CPF11_00045 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CPF11_00050 SM00382 ATPases associated with a variety of cellular activities CPF11_00055 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CPF11_00080 SM00833 Cobalamin synthesis protein cobW C-terminal domain CPF11_00145 SM00342 helix_turn_helix, arabinose operon control protein CPF11_00245 SM00965 Secretin and TonB N terminus short domain CPF11_00315 SM00345 helix_turn_helix gluconate operon transcriptional repressor CPF11_00360 SM00470 ParB-like nuclease domain CPF11_00365 SM00530 Helix-turn-helix XRE-family like proteins CPF11_00380 SM00382 ATPases associated with a variety of cellular activities CPF11_00630 SM00529 Helix-turn-helix diphteria tox regulatory element CPF11_00650 SM00382 ATPases associated with a variety of cellular activities CPF11_00705 SM00796 Allophanate hydrolase subunit 1 CPF11_00705 SM00797 Allophanate hydrolase subunit 2 CPF11_00705 SM00878 Biotin carboxylase C-terminal domain CPF11_00725 SM00382 ATPases associated with a variety of cellular activities CPF11_00815 SM00382 ATPases associated with a variety of cellular activities CPF11_00850 SM01068 Putative carbohydrate binding domain CPF11_00865 SM01060 CPF11_00865 CPF11_00910 SM00382 ATPases associated with a variety of cellular activities CPF11_00985 SM01092 CO dehydrogenase flavoprotein C-terminal domain CPF11_00990 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CPF11_01045 SM00382 ATPases associated with a variety of cellular activities CPF11_01085 SM00829 Enoylreductase CPF11_01095 SM00382 ATPases associated with a variety of cellular activities CPF11_01100 SM00448 cheY-homologous receiver domain CPF11_01120 SM00387 Histidine kinase-like ATPases CPF11_01125 SM00382 ATPases associated with a variety of cellular activities CPF11_01130 SM00382 ATPases associated with a variety of cellular activities CPF11_01140 SM00341 Helicase and RNase D C-terminal CPF11_01140 SM00487 DEAD-like helicases superfamily CPF11_01140 SM00490 helicase superfamily c-terminal domain CPF11_01140 SM00956 CPF11_01140 CPF11_01145 SM00420 helix_turn_helix, Deoxyribose operon repressor CPF11_01145 SM01134 CPF11_01145 CPF11_01190 SM00822 CPF11_01190 CPF11_01240 SM00382 ATPases associated with a variety of cellular activities CPF11_01265 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain CPF11_01265 SM01232 CPF11_01265 CPF11_01275 SM00382 ATPases associated with a variety of cellular activities CPF11_01275 SM00760 Bacterial dnaA protein helix-turn-helix domain CPF11_01280 SM00480 DNA polymerase III beta subunit CPF11_01290 SM00387 Histidine kinase-like ATPases CPF11_01290 SM00433 TopoisomeraseII CPF11_01350 SM00861 Transketolase, pyrimidine binding domain CPF11_01365 SM00729 Elongator protein 3, MiaB family, Radical SAM CPF11_01400 SM00998 Adenylosuccinate lyase C-terminus CPF11_01420 SM01211 CPF11_01420 CPF11_01450 SM00155 Phospholipase D. Active site motifs. CPF11_01465 SM00450 Rhodanese Homology Domain CPF11_01475 SM00382 ATPases associated with a variety of cellular activities CPF11_01505 SM01130 CPF11_01505 CPF11_01515 SM00357 Cold shock protein domain CPF11_01545 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CPF11_01550 SM00822 CPF11_01550 CPF11_01560 SM00825 Beta-ketoacyl synthase CPF11_01630 SM00729 Elongator protein 3, MiaB family, Radical SAM CPF11_01630 SM00876 Biotin and Thiamin Synthesis associated domain CPF11_01680 SM00849 Metallo-beta-lactamase superfamily CPF11_01705 SM00936 Penicillin-binding protein 5, C-terminal domain CPF11_01770 SM00937 CPF11_01770 CPF11_01785 SM00530 Helix-turn-helix XRE-family like proteins CPF11_01835 SM00729 Elongator protein 3, MiaB family, Radical SAM CPF11_01870 SM00271 DnaJ molecular chaperone homology domain CPF11_01880 SM00327 von Willebrand factor (vWF) type A domain CPF11_01900 SM00487 DEAD-like helicases superfamily CPF11_01900 SM00490 helicase superfamily c-terminal domain CPF11_01900 SM00982 CPF11_01900 CPF11_01900 SM01058 CarD-like/TRCF domain CPF11_01910 SM00487 DEAD-like helicases superfamily CPF11_01910 SM00490 helicase superfamily c-terminal domain CPF11_01940 SM01192 CPF11_01940 CPF11_01940 SM01193 CPF11_01940 CPF11_01955 SM00852 Probable molybdopterin binding domain CPF11_02005 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CPF11_02005 SM00465 GIY-YIG type nucleases (URI domain) CPF11_02030 SM00563 Phosphate acyltransferases CPF11_02035 SM00729 Elongator protein 3, MiaB family, Radical SAM CPF11_02050 SM00116 Domain in cystathionine beta-synthase and other proteins. CPF11_02050 SM01091 Transporter associated domain CPF11_02080 SM00830 Chorismate mutase type II CPF11_02085 SM00855 Phosphoglycerate mutase family CPF11_02180 SM01001 AIR carboxylase CPF11_02215 SM01329 CPF11_02215 CPF11_02230 SM00363 S4 RNA-binding domain CPF11_02230 SM01390 CPF11_02230 CPF11_02240 SM00100 Cyclic nucleotide-monophosphate binding domain CPF11_02265 SM00873 B3/4 domain CPF11_02265 SM00874 tRNA synthetase B5 domain CPF11_02265 SM00896 Ferredoxin-fold anticodon binding domain CPF11_02300 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CPF11_02310 SM00382 ATPases associated with a variety of cellular activities CPF11_02310 SM01086 C-terminal, D2-small domain, of ClpB protein CPF11_02320 SM00091 PAS domain CPF11_02320 SM00387 Histidine kinase-like ATPases CPF11_02320 SM00388 His Kinase A (phosphoacceptor) domain CPF11_02320 SM00448 cheY-homologous receiver domain CPF11_02325 SM00387 Histidine kinase-like ATPases CPF11_02325 SM00388 His Kinase A (phosphoacceptor) domain CPF11_02340 SM00382 ATPases associated with a variety of cellular activities CPF11_02365 SM01058 CarD-like/TRCF domain CPF11_02370 SM00028 Tetratricopeptide repeats CPF11_02410 SM00345 helix_turn_helix gluconate operon transcriptional repressor CPF11_02410 SM00895 CPF11_02410 CPF11_02415 SM00382 ATPases associated with a variety of cellular activities CPF11_02445 SM00650 Ribosomal RNA adenine dimethylases CPF11_02480 SM00400 zinc finger CPF11_02480 SM00493 CPF11_02480 CPF11_02490 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain CPF11_02495 SM00851 MGS-like domain CPF11_02495 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CPF11_02525 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CPF11_02525 SM00245 tail specific protease CPF11_02550 SM00382 ATPases associated with a variety of cellular activities CPF11_02565 SM00382 ATPases associated with a variety of cellular activities CPF11_02640 SM00382 ATPases associated with a variety of cellular activities CPF11_02660 SM00662 RNA polymerases D CPF11_02725 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CPF11_02730 SM01374 CPF11_02730 CPF11_02750 SM00322 K homology RNA-binding domain CPF11_02765 SM01382 CPF11_02765 CPF11_02765 SM01383 CPF11_02765 CPF11_02785 SM01403 CPF11_02785 CPF11_02805 SM00663 RNA polymerase I subunit A N-terminus CPF11_02835 SM00649 Ribosomal protein L11/L12 CPF11_02855 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CPF11_02855 SM00387 Histidine kinase-like ATPases CPF11_02855 SM00388 His Kinase A (phosphoacceptor) domain CPF11_02860 SM00448 cheY-homologous receiver domain CPF11_02860 SM00862 Transcriptional regulatory protein, C terminal CPF11_03025 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain CPF11_03080 SM00479 CPF11_03080 CPF11_03135 SM00829 Enoylreductase CPF11_03140 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CPF11_03185 SM00717 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains CPF11_03325 SM00487 DEAD-like helicases superfamily CPF11_03380 SM00342 helix_turn_helix, arabinose operon control protein CPF11_03465 SM00463 Small MutS-related domain CPF11_03470 SM01235 CPF11_03470 CPF11_03480 SM00978 CPF11_03480 CPF11_03485 SM00855 Phosphoglycerate mutase family CPF11_03530 SM00852 Probable molybdopterin binding domain CPF11_03565 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CPF11_03615 SM00849 Metallo-beta-lactamase superfamily CPF11_03625 SM00563 Phosphate acyltransferases CPF11_03630 SM00996 S-adenosyl-L-homocysteine hydrolase CPF11_03630 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CPF11_03655 SM00861 Transketolase, pyrimidine binding domain CPF11_03690 SM01207 CPF11_03690 CPF11_03700 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CPF11_03700 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CPF11_03700 SM00493 CPF11_03700 CPF11_03705 SM00955 CPF11_03705 CPF11_03710 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CPF11_03710 SM00245 tail specific protease CPF11_03745 SM00387 Histidine kinase-like ATPases CPF11_03745 SM00433 TopoisomeraseII CPF11_03760 SM00853 MutL C terminal dimerisation domain CPF11_03760 SM01340 CPF11_03760 CPF11_03780 SM00904 Riboflavin kinase CPF11_03795 SM01007 Class II Aldolase and Adducin N-terminal domain CPF11_03840 SM00487 DEAD-like helicases superfamily CPF11_03840 SM00490 helicase superfamily c-terminal domain CPF11_03840 SM00847 Helicase associated domain (HA2) Add an annotation CPF11_03845 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CPF11_03935 SM00345 helix_turn_helix gluconate operon transcriptional repressor CPF11_03935 SM00895 CPF11_03935 CPF11_03970 SM00382 ATPases associated with a variety of cellular activities CPF11_03985 SM00382 ATPases associated with a variety of cellular activities CPF11_04010 SM00072 Guanylate kinase homologues. CPF11_04025 SM00967 RNA 2'-O ribose methyltransferase substrate binding CPF11_04030 SM00474 3'-5' exonuclease CPF11_04035 SM00116 Domain in cystathionine beta-synthase and other proteins. CPF11_04050 SM00382 ATPases associated with a variety of cellular activities CPF11_04170 SM00935 Outer membrane protein (OmpH-like) CPF11_04180 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CPF11_04215 SM00358 Double-stranded RNA binding motif CPF11_04215 SM00535 Ribonuclease III family CPF11_04230 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CPF11_04230 SM00954 Region found in RelA / SpoT proteins CPF11_04235 SM01409 CPF11_04235 CPF11_04250 SM00947 Carbonic anhydrase CPF11_04260 SM00487 DEAD-like helicases superfamily CPF11_04260 SM00490 helicase superfamily c-terminal domain CPF11_04275 SM00838 Elongation factor G C-terminus CPF11_04290 SM00564 beta-propeller repeat CPF11_04300 SM01230 CPF11_04300 CPF11_04305 SM00938 Nitrogen regulatory protein P-II CPF11_04335 SM01329 CPF11_04335 CPF11_04460 SM00833 Cobalamin synthesis protein cobW C-terminal domain CPF11_04465 SM00320 WD40 repeats CPF11_04490 SM00861 Transketolase, pyrimidine binding domain CPF11_04575 SM00822 CPF11_04575 CPF11_04735 SM00450 Rhodanese Homology Domain CPF11_04765 SM00729 Elongator protein 3, MiaB family, Radical SAM CPF11_04775 SM00857 Resolvase, N terminal domain CPF11_04805 SM00530 Helix-turn-helix XRE-family like proteins CPF11_04880 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. CPF11_04930 SM00857 Resolvase, N terminal domain CPF11_04980 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CPF11_05120 SM00421 helix_turn_helix, Lux Regulon CPF11_05145 SM00382 ATPases associated with a variety of cellular activities CPF11_05175 SM00822 CPF11_05175 CPF11_05210 SM00855 Phosphoglycerate mutase family CPF11_05215 SM01400 CPF11_05215 CPF11_05225 SM00382 ATPases associated with a variety of cellular activities CPF11_05260 SM00028 Tetratricopeptide repeats CPF11_05265 SM00986 Uracil DNA glycosylase superfamily CPF11_05265 SM00987 UreE urease accessory protein, C-terminal domain CPF11_05275 SM01091 Transporter associated domain CPF11_05295 SM00861 Transketolase, pyrimidine binding domain CPF11_05310 SM00729 Elongator protein 3, MiaB family, Radical SAM CPF11_05385 SM00450 Rhodanese Homology Domain CPF11_05485 SM00530 Helix-turn-helix XRE-family like proteins CPF11_05500 SM00477 DNA/RNA non-specific endonuclease CPF11_05500 SM00892 DNA/RNA non-specific endonuclease CPF11_05585 SM00822 CPF11_05585 CPF11_05585 SM00823 Phosphopantetheine attachment site CPF11_05585 SM00826 CPF11_05585 CPF11_05585 SM00829 Enoylreductase CPF11_05595 SM00825 Beta-ketoacyl synthase CPF11_05595 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CPF11_05615 SM00966 SpoVT / AbrB like domain CPF11_05640 SM00487 DEAD-like helicases superfamily CPF11_05655 SM00387 Histidine kinase-like ATPases CPF11_05670 SM00859 Semialdehyde dehydrogenase, NAD binding domain CPF11_05675 SM00822 CPF11_05675 CPF11_05695 SM00382 ATPases associated with a variety of cellular activities CPF11_05700 SM00829 Enoylreductase CPF11_05705 SM01091 Transporter associated domain CPF11_05735 SM00387 Histidine kinase-like ATPases CPF11_05735 SM00388 His Kinase A (phosphoacceptor) domain CPF11_05740 SM00448 cheY-homologous receiver domain CPF11_05740 SM00862 Transcriptional regulatory protein, C terminal CPF11_05745 SM00788 Adenylosuccinate synthetase CPF11_05755 SM00382 ATPases associated with a variety of cellular activities CPF11_05805 SM00357 Cold shock protein domain CPF11_05805 SM00382 ATPases associated with a variety of cellular activities CPF11_05805 SM00959 Rho termination factor, N-terminal domain CPF11_05830 SM00530 Helix-turn-helix XRE-family like proteins CPF11_05865 SM00798 AICARFT/IMPCHase bienzyme CPF11_05865 SM00851 MGS-like domain CPF11_05890 SM00271 DnaJ molecular chaperone homology domain CPF11_05905 SM00448 cheY-homologous receiver domain CPF11_05905 SM00862 Transcriptional regulatory protein, C terminal CPF11_05910 SM00387 Histidine kinase-like ATPases CPF11_05910 SM00388 His Kinase A (phosphoacceptor) domain CPF11_05940 SM00382 ATPases associated with a variety of cellular activities CPF11_05940 SM01086 C-terminal, D2-small domain, of ClpB protein CPF11_05995 SM01133 CPF11_05995 CPF11_06095 SM00487 DEAD-like helicases superfamily CPF11_06095 SM00490 helicase superfamily c-terminal domain CPF11_06215 SM00271 DnaJ molecular chaperone homology domain CPF11_06235 SM00382 ATPases associated with a variety of cellular activities CPF11_06255 SM00867 YceI-like domain CPF11_06285 SM00028 Tetratricopeptide repeats CPF11_06355 SM00347 helix_turn_helix multiple antibiotic resistance protein CPF11_06435 SM00857 Resolvase, N terminal domain CPF11_06510 SM00857 Resolvase, N terminal domain CPF11_06550 SM00382 ATPases associated with a variety of cellular activities CPF11_06555 SM00382 ATPases associated with a variety of cellular activities CPF11_06575 SM00387 Histidine kinase-like ATPases CPF11_06575 SM00388 His Kinase A (phosphoacceptor) domain CPF11_06575 SM00448 cheY-homologous receiver domain CPF11_06580 SM00421 helix_turn_helix, Lux Regulon CPF11_06580 SM00448 cheY-homologous receiver domain CPF11_06625 SM00357 Cold shock protein domain CPF11_06665 SM00342 helix_turn_helix, arabinose operon control protein CPF11_06695 SM00382 ATPases associated with a variety of cellular activities CPF11_06720 SM00341 Helicase and RNase D C-terminal CPF11_06720 SM00474 3'-5' exonuclease CPF11_06735 SM00382 ATPases associated with a variety of cellular activities CPF11_06775 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CPF11_06775 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CPF11_06780 SM00919 Malic enzyme, NAD binding domain CPF11_06780 SM01274 CPF11_06780 CPF11_06800 SM00490 helicase superfamily c-terminal domain CPF11_06850 SM00347 helix_turn_helix multiple antibiotic resistance protein CPF11_06860 SM00490 helicase superfamily c-terminal domain CPF11_06905 SM00564 beta-propeller repeat CPF11_06915 SM00986 Uracil DNA glycosylase superfamily CPF11_06915 SM00987 UreE urease accessory protein, C-terminal domain CPF11_06935 SM00387 Histidine kinase-like ATPases CPF11_06935 SM00388 His Kinase A (phosphoacceptor) domain CPF11_06935 SM00448 cheY-homologous receiver domain CPF11_06955 SM00917 LeuA allosteric (dimerisation) domain CPF11_07045 SM00316 Ribosomal protein S1-like RNA-binding domain CPF11_07065 SM00905 Dihydroneopterin aldolase CPF11_07075 SM00493 CPF11_07075 CPF11_07085 SM00382 ATPases associated with a variety of cellular activities CPF11_07130 SM00382 ATPases associated with a variety of cellular activities CPF11_07155 SM00861 Transketolase, pyrimidine binding domain CPF11_07160 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CPF11_07200 SM00859 Semialdehyde dehydrogenase, NAD binding domain CPF11_07205 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CPF11_07205 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CPF11_07220 SM00829 Enoylreductase CPF11_07250 SM01209 CPF11_07250 CPF11_07250 SM01210 CPF11_07250 CPF11_07270 SM00932 Scaffold protein Nfu/NifU N terminal CPF11_07275 SM00382 ATPases associated with a variety of cellular activities CPF11_07300 SM00464 Found in ATP-dependent protease La (LON) CPF11_07400 SM01228 CPF11_07400 CPF11_07415 SM00470 ParB-like nuclease domain CPF11_07425 SM00857 Resolvase, N terminal domain CPF11_07445 SM01040 BRO family, N-terminal domain CPF11_07475 SM00530 Helix-turn-helix XRE-family like proteins CPF11_07580 SM00411 bacterial (prokaryotic) histone like domain CPF11_07615 SM00271 DnaJ molecular chaperone homology domain CPF11_07650 SM00957 SecA DEAD-like domain CPF11_07650 SM00958 SecA preprotein cross-linking domain CPF11_07665 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CPF11_07670 SM00382 ATPases associated with a variety of cellular activities CPF11_07715 SM00382 ATPases associated with a variety of cellular activities CPF11_07730 SM00448 cheY-homologous receiver domain CPF11_07730 SM00862 Transcriptional regulatory protein, C terminal CPF11_07770 SM00840 CPF11_07770 CPF11_07820 SM00382 ATPases associated with a variety of cellular activities CPF11_07820 SM00843 CPF11_07820 CPF11_07855 SM00855 Phosphoglycerate mutase family CPF11_07905 SM00363 S4 RNA-binding domain CPF11_07920 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CPF11_07925 SM00100 Cyclic nucleotide-monophosphate binding domain CPF11_07925 SM00419 helix_turn_helix, cAMP Regulatory protein CPF11_07935 SM00729 Elongator protein 3, MiaB family, Radical SAM CPF11_07950 SM00893 Electron transfer flavoprotein domain CPF11_07955 SM00893 Electron transfer flavoprotein domain CPF11_08035 SM00478 endonuclease III CPF11_08045 SM00478 endonuclease III CPF11_08050 SM00382 ATPases associated with a variety of cellular activities CPF11_08060 SM00845 GatB domain CPF11_08075 SM00732 Likely ribonuclease with RNase H fold. CPF11_08145 SM00878 Biotin carboxylase C-terminal domain CPF11_08185 SM00382 ATPases associated with a variety of cellular activities CPF11_08195 SM00382 ATPases associated with a variety of cellular activities CPF11_08200 SM00062 Bacterial periplasmic substrate-binding proteins CPF11_08200 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CPF11_08215 SM00382 ATPases associated with a variety of cellular activities CPF11_08230 SM00316 Ribosomal protein S1-like RNA-binding domain CPF11_08230 SM00322 K homology RNA-binding domain CPF11_08250 SM00344 helix_turn_helix ASNC type CPF11_08255 SM01005 Alanine racemase, C-terminal domain CPF11_08320 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CPF11_08330 SM00829 Enoylreductase CPF11_08355 SM00382 ATPases associated with a variety of cellular activities CPF11_08395 SM00487 DEAD-like helicases superfamily CPF11_08395 SM00490 helicase superfamily c-terminal domain CPF11_08415 SM00729 Elongator protein 3, MiaB family, Radical SAM CPF11_08420 SM00382 ATPases associated with a variety of cellular activities CPF11_08420 SM00962 SRP54-type protein, GTPase domain CPF11_08420 SM00963 SRP54-type protein, helical bundle domain CPF11_08495 SM01018 B12 binding domain CPF11_08505 SM00382 ATPases associated with a variety of cellular activities CPF11_08515 SM00671 Sel1-like repeats. CPF11_08545 SM00382 ATPases associated with a variety of cellular activities CPF11_08560 SM01387 CPF11_08560 CPF11_08565 SM00316 Ribosomal protein S1-like RNA-binding domain CPF11_08565 SM00322 K homology RNA-binding domain CPF11_08580 SM00434 DNA Topoisomerase IV CPF11_08660 SM00849 Metallo-beta-lactamase superfamily CPF11_08715 SM00965 Secretin and TonB N terminus short domain CPF11_08755 SM00347 helix_turn_helix multiple antibiotic resistance protein CPF11_08770 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CPF11_08845 SM00849 Metallo-beta-lactamase superfamily CPF11_08855 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CPF11_08925 SM00988 UreE urease accessory protein, N-terminal domain CPF11_08950 SM00421 helix_turn_helix, Lux Regulon CPF11_08950 SM00448 cheY-homologous receiver domain CPF11_08955 SM00387 Histidine kinase-like ATPases CPF11_08955 SM00388 His Kinase A (phosphoacceptor) domain CPF11_08955 SM00448 cheY-homologous receiver domain CPF11_08975 SM00382 ATPases associated with a variety of cellular activities CPF11_08980 SM00382 ATPases associated with a variety of cellular activities CPF11_09030 SM00729 Elongator protein 3, MiaB family, Radical SAM CPF11_09045 SM00829 Enoylreductase CPF11_09090 SM01350 CPF11_09090 CPF11_09100 SM00861 Transketolase, pyrimidine binding domain CPF11_09105 SM00248 ankyrin repeats CPF11_09130 SM00382 ATPases associated with a variety of cellular activities CPF11_09235 SM01040 BRO family, N-terminal domain CPF11_09255 SM00857 Resolvase, N terminal domain CPF11_09315 SM00382 ATPases associated with a variety of cellular activities CPF11_09325 SM00903 Flavin reductase like domain CPF11_09345 SM00347 helix_turn_helix multiple antibiotic resistance protein CPF11_09355 SM00833 Cobalamin synthesis protein cobW C-terminal domain CPF11_09370 SM00855 Phosphoglycerate mutase family CPF11_09485 SM00857 Resolvase, N terminal domain CPF11_09540 SM00966 SpoVT / AbrB like domain CPF11_09580 SM00487 DEAD-like helicases superfamily CPF11_09675 SM00482 DNA polymerase A domain CPF11_09710 SM00382 ATPases associated with a variety of cellular activities CPF11_09725 SM00530 Helix-turn-helix XRE-family like proteins CPF11_09795 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CPF11_09865 SM00563 Phosphate acyltransferases CPF11_09875 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CPF11_09875 SM00474 3'-5' exonuclease CPF11_09875 SM00475 5'-3' exonuclease CPF11_09875 SM00482 DNA polymerase A domain CPF11_09890 SM00382 ATPases associated with a variety of cellular activities CPF11_09900 SM00363 S4 RNA-binding domain CPF11_09945 SM00729 Elongator protein 3, MiaB family, Radical SAM CPF11_09995 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CPF11_10000 SM00836 DALR anticodon binding domain CPF11_10000 SM01016 Arginyl tRNA synthetase N terminal dom CPF11_10210 SM00460 Transglutaminase/protease-like homologues CPF11_10265 SM00316 Ribosomal protein S1-like RNA-binding domain CPF11_10280 SM00316 Ribosomal protein S1-like RNA-binding domain CPF11_10285 SM00646 CPF11_10285 CPF11_10365 SM00028 Tetratricopeptide repeats CPF11_10375 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CPF11_10390 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CPF11_10390 SM00387 Histidine kinase-like ATPases CPF11_10395 SM00448 cheY-homologous receiver domain CPF11_10395 SM00862 Transcriptional regulatory protein, C terminal CPF11_10405 SM00382 ATPases associated with a variety of cellular activities CPF11_10410 SM00562 CPF11_10410 CPF11_10415 SM00729 Elongator protein 3, MiaB family, Radical SAM CPF11_10435 SM00507 HNH nucleases CPF11_10475 SM00481 DNA polymerase alpha chain like domain CPF11_10520 SM00434 DNA Topoisomerase IV CPF11_10530 SM01004 Delta-aminolevulinic acid dehydratase CPF11_10560 SM00487 DEAD-like helicases superfamily CPF11_10560 SM00490 helicase superfamily c-terminal domain CPF11_10675 SM00292 breast cancer carboxy-terminal domain CPF11_10675 SM00532 Ligase N family CPF11_10695 SM00864 Tubulin/FtsZ family, GTPase domain CPF11_10695 SM00865 Tubulin/FtsZ family, C-terminal domain CPF11_10700 SM00842 Cell division protein FtsA CPF11_10805 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CPF11_10980 SM00966 SpoVT / AbrB like domain CPF11_11030 SM00857 Resolvase, N terminal domain CPF11_11195 SM00852 Probable molybdopterin binding domain CPF11_11240 SM01323 CPF11_11240 CPF11_11245 SM00487 DEAD-like helicases superfamily CPF11_11245 SM00490 helicase superfamily c-terminal domain CPF11_11335 SM00883 Chaperonin 10 Kd subunit CPF11_11345 SM00357 Cold shock protein domain CPF11_11350 SM00491 CPF11_11350 CPF11_11360 SM00841 Elongation factor P, C-terminal CPF11_11360 SM01185 CPF11_11360 CPF11_11385 SM00971 Serine acetyltransferase, N-terminal CPF11_11390 SM00938 Nitrogen regulatory protein P-II CPF11_11395 SM00984 UDP binding domain CPF11_11535 SM00091 PAS domain CPF11_11535 SM00387 Histidine kinase-like ATPases CPF11_11535 SM00388 His Kinase A (phosphoacceptor) domain CPF11_11540 SM00382 ATPases associated with a variety of cellular activities CPF11_11540 SM00448 cheY-homologous receiver domain CPF11_11545 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CPF11_11545 SM00387 Histidine kinase-like ATPases CPF11_11545 SM00388 His Kinase A (phosphoacceptor) domain CPF11_11550 SM00382 ATPases associated with a variety of cellular activities CPF11_11550 SM00448 cheY-homologous receiver domain CPF11_11570 SM00382 ATPases associated with a variety of cellular activities CPF11_11570 SM01086 C-terminal, D2-small domain, of ClpB protein CPF11_11645 SM00564 beta-propeller repeat CPF11_11650 SM00382 ATPases associated with a variety of cellular activities CPF11_11680 SM00382 ATPases associated with a variety of cellular activities CPF11_11685 SM00363 S4 RNA-binding domain CPF11_11705 SM00382 ATPases associated with a variety of cellular activities CPF11_11705 SM00962 SRP54-type protein, GTPase domain CPF11_11705 SM00963 SRP54-type protein, helical bundle domain CPF11_11740 SM01329 CPF11_11740 CPF11_11760 SM00347 helix_turn_helix multiple antibiotic resistance protein CPF11_11765 SM00448 cheY-homologous receiver domain CPF11_11765 SM00862 Transcriptional regulatory protein, C terminal CPF11_11770 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CPF11_11770 SM00387 Histidine kinase-like ATPases CPF11_11770 SM00388 His Kinase A (phosphoacceptor) domain CPF11_11800 SM00411 bacterial (prokaryotic) histone like domain CPF11_11805 SM00422 helix_turn_helix, mercury resistance CPF11_11825 SM00986 Uracil DNA glycosylase superfamily CPF11_11825 SM00987 UreE urease accessory protein, C-terminal domain CPF11_11830 SM00411 bacterial (prokaryotic) histone like domain CPF11_11850 SM00344 helix_turn_helix ASNC type CPF11_11895 SM00978 CPF11_11895 CPF11_11925 SM00028 Tetratricopeptide repeats CPF11_11930 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CPF11_11930 SM00534 ATPase domain of DNA mismatch repair MUTS family CPF11_11945 SM00382 ATPases associated with a variety of cellular activities CPF11_11960 SM00838 Elongation factor G C-terminus CPF11_11960 SM00889 Elongation factor G, domain IV CPF11_11990 SM00382 ATPases associated with a variety of cellular activities CPF11_12025 SM00487 DEAD-like helicases superfamily CPF11_12025 SM00490 helicase superfamily c-terminal domain CPF11_12055 SM00382 ATPases associated with a variety of cellular activities CPF11_12055 SM00994 ClpX C4-type zinc finger CPF11_12055 SM01086 C-terminal, D2-small domain, of ClpB protein CPF11_12060 SM00382 ATPases associated with a variety of cellular activities CPF11_12060 SM00464 Found in ATP-dependent protease La (LON) CPF11_12065 SM00411 bacterial (prokaryotic) histone like domain CPF11_12100 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CPF11_12105 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CPF11_12150 SM00849 Metallo-beta-lactamase superfamily CPF11_12165 SM00382 ATPases associated with a variety of cellular activities CPF11_12175 SM00346 helix_turn_helix isocitrate lyase regulation CPF11_12300 SM00822 CPF11_12300 CPF11_12325 SM00422 helix_turn_helix, mercury resistance CPF11_12440 SM00829 Enoylreductase CPF11_12455 SM00382 ATPases associated with a variety of cellular activities CPF11_12480 SM00870 CPF11_12480 CPF11_12490 SM00671 Sel1-like repeats. CPF11_12500 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. CPF11_12505 SM00382 ATPases associated with a variety of cellular activities CPF11_12510 SM00382 ATPases associated with a variety of cellular activities CPF11_12550 SM00729 Elongator protein 3, MiaB family, Radical SAM CPF11_12590 SM00014 Acid phosphatase homologues CPF11_12600 SM00382 ATPases associated with a variety of cellular activities CPF11_12605 SM00382 ATPases associated with a variety of cellular activities CPF11_12625 SM00116 Domain in cystathionine beta-synthase and other proteins. CPF11_12625 SM01240 CPF11_12625 CPF11_12645 SM00448 cheY-homologous receiver domain CPF11_12645 SM00862 Transcriptional regulatory protein, C terminal CPF11_12690 SM00363 S4 RNA-binding domain CPF11_12695 SM00861 Transketolase, pyrimidine binding domain CPF11_12735 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CPF11_12755 SM00852 Probable molybdopterin binding domain CPF11_12795 SM00890 Domain of unknown function CPF11_12855 SM00564 beta-propeller repeat CPF11_12880 SM00886 Stress responsive A/B Barrel Domain CPF11_12990 SM01236 CPF11_12990 CPF11_13030 SM00481 DNA polymerase alpha chain like domain CPF11_13040 SM00470 ParB-like nuclease domain CPF11_13120 SM00953 CPF11_13120 CPF11_13130 SM00411 bacterial (prokaryotic) histone like domain CPF11_13300 SM00829 Enoylreductase CPF11_13340 SM00867 YceI-like domain CPF11_13390 SM00487 DEAD-like helicases superfamily CPF11_13500 SM00091 PAS domain CPF11_13595 SM00382 ATPases associated with a variety of cellular activities CPF11_13655 SM00448 cheY-homologous receiver domain CPF11_13655 SM00862 Transcriptional regulatory protein, C terminal CPF11_13660 SM00387 Histidine kinase-like ATPases CPF11_13660 SM00388 His Kinase A (phosphoacceptor) domain CPF11_13815 SM00966 SpoVT / AbrB like domain CPF11_13825 SM00966 SpoVT / AbrB like domain CPF11_13870 SM01040 BRO family, N-terminal domain CPF11_13875 SM00411 bacterial (prokaryotic) histone like domain CPF11_13880 SM00773 Proposed nucleic acid binding domain CPF11_13940 SM00091 PAS domain CPF11_14055 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CPF11_14085 SM00530 Helix-turn-helix XRE-family like proteins CPF11_14135 SM00857 Resolvase, N terminal domain CPF11_14245 SM00857 Resolvase, N terminal domain CPF11_14250 SM00857 Resolvase, N terminal domain CPF11_14260 SM00857 Resolvase, N terminal domain