A0U91_00020	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
A0U91_00035	SM00530	Helix-turn-helix XRE-family like proteins 
A0U91_00195	SM01252	A0U91_00195
A0U91_00220	SM00421	helix_turn_helix, Lux Regulon
A0U91_00335	SM00382	ATPases associated with a variety of cellular activities
A0U91_00350	SM00890	Domain of unknown function
A0U91_00390	SM00346	helix_turn_helix isocitrate lyase regulation
A0U91_00410	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A0U91_00410	SM00895	A0U91_00410
A0U91_00440	SM01130	A0U91_00440
A0U91_00470	SM00479	A0U91_00470
A0U91_00475	SM00477	DNA/RNA non-specific endonuclease
A0U91_00475	SM00892	DNA/RNA non-specific endonuclease
A0U91_00550	SM00363	S4 RNA-binding domain
A0U91_00555	SM00861	Transketolase, pyrimidine binding domain
A0U91_00615	SM00869	Autotransporter beta-domain
A0U91_00620	SM00245	tail specific protease
A0U91_00630	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A0U91_00630	SM00895	A0U91_00630
A0U91_00705	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
A0U91_00810	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A0U91_00835	SM00387	Histidine kinase-like ATPases
A0U91_00835	SM00388	His Kinase A (phosphoacceptor) domain
A0U91_00840	SM00448	cheY-homologous receiver domain
A0U91_00840	SM00862	Transcriptional regulatory protein, C terminal
A0U91_00860	SM00470	ParB-like nuclease domain
A0U91_00995	SM00382	ATPases associated with a variety of cellular activities
A0U91_01055	SM00448	cheY-homologous receiver domain
A0U91_01055	SM00862	Transcriptional regulatory protein, C terminal
A0U91_01060	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A0U91_01060	SM00387	Histidine kinase-like ATPases
A0U91_01065	SM00729	Elongator protein 3, MiaB family, Radical SAM
A0U91_01095	SM00857	Resolvase, N terminal domain
A0U91_01145	SM00530	Helix-turn-helix XRE-family like proteins 
A0U91_01200	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
A0U91_01220	SM00833	Cobalamin synthesis protein cobW C-terminal domain
A0U91_01280	SM00347	helix_turn_helix multiple antibiotic resistance protein
A0U91_01290	SM00342	helix_turn_helix, arabinose operon control protein
A0U91_01295	SM00822	A0U91_01295
A0U91_01315	SM00530	Helix-turn-helix XRE-family like proteins 
A0U91_01355	SM00878	Biotin carboxylase C-terminal domain
A0U91_01375	SM00796	Allophanate hydrolase subunit 1
A0U91_01430	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A0U91_01430	SM00866	A0U91_01430
A0U91_01530	SM00382	ATPases associated with a variety of cellular activities
A0U91_01585	SM00382	ATPases associated with a variety of cellular activities
A0U91_01595	SM00448	cheY-homologous receiver domain
A0U91_01615	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A0U91_01630	SM00729	Elongator protein 3, MiaB family, Radical SAM
A0U91_01690	SM00822	A0U91_01690
A0U91_01735	SM00382	ATPases associated with a variety of cellular activities
A0U91_01740	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
A0U91_01740	SM00448	cheY-homologous receiver domain
A0U91_01740	SM00911	HWE histidine kinase
A0U91_01770	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A0U91_01770	SM00347	helix_turn_helix multiple antibiotic resistance protein
A0U91_01770	SM00529	Helix-turn-helix diphteria tox regulatory element
A0U91_01775	SM00116	Domain in cystathionine beta-synthase and other proteins.
A0U91_01775	SM01240	A0U91_01775
A0U91_01795	SM00448	cheY-homologous receiver domain
A0U91_01795	SM00862	Transcriptional regulatory protein, C terminal
A0U91_01810	SM00382	ATPases associated with a variety of cellular activities
A0U91_01815	SM00448	cheY-homologous receiver domain
A0U91_01835	SM00387	Histidine kinase-like ATPases
A0U91_01840	SM00382	ATPases associated with a variety of cellular activities
A0U91_01845	SM00382	ATPases associated with a variety of cellular activities
A0U91_01855	SM00341	Helicase and RNase D C-terminal
A0U91_01855	SM00487	DEAD-like helicases superfamily
A0U91_01855	SM00490	helicase superfamily c-terminal domain
A0U91_01855	SM00956	A0U91_01855
A0U91_01930	SM00382	ATPases associated with a variety of cellular activities
A0U91_01955	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
A0U91_01955	SM01232	A0U91_01955
A0U91_01965	SM00382	ATPases associated with a variety of cellular activities
A0U91_01965	SM00760	Bacterial dnaA protein helix-turn-helix domain
A0U91_01970	SM00480	DNA polymerase III beta subunit
A0U91_01975	SM00382	ATPases associated with a variety of cellular activities
A0U91_02040	SM00861	Transketolase, pyrimidine binding domain
A0U91_02055	SM00729	Elongator protein 3, MiaB family, Radical SAM
A0U91_02090	SM00998	Adenylosuccinate lyase C-terminus
A0U91_02110	SM01211	A0U91_02110
A0U91_02140	SM00155	Phospholipase D. Active site motifs.
A0U91_02155	SM00530	Helix-turn-helix XRE-family like proteins 
A0U91_02160	SM00450	Rhodanese Homology Domain
A0U91_02170	SM00382	ATPases associated with a variety of cellular activities
A0U91_02200	SM01130	A0U91_02200
A0U91_02210	SM00357	Cold shock protein domain
A0U91_02240	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
A0U91_02245	SM00822	A0U91_02245
A0U91_02255	SM00825	Beta-ketoacyl synthase
A0U91_02305	SM00382	ATPases associated with a variety of cellular activities
A0U91_02345	SM00822	A0U91_02345
A0U91_02355	SM00729	Elongator protein 3, MiaB family, Radical SAM
A0U91_02355	SM00876	Biotin and Thiamin Synthesis associated domain
A0U91_02430	SM00936	Penicillin-binding protein 5, C-terminal domain 
A0U91_02490	SM00937	A0U91_02490
A0U91_02505	SM00530	Helix-turn-helix XRE-family like proteins 
A0U91_02590	SM00271	DnaJ molecular chaperone homology domain
A0U91_02600	SM00327	von Willebrand factor (vWF) type A domain
A0U91_02635	SM00244	prohibitin homologues
A0U91_02645	SM00487	DEAD-like helicases superfamily
A0U91_02645	SM00490	helicase superfamily c-terminal domain
A0U91_02645	SM00982	A0U91_02645
A0U91_02645	SM01058	CarD-like/TRCF domain
A0U91_02655	SM00487	DEAD-like helicases superfamily
A0U91_02655	SM00490	helicase superfamily c-terminal domain
A0U91_02755	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A0U91_02755	SM00465	GIY-YIG type nucleases (URI domain)
A0U91_02780	SM00563	Phosphate acyltransferases
A0U91_02785	SM00729	Elongator protein 3, MiaB family, Radical SAM
A0U91_02800	SM01091	Transporter associated domain
A0U91_02830	SM00830	Chorismate mutase type II
A0U91_02835	SM00855	Phosphoglycerate mutase family
A0U91_02930	SM01001	AIR carboxylase
A0U91_02965	SM01329	A0U91_02965
A0U91_02985	SM00363	S4 RNA-binding domain
A0U91_02985	SM01390	A0U91_02985
A0U91_03035	SM00873	B3/4 domain
A0U91_03035	SM00874	tRNA synthetase B5 domain
A0U91_03035	SM00896	Ferredoxin-fold anticodon binding domain
A0U91_03070	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
A0U91_03085	SM00382	ATPases associated with a variety of cellular activities
A0U91_03085	SM01086	C-terminal, D2-small domain, of ClpB protein
A0U91_03095	SM00387	Histidine kinase-like ATPases
A0U91_03095	SM00388	His Kinase A (phosphoacceptor) domain
A0U91_03095	SM00448	cheY-homologous receiver domain
A0U91_03100	SM00387	Histidine kinase-like ATPases
A0U91_03115	SM00382	ATPases associated with a variety of cellular activities
A0U91_03145	SM01058	CarD-like/TRCF domain
A0U91_03150	SM00028	Tetratricopeptide repeats
A0U91_03195	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A0U91_03195	SM00895	A0U91_03195
A0U91_03200	SM00382	ATPases associated with a variety of cellular activities
A0U91_03285	SM00400	zinc finger
A0U91_03285	SM00493	A0U91_03285
A0U91_03290	SM00530	Helix-turn-helix XRE-family like proteins 
A0U91_03335	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A0U91_03335	SM00245	tail specific protease
A0U91_03360	SM00382	ATPases associated with a variety of cellular activities
A0U91_03375	SM00382	ATPases associated with a variety of cellular activities
A0U91_03455	SM00382	ATPases associated with a variety of cellular activities
A0U91_03480	SM00662	RNA polymerases D
A0U91_03545	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
A0U91_03550	SM01374	A0U91_03550
A0U91_03570	SM00322	K homology RNA-binding domain
A0U91_03585	SM01382	A0U91_03585
A0U91_03585	SM01383	A0U91_03585
A0U91_03605	SM01403	A0U91_03605
A0U91_03625	SM00663	RNA polymerase I subunit A N-terminus
A0U91_03650	SM00649	Ribosomal protein L11/L12
A0U91_03670	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A0U91_03670	SM00387	Histidine kinase-like ATPases
A0U91_03670	SM00388	His Kinase A (phosphoacceptor) domain
A0U91_03675	SM00448	cheY-homologous receiver domain
A0U91_03675	SM00862	Transcriptional regulatory protein, C terminal
A0U91_03890	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
A0U91_03950	SM00479	A0U91_03950
A0U91_04000	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A0U91_04050	SM00463	Small MutS-related domain
A0U91_04055	SM01235	A0U91_04055
A0U91_04065	SM00978	A0U91_04065
A0U91_04115	SM00852	Probable molybdopterin binding domain
A0U91_04155	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
A0U91_04230	SM00563	Phosphate acyltransferases
A0U91_04235	SM00996	S-adenosyl-L-homocysteine hydrolase
A0U91_04235	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
A0U91_04265	SM00861	Transketolase, pyrimidine binding domain
A0U91_04300	SM01207	A0U91_04300
A0U91_04315	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
A0U91_04315	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
A0U91_04315	SM00493	A0U91_04315
A0U91_04320	SM00955	A0U91_04320
A0U91_04365	SM00387	Histidine kinase-like ATPases
A0U91_04365	SM00433	TopoisomeraseII
A0U91_04405	SM00904	Riboflavin kinase
A0U91_04420	SM01007	Class II Aldolase and Adducin N-terminal domain
A0U91_04475	SM00487	DEAD-like helicases superfamily
A0U91_04475	SM00490	helicase superfamily c-terminal domain
A0U91_04475	SM00847	Helicase associated domain (HA2)  Add an annotation
A0U91_04480	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A0U91_04610	SM00754	A domain in the BMP inhibitor chordin and in microbial proteins.
A0U91_04630	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A0U91_04630	SM00895	A0U91_04630
A0U91_04675	SM00984	UDP binding domain
A0U91_04750	SM00967	RNA 2'-O ribose methyltransferase substrate binding
A0U91_04770	SM00474	3'-5' exonuclease
A0U91_04775	SM00116	Domain in cystathionine beta-synthase and other proteins.
A0U91_04790	SM00382	ATPases associated with a variety of cellular activities
A0U91_04915	SM00935	Outer membrane protein (OmpH-like)
A0U91_04925	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A0U91_04960	SM00358	Double-stranded RNA binding motif
A0U91_04960	SM00535	Ribonuclease III family
A0U91_04975	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A0U91_04975	SM00954	Region found in RelA / SpoT proteins
A0U91_04980	SM01409	A0U91_04980
A0U91_04995	SM00947	Carbonic anhydrase
A0U91_05005	SM00487	DEAD-like helicases superfamily
A0U91_05005	SM00490	helicase superfamily c-terminal domain
A0U91_05025	SM00838	Elongation factor G C-terminus
A0U91_05055	SM00564	beta-propeller repeat
A0U91_05080	SM01230	A0U91_05080
A0U91_05085	SM00938	Nitrogen regulatory protein P-II
A0U91_05120	SM01329	A0U91_05120
A0U91_05190	SM01005	Alanine racemase, C-terminal domain
A0U91_05205	SM00342	helix_turn_helix, arabinose operon control protein
A0U91_05255	SM00899	A0U91_05255
A0U91_05405	SM00382	ATPases associated with a variety of cellular activities
A0U91_05445	SM00833	Cobalamin synthesis protein cobW C-terminal domain
A0U91_05450	SM00320	WD40 repeats
A0U91_05475	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
A0U91_05485	SM00833	Cobalamin synthesis protein cobW C-terminal domain
A0U91_05500	SM00861	Transketolase, pyrimidine binding domain
A0U91_05510	SM00729	Elongator protein 3, MiaB family, Radical SAM
A0U91_05565	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
A0U91_05635	SM00867	YceI-like domain 
A0U91_05640	SM00530	Helix-turn-helix XRE-family like proteins 
A0U91_05680	SM00965	Secretin and TonB N terminus short domain
A0U91_05695	SM00487	DEAD-like helicases superfamily
A0U91_05695	SM00490	helicase superfamily c-terminal domain
A0U91_05720	SM00822	A0U91_05720
A0U91_05735	SM00825	Beta-ketoacyl synthase
A0U91_05800	SM00530	Helix-turn-helix XRE-family like proteins 
A0U91_05825	SM01012	A0U91_05825
A0U91_05870	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
A0U91_05870	SM00474	3'-5' exonuclease
A0U91_05870	SM00475	5'-3' exonuclease
A0U91_05870	SM00482	DNA polymerase A domain
A0U91_05910	SM00382	ATPases associated with a variety of cellular activities
A0U91_05915	SM00563	Phosphate acyltransferases
A0U91_05935	SM00855	Phosphoglycerate mutase family
A0U91_05940	SM01400	A0U91_05940
A0U91_05950	SM00382	ATPases associated with a variety of cellular activities
A0U91_05990	SM00028	Tetratricopeptide repeats
A0U91_05995	SM00986	Uracil DNA glycosylase superfamily
A0U91_05995	SM00987	UreE urease accessory protein, C-terminal domain 
A0U91_06010	SM00460	Transglutaminase/protease-like homologues
A0U91_06025	SM01091	Transporter associated domain
A0U91_06040	SM00861	Transketolase, pyrimidine binding domain
A0U91_06055	SM00729	Elongator protein 3, MiaB family, Radical SAM
A0U91_06285	SM00845	GatB domain
A0U91_06300	SM00732	Likely ribonuclease with RNase H fold.
A0U91_06340	SM00387	Histidine kinase-like ATPases
A0U91_06350	SM00859	Semialdehyde dehydrogenase, NAD binding domain
A0U91_06355	SM00822	A0U91_06355
A0U91_06360	SM00829	Enoylreductase
A0U91_06365	SM01091	Transporter associated domain
A0U91_06405	SM00387	Histidine kinase-like ATPases
A0U91_06405	SM00388	His Kinase A (phosphoacceptor) domain
A0U91_06410	SM00448	cheY-homologous receiver domain
A0U91_06410	SM00862	Transcriptional regulatory protein, C terminal
A0U91_06420	SM00788	Adenylosuccinate synthetase
A0U91_06460	SM00357	Cold shock protein domain
A0U91_06460	SM00382	ATPases associated with a variety of cellular activities
A0U91_06460	SM00959	Rho termination factor, N-terminal domain
A0U91_06495	SM00530	Helix-turn-helix XRE-family like proteins 
A0U91_06525	SM00798	AICARFT/IMPCHase bienzyme
A0U91_06525	SM00851	MGS-like domain
A0U91_06545	SM00271	DnaJ molecular chaperone homology domain
A0U91_06560	SM00448	cheY-homologous receiver domain
A0U91_06560	SM00862	Transcriptional regulatory protein, C terminal
A0U91_06610	SM00382	ATPases associated with a variety of cellular activities
A0U91_06610	SM01086	C-terminal, D2-small domain, of ClpB protein
A0U91_06665	SM01133	A0U91_06665
A0U91_06760	SM00487	DEAD-like helicases superfamily
A0U91_06760	SM00490	helicase superfamily c-terminal domain
A0U91_06870	SM00271	DnaJ molecular chaperone homology domain
A0U91_06890	SM00382	ATPases associated with a variety of cellular activities
A0U91_06910	SM00867	YceI-like domain 
A0U91_06935	SM00028	Tetratricopeptide repeats
A0U91_07020	SM00347	helix_turn_helix multiple antibiotic resistance protein
A0U91_07080	SM00507	HNH nucleases
A0U91_07115	SM00671	Sel1-like repeats.
A0U91_07220	SM00382	ATPases associated with a variety of cellular activities
A0U91_07325	SM00382	ATPases associated with a variety of cellular activities
A0U91_07325	SM00962	SRP54-type protein, GTPase domain
A0U91_07325	SM00963	SRP54-type protein, helical bundle domain
A0U91_07330	SM00729	Elongator protein 3, MiaB family, Radical SAM
A0U91_07390	SM00382	ATPases associated with a variety of cellular activities
A0U91_07430	SM00829	Enoylreductase
A0U91_07440	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A0U91_07500	SM01005	Alanine racemase, C-terminal domain
A0U91_07505	SM00344	helix_turn_helix ASNC type
A0U91_07525	SM00316	Ribosomal protein S1-like RNA-binding domain
A0U91_07525	SM00322	K homology RNA-binding domain
A0U91_07555	SM00062	Bacterial periplasmic substrate-binding proteins
A0U91_07555	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
A0U91_07560	SM00382	ATPases associated with a variety of cellular activities
A0U91_07570	SM00382	ATPases associated with a variety of cellular activities
A0U91_07585	SM00450	Rhodanese Homology Domain
A0U91_07620	SM00878	Biotin carboxylase C-terminal domain
A0U91_07650	SM00382	ATPases associated with a variety of cellular activities
A0U91_07655	SM00478	endonuclease III
A0U91_07940	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A0U91_07950	SM00849	Metallo-beta-lactamase superfamily
A0U91_07960	SM00382	ATPases associated with a variety of cellular activities
A0U91_07965	SM00382	ATPases associated with a variety of cellular activities
A0U91_07995	SM00344	helix_turn_helix ASNC type
A0U91_08005	SM00829	Enoylreductase
A0U91_08010	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A0U91_08035	SM00341	Helicase and RNase D C-terminal
A0U91_08035	SM00474	3'-5' exonuclease
A0U91_08050	SM00382	ATPases associated with a variety of cellular activities
A0U91_08085	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
A0U91_08085	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
A0U91_08095	SM00919	Malic enzyme, NAD binding domain
A0U91_08095	SM01274	A0U91_08095
A0U91_08120	SM00490	helicase superfamily c-terminal domain
A0U91_08170	SM00347	helix_turn_helix multiple antibiotic resistance protein
A0U91_08220	SM00564	beta-propeller repeat
A0U91_08245	SM00271	DnaJ molecular chaperone homology domain
A0U91_08280	SM00411	bacterial (prokaryotic) histone like domain
A0U91_08370	SM00470	ParB-like nuclease domain
A0U91_08480	SM00464	Found in ATP-dependent protease La (LON)
A0U91_08520	SM00382	ATPases associated with a variety of cellular activities
A0U91_08525	SM00932	Scaffold protein Nfu/NifU N terminal
A0U91_08545	SM01209	A0U91_08545
A0U91_08545	SM01210	A0U91_08545
A0U91_08570	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
A0U91_08590	SM00859	Semialdehyde dehydrogenase, NAD binding domain
A0U91_08640	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
A0U91_08645	SM00861	Transketolase, pyrimidine binding domain
A0U91_08670	SM00382	ATPases associated with a variety of cellular activities
A0U91_08715	SM00382	ATPases associated with a variety of cellular activities
A0U91_08725	SM00493	A0U91_08725
A0U91_08735	SM00905	Dihydroneopterin aldolase
A0U91_08755	SM00316	Ribosomal protein S1-like RNA-binding domain
A0U91_08790	SM00937	A0U91_08790
A0U91_08875	SM00917	LeuA allosteric (dimerisation) domain
A0U91_08945	SM00957	SecA DEAD-like domain
A0U91_08945	SM00958	SecA preprotein cross-linking domain
A0U91_08960	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A0U91_09080	SM00840	A0U91_09080
A0U91_09135	SM00382	ATPases associated with a variety of cellular activities
A0U91_09135	SM00843	A0U91_09135
A0U91_09170	SM00855	Phosphoglycerate mutase family
A0U91_09225	SM00363	S4 RNA-binding domain
A0U91_09240	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A0U91_09260	SM00100	Cyclic nucleotide-monophosphate binding domain
A0U91_09260	SM00419	helix_turn_helix, cAMP Regulatory protein
A0U91_09270	SM00729	Elongator protein 3, MiaB family, Radical SAM
A0U91_09285	SM00893	Electron transfer flavoprotein domain
A0U91_09290	SM00893	Electron transfer flavoprotein domain
A0U91_09335	SM00346	helix_turn_helix isocitrate lyase regulation
A0U91_09345	SM00829	Enoylreductase
A0U91_09490	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
A0U91_09525	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A0U91_09525	SM00387	Histidine kinase-like ATPases
A0U91_09530	SM00448	cheY-homologous receiver domain
A0U91_09530	SM00862	Transcriptional regulatory protein, C terminal
A0U91_09615	SM01018	B12 binding domain
A0U91_09625	SM00382	ATPases associated with a variety of cellular activities
A0U91_09635	SM00671	Sel1-like repeats.
A0U91_09665	SM00382	ATPases associated with a variety of cellular activities
A0U91_09680	SM01387	A0U91_09680
A0U91_09685	SM00316	Ribosomal protein S1-like RNA-binding domain
A0U91_09685	SM00322	K homology RNA-binding domain
A0U91_09700	SM00434	DNA Topoisomerase IV
A0U91_09805	SM00849	Metallo-beta-lactamase superfamily
A0U91_09970	SM00883	Chaperonin 10 Kd subunit
A0U91_10040	SM00487	DEAD-like helicases superfamily
A0U91_10040	SM00490	helicase superfamily c-terminal domain
A0U91_10045	SM00487	DEAD-like helicases superfamily
A0U91_10045	SM00490	helicase superfamily c-terminal domain
A0U91_10070	SM00746	metallochaperone-like domain
A0U91_10125	SM00382	ATPases associated with a variety of cellular activities
A0U91_10140	SM00490	helicase superfamily c-terminal domain
A0U91_10200	SM00729	Elongator protein 3, MiaB family, Radical SAM
A0U91_10215	SM00829	Enoylreductase
A0U91_10235	SM00886	Stress responsive A/B Barrel Domain
A0U91_10275	SM01350	A0U91_10275
A0U91_10285	SM00861	Transketolase, pyrimidine binding domain
A0U91_10295	SM00248	ankyrin repeats
A0U91_10335	SM00382	ATPases associated with a variety of cellular activities
A0U91_10500	SM00382	ATPases associated with a variety of cellular activities
A0U91_10555	SM00347	helix_turn_helix multiple antibiotic resistance protein
A0U91_10590	SM00833	Cobalamin synthesis protein cobW C-terminal domain
A0U91_10655	SM00829	Enoylreductase
A0U91_10900	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
A0U91_10930	SM00754	A domain in the BMP inhibitor chordin and in microbial proteins.
A0U91_10945	SM00245	tail specific protease
A0U91_10955	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A0U91_10960	SM00487	DEAD-like helicases superfamily
A0U91_10960	SM00490	helicase superfamily c-terminal domain
A0U91_11010	SM00530	Helix-turn-helix XRE-family like proteins 
A0U91_11080	SM00450	Rhodanese Homology Domain
A0U91_11205	SM01060	A0U91_11205
A0U91_11400	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A0U91_11415	SM00822	A0U91_11415
A0U91_11435	SM00357	Cold shock protein domain
A0U91_11445	SM00344	helix_turn_helix ASNC type
A0U91_11540	SM00564	beta-propeller repeat
A0U91_11670	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A0U91_11675	SM00836	DALR anticodon binding domain
A0U91_11675	SM01016	Arginyl tRNA synthetase N terminal dom
A0U91_11715	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A0U91_11715	SM00387	Histidine kinase-like ATPases
A0U91_11715	SM00388	His Kinase A (phosphoacceptor) domain
A0U91_11720	SM00448	cheY-homologous receiver domain
A0U91_11720	SM00862	Transcriptional regulatory protein, C terminal
A0U91_11760	SM00823	Phosphopantetheine attachment site
A0U91_11760	SM00824	Thioesterase
A0U91_11785	SM00342	helix_turn_helix, arabinose operon control protein
A0U91_11815	SM00382	ATPases associated with a variety of cellular activities
A0U91_11900	SM00729	Elongator protein 3, MiaB family, Radical SAM
A0U91_11970	SM00316	Ribosomal protein S1-like RNA-binding domain
A0U91_11985	SM00316	Ribosomal protein S1-like RNA-binding domain
A0U91_11990	SM00646	A0U91_11990
A0U91_12130	SM00028	Tetratricopeptide repeats
A0U91_12140	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
A0U91_12160	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A0U91_12160	SM00387	Histidine kinase-like ATPases
A0U91_12160	SM00388	His Kinase A (phosphoacceptor) domain
A0U91_12165	SM00448	cheY-homologous receiver domain
A0U91_12165	SM00862	Transcriptional regulatory protein, C terminal
A0U91_12180	SM00382	ATPases associated with a variety of cellular activities
A0U91_12185	SM00562	A0U91_12185
A0U91_12190	SM00729	Elongator protein 3, MiaB family, Radical SAM
A0U91_12210	SM00507	HNH nucleases
A0U91_12230	SM00530	Helix-turn-helix XRE-family like proteins 
A0U91_12245	SM00857	Resolvase, N terminal domain
A0U91_12315	SM00481	DNA polymerase alpha chain like domain
A0U91_12355	SM00434	DNA Topoisomerase IV
A0U91_12370	SM01004	Delta-aminolevulinic acid dehydratase
A0U91_12530	SM00864	Tubulin/FtsZ family, GTPase domain
A0U91_12530	SM00865	Tubulin/FtsZ family, C-terminal domain
A0U91_12640	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
A0U91_12685	SM00342	helix_turn_helix, arabinose operon control protein
A0U91_12810	SM00852	Probable molybdopterin binding domain
A0U91_12865	SM01323	A0U91_12865
A0U91_12875	SM00487	DEAD-like helicases superfamily
A0U91_12955	SM00938	Nitrogen regulatory protein P-II
A0U91_12965	SM00971	Serine acetyltransferase, N-terminal
A0U91_12985	SM00883	Chaperonin 10 Kd subunit
A0U91_13000	SM00491	A0U91_13000
A0U91_13010	SM00841	Elongation factor P, C-terminal
A0U91_13010	SM01185	A0U91_13010
A0U91_13145	SM00091	PAS domain
A0U91_13145	SM00387	Histidine kinase-like ATPases
A0U91_13145	SM00388	His Kinase A (phosphoacceptor) domain
A0U91_13150	SM00382	ATPases associated with a variety of cellular activities
A0U91_13150	SM00448	cheY-homologous receiver domain
A0U91_13155	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A0U91_13155	SM00387	Histidine kinase-like ATPases
A0U91_13155	SM00388	His Kinase A (phosphoacceptor) domain
A0U91_13160	SM00382	ATPases associated with a variety of cellular activities
A0U91_13160	SM00448	cheY-homologous receiver domain
A0U91_13190	SM00382	ATPases associated with a variety of cellular activities
A0U91_13190	SM01086	C-terminal, D2-small domain, of ClpB protein
A0U91_13315	SM00382	ATPases associated with a variety of cellular activities
A0U91_13320	SM00363	S4 RNA-binding domain
A0U91_13340	SM00382	ATPases associated with a variety of cellular activities
A0U91_13340	SM00962	SRP54-type protein, GTPase domain
A0U91_13340	SM00963	SRP54-type protein, helical bundle domain
A0U91_13375	SM01329	A0U91_13375
A0U91_13400	SM00347	helix_turn_helix multiple antibiotic resistance protein
A0U91_13405	SM00448	cheY-homologous receiver domain
A0U91_13405	SM00862	Transcriptional regulatory protein, C terminal
A0U91_13410	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A0U91_13410	SM00387	Histidine kinase-like ATPases
A0U91_13410	SM00388	His Kinase A (phosphoacceptor) domain
A0U91_13440	SM00411	bacterial (prokaryotic) histone like domain
A0U91_13465	SM00986	Uracil DNA glycosylase superfamily
A0U91_13465	SM00987	UreE urease accessory protein, C-terminal domain 
A0U91_13470	SM00411	bacterial (prokaryotic) histone like domain
A0U91_13495	SM00344	helix_turn_helix ASNC type
A0U91_13570	SM00028	Tetratricopeptide repeats
A0U91_13575	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
A0U91_13575	SM00534	ATPase domain of DNA mismatch repair MUTS family
A0U91_13580	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A0U91_13590	SM00382	ATPases associated with a variety of cellular activities
A0U91_13605	SM00838	Elongation factor G C-terminus
A0U91_13605	SM00889	Elongation factor G, domain IV
A0U91_13655	SM00382	ATPases associated with a variety of cellular activities
A0U91_13690	SM00487	DEAD-like helicases superfamily
A0U91_13690	SM00490	helicase superfamily c-terminal domain
A0U91_13720	SM00382	ATPases associated with a variety of cellular activities
A0U91_13720	SM00994	ClpX C4-type zinc finger
A0U91_13720	SM01086	C-terminal, D2-small domain, of ClpB protein
A0U91_13725	SM00382	ATPases associated with a variety of cellular activities
A0U91_13725	SM00464	Found in ATP-dependent protease La (LON)
A0U91_13730	SM00411	bacterial (prokaryotic) histone like domain
A0U91_13765	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
A0U91_13770	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
A0U91_13815	SM00849	Metallo-beta-lactamase superfamily
A0U91_13830	SM00382	ATPases associated with a variety of cellular activities
A0U91_13840	SM00346	helix_turn_helix isocitrate lyase regulation
A0U91_14000	SM00530	Helix-turn-helix XRE-family like proteins 
A0U91_14040	SM00382	ATPases associated with a variety of cellular activities
A0U91_14140	SM00342	helix_turn_helix, arabinose operon control protein
A0U91_14180	SM00829	Enoylreductase
A0U91_14290	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A0U91_14290	SM00245	tail specific protease
A0U91_14380	SM00382	ATPases associated with a variety of cellular activities
A0U91_14445	SM00382	ATPases associated with a variety of cellular activities
A0U91_14490	SM00271	DnaJ molecular chaperone homology domain
A0U91_14675	SM00869	Autotransporter beta-domain
A0U91_14725	SM00788	Adenylosuccinate synthetase
A0U91_14940	SM00507	HNH nucleases
A0U91_14970	SM00411	bacterial (prokaryotic) histone like domain
A0U91_15015	SM00382	ATPases associated with a variety of cellular activities
A0U91_15055	SM00028	Tetratricopeptide repeats
A0U91_15065	SM00962	SRP54-type protein, GTPase domain
A0U91_15115	SM00858	A0U91_15115
A0U91_15215	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A0U91_15250	SM00479	A0U91_15250
A0U91_15290	SM00072	Guanylate kinase homologues.
A0U91_15385	SM00479	A0U91_15385
A0U91_15415	SM00382	ATPases associated with a variety of cellular activities
A0U91_15470	SM00382	ATPases associated with a variety of cellular activities
A0U91_15530	SM00477	DNA/RNA non-specific endonuclease
A0U91_15530	SM00892	DNA/RNA non-specific endonuclease
A0U91_15580	SM00493	A0U91_15580
A0U91_15605	SM00862	Transcriptional regulatory protein, C terminal
A0U91_15690	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
A0U91_15690	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
A0U91_15925	SM01101	A0U91_15925
A0U91_16005	SM00244	prohibitin homologues
A0U91_16270	SM00532	Ligase N family
A0U91_16395	SM00382	ATPases associated with a variety of cellular activities
A0U91_16545	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A0U91_16545	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A0U91_16555	SM00448	cheY-homologous receiver domain
A0U91_16565	SM00260	Two component signalling adaptor domain
A0U91_16570	SM00138	Methyltransferase, chemotaxis proteins 
A0U91_16575	SM00448	cheY-homologous receiver domain
A0U91_16580	SM00448	cheY-homologous receiver domain
A0U91_16620	SM00869	Autotransporter beta-domain
A0U91_16625	SM00382	ATPases associated with a variety of cellular activities
A0U91_16640	SM00028	Tetratricopeptide repeats
A0U91_16775	SM00434	DNA Topoisomerase IV
A0U91_16780	SM00387	Histidine kinase-like ATPases
A0U91_16780	SM00433	TopoisomeraseII
A0U91_16805	SM00955	A0U91_16805
A0U91_16935	SM00857	Resolvase, N terminal domain
A0U91_17040	SM00530	Helix-turn-helix XRE-family like proteins 
A0U91_17130	SM00530	Helix-turn-helix XRE-family like proteins 
