APT_00006 SM00464 Found in ATP-dependent protease La (LON) APT_00013 SM00932 Scaffold protein Nfu/NifU N terminal APT_00017 SM01209 APT_00017 APT_00017 SM01210 APT_00017 APT_00022 SM00829 Enoylreductase APT_00025 SM01002 Alanine dehydrogenase/PNT, C-terminal domain APT_00025 SM01003 Alanine dehydrogenase/PNT, N-terminal domain APT_00026 SM00859 Semialdehyde dehydrogenase, NAD binding domain APT_00034 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain APT_00035 SM00861 Transketolase, pyrimidine binding domain APT_00040 SM00382 ATPases associated with a variety of cellular activities APT_00048 SM00382 ATPases associated with a variety of cellular activities APT_00050 SM00493 APT_00050 APT_00052 SM00905 Dihydroneopterin aldolase APT_00056 SM00316 Ribosomal protein S1-like RNA-binding domain APT_00063 SM00937 APT_00063 APT_00074 SM00917 LeuA allosteric (dimerisation) domain APT_00078 SM00387 Histidine kinase-like ATPases APT_00078 SM00388 His Kinase A (phosphoacceptor) domain APT_00078 SM00448 cheY-homologous receiver domain APT_00082 SM00986 Uracil DNA glycosylase superfamily APT_00082 SM00987 UreE urease accessory protein, C-terminal domain APT_00084 SM00564 beta-propeller repeat APT_00092 SM00490 helicase superfamily c-terminal domain APT_00094 SM00347 helix_turn_helix multiple antibiotic resistance protein APT_00104 SM00490 helicase superfamily c-terminal domain APT_00108 SM00919 Malic enzyme, NAD binding domain APT_00108 SM01274 APT_00108 APT_00109 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. APT_00109 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. APT_00114 SM00382 ATPases associated with a variety of cellular activities APT_00117 SM00341 Helicase and RNase D C-terminal APT_00117 SM00474 3'-5' exonuclease APT_00122 SM00382 ATPases associated with a variety of cellular activities APT_00128 SM00342 helix_turn_helix, arabinose operon control protein APT_00136 SM00357 Cold shock protein domain APT_00144 SM00421 helix_turn_helix, Lux Regulon APT_00144 SM00448 cheY-homologous receiver domain APT_00145 SM00387 Histidine kinase-like ATPases APT_00145 SM00388 His Kinase A (phosphoacceptor) domain APT_00145 SM00448 cheY-homologous receiver domain APT_00149 SM00382 ATPases associated with a variety of cellular activities APT_00150 SM00382 ATPases associated with a variety of cellular activities APT_00157 SM00422 helix_turn_helix, mercury resistance APT_00170 SM00347 helix_turn_helix multiple antibiotic resistance protein APT_00184 SM00028 Tetratricopeptide repeats APT_00189 SM00867 YceI-like domain APT_00192 SM00382 ATPases associated with a variety of cellular activities APT_00196 SM00271 DnaJ molecular chaperone homology domain APT_00221 SM00487 DEAD-like helicases superfamily APT_00221 SM00490 helicase superfamily c-terminal domain APT_00241 SM01133 APT_00241 APT_00252 SM00382 ATPases associated with a variety of cellular activities APT_00252 SM01086 C-terminal, D2-small domain, of ClpB protein APT_00258 SM00387 Histidine kinase-like ATPases APT_00258 SM00388 His Kinase A (phosphoacceptor) domain APT_00259 SM00448 cheY-homologous receiver domain APT_00259 SM00862 Transcriptional regulatory protein, C terminal APT_00262 SM00271 DnaJ molecular chaperone homology domain APT_00266 SM00798 AICARFT/IMPCHase bienzyme APT_00266 SM00851 MGS-like domain APT_00273 SM00530 Helix-turn-helix XRE-family like proteins APT_00278 SM00357 Cold shock protein domain APT_00278 SM00382 ATPases associated with a variety of cellular activities APT_00278 SM00959 Rho termination factor, N-terminal domain APT_00284 SM00382 ATPases associated with a variety of cellular activities APT_00286 SM00788 Adenylosuccinate synthetase APT_00287 SM00448 cheY-homologous receiver domain APT_00287 SM00862 Transcriptional regulatory protein, C terminal APT_00288 SM00387 Histidine kinase-like ATPases APT_00288 SM00388 His Kinase A (phosphoacceptor) domain APT_00294 SM01091 Transporter associated domain APT_00295 SM00829 Enoylreductase APT_00296 SM00382 ATPases associated with a variety of cellular activities APT_00300 SM00822 APT_00300 APT_00301 SM00859 Semialdehyde dehydrogenase, NAD binding domain APT_00304 SM00387 Histidine kinase-like ATPases APT_00320 SM00477 DNA/RNA non-specific endonuclease APT_00320 SM00892 DNA/RNA non-specific endonuclease APT_00323 SM00530 Helix-turn-helix XRE-family like proteins APT_00343 SM00450 Rhodanese Homology Domain APT_00359 SM00729 Elongator protein 3, MiaB family, Radical SAM APT_00362 SM00861 Transketolase, pyrimidine binding domain APT_00364 SM01091 Transporter associated domain APT_00366 SM00986 Uracil DNA glycosylase superfamily APT_00366 SM00987 UreE urease accessory protein, C-terminal domain APT_00367 SM00028 Tetratricopeptide repeats APT_00375 SM00382 ATPases associated with a variety of cellular activities APT_00377 SM01400 APT_00377 APT_00378 SM00855 Phosphoglycerate mutase family APT_00386 SM00822 APT_00386 APT_00394 SM00382 ATPases associated with a variety of cellular activities APT_00401 SM00421 helix_turn_helix, Lux Regulon APT_00427 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain APT_00448 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. APT_00452 SM00974 APT_00452 APT_00467 SM00530 Helix-turn-helix XRE-family like proteins APT_00473 SM00857 Resolvase, N terminal domain APT_00475 SM00729 Elongator protein 3, MiaB family, Radical SAM APT_00481 SM00450 Rhodanese Homology Domain APT_00514 SM00822 APT_00514 APT_00525 SM00882 Coenzyme A transferase APT_00531 SM00893 Electron transfer flavoprotein domain APT_00532 SM00893 Electron transfer flavoprotein domain APT_00543 SM00861 Transketolase, pyrimidine binding domain APT_00548 SM00320 WD40 repeats APT_00549 SM00833 Cobalamin synthesis protein cobW C-terminal domain APT_00575 SM01329 APT_00575 APT_00578 SM00938 Nitrogen regulatory protein P-II APT_00579 SM01230 APT_00579 APT_00581 SM00564 beta-propeller repeat APT_00584 SM00838 Elongation factor G C-terminus APT_00587 SM00487 DEAD-like helicases superfamily APT_00587 SM00490 helicase superfamily c-terminal domain APT_00589 SM00947 Carbonic anhydrase APT_00592 SM01409 APT_00592 APT_00593 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. APT_00593 SM00954 Region found in RelA / SpoT proteins APT_00596 SM00358 Double-stranded RNA binding motif APT_00596 SM00535 Ribonuclease III family APT_00603 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. APT_00605 SM00935 Outer membrane protein (OmpH-like) APT_00628 SM00382 ATPases associated with a variety of cellular activities APT_00631 SM00116 Domain in cystathionine beta-synthase and other proteins. APT_00632 SM00474 3'-5' exonuclease APT_00633 SM00967 RNA 2'-O ribose methyltransferase substrate binding APT_00636 SM00072 Guanylate kinase homologues. APT_00643 SM00382 ATPases associated with a variety of cellular activities APT_00646 SM00382 ATPases associated with a variety of cellular activities APT_00653 SM00345 helix_turn_helix gluconate operon transcriptional repressor APT_00653 SM00895 APT_00653 APT_00671 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. APT_00672 SM00487 DEAD-like helicases superfamily APT_00672 SM00490 helicase superfamily c-terminal domain APT_00672 SM00847 Helicase associated domain (HA2) Add an annotation APT_00682 SM01007 Class II Aldolase and Adducin N-terminal domain APT_00685 SM00904 Riboflavin kinase APT_00689 SM00853 MutL C terminal dimerisation domain APT_00689 SM01340 APT_00689 APT_00693 SM00387 Histidine kinase-like ATPases APT_00693 SM00433 TopoisomeraseII APT_00700 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. APT_00700 SM00245 tail specific protease APT_00701 SM00955 APT_00701 APT_00702 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain APT_00702 SM00437 Bacterial DNA topoisomerase I DNA-binding domain APT_00702 SM00493 APT_00702 APT_00704 SM01207 APT_00704 APT_00711 SM00861 Transketolase, pyrimidine binding domain APT_00716 SM00996 S-adenosyl-L-homocysteine hydrolase APT_00716 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain APT_00718 SM00563 Phosphate acyltransferases APT_00721 SM00849 Metallo-beta-lactamase superfamily APT_00731 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain APT_00738 SM00852 Probable molybdopterin binding domain APT_00747 SM00855 Phosphoglycerate mutase family APT_00748 SM00978 APT_00748 APT_00750 SM01235 APT_00750 APT_00751 SM00463 Small MutS-related domain APT_00796 SM00717 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains APT_00805 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor APT_00806 SM00829 Enoylreductase APT_00816 SM00479 APT_00816 APT_00827 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain APT_00863 SM00448 cheY-homologous receiver domain APT_00863 SM00862 Transcriptional regulatory protein, C terminal APT_00864 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain APT_00864 SM00387 Histidine kinase-like ATPases APT_00864 SM00388 His Kinase A (phosphoacceptor) domain APT_00868 SM00649 Ribosomal protein L11/L12 APT_00873 SM00663 RNA polymerase I subunit A N-terminus APT_00877 SM01403 APT_00877 APT_00881 SM01382 APT_00881 APT_00881 SM01383 APT_00881 APT_00884 SM00322 K homology RNA-binding domain APT_00888 SM01374 APT_00888 APT_00889 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. APT_00902 SM00662 RNA polymerases D APT_00906 SM00382 ATPases associated with a variety of cellular activities APT_00921 SM00382 ATPases associated with a variety of cellular activities APT_00924 SM00382 ATPases associated with a variety of cellular activities APT_00929 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. APT_00929 SM00245 tail specific protease APT_00934 SM00851 MGS-like domain APT_00934 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain APT_00935 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain APT_00937 SM00400 zinc finger APT_00937 SM00493 APT_00937 APT_00944 SM00650 Ribosomal RNA adenine dimethylases APT_00950 SM00382 ATPases associated with a variety of cellular activities APT_00951 SM00345 helix_turn_helix gluconate operon transcriptional repressor APT_00951 SM00895 APT_00951 APT_00959 SM00028 Tetratricopeptide repeats APT_00960 SM01058 CarD-like/TRCF domain APT_00965 SM00382 ATPases associated with a variety of cellular activities APT_00968 SM00387 Histidine kinase-like ATPases APT_00968 SM00388 His Kinase A (phosphoacceptor) domain APT_00969 SM00091 PAS domain APT_00969 SM00387 Histidine kinase-like ATPases APT_00969 SM00388 His Kinase A (phosphoacceptor) domain APT_00969 SM00448 cheY-homologous receiver domain APT_00971 SM00382 ATPases associated with a variety of cellular activities APT_00971 SM01086 C-terminal, D2-small domain, of ClpB protein APT_00973 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain APT_00980 SM00873 B3/4 domain APT_00980 SM00874 tRNA synthetase B5 domain APT_00980 SM00896 Ferredoxin-fold anticodon binding domain APT_00984 SM00100 Cyclic nucleotide-monophosphate binding domain APT_00986 SM00363 S4 RNA-binding domain APT_00986 SM01390 APT_00986 APT_00989 SM01329 APT_00989 APT_00996 SM01001 AIR carboxylase APT_01017 SM00855 Phosphoglycerate mutase family APT_01018 SM00830 Chorismate mutase type II APT_01022 SM00968 SMC proteins Flexible Hinge Domain APT_01024 SM00116 Domain in cystathionine beta-synthase and other proteins. APT_01024 SM01091 Transporter associated domain APT_01027 SM00729 Elongator protein 3, MiaB family, Radical SAM APT_01028 SM00563 Phosphate acyltransferases APT_01033 SM00278 Helix-hairpin-helix DNA-binding motif class 1 APT_01033 SM00465 GIY-YIG type nucleases (URI domain) APT_01043 SM00852 Probable molybdopterin binding domain APT_01046 SM01192 APT_01046 APT_01046 SM01193 APT_01046 APT_01052 SM00487 DEAD-like helicases superfamily APT_01052 SM00490 helicase superfamily c-terminal domain APT_01054 SM00487 DEAD-like helicases superfamily APT_01054 SM00490 helicase superfamily c-terminal domain APT_01054 SM00982 APT_01054 APT_01054 SM01058 CarD-like/TRCF domain APT_01058 SM00327 von Willebrand factor (vWF) type A domain APT_01060 SM00271 DnaJ molecular chaperone homology domain APT_01066 SM00729 Elongator protein 3, MiaB family, Radical SAM APT_01076 SM00530 Helix-turn-helix XRE-family like proteins APT_01079 SM00937 APT_01079 APT_01090 SM00936 Penicillin-binding protein 5, C-terminal domain APT_01095 SM00849 Metallo-beta-lactamase superfamily APT_01105 SM00729 Elongator protein 3, MiaB family, Radical SAM APT_01105 SM00876 Biotin and Thiamin Synthesis associated domain APT_01119 SM00825 Beta-ketoacyl synthase APT_01122 SM00822 APT_01122 APT_01123 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. APT_01129 SM00357 Cold shock protein domain APT_01131 SM01130 APT_01131 APT_01137 SM00382 ATPases associated with a variety of cellular activities APT_01139 SM00450 Rhodanese Homology Domain APT_01142 SM00155 Phospholipase D. Active site motifs. APT_01148 SM01211 APT_01148 APT_01152 SM00998 Adenylosuccinate lyase C-terminus APT_01160 SM00729 Elongator protein 3, MiaB family, Radical SAM APT_01163 SM00861 Transketolase, pyrimidine binding domain APT_01175 SM00387 Histidine kinase-like ATPases APT_01175 SM00433 TopoisomeraseII APT_01177 SM00480 DNA polymerase III beta subunit APT_01178 SM00382 ATPases associated with a variety of cellular activities APT_01178 SM00760 Bacterial dnaA protein helix-turn-helix domain APT_01181 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain APT_01181 SM01232 APT_01181 APT_01186 SM00382 ATPases associated with a variety of cellular activities APT_01194 SM01040 BRO family, N-terminal domain APT_01205 SM00507 HNH nucleases APT_01215 SM00530 Helix-turn-helix XRE-family like proteins APT_01220 SM00954 Region found in RelA / SpoT proteins APT_01235 SM00420 helix_turn_helix, Deoxyribose operon repressor APT_01235 SM01134 APT_01235 APT_01236 SM00341 Helicase and RNase D C-terminal APT_01236 SM00487 DEAD-like helicases superfamily APT_01236 SM00490 helicase superfamily c-terminal domain APT_01236 SM00956 APT_01236 APT_01238 SM00382 ATPases associated with a variety of cellular activities APT_01239 SM00382 ATPases associated with a variety of cellular activities APT_01240 SM00387 Histidine kinase-like ATPases APT_01244 SM00448 cheY-homologous receiver domain APT_01245 SM00382 ATPases associated with a variety of cellular activities APT_01247 SM00829 Enoylreductase APT_01255 SM00382 ATPases associated with a variety of cellular activities APT_01266 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain APT_01267 SM01092 CO dehydrogenase flavoprotein C-terminal domain APT_01282 SM00382 ATPases associated with a variety of cellular activities APT_01296 SM01060 APT_01296 APT_01299 SM01068 Putative carbohydrate binding domain APT_01306 SM00382 ATPases associated with a variety of cellular activities APT_01321 SM00342 helix_turn_helix, arabinose operon control protein APT_01330 SM00965 Secretin and TonB N terminus short domain APT_01333 SM00965 Secretin and TonB N terminus short domain APT_01336 SM00062 Bacterial periplasmic substrate-binding proteins APT_01337 SM00382 ATPases associated with a variety of cellular activities APT_01355 SM00382 ATPases associated with a variety of cellular activities APT_01359 SM00796 Allophanate hydrolase subunit 1 APT_01359 SM00797 Allophanate hydrolase subunit 2 APT_01359 SM00878 Biotin carboxylase C-terminal domain APT_01367 SM00382 ATPases associated with a variety of cellular activities APT_01371 SM00529 Helix-turn-helix diphteria tox regulatory element APT_01381 SM00342 helix_turn_helix, arabinose operon control protein APT_01383 SM00833 Cobalamin synthesis protein cobW C-terminal domain APT_01385 SM00822 APT_01385 APT_01386 SM00342 helix_turn_helix, arabinose operon control protein APT_01389 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain APT_01390 SM01092 CO dehydrogenase flavoprotein C-terminal domain APT_01393 SM00382 ATPases associated with a variety of cellular activities APT_01403 SM00903 Flavin reductase like domain APT_01416 SM00487 DEAD-like helicases superfamily APT_01421 SM00822 APT_01421 APT_01421 SM00823 Phosphopantetheine attachment site APT_01421 SM00825 Beta-ketoacyl synthase APT_01421 SM00826 APT_01421 APT_01421 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. APT_01421 SM00829 Enoylreductase APT_01429 SM00220 Serine/Threonine protein kinases, catalytic domain APT_01433 SM00530 Helix-turn-helix XRE-family like proteins APT_01443 SM00857 Resolvase, N terminal domain APT_01460 SM00886 Stress responsive A/B Barrel Domain APT_01465 SM00564 beta-propeller repeat APT_01478 SM00890 Domain of unknown function APT_01487 SM00852 Probable molybdopterin binding domain APT_01491 SM00926 Molybdopterin oxidoreductase Fe4S4 domain APT_01498 SM00861 Transketolase, pyrimidine binding domain APT_01499 SM00363 S4 RNA-binding domain APT_01507 SM00448 cheY-homologous receiver domain APT_01507 SM00862 Transcriptional regulatory protein, C terminal APT_01511 SM00116 Domain in cystathionine beta-synthase and other proteins. APT_01511 SM01240 APT_01511 APT_01515 SM00382 ATPases associated with a variety of cellular activities APT_01516 SM00382 ATPases associated with a variety of cellular activities APT_01518 SM00014 Acid phosphatase homologues APT_01536 SM00729 Elongator protein 3, MiaB family, Radical SAM APT_01545 SM00382 ATPases associated with a variety of cellular activities APT_01546 SM00382 ATPases associated with a variety of cellular activities APT_01548 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. APT_01550 SM00671 Sel1-like repeats. APT_01553 SM00870 APT_01553 APT_01562 SM00382 ATPases associated with a variety of cellular activities APT_01566 SM00829 Enoylreductase APT_01584 SM01266 APT_01584 APT_01593 SM00965 Secretin and TonB N terminus short domain APT_01599 SM00387 Histidine kinase-like ATPases APT_01599 SM00388 His Kinase A (phosphoacceptor) domain APT_01600 SM00448 cheY-homologous receiver domain APT_01600 SM00862 Transcriptional regulatory protein, C terminal APT_01616 SM00342 helix_turn_helix, arabinose operon control protein APT_01627 SM00487 DEAD-like helicases superfamily APT_01627 SM00490 helicase superfamily c-terminal domain APT_01638 SM00422 helix_turn_helix, mercury resistance APT_01654 SM00342 helix_turn_helix, arabinose operon control protein APT_01655 SM00342 helix_turn_helix, arabinose operon control protein APT_01681 SM00530 Helix-turn-helix XRE-family like proteins APT_01689 SM00342 helix_turn_helix, arabinose operon control protein APT_01717 SM00346 helix_turn_helix isocitrate lyase regulation APT_01719 SM00382 ATPases associated with a variety of cellular activities APT_01722 SM00849 Metallo-beta-lactamase superfamily APT_01731 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region APT_01732 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region APT_01738 SM00411 bacterial (prokaryotic) histone like domain APT_01739 SM00382 ATPases associated with a variety of cellular activities APT_01739 SM00464 Found in ATP-dependent protease La (LON) APT_01740 SM00382 ATPases associated with a variety of cellular activities APT_01740 SM00994 ClpX C4-type zinc finger APT_01740 SM01086 C-terminal, D2-small domain, of ClpB protein APT_01745 SM00487 DEAD-like helicases superfamily APT_01745 SM00490 helicase superfamily c-terminal domain APT_01752 SM00382 ATPases associated with a variety of cellular activities APT_01758 SM00838 Elongation factor G C-terminus APT_01758 SM00889 Elongation factor G, domain IV APT_01761 SM00382 ATPases associated with a variety of cellular activities APT_01763 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. APT_01764 SM00533 DNA-binding domain of DNA mismatch repair MUTS family APT_01764 SM00534 ATPase domain of DNA mismatch repair MUTS family APT_01765 SM00028 Tetratricopeptide repeats APT_01771 SM00978 APT_01771 APT_01782 SM00344 helix_turn_helix ASNC type APT_01786 SM00411 bacterial (prokaryotic) histone like domain APT_01787 SM00986 Uracil DNA glycosylase superfamily APT_01787 SM00987 UreE urease accessory protein, C-terminal domain APT_01790 SM00422 helix_turn_helix, mercury resistance APT_01791 SM00411 bacterial (prokaryotic) histone like domain APT_01797 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain APT_01797 SM00387 Histidine kinase-like ATPases APT_01797 SM00388 His Kinase A (phosphoacceptor) domain APT_01798 SM00448 cheY-homologous receiver domain APT_01798 SM00862 Transcriptional regulatory protein, C terminal APT_01799 SM00347 helix_turn_helix multiple antibiotic resistance protein APT_01803 SM01329 APT_01803 APT_01810 SM00382 ATPases associated with a variety of cellular activities APT_01810 SM00962 SRP54-type protein, GTPase domain APT_01810 SM00963 SRP54-type protein, helical bundle domain APT_01814 SM00363 S4 RNA-binding domain APT_01815 SM00382 ATPases associated with a variety of cellular activities APT_01822 SM00382 ATPases associated with a variety of cellular activities APT_01823 SM00564 beta-propeller repeat APT_01837 SM00382 ATPases associated with a variety of cellular activities APT_01837 SM01086 C-terminal, D2-small domain, of ClpB protein APT_01841 SM00382 ATPases associated with a variety of cellular activities APT_01841 SM00448 cheY-homologous receiver domain APT_01842 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain APT_01842 SM00387 Histidine kinase-like ATPases APT_01842 SM00388 His Kinase A (phosphoacceptor) domain APT_01843 SM00382 ATPases associated with a variety of cellular activities APT_01843 SM00448 cheY-homologous receiver domain APT_01844 SM00091 PAS domain APT_01844 SM00387 Histidine kinase-like ATPases APT_01844 SM00388 His Kinase A (phosphoacceptor) domain APT_01860 SM00984 UDP binding domain APT_01862 SM00938 Nitrogen regulatory protein P-II APT_01863 SM00971 Serine acetyltransferase, N-terminal APT_01873 SM00841 Elongation factor P, C-terminal APT_01873 SM01185 APT_01873 APT_01875 SM00491 APT_01875 APT_01876 SM00357 Cold shock protein domain APT_01878 SM00883 Chaperonin 10 Kd subunit APT_01896 SM00487 DEAD-like helicases superfamily APT_01896 SM00490 helicase superfamily c-terminal domain APT_01897 SM01323 APT_01897 APT_01906 SM00852 Probable molybdopterin binding domain APT_01938 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase APT_01959 SM00842 Cell division protein FtsA APT_01960 SM00864 Tubulin/FtsZ family, GTPase domain APT_01960 SM00865 Tubulin/FtsZ family, C-terminal domain APT_01964 SM00292 breast cancer carboxy-terminal domain APT_01964 SM00532 Ligase N family APT_01987 SM00487 DEAD-like helicases superfamily APT_01987 SM00490 helicase superfamily c-terminal domain APT_01994 SM01004 Delta-aminolevulinic acid dehydratase APT_01996 SM00434 DNA Topoisomerase IV APT_02004 SM00481 DNA polymerase alpha chain like domain APT_02011 SM00507 HNH nucleases APT_02015 SM00729 Elongator protein 3, MiaB family, Radical SAM APT_02016 SM00562 APT_02016 APT_02017 SM00382 ATPases associated with a variety of cellular activities APT_02019 SM00448 cheY-homologous receiver domain APT_02019 SM00862 Transcriptional regulatory protein, C terminal APT_02020 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain APT_02020 SM00387 Histidine kinase-like ATPases APT_02023 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain APT_02025 SM00028 Tetratricopeptide repeats APT_02041 SM00646 APT_02041 APT_02042 SM00316 Ribosomal protein S1-like RNA-binding domain APT_02045 SM00316 Ribosomal protein S1-like RNA-binding domain APT_02072 SM00507 HNH nucleases APT_02086 SM00530 Helix-turn-helix XRE-family like proteins APT_02092 SM00530 Helix-turn-helix XRE-family like proteins APT_02104 SM00460 Transglutaminase/protease-like homologues APT_02128 SM00797 Allophanate hydrolase subunit 2 APT_02129 SM00796 Allophanate hydrolase subunit 1 APT_02132 SM00878 Biotin carboxylase C-terminal domain APT_02138 SM00642 Alpha-amylase domain APT_02139 SM00642 Alpha-amylase domain APT_02140 SM00642 Alpha-amylase domain APT_02142 SM00642 Alpha-amylase domain APT_02151 SM00857 Resolvase, N terminal domain APT_02158 SM00487 DEAD-like helicases superfamily APT_02161 SM00487 DEAD-like helicases superfamily APT_02161 SM00490 helicase superfamily c-terminal domain APT_02163 SM00974 APT_02163 APT_02182 SM00836 DALR anticodon binding domain APT_02182 SM01016 Arginyl tRNA synthetase N terminal dom APT_02183 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. APT_02193 SM00729 Elongator protein 3, MiaB family, Radical SAM APT_02202 SM00363 S4 RNA-binding domain APT_02204 SM00382 ATPases associated with a variety of cellular activities APT_02207 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs APT_02207 SM00474 3'-5' exonuclease APT_02207 SM00475 5'-3' exonuclease APT_02207 SM00482 DNA polymerase A domain APT_02209 SM00563 Phosphate acyltransferases APT_02219 SM00564 beta-propeller repeat APT_02223 SM00345 helix_turn_helix gluconate operon transcriptional repressor APT_02228 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. APT_02233 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family APT_02246 SM00530 Helix-turn-helix XRE-family like proteins APT_02249 SM00382 ATPases associated with a variety of cellular activities APT_02254 SM00347 helix_turn_helix multiple antibiotic resistance protein APT_02256 SM00903 Flavin reductase like domain APT_02257 SM01007 Class II Aldolase and Adducin N-terminal domain APT_02260 SM00822 APT_02260 APT_02267 SM00564 beta-propeller repeat APT_02274 SM00382 ATPases associated with a variety of cellular activities APT_02278 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. APT_02280 SM00671 Sel1-like repeats. APT_02305 SM00855 Phosphoglycerate mutase family APT_02308 SM00833 Cobalamin synthesis protein cobW C-terminal domain APT_02311 SM00347 helix_turn_helix multiple antibiotic resistance protein APT_02315 SM00903 Flavin reductase like domain APT_02318 SM00382 ATPases associated with a variety of cellular activities APT_02340 SM00382 ATPases associated with a variety of cellular activities APT_02345 SM00248 ankyrin repeats APT_02346 SM00861 Transketolase, pyrimidine binding domain APT_02348 SM01350 APT_02348 APT_02357 SM00829 Enoylreductase APT_02360 SM00729 Elongator protein 3, MiaB family, Radical SAM APT_02363 SM00382 ATPases associated with a variety of cellular activities APT_02368 SM00387 Histidine kinase-like ATPases APT_02368 SM00388 His Kinase A (phosphoacceptor) domain APT_02368 SM00448 cheY-homologous receiver domain APT_02369 SM00421 helix_turn_helix, Lux Regulon APT_02369 SM00448 cheY-homologous receiver domain APT_02374 SM00988 UreE urease accessory protein, N-terminal domain APT_02388 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor APT_02390 SM00849 Metallo-beta-lactamase superfamily APT_02405 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain APT_02408 SM00347 helix_turn_helix multiple antibiotic resistance protein APT_02412 SM00849 Metallo-beta-lactamase superfamily APT_02428 SM00434 DNA Topoisomerase IV APT_02431 SM00316 Ribosomal protein S1-like RNA-binding domain APT_02431 SM00322 K homology RNA-binding domain APT_02432 SM01387 APT_02432 APT_02435 SM00382 ATPases associated with a variety of cellular activities APT_02441 SM00671 Sel1-like repeats. APT_02443 SM00382 ATPases associated with a variety of cellular activities APT_02445 SM01018 B12 binding domain APT_02460 SM00382 ATPases associated with a variety of cellular activities APT_02460 SM00962 SRP54-type protein, GTPase domain APT_02460 SM00963 SRP54-type protein, helical bundle domain APT_02461 SM00729 Elongator protein 3, MiaB family, Radical SAM APT_02465 SM00487 DEAD-like helicases superfamily APT_02465 SM00490 helicase superfamily c-terminal domain APT_02473 SM00382 ATPases associated with a variety of cellular activities APT_02479 SM00829 Enoylreductase APT_02481 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. APT_02495 SM01005 Alanine racemase, C-terminal domain APT_02496 SM00344 helix_turn_helix ASNC type APT_02500 SM00316 Ribosomal protein S1-like RNA-binding domain APT_02500 SM00322 K homology RNA-binding domain APT_02503 SM00382 ATPases associated with a variety of cellular activities APT_02506 SM00062 Bacterial periplasmic substrate-binding proteins APT_02506 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. APT_02507 SM00382 ATPases associated with a variety of cellular activities APT_02509 SM00382 ATPases associated with a variety of cellular activities APT_02517 SM00878 Biotin carboxylase C-terminal domain APT_02531 SM00732 Likely ribonuclease with RNase H fold. APT_02534 SM00845 GatB domain APT_02535 SM00382 ATPases associated with a variety of cellular activities APT_02536 SM00478 endonuclease III APT_02538 SM00478 endonuclease III APT_02549 SM00893 Electron transfer flavoprotein domain APT_02550 SM00893 Electron transfer flavoprotein domain APT_02553 SM00729 Elongator protein 3, MiaB family, Radical SAM APT_02555 SM00100 Cyclic nucleotide-monophosphate binding domain APT_02555 SM00419 helix_turn_helix, cAMP Regulatory protein APT_02556 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. APT_02560 SM00363 S4 RNA-binding domain APT_02567 SM00857 Resolvase, N terminal domain APT_02573 SM00855 Phosphoglycerate mutase family APT_02580 SM00382 ATPases associated with a variety of cellular activities APT_02580 SM00843 APT_02580 APT_02591 SM00840 APT_02591 APT_02598 SM00448 cheY-homologous receiver domain APT_02598 SM00862 Transcriptional regulatory protein, C terminal APT_02601 SM00382 ATPases associated with a variety of cellular activities APT_02610 SM00382 ATPases associated with a variety of cellular activities APT_02611 SM00278 Helix-hairpin-helix DNA-binding motif class 1 APT_02614 SM00957 SecA DEAD-like domain APT_02614 SM00958 SecA preprotein cross-linking domain APT_02622 SM00271 DnaJ molecular chaperone homology domain APT_02629 SM00411 bacterial (prokaryotic) histone like domain APT_02647 SM00470 ParB-like nuclease domain APT_02650 SM01228 APT_02650 APT_10004 SM00487 DEAD-like helicases superfamily APT_10005 SM00470 ParB-like nuclease domain APT_10006 SM00530 Helix-turn-helix XRE-family like proteins APT_10022 SM00966 SpoVT / AbrB like domain APT_10032 SM01040 BRO family, N-terminal domain APT_10033 SM00411 bacterial (prokaryotic) histone like domain APT_10034 SM00857 Resolvase, N terminal domain APT_10047 SM00857 Resolvase, N terminal domain APT_10055 SM00966 SpoVT / AbrB like domain APT_10074 SM00382 ATPases associated with a variety of cellular activities APT_10075 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain APT_10080 SM00833 Cobalamin synthesis protein cobW C-terminal domain APT_10093 SM00382 ATPases associated with a variety of cellular activities APT_10096 SM00857 Resolvase, N terminal domain APT_10101 SM00342 helix_turn_helix, arabinose operon control protein APT_10108 SM00829 Enoylreductase APT_10126 SM00342 helix_turn_helix, arabinose operon control protein APT_10127 SM00822 APT_10127 APT_10130 SM00849 Metallo-beta-lactamase superfamily APT_10149 SM00857 Resolvase, N terminal domain APT_10152 SM00477 DNA/RNA non-specific endonuclease APT_10152 SM00892 DNA/RNA non-specific endonuclease APT_10155 SM00966 SpoVT / AbrB like domain APT_10156 SM00344 helix_turn_helix ASNC type APT_10161 SM00822 APT_10161 APT_10168 SM00729 Elongator protein 3, MiaB family, Radical SAM APT_10171 SM00345 helix_turn_helix gluconate operon transcriptional repressor APT_10178 SM00822 APT_10178 APT_10179 SM00342 helix_turn_helix, arabinose operon control protein APT_10195 SM00481 DNA polymerase alpha chain like domain APT_20004 SM00857 Resolvase, N terminal domain