CPF11_00005	SSF46785	"Winged helix" DNA-binding domain
CPF11_00005	SSF53850	Periplasmic binding protein-like II
CPF11_00010	SSF51395	FMN-linked oxidoreductases
CPF11_00015	SSF51197	Clavaminate synthase-like
CPF11_00020	SSF51735	NAD(P)-binding Rossmann-fold domains
CPF11_00035	SSF88723	PIN domain-like
CPF11_00040	SSF57868	Metallothionein
CPF11_00045	SSF46785	"Winged helix" DNA-binding domain
CPF11_00050	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_00050	SSF90123	ABC transporter transmembrane region
CPF11_00055	SSF52954	Class II aaRS ABD-related
CPF11_00055	SSF55186	ThrRS/AlaRS common domain
CPF11_00055	SSF55681	Class II aaRS and biotin synthetases
CPF11_00060	SSF46785	"Winged helix" DNA-binding domain
CPF11_00070	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
CPF11_00075	SSF141734	HisI-like
CPF11_00080	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_00100	SSF46955	Putative DNA-binding domain
CPF11_00115	SSF51306	LexA/Signal peptidase
CPF11_00125	SSF53955	Lysozyme-like
CPF11_00135	SSF63380	Riboflavin synthase domain-like
CPF11_00140	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CPF11_00145	SSF46689	Homeodomain-like
CPF11_00145	SSF51182	RmlC-like cupins
CPF11_00150	SSF88723	PIN domain-like
CPF11_00155	SSF143120	YefM-like
CPF11_00170	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_00180	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_00195	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_00210	SSF54427	NTF2-like
CPF11_00230	SSF46785	"Winged helix" DNA-binding domain
CPF11_00230	SSF53850	Periplasmic binding protein-like II
CPF11_00235	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
CPF11_00235	SSF88946	Sigma2 domain of RNA polymerase sigma factors
CPF11_00245	SSF56935	Porins
CPF11_00270	SSF74653	TolA/TonB C-terminal domain
CPF11_00275	SSF46785	"Winged helix" DNA-binding domain
CPF11_00280	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
CPF11_00280	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
CPF11_00280	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
CPF11_00290	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CPF11_00305	SSF52980	Restriction endonuclease-like
CPF11_00310	SSF56349	DNA breaking-rejoining enzymes
CPF11_00315	SSF46785	"Winged helix" DNA-binding domain
CPF11_00315	SSF53383	PLP-dependent transferases
CPF11_00335	SSF55826	YbaK/ProRS associated domain
CPF11_00340	SSF103481	Multidrug resistance efflux transporter EmrE
CPF11_00350	SSF47413	lambda repressor-like DNA-binding domains
CPF11_00350	SSF51306	LexA/Signal peptidase
CPF11_00355	SSF47413	lambda repressor-like DNA-binding domains
CPF11_00360	SSF110849	ParB/Sulfiredoxin
CPF11_00365	SSF47413	lambda repressor-like DNA-binding domains
CPF11_00375	SSF46689	Homeodomain-like
CPF11_00375	SSF46955	Putative DNA-binding domain
CPF11_00375	SSF50610	mu transposase, C-terminal domain
CPF11_00375	SSF53098	Ribonuclease H-like
CPF11_00380	SSF47413	lambda repressor-like DNA-binding domains
CPF11_00380	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_00425	SSF53955	Lysozyme-like
CPF11_00495	SSF160059	PriA/YqbF domain
CPF11_00540	SSF69279	Phage tail proteins
CPF11_00575	SSF49899	Concanavalin A-like lectins/glucanases
CPF11_00575	SSF75005	Arabinanase/levansucrase/invertase
CPF11_00615	SSF74653	TolA/TonB C-terminal domain
CPF11_00620	SSF46785	"Winged helix" DNA-binding domain
CPF11_00630	SSF46785	"Winged helix" DNA-binding domain
CPF11_00640	SSF53807	"Helical backbone" metal receptor
CPF11_00645	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
CPF11_00650	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_00655	SSF54909	Dimeric alpha+beta barrel
CPF11_00660	SSF48613	Heme oxygenase-like
CPF11_00665	SSF56935	Porins
CPF11_00670	SSF55469	FMN-dependent nitroreductase-like
CPF11_00675	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
CPF11_00675	SSF56645	Acyl-CoA dehydrogenase NM domain-like
CPF11_00685	SSF51679	Bacterial luciferase-like
CPF11_00690	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_00690	SSF52980	Restriction endonuclease-like
CPF11_00695	SSF53474	alpha/beta-Hydrolases
CPF11_00700	SSF75304	Amidase signature (AS) enzymes
CPF11_00705	SSF160467	PH0987 N-terminal domain-like
CPF11_00705	SSF50891	Cyclophilin-like
CPF11_00705	SSF51230	Single hybrid motif
CPF11_00705	SSF51246	Rudiment single hybrid motif
CPF11_00705	SSF52440	PreATP-grasp domain
CPF11_00705	SSF56059	Glutathione synthetase ATP-binding domain-like
CPF11_00720	SSF47598	Ribbon-helix-helix
CPF11_00720	SSF55021	ACT-like
CPF11_00725	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_00730	SSF161098	MetI-like
CPF11_00735	SSF53850	Periplasmic binding protein-like II
CPF11_00740	SSF51338	Composite domain of metallo-dependent hydrolases
CPF11_00740	SSF51556	Metallo-dependent hydrolases
CPF11_00745	SSF103473	MFS general substrate transporter
CPF11_00755	SSF54427	NTF2-like
CPF11_00770	SSF46689	Homeodomain-like
CPF11_00775	SSF103481	Multidrug resistance efflux transporter EmrE
CPF11_00780	SSF53098	Ribonuclease H-like
CPF11_00785	SSF111369	HlyD-like secretion proteins
CPF11_00790	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
CPF11_00790	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
CPF11_00790	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
CPF11_00795	SSF56954	Outer membrane efflux proteins (OEP)
CPF11_00800	SSF53067	Actin-like ATPase domain
CPF11_00805	SSF143081	BB1717-like
CPF11_00810	SSF117396	TM1631-like
CPF11_00815	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_00815	SSF90123	ABC transporter transmembrane region
CPF11_00820	SSF56935	Porins
CPF11_00835	SSF53613	Ribokinase-like
CPF11_00840	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CPF11_00845	SSF51338	Composite domain of metallo-dependent hydrolases
CPF11_00845	SSF51556	Metallo-dependent hydrolases
CPF11_00850	SSF48208	Six-hairpin glycosidases
CPF11_00850	SSF74650	Galactose mutarotase-like
CPF11_00860	SSF110916	Peptidyl-tRNA hydrolase domain-like
CPF11_00865	SSF52317	Class I glutamine amidotransferase-like
CPF11_00865	SSF56634	Heme-dependent catalase-like
CPF11_00875	SSF53474	alpha/beta-Hydrolases
CPF11_00880	SSF46689	Homeodomain-like
CPF11_00880	SSF48498	Tetracyclin repressor-like, C-terminal domain
CPF11_00885	SSF46689	Homeodomain-like
CPF11_00890	SSF48239	Terpenoid cyclases/Protein prenyltransferases
CPF11_00900	SSF56954	Outer membrane efflux proteins (OEP)
CPF11_00910	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_00915	SSF111369	HlyD-like secretion proteins
CPF11_00920	SSF52833	Thioredoxin-like
CPF11_00925	SSF74653	TolA/TonB C-terminal domain
CPF11_00945	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
CPF11_00950	SSF51338	Composite domain of metallo-dependent hydrolases
CPF11_00950	SSF51556	Metallo-dependent hydrolases
CPF11_00955	SSF46785	"Winged helix" DNA-binding domain
CPF11_00955	SSF53850	Periplasmic binding protein-like II
CPF11_00960	SSF51905	FAD/NAD(P)-binding domain
CPF11_00965	SSF88713	Glycoside hydrolase/deacetylase
CPF11_00970	SSF158694	UraD-Like
CPF11_00975	SSF49472	Transthyretin (synonym: prealbumin)
CPF11_00985	SSF47741	CO dehydrogenase ISP C-domain like
CPF11_00985	SSF54292	2Fe-2S ferredoxin-like
CPF11_00985	SSF55447	CO dehydrogenase flavoprotein C-terminal domain-like
CPF11_00985	SSF56176	FAD-binding/transporter-associated domain-like
CPF11_00990	SSF54665	CO dehydrogenase molybdoprotein N-domain-like
CPF11_00990	SSF56003	Molybdenum cofactor-binding domain
CPF11_01000	SSF75304	Amidase signature (AS) enzymes
CPF11_01010	SSF54427	NTF2-like
CPF11_01015	SSF53383	PLP-dependent transferases
CPF11_01020	SSF53187	Zn-dependent exopeptidases
CPF11_01020	SSF55031	Bacterial exopeptidase dimerisation domain
CPF11_01025	SSF56935	Porins
CPF11_01030	SSF51338	Composite domain of metallo-dependent hydrolases
CPF11_01030	SSF51556	Metallo-dependent hydrolases
CPF11_01040	SSF161098	MetI-like
CPF11_01045	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_01055	SSF53850	Periplasmic binding protein-like II
CPF11_01060	SSF51338	Composite domain of metallo-dependent hydrolases
CPF11_01060	SSF51556	Metallo-dependent hydrolases
CPF11_01065	SSF54506	Diaminopimelate epimerase-like
CPF11_01070	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
CPF11_01070	SSF51735	NAD(P)-binding Rossmann-fold domains
CPF11_01080	SSF57783	Zinc beta-ribbon
CPF11_01080	SSF82057	Prokaryotic SH3-related domain
CPF11_01085	SSF50129	GroES-like
CPF11_01085	SSF51735	NAD(P)-binding Rossmann-fold domains
CPF11_01090	SSF48208	Six-hairpin glycosidases
CPF11_01095	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_01100	SSF52172	CheY-like
CPF11_01105	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
CPF11_01105	SSF88946	Sigma2 domain of RNA polymerase sigma factors
CPF11_01110	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
CPF11_01110	SSF88946	Sigma2 domain of RNA polymerase sigma factors
CPF11_01120	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CPF11_01125	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_01125	SSF90123	ABC transporter transmembrane region
CPF11_01130	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_01130	SSF90123	ABC transporter transmembrane region
CPF11_01135	SSF103088	OmpA-like
CPF11_01140	SSF46785	"Winged helix" DNA-binding domain
CPF11_01140	SSF47819	HRDC-like
CPF11_01140	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_01145	SSF100950	NagB/RpiA/CoA transferase-like
CPF11_01145	SSF46785	"Winged helix" DNA-binding domain
CPF11_01150	SSF51905	FAD/NAD(P)-binding domain
CPF11_01150	SSF54373	FAD-linked reductases, C-terminal domain
CPF11_01155	SSF81338	Aquaporin-like
CPF11_01160	SSF53067	Actin-like ATPase domain
CPF11_01165	SSF110087	DR1885-like metal-binding protein
CPF11_01175	SSF48013	NusB-like
CPF11_01180	SSF55326	PurM N-terminal domain-like
CPF11_01180	SSF56042	PurM C-terminal domain-like
CPF11_01185	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CPF11_01190	SSF51735	NAD(P)-binding Rossmann-fold domains
CPF11_01215	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CPF11_01220	SSF56954	Outer membrane efflux proteins (OEP)
CPF11_01230	SSF46589	tRNA-binding arm
CPF11_01230	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
CPF11_01230	SSF50677	ValRS/IleRS/LeuRS editing domain
CPF11_01230	SSF52374	Nucleotidylyl transferase
CPF11_01235	SSF55068	Peptide methionine sulfoxide reductase
CPF11_01240	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_01245	SSF161098	MetI-like
CPF11_01250	SSF51283	dUTPase-like
CPF11_01255	SSF102645	CoaB-like
CPF11_01255	SSF52507	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
CPF11_01260	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CPF11_01265	SSF46946	S13-like H2TH domain
CPF11_01265	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
CPF11_01265	SSF81624	N-terminal domain of MutM-like DNA repair proteins
CPF11_01270	SSF46992	Ribosomal protein S20
CPF11_01275	SSF48295	TrpR-like
CPF11_01275	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_01280	SSF55979	DNA clamp
CPF11_01285	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_01290	SSF54211	Ribosomal protein S5 domain 2-like
CPF11_01290	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CPF11_01290	SSF56719	Type II DNA topoisomerase
CPF11_01295	SSF51569	Aldolase
CPF11_01300	SSF52317	Class I glutamine amidotransferase-like
CPF11_01300	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_01310	SSF51351	Triosephosphate isomerase (TIM)
CPF11_01315	SSF109998	Triger factor/SurA peptide-binding domain-like
CPF11_01315	SSF54534	FKBP-like
CPF11_01320	SSF56322	ADC synthase
CPF11_01325	SSF52317	Class I glutamine amidotransferase-like
CPF11_01330	SSF47648	Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
CPF11_01330	SSF52418	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
CPF11_01335	SSF51366	Ribulose-phoshate binding barrel
CPF11_01340	SSF55040	Molybdenum cofactor biosynthesis protein C, MoaC
CPF11_01345	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
CPF11_01350	SSF51230	Single hybrid motif
CPF11_01350	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
CPF11_01350	SSF52922	TK C-terminal domain-like
CPF11_01355	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
CPF11_01355	SSF51230	Single hybrid motif
CPF11_01355	SSF52777	CoA-dependent acyltransferases
CPF11_01360	SSF51905	FAD/NAD(P)-binding domain
CPF11_01360	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
CPF11_01365	SSF102114	Radical SAM enzymes
CPF11_01370	SSF55961	Bet v1-like
CPF11_01380	SSF142433	CinA-like
CPF11_01385	SSF101307	YutG-like
CPF11_01390	SSF48435	Bacterial muramidases
CPF11_01390	SSF53955	Lysozyme-like
CPF11_01400	SSF48557	L-aspartase-like
CPF11_01405	SSF56104	SAICAR synthase-like
CPF11_01410	SSF82697	PurS-like
CPF11_01420	SSF52317	Class I glutamine amidotransferase-like
CPF11_01425	SSF55326	PurM N-terminal domain-like
CPF11_01425	SSF56042	PurM C-terminal domain-like
CPF11_01430	SSF82657	BolA-like
CPF11_01435	SSF52833	Thioredoxin-like
CPF11_01445	SSF52980	Restriction endonuclease-like
CPF11_01450	SSF56024	Phospholipase D/nuclease
CPF11_01455	SSF56219	DNase I-like
CPF11_01465	SSF52821	Rhodanese/Cell cycle control phosphatase
CPF11_01470	SSF53383	PLP-dependent transferases
CPF11_01475	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_01475	SSF54211	Ribosomal protein S5 domain 2-like
CPF11_01480	SSF51735	NAD(P)-binding Rossmann-fold domains
CPF11_01480	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
CPF11_01480	SSF55021	ACT-like
CPF11_01485	SSF56655	Carbohydrate phosphatase
CPF11_01490	SSF46626	Cytochrome c
CPF11_01495	SSF53448	Nucleotide-diphospho-sugar transferases
CPF11_01500	SSF53850	Periplasmic binding protein-like II
CPF11_01500	SSF55021	ACT-like
CPF11_01505	SSF51569	Aldolase
CPF11_01510	SSF74982	Small protein B (SmpB)
CPF11_01515	SSF50249	Nucleic acid-binding proteins
CPF11_01530	SSF53850	Periplasmic binding protein-like II
CPF11_01535	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CPF11_01545	SSF52151	FabD/lysophospholipase-like
CPF11_01545	SSF55048	Probable ACP-binding domain of malonyl-CoA ACP transacylase
CPF11_01550	SSF51735	NAD(P)-binding Rossmann-fold domains
CPF11_01555	SSF47336	ACP-like
CPF11_01560	SSF53901	Thiolase-like
CPF11_01575	SSF56655	Carbohydrate phosphatase
CPF11_01585	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_01590	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CPF11_01600	SSF55124	Nitrite/Sulfite reductase N-terminal domain-like
CPF11_01600	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
CPF11_01610	SSF50447	Translation proteins
CPF11_01610	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
CPF11_01610	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_01615	SSF52402	Adenine nucleotide alpha hydrolases-like
CPF11_01620	SSF52402	Adenine nucleotide alpha hydrolases-like
CPF11_01630	SSF102114	Radical SAM enzymes
CPF11_01635	SSF102114	Radical SAM enzymes
CPF11_01640	SSF52402	Adenine nucleotide alpha hydrolases-like
CPF11_01645	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
CPF11_01650	SSF51905	FAD/NAD(P)-binding domain
CPF11_01655	SSF82784	OsmC-like
CPF11_01660	SSF103263	Chorismate synthase, AroC
CPF11_01665	SSF51735	NAD(P)-binding Rossmann-fold domains
CPF11_01670	SSF50475	FMN-binding split barrel
CPF11_01675	SSF52402	Adenine nucleotide alpha hydrolases-like
CPF11_01680	SSF56281	Metallo-hydrolase/oxidoreductase
CPF11_01685	SSF51556	Metallo-dependent hydrolases
CPF11_01690	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
CPF11_01690	SSF52374	Nucleotidylyl transferase
CPF11_01695	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_01700	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_01705	SSF56601	beta-lactamase/transpeptidase-like
CPF11_01705	SSF69189	Penicillin-binding protein associated domain
CPF11_01710	SSF110997	Sporulation related repeat
CPF11_01715	SSF53955	Lysozyme-like
CPF11_01725	SSF56059	Glutathione synthetase ATP-binding domain-like
CPF11_01760	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CPF11_01770	SSF75620	Release factor
CPF11_01775	SSF52954	Class II aaRS ABD-related
CPF11_01775	SSF55681	Class II aaRS and biotin synthetases
CPF11_01780	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
CPF11_01780	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
CPF11_01785	SSF47413	lambda repressor-like DNA-binding domains
CPF11_01790	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
CPF11_01795	SSF53633	Carbamate kinase-like
CPF11_01795	SSF55021	ACT-like
CPF11_01800	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CPF11_01805	SSF51004	C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
CPF11_01820	SSF52833	Thioredoxin-like
CPF11_01825	SSF53271	PRTase-like
CPF11_01830	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CPF11_01835	SSF102114	Radical SAM enzymes
CPF11_01840	SSF53738	Phosphoglucomutase, first 3 domains
CPF11_01840	SSF55957	Phosphoglucomutase, C-terminal domain
CPF11_01845	SSF53448	Nucleotide-diphospho-sugar transferases
CPF11_01855	SSF55681	Class II aaRS and biotin synthetases
CPF11_01860	SSF89392	Prokaryotic lipoproteins and lipoprotein localization factors
CPF11_01865	SSF82657	BolA-like
CPF11_01870	SSF46565	Chaperone J-domain
CPF11_01875	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_01880	SSF53300	vWA-like
CPF11_01885	SSF53383	PLP-dependent transferases
CPF11_01900	SSF141259	CarD-like
CPF11_01900	SSF143517	TRCF domain-like
CPF11_01900	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_01905	SSF109910	YgfY-like
CPF11_01910	SSF50249	Nucleic acid-binding proteins
CPF11_01910	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_01915	SSF51391	Thiamin phosphate synthase
CPF11_01920	SSF110399	ThiG-like
CPF11_01925	SSF54285	MoaD/ThiS
CPF11_01930	SSF51971	Nucleotide-binding domain
CPF11_01930	SSF54373	FAD-linked reductases, C-terminal domain
CPF11_01940	SSF51604	Enolase C-terminal domain-like
CPF11_01940	SSF54826	Enolase N-terminal domain-like
CPF11_01950	SSF57829	Zn-binding ribosomal proteins
CPF11_01955	SSF53218	Molybdenum cofactor biosynthesis proteins
CPF11_01955	SSF63867	MoeA C-terminal domain-like
CPF11_01955	SSF63882	MoeA N-terminal region -like
CPF11_01960	SSF46785	"Winged helix" DNA-binding domain
CPF11_01960	SSF51306	LexA/Signal peptidase
CPF11_01965	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_01965	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CPF11_01970	SSF53474	alpha/beta-Hydrolases
CPF11_01975	SSF53383	PLP-dependent transferases
CPF11_01980	SSF53383	PLP-dependent transferases
CPF11_01985	SSF54690	Molybdopterin synthase subunit MoaE
CPF11_01990	SSF54285	MoaD/ThiS
CPF11_02005	SSF46600	C-terminal UvrC-binding domain of UvrB
CPF11_02005	SSF47781	RuvA domain 2-like
CPF11_02005	SSF82771	GIY-YIG endonuclease
CPF11_02010	SSF51556	Metallo-dependent hydrolases
CPF11_02015	SSF56219	DNase I-like
CPF11_02030	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
CPF11_02035	SSF102114	Radical SAM enzymes
CPF11_02040	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_02045	SSF55486	Metalloproteases ("zincins"), catalytic domain
CPF11_02050	SSF54631	CBS-domain pair
CPF11_02050	SSF56176	FAD-binding/transporter-associated domain-like
CPF11_02055	SSF52833	Thioredoxin-like
CPF11_02060	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_02060	SSF57997	Tropomyosin
CPF11_02060	SSF75553	Smc hinge domain
CPF11_02065	SSF51695	PLC-like phosphodiesterases
CPF11_02070	SSF100950	NagB/RpiA/CoA transferase-like
CPF11_02075	SSF56300	Metallo-dependent phosphatases
CPF11_02080	SSF48600	Chorismate mutase II
CPF11_02085	SSF53254	Phosphoglycerate mutase-like
CPF11_02090	SSF48256	Citrate synthase
CPF11_02100	SSF53271	PRTase-like
CPF11_02105	SSF53681	Aspartate/glutamate racemase
CPF11_02110	SSF48576	Terpenoid synthases
CPF11_02115	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CPF11_02120	SSF47240	Ferritin-like
CPF11_02125	SSF48168	R1 subunit of ribonucleotide reductase, N-terminal domain
CPF11_02125	SSF51998	PFL-like glycyl radical enzymes
CPF11_02130	SSF51735	NAD(P)-binding Rossmann-fold domains
CPF11_02130	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
CPF11_02135	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
CPF11_02140	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
CPF11_02150	SSF81330	Gated mechanosensitive channel
CPF11_02155	SSF143800	L28p-like
CPF11_02160	SSF49764	HSP20-like chaperones
CPF11_02180	SSF52255	N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
CPF11_02185	SSF51246	Rudiment single hybrid motif
CPF11_02185	SSF52440	PreATP-grasp domain
CPF11_02185	SSF56059	Glutathione synthetase ATP-binding domain-like
CPF11_02190	SSF102712	JAB1/MPN domain
CPF11_02195	SSF47781	RuvA domain 2-like
CPF11_02200	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_02205	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CPF11_02210	SSF53092	Creatinase/prolidase N-terminal domain
CPF11_02210	SSF55920	Creatinase/aminopeptidase
CPF11_02215	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
CPF11_02220	SSF55811	Nudix
CPF11_02225	SSF50447	Translation proteins
CPF11_02225	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_02225	SSF54980	EF-G C-terminal domain-like
CPF11_02230	SSF55174	Alpha-L RNA-binding motif
CPF11_02240	SSF51206	cAMP-binding domain-like
CPF11_02255	SSF53850	Periplasmic binding protein-like II
CPF11_02260	SSF53850	Periplasmic binding protein-like II
CPF11_02265	SSF46955	Putative DNA-binding domain
CPF11_02265	SSF50249	Nucleic acid-binding proteins
CPF11_02265	SSF54991	Anticodon-binding domain of PheRS
CPF11_02265	SSF55681	Class II aaRS and biotin synthetases
CPF11_02265	SSF56037	PheT/TilS domain
CPF11_02270	SSF46589	tRNA-binding arm
CPF11_02270	SSF55681	Class II aaRS and biotin synthetases
CPF11_02275	SSF74731	Ribosomal protein L20
CPF11_02280	SSF143034	L35p-like
CPF11_02285	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
CPF11_02285	SSF51735	NAD(P)-binding Rossmann-fold domains
CPF11_02290	SSF46626	Cytochrome c
CPF11_02295	SSF47741	CO dehydrogenase ISP C-domain like
CPF11_02295	SSF54292	2Fe-2S ferredoxin-like
CPF11_02300	SSF56003	Molybdenum cofactor-binding domain
CPF11_02305	SSF82649	SufE/NifU
CPF11_02310	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_02315	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
CPF11_02320	SSF47384	Homodimeric domain of signal transducing histidine kinase
CPF11_02320	SSF52172	CheY-like
CPF11_02320	SSF55785	PYP-like sensor domain (PAS domain)
CPF11_02320	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CPF11_02325	SSF47384	Homodimeric domain of signal transducing histidine kinase
CPF11_02325	SSF52172	CheY-like
CPF11_02325	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CPF11_02340	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_02355	SSF53474	alpha/beta-Hydrolases
CPF11_02365	SSF141259	CarD-like
CPF11_02370	SSF48452	TPR-like
CPF11_02370	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CPF11_02375	SSF53822	Periplasmic binding protein-like I
CPF11_02380	SSF53790	Tetrapyrrole methylase
CPF11_02385	SSF160996	HI0933 insert domain-like
CPF11_02385	SSF51905	FAD/NAD(P)-binding domain
CPF11_02390	SSF47616	GST C-terminal domain-like
CPF11_02390	SSF52833	Thioredoxin-like
CPF11_02395	SSF63848	Cell-division inhibitor MinC, C-terminal domain
CPF11_02400	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_02405	SSF55229	Cell division protein MinE topological specificity domain
CPF11_02410	SSF46785	"Winged helix" DNA-binding domain
CPF11_02410	SSF48008	GntR ligand-binding domain-like
CPF11_02415	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_02415	SSF90123	ABC transporter transmembrane region
CPF11_02420	SSF56935	Porins
CPF11_02440	SSF109998	Triger factor/SurA peptide-binding domain-like
CPF11_02440	SSF54534	FKBP-like
CPF11_02445	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CPF11_02450	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CPF11_02455	SSF55653	Ribosomal protein L9 C-domain
CPF11_02455	SSF55658	L9 N-domain-like
CPF11_02460	SSF46911	Ribosomal protein S18
CPF11_02465	SSF54995	Ribosomal protein S6
CPF11_02470	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CPF11_02475	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
CPF11_02475	SSF88946	Sigma2 domain of RNA polymerase sigma factors
CPF11_02480	SSF56731	DNA primase core
CPF11_02480	SSF57783	Zinc beta-ribbon
CPF11_02485	SSF89095	GatB/YqeY motif
CPF11_02490	SSF52021	Carbamoyl phosphate synthetase, small subunit N-terminal domain
CPF11_02490	SSF52317	Class I glutamine amidotransferase-like
CPF11_02495	SSF48108	Carbamoyl phosphate synthetase, large subunit connection domain
CPF11_02495	SSF52335	Methylglyoxal synthase-like
CPF11_02495	SSF52440	PreATP-grasp domain
CPF11_02495	SSF56059	Glutathione synthetase ATP-binding domain-like
CPF11_02500	SSF46557	GreA transcript cleavage protein, N-terminal domain
CPF11_02500	SSF54534	FKBP-like
CPF11_02505	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
CPF11_02505	SSF55021	ACT-like
CPF11_02510	SSF53649	Alkaline phosphatase-like
CPF11_02510	SSF64158	2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
CPF11_02515	SSF51261	Duplicated hybrid motif
CPF11_02525	SSF50156	PDZ domain-like
CPF11_02525	SSF52096	ClpP/crotonase
CPF11_02530	SSF88713	Glycoside hydrolase/deacetylase
CPF11_02535	SSF55811	Nudix
CPF11_02540	SSF103473	MFS general substrate transporter
CPF11_02545	SSF111369	HlyD-like secretion proteins
CPF11_02550	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_02550	SSF90123	ABC transporter transmembrane region
CPF11_02555	SSF81301	Nucleotidyltransferase
CPF11_02555	SSF81891	Poly A polymerase C-terminal region-like
CPF11_02565	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_02575	SSF52317	Class I glutamine amidotransferase-like
CPF11_02580	SSF52317	Class I glutamine amidotransferase-like
CPF11_02585	SSF48403	Ankyrin repeat
CPF11_02590	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CPF11_02595	SSF53098	Ribonuclease H-like
CPF11_02600	SSF69047	Hypothetical protein YjbJ
CPF11_02605	SSF103473	MFS general substrate transporter
CPF11_02610	SSF111369	HlyD-like secretion proteins
CPF11_02615	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
CPF11_02615	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
CPF11_02615	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
CPF11_02620	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
CPF11_02620	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
CPF11_02620	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
CPF11_02625	SSF56954	Outer membrane efflux proteins (OEP)
CPF11_02640	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_02645	SSF161098	MetI-like
CPF11_02650	SSF53850	Periplasmic binding protein-like II
CPF11_02655	SSF64263	Prokaryotic ribosomal protein L17
CPF11_02660	SSF47789	C-terminal domain of RNA polymerase alpha subunit
CPF11_02660	SSF55257	RBP11-like subunits of RNA polymerase
CPF11_02660	SSF56553	Insert subdomain of RNA polymerase alpha subunit
CPF11_02665	SSF53137	Translational machinery components
CPF11_02670	SSF46946	S13-like H2TH domain
CPF11_02675	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_02675	SSF57774	Microbial and mitochondrial ADK, insert "zinc finger" domain
CPF11_02680	SSF103491	Preprotein translocase SecY subunit
CPF11_02685	SSF52080	Ribosomal proteins L15p and L18e
CPF11_02690	SSF55129	Ribosomal protein L30p/L7e
CPF11_02695	SSF54211	Ribosomal protein S5 domain 2-like
CPF11_02695	SSF54768	dsRNA-binding domain-like
CPF11_02700	SSF53137	Translational machinery components
CPF11_02705	SSF56053	Ribosomal protein L6
CPF11_02710	SSF56047	Ribosomal protein S8
CPF11_02715	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
CPF11_02720	SSF55282	RL5-like
CPF11_02725	SSF50104	Translation proteins SH3-like domain
CPF11_02730	SSF50193	Ribosomal protein L14
CPF11_02735	SSF50249	Nucleic acid-binding proteins
CPF11_02740	SSF46561	Ribosomal protein L29 (L29p)
CPF11_02745	SSF54686	Ribosomal protein L16p/L10e
CPF11_02750	SSF54814	Prokaryotic type KH domain (KH-domain type II)
CPF11_02750	SSF54821	Ribosomal protein S3 C-terminal domain
CPF11_02755	SSF54843	Ribosomal protein L22
CPF11_02760	SSF54570	Ribosomal protein S19
CPF11_02765	SSF50104	Translation proteins SH3-like domain
CPF11_02765	SSF50249	Nucleic acid-binding proteins
CPF11_02770	SSF54189	Ribosomal proteins S24e, L23 and L15e
CPF11_02775	SSF52166	Ribosomal protein L4
CPF11_02780	SSF50447	Translation proteins
CPF11_02785	SSF54999	Ribosomal protein S10
CPF11_02790	SSF50447	Translation proteins
CPF11_02790	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
CPF11_02790	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_02795	SSF47973	Ribosomal protein S7
CPF11_02800	SSF50249	Nucleic acid-binding proteins
CPF11_02805	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
CPF11_02810	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
CPF11_02820	SSF48300	Ribosomal protein L7/12, oligomerisation (N-terminal) domain
CPF11_02820	SSF54736	ClpS-like
CPF11_02825	SSF160369	Ribosomal protein L10-like
CPF11_02830	SSF56808	Ribosomal protein L1
CPF11_02835	SSF46906	Ribosomal protein L11, C-terminal domain
CPF11_02835	SSF54747	Ribosomal L11/L12e N-terminal domain
CPF11_02840	SSF56954	Outer membrane efflux proteins (OEP)
CPF11_02845	SSF111369	HlyD-like secretion proteins
CPF11_02850	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
CPF11_02850	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
CPF11_02850	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
CPF11_02855	SSF158472	HAMP domain-like
CPF11_02855	SSF47384	Homodimeric domain of signal transducing histidine kinase
CPF11_02855	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CPF11_02860	SSF52172	CheY-like
CPF11_02870	SSF103473	MFS general substrate transporter
CPF11_02880	SSF52833	Thioredoxin-like
CPF11_02885	SSF81301	Nucleotidyltransferase
CPF11_02885	SSF81593	Nucleotidyltransferase substrate binding subunit/domain
CPF11_02900	SSF51004	C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
CPF11_02910	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CPF11_02915	SSF51735	NAD(P)-binding Rossmann-fold domains
CPF11_02915	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
CPF11_02930	SSF52799	(Phosphotyrosine protein) phosphatases II
CPF11_02935	SSF88697	PUA domain-like
CPF11_02940	SSF54909	Dimeric alpha+beta barrel
CPF11_02950	SSF82093	Heme chaperone CcmE
CPF11_02960	SSF52833	Thioredoxin-like
CPF11_02970	SSF48452	TPR-like
CPF11_02980	SSF140804	YidB-like
CPF11_02995	SSF81296	E set domains
CPF11_02995	SSF81324	Voltage-gated potassium channels
CPF11_03000	SSF49785	Galactose-binding domain-like
CPF11_03015	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_03025	SSF103190	Sensory domain-like
CPF11_03025	SSF55073	Nucleotide cyclase
CPF11_03025	SSF55781	GAF domain-like
CPF11_03030	SSF109604	HD-domain/PDEase-like
CPF11_03030	SSF53067	Actin-like ATPase domain
CPF11_03035	SSF140356	PPK N-terminal domain-like
CPF11_03035	SSF143724	PHP14-like
CPF11_03035	SSF56024	Phospholipase D/nuclease
CPF11_03040	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_03045	SSF55326	PurM N-terminal domain-like
CPF11_03045	SSF56042	PurM C-terminal domain-like
CPF11_03050	SSF53328	Formyltransferase
CPF11_03055	SSF48013	NusB-like
CPF11_03055	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CPF11_03060	SSF51366	Ribulose-phoshate binding barrel
CPF11_03070	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CPF11_03080	SSF53098	Ribonuclease H-like
CPF11_03085	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_03090	SSF51735	NAD(P)-binding Rossmann-fold domains
CPF11_03090	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
CPF11_03095	SSF53187	Zn-dependent exopeptidases
CPF11_03110	SSF48557	L-aspartase-like
CPF11_03115	SSF50621	Alanine racemase C-terminal domain-like
CPF11_03115	SSF51419	PLP-binding barrel
CPF11_03125	SSF51735	NAD(P)-binding Rossmann-fold domains
CPF11_03130	SSF50494	Trypsin-like serine proteases
CPF11_03135	SSF50129	GroES-like
CPF11_03135	SSF51735	NAD(P)-binding Rossmann-fold domains
CPF11_03140	SSF46785	"Winged helix" DNA-binding domain
CPF11_03145	SSF51395	FMN-linked oxidoreductases
CPF11_03150	SSF51621	Phosphoenolpyruvate/pyruvate domain
CPF11_03170	SSF57783	Zinc beta-ribbon
CPF11_03185	SSF46689	Homeodomain-like
CPF11_03225	SSF47413	lambda repressor-like DNA-binding domains
CPF11_03240	SSF47090	PGBD-like
CPF11_03280	SSF53955	Lysozyme-like
CPF11_03290	SSF143100	TTHA1013/TTHA0281-like
CPF11_03290	SSF47598	Ribbon-helix-helix
CPF11_03300	SSF56349	DNA breaking-rejoining enzymes
CPF11_03325	SSF109604	HD-domain/PDEase-like
CPF11_03325	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_03330	SSF143430	TTP0101/SSO1404-like
CPF11_03380	SSF46689	Homeodomain-like
CPF11_03385	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_03410	SSF51182	RmlC-like cupins
CPF11_03415	SSF51735	NAD(P)-binding Rossmann-fold domains
CPF11_03420	SSF55469	FMN-dependent nitroreductase-like
CPF11_03440	SSF53167	Purine and uridine phosphorylases
CPF11_03445	SSF46626	Cytochrome c
CPF11_03450	SSF81342	Transmembrane di-heme cytochromes
CPF11_03450	SSF81648	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
CPF11_03455	SSF102886	Coproporphyrinogen III oxidase
CPF11_03465	SSF160443	SMR domain-like
CPF11_03470	SSF46626	Cytochrome c
CPF11_03475	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CPF11_03480	SSF54427	NTF2-like
CPF11_03485	SSF53254	Phosphoglycerate mutase-like
CPF11_03490	SSF54611	SecB-like
CPF11_03495	SSF69618	HemD-like
CPF11_03500	SSF53850	Periplasmic binding protein-like II
CPF11_03500	SSF54782	Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
CPF11_03505	SSF53067	Actin-like ATPase domain
CPF11_03510	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CPF11_03525	SSF48163	An anticodon-binding domain of class I aminoacyl-tRNA synthetases
CPF11_03525	SSF52374	Nucleotidylyl transferase
CPF11_03530	SSF53218	Molybdenum cofactor biosynthesis proteins
CPF11_03535	SSF52096	ClpP/crotonase
CPF11_03540	SSF56349	DNA breaking-rejoining enzymes
CPF11_03550	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_03550	SSF56796	Dehydroquinate synthase-like
CPF11_03555	SSF103088	OmpA-like
CPF11_03555	SSF56925	OMPA-like
CPF11_03565	SSF101353	Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
CPF11_03565	SSF50447	Translation proteins
CPF11_03565	SSF55186	ThrRS/AlaRS common domain
CPF11_03565	SSF55681	Class II aaRS and biotin synthetases
CPF11_03580	SSF56770	HydA/Nqo6-like
CPF11_03585	SSF143243	Nqo5-like
CPF11_03585	SSF56762	HydB/Nqo4-like
CPF11_03610	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CPF11_03615	SSF56281	Metallo-hydrolase/oxidoreductase
CPF11_03625	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
CPF11_03630	SSF51735	NAD(P)-binding Rossmann-fold domains
CPF11_03630	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
CPF11_03635	SSF158634	RPA2825-like
CPF11_03645	SSF51230	Single hybrid motif
CPF11_03645	SSF51905	FAD/NAD(P)-binding domain
CPF11_03645	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
CPF11_03650	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
CPF11_03650	SSF51230	Single hybrid motif
CPF11_03650	SSF52777	CoA-dependent acyltransferases
CPF11_03655	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
CPF11_03660	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_03665	SSF69118	AhpD-like
CPF11_03675	SSF48163	An anticodon-binding domain of class I aminoacyl-tRNA synthetases
CPF11_03675	SSF52374	Nucleotidylyl transferase
CPF11_03680	SSF53671	Aspartate/ornithine carbamoyltransferase
CPF11_03685	SSF51338	Composite domain of metallo-dependent hydrolases
CPF11_03685	SSF51556	Metallo-dependent hydrolases
CPF11_03695	SSF102405	MCP/YpsA-like
CPF11_03700	SSF56712	Prokaryotic type I DNA topoisomerase
CPF11_03700	SSF57783	Zinc beta-ribbon
CPF11_03705	SSF50249	Nucleic acid-binding proteins
CPF11_03710	SSF50156	PDZ domain-like
CPF11_03710	SSF52096	ClpP/crotonase
CPF11_03720	SSF103088	OmpA-like
CPF11_03720	SSF56925	OMPA-like
CPF11_03725	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
CPF11_03730	SSF46785	"Winged helix" DNA-binding domain
CPF11_03745	SSF54211	Ribosomal protein S5 domain 2-like
CPF11_03745	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CPF11_03745	SSF56719	Type II DNA topoisomerase
CPF11_03750	SSF103481	Multidrug resistance efflux transporter EmrE
CPF11_03760	SSF118116	DNA mismatch repair protein MutL
CPF11_03760	SSF54211	Ribosomal protein S5 domain 2-like
CPF11_03760	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CPF11_03775	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
CPF11_03775	SSF50677	ValRS/IleRS/LeuRS editing domain
CPF11_03775	SSF52374	Nucleotidylyl transferase
CPF11_03780	SSF52374	Nucleotidylyl transferase
CPF11_03780	SSF82114	Riboflavin kinase-like
CPF11_03785	SSF56784	HAD-like
CPF11_03790	SSF51182	RmlC-like cupins
CPF11_03795	SSF53639	AraD/HMP-PK domain-like
CPF11_03805	SSF54001	Cysteine proteinases
CPF11_03815	SSF53383	PLP-dependent transferases
CPF11_03820	SSF53671	Aspartate/ornithine carbamoyltransferase
CPF11_03830	SSF118352	HSP33 redox switch-like
CPF11_03830	SSF64397	Hsp33 domain
CPF11_03840	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_03845	SSF50156	PDZ domain-like
CPF11_03845	SSF50494	Trypsin-like serine proteases
CPF11_03850	SSF51430	NAD(P)-linked oxidoreductase
CPF11_03855	SSF102400	DNA polymerase III chi subunit
CPF11_03860	SSF52949	Macro domain-like
CPF11_03860	SSF53187	Zn-dependent exopeptidases
CPF11_03865	SSF56655	Carbohydrate phosphatase
CPF11_03870	SSF55821	YrdC/RibB
CPF11_03880	SSF55103	FAD-linked oxidases, C-terminal domain
CPF11_03880	SSF56176	FAD-binding/transporter-associated domain-like
CPF11_03895	SSF89028	Cobalamin adenosyltransferase-like
CPF11_03905	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CPF11_03925	SSF56801	Acetyl-CoA synthetase-like
CPF11_03935	SSF46785	"Winged helix" DNA-binding domain
CPF11_03935	SSF48008	GntR ligand-binding domain-like
CPF11_03940	SSF51730	FAD-linked oxidoreductase
CPF11_03940	SSF53720	ALDH-like
CPF11_03940	SSF81935	N-terminal domain of bifunctional PutA protein
CPF11_03970	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_03970	SSF54211	Ribosomal protein S5 domain 2-like
CPF11_03975	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_03985	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_03990	SSF50182	Sm-like ribonucleoproteins
CPF11_03990	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
CPF11_03990	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
CPF11_03995	SSF48024	N-terminal domain of DnaB helicase
CPF11_03995	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_04000	SSF48208	Six-hairpin glycosidases
CPF11_04005	SSF52374	Nucleotidylyl transferase
CPF11_04005	SSF53613	Ribokinase-like
CPF11_04010	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_04015	SSF51735	NAD(P)-binding Rossmann-fold domains
CPF11_04025	SSF55315	L30e-like
CPF11_04025	SSF75217	alpha/beta knot
CPF11_04030	SSF53098	Ribonuclease H-like
CPF11_04035	SSF53697	SIS domain
CPF11_04035	SSF54631	CBS-domain pair
CPF11_04050	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_04055	SSF141673	MOSC N-terminal domain-like
CPF11_04055	SSF50800	PK beta-barrel domain-like
CPF11_04065	SSF69754	Ribosome binding protein Y (YfiA homologue)
CPF11_04075	SSF49764	HSP20-like chaperones
CPF11_04085	SSF56420	Peptide deformylase
CPF11_04090	SSF50486	FMT C-terminal domain-like
CPF11_04090	SSF53328	Formyltransferase
CPF11_04095	SSF55120	Pseudouridine synthase
CPF11_04105	SSF53187	Zn-dependent exopeptidases
CPF11_04105	SSF55031	Bacterial exopeptidase dimerisation domain
CPF11_04110	SSF51161	Trimeric LpxA-like enzymes
CPF11_04115	SSF53633	Carbamate kinase-like
CPF11_04120	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_04130	SSF54211	Ribosomal protein S5 domain 2-like
CPF11_04145	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
CPF11_04155	SSF51161	Trimeric LpxA-like enzymes
CPF11_04160	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
CPF11_04165	SSF51161	Trimeric LpxA-like enzymes
CPF11_04170	SSF111384	OmpH-like
CPF11_04180	SSF50156	PDZ domain-like
CPF11_04185	SSF51735	NAD(P)-binding Rossmann-fold domains
CPF11_04185	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
CPF11_04185	SSF69055	1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
CPF11_04195	SSF64005	Undecaprenyl diphosphate synthase
CPF11_04200	SSF55194	Ribosome recycling factor, RRF
CPF11_04205	SSF53633	Carbamate kinase-like
CPF11_04210	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_04210	SSF54814	Prokaryotic type KH domain (KH-domain type II)
CPF11_04215	SSF54768	dsRNA-binding domain-like
CPF11_04215	SSF69065	RNase III domain-like
CPF11_04220	SSF51306	LexA/Signal peptidase
CPF11_04225	SSF56214	4'-phosphopantetheinyl transferase
CPF11_04230	SSF109604	HD-domain/PDEase-like
CPF11_04230	SSF81271	TGS-like
CPF11_04230	SSF81301	Nucleotidyltransferase
CPF11_04235	SSF63562	RPB6/omega subunit-like
CPF11_04240	SSF55083	6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
CPF11_04250	SSF53056	beta-carbonic anhydrase, cab
CPF11_04255	SSF56219	DNase I-like
CPF11_04260	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_04265	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CPF11_04270	SSF53474	alpha/beta-Hydrolases
CPF11_04275	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_04275	SSF54980	EF-G C-terminal domain-like
CPF11_04280	SSF51306	LexA/Signal peptidase
CPF11_04290	SSF50998	Quinoprotein alcohol dehydrogenase-like
CPF11_04295	SSF74653	TolA/TonB C-terminal domain
CPF11_04300	SSF54368	Glutamine synthetase, N-terminal domain
CPF11_04300	SSF55931	Glutamine synthetase/guanido kinase
CPF11_04305	SSF54913	GlnB-like
CPF11_04310	SSF53383	PLP-dependent transferases
CPF11_04335	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
CPF11_04340	SSF51905	FAD/NAD(P)-binding domain
CPF11_04345	SSF51905	FAD/NAD(P)-binding domain
CPF11_04345	SSF54373	FAD-linked reductases, C-terminal domain
CPF11_04355	SSF50447	Translation proteins
CPF11_04355	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_04355	SSF54980	EF-G C-terminal domain-like
CPF11_04365	SSF103473	MFS general substrate transporter
CPF11_04370	SSF63829	Calcium-dependent phosphotriesterase
CPF11_04375	SSF50800	PK beta-barrel domain-like
CPF11_04375	SSF51621	Phosphoenolpyruvate/pyruvate domain
CPF11_04375	SSF52935	PK C-terminal domain-like
CPF11_04385	SSF69572	Activating enzymes of the ubiquitin-like proteins
CPF11_04430	SSF52402	Adenine nucleotide alpha hydrolases-like
CPF11_04435	SSF53474	alpha/beta-Hydrolases
CPF11_04440	SSF51905	FAD/NAD(P)-binding domain
CPF11_04445	SSF160240	Cation efflux protein cytoplasmic domain-like
CPF11_04445	SSF161111	Cation efflux protein transmembrane domain-like
CPF11_04450	SSF160240	Cation efflux protein cytoplasmic domain-like
CPF11_04450	SSF161111	Cation efflux protein transmembrane domain-like
CPF11_04460	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_04460	SSF90002	Hypothetical protein YjiA, C-terminal domain
CPF11_04465	SSF50998	Quinoprotein alcohol dehydrogenase-like
CPF11_04470	SSF51905	FAD/NAD(P)-binding domain
CPF11_04480	SSF49764	HSP20-like chaperones
CPF11_04485	SSF51230	Single hybrid motif
CPF11_04485	SSF53474	alpha/beta-Hydrolases
CPF11_04490	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
CPF11_04490	SSF52922	TK C-terminal domain-like
CPF11_04495	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
CPF11_04510	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_04515	SSF51294	Hedgehog/intein (Hint) domain
CPF11_04525	SSF56935	Porins
CPF11_04530	SSF55486	Metalloproteases ("zincins"), catalytic domain
CPF11_04535	SSF74653	TolA/TonB C-terminal domain
CPF11_04540	SSF51294	Hedgehog/intein (Hint) domain
CPF11_04545	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
CPF11_04555	SSF47240	Ferritin-like
CPF11_04560	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
CPF11_04565	SSF51294	Hedgehog/intein (Hint) domain
CPF11_04565	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CPF11_04575	SSF51735	NAD(P)-binding Rossmann-fold domains
CPF11_04580	SSF46785	"Winged helix" DNA-binding domain
CPF11_04590	SSF53328	Formyltransferase
CPF11_04590	SSF55021	ACT-like
CPF11_04610	SSF56112	Protein kinase-like (PK-like)
CPF11_04615	SSF56935	Porins
CPF11_04735	SSF52821	Rhodanese/Cell cycle control phosphatase
CPF11_04765	SSF102114	Radical SAM enzymes
CPF11_04775	SSF46689	Homeodomain-like
CPF11_04775	SSF53041	Resolvase-like
CPF11_04780	SSF51294	Hedgehog/intein (Hint) domain
CPF11_04795	SSF46785	"Winged helix" DNA-binding domain
CPF11_04805	SSF47413	lambda repressor-like DNA-binding domains
CPF11_04805	SSF51306	LexA/Signal peptidase
CPF11_04810	SSF51294	Hedgehog/intein (Hint) domain
CPF11_04825	SSF51294	Hedgehog/intein (Hint) domain
CPF11_04840	SSF51971	Nucleotide-binding domain
CPF11_04845	SSF46626	Cytochrome c
CPF11_04850	SSF56935	Porins
CPF11_04870	SSF51294	Hedgehog/intein (Hint) domain
CPF11_04930	SSF46689	Homeodomain-like
CPF11_04930	SSF53041	Resolvase-like
CPF11_04935	SSF51294	Hedgehog/intein (Hint) domain
CPF11_04945	SSF103473	MFS general substrate transporter
CPF11_04950	SSF51294	Hedgehog/intein (Hint) domain
CPF11_04965	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CPF11_04975	SSF47741	CO dehydrogenase ISP C-domain like
CPF11_04975	SSF54292	2Fe-2S ferredoxin-like
CPF11_04980	SSF56003	Molybdenum cofactor-binding domain
CPF11_04985	SSF46626	Cytochrome c
CPF11_04990	SSF53720	ALDH-like
CPF11_04995	SSF46785	"Winged helix" DNA-binding domain
CPF11_04995	SSF53850	Periplasmic binding protein-like II
CPF11_05000	SSF51430	NAD(P)-linked oxidoreductase
CPF11_05010	SSF52833	Thioredoxin-like
CPF11_05020	SSF46626	Cytochrome c
CPF11_05025	SSF57561	Methylamine dehydrogenase, L chain
CPF11_05030	SSF52833	Thioredoxin-like
CPF11_05040	SSF50969	YVTN repeat-like/Quinoprotein amine dehydrogenase
CPF11_05045	SSF46785	"Winged helix" DNA-binding domain
CPF11_05045	SSF53850	Periplasmic binding protein-like II
CPF11_05055	SSF53448	Nucleotide-diphospho-sugar transferases
CPF11_05075	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
CPF11_05075	SSF51735	NAD(P)-binding Rossmann-fold domains
CPF11_05080	SSF47240	Ferritin-like
CPF11_05085	SSF51294	Hedgehog/intein (Hint) domain
CPF11_05090	SSF53383	PLP-dependent transferases
CPF11_05105	SSF51316	Mss4-like
CPF11_05110	SSF48173	Cryptochrome/photolyase FAD-binding domain
CPF11_05110	SSF52425	Cryptochrome/photolyase, N-terminal domain
CPF11_05115	SSF51294	Hedgehog/intein (Hint) domain
CPF11_05120	SSF46894	C-terminal effector domain of the bipartite response regulators
CPF11_05130	SSF53697	SIS domain
CPF11_05135	SSF53067	Actin-like ATPase domain
CPF11_05140	SSF51445	(Trans)glycosidases
CPF11_05140	SSF55545	beta-N-acetylhexosaminidase-like domain
CPF11_05145	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_05150	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
CPF11_05155	SSF53807	"Helical backbone" metal receptor
CPF11_05160	SSF56935	Porins
CPF11_05170	SSF46785	"Winged helix" DNA-binding domain
CPF11_05170	SSF53850	Periplasmic binding protein-like II
CPF11_05175	SSF51735	NAD(P)-binding Rossmann-fold domains
CPF11_05180	SSF56935	Porins
CPF11_05200	SSF140804	YidB-like
CPF11_05210	SSF53254	Phosphoglycerate mutase-like
CPF11_05215	SSF53271	PRTase-like
CPF11_05225	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_05245	SSF51735	NAD(P)-binding Rossmann-fold domains
CPF11_05255	SSF54211	Ribosomal protein S5 domain 2-like
CPF11_05255	SSF55060	GHMP Kinase, C-terminal domain
CPF11_05260	SSF48452	TPR-like
CPF11_05265	SSF52141	Uracil-DNA glycosylase-like
CPF11_05270	SSF48435	Bacterial muramidases
CPF11_05270	SSF53955	Lysozyme-like
CPF11_05275	SSF54631	CBS-domain pair
CPF11_05275	SSF56176	FAD-binding/transporter-associated domain-like
CPF11_05280	SSF102114	Radical SAM enzymes
CPF11_05295	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
CPF11_05295	SSF52922	TK C-terminal domain-like
CPF11_05305	SSF53448	Nucleotide-diphospho-sugar transferases
CPF11_05310	SSF102114	Radical SAM enzymes
CPF11_05315	SSF88713	Glycoside hydrolase/deacetylase
CPF11_05330	SSF51283	dUTPase-like
CPF11_05335	SSF55205	EPT/RTPC-like
CPF11_05345	SSF100950	NagB/RpiA/CoA transferase-like
CPF11_05350	SSF100950	NagB/RpiA/CoA transferase-like
CPF11_05350	SSF46548	alpha-helical ferredoxin
CPF11_05360	SSF52467	DHS-like NAD/FAD-binding domain
CPF11_05360	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
CPF11_05370	SSF52467	DHS-like NAD/FAD-binding domain
CPF11_05370	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
CPF11_05375	SSF117856	AF0104/ALDC/Ptd012-like
CPF11_05380	SSF46785	"Winged helix" DNA-binding domain
CPF11_05380	SSF53850	Periplasmic binding protein-like II
CPF11_05385	SSF52821	Rhodanese/Cell cycle control phosphatase
CPF11_05390	SSF75217	alpha/beta knot
CPF11_05395	SSF81301	Nucleotidyltransferase
CPF11_05400	SSF52374	Nucleotidylyl transferase
CPF11_05405	SSF53720	ALDH-like
CPF11_05410	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_05410	SSF81271	TGS-like
CPF11_05415	SSF53178	Peptidyl-tRNA hydrolase-like
CPF11_05420	SSF50715	Ribosomal protein L25-like
CPF11_05425	SSF53383	PLP-dependent transferases
CPF11_05430	SSF50249	Nucleic acid-binding proteins
CPF11_05430	SSF55261	GAD domain-like
CPF11_05430	SSF55681	Class II aaRS and biotin synthetases
CPF11_05445	SSF144052	Thermophilic metalloprotease-like
CPF11_05460	SSF103473	MFS general substrate transporter
CPF11_05465	SSF56801	Acetyl-CoA synthetase-like
CPF11_05470	SSF51621	Phosphoenolpyruvate/pyruvate domain
CPF11_05475	SSF48256	Citrate synthase
CPF11_05480	SSF103378	2-methylcitrate dehydratase PrpD
CPF11_05485	SSF47413	lambda repressor-like DNA-binding domains
CPF11_05500	SSF54060	His-Me finger endonucleases
CPF11_05570	SSF103473	MFS general substrate transporter
CPF11_05575	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CPF11_05580	SSF56801	Acetyl-CoA synthetase-like
CPF11_05585	SSF47336	ACP-like
CPF11_05585	SSF50129	GroES-like
CPF11_05585	SSF51735	NAD(P)-binding Rossmann-fold domains
CPF11_05595	SSF52151	FabD/lysophospholipase-like
CPF11_05595	SSF53901	Thiolase-like
CPF11_05595	SSF55048	Probable ACP-binding domain of malonyl-CoA ACP transacylase
CPF11_05600	SSF56801	Acetyl-CoA synthetase-like
CPF11_05605	SSF51294	Hedgehog/intein (Hint) domain
CPF11_05610	SSF51294	Hedgehog/intein (Hint) domain
CPF11_05615	SSF89447	AbrB/MazE/MraZ-like
CPF11_05620	SSF140931	Fic-like
CPF11_05625	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CPF11_05630	SSF116734	DNA methylase specificity domain
CPF11_05640	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_05650	SSF53187	Zn-dependent exopeptidases
CPF11_05655	SSF110942	HSP90 C-terminal domain
CPF11_05655	SSF54211	Ribosomal protein S5 domain 2-like
CPF11_05655	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CPF11_05665	SSF101386	all-alpha NTP pyrophosphatases
CPF11_05670	SSF51735	NAD(P)-binding Rossmann-fold domains
CPF11_05670	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
CPF11_05675	SSF51735	NAD(P)-binding Rossmann-fold domains
CPF11_05690	SSF111369	HlyD-like secretion proteins
CPF11_05695	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_05695	SSF90123	ABC transporter transmembrane region
CPF11_05700	SSF50129	GroES-like
CPF11_05700	SSF51735	NAD(P)-binding Rossmann-fold domains
CPF11_05705	SSF54631	CBS-domain pair
CPF11_05705	SSF56176	FAD-binding/transporter-associated domain-like
CPF11_05710	SSF53254	Phosphoglycerate mutase-like
CPF11_05715	SSF53448	Nucleotide-diphospho-sugar transferases
CPF11_05730	SSF53850	Periplasmic binding protein-like II
CPF11_05735	SSF47384	Homodimeric domain of signal transducing histidine kinase
CPF11_05735	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CPF11_05740	SSF46894	C-terminal effector domain of the bipartite response regulators
CPF11_05740	SSF52172	CheY-like
CPF11_05745	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_05750	SSF55681	Class II aaRS and biotin synthetases
CPF11_05755	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_05760	SSF160996	HI0933 insert domain-like
CPF11_05760	SSF51905	FAD/NAD(P)-binding domain
CPF11_05765	SSF51366	Ribulose-phoshate binding barrel
CPF11_05770	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
CPF11_05775	SSF56349	DNA breaking-rejoining enzymes
CPF11_05795	SSF143865	CorA soluble domain-like
CPF11_05795	SSF144083	Magnesium transport protein CorA, transmembrane region
CPF11_05805	SSF50249	Nucleic acid-binding proteins
CPF11_05805	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_05805	SSF68912	Rho N-terminal domain-like
CPF11_05810	SSF64307	SirA-like
CPF11_05815	SSF46785	"Winged helix" DNA-binding domain
CPF11_05820	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CPF11_05825	SSF56317	Carbon-nitrogen hydrolase
CPF11_05830	SSF47413	lambda repressor-like DNA-binding domains
CPF11_05840	SSF55681	Class II aaRS and biotin synthetases
CPF11_05845	SSF109604	HD-domain/PDEase-like
CPF11_05850	SSF103481	Multidrug resistance efflux transporter EmrE
CPF11_05865	SSF52335	Methylglyoxal synthase-like
CPF11_05865	SSF53927	Cytidine deaminase-like
CPF11_05870	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CPF11_05875	SSF55973	S-adenosylmethionine synthetase
CPF11_05885	SSF51735	NAD(P)-binding Rossmann-fold domains
CPF11_05885	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
CPF11_05890	SSF46565	Chaperone J-domain
CPF11_05890	SSF49493	HSP40/DnaJ peptide-binding domain
CPF11_05890	SSF57938	DnaJ/Hsp40 cysteine-rich domain
CPF11_05895	SSF100920	Heat shock protein 70kD (HSP70), peptide-binding domain
CPF11_05895	SSF53067	Actin-like ATPase domain
CPF11_05900	SSF51064	Head domain of nucleotide exchange factor GrpE
CPF11_05900	SSF58014	Coiled-coil domain of nucleotide exchange factor GrpE
CPF11_05905	SSF46894	C-terminal effector domain of the bipartite response regulators
CPF11_05905	SSF52172	CheY-like
CPF11_05910	SSF47384	Homodimeric domain of signal transducing histidine kinase
CPF11_05910	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CPF11_05915	SSF55298	YjgF-like
CPF11_05920	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_05925	SSF143456	VC0467-like
CPF11_05930	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_05940	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_05940	SSF81923	Double Clp-N motif
CPF11_05945	SSF54736	ClpS-like
CPF11_05950	SSF56601	beta-lactamase/transpeptidase-like
CPF11_05955	SSF55920	Creatinase/aminopeptidase
CPF11_05960	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
CPF11_05965	SSF102114	Radical SAM enzymes
CPF11_05970	SSF55681	Class II aaRS and biotin synthetases
CPF11_05980	SSF82153	FAS1 domain
CPF11_05990	SSF51391	Thiamin phosphate synthase
CPF11_05995	SSF51569	Aldolase
CPF11_06020	SSF100950	NagB/RpiA/CoA transferase-like
CPF11_06025	SSF56300	Metallo-dependent phosphatases
CPF11_06030	SSF55811	Nudix
CPF11_06035	SSF56784	HAD-like
CPF11_06040	SSF51395	FMN-linked oxidoreductases
CPF11_06050	SSF100879	Lesion bypass DNA polymerase (Y-family), little finger domain
CPF11_06050	SSF56672	DNA/RNA polymerases
CPF11_06065	SSF53448	Nucleotide-diphospho-sugar transferases
CPF11_06075	SSF56784	HAD-like
CPF11_06085	SSF63411	LuxS/MPP-like metallohydrolase
CPF11_06095	SSF46600	C-terminal UvrC-binding domain of UvrB
CPF11_06095	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_06105	SSF51430	NAD(P)-linked oxidoreductase
CPF11_06110	SSF55811	Nudix
CPF11_06115	SSF53448	Nucleotide-diphospho-sugar transferases
CPF11_06115	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CPF11_06120	SSF158442	DsbB-like
CPF11_06125	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CPF11_06130	SSF56784	HAD-like
CPF11_06160	SSF55298	YjgF-like
CPF11_06165	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CPF11_06170	SSF51735	NAD(P)-binding Rossmann-fold domains
CPF11_06170	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
CPF11_06175	SSF51730	FAD-linked oxidoreductase
CPF11_06185	SSF49777	PEBP-like
CPF11_06195	SSF111337	QueA-like
CPF11_06200	SSF51713	tRNA-guanine transglycosylase
CPF11_06205	SSF46548	alpha-helical ferredoxin
CPF11_06215	SSF158682	TerB-like
CPF11_06215	SSF46565	Chaperone J-domain
CPF11_06230	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CPF11_06235	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_06245	SSF50324	Inorganic pyrophosphatase
CPF11_06250	SSF53213	LigB-like
CPF11_06255	SSF101874	YceI-like
CPF11_06265	SSF69118	AhpD-like
CPF11_06270	SSF52833	Thioredoxin-like
CPF11_06275	SSF46785	"Winged helix" DNA-binding domain
CPF11_06275	SSF53850	Periplasmic binding protein-like II
CPF11_06280	SSF57840	Ribosomal protein L36
CPF11_06285	SSF48452	TPR-like
CPF11_06290	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
CPF11_06290	SSF51735	NAD(P)-binding Rossmann-fold domains
CPF11_06300	SSF51735	NAD(P)-binding Rossmann-fold domains
CPF11_06305	SSF53448	Nucleotide-diphospho-sugar transferases
CPF11_06310	SSF48576	Terpenoid synthases
CPF11_06315	SSF48576	Terpenoid synthases
CPF11_06320	SSF51905	FAD/NAD(P)-binding domain
CPF11_06325	SSF48239	Terpenoid cyclases/Protein prenyltransferases
CPF11_06330	SSF53167	Purine and uridine phosphorylases
CPF11_06340	SSF56954	Outer membrane efflux proteins (OEP)
CPF11_06345	SSF111369	HlyD-like secretion proteins
CPF11_06355	SSF46785	"Winged helix" DNA-binding domain
CPF11_06370	SSF50331	MOP-like
CPF11_06370	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_06375	SSF53850	Periplasmic binding protein-like II
CPF11_06380	SSF161098	MetI-like
CPF11_06400	SSF56349	DNA breaking-rejoining enzymes
CPF11_06435	SSF46689	Homeodomain-like
CPF11_06435	SSF53041	Resolvase-like
CPF11_06455	SSF53167	Purine and uridine phosphorylases
CPF11_06460	SSF56349	DNA breaking-rejoining enzymes
CPF11_06480	SSF56349	DNA breaking-rejoining enzymes
CPF11_06510	SSF46689	Homeodomain-like
CPF11_06510	SSF53041	Resolvase-like
CPF11_06550	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_06555	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_06570	SSF53822	Periplasmic binding protein-like I
CPF11_06575	SSF47384	Homodimeric domain of signal transducing histidine kinase
CPF11_06575	SSF52172	CheY-like
CPF11_06575	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CPF11_06580	SSF46894	C-terminal effector domain of the bipartite response regulators
CPF11_06580	SSF52172	CheY-like
CPF11_06585	SSF56317	Carbon-nitrogen hydrolase
CPF11_06605	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CPF11_06615	SSF56935	Porins
CPF11_06625	SSF50249	Nucleic acid-binding proteins
CPF11_06630	SSF56954	Outer membrane efflux proteins (OEP)
CPF11_06635	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
CPF11_06635	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
CPF11_06635	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
CPF11_06645	SSF111369	HlyD-like secretion proteins
CPF11_06665	SSF46689	Homeodomain-like
CPF11_06670	SSF53850	Periplasmic binding protein-like II
CPF11_06685	SSF161098	MetI-like
CPF11_06690	SSF161098	MetI-like
CPF11_06695	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_06715	SSF53613	Ribokinase-like
CPF11_06720	SSF47819	HRDC-like
CPF11_06720	SSF53098	Ribonuclease H-like
CPF11_06725	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
CPF11_06730	SSF51344	Epsilon subunit of F1F0-ATP synthase N-terminal domain
CPF11_06735	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
CPF11_06735	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
CPF11_06735	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_06740	SSF52943	ATP synthase (F1-ATPase), gamma subunit
CPF11_06745	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
CPF11_06745	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
CPF11_06745	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_06750	SSF47928	N-terminal domain of the delta subunit of the F1F0-ATP synthase
CPF11_06775	SSF50104	Translation proteins SH3-like domain
CPF11_06775	SSF82679	N-utilization substance G protein NusG, N-terminal domain
CPF11_06780	SSF51735	NAD(P)-binding Rossmann-fold domains
CPF11_06780	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
CPF11_06785	SSF53474	alpha/beta-Hydrolases
CPF11_06785	SSF69322	Tricorn protease domain 2
CPF11_06795	SSF51735	NAD(P)-binding Rossmann-fold domains
CPF11_06800	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_06810	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
CPF11_06810	SSF63380	Riboflavin synthase domain-like
CPF11_06815	SSF51905	FAD/NAD(P)-binding domain
CPF11_06815	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
CPF11_06820	SSF51338	Composite domain of metallo-dependent hydrolases
CPF11_06820	SSF51556	Metallo-dependent hydrolases
CPF11_06830	SSF53383	PLP-dependent transferases
CPF11_06835	SSF51735	NAD(P)-binding Rossmann-fold domains
CPF11_06850	SSF46785	"Winged helix" DNA-binding domain
CPF11_06855	SSF53187	Zn-dependent exopeptidases
CPF11_06860	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_06865	SSF54862	4Fe-4S ferredoxins
CPF11_06875	SSF81452	Cytochrome c oxidase subunit III-like
CPF11_06880	SSF81442	Cytochrome c oxidase subunit I-like
CPF11_06885	SSF49503	Cupredoxins
CPF11_06885	SSF81464	Cytochrome c oxidase subunit II-like, transmembrane region
CPF11_06905	SSF46626	Cytochrome c
CPF11_06905	SSF50998	Quinoprotein alcohol dehydrogenase-like
CPF11_06910	SSF46626	Cytochrome c
CPF11_06915	SSF52141	Uracil-DNA glycosylase-like
CPF11_06920	SSF82544	GckA/TtuD-like
CPF11_06930	SSF53271	PRTase-like
CPF11_06935	SSF47384	Homodimeric domain of signal transducing histidine kinase
CPF11_06935	SSF52172	CheY-like
CPF11_06935	SSF55785	PYP-like sensor domain (PAS domain)
CPF11_06935	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CPF11_06940	SSF103473	MFS general substrate transporter
CPF11_06955	SSF110921	2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
CPF11_06955	SSF51569	Aldolase
CPF11_06960	SSF53067	Actin-like ATPase domain
CPF11_06975	SSF56519	Penicillin binding protein dimerisation domain
CPF11_06975	SSF56601	beta-lactamase/transpeptidase-like
CPF11_06985	SSF48452	TPR-like
CPF11_07005	SSF74653	TolA/TonB C-terminal domain
CPF11_07015	SSF53955	Lysozyme-like
CPF11_07015	SSF56601	beta-lactamase/transpeptidase-like
CPF11_07020	SSF46785	"Winged helix" DNA-binding domain
CPF11_07020	SSF55781	GAF domain-like
CPF11_07025	SSF54211	Ribosomal protein S5 domain 2-like
CPF11_07025	SSF55666	Ribonuclease PH domain 2-like
CPF11_07030	SSF52972	ITPase-like
CPF11_07035	SSF63829	Calcium-dependent phosphotriesterase
CPF11_07045	SSF50249	Nucleic acid-binding proteins
CPF11_07050	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_07055	SSF55205	EPT/RTPC-like
CPF11_07065	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
CPF11_07070	SSF51735	NAD(P)-binding Rossmann-fold domains
CPF11_07075	SSF111304	Recombination protein RecR
CPF11_07080	SSF82607	YbaB-like
CPF11_07085	SSF48019	post-AAA+ oligomerization domain-like
CPF11_07085	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_07100	SSF103473	MFS general substrate transporter
CPF11_07105	SSF51338	Composite domain of metallo-dependent hydrolases
CPF11_07105	SSF51556	Metallo-dependent hydrolases
CPF11_07110	SSF53448	Nucleotide-diphospho-sugar transferases
CPF11_07115	SSF74650	Galactose mutarotase-like
CPF11_07115	SSF81296	E set domains
CPF11_07120	SSF46785	"Winged helix" DNA-binding domain
CPF11_07125	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CPF11_07130	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_07130	SSF54752	RecA protein, C-terminal domain
CPF11_07135	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
CPF11_07140	SSF52833	Thioredoxin-like
CPF11_07145	SSF53383	PLP-dependent transferases
CPF11_07155	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
CPF11_07155	SSF52922	TK C-terminal domain-like
CPF11_07160	SSF51735	NAD(P)-binding Rossmann-fold domains
CPF11_07160	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
CPF11_07165	SSF53748	Phosphoglycerate kinase
CPF11_07170	SSF103481	Multidrug resistance efflux transporter EmrE
CPF11_07175	SSF52799	(Phosphotyrosine protein) phosphatases II
CPF11_07180	SSF46548	alpha-helical ferredoxin
CPF11_07180	SSF54292	2Fe-2S ferredoxin-like
CPF11_07185	SSF46977	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
CPF11_07185	SSF51905	FAD/NAD(P)-binding domain
CPF11_07185	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
CPF11_07190	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
CPF11_07195	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
CPF11_07200	SSF51735	NAD(P)-binding Rossmann-fold domains
CPF11_07200	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
CPF11_07205	SSF51735	NAD(P)-binding Rossmann-fold domains
CPF11_07205	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
CPF11_07215	SSF52467	DHS-like NAD/FAD-binding domain
CPF11_07220	SSF50129	GroES-like
CPF11_07220	SSF51735	NAD(P)-binding Rossmann-fold domains
CPF11_07225	SSF53720	ALDH-like
CPF11_07230	SSF53383	PLP-dependent transferases
CPF11_07250	SSF51246	Rudiment single hybrid motif
CPF11_07250	SSF52440	PreATP-grasp domain
CPF11_07250	SSF56059	Glutathione synthetase ATP-binding domain-like
CPF11_07255	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CPF11_07260	SSF53067	Actin-like ATPase domain
CPF11_07265	SSF55469	FMN-dependent nitroreductase-like
CPF11_07270	SSF110836	Hypothetical protein SAV1430
CPF11_07270	SSF117916	Fe-S cluster assembly (FSCA) domain-like
CPF11_07275	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_07280	SSF50974	Nitrous oxide reductase, N-terminal domain
CPF11_07285	SSF102215	Creatininase
CPF11_07290	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_07295	SSF48452	TPR-like
CPF11_07295	SSF52833	Thioredoxin-like
CPF11_07300	SSF88697	PUA domain-like
CPF11_07305	SSF158997	Trm112p-like
CPF11_07315	SSF103473	MFS general substrate transporter
CPF11_07330	SSF53738	Phosphoglucomutase, first 3 domains
CPF11_07330	SSF55957	Phosphoglucomutase, C-terminal domain
CPF11_07340	SSF52972	ITPase-like
CPF11_07345	SSF51726	UROD/MetE-like
CPF11_07350	SSF56784	HAD-like
CPF11_07360	SSF55811	Nudix
CPF11_07365	SSF103473	MFS general substrate transporter
CPF11_07370	SSF102405	MCP/YpsA-like
CPF11_07390	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
CPF11_07390	SSF53155	Methylated DNA-protein cysteine methyltransferase domain
CPF11_07395	SSF116878	TrmE connector domain
CPF11_07395	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_07400	SSF51905	FAD/NAD(P)-binding domain
CPF11_07405	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CPF11_07410	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_07415	SSF110849	ParB/Sulfiredoxin
CPF11_07425	SSF46689	Homeodomain-like
CPF11_07425	SSF53041	Resolvase-like
CPF11_07450	SSF46955	Putative DNA-binding domain
CPF11_07475	SSF47413	lambda repressor-like DNA-binding domains
CPF11_07485	SSF56349	DNA breaking-rejoining enzymes
CPF11_07495	SSF47616	GST C-terminal domain-like
CPF11_07495	SSF52833	Thioredoxin-like
CPF11_07510	SSF51905	FAD/NAD(P)-binding domain
CPF11_07515	SSF55469	FMN-dependent nitroreductase-like
CPF11_07520	SSF54197	HIT-like
CPF11_07525	SSF101386	all-alpha NTP pyrophosphatases
CPF11_07530	SSF51366	Ribulose-phoshate binding barrel
CPF11_07535	SSF51366	Ribulose-phoshate binding barrel
CPF11_07535	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CPF11_07540	SSF52317	Class I glutamine amidotransferase-like
CPF11_07545	SSF54211	Ribosomal protein S5 domain 2-like
CPF11_07550	SSF52402	Adenine nucleotide alpha hydrolases-like
CPF11_07550	SSF56317	Carbon-nitrogen hydrolase
CPF11_07560	SSF53448	Nucleotide-diphospho-sugar transferases
CPF11_07560	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CPF11_07565	SSF51120	beta-Roll
CPF11_07570	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CPF11_07580	SSF47729	IHF-like DNA-binding proteins
CPF11_07585	SSF103473	MFS general substrate transporter
CPF11_07600	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
CPF11_07600	SSF51735	NAD(P)-binding Rossmann-fold domains
CPF11_07615	SSF46565	Chaperone J-domain
CPF11_07615	SSF49493	HSP40/DnaJ peptide-binding domain
CPF11_07640	SSF56266	DmpA/ArgJ-like
CPF11_07645	SSF109998	Triger factor/SurA peptide-binding domain-like
CPF11_07645	SSF54534	FKBP-like
CPF11_07650	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_07650	SSF81767	Pre-protein crosslinking domain of SecA
CPF11_07650	SSF81886	Helical scaffold and wing domains of SecA
CPF11_07655	SSF75625	YebC-like
CPF11_07660	SSF53098	Ribonuclease H-like
CPF11_07665	SSF46929	DNA helicase RuvA subunit, C-terminal domain
CPF11_07665	SSF47781	RuvA domain 2-like
CPF11_07665	SSF50249	Nucleic acid-binding proteins
CPF11_07670	SSF46785	"Winged helix" DNA-binding domain
CPF11_07670	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_07675	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
CPF11_07695	SSF52964	TolB, N-terminal domain
CPF11_07695	SSF69304	Tricorn protease N-terminal domain
CPF11_07700	SSF103088	OmpA-like
CPF11_07705	SSF48452	TPR-like
CPF11_07710	SSF52402	Adenine nucleotide alpha hydrolases-like
CPF11_07715	SSF140990	FtsH protease domain-like
CPF11_07715	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_07720	SSF51717	Dihydropteroate synthetase-like
CPF11_07725	SSF53738	Phosphoglucomutase, first 3 domains
CPF11_07725	SSF55957	Phosphoglucomutase, C-terminal domain
CPF11_07730	SSF52172	CheY-like
CPF11_07735	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_07740	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_07745	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_07750	SSF52833	Thioredoxin-like
CPF11_07755	SSF52096	ClpP/crotonase
CPF11_07760	SSF53244	MurD-like peptide ligases, peptide-binding domain
CPF11_07760	SSF53623	MurD-like peptide ligases, catalytic domain
CPF11_07770	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
CPF11_07770	SSF52374	Nucleotidylyl transferase
CPF11_07775	SSF75217	alpha/beta knot
CPF11_07780	SSF53474	alpha/beta-Hydrolases
CPF11_07785	SSF53383	PLP-dependent transferases
CPF11_07790	SSF53383	PLP-dependent transferases
CPF11_07795	SSF54292	2Fe-2S ferredoxin-like
CPF11_07800	SSF52402	Adenine nucleotide alpha hydrolases-like
CPF11_07805	SSF47616	GST C-terminal domain-like
CPF11_07805	SSF52833	Thioredoxin-like
CPF11_07810	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CPF11_07815	SSF55120	Pseudouridine synthase
CPF11_07820	SSF46785	"Winged helix" DNA-binding domain
CPF11_07820	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_07825	SSF53448	Nucleotide-diphospho-sugar transferases
CPF11_07830	SSF51735	NAD(P)-binding Rossmann-fold domains
CPF11_07835	SSF51182	RmlC-like cupins
CPF11_07840	SSF53448	Nucleotide-diphospho-sugar transferases
CPF11_07845	SSF51735	NAD(P)-binding Rossmann-fold domains
CPF11_07850	SSF53383	PLP-dependent transferases
CPF11_07855	SSF53254	Phosphoglycerate mutase-like
CPF11_07860	SSF111283	Putative modulator of DNA gyrase, PmbA/TldD
CPF11_07865	SSF52374	Nucleotidylyl transferase
CPF11_07865	SSF55174	Alpha-L RNA-binding motif
CPF11_07875	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CPF11_07885	SSF109635	DnaK suppressor protein DksA, alpha-hairpin domain
CPF11_07885	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
CPF11_07895	SSF50249	Nucleic acid-binding proteins
CPF11_07900	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CPF11_07905	SSF55120	Pseudouridine synthase
CPF11_07905	SSF55174	Alpha-L RNA-binding motif
CPF11_07910	SSF52317	Class I glutamine amidotransferase-like
CPF11_07915	SSF53927	Cytidine deaminase-like
CPF11_07920	SSF50156	PDZ domain-like
CPF11_07920	SSF50494	Trypsin-like serine proteases
CPF11_07925	SSF46785	"Winged helix" DNA-binding domain
CPF11_07925	SSF51206	cAMP-binding domain-like
CPF11_07930	SSF56925	OMPA-like
CPF11_07935	SSF102114	Radical SAM enzymes
CPF11_07945	SSF51905	FAD/NAD(P)-binding domain
CPF11_07945	SSF54373	FAD-linked reductases, C-terminal domain
CPF11_07945	SSF54862	4Fe-4S ferredoxins
CPF11_07950	SSF52402	Adenine nucleotide alpha hydrolases-like
CPF11_07955	SSF52402	Adenine nucleotide alpha hydrolases-like
CPF11_07955	SSF52467	DHS-like NAD/FAD-binding domain
CPF11_07960	SSF46689	Homeodomain-like
CPF11_07960	SSF48498	Tetracyclin repressor-like, C-terminal domain
CPF11_07965	SSF56954	Outer membrane efflux proteins (OEP)
CPF11_08000	SSF48019	post-AAA+ oligomerization domain-like
CPF11_08000	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_08010	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
CPF11_08010	SSF50677	ValRS/IleRS/LeuRS editing domain
CPF11_08010	SSF52374	Nucleotidylyl transferase
CPF11_08020	SSF53955	Lysozyme-like
CPF11_08035	SSF48150	DNA-glycosylase
CPF11_08035	SSF55811	Nudix
CPF11_08040	SSF53800	Chelatase
CPF11_08045	SSF48150	DNA-glycosylase
CPF11_08050	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_08050	SSF90123	ABC transporter transmembrane region
CPF11_08060	SSF55931	Glutamine synthetase/guanido kinase
CPF11_08060	SSF89095	GatB/YqeY motif
CPF11_08065	SSF75304	Amidase signature (AS) enzymes
CPF11_08070	SSF141000	Glu-tRNAGln amidotransferase C subunit
CPF11_08075	SSF53098	Ribonuclease H-like
CPF11_08080	SSF118375	Synuclein
CPF11_08085	SSF53383	PLP-dependent transferases
CPF11_08090	SSF46785	"Winged helix" DNA-binding domain
CPF11_08090	SSF53850	Periplasmic binding protein-like II
CPF11_08125	SSF49503	Cupredoxins
CPF11_08140	SSF103473	MFS general substrate transporter
CPF11_08145	SSF51246	Rudiment single hybrid motif
CPF11_08145	SSF52440	PreATP-grasp domain
CPF11_08145	SSF56059	Glutathione synthetase ATP-binding domain-like
CPF11_08150	SSF51230	Single hybrid motif
CPF11_08155	SSF52304	Type II 3-dehydroquinate dehydratase
CPF11_08160	SSF50685	Barwin-like endoglucanases
CPF11_08170	SSF50621	Alanine racemase C-terminal domain-like
CPF11_08170	SSF51419	PLP-binding barrel
CPF11_08185	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_08190	SSF52016	LeuD/IlvD-like
CPF11_08190	SSF53732	Aconitase iron-sulfur domain
CPF11_08195	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_08200	SSF161098	MetI-like
CPF11_08200	SSF53850	Periplasmic binding protein-like II
CPF11_08205	SSF46785	"Winged helix" DNA-binding domain
CPF11_08205	SSF53850	Periplasmic binding protein-like II
CPF11_08215	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_08225	SSF74942	YhbC-like, C-terminal domain
CPF11_08225	SSF75420	YhbC-like, N-terminal domain
CPF11_08230	SSF47794	Rad51 N-terminal domain-like
CPF11_08230	SSF50249	Nucleic acid-binding proteins
CPF11_08230	SSF54814	Prokaryotic type KH domain (KH-domain type II)
CPF11_08230	SSF69705	Transcription factor NusA, N-terminal domain
CPF11_08235	SSF55315	L30e-like
CPF11_08235	SSF64376	YlxR-like
CPF11_08240	SSF50447	Translation proteins
CPF11_08240	SSF52156	Initiation factor IF2/eIF5b, domain 3
CPF11_08240	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_08245	SSF89919	Ribosome-binding factor A, RbfA
CPF11_08250	SSF46785	"Winged helix" DNA-binding domain
CPF11_08250	SSF54909	Dimeric alpha+beta barrel
CPF11_08255	SSF50621	Alanine racemase C-terminal domain-like
CPF11_08255	SSF51419	PLP-binding barrel
CPF11_08260	SSF51905	FAD/NAD(P)-binding domain
CPF11_08260	SSF54373	FAD-linked reductases, C-terminal domain
CPF11_08270	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
CPF11_08275	SSF117457	FumA C-terminal domain-like
CPF11_08280	SSF101738	SspB-like
CPF11_08290	SSF69796	Thymidylate synthase-complementing protein Thy1
CPF11_08305	SSF117916	Fe-S cluster assembly (FSCA) domain-like
CPF11_08305	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_08315	SSF52266	SGNH hydrolase
CPF11_08320	SSF50156	PDZ domain-like
CPF11_08320	SSF50494	Trypsin-like serine proteases
CPF11_08330	SSF50129	GroES-like
CPF11_08330	SSF51735	NAD(P)-binding Rossmann-fold domains
CPF11_08340	SSF143975	IlvD/EDD N-terminal domain-like
CPF11_08340	SSF52016	LeuD/IlvD-like
CPF11_08345	SSF161098	MetI-like
CPF11_08350	SSF161098	MetI-like
CPF11_08355	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_08360	SSF109755	PhoU-like
CPF11_08365	SSF51735	NAD(P)-binding Rossmann-fold domains
CPF11_08375	SSF52161	Ribosomal protein L13
CPF11_08380	SSF54211	Ribosomal protein S5 domain 2-like
CPF11_08385	SSF53474	alpha/beta-Hydrolases
CPF11_08395	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_08405	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
CPF11_08410	SSF54506	Diaminopimelate epimerase-like
CPF11_08415	SSF102114	Radical SAM enzymes
CPF11_08420	SSF47364	Domain of the SRP/SRP receptor G-proteins
CPF11_08420	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_08430	SSF81336	F1F0 ATP synthase subunit A
CPF11_08435	SSF81333	F1F0 ATP synthase subunit C
CPF11_08450	SSF53448	Nucleotide-diphospho-sugar transferases
CPF11_08475	SSF159594	XCC0632-like
CPF11_08480	SSF53271	PRTase-like
CPF11_08480	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
CPF11_08495	SSF47644	Methionine synthase domain
CPF11_08495	SSF51717	Dihydropteroate synthetase-like
CPF11_08495	SSF52242	Cobalamin (vitamin B12)-binding domain
CPF11_08495	SSF56507	Methionine synthase activation domain-like
CPF11_08495	SSF82282	Homocysteine S-methyltransferase
CPF11_08505	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_08505	SSF90123	ABC transporter transmembrane region
CPF11_08510	SSF111369	HlyD-like secretion proteins
CPF11_08515	SSF81901	HCP-like
CPF11_08520	SSF48452	TPR-like
CPF11_08520	SSF53448	Nucleotide-diphospho-sugar transferases
CPF11_08520	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CPF11_08530	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CPF11_08535	SSF159594	XCC0632-like
CPF11_08545	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_08555	SSF55120	Pseudouridine synthase
CPF11_08560	SSF47060	S15/NS1 RNA-binding domain
CPF11_08565	SSF50249	Nucleic acid-binding proteins
CPF11_08565	SSF54211	Ribosomal protein S5 domain 2-like
CPF11_08565	SSF54791	Eukaryotic type KH-domain (KH-domain type I)
CPF11_08565	SSF55666	Ribonuclease PH domain 2-like
CPF11_08570	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
CPF11_08580	SSF101904	GyrA/ParC C-terminal domain-like
CPF11_08580	SSF56719	Type II DNA topoisomerase
CPF11_08585	SSF52374	Nucleotidylyl transferase
CPF11_08590	SSF50891	Cyclophilin-like
CPF11_08600	SSF46785	"Winged helix" DNA-binding domain
CPF11_08600	SSF53850	Periplasmic binding protein-like II
CPF11_08605	SSF48452	TPR-like
CPF11_08610	SSF56276	S-adenosylmethionine decarboxylase
CPF11_08615	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CPF11_08620	SSF101790	Aminomethyltransferase beta-barrel domain
CPF11_08620	SSF103025	Folate-binding domain
CPF11_08625	SSF51230	Single hybrid motif
CPF11_08630	SSF53383	PLP-dependent transferases
CPF11_08635	SSF54001	Cysteine proteinases
CPF11_08640	SSF55298	YjgF-like
CPF11_08645	SSF53448	Nucleotide-diphospho-sugar transferases
CPF11_08660	SSF56281	Metallo-hydrolase/oxidoreductase
CPF11_08670	SSF51735	NAD(P)-binding Rossmann-fold domains
CPF11_08705	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
CPF11_08705	SSF88946	Sigma2 domain of RNA polymerase sigma factors
CPF11_08715	SSF56935	Porins
CPF11_08735	SSF46955	Putative DNA-binding domain
CPF11_08740	SSF56672	DNA/RNA polymerases
CPF11_08745	SSF56349	DNA breaking-rejoining enzymes
CPF11_08755	SSF46785	"Winged helix" DNA-binding domain
CPF11_08760	SSF51905	FAD/NAD(P)-binding domain
CPF11_08760	SSF54373	FAD-linked reductases, C-terminal domain
CPF11_08765	SSF47741	CO dehydrogenase ISP C-domain like
CPF11_08765	SSF54292	2Fe-2S ferredoxin-like
CPF11_08770	SSF46626	Cytochrome c
CPF11_08770	SSF54665	CO dehydrogenase molybdoprotein N-domain-like
CPF11_08770	SSF56003	Molybdenum cofactor-binding domain
CPF11_08775	SSF144052	Thermophilic metalloprotease-like
CPF11_08780	SSF52499	Isochorismatase-like hydrolases
CPF11_08785	SSF53474	alpha/beta-Hydrolases
CPF11_08795	SSF103473	MFS general substrate transporter
CPF11_08805	SSF46785	"Winged helix" DNA-binding domain
CPF11_08805	SSF53850	Periplasmic binding protein-like II
CPF11_08810	SSF103473	MFS general substrate transporter
CPF11_08815	SSF111369	HlyD-like secretion proteins
CPF11_08820	SSF56954	Outer membrane efflux proteins (OEP)
CPF11_08825	SSF51182	RmlC-like cupins
CPF11_08830	SSF52833	Thioredoxin-like
CPF11_08835	SSF52091	SpoIIaa-like
CPF11_08845	SSF56281	Metallo-hydrolase/oxidoreductase
CPF11_08850	SSF52833	Thioredoxin-like
CPF11_08855	SSF46785	"Winged helix" DNA-binding domain
CPF11_08860	SSF48150	DNA-glycosylase
CPF11_08865	SSF54197	HIT-like
CPF11_08870	SSF52833	Thioredoxin-like
CPF11_08875	SSF47240	Ferritin-like
CPF11_08885	SSF53474	alpha/beta-Hydrolases
CPF11_08890	SSF53254	Phosphoglycerate mutase-like
CPF11_08895	SSF52467	DHS-like NAD/FAD-binding domain
CPF11_08895	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
CPF11_08910	SSF54111	Urease, gamma-subunit
CPF11_08915	SSF51278	Urease, beta-subunit
CPF11_08920	SSF51338	Composite domain of metallo-dependent hydrolases
CPF11_08920	SSF51556	Metallo-dependent hydrolases
CPF11_08925	SSF69287	Urease metallochaperone UreE, N-terminal domain
CPF11_08925	SSF69737	Urease metallochaperone UreE, C-terminal domain
CPF11_08935	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_08940	SSF56935	Porins
CPF11_08950	SSF46894	C-terminal effector domain of the bipartite response regulators
CPF11_08950	SSF52172	CheY-like
CPF11_08955	SSF47384	Homodimeric domain of signal transducing histidine kinase
CPF11_08955	SSF52172	CheY-like
CPF11_08955	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CPF11_08960	SSF53822	Periplasmic binding protein-like I
CPF11_08965	SSF48371	ARM repeat
CPF11_08975	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_08980	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_08995	SSF103473	MFS general substrate transporter
CPF11_09000	SSF52768	Arginase/deacetylase
CPF11_09005	SSF46785	"Winged helix" DNA-binding domain
CPF11_09005	SSF53850	Periplasmic binding protein-like II
CPF11_09030	SSF102114	Radical SAM enzymes
CPF11_09040	SSF51419	PLP-binding barrel
CPF11_09045	SSF50129	GroES-like
CPF11_09045	SSF51735	NAD(P)-binding Rossmann-fold domains
CPF11_09050	SSF54631	CBS-domain pair
CPF11_09050	SSF81340	Clc chloride channel
CPF11_09055	SSF53807	"Helical backbone" metal receptor
CPF11_09070	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_09075	SSF100950	NagB/RpiA/CoA transferase-like
CPF11_09075	SSF75445	D-ribose-5-phosphate isomerase (RpiA), lid domain
CPF11_09080	SSF100950	NagB/RpiA/CoA transferase-like
CPF11_09085	SSF56784	HAD-like
CPF11_09090	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
CPF11_09090	SSF51735	NAD(P)-binding Rossmann-fold domains
CPF11_09095	SSF51569	Aldolase
CPF11_09095	SSF53697	SIS domain
CPF11_09100	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
CPF11_09100	SSF52922	TK C-terminal domain-like
CPF11_09105	SSF48403	Ankyrin repeat
CPF11_09110	SSF53383	PLP-dependent transferases
CPF11_09120	SSF143865	CorA soluble domain-like
CPF11_09120	SSF144083	Magnesium transport protein CorA, transmembrane region
CPF11_09125	SSF103481	Multidrug resistance efflux transporter EmrE
CPF11_09130	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_09140	SSF53955	Lysozyme-like
CPF11_09150	SSF64438	CNF1/YfiH-like putative cysteine hydrolases
CPF11_09155	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CPF11_09165	SSF51735	NAD(P)-binding Rossmann-fold domains
CPF11_09170	SSF54909	Dimeric alpha+beta barrel
CPF11_09180	SSF53955	Lysozyme-like
CPF11_09185	SSF103473	MFS general substrate transporter
CPF11_09190	SSF56349	DNA breaking-rejoining enzymes
CPF11_09210	SSF47413	lambda repressor-like DNA-binding domains
CPF11_09230	SSF46955	Putative DNA-binding domain
CPF11_09255	SSF46689	Homeodomain-like
CPF11_09255	SSF53041	Resolvase-like
CPF11_09270	SSF52317	Class I glutamine amidotransferase-like
CPF11_09270	SSF52402	Adenine nucleotide alpha hydrolases-like
CPF11_09270	SSF54810	GMP synthetase C-terminal dimerisation domain
CPF11_09275	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
CPF11_09285	SSF55826	YbaK/ProRS associated domain
CPF11_09290	SSF100950	NagB/RpiA/CoA transferase-like
CPF11_09305	SSF46785	"Winged helix" DNA-binding domain
CPF11_09310	SSF53807	"Helical backbone" metal receptor
CPF11_09315	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_09320	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
CPF11_09325	SSF50475	FMN-binding split barrel
CPF11_09330	SSF52096	ClpP/crotonase
CPF11_09345	SSF46785	"Winged helix" DNA-binding domain
CPF11_09350	SSF52833	Thioredoxin-like
CPF11_09355	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_09355	SSF90002	Hypothetical protein YjiA, C-terminal domain
CPF11_09365	SSF52317	Class I glutamine amidotransferase-like
CPF11_09365	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_09370	SSF53254	Phosphoglycerate mutase-like
CPF11_09375	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_09380	SSF52317	Class I glutamine amidotransferase-like
CPF11_09380	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_09385	SSF55469	FMN-dependent nitroreductase-like
CPF11_09395	SSF53383	PLP-dependent transferases
CPF11_09405	SSF52733	Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)
CPF11_09410	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_09415	SSF103473	MFS general substrate transporter
CPF11_09420	SSF53720	ALDH-like
CPF11_09425	SSF46626	Cytochrome c
CPF11_09430	SSF51905	FAD/NAD(P)-binding domain
CPF11_09430	SSF54373	FAD-linked reductases, C-terminal domain
CPF11_09450	SSF118215	Proton glutamate symport protein
CPF11_09455	SSF50022	ISP domain
CPF11_09455	SSF55961	Bet v1-like
CPF11_09460	SSF46785	"Winged helix" DNA-binding domain
CPF11_09460	SSF53850	Periplasmic binding protein-like II
CPF11_09465	SSF74653	TolA/TonB C-terminal domain
CPF11_09485	SSF46689	Homeodomain-like
CPF11_09485	SSF53041	Resolvase-like
CPF11_09490	SSF51294	Hedgehog/intein (Hint) domain
CPF11_09535	SSF56349	DNA breaking-rejoining enzymes
CPF11_09540	SSF89447	AbrB/MazE/MraZ-like
CPF11_09545	SSF50118	Cell growth inhibitor/plasmid maintenance toxic component
CPF11_09580	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_09585	SSF116734	DNA methylase specificity domain
CPF11_09590	SSF81301	Nucleotidyltransferase
CPF11_09595	SSF81593	Nucleotidyltransferase substrate binding subunit/domain
CPF11_09600	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CPF11_09620	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_09630	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CPF11_09635	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_09665	SSF109604	HD-domain/PDEase-like
CPF11_09670	SSF56672	DNA/RNA polymerases
CPF11_09675	SSF56672	DNA/RNA polymerases
CPF11_09680	SSF46955	Putative DNA-binding domain
CPF11_09685	SSF56349	DNA breaking-rejoining enzymes
CPF11_09695	SSF51735	NAD(P)-binding Rossmann-fold domains
CPF11_09695	SSF53790	Tetrapyrrole methylase
CPF11_09695	SSF75615	Siroheme synthase middle domains-like
CPF11_09700	SSF55103	FAD-linked oxidases, C-terminal domain
CPF11_09700	SSF56176	FAD-binding/transporter-associated domain-like
CPF11_09705	SSF53850	Periplasmic binding protein-like II
CPF11_09710	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_09715	SSF161098	MetI-like
CPF11_09720	SSF46458	Globin-like
CPF11_09720	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
CPF11_09720	SSF63380	Riboflavin synthase domain-like
CPF11_09725	SSF47413	lambda repressor-like DNA-binding domains
CPF11_09730	SSF56601	beta-lactamase/transpeptidase-like
CPF11_09735	SSF51197	Clavaminate synthase-like
CPF11_09760	SSF53067	Actin-like ATPase domain
CPF11_09770	SSF63892	Pyridoxine 5'-phosphate synthase
CPF11_09775	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
CPF11_09785	SSF54611	SecB-like
CPF11_09795	SSF51366	Ribulose-phoshate binding barrel
CPF11_09800	SSF51366	Ribulose-phoshate binding barrel
CPF11_09835	SSF54909	Dimeric alpha+beta barrel
CPF11_09860	SSF103473	MFS general substrate transporter
CPF11_09865	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
CPF11_09870	SSF52833	Thioredoxin-like
CPF11_09875	SSF47807	5' to 3' exonuclease, C-terminal subdomain
CPF11_09875	SSF53098	Ribonuclease H-like
CPF11_09875	SSF56672	DNA/RNA polymerases
CPF11_09875	SSF88723	PIN domain-like
CPF11_09880	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
CPF11_09890	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_09895	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
CPF11_09900	SSF55120	Pseudouridine synthase
CPF11_09900	SSF55174	Alpha-L RNA-binding motif
CPF11_09905	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
CPF11_09905	SSF88946	Sigma2 domain of RNA polymerase sigma factors
CPF11_09910	SSF64182	DHH phosphoesterases
CPF11_09915	SSF56655	Carbohydrate phosphatase
CPF11_09920	SSF51735	NAD(P)-binding Rossmann-fold domains
CPF11_09920	SSF55021	ACT-like
CPF11_09920	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
CPF11_09925	SSF53383	PLP-dependent transferases
CPF11_09935	SSF52096	ClpP/crotonase
CPF11_09940	SSF47240	Ferritin-like
CPF11_09945	SSF102114	Radical SAM enzymes
CPF11_09955	SSF48613	Heme oxygenase-like
CPF11_09960	SSF56281	Metallo-hydrolase/oxidoreductase
CPF11_09980	SSF53448	Nucleotide-diphospho-sugar transferases
CPF11_09985	SSF56219	DNase I-like
CPF11_09990	SSF89360	HesB-like domain
CPF11_09995	SSF109604	HD-domain/PDEase-like
CPF11_10000	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
CPF11_10000	SSF52374	Nucleotidylyl transferase
CPF11_10000	SSF55190	Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
CPF11_10005	SSF110997	Sporulation related repeat
CPF11_10015	SSF46785	"Winged helix" DNA-binding domain
CPF11_10030	SSF46589	tRNA-binding arm
CPF11_10030	SSF55681	Class II aaRS and biotin synthetases
CPF11_10035	SSF103481	Multidrug resistance efflux transporter EmrE
CPF11_10040	SSF52833	Thioredoxin-like
CPF11_10050	SSF53474	alpha/beta-Hydrolases
CPF11_10070	SSF46785	"Winged helix" DNA-binding domain
CPF11_10070	SSF53850	Periplasmic binding protein-like II
CPF11_10075	SSF55811	Nudix
CPF11_10115	SSF56935	Porins
CPF11_10130	SSF75304	Amidase signature (AS) enzymes
CPF11_10140	SSF46785	"Winged helix" DNA-binding domain
CPF11_10140	SSF53850	Periplasmic binding protein-like II
CPF11_10145	SSF51182	RmlC-like cupins
CPF11_10150	SSF52218	Flavoproteins
CPF11_10155	SSF143744	GlcG-like
CPF11_10160	SSF103473	MFS general substrate transporter
CPF11_10165	SSF53720	ALDH-like
CPF11_10175	SSF51905	FAD/NAD(P)-binding domain
CPF11_10180	SSF46689	Homeodomain-like
CPF11_10180	SSF48498	Tetracyclin repressor-like, C-terminal domain
CPF11_10185	SSF46785	"Winged helix" DNA-binding domain
CPF11_10185	SSF55811	Nudix
CPF11_10190	SSF142754	NadA-like
CPF11_10195	SSF51690	Nicotinate/Quinolinate PRTase C-terminal domain-like
CPF11_10195	SSF54675	Nicotinate/Quinolinate PRTase N-terminal domain-like
CPF11_10205	SSF56059	Glutathione synthetase ATP-binding domain-like
CPF11_10210	SSF54001	Cysteine proteinases
CPF11_10220	SSF55103	FAD-linked oxidases, C-terminal domain
CPF11_10220	SSF56176	FAD-binding/transporter-associated domain-like
CPF11_10225	SSF53720	ALDH-like
CPF11_10230	SSF51735	NAD(P)-binding Rossmann-fold domains
CPF11_10240	SSF46626	Cytochrome c
CPF11_10250	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
CPF11_10255	SSF50249	Nucleic acid-binding proteins
CPF11_10260	SSF52972	ITPase-like
CPF11_10265	SSF50249	Nucleic acid-binding proteins
CPF11_10270	SSF53720	ALDH-like
CPF11_10275	SSF53850	Periplasmic binding protein-like II
CPF11_10280	SSF50249	Nucleic acid-binding proteins
CPF11_10285	SSF53187	Zn-dependent exopeptidases
CPF11_10290	SSF103481	Multidrug resistance efflux transporter EmrE
CPF11_10300	SSF51735	NAD(P)-binding Rossmann-fold domains
CPF11_10305	SSF46548	alpha-helical ferredoxin
CPF11_10305	SSF51971	Nucleotide-binding domain
CPF11_10310	SSF51395	FMN-linked oxidoreductases
CPF11_10310	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
CPF11_10310	SSF69336	Alpha subunit of glutamate synthase, C-terminal domain
CPF11_10315	SSF55486	Metalloproteases ("zincins"), catalytic domain
CPF11_10320	SSF56112	Protein kinase-like (PK-like)
CPF11_10335	SSF56112	Protein kinase-like (PK-like)
CPF11_10340	SSF53098	Ribonuclease H-like
CPF11_10350	SSF103088	OmpA-like
CPF11_10355	SSF111331	NAD kinase/diacylglycerol kinase-like
CPF11_10360	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CPF11_10365	SSF48452	TPR-like
CPF11_10370	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CPF11_10375	SSF52954	Class II aaRS ABD-related
CPF11_10375	SSF55186	ThrRS/AlaRS common domain
CPF11_10375	SSF55681	Class II aaRS and biotin synthetases
CPF11_10375	SSF81271	TGS-like
CPF11_10380	SSF54364	Translation initiation factor IF3, N-terminal domain
CPF11_10380	SSF55200	Translation initiation factor IF3, C-terminal domain
CPF11_10390	SSF158472	HAMP domain-like
CPF11_10390	SSF47384	Homodimeric domain of signal transducing histidine kinase
CPF11_10390	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CPF11_10395	SSF52172	CheY-like
CPF11_10405	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_10410	SSF54919	Nucleoside diphosphate kinase, NDK
CPF11_10415	SSF102114	Radical SAM enzymes
CPF11_10415	SSF52242	Cobalamin (vitamin B12)-binding domain
CPF11_10420	SSF64288	Chorismate lyase-like
CPF11_10425	SSF55008	HMA, heavy metal-associated domain
CPF11_10440	SSF52374	Nucleotidylyl transferase
CPF11_10445	SSF53383	PLP-dependent transferases
CPF11_10450	SSF53383	PLP-dependent transferases
CPF11_10455	SSF53850	Periplasmic binding protein-like II
CPF11_10465	SSF55298	YjgF-like
CPF11_10470	SSF52374	Nucleotidylyl transferase
CPF11_10475	SSF89550	PHP domain-like
CPF11_10480	SSF56322	ADC synthase
CPF11_10485	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
CPF11_10500	SSF50022	ISP domain
CPF11_10500	SSF55961	Bet v1-like
CPF11_10505	SSF52313	Ribosomal protein S2
CPF11_10510	SSF46934	UBA-like
CPF11_10510	SSF54713	Elongation factor Ts (EF-Ts), dimerisation domain
CPF11_10515	SSF57863	ArfGap/RecO-like zinc finger
CPF11_10520	SSF101904	GyrA/ParC C-terminal domain-like
CPF11_10520	SSF56719	Type II DNA topoisomerase
CPF11_10525	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CPF11_10530	SSF51569	Aldolase
CPF11_10540	SSF53383	PLP-dependent transferases
CPF11_10550	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CPF11_10555	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CPF11_10560	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_10575	SSF56784	HAD-like
CPF11_10580	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_10585	SSF52467	DHS-like NAD/FAD-binding domain
CPF11_10585	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
CPF11_10590	SSF55021	ACT-like
CPF11_10595	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
CPF11_10595	SSF51735	NAD(P)-binding Rossmann-fold domains
CPF11_10600	SSF103515	Autotransporter
CPF11_10605	SSF49503	Cupredoxins
CPF11_10615	SSF55008	HMA, heavy metal-associated domain
CPF11_10615	SSF56784	HAD-like
CPF11_10615	SSF81653	Calcium ATPase, transduction domain A
CPF11_10615	SSF81665	Calcium ATPase, transmembrane domain M
CPF11_10620	SSF56784	HAD-like
CPF11_10625	SSF52499	Isochorismatase-like hydrolases
CPF11_10630	SSF48163	An anticodon-binding domain of class I aminoacyl-tRNA synthetases
CPF11_10630	SSF52374	Nucleotidylyl transferase
CPF11_10640	SSF51690	Nicotinate/Quinolinate PRTase C-terminal domain-like
CPF11_10640	SSF54675	Nicotinate/Quinolinate PRTase N-terminal domain-like
CPF11_10645	SSF51569	Aldolase
CPF11_10655	SSF54211	Ribosomal protein S5 domain 2-like
CPF11_10655	SSF54980	EF-G C-terminal domain-like
CPF11_10670	SSF51621	Phosphoenolpyruvate/pyruvate domain
CPF11_10670	SSF52009	Phosphohistidine domain
CPF11_10670	SSF56059	Glutathione synthetase ATP-binding domain-like
CPF11_10675	SSF47781	RuvA domain 2-like
CPF11_10675	SSF50249	Nucleic acid-binding proteins
CPF11_10675	SSF52113	BRCT domain
CPF11_10675	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
CPF11_10680	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_10685	SSF48452	TPR-like
CPF11_10690	SSF54211	Ribosomal protein S5 domain 2-like
CPF11_10695	SSF52490	Tubulin nucleotide-binding domain-like
CPF11_10695	SSF55307	Tubulin C-terminal domain-like
CPF11_10700	SSF53067	Actin-like ATPase domain
CPF11_10710	SSF52440	PreATP-grasp domain
CPF11_10710	SSF56059	Glutathione synthetase ATP-binding domain-like
CPF11_10715	SSF56176	FAD-binding/transporter-associated domain-like
CPF11_10715	SSF56194	Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
CPF11_10720	SSF51984	MurCD N-terminal domain
CPF11_10720	SSF53244	MurD-like peptide ligases, peptide-binding domain
CPF11_10720	SSF53623	MurD-like peptide ligases, catalytic domain
CPF11_10725	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CPF11_10735	SSF51984	MurCD N-terminal domain
CPF11_10735	SSF53244	MurD-like peptide ligases, peptide-binding domain
CPF11_10735	SSF53623	MurD-like peptide ligases, catalytic domain
CPF11_10745	SSF53244	MurD-like peptide ligases, peptide-binding domain
CPF11_10745	SSF53623	MurD-like peptide ligases, catalytic domain
CPF11_10745	SSF63418	MurE/MurF N-terminal domain
CPF11_10750	SSF53244	MurD-like peptide ligases, peptide-binding domain
CPF11_10750	SSF53623	MurD-like peptide ligases, catalytic domain
CPF11_10750	SSF63418	MurE/MurF N-terminal domain
CPF11_10755	SSF56519	Penicillin binding protein dimerisation domain
CPF11_10755	SSF56601	beta-lactamase/transpeptidase-like
CPF11_10765	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CPF11_10765	SSF81799	Putative methyltransferase TM0872, insert domain
CPF11_10770	SSF89447	AbrB/MazE/MraZ-like
CPF11_10780	SSF53474	alpha/beta-Hydrolases
CPF11_10790	SSF51735	NAD(P)-binding Rossmann-fold domains
CPF11_10790	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
CPF11_10805	SSF53633	Carbamate kinase-like
CPF11_10805	SSF88697	PUA domain-like
CPF11_10810	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_10810	SSF82051	Obg GTP-binding protein N-terminal domain
CPF11_10815	SSF110324	Ribosomal L27 protein-like
CPF11_10820	SSF141091	L21p-like
CPF11_10835	SSF51294	Hedgehog/intein (Hint) domain
CPF11_10870	SSF56935	Porins
CPF11_10905	SSF160207	NMB0488-like
CPF11_10910	SSF160207	NMB0488-like
CPF11_10915	SSF160207	NMB0488-like
CPF11_10925	SSF52266	SGNH hydrolase
CPF11_10940	SSF48295	TrpR-like
CPF11_10950	SSF55298	YjgF-like
CPF11_10965	SSF88723	PIN domain-like
CPF11_10980	SSF89447	AbrB/MazE/MraZ-like
CPF11_10990	SSF143011	RelE-like
CPF11_11010	SSF46689	Homeodomain-like
CPF11_11025	SSF56024	Phospholipase D/nuclease
CPF11_11030	SSF46689	Homeodomain-like
CPF11_11030	SSF53041	Resolvase-like
CPF11_11035	SSF51294	Hedgehog/intein (Hint) domain
CPF11_11050	SSF51294	Hedgehog/intein (Hint) domain
CPF11_11065	SSF51294	Hedgehog/intein (Hint) domain
CPF11_11070	SSF53474	alpha/beta-Hydrolases
CPF11_11100	SSF52218	Flavoproteins
CPF11_11105	SSF50022	ISP domain
CPF11_11110	SSF46626	Cytochrome c
CPF11_11115	SSF81342	Transmembrane di-heme cytochromes
CPF11_11115	SSF81648	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
CPF11_11120	SSF53597	Dihydrofolate reductase-like
CPF11_11120	SSF53927	Cytidine deaminase-like
CPF11_11125	SSF63380	Riboflavin synthase domain-like
CPF11_11130	SSF142695	RibA-like
CPF11_11130	SSF55821	YrdC/RibB
CPF11_11135	SSF52121	Lumazine synthase
CPF11_11145	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
CPF11_11150	SSF51905	FAD/NAD(P)-binding domain
CPF11_11165	SSF111369	HlyD-like secretion proteins
CPF11_11180	SSF56300	Metallo-dependent phosphatases
CPF11_11185	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_11195	SSF53218	Molybdenum cofactor biosynthesis proteins
CPF11_11200	SSF52317	Class I glutamine amidotransferase-like
CPF11_11205	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
CPF11_11210	SSF110069	ApaG-like
CPF11_11215	SSF53383	PLP-dependent transferases
CPF11_11220	SSF51182	RmlC-like cupins
CPF11_11220	SSF53448	Nucleotide-diphospho-sugar transferases
CPF11_11225	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CPF11_11225	SSF55811	Nudix
CPF11_11230	SSF50022	ISP domain
CPF11_11230	SSF55961	Bet v1-like
CPF11_11245	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_11250	SSF47823	lambda integrase-like, N-terminal domain
CPF11_11250	SSF56349	DNA breaking-rejoining enzymes
CPF11_11255	SSF53474	alpha/beta-Hydrolases
CPF11_11260	SSF50630	Acid proteases
CPF11_11270	SSF111352	Ammonium transporter
CPF11_11280	SSF52266	SGNH hydrolase
CPF11_11280	SSF56784	HAD-like
CPF11_11300	SSF52266	SGNH hydrolase
CPF11_11310	SSF53448	Nucleotide-diphospho-sugar transferases
CPF11_11315	SSF53448	Nucleotide-diphospho-sugar transferases
CPF11_11315	SSF56112	Protein kinase-like (PK-like)
CPF11_11320	SSF56784	HAD-like
CPF11_11330	SSF48592	GroEL equatorial domain-like
CPF11_11330	SSF52029	GroEL apical domain-like
CPF11_11330	SSF54849	GroEL-intermediate domain like
CPF11_11335	SSF50129	GroES-like
CPF11_11340	SSF53474	alpha/beta-Hydrolases
CPF11_11345	SSF50249	Nucleic acid-binding proteins
CPF11_11350	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_11355	SSF56655	Carbohydrate phosphatase
CPF11_11360	SSF50104	Translation proteins SH3-like domain
CPF11_11360	SSF50249	Nucleic acid-binding proteins
CPF11_11370	SSF51735	NAD(P)-binding Rossmann-fold domains
CPF11_11380	SSF51905	FAD/NAD(P)-binding domain
CPF11_11385	SSF51161	Trimeric LpxA-like enzymes
CPF11_11390	SSF54913	GlnB-like
CPF11_11395	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
CPF11_11395	SSF51735	NAD(P)-binding Rossmann-fold domains
CPF11_11395	SSF52413	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
CPF11_11410	SSF53271	PRTase-like
CPF11_11415	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CPF11_11420	SSF53271	PRTase-like
CPF11_11465	SSF46955	Putative DNA-binding domain
CPF11_11475	SSF46785	"Winged helix" DNA-binding domain
CPF11_11485	SSF56349	DNA breaking-rejoining enzymes
CPF11_11490	SSF53448	Nucleotide-diphospho-sugar transferases
CPF11_11500	SSF51971	Nucleotide-binding domain
CPF11_11500	SSF54373	FAD-linked reductases, C-terminal domain
CPF11_11515	SSF53448	Nucleotide-diphospho-sugar transferases
CPF11_11520	SSF53448	Nucleotide-diphospho-sugar transferases
CPF11_11525	SSF53448	Nucleotide-diphospho-sugar transferases
CPF11_11525	SSF69765	IpsF-like
CPF11_11530	SSF51395	FMN-linked oxidoreductases
CPF11_11535	SSF47384	Homodimeric domain of signal transducing histidine kinase
CPF11_11535	SSF55785	PYP-like sensor domain (PAS domain)
CPF11_11535	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CPF11_11540	SSF46689	Homeodomain-like
CPF11_11540	SSF52172	CheY-like
CPF11_11540	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_11545	SSF158472	HAMP domain-like
CPF11_11545	SSF47384	Homodimeric domain of signal transducing histidine kinase
CPF11_11545	SSF55785	PYP-like sensor domain (PAS domain)
CPF11_11545	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CPF11_11550	SSF46689	Homeodomain-like
CPF11_11550	SSF52172	CheY-like
CPF11_11550	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_11555	SSF50182	Sm-like ribonucleoproteins
CPF11_11560	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_11565	SSF55811	Nudix
CPF11_11570	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_11570	SSF81923	Double Clp-N motif
CPF11_11575	SSF46609	Fe,Mn superoxide dismutase (SOD), N-terminal domain
CPF11_11575	SSF54719	Fe,Mn superoxide dismutase (SOD), C-terminal domain
CPF11_11580	SSF48576	Terpenoid synthases
CPF11_11585	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
CPF11_11585	SSF51735	NAD(P)-binding Rossmann-fold domains
CPF11_11600	SSF52091	SpoIIaa-like
CPF11_11605	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CPF11_11610	SSF141734	HisI-like
CPF11_11615	SSF103025	Folate-binding domain
CPF11_11620	SSF52402	Adenine nucleotide alpha hydrolases-like
CPF11_11620	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
CPF11_11625	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CPF11_11630	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CPF11_11645	SSF50998	Quinoprotein alcohol dehydrogenase-like
CPF11_11650	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_11655	SSF103473	MFS general substrate transporter
CPF11_11660	SSF55931	Glutamine synthetase/guanido kinase
CPF11_11665	SSF75217	alpha/beta knot
CPF11_11665	SSF88697	PUA domain-like
CPF11_11675	SSF89392	Prokaryotic lipoproteins and lipoprotein localization factors
CPF11_11680	SSF48019	post-AAA+ oligomerization domain-like
CPF11_11680	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_11685	SSF55120	Pseudouridine synthase
CPF11_11685	SSF55174	Alpha-L RNA-binding motif
CPF11_11695	SSF160909	ATP12-like
CPF11_11705	SSF47364	Domain of the SRP/SRP receptor G-proteins
CPF11_11705	SSF47446	Signal peptide-binding domain
CPF11_11705	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_11710	SSF54565	Ribosomal protein S16
CPF11_11715	SSF50346	PRC-barrel domain
CPF11_11715	SSF50447	Translation proteins
CPF11_11720	SSF75217	alpha/beta knot
CPF11_11725	SSF50104	Translation proteins SH3-like domain
CPF11_11730	SSF53732	Aconitase iron-sulfur domain
CPF11_11735	SSF52016	LeuD/IlvD-like
CPF11_11740	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
CPF11_11750	SSF56420	Peptide deformylase
CPF11_11760	SSF46785	"Winged helix" DNA-binding domain
CPF11_11765	SSF46894	C-terminal effector domain of the bipartite response regulators
CPF11_11765	SSF52172	CheY-like
CPF11_11770	SSF47384	Homodimeric domain of signal transducing histidine kinase
CPF11_11770	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CPF11_11785	SSF57829	Zn-binding ribosomal proteins
CPF11_11790	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
CPF11_11795	SSF53901	Thiolase-like
CPF11_11800	SSF47729	IHF-like DNA-binding proteins
CPF11_11805	SSF46955	Putative DNA-binding domain
CPF11_11825	SSF52141	Uracil-DNA glycosylase-like
CPF11_11830	SSF47729	IHF-like DNA-binding proteins
CPF11_11840	SSF46785	"Winged helix" DNA-binding domain
CPF11_11840	SSF53850	Periplasmic binding protein-like II
CPF11_11845	SSF51905	FAD/NAD(P)-binding domain
CPF11_11850	SSF46785	"Winged helix" DNA-binding domain
CPF11_11850	SSF54909	Dimeric alpha+beta barrel
CPF11_11855	SSF53448	Nucleotide-diphospho-sugar transferases
CPF11_11865	SSF52440	PreATP-grasp domain
CPF11_11865	SSF56059	Glutathione synthetase ATP-binding domain-like
CPF11_11875	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CPF11_11880	SSF81442	Cytochrome c oxidase subunit I-like
CPF11_11895	SSF54427	NTF2-like
CPF11_11900	SSF111283	Putative modulator of DNA gyrase, PmbA/TldD
CPF11_11905	SSF63411	LuxS/MPP-like metallohydrolase
CPF11_11910	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
CPF11_11915	SSF101898	NHL repeat
CPF11_11920	SSF55486	Metalloproteases ("zincins"), catalytic domain
CPF11_11925	SSF48452	TPR-like
CPF11_11925	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CPF11_11930	SSF48334	DNA repair protein MutS, domain III
CPF11_11930	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_11930	SSF53150	DNA repair protein MutS, domain II
CPF11_11930	SSF55271	DNA repair protein MutS, domain I
CPF11_11935	SSF109604	HD-domain/PDEase-like
CPF11_11935	SSF55021	ACT-like
CPF11_11935	SSF81301	Nucleotidyltransferase
CPF11_11935	SSF81593	Nucleotidyltransferase substrate binding subunit/domain
CPF11_11940	SSF55811	Nudix
CPF11_11945	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_11945	SSF90123	ABC transporter transmembrane region
CPF11_11955	SSF143800	L28p-like
CPF11_11960	SSF50447	Translation proteins
CPF11_11960	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_11960	SSF54211	Ribosomal protein S5 domain 2-like
CPF11_11960	SSF54980	EF-G C-terminal domain-like
CPF11_11965	SSF53474	alpha/beta-Hydrolases
CPF11_11970	SSF51621	Phosphoenolpyruvate/pyruvate domain
CPF11_11980	SSF46785	"Winged helix" DNA-binding domain
CPF11_11985	SSF101960	Stabilizer of iron transporter SufD
CPF11_11990	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_11995	SSF101960	Stabilizer of iron transporter SufD
CPF11_12000	SSF53383	PLP-dependent transferases
CPF11_12005	SSF82649	SufE/NifU
CPF11_12010	SSF117916	Fe-S cluster assembly (FSCA) domain-like
CPF11_12015	SSF89360	HesB-like domain
CPF11_12020	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CPF11_12025	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_12035	SSF53613	Ribokinase-like
CPF11_12035	SSF64153	YjeF N-terminal domain-like
CPF11_12045	SSF102735	Trigger factor ribosome-binding domain
CPF11_12045	SSF109998	Triger factor/SurA peptide-binding domain-like
CPF11_12045	SSF54534	FKBP-like
CPF11_12050	SSF52096	ClpP/crotonase
CPF11_12055	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_12055	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
CPF11_12060	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_12060	SSF54211	Ribosomal protein S5 domain 2-like
CPF11_12060	SSF88697	PUA domain-like
CPF11_12065	SSF47729	IHF-like DNA-binding proteins
CPF11_12080	SSF56770	HydA/Nqo6-like
CPF11_12085	SSF143243	Nqo5-like
CPF11_12090	SSF56762	HydB/Nqo4-like
CPF11_12095	SSF52833	Thioredoxin-like
CPF11_12100	SSF140490	Nqo1C-terminal domain-like
CPF11_12100	SSF142019	Nqo1 FMN-binding domain-like
CPF11_12100	SSF142984	Nqo1 middle domain-like
CPF11_12105	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
CPF11_12105	SSF54292	2Fe-2S ferredoxin-like
CPF11_12105	SSF54862	4Fe-4S ferredoxins
CPF11_12115	SSF54862	4Fe-4S ferredoxins
CPF11_12140	SSF55681	Class II aaRS and biotin synthetases
CPF11_12145	SSF53067	Actin-like ATPase domain
CPF11_12150	SSF56281	Metallo-hydrolase/oxidoreductase
CPF11_12155	SSF52954	Class II aaRS ABD-related
CPF11_12155	SSF55681	Class II aaRS and biotin synthetases
CPF11_12165	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_12170	SSF52833	Thioredoxin-like
CPF11_12175	SSF46785	"Winged helix" DNA-binding domain
CPF11_12175	SSF55781	GAF domain-like
CPF11_12185	SSF53697	SIS domain
CPF11_12185	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
CPF11_12190	SSF51161	Trimeric LpxA-like enzymes
CPF11_12190	SSF53448	Nucleotide-diphospho-sugar transferases
CPF11_12195	SSF56784	HAD-like
CPF11_12200	SSF53448	Nucleotide-diphospho-sugar transferases
CPF11_12220	SSF56300	Metallo-dependent phosphatases
CPF11_12225	SSF111331	NAD kinase/diacylglycerol kinase-like
CPF11_12235	SSF53383	PLP-dependent transferases
CPF11_12240	SSF47336	ACP-like
CPF11_12245	SSF56801	Acetyl-CoA synthetase-like
CPF11_12300	SSF51735	NAD(P)-binding Rossmann-fold domains
CPF11_12305	SSF142906	YjbR-like
CPF11_12310	SSF50891	Cyclophilin-like
CPF11_12315	SSF103473	MFS general substrate transporter
CPF11_12320	SSF46785	"Winged helix" DNA-binding domain
CPF11_12320	SSF53850	Periplasmic binding protein-like II
CPF11_12325	SSF46955	Putative DNA-binding domain
CPF11_12330	SSF51735	NAD(P)-binding Rossmann-fold domains
CPF11_12335	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
CPF11_12335	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
CPF11_12335	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
CPF11_12340	SSF111369	HlyD-like secretion proteins
CPF11_12345	SSF56954	Outer membrane efflux proteins (OEP)
CPF11_12350	SSF46785	"Winged helix" DNA-binding domain
CPF11_12355	SSF53850	Periplasmic binding protein-like II
CPF11_12360	SSF46785	"Winged helix" DNA-binding domain
CPF11_12360	SSF53850	Periplasmic binding protein-like II
CPF11_12365	SSF51730	FAD-linked oxidoreductase
CPF11_12375	SSF51726	UROD/MetE-like
CPF11_12385	SSF50022	ISP domain
CPF11_12385	SSF55961	Bet v1-like
CPF11_12410	SSF51395	FMN-linked oxidoreductases
CPF11_12425	SSF103473	MFS general substrate transporter
CPF11_12435	SSF54427	NTF2-like
CPF11_12440	SSF50129	GroES-like
CPF11_12440	SSF51735	NAD(P)-binding Rossmann-fold domains
CPF11_12445	SSF56935	Porins
CPF11_12455	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_12470	SSF116726	TrkA C-terminal domain-like
CPF11_12475	SSF53383	PLP-dependent transferases
CPF11_12480	SSF53774	Glutaminase/Asparaginase
CPF11_12490	SSF81901	HCP-like
CPF11_12495	SSF56935	Porins
CPF11_12505	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_12505	SSF90123	ABC transporter transmembrane region
CPF11_12510	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_12510	SSF90123	ABC transporter transmembrane region
CPF11_12530	SSF50952	Soluble quinoprotein glucose dehydrogenase
CPF11_12535	SSF50182	Sm-like ribonucleoproteins
CPF11_12535	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
CPF11_12535	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
CPF11_12540	SSF56935	Porins
CPF11_12550	SSF102114	Radical SAM enzymes
CPF11_12555	SSF56935	Porins
CPF11_12560	SSF46785	"Winged helix" DNA-binding domain
CPF11_12565	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CPF11_12570	SSF63380	Riboflavin synthase domain-like
CPF11_12590	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
CPF11_12595	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
CPF11_12600	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_12605	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_12610	SSF161098	MetI-like
CPF11_12615	SSF161098	MetI-like
CPF11_12620	SSF53850	Periplasmic binding protein-like II
CPF11_12625	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
CPF11_12625	SSF54631	CBS-domain pair
CPF11_12630	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CPF11_12635	SSF51735	NAD(P)-binding Rossmann-fold domains
CPF11_12645	SSF46894	C-terminal effector domain of the bipartite response regulators
CPF11_12645	SSF52172	CheY-like
CPF11_12660	SSF52374	Nucleotidylyl transferase
CPF11_12665	SSF46626	Cytochrome c
CPF11_12670	SSF54534	FKBP-like
CPF11_12675	SSF52402	Adenine nucleotide alpha hydrolases-like
CPF11_12675	SSF69864	Argininosuccinate synthetase, C-terminal domain
CPF11_12680	SSF102114	Radical SAM enzymes
CPF11_12690	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CPF11_12690	SSF55174	Alpha-L RNA-binding motif
CPF11_12695	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
CPF11_12695	SSF52922	TK C-terminal domain-like
CPF11_12700	SSF48576	Terpenoid synthases
CPF11_12705	SSF116842	XseB-like
CPF11_12710	SSF64307	SirA-like
CPF11_12715	SSF53067	Actin-like ATPase domain
CPF11_12720	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CPF11_12725	SSF53067	Actin-like ATPase domain
CPF11_12735	SSF50692	ADC-like
CPF11_12735	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
CPF11_12740	SSF54862	4Fe-4S ferredoxins
CPF11_12745	SSF81342	Transmembrane di-heme cytochromes
CPF11_12750	SSF144020	FdhE-like
CPF11_12755	SSF53218	Molybdenum cofactor biosynthesis proteins
CPF11_12755	SSF63882	MoeA N-terminal region -like
CPF11_12760	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_12765	SSF53448	Nucleotide-diphospho-sugar transferases
CPF11_12770	SSF53927	Cytidine deaminase-like
CPF11_12775	SSF47616	GST C-terminal domain-like
CPF11_12775	SSF52833	Thioredoxin-like
CPF11_12785	SSF46689	Homeodomain-like
CPF11_12790	SSF46548	alpha-helical ferredoxin
CPF11_12790	SSF51971	Nucleotide-binding domain
CPF11_12790	SSF54862	4Fe-4S ferredoxins
CPF11_12795	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
CPF11_12795	SSF52922	TK C-terminal domain-like
CPF11_12795	SSF53323	Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
CPF11_12795	SSF54862	4Fe-4S ferredoxins
CPF11_12800	SSF51395	FMN-linked oxidoreductases
CPF11_12805	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
CPF11_12810	SSF53067	Actin-like ATPase domain
CPF11_12855	SSF50998	Quinoprotein alcohol dehydrogenase-like
CPF11_12865	SSF46689	Homeodomain-like
CPF11_12865	SSF55781	GAF domain-like
CPF11_12875	SSF48557	L-aspartase-like
CPF11_12880	SSF54909	Dimeric alpha+beta barrel
CPF11_12885	SSF55124	Nitrite/Sulfite reductase N-terminal domain-like
CPF11_12885	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
CPF11_12890	SSF63965	Precorrin-8X methylmutase CbiC/CobH
CPF11_12895	SSF53790	Tetrapyrrole methylase
CPF11_12900	SSF53790	Tetrapyrrole methylase
CPF11_12910	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CPF11_12910	SSF53790	Tetrapyrrole methylase
CPF11_12915	SSF159664	CobE/GbiG C-terminal domain-like
CPF11_12920	SSF53790	Tetrapyrrole methylase
CPF11_12925	SSF111342	CbiD-like
CPF11_12930	SSF103473	MFS general substrate transporter
CPF11_12935	SSF47616	GST C-terminal domain-like
CPF11_12935	SSF52833	Thioredoxin-like
CPF11_12940	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CPF11_12945	SSF118215	Proton glutamate symport protein
CPF11_12950	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_12990	SSF48613	Heme oxygenase-like
CPF11_12995	SSF46689	Homeodomain-like
CPF11_12995	SSF48498	Tetracyclin repressor-like, C-terminal domain
CPF11_13000	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_13030	SSF89550	PHP domain-like
CPF11_13035	SSF47616	GST C-terminal domain-like
CPF11_13035	SSF52833	Thioredoxin-like
CPF11_13040	SSF109709	KorB DNA-binding domain-like
CPF11_13040	SSF110849	ParB/Sulfiredoxin
CPF11_13045	SSF46785	"Winged helix" DNA-binding domain
CPF11_13045	SSF53850	Periplasmic binding protein-like II
CPF11_13060	SSF56784	HAD-like
CPF11_13075	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CPF11_13110	SSF48295	TrpR-like
CPF11_13130	SSF47729	IHF-like DNA-binding proteins
CPF11_13135	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_13135	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CPF11_13185	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CPF11_13200	SSF51306	LexA/Signal peptidase
CPF11_13215	SSF53955	Lysozyme-like
CPF11_13245	SSF54909	Dimeric alpha+beta barrel
CPF11_13255	SSF53474	alpha/beta-Hydrolases
CPF11_13260	SSF51182	RmlC-like cupins
CPF11_13280	SSF46689	Homeodomain-like
CPF11_13280	SSF48498	Tetracyclin repressor-like, C-terminal domain
CPF11_13285	SSF52317	Class I glutamine amidotransferase-like
CPF11_13290	SSF53720	ALDH-like
CPF11_13295	SSF82784	OsmC-like
CPF11_13300	SSF50129	GroES-like
CPF11_13300	SSF51735	NAD(P)-binding Rossmann-fold domains
CPF11_13305	SSF46689	Homeodomain-like
CPF11_13310	SSF53720	ALDH-like
CPF11_13330	SSF53850	Periplasmic binding protein-like II
CPF11_13335	SSF52218	Flavoproteins
CPF11_13340	SSF101874	YceI-like
CPF11_13350	SSF111369	HlyD-like secretion proteins
CPF11_13355	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
CPF11_13355	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
CPF11_13355	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
CPF11_13360	SSF56954	Outer membrane efflux proteins (OEP)
CPF11_13365	SSF46689	Homeodomain-like
CPF11_13370	SSF46785	"Winged helix" DNA-binding domain
CPF11_13370	SSF53850	Periplasmic binding protein-like II
CPF11_13375	SSF51726	UROD/MetE-like
CPF11_13390	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_13390	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CPF11_13395	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_13410	SSF47823	lambda integrase-like, N-terminal domain
CPF11_13410	SSF56349	DNA breaking-rejoining enzymes
CPF11_13420	SSF53098	Ribonuclease H-like
CPF11_13445	SSF56935	Porins
CPF11_13460	SSF74653	TolA/TonB C-terminal domain
CPF11_13480	SSF46785	"Winged helix" DNA-binding domain
CPF11_13485	SSF46458	Globin-like
CPF11_13485	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
CPF11_13485	SSF63380	Riboflavin synthase domain-like
CPF11_13490	SSF81442	Cytochrome c oxidase subunit I-like
CPF11_13500	SSF55785	PYP-like sensor domain (PAS domain)
CPF11_13505	SSF51197	Clavaminate synthase-like
CPF11_13520	SSF46785	"Winged helix" DNA-binding domain
CPF11_13520	SSF51206	cAMP-binding domain-like
CPF11_13535	SSF48295	TrpR-like
CPF11_13550	SSF143011	RelE-like
CPF11_13560	SSF51395	FMN-linked oxidoreductases
CPF11_13575	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CPF11_13590	SSF50610	mu transposase, C-terminal domain
CPF11_13590	SSF53098	Ribonuclease H-like
CPF11_13595	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_13605	SSF89447	AbrB/MazE/MraZ-like
CPF11_13610	SSF88723	PIN domain-like
CPF11_13640	SSF56954	Outer membrane efflux proteins (OEP)
CPF11_13645	SSF111369	HlyD-like secretion proteins
CPF11_13650	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
CPF11_13650	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
CPF11_13650	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
CPF11_13655	SSF52172	CheY-like
CPF11_13660	SSF47384	Homodimeric domain of signal transducing histidine kinase
CPF11_13660	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CPF11_13670	SSF103473	MFS general substrate transporter
CPF11_13680	SSF50022	ISP domain
CPF11_13680	SSF51905	FAD/NAD(P)-binding domain
CPF11_13680	SSF55124	Nitrite/Sulfite reductase N-terminal domain-like
CPF11_13680	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
CPF11_13695	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
CPF11_13700	SSF51905	FAD/NAD(P)-binding domain
CPF11_13705	SSF53720	ALDH-like
CPF11_13710	SSF55298	YjgF-like
CPF11_13720	SSF51905	FAD/NAD(P)-binding domain
CPF11_13720	SSF54373	FAD-linked reductases, C-terminal domain
CPF11_13725	SSF53187	Zn-dependent exopeptidases
CPF11_13725	SSF55031	Bacterial exopeptidase dimerisation domain
CPF11_13730	SSF46785	"Winged helix" DNA-binding domain
CPF11_13730	SSF53850	Periplasmic binding protein-like II
CPF11_13800	SSF56801	Acetyl-CoA synthetase-like
CPF11_13805	SSF53098	Ribonuclease H-like
CPF11_13815	SSF89447	AbrB/MazE/MraZ-like
CPF11_13820	SSF88723	PIN domain-like
CPF11_13825	SSF89447	AbrB/MazE/MraZ-like
CPF11_13830	SSF50118	Cell growth inhibitor/plasmid maintenance toxic component
CPF11_13850	SSF53955	Lysozyme-like
CPF11_13875	SSF47729	IHF-like DNA-binding proteins
CPF11_13880	SSF142921	WGR domain-like
CPF11_13890	SSF81301	Nucleotidyltransferase
CPF11_13910	SSF53098	Ribonuclease H-like
CPF11_13920	SSF46785	"Winged helix" DNA-binding domain
CPF11_13920	SSF51206	cAMP-binding domain-like
CPF11_13935	SSF51197	Clavaminate synthase-like
CPF11_13940	SSF55785	PYP-like sensor domain (PAS domain)
CPF11_13955	SSF50129	GroES-like
CPF11_13955	SSF51735	NAD(P)-binding Rossmann-fold domains
CPF11_13960	SSF46689	Homeodomain-like
CPF11_13970	SSF53098	Ribonuclease H-like
CPF11_13980	SSF54427	NTF2-like
CPF11_13985	SSF53098	Ribonuclease H-like
CPF11_13990	SSF54427	NTF2-like
CPF11_14005	SSF46689	Homeodomain-like
CPF11_14005	SSF48498	Tetracyclin repressor-like, C-terminal domain
CPF11_14010	SSF56796	Dehydroquinate synthase-like
CPF11_14015	SSF53720	ALDH-like
CPF11_14020	SSF53098	Ribonuclease H-like
CPF11_14030	SSF53098	Ribonuclease H-like
CPF11_14040	SSF81301	Nucleotidyltransferase
CPF11_14045	SSF81593	Nucleotidyltransferase substrate binding subunit/domain
CPF11_14050	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CPF11_14055	SSF46785	"Winged helix" DNA-binding domain
CPF11_14060	SSF52833	Thioredoxin-like
CPF11_14070	SSF52218	Flavoproteins
CPF11_14075	SSF51905	FAD/NAD(P)-binding domain
CPF11_14085	SSF47413	lambda repressor-like DNA-binding domains
CPF11_14095	SSF47413	lambda repressor-like DNA-binding domains
CPF11_14100	SSF47823	lambda integrase-like, N-terminal domain
CPF11_14100	SSF56349	DNA breaking-rejoining enzymes
CPF11_14110	SSF47413	lambda repressor-like DNA-binding domains
CPF11_14135	SSF46689	Homeodomain-like
CPF11_14135	SSF53041	Resolvase-like
CPF11_14165	SSF140931	Fic-like
CPF11_14175	SSF143011	RelE-like
CPF11_14180	SSF143120	YefM-like
CPF11_14200	SSF88723	PIN domain-like
CPF11_14205	SSF47598	Ribbon-helix-helix
CPF11_14215	SSF47598	Ribbon-helix-helix
CPF11_14240	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPF11_14245	SSF53041	Resolvase-like
CPF11_14250	SSF46689	Homeodomain-like
CPF11_14250	SSF53041	Resolvase-like
CPF11_14260	SSF46689	Homeodomain-like
CPF11_14260	SSF53041	Resolvase-like
CPF11_14280	SSF88723	PIN domain-like
CPF11_14285	SSF143120	YefM-like