locus-tag class description CJF59_00110 PF03354 Phage Terminase CJF59_00230 PF02920 DNA binding domain of tn916 integrase CJF59_00230 PF00589 Phage integrase family CJF59_00245 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CJF59_00245 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CJF59_00250 PF01926 50S ribosome-binding GTPase CJF59_00250 PF12631 MnmE helical domain CJF59_00250 PF10396 GTP-binding protein TrmE N-terminus CJF59_00255 PF01134 Glucose inhibited division protein A CJF59_00255 PF13932 GidA associated domain CJF59_00260 PF02527 rRNA small subunit methyltransferase G CJF59_00265 PF13614 AAA domain CJF59_00270 PF02195 ParB-like nuclease domain CJF59_00270 PF17762 HTH domain found in ParB protein CJF59_00290 PF13811 Domain of unknown function (DUF4186) CJF59_00295 PF01494 FAD binding domain CJF59_00300 PF00881 Nitroreductase family CJF59_00305 PF01230 HIT domain CJF59_00310 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CJF59_00315 PF00977 Histidine biosynthesis protein CJF59_00320 PF00977 Histidine biosynthesis protein CJF59_00325 PF00117 Glutamine amidotransferase class-I CJF59_00330 PF00475 Imidazoleglycerol-phosphate dehydratase CJF59_00335 PF02540 NAD synthase CJF59_00335 PF00795 Carbon-nitrogen hydrolase CJF59_00345 PF00535 Glycosyl transferase family 2 CJF59_00365 PF00216 Bacterial DNA-binding protein CJF59_00385 PF14748 Pyrroline-5-carboxylate reductase dimerisation CJF59_00385 PF03807 NADP oxidoreductase coenzyme F420-dependent CJF59_00425 PF01960 ArgJ family CJF59_00435 PF07516 SecA Wing and Scaffold domain CJF59_00435 PF02810 SEC-C motif CJF59_00435 PF07517 SecA DEAD-like domain CJF59_00435 PF01043 SecA preprotein cross-linking domain CJF59_00440 PF01709 Transcriptional regulator CJF59_00445 PF02075 Crossover junction endodeoxyribonuclease RuvC CJF59_00450 PF07499 RuvA, C-terminal domain CJF59_00450 PF01330 RuvA N terminal domain CJF59_00455 PF05491 RuvB C-terminal winged helix domain CJF59_00455 PF17864 RuvB AAA lid domain CJF59_00455 PF05496 Holliday junction DNA helicase RuvB P-loop domain CJF59_00460 PF03061 Thioesterase superfamily CJF59_00465 PF01618 MotA/TolQ/ExbB proton channel family CJF59_00470 PF02472 Biopolymer transport protein ExbD/TolR CJF59_00480 PF04052 TolB amino-terminal domain CJF59_00480 PF07676 WD40-like Beta Propeller Repeat CJF59_00485 PF00691 OmpA family CJF59_00495 PF01171 PP-loop family CJF59_00500 PF00004 ATPase family associated with various cellular activities (AAA) CJF59_00500 PF17862 AAA+ lid domain CJF59_00500 PF01434 Peptidase family M41 CJF59_00500 PF06480 FtsH Extracellular CJF59_00505 PF00809 Pterin binding enzyme CJF59_00510 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CJF59_00510 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CJF59_00510 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CJF59_00510 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CJF59_00515 PF00072 Response regulator receiver domain CJF59_00515 PF00486 Transcriptional regulatory protein, C terminal CJF59_00520 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CJF59_00525 PF12705 PD-(D/E)XK nuclease superfamily CJF59_00530 PF12705 PD-(D/E)XK nuclease superfamily CJF59_00530 PF00580 UvrD/REP helicase N-terminal domain CJF59_00530 PF13361 UvrD-like helicase C-terminal domain CJF59_00535 PF00085 Thioredoxin CJF59_00540 PF01039 Carboxyl transferase domain CJF59_00540 PF17848 Acetyl-coA carboxylase zinc finger domain CJF59_00545 PF02875 Mur ligase family, glutamate ligase domain CJF59_00545 PF08245 Mur ligase middle domain CJF59_00555 PF09190 DALR domain CJF59_00555 PF01406 tRNA synthetases class I (C) catalytic domain CJF59_00565 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CJF59_00575 PF00266 Aminotransferase class-V CJF59_00580 PF00111 2Fe-2S iron-sulfur cluster binding domain CJF59_00595 PF13439 Glycosyltransferase Family 4 CJF59_00595 PF00534 Glycosyl transferases group 1 CJF59_00600 PF01479 S4 domain CJF59_00600 PF00849 RNA pseudouridylate synthase CJF59_00605 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CJF59_00605 PF17854 FtsK alpha domain CJF59_00605 PF09397 Ftsk gamma domain CJF59_00605 PF01580 FtsK/SpoIIIE family CJF59_00610 PF00535 Glycosyl transferase family 2 CJF59_00615 PF04321 RmlD substrate binding domain CJF59_00620 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CJF59_00625 PF00483 Nucleotidyl transferase CJF59_00630 PF16363 GDP-mannose 4,6 dehydratase CJF59_00640 PF00300 Histidine phosphatase superfamily (branch 1) CJF59_00645 PF01523 Putative modulator of DNA gyrase CJF59_00650 PF00579 tRNA synthetases class I (W and Y) CJF59_00670 PF01258 Prokaryotic dksA/traR C4-type zinc finger CJF59_00680 PF00436 Single-strand binding protein family CJF59_00690 PF01479 S4 domain CJF59_00690 PF00849 RNA pseudouridylate synthase CJF59_00695 PF07722 Peptidase C26 CJF59_00700 PF14437 MafB19-like deaminase CJF59_00705 PF13180 PDZ domain CJF59_00710 PF00027 Cyclic nucleotide-binding domain CJF59_00710 PF13545 Crp-like helix-turn-helix domain CJF59_00720 PF04055 Radical SAM superfamily CJF59_00735 PF01012 Electron transfer flavoprotein domain CJF59_00740 PF01012 Electron transfer flavoprotein domain CJF59_00740 PF00766 Electron transfer flavoprotein FAD-binding domain CJF59_00750 PF02321 Outer membrane efflux protein CJF59_00785 PF03466 LysR substrate binding domain CJF59_00785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJF59_00795 PF07690 Major Facilitator Superfamily CJF59_00800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJF59_00800 PF03466 LysR substrate binding domain CJF59_00825 PF10502 Signal peptidase, peptidase S26 CJF59_00850 PF01381 Helix-turn-helix CJF59_00865 PF02899 Phage integrase, N-terminal SAM-like domain CJF59_00865 PF00589 Phage integrase family CJF59_00880 PF00133 tRNA synthetases class I (I, L, M and V) CJF59_00880 PF13603 Leucyl-tRNA synthetase, Domain 2 CJF59_00880 PF08264 Anticodon-binding domain of tRNA CJF59_00885 PF12100 Domain of unknown function (DUF3576) CJF59_00905 PF00730 HhH-GPD superfamily base excision DNA repair protein CJF59_00905 PF14815 NUDIX domain CJF59_00910 PF00762 Ferrochelatase CJF59_00915 PF00730 HhH-GPD superfamily base excision DNA repair protein CJF59_00915 PF00633 Helix-hairpin-helix motif CJF59_00915 PF10576 Iron-sulfur binding domain of endonuclease III CJF59_00920 PF00664 ABC transporter transmembrane region CJF59_00920 PF00005 ABC transporter CJF59_00930 PF02637 GatB domain CJF59_00930 PF02934 GatB/GatE catalytic domain CJF59_00935 PF01425 Amidase CJF59_00940 PF02686 Glu-tRNAGln amidotransferase C subunit CJF59_00945 PF03652 Holliday junction resolvase CJF59_00955 PF00202 Aminotransferase class-III CJF59_00980 PF04966 Carbohydrate-selective porin, OprB family CJF59_00985 PF10634 Fe2+ transport protein CJF59_00990 PF03239 Iron permease FTR1 family CJF59_01005 PF13667 ThiC-associated domain CJF59_01005 PF01964 Radical SAM ThiC family CJF59_01010 PF00083 Sugar (and other) transporter CJF59_01015 PF02785 Biotin carboxylase C-terminal domain CJF59_01015 PF00289 Biotin carboxylase, N-terminal domain CJF59_01015 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CJF59_01020 PF00364 Biotin-requiring enzyme CJF59_01025 PF01220 Dehydroquinase class II CJF59_01030 PF03330 Lytic transglycolase CJF59_01030 PF05036 Sporulation related domain CJF59_01035 PF03631 Virulence factor BrkB CJF59_01040 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CJF59_01040 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CJF59_01050 PF03379 CcmB protein CJF59_01055 PF00005 ABC transporter CJF59_01060 PF00330 Aconitase family (aconitate hydratase) CJF59_01060 PF00694 Aconitase C-terminal domain CJF59_01065 PF00005 ABC transporter CJF59_01070 PF00528 Binding-protein-dependent transport system inner membrane component CJF59_01075 PF03466 LysR substrate binding domain CJF59_01075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJF59_01085 PF02861 Clp amino terminal domain, pathogenicity island component CJF59_01085 PF07724 AAA domain (Cdc48 subfamily) CJF59_01085 PF00004 ATPase family associated with various cellular activities (AAA) CJF59_01085 PF17871 AAA lid domain CJF59_01085 PF10431 C-terminal, D2-small domain, of ClpB protein CJF59_01095 PF02576 RimP N-terminal domain CJF59_01095 PF17384 RimP C-terminal SH3 domain CJF59_01100 PF00575 S1 RNA binding domain CJF59_01100 PF13184 NusA-like KH domain CJF59_01100 PF08529 NusA N-terminal domain CJF59_01110 PF08364 Bacterial translation initiation factor IF-2 associated region CJF59_01110 PF04760 Translation initiation factor IF-2, N-terminal region CJF59_01110 PF11987 Translation-initiation factor 2 CJF59_01110 PF00009 Elongation factor Tu GTP binding domain CJF59_01115 PF02033 Ribosome-binding factor A CJF59_01120 PF01037 Lrp/AsnC ligand binding domain CJF59_01125 PF01168 Alanine racemase, N-terminal domain CJF59_01125 PF00842 Alanine racemase, C-terminal domain CJF59_01130 PF01266 FAD dependent oxidoreductase CJF59_01140 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CJF59_01145 PF05681 Fumarate hydratase (Fumerase) CJF59_01145 PF05683 Fumarase C-terminus CJF59_01160 PF02511 Thymidylate synthase complementing protein CJF59_01175 PF10609 NUBPL iron-transfer P-loop NTPase CJF59_01190 PF13180 PDZ domain CJF59_01200 PF08240 Alcohol dehydrogenase GroES-like domain CJF59_01200 PF00107 Zinc-binding dehydrogenase CJF59_01210 PF00920 Dehydratase family CJF59_01215 PF00528 Binding-protein-dependent transport system inner membrane component CJF59_01220 PF00528 Binding-protein-dependent transport system inner membrane component CJF59_01225 PF00005 ABC transporter CJF59_01230 PF01895 PhoU domain CJF59_01245 PF00572 Ribosomal protein L13 CJF59_01250 PF00380 Ribosomal protein S9/S16 CJF59_01265 PF00271 Helicase conserved C-terminal domain CJF59_01265 PF00270 DEAD/DEAH box helicase CJF59_01265 PF03880 DbpA RNA binding domain CJF59_01275 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CJF59_01280 PF01678 Diaminopimelate epimerase CJF59_01285 PF00919 Uncharacterized protein family UPF0004 CJF59_01285 PF04055 Radical SAM superfamily CJF59_01290 PF00448 SRP54-type protein, GTPase domain CJF59_01290 PF02881 SRP54-type protein, helical bundle domain CJF59_01295 PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter CJF59_01300 PF00119 ATP synthase A chain CJF59_01305 PF00137 ATP synthase subunit C CJF59_01310 PF00430 ATP synthase B/B' CF(0) CJF59_01315 PF00430 ATP synthase B/B' CF(0) CJF59_01320 PF00535 Glycosyl transferase family 2 CJF59_01325 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase CJF59_01335 PF04403 Paraquat-inducible protein A CJF59_01340 PF02470 MlaD protein CJF59_01350 PF13537 Glutamine amidotransferase domain CJF59_01350 PF00156 Phosphoribosyl transferase domain CJF59_01365 PF02310 B12 binding domain CJF59_01365 PF02965 Vitamin B12 dependent methionine synthase, activation domain CJF59_01365 PF02574 Homocysteine S-methyltransferase CJF59_01365 PF00809 Pterin binding enzyme CJF59_01365 PF02607 B12 binding domain CJF59_01375 PF00664 ABC transporter transmembrane region CJF59_01375 PF00005 ABC transporter CJF59_01375 PF03412 Peptidase C39 family CJF59_01410 PF02470 MlaD protein CJF59_01415 PF00005 ABC transporter CJF59_01420 PF02405 Permease MlaE CJF59_01425 PF16198 tRNA pseudouridylate synthase B C-terminal domain CJF59_01425 PF01509 TruB family pseudouridylate synthase (N terminal domain) CJF59_01430 PF00312 Ribosomal protein S15 CJF59_01435 PF00575 S1 RNA binding domain CJF59_01435 PF01138 3' exoribonuclease family, domain 1 CJF59_01435 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CJF59_01435 PF03725 3' exoribonuclease family, domain 2 CJF59_01435 PF00013 KH domain CJF59_01450 PF03989 DNA gyrase C-terminal domain, beta-propeller CJF59_01450 PF00521 DNA gyrase/topoisomerase IV, subunit A CJF59_01455 PF01467 Cytidylyltransferase-like CJF59_01460 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CJF59_01480 PF01381 Helix-turn-helix CJF59_01515 PF13307 Helicase C-terminal domain CJF59_01515 PF00929 Exonuclease CJF59_01515 PF04851 Type III restriction enzyme, res subunit CJF59_01575 PF02899 Phage integrase, N-terminal SAM-like domain CJF59_01575 PF00589 Phage integrase family CJF59_01605 PF00574 Clp protease CJF59_01720 PF03466 LysR substrate binding domain CJF59_01720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJF59_01730 PF02675 S-adenosylmethionine decarboxylase CJF59_01735 PF17284 Spermidine synthase tetramerisation domain CJF59_01740 PF08669 Glycine cleavage T-protein C-terminal barrel domain CJF59_01740 PF01571 Aminomethyltransferase folate-binding domain CJF59_01745 PF01597 Glycine cleavage H-protein CJF59_01750 PF02347 Glycine cleavage system P-protein CJF59_01780 PF00753 Metallo-beta-lactamase superfamily CJF59_01790 PF01370 NAD dependent epimerase/dehydratase family CJF59_01825 PF12802 MarR family CJF59_01830 PF01494 FAD binding domain CJF59_01835 PF00111 2Fe-2S iron-sulfur cluster binding domain CJF59_01835 PF01799 [2Fe-2S] binding domain CJF59_01840 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CJF59_01840 PF00034 Cytochrome c CJF59_01840 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CJF59_01850 PF00857 Isochorismatase family CJF59_01855 PF00561 alpha/beta hydrolase fold CJF59_01860 PF17645 Arylmalonate decarboxylase CJF59_01865 PF07690 Major Facilitator Superfamily CJF59_01875 PF03466 LysR substrate binding domain CJF59_01875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJF59_01885 PF13533 Biotin-lipoyl like CJF59_01890 PF02321 Outer membrane efflux protein CJF59_01900 PF03960 ArsC family CJF59_01910 PF01925 Sulfite exporter TauE/SafE CJF59_01915 PF00753 Metallo-beta-lactamase superfamily CJF59_01920 PF10417 C-terminal domain of 1-Cys peroxiredoxin CJF59_01920 PF00578 AhpC/TSA family CJF59_01930 PF03352 Methyladenine glycosylase CJF59_01940 PF03960 ArsC family CJF59_01945 PF00210 Ferritin-like domain CJF59_01965 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CJF59_01965 PF00205 Thiamine pyrophosphate enzyme, central domain CJF59_01965 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CJF59_01970 PF03824 High-affinity nickel-transport protein CJF59_01975 PF01774 UreD urease accessory protein CJF59_01980 PF00547 Urease, gamma subunit CJF59_01985 PF00699 Urease beta subunit CJF59_01990 PF01979 Amidohydrolase family CJF59_01990 PF00449 Urease alpha-subunit, N-terminal domain CJF59_01995 PF02814 UreE urease accessory protein, N-terminal domain CJF59_01995 PF05194 UreE urease accessory protein, C-terminal domain CJF59_02000 PF01730 UreF CJF59_02005 PF02492 CobW/HypB/UreG, nucleotide-binding domain CJF59_02020 PF00486 Transcriptional regulatory protein, C terminal CJF59_02020 PF00072 Response regulator receiver domain CJF59_02025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJF59_02025 PF18415 Histidine kinase receptor ArcB trans-membrane domain CJF59_02025 PF01627 Hpt domain CJF59_02025 PF00989 PAS fold CJF59_02025 PF00072 Response regulator receiver domain CJF59_02025 PF00512 His Kinase A (phospho-acceptor) domain CJF59_02035 PF02653 Branched-chain amino acid transport system / permease component CJF59_02045 PF00005 ABC transporter CJF59_02045 PF12399 Branched-chain amino acid ATP-binding cassette transporter CJF59_02050 PF00005 ABC transporter CJF59_02065 PF07690 Major Facilitator Superfamily CJF59_02075 PF03466 LysR substrate binding domain CJF59_02075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJF59_02090 PF01609 Transposase DDE domain CJF59_02100 PF00155 Aminotransferase class I and II CJF59_02100 PF00392 Bacterial regulatory proteins, gntR family CJF59_02110 PF00795 Carbon-nitrogen hydrolase CJF59_02125 PF02769 AIR synthase related protein, C-terminal domain CJF59_02125 PF00586 AIR synthase related protein, N-terminal domain CJF59_02130 PF00534 Glycosyl transferases group 1 CJF59_02145 PF16177 Acetyl-coenzyme A synthetase N-terminus CJF59_02145 PF00501 AMP-binding enzyme CJF59_02145 PF13193 AMP-binding enzyme C-terminal domain CJF59_02150 PF07690 Major Facilitator Superfamily CJF59_02155 PF00117 Glutamine amidotransferase class-I CJF59_02165 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CJF59_02165 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CJF59_02170 PF00392 Bacterial regulatory proteins, gntR family CJF59_02170 PF00155 Aminotransferase class I and II CJF59_02180 PF00701 Dihydrodipicolinate synthetase family CJF59_02200 PF02311 AraC-like ligand binding domain CJF59_02200 PF12833 Helix-turn-helix domain CJF59_02205 PF04954 Siderophore-interacting protein CJF59_02205 PF08021 Siderophore-interacting FAD-binding domain CJF59_02205 PF00005 ABC transporter CJF59_02205 PF00664 ABC transporter transmembrane region CJF59_02210 PF00005 ABC transporter CJF59_02210 PF00664 ABC transporter transmembrane region CJF59_02245 PF00561 alpha/beta hydrolase fold CJF59_02250 PF09278 MerR, DNA binding CJF59_02250 PF00376 MerR family regulatory protein CJF59_02450 PF04055 Radical SAM superfamily CJF59_02450 PF06969 HemN C-terminal domain CJF59_02455 PF02705 K+ potassium transporter CJF59_02460 PF01168 Alanine racemase, N-terminal domain CJF59_02465 PF00107 Zinc-binding dehydrogenase CJF59_02465 PF08240 Alcohol dehydrogenase GroES-like domain CJF59_02470 PF00654 Voltage gated chloride channel CJF59_02495 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CJF59_02500 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CJF59_02510 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CJF59_02510 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CJF59_02515 PF00923 Transaldolase/Fructose-6-phosphate aldolase CJF59_02520 PF00456 Transketolase, thiamine diphosphate binding domain CJF59_02520 PF02779 Transketolase, pyrimidine binding domain CJF59_02520 PF02780 Transketolase, C-terminal domain CJF59_02530 PF00155 Aminotransferase class I and II CJF59_02545 PF02694 Uncharacterised BCR, YnfA/UPF0060 family CJF59_02550 PF00005 ABC transporter CJF59_02580 PF01790 Prolipoprotein diacylglyceryl transferase CJF59_02585 PF01370 NAD dependent epimerase/dehydratase family CJF59_02595 PF02652 L-lactate permease CJF59_02600 PF01551 Peptidase family M23 CJF59_02600 PF10145 Phage-related minor tail protein CJF59_02600 PF01464 Transglycosylase SLT domain CJF59_02605 PF00083 Sugar (and other) transporter CJF59_02620 PF00958 GMP synthase C terminal domain CJF59_02620 PF02540 NAD synthase CJF59_02620 PF00117 Glutamine amidotransferase class-I CJF59_02625 PF13356 Arm DNA-binding domain CJF59_02625 PF00589 Phage integrase family CJF59_02640 PF10134 Replication initiator protein A CJF59_02655 PF02796 Helix-turn-helix domain of resolvase CJF59_02655 PF00239 Resolvase, N terminal domain CJF59_02660 PF00271 Helicase conserved C-terminal domain CJF59_02660 PF00176 SNF2 family N-terminal domain CJF59_02665 PF01555 DNA methylase CJF59_02675 PF00571 CBS domain CJF59_02675 PF00291 Pyridoxal-phosphate dependent enzyme CJF59_02690 PF01008 Initiation factor 2 subunit family CJF59_02705 PF01475 Ferric uptake regulator family CJF59_02715 PF00005 ABC transporter CJF59_02720 PF00950 ABC 3 transport family CJF59_02725 PF01613 Flavin reductase like domain CJF59_02730 PF00378 Enoyl-CoA hydratase/isomerase CJF59_02735 PF01184 GPR1/FUN34/yaaH family CJF59_02740 PF04632 Fusaric acid resistance protein family CJF59_02755 PF02492 CobW/HypB/UreG, nucleotide-binding domain CJF59_02755 PF07683 Cobalamin synthesis protein cobW C-terminal domain CJF59_02760 PF02514 CobN/Magnesium Chelatase CJF59_02765 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CJF59_02765 PF07685 CobB/CobQ-like glutamine amidotransferase domain CJF59_02775 PF12557 Cob(I)alamin adenosyltransferase N terminal CJF59_02775 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CJF59_02780 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CJF59_02780 PF07685 CobB/CobQ-like glutamine amidotransferase domain CJF59_02785 PF00881 Nitroreductase family CJF59_02790 PF03186 CobD/Cbib protein CJF59_02795 PF00155 Aminotransferase class I and II CJF59_02800 PF02654 Cobalamin-5-phosphate synthase CJF59_02805 PF02277 Phosphoribosyltransferase CJF59_02810 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CJF59_02815 PF07690 Major Facilitator Superfamily CJF59_02820 PF00171 Aldehyde dehydrogenase family CJF59_02825 PF00034 Cytochrome c CJF59_02825 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CJF59_02830 PF05199 GMC oxidoreductase CJF59_02830 PF00732 GMC oxidoreductase CJF59_02850 PF00375 Sodium:dicarboxylate symporter family CJF59_02855 PF00355 Rieske [2Fe-2S] domain CJF59_02870 PF02472 Biopolymer transport protein ExbD/TolR CJF59_02875 PF01618 MotA/TolQ/ExbB proton channel family CJF59_02890 PF02796 Helix-turn-helix domain of resolvase CJF59_02890 PF00239 Resolvase, N terminal domain CJF59_02940 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CJF59_02940 PF10414 Sirohaem synthase dimerisation region CJF59_02940 PF14824 Sirohaem biosynthesis protein central CJF59_02945 PF02913 FAD linked oxidases, C-terminal domain CJF59_02945 PF01565 FAD binding domain CJF59_02950 PF03180 NLPA lipoprotein CJF59_02955 PF00005 ABC transporter CJF59_02955 PF09383 NIL domain CJF59_02960 PF00528 Binding-protein-dependent transport system inner membrane component CJF59_02965 PF00175 Oxidoreductase NAD-binding domain CJF59_02965 PF00042 Globin CJF59_02965 PF00970 Oxidoreductase FAD-binding domain CJF59_02970 PF01381 Helix-turn-helix CJF59_02975 PF00144 Beta-lactamase CJF59_02980 PF13532 2OG-Fe(II) oxygenase superfamily CJF59_02990 PF00474 Sodium:solute symporter family CJF59_03005 PF03702 Anhydro-N-acetylmuramic acid kinase CJF59_03015 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CJF59_03020 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CJF59_03030 PF02556 Preprotein translocase subunit SecB CJF59_03040 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CJF59_03045 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CJF59_03070 PF00324 Amino acid permease CJF59_03075 PF04454 Encapsulating protein for peroxidase CJF59_03085 PF01654 Cytochrome bd terminal oxidase subunit I CJF59_03090 PF02322 Cytochrome bd terminal oxidase subunit II CJF59_03105 PF08946 Osmosensory transporter coiled coil CJF59_03105 PF00083 Sugar (and other) transporter CJF59_03120 PF01612 3'-5' exonuclease CJF59_03120 PF01367 5'-3' exonuclease, C-terminal SAM fold CJF59_03120 PF00476 DNA polymerase family A CJF59_03120 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CJF59_03125 PF01063 Amino-transferase class IV CJF59_03130 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CJF59_03135 PF00005 ABC transporter CJF59_03140 PF01032 FecCD transport family CJF59_03145 PF00849 RNA pseudouridylate synthase CJF59_03150 PF04545 Sigma-70, region 4 CJF59_03150 PF04542 Sigma-70 region 2 CJF59_03150 PF00140 Sigma-70 factor, region 1.2 CJF59_03155 PF17768 RecJ OB domain CJF59_03155 PF01368 DHH family CJF59_03155 PF02272 DHHA1 domain CJF59_03160 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CJF59_03165 PF03447 Homoserine dehydrogenase, NAD binding domain CJF59_03165 PF00742 Homoserine dehydrogenase CJF59_03165 PF01842 ACT domain CJF59_03170 PF00155 Aminotransferase class I and II CJF59_03180 PF00574 Clp protease CJF59_03190 PF04055 Radical SAM superfamily CJF59_03190 PF13186 Iron-sulfur cluster-binding domain CJF59_03195 PF05402 Coenzyme PQQ synthesis protein D (PqqD) CJF59_03200 PF03070 TENA/THI-4/PQQC family CJF59_03205 PF12706 Beta-lactamase superfamily domain CJF59_03210 PF08042 PqqA family CJF59_03230 PF03372 Endonuclease/Exonuclease/phosphatase family CJF59_03235 PF01521 Iron-sulphur cluster biosynthesis CJF59_03240 PF01966 HD domain CJF59_03240 PF13286 Phosphohydrolase-associated domain CJF59_03245 PF05746 DALR anticodon binding domain CJF59_03245 PF00750 tRNA synthetases class I (R) CJF59_03245 PF03485 Arginyl tRNA synthetase N terminal domain CJF59_03255 PF02616 Segregation and condensation protein ScpA CJF59_03260 PF04079 Segregation and condensation complex subunit ScpB CJF59_03265 PF02416 mttA/Hcf106 family CJF59_03270 PF00902 Sec-independent protein translocase protein (TatC) CJF59_03275 PF02403 Seryl-tRNA synthetase N-terminal domain CJF59_03275 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CJF59_03280 PF00893 Small Multidrug Resistance protein CJF59_03285 PF11412 Disulphide bond corrector protein DsbC CJF59_03285 PF13098 Thioredoxin-like domain CJF59_03285 PF02683 Cytochrome C biogenesis protein transmembrane region CJF59_03310 PF04632 Fusaric acid resistance protein family CJF59_03315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJF59_03315 PF03466 LysR substrate binding domain CJF59_03365 PF02195 ParB-like nuclease domain CJF59_03365 PF17762 HTH domain found in ParB protein CJF59_03425 PF01464 Transglycosylase SLT domain CJF59_03455 PF02534 Type IV secretory system Conjugative DNA transfer CJF59_03470 PF07733 Bacterial DNA polymerase III alpha NTPase domain CJF59_03470 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CJF59_03470 PF02811 PHP domain CJF59_03470 PF00929 Exonuclease CJF59_03470 PF14579 Helix-hairpin-helix motif CJF59_03495 PF00437 Type II/IV secretion system protein CJF59_03500 PF04956 TrbC/VIRB2 family CJF59_03530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJF59_03530 PF03466 LysR substrate binding domain CJF59_03535 PF00392 Bacterial regulatory proteins, gntR family CJF59_03535 PF07729 FCD domain CJF59_03545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJF59_03545 PF03466 LysR substrate binding domain CJF59_03560 PF13533 Biotin-lipoyl like CJF59_03565 PF02321 Outer membrane efflux protein CJF59_03575 PF07715 TonB-dependent Receptor Plug Domain CJF59_03575 PF00593 TonB dependent receptor CJF59_03580 PF02321 Outer membrane efflux protein CJF59_03585 PF13533 Biotin-lipoyl like CJF59_03590 PF07690 Major Facilitator Superfamily CJF59_03600 PF01548 Transposase CJF59_03600 PF02371 Transposase IS116/IS110/IS902 family CJF59_03605 PF03466 LysR substrate binding domain CJF59_03605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJF59_03610 PF04954 Siderophore-interacting protein CJF59_03610 PF08021 Siderophore-interacting FAD-binding domain CJF59_03665 PF00593 TonB dependent receptor CJF59_03665 PF07715 TonB-dependent Receptor Plug Domain CJF59_03680 PF01527 Transposase CJF59_03695 PF13276 HTH-like domain CJF59_03695 PF00665 Integrase core domain CJF59_03695 PF13333 Integrase core domain CJF59_03720 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CJF59_03720 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CJF59_03725 PF12833 Helix-turn-helix domain CJF59_03725 PF01965 DJ-1/PfpI family CJF59_03750 PF03472 Autoinducer binding domain CJF59_03750 PF00196 Bacterial regulatory proteins, luxR family CJF59_03770 PF01037 Lrp/AsnC ligand binding domain CJF59_03790 PF00873 AcrB/AcrD/AcrF family CJF59_03795 PF00072 Response regulator receiver domain CJF59_03795 PF00486 Transcriptional regulatory protein, C terminal CJF59_03800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJF59_03800 PF08521 Two-component sensor kinase N-terminal CJF59_03800 PF00512 His Kinase A (phospho-acceptor) domain CJF59_03830 PF00970 Oxidoreductase FAD-binding domain CJF59_03830 PF00111 2Fe-2S iron-sulfur cluster binding domain CJF59_03830 PF00175 Oxidoreductase NAD-binding domain CJF59_03865 PF06426 Serine acetyltransferase, N-terminal CJF59_03865 PF00132 Bacterial transferase hexapeptide (six repeats) CJF59_03875 PF00266 Aminotransferase class-V CJF59_03900 PF04973 Nicotinamide mononucleotide transporter CJF59_03905 PF00581 Rhodanese-like domain CJF59_03925 PF03466 LysR substrate binding domain CJF59_03925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJF59_03950 PF01850 PIN domain CJF59_03975 PF01425 Amidase CJF59_03995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJF59_03995 PF03466 LysR substrate binding domain CJF59_04000 PF05726 Pirin C-terminal cupin domain CJF59_04000 PF02678 Pirin CJF59_04005 PF03358 NADPH-dependent FMN reductase CJF59_04015 PF07690 Major Facilitator Superfamily CJF59_04020 PF00171 Aldehyde dehydrogenase family CJF59_04025 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJF59_04030 PF00440 Bacterial regulatory proteins, tetR family CJF59_04030 PF16925 Tetracyclin repressor-like, C-terminal domain CJF59_04040 PF02445 Quinolinate synthetase A protein CJF59_04045 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CJF59_04045 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CJF59_04055 PF14403 Circularly permuted ATP-grasp type 2 CJF59_04065 PF10005 zinc-ribbon domain CJF59_04065 PF15887 Putative zinc-binding metallo-peptidase CJF59_04070 PF01565 FAD binding domain CJF59_04070 PF09330 D-lactate dehydrogenase, membrane binding CJF59_04075 PF00171 Aldehyde dehydrogenase family CJF59_04160 PF03884 DNA gyrase inhibitor YacG CJF59_04170 PF02545 Maf-like protein CJF59_04175 PF01176 Translation initiation factor 1A / IF-1 CJF59_04180 PF00815 Histidinol dehydrogenase CJF59_04185 PF01634 ATP phosphoribosyltransferase CJF59_04190 PF00575 S1 RNA binding domain CJF59_04190 PF12111 Polyribonucleotide phosphorylase C terminal CJF59_04190 PF10150 Ribonuclease E/G family CJF59_04195 PF01520 N-acetylmuramoyl-L-alanine amidase CJF59_04215 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CJF59_04215 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJF59_04220 PF01493 GXGXG motif CJF59_04220 PF04898 Glutamate synthase central domain CJF59_04220 PF01645 Conserved region in glutamate synthase CJF59_04220 PF00310 Glutamine amidotransferases class-II CJF59_04230 PF03109 ABC1 family CJF59_04240 PF02401 LytB protein CJF59_04245 PF01636 Phosphotransferase enzyme family CJF59_04250 PF00075 RNase H CJF59_04265 PF01513 ATP-NAD kinase CJF59_04285 PF03129 Anticodon binding domain CJF59_04285 PF02824 TGS domain CJF59_04285 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CJF59_04285 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CJF59_04290 PF05198 Translation initiation factor IF-3, N-terminal domain CJF59_04290 PF00707 Translation initiation factor IF-3, C-terminal domain CJF59_04300 PF00512 His Kinase A (phospho-acceptor) domain CJF59_04300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJF59_04305 PF00486 Transcriptional regulatory protein, C terminal CJF59_04305 PF00072 Response regulator receiver domain CJF59_04315 PF00005 ABC transporter CJF59_04315 PF12848 ABC transporter CJF59_04320 PF00334 Nucleoside diphosphate kinase CJF59_04325 PF04055 Radical SAM superfamily CJF59_04325 PF02310 B12 binding domain CJF59_04350 PF00749 tRNA synthetases class I (E and Q), catalytic domain CJF59_04375 PF01042 Endoribonuclease L-PSP CJF59_04380 PF02569 Pantoate-beta-alanine ligase CJF59_04385 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CJF59_04385 PF07733 Bacterial DNA polymerase III alpha NTPase domain CJF59_04385 PF14579 Helix-hairpin-helix motif CJF59_04385 PF02811 PHP domain CJF59_04390 PF04715 Anthranilate synthase component I, N terminal region CJF59_04390 PF00425 chorismate binding enzyme CJF59_04395 PF01063 Amino-transferase class IV CJF59_04410 PF00355 Rieske [2Fe-2S] domain CJF59_04415 PF00318 Ribosomal protein S2 CJF59_04420 PF00889 Elongation factor TS CJF59_04425 PF02565 Recombination protein O C terminal CJF59_04425 PF11967 Recombination protein O N terminal CJF59_04430 PF03989 DNA gyrase C-terminal domain, beta-propeller CJF59_04430 PF00521 DNA gyrase/topoisomerase IV, subunit A CJF59_04435 PF04376 Arginine-tRNA-protein transferase, N terminus CJF59_04435 PF04377 Arginine-tRNA-protein transferase, C terminus CJF59_04440 PF00490 Delta-aminolevulinic acid dehydratase CJF59_04445 PF13520 Amino acid permease CJF59_04450 PF00464 Serine hydroxymethyltransferase CJF59_04470 PF00271 Helicase conserved C-terminal domain CJF59_04470 PF00270 DEAD/DEAH box helicase CJF59_04495 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CJF59_04495 PF00205 Thiamine pyrophosphate enzyme, central domain CJF59_04495 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CJF59_04500 PF10369 Small subunit of acetolactate synthase CJF59_04505 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CJF59_04505 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CJF59_04510 PF05275 Copper resistance protein B precursor (CopB) CJF59_04515 PF00394 Multicopper oxidase CJF59_04515 PF07732 Multicopper oxidase CJF59_04515 PF07731 Multicopper oxidase CJF59_04525 PF00403 Heavy-metal-associated domain CJF59_04535 PF00857 Isochorismatase family CJF59_04540 PF00749 tRNA synthetases class I (E and Q), catalytic domain CJF59_04555 PF01474 Class-II DAHP synthetase family CJF59_04565 PF01205 Uncharacterized protein family UPF0029 CJF59_04575 PF03618 Kinase/pyrophosphorylase CJF59_04580 PF00391 PEP-utilising enzyme, mobile domain CJF59_04580 PF02896 PEP-utilising enzyme, TIM barrel domain CJF59_04580 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CJF59_04585 PF12826 Helix-hairpin-helix motif CJF59_04585 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CJF59_04585 PF03120 NAD-dependent DNA ligase OB-fold domain CJF59_04585 PF01653 NAD-dependent DNA ligase adenylation domain CJF59_04585 PF00533 BRCA1 C Terminus (BRCT) domain CJF59_04590 PF02463 RecF/RecN/SMC N terminal domain CJF59_04595 PF13525 Outer membrane lipoprotein CJF59_04600 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CJF59_04605 PF00091 Tubulin/FtsZ family, GTPase domain CJF59_04605 PF12327 FtsZ family, C-terminal domain CJF59_04610 PF02491 SHS2 domain inserted in FTSA CJF59_04615 PF08478 POTRA domain, FtsQ-type CJF59_04615 PF03799 Cell division protein FtsQ CJF59_04620 PF01820 D-ala D-ala ligase N-terminus CJF59_04620 PF07478 D-ala D-ala ligase C-terminus CJF59_04625 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CJF59_04625 PF01565 FAD binding domain CJF59_04630 PF08245 Mur ligase middle domain CJF59_04630 PF02875 Mur ligase family, glutamate ligase domain CJF59_04630 PF01225 Mur ligase family, catalytic domain CJF59_04635 PF03033 Glycosyltransferase family 28 N-terminal domain CJF59_04635 PF04101 Glycosyltransferase family 28 C-terminal domain CJF59_04640 PF01098 Cell cycle protein CJF59_04645 PF02875 Mur ligase family, glutamate ligase domain CJF59_04645 PF08245 Mur ligase middle domain CJF59_04650 PF00953 Glycosyl transferase family 4 CJF59_04650 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CJF59_04655 PF08245 Mur ligase middle domain CJF59_04655 PF02875 Mur ligase family, glutamate ligase domain CJF59_04655 PF01225 Mur ligase family, catalytic domain CJF59_04660 PF02875 Mur ligase family, glutamate ligase domain CJF59_04660 PF01225 Mur ligase family, catalytic domain CJF59_04660 PF08245 Mur ligase middle domain CJF59_04665 PF00905 Penicillin binding protein transpeptidase domain CJF59_04665 PF03717 Penicillin-binding Protein dimerisation domain CJF59_04675 PF01795 MraW methylase family CJF59_04680 PF02381 MraZ protein, putative antitoxin-like CJF59_04690 PF07859 alpha/beta hydrolase fold CJF59_04700 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CJF59_04700 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CJF59_04705 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) CJF59_04715 PF01472 PUA domain CJF59_04715 PF00696 Amino acid kinase family CJF59_04720 PF01926 50S ribosome-binding GTPase CJF59_04720 PF01018 GTP1/OBG CJF59_04725 PF01016 Ribosomal L27 protein CJF59_04730 PF00829 Ribosomal prokaryotic L21 protein CJF59_04740 PF02796 Helix-turn-helix domain of resolvase CJF59_04740 PF00239 Resolvase, N terminal domain CJF59_04760 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CJF59_04770 PF07859 alpha/beta hydrolase fold CJF59_04785 PF00860 Permease family CJF59_04800 PF03358 NADPH-dependent FMN reductase CJF59_04805 PF00355 Rieske [2Fe-2S] domain CJF59_04805 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal CJF59_04810 PF00033 Cytochrome b/b6/petB CJF59_04810 PF00032 Cytochrome b(C-terminal)/b6/petD CJF59_04810 PF02167 Cytochrome C1 family CJF59_04815 PF00032 Cytochrome b(C-terminal)/b6/petD CJF59_04815 PF02167 Cytochrome C1 family CJF59_04815 PF00033 Cytochrome b/b6/petB CJF59_04820 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CJF59_04820 PF01872 RibD C-terminal domain CJF59_04825 PF00677 Lumazine binding domain CJF59_04830 PF00925 GTP cyclohydrolase II CJF59_04830 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CJF59_04835 PF00885 6,7-dimethyl-8-ribityllumazine synthase CJF59_04865 PF13533 Biotin-lipoyl like CJF59_04895 PF00994 Probable molybdopterin binding domain CJF59_04905 PF01227 GTP cyclohydrolase I CJF59_04910 PF04379 ApaG domain CJF59_04915 PF01053 Cys/Met metabolism PLP-dependent enzyme CJF59_04920 PF01050 Mannose-6-phosphate isomerase CJF59_04920 PF00483 Nucleotidyl transferase CJF59_04925 PF00293 NUDIX domain CJF59_04930 PF00355 Rieske [2Fe-2S] domain CJF59_04940 PF02699 Preprotein translocase subunit CJF59_04945 PF00270 DEAD/DEAH box helicase CJF59_04945 PF17764 3′ DNA-binding domain (3′BD) CJF59_04945 PF18074 Primosomal protein N C-terminal domain CJF59_04945 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CJF59_04950 PF00589 Phage integrase family CJF59_04950 PF02899 Phage integrase, N-terminal SAM-like domain CJF59_04955 PF00561 alpha/beta hydrolase fold CJF59_04970 PF00909 Ammonium Transporter Family CJF59_04980 PF16363 GDP-mannose 4,6 dehydratase CJF59_04985 PF01370 NAD dependent epimerase/dehydratase family CJF59_05020 PF00118 TCP-1/cpn60 chaperonin family CJF59_05025 PF00166 Chaperonin 10 Kd subunit CJF59_05030 PF01738 Dienelactone hydrolase family CJF59_05035 PF00313 'Cold-shock' DNA-binding domain CJF59_05040 PF04851 Type III restriction enzyme, res subunit CJF59_05040 PF13307 Helicase C-terminal domain CJF59_05045 PF00459 Inositol monophosphatase family CJF59_05050 PF08207 Elongation factor P (EF-P) KOW-like domain CJF59_05050 PF09285 Elongation factor P, C-terminal CJF59_05050 PF01132 Elongation factor P (EF-P) OB domain CJF59_05060 PF01050 Mannose-6-phosphate isomerase CJF59_05060 PF00483 Nucleotidyl transferase CJF59_05065 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CJF59_05065 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CJF59_05065 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CJF59_05065 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CJF59_05070 PF09335 SNARE associated Golgi protein CJF59_05075 PF01494 FAD binding domain CJF59_05080 PF00132 Bacterial transferase hexapeptide (six repeats) CJF59_05080 PF06426 Serine acetyltransferase, N-terminal CJF59_05085 PF00543 Nitrogen regulatory protein P-II CJF59_05090 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CJF59_05090 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CJF59_05090 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CJF59_05115 PF00156 Phosphoribosyl transferase domain CJF59_05140 PF03275 UDP-galactopyranose mutase CJF59_05155 PF00535 Glycosyl transferase family 2 CJF59_05160 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CJF59_05160 PF02542 YgbB family CJF59_05165 PF01207 Dihydrouridine synthase (Dus) CJF59_05170 PF00512 His Kinase A (phospho-acceptor) domain CJF59_05170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJF59_05170 PF00989 PAS fold CJF59_05175 PF02954 Bacterial regulatory protein, Fis family CJF59_05175 PF00158 Sigma-54 interaction domain CJF59_05175 PF00072 Response regulator receiver domain CJF59_05180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJF59_05180 PF00672 HAMP domain CJF59_05185 PF02954 Bacterial regulatory protein, Fis family CJF59_05185 PF00072 Response regulator receiver domain CJF59_05185 PF00158 Sigma-54 interaction domain CJF59_05190 PF17209 Hfq protein CJF59_05195 PF13167 GTP-binding GTPase N-terminal CJF59_05195 PF16360 GTP-binding GTPase Middle Region CJF59_05195 PF01926 50S ribosome-binding GTPase CJF59_05200 PF00293 NUDIX domain CJF59_05205 PF10431 C-terminal, D2-small domain, of ClpB protein CJF59_05205 PF17871 AAA lid domain CJF59_05205 PF07724 AAA domain (Cdc48 subfamily) CJF59_05205 PF00004 ATPase family associated with various cellular activities (AAA) CJF59_05205 PF02861 Clp amino terminal domain, pathogenicity island component CJF59_05210 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CJF59_05210 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CJF59_05230 PF01794 Ferric reductase like transmembrane component CJF59_05235 PF00916 Sulfate permease family CJF59_05235 PF01740 STAS domain CJF59_05240 PF02684 Lipid-A-disaccharide synthetase CJF59_05245 PF01502 Phosphoribosyl-AMP cyclohydrolase CJF59_05255 PF00733 Asparagine synthase CJF59_05255 PF13537 Glutamine amidotransferase domain CJF59_05260 PF13439 Glycosyltransferase Family 4 CJF59_05260 PF00534 Glycosyl transferases group 1 CJF59_05280 PF13360 PQQ-like domain CJF59_05285 PF01926 50S ribosome-binding GTPase CJF59_05285 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CJF59_05290 PF07690 Major Facilitator Superfamily CJF59_05295 PF04107 Glutamate-cysteine ligase family 2(GCS2) CJF59_05300 PF04452 RNA methyltransferase CJF59_05305 PF01040 UbiA prenyltransferase family CJF59_05315 PF12002 MgsA AAA+ ATPase C terminal CJF59_05315 PF00004 ATPase family associated with various cellular activities (AAA) CJF59_05315 PF16193 AAA C-terminal domain CJF59_05320 PF00849 RNA pseudouridylate synthase CJF59_05320 PF01479 S4 domain CJF59_05340 PF02978 Signal peptide binding domain CJF59_05340 PF00448 SRP54-type protein, GTPase domain CJF59_05340 PF02881 SRP54-type protein, helical bundle domain CJF59_05345 PF00886 Ribosomal protein S16 CJF59_05350 PF01782 RimM N-terminal domain CJF59_05355 PF01746 tRNA (Guanine-1)-methyltransferase CJF59_05360 PF01245 Ribosomal protein L19 CJF59_05365 PF00330 Aconitase family (aconitate hydratase) CJF59_05370 PF00694 Aconitase C-terminal domain CJF59_05375 PF00180 Isocitrate/isopropylmalate dehydrogenase CJF59_05380 PF01165 Ribosomal protein S21 CJF59_05385 PF01327 Polypeptide deformylase CJF59_05395 PF12802 MarR family CJF59_05400 PF00486 Transcriptional regulatory protein, C terminal CJF59_05400 PF00072 Response regulator receiver domain CJF59_05405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJF59_05405 PF00672 HAMP domain CJF59_05405 PF00512 His Kinase A (phospho-acceptor) domain CJF59_05420 PF01783 Ribosomal L32p protein family CJF59_05425 PF02504 Fatty acid synthesis protein CJF59_05430 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CJF59_05430 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CJF59_05435 PF00216 Bacterial DNA-binding protein CJF59_05440 PF13411 MerR HTH family regulatory protein CJF59_05455 PF03023 Lipid II flippase MurJ CJF59_05465 PF00216 Bacterial DNA-binding protein CJF59_05470 PF05443 ROS/MUCR transcriptional regulator protein CJF59_05475 PF03466 LysR substrate binding domain CJF59_05475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJF59_05480 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJF59_05485 PF01037 Lrp/AsnC ligand binding domain CJF59_05490 PF00535 Glycosyl transferase family 2 CJF59_05500 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CJF59_05500 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CJF59_05510 PF01209 ubiE/COQ5 methyltransferase family CJF59_05515 PF00115 Cytochrome C and Quinol oxidase polypeptide I CJF59_05520 PF01040 UbiA prenyltransferase family CJF59_05535 PF01523 Putative modulator of DNA gyrase CJF59_05540 PF05193 Peptidase M16 inactive domain CJF59_05540 PF00675 Insulinase (Peptidase family M16) CJF59_05545 PF14821 Threonine synthase N terminus CJF59_05545 PF00291 Pyridoxal-phosphate dependent enzyme CJF59_05555 PF02074 Carboxypeptidase Taq (M32) metallopeptidase CJF59_05565 PF05190 MutS family domain IV CJF59_05565 PF00488 MutS domain V CJF59_05565 PF05192 MutS domain III CJF59_05565 PF05188 MutS domain II CJF59_05565 PF01624 MutS domain I CJF59_05570 PF08335 GlnD PII-uridylyltransferase CJF59_05570 PF01966 HD domain CJF59_05580 PF00005 ABC transporter CJF59_05580 PF00664 ABC transporter transmembrane region CJF59_05590 PF00830 Ribosomal L28 family CJF59_05595 PF03144 Elongation factor Tu domain 2 CJF59_05595 PF00679 Elongation factor G C-terminus CJF59_05595 PF14492 Elongation Factor G, domain II CJF59_05595 PF03764 Elongation factor G, domain IV CJF59_05595 PF00009 Elongation factor Tu GTP binding domain CJF59_05605 PF00311 Phosphoenolpyruvate carboxylase CJF59_05610 PF04286 Protein of unknown function (DUF445) CJF59_05620 PF01458 Uncharacterized protein family (UPF0051) CJF59_05625 PF00005 ABC transporter CJF59_05630 PF01458 Uncharacterized protein family (UPF0051) CJF59_05635 PF00266 Aminotransferase class-V CJF59_05645 PF01883 Iron-sulfur cluster assembly protein CJF59_05650 PF01521 Iron-sulphur cluster biosynthesis CJF59_05655 PF05958 tRNA (Uracil-5-)-methyltransferase CJF59_05660 PF00271 Helicase conserved C-terminal domain CJF59_05660 PF00270 DEAD/DEAH box helicase CJF59_05670 PF01256 Carbohydrate kinase CJF59_05670 PF03853 YjeF-related protein N-terminus CJF59_05680 PF05697 Bacterial trigger factor protein (TF) CJF59_05680 PF05698 Bacterial trigger factor protein (TF) C-terminus CJF59_05680 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CJF59_05685 PF00574 Clp protease CJF59_05690 PF07724 AAA domain (Cdc48 subfamily) CJF59_05690 PF06689 ClpX C4-type zinc finger CJF59_05690 PF10431 C-terminal, D2-small domain, of ClpB protein CJF59_05695 PF05362 Lon protease (S16) C-terminal proteolytic domain CJF59_05695 PF02190 ATP-dependent protease La (LON) substrate-binding domain CJF59_05695 PF00004 ATPase family associated with various cellular activities (AAA) CJF59_05700 PF00216 Bacterial DNA-binding protein CJF59_05710 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CJF59_05715 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CJF59_05720 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CJF59_05725 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CJF59_05735 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CJF59_05735 PF10531 SLBB domain CJF59_05735 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CJF59_05740 PF00384 Molybdopterin oxidoreductase CJF59_05740 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CJF59_05740 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal CJF59_05745 PF00146 NADH dehydrogenase CJF59_05750 PF12838 4Fe-4S dicluster domain CJF59_05755 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CJF59_05760 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CJF59_05765 PF00361 Proton-conducting membrane transporter CJF59_05765 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CJF59_05770 PF00361 Proton-conducting membrane transporter CJF59_05775 PF03099 Biotin/lipoate A/B protein ligase family CJF59_05775 PF02237 Biotin protein ligase C terminal domain CJF59_05780 PF03309 Type III pantothenate kinase CJF59_05785 PF17770 Ribonuclease J C-terminal domain CJF59_05785 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CJF59_05785 PF12706 Beta-lactamase superfamily domain CJF59_05790 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CJF59_05790 PF03129 Anticodon binding domain CJF59_05795 PF12704 MacB-like periplasmic core domain CJF59_05795 PF02687 FtsX-like permease family CJF59_05800 PF00005 ABC transporter CJF59_05805 PF00255 Glutathione peroxidase CJF59_05820 PF01380 SIS domain CJF59_05825 PF00132 Bacterial transferase hexapeptide (six repeats) CJF59_05825 PF14602 Hexapeptide repeat of succinyl-transferase CJF59_05825 PF12804 MobA-like NTP transferase domain CJF59_05830 PF13419 Haloacid dehalogenase-like hydrolase CJF59_05855 PF00149 Calcineurin-like phosphoesterase CJF59_05870 PF00155 Aminotransferase class I and II CJF59_05880 PF00501 AMP-binding enzyme CJF59_05920 PF01799 [2Fe-2S] binding domain CJF59_05920 PF00111 2Fe-2S iron-sulfur cluster binding domain CJF59_05935 PF00248 Aldo/keto reductase family CJF59_05940 PF00248 Aldo/keto reductase family CJF59_05945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJF59_05945 PF03466 LysR substrate binding domain CJF59_05950 PF03358 NADPH-dependent FMN reductase CJF59_05960 PF07690 Major Facilitator Superfamily CJF59_05965 PF00106 short chain dehydrogenase CJF59_05970 PF04237 YjbR CJF59_05980 PF07690 Major Facilitator Superfamily CJF59_05985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJF59_05985 PF03466 LysR substrate binding domain CJF59_05990 PF09278 MerR, DNA binding CJF59_05990 PF00376 MerR family regulatory protein CJF59_06000 PF00873 AcrB/AcrD/AcrF family CJF59_06010 PF02321 Outer membrane efflux protein CJF59_06030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJF59_06030 PF03466 LysR substrate binding domain CJF59_06035 PF02219 Methylenetetrahydrofolate reductase CJF59_06040 PF02677 Epoxyqueuosine reductase QueH CJF59_06045 PF08267 Cobalamin-independent synthase, N-terminal domain CJF59_06045 PF01717 Cobalamin-independent synthase, Catalytic domain CJF59_06070 PF00270 DEAD/DEAH box helicase CJF59_06070 PF18019 HD domain CJF59_06070 PF00271 Helicase conserved C-terminal domain CJF59_06085 PF09344 CT1975-like protein CJF59_06090 PF09704 CRISPR-associated protein (Cas_Cas5) CJF59_06100 PF01867 CRISPR associated protein Cas1 CJF59_06105 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) CJF59_06110 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CJF59_06125 PF07690 Major Facilitator Superfamily CJF59_06140 PF00107 Zinc-binding dehydrogenase CJF59_06140 PF08240 Alcohol dehydrogenase GroES-like domain CJF59_06145 PF00593 TonB dependent receptor CJF59_06145 PF07715 TonB-dependent Receptor Plug Domain CJF59_06155 PF12848 ABC transporter CJF59_06155 PF00005 ABC transporter CJF59_06170 PF02080 TrkA-C domain CJF59_06170 PF06826 Predicted Permease Membrane Region CJF59_06175 PF00155 Aminotransferase class I and II CJF59_06180 PF00710 Asparaginase, N-terminal CJF59_06180 PF17763 Glutaminase/Asparaginase C-terminal domain CJF59_06195 PF07715 TonB-dependent Receptor Plug Domain CJF59_06195 PF00593 TonB dependent receptor CJF59_06200 PF18331 PKHD-type hydroxylase C-terminal domain CJF59_06200 PF13640 2OG-Fe(II) oxygenase superfamily CJF59_06205 PF00664 ABC transporter transmembrane region CJF59_06205 PF00005 ABC transporter CJF59_06210 PF00664 ABC transporter transmembrane region CJF59_06210 PF00005 ABC transporter CJF59_06215 PF01654 Cytochrome bd terminal oxidase subunit I CJF59_06220 PF02322 Cytochrome bd terminal oxidase subunit II CJF59_06230 PF07995 Glucose / Sorbosone dehydrogenase CJF59_06235 PF05552 Conserved TM helix CJF59_06235 PF00924 Mechanosensitive ion channel CJF59_06240 PF07715 TonB-dependent Receptor Plug Domain CJF59_06240 PF00593 TonB dependent receptor CJF59_06250 PF04055 Radical SAM superfamily CJF59_06250 PF13282 Domain of unknown function (DUF4070) CJF59_06250 PF02310 B12 binding domain CJF59_06260 PF03551 Transcriptional regulator PadR-like family CJF59_06280 PF05506 Domain of unknown function (DUF756) CJF59_06280 PF04185 Phosphoesterase family CJF59_06290 PF01569 PAP2 superfamily CJF59_06295 PF03060 Nitronate monooxygenase CJF59_06300 PF00005 ABC transporter CJF59_06300 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CJF59_06305 PF00005 ABC transporter CJF59_06305 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CJF59_06310 PF00528 Binding-protein-dependent transport system inner membrane component CJF59_06320 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CJF59_06325 PF00478 IMP dehydrogenase / GMP reductase domain CJF59_06325 PF00571 CBS domain CJF59_06330 PF01189 16S rRNA methyltransferase RsmB/F CJF59_06330 PF01029 NusB family CJF59_06345 PF00072 Response regulator receiver domain CJF59_06345 PF00486 Transcriptional regulatory protein, C terminal CJF59_06360 PF00579 tRNA synthetases class I (W and Y) CJF59_06370 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CJF59_06370 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CJF59_06375 PF00764 Arginosuccinate synthase CJF59_06380 PF04055 Radical SAM superfamily CJF59_06390 PF01479 S4 domain CJF59_06390 PF01728 FtsJ-like methyltransferase CJF59_06395 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CJF59_06395 PF02779 Transketolase, pyrimidine binding domain CJF59_06395 PF02780 Transketolase, C-terminal domain CJF59_06400 PF00348 Polyprenyl synthetase CJF59_06405 PF02609 Exonuclease VII small subunit CJF59_06410 PF01206 Sulfurtransferase TusA CJF59_06415 PF00480 ROK family CJF59_06420 PF01728 FtsJ-like methyltransferase CJF59_06425 PF02541 Ppx/GppA phosphatase family CJF59_06435 PF01568 Molydopterin dinucleotide binding domain CJF59_06435 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CJF59_06435 PF00384 Molybdopterin oxidoreductase CJF59_06440 PF13247 4Fe-4S dicluster domain CJF59_06440 PF09163 Formate dehydrogenase N, transmembrane CJF59_06445 PF01292 Prokaryotic cytochrome b561 CJF59_06450 PF04216 Protein involved in formate dehydrogenase formation CJF59_06455 PF03454 MoeA C-terminal region (domain IV) CJF59_06455 PF03453 MoeA N-terminal region (domain I and II) CJF59_06455 PF00994 Probable molybdopterin binding domain CJF59_06460 PF03205 Molybdopterin guanine dinucleotide synthesis protein B CJF59_06465 PF12804 MobA-like NTP transferase domain CJF59_06470 PF02634 FdhD/NarQ family CJF59_06475 PF14497 Glutathione S-transferase, C-terminal domain CJF59_06475 PF02798 Glutathione S-transferase, N-terminal domain CJF59_06480 PF02659 Putative manganese efflux pump CJF59_06490 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CJF59_06490 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJF59_06500 PF01180 Dihydroorotate dehydrogenase CJF59_06505 PF01515 Phosphate acetyl/butaryl transferase CJF59_06510 PF00871 Acetokinase family CJF59_06520 PF01594 AI-2E family transporter CJF59_06560 PF01011 PQQ enzyme repeat CJF59_06570 PF00158 Sigma-54 interaction domain CJF59_06570 PF02954 Bacterial regulatory protein, Fis family CJF59_06570 PF06505 Activator of aromatic catabolism CJF59_06570 PF02830 V4R domain CJF59_06580 PF10415 Fumarase C C-terminus CJF59_06580 PF00206 Lyase CJF59_06590 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CJF59_06595 PF02570 Precorrin-8X methylmutase CJF59_06600 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CJF59_06605 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CJF59_06610 PF02571 Precorrin-6x reductase CbiJ/CobK CJF59_06615 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CJF59_06625 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CJF59_06630 PF01888 CbiD CJF59_06635 PF07690 Major Facilitator Superfamily CJF59_06640 PF13417 Glutathione S-transferase, N-terminal domain CJF59_06640 PF04399 Glutaredoxin 2, C terminal domain CJF59_06645 PF05724 Thiopurine S-methyltransferase (TPMT) CJF59_06650 PF00375 Sodium:dicarboxylate symporter family CJF59_06655 PF17755 UvrA DNA-binding domain CJF59_06690 PF02069 Prokaryotic metallothionein CJF59_06695 PF01022 Bacterial regulatory protein, arsR family CJF59_06700 PF06472 ABC transporter transmembrane region 2 CJF59_06700 PF00005 ABC transporter CJF59_06705 PF02824 TGS domain CJF59_06705 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CJF59_06705 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CJF59_06705 PF03129 Anticodon binding domain CJF59_06710 PF01475 Ferric uptake regulator family CJF59_06725 PF01502 Phosphoribosyl-AMP cyclohydrolase CJF59_06730 PF02492 CobW/HypB/UreG, nucleotide-binding domain CJF59_06730 PF07683 Cobalamin synthesis protein cobW C-terminal domain CJF59_06735 PF00107 Zinc-binding dehydrogenase CJF59_06735 PF08240 Alcohol dehydrogenase GroES-like domain CJF59_06740 PF00132 Bacterial transferase hexapeptide (six repeats) CJF59_06765 PF03466 LysR substrate binding domain CJF59_06765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJF59_06770 PF00440 Bacterial regulatory proteins, tetR family CJF59_06775 PF00248 Aldo/keto reductase family CJF59_06800 PF07690 Major Facilitator Superfamily CJF59_06810 PF00593 TonB dependent receptor CJF59_06810 PF07715 TonB-dependent Receptor Plug Domain CJF59_06820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJF59_06820 PF03466 LysR substrate binding domain CJF59_06845 PF07690 Major Facilitator Superfamily CJF59_06855 PF12833 Helix-turn-helix domain CJF59_06855 PF01965 DJ-1/PfpI family CJF59_06865 PF06832 Penicillin-Binding Protein C-terminus Family CJF59_06865 PF00912 Transglycosylase CJF59_06865 PF00905 Penicillin binding protein transpeptidase domain CJF59_06870 PF11974 Bacterial alpha-2-macroglobulin MG3 domain CJF59_06870 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain CJF59_06870 PF00207 Alpha-2-macroglobulin family CJF59_06870 PF17962 Bacterial macroglobulin domain 6 CJF59_06870 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain CJF59_06870 PF07703 Alpha-2-macroglobulin bait region domain CJF59_06870 PF07678 A-macroglobulin TED domain CJF59_06870 PF01835 MG2 domain CJF59_06870 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain CJF59_06900 PF07859 alpha/beta hydrolase fold CJF59_06915 PF00593 TonB dependent receptor CJF59_06915 PF07715 TonB-dependent Receptor Plug Domain CJF59_06940 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CJF59_06950 PF00528 Binding-protein-dependent transport system inner membrane component CJF59_06955 PF00005 ABC transporter CJF59_06960 PF09084 NMT1/THI5 like CJF59_06965 PF04542 Sigma-70 region 2 CJF59_06965 PF04539 Sigma-70 region 3 CJF59_06965 PF04545 Sigma-70, region 4 CJF59_06975 PF07715 TonB-dependent Receptor Plug Domain CJF59_06975 PF00593 TonB dependent receptor CJF59_06990 PF07715 TonB-dependent Receptor Plug Domain CJF59_06990 PF00593 TonB dependent receptor CJF59_07005 PF01618 MotA/TolQ/ExbB proton channel family CJF59_07010 PF02472 Biopolymer transport protein ExbD/TolR CJF59_07025 PF01566 Natural resistance-associated macrophage protein CJF59_07030 PF02742 Iron dependent repressor, metal binding and dimerisation domain CJF59_07030 PF01325 Iron dependent repressor, N-terminal DNA binding domain CJF59_07040 PF01497 Periplasmic binding protein CJF59_07045 PF01032 FecCD transport family CJF59_07050 PF00005 ABC transporter CJF59_07060 PF01126 Heme oxygenase CJF59_07065 PF00593 TonB dependent receptor CJF59_07065 PF07715 TonB-dependent Receptor Plug Domain CJF59_07070 PF00881 Nitroreductase family CJF59_07075 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJF59_07075 PF02770 Acyl-CoA dehydrogenase, middle domain CJF59_07075 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJF59_07085 PF00296 Luciferase-like monooxygenase CJF59_07090 PF13086 AAA domain CJF59_07090 PF13086 AAA domain CJF59_07090 PF13087 AAA domain CJF59_07090 PF13195 Protein of unknown function (DUF4011) CJF59_07090 PF13195 Protein of unknown function (DUF4011) CJF59_07090 PF13087 AAA domain CJF59_07095 PF07859 alpha/beta hydrolase fold CJF59_07100 PF01425 Amidase CJF59_07105 PF00289 Biotin carboxylase, N-terminal domain CJF59_07105 PF02785 Biotin carboxylase C-terminal domain CJF59_07105 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CJF59_07105 PF00364 Biotin-requiring enzyme CJF59_07110 PF09347 Domain of unknown function (DUF1989) CJF59_07115 PF09347 Domain of unknown function (DUF1989) CJF59_07120 PF01402 Ribbon-helix-helix protein, copG family CJF59_07120 PF08753 NikR C terminal nickel binding domain CJF59_07125 PF00005 ABC transporter CJF59_07130 PF00528 Binding-protein-dependent transport system inner membrane component CJF59_07140 PF13382 Adenine deaminase C-terminal domain CJF59_07140 PF01979 Amidohydrolase family CJF59_07145 PF07690 Major Facilitator Superfamily CJF59_07185 PF00873 AcrB/AcrD/AcrF family CJF59_07190 PF02321 Outer membrane efflux protein CJF59_07195 PF00012 Hsp70 protein CJF59_07210 PF06472 ABC transporter transmembrane region 2 CJF59_07210 PF00005 ABC transporter CJF59_07215 PF07715 TonB-dependent Receptor Plug Domain CJF59_07215 PF00593 TonB dependent receptor CJF59_07230 PF08543 Phosphomethylpyrimidine kinase CJF59_07235 PF00583 Acetyltransferase (GNAT) family CJF59_07240 PF13382 Adenine deaminase C-terminal domain CJF59_07240 PF01979 Amidohydrolase family CJF59_07245 PF10091 Putative glucoamylase CJF59_07245 PF06165 Glycosyltransferase family 36 CJF59_07245 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain CJF59_07255 PF00472 RF-1 domain CJF59_07260 PF00199 Catalase CJF59_07260 PF06628 Catalase-related immune-responsive CJF59_07260 PF18011 C-terminal domain found in long catalases CJF59_07265 PF06965 Na+/H+ antiporter 1 CJF59_07285 PF13249 Squalene-hopene cyclase N-terminal domain CJF59_07285 PF13243 Squalene-hopene cyclase C-terminal domain CJF59_07305 PF00005 ABC transporter CJF59_07310 PF13533 Biotin-lipoyl like CJF59_07330 PF01618 MotA/TolQ/ExbB proton channel family CJF59_07335 PF02472 Biopolymer transport protein ExbD/TolR CJF59_07340 PF02472 Biopolymer transport protein ExbD/TolR CJF59_07350 PF01979 Amidohydrolase family CJF59_07360 PF13454 FAD-NAD(P)-binding CJF59_07375 PF00576 HIUase/Transthyretin family CJF59_07380 PF00860 Permease family CJF59_07385 PF01799 [2Fe-2S] binding domain CJF59_07385 PF00111 2Fe-2S iron-sulfur cluster binding domain CJF59_07390 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CJF59_07390 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CJF59_07400 PF01425 Amidase CJF59_07415 PF00266 Aminotransferase class-V CJF59_07420 PF07687 Peptidase dimerisation domain CJF59_07420 PF01546 Peptidase family M20/M25/M40 CJF59_07425 PF07715 TonB-dependent Receptor Plug Domain CJF59_07425 PF00593 TonB dependent receptor CJF59_07430 PF01979 Amidohydrolase family CJF59_07445 PF00005 ABC transporter CJF59_07460 PF01979 Amidohydrolase family CJF59_07465 PF02567 Phenazine biosynthesis-like protein CJF59_07480 PF03831 PhnA domain CJF59_07480 PF08274 PhnA Zinc-Ribbon CJF59_07485 PF08240 Alcohol dehydrogenase GroES-like domain CJF59_07485 PF00107 Zinc-binding dehydrogenase CJF59_07490 PF01204 Trehalase CJF59_07500 PF00072 Response regulator receiver domain CJF59_07505 PF08281 Sigma-70, region 4 CJF59_07505 PF04542 Sigma-70 region 2 CJF59_07510 PF04542 Sigma-70 region 2 CJF59_07510 PF08281 Sigma-70, region 4 CJF59_07520 PF07568 Histidine kinase CJF59_07520 PF12282 Signal transduction histidine kinase CJF59_07520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJF59_07525 PF00664 ABC transporter transmembrane region CJF59_07525 PF00005 ABC transporter CJF59_07530 PF00005 ABC transporter CJF59_07530 PF00664 ABC transporter transmembrane region CJF59_07540 PF16124 RecQ zinc-binding CJF59_07540 PF09382 RQC domain CJF59_07540 PF00270 DEAD/DEAH box helicase CJF59_07540 PF00271 Helicase conserved C-terminal domain CJF59_07540 PF00570 HRDC domain CJF59_07545 PF00455 DeoR C terminal sensor domain CJF59_07545 PF08220 DeoR-like helix-turn-helix domain CJF59_07550 PF01266 FAD dependent oxidoreductase CJF59_07550 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CJF59_07555 PF00230 Major intrinsic protein CJF59_07560 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CJF59_07560 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CJF59_07570 PF03477 ATP cone domain CJF59_07575 PF01029 NusB family CJF59_07580 PF00586 AIR synthase related protein, N-terminal domain CJF59_07580 PF02769 AIR synthase related protein, C-terminal domain CJF59_07620 PF02321 Outer membrane efflux protein CJF59_07630 PF08264 Anticodon-binding domain of tRNA CJF59_07630 PF00133 tRNA synthetases class I (I, L, M and V) CJF59_07630 PF10458 Valyl tRNA synthetase tRNA binding arm CJF59_07635 PF01625 Peptide methionine sulfoxide reductase CJF59_07640 PF00005 ABC transporter CJF59_07645 PF00528 Binding-protein-dependent transport system inner membrane component CJF59_07650 PF00692 dUTPase CJF59_07655 PF04127 DNA / pantothenate metabolism flavoprotein CJF59_07655 PF02441 Flavoprotein CJF59_07660 PF01209 ubiE/COQ5 methyltransferase family CJF59_07665 PF06827 Zinc finger found in FPG and IleRS CJF59_07665 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CJF59_07665 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CJF59_07670 PF01649 Ribosomal protein S20 CJF59_07675 PF08299 Bacterial dnaA protein helix-turn-helix CJF59_07675 PF11638 DnaA N-terminal domain CJF59_07675 PF00308 Bacterial dnaA protein CJF59_07680 PF00712 DNA polymerase III beta subunit, N-terminal domain CJF59_07680 PF02767 DNA polymerase III beta subunit, central domain CJF59_07680 PF02768 DNA polymerase III beta subunit, C-terminal domain CJF59_07685 PF02463 RecF/RecN/SMC N terminal domain CJF59_07690 PF00204 DNA gyrase B CJF59_07690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJF59_07690 PF00986 DNA gyrase B subunit, carboxyl terminus CJF59_07690 PF01751 Toprim domain CJF59_07695 PF00793 DAHP synthetase I family CJF59_07700 PF06418 CTP synthase N-terminus CJF59_07700 PF00117 Glutamine amidotransferase class-I CJF59_07710 PF00121 Triosephosphate isomerase CJF59_07720 PF04715 Anthranilate synthase component I, N terminal region CJF59_07720 PF00425 chorismate binding enzyme CJF59_07725 PF00117 Glutamine amidotransferase class-I CJF59_07730 PF00591 Glycosyl transferase family, a/b domain CJF59_07730 PF02885 Glycosyl transferase family, helical bundle domain CJF59_07735 PF00218 Indole-3-glycerol phosphate synthase CJF59_07740 PF01967 MoaC family CJF59_07745 PF00676 Dehydrogenase E1 component CJF59_07750 PF00364 Biotin-requiring enzyme CJF59_07750 PF02779 Transketolase, pyrimidine binding domain CJF59_07750 PF02780 Transketolase, C-terminal domain CJF59_07755 PF00364 Biotin-requiring enzyme CJF59_07755 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CJF59_07755 PF02817 e3 binding domain CJF59_07760 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CJF59_07760 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJF59_07765 PF04055 Radical SAM superfamily CJF59_07780 PF02464 Competence-damaged protein CJF59_07790 PF01464 Transglycosylase SLT domain CJF59_07790 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain CJF59_07795 PF03741 Integral membrane protein TerC family CJF59_07800 PF10397 Adenylosuccinate lyase C-terminus CJF59_07800 PF00206 Lyase CJF59_07805 PF01259 SAICAR synthetase CJF59_07810 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase CJF59_07825 PF02769 AIR synthase related protein, C-terminal domain CJF59_07825 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CJF59_07825 PF00586 AIR synthase related protein, N-terminal domain CJF59_07830 PF01722 BolA-like protein CJF59_07835 PF00462 Glutaredoxin CJF59_07845 PF02021 Uncharacterised protein family UPF0102 CJF59_07865 PF00581 Rhodanese-like domain CJF59_07870 PF01053 Cys/Met metabolism PLP-dependent enzyme CJF59_07875 PF13335 Magnesium chelatase, subunit ChlI C-terminal CJF59_07875 PF01078 Magnesium chelatase, subunit ChlI CJF59_07880 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CJF59_07880 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CJF59_07885 PF00459 Inositol monophosphatase family CJF59_07890 PF00034 Cytochrome c CJF59_07895 PF02348 Cytidylyltransferase CJF59_07900 PF00800 Prephenate dehydratase CJF59_07900 PF01817 Chorismate mutase type II CJF59_07900 PF01842 ACT domain CJF59_07905 PF00701 Dihydrodipicolinate synthetase family CJF59_07910 PF01668 SmpB protein CJF59_07915 PF00313 'Cold-shock' DNA-binding domain CJF59_07945 PF00698 Acyl transferase domain CJF59_07955 PF00550 Phosphopantetheine attachment site CJF59_07960 PF00109 Beta-ketoacyl synthase, N-terminal domain CJF59_07960 PF02801 Beta-ketoacyl synthase, C-terminal domain CJF59_07965 PF02618 YceG-like family CJF59_07975 PF00459 Inositol monophosphatase family CJF59_07985 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CJF59_07990 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CJF59_08000 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CJF59_08000 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CJF59_08010 PF00009 Elongation factor Tu GTP binding domain CJF59_08015 PF01507 Phosphoadenosine phosphosulfate reductase family CJF59_08020 PF01507 Phosphoadenosine phosphosulfate reductase family CJF59_08030 PF04055 Radical SAM superfamily CJF59_08030 PF06968 Biotin and Thiamin Synthesis associated domain CJF59_08040 PF06508 Queuosine biosynthesis protein QueC CJF59_08050 PF06039 Malate:quinone oxidoreductase (Mqo) CJF59_08055 PF02566 OsmC-like protein CJF59_08060 PF01264 Chorismate synthase CJF59_08070 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CJF59_08070 PF01243 Pyridoxamine 5'-phosphate oxidase CJF59_08085 PF01026 TatD related DNase CJF59_08090 PF09334 tRNA synthetases class I (M) CJF59_08090 PF08264 Anticodon-binding domain of tRNA CJF59_08100 PF02223 Thymidylate kinase CJF59_08105 PF07943 Penicillin-binding protein 5, C-terminal domain CJF59_08105 PF00768 D-alanyl-D-alanine carboxypeptidase CJF59_08110 PF05036 Sporulation related domain CJF59_08110 PF03330 Lytic transglycolase CJF59_08115 PF13406 Transglycosylase SLT domain CJF59_08130 PF13520 Amino acid permease CJF59_08135 PF02673 Bacitracin resistance protein BacA CJF59_08160 PF13847 Methyltransferase domain CJF59_08160 PF17827 PrmC N-terminal domain CJF59_08170 PF03462 PCRF domain CJF59_08170 PF00472 RF-1 domain CJF59_08175 PF03129 Anticodon binding domain CJF59_08175 PF13393 Histidyl-tRNA synthetase CJF59_08180 PF04551 GcpE protein CJF59_08190 PF03060 Nitronate monooxygenase CJF59_08195 PF13840 ACT domain CJF59_08195 PF01842 ACT domain CJF59_08195 PF00696 Amino acid kinase family CJF59_08205 PF10282 Lactonase, 7-bladed beta-propeller CJF59_08220 PF00462 Glutaredoxin CJF59_08230 PF08241 Methyltransferase domain CJF59_08235 PF06463 Molybdenum Cofactor Synthesis C CJF59_08235 PF04055 Radical SAM superfamily CJF59_08240 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CJF59_08240 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CJF59_08240 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CJF59_08240 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CJF59_08245 PF00483 Nucleotidyl transferase CJF59_08255 PF03099 Biotin/lipoate A/B protein ligase family CJF59_08265 PF01722 BolA-like protein CJF59_08270 PF00226 DnaJ domain CJF59_08270 PF01556 DnaJ C terminal domain CJF59_08270 PF00684 DnaJ central domain CJF59_08275 PF07728 AAA domain (dynein-related subfamily) CJF59_08275 PF08406 CbbQ/NirQ/NorQ C-terminal CJF59_08275 PF12556 Cobaltochelatase CobS subunit N terminal CJF59_08280 PF11775 Cobalamin biosynthesis protein CobT VWA domain CJF59_08280 PF06213 Cobalamin biosynthesis protein CobT CJF59_08285 PF00282 Pyridoxal-dependent decarboxylase conserved domain CJF59_08290 PF13593 SBF-like CPA transporter family (DUF4137) CJF59_08300 PF00270 DEAD/DEAH box helicase CJF59_08300 PF02559 CarD-like/TRCF domain CJF59_08300 PF03461 TRCF domain CJF59_08300 PF17757 UvrB interaction domain CJF59_08300 PF00271 Helicase conserved C-terminal domain CJF59_08305 PF03937 Flavinator of succinate dehydrogenase CJF59_08310 PF00270 DEAD/DEAH box helicase CJF59_08310 PF00271 Helicase conserved C-terminal domain CJF59_08310 PF17191 RecG wedge domain CJF59_08315 PF02581 Thiamine monophosphate synthase CJF59_08320 PF05690 Thiazole biosynthesis protein ThiG CJF59_08330 PF01266 FAD dependent oxidoreductase CJF59_08340 PF03952 Enolase, N-terminal domain CJF59_08340 PF00113 Enolase, C-terminal TIM barrel domain CJF59_08350 PF00471 Ribosomal protein L33 CJF59_08355 PF00994 Probable molybdopterin binding domain CJF59_08355 PF03454 MoeA C-terminal region (domain IV) CJF59_08355 PF03453 MoeA N-terminal region (domain I and II) CJF59_08360 PF00717 Peptidase S24-like CJF59_08360 PF01726 LexA DNA binding domain CJF59_08365 PF13649 Methyltransferase domain CJF59_08375 PF00155 Aminotransferase class I and II CJF59_08380 PF00202 Aminotransferase class-III CJF59_08385 PF02391 MoaE protein CJF59_08390 PF02597 ThiS family CJF59_08400 PF01066 CDP-alcohol phosphatidyltransferase CJF59_08405 PF12826 Helix-hairpin-helix motif CJF59_08405 PF01541 GIY-YIG catalytic domain CJF59_08405 PF02151 UvrB/uvrC motif CJF59_08405 PF08459 UvrC Helix-hairpin-helix N-terminal CJF59_08410 PF01244 Membrane dipeptidase (Peptidase family M19) CJF59_08425 PF17243 POTRA domain TamA domain 1 CJF59_08425 PF07244 Surface antigen variable number repeat CJF59_08425 PF01103 Surface antigen CJF59_08435 PF00919 Uncharacterized protein family UPF0004 CJF59_08435 PF01938 TRAM domain CJF59_08435 PF04055 Radical SAM superfamily CJF59_08440 PF02562 PhoH-like protein CJF59_08445 PF02130 Uncharacterized protein family UPF0054 CJF59_08450 PF03471 Transporter associated domain CJF59_08450 PF00571 CBS domain CJF59_08455 PF13462 Thioredoxin CJF59_08460 PF02463 RecF/RecN/SMC N terminal domain CJF59_08470 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CJF59_08470 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CJF59_08485 PF01817 Chorismate mutase type II CJF59_08485 PF02153 Prephenate dehydrogenase CJF59_08495 PF00285 Citrate synthase, C-terminal domain CJF59_08505 PF00156 Phosphoribosyl transferase domain CJF59_08510 PF01177 Asp/Glu/Hydantoin racemase CJF59_08515 PF00348 Polyprenyl synthetase CJF59_08525 PF00268 Ribonucleotide reductase, small chain CJF59_08530 PF03477 ATP cone domain CJF59_08530 PF02867 Ribonucleotide reductase, barrel domain CJF59_08530 PF00317 Ribonucleotide reductase, all-alpha domain CJF59_08535 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CJF59_08535 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CJF59_08540 PF07549 SecD/SecF GG Motif CJF59_08540 PF02355 Protein export membrane protein CJF59_08545 PF07549 SecD/SecF GG Motif CJF59_08545 PF02355 Protein export membrane protein CJF59_08555 PF01741 Large-conductance mechanosensitive channel, MscL CJF59_08560 PF01197 Ribosomal protein L31 CJF59_08565 PF00011 Hsp20/alpha crystallin family CJF59_08585 PF00731 AIR carboxylase CJF59_08590 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CJF59_08590 PF02222 ATP-grasp domain CJF59_08595 PF04002 RadC-like JAB domain CJF59_08600 PF04002 RadC-like JAB domain CJF59_08605 PF13361 UvrD-like helicase C-terminal domain CJF59_08605 PF00580 UvrD/REP helicase N-terminal domain CJF59_08615 PF00557 Metallopeptidase family M24 CJF59_08615 PF01321 Creatinase/Prolidase N-terminal domain CJF59_08620 PF18324 Hypothetical protein TT1725 CJF59_08620 PF00180 Isocitrate/isopropylmalate dehydrogenase CJF59_08630 PF16658 Class II release factor RF3, C-terminal domain CJF59_08630 PF00009 Elongation factor Tu GTP binding domain CJF59_08630 PF03144 Elongation factor Tu domain 2 CJF59_08635 PF01479 S4 domain CJF59_08635 PF00163 Ribosomal protein S4/S9 N-terminal domain CJF59_08645 PF00999 Sodium/hydrogen exchanger family CJF59_08660 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CJF59_08665 PF12849 PBP superfamily domain CJF59_08670 PF01588 Putative tRNA binding domain CJF59_08670 PF03483 B3/4 domain CJF59_08670 PF03147 Ferredoxin-fold anticodon binding domain CJF59_08670 PF03484 tRNA synthetase B5 domain CJF59_08670 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CJF59_08675 PF01409 tRNA synthetases class II core domain (F) CJF59_08675 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CJF59_08680 PF00453 Ribosomal protein L20 CJF59_08685 PF01632 Ribosomal protein L35 CJF59_08690 PF08125 Mannitol dehydrogenase C-terminal domain CJF59_08690 PF01232 Mannitol dehydrogenase Rossmann domain CJF59_08695 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CJF59_08695 PF00034 Cytochrome c CJF59_08695 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CJF59_08700 PF01799 [2Fe-2S] binding domain CJF59_08700 PF00111 2Fe-2S iron-sulfur cluster binding domain CJF59_08705 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CJF59_08710 PF02657 Fe-S metabolism associated domain CJF59_08715 PF07724 AAA domain (Cdc48 subfamily) CJF59_08715 PF00004 ATPase family associated with various cellular activities (AAA) CJF59_08715 PF10431 C-terminal, D2-small domain, of ClpB protein CJF59_08720 PF00227 Proteasome subunit CJF59_08725 PF00072 Response regulator receiver domain CJF59_08725 PF13188 PAS domain CJF59_08725 PF08448 PAS fold CJF59_08725 PF00512 His Kinase A (phospho-acceptor) domain CJF59_08725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJF59_08730 PF13188 PAS domain CJF59_08730 PF00072 Response regulator receiver domain CJF59_08730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJF59_08730 PF00512 His Kinase A (phospho-acceptor) domain CJF59_08730 PF08448 PAS fold CJF59_08745 PF00005 ABC transporter CJF59_08760 PF00756 Putative esterase CJF59_08765 PF01062 Bestrophin, RFP-TM, chloride channel CJF59_08770 PF02559 CarD-like/TRCF domain CJF59_08785 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CJF59_08795 PF13417 Glutathione S-transferase, N-terminal domain CJF59_08795 PF00043 Glutathione S-transferase, C-terminal domain CJF59_08800 PF03775 Septum formation inhibitor MinC, C-terminal domain CJF59_08800 PF05209 Septum formation inhibitor MinC, N-terminal domain CJF59_08805 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CJF59_08810 PF03776 Septum formation topological specificity factor MinE CJF59_08815 PF00392 Bacterial regulatory proteins, gntR family CJF59_08815 PF07729 FCD domain CJF59_08820 PF00664 ABC transporter transmembrane region CJF59_08820 PF00005 ABC transporter CJF59_08840 PF04453 LPS transport system D CJF59_08845 PF00639 PPIC-type PPIASE domain CJF59_08845 PF09312 SurA N-terminal domain CJF59_08850 PF00398 Ribosomal RNA adenine dimethylase CJF59_08860 PF03948 Ribosomal protein L9, C-terminal domain CJF59_08860 PF01281 Ribosomal protein L9, N-terminal domain CJF59_08865 PF01084 Ribosomal protein S18 CJF59_08870 PF01250 Ribosomal protein S6 CJF59_08880 PF04542 Sigma-70 region 2 CJF59_08880 PF04546 Sigma-70, non-essential region CJF59_08880 PF03979 Sigma-70 factor, region 1.1 CJF59_08880 PF04545 Sigma-70, region 4 CJF59_08880 PF00140 Sigma-70 factor, region 1.2 CJF59_08880 PF04539 Sigma-70 region 3 CJF59_08885 PF01807 CHC2 zinc finger CJF59_08885 PF13662 Toprim domain CJF59_08885 PF08275 DNA primase catalytic core, N-terminal domain CJF59_08885 PF10410 DnaB-helicase binding domain of primase CJF59_08885 PF08278 DNA primase DnaG DnaB-binding CJF59_08895 PF00117 Glutamine amidotransferase class-I CJF59_08895 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CJF59_08900 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CJF59_08900 PF02142 MGS-like domain CJF59_08900 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CJF59_08905 PF03449 Transcription elongation factor, N-terminal CJF59_08905 PF01272 Transcription elongation factor, GreA/GreB, C-term CJF59_08910 PF00291 Pyridoxal-phosphate dependent enzyme CJF59_08910 PF13291 ACT domain CJF59_08915 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CJF59_08915 PF01676 Metalloenzyme superfamily CJF59_08930 PF03572 Peptidase family S41 CJF59_08930 PF13180 PDZ domain CJF59_08940 PF00293 NUDIX domain CJF59_08945 PF07690 Major Facilitator Superfamily CJF59_08950 PF13533 Biotin-lipoyl like CJF59_08955 PF00005 ABC transporter CJF59_08955 PF00664 ABC transporter transmembrane region CJF59_08960 PF13735 tRNA nucleotidyltransferase domain 2 putative CJF59_08960 PF01743 Poly A polymerase head domain CJF59_08960 PF12627 Probable RNA and SrmB- binding site of polymerase A CJF59_08970 PF07726 ATPase family associated with various cellular activities (AAA) CJF59_08970 PF17863 AAA lid domain CJF59_08995 PF18755 Restriction Enzyme Adenine Methylase Associated CJF59_08995 PF01555 DNA methylase CJF59_09000 PF01351 Ribonuclease HII CJF59_09005 PF05532 CsbD-like CJF59_09010 PF07690 Major Facilitator Superfamily CJF59_09015 PF13533 Biotin-lipoyl like CJF59_09020 PF00873 AcrB/AcrD/AcrF family CJF59_09025 PF00873 AcrB/AcrD/AcrF family CJF59_09030 PF02321 Outer membrane efflux protein CJF59_09035 PF07043 Protein of unknown function (DUF1328) CJF59_09045 PF00005 ABC transporter CJF59_09050 PF00528 Binding-protein-dependent transport system inner membrane component CJF59_09060 PF01196 Ribosomal protein L17 CJF59_09065 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CJF59_09065 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CJF59_09065 PF01000 RNA polymerase Rpb3/RpoA insert domain CJF59_09070 PF00411 Ribosomal protein S11 CJF59_09075 PF00416 Ribosomal protein S13/S18 CJF59_09080 PF05191 Adenylate kinase, active site lid CJF59_09085 PF00344 SecY translocase CJF59_09090 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CJF59_09095 PF00327 Ribosomal protein L30p/L7e CJF59_09100 PF03719 Ribosomal protein S5, C-terminal domain CJF59_09100 PF00333 Ribosomal protein S5, N-terminal domain CJF59_09105 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CJF59_09110 PF00347 Ribosomal protein L6 CJF59_09115 PF00410 Ribosomal protein S8 CJF59_09120 PF00253 Ribosomal protein S14p/S29e CJF59_09125 PF00281 Ribosomal protein L5 CJF59_09125 PF00673 ribosomal L5P family C-terminus CJF59_09130 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CJF59_09135 PF00238 Ribosomal protein L14p/L23e CJF59_09140 PF00366 Ribosomal protein S17 CJF59_09145 PF00831 Ribosomal L29 protein CJF59_09150 PF00252 Ribosomal protein L16p/L10e CJF59_09155 PF00189 Ribosomal protein S3, C-terminal domain CJF59_09155 PF07650 KH domain CJF59_09160 PF00237 Ribosomal protein L22p/L17e CJF59_09165 PF00203 Ribosomal protein S19 CJF59_09170 PF00181 Ribosomal Proteins L2, RNA binding domain CJF59_09170 PF03947 Ribosomal Proteins L2, C-terminal domain CJF59_09175 PF00276 Ribosomal protein L23 CJF59_09180 PF00573 Ribosomal protein L4/L1 family CJF59_09185 PF00297 Ribosomal protein L3 CJF59_09190 PF00338 Ribosomal protein S10p/S20e CJF59_09195 PF03143 Elongation factor Tu C-terminal domain CJF59_09195 PF03144 Elongation factor Tu domain 2 CJF59_09195 PF00009 Elongation factor Tu GTP binding domain CJF59_09200 PF00177 Ribosomal protein S7p/S5e CJF59_09205 PF00164 Ribosomal protein S12/S23 CJF59_09210 PF04998 RNA polymerase Rpb1, domain 5 CJF59_09210 PF00623 RNA polymerase Rpb1, domain 2 CJF59_09210 PF05000 RNA polymerase Rpb1, domain 4 CJF59_09210 PF04997 RNA polymerase Rpb1, domain 1 CJF59_09210 PF04983 RNA polymerase Rpb1, domain 3 CJF59_09215 PF00562 RNA polymerase Rpb2, domain 6 CJF59_09215 PF10385 RNA polymerase beta subunit external 1 domain CJF59_09215 PF04565 RNA polymerase Rpb2, domain 3 CJF59_09215 PF04561 RNA polymerase Rpb2, domain 2 CJF59_09215 PF04563 RNA polymerase beta subunit CJF59_09215 PF04560 RNA polymerase Rpb2, domain 7 CJF59_09225 PF16320 Ribosomal protein L7/L12 dimerisation domain CJF59_09225 PF00542 Ribosomal protein L7/L12 C-terminal domain CJF59_09230 PF00466 Ribosomal protein L10 CJF59_09235 PF00687 Ribosomal protein L1p/L10e family CJF59_09240 PF03946 Ribosomal protein L11, N-terminal domain CJF59_09240 PF00298 Ribosomal protein L11, RNA binding domain CJF59_09245 PF02321 Outer membrane efflux protein CJF59_09250 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CJF59_09255 PF00873 AcrB/AcrD/AcrF family CJF59_09260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJF59_09260 PF00512 His Kinase A (phospho-acceptor) domain CJF59_09265 PF00486 Transcriptional regulatory protein, C terminal CJF59_09265 PF00072 Response regulator receiver domain CJF59_09270 PF02646 RmuC family CJF59_09275 PF00083 Sugar (and other) transporter CJF59_09285 PF00578 AhpC/TSA family CJF59_09290 PF03710 Glutamate-ammonia ligase adenylyltransferase CJF59_09290 PF08335 GlnD PII-uridylyltransferase CJF59_09315 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CJF59_09320 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CJF59_09320 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CJF59_09350 PF01578 Cytochrome C assembly protein CJF59_09355 PF03100 CcmE CJF59_09360 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal CJF59_09360 PF01578 Cytochrome C assembly protein CJF59_09365 PF08534 Redoxin CJF59_09370 PF03918 Cytochrome C biogenesis protein CJF59_09390 PF04632 Fusaric acid resistance protein family CJF59_09395 PF04632 Fusaric acid resistance protein family CJF59_09400 PF07885 Ion channel CJF59_09400 PF17655 Inward rectifier potassium channel C-terminal domain CJF59_09420 PF00005 ABC transporter CJF59_09430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJF59_09430 PF00672 HAMP domain CJF59_09430 PF02743 Cache domain CJF59_09435 PF02541 Ppx/GppA phosphatase family CJF59_09440 PF13090 Polyphosphate kinase C-terminal domain 2 CJF59_09440 PF17941 Polyphosphate kinase C-terminal domain 1 CJF59_09440 PF13089 Polyphosphate kinase N-terminal domain CJF59_09440 PF02503 Polyphosphate kinase middle domain CJF59_09450 PF00586 AIR synthase related protein, N-terminal domain CJF59_09450 PF02769 AIR synthase related protein, C-terminal domain CJF59_09455 PF00551 Formyl transferase CJF59_09460 PF01029 NusB family CJF59_09460 PF01189 16S rRNA methyltransferase RsmB/F CJF59_09465 PF00834 Ribulose-phosphate 3 epimerase family CJF59_09475 PF13579 Glycosyl transferase 4-like domain CJF59_09475 PF00534 Glycosyl transferases group 1 CJF59_09485 PF00929 Exonuclease CJF59_09490 PF01121 Dephospho-CoA kinase CJF59_09495 PF08501 Shikimate dehydrogenase substrate binding domain CJF59_09495 PF01488 Shikimate / quinate 5-dehydrogenase CJF59_09495 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CJF59_09515 PF00206 Lyase CJF59_09515 PF14698 Argininosuccinate lyase C-terminal CJF59_09520 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CJF59_09520 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CJF59_09530 PF16363 GDP-mannose 4,6 dehydratase CJF59_09535 PF00089 Trypsin CJF59_09540 PF08240 Alcohol dehydrogenase GroES-like domain CJF59_09545 PF01022 Bacterial regulatory protein, arsR family CJF59_09550 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CJF59_09555 PF02548 Ketopantoate hydroxymethyltransferase CJF59_09745 PF12833 Helix-turn-helix domain CJF59_09745 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term CJF59_09775 PF02423 Ornithine cyclodeaminase/mu-crystallin family CJF59_09780 PF00881 Nitroreductase family CJF59_09800 PF01048 Phosphorylase superfamily CJF59_09805 PF00032 Cytochrome b(C-terminal)/b6/petD CJF59_09805 PF02167 Cytochrome C1 family CJF59_09805 PF00033 Cytochrome b/b6/petB CJF59_09810 PF00032 Cytochrome b(C-terminal)/b6/petD CJF59_09810 PF02167 Cytochrome C1 family CJF59_09810 PF00033 Cytochrome b/b6/petB CJF59_09815 PF01218 Coproporphyrinogen III oxidase CJF59_09825 PF00488 MutS domain V CJF59_09825 PF01713 Smr domain CJF59_09830 PF03150 Di-haem cytochrome c peroxidase CJF59_09830 PF00034 Cytochrome c CJF59_09835 PF01555 DNA methylase CJF59_09845 PF00934 PE family CJF59_09845 PF00300 Histidine phosphatase superfamily (branch 1) CJF59_09850 PF02556 Preprotein translocase subunit SecB CJF59_09860 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CJF59_09860 PF03900 Porphobilinogen deaminase, C-terminal domain CJF59_09865 PF00814 Glycoprotease family CJF59_09870 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ CJF59_09885 PF01921 tRNA synthetases class I (K) CJF59_09890 PF00994 Probable molybdopterin binding domain CJF59_09890 PF18146 Damage-inducible protein CinA KH domain CJF59_09890 PF02464 Competence-damaged protein CJF59_09895 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CJF59_09900 PF02899 Phage integrase, N-terminal SAM-like domain CJF59_09900 PF00589 Phage integrase family CJF59_09910 PF01761 3-dehydroquinate synthase CJF59_09915 PF00691 OmpA family CJF59_09925 PF02272 DHHA1 domain CJF59_09925 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CJF59_09925 PF01411 tRNA synthetases class II (A) CJF59_09930 PF02666 Phosphatidylserine decarboxylase CJF59_09935 PF01066 CDP-alcohol phosphatidyltransferase CJF59_09940 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CJF59_09945 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CJF59_09975 PF16123 Hydroxyacylglutathione hydrolase C-terminus CJF59_09975 PF00753 Metallo-beta-lactamase superfamily CJF59_09990 PF05221 S-adenosyl-L-homocysteine hydrolase CJF59_09990 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CJF59_10005 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CJF59_10005 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJF59_10010 PF02817 e3 binding domain CJF59_10010 PF00364 Biotin-requiring enzyme CJF59_10010 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CJF59_10015 PF02779 Transketolase, pyrimidine binding domain CJF59_10015 PF16870 2-oxoglutarate dehydrogenase C-terminal CJF59_10015 PF16078 2-oxoglutarate dehydrogenase N-terminus CJF59_10015 PF00676 Dehydrogenase E1 component CJF59_10020 PF03969 AFG1-like ATPase CJF59_10025 PF02627 Carboxymuconolactone decarboxylase family CJF59_10030 PF13567 Domain of unknown function (DUF4131) CJF59_10030 PF00753 Metallo-beta-lactamase superfamily CJF59_10030 PF03772 Competence protein CJF59_10035 PF00749 tRNA synthetases class I (E and Q), catalytic domain CJF59_10040 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CJF59_10040 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CJF59_10045 PF01979 Amidohydrolase family CJF59_10050 PF02660 Glycerol-3-phosphate acyltransferase CJF59_10055 PF17782 DprA winged helix domain CJF59_10055 PF02481 DNA recombination-mediator protein A CJF59_10060 PF13368 Topoisomerase C-terminal repeat CJF59_10060 PF01131 DNA topoisomerase CJF59_10060 PF01751 Toprim domain CJF59_10060 PF01396 Topoisomerase DNA binding C4 zinc finger CJF59_10065 PF00773 RNB domain CJF59_10065 PF08461 Ribonuclease R winged-helix domain CJF59_10065 PF08206 Ribonuclease B OB domain CJF59_10065 PF00575 S1 RNA binding domain CJF59_10065 PF17876 Cold shock domain CJF59_10070 PF13180 PDZ domain CJF59_10070 PF03572 Peptidase family S41 CJF59_10080 PF00691 OmpA family CJF59_10085 PF00291 Pyridoxal-phosphate dependent enzyme CJF59_10090 PF02082 Transcriptional regulator CJF59_10105 PF01751 Toprim domain CJF59_10105 PF00204 DNA gyrase B CJF59_10105 PF00986 DNA gyrase B subunit, carboxyl terminus CJF59_10105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJF59_10110 PF00892 EamA-like transporter family CJF59_10115 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus CJF59_10115 PF00361 Proton-conducting membrane transporter CJF59_10120 PF01119 DNA mismatch repair protein, C-terminal domain CJF59_10120 PF08676 MutL C terminal dimerisation domain CJF59_10130 PF01252 Signal peptidase (SPase) II CJF59_10135 PF06827 Zinc finger found in FPG and IleRS CJF59_10135 PF00133 tRNA synthetases class I (I, L, M and V) CJF59_10135 PF08264 Anticodon-binding domain of tRNA CJF59_10140 PF01687 Riboflavin kinase CJF59_10140 PF06574 FAD synthetase CJF59_10150 PF03079 ARD/ARD' family CJF59_10155 PF00596 Class II Aldolase and Adducin N-terminal domain CJF59_10160 PF02416 mttA/Hcf106 family CJF59_10175 PF00202 Aminotransferase class-III CJF59_10180 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CJF59_10180 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CJF59_10190 PF01430 Hsp33 protein CJF59_10200 PF08482 ATP-dependent helicase C-terminal CJF59_10200 PF00271 Helicase conserved C-terminal domain CJF59_10200 PF04408 Helicase associated domain (HA2) CJF59_10200 PF00270 DEAD/DEAH box helicase CJF59_10205 PF13180 PDZ domain CJF59_10210 PF00248 Aldo/keto reductase family CJF59_10220 PF00883 Cytosol aminopeptidase family, catalytic domain CJF59_10220 PF02789 Cytosol aminopeptidase family, N-terminal domain CJF59_10225 PF00459 Inositol monophosphatase family CJF59_10230 PF03481 Putative GTP-binding controlling metal-binding CJF59_10230 PF01300 Telomere recombination CJF59_10240 PF02913 FAD linked oxidases, C-terminal domain CJF59_10240 PF01565 FAD binding domain CJF59_10255 PF01923 Cobalamin adenosyltransferase CJF59_10285 PF16177 Acetyl-coenzyme A synthetase N-terminus CJF59_10285 PF13193 AMP-binding enzyme C-terminal domain CJF59_10285 PF00501 AMP-binding enzyme CJF59_10300 PF00171 Aldehyde dehydrogenase family CJF59_10300 PF01619 Proline dehydrogenase CJF59_10300 PF14850 DNA-binding domain of Proline dehydrogenase CJF59_10300 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CJF59_10310 PF00324 Amino acid permease CJF59_10330 PF06745 KaiC CJF59_10330 PF18073 Rubredoxin metal binding domain CJF59_10340 PF02405 Permease MlaE CJF59_10345 PF00005 ABC transporter CJF59_10350 PF12795 Mechanosensitive ion channel porin domain CJF59_10350 PF12794 Mechanosensitive ion channel inner membrane domain 1 CJF59_10350 PF00924 Mechanosensitive ion channel CJF59_10355 PF03796 DnaB-like helicase C terminal domain CJF59_10355 PF00772 DnaB-like helicase N terminal domain CJF59_10365 PF00294 pfkB family carbohydrate kinase CJF59_10365 PF01467 Cytidylyltransferase-like CJF59_10370 PF00625 Guanylate kinase CJF59_10375 PF00561 alpha/beta hydrolase fold CJF59_10375 PF00106 short chain dehydrogenase CJF59_10385 PF08032 RNA 2'-O ribose methyltransferase substrate binding CJF59_10385 PF00588 SpoU rRNA Methylase family CJF59_10390 PF01612 3'-5' exonuclease CJF59_10390 PF00570 HRDC domain CJF59_10395 PF01380 SIS domain CJF59_10395 PF00571 CBS domain CJF59_10410 PF00005 ABC transporter CJF59_10415 PF03473 MOSC domain CJF59_10415 PF00111 2Fe-2S iron-sulfur cluster binding domain CJF59_10415 PF03476 MOSC N-terminal beta barrel domain CJF59_10425 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus CJF59_10425 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CJF59_10435 PF00011 Hsp20/alpha crystallin family CJF59_10445 PF01327 Polypeptide deformylase CJF59_10450 PF00551 Formyl transferase CJF59_10450 PF02911 Formyl transferase, C-terminal domain CJF59_10455 PF01416 tRNA pseudouridine synthase CJF59_10465 PF07687 Peptidase dimerisation domain CJF59_10465 PF01546 Peptidase family M20/M25/M40 CJF59_10470 PF00132 Bacterial transferase hexapeptide (six repeats) CJF59_10470 PF14602 Hexapeptide repeat of succinyl-transferase CJF59_10470 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CJF59_10475 PF00696 Amino acid kinase family CJF59_10480 PF01926 50S ribosome-binding GTPase CJF59_10485 PF02096 60Kd inner membrane protein CJF59_10485 PF14849 YidC periplasmic domain CJF59_10490 PF00825 Ribonuclease P CJF59_10495 PF00468 Ribosomal protein L34 CJF59_10505 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CJF59_10510 PF17930 LpxI N-terminal domain CJF59_10510 PF06230 LpxI C-terminal domain CJF59_10515 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CJF59_10515 PF00132 Bacterial transferase hexapeptide (six repeats) CJF59_10520 PF07977 FabA-like domain CJF59_10525 PF00132 Bacterial transferase hexapeptide (six repeats) CJF59_10525 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CJF59_10535 PF07244 Surface antigen variable number repeat CJF59_10535 PF01103 Surface antigen CJF59_10540 PF17820 PDZ domain CJF59_10540 PF02163 Peptidase family M50 CJF59_10545 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CJF59_10545 PF13288 DXP reductoisomerase C-terminal domain CJF59_10545 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CJF59_10555 PF01255 Putative undecaprenyl diphosphate synthase CJF59_10560 PF01765 Ribosome recycling factor CJF59_10565 PF00696 Amino acid kinase family CJF59_10570 PF01926 50S ribosome-binding GTPase CJF59_10570 PF07650 KH domain CJF59_10575 PF00035 Double-stranded RNA binding motif CJF59_10575 PF14622 Ribonuclease-III-like CJF59_10580 PF10502 Signal peptidase, peptidase S26 CJF59_10585 PF01648 4'-phosphopantetheinyl transferase superfamily CJF59_10590 PF04607 Region found in RelA / SpoT proteins CJF59_10590 PF02824 TGS domain CJF59_10590 PF13291 ACT domain CJF59_10595 PF01192 RNA polymerase Rpb6 CJF59_10600 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CJF59_10610 PF00484 Carbonic anhydrase CJF59_10620 PF00270 DEAD/DEAH box helicase CJF59_10620 PF00271 Helicase conserved C-terminal domain CJF59_10625 PF07021 Methionine biosynthesis protein MetW CJF59_10625 PF00561 alpha/beta hydrolase fold CJF59_10630 PF00561 alpha/beta hydrolase fold CJF59_10635 PF03144 Elongation factor Tu domain 2 CJF59_10635 PF06421 GTP-binding protein LepA C-terminus CJF59_10635 PF00009 Elongation factor Tu GTP binding domain CJF59_10635 PF00679 Elongation factor G C-terminus CJF59_10650 PF01011 PQQ enzyme repeat CJF59_10660 PF03951 Glutamine synthetase, beta-Grasp domain CJF59_10660 PF00120 Glutamine synthetase, catalytic domain CJF59_10665 PF00543 Nitrogen regulatory protein P-II CJF59_10670 PF00155 Aminotransferase class I and II CJF59_10690 PF00180 Isocitrate/isopropylmalate dehydrogenase CJF59_10695 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJF59_10700 PF01266 FAD dependent oxidoreductase CJF59_10730 PF00224 Pyruvate kinase, barrel domain CJF59_10730 PF02887 Pyruvate kinase, alpha/beta domain CJF59_10740 PF00899 ThiF family CJF59_10775 PF03169 OPT oligopeptide transporter protein CJF59_10790 PF00561 alpha/beta hydrolase fold CJF59_10800 PF01545 Cation efflux family CJF59_10805 PF16916 Dimerisation domain of Zinc Transporter CJF59_10805 PF01545 Cation efflux family CJF59_10815 PF02492 CobW/HypB/UreG, nucleotide-binding domain CJF59_10815 PF07683 Cobalamin synthesis protein cobW C-terminal domain CJF59_10825 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJF59_10835 PF00011 Hsp20/alpha crystallin family CJF59_10840 PF00561 alpha/beta hydrolase fold CJF59_10840 PF00364 Biotin-requiring enzyme CJF59_10845 PF02779 Transketolase, pyrimidine binding domain CJF59_10845 PF02780 Transketolase, C-terminal domain CJF59_10850 PF00676 Dehydrogenase E1 component CJF59_10860 PF01384 Phosphate transporter family CJF59_10865 PF03976 Polyphosphate kinase 2 (PPK2) CJF59_10885 PF01431 Peptidase family M13 CJF59_10885 PF05649 Peptidase family M13 CJF59_10900 PF03061 Thioesterase superfamily CJF59_10925 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CJF59_10930 PF00106 short chain dehydrogenase CJF59_10935 PF02082 Transcriptional regulator CJF59_10940 PF04343 Protein of unknown function, DUF488 CJF59_10945 PF00551 Formyl transferase CJF59_10975 PF00999 Sodium/hydrogen exchanger family CJF59_11115 PF01757 Acyltransferase family CJF59_11205 PF07715 TonB-dependent Receptor Plug Domain CJF59_11205 PF00593 TonB dependent receptor CJF59_11275 PF02325 YGGT family CJF59_11420 PF03354 Phage Terminase CJF59_11535 PF03641 Possible lysine decarboxylase CJF59_11540 PF07690 Major Facilitator Superfamily CJF59_11555 PF13419 Haloacid dehalogenase-like hydrolase CJF59_11560 PF01208 Uroporphyrinogen decarboxylase (URO-D) CJF59_11565 PF02545 Maf-like protein CJF59_11575 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CJF59_11575 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CJF59_11575 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CJF59_11575 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CJF59_11580 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CJF59_11590 PF07690 Major Facilitator Superfamily CJF59_11600 PF03966 Trm112p-like protein CJF59_11605 PF02190 ATP-dependent protease La (LON) substrate-binding domain CJF59_11605 PF05362 Lon protease (S16) C-terminal proteolytic domain CJF59_11605 PF00004 ATPase family associated with various cellular activities (AAA) CJF59_11610 PF00085 Thioredoxin CJF59_11615 PF17760 UvrA interaction domain CJF59_11615 PF00005 ABC transporter CJF59_11615 PF17755 UvrA DNA-binding domain CJF59_11640 PF00881 Nitroreductase family CJF59_11650 PF00583 Acetyltransferase (GNAT) family CJF59_11655 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CJF59_11655 PF02843 Phosphoribosylglycinamide synthetase, C domain CJF59_11655 PF02844 Phosphoribosylglycinamide synthetase, N domain CJF59_11660 PF02601 Exonuclease VII, large subunit CJF59_11660 PF13742 OB-fold nucleic acid binding domain CJF59_11675 PF00266 Aminotransferase class-V CJF59_11680 PF00171 Aldehyde dehydrogenase family CJF59_11685 PF00107 Zinc-binding dehydrogenase CJF59_11685 PF08240 Alcohol dehydrogenase GroES-like domain CJF59_11690 PF02233 NAD(P) transhydrogenase beta subunit CJF59_11695 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CJF59_11700 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CJF59_11700 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CJF59_11705 PF02774 Semialdehyde dehydrogenase, dimerisation domain CJF59_11705 PF01118 Semialdehyde dehydrogenase, NAD binding domain CJF59_11710 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CJF59_11715 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CJF59_11720 PF00890 FAD binding domain CJF59_11720 PF02910 Fumarate reductase flavoprotein C-term CJF59_11725 PF13085 2Fe-2S iron-sulfur cluster binding domain CJF59_11735 PF00892 EamA-like transporter family CJF59_11740 PF00162 Phosphoglycerate kinase CJF59_11745 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CJF59_11745 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CJF59_11750 PF02780 Transketolase, C-terminal domain CJF59_11750 PF02779 Transketolase, pyrimidine binding domain CJF59_11750 PF00456 Transketolase, thiamine diphosphate binding domain CJF59_11760 PF00155 Aminotransferase class I and II CJF59_11775 PF00154 recA bacterial DNA recombination protein CJF59_11785 PF03459 TOBE domain CJF59_11785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJF59_11790 PF04349 Periplasmic glucan biosynthesis protein, MdoG CJF59_11795 PF13632 Glycosyl transferase family group 2 CJF59_11800 PF01979 Amidohydrolase family CJF59_11805 PF07690 Major Facilitator Superfamily CJF59_11820 PF12170 DNA polymerase III tau subunit V interacting with alpha CJF59_11820 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding CJF59_11820 PF12169 DNA polymerase III subunits gamma and tau domain III CJF59_11825 PF02575 YbaB/EbfC DNA-binding family CJF59_11830 PF02132 RecR protein CJF59_11830 PF13662 Toprim domain CJF59_11840 PF02152 Dihydroneopterin aldolase CJF59_11850 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CJF59_11855 PF02224 Cytidylate kinase CJF59_11860 PF00575 S1 RNA binding domain CJF59_11875 PF01725 Ham1 family CJF59_11880 PF01138 3' exoribonuclease family, domain 1 CJF59_11880 PF03725 3' exoribonuclease family, domain 2 CJF59_11885 PF01628 HrcA protein C terminal domain CJF59_11890 PF17092 Penicillin-binding protein OB-like domain CJF59_11890 PF00905 Penicillin binding protein transpeptidase domain CJF59_11890 PF00912 Transglycosylase CJF59_11895 PF00472 RF-1 domain CJF59_11895 PF03462 PCRF domain CJF59_11905 PF01618 MotA/TolQ/ExbB proton channel family CJF59_11910 PF02472 Biopolymer transport protein ExbD/TolR CJF59_11915 PF02472 Biopolymer transport protein ExbD/TolR CJF59_11925 PF01098 Cell cycle protein CJF59_11930 PF00905 Penicillin binding protein transpeptidase domain CJF59_11930 PF03717 Penicillin-binding Protein dimerisation domain CJF59_11950 PF00682 HMGL-like CJF59_11950 PF08502 LeuA allosteric (dimerisation) domain CJF59_11955 PF02628 Cytochrome oxidase assembly protein CJF59_11965 PF07690 Major Facilitator Superfamily CJF59_11970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJF59_11970 PF00512 His Kinase A (phospho-acceptor) domain CJF59_11970 PF08448 PAS fold CJF59_11970 PF13188 PAS domain CJF59_11970 PF00072 Response regulator receiver domain CJF59_11975 PF00156 Phosphoribosyl transferase domain CJF59_11980 PF04632 Fusaric acid resistance protein family CJF59_11985 PF05161 MOFRL family CJF59_11985 PF13660 Domain of unknown function (DUF4147) CJF59_11990 PF03167 Uracil DNA glycosylase superfamily CJF59_11995 PF00034 Cytochrome c CJF59_11995 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CJF59_12000 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CJF59_12000 PF13360 PQQ-like domain CJF59_12010 PF01027 Inhibitor of apoptosis-promoting Bax1 CJF59_12020 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CJF59_12020 PF06481 COX Aromatic Rich Motif CJF59_12025 PF00115 Cytochrome C and Quinol oxidase polypeptide I CJF59_12030 PF00510 Cytochrome c oxidase subunit III CJF59_12035 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CJF59_12040 PF11953 Domain of unknown function (DUF3470) CJF59_12040 PF00037 4Fe-4S binding domain CJF59_12050 PF00883 Cytosol aminopeptidase family, catalytic domain CJF59_12050 PF02789 Cytosol aminopeptidase family, N-terminal domain CJF59_12065 PF00953 Glycosyl transferase family 4 CJF59_12070 PF02719 Polysaccharide biosynthesis protein CJF59_12075 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CJF59_12085 PF01979 Amidohydrolase family CJF59_12090 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJF59_12090 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CJF59_12095 PF00970 Oxidoreductase FAD-binding domain CJF59_12095 PF00175 Oxidoreductase NAD-binding domain CJF59_12115 PF09335 SNARE associated Golgi protein CJF59_12120 PF00326 Prolyl oligopeptidase family CJF59_12125 PF00390 Malic enzyme, N-terminal domain CJF59_12125 PF03949 Malic enzyme, NAD binding domain CJF59_12130 PF02357 Transcription termination factor nusG CJF59_12130 PF00467 KOW motif CJF59_12155 PF00213 ATP synthase delta (OSCP) subunit CJF59_12160 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CJF59_12160 PF02874 ATP synthase alpha/beta family, beta-barrel domain CJF59_12160 PF00306 ATP synthase alpha/beta chain, C terminal domain CJF59_12165 PF00231 ATP synthase CJF59_12170 PF02874 ATP synthase alpha/beta family, beta-barrel domain CJF59_12170 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CJF59_12175 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CJF59_12180 PF14489 QueF-like protein CJF59_12185 PF01612 3'-5' exonuclease CJF59_12185 PF00570 HRDC domain CJF59_12190 PF00294 pfkB family carbohydrate kinase CJF59_12205 PF00324 Amino acid permease CJF59_12210 PF00005 ABC transporter CJF59_12210 PF17850 CysA C-terminal regulatory domain CJF59_12210 PF12857 TOBE-like domain CJF59_12215 PF00528 Binding-protein-dependent transport system inner membrane component CJF59_12220 PF00528 Binding-protein-dependent transport system inner membrane component CJF59_12240 PF12833 Helix-turn-helix domain CJF59_12240 PF02311 AraC-like ligand binding domain CJF59_12245 PF06751 Ethanolamine ammonia lyase large subunit (EutB) CJF59_12250 PF05985 Ethanolamine ammonia-lyase light chain (EutC) CJF59_12255 PF00324 Amino acid permease CJF59_12265 PF00529 HlyD membrane-fusion protein of T1SS CJF59_12265 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CJF59_12270 PF00873 AcrB/AcrD/AcrF family CJF59_12275 PF02321 Outer membrane efflux protein CJF59_12280 PF00313 'Cold-shock' DNA-binding domain CJF59_12290 PF00593 TonB dependent receptor CJF59_12290 PF07715 TonB-dependent Receptor Plug Domain CJF59_12290 PF07660 Secretin and TonB N terminus short domain CJF59_12300 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CJF59_12320 PF00795 Carbon-nitrogen hydrolase CJF59_12325 PF00072 Response regulator receiver domain CJF59_12330 PF00512 His Kinase A (phospho-acceptor) domain CJF59_12330 PF09308 LuxQ, periplasmic CJF59_12330 PF00072 Response regulator receiver domain CJF59_12330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJF59_12350 PF00005 ABC transporter CJF59_12350 PF12399 Branched-chain amino acid ATP-binding cassette transporter CJF59_12355 PF08402 TOBE domain CJF59_12355 PF00005 ABC transporter CJF59_12380 PF00239 Resolvase, N terminal domain CJF59_12380 PF02796 Helix-turn-helix domain of resolvase CJF59_12450 PF00239 Resolvase, N terminal domain CJF59_12450 PF02796 Helix-turn-helix domain of resolvase CJF59_12490 PF02661 Fic/DOC family CJF59_12490 PF12728 Helix-turn-helix domain CJF59_12495 PF00239 Resolvase, N terminal domain CJF59_12495 PF02796 Helix-turn-helix domain of resolvase CJF59_12535 PF03692 Putative zinc- or iron-chelating domain CJF59_12550 PF00005 ABC transporter CJF59_12550 PF08402 TOBE domain CJF59_12575 PF00529 HlyD membrane-fusion protein of T1SS CJF59_12575 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CJF59_12580 PF02321 Outer membrane efflux protein CJF59_12595 PF13243 Squalene-hopene cyclase C-terminal domain CJF59_12595 PF13249 Squalene-hopene cyclase N-terminal domain CJF59_12600 PF01593 Flavin containing amine oxidoreductase CJF59_12620 PF01370 NAD dependent epimerase/dehydratase family CJF59_12630 PF02153 Prephenate dehydrogenase CJF59_12640 PF00444 Ribosomal protein L36 CJF59_12645 PF03466 LysR substrate binding domain CJF59_12645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJF59_12650 PF00578 AhpC/TSA family CJF59_12655 PF02627 Carboxymuconolactone decarboxylase family CJF59_12665 PF04264 YceI-like domain CJF59_12675 PF00719 Inorganic pyrophosphatase CJF59_12685 PF00005 ABC transporter CJF59_12685 PF12848 ABC transporter CJF59_12690 PF13302 Acetyltransferase (GNAT) domain CJF59_12705 PF00226 DnaJ domain CJF59_12705 PF05099 Tellurite resistance protein TerB CJF59_12715 PF08331 Domain of unknown function (DUF1730) CJF59_12720 PF01702 Queuine tRNA-ribosyltransferase CJF59_12725 PF02547 Queuosine biosynthesis protein CJF59_12735 PF01161 Phosphatidylethanolamine-binding protein CJF59_12750 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CJF59_12750 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CJF59_12765 PF02867 Ribonucleotide reductase, barrel domain CJF59_12765 PF08471 Class II vitamin B12-dependent ribonucleotide reductase CJF59_12790 PF02358 Trehalose-phosphatase CJF59_12795 PF00982 Glycosyltransferase family 20 CJF59_12800 PF02600 Disulfide bond formation protein DsbB CJF59_12815 PF00248 Aldo/keto reductase family CJF59_12825 PF12344 Ultra-violet resistance protein B CJF59_12825 PF17757 UvrB interaction domain CJF59_12825 PF00271 Helicase conserved C-terminal domain CJF59_12825 PF04851 Type III restriction enzyme, res subunit CJF59_12825 PF02151 UvrB/uvrC motif CJF59_12835 PF00675 Insulinase (Peptidase family M16) CJF59_12835 PF05193 Peptidase M16 inactive domain CJF59_12855 PF00535 Glycosyl transferase family 2 CJF59_12865 PF00324 Amino acid permease CJF59_12870 PF11799 impB/mucB/samB family C-terminal domain CJF59_12870 PF00817 impB/mucB/samB family CJF59_12880 PF01180 Dihydroorotate dehydrogenase CJF59_12890 PF00293 NUDIX domain CJF59_12890 PF13344 Haloacid dehalogenase-like hydrolase CJF59_12895 PF13277 YmdB-like protein CJF59_12900 PF01812 5-formyltetrahydrofolate cyclo-ligase family CJF59_12925 PF01791 DeoC/LacD family aldolase CJF59_12930 PF02581 Thiamine monophosphate synthase CJF59_12950 PF00152 tRNA synthetases class II (D, K and N) CJF59_12955 PF04055 Radical SAM superfamily CJF59_12955 PF12544 Lysine-2,3-aminomutase CJF59_12965 PF00557 Metallopeptidase family M24 CJF59_12970 PF07943 Penicillin-binding protein 5, C-terminal domain CJF59_12970 PF00768 D-alanyl-D-alanine carboxypeptidase CJF59_12975 PF02617 ATP-dependent Clp protease adaptor protein ClpS CJF59_12980 PF02861 Clp amino terminal domain, pathogenicity island component CJF59_12980 PF17871 AAA lid domain CJF59_12980 PF07724 AAA domain (Cdc48 subfamily) CJF59_12980 PF00004 ATPase family associated with various cellular activities (AAA) CJF59_12980 PF10431 C-terminal, D2-small domain, of ClpB protein CJF59_12990 PF03976 Polyphosphate kinase 2 (PPK2) CJF59_12995 PF02622 Uncharacterized ACR, COG1678 CJF59_13000 PF03668 P-loop ATPase protein family CJF59_13010 PF13756 Stimulus-sensing domain CJF59_13010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJF59_13010 PF00512 His Kinase A (phospho-acceptor) domain CJF59_13010 PF13755 Sensor N-terminal transmembrane domain CJF59_13010 PF00672 HAMP domain CJF59_13015 PF00072 Response regulator receiver domain CJF59_13015 PF00486 Transcriptional regulatory protein, C terminal CJF59_13020 PF01025 GrpE CJF59_13025 PF00012 Hsp70 protein CJF59_13030 PF00684 DnaJ central domain CJF59_13030 PF01556 DnaJ C terminal domain CJF59_13030 PF00226 DnaJ domain CJF59_13035 PF01113 Dihydrodipicolinate reductase, N-terminus CJF59_13035 PF05173 Dihydrodipicolinate reductase, C-terminus CJF59_13040 PF02773 S-adenosylmethionine synthetase, C-terminal domain CJF59_13040 PF00438 S-adenosylmethionine synthetase, N-terminal domain CJF59_13040 PF02772 S-adenosylmethionine synthetase, central domain CJF59_13045 PF02390 Putative methyltransferase CJF59_13050 PF01808 AICARFT/IMPCHase bienzyme CJF59_13050 PF02142 MGS-like domain CJF59_13065 PF00892 EamA-like transporter family CJF59_13070 PF05746 DALR anticodon binding domain CJF59_13070 PF02092 Glycyl-tRNA synthetase beta subunit CJF59_13075 PF02091 Glycyl-tRNA synthetase alpha subunit CJF59_13085 PF01381 Helix-turn-helix CJF59_13090 PF00795 Carbon-nitrogen hydrolase CJF59_13100 PF01475 Ferric uptake regulator family CJF59_13110 PF07497 Rho termination factor, RNA-binding domain CJF59_13110 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CJF59_13110 PF07498 Rho termination factor, N-terminal domain CJF59_13120 PF01544 CorA-like Mg2+ transporter protein CJF59_13125 PF00291 Pyridoxal-phosphate dependent enzyme CJF59_13130 PF00290 Tryptophan synthase alpha chain CJF59_13135 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJF59_13135 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CJF59_13145 PF13393 Histidyl-tRNA synthetase CJF59_13150 PF00709 Adenylosuccinate synthetase CJF59_13155 PF00072 Response regulator receiver domain CJF59_13155 PF00486 Transcriptional regulatory protein, C terminal CJF59_13160 PF11808 Phosphate regulon sensor protein PhoR CJF59_13160 PF00989 PAS fold CJF59_13160 PF00512 His Kinase A (phospho-acceptor) domain CJF59_13160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJF59_13165 PF12849 PBP superfamily domain CJF59_13185 PF00328 Histidine phosphatase superfamily (branch 2) CJF59_13190 PF01595 Cyclin M transmembrane N-terminal domain CJF59_13190 PF00571 CBS domain CJF59_13190 PF03471 Transporter associated domain CJF59_13195 PF08240 Alcohol dehydrogenase GroES-like domain CJF59_13195 PF00107 Zinc-binding dehydrogenase CJF59_13200 PF00005 ABC transporter CJF59_13200 PF03412 Peptidase C39 family CJF59_13200 PF00664 ABC transporter transmembrane region CJF59_13225 PF01118 Semialdehyde dehydrogenase, NAD binding domain CJF59_13230 PF03819 MazG nucleotide pyrophosphohydrolase domain CJF59_13240 PF00183 Hsp90 protein CJF59_13255 PF13495 Phage integrase, N-terminal SAM-like domain CJF59_13255 PF00589 Phage integrase family CJF59_13345 PF01381 Helix-turn-helix CJF59_13370 PF00436 Single-strand binding protein family CJF59_13385 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) CJF59_13665 PF01757 Acyltransferase family CJF59_13690 PF09856 Predicted transcriptional regulator (DUF2083) CJF59_13690 PF06114 IrrE N-terminal-like domain CJF59_13690 PF01381 Helix-turn-helix CJF59_13695 PF03972 MmgE/PrpD family CJF59_13700 PF00285 Citrate synthase, C-terminal domain CJF59_13710 PF16177 Acetyl-coenzyme A synthetase N-terminus CJF59_13710 PF00501 AMP-binding enzyme CJF59_13710 PF13193 AMP-binding enzyme C-terminal domain CJF59_13715 PF07690 Major Facilitator Superfamily CJF59_13730 PF02073 Thermophilic metalloprotease (M29) CJF59_13745 PF02938 GAD domain CJF59_13745 PF00152 tRNA synthetases class II (D, K and N) CJF59_13745 PF01336 OB-fold nucleic acid binding domain CJF59_13750 PF01212 Beta-eliminating lyase CJF59_13755 PF01386 Ribosomal L25p family CJF59_13755 PF14693 Ribosomal protein TL5, C-terminal domain CJF59_13760 PF01195 Peptidyl-tRNA hydrolase CJF59_13765 PF01926 50S ribosome-binding GTPase CJF59_13765 PF06071 Protein of unknown function (DUF933) CJF59_13770 PF00171 Aldehyde dehydrogenase family CJF59_13775 PF01467 Cytidylyltransferase-like CJF59_13785 PF02590 Predicted SPOUT methyltransferase CJF59_13795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJF59_13795 PF03466 LysR substrate binding domain CJF59_13800 PF03306 Alpha-acetolactate decarboxylase CJF59_13805 PF00205 Thiamine pyrophosphate enzyme, central domain CJF59_13805 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CJF59_13805 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CJF59_13815 PF00205 Thiamine pyrophosphate enzyme, central domain CJF59_13815 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CJF59_13815 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CJF59_13820 PF02754 Cysteine-rich domain CJF59_13825 PF11870 Domain of unknown function (DUF3390) CJF59_13825 PF13183 4Fe-4S dicluster domain CJF59_13825 PF02589 LUD domain CJF59_13835 PF13536 Putative multidrug resistance efflux transporter CJF59_13840 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CJF59_13845 PF00692 dUTPase CJF59_13860 PF04794 YdjC-like protein CJF59_13895 PF06463 Molybdenum Cofactor Synthesis C CJF59_13895 PF04055 Radical SAM superfamily CJF59_13900 PF03471 Transporter associated domain CJF59_13900 PF01595 Cyclin M transmembrane N-terminal domain CJF59_13900 PF00571 CBS domain CJF59_13905 PF01464 Transglycosylase SLT domain CJF59_13910 PF03167 Uracil DNA glycosylase superfamily CJF59_13920 PF08544 GHMP kinases C terminal CJF59_13920 PF00288 GHMP kinases N terminal domain CJF59_13930 PF00106 short chain dehydrogenase CJF59_13945 PF01554 MatE CJF59_13950 PF00005 ABC transporter CJF59_13960 PF14572 Phosphoribosyl synthetase-associated domain CJF59_13960 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CJF59_14005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJF59_14005 PF03466 LysR substrate binding domain CJF59_14010 PF00999 Sodium/hydrogen exchanger family CJF59_14015 PF00593 TonB dependent receptor CJF59_14015 PF07715 TonB-dependent Receptor Plug Domain CJF59_14025 PF01032 FecCD transport family CJF59_14030 PF00005 ABC transporter CJF59_14035 PF00728 Glycosyl hydrolase family 20, catalytic domain CJF59_14035 PF07691 PA14 domain CJF59_14035 PF02838 Glycosyl hydrolase family 20, domain 2 CJF59_14040 PF01869 BadF/BadG/BcrA/BcrD ATPase family CJF59_14045 PF13580 SIS domain CJF59_14065 PF03441 FAD binding domain of DNA photolyase CJF59_14065 PF00875 DNA photolyase CJF59_14070 PF01641 SelR domain CJF59_14085 PF00155 Aminotransferase class I and II CJF59_14100 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CJF59_14100 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CJF59_14130 PF03466 LysR substrate binding domain CJF59_14130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJF59_14140 PF07291 Methylamine utilisation protein MauE CJF59_14145 PF00578 AhpC/TSA family CJF59_14150 PF02975 Methylamine dehydrogenase, L chain CJF59_14165 PF00578 AhpC/TSA family CJF59_14175 PF00248 Aldo/keto reductase family CJF59_14180 PF03466 LysR substrate binding domain CJF59_14180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJF59_14185 PF00171 Aldehyde dehydrogenase family CJF59_14190 PF00034 Cytochrome c CJF59_14190 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CJF59_14195 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CJF59_14200 PF01799 [2Fe-2S] binding domain CJF59_14200 PF00111 2Fe-2S iron-sulfur cluster binding domain CJF59_14245 PF02796 Helix-turn-helix domain of resolvase CJF59_14245 PF00239 Resolvase, N terminal domain CJF59_14280 PF13098 Thioredoxin-like domain CJF59_14345 PF05016 ParE toxin of type II toxin-antitoxin system, parDE CJF59_14370 PF01527 Transposase CJF59_14385 PF00534 Glycosyl transferases group 1 CJF59_14385 PF13439 Glycosyltransferase Family 4 CJF59_14420 PF03050 Transposase IS66 family CJF59_14420 PF13817 IS66 C-terminal element CJF59_14420 PF13007 Transposase C of IS166 homeodomain CJF59_14420 PF13005 zinc-finger binding domain of transposase IS66 CJF59_14430 PF01527 Transposase CJF59_14480 PF13276 HTH-like domain CJF59_14480 PF13333 Integrase core domain CJF59_14480 PF00665 Integrase core domain CJF59_14560 PF01475 Ferric uptake regulator family CJF59_14570 PF01227 GTP cyclohydrolase I CJF59_14575 PF01502 Phosphoribosyl-AMP cyclohydrolase CJF59_14580 PF07683 Cobalamin synthesis protein cobW C-terminal domain CJF59_14580 PF02492 CobW/HypB/UreG, nucleotide-binding domain CJF59_14595 PF11800 Replication protein C C-terminal region CJF59_14595 PF03428 Replication protein C N-terminal domain CJF59_14625 PF03547 Membrane transport protein CJF59_14635 PF13340 Putative transposase of IS4/5 family (DUF4096) CJF59_14650 PF02371 Transposase IS116/IS110/IS902 family CJF59_14650 PF01548 Transposase CJF59_14660 PF02515 CoA-transferase family III CJF59_14665 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CJF59_14665 PF00205 Thiamine pyrophosphate enzyme, central domain CJF59_14665 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CJF59_14670 PF02515 CoA-transferase family III CJF59_14730 PF02082 Transcriptional regulator CJF59_14740 PF12833 Helix-turn-helix domain CJF59_14740 PF01965 DJ-1/PfpI family CJF59_14745 PF00106 short chain dehydrogenase CJF59_14750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJF59_14750 PF03466 LysR substrate binding domain CJF59_14770 PF01845 CcdB protein CJF59_14790 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system CJF59_14795 PF00756 Putative esterase CJF59_14805 PF00107 Zinc-binding dehydrogenase CJF59_14805 PF08240 Alcohol dehydrogenase GroES-like domain CJF59_14810 PF02583 Metal-sensitive transcriptional repressor CJF59_14855 PF02195 ParB-like nuclease domain CJF59_14855 PF17762 HTH domain found in ParB protein CJF59_14890 PF18818 Metallopeptidase superfamily domain CJF59_14890 PF08401 Domain of unknown function (DUF1738) CJF59_14905 PF00436 Single-strand binding protein family CJF59_14920 PF00580 UvrD/REP helicase N-terminal domain CJF59_14920 PF13361 UvrD-like helicase C-terminal domain CJF59_14955 PF18766 SWI2/SNF2 ATPase CJF59_14955 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CJF59_14955 PF11867 Domain of unknown function (DUF3387) CJF59_14970 PF01420 Type I restriction modification DNA specificity domain CJF59_14975 PF01909 Nucleotidyltransferase domain CJF59_14985 PF02384 N-6 DNA Methylase CJF59_15010 PF01381 Helix-turn-helix CJF59_15060 PF05443 ROS/MUCR transcriptional regulator protein CJF59_15095 PF00436 Single-strand binding protein family CJF59_15115 PF01850 PIN domain CJF59_15170 PF00216 Bacterial DNA-binding protein CJF59_15180 PF02796 Helix-turn-helix domain of resolvase CJF59_15180 PF00239 Resolvase, N terminal domain CJF59_15205 PF00535 Glycosyl transferase family 2 CJF59_15235 PF05016 ParE toxin of type II toxin-antitoxin system, parDE CJF59_15245 PF02661 Fic/DOC family CJF59_15255 PF11800 Replication protein C C-terminal region CJF59_15255 PF03428 Replication protein C N-terminal domain CJF59_15265 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) CJF59_15270 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system CJF59_15295 PF00239 Resolvase, N terminal domain CJF59_15295 PF02796 Helix-turn-helix domain of resolvase CJF59_15325 PF01381 Helix-turn-helix CJF59_15335 PF12161 HsdM N-terminal domain CJF59_15335 PF02384 N-6 DNA Methylase CJF59_15340 PF01420 Type I restriction modification DNA specificity domain CJF59_15345 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CJF59_15345 PF18766 SWI2/SNF2 ATPase CJF59_15345 PF11867 Domain of unknown function (DUF3387) CJF59_15355 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CJF59_15360 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system