CJF59_00120 SM00507 HNH nucleases CJF59_00255 SM01228 CJF59_00255 CJF59_00270 SM00470 ParB-like nuclease domain CJF59_00365 SM00411 bacterial (prokaryotic) histone like domain CJF59_00400 SM00271 DnaJ molecular chaperone homology domain CJF59_00435 SM00957 SecA DEAD-like domain CJF59_00435 SM00958 SecA preprotein cross-linking domain CJF59_00450 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CJF59_00455 SM00382 ATPases associated with a variety of cellular activities CJF59_00500 SM00382 ATPases associated with a variety of cellular activities CJF59_00515 SM00448 cheY-homologous receiver domain CJF59_00515 SM00862 Transcriptional regulatory protein, C terminal CJF59_00555 SM00840 CJF59_00555 CJF59_00605 SM00382 ATPases associated with a variety of cellular activities CJF59_00605 SM00843 CJF59_00605 CJF59_00640 SM00855 Phosphoglycerate mutase family CJF59_00690 SM00363 S4 RNA-binding domain CJF59_00705 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CJF59_00710 SM00100 Cyclic nucleotide-monophosphate binding domain CJF59_00710 SM00419 helix_turn_helix, cAMP Regulatory protein CJF59_00720 SM00729 Elongator protein 3, MiaB family, Radical SAM CJF59_00735 SM00893 Electron transfer flavoprotein domain CJF59_00740 SM00893 Electron transfer flavoprotein domain CJF59_00790 SM01007 Class II Aldolase and Adducin N-terminal domain CJF59_00850 SM00530 Helix-turn-helix XRE-family like proteins CJF59_00905 SM00478 endonuclease III CJF59_00915 SM00478 endonuclease III CJF59_00920 SM00382 ATPases associated with a variety of cellular activities CJF59_00930 SM00845 GatB domain CJF59_00945 SM00732 Likely ribonuclease with RNase H fold. CJF59_01015 SM00878 Biotin carboxylase C-terminal domain CJF59_01055 SM00382 ATPases associated with a variety of cellular activities CJF59_01065 SM00382 ATPases associated with a variety of cellular activities CJF59_01070 SM00062 Bacterial periplasmic substrate-binding proteins CJF59_01070 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CJF59_01085 SM00382 ATPases associated with a variety of cellular activities CJF59_01100 SM00316 Ribosomal protein S1-like RNA-binding domain CJF59_01100 SM00322 K homology RNA-binding domain CJF59_01120 SM00344 helix_turn_helix ASNC type CJF59_01125 SM01005 Alanine racemase, C-terminal domain CJF59_01190 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CJF59_01200 SM00829 Enoylreductase CJF59_01225 SM00382 ATPases associated with a variety of cellular activities CJF59_01265 SM00487 DEAD-like helicases superfamily CJF59_01265 SM00490 helicase superfamily c-terminal domain CJF59_01285 SM00729 Elongator protein 3, MiaB family, Radical SAM CJF59_01290 SM00382 ATPases associated with a variety of cellular activities CJF59_01290 SM00962 SRP54-type protein, GTPase domain CJF59_01290 SM00963 SRP54-type protein, helical bundle domain CJF59_01365 SM01018 B12 binding domain CJF59_01375 SM00382 ATPases associated with a variety of cellular activities CJF59_01385 SM00671 Sel1-like repeats. CJF59_01415 SM00382 ATPases associated with a variety of cellular activities CJF59_01430 SM01387 CJF59_01430 CJF59_01435 SM00316 Ribosomal protein S1-like RNA-binding domain CJF59_01435 SM00322 K homology RNA-binding domain CJF59_01450 SM00434 DNA Topoisomerase IV CJF59_01480 SM00530 Helix-turn-helix XRE-family like proteins CJF59_01515 SM00479 CJF59_01515 CJF59_01585 SM00507 HNH nucleases CJF59_01780 SM00849 Metallo-beta-lactamase superfamily CJF59_01825 SM00347 helix_turn_helix multiple antibiotic resistance protein CJF59_01840 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CJF59_01915 SM00849 Metallo-beta-lactamase superfamily CJF59_01925 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CJF59_01995 SM00988 UreE urease accessory protein, N-terminal domain CJF59_02020 SM00421 helix_turn_helix, Lux Regulon CJF59_02020 SM00448 cheY-homologous receiver domain CJF59_02025 SM00387 Histidine kinase-like ATPases CJF59_02025 SM00388 His Kinase A (phosphoacceptor) domain CJF59_02025 SM00448 cheY-homologous receiver domain CJF59_02045 SM00382 ATPases associated with a variety of cellular activities CJF59_02050 SM00382 ATPases associated with a variety of cellular activities CJF59_02100 SM00345 helix_turn_helix gluconate operon transcriptional repressor CJF59_02115 SM00729 Elongator protein 3, MiaB family, Radical SAM CJF59_02170 SM00345 helix_turn_helix gluconate operon transcriptional repressor CJF59_02180 SM01130 CJF59_02180 CJF59_02185 SM01007 Class II Aldolase and Adducin N-terminal domain CJF59_02200 SM00342 helix_turn_helix, arabinose operon control protein CJF59_02205 SM00382 ATPases associated with a variety of cellular activities CJF59_02210 SM00382 ATPases associated with a variety of cellular activities CJF59_02250 SM00422 helix_turn_helix, mercury resistance CJF59_02295 SM00901 CJF59_02295 CJF59_02370 SM00530 Helix-turn-helix XRE-family like proteins CJF59_02450 SM00729 Elongator protein 3, MiaB family, Radical SAM CJF59_02465 SM00829 Enoylreductase CJF59_02510 SM01350 CJF59_02510 CJF59_02520 SM00861 Transketolase, pyrimidine binding domain CJF59_02525 SM00248 ankyrin repeats CJF59_02550 SM00382 ATPases associated with a variety of cellular activities CJF59_02655 SM00857 Resolvase, N terminal domain CJF59_02660 SM00487 DEAD-like helicases superfamily CJF59_02660 SM00490 helicase superfamily c-terminal domain CJF59_02715 SM00382 ATPases associated with a variety of cellular activities CJF59_02725 SM00903 Flavin reductase like domain CJF59_02745 SM00347 helix_turn_helix multiple antibiotic resistance protein CJF59_02755 SM00833 Cobalamin synthesis protein cobW C-terminal domain CJF59_02770 SM00855 Phosphoglycerate mutase family CJF59_02890 SM00857 Resolvase, N terminal domain CJF59_02955 SM00382 ATPases associated with a variety of cellular activities CJF59_02970 SM00530 Helix-turn-helix XRE-family like proteins CJF59_03040 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CJF59_03110 SM00563 Phosphate acyltransferases CJF59_03120 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CJF59_03120 SM00474 3'-5' exonuclease CJF59_03120 SM00475 5'-3' exonuclease CJF59_03120 SM00482 DNA polymerase A domain CJF59_03135 SM00382 ATPases associated with a variety of cellular activities CJF59_03145 SM00363 S4 RNA-binding domain CJF59_03190 SM00729 Elongator protein 3, MiaB family, Radical SAM CJF59_03240 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CJF59_03245 SM00836 DALR anticodon binding domain CJF59_03245 SM01016 Arginyl tRNA synthetase N terminal dom CJF59_03355 SM00857 Resolvase, N terminal domain CJF59_03365 SM00470 ParB-like nuclease domain CJF59_03470 SM00479 CJF59_03470 CJF59_03490 SM00411 bacterial (prokaryotic) histone like domain CJF59_03535 SM00345 helix_turn_helix gluconate operon transcriptional repressor CJF59_03535 SM00895 CJF59_03535 CJF59_03645 SM00953 CJF59_03645 CJF59_03665 SM00965 Secretin and TonB N terminus short domain CJF59_03725 SM00342 helix_turn_helix, arabinose operon control protein CJF59_03745 SM00849 Metallo-beta-lactamase superfamily CJF59_03750 SM00421 helix_turn_helix, Lux Regulon CJF59_03770 SM00344 helix_turn_helix ASNC type CJF59_03795 SM00448 cheY-homologous receiver domain CJF59_03795 SM00862 Transcriptional regulatory protein, C terminal CJF59_03800 SM00387 Histidine kinase-like ATPases CJF59_03800 SM00388 His Kinase A (phosphoacceptor) domain CJF59_03845 SM00347 helix_turn_helix multiple antibiotic resistance protein CJF59_03865 SM00971 Serine acetyltransferase, N-terminal CJF59_03905 SM00450 Rhodanese Homology Domain CJF59_04060 SM00460 Transglutaminase/protease-like homologues CJF59_04100 SM00507 HNH nucleases CJF59_04165 SM00316 Ribosomal protein S1-like RNA-binding domain CJF59_04175 SM00316 Ribosomal protein S1-like RNA-binding domain CJF59_04190 SM00316 Ribosomal protein S1-like RNA-binding domain CJF59_04195 SM00646 CJF59_04195 CJF59_04275 SM00028 Tetratricopeptide repeats CJF59_04285 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CJF59_04300 SM00387 Histidine kinase-like ATPases CJF59_04300 SM00388 His Kinase A (phosphoacceptor) domain CJF59_04305 SM00448 cheY-homologous receiver domain CJF59_04305 SM00862 Transcriptional regulatory protein, C terminal CJF59_04315 SM00382 ATPases associated with a variety of cellular activities CJF59_04320 SM00562 CJF59_04320 CJF59_04325 SM00729 Elongator protein 3, MiaB family, Radical SAM CJF59_04345 SM00507 HNH nucleases CJF59_04385 SM00481 DNA polymerase alpha chain like domain CJF59_04430 SM00434 DNA Topoisomerase IV CJF59_04440 SM01004 Delta-aminolevulinic acid dehydratase CJF59_04470 SM00487 DEAD-like helicases superfamily CJF59_04470 SM00490 helicase superfamily c-terminal domain CJF59_04585 SM00292 breast cancer carboxy-terminal domain CJF59_04585 SM00532 Ligase N family CJF59_04605 SM00864 Tubulin/FtsZ family, GTPase domain CJF59_04605 SM00865 Tubulin/FtsZ family, C-terminal domain CJF59_04610 SM00842 Cell division protein FtsA CJF59_04715 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CJF59_04740 SM00857 Resolvase, N terminal domain CJF59_04895 SM00852 Probable molybdopterin binding domain CJF59_04940 SM01323 CJF59_04940 CJF59_04945 SM00487 DEAD-like helicases superfamily CJF59_04945 SM00490 helicase superfamily c-terminal domain CJF59_05025 SM00883 Chaperonin 10 Kd subunit CJF59_05035 SM00357 Cold shock protein domain CJF59_05040 SM00491 CJF59_05040 CJF59_05050 SM00841 Elongation factor P, C-terminal CJF59_05050 SM01185 CJF59_05050 CJF59_05080 SM00971 Serine acetyltransferase, N-terminal CJF59_05085 SM00938 Nitrogen regulatory protein P-II CJF59_05090 SM00984 UDP binding domain CJF59_05170 SM00091 PAS domain CJF59_05170 SM00387 Histidine kinase-like ATPases CJF59_05170 SM00388 His Kinase A (phosphoacceptor) domain CJF59_05175 SM00382 ATPases associated with a variety of cellular activities CJF59_05175 SM00448 cheY-homologous receiver domain CJF59_05180 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CJF59_05180 SM00387 Histidine kinase-like ATPases CJF59_05180 SM00388 His Kinase A (phosphoacceptor) domain CJF59_05185 SM00382 ATPases associated with a variety of cellular activities CJF59_05185 SM00448 cheY-homologous receiver domain CJF59_05205 SM00382 ATPases associated with a variety of cellular activities CJF59_05205 SM01086 C-terminal, D2-small domain, of ClpB protein CJF59_05280 SM00564 beta-propeller repeat CJF59_05285 SM00382 ATPases associated with a variety of cellular activities CJF59_05315 SM00382 ATPases associated with a variety of cellular activities CJF59_05320 SM00363 S4 RNA-binding domain CJF59_05340 SM00382 ATPases associated with a variety of cellular activities CJF59_05340 SM00962 SRP54-type protein, GTPase domain CJF59_05340 SM00963 SRP54-type protein, helical bundle domain CJF59_05375 SM01329 CJF59_05375 CJF59_05395 SM00347 helix_turn_helix multiple antibiotic resistance protein CJF59_05400 SM00448 cheY-homologous receiver domain CJF59_05400 SM00862 Transcriptional regulatory protein, C terminal CJF59_05405 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CJF59_05405 SM00387 Histidine kinase-like ATPases CJF59_05405 SM00388 His Kinase A (phosphoacceptor) domain CJF59_05435 SM00411 bacterial (prokaryotic) histone like domain CJF59_05440 SM00422 helix_turn_helix, mercury resistance CJF59_05460 SM00986 Uracil DNA glycosylase superfamily CJF59_05460 SM00987 UreE urease accessory protein, C-terminal domain CJF59_05465 SM00411 bacterial (prokaryotic) histone like domain CJF59_05485 SM00344 helix_turn_helix ASNC type CJF59_05530 SM00978 CJF59_05530 CJF59_05560 SM00028 Tetratricopeptide repeats CJF59_05565 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CJF59_05565 SM00534 ATPase domain of DNA mismatch repair MUTS family CJF59_05570 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CJF59_05580 SM00382 ATPases associated with a variety of cellular activities CJF59_05595 SM00838 Elongation factor G C-terminus CJF59_05595 SM00889 Elongation factor G, domain IV CJF59_05625 SM00382 ATPases associated with a variety of cellular activities CJF59_05660 SM00487 DEAD-like helicases superfamily CJF59_05660 SM00490 helicase superfamily c-terminal domain CJF59_05690 SM00382 ATPases associated with a variety of cellular activities CJF59_05690 SM00994 ClpX C4-type zinc finger CJF59_05690 SM01086 C-terminal, D2-small domain, of ClpB protein CJF59_05695 SM00382 ATPases associated with a variety of cellular activities CJF59_05695 SM00464 Found in ATP-dependent protease La (LON) CJF59_05700 SM00411 bacterial (prokaryotic) histone like domain CJF59_05735 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CJF59_05740 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CJF59_05785 SM00849 Metallo-beta-lactamase superfamily CJF59_05800 SM00382 ATPases associated with a variety of cellular activities CJF59_05810 SM00346 helix_turn_helix isocitrate lyase regulation CJF59_05925 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CJF59_05990 SM00422 helix_turn_helix, mercury resistance CJF59_06070 SM00487 DEAD-like helicases superfamily CJF59_06095 SM01101 CJF59_06095 CJF59_06140 SM00829 Enoylreductase CJF59_06155 SM00382 ATPases associated with a variety of cellular activities CJF59_06180 SM00870 CJF59_06180 CJF59_06190 SM00671 Sel1-like repeats. CJF59_06200 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. CJF59_06205 SM00382 ATPases associated with a variety of cellular activities CJF59_06210 SM00382 ATPases associated with a variety of cellular activities CJF59_06250 SM00729 Elongator protein 3, MiaB family, Radical SAM CJF59_06290 SM00014 Acid phosphatase homologues CJF59_06300 SM00382 ATPases associated with a variety of cellular activities CJF59_06305 SM00382 ATPases associated with a variety of cellular activities CJF59_06325 SM00116 Domain in cystathionine beta-synthase and other proteins. CJF59_06325 SM01240 CJF59_06325 CJF59_06345 SM00448 cheY-homologous receiver domain CJF59_06345 SM00862 Transcriptional regulatory protein, C terminal CJF59_06390 SM00363 S4 RNA-binding domain CJF59_06395 SM00861 Transketolase, pyrimidine binding domain CJF59_06435 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CJF59_06455 SM00852 Probable molybdopterin binding domain CJF59_06495 SM00890 Domain of unknown function CJF59_06560 SM00564 beta-propeller repeat CJF59_06585 SM00886 Stress responsive A/B Barrel Domain CJF59_06695 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CJF59_06700 SM00382 ATPases associated with a variety of cellular activities CJF59_06705 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CJF59_06730 SM00833 Cobalamin synthesis protein cobW C-terminal domain CJF59_06780 SM00822 CJF59_06780 CJF59_06810 SM00965 Secretin and TonB N terminus short domain CJF59_06855 SM00342 helix_turn_helix, arabinose operon control protein CJF59_06870 SM01359 CJF59_06870 CJF59_06870 SM01360 CJF59_06870 CJF59_06915 SM00965 Secretin and TonB N terminus short domain CJF59_06955 SM00382 ATPases associated with a variety of cellular activities CJF59_06960 SM00062 Bacterial periplasmic substrate-binding proteins CJF59_06975 SM00965 Secretin and TonB N terminus short domain CJF59_06990 SM00965 Secretin and TonB N terminus short domain CJF59_07030 SM00529 Helix-turn-helix diphteria tox regulatory element CJF59_07050 SM00382 ATPases associated with a variety of cellular activities CJF59_07105 SM00796 Allophanate hydrolase subunit 1 CJF59_07105 SM00797 Allophanate hydrolase subunit 2 CJF59_07105 SM00878 Biotin carboxylase C-terminal domain CJF59_07125 SM00382 ATPases associated with a variety of cellular activities CJF59_07210 SM00382 ATPases associated with a variety of cellular activities CJF59_07245 SM01068 Putative carbohydrate binding domain CJF59_07260 SM01060 CJF59_07260 CJF59_07305 SM00382 ATPases associated with a variety of cellular activities CJF59_07385 SM01092 CO dehydrogenase flavoprotein C-terminal domain CJF59_07390 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CJF59_07445 SM00382 ATPases associated with a variety of cellular activities CJF59_07485 SM00829 Enoylreductase CJF59_07495 SM00382 ATPases associated with a variety of cellular activities CJF59_07500 SM00448 cheY-homologous receiver domain CJF59_07520 SM00387 Histidine kinase-like ATPases CJF59_07525 SM00382 ATPases associated with a variety of cellular activities CJF59_07530 SM00382 ATPases associated with a variety of cellular activities CJF59_07540 SM00341 Helicase and RNase D C-terminal CJF59_07540 SM00487 DEAD-like helicases superfamily CJF59_07540 SM00490 helicase superfamily c-terminal domain CJF59_07540 SM00956 CJF59_07540 CJF59_07545 SM00420 helix_turn_helix, Deoxyribose operon repressor CJF59_07545 SM01134 CJF59_07545 CJF59_07590 SM00822 CJF59_07590 CJF59_07640 SM00382 ATPases associated with a variety of cellular activities CJF59_07665 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain CJF59_07665 SM01232 CJF59_07665 CJF59_07675 SM00382 ATPases associated with a variety of cellular activities CJF59_07675 SM00760 Bacterial dnaA protein helix-turn-helix domain CJF59_07680 SM00480 DNA polymerase III beta subunit CJF59_07690 SM00387 Histidine kinase-like ATPases CJF59_07690 SM00433 TopoisomeraseII CJF59_07750 SM00861 Transketolase, pyrimidine binding domain CJF59_07765 SM00729 Elongator protein 3, MiaB family, Radical SAM CJF59_07800 SM00998 Adenylosuccinate lyase C-terminus CJF59_07820 SM01211 CJF59_07820 CJF59_07850 SM00155 Phospholipase D. Active site motifs. CJF59_07865 SM00450 Rhodanese Homology Domain CJF59_07875 SM00382 ATPases associated with a variety of cellular activities CJF59_07905 SM01130 CJF59_07905 CJF59_07915 SM00357 Cold shock protein domain CJF59_07945 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CJF59_07950 SM00822 CJF59_07950 CJF59_07960 SM00825 Beta-ketoacyl synthase CJF59_08030 SM00729 Elongator protein 3, MiaB family, Radical SAM CJF59_08030 SM00876 Biotin and Thiamin Synthesis associated domain CJF59_08080 SM00849 Metallo-beta-lactamase superfamily CJF59_08105 SM00936 Penicillin-binding protein 5, C-terminal domain CJF59_08170 SM00937 CJF59_08170 CJF59_08185 SM00530 Helix-turn-helix XRE-family like proteins CJF59_08235 SM00729 Elongator protein 3, MiaB family, Radical SAM CJF59_08270 SM00271 DnaJ molecular chaperone homology domain CJF59_08280 SM00327 von Willebrand factor (vWF) type A domain CJF59_08300 SM00487 DEAD-like helicases superfamily CJF59_08300 SM00490 helicase superfamily c-terminal domain CJF59_08300 SM00982 CJF59_08300 CJF59_08300 SM01058 CarD-like/TRCF domain CJF59_08310 SM00487 DEAD-like helicases superfamily CJF59_08310 SM00490 helicase superfamily c-terminal domain CJF59_08340 SM01192 CJF59_08340 CJF59_08340 SM01193 CJF59_08340 CJF59_08355 SM00852 Probable molybdopterin binding domain CJF59_08405 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CJF59_08405 SM00465 GIY-YIG type nucleases (URI domain) CJF59_08430 SM00563 Phosphate acyltransferases CJF59_08435 SM00729 Elongator protein 3, MiaB family, Radical SAM CJF59_08450 SM00116 Domain in cystathionine beta-synthase and other proteins. CJF59_08450 SM01091 Transporter associated domain CJF59_08485 SM00830 Chorismate mutase type II CJF59_08490 SM00855 Phosphoglycerate mutase family CJF59_08585 SM01001 AIR carboxylase CJF59_08620 SM01329 CJF59_08620 CJF59_08635 SM00363 S4 RNA-binding domain CJF59_08635 SM01390 CJF59_08635 CJF59_08645 SM00100 Cyclic nucleotide-monophosphate binding domain CJF59_08670 SM00873 B3/4 domain CJF59_08670 SM00874 tRNA synthetase B5 domain CJF59_08670 SM00896 Ferredoxin-fold anticodon binding domain CJF59_08705 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CJF59_08715 SM00382 ATPases associated with a variety of cellular activities CJF59_08715 SM01086 C-terminal, D2-small domain, of ClpB protein CJF59_08725 SM00091 PAS domain CJF59_08725 SM00387 Histidine kinase-like ATPases CJF59_08725 SM00388 His Kinase A (phosphoacceptor) domain CJF59_08725 SM00448 cheY-homologous receiver domain CJF59_08730 SM00387 Histidine kinase-like ATPases CJF59_08730 SM00388 His Kinase A (phosphoacceptor) domain CJF59_08745 SM00382 ATPases associated with a variety of cellular activities CJF59_08770 SM01058 CarD-like/TRCF domain CJF59_08775 SM00028 Tetratricopeptide repeats CJF59_08815 SM00345 helix_turn_helix gluconate operon transcriptional repressor CJF59_08815 SM00895 CJF59_08815 CJF59_08820 SM00382 ATPases associated with a variety of cellular activities CJF59_08850 SM00650 Ribosomal RNA adenine dimethylases CJF59_08885 SM00400 zinc finger CJF59_08885 SM00493 CJF59_08885 CJF59_08895 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain CJF59_08900 SM00851 MGS-like domain CJF59_08900 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CJF59_08930 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CJF59_08930 SM00245 tail specific protease CJF59_08955 SM00382 ATPases associated with a variety of cellular activities CJF59_08970 SM00382 ATPases associated with a variety of cellular activities CJF59_09045 SM00382 ATPases associated with a variety of cellular activities CJF59_09065 SM00662 RNA polymerases D CJF59_09130 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CJF59_09135 SM01374 CJF59_09135 CJF59_09155 SM00322 K homology RNA-binding domain CJF59_09170 SM01382 CJF59_09170 CJF59_09170 SM01383 CJF59_09170 CJF59_09190 SM01403 CJF59_09190 CJF59_09210 SM00663 RNA polymerase I subunit A N-terminus CJF59_09240 SM00649 Ribosomal protein L11/L12 CJF59_09260 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CJF59_09260 SM00387 Histidine kinase-like ATPases CJF59_09260 SM00388 His Kinase A (phosphoacceptor) domain CJF59_09265 SM00448 cheY-homologous receiver domain CJF59_09265 SM00862 Transcriptional regulatory protein, C terminal CJF59_09430 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain CJF59_09485 SM00479 CJF59_09485 CJF59_09540 SM00829 Enoylreductase CJF59_09545 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CJF59_09590 SM00717 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains CJF59_09745 SM00342 helix_turn_helix, arabinose operon control protein CJF59_09825 SM00463 Small MutS-related domain CJF59_09830 SM01235 CJF59_09830 CJF59_09840 SM00978 CJF59_09840 CJF59_09845 SM00855 Phosphoglycerate mutase family CJF59_09890 SM00852 Probable molybdopterin binding domain CJF59_09925 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CJF59_09975 SM00849 Metallo-beta-lactamase superfamily CJF59_09985 SM00563 Phosphate acyltransferases CJF59_09990 SM00996 S-adenosyl-L-homocysteine hydrolase CJF59_09990 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CJF59_10015 SM00861 Transketolase, pyrimidine binding domain CJF59_10050 SM01207 CJF59_10050 CJF59_10060 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CJF59_10060 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CJF59_10060 SM00493 CJF59_10060 CJF59_10065 SM00955 CJF59_10065 CJF59_10070 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CJF59_10070 SM00245 tail specific protease CJF59_10105 SM00387 Histidine kinase-like ATPases CJF59_10105 SM00433 TopoisomeraseII CJF59_10120 SM00853 MutL C terminal dimerisation domain CJF59_10120 SM01340 CJF59_10120 CJF59_10140 SM00904 Riboflavin kinase CJF59_10155 SM01007 Class II Aldolase and Adducin N-terminal domain CJF59_10200 SM00487 DEAD-like helicases superfamily CJF59_10200 SM00490 helicase superfamily c-terminal domain CJF59_10200 SM00847 Helicase associated domain (HA2) Add an annotation CJF59_10205 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CJF59_10295 SM00345 helix_turn_helix gluconate operon transcriptional repressor CJF59_10295 SM00895 CJF59_10295 CJF59_10330 SM00382 ATPases associated with a variety of cellular activities CJF59_10345 SM00382 ATPases associated with a variety of cellular activities CJF59_10370 SM00072 Guanylate kinase homologues. CJF59_10385 SM00967 RNA 2'-O ribose methyltransferase substrate binding CJF59_10390 SM00474 3'-5' exonuclease CJF59_10395 SM00116 Domain in cystathionine beta-synthase and other proteins. CJF59_10410 SM00382 ATPases associated with a variety of cellular activities CJF59_10530 SM00935 Outer membrane protein (OmpH-like) CJF59_10540 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CJF59_10575 SM00358 Double-stranded RNA binding motif CJF59_10575 SM00535 Ribonuclease III family CJF59_10590 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CJF59_10590 SM00954 Region found in RelA / SpoT proteins CJF59_10595 SM01409 CJF59_10595 CJF59_10610 SM00947 Carbonic anhydrase CJF59_10620 SM00487 DEAD-like helicases superfamily CJF59_10620 SM00490 helicase superfamily c-terminal domain CJF59_10635 SM00838 Elongation factor G C-terminus CJF59_10650 SM00564 beta-propeller repeat CJF59_10660 SM01230 CJF59_10660 CJF59_10665 SM00938 Nitrogen regulatory protein P-II CJF59_10690 SM01329 CJF59_10690 CJF59_10815 SM00833 Cobalamin synthesis protein cobW C-terminal domain CJF59_10820 SM00320 WD40 repeats CJF59_10845 SM00861 Transketolase, pyrimidine binding domain CJF59_10930 SM00822 CJF59_10930 CJF59_11090 SM00450 Rhodanese Homology Domain CJF59_11120 SM00729 Elongator protein 3, MiaB family, Radical SAM CJF59_11130 SM00857 Resolvase, N terminal domain CJF59_11160 SM00530 Helix-turn-helix XRE-family like proteins CJF59_11235 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. CJF59_11340 SM00530 Helix-turn-helix XRE-family like proteins CJF59_11410 SM00507 HNH nucleases CJF59_11605 SM00464 Found in ATP-dependent protease La (LON) CJF59_11630 SM00382 ATPases associated with a variety of cellular activities CJF59_11635 SM00932 Scaffold protein Nfu/NifU N terminal CJF59_11655 SM01209 CJF59_11655 CJF59_11655 SM01210 CJF59_11655 CJF59_11685 SM00829 Enoylreductase CJF59_11700 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CJF59_11700 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CJF59_11705 SM00859 Semialdehyde dehydrogenase, NAD binding domain CJF59_11745 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CJF59_11750 SM00861 Transketolase, pyrimidine binding domain CJF59_11775 SM00382 ATPases associated with a variety of cellular activities CJF59_11820 SM00382 ATPases associated with a variety of cellular activities CJF59_11830 SM00493 CJF59_11830 CJF59_11840 SM00905 Dihydroneopterin aldolase CJF59_11860 SM00316 Ribosomal protein S1-like RNA-binding domain CJF59_11895 SM00937 CJF59_11895 CJF59_11950 SM00917 LeuA allosteric (dimerisation) domain CJF59_11970 SM00387 Histidine kinase-like ATPases CJF59_11970 SM00388 His Kinase A (phosphoacceptor) domain CJF59_11970 SM00448 cheY-homologous receiver domain CJF59_11990 SM00986 Uracil DNA glycosylase superfamily CJF59_11990 SM00987 UreE urease accessory protein, C-terminal domain CJF59_12000 SM00564 beta-propeller repeat CJF59_12045 SM00490 helicase superfamily c-terminal domain CJF59_12055 SM00347 helix_turn_helix multiple antibiotic resistance protein CJF59_12105 SM00490 helicase superfamily c-terminal domain CJF59_12125 SM00919 Malic enzyme, NAD binding domain CJF59_12125 SM01274 CJF59_12125 CJF59_12130 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CJF59_12130 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CJF59_12170 SM00382 ATPases associated with a variety of cellular activities CJF59_12185 SM00341 Helicase and RNase D C-terminal CJF59_12185 SM00474 3'-5' exonuclease CJF59_12210 SM00382 ATPases associated with a variety of cellular activities CJF59_12240 SM00342 helix_turn_helix, arabinose operon control protein CJF59_12280 SM00357 Cold shock protein domain CJF59_12325 SM00421 helix_turn_helix, Lux Regulon CJF59_12325 SM00448 cheY-homologous receiver domain CJF59_12330 SM00387 Histidine kinase-like ATPases CJF59_12330 SM00388 His Kinase A (phosphoacceptor) domain CJF59_12330 SM00448 cheY-homologous receiver domain CJF59_12350 SM00382 ATPases associated with a variety of cellular activities CJF59_12355 SM00382 ATPases associated with a variety of cellular activities CJF59_12380 SM00857 Resolvase, N terminal domain CJF59_12450 SM00857 Resolvase, N terminal domain CJF59_12475 SM00857 Resolvase, N terminal domain CJF59_12495 SM00857 Resolvase, N terminal domain CJF59_12565 SM00347 helix_turn_helix multiple antibiotic resistance protein CJF59_12635 SM00028 Tetratricopeptide repeats CJF59_12665 SM00867 YceI-like domain CJF59_12685 SM00382 ATPases associated with a variety of cellular activities CJF59_12705 SM00271 DnaJ molecular chaperone homology domain CJF59_12825 SM00487 DEAD-like helicases superfamily CJF59_12825 SM00490 helicase superfamily c-terminal domain CJF59_12925 SM01133 CJF59_12925 CJF59_12980 SM00382 ATPases associated with a variety of cellular activities CJF59_12980 SM01086 C-terminal, D2-small domain, of ClpB protein CJF59_13010 SM00387 Histidine kinase-like ATPases CJF59_13010 SM00388 His Kinase A (phosphoacceptor) domain CJF59_13015 SM00448 cheY-homologous receiver domain CJF59_13015 SM00862 Transcriptional regulatory protein, C terminal CJF59_13030 SM00271 DnaJ molecular chaperone homology domain CJF59_13050 SM00798 AICARFT/IMPCHase bienzyme CJF59_13050 SM00851 MGS-like domain CJF59_13085 SM00530 Helix-turn-helix XRE-family like proteins CJF59_13110 SM00357 Cold shock protein domain CJF59_13110 SM00382 ATPases associated with a variety of cellular activities CJF59_13110 SM00959 Rho termination factor, N-terminal domain CJF59_13140 SM00382 ATPases associated with a variety of cellular activities CJF59_13150 SM00788 Adenylosuccinate synthetase CJF59_13155 SM00448 cheY-homologous receiver domain CJF59_13155 SM00862 Transcriptional regulatory protein, C terminal CJF59_13160 SM00387 Histidine kinase-like ATPases CJF59_13160 SM00388 His Kinase A (phosphoacceptor) domain CJF59_13190 SM01091 Transporter associated domain CJF59_13195 SM00829 Enoylreductase CJF59_13200 SM00382 ATPases associated with a variety of cellular activities CJF59_13220 SM00822 CJF59_13220 CJF59_13225 SM00859 Semialdehyde dehydrogenase, NAD binding domain CJF59_13240 SM00387 Histidine kinase-like ATPases CJF59_13300 SM00479 CJF59_13300 CJF59_13345 SM00530 Helix-turn-helix XRE-family like proteins CJF59_13395 SM00990 CJF59_13395 CJF59_13675 SM00477 DNA/RNA non-specific endonuclease CJF59_13675 SM00892 DNA/RNA non-specific endonuclease CJF59_13690 SM00530 Helix-turn-helix XRE-family like proteins CJF59_13790 SM00450 Rhodanese Homology Domain CJF59_13865 SM00729 Elongator protein 3, MiaB family, Radical SAM CJF59_13900 SM01091 Transporter associated domain CJF59_13910 SM00986 Uracil DNA glycosylase superfamily CJF59_13910 SM00987 UreE urease accessory protein, C-terminal domain CJF59_13915 SM00028 Tetratricopeptide repeats CJF59_13950 SM00382 ATPases associated with a variety of cellular activities CJF59_13960 SM01400 CJF59_13960 CJF59_13965 SM00855 Phosphoglycerate mutase family CJF59_14000 SM00822 CJF59_14000 CJF59_14030 SM00382 ATPases associated with a variety of cellular activities CJF59_14055 SM00421 helix_turn_helix, Lux Regulon CJF59_14195 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CJF59_14245 SM00857 Resolvase, N terminal domain CJF59_14330 SM00530 Helix-turn-helix XRE-family like proteins CJF59_14580 SM00833 Cobalamin synthesis protein cobW C-terminal domain CJF59_14740 SM00342 helix_turn_helix, arabinose operon control protein CJF59_14745 SM00822 CJF59_14745 CJF59_14785 SM00530 Helix-turn-helix XRE-family like proteins CJF59_14805 SM00829 Enoylreductase CJF59_14850 SM00487 DEAD-like helicases superfamily CJF59_14855 SM00470 ParB-like nuclease domain CJF59_14860 SM00530 Helix-turn-helix XRE-family like proteins CJF59_14925 SM00477 DNA/RNA non-specific endonuclease CJF59_14925 SM00892 DNA/RNA non-specific endonuclease CJF59_14945 SM00966 SpoVT / AbrB like domain CJF59_14955 SM00487 DEAD-like helicases superfamily CJF59_15010 SM00530 Helix-turn-helix XRE-family like proteins CJF59_15110 SM00966 SpoVT / AbrB like domain CJF59_15115 SM00670 Large family of predicted nucleotide-binding domains CJF59_15165 SM01040 BRO family, N-terminal domain CJF59_15170 SM00411 bacterial (prokaryotic) histone like domain CJF59_15175 SM00773 Proposed nucleic acid binding domain CJF59_15180 SM00857 Resolvase, N terminal domain CJF59_15295 SM00857 Resolvase, N terminal domain CJF59_15325 SM00530 Helix-turn-helix XRE-family like proteins CJF59_15345 SM00487 DEAD-like helicases superfamily CJF59_15355 SM00966 SpoVT / AbrB like domain