locus-tag class description FAI40_00005 PF00308 Bacterial dnaA protein FAI40_00005 PF11638 DnaA N-terminal domain FAI40_00005 PF08299 Bacterial dnaA protein helix-turn-helix FAI40_00010 PF02767 DNA polymerase III beta subunit, central domain FAI40_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain FAI40_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain FAI40_00015 PF02463 RecF/RecN/SMC N terminal domain FAI40_00020 PF00986 DNA gyrase B subunit, carboxyl terminus FAI40_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FAI40_00020 PF01751 Toprim domain FAI40_00020 PF00204 DNA gyrase B FAI40_00025 PF00132 Bacterial transferase hexapeptide (six repeats) FAI40_00025 PF12804 MobA-like NTP transferase domain FAI40_00030 PF01380 SIS domain FAI40_00035 PF00999 Sodium/hydrogen exchanger family FAI40_00045 PF01168 Alanine racemase, N-terminal domain FAI40_00045 PF00842 Alanine racemase, C-terminal domain FAI40_00050 PF00501 AMP-binding enzyme FAI40_00055 PF00550 Phosphopantetheine attachment site FAI40_00060 PF00155 Aminotransferase class I and II FAI40_00090 PF02618 YceG-like family FAI40_00095 PF00109 Beta-ketoacyl synthase, N-terminal domain FAI40_00095 PF02801 Beta-ketoacyl synthase, C-terminal domain FAI40_00100 PF00550 Phosphopantetheine attachment site FAI40_00110 PF00698 Acyl transferase domain FAI40_00115 PF01431 Peptidase family M13 FAI40_00115 PF05649 Peptidase family M13 FAI40_00120 PF04055 Radical SAM superfamily FAI40_00120 PF06968 Biotin and Thiamin Synthesis associated domain FAI40_00140 PF02405 Permease MlaE FAI40_00160 PF02559 CarD-like/TRCF domain FAI40_00175 PF00919 Uncharacterized protein family UPF0004 FAI40_00175 PF04055 Radical SAM superfamily FAI40_00175 PF01938 TRAM domain FAI40_00180 PF02562 PhoH-like protein FAI40_00185 PF02130 Uncharacterized protein family UPF0054 FAI40_00190 PF03471 Transporter associated domain FAI40_00190 PF00571 CBS domain FAI40_00195 PF13462 Thioredoxin FAI40_00200 PF00156 Phosphoribosyl transferase domain FAI40_00205 PF01177 Asp/Glu/Hydantoin racemase FAI40_00210 PF00348 Polyprenyl synthetase FAI40_00215 PF00268 Ribonucleotide reductase, small chain FAI40_00220 PF02867 Ribonucleotide reductase, barrel domain FAI40_00220 PF03477 ATP cone domain FAI40_00220 PF00317 Ribonucleotide reductase, all-alpha domain FAI40_00240 PF02606 Tetraacyldisaccharide-1-P 4'-kinase FAI40_00255 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FAI40_00260 PF03548 Outer membrane lipoprotein carrier protein LolA FAI40_00265 PF04107 Glutamate-cysteine ligase family 2(GCS2) FAI40_00270 PF04452 RNA methyltransferase FAI40_00275 PF01040 UbiA prenyltransferase family FAI40_00280 PF01926 50S ribosome-binding GTPase FAI40_00280 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FAI40_00285 PF13360 PQQ-like domain FAI40_00295 PF01979 Amidohydrolase family FAI40_00300 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FAI40_00305 PF00929 Exonuclease FAI40_00310 PF01121 Dephospho-CoA kinase FAI40_00320 PF12706 Beta-lactamase superfamily domain FAI40_00325 PF01026 TatD related DNase FAI40_00330 PF08264 Anticodon-binding domain of tRNA FAI40_00330 PF09334 tRNA synthetases class I (M) FAI40_00335 PF12169 DNA polymerase III subunits gamma and tau domain III FAI40_00340 PF02223 Thymidylate kinase FAI40_00345 PF07943 Penicillin-binding protein 5, C-terminal domain FAI40_00345 PF00768 D-alanyl-D-alanine carboxypeptidase FAI40_00365 PF02673 Bacitracin resistance protein BacA FAI40_00380 PF13847 Methyltransferase domain FAI40_00380 PF17827 PrmC N-terminal domain FAI40_00385 PF00472 RF-1 domain FAI40_00385 PF03462 PCRF domain FAI40_00390 PF03129 Anticodon binding domain FAI40_00390 PF13393 Histidyl-tRNA synthetase FAI40_00395 PF04551 GcpE protein FAI40_00405 PF03060 Nitronate monooxygenase FAI40_00410 PF00696 Amino acid kinase family FAI40_00410 PF01842 ACT domain FAI40_00410 PF13840 ACT domain FAI40_00415 PF08241 Methyltransferase domain FAI40_00425 PF00462 Glutaredoxin FAI40_00435 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FAI40_00435 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FAI40_00435 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FAI40_00435 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FAI40_00440 PF00483 Nucleotidyl transferase FAI40_00450 PF03099 Biotin/lipoate A/B protein ligase family FAI40_00475 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FAI40_00475 PF14579 Helix-hairpin-helix motif FAI40_00475 PF02811 PHP domain FAI40_00475 PF07733 Bacterial DNA polymerase III alpha NTPase domain FAI40_00480 PF00005 ABC transporter FAI40_00485 PF02687 FtsX-like permease family FAI40_00485 PF12704 MacB-like periplasmic core domain FAI40_00490 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FAI40_00490 PF03129 Anticodon binding domain FAI40_00495 PF17770 Ribonuclease J C-terminal domain FAI40_00495 PF12706 Beta-lactamase superfamily domain FAI40_00495 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain FAI40_00500 PF03309 Type III pantothenate kinase FAI40_00515 PF00216 Bacterial DNA-binding protein FAI40_00520 PF00004 ATPase family associated with various cellular activities (AAA) FAI40_00520 PF05362 Lon protease (S16) C-terminal proteolytic domain FAI40_00520 PF02190 ATP-dependent protease La (LON) substrate-binding domain FAI40_00525 PF06689 ClpX C4-type zinc finger FAI40_00525 PF10431 C-terminal, D2-small domain, of ClpB protein FAI40_00525 PF07724 AAA domain (Cdc48 subfamily) FAI40_00530 PF00574 Clp protease FAI40_00535 PF05698 Bacterial trigger factor protein (TF) C-terminus FAI40_00535 PF05697 Bacterial trigger factor protein (TF) FAI40_00535 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FAI40_00550 PF00271 Helicase conserved C-terminal domain FAI40_00550 PF00270 DEAD/DEAH box helicase FAI40_00555 PF01521 Iron-sulphur cluster biosynthesis FAI40_00560 PF01883 Iron-sulfur cluster assembly protein FAI40_00565 PF00266 Aminotransferase class-V FAI40_00570 PF01458 Uncharacterized protein family (UPF0051) FAI40_00575 PF00005 ABC transporter FAI40_00580 PF01458 Uncharacterized protein family (UPF0051) FAI40_00590 PF04286 Protein of unknown function (DUF445) FAI40_00590 PF04286 Protein of unknown function (DUF445) FAI40_00600 PF00857 Isochorismatase family FAI40_00605 PF00155 Aminotransferase class I and II FAI40_00615 PF00829 Ribosomal prokaryotic L21 protein FAI40_00620 PF01016 Ribosomal L27 protein FAI40_00625 PF01926 50S ribosome-binding GTPase FAI40_00625 PF01018 GTP1/OBG FAI40_00630 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) FAI40_00635 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain FAI40_00635 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain FAI40_00645 PF02381 MraZ protein, putative antitoxin-like FAI40_00650 PF01795 MraW methylase family FAI40_00660 PF03717 Penicillin-binding Protein dimerisation domain FAI40_00660 PF00905 Penicillin binding protein transpeptidase domain FAI40_00665 PF02875 Mur ligase family, glutamate ligase domain FAI40_00665 PF01225 Mur ligase family, catalytic domain FAI40_00665 PF08245 Mur ligase middle domain FAI40_00670 PF08245 Mur ligase middle domain FAI40_00670 PF01225 Mur ligase family, catalytic domain FAI40_00670 PF02875 Mur ligase family, glutamate ligase domain FAI40_00675 PF00953 Glycosyl transferase family 4 FAI40_00680 PF02875 Mur ligase family, glutamate ligase domain FAI40_00680 PF08245 Mur ligase middle domain FAI40_00685 PF01098 Cell cycle protein FAI40_00690 PF03033 Glycosyltransferase family 28 N-terminal domain FAI40_00690 PF04101 Glycosyltransferase family 28 C-terminal domain FAI40_00695 PF08245 Mur ligase middle domain FAI40_00695 PF02875 Mur ligase family, glutamate ligase domain FAI40_00695 PF01225 Mur ligase family, catalytic domain FAI40_00700 PF01565 FAD binding domain FAI40_00700 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FAI40_00705 PF01820 D-ala D-ala ligase N-terminus FAI40_00705 PF07478 D-ala D-ala ligase C-terminus FAI40_00710 PF08478 POTRA domain, FtsQ-type FAI40_00710 PF03799 Cell division protein FtsQ FAI40_00715 PF02491 SHS2 domain inserted in FTSA FAI40_00720 PF00091 Tubulin/FtsZ family, GTPase domain FAI40_00720 PF12327 FtsZ family, C-terminal domain FAI40_00730 PF12327 FtsZ family, C-terminal domain FAI40_00730 PF00091 Tubulin/FtsZ family, GTPase domain FAI40_00735 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase FAI40_00740 PF13525 Outer membrane lipoprotein FAI40_00745 PF02463 RecF/RecN/SMC N terminal domain FAI40_00750 PF03119 NAD-dependent DNA ligase C4 zinc finger domain FAI40_00750 PF03120 NAD-dependent DNA ligase OB-fold domain FAI40_00750 PF12826 Helix-hairpin-helix motif FAI40_00750 PF01653 NAD-dependent DNA ligase adenylation domain FAI40_00750 PF00533 BRCA1 C Terminus (BRCT) domain FAI40_00755 PF03471 Transporter associated domain FAI40_00755 PF01595 Cyclin M transmembrane N-terminal domain FAI40_00755 PF00571 CBS domain FAI40_00770 PF08274 PhnA Zinc-Ribbon FAI40_00770 PF03831 PhnA domain FAI40_00800 PF00156 Phosphoribosyl transferase domain FAI40_00835 PF01625 Peptide methionine sulfoxide reductase FAI40_00840 PF00171 Aldehyde dehydrogenase family FAI40_00845 PF00696 Amino acid kinase family FAI40_00845 PF01472 PUA domain FAI40_00850 PF03741 Integral membrane protein TerC family FAI40_00855 PF00300 Histidine phosphatase superfamily (branch 1) FAI40_00865 PF10459 Peptidase S46 FAI40_00890 PF00270 DEAD/DEAH box helicase FAI40_00890 PF00271 Helicase conserved C-terminal domain FAI40_00895 PF00464 Serine hydroxymethyltransferase FAI40_00905 PF00490 Delta-aminolevulinic acid dehydratase FAI40_00910 PF02021 Uncharacterised protein family UPF0102 FAI40_00920 PF00462 Glutaredoxin FAI40_00935 PF01259 SAICAR synthetase FAI40_00940 PF10397 Adenylosuccinate lyase C-terminus FAI40_00940 PF00206 Lyase FAI40_00945 PF03741 Integral membrane protein TerC family FAI40_00955 PF04055 Radical SAM superfamily FAI40_00960 PF07992 Pyridine nucleotide-disulphide oxidoreductase FAI40_00960 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FAI40_00965 PF02817 e3 binding domain FAI40_00965 PF00364 Biotin-requiring enzyme FAI40_00965 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FAI40_00975 PF00676 Dehydrogenase E1 component FAI40_00985 PF00121 Triosephosphate isomerase FAI40_00995 PF06418 CTP synthase N-terminus FAI40_00995 PF00117 Glutamine amidotransferase class-I FAI40_01000 PF00793 DAHP synthetase I family FAI40_01005 PF00113 Enolase, C-terminal TIM barrel domain FAI40_01005 PF03952 Enolase, N-terminal domain FAI40_01015 PF00471 Ribosomal protein L33 FAI40_01025 PF01066 CDP-alcohol phosphatidyltransferase FAI40_01030 PF02151 UvrB/uvrC motif FAI40_01030 PF08459 UvrC Helix-hairpin-helix N-terminal FAI40_01030 PF12826 Helix-hairpin-helix motif FAI40_01030 PF01541 GIY-YIG catalytic domain FAI40_01040 PF01189 16S rRNA methyltransferase RsmB/F FAI40_01040 PF01029 NusB family FAI40_01045 PF00478 IMP dehydrogenase / GMP reductase domain FAI40_01045 PF00571 CBS domain FAI40_01060 PF02685 Glucokinase FAI40_01075 PF00586 AIR synthase related protein, N-terminal domain FAI40_01075 PF02769 AIR synthase related protein, C-terminal domain FAI40_01080 PF01029 NusB family FAI40_01090 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FAI40_01090 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FAI40_01095 PF02355 Protein export membrane protein FAI40_01095 PF07549 SecD/SecF GG Motif FAI40_01100 PF07549 SecD/SecF GG Motif FAI40_01100 PF02355 Protein export membrane protein FAI40_01110 PF01197 Ribosomal protein L31 FAI40_01120 PF00580 UvrD/REP helicase N-terminal domain FAI40_01120 PF13361 UvrD-like helicase C-terminal domain FAI40_01135 PF01321 Creatinase/Prolidase N-terminal domain FAI40_01135 PF00557 Metallopeptidase family M24 FAI40_01155 PF00899 ThiF family FAI40_01165 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ FAI40_01170 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FAI40_01180 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FAI40_01195 PF08946 Osmosensory transporter coiled coil FAI40_01195 PF00083 Sugar (and other) transporter FAI40_01210 PF00106 short chain dehydrogenase FAI40_01245 PF00593 TonB dependent receptor FAI40_01245 PF07715 TonB-dependent Receptor Plug Domain FAI40_01250 PF13360 PQQ-like domain FAI40_01260 PF00121 Triosephosphate isomerase FAI40_01265 PF02734 DAK2 domain FAI40_01265 PF02733 Dak1 domain FAI40_01270 PF00005 ABC transporter FAI40_01270 PF12848 ABC transporter FAI40_01280 PF00270 DEAD/DEAH box helicase FAI40_01280 PF00271 Helicase conserved C-terminal domain FAI40_01290 PF02934 GatB/GatE catalytic domain FAI40_01290 PF02637 GatB domain FAI40_01295 PF01425 Amidase FAI40_01300 PF02686 Glu-tRNAGln amidotransferase C subunit FAI40_01305 PF03652 Holliday junction resolvase FAI40_01310 PF01545 Cation efflux family FAI40_01310 PF16916 Dimerisation domain of Zinc Transporter FAI40_01315 PF01545 Cation efflux family FAI40_01315 PF16916 Dimerisation domain of Zinc Transporter FAI40_01320 PF00248 Aldo/keto reductase family FAI40_01330 PF02321 Outer membrane efflux protein FAI40_01335 PF08361 MAATS-type transcriptional repressor, C-terminal region FAI40_01335 PF00440 Bacterial regulatory proteins, tetR family FAI40_01340 PF07690 Major Facilitator Superfamily FAI40_01345 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FAI40_01345 PF00529 HlyD membrane-fusion protein of T1SS FAI40_01350 PF01029 NusB family FAI40_01350 PF01189 16S rRNA methyltransferase RsmB/F FAI40_01355 PF01168 Alanine racemase, N-terminal domain FAI40_01360 PF06969 HemN C-terminal domain FAI40_01360 PF04055 Radical SAM superfamily FAI40_01370 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain FAI40_01370 PF03725 3' exoribonuclease family, domain 2 FAI40_01370 PF01138 3' exoribonuclease family, domain 1 FAI40_01370 PF00013 KH domain FAI40_01370 PF00575 S1 RNA binding domain FAI40_01375 PF00312 Ribosomal protein S15 FAI40_01380 PF01509 TruB family pseudouridylate synthase (N terminal domain) FAI40_01380 PF16198 tRNA pseudouridylate synthase B C-terminal domain FAI40_01385 PF02033 Ribosome-binding factor A FAI40_01390 PF00009 Elongation factor Tu GTP binding domain FAI40_01390 PF04760 Translation initiation factor IF-2, N-terminal region FAI40_01390 PF08364 Bacterial translation initiation factor IF-2 associated region FAI40_01390 PF00009 Elongation factor Tu GTP binding domain FAI40_01390 PF04760 Translation initiation factor IF-2, N-terminal region FAI40_01390 PF11987 Translation-initiation factor 2 FAI40_01390 PF11987 Translation-initiation factor 2 FAI40_01390 PF08364 Bacterial translation initiation factor IF-2 associated region FAI40_01400 PF13184 NusA-like KH domain FAI40_01400 PF08529 NusA N-terminal domain FAI40_01400 PF00575 S1 RNA binding domain FAI40_01405 PF17384 RimP C-terminal SH3 domain FAI40_01405 PF02576 RimP N-terminal domain FAI40_01420 PF00528 Binding-protein-dependent transport system inner membrane component FAI40_01425 PF00005 ABC transporter FAI40_01430 PF00005 ABC transporter FAI40_01435 PF03379 CcmB protein FAI40_01440 PF00289 Biotin carboxylase, N-terminal domain FAI40_01440 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FAI40_01440 PF02785 Biotin carboxylase C-terminal domain FAI40_01445 PF00364 Biotin-requiring enzyme FAI40_01455 PF00633 Helix-hairpin-helix motif FAI40_01455 PF10576 Iron-sulfur binding domain of endonuclease III FAI40_01455 PF00730 HhH-GPD superfamily base excision DNA repair protein FAI40_01465 PF00749 tRNA synthetases class I (E and Q), catalytic domain FAI40_01470 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FAI40_01470 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FAI40_01475 PF02660 Glycerol-3-phosphate acyltransferase FAI40_01480 PF17782 DprA winged helix domain FAI40_01480 PF02481 DNA recombination-mediator protein A FAI40_01485 PF13368 Topoisomerase C-terminal repeat FAI40_01485 PF01131 DNA topoisomerase FAI40_01485 PF01751 Toprim domain FAI40_01485 PF01396 Topoisomerase DNA binding C4 zinc finger FAI40_01490 PF00691 OmpA family FAI40_01505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FAI40_01505 PF00204 DNA gyrase B FAI40_01505 PF01751 Toprim domain FAI40_01505 PF00986 DNA gyrase B subunit, carboxyl terminus FAI40_01520 PF01936 NYN domain FAI40_01595 PF07409 Phage protein GP46 FAI40_01830 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FAI40_01835 PF01467 Cytidylyltransferase-like FAI40_01840 PF00521 DNA gyrase/topoisomerase IV, subunit A FAI40_01840 PF03989 DNA gyrase C-terminal domain, beta-propeller FAI40_01850 PF02646 RmuC family FAI40_01860 PF00884 Sulfatase FAI40_01865 PF00884 Sulfatase FAI40_01875 PF01040 UbiA prenyltransferase family FAI40_01885 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FAI40_01885 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FAI40_01915 PF02798 Glutathione S-transferase, N-terminal domain FAI40_01915 PF14497 Glutathione S-transferase, C-terminal domain FAI40_01920 PF13193 AMP-binding enzyme C-terminal domain FAI40_01920 PF00501 AMP-binding enzyme FAI40_01920 PF16177 Acetyl-coenzyme A synthetase N-terminus FAI40_01925 PF06100 MCRA family FAI40_01930 PF06100 MCRA family FAI40_01950 PF13277 YmdB-like protein FAI40_01955 PF01812 5-formyltetrahydrofolate cyclo-ligase family FAI40_01975 PF00593 TonB dependent receptor FAI40_01985 PF00152 tRNA synthetases class II (D, K and N) FAI40_01990 PF04055 Radical SAM superfamily FAI40_01990 PF12544 Lysine-2,3-aminomutase FAI40_01995 PF08207 Elongation factor P (EF-P) KOW-like domain FAI40_01995 PF01132 Elongation factor P (EF-P) OB domain FAI40_01995 PF09285 Elongation factor P, C-terminal FAI40_02000 PF00459 Inositol monophosphatase family FAI40_02010 PF00679 Elongation factor G C-terminus FAI40_02010 PF00009 Elongation factor Tu GTP binding domain FAI40_02010 PF03144 Elongation factor Tu domain 2 FAI40_02010 PF06421 GTP-binding protein LepA C-terminus FAI40_02020 PF00860 Permease family FAI40_02030 PF02609 Exonuclease VII small subunit FAI40_02035 PF00348 Polyprenyl synthetase FAI40_02040 PF02779 Transketolase, pyrimidine binding domain FAI40_02040 PF02780 Transketolase, C-terminal domain FAI40_02040 PF13292 1-deoxy-D-xylulose-5-phosphate synthase FAI40_02045 PF01728 FtsJ-like methyltransferase FAI40_02045 PF01479 S4 domain FAI40_02050 PF04055 Radical SAM superfamily FAI40_02060 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FAI40_02060 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FAI40_02065 PF00579 tRNA synthetases class I (W and Y) FAI40_02070 PF02040 Arsenical pump membrane protein FAI40_02080 PF02684 Lipid-A-disaccharide synthetase FAI40_02085 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain FAI40_02085 PF01588 Putative tRNA binding domain FAI40_02085 PF03147 Ferredoxin-fold anticodon binding domain FAI40_02085 PF03483 B3/4 domain FAI40_02085 PF03484 tRNA synthetase B5 domain FAI40_02090 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain FAI40_02090 PF01409 tRNA synthetases class II core domain (F) FAI40_02095 PF00453 Ribosomal protein L20 FAI40_02100 PF01632 Ribosomal protein L35 FAI40_02105 PF02657 Fe-S metabolism associated domain FAI40_02130 PF02666 Phosphatidylserine decarboxylase FAI40_02135 PF01066 CDP-alcohol phosphatidyltransferase FAI40_02150 PF00883 Cytosol aminopeptidase family, catalytic domain FAI40_02150 PF02789 Cytosol aminopeptidase family, N-terminal domain FAI40_02155 PF00459 Inositol monophosphatase family FAI40_02160 PF01300 Telomere recombination FAI40_02160 PF03481 Putative GTP-binding controlling metal-binding FAI40_02165 PF03739 Lipopolysaccharide export system permease LptF/LptG FAI40_02185 PF00398 Ribosomal RNA adenine dimethylase FAI40_02195 PF01281 Ribosomal protein L9, N-terminal domain FAI40_02195 PF03948 Ribosomal protein L9, C-terminal domain FAI40_02200 PF01084 Ribosomal protein S18 FAI40_02205 PF01250 Ribosomal protein S6 FAI40_02215 PF04545 Sigma-70, region 4 FAI40_02215 PF04546 Sigma-70, non-essential region FAI40_02215 PF03979 Sigma-70 factor, region 1.1 FAI40_02215 PF00140 Sigma-70 factor, region 1.2 FAI40_02215 PF04542 Sigma-70 region 2 FAI40_02215 PF04539 Sigma-70 region 3 FAI40_02220 PF08278 DNA primase DnaG DnaB-binding FAI40_02220 PF08275 DNA primase catalytic core, N-terminal domain FAI40_02220 PF10410 DnaB-helicase binding domain of primase FAI40_02220 PF01807 CHC2 zinc finger FAI40_02230 PF00117 Glutamine amidotransferase class-I FAI40_02230 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain FAI40_02235 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FAI40_02235 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FAI40_02235 PF02142 MGS-like domain FAI40_02240 PF03449 Transcription elongation factor, N-terminal FAI40_02240 PF01272 Transcription elongation factor, GreA/GreB, C-term FAI40_02245 PF01676 Metalloenzyme superfamily FAI40_02245 PF06415 BPG-independent PGAM N-terminus (iPGM_N) FAI40_02265 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FAI40_02280 PF03572 Peptidase family S41 FAI40_02280 PF13180 PDZ domain FAI40_02285 PF00293 NUDIX domain FAI40_02290 PF00005 ABC transporter FAI40_02290 PF00664 ABC transporter transmembrane region FAI40_02295 PF12627 Probable RNA and SrmB- binding site of polymerase A FAI40_02295 PF01743 Poly A polymerase head domain FAI40_02295 PF13735 tRNA nucleotidyltransferase domain 2 putative FAI40_02310 PF01555 DNA methylase FAI40_02310 PF18755 Restriction Enzyme Adenine Methylase Associated FAI40_02315 PF01351 Ribonuclease HII FAI40_02340 PF01196 Ribosomal protein L17 FAI40_02345 PF01000 RNA polymerase Rpb3/RpoA insert domain FAI40_02345 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain FAI40_02345 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain FAI40_02350 PF00411 Ribosomal protein S11 FAI40_02355 PF00416 Ribosomal protein S13/S18 FAI40_02365 PF00344 SecY translocase FAI40_02370 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A FAI40_02375 PF00327 Ribosomal protein L30p/L7e FAI40_02380 PF00333 Ribosomal protein S5, N-terminal domain FAI40_02380 PF03719 Ribosomal protein S5, C-terminal domain FAI40_02385 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast FAI40_02390 PF00347 Ribosomal protein L6 FAI40_02395 PF00410 Ribosomal protein S8 FAI40_02400 PF00253 Ribosomal protein S14p/S29e FAI40_02405 PF00673 ribosomal L5P family C-terminus FAI40_02405 PF00281 Ribosomal protein L5 FAI40_02410 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 FAI40_02415 PF00238 Ribosomal protein L14p/L23e FAI40_02420 PF00366 Ribosomal protein S17 FAI40_02425 PF00831 Ribosomal L29 protein FAI40_02430 PF00252 Ribosomal protein L16p/L10e FAI40_02435 PF07650 KH domain FAI40_02435 PF00189 Ribosomal protein S3, C-terminal domain FAI40_02440 PF00237 Ribosomal protein L22p/L17e FAI40_02445 PF00203 Ribosomal protein S19 FAI40_02450 PF00181 Ribosomal Proteins L2, RNA binding domain FAI40_02450 PF03947 Ribosomal Proteins L2, C-terminal domain FAI40_02455 PF00276 Ribosomal protein L23 FAI40_02460 PF00573 Ribosomal protein L4/L1 family FAI40_02465 PF00297 Ribosomal protein L3 FAI40_02470 PF00338 Ribosomal protein S10p/S20e FAI40_02475 PF03143 Elongation factor Tu C-terminal domain FAI40_02475 PF03144 Elongation factor Tu domain 2 FAI40_02475 PF00009 Elongation factor Tu GTP binding domain FAI40_02480 PF00177 Ribosomal protein S7p/S5e FAI40_02485 PF00164 Ribosomal protein S12/S23 FAI40_02490 PF00623 RNA polymerase Rpb1, domain 2 FAI40_02490 PF04983 RNA polymerase Rpb1, domain 3 FAI40_02490 PF04997 RNA polymerase Rpb1, domain 1 FAI40_02490 PF05000 RNA polymerase Rpb1, domain 4 FAI40_02490 PF04998 RNA polymerase Rpb1, domain 5 FAI40_02495 PF00562 RNA polymerase Rpb2, domain 6 FAI40_02495 PF04560 RNA polymerase Rpb2, domain 7 FAI40_02495 PF04563 RNA polymerase beta subunit FAI40_02495 PF04561 RNA polymerase Rpb2, domain 2 FAI40_02495 PF10385 RNA polymerase beta subunit external 1 domain FAI40_02495 PF04565 RNA polymerase Rpb2, domain 3 FAI40_02500 PF00542 Ribosomal protein L7/L12 C-terminal domain FAI40_02500 PF16320 Ribosomal protein L7/L12 dimerisation domain FAI40_02505 PF00466 Ribosomal protein L10 FAI40_02510 PF00687 Ribosomal protein L1p/L10e family FAI40_02515 PF00298 Ribosomal protein L11, RNA binding domain FAI40_02515 PF03946 Ribosomal protein L11, N-terminal domain FAI40_02520 PF03775 Septum formation inhibitor MinC, C-terminal domain FAI40_02525 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FAI40_02530 PF03776 Septum formation topological specificity factor MinE FAI40_02545 PF00133 tRNA synthetases class I (I, L, M and V) FAI40_02545 PF08264 Anticodon-binding domain of tRNA FAI40_02545 PF13603 Leucyl-tRNA synthetase, Domain 2 FAI40_02550 PF12100 Domain of unknown function (DUF3576) FAI40_02575 PF13185 GAF domain FAI40_02590 PF01810 LysE type translocator FAI40_02605 PF01180 Dihydroorotate dehydrogenase FAI40_02610 PF01232 Mannitol dehydrogenase Rossmann domain FAI40_02610 PF08125 Mannitol dehydrogenase C-terminal domain FAI40_02625 PF01636 Phosphotransferase enzyme family FAI40_02635 PF00270 DEAD/DEAH box helicase FAI40_02635 PF00271 Helicase conserved C-terminal domain FAI40_02645 PF10544 T5orf172 domain FAI40_02680 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FAI40_02680 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FAI40_02685 PF13180 PDZ domain FAI40_02690 PF14437 MafB19-like deaminase FAI40_02695 PF01479 S4 domain FAI40_02695 PF00849 RNA pseudouridylate synthase FAI40_02705 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FAI40_02705 PF01580 FtsK/SpoIIIE family FAI40_02705 PF09397 Ftsk gamma domain FAI40_02705 PF17854 FtsK alpha domain FAI40_02710 PF01479 S4 domain FAI40_02710 PF00849 RNA pseudouridylate synthase FAI40_02720 PF01494 FAD binding domain FAI40_02735 PF01230 HIT domain FAI40_02785 PF00092 von Willebrand factor type A domain FAI40_02790 PF00962 Adenosine/AMP deaminase FAI40_02805 PF03205 Molybdopterin guanine dinucleotide synthesis protein B FAI40_02825 PF00106 short chain dehydrogenase FAI40_02830 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FAI40_02830 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FAI40_02840 PF00361 Proton-conducting membrane transporter FAI40_02845 PF00361 Proton-conducting membrane transporter FAI40_02850 PF00361 Proton-conducting membrane transporter FAI40_02850 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FAI40_02855 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FAI40_02860 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 FAI40_02865 PF12838 4Fe-4S dicluster domain FAI40_02870 PF00146 NADH dehydrogenase FAI40_02875 PF01568 Molydopterin dinucleotide binding domain FAI40_02875 PF00384 Molybdopterin oxidoreductase FAI40_02875 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FAI40_02875 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FAI40_02880 PF10531 SLBB domain FAI40_02880 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FAI40_02880 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FAI40_02890 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FAI40_02890 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FAI40_02895 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FAI40_02900 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 FAI40_02925 PF00588 SpoU rRNA Methylase family FAI40_02925 PF08032 RNA 2'-O ribose methyltransferase substrate binding FAI40_02930 PF00881 Nitroreductase family FAI40_02940 PF00849 RNA pseudouridylate synthase FAI40_02945 PF00140 Sigma-70 factor, region 1.2 FAI40_02945 PF04545 Sigma-70, region 4 FAI40_02945 PF04542 Sigma-70 region 2 FAI40_02955 PF03459 TOBE domain FAI40_02960 PF00162 Phosphoglycerate kinase FAI40_02965 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FAI40_02965 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FAI40_02975 PF00324 Amino acid permease FAI40_03000 PF00589 Phage integrase family FAI40_03000 PF13356 Arm DNA-binding domain FAI40_03115 PF01258 Prokaryotic dksA/traR C4-type zinc finger FAI40_03120 PF01595 Cyclin M transmembrane N-terminal domain FAI40_03120 PF03471 Transporter associated domain FAI40_03120 PF00571 CBS domain FAI40_03125 PF06463 Molybdenum Cofactor Synthesis C FAI40_03125 PF04055 Radical SAM superfamily FAI40_03145 PF04794 YdjC-like protein FAI40_03175 PF02677 Epoxyqueuosine reductase QueH FAI40_03185 PF00570 HRDC domain FAI40_03185 PF01612 3'-5' exonuclease FAI40_03190 PF00085 Thioredoxin FAI40_03195 PF12705 PD-(D/E)XK nuclease superfamily FAI40_03195 PF00580 UvrD/REP helicase N-terminal domain FAI40_03195 PF13361 UvrD-like helicase C-terminal domain FAI40_03210 PF01555 DNA methylase FAI40_03220 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE FAI40_03225 PF07992 Pyridine nucleotide-disulphide oxidoreductase FAI40_03230 PF00583 Acetyltransferase (GNAT) family FAI40_03290 PF14489 QueF-like protein FAI40_03310 PF00535 Glycosyl transferase family 2 FAI40_03350 PF01943 Polysaccharide biosynthesis protein FAI40_03355 PF00171 Aldehyde dehydrogenase family FAI40_03360 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FAI40_03375 PF00884 Sulfatase FAI40_03380 PF00884 Sulfatase FAI40_03385 PF00781 Diacylglycerol kinase catalytic domain FAI40_03420 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FAI40_03475 PF02965 Vitamin B12 dependent methionine synthase, activation domain FAI40_03475 PF02310 B12 binding domain FAI40_03475 PF02607 B12 binding domain FAI40_03475 PF00809 Pterin binding enzyme FAI40_03475 PF02574 Homocysteine S-methyltransferase FAI40_03490 PF00916 Sulfate permease family FAI40_03490 PF01740 STAS domain FAI40_03510 PF08241 Methyltransferase domain FAI40_03540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FAI40_03540 PF03466 LysR substrate binding domain FAI40_03545 PF12146 Serine aminopeptidase, S33 FAI40_03555 PF00586 AIR synthase related protein, N-terminal domain FAI40_03555 PF02769 AIR synthase related protein, C-terminal domain FAI40_03560 PF01924 Hydrogenase formation hypA family FAI40_03565 PF01455 HupF/HypC family FAI40_03570 PF02492 CobW/HypB/UreG, nucleotide-binding domain FAI40_03580 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA FAI40_03585 PF13247 4Fe-4S dicluster domain FAI40_03590 PF00361 Proton-conducting membrane transporter FAI40_03595 PF00146 NADH dehydrogenase FAI40_03600 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FAI40_03600 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FAI40_03600 PF00374 Nickel-dependent hydrogenase FAI40_03610 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FAI40_03615 PF07450 Formate hydrogenlyase maturation protein HycH FAI40_03620 PF01750 Hydrogenase maturation protease FAI40_03625 PF12800 4Fe-4S binding domain FAI40_03625 PF13247 4Fe-4S dicluster domain FAI40_03630 PF01568 Molydopterin dinucleotide binding domain FAI40_03630 PF00384 Molybdopterin oxidoreductase FAI40_03630 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FAI40_03635 PF01300 Telomere recombination FAI40_03635 PF00708 Acylphosphatase FAI40_03635 PF17788 HypF Kae1-like domain FAI40_03635 PF07503 HypF finger FAI40_03650 PF03824 High-affinity nickel-transport protein FAI40_03690 PF01212 Beta-eliminating lyase FAI40_03695 PF00994 Probable molybdopterin binding domain FAI40_03695 PF03454 MoeA C-terminal region (domain IV) FAI40_03695 PF03453 MoeA N-terminal region (domain I and II) FAI40_03710 PF00692 dUTPase FAI40_03805 PF00107 Zinc-binding dehydrogenase FAI40_03805 PF08240 Alcohol dehydrogenase GroES-like domain FAI40_03840 PF06965 Na+/H+ antiporter 1 FAI40_03845 PF02661 Fic/DOC family FAI40_03845 PF13784 Fic/DOC family N-terminal FAI40_03860 PF00145 C-5 cytosine-specific DNA methylase FAI40_03900 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FAI40_03900 PF07992 Pyridine nucleotide-disulphide oxidoreductase FAI40_03905 PF01493 GXGXG motif FAI40_03905 PF04898 Glutamate synthase central domain FAI40_03905 PF01645 Conserved region in glutamate synthase FAI40_03905 PF00310 Glutamine amidotransferases class-II FAI40_03960 PF07859 alpha/beta hydrolase fold FAI40_03975 PF02661 Fic/DOC family FAI40_03975 PF17841 BID domain of Bartonella effector protein (Bep) FAI40_04055 PF02384 N-6 DNA Methylase FAI40_04095 PF11867 Domain of unknown function (DUF3387) FAI40_04095 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) FAI40_04095 PF18766 SWI2/SNF2 ATPase FAI40_04105 PF01420 Type I restriction modification DNA specificity domain FAI40_04120 PF02384 N-6 DNA Methylase FAI40_04120 PF12161 HsdM N-terminal domain FAI40_04165 PF13395 HNH endonuclease FAI40_04165 PF18541 RuvC endonuclease subdomain 3 FAI40_04170 PF13395 HNH endonuclease FAI40_04170 PF18541 RuvC endonuclease subdomain 3 FAI40_04180 PF09827 CRISPR associated protein Cas2 FAI40_04210 PF08240 Alcohol dehydrogenase GroES-like domain FAI40_04210 PF00107 Zinc-binding dehydrogenase FAI40_04275 PF00248 Aldo/keto reductase family FAI40_04525 PF03477 ATP cone domain FAI40_04525 PF13597 Anaerobic ribonucleoside-triphosphate reductase FAI40_04630 PF04966 Carbohydrate-selective porin, OprB family FAI40_04865 PF00465 Iron-containing alcohol dehydrogenase FAI40_04890 PF07728 AAA domain (dynein-related subfamily) FAI40_04890 PF12102 Domain of unknown function (DUF3578) FAI40_04905 PF00654 Voltage gated chloride channel FAI40_04910 PF11127 Protein of unknown function (DUF2892) FAI40_04910 PF00581 Rhodanese-like domain FAI40_04920 PF17768 RecJ OB domain FAI40_04920 PF01368 DHH family FAI40_04920 PF02272 DHHA1 domain FAI40_04920 PF10141 Single-strand DNA-specific exonuclease, C terminal domain FAI40_04925 PF00154 recA bacterial DNA recombination protein FAI40_04940 PF00364 Biotin-requiring enzyme FAI40_04940 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FAI40_04940 PF02817 e3 binding domain FAI40_04960 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FAI40_04960 PF07497 Rho termination factor, RNA-binding domain FAI40_04960 PF07498 Rho termination factor, N-terminal domain FAI40_04965 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FAI40_04965 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FAI40_04980 PF01555 DNA methylase FAI40_04990 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FAI40_04990 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FAI40_04995 PF10396 GTP-binding protein TrmE N-terminus FAI40_04995 PF01926 50S ribosome-binding GTPase FAI40_04995 PF12631 MnmE helical domain FAI40_05005 PF00593 TonB dependent receptor FAI40_05010 PF00085 Thioredoxin FAI40_05020 PF01134 Glucose inhibited division protein A FAI40_05020 PF13932 GidA associated domain FAI40_05025 PF02527 rRNA small subunit methyltransferase G FAI40_05030 PF13614 AAA domain FAI40_05035 PF17762 HTH domain found in ParB protein FAI40_05035 PF02195 ParB-like nuclease domain FAI40_05050 PF13811 Domain of unknown function (DUF4186) FAI40_05060 PF01329 Pterin 4 alpha carbinolamine dehydratase FAI40_05065 PF00351 Biopterin-dependent aromatic amino acid hydroxylase FAI40_05080 PF13439 Glycosyltransferase Family 4 FAI40_05080 PF00534 Glycosyl transferases group 1 FAI40_05085 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FAI40_05085 PF01872 RibD C-terminal domain FAI40_05090 PF00677 Lumazine binding domain FAI40_05095 PF00925 GTP cyclohydrolase II FAI40_05095 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FAI40_05100 PF00885 6,7-dimethyl-8-ribityllumazine synthase FAI40_05115 PF00574 Clp protease FAI40_05125 PF09278 MerR, DNA binding FAI40_05125 PF00376 MerR family regulatory protein FAI40_05135 PF01554 MatE FAI40_05145 PF09335 SNARE associated Golgi protein FAI40_05155 PF13419 Haloacid dehalogenase-like hydrolase FAI40_05160 PF01208 Uroporphyrinogen decarboxylase (URO-D) FAI40_05165 PF02545 Maf-like protein FAI40_05175 PF03960 ArsC family FAI40_05190 PF01867 CRISPR associated protein Cas1 FAI40_05195 PF18019 HD domain FAI40_05200 PF09611 CRISPR-associated protein (Cas_Csy1) FAI40_05205 PF09614 CRISPR-associated protein (Cas_Csy2) FAI40_05210 PF09615 CRISPR-associated protein (Cas_Csy3) FAI40_05215 PF09618 CRISPR-associated protein (Cas_Csy4) FAI40_05220 PF02694 Uncharacterised BCR, YnfA/UPF0060 family FAI40_05225 PF13286 Phosphohydrolase-associated domain FAI40_05225 PF01966 HD domain FAI40_05250 PF00210 Ferritin-like domain FAI40_05260 PF00593 TonB dependent receptor FAI40_05270 PF00483 Nucleotidyl transferase FAI40_05270 PF01050 Mannose-6-phosphate isomerase FAI40_05275 PF12849 PBP superfamily domain FAI40_05285 PF13098 Thioredoxin-like domain FAI40_05285 PF11412 Disulphide bond corrector protein DsbC FAI40_05285 PF02683 Cytochrome C biogenesis protein transmembrane region FAI40_05290 PF00106 short chain dehydrogenase FAI40_05300 PF13419 Haloacid dehalogenase-like hydrolase FAI40_05305 PF00692 dUTPase FAI40_05310 PF00034 Cytochrome c FAI40_05310 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FAI40_05315 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FAI40_05320 PF01799 [2Fe-2S] binding domain FAI40_05320 PF00111 2Fe-2S iron-sulfur cluster binding domain FAI40_05330 PF13478 XdhC Rossmann domain FAI40_05330 PF02625 XdhC and CoxI family FAI40_05335 PF00589 Phage integrase family FAI40_05335 PF02899 Phage integrase, N-terminal SAM-like domain FAI40_05340 PF18074 Primosomal protein N C-terminal domain FAI40_05340 PF17764 3′ DNA-binding domain (3′BD) FAI40_05340 PF00270 DEAD/DEAH box helicase FAI40_05340 PF18319 PriA DNA helicase Cys-rich region (CRR) domain FAI40_05345 PF00436 Single-strand binding protein family FAI40_05360 PF06508 Queuosine biosynthesis protein QueC FAI40_05365 PF00175 Oxidoreductase NAD-binding domain FAI40_05365 PF00042 Globin FAI40_05365 PF00970 Oxidoreductase FAD-binding domain FAI40_05385 PF06628 Catalase-related immune-responsive FAI40_05385 PF00199 Catalase FAI40_05390 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FAI40_05390 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FAI40_05390 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FAI40_05400 PF02405 Permease MlaE FAI40_05405 PF00005 ABC transporter FAI40_05410 PF18073 Rubredoxin metal binding domain FAI40_05410 PF06745 KaiC FAI40_05420 PF00593 TonB dependent receptor FAI40_05425 PF01402 Ribbon-helix-helix protein, copG family FAI40_05425 PF08753 NikR C terminal nickel binding domain FAI40_05430 PF00005 ABC transporter FAI40_05435 PF00005 ABC transporter FAI40_05440 PF00528 Binding-protein-dependent transport system inner membrane component FAI40_05445 PF00528 Binding-protein-dependent transport system inner membrane component FAI40_05450 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FAI40_05475 PF00664 ABC transporter transmembrane region FAI40_05475 PF00005 ABC transporter FAI40_05480 PF00005 ABC transporter FAI40_05480 PF00664 ABC transporter transmembrane region FAI40_05485 PF01654 Cytochrome bd terminal oxidase subunit I FAI40_05490 PF02322 Cytochrome bd terminal oxidase subunit II FAI40_05500 PF01227 GTP cyclohydrolase I FAI40_05505 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FAI40_05505 PF02152 Dihydroneopterin aldolase FAI40_05510 PF00809 Pterin binding enzyme FAI40_05520 PF00893 Small Multidrug Resistance protein FAI40_05525 PF00326 Prolyl oligopeptidase family FAI40_05525 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FAI40_05530 PF01205 Uncharacterized protein family UPF0029 FAI40_05545 PF00561 alpha/beta hydrolase fold FAI40_05545 PF08386 TAP-like protein FAI40_05570 PF17760 UvrA interaction domain FAI40_05570 PF17755 UvrA DNA-binding domain FAI40_05580 PF00183 Hsp90 protein FAI40_05585 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FAI40_05585 PF00205 Thiamine pyrophosphate enzyme, central domain FAI40_05585 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FAI40_05590 PF08240 Alcohol dehydrogenase GroES-like domain FAI40_05590 PF00107 Zinc-binding dehydrogenase FAI40_05595 PF00171 Aldehyde dehydrogenase family FAI40_05600 PF04055 Radical SAM superfamily FAI40_05600 PF06463 Molybdenum Cofactor Synthesis C FAI40_05635 PF00005 ABC transporter FAI40_05640 PF00950 ABC 3 transport family FAI40_05650 PF00762 Ferrochelatase FAI40_05655 PF01118 Semialdehyde dehydrogenase, NAD binding domain FAI40_05655 PF02774 Semialdehyde dehydrogenase, dimerisation domain FAI40_05670 PF02779 Transketolase, pyrimidine binding domain FAI40_05670 PF00676 Dehydrogenase E1 component FAI40_05670 PF16078 2-oxoglutarate dehydrogenase N-terminus FAI40_05670 PF16870 2-oxoglutarate dehydrogenase C-terminal FAI40_05690 PF00593 TonB dependent receptor FAI40_05690 PF07715 TonB-dependent Receptor Plug Domain FAI40_05695 PF17848 Acetyl-coA carboxylase zinc finger domain FAI40_05695 PF01039 Carboxyl transferase domain FAI40_05700 PF08245 Mur ligase middle domain FAI40_05700 PF02875 Mur ligase family, glutamate ligase domain FAI40_05705 PF03796 DnaB-like helicase C terminal domain FAI40_05705 PF00772 DnaB-like helicase N terminal domain FAI40_05710 PF00970 Oxidoreductase FAD-binding domain FAI40_05710 PF00042 Globin FAI40_05710 PF00175 Oxidoreductase NAD-binding domain FAI40_05720 PF01725 Ham1 family FAI40_05725 PF03725 3' exoribonuclease family, domain 2 FAI40_05725 PF01138 3' exoribonuclease family, domain 1 FAI40_05735 PF17092 Penicillin-binding protein OB-like domain FAI40_05735 PF00912 Transglycosylase FAI40_05735 PF00905 Penicillin binding protein transpeptidase domain FAI40_05750 PF01618 MotA/TolQ/ExbB proton channel family FAI40_05755 PF02472 Biopolymer transport protein ExbD/TolR FAI40_05760 PF02472 Biopolymer transport protein ExbD/TolR FAI40_05770 PF00924 Mechanosensitive ion channel FAI40_05775 PF13593 SBF-like CPA transporter family (DUF4137) FAI40_05780 PF00730 HhH-GPD superfamily base excision DNA repair protein FAI40_05780 PF14815 NUDIX domain FAI40_05800 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain FAI40_05800 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain FAI40_05805 PF02548 Ketopantoate hydroxymethyltransferase FAI40_05815 PF00480 ROK family FAI40_05825 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FAI40_05825 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FAI40_05825 PF01842 ACT domain FAI40_05830 PF00266 Aminotransferase class-V FAI40_05840 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain FAI40_05840 PF00730 HhH-GPD superfamily base excision DNA repair protein FAI40_05845 PF01176 Translation initiation factor 1A / IF-1 FAI40_05850 PF02545 Maf-like protein FAI40_05860 PF03884 DNA gyrase inhibitor YacG FAI40_05870 PF18766 SWI2/SNF2 ATPase FAI40_05870 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) FAI40_05870 PF12008 Type I restriction and modification enzyme - subunit R C terminal FAI40_05880 PF12161 HsdM N-terminal domain FAI40_05880 PF02384 N-6 DNA Methylase FAI40_05885 PF00248 Aldo/keto reductase family FAI40_05905 PF02611 CDP-diacylglycerol pyrophosphatase FAI40_05945 PF07687 Peptidase dimerisation domain FAI40_05945 PF01546 Peptidase family M20/M25/M40 FAI40_05975 PF00251 Glycosyl hydrolases family 32 N-terminal domain FAI40_05975 PF08244 Glycosyl hydrolases family 32 C terminal FAI40_05980 PF07992 Pyridine nucleotide-disulphide oxidoreductase FAI40_05980 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FAI40_05985 PF02560 Cyanate lyase C-terminal domain FAI40_05990 PF00581 Rhodanese-like domain FAI40_06010 PF04403 Paraquat-inducible protein A FAI40_06015 PF02470 MlaD protein FAI40_06025 PF02634 FdhD/NarQ family FAI40_06035 PF02357 Transcription termination factor nusG FAI40_06035 PF00467 KOW motif FAI40_06055 PF00213 ATP synthase delta (OSCP) subunit FAI40_06060 PF02874 ATP synthase alpha/beta family, beta-barrel domain FAI40_06060 PF00306 ATP synthase alpha/beta chain, C terminal domain FAI40_06060 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FAI40_06065 PF00231 ATP synthase FAI40_06070 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FAI40_06070 PF02874 ATP synthase alpha/beta family, beta-barrel domain FAI40_06075 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain FAI40_06135 PF05443 ROS/MUCR transcriptional regulator protein FAI40_06165 PF03807 NADP oxidoreductase coenzyme F420-dependent FAI40_06165 PF14748 Pyrroline-5-carboxylate reductase dimerisation FAI40_06175 PF01370 NAD dependent epimerase/dehydratase family FAI40_06180 PF01790 Prolipoprotein diacylglyceryl transferase FAI40_06200 PF01195 Peptidyl-tRNA hydrolase FAI40_06215 PF01467 Cytidylyltransferase-like FAI40_06220 PF01467 Cytidylyltransferase-like FAI40_06230 PF02590 Predicted SPOUT methyltransferase FAI40_06280 PF05443 ROS/MUCR transcriptional regulator protein FAI40_06310 PF14748 Pyrroline-5-carboxylate reductase dimerisation FAI40_06310 PF03807 NADP oxidoreductase coenzyme F420-dependent FAI40_06320 PF01370 NAD dependent epimerase/dehydratase family FAI40_06325 PF01790 Prolipoprotein diacylglyceryl transferase FAI40_06335 PF01386 Ribosomal L25p family FAI40_06335 PF14693 Ribosomal protein TL5, C-terminal domain FAI40_06340 PF01195 Peptidyl-tRNA hydrolase FAI40_06345 PF06071 Protein of unknown function (DUF933) FAI40_06345 PF01926 50S ribosome-binding GTPase FAI40_06350 PF01467 Cytidylyltransferase-like FAI40_06360 PF02590 Predicted SPOUT methyltransferase FAI40_06370 PF00753 Metallo-beta-lactamase superfamily FAI40_06425 PF02861 Clp amino terminal domain, pathogenicity island component FAI40_06425 PF07724 AAA domain (Cdc48 subfamily) FAI40_06425 PF17871 AAA lid domain FAI40_06425 PF00004 ATPase family associated with various cellular activities (AAA) FAI40_06425 PF10431 C-terminal, D2-small domain, of ClpB protein FAI40_06430 PF02617 ATP-dependent Clp protease adaptor protein ClpS FAI40_06435 PF07943 Penicillin-binding protein 5, C-terminal domain FAI40_06435 PF00768 D-alanyl-D-alanine carboxypeptidase FAI40_06440 PF00557 Metallopeptidase family M24 FAI40_06455 PF12170 DNA polymerase III tau subunit V interacting with alpha FAI40_06455 PF12169 DNA polymerase III subunits gamma and tau domain III FAI40_06455 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding FAI40_06460 PF02575 YbaB/EbfC DNA-binding family FAI40_06465 PF13662 Toprim domain FAI40_06465 PF02132 RecR protein FAI40_06480 PF02224 Cytidylate kinase FAI40_06485 PF00575 S1 RNA binding domain FAI40_06490 PF04261 Dyp-type peroxidase family FAI40_06510 PF05193 Peptidase M16 inactive domain FAI40_06510 PF00675 Insulinase (Peptidase family M16) FAI40_06520 PF01070 FMN-dependent dehydrogenase FAI40_06525 PF00528 Binding-protein-dependent transport system inner membrane component FAI40_06530 PF09383 NIL domain FAI40_06530 PF00005 ABC transporter FAI40_06535 PF03180 NLPA lipoprotein FAI40_06540 PF13520 Amino acid permease FAI40_06545 PF13520 Amino acid permease FAI40_06555 PF05198 Translation initiation factor IF-3, N-terminal domain FAI40_06555 PF00707 Translation initiation factor IF-3, C-terminal domain FAI40_06560 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FAI40_06560 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FAI40_06560 PF02824 TGS domain FAI40_06560 PF03129 Anticodon binding domain FAI40_06570 PF01025 GrpE FAI40_06575 PF03668 P-loop ATPase protein family FAI40_06580 PF00924 Mechanosensitive ion channel FAI40_06580 PF12795 Mechanosensitive ion channel porin domain FAI40_06580 PF12794 Mechanosensitive ion channel inner membrane domain 1 FAI40_06585 PF01180 Dihydroorotate dehydrogenase FAI40_06590 PF01207 Dihydrouridine synthase (Dus) FAI40_06595 PF00989 PAS fold FAI40_06595 PF00512 His Kinase A (phospho-acceptor) domain FAI40_06595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FAI40_06595 PF00672 HAMP domain FAI40_06600 PF00158 Sigma-54 interaction domain FAI40_06600 PF02954 Bacterial regulatory protein, Fis family FAI40_06600 PF00072 Response regulator receiver domain FAI40_06605 PF17209 Hfq protein FAI40_06610 PF13167 GTP-binding GTPase N-terminal FAI40_06610 PF01926 50S ribosome-binding GTPase FAI40_06610 PF16360 GTP-binding GTPase Middle Region FAI40_06620 PF13193 AMP-binding enzyme C-terminal domain FAI40_06620 PF00501 AMP-binding enzyme FAI40_06630 PF14765 Polyketide synthase dehydratase FAI40_06630 PF00550 Phosphopantetheine attachment site FAI40_06630 PF00698 Acyl transferase domain FAI40_06630 PF08240 Alcohol dehydrogenase GroES-like domain FAI40_06630 PF16197 Ketoacyl-synthetase C-terminal extension FAI40_06630 PF00109 Beta-ketoacyl synthase, N-terminal domain FAI40_06630 PF02801 Beta-ketoacyl synthase, C-terminal domain FAI40_06630 PF08659 KR domain FAI40_06635 PF00501 AMP-binding enzyme FAI40_06640 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FAI40_06645 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FAI40_06665 PF00572 Ribosomal protein L13 FAI40_06670 PF00380 Ribosomal protein S9/S16 FAI40_06675 PF01063 Amino-transferase class IV FAI40_06680 PF00994 Probable molybdopterin binding domain FAI40_06680 PF03453 MoeA N-terminal region (domain I and II) FAI40_06680 PF03454 MoeA C-terminal region (domain IV) FAI40_06685 PF04055 Radical SAM superfamily FAI40_06685 PF06463 Molybdenum Cofactor Synthesis C FAI40_06690 PF01967 MoaC family FAI40_06695 PF12804 MobA-like NTP transferase domain FAI40_06695 PF01967 MoaC family FAI40_06705 PF02391 MoaE protein FAI40_06720 PF03692 Putative zinc- or iron-chelating domain FAI40_06735 PF00529 HlyD membrane-fusion protein of T1SS FAI40_06735 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FAI40_06740 PF02321 Outer membrane efflux protein FAI40_06745 PF00226 DnaJ domain FAI40_06745 PF01556 DnaJ C terminal domain FAI40_06745 PF00684 DnaJ central domain FAI40_06755 PF04966 Carbohydrate-selective porin, OprB family FAI40_06760 PF04966 Carbohydrate-selective porin, OprB family FAI40_06840 PF00547 Urease, gamma subunit FAI40_06845 PF00699 Urease beta subunit FAI40_06850 PF00449 Urease alpha-subunit, N-terminal domain FAI40_06850 PF01979 Amidohydrolase family FAI40_06855 PF05194 UreE urease accessory protein, C-terminal domain FAI40_06855 PF02814 UreE urease accessory protein, N-terminal domain FAI40_06860 PF01730 UreF FAI40_06865 PF02492 CobW/HypB/UreG, nucleotide-binding domain FAI40_06870 PF01774 UreD urease accessory protein FAI40_06875 PF03253 Urea transporter FAI40_06890 PF01810 LysE type translocator FAI40_06905 PF01292 Prokaryotic cytochrome b561 FAI40_06915 PF13649 Methyltransferase domain FAI40_06920 PF08241 Methyltransferase domain FAI40_06930 PF00155 Aminotransferase class I and II FAI40_06935 PF00202 Aminotransferase class-III FAI40_06945 PF00664 ABC transporter transmembrane region FAI40_06945 PF03412 Peptidase C39 family FAI40_06945 PF00005 ABC transporter FAI40_06985 PF00535 Glycosyl transferase family 2 FAI40_06990 PF00528 Binding-protein-dependent transport system inner membrane component FAI40_06995 PF00528 Binding-protein-dependent transport system inner membrane component FAI40_07000 PF00005 ABC transporter FAI40_07005 PF01895 PhoU domain FAI40_07010 PF00324 Amino acid permease FAI40_07015 PF00324 Amino acid permease FAI40_07020 PF00529 HlyD membrane-fusion protein of T1SS FAI40_07020 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FAI40_07025 PF00873 AcrB/AcrD/AcrF family FAI40_07030 PF02321 Outer membrane efflux protein FAI40_07045 PF01361 Tautomerase enzyme FAI40_07060 PF13419 Haloacid dehalogenase-like hydrolase FAI40_07075 PF00579 tRNA synthetases class I (W and Y) FAI40_07080 PF02129 X-Pro dipeptidyl-peptidase (S15 family) FAI40_07090 PF00266 Aminotransferase class-V FAI40_07095 PF00111 2Fe-2S iron-sulfur cluster binding domain FAI40_07105 PF10417 C-terminal domain of 1-Cys peroxiredoxin FAI40_07105 PF00578 AhpC/TSA family FAI40_07110 PF07992 Pyridine nucleotide-disulphide oxidoreductase FAI40_07110 PF13192 Thioredoxin domain FAI40_07140 PF07859 alpha/beta hydrolase fold FAI40_07150 PF01053 Cys/Met metabolism PLP-dependent enzyme FAI40_07170 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain FAI40_07170 PF05221 S-adenosyl-L-homocysteine hydrolase FAI40_07175 PF01042 Endoribonuclease L-PSP FAI40_07180 PF02567 Phenazine biosynthesis-like protein FAI40_07190 PF04371 Porphyromonas-type peptidyl-arginine deiminase FAI40_07195 PF17954 Quercetinase C-terminal cupin domain FAI40_07195 PF02678 Pirin FAI40_07215 PF03853 YjeF-related protein N-terminus FAI40_07215 PF01256 Carbohydrate kinase FAI40_07250 PF03951 Glutamine synthetase, beta-Grasp domain FAI40_07250 PF00120 Glutamine synthetase, catalytic domain FAI40_07255 PF06965 Na+/H+ antiporter 1 FAI40_07260 PF00300 Histidine phosphatase superfamily (branch 1) FAI40_07265 PF14572 Phosphoribosyl synthetase-associated domain FAI40_07265 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FAI40_07280 PF04321 RmlD substrate binding domain FAI40_07285 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase FAI40_07290 PF02525 Flavodoxin-like fold FAI40_07300 PF00625 Guanylate kinase FAI40_07315 PF01012 Electron transfer flavoprotein domain FAI40_07315 PF00766 Electron transfer flavoprotein FAD-binding domain FAI40_07320 PF01012 Electron transfer flavoprotein domain FAI40_07330 PF02390 Putative methyltransferase FAI40_07335 PF02772 S-adenosylmethionine synthetase, central domain FAI40_07335 PF00438 S-adenosylmethionine synthetase, N-terminal domain FAI40_07335 PF02773 S-adenosylmethionine synthetase, C-terminal domain FAI40_07340 PF01113 Dihydrodipicolinate reductase, N-terminus FAI40_07340 PF05173 Dihydrodipicolinate reductase, C-terminus FAI40_07345 PF00226 DnaJ domain FAI40_07345 PF00684 DnaJ central domain FAI40_07345 PF01556 DnaJ C terminal domain FAI40_07350 PF00012 Hsp70 protein FAI40_07370 PF00692 dUTPase FAI40_07375 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FAI40_07380 PF03641 Possible lysine decarboxylase FAI40_07395 PF07690 Major Facilitator Superfamily FAI40_07400 PF00156 Phosphoribosyl transferase domain FAI40_07405 PF13180 PDZ domain FAI40_07420 PF00709 Adenylosuccinate synthetase FAI40_07425 PF02881 SRP54-type protein, helical bundle domain FAI40_07425 PF00448 SRP54-type protein, GTPase domain FAI40_07430 PF04055 Radical SAM superfamily FAI40_07430 PF00919 Uncharacterized protein family UPF0004 FAI40_07435 PF01678 Diaminopimelate epimerase FAI40_07440 PF03880 DbpA RNA binding domain FAI40_07440 PF00270 DEAD/DEAH box helicase FAI40_07440 PF00271 Helicase conserved C-terminal domain FAI40_07445 PF02622 Uncharacterized ACR, COG1678 FAI40_07450 PF17871 AAA lid domain FAI40_07450 PF07724 AAA domain (Cdc48 subfamily) FAI40_07450 PF00004 ATPase family associated with various cellular activities (AAA) FAI40_07450 PF02861 Clp amino terminal domain, pathogenicity island component FAI40_07450 PF10431 C-terminal, D2-small domain, of ClpB protein FAI40_07495 PF00141 Peroxidase FAI40_07500 PF00106 short chain dehydrogenase FAI40_07520 PF03062 MBOAT, membrane-bound O-acyltransferase family FAI40_07530 PF00668 Condensation domain FAI40_07530 PF13193 AMP-binding enzyme C-terminal domain FAI40_07530 PF00550 Phosphopantetheine attachment site FAI40_07530 PF00501 AMP-binding enzyme FAI40_07530 PF00975 Thioesterase domain FAI40_07545 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FAI40_07545 PF00034 Cytochrome c FAI40_07550 PF00732 GMC oxidoreductase FAI40_07550 PF05199 GMC oxidoreductase FAI40_07565 PF01430 Hsp33 protein FAI40_07570 PF00202 Aminotransferase class-III FAI40_07580 PF02416 mttA/Hcf106 family FAI40_07585 PF06574 FAD synthetase FAI40_07585 PF01687 Riboflavin kinase FAI40_07590 PF00133 tRNA synthetases class I (I, L, M and V) FAI40_07590 PF08264 Anticodon-binding domain of tRNA FAI40_07590 PF06827 Zinc finger found in FPG and IleRS FAI40_07595 PF01252 Signal peptidase (SPase) II FAI40_07605 PF01119 DNA mismatch repair protein, C-terminal domain FAI40_07605 PF08676 MutL C terminal dimerisation domain FAI40_07615 PF01464 Transglycosylase SLT domain FAI40_07625 PF05145 Transition state regulatory protein AbrB FAI40_07635 PF00294 pfkB family carbohydrate kinase FAI40_07635 PF01467 Cytidylyltransferase-like FAI40_07650 PF02511 Thymidylate synthase complementing protein FAI40_07660 PF00881 Nitroreductase family FAI40_07665 PF00814 Glycoprotease family FAI40_07680 PF01475 Ferric uptake regulator family FAI40_07690 PF00795 Carbon-nitrogen hydrolase FAI40_07720 PF03966 Trm112p-like protein FAI40_07750 PF00892 EamA-like transporter family FAI40_07760 PF07715 TonB-dependent Receptor Plug Domain FAI40_07760 PF00593 TonB dependent receptor FAI40_07765 PF01594 AI-2E family transporter FAI40_07770 PF00719 Inorganic pyrophosphatase FAI40_07780 PF00005 ABC transporter FAI40_07780 PF12848 ABC transporter FAI40_07790 PF01118 Semialdehyde dehydrogenase, NAD binding domain FAI40_07820 PF16363 GDP-mannose 4,6 dehydratase FAI40_07825 PF00483 Nucleotidyl transferase FAI40_07845 PF04216 Protein involved in formate dehydrogenase formation FAI40_07850 PF01292 Prokaryotic cytochrome b561 FAI40_07855 PF09163 Formate dehydrogenase N, transmembrane FAI40_07855 PF12800 4Fe-4S binding domain FAI40_07855 PF13247 4Fe-4S dicluster domain FAI40_07860 PF01568 Molydopterin dinucleotide binding domain FAI40_07860 PF00384 Molybdopterin oxidoreductase FAI40_07860 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FAI40_07875 PF00032 Cytochrome b(C-terminal)/b6/petD FAI40_07875 PF00033 Cytochrome b/b6/petB FAI40_07880 PF00355 Rieske [2Fe-2S] domain FAI40_07880 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal FAI40_07885 PF00694 Aconitase C-terminal domain FAI40_07885 PF00330 Aconitase family (aconitate hydratase) FAI40_07890 PF00285 Citrate synthase, C-terminal domain FAI40_07895 PF18324 Hypothetical protein TT1725 FAI40_07895 PF00180 Isocitrate/isopropylmalate dehydrogenase FAI40_07940 PF00478 IMP dehydrogenase / GMP reductase domain FAI40_07945 PF02627 Carboxymuconolactone decarboxylase family FAI40_07950 PF00756 Putative esterase FAI40_07960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FAI40_07960 PF03466 LysR substrate binding domain FAI40_07965 PF08240 Alcohol dehydrogenase GroES-like domain FAI40_07965 PF00107 Zinc-binding dehydrogenase FAI40_07990 PF09330 D-lactate dehydrogenase, membrane binding FAI40_07990 PF01565 FAD binding domain FAI40_07995 PF00107 Zinc-binding dehydrogenase FAI40_07995 PF08240 Alcohol dehydrogenase GroES-like domain FAI40_08010 PF00083 Sugar (and other) transporter FAI40_08010 PF08946 Osmosensory transporter coiled coil FAI40_08040 PF13614 AAA domain FAI40_08045 PF17762 HTH domain found in ParB protein FAI40_08045 PF02195 ParB-like nuclease domain FAI40_08055 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FAI40_08085 PF03432 Relaxase/Mobilisation nuclease domain FAI40_08085 PF18821 Large polyvalent protein-associated domain 7 FAI40_08130 PF03793 PASTA domain FAI40_08130 PF00069 Protein kinase domain FAI40_08145 PF13677 Membrane MotB of proton-channel complex MotA/MotB FAI40_08145 PF00691 OmpA family FAI40_08240 PF00881 Nitroreductase family FAI40_08245 PF00221 Aromatic amino acid lyase FAI40_08250 PF02534 Type IV secretory system Conjugative DNA transfer FAI40_08260 PF08401 Domain of unknown function (DUF1738) FAI40_08260 PF18818 Metallopeptidase superfamily domain FAI40_08260 PF13362 Toprim domain FAI40_08270 PF01751 Toprim domain FAI40_08270 PF01131 DNA topoisomerase FAI40_08275 PF00436 Single-strand binding protein family FAI40_08285 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ FAI40_08290 PF04221 RelB antitoxin FAI40_08330 PF03743 Bacterial conjugation TrbI-like protein FAI40_08340 PF03524 Conjugal transfer protein FAI40_08345 PF04335 VirB8 protein FAI40_08350 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FAI40_08360 PF04956 TrbC/VIRB2 family FAI40_08365 PF00437 Type II/IV secretion system protein FAI40_08390 PF00543 Nitrogen regulatory protein P-II FAI40_08400 PF00909 Ammonium Transporter Family FAI40_08405 PF02978 Signal peptide binding domain FAI40_08405 PF02881 SRP54-type protein, helical bundle domain FAI40_08405 PF00448 SRP54-type protein, GTPase domain FAI40_08410 PF00886 Ribosomal protein S16 FAI40_08415 PF01782 RimM N-terminal domain FAI40_08420 PF01746 tRNA (Guanine-1)-methyltransferase FAI40_08425 PF01245 Ribosomal protein L19 FAI40_08455 PF03169 OPT oligopeptide transporter protein FAI40_08475 PF02401 LytB protein FAI40_08480 PF00075 RNase H FAI40_08585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FAI40_08585 PF03466 LysR substrate binding domain FAI40_08590 PF03358 NADPH-dependent FMN reductase FAI40_08605 PF13520 Amino acid permease FAI40_08610 PF00892 EamA-like transporter family FAI40_08615 PF00291 Pyridoxal-phosphate dependent enzyme FAI40_08620 PF06426 Serine acetyltransferase, N-terminal FAI40_08620 PF00132 Bacterial transferase hexapeptide (six repeats) FAI40_08675 PF00155 Aminotransferase class I and II FAI40_08685 PF03949 Malic enzyme, NAD binding domain FAI40_08685 PF00390 Malic enzyme, N-terminal domain FAI40_08695 PF03918 Cytochrome C biogenesis protein FAI40_08705 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal FAI40_08705 PF01578 Cytochrome C assembly protein FAI40_08710 PF03100 CcmE FAI40_08720 PF01578 Cytochrome C assembly protein FAI40_08745 PF00004 ATPase family associated with various cellular activities (AAA) FAI40_08745 PF16193 AAA C-terminal domain FAI40_08745 PF12002 MgsA AAA+ ATPase C terminal FAI40_08750 PF01479 S4 domain FAI40_08750 PF00849 RNA pseudouridylate synthase FAI40_08760 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase FAI40_08760 PF02542 YgbB family FAI40_08775 PF04055 Radical SAM superfamily FAI40_08780 PF00535 Glycosyl transferase family 2 FAI40_08810 PF10609 NUBPL iron-transfer P-loop NTPase FAI40_08820 PF00226 DnaJ domain FAI40_08820 PF01556 DnaJ C terminal domain FAI40_08820 PF00684 DnaJ central domain FAI40_08855 PF00444 Ribosomal protein L36 FAI40_08865 PF00795 Carbon-nitrogen hydrolase FAI40_08865 PF02540 NAD synthase FAI40_08885 PF08471 Class II vitamin B12-dependent ribonucleotide reductase FAI40_08885 PF02867 Ribonucleotide reductase, barrel domain FAI40_08895 PF00119 ATP synthase A chain FAI40_08900 PF00137 ATP synthase subunit C FAI40_08910 PF00430 ATP synthase B/B' CF(0) FAI40_08915 PF00535 Glycosyl transferase family 2 FAI40_08920 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase FAI40_08935 PF01702 Queuine tRNA-ribosyltransferase FAI40_08940 PF02547 Queuosine biosynthesis protein FAI40_08960 PF01263 Aldose 1-epimerase FAI40_08965 PF01494 FAD binding domain FAI40_08970 PF08544 GHMP kinases C terminal FAI40_08970 PF00288 GHMP kinases N terminal domain FAI40_08980 PF00920 Dehydratase family FAI40_08985 PF01081 KDPG and KHG aldolase FAI40_08995 PF01513 ATP-NAD kinase FAI40_09005 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FAI40_09005 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FAI40_09010 PF01451 Low molecular weight phosphotyrosine protein phosphatase FAI40_09025 PF02082 Transcriptional regulator FAI40_09040 PF07992 Pyridine nucleotide-disulphide oxidoreductase FAI40_09045 PF01960 ArgJ family FAI40_09055 PF07516 SecA Wing and Scaffold domain FAI40_09055 PF01043 SecA preprotein cross-linking domain FAI40_09055 PF07517 SecA DEAD-like domain FAI40_09055 PF02810 SEC-C motif FAI40_09060 PF01709 Transcriptional regulator FAI40_09065 PF02075 Crossover junction endodeoxyribonuclease RuvC FAI40_09070 PF01330 RuvA N terminal domain FAI40_09070 PF07499 RuvA, C-terminal domain FAI40_09075 PF05496 Holliday junction DNA helicase RuvB P-loop domain FAI40_09075 PF05491 RuvB C-terminal winged helix domain FAI40_09075 PF17864 RuvB AAA lid domain FAI40_09080 PF03061 Thioesterase superfamily FAI40_09085 PF01618 MotA/TolQ/ExbB proton channel family FAI40_09090 PF02472 Biopolymer transport protein ExbD/TolR FAI40_09100 PF07676 WD40-like Beta Propeller Repeat FAI40_09100 PF04052 TolB amino-terminal domain FAI40_09105 PF00691 OmpA family FAI40_09115 PF01171 PP-loop family FAI40_09120 PF17862 AAA+ lid domain FAI40_09120 PF06480 FtsH Extracellular FAI40_09120 PF01434 Peptidase family M41 FAI40_09120 PF00004 ATPase family associated with various cellular activities (AAA) FAI40_09125 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FAI40_09125 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FAI40_09125 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FAI40_09125 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FAI40_09130 PF02780 Transketolase, C-terminal domain FAI40_09130 PF00456 Transketolase, thiamine diphosphate binding domain FAI40_09130 PF02779 Transketolase, pyrimidine binding domain FAI40_09135 PF00342 Phosphoglucose isomerase FAI40_09140 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FAI40_09140 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain FAI40_09145 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase FAI40_09150 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) FAI40_09155 PF02569 Pantoate-beta-alanine ligase FAI40_09180 PF08543 Phosphomethylpyrimidine kinase FAI40_09185 PF02581 Thiamine monophosphate synthase FAI40_09190 PF02110 Hydroxyethylthiazole kinase family FAI40_09205 PF13742 OB-fold nucleic acid binding domain FAI40_09205 PF02601 Exonuclease VII, large subunit FAI40_09210 PF10150 Ribonuclease E/G family FAI40_09210 PF00575 S1 RNA binding domain FAI40_09210 PF12111 Polyribonucleotide phosphorylase C terminal FAI40_09215 PF01476 LysM domain FAI40_09215 PF01520 N-acetylmuramoyl-L-alanine amidase FAI40_09235 PF00905 Penicillin binding protein transpeptidase domain FAI40_09235 PF03717 Penicillin-binding Protein dimerisation domain FAI40_09240 PF01098 Cell cycle protein FAI40_09245 PF00205 Thiamine pyrophosphate enzyme, central domain FAI40_09245 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FAI40_09245 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FAI40_09250 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FAI40_09250 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FAI40_09250 PF00205 Thiamine pyrophosphate enzyme, central domain FAI40_09255 PF05746 DALR anticodon binding domain FAI40_09255 PF02092 Glycyl-tRNA synthetase beta subunit FAI40_09260 PF02091 Glycyl-tRNA synthetase alpha subunit FAI40_09270 PF01336 OB-fold nucleic acid binding domain FAI40_09270 PF02938 GAD domain FAI40_09270 PF00152 tRNA synthetases class II (D, K and N) FAI40_09290 PF03372 Endonuclease/Exonuclease/phosphatase family FAI40_09295 PF01521 Iron-sulphur cluster biosynthesis FAI40_09300 PF03485 Arginyl tRNA synthetase N terminal domain FAI40_09300 PF05746 DALR anticodon binding domain FAI40_09300 PF00750 tRNA synthetases class I (R) FAI40_09310 PF02416 mttA/Hcf106 family FAI40_09315 PF00902 Sec-independent protein translocase protein (TatC) FAI40_09320 PF02403 Seryl-tRNA synthetase N-terminal domain FAI40_09320 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FAI40_09345 PF00970 Oxidoreductase FAD-binding domain FAI40_09345 PF00175 Oxidoreductase NAD-binding domain FAI40_09350 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FAI40_09350 PF07992 Pyridine nucleotide-disulphide oxidoreductase FAI40_09375 PF00749 tRNA synthetases class I (E and Q), catalytic domain FAI40_09390 PF00588 SpoU rRNA Methylase family FAI40_09395 PF09190 DALR domain FAI40_09395 PF01406 tRNA synthetases class I (C) catalytic domain FAI40_09400 PF01554 MatE FAI40_09405 PF07690 Major Facilitator Superfamily FAI40_09410 PF00163 Ribosomal protein S4/S9 N-terminal domain FAI40_09410 PF01479 S4 domain FAI40_09415 PF16658 Class II release factor RF3, C-terminal domain FAI40_09415 PF00009 Elongation factor Tu GTP binding domain FAI40_09415 PF03144 Elongation factor Tu domain 2 FAI40_09425 PF00484 Carbonic anhydrase FAI40_09430 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FAI40_09430 PF01411 tRNA synthetases class II (A) FAI40_09430 PF02272 DHHA1 domain FAI40_09440 PF02899 Phage integrase, N-terminal SAM-like domain FAI40_09440 PF00589 Phage integrase family FAI40_09445 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FAI40_09450 PF02464 Competence-damaged protein FAI40_09450 PF00994 Probable molybdopterin binding domain FAI40_09455 PF00293 NUDIX domain FAI40_09460 PF02699 Preprotein translocase subunit FAI40_09465 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FAI40_09465 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FAI40_09470 PF01192 RNA polymerase Rpb6 FAI40_09475 PF02824 TGS domain FAI40_09475 PF04607 Region found in RelA / SpoT proteins FAI40_09475 PF13291 ACT domain FAI40_09480 PF01648 4'-phosphopantetheinyl transferase superfamily FAI40_09485 PF10502 Signal peptidase, peptidase S26 FAI40_09490 PF00035 Double-stranded RNA binding motif FAI40_09490 PF14622 Ribonuclease-III-like FAI40_09495 PF07650 KH domain FAI40_09495 PF01926 50S ribosome-binding GTPase FAI40_09500 PF00696 Amino acid kinase family FAI40_09505 PF01765 Ribosome recycling factor FAI40_09510 PF01255 Putative undecaprenyl diphosphate synthase FAI40_09520 PF13288 DXP reductoisomerase C-terminal domain FAI40_09520 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase FAI40_09520 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain FAI40_09525 PF02163 Peptidase family M50 FAI40_09525 PF17820 PDZ domain FAI40_09530 PF01103 Surface antigen FAI40_09530 PF07244 Surface antigen variable number repeat FAI40_09540 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD FAI40_09540 PF00132 Bacterial transferase hexapeptide (six repeats) FAI40_09545 PF07977 FabA-like domain FAI40_09550 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 FAI40_09550 PF00132 Bacterial transferase hexapeptide (six repeats) FAI40_09560 PF00468 Ribosomal protein L34 FAI40_09565 PF00825 Ribonuclease P FAI40_09570 PF01809 Putative membrane protein insertion efficiency factor FAI40_09575 PF02096 60Kd inner membrane protein FAI40_09575 PF14849 YidC periplasmic domain FAI40_09580 PF01926 50S ribosome-binding GTPase FAI40_09585 PF00696 Amino acid kinase family FAI40_09590 PF14602 Hexapeptide repeat of succinyl-transferase FAI40_09590 PF00132 Bacterial transferase hexapeptide (six repeats) FAI40_09590 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal FAI40_09595 PF07687 Peptidase dimerisation domain FAI40_09595 PF01546 Peptidase family M20/M25/M40 FAI40_09600 PF00893 Small Multidrug Resistance protein FAI40_09605 PF01416 tRNA pseudouridine synthase FAI40_09610 PF00551 Formyl transferase FAI40_09610 PF02911 Formyl transferase, C-terminal domain FAI40_09615 PF01327 Polypeptide deformylase FAI40_09620 PF00005 ABC transporter FAI40_09635 PF00571 CBS domain FAI40_09635 PF01380 SIS domain FAI40_09640 PF01612 3'-5' exonuclease FAI40_09640 PF00570 HRDC domain FAI40_09655 PF03109 ABC1 family FAI40_09660 PF00271 Helicase conserved C-terminal domain FAI40_09660 PF02151 UvrB/uvrC motif FAI40_09660 PF12344 Ultra-violet resistance protein B FAI40_09660 PF17757 UvrB interaction domain FAI40_09660 PF04851 Type III restriction enzyme, res subunit FAI40_09665 PF03449 Transcription elongation factor, N-terminal FAI40_09665 PF01272 Transcription elongation factor, GreA/GreB, C-term FAI40_09670 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain FAI40_09670 PF02951 Prokaryotic glutathione synthetase, N-terminal domain FAI40_09675 PF01209 ubiE/COQ5 methyltransferase family FAI40_09680 PF00675 Insulinase (Peptidase family M16) FAI40_09680 PF05193 Peptidase M16 inactive domain FAI40_09685 PF08335 GlnD PII-uridylyltransferase FAI40_09685 PF01966 HD domain FAI40_09690 PF01624 MutS domain I FAI40_09690 PF05192 MutS domain III FAI40_09690 PF05188 MutS domain II FAI40_09690 PF00488 MutS domain V FAI40_09690 PF05190 MutS family domain IV FAI40_09695 PF03023 Lipid II flippase MurJ FAI40_09700 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus FAI40_09700 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FAI40_09705 PF00814 Glycoprotease family FAI40_09720 PF02556 Preprotein translocase subunit SecB FAI40_09740 PF01032 FecCD transport family FAI40_09745 PF00005 ABC transporter FAI40_09750 PF00166 Chaperonin 10 Kd subunit FAI40_09755 PF00118 TCP-1/cpn60 chaperonin family FAI40_09765 PF01921 tRNA synthetases class I (K) FAI40_09770 PF03706 Lysylphosphatidylglycerol synthase TM region FAI40_09775 PF01027 Inhibitor of apoptosis-promoting Bax1 FAI40_09780 PF00037 4Fe-4S binding domain FAI40_09780 PF11953 Domain of unknown function (DUF3470) FAI40_09785 PF00953 Glycosyl transferase family 4 FAI40_09790 PF02719 Polysaccharide biosynthesis protein FAI40_09795 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FAI40_09800 PF00334 Nucleoside diphosphate kinase FAI40_09810 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FAI40_09810 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FAI40_09830 PF00117 Glutamine amidotransferase class-I FAI40_09830 PF00958 GMP synthase C terminal domain FAI40_09830 PF02540 NAD synthase FAI40_09840 PF00224 Pyruvate kinase, barrel domain FAI40_09840 PF02887 Pyruvate kinase, alpha/beta domain FAI40_09850 PF01370 NAD dependent epimerase/dehydratase family FAI40_09870 PF01593 Flavin containing amine oxidoreductase FAI40_09875 PF13249 Squalene-hopene cyclase N-terminal domain FAI40_09875 PF13243 Squalene-hopene cyclase C-terminal domain FAI40_09885 PF00318 Ribosomal protein S2 FAI40_09890 PF00889 Elongation factor TS FAI40_09895 PF11967 Recombination protein O N terminal FAI40_09895 PF02565 Recombination protein O C terminal FAI40_09900 PF00521 DNA gyrase/topoisomerase IV, subunit A FAI40_09900 PF03989 DNA gyrase C-terminal domain, beta-propeller FAI40_09905 PF13396 Phospholipase_D-nuclease N-terminal FAI40_09905 PF13091 PLD-like domain FAI40_09915 PF01078 Magnesium chelatase, subunit ChlI FAI40_09915 PF13335 Magnesium chelatase, subunit ChlI C-terminal FAI40_09920 PF02348 Cytidylyltransferase FAI40_09925 PF00701 Dihydrodipicolinate synthetase family FAI40_09930 PF01668 SmpB protein FAI40_09935 PF00313 'Cold-shock' DNA-binding domain FAI40_09940 PF17191 RecG wedge domain FAI40_09940 PF00271 Helicase conserved C-terminal domain FAI40_09940 PF00270 DEAD/DEAH box helicase FAI40_09945 PF17757 UvrB interaction domain FAI40_09945 PF02559 CarD-like/TRCF domain FAI40_09945 PF00270 DEAD/DEAH box helicase FAI40_09945 PF00271 Helicase conserved C-terminal domain FAI40_09945 PF03461 TRCF domain FAI40_09950 PF01728 FtsJ-like methyltransferase FAI40_10140 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) FAI40_10250 PF13356 Arm DNA-binding domain FAI40_10250 PF00589 Phage integrase family FAI40_10265 PF10458 Valyl tRNA synthetase tRNA binding arm FAI40_10265 PF00133 tRNA synthetases class I (I, L, M and V) FAI40_10265 PF08264 Anticodon-binding domain of tRNA FAI40_10270 PF07992 Pyridine nucleotide-disulphide oxidoreductase FAI40_10280 PF01165 Ribosomal protein S21 FAI40_10295 PF01783 Ribosomal L32p protein family FAI40_10300 PF02504 Fatty acid synthesis protein FAI40_10305 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FAI40_10305 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FAI40_10325 PF00830 Ribosomal L28 family FAI40_10330 PF14492 Elongation Factor G, domain II FAI40_10330 PF03764 Elongation factor G, domain IV FAI40_10330 PF00009 Elongation factor Tu GTP binding domain FAI40_10330 PF03144 Elongation factor Tu domain 2 FAI40_10330 PF00679 Elongation factor G C-terminus FAI40_10335 PF04127 DNA / pantothenate metabolism flavoprotein FAI40_10335 PF02441 Flavoprotein FAI40_10340 PF01209 ubiE/COQ5 methyltransferase family FAI40_10345 PF01649 Ribosomal protein S20 FAI40_10375 PF03389 MobA/MobL family FAI40_10400 PF00239 Resolvase, N terminal domain FAI40_10400 PF02796 Helix-turn-helix domain of resolvase FAI40_10420 PF05973 Phage derived protein Gp49-like (DUF891) FAI40_10435 PF13614 AAA domain FAI40_10435 PF00376 MerR family regulatory protein FAI40_10480 PF03389 MobA/MobL family