locus-tag class description CHL1_000001 PF00712 DNA polymerase III beta subunit, N-terminal domain CHL1_000001 PF02767 DNA polymerase III beta subunit, central domain CHL1_000001 PF02768 DNA polymerase III beta subunit, C-terminal domain CHL1_000003 PF02463 RecF/RecN/SMC N terminal domain CHL1_000004 PF00204 DNA gyrase B CHL1_000004 PF00986 DNA gyrase B subunit, carboxyl terminus CHL1_000004 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHL1_000004 PF01751 Toprim domain CHL1_000005 PF03989 DNA gyrase C-terminal domain, beta-propeller CHL1_000005 PF00521 DNA gyrase/topoisomerase IV, subunit A CHL1_000007 PF00834 Ribulose-phosphate 3 epimerase family CHL1_000008 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CHL1_000009 PF01554 MatE CHL1_000010 PF12697 Alpha/beta hydrolase family CHL1_000010 PF08241 Methyltransferase domain CHL1_000011 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family CHL1_000012 PF03466 LysR substrate binding domain CHL1_000012 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CHL1_000013 PF00528 Binding-protein-dependent transport system inner membrane component CHL1_000014 PF00528 Binding-protein-dependent transport system inner membrane component CHL1_000014 PF12911 N-terminal TM domain of oligopeptide transport permease C CHL1_000015 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CHL1_000016 PF00005 ABC transporter CHL1_000016 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CHL1_000017 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CHL1_000017 PF00005 ABC transporter CHL1_000020 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CHL1_000021 PF00528 Binding-protein-dependent transport system inner membrane component CHL1_000022 PF00528 Binding-protein-dependent transport system inner membrane component CHL1_000022 PF12911 N-terminal TM domain of oligopeptide transport permease C CHL1_000023 PF00005 ABC transporter CHL1_000024 PF00005 ABC transporter CHL1_000025 PF01169 Uncharacterized protein family UPF0016 CHL1_000026 PF13344 Haloacid dehalogenase-like hydrolase CHL1_000028 PF02597 ThiS family CHL1_000028 PF05690 Thiazole biosynthesis protein ThiG CHL1_000029 PF05690 Thiazole biosynthesis protein ThiG CHL1_000030 PF06968 Biotin and Thiamin Synthesis associated domain CHL1_000030 PF04055 Radical SAM superfamily CHL1_000031 PF02581 Thiamine monophosphate synthase CHL1_000032 PF00563 EAL domain CHL1_000032 PF00990 Diguanylate cyclase, GGDEF domain CHL1_000032 PF03707 Bacterial signalling protein N terminal repeat CHL1_000033 PF01872 RibD C-terminal domain CHL1_000033 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CHL1_000034 PF00677 Lumazine binding domain CHL1_000035 PF00925 GTP cyclohydrolase II CHL1_000035 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CHL1_000036 PF00885 6,7-dimethyl-8-ribityllumazine synthase CHL1_000038 PF01546 Peptidase family M20/M25/M40 CHL1_000039 PF03099 Biotin/lipoate A/B protein ligase family CHL1_000039 PF08279 HTH domain CHL1_000039 PF02237 Biotin protein ligase C terminal domain CHL1_000040 PF02632 BioY family CHL1_000041 PF00512 His Kinase A (phospho-acceptor) domain CHL1_000041 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHL1_000042 PF00486 Transcriptional regulatory protein, C terminal CHL1_000042 PF00072 Response regulator receiver domain CHL1_000043 PF00005 ABC transporter CHL1_000046 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CHL1_000046 PF00364 Biotin-requiring enzyme CHL1_000046 PF02817 e3 binding domain CHL1_000047 PF04055 Radical SAM superfamily CHL1_000048 PF03099 Biotin/lipoate A/B protein ligase family CHL1_000048 PF10437 Bacterial lipoate protein ligase C-terminus CHL1_000050 PF03960 ArsC family CHL1_000057 PF05726 Pirin C-terminal cupin domain CHL1_000057 PF02678 Pirin CHL1_000064 PF01638 HxlR-like helix-turn-helix CHL1_000065 PF00291 Pyridoxal-phosphate dependent enzyme CHL1_000066 PF02142 MGS-like domain CHL1_000068 PF09962 Uncharacterized conserved protein (DUF2196) CHL1_000073 PF01418 Helix-turn-helix domain, rpiR family CHL1_000073 PF01380 SIS domain CHL1_000074 PF08240 Alcohol dehydrogenase GroES-like domain CHL1_000074 PF00107 Zinc-binding dehydrogenase CHL1_000075 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CHL1_000075 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CHL1_000076 PF01791 DeoC/LacD family aldolase CHL1_000079 PF13732 Domain of unknown function (DUF4162) CHL1_000079 PF00005 ABC transporter CHL1_000080 PF00881 Nitroreductase family CHL1_000081 PF00990 Diguanylate cyclase, GGDEF domain CHL1_000081 PF08448 PAS fold CHL1_000082 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHL1_000082 PF00512 His Kinase A (phospho-acceptor) domain CHL1_000084 PF00072 Response regulator receiver domain CHL1_000084 PF00486 Transcriptional regulatory protein, C terminal CHL1_000089 PF01381 Helix-turn-helix CHL1_000090 PF05973 Phage derived protein Gp49-like (DUF891) CHL1_000100 PF03372 Endonuclease/Exonuclease/phosphatase family CHL1_000101 PF03372 Endonuclease/Exonuclease/phosphatase family CHL1_000104 PF00664 ABC transporter transmembrane region CHL1_000104 PF00005 ABC transporter CHL1_000105 PF00005 ABC transporter CHL1_000105 PF00664 ABC transporter transmembrane region CHL1_000106 PF06445 GyrI-like small molecule binding domain CHL1_000106 PF12833 Helix-turn-helix domain CHL1_000109 PF01556 DnaJ C terminal domain CHL1_000109 PF00684 DnaJ central domain CHL1_000109 PF00226 DnaJ domain CHL1_000113 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CHL1_000113 PF07992 Pyridine nucleotide-disulphide oxidoreductase CHL1_000117 PF01381 Helix-turn-helix CHL1_000119 PF02634 FdhD/NarQ family CHL1_000121 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CHL1_000121 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CHL1_000121 PF00037 4Fe-4S binding domain CHL1_000121 PF00384 Molybdopterin oxidoreductase CHL1_000121 PF01568 Molydopterin dinucleotide binding domain CHL1_000122 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CHL1_000122 PF00037 4Fe-4S binding domain CHL1_000122 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CHL1_000125 PF00072 Response regulator receiver domain CHL1_000125 PF00486 Transcriptional regulatory protein, C terminal CHL1_000126 PF00512 His Kinase A (phospho-acceptor) domain CHL1_000126 PF00672 HAMP domain CHL1_000126 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHL1_000127 PF00005 ABC transporter CHL1_000129 PF01661 Macro domain CHL1_000131 PF12833 Helix-turn-helix domain CHL1_000133 PF07992 Pyridine nucleotide-disulphide oxidoreductase CHL1_000133 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CHL1_000134 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CHL1_000134 PF02817 e3 binding domain CHL1_000134 PF00364 Biotin-requiring enzyme CHL1_000135 PF02780 Transketolase, C-terminal domain CHL1_000135 PF02779 Transketolase, pyrimidine binding domain CHL1_000136 PF00676 Dehydrogenase E1 component CHL1_000137 PF00158 Sigma-54 interaction domain CHL1_000137 PF02954 Bacterial regulatory protein, Fis family CHL1_000137 PF13426 PAS domain CHL1_000140 PF00990 Diguanylate cyclase, GGDEF domain CHL1_000140 PF17156 Gammaproteobacterial periplasmic sensor domain CHL1_000143 PF01964 Radical SAM ThiC family CHL1_000144 PF00563 EAL domain CHL1_000144 PF00990 Diguanylate cyclase, GGDEF domain CHL1_000145 PF01966 HD domain CHL1_000146 PF00578 AhpC/TSA family CHL1_000147 PF01593 Flavin containing amine oxidoreductase CHL1_000149 PF01593 Flavin containing amine oxidoreductase CHL1_000154 PF00107 Zinc-binding dehydrogenase CHL1_000154 PF08240 Alcohol dehydrogenase GroES-like domain CHL1_000155 PF00591 Glycosyl transferase family, a/b domain CHL1_000155 PF02885 Glycosyl transferase family, helical bundle domain CHL1_000158 PF01926 50S ribosome-binding GTPase CHL1_000161 PF00258 Flavodoxin CHL1_000162 PF00909 Ammonium Transporter Family CHL1_000163 PF00543 Nitrogen regulatory protein P-II CHL1_000164 PF00120 Glutamine synthetase, catalytic domain CHL1_000164 PF18318 Glutamine synthetase C-terminal domain CHL1_000164 PF12437 Glutamine synthetase type III N terminal CHL1_000166 PF00120 Glutamine synthetase, catalytic domain CHL1_000166 PF03951 Glutamine synthetase, beta-Grasp domain CHL1_000167 PF00072 Response regulator receiver domain CHL1_000167 PF03861 ANTAR domain CHL1_000168 PF00709 Adenylosuccinate synthetase CHL1_000169 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CHL1_000169 PF00117 Glutamine amidotransferase class-I CHL1_000170 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CHL1_000170 PF02142 MGS-like domain CHL1_000170 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CHL1_000171 PF00563 EAL domain CHL1_000171 PF01590 GAF domain CHL1_000171 PF00990 Diguanylate cyclase, GGDEF domain CHL1_000171 PF00360 Phytochrome region CHL1_000172 PF00437 Type II/IV secretion system protein CHL1_000173 PF00437 Type II/IV secretion system protein CHL1_000176 PF01478 Type IV leader peptidase family CHL1_000176 PF06750 Bacterial Peptidase A24 N-terminal domain CHL1_000177 PF00482 Type II secretion system (T2SS), protein F CHL1_000184 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain CHL1_000184 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CHL1_000184 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CHL1_000185 PF03481 Putative GTP-binding controlling metal-binding CHL1_000185 PF01300 Telomere recombination CHL1_000186 PF02502 Ribose/Galactose Isomerase CHL1_000189 PF00119 ATP synthase A chain CHL1_000190 PF00137 ATP synthase subunit C CHL1_000191 PF00137 ATP synthase subunit C CHL1_000192 PF00137 ATP synthase subunit C CHL1_000194 PF00213 ATP synthase delta (OSCP) subunit CHL1_000195 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CHL1_000195 PF00306 ATP synthase alpha/beta chain, C terminal domain CHL1_000195 PF02874 ATP synthase alpha/beta family, beta-barrel domain CHL1_000196 PF00231 ATP synthase CHL1_000197 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CHL1_000197 PF02874 ATP synthase alpha/beta family, beta-barrel domain CHL1_000198 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CHL1_000198 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CHL1_000199 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CHL1_000199 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CHL1_000199 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CHL1_000200 PF00483 Nucleotidyl transferase CHL1_000201 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CHL1_000201 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CHL1_000201 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CHL1_000201 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CHL1_000202 PF03816 Cell envelope-related transcriptional attenuator domain CHL1_000203 PF04321 RmlD substrate binding domain CHL1_000204 PF00483 Nucleotidyl transferase CHL1_000205 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CHL1_000206 PF16363 GDP-mannose 4,6 dehydratase CHL1_000207 PF01061 ABC-2 type transporter CHL1_000208 PF00005 ABC transporter CHL1_000208 PF08239 Bacterial SH3 domain CHL1_000209 PF00535 Glycosyl transferase family 2 CHL1_000210 PF01520 N-acetylmuramoyl-L-alanine amidase CHL1_000212 PF00535 Glycosyl transferase family 2 CHL1_000212 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 CHL1_000213 PF00535 Glycosyl transferase family 2 CHL1_000213 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 CHL1_000214 PF02397 Bacterial sugar transferase CHL1_000223 PF03816 Cell envelope-related transcriptional attenuator domain CHL1_000228 PF00497 Bacterial extracellular solute-binding proteins, family 3 CHL1_000229 PF00528 Binding-protein-dependent transport system inner membrane component CHL1_000230 PF00005 ABC transporter CHL1_000236 PF00005 ABC transporter CHL1_000237 PF12704 MacB-like periplasmic core domain CHL1_000237 PF00005 ABC transporter CHL1_000237 PF02687 FtsX-like permease family CHL1_000238 PF00072 Response regulator receiver domain CHL1_000238 PF00486 Transcriptional regulatory protein, C terminal CHL1_000239 PF00512 His Kinase A (phospho-acceptor) domain CHL1_000239 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHL1_000239 PF00672 HAMP domain CHL1_000240 PF00672 HAMP domain CHL1_000240 PF01966 HD domain CHL1_000241 PF00005 ABC transporter CHL1_000241 PF00664 ABC transporter transmembrane region CHL1_000242 PF00664 ABC transporter transmembrane region CHL1_000242 PF00005 ABC transporter CHL1_000244 PF03591 AzlC protein CHL1_000245 PF05437 Branched-chain amino acid transport protein (AzlD) CHL1_000247 PF01638 HxlR-like helix-turn-helix CHL1_000249 PF18389 TrmO C-terminal domain CHL1_000249 PF01980 tRNA-methyltransferase O CHL1_000250 PF02390 Putative methyltransferase CHL1_000251 PF12848 ABC transporter CHL1_000251 PF16326 ABC transporter C-terminal domain CHL1_000251 PF00005 ABC transporter CHL1_000255 PF08544 GHMP kinases C terminal CHL1_000255 PF00288 GHMP kinases N terminal domain CHL1_000256 PF00291 Pyridoxal-phosphate dependent enzyme CHL1_000256 PF14821 Threonine synthase N terminus CHL1_000257 PF01842 ACT domain CHL1_000257 PF00742 Homoserine dehydrogenase CHL1_000257 PF03447 Homoserine dehydrogenase, NAD binding domain CHL1_000258 PF00696 Amino acid kinase family CHL1_000258 PF13840 ACT domain CHL1_000259 PF02386 Cation transport protein CHL1_000260 PF02080 TrkA-C domain CHL1_000260 PF02254 TrkA-N domain CHL1_000261 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CHL1_000261 PF00437 Type II/IV secretion system protein CHL1_000262 PF00482 Type II secretion system (T2SS), protein F CHL1_000264 PF00258 Flavodoxin CHL1_000264 PF00753 Metallo-beta-lactamase superfamily CHL1_000264 PF00301 Rubredoxin CHL1_000267 PF00072 Response regulator receiver domain CHL1_000267 PF00486 Transcriptional regulatory protein, C terminal CHL1_000268 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHL1_000268 PF00512 His Kinase A (phospho-acceptor) domain CHL1_000268 PF00672 HAMP domain CHL1_000269 PF00465 Iron-containing alcohol dehydrogenase CHL1_000270 PF00580 UvrD/REP helicase N-terminal domain CHL1_000270 PF13361 UvrD-like helicase C-terminal domain CHL1_000271 PF03120 NAD-dependent DNA ligase OB-fold domain CHL1_000271 PF01653 NAD-dependent DNA ligase adenylation domain CHL1_000271 PF00533 BRCA1 C Terminus (BRCT) domain CHL1_000271 PF12826 Helix-hairpin-helix motif CHL1_000271 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CHL1_000272 PF02686 Glu-tRNAGln amidotransferase C subunit CHL1_000273 PF01425 Amidase CHL1_000274 PF02934 GatB/GatE catalytic domain CHL1_000274 PF02637 GatB domain CHL1_000275 PF03725 3' exoribonuclease family, domain 2 CHL1_000275 PF01138 3' exoribonuclease family, domain 1 CHL1_000276 PF01725 Ham1 family CHL1_000278 PF00005 ABC transporter CHL1_000279 PF01061 ABC-2 type transporter CHL1_000285 PF08386 TAP-like protein CHL1_000285 PF00561 alpha/beta hydrolase fold CHL1_000286 PF01641 SelR domain CHL1_000286 PF01625 Peptide methionine sulfoxide reductase CHL1_000286 PF08534 Redoxin CHL1_000287 PF03733 Inner membrane component domain CHL1_000288 PF09383 NIL domain CHL1_000288 PF00005 ABC transporter CHL1_000289 PF00528 Binding-protein-dependent transport system inner membrane component CHL1_000290 PF03180 NLPA lipoprotein CHL1_000291 PF01235 Sodium:alanine symporter family CHL1_000293 PF00486 Transcriptional regulatory protein, C terminal CHL1_000293 PF00072 Response regulator receiver domain CHL1_000294 PF00989 PAS fold CHL1_000294 PF18698 Histidine kinase sensor domain CHL1_000294 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHL1_000294 PF00512 His Kinase A (phospho-acceptor) domain CHL1_000294 PF00672 HAMP domain CHL1_000295 PF02277 Phosphoribosyltransferase CHL1_000297 PF00005 ABC transporter CHL1_000298 PF00501 AMP-binding enzyme CHL1_000298 PF14535 AMP-binding enzyme C-terminal domain CHL1_000301 PF00486 Transcriptional regulatory protein, C terminal CHL1_000301 PF00072 Response regulator receiver domain CHL1_000302 PF00672 HAMP domain CHL1_000302 PF13426 PAS domain CHL1_000302 PF00512 His Kinase A (phospho-acceptor) domain CHL1_000302 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHL1_000303 PF08220 DeoR-like helix-turn-helix domain CHL1_000303 PF00455 DeoR C terminal sensor domain CHL1_000304 PF00294 pfkB family carbohydrate kinase CHL1_000305 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CHL1_000305 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CHL1_000309 PF12822 ECF transporter, substrate-specific component CHL1_000313 PF00343 Carbohydrate phosphorylase CHL1_000314 PF00128 Alpha amylase, catalytic domain CHL1_000314 PF02903 Alpha amylase, N-terminal ig-like domain CHL1_000315 PF00128 Alpha amylase, catalytic domain CHL1_000315 PF02903 Alpha amylase, N-terminal ig-like domain CHL1_000316 PF00534 Glycosyl transferases group 1 CHL1_000316 PF08323 Starch synthase catalytic domain CHL1_000317 PF00483 Nucleotidyl transferase CHL1_000317 PF00132 Bacterial transferase hexapeptide (six repeats) CHL1_000318 PF00483 Nucleotidyl transferase CHL1_000318 PF00132 Bacterial transferase hexapeptide (six repeats) CHL1_000319 PF00343 Carbohydrate phosphorylase CHL1_000320 PF02806 Alpha amylase, C-terminal all-beta domain CHL1_000320 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CHL1_000320 PF00128 Alpha amylase, catalytic domain CHL1_000323 PF00330 Aconitase family (aconitate hydratase) CHL1_000325 PF02645 Uncharacterised protein, DegV family COG1307 CHL1_000326 PF09371 Tex-like protein N-terminal domain CHL1_000326 PF16921 Tex protein YqgF-like domain CHL1_000326 PF00575 S1 RNA binding domain CHL1_000326 PF17674 HHH domain CHL1_000327 PF02559 CarD-like/TRCF domain CHL1_000329 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF CHL1_000329 PF17126 RsmF rRNA methyltransferase first C-terminal domain CHL1_000329 PF01189 16S rRNA methyltransferase RsmB/F CHL1_000331 PF04463 Protein of unknown function (DUF523) CHL1_000332 PF07478 D-ala D-ala ligase C-terminus CHL1_000332 PF01820 D-ala D-ala ligase N-terminus CHL1_000334 PF05746 DALR anticodon binding domain CHL1_000334 PF03485 Arginyl tRNA synthetase N terminal domain CHL1_000334 PF00750 tRNA synthetases class I (R) CHL1_000335 PF00899 ThiF family CHL1_000336 PF02542 YgbB family CHL1_000337 PF01048 Phosphorylase superfamily CHL1_000338 PF00842 Alanine racemase, C-terminal domain CHL1_000338 PF01168 Alanine racemase, N-terminal domain CHL1_000339 PF00456 Transketolase, thiamine diphosphate binding domain CHL1_000340 PF02780 Transketolase, C-terminal domain CHL1_000340 PF02779 Transketolase, pyrimidine binding domain CHL1_000343 PF00005 ABC transporter CHL1_000344 PF02361 Cobalt transport protein CHL1_000346 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CHL1_000347 PF05378 Hydantoinase/oxoprolinase N-terminal region CHL1_000347 PF01968 Hydantoinase/oxoprolinase CHL1_000350 PF02441 Flavoprotein CHL1_000354 PF13280 WYL domain CHL1_000354 PF08279 HTH domain CHL1_000357 PF00005 ABC transporter CHL1_000360 PF00486 Transcriptional regulatory protein, C terminal CHL1_000360 PF00072 Response regulator receiver domain CHL1_000361 PF00512 His Kinase A (phospho-acceptor) domain CHL1_000361 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHL1_000364 PF01597 Glycine cleavage H-protein CHL1_000365 PF08669 Glycine cleavage T-protein C-terminal barrel domain CHL1_000365 PF01571 Aminomethyltransferase folate-binding domain CHL1_000366 PF02347 Glycine cleavage system P-protein CHL1_000367 PF02347 Glycine cleavage system P-protein CHL1_000368 PF03315 Serine dehydratase beta chain CHL1_000368 PF01842 ACT domain CHL1_000369 PF03313 Serine dehydratase alpha chain CHL1_000370 PF00682 HMGL-like CHL1_000370 PF08502 LeuA allosteric (dimerisation) domain CHL1_000371 PF00682 HMGL-like CHL1_000371 PF08502 LeuA allosteric (dimerisation) domain CHL1_000372 PF00682 HMGL-like CHL1_000372 PF08502 LeuA allosteric (dimerisation) domain CHL1_000373 PF01037 Lrp/AsnC ligand binding domain CHL1_000374 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CHL1_000374 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CHL1_000376 PF00440 Bacterial regulatory proteins, tetR family CHL1_000377 PF02203 Tar ligand binding domain homologue CHL1_000377 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CHL1_000377 PF00672 HAMP domain CHL1_000379 PF07690 Major Facilitator Superfamily CHL1_000380 PF08448 PAS fold CHL1_000380 PF00990 Diguanylate cyclase, GGDEF domain CHL1_000381 PF13458 Periplasmic binding protein CHL1_000382 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CHL1_000382 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CHL1_000382 PF06827 Zinc finger found in FPG and IleRS CHL1_000383 PF08361 MAATS-type transcriptional repressor, C-terminal region CHL1_000383 PF00440 Bacterial regulatory proteins, tetR family CHL1_000384 PF00005 ABC transporter CHL1_000386 PF01047 MarR family CHL1_000387 PF00202 Aminotransferase class-III CHL1_000388 PF01894 Uncharacterised protein family UPF0047 CHL1_000390 PF00857 Isochorismatase family CHL1_000391 PF01638 HxlR-like helix-turn-helix CHL1_000397 PF13280 WYL domain CHL1_000397 PF08279 HTH domain CHL1_000401 PF04993 TfoX N-terminal domain CHL1_000403 PF00462 Glutaredoxin CHL1_000408 PF00248 Aldo/keto reductase family CHL1_000411 PF00440 Bacterial regulatory proteins, tetR family CHL1_000411 PF18665 Tetracyclin repressor-like, C-terminal domain CHL1_000413 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system CHL1_000421 PF01048 Phosphorylase superfamily CHL1_000422 PF01008 Initiation factor 2 subunit family CHL1_000424 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CHL1_000426 PF00535 Glycosyl transferase family 2 CHL1_000429 PF01261 Xylose isomerase-like TIM barrel CHL1_000430 PF01497 Periplasmic binding protein CHL1_000431 PF01032 FecCD transport family CHL1_000432 PF00005 ABC transporter CHL1_000433 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CHL1_000433 PF07685 CobB/CobQ-like glutamine amidotransferase domain CHL1_000434 PF00288 GHMP kinases N terminal domain CHL1_000435 PF02570 Precorrin-8X methylmutase CHL1_000436 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CHL1_000437 PF01888 CbiD CHL1_000439 PF05175 Methyltransferase small domain CHL1_000440 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CHL1_000443 PF02633 Creatinine amidohydrolase CHL1_000447 PF00072 Response regulator receiver domain CHL1_000447 PF00486 Transcriptional regulatory protein, C terminal CHL1_000448 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHL1_000449 PF00005 ABC transporter CHL1_000450 PF02687 FtsX-like permease family CHL1_000451 PF03707 Bacterial signalling protein N terminal repeat CHL1_000451 PF00563 EAL domain CHL1_000451 PF00990 Diguanylate cyclase, GGDEF domain CHL1_000452 PF01891 Cobalt uptake substrate-specific transmembrane region CHL1_000454 PF02361 Cobalt transport protein CHL1_000455 PF00005 ABC transporter CHL1_000456 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CHL1_000456 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CHL1_000456 PF01488 Shikimate / quinate 5-dehydrogenase CHL1_000457 PF14824 Sirohaem biosynthesis protein central CHL1_000457 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CHL1_000457 PF10414 Sirohaem synthase dimerisation region CHL1_000458 PF02602 Uroporphyrinogen-III synthase HemD CHL1_000458 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CHL1_000459 PF00490 Delta-aminolevulinic acid dehydratase CHL1_000460 PF00202 Aminotransferase class-III CHL1_000461 PF06180 Cobalt chelatase (CbiK) CHL1_000462 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CHL1_000463 PF11760 Cobalamin synthesis G N-terminal CHL1_000463 PF01890 Cobalamin synthesis G C-terminus CHL1_000463 PF11761 Cobalamin biosynthesis central region CHL1_000464 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CHL1_000465 PF02571 Precorrin-6x reductase CbiJ/CobK CHL1_000466 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CHL1_000466 PF07685 CobB/CobQ-like glutamine amidotransferase domain CHL1_000467 PF03186 CobD/Cbib protein CHL1_000468 PF00155 Aminotransferase class I and II CHL1_000469 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CHL1_000471 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CHL1_000471 PF07992 Pyridine nucleotide-disulphide oxidoreductase CHL1_000477 PF02687 FtsX-like permease family CHL1_000477 PF00005 ABC transporter CHL1_000477 PF12704 MacB-like periplasmic core domain CHL1_000478 PF00005 ABC transporter CHL1_000482 PF02810 SEC-C motif CHL1_000482 PF07517 SecA DEAD-like domain CHL1_000482 PF01043 SecA preprotein cross-linking domain CHL1_000482 PF07516 SecA Wing and Scaffold domain CHL1_000485 PF01790 Prolipoprotein diacylglyceryl transferase CHL1_000487 PF08245 Mur ligase middle domain CHL1_000487 PF02875 Mur ligase family, glutamate ligase domain CHL1_000487 PF01225 Mur ligase family, catalytic domain CHL1_000488 PF00156 Phosphoribosyl transferase domain CHL1_000488 PF09182 Bacterial purine repressor, N-terminal CHL1_000489 PF04026 SpoVG CHL1_000490 PF00132 Bacterial transferase hexapeptide (six repeats) CHL1_000490 PF14602 Hexapeptide repeat of succinyl-transferase CHL1_000490 PF12804 MobA-like NTP transferase domain CHL1_000491 PF14572 Phosphoribosyl synthetase-associated domain CHL1_000491 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CHL1_000492 PF01195 Peptidyl-tRNA hydrolase CHL1_000493 PF03461 TRCF domain CHL1_000493 PF00271 Helicase conserved C-terminal domain CHL1_000493 PF17757 UvrB interaction domain CHL1_000493 PF02559 CarD-like/TRCF domain CHL1_000493 PF00270 DEAD/DEAH box helicase CHL1_000495 PF01943 Polysaccharide biosynthesis protein CHL1_000495 PF14667 Polysaccharide biosynthesis C-terminal domain CHL1_000496 PF03819 MazG nucleotide pyrophosphohydrolase domain CHL1_000496 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CHL1_000497 PF00216 Bacterial DNA-binding protein CHL1_000498 PF01479 S4 domain CHL1_000500 PF02541 Ppx/GppA phosphatase family CHL1_000500 PF01761 3-dehydroquinate synthase CHL1_000506 PF11734 TilS substrate C-terminal domain CHL1_000506 PF01171 PP-loop family CHL1_000507 PF00156 Phosphoribosyl transferase domain CHL1_000508 PF01434 Peptidase family M41 CHL1_000508 PF06480 FtsH Extracellular CHL1_000508 PF17862 AAA+ lid domain CHL1_000508 PF00004 ATPase family associated with various cellular activities (AAA) CHL1_000510 PF03309 Type III pantothenate kinase CHL1_000511 PF01207 Dihydrouridine synthase (Dus) CHL1_000512 PF08245 Mur ligase middle domain CHL1_000512 PF02875 Mur ligase family, glutamate ligase domain CHL1_000515 PF03006 Haemolysin-III related CHL1_000516 PF06418 CTP synthase N-terminus CHL1_000516 PF00117 Glutamine amidotransferase class-I CHL1_000517 PF00795 Carbon-nitrogen hydrolase CHL1_000517 PF02540 NAD synthase CHL1_000519 PF00270 DEAD/DEAH box helicase CHL1_000519 PF00271 Helicase conserved C-terminal domain CHL1_000520 PF01554 MatE CHL1_000521 PF00636 Ribonuclease III domain CHL1_000522 PF09190 DALR domain CHL1_000522 PF01406 tRNA synthetases class I (C) catalytic domain CHL1_000523 PF01371 Trp repressor protein CHL1_000524 PF00155 Aminotransferase class I and II CHL1_000526 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CHL1_000527 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CHL1_000528 PF00676 Dehydrogenase E1 component CHL1_000529 PF02780 Transketolase, C-terminal domain CHL1_000529 PF02779 Transketolase, pyrimidine binding domain CHL1_000529 PF00364 Biotin-requiring enzyme CHL1_000531 PF00364 Biotin-requiring enzyme CHL1_000531 PF02817 e3 binding domain CHL1_000531 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CHL1_000532 PF00571 CBS domain CHL1_000532 PF00478 IMP dehydrogenase / GMP reductase domain CHL1_000533 PF00117 Glutamine amidotransferase class-I CHL1_000533 PF02540 NAD synthase CHL1_000533 PF00958 GMP synthase C terminal domain CHL1_000542 PF13395 HNH endonuclease CHL1_000542 PF18541 RuvC endonuclease subdomain 3 CHL1_000543 PF01867 CRISPR associated protein Cas1 CHL1_000544 PF09827 CRISPR associated protein Cas2 CHL1_000545 PF13333 Integrase core domain CHL1_000545 PF13276 HTH-like domain CHL1_000545 PF00665 Integrase core domain CHL1_000548 PF01145 SPFH domain / Band 7 family CHL1_000548 PF15975 Flotillin CHL1_000549 PF01381 Helix-turn-helix CHL1_000559 PF02384 N-6 DNA Methylase CHL1_000570 PF00589 Phage integrase family CHL1_000571 PF00589 Phage integrase family CHL1_000572 PF02899 Phage integrase, N-terminal SAM-like domain CHL1_000572 PF00589 Phage integrase family CHL1_000574 PF00390 Malic enzyme, N-terminal domain CHL1_000574 PF03949 Malic enzyme, NAD binding domain CHL1_000575 PF08459 UvrC Helix-hairpin-helix N-terminal CHL1_000575 PF02151 UvrB/uvrC motif CHL1_000575 PF12826 Helix-hairpin-helix motif CHL1_000575 PF01541 GIY-YIG catalytic domain CHL1_000579 PF00005 ABC transporter CHL1_000582 PF03928 Haem-degrading CHL1_000585 PF00293 NUDIX domain CHL1_000587 PF00892 EamA-like transporter family CHL1_000599 PF00589 Phage integrase family CHL1_000599 PF13495 Phage integrase, N-terminal SAM-like domain CHL1_000601 PF14480 DNA polymerase III polC-type N-terminus I CHL1_000601 PF11490 DNA polymerase III polC-type N-terminus II CHL1_000601 PF07733 Bacterial DNA polymerase III alpha NTPase domain CHL1_000601 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CHL1_000601 PF14579 Helix-hairpin-helix motif CHL1_000601 PF02811 PHP domain CHL1_000601 PF00929 Exonuclease CHL1_000601 PF01336 OB-fold nucleic acid binding domain CHL1_000614 PF01471 Putative peptidoglycan binding domain CHL1_000614 PF01183 Glycosyl hydrolases family 25 CHL1_000618 PF01568 Molydopterin dinucleotide binding domain CHL1_000618 PF00384 Molybdopterin oxidoreductase CHL1_000618 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CHL1_000618 PF12838 4Fe-4S dicluster domain CHL1_000618 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CHL1_000619 PF12804 MobA-like NTP transferase domain CHL1_000625 PF01487 Type I 3-dehydroquinase CHL1_000626 PF01569 PAP2 superfamily CHL1_000627 PF03167 Uracil DNA glycosylase superfamily CHL1_000628 PF08544 GHMP kinases C terminal CHL1_000628 PF00288 GHMP kinases N terminal domain CHL1_000629 PF07729 FCD domain CHL1_000629 PF00392 Bacterial regulatory proteins, gntR family CHL1_000630 PF01252 Signal peptidase (SPase) II CHL1_000631 PF01594 AI-2E family transporter CHL1_000632 PF00579 tRNA synthetases class I (W and Y) CHL1_000633 PF13393 Histidyl-tRNA synthetase CHL1_000634 PF01170 Putative RNA methylase family UPF0020 CHL1_000634 PF02926 THUMP domain CHL1_000635 PF00588 SpoU rRNA Methylase family CHL1_000635 PF08032 RNA 2'-O ribose methyltransferase substrate binding CHL1_000637 PF04542 Sigma-70 region 2 CHL1_000637 PF08281 Sigma-70, region 4 CHL1_000640 PF00009 Elongation factor Tu GTP binding domain CHL1_000640 PF03144 Elongation factor Tu domain 2 CHL1_000640 PF03143 Elongation factor Tu C-terminal domain CHL1_000641 PF02645 Uncharacterised protein, DegV family COG1307 CHL1_000642 PF00338 Ribosomal protein S10p/S20e CHL1_000643 PF00297 Ribosomal protein L3 CHL1_000644 PF00573 Ribosomal protein L4/L1 family CHL1_000645 PF00276 Ribosomal protein L23 CHL1_000646 PF00181 Ribosomal Proteins L2, RNA binding domain CHL1_000646 PF03947 Ribosomal Proteins L2, C-terminal domain CHL1_000647 PF00203 Ribosomal protein S19 CHL1_000648 PF00237 Ribosomal protein L22p/L17e CHL1_000649 PF07650 KH domain CHL1_000649 PF00189 Ribosomal protein S3, C-terminal domain CHL1_000650 PF00252 Ribosomal protein L16p/L10e CHL1_000651 PF00831 Ribosomal L29 protein CHL1_000652 PF00366 Ribosomal protein S17 CHL1_000653 PF00238 Ribosomal protein L14p/L23e CHL1_000654 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CHL1_000654 PF00467 KOW motif CHL1_000655 PF00281 Ribosomal protein L5 CHL1_000655 PF00673 ribosomal L5P family C-terminus CHL1_000656 PF00253 Ribosomal protein S14p/S29e CHL1_000657 PF00410 Ribosomal protein S8 CHL1_000658 PF00347 Ribosomal protein L6 CHL1_000659 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CHL1_000660 PF00333 Ribosomal protein S5, N-terminal domain CHL1_000660 PF03719 Ribosomal protein S5, C-terminal domain CHL1_000661 PF00327 Ribosomal protein L30p/L7e CHL1_000662 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CHL1_000663 PF00344 SecY translocase CHL1_000664 PF05191 Adenylate kinase, active site lid CHL1_000665 PF00557 Metallopeptidase family M24 CHL1_000667 PF01176 Translation initiation factor 1A / IF-1 CHL1_000668 PF00444 Ribosomal protein L36 CHL1_000669 PF00416 Ribosomal protein S13/S18 CHL1_000670 PF00411 Ribosomal protein S11 CHL1_000671 PF00163 Ribosomal protein S4/S9 N-terminal domain CHL1_000671 PF01479 S4 domain CHL1_000672 PF01000 RNA polymerase Rpb3/RpoA insert domain CHL1_000672 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CHL1_000672 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CHL1_000673 PF01196 Ribosomal protein L17 CHL1_000674 PF00005 ABC transporter CHL1_000675 PF00005 ABC transporter CHL1_000676 PF02361 Cobalt transport protein CHL1_000677 PF01416 tRNA pseudouridine synthase CHL1_000678 PF00572 Ribosomal protein L13 CHL1_000679 PF00380 Ribosomal protein S9/S16 CHL1_000680 PF03144 Elongation factor Tu domain 2 CHL1_000680 PF00009 Elongation factor Tu GTP binding domain CHL1_000680 PF00679 Elongation factor G C-terminus CHL1_000682 PF01594 AI-2E family transporter CHL1_000688 PF02457 DisA bacterial checkpoint controller nucleotide-binding CHL1_000690 PF00266 Aminotransferase class-V CHL1_000691 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CHL1_000691 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CHL1_000691 PF01842 ACT domain CHL1_000694 PF06968 Biotin and Thiamin Synthesis associated domain CHL1_000694 PF04055 Radical SAM superfamily CHL1_000696 PF13091 PLD-like domain CHL1_000696 PF13396 Phospholipase_D-nuclease N-terminal CHL1_000697 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CHL1_000697 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus CHL1_000699 PF07516 SecA Wing and Scaffold domain CHL1_000699 PF01043 SecA preprotein cross-linking domain CHL1_000699 PF07517 SecA DEAD-like domain CHL1_000699 PF02810 SEC-C motif CHL1_000700 PF03462 PCRF domain CHL1_000700 PF00472 RF-1 domain CHL1_000704 PF02310 B12 binding domain CHL1_000704 PF02607 B12 binding domain CHL1_000704 PF02965 Vitamin B12 dependent methionine synthase, activation domain CHL1_000704 PF00809 Pterin binding enzyme CHL1_000704 PF02574 Homocysteine S-methyltransferase CHL1_000705 PF13382 Adenine deaminase C-terminal domain CHL1_000705 PF01979 Amidohydrolase family CHL1_000706 PF01613 Flavin reductase like domain CHL1_000706 PF00301 Rubredoxin CHL1_000707 PF00440 Bacterial regulatory proteins, tetR family CHL1_000707 PF17938 Tetracyclin repressor-like, C-terminal domain CHL1_000708 PF07859 alpha/beta hydrolase fold CHL1_000709 PF00072 Response regulator receiver domain CHL1_000709 PF00158 Sigma-54 interaction domain CHL1_000709 PF02954 Bacterial regulatory protein, Fis family CHL1_000710 PF02954 Bacterial regulatory protein, Fis family CHL1_000710 PF13426 PAS domain CHL1_000710 PF00158 Sigma-54 interaction domain CHL1_000711 PF06253 Trimethylamine methyltransferase (MTTB) CHL1_000712 PF06253 Trimethylamine methyltransferase (MTTB) CHL1_000714 PF02028 BCCT, betaine/carnitine/choline family transporter CHL1_000715 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CHL1_000715 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CHL1_000716 PF02548 Ketopantoate hydroxymethyltransferase CHL1_000717 PF02607 B12 binding domain CHL1_000717 PF02310 B12 binding domain CHL1_000720 PF02310 B12 binding domain CHL1_000720 PF02607 B12 binding domain CHL1_000722 PF02492 CobW/HypB/UreG, nucleotide-binding domain CHL1_000722 PF07683 Cobalamin synthesis protein cobW C-terminal domain CHL1_000724 PF13520 Amino acid permease CHL1_000725 PF08448 PAS fold CHL1_000725 PF08447 PAS fold CHL1_000725 PF00563 EAL domain CHL1_000725 PF00990 Diguanylate cyclase, GGDEF domain CHL1_000726 PF02780 Transketolase, C-terminal domain CHL1_000726 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CHL1_000726 PF02779 Transketolase, pyrimidine binding domain CHL1_000727 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CHL1_000727 PF02779 Transketolase, pyrimidine binding domain CHL1_000727 PF02780 Transketolase, C-terminal domain CHL1_000729 PF12728 Helix-turn-helix domain CHL1_000729 PF12727 PBP superfamily domain CHL1_000732 PF00528 Binding-protein-dependent transport system inner membrane component CHL1_000733 PF08402 TOBE domain CHL1_000733 PF00005 ABC transporter CHL1_000735 PF02445 Quinolinate synthetase A protein CHL1_000736 PF00890 FAD binding domain CHL1_000737 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CHL1_000737 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CHL1_000739 PF04055 Radical SAM superfamily CHL1_000741 PF13426 PAS domain CHL1_000741 PF00158 Sigma-54 interaction domain CHL1_000741 PF02954 Bacterial regulatory protein, Fis family CHL1_000742 PF01910 Thiamine-binding protein CHL1_000744 PF00528 Binding-protein-dependent transport system inner membrane component CHL1_000745 PF09084 NMT1/THI5 like CHL1_000746 PF00005 ABC transporter CHL1_000749 PF00676 Dehydrogenase E1 component CHL1_000750 PF02780 Transketolase, C-terminal domain CHL1_000750 PF02779 Transketolase, pyrimidine binding domain CHL1_000751 PF01513 ATP-NAD kinase CHL1_000752 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CHL1_000752 PF00364 Biotin-requiring enzyme CHL1_000752 PF02817 e3 binding domain CHL1_000753 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CHL1_000753 PF07992 Pyridine nucleotide-disulphide oxidoreductase CHL1_000754 PF02261 Aspartate decarboxylase CHL1_000755 PF02569 Pantoate-beta-alanine ligase CHL1_000756 PF02548 Ketopantoate hydroxymethyltransferase CHL1_000758 PF01544 CorA-like Mg2+ transporter protein CHL1_000761 PF00860 Permease family CHL1_000762 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CHL1_000762 PF01488 Shikimate / quinate 5-dehydrogenase CHL1_000762 PF08501 Shikimate dehydrogenase substrate binding domain CHL1_000763 PF01202 Shikimate kinase CHL1_000768 PF05036 Sporulation related domain CHL1_000768 PF01520 N-acetylmuramoyl-L-alanine amidase CHL1_000777 PF01464 Transglycosylase SLT domain CHL1_000777 PF01551 Peptidase family M23 CHL1_000777 PF10145 Phage-related minor tail protein CHL1_000790 PF10668 Phage terminase small subunit CHL1_000819 PF01726 LexA DNA binding domain CHL1_000819 PF00717 Peptidase S24-like CHL1_000821 PF00589 Phage integrase family CHL1_000821 PF14659 Phage integrase, N-terminal SAM-like domain CHL1_000823 PF03063 Prismane/CO dehydrogenase family CHL1_000826 PF13514 AAA domain CHL1_000829 PF04060 Putative Fe-S cluster CHL1_000833 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHL1_000833 PF00512 His Kinase A (phospho-acceptor) domain CHL1_000835 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CHL1_000835 PF00037 4Fe-4S binding domain CHL1_000835 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CHL1_000836 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CHL1_000836 PF00037 4Fe-4S binding domain CHL1_000836 PF02256 Iron hydrogenase small subunit CHL1_000836 PF02906 Iron only hydrogenase large subunit, C-terminal domain CHL1_000837 PF14490 Helix-hairpin-helix containing domain CHL1_000837 PF13538 UvrD-like helicase C-terminal domain CHL1_000837 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain CHL1_000838 PF00156 Phosphoribosyl transferase domain CHL1_000839 PF01565 FAD binding domain CHL1_000839 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CHL1_000842 PF03668 P-loop ATPase protein family CHL1_000843 PF01933 Uncharacterised protein family UPF0052 CHL1_000844 PF10298 WhiA N-terminal LAGLIDADG-like domain CHL1_000844 PF14527 WhiA LAGLIDADG-like domain CHL1_000844 PF02650 WhiA C-terminal HTH domain CHL1_000845 PF05105 Bacteriophage holin family CHL1_000850 PF00672 HAMP domain CHL1_000850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CHL1_000850 PF02743 Cache domain CHL1_000856 PF02899 Phage integrase, N-terminal SAM-like domain CHL1_000856 PF00589 Phage integrase family CHL1_000857 PF04002 RadC-like JAB domain CHL1_000860 PF00589 Phage integrase family CHL1_000860 PF02899 Phage integrase, N-terminal SAM-like domain CHL1_000866 PF01695 IstB-like ATP binding protein CHL1_000873 PF00171 Aldehyde dehydrogenase family CHL1_000874 PF13350 Tyrosine phosphatase family CHL1_000875 PF06969 HemN C-terminal domain CHL1_000875 PF04055 Radical SAM superfamily CHL1_000876 PF01628 HrcA protein C terminal domain CHL1_000877 PF01025 GrpE CHL1_000878 PF00012 Hsp70 protein CHL1_000879 PF00684 DnaJ central domain CHL1_000879 PF00226 DnaJ domain CHL1_000879 PF01556 DnaJ C terminal domain CHL1_000880 PF02082 Transcriptional regulator CHL1_000882 PF01636 Phosphotransferase enzyme family CHL1_000883 PF10662 Ethanolamine utilisation - propanediol utilisation CHL1_000884 PF00936 BMC domain CHL1_000886 PF04452 RNA methyltransferase CHL1_000887 PF04055 Radical SAM superfamily CHL1_000887 PF01938 TRAM domain CHL1_000887 PF00919 Uncharacterized protein family UPF0004 CHL1_000888 PF01230 HIT domain CHL1_000889 PF01165 Ribosomal protein S21 CHL1_000890 PF09424 Yqey-like protein CHL1_000896 PF01551 Peptidase family M23 CHL1_000896 PF08460 Bacterial SH3 domain CHL1_000898 PF02631 RecX family CHL1_000901 PF00155 Aminotransferase class I and II CHL1_000901 PF00392 Bacterial regulatory proteins, gntR family CHL1_000903 PF07963 Prokaryotic N-terminal methylation motif CHL1_000903 PF08334 Type II secretion system (T2SS), protein G CHL1_000904 PF12019 Type II transport protein GspH CHL1_000904 PF07963 Prokaryotic N-terminal methylation motif CHL1_000913 PF01047 MarR family CHL1_000914 PF02608 ABC transporter substrate-binding protein PnrA-like CHL1_000915 PF00005 ABC transporter CHL1_000916 PF02653 Branched-chain amino acid transport system / permease component CHL1_000917 PF02653 Branched-chain amino acid transport system / permease component CHL1_000918 PF01761 3-dehydroquinate synthase CHL1_000919 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CHL1_000920 PF01264 Chorismate synthase CHL1_000923 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CHL1_000923 PF02785 Biotin carboxylase C-terminal domain CHL1_000923 PF00289 Biotin carboxylase, N-terminal domain CHL1_000923 PF00364 Biotin-requiring enzyme CHL1_000923 PF00682 HMGL-like CHL1_000923 PF02436 Conserved carboxylase domain CHL1_000925 PF01740 STAS domain CHL1_000928 PF00005 ABC transporter CHL1_000928 PF00664 ABC transporter transmembrane region CHL1_000929 PF00005 ABC transporter CHL1_000929 PF00664 ABC transporter transmembrane region CHL1_000930 PF18030 RimK PreATP-grasp domain CHL1_000930 PF08443 RimK-like ATP-grasp domain CHL1_000931 PF08443 RimK-like ATP-grasp domain CHL1_000931 PF18030 RimK PreATP-grasp domain CHL1_000933 PF01590 GAF domain CHL1_000933 PF00563 EAL domain CHL1_000933 PF00360 Phytochrome region CHL1_000933 PF00990 Diguanylate cyclase, GGDEF domain CHL1_000935 PF02743 Cache domain CHL1_000935 PF00672 HAMP domain CHL1_000935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHL1_000935 PF06580 Histidine kinase CHL1_000936 PF00072 Response regulator receiver domain CHL1_000937 PF00936 BMC domain CHL1_000938 PF00936 BMC domain CHL1_000939 PF02286 Dehydratase large subunit CHL1_000940 PF02288 Dehydratase medium subunit CHL1_000941 PF02287 Dehydratase small subunit CHL1_000942 PF08841 Diol dehydratase reactivase ATPase-like domain CHL1_000942 PF18427 DD-reactivating factor swiveling domain CHL1_000945 PF06130 Phosphate propanoyltransferase CHL1_000948 PF03319 Ethanolamine utilisation protein EutN/carboxysome CHL1_000949 PF01923 Cobalamin adenosyltransferase CHL1_000950 PF03928 Haem-degrading CHL1_000951 PF00171 Aldehyde dehydrogenase family CHL1_000952 PF13375 RnfC Barrel sandwich hybrid domain CHL1_000952 PF12838 4Fe-4S dicluster domain CHL1_000952 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CHL1_000952 PF10531 SLBB domain CHL1_000956 PF12169 DNA polymerase III subunits gamma and tau domain III CHL1_000957 PF02575 YbaB/EbfC DNA-binding family CHL1_000958 PF00633 Helix-hairpin-helix motif CHL1_000958 PF02132 RecR protein CHL1_000958 PF13662 Toprim domain CHL1_000959 PF02896 PEP-utilising enzyme, TIM barrel domain CHL1_000959 PF00391 PEP-utilising enzyme, mobile domain CHL1_000959 PF05524 PEP-utilising enzyme, N-terminal CHL1_000960 PF00381 PTS HPr component phosphorylation site CHL1_000963 PF01740 STAS domain CHL1_000964 PF13581 Histidine kinase-like ATPase domain CHL1_000965 PF04542 Sigma-70 region 2 CHL1_000965 PF04539 Sigma-70 region 3 CHL1_000965 PF04545 Sigma-70, region 4 CHL1_000966 PF00009 Elongation factor Tu GTP binding domain CHL1_000966 PF03144 Elongation factor Tu domain 2 CHL1_000966 PF14492 Elongation Factor G, domain II CHL1_000966 PF00679 Elongation factor G C-terminus CHL1_000966 PF03764 Elongation factor G, domain IV CHL1_000967 PF00156 Phosphoribosyl transferase domain CHL1_000968 PF01177 Asp/Glu/Hydantoin racemase CHL1_000969 PF00579 tRNA synthetases class I (W and Y) CHL1_000970 PF12705 PD-(D/E)XK nuclease superfamily CHL1_000971 PF12705 PD-(D/E)XK nuclease superfamily CHL1_000971 PF00580 UvrD/REP helicase N-terminal domain CHL1_000971 PF13361 UvrD-like helicase C-terminal domain CHL1_000974 PF00082 Subtilase family CHL1_000979 PF00005 ABC transporter CHL1_000979 PF08402 TOBE domain CHL1_000980 PF01042 Endoribonuclease L-PSP CHL1_000982 PF01255 Putative undecaprenyl diphosphate synthase CHL1_000984 PF02163 Peptidase family M50 CHL1_000984 PF17820 PDZ domain CHL1_000985 PF04551 GcpE protein CHL1_000986 PF11490 DNA polymerase III polC-type N-terminus II CHL1_000986 PF07733 Bacterial DNA polymerase III alpha NTPase domain CHL1_000986 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CHL1_000986 PF14579 Helix-hairpin-helix motif CHL1_000986 PF02811 PHP domain CHL1_000986 PF00929 Exonuclease CHL1_000987 PF00929 Exonuclease CHL1_000987 PF07733 Bacterial DNA polymerase III alpha NTPase domain CHL1_000987 PF14579 Helix-hairpin-helix motif CHL1_000987 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CHL1_000987 PF11490 DNA polymerase III polC-type N-terminus II CHL1_000987 PF02811 PHP domain CHL1_000990 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CHL1_000990 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CHL1_000990 PF13288 DXP reductoisomerase C-terminal domain CHL1_000991 PF00465 Iron-containing alcohol dehydrogenase CHL1_000992 PF01464 Transglycosylase SLT domain CHL1_000992 PF10145 Phage-related minor tail protein CHL1_000992 PF01551 Peptidase family M23 CHL1_000993 PF00005 ABC transporter CHL1_000994 PF18075 FtsX extracellular domain CHL1_000994 PF02687 FtsX-like permease family CHL1_000995 PF01464 Transglycosylase SLT domain CHL1_000995 PF10145 Phage-related minor tail protein CHL1_000995 PF01551 Peptidase family M23 CHL1_000996 PF01471 Putative peptidoglycan binding domain CHL1_000996 PF03572 Peptidase family S41 CHL1_000996 PF17820 PDZ domain CHL1_000997 PF00271 Helicase conserved C-terminal domain CHL1_000997 PF17757 UvrB interaction domain CHL1_000997 PF12344 Ultra-violet resistance protein B CHL1_000997 PF02151 UvrB/uvrC motif CHL1_000997 PF04851 Type III restriction enzyme, res subunit CHL1_000998 PF17755 UvrA DNA-binding domain CHL1_000998 PF17760 UvrA interaction domain CHL1_001000 PF07664 Ferrous iron transport protein B C terminus CHL1_001000 PF17910 FeoB cytosolic helical domain CHL1_001000 PF07670 Nucleoside recognition CHL1_001000 PF02421 Ferrous iron transport protein B CHL1_001001 PF07664 Ferrous iron transport protein B C terminus CHL1_001001 PF07670 Nucleoside recognition CHL1_001001 PF02421 Ferrous iron transport protein B CHL1_001001 PF17910 FeoB cytosolic helical domain CHL1_001003 PF00313 'Cold-shock' DNA-binding domain CHL1_001005 PF01541 GIY-YIG catalytic domain CHL1_001005 PF02151 UvrB/uvrC motif CHL1_001005 PF08459 UvrC Helix-hairpin-helix N-terminal CHL1_001006 PF07475 HPr Serine kinase C-terminal domain CHL1_001006 PF02603 HPr Serine kinase N terminus CHL1_001008 PF02645 Uncharacterised protein, DegV family COG1307 CHL1_001009 PF03462 PCRF domain CHL1_001009 PF00472 RF-1 domain CHL1_001011 PF03129 Anticodon binding domain CHL1_001011 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CHL1_001012 PF02690 Na+/Pi-cotransporter CHL1_001014 PF03963 Flagellar hook capping protein - N-terminal region CHL1_001016 PF07559 Flagellar basal body protein FlaE CHL1_001016 PF00460 Flagella basal body rod protein CHL1_001016 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CHL1_001018 PF01618 MotA/TolQ/ExbB proton channel family CHL1_001019 PF13677 Membrane MotB of proton-channel complex MotA/MotB CHL1_001019 PF00691 OmpA family CHL1_001020 PF02154 Flagellar motor switch protein FliM CHL1_001020 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CHL1_001021 PF04509 CheC-like family CHL1_001021 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CHL1_001022 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CHL1_001023 PF00072 Response regulator receiver domain CHL1_001024 PF04347 Flagellar biosynthesis protein, FliO CHL1_001024 PF00813 FliP family CHL1_001025 PF00813 FliP family CHL1_001026 PF01313 Bacterial export proteins, family 3 CHL1_001027 PF01311 Bacterial export proteins, family 1 CHL1_001028 PF01312 FlhB HrpN YscU SpaS Family CHL1_001029 PF00771 FHIPEP family CHL1_001030 PF04545 Sigma-70, region 4 CHL1_001030 PF04539 Sigma-70 region 3 CHL1_001030 PF04542 Sigma-70 region 2 CHL1_001031 PF00460 Flagella basal body rod protein CHL1_001031 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CHL1_001032 PF00460 Flagella basal body rod protein CHL1_001032 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CHL1_001034 PF04509 CheC-like family CHL1_001035 PF03975 CheD chemotactic sensory transduction CHL1_001036 PF01584 CheW-like domain CHL1_001037 PF01339 CheB methylesterase CHL1_001037 PF00072 Response regulator receiver domain CHL1_001040 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CHL1_001040 PF00460 Flagella basal body rod protein CHL1_001041 PF00700 Bacterial flagellin C-terminal helical region CHL1_001041 PF00669 Bacterial flagellin N-terminal helical region CHL1_001043 PF00669 Bacterial flagellin N-terminal helical region CHL1_001043 PF00700 Bacterial flagellin C-terminal helical region CHL1_001044 PF00535 Glycosyl transferase family 2 CHL1_001048 PF00483 Nucleotidyl transferase CHL1_001049 PF00535 Glycosyl transferase family 2 CHL1_001050 PF00132 Bacterial transferase hexapeptide (six repeats) CHL1_001052 PF04055 Radical SAM superfamily CHL1_001052 PF06463 Molybdenum Cofactor Synthesis C CHL1_001054 PF04055 Radical SAM superfamily CHL1_001054 PF06463 Molybdenum Cofactor Synthesis C CHL1_001056 PF01501 Glycosyl transferase family 8 CHL1_001056 PF00535 Glycosyl transferase family 2 CHL1_001058 PF01312 FlhB HrpN YscU SpaS Family CHL1_001062 PF01627 Hpt domain CHL1_001062 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHL1_001062 PF07194 P2 response regulator binding domain CHL1_001062 PF01584 CheW-like domain CHL1_001062 PF02895 Signal transducing histidine kinase, homodimeric domain CHL1_001063 PF01739 CheR methyltransferase, SAM binding domain CHL1_001063 PF03705 CheR methyltransferase, all-alpha domain CHL1_001064 PF07195 Flagellar hook-associated protein 2 C-terminus CHL1_001064 PF02465 Flagellar hook-associated protein 2 N-terminus CHL1_001067 PF00460 Flagella basal body rod protein CHL1_001068 PF00460 Flagella basal body rod protein CHL1_001068 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CHL1_001069 PF02049 Flagellar hook-basal body complex protein FliE CHL1_001071 PF14841 FliG middle domain CHL1_001071 PF01706 FliG C-terminal domain CHL1_001071 PF14842 FliG N-terminal domain CHL1_001073 PF18269 T3SS EscN ATPase C-terminal domain CHL1_001073 PF02874 ATP synthase alpha/beta family, beta-barrel domain CHL1_001073 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CHL1_001075 PF07992 Pyridine nucleotide-disulphide oxidoreductase CHL1_001076 PF04552 Sigma-54, DNA binding domain CHL1_001076 PF00309 Sigma-54 factor, Activator interacting domain (AID) CHL1_001076 PF04963 Sigma-54 factor, core binding domain CHL1_001077 PF04198 Putative sugar-binding domain CHL1_001078 PF04198 Putative sugar-binding domain CHL1_001079 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CHL1_001079 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CHL1_001080 PF00162 Phosphoglycerate kinase CHL1_001081 PF00121 Triosephosphate isomerase CHL1_001082 PF01676 Metalloenzyme superfamily CHL1_001082 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CHL1_001083 PF03840 Preprotein translocase SecG subunit CHL1_001084 PF03030 Inorganic H+ pyrophosphatase CHL1_001086 PF00004 ATPase family associated with various cellular activities (AAA) CHL1_001086 PF07724 AAA domain (Cdc48 subfamily) CHL1_001086 PF17871 AAA lid domain CHL1_001086 PF02861 Clp amino terminal domain, pathogenicity island component CHL1_001086 PF10431 C-terminal, D2-small domain, of ClpB protein CHL1_001087 PF00465 Iron-containing alcohol dehydrogenase CHL1_001088 PF00248 Aldo/keto reductase family CHL1_001089 PF00342 Phosphoglucose isomerase CHL1_001090 PF00563 EAL domain CHL1_001090 PF00990 Diguanylate cyclase, GGDEF domain CHL1_001090 PF03707 Bacterial signalling protein N terminal repeat CHL1_001090 PF13188 PAS domain CHL1_001093 PF00180 Isocitrate/isopropylmalate dehydrogenase CHL1_001093 PF18324 Hypothetical protein TT1725 CHL1_001094 PF03976 Polyphosphate kinase 2 (PPK2) CHL1_001095 PF01037 Lrp/AsnC ligand binding domain CHL1_001096 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CHL1_001096 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CHL1_001097 PF01235 Sodium:alanine symporter family CHL1_001098 PF10371 Domain of unknown function CHL1_001098 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CHL1_001098 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CHL1_001098 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CHL1_001098 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CHL1_001100 PF10410 DnaB-helicase binding domain of primase CHL1_001100 PF08275 DNA primase catalytic core, N-terminal domain CHL1_001100 PF01807 CHC2 zinc finger CHL1_001101 PF04542 Sigma-70 region 2 CHL1_001101 PF03979 Sigma-70 factor, region 1.1 CHL1_001101 PF00140 Sigma-70 factor, region 1.2 CHL1_001101 PF04539 Sigma-70 region 3 CHL1_001101 PF04545 Sigma-70, region 4 CHL1_001102 PF04816 tRNA (adenine(22)-N(1))-methyltransferase CHL1_001103 PF01784 NIF3 (NGG1p interacting factor 3) CHL1_001105 PF02954 Bacterial regulatory protein, Fis family CHL1_001105 PF00158 Sigma-54 interaction domain CHL1_001105 PF00072 Response regulator receiver domain CHL1_001107 PF09370 Phosphoenolpyruvate hydrolase-like CHL1_001108 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CHL1_001108 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CHL1_001109 PF01869 BadF/BadG/BcrA/BcrD ATPase family CHL1_001110 PF00072 Response regulator receiver domain CHL1_001110 PF00486 Transcriptional regulatory protein, C terminal CHL1_001111 PF00672 HAMP domain CHL1_001111 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHL1_001111 PF00512 His Kinase A (phospho-acceptor) domain CHL1_001111 PF13426 PAS domain CHL1_001114 PF02424 ApbE family CHL1_001115 PF07687 Peptidase dimerisation domain CHL1_001115 PF01546 Peptidase family M20/M25/M40 CHL1_001116 PF13649 Methyltransferase domain CHL1_001133 PF02583 Metal-sensitive transcriptional repressor CHL1_001135 PF00403 Heavy-metal-associated domain CHL1_001139 PF00137 ATP synthase subunit C CHL1_001142 PF16886 ATPsynthase alpha/beta subunit N-term extension CHL1_001142 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CHL1_001142 PF02874 ATP synthase alpha/beta family, beta-barrel domain CHL1_001143 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CHL1_001143 PF02874 ATP synthase alpha/beta family, beta-barrel domain CHL1_001144 PF01813 ATP synthase subunit D CHL1_001146 PF14535 AMP-binding enzyme C-terminal domain CHL1_001146 PF00501 AMP-binding enzyme CHL1_001147 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CHL1_001147 PF00749 tRNA synthetases class I (E and Q), catalytic domain CHL1_001150 PF01541 GIY-YIG catalytic domain CHL1_001152 PF08245 Mur ligase middle domain CHL1_001152 PF08353 Domain of unknown function (DUF1727) CHL1_001155 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CHL1_001155 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CHL1_001155 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CHL1_001155 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CHL1_001156 PF01380 SIS domain CHL1_001157 PF00990 Diguanylate cyclase, GGDEF domain CHL1_001164 PF02310 B12 binding domain CHL1_001164 PF02607 B12 binding domain CHL1_001165 PF02203 Tar ligand binding domain homologue CHL1_001165 PF00672 HAMP domain CHL1_001165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CHL1_001166 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CHL1_001166 PF03466 LysR substrate binding domain CHL1_001167 PF03466 LysR substrate binding domain CHL1_001167 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CHL1_001169 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CHL1_001169 PF07992 Pyridine nucleotide-disulphide oxidoreductase CHL1_001172 PF01571 Aminomethyltransferase folate-binding domain CHL1_001173 PF01268 Formate--tetrahydrofolate ligase CHL1_001174 PF00334 Nucleoside diphosphate kinase CHL1_001176 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CHL1_001176 PF02203 Tar ligand binding domain homologue CHL1_001176 PF00672 HAMP domain CHL1_001179 PF13247 4Fe-4S dicluster domain CHL1_001180 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 CHL1_001180 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain CHL1_001181 PF02634 FdhD/NarQ family CHL1_001183 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CHL1_001183 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CHL1_001183 PF00037 4Fe-4S binding domain CHL1_001184 PF07992 Pyridine nucleotide-disulphide oxidoreductase CHL1_001184 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CHL1_001184 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CHL1_001186 PF07992 Pyridine nucleotide-disulphide oxidoreductase CHL1_001186 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CHL1_001187 PF13556 PucR C-terminal helix-turn-helix domain CHL1_001188 PF02371 Transposase IS116/IS110/IS902 family CHL1_001188 PF01548 Transposase CHL1_001189 PF03880 DbpA RNA binding domain CHL1_001189 PF00271 Helicase conserved C-terminal domain CHL1_001189 PF00270 DEAD/DEAH box helicase CHL1_001191 PF02824 TGS domain CHL1_001191 PF04607 Region found in RelA / SpoT proteins CHL1_001191 PF13291 ACT domain CHL1_001192 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CHL1_001193 PF00528 Binding-protein-dependent transport system inner membrane component CHL1_001194 PF00528 Binding-protein-dependent transport system inner membrane component CHL1_001194 PF12911 N-terminal TM domain of oligopeptide transport permease C CHL1_001195 PF00005 ABC transporter CHL1_001195 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CHL1_001196 PF00005 ABC transporter CHL1_001197 PF12849 PBP superfamily domain CHL1_001198 PF00528 Binding-protein-dependent transport system inner membrane component CHL1_001200 PF00005 ABC transporter CHL1_001201 PF01895 PhoU domain CHL1_001203 PF00990 Diguanylate cyclase, GGDEF domain CHL1_001203 PF08448 PAS fold CHL1_001205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CHL1_001205 PF00672 HAMP domain CHL1_001205 PF12729 Four helix bundle sensory module for signal transduction CHL1_001208 PF00990 Diguanylate cyclase, GGDEF domain CHL1_001209 PF01966 HD domain CHL1_001209 PF11871 Domain of unknown function (DUF3391) CHL1_001211 PF00361 Proton-conducting membrane transporter CHL1_001212 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CHL1_001215 PF03334 Na+/H+ antiporter subunit CHL1_001216 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) CHL1_001218 PF02203 Tar ligand binding domain homologue CHL1_001218 PF00672 HAMP domain CHL1_001218 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CHL1_001219 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CHL1_001219 PF02203 Tar ligand binding domain homologue CHL1_001219 PF00672 HAMP domain CHL1_001220 PF04012 PspA/IM30 family CHL1_001222 PF04073 Aminoacyl-tRNA editing domain CHL1_001223 PF00082 Subtilase family CHL1_001224 PF00563 EAL domain CHL1_001224 PF00990 Diguanylate cyclase, GGDEF domain CHL1_001224 PF03707 Bacterial signalling protein N terminal repeat CHL1_001227 PF12787 EcsC protein family CHL1_001228 PF07739 TipAS antibiotic-recognition domain CHL1_001228 PF13411 MerR HTH family regulatory protein CHL1_001230 PF00005 ABC transporter CHL1_001231 PF05532 CsbD-like CHL1_001232 PF01476 LysM domain CHL1_001232 PF05257 CHAP domain CHL1_001233 PF01384 Phosphate transporter family CHL1_001235 PF00582 Universal stress protein family CHL1_001236 PF00990 Diguanylate cyclase, GGDEF domain CHL1_001237 PF11849 Domain of unknown function (DUF3369) CHL1_001240 PF00149 Calcineurin-like phosphoesterase CHL1_001240 PF10518 TAT (twin-arginine translocation) pathway signal sequence CHL1_001242 PF02374 Anion-transporting ATPase CHL1_001242 PF17886 HSP20-like domain found in ArsA CHL1_001244 PF02374 Anion-transporting ATPase CHL1_001244 PF17886 HSP20-like domain found in ArsA CHL1_001245 PF00871 Acetokinase family CHL1_001246 PF02073 Thermophilic metalloprotease (M29) CHL1_001247 PF02743 Cache domain CHL1_001247 PF00672 HAMP domain CHL1_001247 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CHL1_001250 PF00689 Cation transporting ATPase, C-terminus CHL1_001250 PF00690 Cation transporter/ATPase, N-terminus CHL1_001255 PF04542 Sigma-70 region 2 CHL1_001255 PF08281 Sigma-70, region 4 CHL1_001258 PF00672 HAMP domain CHL1_001258 PF02203 Tar ligand binding domain homologue CHL1_001258 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CHL1_001259 PF12729 Four helix bundle sensory module for signal transduction CHL1_001259 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CHL1_001259 PF00672 HAMP domain CHL1_001260 PF13458 Periplasmic binding protein CHL1_001261 PF00563 EAL domain CHL1_001261 PF00498 FHA domain CHL1_001261 PF00990 Diguanylate cyclase, GGDEF domain CHL1_001262 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CHL1_001263 PF00563 EAL domain CHL1_001263 PF00990 Diguanylate cyclase, GGDEF domain CHL1_001263 PF03707 Bacterial signalling protein N terminal repeat CHL1_001264 PF03707 Bacterial signalling protein N terminal repeat CHL1_001264 PF00990 Diguanylate cyclase, GGDEF domain CHL1_001264 PF00563 EAL domain CHL1_001265 PF00528 Binding-protein-dependent transport system inner membrane component CHL1_001266 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CHL1_001267 PF00005 ABC transporter CHL1_001267 PF00571 CBS domain CHL1_001270 PF00005 ABC transporter CHL1_001271 PF00528 Binding-protein-dependent transport system inner membrane component CHL1_001272 PF00497 Bacterial extracellular solute-binding proteins, family 3 CHL1_001274 PF01381 Helix-turn-helix CHL1_001276 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CHL1_001276 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CHL1_001277 PF00689 Cation transporting ATPase, C-terminus CHL1_001277 PF00690 Cation transporter/ATPase, N-terminus CHL1_001278 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CHL1_001279 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CHL1_001280 PF00350 Dynamin family CHL1_001282 PF04262 Glutamate-cysteine ligase CHL1_001282 PF18419 ATP-grasp-like domain CHL1_001282 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CHL1_001284 PF00990 Diguanylate cyclase, GGDEF domain CHL1_001289 PF17820 PDZ domain CHL1_001289 PF13180 PDZ domain CHL1_001290 PF00990 Diguanylate cyclase, GGDEF domain CHL1_001290 PF08448 PAS fold CHL1_001291 PF01965 DJ-1/PfpI family CHL1_001292 PF00011 Hsp20/alpha crystallin family CHL1_001293 PF12801 4Fe-4S binding domain CHL1_001293 PF12837 4Fe-4S binding domain CHL1_001296 PF02384 N-6 DNA Methylase CHL1_001296 PF12161 HsdM N-terminal domain CHL1_001297 PF01541 GIY-YIG catalytic domain CHL1_001298 PF01420 Type I restriction modification DNA specificity domain CHL1_001299 PF12008 Type I restriction and modification enzyme - subunit R C terminal CHL1_001299 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CHL1_001299 PF18766 SWI2/SNF2 ATPase CHL1_001306 PF05105 Bacteriophage holin family CHL1_001308 PF00355 Rieske [2Fe-2S] domain CHL1_001313 PF00781 Diacylglycerol kinase catalytic domain CHL1_001314 PF13411 MerR HTH family regulatory protein CHL1_001315 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CHL1_001316 PF07992 Pyridine nucleotide-disulphide oxidoreductase CHL1_001316 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CHL1_001320 PF02954 Bacterial regulatory protein, Fis family CHL1_001320 PF00989 PAS fold CHL1_001320 PF00158 Sigma-54 interaction domain CHL1_001321 PF00158 Sigma-54 interaction domain CHL1_001321 PF02954 Bacterial regulatory protein, Fis family CHL1_001321 PF01590 GAF domain CHL1_001322 PF18537 Carbon monoxide dehydrogenase subunit alpha N-terminal domain CHL1_001322 PF03598 CO dehydrogenase/acetyl-CoA synthase complex beta subunit CHL1_001325 PF02492 CobW/HypB/UreG, nucleotide-binding domain CHL1_001327 PF02607 B12 binding domain CHL1_001327 PF02310 B12 binding domain CHL1_001329 PF00809 Pterin binding enzyme CHL1_001332 PF07702 UTRA domain CHL1_001332 PF00392 Bacterial regulatory proteins, gntR family CHL1_001339 PF11954 Domain of unknown function (DUF3471) CHL1_001339 PF00144 Beta-lactamase CHL1_001343 PF08448 PAS fold CHL1_001343 PF00990 Diguanylate cyclase, GGDEF domain CHL1_001349 PF13411 MerR HTH family regulatory protein CHL1_001349 PF07739 TipAS antibiotic-recognition domain CHL1_001350 PF00330 Aconitase family (aconitate hydratase) CHL1_001351 PF00694 Aconitase C-terminal domain CHL1_001354 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CHL1_001354 PF00672 HAMP domain CHL1_001354 PF02203 Tar ligand binding domain homologue CHL1_001355 PF01627 Hpt domain CHL1_001355 PF00072 Response regulator receiver domain CHL1_001355 PF00512 His Kinase A (phospho-acceptor) domain CHL1_001355 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CHL1_001355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHL1_001355 PF00672 HAMP domain CHL1_001356 PF00072 Response regulator receiver domain CHL1_001358 PF12146 Serine aminopeptidase, S33 CHL1_001359 PF00990 Diguanylate cyclase, GGDEF domain CHL1_001366 PF13411 MerR HTH family regulatory protein CHL1_001368 PF01209 ubiE/COQ5 methyltransferase family CHL1_001370 PF13302 Acetyltransferase (GNAT) domain CHL1_001371 PF02423 Ornithine cyclodeaminase/mu-crystallin family CHL1_001373 PF01266 FAD dependent oxidoreductase CHL1_001374 PF07992 Pyridine nucleotide-disulphide oxidoreductase CHL1_001374 PF04324 BFD-like [2Fe-2S] binding domain CHL1_001375 PF04324 BFD-like [2Fe-2S] binding domain CHL1_001375 PF07992 Pyridine nucleotide-disulphide oxidoreductase CHL1_001377 PF01042 Endoribonuclease L-PSP CHL1_001380 PF00672 HAMP domain CHL1_001380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CHL1_001380 PF12729 Four helix bundle sensory module for signal transduction CHL1_001387 PF07690 Major Facilitator Superfamily CHL1_001388 PF12848 ABC transporter CHL1_001388 PF00005 ABC transporter CHL1_001390 PF00004 ATPase family associated with various cellular activities (AAA) CHL1_001390 PF06480 FtsH Extracellular CHL1_001390 PF01434 Peptidase family M41 CHL1_001390 PF17862 AAA+ lid domain CHL1_001391 PF01795 MraW methylase family CHL1_001392 PF07992 Pyridine nucleotide-disulphide oxidoreductase CHL1_001392 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CHL1_001397 PF00005 ABC transporter CHL1_001403 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CHL1_001403 PF01842 ACT domain CHL1_001403 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CHL1_001406 PF00398 Ribosomal RNA adenine dimethylase CHL1_001407 PF13732 Domain of unknown function (DUF4162) CHL1_001407 PF00005 ABC transporter CHL1_001409 PF01557 Fumarylacetoacetate (FAA) hydrolase family CHL1_001410 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CHL1_001410 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CHL1_001411 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain CHL1_001411 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain CHL1_001412 PF01979 Amidohydrolase family CHL1_001413 PF01979 Amidohydrolase family CHL1_001414 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CHL1_001415 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CHL1_001416 PF01180 Dihydroorotate dehydrogenase CHL1_001417 PF00156 Phosphoribosyl transferase domain CHL1_001418 PF01965 DJ-1/PfpI family CHL1_001419 PF00563 EAL domain CHL1_001419 PF01590 GAF domain CHL1_001419 PF00990 Diguanylate cyclase, GGDEF domain CHL1_001419 PF00360 Phytochrome region CHL1_001420 PF00672 HAMP domain CHL1_001420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CHL1_001420 PF02203 Tar ligand binding domain homologue CHL1_001423 PF01212 Beta-eliminating lyase CHL1_001424 PF01966 HD domain CHL1_001425 PF01966 HD domain CHL1_001426 PF02203 Tar ligand binding domain homologue CHL1_001426 PF00672 HAMP domain CHL1_001426 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CHL1_001427 PF00672 HAMP domain CHL1_001427 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CHL1_001427 PF02203 Tar ligand binding domain homologue CHL1_001432 PF00072 Response regulator receiver domain CHL1_001434 PF00586 AIR synthase related protein, N-terminal domain CHL1_001434 PF02769 AIR synthase related protein, C-terminal domain CHL1_001434 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CHL1_001435 PF00731 AIR carboxylase CHL1_001436 PF01259 SAICAR synthetase CHL1_001437 PF00156 Phosphoribosyl transferase domain CHL1_001438 PF00586 AIR synthase related protein, N-terminal domain CHL1_001438 PF02769 AIR synthase related protein, C-terminal domain CHL1_001439 PF00551 Formyl transferase CHL1_001440 PF01808 AICARFT/IMPCHase bienzyme CHL1_001440 PF02142 MGS-like domain CHL1_001441 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CHL1_001441 PF02843 Phosphoribosylglycinamide synthetase, C domain CHL1_001441 PF02844 Phosphoribosylglycinamide synthetase, N domain CHL1_001442 PF03807 NADP oxidoreductase coenzyme F420-dependent CHL1_001442 PF14748 Pyrroline-5-carboxylate reductase dimerisation CHL1_001443 PF00933 Glycosyl hydrolase family 3 N terminal domain CHL1_001443 PF14310 Fibronectin type III-like domain CHL1_001443 PF01915 Glycosyl hydrolase family 3 C-terminal domain CHL1_001444 PF00814 Glycoprotease family CHL1_001447 PF00814 Glycoprotease family CHL1_001448 PF00166 Chaperonin 10 Kd subunit CHL1_001449 PF00118 TCP-1/cpn60 chaperonin family CHL1_001451 PF00005 ABC transporter CHL1_001451 PF12848 ABC transporter CHL1_001451 PF16326 ABC transporter C-terminal domain CHL1_001452 PF02629 CoA binding domain CHL1_001452 PF06971 Putative DNA-binding protein N-terminus CHL1_001453 PF01381 Helix-turn-helix CHL1_001455 PF01368 DHH family CHL1_001455 PF02833 DHHA2 domain CHL1_001455 PF07085 DRTGG domain CHL1_001455 PF00571 CBS domain CHL1_001458 PF00753 Metallo-beta-lactamase superfamily CHL1_001458 PF13567 Domain of unknown function (DUF4131) CHL1_001458 PF03772 Competence protein CHL1_001459 PF06144 DNA polymerase III, delta subunit CHL1_001460 PF01649 Ribosomal protein S20 CHL1_001461 PF14492 Elongation Factor G, domain II CHL1_001461 PF00009 Elongation factor Tu GTP binding domain CHL1_001461 PF03144 Elongation factor Tu domain 2 CHL1_001461 PF06421 GTP-binding protein LepA C-terminus CHL1_001461 PF00679 Elongation factor G C-terminus CHL1_001462 PF01791 DeoC/LacD family aldolase CHL1_001463 PF02733 Dak1 domain CHL1_001465 PF02734 DAK2 domain CHL1_001466 PF13936 Helix-turn-helix domain CHL1_001466 PF04198 Putative sugar-binding domain CHL1_001467 PF00455 DeoR C terminal sensor domain CHL1_001467 PF08220 DeoR-like helix-turn-helix domain CHL1_001469 PF02607 B12 binding domain CHL1_001469 PF02310 B12 binding domain CHL1_001471 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CHL1_001471 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CHL1_001472 PF02733 Dak1 domain CHL1_001473 PF00072 Response regulator receiver domain CHL1_001473 PF04397 LytTr DNA-binding domain CHL1_001475 PF13936 Helix-turn-helix domain CHL1_001475 PF04198 Putative sugar-binding domain CHL1_001477 PF04011 LemA family CHL1_001478 PF13419 Haloacid dehalogenase-like hydrolase CHL1_001480 PF02915 Rubrerythrin CHL1_001482 PF01168 Alanine racemase, N-terminal domain CHL1_001483 PF08264 Anticodon-binding domain of tRNA CHL1_001483 PF00133 tRNA synthetases class I (I, L, M and V) CHL1_001483 PF13603 Leucyl-tRNA synthetase, Domain 2 CHL1_001483 PF09334 tRNA synthetases class I (M) CHL1_001484 PF00075 RNase H CHL1_001485 PF02645 Uncharacterised protein, DegV family COG1307 CHL1_001486 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase CHL1_001486 PF04101 Glycosyltransferase family 28 C-terminal domain CHL1_001489 PF16199 Radical_SAM C-terminal domain CHL1_001489 PF04055 Radical SAM superfamily CHL1_001490 PF04607 Region found in RelA / SpoT proteins CHL1_001491 PF01709 Transcriptional regulator CHL1_001493 PF01256 Carbohydrate kinase CHL1_001493 PF03853 YjeF-related protein N-terminus CHL1_001494 PF16916 Dimerisation domain of Zinc Transporter CHL1_001494 PF01545 Cation efflux family CHL1_001495 PF02796 Helix-turn-helix domain of resolvase CHL1_001495 PF00239 Resolvase, N terminal domain CHL1_001500 PF01381 Helix-turn-helix CHL1_001503 PF02498 BRO family, N-terminal domain CHL1_001503 PF10548 P22AR C-terminal domain CHL1_001505 PF01381 Helix-turn-helix CHL1_001515 PF00436 Single-strand binding protein family CHL1_001517 PF01695 IstB-like ATP binding protein CHL1_001526 PF01381 Helix-turn-helix CHL1_001526 PF00145 C-5 cytosine-specific DNA methylase CHL1_001536 PF03592 Terminase small subunit CHL1_001536 PF10668 Phage terminase small subunit CHL1_001549 PF00665 Integrase core domain CHL1_001549 PF13333 Integrase core domain CHL1_001549 PF13276 HTH-like domain CHL1_001568 PF05036 Sporulation related domain CHL1_001568 PF01520 N-acetylmuramoyl-L-alanine amidase CHL1_001575 PF00919 Uncharacterized protein family UPF0004 CHL1_001575 PF04055 Radical SAM superfamily CHL1_001575 PF01938 TRAM domain CHL1_001576 PF01624 MutS domain I CHL1_001576 PF05188 MutS domain II CHL1_001576 PF05192 MutS domain III CHL1_001576 PF05190 MutS family domain IV CHL1_001576 PF00488 MutS domain V CHL1_001577 PF00773 RNB domain CHL1_001577 PF17876 Cold shock domain CHL1_001577 PF08206 Ribonuclease B OB domain CHL1_001577 PF00575 S1 RNA binding domain CHL1_001578 PF01668 SmpB protein CHL1_001581 PF07683 Cobalamin synthesis protein cobW C-terminal domain CHL1_001581 PF02492 CobW/HypB/UreG, nucleotide-binding domain CHL1_001586 PF00990 Diguanylate cyclase, GGDEF domain CHL1_001587 PF00990 Diguanylate cyclase, GGDEF domain CHL1_001588 PF13291 ACT domain CHL1_001588 PF02824 TGS domain CHL1_001588 PF04607 Region found in RelA / SpoT proteins CHL1_001589 PF13556 PucR C-terminal helix-turn-helix domain CHL1_001589 PF17853 GGDEF-like domain CHL1_001589 PF06018 CodY GAF-like domain CHL1_001592 PF00202 Aminotransferase class-III CHL1_001593 PF00465 Iron-containing alcohol dehydrogenase CHL1_001594 PF01381 Helix-turn-helix CHL1_001594 PF07883 Cupin domain CHL1_001595 PF00202 Aminotransferase class-III CHL1_001596 PF13520 Amino acid permease CHL1_001597 PF00465 Iron-containing alcohol dehydrogenase CHL1_001600 PF03707 Bacterial signalling protein N terminal repeat CHL1_001600 PF00563 EAL domain CHL1_001600 PF00990 Diguanylate cyclase, GGDEF domain CHL1_001601 PF00563 EAL domain CHL1_001601 PF10388 EAL-domain associated signalling protein domain CHL1_001603 PF00990 Diguanylate cyclase, GGDEF domain CHL1_001603 PF00563 EAL domain CHL1_001603 PF03707 Bacterial signalling protein N terminal repeat CHL1_001604 PF01814 Hemerythrin HHE cation binding domain CHL1_001608 PF00563 EAL domain CHL1_001608 PF08668 HDOD domain CHL1_001609 PF00563 EAL domain CHL1_001609 PF08668 HDOD domain CHL1_001611 PF01699 Sodium/calcium exchanger protein CHL1_001612 PF06983 3-demethylubiquinone-9 3-methyltransferase CHL1_001613 PF00375 Sodium:dicarboxylate symporter family CHL1_001614 PF01554 MatE CHL1_001617 PF00990 Diguanylate cyclase, GGDEF domain CHL1_001618 PF00563 EAL domain CHL1_001618 PF03707 Bacterial signalling protein N terminal repeat CHL1_001618 PF00990 Diguanylate cyclase, GGDEF domain CHL1_001619 PF02554 Carbon starvation protein CstA CHL1_001620 PF03306 Alpha-acetolactate decarboxylase CHL1_001621 PF00155 Aminotransferase class I and II CHL1_001621 PF00392 Bacterial regulatory proteins, gntR family CHL1_001622 PF00892 EamA-like transporter family CHL1_001625 PF01206 Sulfurtransferase TusA CHL1_001626 PF13686 DsrE/DsrF/DrsH-like family CHL1_001627 PF00266 Aminotransferase class-V CHL1_001628 PF04324 BFD-like [2Fe-2S] binding domain CHL1_001628 PF01106 NifU-like domain CHL1_001628 PF01592 NifU-like N terminal domain CHL1_001630 PF01613 Flavin reductase like domain CHL1_001631 PF01063 Amino-transferase class IV CHL1_001632 PF04286 Protein of unknown function (DUF445) CHL1_001635 PF00005 ABC transporter CHL1_001636 PF01436 NHL repeat CHL1_001636 PF00069 Protein kinase domain CHL1_001636 PF08450 SMP-30/Gluconolactonase/LRE-like region CHL1_001638 PF13649 Methyltransferase domain CHL1_001640 PF03553 Na+/H+ antiporter family CHL1_001643 PF00334 Nucleoside diphosphate kinase CHL1_001644 PF01235 Sodium:alanine symporter family CHL1_001646 PF00829 Ribosomal prokaryotic L21 protein CHL1_001647 PF04327 Cysteine protease Prp CHL1_001648 PF01016 Ribosomal L27 protein CHL1_001649 PF01018 GTP1/OBG CHL1_001649 PF01926 50S ribosome-binding GTPase CHL1_001649 PF09269 Domain of unknown function (DUF1967) CHL1_001651 PF01467 Cytidylyltransferase-like CHL1_001652 PF01966 HD domain CHL1_001654 PF01926 50S ribosome-binding GTPase CHL1_001654 PF06071 Protein of unknown function (DUF933) CHL1_001656 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CHL1_001656 PF03129 Anticodon binding domain CHL1_001656 PF02824 TGS domain CHL1_001656 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CHL1_001658 PF02653 Branched-chain amino acid transport system / permease component CHL1_001659 PF08402 TOBE domain CHL1_001659 PF00005 ABC transporter CHL1_001660 PF00707 Translation initiation factor IF-3, C-terminal domain CHL1_001660 PF05198 Translation initiation factor IF-3, N-terminal domain CHL1_001661 PF01632 Ribosomal protein L35 CHL1_001662 PF00453 Ribosomal protein L20 CHL1_001663 PF02386 Cation transport protein CHL1_001664 PF02080 TrkA-C domain CHL1_001664 PF02254 TrkA-N domain CHL1_001665 PF00588 SpoU rRNA Methylase family CHL1_001665 PF08032 RNA 2'-O ribose methyltransferase substrate binding CHL1_001666 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CHL1_001666 PF01409 tRNA synthetases class II core domain (F) CHL1_001667 PF03483 B3/4 domain CHL1_001667 PF03484 tRNA synthetase B5 domain CHL1_001667 PF03147 Ferredoxin-fold anticodon binding domain CHL1_001667 PF01588 Putative tRNA binding domain CHL1_001667 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CHL1_001668 PF01588 Putative tRNA binding domain CHL1_001668 PF03484 tRNA synthetase B5 domain CHL1_001668 PF03147 Ferredoxin-fold anticodon binding domain CHL1_001668 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CHL1_001668 PF03483 B3/4 domain CHL1_001671 PF00717 Peptidase S24-like CHL1_001671 PF01726 LexA DNA binding domain CHL1_001672 PF02899 Phage integrase, N-terminal SAM-like domain CHL1_001672 PF00589 Phage integrase family CHL1_001677 PF00403 Heavy-metal-associated domain CHL1_001678 PF01022 Bacterial regulatory protein, arsR family CHL1_001679 PF00403 Heavy-metal-associated domain CHL1_001681 PF01022 Bacterial regulatory protein, arsR family CHL1_001685 PF03773 Predicted permease CHL1_001686 PF01022 Bacterial regulatory protein, arsR family CHL1_001688 PF06953 Arsenical resistance operon trans-acting repressor ArsD CHL1_001690 PF01022 Bacterial regulatory protein, arsR family CHL1_001693 PF02374 Anion-transporting ATPase CHL1_001694 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CHL1_001694 PF07992 Pyridine nucleotide-disulphide oxidoreductase CHL1_001695 PF00266 Aminotransferase class-V CHL1_001699 PF01597 Glycine cleavage H-protein CHL1_001702 PF01022 Bacterial regulatory protein, arsR family CHL1_001703 PF01451 Low molecular weight phosphotyrosine protein phosphatase CHL1_001704 PF01451 Low molecular weight phosphotyrosine protein phosphatase CHL1_001706 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CHL1_001706 PF01926 50S ribosome-binding GTPase CHL1_001711 PF00005 ABC transporter CHL1_001712 PF00497 Bacterial extracellular solute-binding proteins, family 3 CHL1_001713 PF00528 Binding-protein-dependent transport system inner membrane component CHL1_001714 PF00528 Binding-protein-dependent transport system inner membrane component CHL1_001715 PF01594 AI-2E family transporter CHL1_001717 PF17158 Membrane-associated sensor, integral membrane domain CHL1_001717 PF00990 Diguanylate cyclase, GGDEF domain CHL1_001718 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CHL1_001720 PF00753 Metallo-beta-lactamase superfamily CHL1_001727 PF02384 N-6 DNA Methylase CHL1_001734 PF08264 Anticodon-binding domain of tRNA CHL1_001734 PF00133 tRNA synthetases class I (I, L, M and V) CHL1_001734 PF10458 Valyl tRNA synthetase tRNA binding arm CHL1_001735 PF00534 Glycosyl transferases group 1 CHL1_001735 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase CHL1_001737 PF00696 Amino acid kinase family CHL1_001738 PF08471 Class II vitamin B12-dependent ribonucleotide reductase CHL1_001738 PF02867 Ribonucleotide reductase, barrel domain CHL1_001739 PF02660 Glycerol-3-phosphate acyltransferase CHL1_001743 PF01515 Phosphate acetyl/butaryl transferase CHL1_001744 PF00285 Citrate synthase, C-terminal domain CHL1_001747 PF13277 YmdB-like protein CHL1_001748 PF01966 HD domain CHL1_001748 PF00013 KH domain CHL1_001748 PF12072 Domain of unknown function (DUF3552) CHL1_001749 PF00154 recA bacterial DNA recombination protein CHL1_001750 PF02464 Competence-damaged protein CHL1_001750 PF18146 Damage-inducible protein CinA KH domain CHL1_001750 PF00994 Probable molybdopterin binding domain CHL1_001751 PF01066 CDP-alcohol phosphatidyltransferase CHL1_001752 PF04055 Radical SAM superfamily CHL1_001752 PF18693 TRAM domain CHL1_001752 PF00919 Uncharacterized protein family UPF0004 CHL1_001753 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CHL1_001753 PF09397 Ftsk gamma domain CHL1_001753 PF01580 FtsK/SpoIIIE family CHL1_001753 PF17854 FtsK alpha domain CHL1_001754 PF00692 dUTPase CHL1_001755 PF00575 S1 RNA binding domain CHL1_001755 PF00013 KH domain CHL1_001755 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CHL1_001755 PF01138 3' exoribonuclease family, domain 1 CHL1_001755 PF03725 3' exoribonuclease family, domain 2 CHL1_001756 PF00312 Ribosomal protein S15 CHL1_001757 PF06574 FAD synthetase CHL1_001757 PF01687 Riboflavin kinase CHL1_001758 PF01509 TruB family pseudouridylate synthase (N terminal domain) CHL1_001758 PF16198 tRNA pseudouridylate synthase B C-terminal domain CHL1_001759 PF01368 DHH family CHL1_001759 PF02272 DHHA1 domain CHL1_001760 PF02033 Ribosome-binding factor A CHL1_001761 PF00009 Elongation factor Tu GTP binding domain CHL1_001761 PF11987 Translation-initiation factor 2 CHL1_001761 PF04760 Translation initiation factor IF-2, N-terminal region CHL1_001762 PF04296 Protein of unknown function (DUF448) CHL1_001763 PF13184 NusA-like KH domain CHL1_001763 PF08529 NusA N-terminal domain CHL1_001763 PF00575 S1 RNA binding domain CHL1_001764 PF02576 RimP N-terminal domain CHL1_001764 PF17384 RimP C-terminal SH3 domain CHL1_001765 PF01765 Ribosome recycling factor CHL1_001766 PF00696 Amino acid kinase family CHL1_001767 PF00889 Elongation factor TS CHL1_001768 PF00318 Ribosomal protein S2 CHL1_001769 PF10431 C-terminal, D2-small domain, of ClpB protein CHL1_001769 PF07724 AAA domain (Cdc48 subfamily) CHL1_001769 PF00004 ATPase family associated with various cellular activities (AAA) CHL1_001770 PF10431 C-terminal, D2-small domain, of ClpB protein CHL1_001770 PF07724 AAA domain (Cdc48 subfamily) CHL1_001771 PF00004 ATPase family associated with various cellular activities (AAA) CHL1_001771 PF07724 AAA domain (Cdc48 subfamily) CHL1_001771 PF10431 C-terminal, D2-small domain, of ClpB protein CHL1_001772 PF00227 Proteasome subunit CHL1_001773 PF01751 Toprim domain CHL1_001773 PF01131 DNA topoisomerase CHL1_001773 PF01396 Topoisomerase DNA binding C4 zinc finger CHL1_001774 PF02481 DNA recombination-mediator protein A CHL1_001775 PF00497 Bacterial extracellular solute-binding proteins, family 3 CHL1_001781 PF00437 Type II/IV secretion system protein CHL1_001782 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CHL1_001793 PF00563 EAL domain CHL1_001793 PF00990 Diguanylate cyclase, GGDEF domain CHL1_001793 PF03707 Bacterial signalling protein N terminal repeat CHL1_001795 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CHL1_001796 PF11967 Recombination protein O N terminal CHL1_001796 PF02565 Recombination protein O C terminal CHL1_001797 PF01926 50S ribosome-binding GTPase CHL1_001797 PF07650 KH domain CHL1_001798 PF01219 Prokaryotic diacylglycerol kinase CHL1_001799 PF02130 Uncharacterized protein family UPF0054 CHL1_001801 PF03060 Nitronate monooxygenase CHL1_001803 PF02371 Transposase IS116/IS110/IS902 family CHL1_001803 PF01548 Transposase CHL1_001804 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CHL1_001804 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CHL1_001805 PF00550 Phosphopantetheine attachment site CHL1_001806 PF03060 Nitronate monooxygenase CHL1_001807 PF00698 Acyl transferase domain CHL1_001809 PF02801 Beta-ketoacyl synthase, C-terminal domain CHL1_001809 PF00109 Beta-ketoacyl synthase, N-terminal domain CHL1_001810 PF00364 Biotin-requiring enzyme CHL1_001811 PF07977 FabA-like domain CHL1_001812 PF00289 Biotin carboxylase, N-terminal domain CHL1_001812 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CHL1_001812 PF02785 Biotin carboxylase C-terminal domain CHL1_001813 PF01039 Carboxyl transferase domain CHL1_001813 PF17848 Acetyl-coA carboxylase zinc finger domain CHL1_001814 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CHL1_001816 PF00936 BMC domain CHL1_001818 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CHL1_001819 PF07992 Pyridine nucleotide-disulphide oxidoreductase CHL1_001819 PF18267 Rubredoxin NAD+ reductase C-terminal domain CHL1_001819 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CHL1_001819 PF04324 BFD-like [2Fe-2S] binding domain CHL1_001821 PF03063 Prismane/CO dehydrogenase family CHL1_001824 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CHL1_001824 PF07992 Pyridine nucleotide-disulphide oxidoreductase CHL1_001825 PF01022 Bacterial regulatory protein, arsR family CHL1_001826 PF01047 MarR family CHL1_001827 PF00255 Glutathione peroxidase CHL1_001829 PF08448 PAS fold CHL1_001829 PF00990 Diguanylate cyclase, GGDEF domain CHL1_001832 PF03705 CheR methyltransferase, all-alpha domain CHL1_001832 PF01739 CheR methyltransferase, SAM binding domain CHL1_001834 PF00486 Transcriptional regulatory protein, C terminal CHL1_001834 PF00072 Response regulator receiver domain CHL1_001835 PF01627 Hpt domain CHL1_001835 PF00512 His Kinase A (phospho-acceptor) domain CHL1_001835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHL1_001835 PF00672 HAMP domain CHL1_001835 PF00072 Response regulator receiver domain CHL1_001835 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CHL1_001838 PF01584 CheW-like domain CHL1_001839 PF07194 P2 response regulator binding domain CHL1_001839 PF01627 Hpt domain CHL1_001839 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHL1_001839 PF02895 Signal transducing histidine kinase, homodimeric domain CHL1_001839 PF01584 CheW-like domain CHL1_001840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CHL1_001840 PF00672 HAMP domain CHL1_001842 PF06445 GyrI-like small molecule binding domain CHL1_001842 PF12833 Helix-turn-helix domain CHL1_001846 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ CHL1_001851 PF00665 Integrase core domain CHL1_001855 PF02475 Met-10+ like-protein CHL1_001855 PF01938 TRAM domain CHL1_001855 PF05958 tRNA (Uracil-5-)-methyltransferase CHL1_001857 PF08497 Radical SAM N-terminal CHL1_001857 PF11842 Domain of unknown function (DUF3362) CHL1_001857 PF04055 Radical SAM superfamily CHL1_001858 PF02654 Cobalamin-5-phosphate synthase CHL1_001859 PF00381 PTS HPr component phosphorylation site CHL1_001861 PF02774 Semialdehyde dehydrogenase, dimerisation domain CHL1_001861 PF01118 Semialdehyde dehydrogenase, NAD binding domain CHL1_001862 PF00701 Dihydrodipicolinate synthetase family CHL1_001863 PF01113 Dihydrodipicolinate reductase, N-terminus CHL1_001863 PF05173 Dihydrodipicolinate reductase, C-terminus CHL1_001864 PF00696 Amino acid kinase family CHL1_001864 PF13840 ACT domain CHL1_001866 PF00072 Response regulator receiver domain CHL1_001867 PF00990 Diguanylate cyclase, GGDEF domain CHL1_001867 PF07694 5TMR of 5TMR-LYT CHL1_001868 PF00668 Condensation domain CHL1_001868 PF00550 Phosphopantetheine attachment site CHL1_001868 PF13193 AMP-binding enzyme C-terminal domain CHL1_001868 PF00501 AMP-binding enzyme CHL1_001869 PF00550 Phosphopantetheine attachment site CHL1_001869 PF13193 AMP-binding enzyme C-terminal domain CHL1_001869 PF00501 AMP-binding enzyme CHL1_001869 PF00668 Condensation domain CHL1_001872 PF00990 Diguanylate cyclase, GGDEF domain CHL1_001872 PF00072 Response regulator receiver domain CHL1_001873 PF02608 ABC transporter substrate-binding protein PnrA-like CHL1_001874 PF01966 HD domain CHL1_001874 PF00072 Response regulator receiver domain CHL1_001875 PF00990 Diguanylate cyclase, GGDEF domain CHL1_001875 PF08448 PAS fold CHL1_001885 PF00990 Diguanylate cyclase, GGDEF domain CHL1_001889 PF08463 EcoEI R protein C-terminal CHL1_001889 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) CHL1_001889 PF04851 Type III restriction enzyme, res subunit CHL1_001889 PF00271 Helicase conserved C-terminal domain CHL1_001890 PF00293 NUDIX domain CHL1_001894 PF00271 Helicase conserved C-terminal domain CHL1_001894 PF04851 Type III restriction enzyme, res subunit CHL1_001894 PF02151 UvrB/uvrC motif CHL1_001894 PF17757 UvrB interaction domain CHL1_001894 PF12344 Ultra-violet resistance protein B CHL1_001901 PF00072 Response regulator receiver domain CHL1_001903 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHL1_001903 PF00512 His Kinase A (phospho-acceptor) domain CHL1_001903 PF00072 Response regulator receiver domain CHL1_001903 PF01627 Hpt domain CHL1_001903 PF00989 PAS fold CHL1_001903 PF18415 Histidine kinase receptor ArcB trans-membrane domain CHL1_001904 PF04002 RadC-like JAB domain CHL1_001910 PF02368 Bacterial Ig-like domain (group 2) CHL1_001912 PF02535 ZIP Zinc transporter CHL1_001914 PF00391 PEP-utilising enzyme, mobile domain CHL1_001914 PF00381 PTS HPr component phosphorylation site CHL1_001914 PF03610 PTS system fructose IIA component CHL1_001914 PF05524 PEP-utilising enzyme, N-terminal CHL1_001915 PF02734 DAK2 domain CHL1_001916 PF02733 Dak1 domain CHL1_001917 PF00290 Tryptophan synthase alpha chain CHL1_001918 PF00291 Pyridoxal-phosphate dependent enzyme CHL1_001919 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CHL1_001920 PF00218 Indole-3-glycerol phosphate synthase CHL1_001921 PF00591 Glycosyl transferase family, a/b domain CHL1_001921 PF02885 Glycosyl transferase family, helical bundle domain CHL1_001922 PF00591 Glycosyl transferase family, a/b domain CHL1_001922 PF00117 Glutamine amidotransferase class-I CHL1_001922 PF02885 Glycosyl transferase family, helical bundle domain CHL1_001923 PF04715 Anthranilate synthase component I, N terminal region CHL1_001923 PF00425 chorismate binding enzyme CHL1_001926 PF03193 RsgA GTPase CHL1_001927 PF03551 Transcriptional regulator PadR-like family CHL1_001927 PF10400 Virulence activator alpha C-term CHL1_001930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CHL1_001930 PF02203 Tar ligand binding domain homologue CHL1_001930 PF00672 HAMP domain CHL1_001932 PF00072 Response regulator receiver domain CHL1_001933 PF00271 Helicase conserved C-terminal domain CHL1_001933 PF00270 DEAD/DEAH box helicase CHL1_001935 PF00313 'Cold-shock' DNA-binding domain CHL1_001938 PF00294 pfkB family carbohydrate kinase CHL1_001939 PF00797 N-acetyltransferase CHL1_001941 PF00270 DEAD/DEAH box helicase CHL1_001941 PF09382 RQC domain CHL1_001941 PF16124 RecQ zinc-binding CHL1_001941 PF00271 Helicase conserved C-terminal domain CHL1_001941 PF00570 HRDC domain CHL1_001944 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CHL1_001945 PF02545 Maf-like protein CHL1_001946 PF11954 Domain of unknown function (DUF3471) CHL1_001946 PF00144 Beta-lactamase CHL1_001948 PF00999 Sodium/hydrogen exchanger family CHL1_001949 PF00474 Sodium:solute symporter family CHL1_001951 PF00990 Diguanylate cyclase, GGDEF domain CHL1_001951 PF03707 Bacterial signalling protein N terminal repeat CHL1_001951 PF00563 EAL domain CHL1_001959 PF00563 EAL domain CHL1_001959 PF00990 Diguanylate cyclase, GGDEF domain CHL1_001959 PF03707 Bacterial signalling protein N terminal repeat CHL1_001962 PF02666 Phosphatidylserine decarboxylase CHL1_001964 PF00990 Diguanylate cyclase, GGDEF domain CHL1_001965 PF00990 Diguanylate cyclase, GGDEF domain CHL1_001965 PF08448 PAS fold CHL1_001967 PF12833 Helix-turn-helix domain CHL1_001968 PF01243 Pyridoxamine 5'-phosphate oxidase CHL1_001968 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CHL1_001969 PF00291 Pyridoxal-phosphate dependent enzyme CHL1_001971 PF01323 DSBA-like thioredoxin domain CHL1_001973 PF00392 Bacterial regulatory proteins, gntR family CHL1_001973 PF07702 UTRA domain CHL1_001974 PF00005 ABC transporter CHL1_001976 PF11849 Domain of unknown function (DUF3369) CHL1_001980 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CHL1_001980 PF14579 Helix-hairpin-helix motif CHL1_001980 PF02811 PHP domain CHL1_001980 PF11490 DNA polymerase III polC-type N-terminus II CHL1_001980 PF00929 Exonuclease CHL1_001980 PF07733 Bacterial DNA polymerase III alpha NTPase domain CHL1_001981 PF00990 Diguanylate cyclase, GGDEF domain CHL1_001981 PF17151 Periplasmic sensor domain CHL1_001983 PF01116 Fructose-bisphosphate aldolase class-II CHL1_001985 PF04324 BFD-like [2Fe-2S] binding domain CHL1_001985 PF07992 Pyridine nucleotide-disulphide oxidoreductase CHL1_001986 PF01266 FAD dependent oxidoreductase CHL1_001986 PF04324 BFD-like [2Fe-2S] binding domain CHL1_001988 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CHL1_001988 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CHL1_001990 PF00561 alpha/beta hydrolase fold CHL1_001995 PF03063 Prismane/CO dehydrogenase family CHL1_001996 PF17179 4Fe-4S dicluster domain CHL1_001997 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CHL1_001997 PF00175 Oxidoreductase NAD-binding domain CHL1_001998 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CHL1_001998 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CHL1_001998 PF13187 4Fe-4S dicluster domain CHL1_001999 PF00258 Flavodoxin CHL1_001999 PF00753 Metallo-beta-lactamase superfamily CHL1_001999 PF00301 Rubredoxin CHL1_002000 PF00196 Bacterial regulatory proteins, luxR family CHL1_002000 PF17874 MalT-like TPR region CHL1_002001 PF12848 ABC transporter CHL1_002001 PF00005 ABC transporter CHL1_002002 PF00183 Hsp90 protein CHL1_002003 PF00155 Aminotransferase class I and II CHL1_002004 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CHL1_002004 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CHL1_002008 PF03591 AzlC protein CHL1_002009 PF00155 Aminotransferase class I and II CHL1_002009 PF00392 Bacterial regulatory proteins, gntR family CHL1_002010 PF10996 Beta-Casp domain CHL1_002010 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CHL1_002010 PF00753 Metallo-beta-lactamase superfamily CHL1_002011 PF05362 Lon protease (S16) C-terminal proteolytic domain CHL1_002011 PF13654 AAA domain CHL1_002015 PF02229 Transcriptional Coactivator p15 (PC4) CHL1_002016 PF02195 ParB-like nuclease domain CHL1_002016 PF17762 HTH domain found in ParB protein CHL1_002017 PF01076 Plasmid recombination enzyme CHL1_002023 PF00679 Elongation factor G C-terminus CHL1_002023 PF14492 Elongation Factor G, domain II CHL1_002023 PF03764 Elongation factor G, domain IV CHL1_002023 PF00009 Elongation factor Tu GTP binding domain CHL1_002025 PF12729 Four helix bundle sensory module for signal transduction CHL1_002025 PF00672 HAMP domain CHL1_002025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CHL1_002026 PF02203 Tar ligand binding domain homologue CHL1_002026 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CHL1_002026 PF00672 HAMP domain CHL1_002027 PF12729 Four helix bundle sensory module for signal transduction CHL1_002027 PF00672 HAMP domain CHL1_002027 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CHL1_002031 PF03358 NADPH-dependent FMN reductase CHL1_002033 PF00563 EAL domain CHL1_002033 PF13426 PAS domain CHL1_002033 PF00990 Diguanylate cyclase, GGDEF domain CHL1_002033 PF05231 MASE1 CHL1_002033 PF08447 PAS fold CHL1_002033 PF08448 PAS fold CHL1_002036 PF12848 ABC transporter CHL1_002036 PF00005 ABC transporter CHL1_002037 PF00884 Sulfatase CHL1_002037 PF12411 Choline sulfatase enzyme C terminal CHL1_002038 PF13186 Iron-sulfur cluster-binding domain CHL1_002038 PF04055 Radical SAM superfamily CHL1_002039 PF13614 AAA domain CHL1_002040 PF13807 G-rich domain on putative tyrosine kinase CHL1_002040 PF02706 Chain length determinant protein CHL1_002041 PF03816 Cell envelope-related transcriptional attenuator domain CHL1_002042 PF02719 Polysaccharide biosynthesis protein CHL1_002044 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CHL1_002044 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CHL1_002044 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CHL1_002045 PF01370 NAD dependent epimerase/dehydratase family CHL1_002046 PF13229 Right handed beta helix region CHL1_002046 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) CHL1_002046 PF12708 Pectate lyase superfamily protein CHL1_002047 PF12708 Pectate lyase superfamily protein CHL1_002047 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) CHL1_002047 PF13229 Right handed beta helix region CHL1_002048 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CHL1_002054 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CHL1_002055 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CHL1_002056 PF00535 Glycosyl transferase family 2 CHL1_002060 PF00534 Glycosyl transferases group 1 CHL1_002060 PF13439 Glycosyltransferase Family 4 CHL1_002061 PF13439 Glycosyltransferase Family 4 CHL1_002061 PF00534 Glycosyl transferases group 1 CHL1_002062 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CHL1_002063 PF00132 Bacterial transferase hexapeptide (six repeats) CHL1_002064 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CHL1_002064 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CHL1_002065 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CHL1_002065 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CHL1_002065 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CHL1_002068 PF00132 Bacterial transferase hexapeptide (six repeats) CHL1_002069 PF02397 Bacterial sugar transferase CHL1_002070 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CHL1_002071 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) CHL1_002071 PF12708 Pectate lyase superfamily protein CHL1_002071 PF08548 Peptidase M10 serralysin C terminal CHL1_002073 PF02021 Uncharacterised protein family UPF0102 CHL1_002074 PF01351 Ribonuclease HII CHL1_002075 PF01926 50S ribosome-binding GTPase CHL1_002076 PF10502 Signal peptidase, peptidase S26 CHL1_002077 PF01245 Ribosomal protein L19 CHL1_002078 PF01746 tRNA (Guanine-1)-methyltransferase CHL1_002079 PF01782 RimM N-terminal domain CHL1_002081 PF00886 Ribosomal protein S16 CHL1_002082 PF00448 SRP54-type protein, GTPase domain CHL1_002082 PF02881 SRP54-type protein, helical bundle domain CHL1_002082 PF02978 Signal peptide binding domain CHL1_002083 PF04297 Putative helix-turn-helix protein, YlxM / p13 like CHL1_002084 PF02881 SRP54-type protein, helical bundle domain CHL1_002084 PF00448 SRP54-type protein, GTPase domain CHL1_002085 PF06470 SMC proteins Flexible Hinge Domain CHL1_002085 PF02463 RecF/RecN/SMC N terminal domain CHL1_002086 PF06470 SMC proteins Flexible Hinge Domain CHL1_002086 PF02463 RecF/RecN/SMC N terminal domain CHL1_002087 PF00035 Double-stranded RNA binding motif CHL1_002087 PF14622 Ribonuclease-III-like CHL1_002088 PF00550 Phosphopantetheine attachment site CHL1_002089 PF02504 Fatty acid synthesis protein CHL1_002090 PF01783 Ribosomal L32p protein family CHL1_002092 PF00871 Acetokinase family CHL1_002093 PF05636 HIGH Nucleotidyl Transferase CHL1_002094 PF00135 Carboxylesterase family CHL1_002098 PF05191 Adenylate kinase, active site lid CHL1_002099 PF11871 Domain of unknown function (DUF3391) CHL1_002099 PF01966 HD domain CHL1_002100 PF06207 Protein of unknown function (DUF1002) CHL1_002102 PF01121 Dephospho-CoA kinase CHL1_002103 PF00476 DNA polymerase family A CHL1_002103 PF01367 5'-3' exonuclease, C-terminal SAM fold CHL1_002103 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CHL1_002104 PF00476 DNA polymerase family A CHL1_002104 PF01367 5'-3' exonuclease, C-terminal SAM fold CHL1_002104 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CHL1_002105 PF01381 Helix-turn-helix CHL1_002108 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CHL1_002108 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CHL1_002108 PF07992 Pyridine nucleotide-disulphide oxidoreductase CHL1_002110 PF10369 Small subunit of acetolactate synthase CHL1_002111 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CHL1_002111 PF00205 Thiamine pyrophosphate enzyme, central domain CHL1_002111 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CHL1_002112 PF00205 Thiamine pyrophosphate enzyme, central domain CHL1_002112 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CHL1_002112 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CHL1_002114 PF17783 CvfB-like winged helix domain CHL1_002114 PF13509 S1 domain CHL1_002116 PF01467 Cytidylyltransferase-like CHL1_002118 PF00271 Helicase conserved C-terminal domain CHL1_002118 PF17191 RecG wedge domain CHL1_002118 PF00270 DEAD/DEAH box helicase CHL1_002119 PF13684 Dihydroxyacetone kinase family CHL1_002119 PF02734 DAK2 domain CHL1_002120 PF03780 Asp23 family, cell envelope-related function CHL1_002121 PF00830 Ribosomal L28 family CHL1_002123 PF03193 RsgA GTPase CHL1_002123 PF16745 RsgA N-terminal domain CHL1_002124 PF00069 Protein kinase domain CHL1_002124 PF03793 PASTA domain CHL1_002126 PF04055 Radical SAM superfamily CHL1_002127 PF01189 16S rRNA methyltransferase RsmB/F CHL1_002127 PF01029 NusB family CHL1_002128 PF01189 16S rRNA methyltransferase RsmB/F CHL1_002128 PF01029 NusB family CHL1_002129 PF04298 Putative neutral zinc metallopeptidase CHL1_002130 PF02911 Formyl transferase, C-terminal domain CHL1_002130 PF00551 Formyl transferase CHL1_002131 PF01327 Polypeptide deformylase CHL1_002132 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CHL1_002132 PF00271 Helicase conserved C-terminal domain CHL1_002132 PF17764 3′ DNA-binding domain (3′BD) CHL1_002132 PF18074 Primosomal protein N C-terminal domain CHL1_002132 PF04851 Type III restriction enzyme, res subunit CHL1_002133 PF01192 RNA polymerase Rpb6 CHL1_002134 PF00625 Guanylate kinase CHL1_002135 PF03755 YicC-like family, N-terminal region CHL1_002135 PF08340 Domain of unknown function (DUF1732) CHL1_002136 PF05670 NFACT protein RNA binding domain CHL1_002137 PF00849 RNA pseudouridylate synthase CHL1_002137 PF01479 S4 domain CHL1_002139 PF04472 Cell division protein SepF CHL1_002141 PF01168 Alanine racemase, N-terminal domain CHL1_002145 PF02938 GAD domain CHL1_002145 PF01336 OB-fold nucleic acid binding domain CHL1_002145 PF00152 tRNA synthetases class II (D, K and N) CHL1_002146 PF02938 GAD domain CHL1_002146 PF00152 tRNA synthetases class II (D, K and N) CHL1_002146 PF01336 OB-fold nucleic acid binding domain CHL1_002149 PF00535 Glycosyl transferase family 2 CHL1_002151 PF00457 Glycosyl hydrolases family 11 CHL1_002151 PF03422 Carbohydrate binding module (family 6) CHL1_002151 PF01522 Polysaccharide deacetylase CHL1_002152 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CHL1_002152 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CHL1_002152 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CHL1_002153 PF04055 Radical SAM superfamily CHL1_002154 PF00753 Metallo-beta-lactamase superfamily CHL1_002155 PF02580 D-Tyr-tRNA(Tyr) deacylase CHL1_002156 PF04607 Region found in RelA / SpoT proteins CHL1_002156 PF02824 TGS domain CHL1_002156 PF13291 ACT domain CHL1_002157 PF00156 Phosphoribosyl transferase domain CHL1_002158 PF01368 DHH family CHL1_002158 PF02272 DHHA1 domain CHL1_002158 PF17768 RecJ OB domain CHL1_002158 PF10141 Single-strand DNA-specific exonuclease, C terminal domain CHL1_002159 PF02355 Protein export membrane protein CHL1_002159 PF07549 SecD/SecF GG Motif CHL1_002160 PF02355 Protein export membrane protein CHL1_002160 PF07549 SecD/SecF GG Motif CHL1_002161 PF00749 tRNA synthetases class I (E and Q), catalytic domain CHL1_002162 PF08331 Domain of unknown function (DUF1730) CHL1_002163 PF01926 50S ribosome-binding GTPase CHL1_002164 PF02190 ATP-dependent protease La (LON) substrate-binding domain CHL1_002164 PF00004 ATPase family associated with various cellular activities (AAA) CHL1_002164 PF05362 Lon protease (S16) C-terminal proteolytic domain CHL1_002165 PF10431 C-terminal, D2-small domain, of ClpB protein CHL1_002165 PF07724 AAA domain (Cdc48 subfamily) CHL1_002165 PF06689 ClpX C4-type zinc finger CHL1_002166 PF00574 Clp protease CHL1_002167 PF05698 Bacterial trigger factor protein (TF) C-terminus CHL1_002167 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CHL1_002167 PF05697 Bacterial trigger factor protein (TF) CHL1_002168 PF00005 ABC transporter CHL1_002169 PF00005 ABC transporter CHL1_002169 PF12399 Branched-chain amino acid ATP-binding cassette transporter CHL1_002170 PF02653 Branched-chain amino acid transport system / permease component CHL1_002170 PF11862 Domain of unknown function (DUF3382) CHL1_002171 PF02653 Branched-chain amino acid transport system / permease component CHL1_002172 PF13458 Periplasmic binding protein CHL1_002173 PF00633 Helix-hairpin-helix motif CHL1_002173 PF00730 HhH-GPD superfamily base excision DNA repair protein CHL1_002174 PF07883 Cupin domain CHL1_002175 PF00912 Transglycosylase CHL1_002175 PF00905 Penicillin binding protein transpeptidase domain CHL1_002176 PF00849 RNA pseudouridylate synthase CHL1_002177 PF04060 Putative Fe-S cluster CHL1_002177 PF00037 4Fe-4S binding domain CHL1_002177 PF13187 4Fe-4S dicluster domain CHL1_002178 PF02508 Rnf-Nqr subunit, membrane protein CHL1_002179 PF02508 Rnf-Nqr subunit, membrane protein CHL1_002180 PF04205 FMN-binding domain CHL1_002181 PF03116 NQR2, RnfD, RnfE family CHL1_002182 PF10531 SLBB domain CHL1_002182 PF13375 RnfC Barrel sandwich hybrid domain CHL1_002182 PF13237 4Fe-4S dicluster domain CHL1_002182 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CHL1_002183 PF02127 Aminopeptidase I zinc metalloprotease (M18) CHL1_002184 PF05979 Bacterial protein of unknown function (DUF896) CHL1_002185 PF06838 Methionine gamma-lyase CHL1_002187 PF01119 DNA mismatch repair protein, C-terminal domain CHL1_002187 PF08676 MutL C terminal dimerisation domain CHL1_002188 PF01119 DNA mismatch repair protein, C-terminal domain CHL1_002188 PF08676 MutL C terminal dimerisation domain CHL1_002189 PF05362 Lon protease (S16) C-terminal proteolytic domain CHL1_002189 PF02190 ATP-dependent protease La (LON) substrate-binding domain CHL1_002189 PF00004 ATPase family associated with various cellular activities (AAA) CHL1_002190 PF01047 MarR family CHL1_002190 PF00583 Acetyltransferase (GNAT) family CHL1_002194 PF02447 GntP family permease CHL1_002196 PF13419 Haloacid dehalogenase-like hydrolase CHL1_002200 PF13393 Histidyl-tRNA synthetase CHL1_002201 PF01634 ATP phosphoribosyltransferase CHL1_002202 PF00815 Histidinol dehydrogenase CHL1_002203 PF00155 Aminotransferase class I and II CHL1_002204 PF00475 Imidazoleglycerol-phosphate dehydratase CHL1_002205 PF00117 Glutamine amidotransferase class-I CHL1_002206 PF00977 Histidine biosynthesis protein CHL1_002207 PF00977 Histidine biosynthesis protein CHL1_002208 PF01502 Phosphoribosyl-AMP cyclohydrolase CHL1_002208 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CHL1_002212 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain CHL1_002212 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 CHL1_002213 PF18419 ATP-grasp-like domain CHL1_002213 PF04262 Glutamate-cysteine ligase CHL1_002213 PF02655 ATP-grasp domain CHL1_002214 PF04262 Glutamate-cysteine ligase CHL1_002214 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CHL1_002214 PF18419 ATP-grasp-like domain CHL1_002215 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CHL1_002215 PF18419 ATP-grasp-like domain CHL1_002215 PF04262 Glutamate-cysteine ligase CHL1_002218 PF02421 Ferrous iron transport protein B CHL1_002218 PF07670 Nucleoside recognition CHL1_002218 PF17910 FeoB cytosolic helical domain CHL1_002218 PF07664 Ferrous iron transport protein B C terminus CHL1_002219 PF04012 PspA/IM30 family CHL1_002222 PF04073 Aminoacyl-tRNA editing domain CHL1_002229 PF05190 MutS family domain IV CHL1_002229 PF00488 MutS domain V CHL1_002229 PF01624 MutS domain I CHL1_002229 PF05188 MutS domain II CHL1_002229 PF05192 MutS domain III CHL1_002230 PF00106 short chain dehydrogenase CHL1_002234 PF08000 Bacterial PH domain CHL1_002239 PF00990 Diguanylate cyclase, GGDEF domain CHL1_002239 PF03707 Bacterial signalling protein N terminal repeat CHL1_002239 PF00563 EAL domain CHL1_002241 PF02590 Predicted SPOUT methyltransferase CHL1_002242 PF01430 Hsp33 protein CHL1_002243 PF02446 4-alpha-glucanotransferase CHL1_002245 PF02653 Branched-chain amino acid transport system / permease component CHL1_002246 PF02653 Branched-chain amino acid transport system / permease component CHL1_002246 PF11862 Domain of unknown function (DUF3382) CHL1_002247 PF00005 ABC transporter CHL1_002247 PF12399 Branched-chain amino acid ATP-binding cassette transporter CHL1_002248 PF00005 ABC transporter CHL1_002249 PF02541 Ppx/GppA phosphatase family CHL1_002250 PF02503 Polyphosphate kinase middle domain CHL1_002250 PF13090 Polyphosphate kinase C-terminal domain 2 CHL1_002250 PF17941 Polyphosphate kinase C-terminal domain 1 CHL1_002250 PF13089 Polyphosphate kinase N-terminal domain CHL1_002252 PF04474 Protein of unknown function (DUF554) CHL1_002253 PF00301 Rubredoxin CHL1_002254 PF00480 ROK family CHL1_002256 PF12704 MacB-like periplasmic core domain CHL1_002256 PF02687 FtsX-like permease family CHL1_002258 PF00005 ABC transporter CHL1_002260 PF00005 ABC transporter CHL1_002261 PF00392 Bacterial regulatory proteins, gntR family CHL1_002262 PF02203 Tar ligand binding domain homologue CHL1_002262 PF00672 HAMP domain CHL1_002262 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CHL1_002264 PF00348 Polyprenyl synthetase CHL1_002265 PF07992 Pyridine nucleotide-disulphide oxidoreductase CHL1_002267 PF03109 ABC1 family CHL1_002269 PF13291 ACT domain CHL1_002269 PF00291 Pyridoxal-phosphate dependent enzyme CHL1_002270 PF02525 Flavodoxin-like fold CHL1_002271 PF04015 Domain of unknown function (DUF362) CHL1_002272 PF00158 Sigma-54 interaction domain CHL1_002272 PF02954 Bacterial regulatory protein, Fis family CHL1_002272 PF13426 PAS domain CHL1_002273 PF03099 Biotin/lipoate A/B protein ligase family CHL1_002274 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CHL1_002274 PF00364 Biotin-requiring enzyme CHL1_002274 PF02817 e3 binding domain CHL1_002276 PF00109 Beta-ketoacyl synthase, N-terminal domain CHL1_002276 PF16197 Ketoacyl-synthetase C-terminal extension CHL1_002276 PF00550 Phosphopantetheine attachment site CHL1_002276 PF00501 AMP-binding enzyme CHL1_002276 PF02801 Beta-ketoacyl synthase, C-terminal domain CHL1_002276 PF00668 Condensation domain CHL1_002276 PF00202 Aminotransferase class-III CHL1_002276 PF13193 AMP-binding enzyme C-terminal domain CHL1_002277 PF00731 AIR carboxylase CHL1_002278 PF01969 Protein of unknown function DUF111 CHL1_002279 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CHL1_002279 PF17202 Single cache domain 3 CHL1_002279 PF00672 HAMP domain CHL1_002283 PF02540 NAD synthase CHL1_002284 PF00958 GMP synthase C terminal domain CHL1_002284 PF00117 Glutamine amidotransferase class-I CHL1_002285 PF03180 NLPA lipoprotein CHL1_002286 PF09383 NIL domain CHL1_002286 PF00005 ABC transporter CHL1_002287 PF00528 Binding-protein-dependent transport system inner membrane component CHL1_002288 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CHL1_002290 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CHL1_002290 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CHL1_002291 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CHL1_002292 PF00501 AMP-binding enzyme CHL1_002292 PF14535 AMP-binding enzyme C-terminal domain CHL1_002293 PF00155 Aminotransferase class I and II CHL1_002294 PF00155 Aminotransferase class I and II CHL1_002295 PF01053 Cys/Met metabolism PLP-dependent enzyme CHL1_002297 PF00899 ThiF family CHL1_002299 PF00291 Pyridoxal-phosphate dependent enzyme CHL1_002300 PF01053 Cys/Met metabolism PLP-dependent enzyme CHL1_002301 PF01208 Uroporphyrinogen decarboxylase (URO-D) CHL1_002302 PF04204 Homoserine O-succinyltransferase CHL1_002303 PF01053 Cys/Met metabolism PLP-dependent enzyme CHL1_002304 PF00111 2Fe-2S iron-sulfur cluster binding domain CHL1_002304 PF00175 Oxidoreductase NAD-binding domain CHL1_002305 PF01208 Uroporphyrinogen decarboxylase (URO-D) CHL1_002308 PF07683 Cobalamin synthesis protein cobW C-terminal domain CHL1_002308 PF02492 CobW/HypB/UreG, nucleotide-binding domain CHL1_002309 PF01208 Uroporphyrinogen decarboxylase (URO-D) CHL1_002310 PF02607 B12 binding domain CHL1_002310 PF02310 B12 binding domain CHL1_002311 PF02082 Transcriptional regulator CHL1_002312 PF00291 Pyridoxal-phosphate dependent enzyme CHL1_002313 PF00266 Aminotransferase class-V CHL1_002315 PF00899 ThiF family CHL1_002316 PF00072 Response regulator receiver domain CHL1_002316 PF00486 Transcriptional regulatory protein, C terminal CHL1_002318 PF00672 HAMP domain CHL1_002318 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHL1_002318 PF00512 His Kinase A (phospho-acceptor) domain CHL1_002319 PF00403 Heavy-metal-associated domain CHL1_002322 PF00403 Heavy-metal-associated domain CHL1_002325 PF02625 XdhC and CoxI family CHL1_002325 PF13478 XdhC Rossmann domain CHL1_002326 PF02954 Bacterial regulatory protein, Fis family CHL1_002326 PF13426 PAS domain CHL1_002326 PF00158 Sigma-54 interaction domain CHL1_002328 PF00132 Bacterial transferase hexapeptide (six repeats) CHL1_002328 PF00483 Nucleotidyl transferase CHL1_002329 PF02625 XdhC and CoxI family CHL1_002329 PF13478 XdhC Rossmann domain CHL1_002330 PF14535 AMP-binding enzyme C-terminal domain CHL1_002330 PF00501 AMP-binding enzyme CHL1_002331 PF06463 Molybdenum Cofactor Synthesis C CHL1_002331 PF04055 Radical SAM superfamily CHL1_002333 PF01209 ubiE/COQ5 methyltransferase family CHL1_002335 PF01593 Flavin containing amine oxidoreductase CHL1_002337 PF00111 2Fe-2S iron-sulfur cluster binding domain CHL1_002337 PF01799 [2Fe-2S] binding domain CHL1_002337 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CHL1_002337 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CHL1_002339 PF14262 Carbohydrate-binding domain-containing protein Cthe_2159 CHL1_002348 PF13426 PAS domain CHL1_002348 PF08448 PAS fold CHL1_002348 PF00990 Diguanylate cyclase, GGDEF domain CHL1_002348 PF00563 EAL domain CHL1_002348 PF08447 PAS fold CHL1_002348 PF05231 MASE1 CHL1_002350 PF11871 Domain of unknown function (DUF3391) CHL1_002350 PF01966 HD domain CHL1_002351 PF00072 Response regulator receiver domain CHL1_002351 PF00486 Transcriptional regulatory protein, C terminal CHL1_002352 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHL1_002352 PF00512 His Kinase A (phospho-acceptor) domain CHL1_002352 PF09308 LuxQ, periplasmic CHL1_002352 PF00072 Response regulator receiver domain CHL1_002353 PF03975 CheD chemotactic sensory transduction CHL1_002354 PF00072 Response regulator receiver domain CHL1_002354 PF01339 CheB methylesterase CHL1_002355 PF00672 HAMP domain CHL1_002355 PF02203 Tar ligand binding domain homologue CHL1_002355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CHL1_002356 PF01584 CheW-like domain CHL1_002357 PF02895 Signal transducing histidine kinase, homodimeric domain CHL1_002357 PF01584 CheW-like domain CHL1_002357 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHL1_002357 PF07194 P2 response regulator binding domain CHL1_002357 PF01627 Hpt domain CHL1_002358 PF00440 Bacterial regulatory proteins, tetR family CHL1_002363 PF01268 Formate--tetrahydrofolate ligase CHL1_002366 PF02310 B12 binding domain CHL1_002366 PF02607 B12 binding domain CHL1_002369 PF13307 Helicase C-terminal domain CHL1_002369 PF06733 DEAD_2 CHL1_002372 PF11799 impB/mucB/samB family C-terminal domain CHL1_002372 PF00817 impB/mucB/samB family CHL1_002375 PF01869 BadF/BadG/BcrA/BcrD ATPase family CHL1_002376 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component CHL1_002383 PF01966 HD domain CHL1_002383 PF00072 Response regulator receiver domain CHL1_002392 PF01032 FecCD transport family CHL1_002393 PF00005 ABC transporter CHL1_002395 PF07722 Peptidase C26 CHL1_002397 PF00293 NUDIX domain CHL1_002398 PF01880 Desulfoferrodoxin CHL1_002399 PF01183 Glycosyl hydrolases family 25 CHL1_002400 PF02540 NAD synthase CHL1_002401 PF00664 ABC transporter transmembrane region CHL1_002401 PF00005 ABC transporter CHL1_002402 PF01145 SPFH domain / Band 7 family CHL1_002404 PF01964 Radical SAM ThiC family CHL1_002405 PF01964 Radical SAM ThiC family CHL1_002406 PF02277 Phosphoribosyltransferase CHL1_002407 PF05175 Methyltransferase small domain CHL1_002409 PF02310 B12 binding domain CHL1_002409 PF04055 Radical SAM superfamily CHL1_002410 PF00571 CBS domain CHL1_002410 PF03471 Transporter associated domain CHL1_002410 PF01595 Cyclin M transmembrane N-terminal domain CHL1_002411 PF05651 Putative sugar diacid recognition CHL1_002411 PF17853 GGDEF-like domain CHL1_002411 PF13556 PucR C-terminal helix-turn-helix domain CHL1_002412 PF02595 Glycerate kinase family CHL1_002413 PF00561 alpha/beta hydrolase fold CHL1_002414 PF05816 Toxic anion resistance protein (TelA) CHL1_002416 PF00005 ABC transporter CHL1_002418 PF01891 Cobalt uptake substrate-specific transmembrane region CHL1_002418 PF13190 PDGLE domain CHL1_002419 PF07943 Penicillin-binding protein 5, C-terminal domain CHL1_002419 PF00768 D-alanyl-D-alanine carboxypeptidase CHL1_002420 PF08367 Peptidase M16C associated CHL1_002420 PF00675 Insulinase (Peptidase family M16) CHL1_002420 PF05193 Peptidase M16 inactive domain CHL1_002421 PF16193 AAA C-terminal domain CHL1_002421 PF12002 MgsA AAA+ ATPase C terminal CHL1_002421 PF05496 Holliday junction DNA helicase RuvB P-loop domain CHL1_002426 PF06961 Protein of unknown function (DUF1294) CHL1_002427 PF00392 Bacterial regulatory proteins, gntR family CHL1_002429 PF02607 B12 binding domain CHL1_002429 PF02310 B12 binding domain CHL1_002432 PF02028 BCCT, betaine/carnitine/choline family transporter CHL1_002434 PF02310 B12 binding domain CHL1_002434 PF02607 B12 binding domain CHL1_002437 PF00464 Serine hydroxymethyltransferase CHL1_002440 PF01967 MoaC family CHL1_002441 PF06463 Molybdenum Cofactor Synthesis C CHL1_002441 PF04055 Radical SAM superfamily CHL1_002442 PF12728 Helix-turn-helix domain CHL1_002442 PF12727 PBP superfamily domain CHL1_002443 PF00994 Probable molybdopterin binding domain CHL1_002443 PF03454 MoeA C-terminal region (domain IV) CHL1_002443 PF03453 MoeA N-terminal region (domain I and II) CHL1_002444 PF00899 ThiF family CHL1_002445 PF00994 Probable molybdopterin binding domain CHL1_002447 PF00462 Glutaredoxin CHL1_002449 PF13520 Amino acid permease CHL1_002454 PF12849 PBP superfamily domain CHL1_002455 PF00528 Binding-protein-dependent transport system inner membrane component CHL1_002456 PF00005 ABC transporter CHL1_002457 PF01966 HD domain CHL1_002457 PF11871 Domain of unknown function (DUF3391) CHL1_002458 PF00005 ABC transporter CHL1_002458 PF08402 TOBE domain CHL1_002459 PF00528 Binding-protein-dependent transport system inner membrane component CHL1_002460 PF00528 Binding-protein-dependent transport system inner membrane component CHL1_002461 PF13416 Bacterial extracellular solute-binding protein CHL1_002462 PF00999 Sodium/hydrogen exchanger family CHL1_002467 PF00990 Diguanylate cyclase, GGDEF domain CHL1_002467 PF03707 Bacterial signalling protein N terminal repeat CHL1_002467 PF00563 EAL domain CHL1_002468 PF00596 Class II Aldolase and Adducin N-terminal domain CHL1_002469 PF02203 Tar ligand binding domain homologue CHL1_002469 PF00672 HAMP domain CHL1_002469 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CHL1_002470 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CHL1_002470 PF00205 Thiamine pyrophosphate enzyme, central domain CHL1_002470 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CHL1_002471 PF00920 Dehydratase family CHL1_002472 PF00180 Isocitrate/isopropylmalate dehydrogenase CHL1_002473 PF00682 HMGL-like CHL1_002473 PF08502 LeuA allosteric (dimerisation) domain CHL1_002474 PF00682 HMGL-like CHL1_002474 PF08502 LeuA allosteric (dimerisation) domain CHL1_002475 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CHL1_002475 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CHL1_002477 PF14437 MafB19-like deaminase CHL1_002478 PF00149 Calcineurin-like phosphoesterase CHL1_002478 PF02872 5'-nucleotidase, C-terminal domain CHL1_002479 PF12822 ECF transporter, substrate-specific component CHL1_002480 PF04127 DNA / pantothenate metabolism flavoprotein CHL1_002480 PF02441 Flavoprotein CHL1_002484 PF02350 UDP-N-acetylglucosamine 2-epimerase CHL1_002490 PF01458 Uncharacterized protein family (UPF0051) CHL1_002491 PF00005 ABC transporter CHL1_002492 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CHL1_002492 PF07992 Pyridine nucleotide-disulphide oxidoreductase CHL1_002493 PF17773 UPF0176 acylphosphatase like domain CHL1_002493 PF00581 Rhodanese-like domain CHL1_002493 PF12368 Rhodanase C-terminal CHL1_002494 PF16363 GDP-mannose 4,6 dehydratase CHL1_002495 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CHL1_002495 PF00391 PEP-utilising enzyme, mobile domain CHL1_002495 PF02896 PEP-utilising enzyme, TIM barrel domain CHL1_002496 PF03618 Kinase/pyrophosphorylase CHL1_002497 PF00571 CBS domain CHL1_002497 PF08279 HTH domain CHL1_002498 PF10531 SLBB domain CHL1_002500 PF00005 ABC transporter CHL1_002501 PF00528 Binding-protein-dependent transport system inner membrane component CHL1_002502 PF00497 Bacterial extracellular solute-binding proteins, family 3 CHL1_002504 PF03099 Biotin/lipoate A/B protein ligase family CHL1_002504 PF10437 Bacterial lipoate protein ligase C-terminus CHL1_002505 PF00356 Bacterial regulatory proteins, lacI family CHL1_002508 PF05681 Fumarate hydratase (Fumerase) CHL1_002510 PF00588 SpoU rRNA Methylase family CHL1_002511 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHL1_002511 PF00512 His Kinase A (phospho-acceptor) domain CHL1_002512 PF00486 Transcriptional regulatory protein, C terminal CHL1_002512 PF00072 Response regulator receiver domain CHL1_002513 PF00072 Response regulator receiver domain CHL1_002513 PF00486 Transcriptional regulatory protein, C terminal CHL1_002514 PF00512 His Kinase A (phospho-acceptor) domain CHL1_002514 PF18719 ArlS sensor domain CHL1_002514 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHL1_002515 PF00202 Aminotransferase class-III CHL1_002516 PF00202 Aminotransferase class-III CHL1_002517 PF00696 Amino acid kinase family CHL1_002518 PF01960 ArgJ family CHL1_002519 PF01118 Semialdehyde dehydrogenase, NAD binding domain CHL1_002519 PF02774 Semialdehyde dehydrogenase, dimerisation domain CHL1_002520 PF00764 Arginosuccinate synthase CHL1_002521 PF14698 Argininosuccinate lyase C-terminal CHL1_002521 PF00206 Lyase CHL1_002526 PF13335 Magnesium chelatase, subunit ChlI C-terminal CHL1_002526 PF01078 Magnesium chelatase, subunit ChlI CHL1_002527 PF01790 Prolipoprotein diacylglyceryl transferase CHL1_002528 PF06130 Phosphate propanoyltransferase CHL1_002529 PF02463 RecF/RecN/SMC N terminal domain CHL1_002530 PF02463 RecF/RecN/SMC N terminal domain CHL1_002531 PF01316 Arginine repressor, DNA binding domain CHL1_002531 PF02863 Arginine repressor, C-terminal domain CHL1_002532 PF01513 ATP-NAD kinase CHL1_002533 PF01728 FtsJ-like methyltransferase CHL1_002533 PF01479 S4 domain CHL1_002534 PF00348 Polyprenyl synthetase CHL1_002535 PF02609 Exonuclease VII small subunit CHL1_002536 PF13742 OB-fold nucleic acid binding domain CHL1_002536 PF02601 Exonuclease VII, large subunit CHL1_002537 PF00814 Glycoprotease family CHL1_002538 PF01029 NusB family CHL1_002541 PF01132 Elongation factor P (EF-P) OB domain CHL1_002541 PF08207 Elongation factor P (EF-P) KOW-like domain CHL1_002541 PF09285 Elongation factor P, C-terminal CHL1_002542 PF17827 PrmC N-terminal domain CHL1_002542 PF05175 Methyltransferase small domain CHL1_002543 PF01197 Ribosomal protein L31 CHL1_002544 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CHL1_002544 PF07498 Rho termination factor, N-terminal domain CHL1_002544 PF07497 Rho termination factor, RNA-binding domain CHL1_002548 PF01702 Queuine tRNA-ribosyltransferase CHL1_002549 PF02547 Queuosine biosynthesis protein CHL1_002550 PF17864 RuvB AAA lid domain CHL1_002550 PF05491 RuvB C-terminal winged helix domain CHL1_002550 PF05496 Holliday junction DNA helicase RuvB P-loop domain CHL1_002551 PF07499 RuvA, C-terminal domain CHL1_002551 PF01330 RuvA N terminal domain CHL1_002553 PF18073 Rubredoxin metal binding domain CHL1_002555 PF09186 Domain of unknown function (DUF1949) CHL1_002555 PF01205 Uncharacterized protein family UPF0029 CHL1_002556 PF16360 GTP-binding GTPase Middle Region CHL1_002556 PF01926 50S ribosome-binding GTPase CHL1_002556 PF13167 GTP-binding GTPase N-terminal CHL1_002557 PF02568 Thiamine biosynthesis protein (ThiI) CHL1_002557 PF02926 THUMP domain CHL1_002558 PF00266 Aminotransferase class-V CHL1_002559 PF00692 dUTPase CHL1_002560 PF00488 MutS domain V CHL1_002560 PF01713 Smr domain CHL1_002561 PF12392 Collagenase CHL1_002561 PF01136 Peptidase family U32 CHL1_002562 PF03033 Glycosyltransferase family 28 N-terminal domain CHL1_002562 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase CHL1_002565 PF02773 S-adenosylmethionine synthetase, C-terminal domain CHL1_002565 PF02772 S-adenosylmethionine synthetase, central domain CHL1_002565 PF00438 S-adenosylmethionine synthetase, N-terminal domain CHL1_002566 PF05195 Aminopeptidase P, N-terminal domain CHL1_002566 PF00557 Metallopeptidase family M24 CHL1_002568 PF01171 PP-loop family CHL1_002569 PF00486 Transcriptional regulatory protein, C terminal CHL1_002569 PF00072 Response regulator receiver domain CHL1_002570 PF13426 PAS domain CHL1_002570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHL1_002570 PF00672 HAMP domain CHL1_002570 PF00512 His Kinase A (phospho-acceptor) domain CHL1_002572 PF00391 PEP-utilising enzyme, mobile domain CHL1_002572 PF00224 Pyruvate kinase, barrel domain CHL1_002572 PF02887 Pyruvate kinase, alpha/beta domain CHL1_002573 PF00365 Phosphofructokinase CHL1_002574 PF01336 OB-fold nucleic acid binding domain CHL1_002574 PF14579 Helix-hairpin-helix motif CHL1_002574 PF07733 Bacterial DNA polymerase III alpha NTPase domain CHL1_002574 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CHL1_002574 PF02811 PHP domain CHL1_002575 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CHL1_002575 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CHL1_002576 PF04309 Glycerol-3-phosphate responsive antiterminator CHL1_002577 PF01266 FAD dependent oxidoreductase CHL1_002577 PF04324 BFD-like [2Fe-2S] binding domain CHL1_002578 PF07992 Pyridine nucleotide-disulphide oxidoreductase CHL1_002578 PF04324 BFD-like [2Fe-2S] binding domain CHL1_002582 PF03062 MBOAT, membrane-bound O-acyltransferase family CHL1_002584 PF00392 Bacterial regulatory proteins, gntR family CHL1_002584 PF07702 UTRA domain CHL1_002585 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CHL1_002585 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CHL1_002586 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CHL1_002586 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CHL1_002587 PF01791 DeoC/LacD family aldolase CHL1_002588 PF13419 Haloacid dehalogenase-like hydrolase CHL1_002589 PF02811 PHP domain CHL1_002591 PF07992 Pyridine nucleotide-disulphide oxidoreductase CHL1_002591 PF04324 BFD-like [2Fe-2S] binding domain CHL1_002592 PF01266 FAD dependent oxidoreductase CHL1_002593 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CHL1_002593 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CHL1_002594 PF10437 Bacterial lipoate protein ligase C-terminus CHL1_002594 PF03099 Biotin/lipoate A/B protein ligase family CHL1_002595 PF07992 Pyridine nucleotide-disulphide oxidoreductase CHL1_002595 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CHL1_002596 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CHL1_002596 PF00364 Biotin-requiring enzyme CHL1_002596 PF02817 e3 binding domain CHL1_002597 PF00364 Biotin-requiring enzyme CHL1_002597 PF02780 Transketolase, C-terminal domain CHL1_002597 PF02779 Transketolase, pyrimidine binding domain CHL1_002598 PF00676 Dehydrogenase E1 component CHL1_002599 PF01116 Fructose-bisphosphate aldolase class-II CHL1_002601 PF02779 Transketolase, pyrimidine binding domain CHL1_002601 PF02780 Transketolase, C-terminal domain CHL1_002602 PF00456 Transketolase, thiamine diphosphate binding domain CHL1_002608 PF01348 Type II intron maturase CHL1_002608 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CHL1_002621 PF04225 Opacity-associated protein A LysM-like domain CHL1_002621 PF01551 Peptidase family M23 CHL1_002630 PF00574 Clp protease CHL1_002635 PF02899 Phage integrase, N-terminal SAM-like domain CHL1_002635 PF00589 Phage integrase family CHL1_002657 PF01381 Helix-turn-helix CHL1_002658 PF08676 MutL C terminal dimerisation domain CHL1_002658 PF01119 DNA mismatch repair protein, C-terminal domain CHL1_002661 PF00589 Phage integrase family CHL1_002661 PF12167 Arm DNA-binding domain CHL1_002664 PF07155 ECF-type riboflavin transporter, S component CHL1_002665 PF01116 Fructose-bisphosphate aldolase class-II CHL1_002666 PF00849 RNA pseudouridylate synthase CHL1_002666 PF01479 S4 domain CHL1_002667 PF03838 Recombination protein U CHL1_002668 PF02664 S-Ribosylhomocysteinase (LuxS) CHL1_002670 PF02511 Thymidylate synthase complementing protein CHL1_002672 PF07690 Major Facilitator Superfamily CHL1_002673 PF07690 Major Facilitator Superfamily CHL1_002674 PF01144 Coenzyme A transferase CHL1_002675 PF01144 Coenzyme A transferase CHL1_002680 PF01227 GTP cyclohydrolase I CHL1_002681 PF01966 HD domain CHL1_002682 PF00809 Pterin binding enzyme CHL1_002683 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CHL1_002683 PF02152 Dihydroneopterin aldolase CHL1_002685 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CHL1_002685 PF09180 Prolyl-tRNA synthetase, C-terminal CHL1_002685 PF03129 Anticodon binding domain CHL1_002686 PF16320 Ribosomal protein L7/L12 dimerisation domain CHL1_002686 PF00542 Ribosomal protein L7/L12 C-terminal domain CHL1_002687 PF00466 Ribosomal protein L10 CHL1_002688 PF00687 Ribosomal protein L1p/L10e family CHL1_002689 PF03946 Ribosomal protein L11, N-terminal domain CHL1_002689 PF00298 Ribosomal protein L11, RNA binding domain CHL1_002690 PF00467 KOW motif CHL1_002690 PF02357 Transcription termination factor nusG CHL1_002692 PF00471 Ribosomal protein L33 CHL1_002693 PF00583 Acetyltransferase (GNAT) family CHL1_002696 PF02557 D-alanyl-D-alanine carboxypeptidase CHL1_002701 PF18537 Carbon monoxide dehydrogenase subunit alpha N-terminal domain CHL1_002701 PF03598 CO dehydrogenase/acetyl-CoA synthase complex beta subunit CHL1_002702 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CHL1_002703 PF03063 Prismane/CO dehydrogenase family CHL1_002705 PF04060 Putative Fe-S cluster CHL1_002705 PF03599 CO dehydrogenase/acetyl-CoA synthase delta subunit CHL1_002706 PF03599 CO dehydrogenase/acetyl-CoA synthase delta subunit CHL1_002709 PF00970 Oxidoreductase FAD-binding domain CHL1_002709 PF00111 2Fe-2S iron-sulfur cluster binding domain CHL1_002709 PF00175 Oxidoreductase NAD-binding domain CHL1_002710 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CHL1_002712 PF13545 Crp-like helix-turn-helix domain CHL1_002712 PF00027 Cyclic nucleotide-binding domain CHL1_002714 PF00005 ABC transporter CHL1_002715 PF01032 FecCD transport family CHL1_002718 PF00005 ABC transporter CHL1_002719 PF01032 FecCD transport family CHL1_002723 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family CHL1_002724 PF03466 LysR substrate binding domain CHL1_002724 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CHL1_002726 PF01209 ubiE/COQ5 methyltransferase family CHL1_002728 PF10609 NUBPL iron-transfer P-loop NTPase CHL1_002729 PF02001 Protein of unknown function DUF134 CHL1_002740 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CHL1_002740 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CHL1_002741 PF00403 Heavy-metal-associated domain CHL1_002742 PF00005 ABC transporter CHL1_002742 PF08402 TOBE domain CHL1_002743 PF00528 Binding-protein-dependent transport system inner membrane component CHL1_002745 PF03459 TOBE domain CHL1_002747 PF10662 Ethanolamine utilisation - propanediol utilisation CHL1_002749 PF01891 Cobalt uptake substrate-specific transmembrane region CHL1_002750 PF00005 ABC transporter CHL1_002751 PF02361 Cobalt transport protein CHL1_002752 PF01548 Transposase CHL1_002752 PF02371 Transposase IS116/IS110/IS902 family CHL1_002753 PF02571 Precorrin-6x reductase CbiJ/CobK CHL1_002754 PF01648 4'-phosphopantetheinyl transferase superfamily CHL1_002756 PF01641 SelR domain CHL1_002757 PF03190 Protein of unknown function, DUF255 CHL1_002759 PF00005 ABC transporter CHL1_002762 PF00005 ABC transporter CHL1_002763 PF00392 Bacterial regulatory proteins, gntR family CHL1_002765 PF13175 AAA ATPase domain CHL1_002766 PF13175 AAA ATPase domain CHL1_002767 PF00149 Calcineurin-like phosphoesterase CHL1_002767 PF12320 Type 5 capsule protein repressor C-terminal domain CHL1_002772 PF13333 Integrase core domain CHL1_002772 PF00665 Integrase core domain CHL1_002772 PF13276 HTH-like domain CHL1_002775 PF00072 Response regulator receiver domain CHL1_002775 PF04397 LytTr DNA-binding domain CHL1_002777 PF00999 Sodium/hydrogen exchanger family CHL1_002778 PF16325 Peptidase family U32 C-terminal domain CHL1_002778 PF01136 Peptidase family U32 CHL1_002779 PF01596 O-methyltransferase CHL1_002780 PF02618 YceG-like family CHL1_002781 PF06133 Control of competence regulator ComK, YlbF/YmcA CHL1_002782 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CHL1_002782 PF17770 Ribonuclease J C-terminal domain CHL1_002782 PF00753 Metallo-beta-lactamase superfamily CHL1_002783 PF01475 Ferric uptake regulator family CHL1_002784 PF03749 Sugar fermentation stimulation protein RE domain CHL1_002784 PF17746 SfsA N-terminal OB domain CHL1_002785 PF06949 Protein of unknown function (DUF1292) CHL1_002786 PF03652 Holliday junction resolvase CHL1_002787 PF00248 Aldo/keto reductase family CHL1_002788 PF06135 IreB regulatory phosphoprotein CHL1_002789 PF02272 DHHA1 domain CHL1_002789 PF01411 tRNA synthetases class II (A) CHL1_002789 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CHL1_002790 PF01594 AI-2E family transporter CHL1_002793 PF01592 NifU-like N terminal domain CHL1_002794 PF00266 Aminotransferase class-V CHL1_002795 PF02082 Transcriptional regulator CHL1_002796 PF02401 LytB protein CHL1_002796 PF00575 S1 RNA binding domain CHL1_002797 PF02401 LytB protein CHL1_002798 PF01553 Acyltransferase CHL1_002801 PF01418 Helix-turn-helix domain, rpiR family CHL1_002801 PF01380 SIS domain CHL1_002802 PF06962 Putative rRNA methylase CHL1_002804 PF01479 S4 domain CHL1_002804 PF00849 RNA pseudouridylate synthase CHL1_002805 PF04079 Segregation and condensation complex subunit ScpB CHL1_002806 PF02616 Segregation and condensation protein ScpA CHL1_002807 PF02163 Peptidase family M50 CHL1_002808 PF00293 NUDIX domain CHL1_002809 PF03477 ATP cone domain CHL1_002810 PF12327 FtsZ family, C-terminal domain CHL1_002810 PF00091 Tubulin/FtsZ family, GTPase domain CHL1_002811 PF03799 Cell division protein FtsQ CHL1_002811 PF08478 POTRA domain, FtsQ-type CHL1_002812 PF04101 Glycosyltransferase family 28 C-terminal domain CHL1_002812 PF03033 Glycosyltransferase family 28 N-terminal domain CHL1_002813 PF01098 Cell cycle protein CHL1_002814 PF08245 Mur ligase middle domain CHL1_002814 PF02875 Mur ligase family, glutamate ligase domain CHL1_002815 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CHL1_002815 PF00953 Glycosyl transferase family 4 CHL1_002816 PF08245 Mur ligase middle domain CHL1_002816 PF02875 Mur ligase family, glutamate ligase domain CHL1_002816 PF01225 Mur ligase family, catalytic domain CHL1_002817 PF00905 Penicillin binding protein transpeptidase domain CHL1_002817 PF03793 PASTA domain CHL1_002817 PF03717 Penicillin-binding Protein dimerisation domain CHL1_002819 PF01795 MraW methylase family CHL1_002820 PF02381 MraZ protein, putative antitoxin-like CHL1_002822 PF05167 Uncharacterised ACR (DUF711) CHL1_002826 PF13556 PucR C-terminal helix-turn-helix domain CHL1_002826 PF17853 GGDEF-like domain CHL1_002826 PF05651 Putative sugar diacid recognition CHL1_002827 PF02146 Sir2 family CHL1_002834 PF00152 tRNA synthetases class II (D, K and N) CHL1_002834 PF01336 OB-fold nucleic acid binding domain CHL1_002835 PF01272 Transcription elongation factor, GreA/GreB, C-term CHL1_002835 PF03449 Transcription elongation factor, N-terminal CHL1_002836 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CHL1_002836 PF02403 Seryl-tRNA synthetase N-terminal domain CHL1_002837 PF03699 Uncharacterised protein family (UPF0182) CHL1_002838 PF03699 Uncharacterised protein family (UPF0182) CHL1_002839 PF01427 D-ala-D-ala dipeptidase CHL1_002840 PF00005 ABC transporter CHL1_002841 PF00005 ABC transporter CHL1_002841 PF12704 MacB-like periplasmic core domain CHL1_002841 PF02687 FtsX-like permease family CHL1_002846 PF13237 4Fe-4S dicluster domain CHL1_002846 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CHL1_002846 PF10531 SLBB domain CHL1_002846 PF13375 RnfC Barrel sandwich hybrid domain CHL1_002847 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CHL1_002847 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CHL1_002848 PF04961 Formiminotransferase-cyclodeaminase CHL1_002849 PF01268 Formate--tetrahydrofolate ligase CHL1_002851 PF17763 Glutaminase/Asparaginase C-terminal domain CHL1_002851 PF00710 Asparaginase, N-terminal CHL1_002852 PF04324 BFD-like [2Fe-2S] binding domain CHL1_002852 PF07992 Pyridine nucleotide-disulphide oxidoreductase CHL1_002855 PF02607 B12 binding domain CHL1_002855 PF02310 B12 binding domain CHL1_002856 PF00939 Sodium:sulfate symporter transmembrane region CHL1_002860 PF00009 Elongation factor Tu GTP binding domain CHL1_002860 PF03143 Elongation factor Tu C-terminal domain CHL1_002860 PF03144 Elongation factor Tu domain 2 CHL1_002861 PF00679 Elongation factor G C-terminus CHL1_002861 PF14492 Elongation Factor G, domain II CHL1_002861 PF03764 Elongation factor G, domain IV CHL1_002861 PF00009 Elongation factor Tu GTP binding domain CHL1_002861 PF03144 Elongation factor Tu domain 2 CHL1_002862 PF00177 Ribosomal protein S7p/S5e CHL1_002863 PF00164 Ribosomal protein S12/S23 CHL1_002864 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family CHL1_002865 PF00623 RNA polymerase Rpb1, domain 2 CHL1_002865 PF04997 RNA polymerase Rpb1, domain 1 CHL1_002865 PF04998 RNA polymerase Rpb1, domain 5 CHL1_002865 PF05000 RNA polymerase Rpb1, domain 4 CHL1_002865 PF04983 RNA polymerase Rpb1, domain 3 CHL1_002866 PF04563 RNA polymerase beta subunit CHL1_002866 PF04561 RNA polymerase Rpb2, domain 2 CHL1_002866 PF04565 RNA polymerase Rpb2, domain 3 CHL1_002866 PF10385 RNA polymerase beta subunit external 1 domain CHL1_002866 PF00562 RNA polymerase Rpb2, domain 6 CHL1_002866 PF04560 RNA polymerase Rpb2, domain 7 CHL1_002868 PF00528 Binding-protein-dependent transport system inner membrane component CHL1_002869 PF00497 Bacterial extracellular solute-binding proteins, family 3 CHL1_002870 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CHL1_002870 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CHL1_002871 PF07969 Amidohydrolase family CHL1_002874 PF02734 DAK2 domain CHL1_002875 PF02733 Dak1 domain CHL1_002876 PF03610 PTS system fructose IIA component CHL1_002877 PF02954 Bacterial regulatory protein, Fis family CHL1_002877 PF00989 PAS fold CHL1_002877 PF00158 Sigma-54 interaction domain CHL1_002878 PF02502 Ribose/Galactose Isomerase CHL1_002879 PF00121 Triosephosphate isomerase CHL1_002881 PF00990 Diguanylate cyclase, GGDEF domain CHL1_002881 PF00072 Response regulator receiver domain CHL1_002889 PF17191 RecG wedge domain CHL1_002889 PF00270 DEAD/DEAH box helicase CHL1_002889 PF13749 Putative ATP-dependent DNA helicase recG C-terminal CHL1_002898 PF01420 Type I restriction modification DNA specificity domain CHL1_002899 PF02384 N-6 DNA Methylase CHL1_002900 PF08463 EcoEI R protein C-terminal CHL1_002900 PF00271 Helicase conserved C-terminal domain CHL1_002900 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CHL1_002900 PF04851 Type III restriction enzyme, res subunit CHL1_002903 PF01381 Helix-turn-helix CHL1_002904 PF05973 Phage derived protein Gp49-like (DUF891) CHL1_002905 PF09861 Lactate racemase N-terminal domain CHL1_002906 PF02652 L-lactate permease CHL1_002907 PF02913 FAD linked oxidases, C-terminal domain CHL1_002907 PF01565 FAD binding domain CHL1_002908 PF01012 Electron transfer flavoprotein domain CHL1_002908 PF00766 Electron transfer flavoprotein FAD-binding domain CHL1_002909 PF01012 Electron transfer flavoprotein domain CHL1_002910 PF07702 UTRA domain CHL1_002910 PF00392 Bacterial regulatory proteins, gntR family CHL1_002912 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CHL1_002912 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CHL1_002912 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CHL1_002912 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CHL1_002913 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CHL1_002913 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CHL1_002915 PF06257 Biofilm formation stimulator VEG CHL1_002916 PF13419 Haloacid dehalogenase-like hydrolase CHL1_002918 PF01817 Chorismate mutase type II CHL1_002918 PF00800 Prephenate dehydratase CHL1_002919 PF00133 tRNA synthetases class I (I, L, M and V) CHL1_002919 PF08264 Anticodon-binding domain of tRNA CHL1_002922 PF00132 Bacterial transferase hexapeptide (six repeats) CHL1_002923 PF00005 ABC transporter CHL1_002923 PF16326 ABC transporter C-terminal domain CHL1_002923 PF12848 ABC transporter CHL1_002924 PF02875 Mur ligase family, glutamate ligase domain CHL1_002924 PF08245 Mur ligase middle domain CHL1_002924 PF01225 Mur ligase family, catalytic domain CHL1_002926 PF07702 UTRA domain CHL1_002926 PF00392 Bacterial regulatory proteins, gntR family CHL1_002927 PF02607 B12 binding domain CHL1_002927 PF02310 B12 binding domain CHL1_002928 PF01226 Formate/nitrite transporter CHL1_002929 PF01226 Formate/nitrite transporter CHL1_002930 PF02607 B12 binding domain CHL1_002930 PF02310 B12 binding domain CHL1_002931 PF00403 Heavy-metal-associated domain CHL1_002932 PF00403 Heavy-metal-associated domain CHL1_002933 PF01022 Bacterial regulatory protein, arsR family CHL1_002936 PF01261 Xylose isomerase-like TIM barrel CHL1_002937 PF02535 ZIP Zinc transporter CHL1_002939 PF00365 Phosphofructokinase CHL1_002942 PF08000 Bacterial PH domain CHL1_002949 PF00392 Bacterial regulatory proteins, gntR family CHL1_002949 PF07702 UTRA domain CHL1_002950 PF02310 B12 binding domain CHL1_002950 PF02607 B12 binding domain CHL1_002951 PF06874 Firmicute fructose-1,6-bisphosphatase CHL1_002952 PF01226 Formate/nitrite transporter CHL1_002953 PF01268 Formate--tetrahydrofolate ligase CHL1_002955 PF01336 OB-fold nucleic acid binding domain CHL1_002955 PF01966 HD domain CHL1_002956 PF00155 Aminotransferase class I and II CHL1_002963 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family CHL1_002964 PF00543 Nitrogen regulatory protein P-II CHL1_002965 PF00543 Nitrogen regulatory protein P-II CHL1_002966 PF00148 Nitrogenase component 1 type Oxidoreductase CHL1_002967 PF00148 Nitrogenase component 1 type Oxidoreductase CHL1_002968 PF00148 Nitrogenase component 1 type Oxidoreductase CHL1_002969 PF02579 Dinitrogenase iron-molybdenum cofactor CHL1_002969 PF04055 Radical SAM superfamily CHL1_002972 PF00682 HMGL-like CHL1_002973 PF00381 PTS HPr component phosphorylation site CHL1_002974 PF13344 Haloacid dehalogenase-like hydrolase CHL1_002975 PF13936 Helix-turn-helix domain CHL1_002975 PF04198 Putative sugar-binding domain CHL1_002976 PF00543 Nitrogen regulatory protein P-II CHL1_002977 PF00909 Ammonium Transporter Family CHL1_002978 PF00543 Nitrogen regulatory protein P-II CHL1_002979 PF00909 Ammonium Transporter Family CHL1_002980 PF13180 PDZ domain CHL1_002981 PF00753 Metallo-beta-lactamase superfamily CHL1_002982 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CHL1_002984 PF01695 IstB-like ATP binding protein CHL1_002985 PF03705 CheR methyltransferase, all-alpha domain CHL1_002985 PF01739 CheR methyltransferase, SAM binding domain CHL1_002986 PF05175 Methyltransferase small domain CHL1_002990 PF00291 Pyridoxal-phosphate dependent enzyme CHL1_002992 PF17773 UPF0176 acylphosphatase like domain CHL1_002992 PF00581 Rhodanese-like domain CHL1_002993 PF00072 Response regulator receiver domain CHL1_002993 PF00486 Transcriptional regulatory protein, C terminal CHL1_002994 PF00672 HAMP domain CHL1_002994 PF18698 Histidine kinase sensor domain CHL1_002994 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHL1_002994 PF00512 His Kinase A (phospho-acceptor) domain CHL1_002994 PF00989 PAS fold CHL1_002999 PF00672 HAMP domain CHL1_002999 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CHL1_002999 PF02203 Tar ligand binding domain homologue CHL1_003000 PF02028 BCCT, betaine/carnitine/choline family transporter CHL1_003001 PF02028 BCCT, betaine/carnitine/choline family transporter CHL1_003002 PF02310 B12 binding domain CHL1_003002 PF02607 B12 binding domain CHL1_003003 PF06253 Trimethylamine methyltransferase (MTTB) CHL1_003004 PF02028 BCCT, betaine/carnitine/choline family transporter CHL1_003005 PF02007 Tetrahydromethanopterin S-methyltransferase MtrH subunit CHL1_003007 PF00158 Sigma-54 interaction domain CHL1_003009 PF00082 Subtilase family CHL1_003010 PF00082 Subtilase family CHL1_003012 PF01384 Phosphate transporter family CHL1_003015 PF02310 B12 binding domain CHL1_003015 PF02607 B12 binding domain CHL1_003017 PF01493 GXGXG motif CHL1_003017 PF01645 Conserved region in glutamate synthase CHL1_003017 PF04898 Glutamate synthase central domain CHL1_003017 PF00310 Glutamine amidotransferases class-II CHL1_003018 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CHL1_003018 PF07992 Pyridine nucleotide-disulphide oxidoreductase CHL1_003020 PF00561 alpha/beta hydrolase fold CHL1_003021 PF00072 Response regulator receiver domain CHL1_003021 PF01966 HD domain CHL1_003022 PF00793 DAHP synthetase I family CHL1_003023 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHL1_003023 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CHL1_003023 PF17203 Single cache domain 3 CHL1_003026 PF01208 Uroporphyrinogen decarboxylase (URO-D) CHL1_003027 PF02310 B12 binding domain CHL1_003027 PF02607 B12 binding domain CHL1_003030 PF01522 Polysaccharide deacetylase CHL1_003031 PF00990 Diguanylate cyclase, GGDEF domain CHL1_003031 PF08448 PAS fold CHL1_003032 PF00465 Iron-containing alcohol dehydrogenase CHL1_003037 PF00795 Carbon-nitrogen hydrolase CHL1_003038 PF13091 PLD-like domain CHL1_003040 PF07683 Cobalamin synthesis protein cobW C-terminal domain CHL1_003040 PF02492 CobW/HypB/UreG, nucleotide-binding domain CHL1_003042 PF00245 Alkaline phosphatase CHL1_003043 PF00072 Response regulator receiver domain CHL1_003043 PF00196 Bacterial regulatory proteins, luxR family CHL1_003044 PF07730 Histidine kinase CHL1_003044 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHL1_003045 PF00005 ABC transporter CHL1_003048 PF00291 Pyridoxal-phosphate dependent enzyme CHL1_003050 PF07992 Pyridine nucleotide-disulphide oxidoreductase CHL1_003050 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CHL1_003051 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CHL1_003051 PF07992 Pyridine nucleotide-disulphide oxidoreductase CHL1_003054 PF00563 EAL domain CHL1_003054 PF00360 Phytochrome region CHL1_003054 PF00990 Diguanylate cyclase, GGDEF domain CHL1_003054 PF01590 GAF domain CHL1_003055 PF00282 Pyridoxal-dependent decarboxylase conserved domain CHL1_003073 PF04002 RadC-like JAB domain CHL1_003079 PF09565 NgoFVII restriction endonuclease CHL1_003080 PF00145 C-5 cytosine-specific DNA methylase CHL1_003081 PF03852 DNA mismatch endonuclease Vsr CHL1_003085 PF01063 Amino-transferase class IV CHL1_003087 PF14815 NUDIX domain CHL1_003087 PF00730 HhH-GPD superfamily base excision DNA repair protein CHL1_003087 PF00633 Helix-hairpin-helix motif CHL1_003088 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CHL1_003088 PF01871 AMMECR1 CHL1_003089 PF03952 Enolase, N-terminal domain CHL1_003089 PF00113 Enolase, C-terminal TIM barrel domain CHL1_003091 PF00501 AMP-binding enzyme CHL1_003091 PF14535 AMP-binding enzyme C-terminal domain CHL1_003092 PF00580 UvrD/REP helicase N-terminal domain CHL1_003092 PF13361 UvrD-like helicase C-terminal domain CHL1_003097 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CHL1_003097 PF03466 LysR substrate binding domain CHL1_003098 PF00465 Iron-containing alcohol dehydrogenase CHL1_003101 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CHL1_003101 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CHL1_003101 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CHL1_003102 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CHL1_003103 PF01880 Desulfoferrodoxin CHL1_003103 PF06397 Desulfoferrodoxin, N-terminal domain CHL1_003104 PF00465 Iron-containing alcohol dehydrogenase CHL1_003107 PF12838 4Fe-4S dicluster domain CHL1_003113 PF01648 4'-phosphopantetheinyl transferase superfamily CHL1_003132 PF01551 Peptidase family M23 CHL1_003132 PF10145 Phage-related minor tail protein CHL1_003132 PF01464 Transglycosylase SLT domain CHL1_003179 PF01726 LexA DNA binding domain CHL1_003179 PF00717 Peptidase S24-like CHL1_003181 PF14659 Phage integrase, N-terminal SAM-like domain CHL1_003181 PF00589 Phage integrase family CHL1_003183 PF01026 TatD related DNase CHL1_003184 PF01743 Poly A polymerase head domain CHL1_003184 PF12627 Probable RNA and SrmB- binding site of polymerase A CHL1_003184 PF13735 tRNA nucleotidyltransferase domain 2 putative CHL1_003186 PF01063 Amino-transferase class IV CHL1_003187 PF04715 Anthranilate synthase component I, N terminal region CHL1_003187 PF00425 chorismate binding enzyme CHL1_003188 PF00117 Glutamine amidotransferase class-I CHL1_003191 PF06081 Aromatic acid exporter family member 1 CHL1_003193 PF00793 DAHP synthetase I family CHL1_003193 PF18152 DAHP synthase ferredoxin-like domain CHL1_003194 PF01053 Cys/Met metabolism PLP-dependent enzyme CHL1_003195 PF04204 Homoserine O-succinyltransferase CHL1_003197 PF01636 Phosphotransferase enzyme family CHL1_003198 PF03649 Uncharacterised protein family (UPF0014) CHL1_003199 PF00005 ABC transporter CHL1_003200 PF00881 Nitroreductase family CHL1_003200 PF01996 F420-0:Gamma-glutamyl ligase CHL1_003201 PF02673 Bacitracin resistance protein BacA CHL1_003203 PF00484 Carbonic anhydrase CHL1_003204 PF00990 Diguanylate cyclase, GGDEF domain CHL1_003204 PF00072 Response regulator receiver domain CHL1_003205 PF00512 His Kinase A (phospho-acceptor) domain CHL1_003205 PF01627 Hpt domain CHL1_003205 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CHL1_003205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHL1_003205 PF00072 Response regulator receiver domain CHL1_003205 PF00672 HAMP domain CHL1_003206 PF03705 CheR methyltransferase, all-alpha domain CHL1_003206 PF01339 CheB methylesterase CHL1_003206 PF01739 CheR methyltransferase, SAM binding domain CHL1_003206 PF08448 PAS fold CHL1_003207 PF00072 Response regulator receiver domain CHL1_003207 PF01966 HD domain CHL1_003208 PF08448 PAS fold CHL1_003208 PF00990 Diguanylate cyclase, GGDEF domain CHL1_003209 PF03851 UV-endonuclease UvdE CHL1_003210 PF00072 Response regulator receiver domain CHL1_003210 PF01966 HD domain CHL1_003213 PF00005 ABC transporter CHL1_003214 PF00528 Binding-protein-dependent transport system inner membrane component CHL1_003215 PF00497 Bacterial extracellular solute-binding proteins, family 3 CHL1_003218 PF12792 CSS motif domain associated with EAL CHL1_003218 PF00563 EAL domain CHL1_003219 PF00465 Iron-containing alcohol dehydrogenase CHL1_003220 PF01966 HD domain CHL1_003221 PF00072 Response regulator receiver domain CHL1_003226 PF01209 ubiE/COQ5 methyltransferase family CHL1_003227 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CHL1_003228 PF16653 Saccharopine dehydrogenase C-terminal domain CHL1_003228 PF03435 Saccharopine dehydrogenase NADP binding domain CHL1_003229 PF00491 Arginase family CHL1_003230 PF17284 Spermidine synthase tetramerisation domain CHL1_003231 PF01276 Orn/Lys/Arg decarboxylase, major domain CHL1_003231 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CHL1_003232 PF02675 S-adenosylmethionine decarboxylase CHL1_003233 PF00072 Response regulator receiver domain CHL1_003233 PF01627 Hpt domain CHL1_003233 PF00512 His Kinase A (phospho-acceptor) domain CHL1_003233 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHL1_003233 PF00672 HAMP domain CHL1_003233 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CHL1_003234 PF00512 His Kinase A (phospho-acceptor) domain CHL1_003234 PF01627 Hpt domain CHL1_003234 PF00672 HAMP domain CHL1_003234 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHL1_003234 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CHL1_003234 PF00072 Response regulator receiver domain CHL1_003235 PF00072 Response regulator receiver domain CHL1_003236 PF02080 TrkA-C domain CHL1_003236 PF02254 TrkA-N domain CHL1_003237 PF02254 TrkA-N domain CHL1_003237 PF02080 TrkA-C domain CHL1_003238 PF00690 Cation transporter/ATPase, N-terminus CHL1_003238 PF00689 Cation transporting ATPase, C-terminus CHL1_003240 PF13538 UvrD-like helicase C-terminal domain CHL1_003242 PF02310 B12 binding domain CHL1_003242 PF02607 B12 binding domain CHL1_003247 PF00950 ABC 3 transport family CHL1_003248 PF00005 ABC transporter CHL1_003249 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment CHL1_003249 PF01297 Zinc-uptake complex component A periplasmic CHL1_003251 PF01966 HD domain CHL1_003251 PF00072 Response regulator receiver domain CHL1_003252 PF08543 Phosphomethylpyrimidine kinase CHL1_003252 PF02581 Thiamine monophosphate synthase CHL1_003253 PF13419 Haloacid dehalogenase-like hydrolase CHL1_003254 PF02581 Thiamine monophosphate synthase CHL1_003255 PF02110 Hydroxyethylthiazole kinase family CHL1_003256 PF13187 4Fe-4S dicluster domain CHL1_003256 PF04060 Putative Fe-S cluster CHL1_003257 PF02508 Rnf-Nqr subunit, membrane protein CHL1_003258 PF02508 Rnf-Nqr subunit, membrane protein CHL1_003259 PF04205 FMN-binding domain CHL1_003260 PF03116 NQR2, RnfD, RnfE family CHL1_003261 PF13375 RnfC Barrel sandwich hybrid domain CHL1_003261 PF10531 SLBB domain CHL1_003261 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CHL1_003261 PF13237 4Fe-4S dicluster domain CHL1_003263 PF02683 Cytochrome C biogenesis protein transmembrane region CHL1_003264 PF00578 AhpC/TSA family CHL1_003266 PF00027 Cyclic nucleotide-binding domain CHL1_003266 PF13545 Crp-like helix-turn-helix domain CHL1_003267 PF00085 Thioredoxin CHL1_003268 PF11208 Protein of unknown function (DUF2992) CHL1_003269 PF00005 ABC transporter CHL1_003269 PF00664 ABC transporter transmembrane region CHL1_003270 PF00664 ABC transporter transmembrane region CHL1_003270 PF00005 ABC transporter CHL1_003271 PF00664 ABC transporter transmembrane region CHL1_003271 PF00005 ABC transporter CHL1_003272 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CHL1_003272 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CHL1_003273 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family CHL1_003274 PF00209 Sodium:neurotransmitter symporter family CHL1_003277 PF01483 Proprotein convertase P-domain CHL1_003277 PF00082 Subtilase family CHL1_003279 PF13276 HTH-like domain CHL1_003279 PF00665 Integrase core domain CHL1_003279 PF13333 Integrase core domain CHL1_003281 PF02350 UDP-N-acetylglucosamine 2-epimerase CHL1_003283 PF01370 NAD dependent epimerase/dehydratase family CHL1_003284 PF08485 Polysaccharide biosynthesis protein C-terminal CHL1_003284 PF02719 Polysaccharide biosynthesis protein CHL1_003292 PF13439 Glycosyltransferase Family 4 CHL1_003292 PF00534 Glycosyl transferases group 1 CHL1_003293 PF00535 Glycosyl transferase family 2 CHL1_003295 PF00534 Glycosyl transferases group 1 CHL1_003295 PF13439 Glycosyltransferase Family 4 CHL1_003296 PF03808 Glycosyl transferase WecB/TagA/CpsF family CHL1_003297 PF02397 Bacterial sugar transferase CHL1_003301 PF13614 AAA domain CHL1_003301 PF13807 G-rich domain on putative tyrosine kinase CHL1_003301 PF02706 Chain length determinant protein CHL1_003302 PF02706 Chain length determinant protein CHL1_003304 PF03477 ATP cone domain CHL1_003304 PF13597 Anaerobic ribonucleoside-triphosphate reductase CHL1_003308 PF07690 Major Facilitator Superfamily CHL1_003309 PF00672 HAMP domain CHL1_003309 PF00512 His Kinase A (phospho-acceptor) domain CHL1_003309 PF01627 Hpt domain CHL1_003309 PF00072 Response regulator receiver domain CHL1_003309 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CHL1_003309 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHL1_003310 PF00072 Response regulator receiver domain CHL1_003311 PF00132 Bacterial transferase hexapeptide (six repeats) CHL1_003314 PF10415 Fumarase C C-terminus CHL1_003314 PF00206 Lyase CHL1_003315 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CHL1_003315 PF01926 50S ribosome-binding GTPase CHL1_003316 PF01032 FecCD transport family CHL1_003317 PF00005 ABC transporter CHL1_003319 PF02492 CobW/HypB/UreG, nucleotide-binding domain CHL1_003320 PF12704 MacB-like periplasmic core domain CHL1_003320 PF02687 FtsX-like permease family CHL1_003320 PF00005 ABC transporter CHL1_003324 PF03707 Bacterial signalling protein N terminal repeat CHL1_003324 PF00563 EAL domain CHL1_003324 PF00990 Diguanylate cyclase, GGDEF domain CHL1_003326 PF02557 D-alanyl-D-alanine carboxypeptidase CHL1_003327 PF00892 EamA-like transporter family CHL1_003328 PF02311 AraC-like ligand binding domain CHL1_003328 PF12833 Helix-turn-helix domain CHL1_003329 PF02634 FdhD/NarQ family CHL1_003330 PF17853 GGDEF-like domain CHL1_003330 PF13556 PucR C-terminal helix-turn-helix domain CHL1_003330 PF05651 Putative sugar diacid recognition CHL1_003331 PF00465 Iron-containing alcohol dehydrogenase CHL1_003332 PF07992 Pyridine nucleotide-disulphide oxidoreductase CHL1_003332 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CHL1_003333 PF00990 Diguanylate cyclase, GGDEF domain CHL1_003333 PF08448 PAS fold CHL1_003337 PF11954 Domain of unknown function (DUF3471) CHL1_003337 PF00144 Beta-lactamase CHL1_003338 PF00144 Beta-lactamase CHL1_003338 PF07930 D-aminopeptidase, domain B CHL1_003339 PF01699 Sodium/calcium exchanger protein CHL1_003340 PF05230 MASE2 domain CHL1_003340 PF00990 Diguanylate cyclase, GGDEF domain CHL1_003344 PF04226 Transglycosylase associated protein CHL1_003345 PF04607 Region found in RelA / SpoT proteins CHL1_003346 PF02915 Rubrerythrin CHL1_003349 PF06463 Molybdenum Cofactor Synthesis C CHL1_003349 PF04055 Radical SAM superfamily CHL1_003350 PF13478 XdhC Rossmann domain CHL1_003350 PF02625 XdhC and CoxI family CHL1_003356 PF09861 Lactate racemase N-terminal domain CHL1_003357 PF00390 Malic enzyme, N-terminal domain CHL1_003357 PF03949 Malic enzyme, NAD binding domain CHL1_003358 PF00162 Phosphoglycerate kinase CHL1_003361 PF07992 Pyridine nucleotide-disulphide oxidoreductase CHL1_003361 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CHL1_003362 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CHL1_003362 PF02817 e3 binding domain CHL1_003362 PF00364 Biotin-requiring enzyme CHL1_003363 PF02780 Transketolase, C-terminal domain CHL1_003363 PF00364 Biotin-requiring enzyme CHL1_003363 PF02779 Transketolase, pyrimidine binding domain CHL1_003364 PF00676 Dehydrogenase E1 component CHL1_003365 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CHL1_003365 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CHL1_003366 PF00753 Metallo-beta-lactamase superfamily CHL1_003368 PF00111 2Fe-2S iron-sulfur cluster binding domain CHL1_003368 PF01799 [2Fe-2S] binding domain CHL1_003369 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CHL1_003369 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CHL1_003370 PF07729 FCD domain CHL1_003370 PF00392 Bacterial regulatory proteins, gntR family CHL1_003372 PF02203 Tar ligand binding domain homologue CHL1_003372 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CHL1_003372 PF00672 HAMP domain CHL1_003373 PF03412 Peptidase C39 family CHL1_003373 PF00664 ABC transporter transmembrane region CHL1_003373 PF00005 ABC transporter CHL1_003374 PF00005 ABC transporter CHL1_003374 PF03412 Peptidase C39 family CHL1_003374 PF00664 ABC transporter transmembrane region CHL1_003386 PF08279 HTH domain CHL1_003386 PF13280 WYL domain CHL1_003387 PF03009 Glycerophosphoryl diester phosphodiesterase family CHL1_003388 PF03009 Glycerophosphoryl diester phosphodiesterase family CHL1_003390 PF03641 Possible lysine decarboxylase CHL1_003392 PF01638 HxlR-like helix-turn-helix CHL1_003393 PF00302 Chloramphenicol acetyltransferase CHL1_003395 PF01381 Helix-turn-helix CHL1_003396 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CHL1_003396 PF02896 PEP-utilising enzyme, TIM barrel domain CHL1_003396 PF00391 PEP-utilising enzyme, mobile domain CHL1_003397 PF00391 PEP-utilising enzyme, mobile domain CHL1_003397 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CHL1_003397 PF02896 PEP-utilising enzyme, TIM barrel domain CHL1_003400 PF00528 Binding-protein-dependent transport system inner membrane component CHL1_003401 PF00497 Bacterial extracellular solute-binding proteins, family 3 CHL1_003405 PF07228 Stage II sporulation protein E (SpoIIE) CHL1_003405 PF00672 HAMP domain CHL1_003406 PF01554 MatE CHL1_003407 PF00486 Transcriptional regulatory protein, C terminal CHL1_003407 PF00072 Response regulator receiver domain CHL1_003408 PF18698 Histidine kinase sensor domain CHL1_003408 PF00512 His Kinase A (phospho-acceptor) domain CHL1_003408 PF00672 HAMP domain CHL1_003408 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHL1_003409 PF00005 ABC transporter CHL1_003413 PF12706 Beta-lactamase superfamily domain CHL1_003414 PF01554 MatE CHL1_003416 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CHL1_003418 PF02310 B12 binding domain CHL1_003418 PF02607 B12 binding domain CHL1_003419 PF03831 PhnA domain CHL1_003419 PF08274 PhnA Zinc-Ribbon CHL1_003420 PF06580 Histidine kinase CHL1_003420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHL1_003421 PF00072 Response regulator receiver domain CHL1_003421 PF04397 LytTr DNA-binding domain CHL1_003422 PF00990 Diguanylate cyclase, GGDEF domain CHL1_003422 PF17158 Membrane-associated sensor, integral membrane domain CHL1_003423 PF00664 ABC transporter transmembrane region CHL1_003423 PF00005 ABC transporter CHL1_003424 PF00664 ABC transporter transmembrane region CHL1_003424 PF00005 ABC transporter CHL1_003431 PF00248 Aldo/keto reductase family CHL1_003433 PF00132 Bacterial transferase hexapeptide (six repeats) CHL1_003435 PF00248 Aldo/keto reductase family CHL1_003436 PF01969 Protein of unknown function DUF111 CHL1_003437 PF00731 AIR carboxylase CHL1_003440 PF13411 MerR HTH family regulatory protein CHL1_003446 PF00248 Aldo/keto reductase family CHL1_003448 PF00990 Diguanylate cyclase, GGDEF domain CHL1_003454 PF00672 HAMP domain CHL1_003454 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHL1_003454 PF00512 His Kinase A (phospho-acceptor) domain CHL1_003455 PF00072 Response regulator receiver domain CHL1_003455 PF00486 Transcriptional regulatory protein, C terminal CHL1_003456 PF00990 Diguanylate cyclase, GGDEF domain CHL1_003457 PF07556 Protein of unknown function (DUF1538) CHL1_003459 PF04055 Radical SAM superfamily CHL1_003459 PF06463 Molybdenum Cofactor Synthesis C CHL1_003463 PF01636 Phosphotransferase enzyme family CHL1_003464 PF07690 Major Facilitator Superfamily CHL1_003465 PF17922 Tetracyclin repressor-like, C-terminal domain CHL1_003465 PF00440 Bacterial regulatory proteins, tetR family CHL1_003467 PF07690 Major Facilitator Superfamily CHL1_003469 PF05231 MASE1 CHL1_003469 PF00563 EAL domain CHL1_003470 PF17152 Periplasmic sensor domain CHL1_003470 PF00990 Diguanylate cyclase, GGDEF domain CHL1_003473 PF01966 HD domain CHL1_003478 PF13333 Integrase core domain CHL1_003478 PF00665 Integrase core domain CHL1_003478 PF13276 HTH-like domain CHL1_003481 PF13302 Acetyltransferase (GNAT) domain CHL1_003483 PF00274 Fructose-bisphosphate aldolase class-I CHL1_003485 PF13538 UvrD-like helicase C-terminal domain CHL1_003486 PF00665 Integrase core domain CHL1_003486 PF13276 HTH-like domain CHL1_003486 PF13333 Integrase core domain CHL1_003489 PF12833 Helix-turn-helix domain CHL1_003490 PF01381 Helix-turn-helix CHL1_003493 PF07859 alpha/beta hydrolase fold CHL1_003496 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CHL1_003496 PF03466 LysR substrate binding domain CHL1_003497 PF00892 EamA-like transporter family CHL1_003498 PF16123 Hydroxyacylglutathione hydrolase C-terminus CHL1_003498 PF00753 Metallo-beta-lactamase superfamily CHL1_003499 PF00805 Pentapeptide repeats (8 copies) CHL1_003501 PF01810 LysE type translocator CHL1_003503 PF12697 Alpha/beta hydrolase family CHL1_003510 PF04542 Sigma-70 region 2 CHL1_003510 PF08281 Sigma-70, region 4 CHL1_003512 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHL1_003512 PF00672 HAMP domain CHL1_003512 PF00512 His Kinase A (phospho-acceptor) domain CHL1_003513 PF00486 Transcriptional regulatory protein, C terminal CHL1_003513 PF00072 Response regulator receiver domain CHL1_003514 PF17151 Periplasmic sensor domain CHL1_003514 PF00990 Diguanylate cyclase, GGDEF domain CHL1_003516 PF13091 PLD-like domain CHL1_003516 PF13396 Phospholipase_D-nuclease N-terminal CHL1_003518 PF00005 ABC transporter CHL1_003523 PF06100 MCRA family CHL1_003524 PF00440 Bacterial regulatory proteins, tetR family CHL1_003526 PF07690 Major Facilitator Superfamily CHL1_003529 PF00665 Integrase core domain CHL1_003529 PF13276 HTH-like domain CHL1_003529 PF13333 Integrase core domain CHL1_003531 PF03193 RsgA GTPase CHL1_003532 PF02687 FtsX-like permease family CHL1_003532 PF00005 ABC transporter CHL1_003532 PF12704 MacB-like periplasmic core domain CHL1_003535 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CHL1_003536 PF00672 HAMP domain CHL1_003536 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CHL1_003536 PF02203 Tar ligand binding domain homologue CHL1_003538 PF08331 Domain of unknown function (DUF1730) CHL1_003539 PF00892 EamA-like transporter family CHL1_003541 PF02558 Ketopantoate reductase PanE/ApbA CHL1_003541 PF08546 Ketopantoate reductase PanE/ApbA C terminal CHL1_003545 PF02229 Transcriptional Coactivator p15 (PC4) CHL1_003546 PF17762 HTH domain found in ParB protein CHL1_003546 PF02195 ParB-like nuclease domain CHL1_003547 PF01076 Plasmid recombination enzyme CHL1_003553 PF03764 Elongation factor G, domain IV CHL1_003553 PF00679 Elongation factor G C-terminus CHL1_003553 PF00009 Elongation factor Tu GTP binding domain CHL1_003553 PF14492 Elongation Factor G, domain II CHL1_003556 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CHL1_003558 PF01548 Transposase CHL1_003558 PF02371 Transposase IS116/IS110/IS902 family CHL1_003564 PF02311 AraC-like ligand binding domain CHL1_003564 PF12833 Helix-turn-helix domain CHL1_003566 PF01548 Transposase CHL1_003566 PF02371 Transposase IS116/IS110/IS902 family CHL1_003567 PF02567 Phenazine biosynthesis-like protein CHL1_003577 PF02824 TGS domain CHL1_003577 PF13291 ACT domain CHL1_003577 PF04607 Region found in RelA / SpoT proteins CHL1_003578 PF00403 Heavy-metal-associated domain CHL1_003579 PF01022 Bacterial regulatory protein, arsR family CHL1_003581 PF00672 HAMP domain CHL1_003581 PF01966 HD domain CHL1_003587 PF01047 MarR family CHL1_003588 PF00378 Enoyl-CoA hydratase/isomerase CHL1_003589 PF03466 LysR substrate binding domain CHL1_003589 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CHL1_003605 PF13166 AAA domain CHL1_003607 PF06445 GyrI-like small molecule binding domain CHL1_003607 PF12833 Helix-turn-helix domain CHL1_003610 PF00132 Bacterial transferase hexapeptide (six repeats) CHL1_003612 PF00005 ABC transporter CHL1_003612 PF12848 ABC transporter CHL1_003613 PF07690 Major Facilitator Superfamily CHL1_003615 PF01938 TRAM domain CHL1_003615 PF05958 tRNA (Uracil-5-)-methyltransferase CHL1_003618 PF00085 Thioredoxin CHL1_003622 PF00301 Rubredoxin CHL1_003623 PF00037 4Fe-4S binding domain CHL1_003624 PF04468 PSP1 C-terminal conserved region CHL1_003627 PF02223 Thymidylate kinase CHL1_003629 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CHL1_003629 PF01276 Orn/Lys/Arg decarboxylase, major domain CHL1_003630 PF00085 Thioredoxin CHL1_003631 PF01588 Putative tRNA binding domain CHL1_003631 PF09334 tRNA synthetases class I (M) CHL1_003631 PF08264 Anticodon-binding domain of tRNA CHL1_003632 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CHL1_003633 PF07992 Pyridine nucleotide-disulphide oxidoreductase CHL1_003633 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CHL1_003634 PF00772 DnaB-like helicase N terminal domain CHL1_003634 PF03796 DnaB-like helicase C terminal domain CHL1_003635 PF03948 Ribosomal protein L9, C-terminal domain CHL1_003635 PF01281 Ribosomal protein L9, N-terminal domain CHL1_003636 PF01368 DHH family CHL1_003636 PF02272 DHHA1 domain CHL1_003637 PF09991 Predicted membrane protein (DUF2232) CHL1_003638 PF01084 Ribosomal protein S18 CHL1_003639 PF00436 Single-strand binding protein family CHL1_003640 PF01250 Ribosomal protein S6 CHL1_003643 PF00924 Mechanosensitive ion channel CHL1_003646 PF02195 ParB-like nuclease domain CHL1_003646 PF17762 HTH domain found in ParB protein CHL1_003647 PF13614 AAA domain CHL1_003648 PF02527 rRNA small subunit methyltransferase G CHL1_003649 PF01134 Glucose inhibited division protein A CHL1_003649 PF13932 GidA associated domain CHL1_003650 PF01926 50S ribosome-binding GTPase CHL1_003650 PF12631 MnmE helical domain CHL1_003650 PF10396 GTP-binding protein TrmE N-terminus CHL1_003651 PF14804 Jag N-terminus CHL1_003651 PF01424 R3H domain CHL1_003652 PF02096 60Kd inner membrane protein CHL1_003653 PF01809 Putative membrane protein insertion efficiency factor CHL1_003654 PF00825 Ribonuclease P CHL1_003655 PF00468 Ribosomal protein L34 CHL1_003656 PF08299 Bacterial dnaA protein helix-turn-helix CHL1_003656 PF00308 Bacterial dnaA protein CHL1_003656 PF11638 DnaA N-terminal domain