cytochrome c APT_02405 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase APT_02405 PF13442 Cytochrome C oxidase, cbb3-type, subunit III APT_02406 PF00111 2Fe-2S iron-sulfur cluster binding domain APT_02406 PF01799 [2Fe-2S] binding domain APT_02407 PF01494 FAD binding domain APT_02408 PF01047 MarR family APT_02410 PF16363 APT_02410 APT_02411 PF02643 Uncharacterized ACR, COG1430 APT_02412 PF00753 Metallo-beta-lactamase superfamily APT_02413 PF10116 APT_02413 APT_02414 PF02625 XdhC and CoxI family APT_02414 PF13478 XdhC Rossmann domain APT_02415 PF12804 MobA-like NTP transferase domain APT_02416 PF01042 Endoribonuclease L-PSP APT_02417 PF05257 CHAP domain APT_02418 PF02347 Glycine cleavage system P-protein APT_02419 PF01597 Glycine cleavage H-protein APT_02420 PF01571 Aminomethyltransferase folate-binding domain APT_02420 PF08669 Glycine cleavage T-protein C-terminal barrel domain APT_02422 PF01564 Spermine/spermidine synthase APT_02422 PF17284 APT_02422 APT_02423 PF02675 S-adenosylmethionine decarboxylase APT_02425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT_02425 PF03466 LysR substrate binding domain APT_02426 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD APT_02427 PF01467 Cytidylyltransferase APT_02428 PF00521 DNA gyrase/topoisomerase IV, subunit A APT_02428 PF03989 DNA gyrase C-terminal domain, beta-propeller APT_02429 PF01679 APT_02429 APT_02431 PF00013 KH domain APT_02431 PF00575 S1 RNA binding domain APT_02431 PF01138 3' exoribonuclease family, domain 1 APT_02431 PF03725 3' exoribonuclease family, domain 2 APT_02431 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain APT_02432 PF00312 Ribosomal protein S15 APT_02433 PF01509 TruB family pseudouridylate synthase (N terminal domain) APT_02433 PF09157 Pseudouridine synthase II TruB, C-terminal APT_02433 PF16198 APT_02433 APT_02434 PF02405 APT_02434 APT_02435 PF00005 ABC transporter APT_02436 PF02470 APT_02436 APT_02437 PF03886 Protein of unknown function (DUF330) APT_02438 PF00534 Glycosyl transferases group 1 APT_02438 PF12000 APT_02438 APT_02439 PF07538 APT_02439 APT_02440 PF00534 Glycosyl transferases group 1 APT_02440 PF13641 Glycosyltransferase like family 2 APT_02441 PF08238 Sel1 repeat APT_02442 PF13437 HlyD family secretion protein APT_02442 PF13533 Biotin-lipoyl like APT_02443 PF00005 ABC transporter APT_02443 PF00664 ABC transporter transmembrane region APT_02445 PF00809 Pterin binding enzyme APT_02445 PF02310 B12 binding domain APT_02445 PF02574 Homocysteine S-methyltransferase APT_02445 PF02607 B12 binding domain APT_02445 PF02965 Vitamin B12 dependent methionine synthase, activation domain APT_02447 PF02674 APT_02447 APT_02448 PF00156 Phosphoribosyl transferase domain APT_02448 PF13537 Glutamine amidotransferase domain APT_02449 PF03886 Protein of unknown function (DUF330) APT_02450 PF02470 APT_02450 APT_02451 PF04403 APT_02451 APT_02452 PF02366 APT_02452 APT_02453 PF00535 Glycosyl transferase family 2 APT_02454 PF00430 ATP synthase B/B' CF(0) APT_02455 PF00430 ATP synthase B/B' CF(0) APT_02456 PF00137 ATP synthase subunit C APT_02457 PF00119 ATP synthase A chain APT_02458 PF09527 APT_02458 APT_02460 PF00448 SRP54-type protein, GTPase domain APT_02460 PF02881 SRP54-type protein, helical bundle domain APT_02461 PF00919 Uncharacterized protein family UPF0004 APT_02461 PF04055 Radical SAM superfamily APT_02462 PF01678 Diaminopimelate epimerase APT_02463 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily APT_02465 PF00270 DEAD/DEAH box helicase APT_02465 PF00271 Helicase conserved C-terminal domain APT_02465 PF03880 DbpA RNA binding domain APT_02467 PF00450 Serine carboxypeptidase APT_02468 PF00380 Ribosomal protein S9/S16 APT_02469 PF00572 Ribosomal protein L13 APT_02471 PF13460 NADH(P)-binding APT_02472 PF01895 PhoU domain APT_02473 PF00005 ABC transporter APT_02474 PF00528 Binding-protein-dependent transport system inner membrane component APT_02475 PF00528 Binding-protein-dependent transport system inner membrane component APT_02476 PF00920 Dehydratase family APT_02479 PF00107 Zinc-binding dehydrogenase APT_02479 PF08240 Alcohol dehydrogenase GroES-like domain APT_02480 PF13515 APT_02480 APT_02481 PF13180 PDZ domain APT_02481 PF13365 Trypsin-like peptidase domain APT_02483 PF13472 GDSL-like Lipase/Acylhydrolase family APT_02484 PF10129 APT_02484 APT_02485 PF01883 Domain of unknown function DUF59 APT_02485 PF10609 ParA/MinD ATPase like APT_02488 PF02511 Thymidylate synthase complementing protein APT_02489 PF04386 Stringent starvation protein B APT_02490 PF05681 APT_02490 APT_02490 PF05683 Fumarase C-terminus APT_02491 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily APT_02492 PF10091 Putative glucoamylase APT_02494 PF01266 FAD dependent oxidoreductase APT_02495 PF00842 Alanine racemase, C-terminal domain APT_02495 PF01168 Alanine racemase, N-terminal domain APT_02496 PF01037 AsnC family APT_02496 PF13412 Winged helix-turn-helix DNA-binding APT_02497 PF02033 Ribosome-binding factor A APT_02498 PF00009 Elongation factor Tu GTP binding domain APT_02498 PF04760 Translation initiation factor IF-2, N-terminal region APT_02498 PF08364 APT_02498 APT_02498 PF11987 Translation-initiation factor 2 APT_02499 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family APT_02499 PF04296 Protein of unknown function (DUF448) APT_02500 PF00575 S1 RNA binding domain APT_02500 PF08529 NusA N-terminal domain APT_02500 PF13184 NusA-like KH domain APT_02500 PF14520 Helix-hairpin-helix domain APT_02501 PF02576 Uncharacterised BCR, YhbC family COG0779 APT_02501 PF17384 APT_02501 APT_02503 PF07724 AAA domain (Cdc48 subfamily) APT_02505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT_02505 PF03466 LysR substrate binding domain APT_02506 PF00497 Bacterial extracellular solute-binding proteins, family 3 APT_02506 PF00528 Binding-protein-dependent transport system inner membrane component APT_02507 PF00005 ABC transporter APT_02508 PF00330 Aconitase family (aconitate hydratase) APT_02508 PF00694 Aconitase C-terminal domain APT_02509 PF00005 ABC transporter APT_02510 PF03379 APT_02510 APT_02511 PF10938 YfdX protein APT_02512 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain APT_02512 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain APT_02513 PF03631 APT_02513 APT_02514 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel APT_02515 PF01220 Dehydroquinase class II APT_02516 PF00364 Biotin-requiring enzyme APT_02517 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain APT_02517 PF02785 Biotin carboxylase C-terminal domain APT_02517 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain APT_02518 PF00083 Sugar (and other) transporter APT_02519 PF01964 ThiC family APT_02519 PF13667 ThiC-associated domain APT_02521 PF13473 Cupredoxin-like domain APT_02522 PF03239 APT_02522 APT_02523 PF10634 Fe2+ transport protein APT_02524 PF04966 Carbohydrate-selective porin, OprB family APT_02525 PF09490 APT_02525 APT_02526 PF09489 APT_02526 APT_02527 PF04966 Carbohydrate-selective porin, OprB family APT_02528 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT_02528 PF03466 LysR substrate binding domain APT_02529 PF00202 Aminotransferase class-III APT_02530 PF01387 Synuclein APT_02531 PF03652 Uncharacterised protein family (UPF0081) APT_02532 PF02686 Glu-tRNAGln amidotransferase C subunit APT_02533 PF01425 Amidase APT_02534 PF02637 GatB domain APT_02534 PF02934 GatB/GatE catalytic domain APT_02535 PF00005 ABC transporter APT_02535 PF00664 ABC transporter transmembrane region APT_02536 PF00633 Helix-hairpin-helix motif APT_02536 PF00730 HhH-GPD superfamily base excision DNA repair protein APT_02537 PF00762 Ferrochelatase APT_02538 PF00730 HhH-GPD superfamily base excision DNA repair protein APT_02538 PF14815 NUDIX domain APT_02539 PF05258 APT_02539 APT_02541 PF01464 Transglycosylase SLT domain APT_02541 PF05036 Sporulation related domain APT_02542 PF12100 APT_02542 APT_02543 PF00133 tRNA synthetases class I (I, L, M and V) APT_02543 PF08264 Anticodon-binding domain of tRNA APT_02543 PF13603 Leucyl-tRNA synthetase, Domain 2 APT_02544 PF04390 Lipopolysaccharide-assembly APT_02545 PF06144 DNA polymerase III, delta subunit APT_02547 PF02321 Outer membrane efflux protein APT_02548 PF00440 Bacterial regulatory proteins, tetR family APT_02548 PF14246 AefR-like transcriptional repressor, C-terminal region APT_02549 PF00766 Electron transfer flavoprotein FAD-binding domain APT_02549 PF01012 Electron transfer flavoprotein domain APT_02550 PF01012 Electron transfer flavoprotein domain APT_02551 PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase APT_02551 PF13450 NAD(P)-binding Rossmann-like domain APT_02553 PF04055 Radical SAM superfamily APT_02553 PF06969 HemN C-terminal domain APT_02554 PF03922 OmpW family APT_02555 PF00027 Cyclic nucleotide-binding domain APT_02555 PF13545 Crp-like helix-turn-helix domain APT_02556 PF13180 PDZ domain APT_02556 PF13365 Trypsin-like peptidase domain APT_02557 PF14437 APT_02557 APT_02559 PF07722 Peptidase C26 APT_02560 PF00849 RNA pseudouridylate synthase APT_02560 PF01479 S4 domain APT_02561 PF03602 Conserved hypothetical protein 95 APT_02562 PF00436 Single-strand binding protein family APT_02563 PF04932 APT_02563 APT_02564 PF01258 Prokaryotic dksA/traR C4-type zinc finger APT_02565 PF00589 Phage integrase family APT_02567 PF00239 Resolvase, N terminal domain APT_02567 PF02796 Helix-turn-helix domain of resolvase APT_02569 PF00534 Glycosyl transferases group 1 APT_02571 PF00579 tRNA synthetases class I (W and Y) APT_02572 PF01523 Putative modulator of DNA gyrase APT_02573 PF00300 Histidine phosphatase superfamily (branch 1) APT_02575 PF16363 APT_02575 APT_02576 PF00483 Nucleotidyl transferase APT_02577 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase APT_02578 PF04321 RmlD substrate binding domain APT_02579 PF00535 Glycosyl transferase family 2 APT_02580 PF01580 FtsK/SpoIIIE family APT_02580 PF09397 Ftsk gamma domain APT_02580 PF13491 APT_02580 APT_02581 PF00849 RNA pseudouridylate synthase APT_02582 PF00534 Glycosyl transferases group 1 APT_02582 PF13439 Glycosyltransferase Family 4 APT_02583 PF13409 Glutathione S-transferase, N-terminal domain APT_02584 PF03054 tRNA methyl transferase APT_02585 PF00111 2Fe-2S iron-sulfur cluster binding domain APT_02586 PF00266 Aminotransferase class-V APT_02587 PF00266 Aminotransferase class-V APT_02589 PF12146 Putative lysophospholipase APT_02590 PF00588 SpoU rRNA Methylase family APT_02591 PF01406 tRNA synthetases class I (C) catalytic domain APT_02591 PF09190 DALR domain APT_02592 PF08245 Mur ligase middle domain APT_02593 PF01039 Carboxyl transferase domain APT_02594 PF00085 Thioredoxin APT_02595 PF00580 UvrD/REP helicase N-terminal domain APT_02595 PF12705 PD-(D/E)XK nuclease superfamily APT_02595 PF13361 UvrD-like helicase C-terminal domain APT_02596 PF12705 PD-(D/E)XK nuclease superfamily APT_02597 PF02367 Uncharacterised P-loop hydrolase UPF0079 APT_02598 PF00072 Response regulator receiver domain APT_02598 PF00486 Transcriptional regulatory protein, C terminal APT_02599 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain APT_02599 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I APT_02599 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II APT_02599 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III APT_02600 PF00809 Pterin binding enzyme APT_02601 PF00004 ATPase family associated with various cellular activities (AAA) APT_02601 PF01434 Peptidase family M41 APT_02601 PF06480 FtsH Extracellular APT_02602 PF01171 PP-loop family APT_02604 PF00691 OmpA family APT_02605 PF04052 TolB amino-terminal domain APT_02605 PF07676 WD40-like Beta Propeller Repeat APT_02607 PF02472 Biopolymer transport protein ExbD/TolR APT_02608 PF01618 APT_02608 APT_02609 PF13279 Thioesterase-like superfamily APT_02610 PF05491 Holliday junction DNA helicase ruvB C-terminus APT_02610 PF05496 Holliday junction DNA helicase ruvB N-terminus APT_02611 PF01330 RuvA N terminal domain APT_02611 PF07499 RuvA, C-terminal domain APT_02611 PF14520 Helix-hairpin-helix domain APT_02612 PF02075 Crossover junction endodeoxyribonuclease RuvC APT_02613 PF01709 Transcriptional regulator APT_02614 PF01043 SecA preprotein cross-linking domain APT_02614 PF02810 SEC-C motif APT_02614 PF07516 SecA Wing and Scaffold domain APT_02614 PF07517 SecA DEAD-like domain APT_02615 PF13616 PPIC-type PPIASE domain APT_02616 PF01960 ArgJ family APT_02617 PF06271 APT_02617 APT_02618 PF00924 Mechanosensitive ion channel APT_02619 PF10014 2OG-Fe dioxygenase APT_02622 PF00226 DnaJ domain APT_02622 PF01556 DnaJ C terminal domain APT_02624 PF04380 APT_02624 APT_02625 PF10722 Putative bacterial sensory transduction regulator APT_02626 PF03807 NADP oxidoreductase coenzyme F420-dependent APT_02626 PF14748 Pyrroline-5-carboxylate reductase dimerisation APT_02628 PF05977 Transmembrane secretion effector APT_02629 PF00216 Bacterial DNA-binding protein APT_02630 PF05045 APT_02630 APT_02631 PF00534 Glycosyl transferases group 1 APT_02631 PF13579 Glycosyl transferase 4-like domain APT_02631 PF13692 Glycosyl transferases group 1 APT_02633 PF00535 Glycosyl transferase family 2 APT_02633 PF13524 Glycosyl transferases group 1 APT_02634 PF00795 Carbon-nitrogen hydrolase APT_02634 PF02540 NAD synthase APT_02635 PF00475 Imidazoleglycerol-phosphate dehydratase APT_02636 PF00117 Glutamine amidotransferase class-I APT_02637 PF00583 Acetyltransferase (GNAT) family APT_02637 PF00977 Histidine biosynthesis protein APT_02638 PF00977 Histidine biosynthesis protein APT_02639 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase APT_02640 PF01230 HIT domain APT_02641 PF00881 Nitroreductase family APT_02642 PF01494 FAD binding domain APT_02643 PF13811 APT_02643 APT_02644 PF06146 APT_02644 APT_02646 PF00043 Glutathione S-transferase, C-terminal domain APT_02646 PF02798 Glutathione S-transferase, N-terminal domain APT_02647 PF02195 ParB-like nuclease domain APT_02648 PF13614 AAA domain APT_02649 PF02527 rRNA small subunit methyltransferase G APT_02650 PF01134 Glucose inhibited division protein A APT_02650 PF13932 GidA associated domain 3 APT_02651 PF01926 50S ribosome-binding GTPase APT_02651 PF10396 GTP-binding protein TrmE N-terminus APT_02651 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE APT_02652 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain APT_02656 PF03641 Possible lysine decarboxylase APT_02657 PF07690 Major Facilitator Superfamily APT_02659 PF03653 APT_02659 APT_02660 PF13419 Haloacid dehalogenase-like hydrolase APT_02661 PF01208 Uroporphyrinogen decarboxylase (URO-D) APT_02662 PF02545 Maf-like protein APT_10001 PF04796 APT_10001 APT_10003 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain APT_10004 PF04851 Type III restriction enzyme, res subunit APT_10005 PF02195 ParB-like nuclease domain APT_10006 PF13560 Helix-turn-helix domain APT_10007 PF04365 Protein of unknown function (DUF497) APT_10009 PF13569 APT_10009 APT_10010 PF13586 APT_10010 APT_10011 PF05443 ROS/MUCR transcriptional regulator protein APT_10019 PF00436 Single-strand binding protein family APT_10022 PF04014 Antidote-toxin recognition MazE APT_10023 PF01850 PIN domain APT_10032 PF02498 APT_10032 APT_10033 PF00216 Bacterial DNA-binding protein APT_10034 PF00239 Resolvase, N terminal domain APT_10035 PF13403 Hint domain APT_10037 PF08751 TrwC relaxase APT_10037 PF13604 AAA domain APT_10041 PF01810 APT_10041 APT_10042 PF06666 APT_10042 APT_10044 PF05443 ROS/MUCR transcriptional regulator protein APT_10045 PF04355 SmpA / OmlA family APT_10046 PF13403 Hint domain APT_10047 PF00239 Resolvase, N terminal domain APT_10047 PF13384 Homeodomain-like domain APT_10049 PF09565 APT_10049 APT_10050 PF02452 PemK-like protein APT_10053 PF04221 RelB antitoxin APT_10055 PF15937 APT_10055 APT_10056 PF11663 APT_10056 APT_10058 PF09394 Chagasin family peptidase inhibitor I42 APT_10059 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system APT_10060 PF00593 TonB dependent receptor APT_10060 PF07715 TonB-dependent Receptor Plug Domain APT_10062 PF03544 Gram-negative bacterial TonB protein C-terminal APT_10063 PF01609 Transposase DDE domain APT_10063 PF05598 APT_10063 APT_10064 PF00291 Pyridoxal-phosphate dependent enzyme APT_10065 PF01527 Transposase APT_10066 PF01548 APT_10066 APT_10066 PF02371 APT_10066 APT_10067 PF13333 APT_10067 APT_10068 PF13683 APT_10068 APT_10069 PF02630 SCO1/SenC APT_10070 PF03929 APT_10070 APT_10071 PF00593 TonB dependent receptor APT_10071 PF07715 TonB-dependent Receptor Plug Domain APT_10074 PF00005 ABC transporter APT_10074 PF06472 APT_10074 APT_10075 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) APT_10075 PF03129 Anticodon binding domain APT_10075 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain APT_10076 PF01475 Ferric uptake regulator family APT_10077 PF08856 APT_10077 APT_10078 PF01227 GTP cyclohydrolase I APT_10079 PF01502 Phosphoribosyl-AMP cyclohydrolase APT_10080 PF02492 CobW/HypB/UreG, nucleotide-binding domain APT_10080 PF07683 Cobalamin synthesis protein cobW C-terminal domain APT_10082 PF03428 APT_10082 APT_10082 PF11800 APT_10082 APT_10084 PF02661 Fic/DOC family APT_10088 PF04221 RelB antitoxin APT_10092 PF06527 APT_10092 APT_10093 PF05621 APT_10093 APT_10094 PF00665 Integrase core domain APT_10094 PF09039 Mu DNA binding, I gamma subdomain APT_10094 PF09299 Mu transposase, C-terminal APT_10096 PF00239 Resolvase, N terminal domain APT_10097 PF03352 Methyladenine glycosylase APT_10098 PF13532 2OG-Fe(II) oxygenase superfamily APT_10099 PF09859 APT_10099 APT_10100 PF09859 APT_10100 APT_10101 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain APT_10101 PF02805 Metal binding domain of Ada APT_10101 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain APT_10101 PF12833 Helix-turn-helix domain APT_10102 PF07366 SnoaL-like polyketide cyclase APT_10103 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily APT_10104 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT_10104 PF03466 LysR substrate binding domain APT_10105 PF00248 Aldo/keto reductase family APT_10106 PF00248 Aldo/keto reductase family APT_10107 PF02583 Metal-sensitive transcriptional repressor APT_10108 PF00107 Zinc-binding dehydrogenase APT_10108 PF08240 Alcohol dehydrogenase GroES-like domain APT_10110 PF00756 Putative esterase APT_10112 PF00593 TonB dependent receptor APT_10112 PF07715 TonB-dependent Receptor Plug Domain APT_10113 PF03929 APT_10113 APT_10114 PF02630 SCO1/SenC APT_10115 PF06821 Serine hydrolase APT_10118 PF13354 Beta-lactamase enzyme family APT_10119 PF07366 SnoaL-like polyketide cyclase APT_10120 PF13683 APT_10120 APT_10121 PF13586 APT_10121 APT_10122 PF13340 APT_10122 APT_10123 PF00654 Voltage gated chloride channel APT_10124 PF02082 Transcriptional regulator APT_10125 PF11158 APT_10125 APT_10126 PF12833 Helix-turn-helix domain APT_10127 PF00106 short chain dehydrogenase APT_10128 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT_10128 PF03466 LysR substrate binding domain APT_10129 PF03795 YCII-related domain APT_10130 PF00753 Metallo-beta-lactamase superfamily APT_10132 PF00665 Integrase core domain APT_10133 PF13276 APT_10133 APT_10134 PF01527 Transposase APT_10137 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT_10137 PF03466 LysR substrate binding domain APT_10138 PF01717 Cobalamin-independent synthase, Catalytic domain APT_10139 PF08908 APT_10139 APT_10140 PF00355 Rieske [2Fe-2S] domain APT_10144 PF13737 APT_10144 APT_10146 PF13586 APT_10146 APT_10148 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) APT_10149 PF00239 Resolvase, N terminal domain APT_10149 PF02796 Helix-turn-helix domain of resolvase APT_10150 PF05443 ROS/MUCR transcriptional regulator protein APT_10152 PF01223 DNA/RNA non-specific endonuclease APT_10154 PF11663 APT_10154 APT_10155 PF15937 APT_10155 APT_10156 PF01037 AsnC family APT_10156 PF13412 Winged helix-turn-helix DNA-binding APT_10157 PF01810 APT_10157 APT_10158 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT_10158 PF03466 LysR substrate binding domain APT_10159 PF03547 APT_10159 APT_10160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT_10160 PF03466 LysR substrate binding domain APT_10161 PF13561 Enoyl-(Acyl carrier protein) reductase APT_10162 PF00501 AMP-binding enzyme APT_10162 PF13193 AMP-binding enzyme C-terminal domain APT_10162 PF16177 APT_10162 APT_10163 PF13738 Pyridine nucleotide-disulphide oxidoreductase APT_10165 PF00534 Glycosyl transferases group 1 APT_10165 PF13579 Glycosyl transferase 4-like domain APT_10166 PF00586 AIR synthase related protein, N-terminal domain APT_10166 PF02769 AIR synthase related protein, C-terminal domain APT_10167 PF13673 Acetyltransferase (GNAT) domain APT_10168 PF04055 Radical SAM superfamily APT_10169 PF00795 Carbon-nitrogen hydrolase APT_10171 PF00155 Aminotransferase class I and II APT_10171 PF00392 Bacterial regulatory proteins, gntR family APT_10173 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT_10173 PF03466 LysR substrate binding domain APT_10174 PF07690 Major Facilitator Superfamily APT_10175 PF13347 MFS/sugar transport protein APT_10176 PF13347 MFS/sugar transport protein APT_10177 PF00724 NADH:flavin oxidoreductase / NADH oxidase family APT_10178 PF00106 short chain dehydrogenase APT_10179 PF12833 Helix-turn-helix domain APT_10180 PF00149 Calcineurin-like phosphoesterase APT_10181 PF00106 short chain dehydrogenase APT_10182 PF00440 Bacterial regulatory proteins, tetR family APT_10183 PF13409 Glutathione S-transferase, N-terminal domain APT_10183 PF13410 Glutathione S-transferase, C-terminal domain APT_10184 PF00440 Bacterial regulatory proteins, tetR family APT_10185 PF00561 alpha/beta hydrolase fold APT_10186 PF07690 Major Facilitator Superfamily APT_10187 PF13561 Enoyl-(Acyl carrier protein) reductase APT_10188 PF00440 Bacterial regulatory proteins, tetR family APT_10189 PF13561 Enoyl-(Acyl carrier protein) reductase APT_10190 PF10604 Polyketide cyclase / dehydrase and lipid transport APT_10191 PF13586 APT_10191 APT_10192 PF13245 Part of AAA domain APT_10192 PF13361 UvrD-like helicase C-terminal domain APT_10194 PF00817 impB/mucB/samB family APT_10195 PF07733 Bacterial DNA polymerase III alpha subunit APT_10195 PF14579 Helix-hairpin-helix motif APT_10196 PF02801 Beta-ketoacyl synthase, C-terminal domain APT_10197 PF00011 Hsp20/alpha crystallin family APT_10198 PF06146 APT_10198 APT_10201 PF00589 Phage integrase family APT_10201 PF02899 Phage integrase, N-terminal SAM-like domain APT_20001 PF13403 Hint domain APT_20002 PF01527 Transposase APT_20003 PF00665 Integrase core domain APT_20003 PF13276 APT_20003 APT_20004 PF00239 Resolvase, N terminal domain APT_20004 PF02796 Helix-turn-helix domain of resolvase APT_20006 PF13730 APT_20006 APT_30002 PF03389 MobA/MobL family APT_40001 PF01446 APT_40001