locus-tag	class	description
JGUZn3_00010	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
JGUZn3_00020	COG0358	DNA primase activity
JGUZn3_00040	COG0505	Belongs to the CarA family
JGUZn3_00060	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
JGUZn3_00070	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
JGUZn3_00100	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
JGUZn3_00120	COG0793	Belongs to the peptidase S41A family
JGUZn3_00130	COG1051	belongs to the nudix hydrolase family
JGUZn3_00140	COG2814	Major facilitator Superfamily
JGUZn3_00150	COG1566	PFAM secretion protein HlyD family protein
JGUZn3_00160	COG1132	(ABC) transporter
JGUZn3_00170	COG0617	tRNA 3'-terminal CCA addition
JGUZn3_00190	COG0714	Associated with various cellular activities
JGUZn3_00230	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
JGUZn3_00250	COG2189	Belongs to the N(4) N(6)-methyltransferase family
JGUZn3_00260	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
JGUZn3_00290	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JGUZn3_00320	COG5487	UPF0391 membrane protein
JGUZn3_00340	COG0203	ribosomal protein L17
JGUZn3_00350	COG0202	RNA polymerase activity
JGUZn3_00360	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
JGUZn3_00370	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
JGUZn3_00380	COG0563	adenylate kinase activity
JGUZn3_00400	COG0200	Binds to the 23S rRNA
JGUZn3_00410	COG1841	ribosomal large subunit assembly
JGUZn3_00420	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
JGUZn3_00430	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
JGUZn3_00440	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
JGUZn3_00450	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
JGUZn3_00460	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
JGUZn3_00470	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
JGUZn3_00480	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
JGUZn3_00490	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
JGUZn3_00500	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
JGUZn3_00510	COG0255	Belongs to the universal ribosomal protein uL29 family
JGUZn3_00520	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
JGUZn3_00530	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
JGUZn3_00540	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
JGUZn3_00550	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
JGUZn3_00560	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
JGUZn3_00570	COG0089	rRNA binding
JGUZn3_00580	COG0088	Forms part of the polypeptide exit tunnel
JGUZn3_00590	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
JGUZn3_00600	COG0051	transcription antitermination factor activity, RNA binding
JGUZn3_00610	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
JGUZn3_00620	COG0049	tRNA binding
JGUZn3_00630	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
JGUZn3_00640	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
JGUZn3_00650	COG0085	RNA polymerase activity
JGUZn3_00660	COG0222	ribosome binding
JGUZn3_00670	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
JGUZn3_00680	COG0081	regulation of translation
JGUZn3_00690	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
JGUZn3_00720	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
JGUZn3_00730	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
JGUZn3_00760	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
JGUZn3_00800	COG0328	RNA-DNA hybrid ribonuclease activity
JGUZn3_00810	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
JGUZn3_00820	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
JGUZn3_00880	COG0287	Prephenate dehydrogenase
JGUZn3_00880	COG1605	Chorismate mutase
JGUZn3_00910	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
JGUZn3_00920	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
JGUZn3_00930	COG0142	geranyltranstransferase activity
JGUZn3_00950	COG0583	DNA-binding transcription factor activity
JGUZn3_00960	COG0655	NAD(P)H dehydrogenase (quinone) activity
JGUZn3_01030	COG0518	GMP synthase (glutamine-hydrolyzing) activity
JGUZn3_01030	COG0519	Catalyzes the synthesis of GMP from XMP
JGUZn3_01060	COG1956	GAF domain-containing protein
JGUZn3_01100	COG1522	sequence-specific DNA binding
JGUZn3_01110	COG0492	ferredoxin-NADP+ reductase activity
JGUZn3_01120	COG0583	DNA-binding transcription factor activity
JGUZn3_01130	COG0662	Cupin 2, conserved barrel domain protein
JGUZn3_01130	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
JGUZn3_01150	COG0588	phosphoglycerate mutase activity
JGUZn3_01160	COG0776	regulation of translation
JGUZn3_01170	COG0616	signal peptide processing
JGUZn3_01190	COG0246	Mannitol dehydrogenase
JGUZn3_01200	COG1070	Carbohydrate kinase
JGUZn3_01220	COG4221	oxidoreductase activity
JGUZn3_01230	COG0604	alcohol dehydrogenase
JGUZn3_01390	COG1902	pentaerythritol trinitrate reductase activity
JGUZn3_01390	COG0446	pyridine nucleotide-disulphide oxidoreductase
JGUZn3_01420	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
JGUZn3_01460	COG0261	This protein binds to 23S rRNA in the presence of protein L20
JGUZn3_01470	COG0211	Belongs to the bacterial ribosomal protein bL27 family
JGUZn3_01480	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
JGUZn3_01490	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
JGUZn3_01510	COG3750	Belongs to the UPF0335 family
JGUZn3_01520	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
JGUZn3_01540	COG0723	plastoquinol--plastocyanin reductase activity
JGUZn3_01550	COG0657	acetylesterase activity
JGUZn3_01560	COG0012	GTP binding
JGUZn3_01570	COG0275	rRNA processing
JGUZn3_01600	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
JGUZn3_01620	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
JGUZn3_01630	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
JGUZn3_01650	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
JGUZn3_01660	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
JGUZn3_01670	COG0812	UDP-N-acetylmuramate dehydrogenase activity
JGUZn3_01680	COG1181	Belongs to the D-alanine--D-alanine ligase family
JGUZn3_01690	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
JGUZn3_01700	COG0849	cell division
JGUZn3_01720	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
JGUZn3_01730	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
JGUZn3_01740	COG0497	DNA recombination
JGUZn3_01750	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
JGUZn3_01760	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
JGUZn3_01780	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
JGUZn3_01790	COG0066	3-isopropylmalate dehydratase activity
JGUZn3_01800	COG0473	3-isopropylmalate dehydrogenase activity
JGUZn3_01880	COG0542	response to heat
JGUZn3_01900	COG1127	ABC transporter
JGUZn3_01910	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
JGUZn3_01920	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
JGUZn3_01940	COG1454	alcohol dehydrogenase
JGUZn3_01940	COG1012	belongs to the aldehyde dehydrogenase family
JGUZn3_01960	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
JGUZn3_01960	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
JGUZn3_02050	COG3119	arylsulfatase activity
JGUZn3_02100	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
JGUZn3_02110	COG0573	inorganic phosphate transmembrane transporter activity
JGUZn3_02130	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
JGUZn3_02150	COG0745	RESPONSE REGULATOR receiver
JGUZn3_02160	COG5002	protein histidine kinase activity
JGUZn3_02170	COG3265	gluconokinase activity
JGUZn3_02180	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
JGUZn3_02190	COG0363	glucosamine-6-phosphate deaminase activity
JGUZn3_02200	COG0561	phosphatase activity
JGUZn3_02210	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
JGUZn3_02220	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
JGUZn3_02230	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
JGUZn3_02250	COG1472	Belongs to the glycosyl hydrolase 3 family
JGUZn3_02300	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
JGUZn3_02310	COG0025	NhaP-type Na H and K H
JGUZn3_02340	COG0668	transmembrane transport
JGUZn3_02360	COG1696	Membrane protein involved in D-alanine export
JGUZn3_02380	COG2223	nitrite transmembrane transporter activity
JGUZn3_02390	COG2814	Major facilitator Superfamily
JGUZn3_02410	COG1612	heme a metabolic process
JGUZn3_02430	COG2814	Major facilitator Superfamily
JGUZn3_02490	COG0753	catalase activity
JGUZn3_02500	COG1194	a g-specific adenine glycosylase
JGUZn3_02520	COG0815	Transfers the fatty acyl group on membrane lipoproteins
JGUZn3_02550	COG4957	zinc ion binding
JGUZn3_02590	COG0778	Nitroreductase
JGUZn3_02620	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
JGUZn3_02640	COG1573	uracil-dna glycosylase
JGUZn3_02660	COG0667	Aldo Keto reductase
JGUZn3_02670	COG3189	MarR family transcriptional regulator
JGUZn3_02680	COG0390	transport system, permease component
JGUZn3_02690	COG1136	(ABC) transporter
JGUZn3_02700	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
JGUZn3_02720	COG1513	Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide
JGUZn3_02730	COG0521	Mo-molybdopterin cofactor biosynthetic process
JGUZn3_02820	COG0667	Aldo Keto reductase
JGUZn3_02830	COG1420	regulation of RNA biosynthetic process
JGUZn3_02840	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
JGUZn3_02850	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
JGUZn3_02880	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
JGUZn3_02880	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
JGUZn3_02890	COG0307	riboflavin synthase, alpha
JGUZn3_02900	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
JGUZn3_02900	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
JGUZn3_02910	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
JGUZn3_03320	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
JGUZn3_03360	COG1396	sequence-specific DNA binding
JGUZn3_03400	COG0582	viral genome integration into host DNA
JGUZn3_03440	COG1573	uracil-dna glycosylase
JGUZn3_03450	COG3961	Belongs to the TPP enzyme family
JGUZn3_03530	COG2244	polysaccharide biosynthetic process
JGUZn3_03550	COG0318	PFAM AMP-dependent synthetase and ligase
JGUZn3_03560	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JGUZn3_03570	COG0156	8-amino-7-oxononanoate synthase activity
JGUZn3_03600	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
JGUZn3_03650	COG0438	transferase activity, transferring glycosyl groups
JGUZn3_03720	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
JGUZn3_03730	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
JGUZn3_03740	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JGUZn3_03760	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
JGUZn3_03820	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
JGUZn3_03850	COG2608	mercury ion transmembrane transporter activity
JGUZn3_03870	COG0135	phosphoribosylanthranilate isomerase activity
JGUZn3_03880	COG0284	orotidine-5'-phosphate decarboxylase activity
JGUZn3_03930	COG1301	dicarboxylic acid transport
JGUZn3_03940	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
JGUZn3_03970	COG0435	Glutathione S-transferase
JGUZn3_04050	COG0531	amino acid
JGUZn3_04060	COG0778	Nitroreductase
JGUZn3_04090	COG1657	PFAM Prenyltransferase squalene oxidase
JGUZn3_04100	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
JGUZn3_04110	COG1562	ergosterol biosynthetic process
JGUZn3_04120	COG1562	ergosterol biosynthetic process
JGUZn3_04130	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
JGUZn3_04150	COG0287	Prephenate dehydrogenase
JGUZn3_04170	COG0469	pyruvate kinase activity
JGUZn3_04200	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
JGUZn3_04250	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
JGUZn3_04260	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
JGUZn3_04280	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
JGUZn3_04290	COG0508	dehydrogenase complex catalyzes the overall conversion of
JGUZn3_04320	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
JGUZn3_04340	COG1396	sequence-specific DNA binding
JGUZn3_04360	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
JGUZn3_04400	COG2983	Belongs to the UPF0260 family
JGUZn3_04430	COG0814	amino acid
JGUZn3_04470	COG1570	exodeoxyribonuclease VII activity
JGUZn3_04510	COG1185	polyribonucleotide nucleotidyltransferase activity
JGUZn3_04520	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
JGUZn3_04530	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
JGUZn3_04540	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
JGUZn3_04560	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
JGUZn3_04560	COG3008	intermembrane lipid transfer
JGUZn3_04580	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
JGUZn3_04590	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
JGUZn3_04590	COG5373	membrane
JGUZn3_04620	COG0779	Required for maturation of 30S ribosomal subunits
JGUZn3_04630	COG2259	Doxx family
JGUZn3_04640	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
JGUZn3_04650	COG4133	protoheme IX ABC transporter activity
JGUZn3_04660	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
JGUZn3_04710	COG1902	pentaerythritol trinitrate reductase activity
JGUZn3_04720	COG1506	peptidase
JGUZn3_04720	COG4946	Tricorn protease homolog
JGUZn3_04720	COG0823	Involved in the tonB-independent uptake of proteins
JGUZn3_04740	COG2814	Major facilitator Superfamily
JGUZn3_04790	COG0590	tRNA wobble adenosine to inosine editing
JGUZn3_04810	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
JGUZn3_04820	COG1187	pseudouridine synthase activity
JGUZn3_04830	COG0742	ribosomal rna small subunit methyltransferase
JGUZn3_04850	COG0564	pseudouridine synthase activity
JGUZn3_04860	COG0463	Glycosyl transferase, family 2
JGUZn3_04870	COG1091	dTDP-4-dehydrorhamnose reductase activity
JGUZn3_04890	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
JGUZn3_04950	COG0357	Ribosomal RNA small subunit methyltransferase G
JGUZn3_04960	COG0445	tRNA wobble uridine modification
JGUZn3_04970	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
JGUZn3_04980	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
JGUZn3_04990	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
JGUZn3_05000	COG0598	Magnesium transport protein CorA
JGUZn3_05020	COG0133	tryptophan synthase activity
JGUZn3_05030	COG0159	tryptophan synthase activity
JGUZn3_05040	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
JGUZn3_05050	COG0285	dihydrofolate synthase activity
JGUZn3_05060	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
JGUZn3_05080	COG1505	serine-type exopeptidase activity
JGUZn3_05090	COG4774	siderophore transport
JGUZn3_05130	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
JGUZn3_05130	COG2146	nitrite reductase [NAD(P)H] activity
JGUZn3_05140	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
JGUZn3_05140	COG1648	precorrin-2 dehydrogenase activity
JGUZn3_05180	COG3104	oligopeptide transport
JGUZn3_05210	COG0356	it plays a direct role in the translocation of protons across the membrane
JGUZn3_05220	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
JGUZn3_05230	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
JGUZn3_05240	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
JGUZn3_05250	COG0463	Glycosyl transferase, family 2
JGUZn3_05260	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
JGUZn3_05280	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
JGUZn3_05290	COG5424	Ring cyclization and eight-electron oxidation of 3a-(2- amino-2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline- 7,9-dicarboxylic-acid to PQQ
JGUZn3_05310	COG0535	radical SAM domain protein
JGUZn3_05350	COG0138	bifunctional purine biosynthesis protein purh
JGUZn3_05360	COG1660	Displays ATPase and GTPase activities
JGUZn3_05380	COG1120	ATPase activity
JGUZn3_05470	COG3047	cAMP biosynthetic process
JGUZn3_05480	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
JGUZn3_05490	COG0642	Histidine kinase
JGUZn3_05500	COG0745	RESPONSE REGULATOR receiver
JGUZn3_05510	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
JGUZn3_05520	COG0443	Heat shock 70 kDa protein
JGUZn3_05530	COG0484	heat shock protein binding
JGUZn3_05540	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
JGUZn3_05550	COG2131	deaminase
JGUZn3_05570	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
JGUZn3_05580	COG0220	tRNA (guanine-N7-)-methyltransferase activity
JGUZn3_05600	COG0305	Participates in initiation and elongation during chromosome replication
JGUZn3_05610	COG2942	2-epimerase
JGUZn3_05620	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
JGUZn3_05620	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
JGUZn3_05630	COG0194	GDP metabolic process
JGUZn3_05650	COG0424	maF-like protein
JGUZn3_05660	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
JGUZn3_05670	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
JGUZn3_05680	COG1981	membrane
JGUZn3_05740	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
JGUZn3_05750	COG0492	ferredoxin-NADP+ reductase activity
JGUZn3_05790	COG0697	spore germination
JGUZn3_05850	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
JGUZn3_05880	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
JGUZn3_05890	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
JGUZn3_05900	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
JGUZn3_05910	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
JGUZn3_05920	COG0355	proton-transporting ATP synthase activity, rotational mechanism
JGUZn3_05930	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
JGUZn3_05940	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
JGUZn3_05980	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JGUZn3_05990	COG1217	gtp-binding protein TYPA
JGUZn3_06010	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JGUZn3_06030	COG0492	ferredoxin-NADP+ reductase activity
JGUZn3_06040	COG0038	chloride channel
JGUZn3_06050	COG1914	H( )-stimulated, divalent metal cation uptake system
JGUZn3_06060	COG0802	atpase or kinase
JGUZn3_06080	COG1074	ATP-dependent DNA helicase activity
JGUZn3_06100	COG3394	polysaccharide catabolic process
JGUZn3_06110	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
JGUZn3_06140	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
JGUZn3_06150	COG1253	flavin adenine dinucleotide binding
JGUZn3_06190	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
JGUZn3_06210	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
JGUZn3_06220	COG1238	metal cluster binding
JGUZn3_06230	COG2223	nitrite transmembrane transporter activity
JGUZn3_06260	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
JGUZn3_06280	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
JGUZn3_06290	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
JGUZn3_06340	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
JGUZn3_06350	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
JGUZn3_06360	COG1797	cobyrinic acid a,c-diamide synthase activity
JGUZn3_06370	COG1903	Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A
JGUZn3_06510	COG1492	cobalamin metabolic process
JGUZn3_06540	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JGUZn3_06550	COG1120	ATPase activity
JGUZn3_06590	COG0778	Nitroreductase
JGUZn3_06600	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
JGUZn3_06640	COG0513	Belongs to the DEAD box helicase family
JGUZn3_06670	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
JGUZn3_06680	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
JGUZn3_06690	COG0552	protein localization to endoplasmic reticulum
JGUZn3_06700	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JGUZn3_06720	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
JGUZn3_06730	COG0126	phosphoglycerate kinase activity
JGUZn3_06760	COG0156	8-amino-7-oxononanoate synthase activity
JGUZn3_06780	COG0405	Gamma-glutamyltransferase
JGUZn3_06790	COG0753	catalase activity
JGUZn3_06860	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JGUZn3_06910	COG1877	trehalose-phosphatase activity
JGUZn3_06930	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
JGUZn3_06970	COG1216	Glycosyl transferase, family 2
JGUZn3_07000	COG3754	Rhamnan synthesis protein F
JGUZn3_07070	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
JGUZn3_07110	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
JGUZn3_07120	COG0588	phosphoglycerate mutase activity
JGUZn3_07130	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
JGUZn3_07140	COG0193	aminoacyl-tRNA hydrolase activity
JGUZn3_07150	COG0012	GTP binding
JGUZn3_07160	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
JGUZn3_07170	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
JGUZn3_07180	COG0799	negative regulation of ribosome biogenesis
JGUZn3_07190	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
JGUZn3_07220	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JGUZn3_07240	COG0783	Belongs to the Dps family
JGUZn3_07360	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
JGUZn3_07400	COG1294	oxidase, subunit
JGUZn3_07410	COG1271	oxidase subunit
JGUZn3_07440	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JGUZn3_07470	COG0735	belongs to the Fur family
JGUZn3_07500	COG1136	(ABC) transporter
JGUZn3_07590	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
JGUZn3_07630	COG0085	RNA polymerase activity
JGUZn3_07660	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
JGUZn3_07680	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
JGUZn3_07710	COG0832	Belongs to the urease beta subunit family
JGUZn3_07710	COG0831	urea catabolic process
JGUZn3_07720	COG0804	urea catabolic process
JGUZn3_07730	COG0243	molybdopterin cofactor binding
JGUZn3_07740	COG2755	lipolytic protein G-D-S-L family
JGUZn3_07740	COG0657	acetylesterase activity
JGUZn3_07810	COG0438	transferase activity, transferring glycosyl groups
JGUZn3_07810	COG1216	Glycosyl transferase, family 2
JGUZn3_07820	COG0494	nUDIX hydrolase
JGUZn3_07830	COG1012	belongs to the aldehyde dehydrogenase family
JGUZn3_07860	COG0602	queuosine metabolic process
JGUZn3_07870	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
JGUZn3_07900	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
JGUZn3_07920	COG3572	ergothioneine biosynthetic process
JGUZn3_07930	COG0416	fatty acid biosynthetic process
JGUZn3_07990	COG1538	Outer membrane efflux protein
JGUZn3_08000	COG0531	amino acid
JGUZn3_08010	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
JGUZn3_08020	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
JGUZn3_08050	COG1560	Kdo2-lipid A biosynthetic process
JGUZn3_08060	COG1663	tetraacyldisaccharide 4'-kinase activity
JGUZn3_08070	COG1519	Transferase
JGUZn3_08080	COG3957	D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase
JGUZn3_08110	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
JGUZn3_08130	COG0259	pyridoxamine-phosphate oxidase activity
JGUZn3_08140	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
JGUZn3_08150	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
JGUZn3_08180	COG0673	inositol 2-dehydrogenase activity
JGUZn3_08190	COG1764	response to oxidative stress
JGUZn3_08200	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
JGUZn3_08290	COG1566	PFAM secretion protein HlyD family protein
JGUZn3_08320	COG0302	gtp cyclohydrolase
JGUZn3_08330	COG2967	ApaG domain
JGUZn3_08400	COG0019	diaminopimelate decarboxylase activity
JGUZn3_08420	COG1295	ribonuclease BN
JGUZn3_08430	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
JGUZn3_08440	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
JGUZn3_08450	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
JGUZn3_08470	COG0511	ligase activity, forming carbon-carbon bonds
JGUZn3_08480	COG0439	Biotin carboxylase
JGUZn3_08490	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
JGUZn3_08530	COG0628	permease
JGUZn3_08540	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
JGUZn3_08570	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
JGUZn3_08590	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
JGUZn3_08620	COG0531	amino acid
JGUZn3_08630	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JGUZn3_08660	COG2610	gluconate transmembrane transporter activity
JGUZn3_08670	COG1715	Restriction endonuclease
JGUZn3_08680	COG0826	peptidase U32
JGUZn3_08700	COG0051	transcription antitermination factor activity, RNA binding
JGUZn3_08750	COG0495	leucyl-tRNA aminoacylation
JGUZn3_08770	COG0049	tRNA binding
JGUZn3_08820	COG0635	Involved in the biosynthesis of porphyrin-containing compound
JGUZn3_08830	COG3158	transport of potassium into the cell
JGUZn3_08840	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
JGUZn3_08860	COG0719	Fe-S assembly protein
JGUZn3_08880	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
JGUZn3_08880	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
JGUZn3_08890	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
JGUZn3_08910	COG0438	transferase activity, transferring glycosyl groups
JGUZn3_08920	COG0837	glucose binding
JGUZn3_08970	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
JGUZn3_08980	COG2945	thiolester hydrolase activity
JGUZn3_09000	COG1104	cysteine desulfurase activity
JGUZn3_09010	COG1104	cysteine desulfurase activity
JGUZn3_09030	COG0482	sulfurtransferase activity
JGUZn3_09040	COG0482	sulfurtransferase activity
JGUZn3_09070	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
JGUZn3_09090	COG0523	cobalamin synthesis protein
JGUZn3_09140	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
JGUZn3_09150	COG1230	cation diffusion facilitator family transporter
JGUZn3_09180	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
JGUZn3_09190	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
JGUZn3_09200	COG0071	Belongs to the small heat shock protein (HSP20) family
JGUZn3_09220	COG4974	Belongs to the 'phage' integrase family
JGUZn3_09320	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
JGUZn3_09330	COG0776	regulation of translation
JGUZn3_09340	COG0004	ammonium transporteR
JGUZn3_09350	COG1045	serine acetyltransferase
JGUZn3_09360	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JGUZn3_09490	COG2181	nitrate reductase activity
JGUZn3_09500	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
JGUZn3_09510	COG1140	nitrate reductase beta subunit
JGUZn3_09520	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
JGUZn3_09530	COG0531	amino acid
JGUZn3_09560	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
JGUZn3_09570	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
JGUZn3_09620	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
JGUZn3_09630	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
JGUZn3_09650	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
JGUZn3_09670	COG0140	phosphoribosyl-ATP diphosphatase activity
JGUZn3_09690	COG1410	methionine synthase
JGUZn3_09690	COG0646	methionine synthase
JGUZn3_09710	COG2274	protein secretion by the type I secretion system
JGUZn3_09790	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
JGUZn3_09810	COG0488	(ABC) transporter
JGUZn3_09830	COG0492	ferredoxin-NADP+ reductase activity
JGUZn3_09880	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
JGUZn3_09900	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
JGUZn3_09900	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
JGUZn3_09910	COG0343	queuine tRNA-ribosyltransferase activity
JGUZn3_09920	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
JGUZn3_09950	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
JGUZn3_09950	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
JGUZn3_10020	COG1351	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NAD(P)H and FADH(2) as the reductant
JGUZn3_10050	COG0489	protein tyrosine kinase activity
JGUZn3_10060	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
JGUZn3_10080	COG0202	RNA polymerase activity
JGUZn3_10150	COG2835	tetraacyldisaccharide 4'-kinase activity
JGUZn3_10170	COG3118	belongs to the thioredoxin family
JGUZn3_10210	COG1028	Short-chain dehydrogenase reductase Sdr
JGUZn3_10300	COG1509	lysine 2,3-aminomutase activity
JGUZn3_10320	COG0629	single-stranded DNA binding
JGUZn3_10390	COG1032	radical SAM domain protein
JGUZn3_10660	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
JGUZn3_10680	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
JGUZn3_10800	COG0697	spore germination
JGUZn3_10810	COG0445	tRNA wobble uridine modification
JGUZn3_10820	COG2186	Transcriptional regulator
JGUZn3_10830	COG3734	2-keto-3-deoxy-galactonokinase
JGUZn3_10840	COG0800	Aldolase
JGUZn3_10850	COG4948	Mandelate Racemase Muconate Lactonizing
JGUZn3_10860	COG3256	nitric oxide reductase
JGUZn3_10930	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
JGUZn3_10950	COG1335	isochorismatase
JGUZn3_10960	COG0326	Molecular chaperone. Has ATPase activity
JGUZn3_10980	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
JGUZn3_11020	COG0667	Aldo Keto reductase
JGUZn3_11040	COG0667	Aldo Keto reductase
JGUZn3_11090	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
JGUZn3_11140	COG3145	DNA-N1-methyladenine dioxygenase activity
JGUZn3_11220	COG0659	secondary active sulfate transmembrane transporter activity
JGUZn3_11260	COG3265	gluconokinase activity
JGUZn3_11270	COG0246	Mannitol dehydrogenase
JGUZn3_11280	COG3131	Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
JGUZn3_11300	COG0560	Phosphoserine phosphatase
JGUZn3_11320	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
JGUZn3_11330	COG0028	Belongs to the TPP enzyme family
JGUZn3_11340	COG0440	acetolactate synthase activity
JGUZn3_11350	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
JGUZn3_11450	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
JGUZn3_11480	COG4993	Dehydrogenase
JGUZn3_11490	COG0291	Belongs to the bacterial ribosomal protein bL35 family
JGUZn3_11500	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
JGUZn3_11510	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
JGUZn3_11520	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JGUZn3_11520	COG0072	phenylalanine-tRNA ligase activity
JGUZn3_11530	COG0481	GTPase activity
JGUZn3_11560	COG0481	GTPase activity
JGUZn3_11610	COG0500	methyltransferase
JGUZn3_11630	COG0842	Transport permease protein
JGUZn3_11640	COG1129	ABC transporter
JGUZn3_11640	COG0842	Transport permease protein
JGUZn3_11650	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JGUZn3_11660	COG1538	Outer membrane efflux protein
JGUZn3_11680	COG0582	viral genome integration into host DNA
JGUZn3_11740	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
JGUZn3_11750	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
JGUZn3_11860	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
JGUZn3_11910	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
JGUZn3_12130	COG2308	Evidence 4 Homologs of previously reported genes of
JGUZn3_12190	COG4115	mRNA cleavage
JGUZn3_12520	COG0477	Major facilitator Superfamily
JGUZn3_12560	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
JGUZn3_12580	COG0556	nucleotide-excision repair
JGUZn3_12590	COG0649	NAD binding
JGUZn3_12630	COG0189	ligase activity
JGUZn3_12640	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JGUZn3_12670	COG2226	methyltransferase
JGUZn3_12690	COG0109	protoheme IX farnesyltransferase activity
JGUZn3_12720	COG0312	modulator of DNA gyrase
JGUZn3_12730	COG0612	Peptidase, M16
JGUZn3_12770	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
JGUZn3_12780	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
JGUZn3_12800	COG0386	Belongs to the glutathione peroxidase family
JGUZn3_12820	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
JGUZn3_12840	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
JGUZn3_12850	COG0181	hydroxymethylbilane synthase activity
JGUZn3_12880	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
JGUZn3_12900	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
JGUZn3_12920	COG1858	cytochrome C peroxidase
JGUZn3_12950	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JGUZn3_12960	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
JGUZn3_12980	COG0408	coproporphyrinogen oxidase activity
JGUZn3_13000	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
JGUZn3_13010	COG2857	Cytochrome c1
JGUZn3_13020	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
JGUZn3_13030	COG0412	Dienelactone hydrolase
JGUZn3_13040	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
JGUZn3_13050	COG0459	protein refolding
JGUZn3_13060	COG1278	Cold shock
JGUZn3_13080	COG2814	Major facilitator Superfamily
JGUZn3_13120	COG0670	Belongs to the BI1 family
JGUZn3_13150	COG1845	cytochrome c oxidase, subunit III
JGUZn3_13160	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
JGUZn3_13200	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
JGUZn3_13300	COG0488	(ABC) transporter
JGUZn3_13310	COG0105	UTP biosynthetic process
JGUZn3_13320	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
JGUZn3_13350	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
JGUZn3_13360	COG0248	Ppx GppA phosphatase
JGUZn3_13380	COG0133	tryptophan synthase activity
JGUZn3_13400	COG0019	diaminopimelate decarboxylase activity
JGUZn3_13410	COG0165	Argininosuccinate lyase
JGUZn3_13460	COG2841	Protein conserved in bacteria
JGUZn3_13480	COG0085	RNA polymerase activity
JGUZn3_13500	COG0254	rRNA binding
JGUZn3_13510	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
JGUZn3_13520	COG1970	mechanosensitive ion channel activity
JGUZn3_13550	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
JGUZn3_13590	COG0488	(ABC) transporter
JGUZn3_13600	COG0784	Response regulator, receiver
JGUZn3_13650	COG4988	ABC transporter
JGUZn3_13660	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
JGUZn3_13680	COG3386	PFAM SMP-30 Gluconolaconase
JGUZn3_13690	COG0138	bifunctional purine biosynthesis protein purh
JGUZn3_13740	COG0052	Belongs to the universal ribosomal protein uS2 family
JGUZn3_13750	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
JGUZn3_13760	COG1381	Involved in DNA repair and RecF pathway recombination
JGUZn3_13780	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
JGUZn3_13790	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
JGUZn3_13800	COG0154	amidase activity
JGUZn3_13810	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
JGUZn3_13850	COG3512	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
JGUZn3_13890	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
JGUZn3_13960	COG0582	viral genome integration into host DNA
JGUZn3_14000	COG3546	catalase activity
JGUZn3_14050	COG0697	spore germination
JGUZn3_14060	COG2070	2-Nitropropane dioxygenase
JGUZn3_14070	COG0583	DNA-binding transcription factor activity
JGUZn3_14080	COG0583	DNA-binding transcription factor activity
JGUZn3_14270	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
JGUZn3_14290	COG0424	maF-like protein
JGUZn3_14300	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
JGUZn3_14310	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
JGUZn3_14330	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
JGUZn3_14340	COG0717	Belongs to the dCTP deaminase family
JGUZn3_14370	COG0473	3-isopropylmalate dehydrogenase activity
JGUZn3_14400	COG1247	-acetyltransferase
JGUZn3_14410	COG2264	protein methyltransferase activity
JGUZn3_14420	COG0210	DNA helicase
JGUZn3_14430	COG2003	Belongs to the UPF0758 family
JGUZn3_14450	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
JGUZn3_14460	COG0237	dephospho-CoA kinase activity
JGUZn3_14470	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
JGUZn3_14480	COG1278	Cold shock
JGUZn3_14500	COG0215	cysteine-tRNA ligase activity
JGUZn3_14520	COG1253	flavin adenine dinucleotide binding
JGUZn3_14540	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
JGUZn3_14550	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
JGUZn3_14580	COG0667	Aldo Keto reductase
JGUZn3_14600	COG0247	lactate metabolic process
JGUZn3_14600	COG0277	FAD linked oxidase domain protein
JGUZn3_14620	COG0248	Ppx GppA phosphatase
JGUZn3_14630	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
JGUZn3_14650	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
JGUZn3_14650	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
JGUZn3_14690	COG0745	RESPONSE REGULATOR receiver
JGUZn3_14720	COG0322	excinuclease ABC activity
JGUZn3_14750	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
JGUZn3_14760	COG0314	molybdopterin synthase activity
JGUZn3_14770	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
JGUZn3_14780	COG0156	8-amino-7-oxononanoate synthase activity
JGUZn3_14800	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
JGUZn3_14800	COG4106	trans-aconitate 2-methyltransferase activity
JGUZn3_14810	COG1763	Mo-molybdopterin cofactor biosynthetic process
JGUZn3_14820	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
JGUZn3_14830	COG0303	'Molybdopterin
JGUZn3_14840	COG0267	Belongs to the bacterial ribosomal protein bL33 family
JGUZn3_14860	COG0148	phosphopyruvate hydratase activity
JGUZn3_14870	COG2877	3-deoxy-8-phosphooctulonate synthase activity
JGUZn3_14880	COG0504	CTP synthase activity
JGUZn3_14900	COG0149	triose-phosphate isomerase activity
JGUZn3_14920	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
JGUZn3_14940	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
JGUZn3_14950	COG0134	indole-3-glycerol-phosphate synthase activity
JGUZn3_14960	COG0315	cyclic pyranopterin monophosphate synthase activity
JGUZn3_14970	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
JGUZn3_15000	COG1546	Belongs to the CinA family
JGUZn3_15000	COG1058	Belongs to the CinA family
JGUZn3_15010	COG1196	nuclear chromosome segregation
JGUZn3_15010	COG0739	heme binding
JGUZn3_15010	COG0741	lytic transglycosylase activity
JGUZn3_15020	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
JGUZn3_15030	COG1335	isochorismatase
JGUZn3_15050	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
JGUZn3_15080	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
JGUZn3_15090	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
JGUZn3_15110	COG0047	phosphoribosylformylglycinamidine synthase activity
JGUZn3_15120	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
JGUZn3_15140	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
JGUZn3_15160	COG0792	nuclease activity
JGUZn3_15190	COG0628	permease
JGUZn3_15200	COG0626	cystathionine gamma-synthase activity
JGUZn3_15210	COG0606	chelatase, subunit chli
JGUZn3_15220	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
JGUZn3_15230	COG0483	inositol monophosphate 1-phosphatase activity
JGUZn3_15240	COG3474	cytochrome
JGUZn3_15260	COG1605	Chorismate mutase
JGUZn3_15260	COG0077	Prephenate dehydratase
JGUZn3_15270	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
JGUZn3_15280	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
JGUZn3_15300	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
JGUZn3_15310	COG3957	D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase
JGUZn3_15330	COG1573	uracil-dna glycosylase
JGUZn3_15350	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
JGUZn3_15360	COG1758	RNA polymerase activity
JGUZn3_15370	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
JGUZn3_15380	COG0736	holo-[acyl-carrier-protein] synthase activity
JGUZn3_15390	COG0681	Belongs to the peptidase S26 family
JGUZn3_15410	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
JGUZn3_15420	COG0528	UMP kinase activity
JGUZn3_15430	COG0233	cytoplasmic translational termination
JGUZn3_15460	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
JGUZn3_15470	COG0750	zinc metalloprotease
JGUZn3_15480	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
JGUZn3_15500	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
JGUZn3_15510	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
JGUZn3_15520	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
JGUZn3_15530	COG3494	Protein of unknown function (DUF1009)
JGUZn3_15540	COG0346	lactoylglutathione lyase activity
JGUZn3_15560	COG0230	Belongs to the bacterial ribosomal protein bL34 family
JGUZn3_15570	COG0594	ribonuclease P activity
JGUZn3_15580	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
JGUZn3_15590	COG0706	membrane insertase activity
JGUZn3_15600	COG0218	Necessary for normal cell division and for the maintenance of normal septation
JGUZn3_15610	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
JGUZn3_15620	COG2171	N-acyltransferase activity
JGUZn3_15630	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
JGUZn3_15650	COG0101	tRNA pseudouridine synthase activity
JGUZn3_15660	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
JGUZn3_15670	COG0242	peptide deformylase activity
JGUZn3_15680	COG0071	Belongs to the small heat shock protein (HSP20) family
JGUZn3_15710	COG1137	ATPase activity
JGUZn3_15740	COG0517	IMP dehydrogenase activity
JGUZn3_15740	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
JGUZn3_15950	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
JGUZn3_15960	COG2813	Specifically methylates the guanine in position
JGUZn3_15960	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
JGUZn3_16000	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
JGUZn3_16010	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
JGUZn3_16020	COG0354	folic acid binding
JGUZn3_16040	COG0438	transferase activity, transferring glycosyl groups
JGUZn3_16100	COG1160	GTP binding
JGUZn3_16110	COG2223	nitrite transmembrane transporter activity
JGUZn3_16140	COG0228	four-way junction DNA binding
JGUZn3_16150	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
JGUZn3_16160	COG0336	Belongs to the RNA methyltransferase TrmD family
JGUZn3_16170	COG0335	large ribosomal subunit rRNA binding
JGUZn3_16180	COG0828	Belongs to the bacterial ribosomal protein bS21 family
JGUZn3_16190	COG1846	Transcriptional regulator
JGUZn3_16200	COG0745	RESPONSE REGULATOR receiver
JGUZn3_16240	COG0333	Belongs to the bacterial ribosomal protein bL32 family
JGUZn3_16250	COG0416	fatty acid biosynthetic process
JGUZn3_16260	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
JGUZn3_16270	COG0776	regulation of translation
JGUZn3_16300	COG0628	permease
JGUZn3_16320	COG0788	formyltetrahydrofolate deformylase activity
JGUZn3_16340	COG5265	(ABC) transporter
JGUZn3_16350	COG0227	Belongs to the bacterial ribosomal protein bL28 family
JGUZn3_16360	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
JGUZn3_16370	COG2261	transglycosylase associated protein
JGUZn3_16390	COG2733	membrane
JGUZn3_16410	COG0719	Fe-S assembly protein
JGUZn3_16420	COG0396	ATPase activity
JGUZn3_16430	COG0719	Fe-S assembly protein
JGUZn3_16440	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
JGUZn3_16460	COG2151	metal-sulfur cluster biosynthetic enzyme
JGUZn3_16480	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
JGUZn3_16490	COG0513	Belongs to the DEAD box helicase family
JGUZn3_16500	COG3387	PFAM Glycoside hydrolase 15-related
JGUZn3_16520	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
JGUZn3_16520	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
JGUZn3_16540	COG0544	peptidyl-prolyl cis-trans isomerase activity
JGUZn3_16550	COG0740	serine-type endopeptidase activity
JGUZn3_16560	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
JGUZn3_16610	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
JGUZn3_16620	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
JGUZn3_16630	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
JGUZn3_16640	COG0649	NAD binding
JGUZn3_16650	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
JGUZn3_16670	COG1034	ATP synthesis coupled electron transport
JGUZn3_16680	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
JGUZn3_16690	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
JGUZn3_16730	COG1007	ATP synthesis coupled electron transport
JGUZn3_16740	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
JGUZn3_16740	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
JGUZn3_16750	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
JGUZn3_16770	COG0442	prolyl-tRNA aminoacylation
JGUZn3_16790	COG1136	(ABC) transporter
JGUZn3_16810	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
JGUZn3_16820	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
JGUZn3_16830	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
JGUZn3_16850	COG0531	amino acid
JGUZn3_16860	COG0404	The glycine cleavage system catalyzes the degradation of glycine
JGUZn3_16870	COG0509	glycine decarboxylation via glycine cleavage system
JGUZn3_16880	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
JGUZn3_16880	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
JGUZn3_16900	COG1968	undecaprenyl-diphosphatase activity
JGUZn3_16920	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
JGUZn3_16930	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
JGUZn3_16970	COG3660	Nucleoside-diphosphate-sugar epimerase
JGUZn3_16990	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
JGUZn3_17000	COG0531	amino acid
JGUZn3_17010	COG0113	porphobilinogen synthase activity
JGUZn3_17030	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
JGUZn3_17040	COG1234	tRNA 3'-trailer cleavage
JGUZn3_17050	COG0084	hydrolase, TatD family'
JGUZn3_17080	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
JGUZn3_17090	COG1686	Belongs to the peptidase S11 family
JGUZn3_17100	COG2951	lytic endotransglycosylase activity
JGUZn3_17170	COG3383	formate dehydrogenase (NAD+) activity
JGUZn3_17170	COG0243	molybdopterin cofactor binding
JGUZn3_17180	COG0437	4 iron, 4 sulfur cluster binding
JGUZn3_17210	COG0303	'Molybdopterin
JGUZn3_17220	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
JGUZn3_17230	COG0746	molybdenum cofactor guanylyltransferase activity
JGUZn3_17240	COG0303	'Molybdopterin
JGUZn3_17260	COG2258	MOSC domain
JGUZn3_17270	COG0187	DNA topoisomerase II activity
JGUZn3_17280	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
JGUZn3_17300	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
JGUZn3_17310	COG0268	Binds directly to 16S ribosomal RNA
JGUZn3_17320	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
JGUZn3_17330	COG2226	methyltransferase
JGUZn3_17340	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
JGUZn3_17350	COG0756	dUTP diphosphatase activity
JGUZn3_17370	COG1116	anion transmembrane transporter activity
JGUZn3_17380	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
JGUZn3_17390	COG0129	dihydroxy-acid dehydratase activity
JGUZn3_17400	COG0525	valine-tRNA ligase activity
JGUZn3_17420	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
JGUZn3_17440	COG0300	oxidoreductase activity
JGUZn3_17450	COG0456	acetyltransferase
JGUZn3_17460	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
JGUZn3_17470	COG1923	regulation of RNA biosynthetic process
JGUZn3_17480	COG2204	response regulator
JGUZn3_17500	COG2204	response regulator
JGUZn3_17530	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
JGUZn3_17530	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
JGUZn3_17580	COG0564	pseudouridine synthase activity
JGUZn3_17590	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
JGUZn3_17730	COG0277	FAD linked oxidase domain protein
JGUZn3_17800	COG0564	pseudouridine synthase activity
JGUZn3_17820	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JGUZn3_17840	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
JGUZn3_17850	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
JGUZn3_17900	COG5006	permease, DMT superfamily
JGUZn3_17910	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
JGUZn3_17920	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
JGUZn3_17940	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
JGUZn3_17990	COG0038	chloride channel
JGUZn3_18000	COG0604	alcohol dehydrogenase
JGUZn3_18030	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
JGUZn3_18040	COG1692	metallophosphoesterase
JGUZn3_18050	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
JGUZn3_18090	COG1830	Aldolase
JGUZn3_18100	COG0352	thiamine-phosphate diphosphorylase activity
JGUZn3_18140	COG1509	lysine 2,3-aminomutase activity
JGUZn3_18150	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
JGUZn3_18160	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
JGUZn3_18170	COG0483	inositol monophosphate 1-phosphatase activity
JGUZn3_18220	COG0257	Belongs to the bacterial ribosomal protein bL36 family
JGUZn3_18230	COG0450	alkyl hydroperoxide reductase
JGUZn3_18240	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
JGUZn3_18260	COG0352	thiamine-phosphate diphosphorylase activity
JGUZn3_18260	COG0351	phosphomethylpyrimidine kinase
JGUZn3_18270	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
JGUZn3_18280	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
JGUZn3_18290	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
JGUZn3_18300	COG0037	tRNA processing
JGUZn3_18320	COG2885	chlorophyll binding
JGUZn3_18330	COG0823	Involved in the tonB-independent uptake of proteins
JGUZn3_18370	COG0824	Thioesterase
JGUZn3_18380	COG2255	four-way junction helicase activity
JGUZn3_18390	COG0632	four-way junction helicase activity
JGUZn3_18400	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
JGUZn3_18410	COG0217	transcriptional regulatory protein
JGUZn3_18420	COG0653	protein targeting
JGUZn3_18430	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
JGUZn3_18440	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
JGUZn3_18450	COG0820	rRNA (adenine-C2-)-methyltransferase activity
JGUZn3_18470	COG1215	transferase activity, transferring glycosyl groups
JGUZn3_18480	COG2814	Major facilitator Superfamily
JGUZn3_18490	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
JGUZn3_18510	COG3781	membrane
JGUZn3_18520	COG1329	Transcriptional regulator
JGUZn3_18530	COG0745	RESPONSE REGULATOR receiver
JGUZn3_18550	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
JGUZn3_18560	COG1702	phosphate starvation-inducible protein PhoH
JGUZn3_18570	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
JGUZn3_18590	COG0049	tRNA binding
JGUZn3_18600	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
JGUZn3_18610	COG1196	nuclear chromosome segregation
JGUZn3_18650	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
JGUZn3_18670	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
JGUZn3_18680	COG1138	Cytochrome C-type biogenesis protein
JGUZn3_18690	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JGUZn3_18700	COG3088	subunit of a heme lyase
JGUZn3_18710	COG4235	cytochrome complex assembly
JGUZn3_18720	COG1454	alcohol dehydrogenase
JGUZn3_18740	COG2193	ferroxidase activity
JGUZn3_18750	COG0612	Peptidase, M16
JGUZn3_18780	COG0539	negative regulation of cytoplasmic translation
JGUZn3_18790	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
JGUZn3_18800	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
JGUZn3_18850	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
JGUZn3_18860	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
JGUZn3_18870	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
JGUZn3_18900	COG0024	Methionine aminopeptidase
JGUZn3_18910	COG1686	Belongs to the peptidase S11 family
JGUZn3_18950	COG2326	polyphosphate kinase activity
JGUZn3_18960	COG1678	Uncharacterized ACR, COG1678
JGUZn3_18970	COG0167	dihydroorotate dehydrogenase activity
JGUZn3_18990	COG0306	phosphate transporter
JGUZn3_19010	COG1017	nitric oxide dioxygenase activity
JGUZn3_19010	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
JGUZn3_19030	COG3161	chorismate lyase activity
JGUZn3_19090	COG0519	Catalyzes the synthesis of GMP from XMP
JGUZn3_19150	COG2890	protein-(glutamine-N5) methyltransferase activity
JGUZn3_19170	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
JGUZn3_19180	COG0124	histidyl-tRNA synthetase
JGUZn3_19190	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
JGUZn3_19210	COG2070	2-Nitropropane dioxygenase
JGUZn3_19230	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
JGUZn3_19260	COG2226	methyltransferase
JGUZn3_19270	COG0137	argininosuccinate synthase activity
JGUZn3_19280	COG0545	Peptidyl-prolyl cis-trans isomerase
JGUZn3_19290	COG0180	Tryptophanyl-tRNA synthetase
JGUZn3_19300	COG0432	Pfam Uncharacterised protein family UPF0047
JGUZn3_19320	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
JGUZn3_19330	COG2706	6-phosphogluconolactonase activity
JGUZn3_19360	COG0281	malic enzyme
JGUZn3_19360	COG0280	phosphate acetyltransferase
JGUZn3_19390	COG0321	lipoyl(octanoyl) transferase activity
JGUZn3_19410	COG0271	Belongs to the BolA IbaG family
JGUZn3_19450	COG0671	phosphoesterase, PA-phosphatase related
JGUZn3_19460	COG0436	Aminotransferase
JGUZn3_19470	COG0436	Aminotransferase
JGUZn3_19530	COG1032	radical SAM domain protein
JGUZn3_19880	COG3077	Addiction module antitoxin, RelB DinJ family
JGUZn3_19970	COG0756	dUTP diphosphatase activity
JGUZn3_20030	COG0463	Glycosyl transferase, family 2
JGUZn3_20070	COG0175	sulfate reduction
JGUZn3_20080	COG0175	sulfate reduction
JGUZn3_20100	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
JGUZn3_20120	COG4208	sulfate ABC transporter
JGUZn3_20130	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
JGUZn3_20150	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
JGUZn3_20180	COG1335	isochorismatase
JGUZn3_20190	COG2390	Transcriptional regulator
JGUZn3_20210	COG2376	Dihydroxyacetone kinase
JGUZn3_20220	COG1028	Short-chain dehydrogenase reductase Sdr
JGUZn3_20230	COG2814	Major facilitator Superfamily
JGUZn3_20240	COG1063	alcohol dehydrogenase
JGUZn3_20250	COG0698	ribose 5-phosphate isomerase
JGUZn3_20260	COG1335	isochorismatase
JGUZn3_20280	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
JGUZn3_20290	COG1959	2 iron, 2 sulfur cluster binding
JGUZn3_20300	COG1069	ribulokinase activity
JGUZn3_20320	COG0019	diaminopimelate decarboxylase activity
JGUZn3_20360	COG4264	IucA IucC family
JGUZn3_20380	COG4772	TonB-dependent receptor
JGUZn3_20390	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
JGUZn3_20400	COG0583	DNA-binding transcription factor activity
JGUZn3_20470	COG3549	Plasmid maintenance system killer
JGUZn3_20500	COG2336	PFAM SpoVT AbrB
JGUZn3_20510	COG2337	Toxic component of a toxin-antitoxin (TA) module
JGUZn3_20650	COG0756	dUTP diphosphatase activity
JGUZn3_20700	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
JGUZn3_20720	COG0436	Aminotransferase
JGUZn3_20740	COG0740	serine-type endopeptidase activity
JGUZn3_20760	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
JGUZn3_21040	COG3561	AntA/AntB antirepressor
JGUZn3_21150	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
JGUZn3_21160	COG1518	maintenance of DNA repeat elements
JGUZn3_21190	COG1857	crispr-associated protein
JGUZn3_21220	COG1203	CRISPR-associated helicase, Cas3
JGUZn3_21290	COG1529	Aldehyde oxidase and xanthine dehydrogenase
JGUZn3_21310	COG2072	flavoprotein involved in K transport
JGUZn3_21350	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
JGUZn3_21370	COG2351	hydroxyisourate hydrolase activity
JGUZn3_21380	COG1079	Belongs to the binding-protein-dependent transport system permease family
JGUZn3_21390	COG4603	Belongs to the binding-protein-dependent transport system permease family
JGUZn3_21400	COG3845	ABC transporter
JGUZn3_21430	COG0583	DNA-binding transcription factor activity
JGUZn3_21440	COG1472	Belongs to the glycosyl hydrolase 3 family
JGUZn3_21510	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
JGUZn3_21520	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
JGUZn3_21570	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
JGUZn3_21580	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JGUZn3_21600	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
JGUZn3_21620	COG1609	Transcriptional regulator
JGUZn3_21630	COG0477	Major facilitator Superfamily
JGUZn3_21640	COG1862	Preprotein translocase
JGUZn3_21660	COG0089	rRNA binding
JGUZn3_21670	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
JGUZn3_21680	COG0805	protein transport
JGUZn3_21690	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
JGUZn3_21700	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
JGUZn3_21710	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
JGUZn3_21730	COG0018	arginyl-trna synthetase
JGUZn3_21740	COG0232	Belongs to the dGTPase family. Type 2 subfamily
JGUZn3_21750	COG0316	Belongs to the HesB IscA family
JGUZn3_21760	COG0708	Exodeoxyribonuclease III
JGUZn3_21770	COG0517	IMP dehydrogenase activity
JGUZn3_21780	COG0640	Transcriptional regulator
JGUZn3_21790	COG1902	pentaerythritol trinitrate reductase activity
JGUZn3_21810	COG0406	alpha-ribazole phosphatase activity
JGUZn3_21820	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JGUZn3_21830	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JGUZn3_21830	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
JGUZn3_21860	COG1028	Short-chain dehydrogenase reductase Sdr
JGUZn3_21900	COG0582	viral genome integration into host DNA
JGUZn3_21910	COG3620	sequence-specific DNA binding
JGUZn3_22000	COG3750	Belongs to the UPF0335 family
JGUZn3_22190	COG4115	mRNA cleavage
JGUZn3_22400	COG4386	tail sheath protein
JGUZn3_22440	COG0741	lytic transglycosylase activity
JGUZn3_22440	COG0739	heme binding
JGUZn3_22440	COG1196	nuclear chromosome segregation
JGUZn3_22540	COG3778	Protein conserved in bacteria
JGUZn3_22660	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
JGUZn3_22680	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
JGUZn3_22700	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
JGUZn3_22730	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
JGUZn3_22750	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
JGUZn3_22760	COG2011	ABC-type metal ion transport system permease component
JGUZn3_22780	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
JGUZn3_22810	COG1289	transmembrane transporter activity
JGUZn3_22820	COG0513	Belongs to the DEAD box helicase family
JGUZn3_22840	COG0778	Nitroreductase
JGUZn3_22860	COG0131	Imidazoleglycerol-phosphate dehydratase
JGUZn3_22880	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
JGUZn3_22890	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
JGUZn3_22900	COG0107	imidazoleglycerol-phosphate synthase activity
JGUZn3_22910	COG0140	phosphoribosyl-ATP diphosphatase activity
JGUZn3_22960	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
JGUZn3_22970	COG0540	Belongs to the ATCase OTCase family
JGUZn3_22980	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
JGUZn3_22990	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
JGUZn3_23000	COG0758	DNA mediated transformation
JGUZn3_23010	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
JGUZn3_23020	COG0793	Belongs to the peptidase S41A family
JGUZn3_23040	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
JGUZn3_23040	COG2885	chlorophyll binding
JGUZn3_23050	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
JGUZn3_23140	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
JGUZn3_23160	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
JGUZn3_23170	COG0196	riboflavin kinase activity
JGUZn3_23180	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
JGUZn3_23210	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
JGUZn3_23220	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
JGUZn3_23240	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
JGUZn3_23270	COG1139	Iron-sulfur cluster binding protein
JGUZn3_23280	COG0247	lactate metabolic process
JGUZn3_23310	COG1643	Atp-dependent helicase
JGUZn3_23340	COG2205	protein histidine kinase activity
JGUZn3_23380	COG0772	Belongs to the SEDS family
JGUZn3_23390	COG0768	penicillin binding
JGUZn3_23450	COG1530	ribonuclease E activity
JGUZn3_23470	COG1959	2 iron, 2 sulfur cluster binding
JGUZn3_23480	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
JGUZn3_23500	COG0425	Belongs to the sulfur carrier protein TusA family
JGUZn3_23510	COG1722	exodeoxyribonuclease VII activity
JGUZn3_23530	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
JGUZn3_23540	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
JGUZn3_23570	COG1058	Belongs to the CinA family
JGUZn3_23570	COG1546	Belongs to the CinA family
JGUZn3_23580	COG0825	malonyl-CoA metabolic process
JGUZn3_23590	COG4974	Belongs to the 'phage' integrase family
JGUZn3_23620	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
JGUZn3_23630	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
JGUZn3_23630	COG2885	chlorophyll binding
JGUZn3_23650	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
JGUZn3_23660	COG0784	Response regulator, receiver
JGUZn3_23660	COG4191	Histidine kinase
JGUZn3_23690	COG3416	Protein conserved in bacteria
JGUZn3_23700	COG0752	glycyl-tRNA synthetase alpha subunit
JGUZn3_23730	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
JGUZn3_23740	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
JGUZn3_23760	COG0297	glycogen (starch) synthase activity
JGUZn3_23790	COG0625	glutathione transferase activity
JGUZn3_23800	COG0850	regulation of cytokinetic process
JGUZn3_23810	COG2894	cell division
JGUZn3_23820	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
JGUZn3_23830	COG1132	(ABC) transporter
JGUZn3_23840	COG2166	iron-sulfur cluster assembly
JGUZn3_23850	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
JGUZn3_23860	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
JGUZn3_23910	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
JGUZn3_23960	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
JGUZn3_24000	COG1064	alcohol dehydrogenase
JGUZn3_24020	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JGUZn3_24040	COG0688	phosphatidylethanolamine metabolic process
JGUZn3_24070	COG0649	NAD binding
JGUZn3_24120	COG0656	L-ascorbic acid biosynthetic process
JGUZn3_24150	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
JGUZn3_24160	COG1218	3'(2'),5'-bisphosphate nucleotidase
JGUZn3_24170	COG0009	L-threonylcarbamoyladenylate synthase
JGUZn3_24210	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
JGUZn3_24220	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
JGUZn3_24230	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
JGUZn3_24240	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
JGUZn3_24250	COG0359	binds to the 23S rRNA
JGUZn3_24260	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
JGUZn3_24270	COG0360	Binds together with S18 to 16S ribosomal RNA