A4R89_00015	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
A4R89_00015	PWY-6853	ethylene biosynthesis II (microbes)
A4R89_00015	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
A4R89_00130	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
A4R89_00175	PWY-5963	thio-molybdenum cofactor biosynthesis
A4R89_00230	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
A4R89_00230	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
A4R89_00260	PWY-5386	methylglyoxal degradation I
A4R89_00275	PWY-5971	palmitate biosynthesis II (bacteria and plants)
A4R89_00275	PWY-5973	<i>cis</i>-vaccenate biosynthesis
A4R89_00275	PWY-5989	stearate biosynthesis II (bacteria and plants)
A4R89_00275	PWY-5994	palmitate biosynthesis I (animals and fungi)
A4R89_00275	PWY-6113	superpathway of mycolate biosynthesis
A4R89_00275	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
A4R89_00275	PWY-6519	8-amino-7-oxononanoate biosynthesis I
A4R89_00275	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
A4R89_00275	PWY-7663	gondoate biosynthesis (anaerobic)
A4R89_00275	PWY-7664	oleate biosynthesis IV (anaerobic)
A4R89_00275	PWY-7858	A4R89_00275
A4R89_00275	PWYG-321	mycolate biosynthesis
A4R89_00300	PWY-7560	methylerythritol phosphate pathway II
A4R89_00305	PWY-5667	CDP-diacylglycerol biosynthesis I
A4R89_00305	PWY-5981	CDP-diacylglycerol biosynthesis III
A4R89_00305	PWY-7817	A4R89_00305
A4R89_00340	PWY-6012	acyl carrier protein metabolism I
A4R89_00340	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
A4R89_00340	PWY-6289	petrobactin biosynthesis
A4R89_00355	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
A4R89_00355	PWY-6148	tetrahydromethanopterin biosynthesis
A4R89_00355	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
A4R89_00355	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
A4R89_00355	PWY-7852	A4R89_00355
A4R89_00355	PWY-7853	A4R89_00355
A4R89_00365	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
A4R89_00365	PWY-5743	3-hydroxypropanoate cycle
A4R89_00365	PWY-5744	glyoxylate assimilation
A4R89_00365	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
A4R89_00365	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
A4R89_00365	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
A4R89_00365	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
A4R89_00380	PWY-5344	L-homocysteine biosynthesis
A4R89_00440	PWY-381	nitrate reduction II (assimilatory)
A4R89_00440	PWY-5675	nitrate reduction V (assimilatory)
A4R89_00440	PWY-6549	L-glutamine biosynthesis III
A4R89_00440	PWY-6963	ammonia assimilation cycle I
A4R89_00440	PWY-6964	ammonia assimilation cycle II
A4R89_00465	PWY-5913	TCA cycle VI (obligate autotrophs)
A4R89_00465	PWY-6549	L-glutamine biosynthesis III
A4R89_00465	PWY-6728	methylaspartate cycle
A4R89_00465	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
A4R89_00465	PWY-7124	ethylene biosynthesis V (engineered)
A4R89_00465	PWY-7254	TCA cycle VII (acetate-producers)
A4R89_00465	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
A4R89_00470	PWY-101	photosynthesis light reactions
A4R89_00510	PWY-1042	glycolysis IV (plant cytosol)
A4R89_00510	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
A4R89_00510	PWY-5484	glycolysis II (from fructose 6-phosphate)
A4R89_00510	PWY-5723	Rubisco shunt
A4R89_00510	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
A4R89_00510	PWY-6886	1-butanol autotrophic biosynthesis
A4R89_00510	PWY-6901	superpathway of glucose and xylose degradation
A4R89_00510	PWY-7003	glycerol degradation to butanol
A4R89_00510	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
A4R89_00510	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
A4R89_00795	PWY-2201	folate transformations I
A4R89_00795	PWY-5497	purine nucleobases degradation II (anaerobic)
A4R89_00795	PWY-7909	A4R89_00795
A4R89_01315	PWY-6967	methylamine degradation I
A4R89_01330	PWY-6967	methylamine degradation I
A4R89_01390	PWY-5667	CDP-diacylglycerol biosynthesis I
A4R89_01390	PWY-5981	CDP-diacylglycerol biosynthesis III
A4R89_01390	PWY-7902	A4R89_01390
A4R89_01435	PWY-5913	TCA cycle VI (obligate autotrophs)
A4R89_01435	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
A4R89_01435	PWY-6638	sulfolactate degradation III
A4R89_01435	PWY-6642	(<i>R</i>)-cysteate degradation
A4R89_01435	PWY-6643	coenzyme M biosynthesis II
A4R89_01435	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
A4R89_01435	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
A4R89_01435	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
A4R89_01525	PWY-6902	chitin degradation II
A4R89_01525	PWY-7822	A4R89_01525
A4R89_01525	PWY-7883	A4R89_01525
A4R89_01645	PWY-7560	methylerythritol phosphate pathway II
A4R89_01680	PWY-6891	thiazole biosynthesis II (Bacillus)
A4R89_01680	PWY-6892	thiazole biosynthesis I (E. coli)
A4R89_01680	PWY-7560	methylerythritol phosphate pathway II
A4R89_01690	PWY-5129	sphingolipid biosynthesis (plants)
A4R89_01690	PWY-7836	A4R89_01690
A4R89_01690	PWY-7838	A4R89_01690
A4R89_01690	PWY-7839	A4R89_01690
A4R89_01690	PWY-7841	A4R89_01690
A4R89_01720	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
A4R89_01720	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
A4R89_01720	PWY-7953	A4R89_01720
A4R89_01755	PWY-5101	L-isoleucine biosynthesis II
A4R89_01755	PWY-5103	L-isoleucine biosynthesis III
A4R89_01755	PWY-5104	L-isoleucine biosynthesis IV
A4R89_01755	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
A4R89_01755	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
A4R89_01755	PWY-6389	(<i>S</i>)-acetoin biosynthesis
A4R89_01755	PWY-7111	pyruvate fermentation to isobutanol (engineered)
A4R89_01760	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
A4R89_01785	PWY-5381	pyridine nucleotide cycling (plants)
A4R89_01785	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
A4R89_01785	PWY-7761	A4R89_01785
A4R89_01790	PWY-3341	L-proline biosynthesis III
A4R89_01790	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
A4R89_01800	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
A4R89_01850	PWY-5108	L-isoleucine biosynthesis V
A4R89_01850	PWY-5132	humulone biosynthesis
A4R89_01850	PWY-5133	cohumulone biosynthesis
A4R89_01850	PWY-6672	<i>cis</i>-genanyl-CoA degradation
A4R89_01850	PWY-7118	chitin degradation to ethanol
A4R89_01850	PWY-7857	A4R89_01850
A4R89_01855	PWY-5747	2-methylcitrate cycle II
A4R89_02390	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
A4R89_02430	PWY-7980	A4R89_02430
A4R89_02495	PWY-6123	inosine-5'-phosphate biosynthesis I
A4R89_02495	PWY-6124	inosine-5'-phosphate biosynthesis II
A4R89_02495	PWY-7234	inosine-5'-phosphate biosynthesis III
A4R89_02505	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
A4R89_02505	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
A4R89_02510	PWY-2941	L-lysine biosynthesis II
A4R89_02510	PWY-2942	L-lysine biosynthesis III
A4R89_02510	PWY-5097	L-lysine biosynthesis VI
A4R89_02580	PWY-7799	A4R89_02580
A4R89_02580	PWY-7800	A4R89_02580
A4R89_02585	PWY-4041	&gamma;-glutamyl cycle
A4R89_02585	PWY-4061	glutathione-mediated detoxification I
A4R89_02585	PWY-5826	hypoglycin biosynthesis
A4R89_02585	PWY-6842	glutathione-mediated detoxification II
A4R89_02585	PWY-7112	4-hydroxy-2-nonenal detoxification
A4R89_02585	PWY-7559	glutathione degradation (DUG pathway - yeast)
A4R89_02615	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
A4R89_02615	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
A4R89_02615	PWY-6897	thiamin salvage II
A4R89_02615	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
A4R89_02615	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
A4R89_02615	PWY-7356	thiamin salvage IV (yeast)
A4R89_02615	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
A4R89_02665	PWY-5686	UMP biosynthesis
A4R89_02805	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
A4R89_02805	PWY-2201	folate transformations I
A4R89_02805	PWY-3841	folate transformations II
A4R89_02805	PWY-5030	L-histidine degradation III
A4R89_02805	PWY-5497	purine nucleobases degradation II (anaerobic)
A4R89_02805	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
A4R89_02805	PWY-7909	A4R89_02805
A4R89_02810	PWY-2201	folate transformations I
A4R89_02810	PWY-3841	folate transformations II
A4R89_02830	PWY-6700	queuosine biosynthesis
A4R89_02835	PWY-6700	queuosine biosynthesis
A4R89_02840	PWY-6700	queuosine biosynthesis
A4R89_02880	PWY-7805	A4R89_02880
A4R89_02880	PWY-7807	A4R89_02880
A4R89_02920	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
A4R89_02930	PWY-5152	leucodelphinidin biosynthesis
A4R89_02940	PWY-7072	hopanoid biosynthesis (bacteria)
A4R89_02950	PWY-7072	hopanoid biosynthesis (bacteria)
A4R89_02955	PWY-6098	diploterol and cycloartenol biosynthesis
A4R89_02955	PWY-7072	hopanoid biosynthesis (bacteria)
A4R89_03200	PWY-6700	queuosine biosynthesis
A4R89_03210	PWY-7980	A4R89_03210
A4R89_03220	PWY-7980	A4R89_03220
A4R89_03285	PWY-5686	UMP biosynthesis
A4R89_03285	PWY-7790	A4R89_03285
A4R89_03285	PWY-7791	A4R89_03285
A4R89_03305	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
A4R89_03305	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
A4R89_03305	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
A4R89_03350	PWY-3781	aerobic respiration I (cytochrome c)
A4R89_03350	PWY-4521	arsenite oxidation I (respiratory)
A4R89_03350	PWY-6692	Fe(II) oxidation
A4R89_03350	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
A4R89_03350	PWY-7544	pyruvate to cytochrome <i>bo</i> oxidase electron transfer
A4R89_03395	PWY-6605	adenine and adenosine salvage II
A4R89_03395	PWY-6610	adenine and adenosine salvage IV
A4R89_03395	PWY-7805	A4R89_03395
A4R89_03395	PWY-7807	A4R89_03395
A4R89_03420	PWY-6871	3-methylbutanol biosynthesis
A4R89_03440	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
A4R89_03440	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
A4R89_03445	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
A4R89_03445	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
A4R89_03445	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
A4R89_03445	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
A4R89_03480	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
A4R89_03480	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
A4R89_03480	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
A4R89_03480	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
A4R89_03510	PWY-7205	CMP phosphorylation
A4R89_03515	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
A4R89_03525	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
A4R89_03525	PWY-6148	tetrahydromethanopterin biosynthesis
A4R89_03525	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
A4R89_03525	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
A4R89_03585	PWY-6906	chitin derivatives degradation
A4R89_03585	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
A4R89_03585	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
A4R89_03625	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
A4R89_03625	PWY-7536	2-amino-3-hydroxycyclopent-2-enone biosynthesis
A4R89_03635	PWY-6891	thiazole biosynthesis II (Bacillus)
A4R89_03635	PWY-6892	thiazole biosynthesis I (E. coli)
A4R89_03635	PWY-7560	methylerythritol phosphate pathway II
A4R89_03640	PWY-1042	glycolysis IV (plant cytosol)
A4R89_03640	PWY-5484	glycolysis II (from fructose 6-phosphate)
A4R89_03640	PWY-6901	superpathway of glucose and xylose degradation
A4R89_03640	PWY-7003	glycerol degradation to butanol
A4R89_03645	PWY-1042	glycolysis IV (plant cytosol)
A4R89_03645	PWY-5484	glycolysis II (from fructose 6-phosphate)
A4R89_03645	PWY-6886	1-butanol autotrophic biosynthesis
A4R89_03645	PWY-6901	superpathway of glucose and xylose degradation
A4R89_03645	PWY-7003	glycerol degradation to butanol
A4R89_03680	PWY-3781	aerobic respiration I (cytochrome c)
A4R89_03680	PWY-4302	aerobic respiration III (alternative oxidase pathway)
A4R89_03680	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
A4R89_03680	PWY-5690	TCA cycle II (plants and fungi)
A4R89_03680	PWY-6728	methylaspartate cycle
A4R89_03680	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
A4R89_03680	PWY-7254	TCA cycle VII (acetate-producers)
A4R89_03680	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
A4R89_03685	PWY-3781	aerobic respiration I (cytochrome c)
A4R89_03685	PWY-4302	aerobic respiration III (alternative oxidase pathway)
A4R89_03685	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
A4R89_03685	PWY-5690	TCA cycle II (plants and fungi)
A4R89_03685	PWY-6728	methylaspartate cycle
A4R89_03685	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
A4R89_03685	PWY-7254	TCA cycle VII (acetate-producers)
A4R89_03685	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
A4R89_03700	PWY-2941	L-lysine biosynthesis II
A4R89_03700	PWY-2942	L-lysine biosynthesis III
A4R89_03700	PWY-5097	L-lysine biosynthesis VI
A4R89_03700	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
A4R89_03700	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
A4R89_03700	PWY-6559	spermidine biosynthesis II
A4R89_03700	PWY-6562	norspermidine biosynthesis
A4R89_03700	PWY-7153	grixazone biosynthesis
A4R89_03700	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
A4R89_03700	PWY-7977	A4R89_03700
A4R89_03760	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
A4R89_03760	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
A4R89_03760	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
A4R89_03795	PWY-6167	flavin biosynthesis II (archaea)
A4R89_03850	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
A4R89_03850	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
A4R89_03850	PWY-7766	A4R89_03850
A4R89_03985	PWY-5381	pyridine nucleotide cycling (plants)
A4R89_03985	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
A4R89_03985	PWY-7761	A4R89_03985
A4R89_04035	PWY-3341	L-proline biosynthesis III
A4R89_04035	PWY-4981	L-proline biosynthesis II (from arginine)
A4R89_04035	PWY-6344	L-ornithine degradation II (Stickland reaction)
A4R89_04075	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
A4R89_04155	PWY-6614	tetrahydrofolate biosynthesis
A4R89_04160	PWY-6749	CMP-legionaminate biosynthesis I
A4R89_04190	PWY-4381	fatty acid biosynthesis initiation I
A4R89_04190	PWY-5743	3-hydroxypropanoate cycle
A4R89_04190	PWY-5744	glyoxylate assimilation
A4R89_04190	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
A4R89_04190	PWY-6722	candicidin biosynthesis
A4R89_04195	PWY-2161	folate polyglutamylation
A4R89_04220	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
A4R89_04225	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
A4R89_04235	PWY-7887	A4R89_04235
A4R89_04235	PWY-7892	A4R89_04235
A4R89_04275	PWY-3221	dTDP-L-rhamnose biosynthesis II
A4R89_04275	PWY-6808	dTDP-D-forosamine biosynthesis
A4R89_04275	PWY-6942	dTDP-D-desosamine biosynthesis
A4R89_04275	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
A4R89_04275	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
A4R89_04275	PWY-6974	dTDP-L-olivose biosynthesis
A4R89_04275	PWY-6976	dTDP-L-mycarose biosynthesis
A4R89_04275	PWY-7104	dTDP-L-megosamine biosynthesis
A4R89_04275	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
A4R89_04275	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
A4R89_04275	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
A4R89_04275	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
A4R89_04275	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
A4R89_04275	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
A4R89_04275	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
A4R89_04275	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
A4R89_04275	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
A4R89_04275	PWY-7688	A4R89_04275
A4R89_04275	PWY-7814	A4R89_04275
A4R89_04280	PWY-3221	dTDP-L-rhamnose biosynthesis II
A4R89_04280	PWY-6808	dTDP-D-forosamine biosynthesis
A4R89_04280	PWY-6942	dTDP-D-desosamine biosynthesis
A4R89_04280	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
A4R89_04280	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
A4R89_04280	PWY-6974	dTDP-L-olivose biosynthesis
A4R89_04280	PWY-6976	dTDP-L-mycarose biosynthesis
A4R89_04280	PWY-7104	dTDP-L-megosamine biosynthesis
A4R89_04280	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
A4R89_04280	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
A4R89_04280	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
A4R89_04280	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
A4R89_04280	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
A4R89_04280	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
A4R89_04280	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
A4R89_04280	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
A4R89_04280	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
A4R89_04280	PWY-7688	A4R89_04280
A4R89_04280	PWY-7814	A4R89_04280
A4R89_04450	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
A4R89_04580	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
A4R89_04650	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
A4R89_04670	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
A4R89_04670	PWY-6416	quinate degradation II
A4R89_04670	PWY-6707	gallate biosynthesis
A4R89_04770	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
A4R89_04790	PWY-5392	reductive TCA cycle II
A4R89_04790	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
A4R89_04790	PWY-5690	TCA cycle II (plants and fungi)
A4R89_04790	PWY-5913	TCA cycle VI (obligate autotrophs)
A4R89_04790	PWY-6728	methylaspartate cycle
A4R89_04790	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
A4R89_04790	PWY-7254	TCA cycle VII (acetate-producers)
A4R89_04790	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
A4R89_04805	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
A4R89_04855	PWY-5101	L-isoleucine biosynthesis II
A4R89_04855	PWY-5103	L-isoleucine biosynthesis III
A4R89_04855	PWY-5104	L-isoleucine biosynthesis IV
A4R89_04855	PWY-7111	pyruvate fermentation to isobutanol (engineered)
A4R89_04940	PWY-2941	L-lysine biosynthesis II
A4R89_04940	PWY-5097	L-lysine biosynthesis VI
A4R89_05010	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
A4R89_05010	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
A4R89_05010	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
A4R89_05010	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
A4R89_05025	PWY-2201	folate transformations I
A4R89_05025	PWY-3841	folate transformations II
A4R89_05025	PWY-7977	A4R89_05025
A4R89_05115	PWY-7851	A4R89_05115
A4R89_05140	PWY-6834	spermidine biosynthesis III
A4R89_05290	PWY-4202	arsenate detoxification I (glutaredoxin)
A4R89_05290	PWY-4621	arsenate detoxification II (glutaredoxin)
A4R89_05385	PWY-5704	urea degradation II
A4R89_05390	PWY-5704	urea degradation II
A4R89_05395	PWY-5704	urea degradation II
A4R89_05560	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
A4R89_05590	PWY-5530	sorbitol biosynthesis II
A4R89_05595	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
A4R89_05595	PWY-5723	Rubisco shunt
A4R89_05600	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
A4R89_05600	PWY-6855	chitin degradation I (archaea)
A4R89_05600	PWY-6906	chitin derivatives degradation
A4R89_05615	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
A4R89_05615	PWY-3801	sucrose degradation II (sucrose synthase)
A4R89_05615	PWY-5054	sorbitol biosynthesis I
A4R89_05615	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
A4R89_05615	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
A4R89_05615	PWY-5659	GDP-mannose biosynthesis
A4R89_05615	PWY-5723	Rubisco shunt
A4R89_05615	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
A4R89_05615	PWY-621	sucrose degradation III (sucrose invertase)
A4R89_05615	PWY-622	starch biosynthesis
A4R89_05615	PWY-6981	chitin biosynthesis
A4R89_05615	PWY-6992	1,5-anhydrofructose degradation
A4R89_05615	PWY-7238	sucrose biosynthesis II
A4R89_05615	PWY-7347	sucrose biosynthesis III
A4R89_05615	PWY-7385	1,3-propanediol biosynthesis (engineered)
A4R89_05620	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
A4R89_05620	PWY-5723	Rubisco shunt
A4R89_05620	PWY-6891	thiazole biosynthesis II (Bacillus)
A4R89_05620	PWY-6892	thiazole biosynthesis I (E. coli)
A4R89_05620	PWY-6901	superpathway of glucose and xylose degradation
A4R89_05620	PWY-7560	methylerythritol phosphate pathway II
A4R89_05725	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
A4R89_05745	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
A4R89_05745	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
A4R89_05870	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
A4R89_05880	PWY-5443	aminopropanol phosphate biosynthesis I
A4R89_05885	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
A4R89_05885	PWY-6269	adenosylcobalamin salvage from cobinamide II
A4R89_05885	PWY-7961	A4R89_05885
A4R89_05885	PWY-7963	A4R89_05885
A4R89_05885	PWY-7964	A4R89_05885
A4R89_05885	PWY-7965	A4R89_05885
A4R89_05885	PWY-7966	A4R89_05885
A4R89_05885	PWY-7967	A4R89_05885
A4R89_05885	PWY-7968	A4R89_05885
A4R89_05885	PWY-7969	A4R89_05885
A4R89_05885	PWY-7970	A4R89_05885
A4R89_05885	PWY-7975	A4R89_05885
A4R89_05890	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
A4R89_05890	PWY-6269	adenosylcobalamin salvage from cobinamide II
A4R89_05890	PWY-7964	A4R89_05890
A4R89_05890	PWY-7965	A4R89_05890
A4R89_05890	PWY-7966	A4R89_05890
A4R89_05890	PWY-7967	A4R89_05890
A4R89_05890	PWY-7968	A4R89_05890
A4R89_05890	PWY-7969	A4R89_05890
A4R89_05890	PWY-7970	A4R89_05890
A4R89_05895	PWY-6269	adenosylcobalamin salvage from cobinamide II
A4R89_05895	PWY-7962	A4R89_05895
A4R89_05895	PWY-7971	A4R89_05895
A4R89_05895	PWY-7972	A4R89_05895
A4R89_06085	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
A4R89_06115	PWY-5194	siroheme biosynthesis
A4R89_06115	PWY-5196	factor 430 biosynthesis
A4R89_06115	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
A4R89_06180	PWY-7883	A4R89_06180
A4R89_06215	PWY-5686	UMP biosynthesis
A4R89_06215	PWY-7790	A4R89_06215
A4R89_06215	PWY-7791	A4R89_06215
A4R89_06350	PWY-5057	L-valine degradation II
A4R89_06350	PWY-5076	L-leucine degradation III
A4R89_06350	PWY-5078	L-isoleucine degradation II
A4R89_06350	PWY-5101	L-isoleucine biosynthesis II
A4R89_06350	PWY-5103	L-isoleucine biosynthesis III
A4R89_06350	PWY-5104	L-isoleucine biosynthesis IV
A4R89_06350	PWY-5108	L-isoleucine biosynthesis V
A4R89_06350	PWY-7767	A4R89_06350
A4R89_06380	PWY-7805	A4R89_06380
A4R89_06380	PWY-7807	A4R89_06380
A4R89_06385	PWY-5484	glycolysis II (from fructose 6-phosphate)
A4R89_06415	PWY-6823	molybdenum cofactor biosynthesis
A4R89_06425	PWY-6420	pyrroloquinoline quinone biosynthesis
A4R89_06500	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
A4R89_06685	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
A4R89_06795	PWY-6683	sulfate reduction III (assimilatory)
A4R89_06830	PWY-6748	nitrate reduction VII (denitrification)
A4R89_06835	PWY-6748	nitrate reduction VII (denitrification)
A4R89_06900	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
A4R89_06900	PWY-3162	L-tryptophan degradation V (side chain pathway)
A4R89_06900	PWY-5057	L-valine degradation II
A4R89_06900	PWY-5076	L-leucine degradation III
A4R89_06900	PWY-5078	L-isoleucine degradation II
A4R89_06900	PWY-5079	L-phenylalanine degradation III
A4R89_06900	PWY-5082	L-methionine degradation III
A4R89_06900	PWY-5480	pyruvate fermentation to ethanol I
A4R89_06900	PWY-5486	pyruvate fermentation to ethanol II
A4R89_06900	PWY-5751	phenylethanol biosynthesis
A4R89_06900	PWY-6313	serotonin degradation
A4R89_06900	PWY-6333	acetaldehyde biosynthesis I
A4R89_06900	PWY-6342	noradrenaline and adrenaline degradation
A4R89_06900	PWY-6587	pyruvate fermentation to ethanol III
A4R89_06900	PWY-6802	salidroside biosynthesis
A4R89_06900	PWY-6871	3-methylbutanol biosynthesis
A4R89_06900	PWY-7013	L-1,2-propanediol degradation
A4R89_06900	PWY-7111	pyruvate fermentation to isobutanol (engineered)
A4R89_06900	PWY-7118	chitin degradation to ethanol
A4R89_06900	PWY-7396	butanol and isobutanol biosynthesis (engineered)
A4R89_06900	PWY-7798	A4R89_06900
A4R89_06970	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
A4R89_06970	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
A4R89_06970	PWY-6936	seleno-amino acid biosynthesis
A4R89_06970	PWY-702	L-methionine biosynthesis II
A4R89_07025	PWY-5316	nicotine biosynthesis
A4R89_07025	PWY-7342	superpathway of nicotine biosynthesis
A4R89_07030	PWY-5316	nicotine biosynthesis
A4R89_07030	PWY-5381	pyridine nucleotide cycling (plants)
A4R89_07030	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
A4R89_07030	PWY-7342	superpathway of nicotine biosynthesis
A4R89_07050	PWY-5386	methylglyoxal degradation I
A4R89_07050	PWY-7425	2-chloroacrylate degradation I
A4R89_07160	PWY-7560	methylerythritol phosphate pathway II
A4R89_07165	PWY-702	L-methionine biosynthesis II
A4R89_07185	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
A4R89_07185	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
A4R89_07185	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
A4R89_07240	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
A4R89_07240	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
A4R89_07240	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
A4R89_07240	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
A4R89_07240	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
A4R89_07240	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
A4R89_07240	PWY-7205	CMP phosphorylation
A4R89_07240	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
A4R89_07240	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
A4R89_07240	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
A4R89_07240	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
A4R89_07240	PWY-7224	purine deoxyribonucleosides salvage
A4R89_07240	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
A4R89_07240	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
A4R89_07325	PWY-5958	acridone alkaloid biosynthesis
A4R89_07325	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
A4R89_07325	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
A4R89_07370	PWY-7802	A4R89_07370
A4R89_07375	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
A4R89_07375	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
A4R89_07385	PWY-1622	formaldehyde assimilation I (serine pathway)
A4R89_07385	PWY-181	photorespiration
A4R89_07385	PWY-2161	folate polyglutamylation
A4R89_07385	PWY-2201	folate transformations I
A4R89_07385	PWY-3661	glycine betaine degradation I
A4R89_07385	PWY-3661-1	glycine betaine degradation II (mammalian)
A4R89_07385	PWY-3841	folate transformations II
A4R89_07385	PWY-5497	purine nucleobases degradation II (anaerobic)
A4R89_07425	PWY-2781	<i>cis</i>-zeatin biosynthesis
A4R89_07430	PWY-5101	L-isoleucine biosynthesis II
A4R89_07430	PWY-5103	L-isoleucine biosynthesis III
A4R89_07430	PWY-5104	L-isoleucine biosynthesis IV
A4R89_07430	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
A4R89_07430	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
A4R89_07430	PWY-6389	(<i>S</i>)-acetoin biosynthesis
A4R89_07430	PWY-7111	pyruvate fermentation to isobutanol (engineered)
A4R89_07435	PWY-5101	L-isoleucine biosynthesis II
A4R89_07435	PWY-5103	L-isoleucine biosynthesis III
A4R89_07435	PWY-5104	L-isoleucine biosynthesis IV
A4R89_07435	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
A4R89_07435	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
A4R89_07435	PWY-6389	(<i>S</i>)-acetoin biosynthesis
A4R89_07435	PWY-7111	pyruvate fermentation to isobutanol (engineered)
A4R89_07440	PWY-5103	L-isoleucine biosynthesis III
A4R89_07440	PWY-7111	pyruvate fermentation to isobutanol (engineered)
A4R89_07475	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
A4R89_07485	PWY-5381	pyridine nucleotide cycling (plants)
A4R89_07490	PWY-6164	3-dehydroquinate biosynthesis I
A4R89_07530	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
A4R89_07530	PWY-6549	L-glutamine biosynthesis III
A4R89_07530	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
A4R89_07530	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
A4R89_07570	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
A4R89_07570	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
A4R89_07570	PWY-7953	A4R89_07570
A4R89_07575	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
A4R89_07575	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
A4R89_07575	PWY-7953	A4R89_07575
A4R89_07580	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
A4R89_07580	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
A4R89_07580	PWY-7953	A4R89_07580
A4R89_07585	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
A4R89_07585	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
A4R89_07585	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
A4R89_07585	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
A4R89_07590	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
A4R89_07590	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
A4R89_07590	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
A4R89_07590	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
A4R89_07595	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
A4R89_07595	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
A4R89_07600	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
A4R89_07600	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
A4R89_07600	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
A4R89_07605	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
A4R89_07605	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
A4R89_07605	PWY-7953	A4R89_07605
A4R89_07650	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
A4R89_07665	PWY-3341	L-proline biosynthesis III
A4R89_07665	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
A4R89_07875	PWY-3781	aerobic respiration I (cytochrome c)
A4R89_07875	PWY-6692	Fe(II) oxidation
A4R89_07875	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
A4R89_07875	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
A4R89_07890	PWY-7991	A4R89_07890
A4R89_07895	PWY-6167	flavin biosynthesis II (archaea)
A4R89_07895	PWY-6168	flavin biosynthesis III (fungi)
A4R89_07895	PWY-7980	A4R89_07895
A4R89_07900	PWY-6167	flavin biosynthesis II (archaea)
A4R89_07900	PWY-6168	flavin biosynthesis III (fungi)
A4R89_07900	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
A4R89_07900	PWY-7991	A4R89_07900
A4R89_07905	PWY-6167	flavin biosynthesis II (archaea)
A4R89_07905	PWY-6168	flavin biosynthesis III (fungi)
A4R89_07975	PWY-5663	tetrahydrobiopterin biosynthesis I
A4R89_07975	PWY-5664	tetrahydrobiopterin biosynthesis II
A4R89_07975	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
A4R89_07975	PWY-6703	preQ<sub>0</sub> biosynthesis
A4R89_07975	PWY-6983	tetrahydrobiopterin biosynthesis III
A4R89_07975	PWY-7442	drosopterin and aurodrosopterin biosynthesis
A4R89_07975	PWY-7852	A4R89_07975
A4R89_07990	PWY-5659	GDP-mannose biosynthesis
A4R89_07990	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
A4R89_08080	PWY-7426	mannosyl-glycoprotein <i>N</i>-acetylglucosaminyltransferases
A4R89_08120	PWY-2301	<i>myo</i>-inositol biosynthesis
A4R89_08120	PWY-4702	phytate degradation I
A4R89_08120	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
A4R89_08470	PWY-5659	GDP-mannose biosynthesis
A4R89_08470	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
A4R89_08475	PWY-6749	CMP-legionaminate biosynthesis I
A4R89_08490	PWY-6936	seleno-amino acid biosynthesis
A4R89_08490	PWY-7274	D-cycloserine biosynthesis
A4R89_08490	PWY-7870	A4R89_08490
A4R89_08500	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
A4R89_08500	PWY-7820	A4R89_08500
A4R89_08515	PWY-7183	pyrimidine nucleobases salvage I
A4R89_08550	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
A4R89_08550	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
A4R89_08550	PWY-7622	UDP-galactofuranose biosynthesis
A4R89_08575	PWY-7560	methylerythritol phosphate pathway II
A4R89_08625	PWY-6854	ethylene biosynthesis III (microbes)
A4R89_08705	PWY-6840	homoglutathione biosynthesis
A4R89_08705	PWY-7255	ergothioneine biosynthesis I (bacteria)
A4R89_08765	PWY-6829	tRNA methylation (yeast)
A4R89_08765	PWY-7285	methylwyosine biosynthesis
A4R89_08765	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
A4R89_08785	PWY-7396	butanol and isobutanol biosynthesis (engineered)
A4R89_08840	PWY-4381	fatty acid biosynthesis initiation I
A4R89_08925	PWY-3781	aerobic respiration I (cytochrome c)
A4R89_08925	PWY-4521	arsenite oxidation I (respiratory)
A4R89_08925	PWY-6692	Fe(II) oxidation
A4R89_08925	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
A4R89_09015	PWY-1622	formaldehyde assimilation I (serine pathway)
A4R89_09015	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
A4R89_09015	PWY-5913	TCA cycle VI (obligate autotrophs)
A4R89_09015	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
A4R89_09015	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
A4R89_09015	PWY-6549	L-glutamine biosynthesis III
A4R89_09015	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
A4R89_09015	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
A4R89_09015	PWY-7124	ethylene biosynthesis V (engineered)
A4R89_09045	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
A4R89_09080	PWY-6938	NADH repair
A4R89_09185	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
A4R89_09185	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
A4R89_09190	PWY-3961	phosphopantothenate biosynthesis II
A4R89_09230	PWY-6749	CMP-legionaminate biosynthesis I
A4R89_09235	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
A4R89_09240	PWY-181	photorespiration
A4R89_09585	PWY-6348	phosphate acquisition
A4R89_09620	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
A4R89_09620	PWY-6596	adenosine nucleotides degradation I
A4R89_09620	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
A4R89_09670	PWY-4983	L-citrulline-nitric oxide cycle
A4R89_09670	PWY-4984	urea cycle
A4R89_09670	PWY-5	canavanine biosynthesis
A4R89_09670	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
A4R89_09670	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
A4R89_09690	PWY-6891	thiazole biosynthesis II (Bacillus)
A4R89_09690	PWY-6892	thiazole biosynthesis I (E. coli)
A4R89_09690	PWY-7560	methylerythritol phosphate pathway II
A4R89_09765	PWY-6823	molybdenum cofactor biosynthesis
A4R89_09775	PWY-5964	guanylyl molybdenum cofactor biosynthesis
A4R89_09775	PWY-7639	bis(guanylyl molybdenum cofactor) biosynthesis
A4R89_09860	PWY-1281	sulfoacetaldehyde degradation I
A4R89_09860	PWY-5482	pyruvate fermentation to acetate II
A4R89_09860	PWY-5485	pyruvate fermentation to acetate IV
A4R89_09860	PWY-5497	purine nucleobases degradation II (anaerobic)
A4R89_09860	PWY-6637	sulfolactate degradation II
A4R89_09865	PWY-5482	pyruvate fermentation to acetate II
A4R89_09865	PWY-5485	pyruvate fermentation to acetate IV
A4R89_09865	PWY-5497	purine nucleobases degradation II (anaerobic)
A4R89_09955	PWY-5392	reductive TCA cycle II
A4R89_09955	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
A4R89_09955	PWY-5690	TCA cycle II (plants and fungi)
A4R89_09955	PWY-5913	TCA cycle VI (obligate autotrophs)
A4R89_09955	PWY-6728	methylaspartate cycle
A4R89_09955	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
A4R89_09955	PWY-7254	TCA cycle VII (acetate-producers)
A4R89_09955	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
A4R89_09965	PWY-6683	sulfate reduction III (assimilatory)
A4R89_09990	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
A4R89_10000	PWY-5194	siroheme biosynthesis
A4R89_10000	PWY-5196	factor 430 biosynthesis
A4R89_10000	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
A4R89_10005	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
A4R89_10250	PWY-2723	trehalose degradation V
A4R89_10250	PWY-3801	sucrose degradation II (sucrose synthase)
A4R89_10250	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
A4R89_10250	PWY-5661	GDP-glucose biosynthesis
A4R89_10250	PWY-5940	streptomycin biosynthesis
A4R89_10250	PWY-5941	glycogen degradation II (eukaryotic)
A4R89_10250	PWY-622	starch biosynthesis
A4R89_10250	PWY-6317	galactose degradation I (Leloir pathway)
A4R89_10250	PWY-6731	starch degradation III
A4R89_10250	PWY-6737	starch degradation V
A4R89_10250	PWY-6749	CMP-legionaminate biosynthesis I
A4R89_10250	PWY-6981	chitin biosynthesis
A4R89_10250	PWY-7238	sucrose biosynthesis II
A4R89_10250	PWY-7343	UDP-glucose biosynthesis
A4R89_10250	PWY-7900	A4R89_10250
A4R89_10250	PWY-7902	A4R89_10250
A4R89_10380	PWY-6610	adenine and adenosine salvage IV
A4R89_10505	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
A4R89_10505	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
A4R89_10625	PWY-6910	hydroxymethylpyrimidine salvage
A4R89_10625	PWY-7356	thiamin salvage IV (yeast)
A4R89_10625	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
A4R89_10735	PWY-6098	diploterol and cycloartenol biosynthesis
A4R89_10735	PWY-7072	hopanoid biosynthesis (bacteria)
A4R89_10820	PWY-5497	purine nucleobases degradation II (anaerobic)
A4R89_10820	PWY-6606	guanosine nucleotides degradation II
A4R89_10820	PWY-6608	guanosine nucleotides degradation III
A4R89_10820	PWY-7442	drosopterin and aurodrosopterin biosynthesis
A4R89_10840	PWY-5691	urate degradation to allantoin I
A4R89_10840	PWY-7394	urate degradation to allantoin II
A4R89_10840	PWY-7849	A4R89_10840
A4R89_10845	PWY-5691	urate degradation to allantoin I
A4R89_10845	PWY-7394	urate degradation to allantoin II
A4R89_10845	PWY-7849	A4R89_10845
A4R89_10855	PWY-5497	purine nucleobases degradation II (anaerobic)
A4R89_10855	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
A4R89_10855	PWY-6538	caffeine degradation III (bacteria, via demethylation)
A4R89_10855	PWY-6596	adenosine nucleotides degradation I
A4R89_10855	PWY-6606	guanosine nucleotides degradation II
A4R89_10855	PWY-6607	guanosine nucleotides degradation I
A4R89_10855	PWY-6608	guanosine nucleotides degradation III
A4R89_10855	PWY-6999	theophylline degradation
A4R89_10860	PWY-5497	purine nucleobases degradation II (anaerobic)
A4R89_10860	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
A4R89_10860	PWY-6538	caffeine degradation III (bacteria, via demethylation)
A4R89_10860	PWY-6596	adenosine nucleotides degradation I
A4R89_10860	PWY-6606	guanosine nucleotides degradation II
A4R89_10860	PWY-6607	guanosine nucleotides degradation I
A4R89_10860	PWY-6608	guanosine nucleotides degradation III
A4R89_10860	PWY-6999	theophylline degradation
A4R89_10870	PWY-5169	cyanurate degradation
A4R89_10870	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
A4R89_10885	PWY-6832	2-aminoethylphosphonate degradation II
A4R89_10950	PWY-6654	phosphopantothenate biosynthesis III
A4R89_10975	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
A4R89_10975	PWY-3162	L-tryptophan degradation V (side chain pathway)
A4R89_10975	PWY-5057	L-valine degradation II
A4R89_10975	PWY-5076	L-leucine degradation III
A4R89_10975	PWY-5078	L-isoleucine degradation II
A4R89_10975	PWY-5079	L-phenylalanine degradation III
A4R89_10975	PWY-5082	L-methionine degradation III
A4R89_10975	PWY-5480	pyruvate fermentation to ethanol I
A4R89_10975	PWY-5486	pyruvate fermentation to ethanol II
A4R89_10975	PWY-5751	phenylethanol biosynthesis
A4R89_10975	PWY-6313	serotonin degradation
A4R89_10975	PWY-6333	acetaldehyde biosynthesis I
A4R89_10975	PWY-6342	noradrenaline and adrenaline degradation
A4R89_10975	PWY-6587	pyruvate fermentation to ethanol III
A4R89_10975	PWY-6802	salidroside biosynthesis
A4R89_10975	PWY-6871	3-methylbutanol biosynthesis
A4R89_10975	PWY-7013	L-1,2-propanediol degradation
A4R89_10975	PWY-7111	pyruvate fermentation to isobutanol (engineered)
A4R89_10975	PWY-7118	chitin degradation to ethanol
A4R89_10975	PWY-7396	butanol and isobutanol biosynthesis (engineered)
A4R89_10975	PWY-7798	A4R89_10975
A4R89_11040	PWY-4261	glycerol degradation I
A4R89_11040	PWY-6118	glycerol-3-phosphate shuttle
A4R89_11040	PWY-6952	glycerophosphodiester degradation
A4R89_11050	PWY-4261	glycerol degradation I
A4R89_11070	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
A4R89_11070	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
A4R89_11070	PWY-6896	thiamin salvage I
A4R89_11070	PWY-6897	thiamin salvage II
A4R89_11180	PWY-7851	A4R89_11180
A4R89_11185	PWY-5839	menaquinol-7 biosynthesis
A4R89_11185	PWY-5844	menaquinol-9 biosynthesis
A4R89_11185	PWY-5849	menaquinol-6 biosynthesis
A4R89_11185	PWY-5890	menaquinol-10 biosynthesis
A4R89_11185	PWY-5891	menaquinol-11 biosynthesis
A4R89_11185	PWY-5892	menaquinol-12 biosynthesis
A4R89_11185	PWY-5895	menaquinol-13 biosynthesis
A4R89_11220	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
A4R89_11220	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
A4R89_11225	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
A4R89_11225	PWY-7177	UTP and CTP dephosphorylation II
A4R89_11225	PWY-7185	UTP and CTP dephosphorylation I
A4R89_11235	PWY-1042	glycolysis IV (plant cytosol)
A4R89_11235	PWY-5484	glycolysis II (from fructose 6-phosphate)
A4R89_11235	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
A4R89_11235	PWY-7003	glycerol degradation to butanol
A4R89_11245	PWY-5958	acridone alkaloid biosynthesis
A4R89_11245	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
A4R89_11245	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
A4R89_11250	PWY-5958	acridone alkaloid biosynthesis
A4R89_11250	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
A4R89_11250	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
A4R89_11265	PWY-6823	molybdenum cofactor biosynthesis
A4R89_11285	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
A4R89_11285	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
A4R89_11290	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
A4R89_11290	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
A4R89_11310	PWY-5269	cardiolipin biosynthesis II
A4R89_11310	PWY-5668	cardiolipin biosynthesis I
A4R89_11310	PWY-7817	A4R89_11310
A4R89_11325	PWY-6123	inosine-5'-phosphate biosynthesis I
A4R89_11325	PWY-6124	inosine-5'-phosphate biosynthesis II
A4R89_11325	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
A4R89_11325	PWY-7234	inosine-5'-phosphate biosynthesis III
A4R89_11330	PWY-6123	inosine-5'-phosphate biosynthesis I
A4R89_11330	PWY-6124	inosine-5'-phosphate biosynthesis II
A4R89_11330	PWY-7234	inosine-5'-phosphate biosynthesis III
A4R89_11335	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
A4R89_11335	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
A4R89_11335	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
A4R89_11345	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
A4R89_11345	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
A4R89_11345	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
A4R89_11350	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
A4R89_11350	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
A4R89_11350	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
A4R89_11435	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
A4R89_11440	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
A4R89_11445	PWY-2941	L-lysine biosynthesis II
A4R89_11445	PWY-2942	L-lysine biosynthesis III
A4R89_11445	PWY-5097	L-lysine biosynthesis VI
A4R89_11490	PWY-4381	fatty acid biosynthesis initiation I
A4R89_11490	PWY-6799	fatty acid biosynthesis (plant mitochondria)
A4R89_11490	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
A4R89_11495	PWY-5367	petroselinate biosynthesis
A4R89_11495	PWY-5971	palmitate biosynthesis II (bacteria and plants)
A4R89_11495	PWY-5973	<i>cis</i>-vaccenate biosynthesis
A4R89_11495	PWY-5989	stearate biosynthesis II (bacteria and plants)
A4R89_11495	PWY-5994	palmitate biosynthesis I (animals and fungi)
A4R89_11495	PWY-6113	superpathway of mycolate biosynthesis
A4R89_11495	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
A4R89_11495	PWY-6519	8-amino-7-oxononanoate biosynthesis I
A4R89_11495	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
A4R89_11495	PWY-7663	gondoate biosynthesis (anaerobic)
A4R89_11495	PWY-7664	oleate biosynthesis IV (anaerobic)
A4R89_11495	PWY-7858	A4R89_11495
A4R89_11495	PWYG-321	mycolate biosynthesis
A4R89_11535	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
A4R89_11545	PWY-6683	sulfate reduction III (assimilatory)
A4R89_11555	PWY-5278	sulfite oxidation III
A4R89_11555	PWY-5340	sulfate activation for sulfonation
A4R89_11555	PWY-6683	sulfate reduction III (assimilatory)
A4R89_11555	PWY-6932	selenate reduction
A4R89_11560	PWY-5278	sulfite oxidation III
A4R89_11560	PWY-5340	sulfate activation for sulfonation
A4R89_11560	PWY-6683	sulfate reduction III (assimilatory)
A4R89_11560	PWY-6932	selenate reduction
A4R89_11575	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
A4R89_11580	PWY-6703	preQ<sub>0</sub> biosynthesis
A4R89_11585	PWY-6703	preQ<sub>0</sub> biosynthesis
A4R89_11595	PWY-7254	TCA cycle VII (acetate-producers)
A4R89_11605	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
A4R89_11610	PWY-5971	palmitate biosynthesis II (bacteria and plants)
A4R89_11610	PWY-5973	<i>cis</i>-vaccenate biosynthesis
A4R89_11610	PWY-5989	stearate biosynthesis II (bacteria and plants)
A4R89_11610	PWY-6113	superpathway of mycolate biosynthesis
A4R89_11610	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
A4R89_11610	PWY-6519	8-amino-7-oxononanoate biosynthesis I
A4R89_11610	PWY-7663	gondoate biosynthesis (anaerobic)
A4R89_11610	PWY-7664	oleate biosynthesis IV (anaerobic)
A4R89_11610	PWY-7858	A4R89_11610
A4R89_11610	PWYG-321	mycolate biosynthesis
A4R89_11615	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
A4R89_11615	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
A4R89_11645	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
A4R89_11645	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
A4R89_11645	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
A4R89_11645	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
A4R89_11645	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
A4R89_11645	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
A4R89_11650	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
A4R89_11650	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
A4R89_11680	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
A4R89_11730	PWY-723	alkylnitronates degradation
A4R89_11735	PWY-2941	L-lysine biosynthesis II
A4R89_11735	PWY-2942	L-lysine biosynthesis III
A4R89_11735	PWY-5097	L-lysine biosynthesis VI
A4R89_11735	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
A4R89_11735	PWY-6559	spermidine biosynthesis II
A4R89_11735	PWY-6562	norspermidine biosynthesis
A4R89_11735	PWY-7153	grixazone biosynthesis
A4R89_11735	PWY-7977	A4R89_11735
A4R89_11740	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
A4R89_11740	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
A4R89_11740	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
A4R89_11740	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
A4R89_11740	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
A4R89_11740	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
A4R89_11740	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
A4R89_11740	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
A4R89_11740	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
A4R89_11740	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
A4R89_11775	PWY-6823	molybdenum cofactor biosynthesis
A4R89_11780	PWY-6749	CMP-legionaminate biosynthesis I
A4R89_11785	PWY-3801	sucrose degradation II (sucrose synthase)
A4R89_11785	PWY-6527	stachyose degradation
A4R89_11785	PWY-7238	sucrose biosynthesis II
A4R89_11785	PWY-7343	UDP-glucose biosynthesis
A4R89_11785	PWY-7817	A4R89_11785
A4R89_11795	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
A4R89_11795	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
A4R89_11815	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
A4R89_11820	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
A4R89_11855	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
A4R89_11855	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
A4R89_11855	PWY-6897	thiamin salvage II
A4R89_11855	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
A4R89_11855	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
A4R89_11855	PWY-7356	thiamin salvage IV (yeast)
A4R89_11855	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
A4R89_11860	PWY-6891	thiazole biosynthesis II (Bacillus)
A4R89_11860	PWY-6892	thiazole biosynthesis I (E. coli)
A4R89_11870	PWY-7396	butanol and isobutanol biosynthesis (engineered)
A4R89_11870	PWY-7806	A4R89_11870
A4R89_11880	PWY-1042	glycolysis IV (plant cytosol)
A4R89_11880	PWY-1622	formaldehyde assimilation I (serine pathway)
A4R89_11880	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
A4R89_11880	PWY-5484	glycolysis II (from fructose 6-phosphate)
A4R89_11880	PWY-5723	Rubisco shunt
A4R89_11880	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
A4R89_11880	PWY-6886	1-butanol autotrophic biosynthesis
A4R89_11880	PWY-6901	superpathway of glucose and xylose degradation
A4R89_11880	PWY-7003	glycerol degradation to butanol
A4R89_11880	PWY-7124	ethylene biosynthesis V (engineered)
A4R89_11880	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
A4R89_11895	PWY-6823	molybdenum cofactor biosynthesis
A4R89_11905	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
A4R89_11925	PWY-6823	molybdenum cofactor biosynthesis
A4R89_11925	PWY-7887	A4R89_11925
A4R89_11940	PWY-5269	cardiolipin biosynthesis II
A4R89_11940	PWY-5668	cardiolipin biosynthesis I
A4R89_11940	PWY-7817	A4R89_11940
A4R89_11950	PWY-7533	gliotoxin biosynthesis
A4R89_12020	PWY-3461	L-tyrosine biosynthesis II
A4R89_12020	PWY-3462	L-phenylalanine biosynthesis II
A4R89_12020	PWY-6120	L-tyrosine biosynthesis III
A4R89_12020	PWY-6627	salinosporamide A biosynthesis
A4R89_12020	PWY-7626	bacilysin biosynthesis
A4R89_12040	PWY-5686	UMP biosynthesis
A4R89_12040	PWY-7790	A4R89_12040
A4R89_12040	PWY-7791	A4R89_12040
A4R89_12045	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
A4R89_12045	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
A4R89_12060	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
A4R89_12060	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
A4R89_12060	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
A4R89_12060	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
A4R89_12060	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
A4R89_12060	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
A4R89_12060	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
A4R89_12060	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
A4R89_12065	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
A4R89_12065	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
A4R89_12065	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
A4R89_12065	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
A4R89_12065	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
A4R89_12065	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
A4R89_12065	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
A4R89_12065	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
A4R89_12120	PWY-6123	inosine-5'-phosphate biosynthesis I
A4R89_12120	PWY-7234	inosine-5'-phosphate biosynthesis III
A4R89_12220	PWY-6531	mannitol cycle
A4R89_12290	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
A4R89_12435	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
A4R89_12435	PWY-5686	UMP biosynthesis
A4R89_12435	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
A4R89_12435	PWY-7790	A4R89_12435
A4R89_12435	PWY-7791	A4R89_12435
A4R89_12440	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
A4R89_12440	PWY-5686	UMP biosynthesis
A4R89_12440	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
A4R89_12440	PWY-7790	A4R89_12440
A4R89_12440	PWY-7791	A4R89_12440
A4R89_12455	PWY-1042	glycolysis IV (plant cytosol)
A4R89_12455	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
A4R89_12455	PWY-5484	glycolysis II (from fructose 6-phosphate)
A4R89_12455	PWY-5723	Rubisco shunt
A4R89_12455	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
A4R89_12455	PWY-6886	1-butanol autotrophic biosynthesis
A4R89_12455	PWY-6901	superpathway of glucose and xylose degradation
A4R89_12455	PWY-7003	glycerol degradation to butanol
A4R89_12455	PWY-7124	ethylene biosynthesis V (engineered)
A4R89_12455	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
A4R89_12625	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
A4R89_12855	PWY-7801	A4R89_12855
A4R89_13010	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
A4R89_13010	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
A4R89_13010	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
A4R89_13015	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
A4R89_13015	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
A4R89_13025	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
A4R89_13025	PWY-5723	Rubisco shunt
A4R89_13050	PWY-7851	A4R89_13050
A4R89_13055	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
A4R89_13070	PWY-4983	L-citrulline-nitric oxide cycle
A4R89_13070	PWY-4984	urea cycle
A4R89_13070	PWY-5	canavanine biosynthesis
A4R89_13070	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
A4R89_13070	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
A4R89_13075	PWY-2941	L-lysine biosynthesis II
A4R89_13075	PWY-2942	L-lysine biosynthesis III
A4R89_13075	PWY-5097	L-lysine biosynthesis VI
A4R89_13085	PWY-3821	galactose degradation III
A4R89_13085	PWY-6317	galactose degradation I (Leloir pathway)
A4R89_13085	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
A4R89_13085	PWY-6527	stachyose degradation
A4R89_13085	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
A4R89_13085	PWY-7344	UDP-D-galactose biosynthesis
A4R89_13095	PWY-3162	L-tryptophan degradation V (side chain pathway)
A4R89_13095	PWY-5057	L-valine degradation II
A4R89_13095	PWY-5076	L-leucine degradation III
A4R89_13095	PWY-5078	L-isoleucine degradation II
A4R89_13095	PWY-5079	L-phenylalanine degradation III
A4R89_13095	PWY-5082	L-methionine degradation III
A4R89_13095	PWY-5480	pyruvate fermentation to ethanol I
A4R89_13095	PWY-5486	pyruvate fermentation to ethanol II
A4R89_13095	PWY-5751	phenylethanol biosynthesis
A4R89_13095	PWY-6313	serotonin degradation
A4R89_13095	PWY-6333	acetaldehyde biosynthesis I
A4R89_13095	PWY-6342	noradrenaline and adrenaline degradation
A4R89_13095	PWY-6587	pyruvate fermentation to ethanol III
A4R89_13095	PWY-6802	salidroside biosynthesis
A4R89_13095	PWY-6871	3-methylbutanol biosynthesis
A4R89_13095	PWY-7013	L-1,2-propanediol degradation
A4R89_13095	PWY-7111	pyruvate fermentation to isobutanol (engineered)
A4R89_13095	PWY-7118	chitin degradation to ethanol
A4R89_13095	PWY-7396	butanol and isobutanol biosynthesis (engineered)
A4R89_13115	PWY-6654	phosphopantothenate biosynthesis III
A4R89_13305	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
A4R89_13345	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
A4R89_13345	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
A4R89_13350	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
A4R89_13350	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
A4R89_13375	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
A4R89_13385	PWY-4381	fatty acid biosynthesis initiation I
A4R89_13385	PWY-5743	3-hydroxypropanoate cycle
A4R89_13385	PWY-5744	glyoxylate assimilation
A4R89_13385	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
A4R89_13385	PWY-6722	candicidin biosynthesis
A4R89_13400	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
A4R89_13400	PWY-6164	3-dehydroquinate biosynthesis I
A4R89_13425	PWY-5669	phosphatidylethanolamine biosynthesis I
A4R89_13470	PWY-5386	methylglyoxal degradation I
A4R89_13485	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
A4R89_13500	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
A4R89_13500	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
A4R89_13505	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
A4R89_13510	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
A4R89_13540	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
A4R89_13545	PWY-5686	UMP biosynthesis
A4R89_13545	PWY-7790	A4R89_13545
A4R89_13545	PWY-7791	A4R89_13545
A4R89_13590	PWY-6936	seleno-amino acid biosynthesis
A4R89_13635	PWY-7884	A4R89_13635
A4R89_13645	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
A4R89_13645	PWY-6167	flavin biosynthesis II (archaea)
A4R89_13645	PWY-6168	flavin biosynthesis III (fungi)
A4R89_13645	PWY-7863	A4R89_13645
A4R89_13655	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
A4R89_13655	PWY-5389	3-methylthiopropanoate biosynthesis
A4R89_13660	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
A4R89_13685	PWY-4981	L-proline biosynthesis II (from arginine)
A4R89_13685	PWY-4984	urea cycle
A4R89_13685	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
A4R89_13790	PWY-5108	L-isoleucine biosynthesis V
A4R89_13790	PWY-5132	humulone biosynthesis
A4R89_13790	PWY-5133	cohumulone biosynthesis
A4R89_13790	PWY-6672	<i>cis</i>-genanyl-CoA degradation
A4R89_13790	PWY-7118	chitin degradation to ethanol
A4R89_13790	PWY-7857	A4R89_13790
A4R89_13850	PWY-5958	acridone alkaloid biosynthesis
A4R89_13850	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
A4R89_13850	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
A4R89_14565	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
A4R89_14565	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
A4R89_14565	PWY-6936	seleno-amino acid biosynthesis
A4R89_14565	PWY-702	L-methionine biosynthesis II
A4R89_14690	PWY-4202	arsenate detoxification I (glutaredoxin)
A4R89_14690	PWY-4621	arsenate detoxification II (glutaredoxin)
A4R89_14755	PWY-6654	phosphopantothenate biosynthesis III
A4R89_15105	PWY-5958	acridone alkaloid biosynthesis
A4R89_15105	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
A4R89_15105	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
A4R89_15300	PWY-3781	aerobic respiration I (cytochrome c)
A4R89_15300	PWY-4521	arsenite oxidation I (respiratory)
A4R89_15300	PWY-6692	Fe(II) oxidation
A4R89_15300	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
A4R89_15545	PWY-5108	L-isoleucine biosynthesis V
A4R89_15545	PWY-5132	humulone biosynthesis
A4R89_15545	PWY-5133	cohumulone biosynthesis
A4R89_15545	PWY-6672	<i>cis</i>-genanyl-CoA degradation
A4R89_15545	PWY-7118	chitin degradation to ethanol
A4R89_15545	PWY-7857	A4R89_15545
