locus-tag class description BN85300010 PF11638 DnaA N-terminal domain BN85300010 PF08299 Bacterial dnaA protein helix-turn-helix BN85300010 PF00308 Bacterial dnaA protein BN85300020 PF00712 DNA polymerase III beta subunit, N-terminal domain BN85300020 PF02768 DNA polymerase III beta subunit, C-terminal domain BN85300020 PF02767 DNA polymerase III beta subunit, central domain BN85300040 PF02463 RecF/RecN/SMC N terminal domain BN85300050 PF00986 DNA gyrase B subunit, carboxyl terminus BN85300050 PF00204 DNA gyrase B BN85300050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BN85300050 PF01751 Toprim domain BN85300060 PF03989 DNA gyrase C-terminal domain, beta-propeller BN85300060 PF00521 DNA gyrase/topoisomerase IV, subunit A BN85300070 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BN85300070 PF02403 Seryl-tRNA synthetase N-terminal domain BN85300080 PF00072 Response regulator receiver domain BN85300080 PF00486 Transcriptional regulatory protein, C terminal BN85300090 PF00672 HAMP domain BN85300090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BN85300090 PF00512 His Kinase A (phospho-acceptor) domain BN85300100 PF01230 HIT domain BN85300110 PF06130 Phosphate propanoyltransferase BN85300120 PF01966 HD domain BN85300130 PF13331 Domain of unknown function (DUF4093) BN85300130 PF01751 Toprim domain BN85300140 PF00398 Ribosomal RNA adenine dimethylase BN85300150 PF00288 GHMP kinases N terminal domain BN85300150 PF08544 GHMP kinases C terminal BN85300160 PF14572 Phosphoribosyl synthetase-associated domain BN85300160 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BN85300170 PF01195 Peptidyl-tRNA hydrolase BN85300180 PF00271 Helicase conserved C-terminal domain BN85300180 PF17757 UvrB interaction domain BN85300180 PF03461 TRCF domain BN85300180 PF02559 CarD-like/TRCF domain BN85300180 PF00270 DEAD/DEAH box helicase BN85300200 PF13361 UvrD-like helicase C-terminal domain BN85300200 PF12705 PD-(D/E)XK nuclease superfamily BN85300200 PF00580 UvrD/REP helicase N-terminal domain BN85300220 PF00149 Calcineurin-like phosphoesterase BN85300220 PF12320 Type 5 capsule protein repressor C-terminal domain BN85300230 PF13476 AAA domain BN85300240 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BN85300240 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BN85300260 PF00924 Mechanosensitive ion channel BN85300280 PF00709 Adenylosuccinate synthetase BN85300290 PF02719 Polysaccharide biosynthesis protein BN85300300 PF01380 SIS domain BN85300310 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BN85300310 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BN85300310 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BN85300310 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BN85300320 PF00132 Bacterial transferase hexapeptide (six repeats) BN85300320 PF00483 Nucleotidyl transferase BN85300330 PF13086 AAA domain BN85300330 PF13087 AAA domain BN85300330 PF13195 Protein of unknown function (DUF4011) BN85300350 PF10437 Bacterial lipoate protein ligase C-terminus BN85300350 PF03099 Biotin/lipoate A/B protein ligase family BN85300360 PF01571 Aminomethyltransferase folate-binding domain BN85300360 PF08669 Glycine cleavage T-protein C-terminal barrel domain BN85300370 PF01597 Glycine cleavage H-protein BN85300380 PF02347 Glycine cleavage system P-protein BN85300390 PF02347 Glycine cleavage system P-protein BN85300400 PF01266 FAD dependent oxidoreductase BN85300410 PF07992 Pyridine nucleotide-disulphide oxidoreductase BN85300450 PF00291 Pyridoxal-phosphate dependent enzyme BN85300470 PF00106 short chain dehydrogenase BN85300510 PF00072 Response regulator receiver domain BN85300520 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BN85300520 PF00672 HAMP domain BN85300520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BN85300520 PF00512 His Kinase A (phospho-acceptor) domain BN85300520 PF01627 Hpt domain BN85300520 PF00072 Response regulator receiver domain BN85300560 PF00294 pfkB family carbohydrate kinase BN85300690 PF01266 FAD dependent oxidoreductase BN85300700 PF07992 Pyridine nucleotide-disulphide oxidoreductase BN85300720 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BN85300720 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BN85300740 PF02899 Phage integrase, N-terminal SAM-like domain BN85300740 PF00589 Phage integrase family BN85300750 PF00589 Phage integrase family BN85300750 PF02899 Phage integrase, N-terminal SAM-like domain BN85300780 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BN85300790 PF02397 Bacterial sugar transferase BN85300810 PF00534 Glycosyl transferases group 1 BN85300810 PF13439 Glycosyltransferase Family 4 BN85300850 PF13439 Glycosyltransferase Family 4 BN85300850 PF00534 Glycosyl transferases group 1 BN85300890 PF02350 UDP-N-acetylglucosamine 2-epimerase BN85300900 PF08220 DeoR-like helix-turn-helix domain BN85300900 PF00455 DeoR C terminal sensor domain BN85300910 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BN85300910 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BN85300920 PF06134 L-rhamnose isomerase (RhaA) BN85300930 PF00596 Class II Aldolase and Adducin N-terminal domain BN85300960 PF00528 Binding-protein-dependent transport system inner membrane component BN85300980 PF00528 Binding-protein-dependent transport system inner membrane component BN85301110 PF00005 ABC transporter BN85301120 PF00005 ABC transporter BN85301140 PF02397 Bacterial sugar transferase BN85301150 PF00534 Glycosyl transferases group 1 BN85301150 PF13439 Glycosyltransferase Family 4 BN85301160 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BN85301160 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BN85301160 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BN85301170 PF01370 NAD dependent epimerase/dehydratase family BN85301180 PF00534 Glycosyl transferases group 1 BN85301180 PF13439 Glycosyltransferase Family 4 BN85301190 PF01522 Polysaccharide deacetylase BN85301210 PF02388 FemAB family BN85301220 PF03023 Lipid II flippase MurJ BN85301230 PF13439 Glycosyltransferase Family 4 BN85301230 PF00534 Glycosyl transferases group 1 BN85301260 PF00145 C-5 cytosine-specific DNA methylase BN85301260 PF01381 Helix-turn-helix BN85301310 PF00005 ABC transporter BN85301310 PF02687 FtsX-like permease family BN85301310 PF12704 MacB-like periplasmic core domain BN85301360 PF01381 Helix-turn-helix BN85301370 PF01381 Helix-turn-helix BN85301390 PF07581 The GLUG motif BN85301390 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) BN85301400 PF01527 Transposase BN85301410 PF13333 Integrase core domain BN85301410 PF13276 HTH-like domain BN85301410 PF00665 Integrase core domain BN85301440 PF00005 ABC transporter BN85301450 PF12704 MacB-like periplasmic core domain BN85301450 PF02687 FtsX-like permease family BN85301450 PF00005 ABC transporter BN85301470 PF00571 CBS domain BN85301470 PF00478 IMP dehydrogenase / GMP reductase domain BN85301480 PF02540 NAD synthase BN85301480 PF00958 GMP synthase C terminal domain BN85301480 PF00117 Glutamine amidotransferase class-I BN85301620 PF00459 Inositol monophosphatase family BN85301630 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BN85301630 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BN85301720 PF00266 Aminotransferase class-V BN85301730 PF00120 Glutamine synthetase, catalytic domain BN85301730 PF03951 Glutamine synthetase, beta-Grasp domain BN85301740 PF12833 Helix-turn-helix domain BN85301740 PF00072 Response regulator receiver domain BN85301750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BN85301750 PF00672 HAMP domain BN85301750 PF02743 Cache domain BN85301750 PF06580 Histidine kinase BN85301760 PF13407 Periplasmic binding protein domain BN85301770 PF13407 Periplasmic binding protein domain BN85301780 PF00005 ABC transporter BN85301790 PF02653 Branched-chain amino acid transport system / permease component BN85301830 PF04397 LytTr DNA-binding domain BN85301830 PF00072 Response regulator receiver domain BN85301840 PF07992 Pyridine nucleotide-disulphide oxidoreductase BN85301850 PF02901 Pyruvate formate lyase-like BN85301850 PF01228 Glycine radical BN85301860 PF04055 Radical SAM superfamily BN85301870 PF01554 MatE BN85301900 PF00294 pfkB family carbohydrate kinase BN85301910 PF01156 Inosine-uridine preferring nucleoside hydrolase BN85301920 PF03606 C4-dicarboxylate anaerobic carrier BN85301930 PF16363 GDP-mannose 4,6 dehydratase BN85301960 PF01268 Formate--tetrahydrofolate ligase BN85301970 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BN85301970 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BN85301980 PF10397 Adenylosuccinate lyase C-terminus BN85301980 PF00206 Lyase BN85301990 PF00258 Flavodoxin BN85302000 PF00860 Permease family BN85302010 PF00719 Inorganic pyrophosphatase BN85302020 PF01709 Transcriptional regulator BN85302030 PF00156 Phosphoribosyl transferase domain BN85302040 PF00464 Serine hydroxymethyltransferase BN85302050 PF13375 RnfC Barrel sandwich hybrid domain BN85302050 PF12838 4Fe-4S dicluster domain BN85302050 PF10531 SLBB domain BN85302050 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BN85302060 PF03116 NQR2, RnfD, RnfE family BN85302090 PF02508 Rnf-Nqr subunit, membrane protein BN85302100 PF02508 Rnf-Nqr subunit, membrane protein BN85302120 PF00037 4Fe-4S binding domain BN85302120 PF13187 4Fe-4S dicluster domain BN85302120 PF04060 Putative Fe-S cluster BN85302160 PF01197 Ribosomal protein L31 BN85302170 PF00265 Thymidine kinase BN85302180 PF14437 MafB19-like deaminase BN85302190 PF03116 NQR2, RnfD, RnfE family BN85302210 PF02508 Rnf-Nqr subunit, membrane protein BN85302220 PF02508 Rnf-Nqr subunit, membrane protein BN85302230 PF00175 Oxidoreductase NAD-binding domain BN85302230 PF00111 2Fe-2S iron-sulfur cluster binding domain BN85302230 PF00970 Oxidoreductase FAD-binding domain BN85302250 PF02779 Transketolase, pyrimidine binding domain BN85302250 PF00456 Transketolase, thiamine diphosphate binding domain BN85302250 PF02780 Transketolase, C-terminal domain BN85302260 PF13932 GidA associated domain BN85302260 PF01134 Glucose inhibited division protein A BN85302270 PF02527 rRNA small subunit methyltransferase G BN85302280 PF13614 AAA domain BN8530229 PF02195 ParB-like nuclease domain BN8530229 PF17762 HTH domain found in ParB protein BN85302300 PF02645 Uncharacterised protein, DegV family COG1307 BN85302310 PF01047 MarR family BN85302320 PF00480 ROK family BN85302330 PF05524 PEP-utilising enzyme, N-terminal BN85302330 PF02896 PEP-utilising enzyme, TIM barrel domain BN85302330 PF00391 PEP-utilising enzyme, mobile domain BN85302340 PF00338 Ribosomal protein S10p/S20e BN85302350 PF00297 Ribosomal protein L3 BN85302360 PF00573 Ribosomal protein L4/L1 family BN85302370 PF00276 Ribosomal protein L23 BN85302380 PF00181 Ribosomal Proteins L2, RNA binding domain BN85302380 PF03947 Ribosomal Proteins L2, C-terminal domain BN85302390 PF00203 Ribosomal protein S19 BN85302400 PF00237 Ribosomal protein L22p/L17e BN85302410 PF07650 KH domain BN85302410 PF00189 Ribosomal protein S3, C-terminal domain BN85302420 PF00252 Ribosomal protein L16p/L10e BN85302430 PF00831 Ribosomal L29 protein BN85302440 PF00366 Ribosomal protein S17 BN85302450 PF00238 Ribosomal protein L14p/L23e BN85302460 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BN85302470 PF00673 ribosomal L5P family C-terminus BN85302470 PF00281 Ribosomal protein L5 BN85302480 PF00410 Ribosomal protein S8 BN85302490 PF00347 Ribosomal protein L6 BN85302500 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BN85302510 PF00333 Ribosomal protein S5, N-terminal domain BN85302510 PF03719 Ribosomal protein S5, C-terminal domain BN85302520 PF00327 Ribosomal protein L30p/L7e BN85302530 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BN85302540 PF00344 SecY translocase BN85302550 PF05191 Adenylate kinase, active site lid BN85302560 PF00557 Metallopeptidase family M24 BN85302570 PF01176 Translation initiation factor 1A / IF-1 BN85302580 PF00416 Ribosomal protein S13/S18 BN85302590 PF00411 Ribosomal protein S11 BN85302600 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BN85302600 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BN85302600 PF01000 RNA polymerase Rpb3/RpoA insert domain BN85302610 PF01196 Ribosomal protein L17 BN85302630 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BN85302640 PF01047 MarR family BN85302650 PF07992 Pyridine nucleotide-disulphide oxidoreductase BN85302660 PF00085 Thioredoxin BN85302670 PF00005 ABC transporter BN85302680 PF00005 ABC transporter BN85302690 PF02361 Cobalt transport protein BN85302700 PF01416 tRNA pseudouridine synthase BN85302710 PF02223 Thymidylate kinase BN85302720 PF09115 DNA polymerase III, delta subunit, C terminal BN85302730 PF04468 PSP1 C-terminal conserved region BN85302740 PF05175 Methyltransferase small domain BN85302760 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BN85302770 PF09334 tRNA synthetases class I (M) BN85302770 PF01588 Putative tRNA binding domain BN85302770 PF08264 Anticodon-binding domain of tRNA BN85302780 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BN85302780 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BN85302790 PF00572 Ribosomal protein L13 BN85302800 PF00380 Ribosomal protein S9/S16 BN85302810 PF00544 Pectate lyase BN85302830 PF00528 Binding-protein-dependent transport system inner membrane component BN85302840 PF00528 Binding-protein-dependent transport system inner membrane component BN85302860 PF06917 Periplasmic pectate lyase BN85302880 PF08191 LRR adjacent BN85302880 PF00746 LPXTG cell wall anchor motif BN85302880 PF12354 Bacterial adhesion/invasion protein N terminal BN85302880 PF12799 Leucine Rich repeats (2 copies) BN85302880 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) BN85302890 PF00749 tRNA synthetases class I (E and Q), catalytic domain BN85302920 PF01406 tRNA synthetases class I (C) catalytic domain BN85302930 PF00636 Ribonuclease III domain BN85302950 PF00588 SpoU rRNA Methylase family BN85302950 PF08032 RNA 2'-O ribose methyltransferase substrate binding BN85302970 PF00471 Ribosomal protein L33 BN85302990 PF02357 Transcription termination factor nusG BN85303010 PF00298 Ribosomal protein L11, RNA binding domain BN85303010 PF03946 Ribosomal protein L11, N-terminal domain BN85303020 PF00687 Ribosomal protein L1p/L10e family BN85303030 PF00466 Ribosomal protein L10 BN85303040 PF00542 Ribosomal protein L7/L12 C-terminal domain BN85303040 PF16320 Ribosomal protein L7/L12 dimerisation domain BN85303050 PF05175 Methyltransferase small domain BN85303060 PF00562 RNA polymerase Rpb2, domain 6 BN85303060 PF04563 RNA polymerase beta subunit BN85303060 PF10385 RNA polymerase beta subunit external 1 domain BN85303060 PF04560 RNA polymerase Rpb2, domain 7 BN85303060 PF04565 RNA polymerase Rpb2, domain 3 BN85303060 PF04561 RNA polymerase Rpb2, domain 2 BN85303070 PF04998 RNA polymerase Rpb1, domain 5 BN85303070 PF05000 RNA polymerase Rpb1, domain 4 BN85303070 PF04983 RNA polymerase Rpb1, domain 3 BN85303070 PF00623 RNA polymerase Rpb1, domain 2 BN85303070 PF04997 RNA polymerase Rpb1, domain 1 BN85303080 PF00164 Ribosomal protein S12/S23 BN85303090 PF00177 Ribosomal protein S7p/S5e BN85303100 PF00679 Elongation factor G C-terminus BN85303100 PF14492 Elongation Factor G, domain II BN85303100 PF03764 Elongation factor G, domain IV BN85303100 PF00009 Elongation factor Tu GTP binding domain BN85303100 PF03144 Elongation factor Tu domain 2 BN85303110 PF03143 Elongation factor Tu C-terminal domain BN85303110 PF03144 Elongation factor Tu domain 2 BN85303110 PF00009 Elongation factor Tu GTP binding domain BN85303120 PF01026 TatD related DNase BN85303130 PF13180 PDZ domain BN85303150 PF02464 Competence-damaged protein BN85303150 PF18146 Damage-inducible protein CinA KH domain BN85303150 PF00994 Probable molybdopterin binding domain BN85303160 PF01250 Ribosomal protein S6 BN85303170 PF00436 Single-strand binding protein family BN85303180 PF01084 Ribosomal protein S18 BN85303190 PF01368 DHH family BN85303190 PF01281 Ribosomal protein L9, N-terminal domain BN85303190 PF03948 Ribosomal protein L9, C-terminal domain BN85303190 PF02272 DHHA1 domain BN85303200 PF03796 DnaB-like helicase C terminal domain BN85303200 PF00772 DnaB-like helicase N terminal domain BN85303210 PF00472 RF-1 domain BN85303210 PF03462 PCRF domain BN85303220 PF17827 PrmC N-terminal domain BN85303220 PF05175 Methyltransferase small domain BN85303230 PF01300 Telomere recombination BN85303240 PF13276 HTH-like domain BN85303240 PF00665 Integrase core domain BN85303240 PF13333 Integrase core domain BN85303250 PF01527 Transposase BN85303280 PF02502 Ribose/Galactose Isomerase BN85303310 PF09186 Domain of unknown function (DUF1949) BN85303310 PF01205 Uncharacterized protein family UPF0029 BN85303360 PF01595 Cyclin M transmembrane N-terminal domain BN85303360 PF03471 Transporter associated domain BN85303360 PF00571 CBS domain BN85303370 PF12627 Probable RNA and SrmB- binding site of polymerase A BN85303370 PF01743 Poly A polymerase head domain BN85303370 PF13735 tRNA nucleotidyltransferase domain 2 putative BN85303380 PF00128 Alpha amylase, catalytic domain BN85303380 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BN85303380 PF17999 Pullulanase N1-terminal domain BN85303390 PF01966 HD domain BN85303410 PF00753 Metallo-beta-lactamase superfamily BN85303420 PF02590 Predicted SPOUT methyltransferase BN85303440 PF01741 Large-conductance mechanosensitive channel, MscL BN85303460 PF18152 DAHP synthase ferredoxin-like domain BN85303460 PF00793 DAHP synthetase I family BN85303480 PF01761 3-dehydroquinate synthase BN85303490 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BN85303510 PF08501 Shikimate dehydrogenase substrate binding domain BN85303520 PF01264 Chorismate synthase BN85303530 PF00270 DEAD/DEAH box helicase BN85303530 PF00271 Helicase conserved C-terminal domain BN85303530 PF17191 RecG wedge domain BN85303540 PF02504 Fatty acid synthesis protein BN85303550 PF14622 Ribonuclease-III-like BN85303550 PF00035 Double-stranded RNA binding motif BN85303570 PF00730 HhH-GPD superfamily base excision DNA repair protein BN85303570 PF00633 Helix-hairpin-helix motif BN85303570 PF10576 Iron-sulfur binding domain of endonuclease III BN85303590 PF00364 Biotin-requiring enzyme BN85303600 PF02785 Biotin carboxylase C-terminal domain BN85303600 PF00289 Biotin carboxylase, N-terminal domain BN85303600 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BN85303610 PF17848 Acetyl-coA carboxylase zinc finger domain BN85303610 PF01039 Carboxyl transferase domain BN85303620 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BN85303630 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BN85303630 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BN85303640 PF03060 Nitronate monooxygenase BN85303650 PF00698 Acyl transferase domain BN85303670 PF00109 Beta-ketoacyl synthase, N-terminal domain BN85303670 PF02801 Beta-ketoacyl synthase, C-terminal domain BN85303680 PF07977 FabA-like domain BN85303690 PF02237 Biotin protein ligase C terminal domain BN85303690 PF03099 Biotin/lipoate A/B protein ligase family BN85303690 PF08279 HTH domain BN85303700 PF02632 BioY family BN85303710 PF03060 Nitronate monooxygenase BN85303740 PF01012 Electron transfer flavoprotein domain BN85303750 PF00766 Electron transfer flavoprotein FAD-binding domain BN85303750 PF01012 Electron transfer flavoprotein domain BN85303760 PF01565 FAD binding domain BN85303760 PF02913 FAD linked oxidases, C-terminal domain BN85303770 PF01418 Helix-turn-helix domain, rpiR family BN85303770 PF01380 SIS domain BN85303780 PF03702 Anhydro-N-acetylmuramic acid kinase BN85303800 PF02638 Glycosyl hydrolase-like 10 BN85303820 PF00144 Beta-lactamase BN85303830 PF01471 Putative peptidoglycan binding domain BN85303830 PF01476 LysM domain BN85303830 PF01510 N-acetylmuramoyl-L-alanine amidase BN85303860 PF01547 Bacterial extracellular solute-binding protein BN85303870 PF00528 Binding-protein-dependent transport system inner membrane component BN85303880 PF00528 Binding-protein-dependent transport system inner membrane component BN85303930 PF00528 Binding-protein-dependent transport system inner membrane component BN85303950 PF07075 Protein of unknown function (DUF1343) BN85303960 PF00933 Glycosyl hydrolase family 3 N terminal domain BN85303960 PF01915 Glycosyl hydrolase family 3 C-terminal domain BN85303970 PF01869 BadF/BadG/BcrA/BcrD ATPase family BN85303980 PF01380 SIS domain BN85303990 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BN85304000 PF01979 Amidohydrolase family BN85304030 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BN85304040 PF01979 Amidohydrolase family BN85304050 PF00480 ROK family BN85304140 PF00528 Binding-protein-dependent transport system inner membrane component BN85304150 PF00528 Binding-protein-dependent transport system inner membrane component BN85304190 PF00528 Binding-protein-dependent transport system inner membrane component BN85304200 PF00528 Binding-protein-dependent transport system inner membrane component BN85304310 PF00989 PAS fold BN85304310 PF16736 Single Cache-like BN85304310 PF00512 His Kinase A (phospho-acceptor) domain BN85304310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BN85304320 PF00072 Response regulator receiver domain BN85304320 PF00486 Transcriptional regulatory protein, C terminal BN85304330 PF00005 ABC transporter BN85304330 PF02687 FtsX-like permease family BN85304330 PF12704 MacB-like periplasmic core domain BN85304340 PF03009 Glycerophosphoryl diester phosphodiesterase family BN85304350 PF17785 PUA-like domain BN85304350 PF10672 S-adenosylmethionine-dependent methyltransferase BN85304410 PF00550 Phosphopantetheine attachment site BN85304420 PF09334 tRNA synthetases class I (M) BN85304420 PF13603 Leucyl-tRNA synthetase, Domain 2 BN85304420 PF08264 Anticodon-binding domain of tRNA BN85304470 PF01758 Sodium Bile acid symporter family BN85304480 PF00563 EAL domain BN85304480 PF00990 Diguanylate cyclase, GGDEF domain BN85304480 PF03707 Bacterial signalling protein N terminal repeat BN85304490 PF02073 Thermophilic metalloprotease (M29) BN85304520 PF00528 Binding-protein-dependent transport system inner membrane component BN85304530 PF00528 Binding-protein-dependent transport system inner membrane component BN85304540 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain BN85304540 PF06165 Glycosyltransferase family 36 BN85304590 PF00528 Binding-protein-dependent transport system inner membrane component BN85304600 PF00528 Binding-protein-dependent transport system inner membrane component BN85304630 PF00528 Binding-protein-dependent transport system inner membrane component BN85304640 PF00528 Binding-protein-dependent transport system inner membrane component BN85304680 PF00128 Alpha amylase, catalytic domain BN85304680 PF16657 Maltogenic Amylase, C-terminal domain BN85304690 PF00356 Bacterial regulatory proteins, lacI family BN85304700 PF01915 Glycosyl hydrolase family 3 C-terminal domain BN85304700 PF00933 Glycosyl hydrolase family 3 N terminal domain BN85304700 PF14310 Fibronectin type III-like domain BN85304710 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain BN85304720 PF01938 TRAM domain BN85304720 PF05958 tRNA (Uracil-5-)-methyltransferase BN85304750 PF00403 Heavy-metal-associated domain BN85304760 PF01790 Prolipoprotein diacylglyceryl transferase BN85304820 PF00486 Transcriptional regulatory protein, C terminal BN85304820 PF00072 Response regulator receiver domain BN85304830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BN85304830 PF00512 His Kinase A (phospho-acceptor) domain BN85304880 PF01022 Bacterial regulatory protein, arsR family BN85304890 PF00403 Heavy-metal-associated domain BN85304900 PF00403 Heavy-metal-associated domain BN85304950 PF02661 Fic/DOC family BN85304950 PF13784 Fic/DOC family N-terminal BN85305000 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BN85305050 PF00293 NUDIX domain BN85305050 PF13344 Haloacid dehalogenase-like hydrolase BN85305090 PF06962 Putative rRNA methylase BN85305100 PF04055 Radical SAM superfamily BN85305100 PF16199 Radical_SAM C-terminal domain BN85305120 PF00929 Exonuclease BN85305120 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BN85305120 PF07733 Bacterial DNA polymerase III alpha NTPase domain BN85305120 PF14579 Helix-hairpin-helix motif BN85305120 PF02811 PHP domain BN85305120 PF11490 DNA polymerase III polC-type N-terminus II BN85305120 PF14480 DNA polymerase III polC-type N-terminus I BN85305150 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BN85305150 PF01409 tRNA synthetases class II core domain (F) BN85305160 PF03483 B3/4 domain BN85305160 PF03484 tRNA synthetase B5 domain BN85305160 PF03147 Ferredoxin-fold anticodon binding domain BN85305160 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BN85305160 PF01588 Putative tRNA binding domain BN85305170 PF04055 Radical SAM superfamily BN85305180 PF03193 RsgA GTPase BN85305190 PF00834 Ribulose-phosphate 3 epimerase family BN85305210 PF00830 Ribosomal L28 family BN8530522 PF13684 Dihydroxyacetone kinase family BN8530522 PF02734 DAK2 domain BN85305250 PF02384 N-6 DNA Methylase BN85305360 PF13086 AAA domain BN85305360 PF13087 AAA domain BN85305360 PF13195 Protein of unknown function (DUF4011) BN85305390 PF17871 AAA lid domain BN85305390 PF00004 ATPase family associated with various cellular activities (AAA) BN85305390 PF07724 AAA domain (Cdc48 subfamily) BN85305390 PF02861 Clp amino terminal domain, pathogenicity island component BN85305390 PF10431 C-terminal, D2-small domain, of ClpB protein BN85305470 PF00288 GHMP kinases N terminal domain BN85305470 PF08544 GHMP kinases C terminal BN85305470 PF10509 Galactokinase galactose-binding signature BN85305490 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain BN85305490 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain BN85305510 PF04167 Protein of unknown function (DUF402) BN85305520 PF06081 Aromatic acid exporter family member 1 BN85305520 PF11728 Putative aromatic acid exporter C-terminal domain BN85305550 PF12704 MacB-like periplasmic core domain BN85305550 PF02687 FtsX-like permease family BN85305560 PF00005 ABC transporter BN85305590 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BN85305590 PF01276 Orn/Lys/Arg decarboxylase, major domain BN85305600 PF00491 Arginase family BN8530561 PF04231 Endonuclease I BN85305620 PF00664 ABC transporter transmembrane region BN85305620 PF00005 ABC transporter BN85305630 PF00005 ABC transporter BN85305630 PF00664 ABC transporter transmembrane region BN85305650 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BN85305660 PF00313 'Cold-shock' DNA-binding domain BN85305680 PF00528 Binding-protein-dependent transport system inner membrane component BN85305690 PF00005 ABC transporter BN85305700 PF02661 Fic/DOC family BN85305700 PF05860 haemagglutination activity domain BN85305700 PF13332 Hemagglutinin repeat BN85305700 PF13018 Extended Signal Peptide of Type V secretion system BN85305700 PF03543 Yersinia/Haemophilus virulence surface antigen BN85305710 PF12832 MFS_1 like family BN85305730 PF09180 Prolyl-tRNA synthetase, C-terminal BN85305730 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BN85305730 PF03129 Anticodon binding domain BN85305760 PF01496 V-type ATPase 116kDa subunit family BN85305800 PF02874 ATP synthase alpha/beta family, beta-barrel domain BN85305800 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BN85305800 PF16886 ATPsynthase alpha/beta subunit N-term extension BN85305810 PF02874 ATP synthase alpha/beta family, beta-barrel domain BN85305810 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BN85305820 PF01813 ATP synthase subunit D BN85305830 PF00689 Cation transporting ATPase, C-terminus BN85305830 PF00690 Cation transporter/ATPase, N-terminus BN85305840 PF03144 Elongation factor Tu domain 2 BN85305840 PF00009 Elongation factor Tu GTP binding domain BN85305840 PF03764 Elongation factor G, domain IV BN85305840 PF14492 Elongation Factor G, domain II BN85305840 PF00679 Elongation factor G C-terminus BN85305870 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BN85305870 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus BN85305890 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BN85305890 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BN85305900 PF02386 Cation transport protein BN85305920 PF00625 Guanylate kinase BN85305930 PF01192 RNA polymerase Rpb6 BN85305940 PF01541 GIY-YIG catalytic domain BN85305940 PF08459 UvrC Helix-hairpin-helix N-terminal BN85305940 PF02151 UvrB/uvrC motif BN85305970 PF00753 Metallo-beta-lactamase superfamily BN85305970 PF17770 Ribonuclease J C-terminal domain BN85305970 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BN85305980 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BN85305990 PF01467 Cytidylyltransferase-like BN85306020 PF00950 ABC 3 transport family BN85306030 PF00005 ABC transporter BN85306050 PF17384 RimP C-terminal SH3 domain BN85306050 PF02576 RimP N-terminal domain BN85306060 PF08529 NusA N-terminal domain BN85306060 PF13184 NusA-like KH domain BN85306070 PF04296 Protein of unknown function (DUF448) BN85306080 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family BN85306090 PF00009 Elongation factor Tu GTP binding domain BN85306090 PF04760 Translation initiation factor IF-2, N-terminal region BN85306090 PF11987 Translation-initiation factor 2 BN85306100 PF02033 Ribosome-binding factor A BN85306130 PF01145 SPFH domain / Band 7 family BN85306140 PF17764 3′ DNA-binding domain (3′BD) BN85306140 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BN85306140 PF18074 Primosomal protein N C-terminal domain BN85306140 PF04851 Type III restriction enzyme, res subunit BN85306140 PF00271 Helicase conserved C-terminal domain BN85306150 PF02911 Formyl transferase, C-terminal domain BN85306150 PF00551 Formyl transferase BN85306160 PF04608 Phosphatidylglycerophosphatase A BN85306180 PF02772 S-adenosylmethionine synthetase, central domain BN85306180 PF00438 S-adenosylmethionine synthetase, N-terminal domain BN85306180 PF02773 S-adenosylmethionine synthetase, C-terminal domain BN85306200 PF04011 LemA family BN85306210 PF01043 SecA preprotein cross-linking domain BN85306210 PF07517 SecA DEAD-like domain BN85306210 PF02810 SEC-C motif BN85306210 PF07516 SecA Wing and Scaffold domain BN85306220 PF00472 RF-1 domain BN85306220 PF03462 PCRF domain BN85306230 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BN85306240 PF01471 Putative peptidoglycan binding domain BN85306240 PF13180 PDZ domain BN85306240 PF03572 Peptidase family S41 BN85306250 PF02631 RecX family BN85306260 PF00128 Alpha amylase, catalytic domain BN85306260 PF02806 Alpha amylase, C-terminal all-beta domain BN85306260 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BN85306270 PF00343 Carbohydrate phosphorylase BN85306300 PF17854 FtsK alpha domain BN85306300 PF09397 Ftsk gamma domain BN85306300 PF01580 FtsK/SpoIIIE family BN85306310 PF10502 Signal peptidase, peptidase S26 BN85306320 PF01926 50S ribosome-binding GTPase BN85306330 PF01351 Ribonuclease HII BN85306350 PF01396 Topoisomerase DNA binding C4 zinc finger BN85306350 PF01751 Toprim domain BN85306350 PF01131 DNA topoisomerase BN85306360 PF08534 Redoxin BN85306370 PF02881 SRP54-type protein, helical bundle domain BN85306370 PF00448 SRP54-type protein, GTPase domain BN85306380 PF04297 Putative helix-turn-helix protein, YlxM / p13 like BN85306390 PF00448 SRP54-type protein, GTPase domain BN85306390 PF02881 SRP54-type protein, helical bundle domain BN85306390 PF02978 Signal peptide binding domain BN85306400 PF00476 DNA polymerase family A BN85306400 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BN85306400 PF01367 5'-3' exonuclease, C-terminal SAM fold BN85306410 PF06827 Zinc finger found in FPG and IleRS BN85306410 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BN85306410 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BN85306420 PF01121 Dephospho-CoA kinase BN85306450 PF07319 Primosomal protein DnaI N-terminus BN85306450 PF01695 IstB-like ATP binding protein BN85306460 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BN85306460 PF02824 TGS domain BN85306460 PF03129 Anticodon binding domain BN85306460 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BN85306470 PF00005 ABC transporter BN85306470 PF13732 Domain of unknown function (DUF4162) BN85306490 PF10609 NUBPL iron-transfer P-loop NTPase BN85306500 PF00486 Transcriptional regulatory protein, C terminal BN85306500 PF00072 Response regulator receiver domain BN85306510 PF00989 PAS fold BN85306510 PF00512 His Kinase A (phospho-acceptor) domain BN85306510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BN85306510 PF16736 Single Cache-like BN85306520 PF13026 Protein of unknown function (DUF3887) BN85306520 PF12146 Serine aminopeptidase, S33 BN85306540 PF01575 MaoC like domain BN85306550 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BN85306550 PF02770 Acyl-CoA dehydrogenase, middle domain BN85306550 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BN85306560 PF01012 Electron transfer flavoprotein domain BN85306570 PF01012 Electron transfer flavoprotein domain BN85306570 PF00766 Electron transfer flavoprotein FAD-binding domain BN85306600 PF02535 ZIP Zinc transporter BN85306610 PF07556 Protein of unknown function (DUF1538) BN85306720 PF00005 ABC transporter BN85306720 PF00664 ABC transporter transmembrane region BN85306730 PF00005 ABC transporter BN85306730 PF00664 ABC transporter transmembrane region BN85306790 PF13419 Haloacid dehalogenase-like hydrolase BN85306800 PF13333 Integrase core domain BN85306800 PF13276 HTH-like domain BN85306800 PF00665 Integrase core domain BN85306810 PF01527 Transposase BN85306820 PF00128 Alpha amylase, catalytic domain BN85306820 PF16657 Maltogenic Amylase, C-terminal domain BN85306820 PF02903 Alpha amylase, N-terminal ig-like domain BN85306830 PF00128 Alpha amylase, catalytic domain BN85306850 PF00128 Alpha amylase, catalytic domain BN85306850 PF03714 Bacterial pullanase-associated domain BN85306850 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BN85306880 PF00528 Binding-protein-dependent transport system inner membrane component BN85306890 PF00528 Binding-protein-dependent transport system inner membrane component BN85306950 PF12848 ABC transporter BN85306950 PF00005 ABC transporter BN85306960 PF01554 MatE BN85306970 PF01425 Amidase BN85306980 PF02608 ABC transporter substrate-binding protein PnrA-like BN85307020 PF04551 GcpE protein BN85307030 PF00471 Ribosomal protein L33 BN85307040 PF00753 Metallo-beta-lactamase superfamily BN85307050 PF01628 HrcA protein C terminal domain BN85307060 PF01025 GrpE BN85307070 PF00012 Hsp70 protein BN85307080 PF01556 DnaJ C terminal domain BN85307080 PF00226 DnaJ domain BN85307080 PF00684 DnaJ central domain BN85307090 PF04452 RNA methyltransferase BN85307100 PF01165 Ribosomal protein S21 BN85307110 PF02562 PhoH-like protein BN85307120 PF02130 Uncharacterized protein family UPF0054 BN85307130 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BN85307140 PF07650 KH domain BN85307140 PF01926 50S ribosome-binding GTPase BN85307150 PF11967 Recombination protein O N terminal BN85307150 PF02565 Recombination protein O C terminal BN85307160 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BN85307160 PF03129 Anticodon binding domain BN85307170 PF01807 CHC2 zinc finger BN85307170 PF08275 DNA primase catalytic core, N-terminal domain BN85307170 PF10410 DnaB-helicase binding domain of primase BN85307180 PF03979 Sigma-70 factor, region 1.1 BN85307180 PF04539 Sigma-70 region 3 BN85307180 PF04545 Sigma-70, region 4 BN85307180 PF00140 Sigma-70 factor, region 1.2 BN85307180 PF04542 Sigma-70 region 2 BN85307190 PF03979 Sigma-70 factor, region 1.1 BN85307190 PF04539 Sigma-70 region 3 BN85307190 PF04545 Sigma-70, region 4 BN85307190 PF00140 Sigma-70 factor, region 1.2 BN85307190 PF04542 Sigma-70 region 2 BN85307200 PF04816 tRNA (adenine(22)-N(1))-methyltransferase BN85307230 PF02899 Phage integrase, N-terminal SAM-like domain BN85307230 PF00589 Phage integrase family BN85307290 PF13180 PDZ domain BN85307370 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) BN85307370 PF08463 EcoEI R protein C-terminal BN85307370 PF00271 Helicase conserved C-terminal domain BN85307370 PF04851 Type III restriction enzyme, res subunit BN85307380 PF12161 HsdM N-terminal domain BN85307380 PF02384 N-6 DNA Methylase BN85307430 PF00011 Hsp20/alpha crystallin family BN8530745 PF08274 PhnA Zinc-Ribbon BN8530745 PF03831 PhnA domain BN85307460 PF03051 Peptidase C1-like family BN85307500 PF00119 ATP synthase A chain BN85307510 PF00137 ATP synthase subunit C BN85307540 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BN85307540 PF00306 ATP synthase alpha/beta chain, C terminal domain BN85307540 PF02874 ATP synthase alpha/beta family, beta-barrel domain BN85307550 PF00231 ATP synthase BN85307560 PF02874 ATP synthase alpha/beta family, beta-barrel domain BN85307560 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BN85307570 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BN85307580 PF00881 Nitroreductase family BN85307600 PF00730 HhH-GPD superfamily base excision DNA repair protein BN85307600 PF14815 NUDIX domain BN85307630 PF01702 Queuine tRNA-ribosyltransferase BN85307640 PF12327 FtsZ family, C-terminal domain BN85307640 PF00091 Tubulin/FtsZ family, GTPase domain BN85307650 PF06071 Protein of unknown function (DUF933) BN85307650 PF01926 50S ribosome-binding GTPase BN85307660 PF01168 Alanine racemase, N-terminal domain BN85307670 PF04472 Cell division protein SepF BN85307690 PF06827 Zinc finger found in FPG and IleRS BN85307690 PF08264 Anticodon-binding domain of tRNA BN85307690 PF00133 tRNA synthetases class I (I, L, M and V) BN85307700 PF01975 Survival protein SurE BN85307730 PF01791 DeoC/LacD family aldolase BN85307740 PF01048 Phosphorylase superfamily BN85307750 PF05193 Peptidase M16 inactive domain BN85307760 PF00675 Insulinase (Peptidase family M16) BN85307760 PF05193 Peptidase M16 inactive domain BN85307770 PF00436 Single-strand binding protein family BN85307780 PF01546 Peptidase family M20/M25/M40 BN85307790 PF00303 Thymidylate synthase BN85307800 PF00186 Dihydrofolate reductase BN85307820 PF00300 Histidine phosphatase superfamily (branch 1) BN85307830 PF02885 Glycosyl transferase family, helical bundle domain BN85307830 PF00591 Glycosyl transferase family, a/b domain BN85307830 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain BN85307850 PF09515 Thiamine transporter protein (Thia_YuaJ) BN85307860 PF03838 Recombination protein U BN85307870 PF17770 Ribonuclease J C-terminal domain BN85307870 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BN85307870 PF00753 Metallo-beta-lactamase superfamily BN85307910 PF00722 Glycosyl hydrolases family 16 BN85307920 PF00356 Bacterial regulatory proteins, lacI family BN85307970 PF00528 Binding-protein-dependent transport system inner membrane component BN85307980 PF00528 Binding-protein-dependent transport system inner membrane component BN85308010 PF00528 Binding-protein-dependent transport system inner membrane component BN85308020 PF00528 Binding-protein-dependent transport system inner membrane component BN85308030 PF00722 Glycosyl hydrolases family 16 BN85308040 PF13333 Integrase core domain BN85308040 PF00665 Integrase core domain BN85308040 PF13276 HTH-like domain BN85308050 PF01527 Transposase BN85308060 PF12002 MgsA AAA+ ATPase C terminal BN85308060 PF05496 Holliday junction DNA helicase RuvB P-loop domain BN85308060 PF16193 AAA C-terminal domain BN85308080 PF00156 Phosphoribosyl transferase domain BN85308090 PF13291 ACT domain BN85308090 PF04607 Region found in RelA / SpoT proteins BN85308090 PF02824 TGS domain BN85308100 PF02580 D-Tyr-tRNA(Tyr) deacylase BN85308130 PF03129 Anticodon binding domain BN85308130 PF13393 Histidyl-tRNA synthetase BN85308140 PF00152 tRNA synthetases class II (D, K and N) BN85308140 PF01336 OB-fold nucleic acid binding domain BN85308140 PF02938 GAD domain BN85308150 PF01625 Peptide methionine sulfoxide reductase BN85308170 PF05362 Lon protease (S16) C-terminal proteolytic domain BN85308170 PF13180 PDZ domain BN85308190 PF01252 Signal peptidase (SPase) II BN85308200 PF00849 RNA pseudouridylate synthase BN85308200 PF01479 S4 domain BN85308210 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BN85308210 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BN85308280 PF07499 RuvA, C-terminal domain BN85308280 PF01330 RuvA N terminal domain BN85308290 PF17864 RuvB AAA lid domain BN85308290 PF05491 RuvB C-terminal winged helix domain BN85308290 PF05496 Holliday junction DNA helicase RuvB P-loop domain BN85308300 PF02547 Queuosine biosynthesis protein BN85308310 PF02673 Bacitracin resistance protein BacA BN85308330 PF00381 PTS HPr component phosphorylation site BN85308350 PF02390 Putative methyltransferase BN85308360 PF05343 M42 glutamyl aminopeptidase BN85308370 PF00248 Aldo/keto reductase family BN85308380 PF01232 Mannitol dehydrogenase Rossmann domain BN85308380 PF08125 Mannitol dehydrogenase C-terminal domain BN85308390 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus BN85308390 PF08666 SAF domain BN85308400 PF02614 Glucuronate isomerase BN85308410 PF01095 Pectinesterase BN85308430 PF00528 Binding-protein-dependent transport system inner membrane component BN85308440 PF00528 Binding-protein-dependent transport system inner membrane component BN85308480 PF03459 TOBE domain BN85308480 PF17912 MalK OB fold domain BN85308480 PF00005 ABC transporter BN85308510 PF00295 Glycosyl hydrolases family 28 BN85308520 PF01081 KDPG and KHG aldolase BN85308550 PF00294 pfkB family carbohydrate kinase BN85308580 PF04962 KduI/IolB family BN85308600 PF12822 ECF transporter, substrate-specific component BN85308610 PF03309 Type III pantothenate kinase BN85308620 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BN85308620 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BN85308620 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BN85308620 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BN85308630 PF00557 Metallopeptidase family M24 BN85308630 PF05195 Aminopeptidase P, N-terminal domain BN85308660 PF00005 ABC transporter BN85308680 PF05198 Translation initiation factor IF-3, N-terminal domain BN85308680 PF00707 Translation initiation factor IF-3, C-terminal domain BN85308690 PF01632 Ribosomal protein L35 BN85308700 PF00453 Ribosomal protein L20 BN85308720 PF00483 Nucleotidyl transferase BN85308730 PF00270 DEAD/DEAH box helicase BN85308730 PF00271 Helicase conserved C-terminal domain BN85308770 PF00037 4Fe-4S binding domain BN85308780 PF03672 Uncharacterised protein family (UPF0154) BN85308800 PF02660 Glycerol-3-phosphate acyltransferase BN85308810 PF00204 DNA gyrase B BN85308810 PF00986 DNA gyrase B subunit, carboxyl terminus BN85308810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BN85308810 PF01751 Toprim domain BN85308820 PF03989 DNA gyrase C-terminal domain, beta-propeller BN85308820 PF00521 DNA gyrase/topoisomerase IV, subunit A BN85308830 PF02824 TGS domain BN85308830 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BN85308830 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BN85308830 PF03129 Anticodon binding domain BN85308850 PF17763 Glutaminase/Asparaginase C-terminal domain BN85308850 PF00710 Asparaginase, N-terminal BN85308870 PF01676 Metalloenzyme superfamily BN85308880 PF00589 Phage integrase family BN85308880 PF02899 Phage integrase, N-terminal SAM-like domain BN85308890 PF04055 Radical SAM superfamily BN85308890 PF06969 HemN C-terminal domain BN85308900 PF00248 Aldo/keto reductase family BN85308910 PF00009 Elongation factor Tu GTP binding domain BN85308910 PF00679 Elongation factor G C-terminus BN85308910 PF06421 GTP-binding protein LepA C-terminus BN85308910 PF03144 Elongation factor Tu domain 2 BN85308940 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BN85308940 PF00575 S1 RNA binding domain BN85308940 PF03725 3' exoribonuclease family, domain 2 BN85308940 PF01138 3' exoribonuclease family, domain 1 BN85308950 PF00312 Ribosomal protein S15 BN85308960 PF06153 Cyclic-di-AMP receptor BN85308970 PF06574 FAD synthetase BN85308970 PF01687 Riboflavin kinase BN85308980 PF01509 TruB family pseudouridylate synthase (N terminal domain) BN85308990 PF13673 Acetyltransferase (GNAT) domain BN85309000 PF00085 Thioredoxin BN85309010 PF01713 Smr domain BN85309010 PF00488 MutS domain V BN85309020 PF01713 Smr domain BN85309020 PF00488 MutS domain V BN85309030 PF11858 Domain of unknown function (DUF3378) BN85309030 PF01351 Ribonuclease HII BN85309040 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BN85309040 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BN85309050 PF00561 alpha/beta hydrolase fold BN85309060 PF01018 GTP1/OBG BN85309060 PF09269 Domain of unknown function (DUF1967) BN85309060 PF01926 50S ribosome-binding GTPase BN85309070 PF01016 Ribosomal L27 protein BN85309090 PF00829 Ribosomal prokaryotic L21 protein BN85309110 PF04002 RadC-like JAB domain BN85309120 PF02875 Mur ligase family, glutamate ligase domain BN85309120 PF08245 Mur ligase middle domain BN85309130 PF10458 Valyl tRNA synthetase tRNA binding arm BN85309130 PF00133 tRNA synthetases class I (I, L, M and V) BN85309130 PF08264 Anticodon-binding domain of tRNA BN85309150 PF02645 Uncharacterised protein, DegV family COG1307 BN85309160 PF01926 50S ribosome-binding GTPase BN85309170 PF00004 ATPase family associated with various cellular activities (AAA) BN85309170 PF05362 Lon protease (S16) C-terminal proteolytic domain BN85309170 PF02190 ATP-dependent protease La (LON) substrate-binding domain BN85309180 PF05698 Bacterial trigger factor protein (TF) C-terminus BN85309180 PF05697 Bacterial trigger factor protein (TF) BN85309180 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BN85309200 PF00403 Heavy-metal-associated domain BN85309220 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BN85309230 PF04607 Region found in RelA / SpoT proteins BN85309240 PF00561 alpha/beta hydrolase fold BN85309240 PF08386 TAP-like protein BN85309250 PF00561 alpha/beta hydrolase fold BN85309260 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain BN85309260 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain BN85309280 PF00005 ABC transporter BN85309290 PF00005 ABC transporter BN85309290 PF12399 Branched-chain amino acid ATP-binding cassette transporter BN85309310 PF02653 Branched-chain amino acid transport system / permease component BN85309320 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BN85309320 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BN85309340 PF00108 Thiolase, N-terminal domain BN85309340 PF02803 Thiolase, C-terminal domain BN85309360 PF01641 SelR domain BN85309500 PF00498 FHA domain BN85309500 PF00563 EAL domain BN85309500 PF00990 Diguanylate cyclase, GGDEF domain BN85309510 PF00563 EAL domain BN85309510 PF00498 FHA domain BN85309510 PF00990 Diguanylate cyclase, GGDEF domain BN85309520 PF01915 Glycosyl hydrolase family 3 C-terminal domain BN85309520 PF00933 Glycosyl hydrolase family 3 N terminal domain BN85309520 PF14310 Fibronectin type III-like domain BN85309530 PF00990 Diguanylate cyclase, GGDEF domain BN85309540 PF01184 GPR1/FUN34/yaaH family BN85309560 PF00005 ABC transporter BN85309570 PF00528 Binding-protein-dependent transport system inner membrane component BN85309580 PF00497 Bacterial extracellular solute-binding proteins, family 3 BN85309600 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BN85309600 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BN85309610 PF00563 EAL domain BN85309610 PF13426 PAS domain BN85309610 PF00990 Diguanylate cyclase, GGDEF domain BN85309620 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BN85309620 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BN85309630 PF03180 NLPA lipoprotein BN85309640 PF00528 Binding-protein-dependent transport system inner membrane component BN85309650 PF09383 NIL domain BN85309650 PF00005 ABC transporter BN85309660 PF09383 NIL domain BN85309660 PF00005 ABC transporter BN85309680 PF07992 Pyridine nucleotide-disulphide oxidoreductase BN85309680 PF13192 Thioredoxin domain BN85309690 PF13192 Thioredoxin domain BN85309690 PF07992 Pyridine nucleotide-disulphide oxidoreductase BN85309720 PF04608 Phosphatidylglycerophosphatase A BN85309750 PF05958 tRNA (Uracil-5-)-methyltransferase BN85309750 PF01938 TRAM domain BN85309760 PF00871 Acetokinase family BN85309770 PF03006 Haemolysin-III related BN85309780 PF00588 SpoU rRNA Methylase family BN85309790 PF08331 Domain of unknown function (DUF1730) BN85309810 PF07470 Glycosyl Hydrolase Family 88 BN85309820 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BN85309820 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain BN85309820 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BN85309840 PF03883 Peroxide stress protein YaaA BN85309850 PF13396 Phospholipase_D-nuclease N-terminal BN85309850 PF13091 PLD-like domain BN85309940 PF01725 Ham1 family BN85309950 PF02080 TrkA-C domain BN85309950 PF02254 TrkA-N domain BN85309960 PF02517 CPBP intramembrane metalloprotease BN85309980 PF00216 Bacterial DNA-binding protein BN85309990 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BN85309990 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BN85310000 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BN85310000 PF01926 50S ribosome-binding GTPase BN85310010 PF02224 Cytidylate kinase BN85310020 PF01479 S4 domain BN85310020 PF00849 RNA pseudouridylate synthase BN85310030 PF01132 Elongation factor P (EF-P) OB domain BN85310030 PF08207 Elongation factor P (EF-P) KOW-like domain BN85310030 PF09285 Elongation factor P, C-terminal BN85310040 PF01220 Dehydroquinase class II BN85310070 PF08676 MutL C terminal dimerisation domain BN85310070 PF01119 DNA mismatch repair protein, C-terminal domain BN85310080 PF05190 MutS family domain IV BN85310080 PF05192 MutS domain III BN85310080 PF05188 MutS domain II BN85310080 PF01624 MutS domain I BN85310080 PF00488 MutS domain V BN85310110 PF01938 TRAM domain BN85310110 PF00919 Uncharacterized protein family UPF0004 BN85310110 PF04055 Radical SAM superfamily BN85310120 PF13277 YmdB-like protein BN85310130 PF01966 HD domain BN85310130 PF00013 KH domain BN85310130 PF12072 Domain of unknown function (DUF3552) BN85310150 PF00154 recA bacterial DNA recombination protein BN85310160 PF01066 CDP-alcohol phosphatidyltransferase BN85310170 PF01649 Ribosomal protein S20 BN85310180 PF14480 DNA polymerase III polC-type N-terminus I BN85310180 PF14579 Helix-hairpin-helix motif BN85310180 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BN85310180 PF11490 DNA polymerase III polC-type N-terminus II BN85310180 PF02811 PHP domain BN85310180 PF07733 Bacterial DNA polymerase III alpha NTPase domain BN85310180 PF00929 Exonuclease BN85310180 PF01336 OB-fold nucleic acid binding domain BN85310190 PF06144 DNA polymerase III, delta subunit BN85310200 PF03772 Competence protein BN85310200 PF00753 Metallo-beta-lactamase superfamily BN85310250 PF07664 Ferrous iron transport protein B C terminus BN85310250 PF02421 Ferrous iron transport protein B BN85310250 PF07670 Nucleoside recognition BN85310270 PF03449 Transcription elongation factor, N-terminal BN85310270 PF01272 Transcription elongation factor, GreA/GreB, C-term BN85310300 PF01136 Peptidase family U32 BN85310300 PF12392 Collagenase BN85310320 PF06949 Protein of unknown function (DUF1292) BN85310330 PF03652 Holliday junction resolvase BN85310340 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BN85310340 PF01411 tRNA synthetases class II (A) BN85310340 PF02272 DHHA1 domain BN85310360 PF01734 Patatin-like phospholipase BN85310370 PF01668 SmpB protein BN85310380 PF00773 RNB domain BN85310380 PF17876 Cold shock domain BN85310380 PF00575 S1 RNA binding domain BN85310380 PF08206 Ribonuclease B OB domain BN85310390 PF03952 Enolase, N-terminal domain BN85310390 PF00113 Enolase, C-terminal TIM barrel domain BN85310400 PF01569 PAP2 superfamily BN85310440 PF01676 Metalloenzyme superfamily BN85310440 PF06415 BPG-independent PGAM N-terminus (iPGM_N) BN85310450 PF00005 ABC transporter BN85310500 PF00171 Aldehyde dehydrogenase family BN85310500 PF00465 Iron-containing alcohol dehydrogenase BN85310520 PF11798 IMS family HHH motif BN85310520 PF11799 impB/mucB/samB family C-terminal domain BN85310520 PF00817 impB/mucB/samB family BN85310560 PF01047 MarR family BN85310570 PF00255 Glutathione peroxidase BN85310580 PF01527 Transposase BN85310590 PF13333 Integrase core domain BN85310590 PF13276 HTH-like domain BN85310590 PF00665 Integrase core domain BN85310680 PF07992 Pyridine nucleotide-disulphide oxidoreductase BN85310680 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BN85310690 PF00625 Guanylate kinase BN85310740 PF04227 Indigoidine synthase A like protein BN85310750 PF00294 pfkB family carbohydrate kinase BN85310780 PF02661 Fic/DOC family BN85310780 PF13784 Fic/DOC family N-terminal BN85310800 PF01022 Bacterial regulatory protein, arsR family BN85310850 PF00571 CBS domain BN85310850 PF01595 Cyclin M transmembrane N-terminal domain BN85310850 PF03471 Transporter associated domain BN85310890 PF01872 RibD C-terminal domain BN85310950 PF01381 Helix-turn-helix BN85311020 PF00005 ABC transporter BN85311040 PF00534 Glycosyl transferases group 1 BN85311040 PF13439 Glycosyltransferase Family 4 BN85311060 PF03485 Arginyl tRNA synthetase N terminal domain BN85311060 PF05746 DALR anticodon binding domain BN85311060 PF00750 tRNA synthetases class I (R) BN85311090 PF00534 Glycosyl transferases group 1 BN85311090 PF08323 Starch synthase catalytic domain BN85311100 PF00132 Bacterial transferase hexapeptide (six repeats) BN85311100 PF00483 Nucleotidyl transferase BN85311110 PF02645 Uncharacterised protein, DegV family COG1307 BN85311120 PF01261 Xylose isomerase-like TIM barrel BN85311130 PF00271 Helicase conserved C-terminal domain BN85311130 PF00270 DEAD/DEAH box helicase BN85311140 PF02401 LytB protein BN85311150 PF00005 ABC transporter BN85311160 PF00005 ABC transporter BN85311160 PF02687 FtsX-like permease family BN85311160 PF12704 MacB-like periplasmic core domain BN85311170 PF11798 IMS family HHH motif BN85311170 PF11799 impB/mucB/samB family C-terminal domain BN85311170 PF00817 impB/mucB/samB family BN85311180 PF13476 AAA domain BN85311190 PF01728 FtsJ-like methyltransferase BN85311190 PF01479 S4 domain BN85311200 PF02780 Transketolase, C-terminal domain BN85311200 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BN85311200 PF02779 Transketolase, pyrimidine binding domain BN85311220 PF13742 OB-fold nucleic acid binding domain BN85311220 PF02601 Exonuclease VII, large subunit BN85311230 PF01029 NusB family BN85311240 PF13416 Bacterial extracellular solute-binding protein BN85311250 PF00528 Binding-protein-dependent transport system inner membrane component BN85311260 PF00528 Binding-protein-dependent transport system inner membrane component BN85311270 PF00005 ABC transporter BN85311270 PF08402 TOBE domain BN85311300 PF03009 Glycerophosphoryl diester phosphodiesterase family BN85311310 PF01244 Membrane dipeptidase (Peptidase family M19) BN85311320 PF01795 MraW methylase family BN85311360 PF12450 von Willebrand factor BN85311360 PF00092 von Willebrand factor type A domain BN85311360 PF12034 Domain of unknown function (DUF3520) BN85311370 PF00072 Response regulator receiver domain BN85311370 PF00486 Transcriptional regulatory protein, C terminal BN85311380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BN85311380 PF00672 HAMP domain BN85311380 PF00512 His Kinase A (phospho-acceptor) domain BN85311420 PF04231 Endonuclease I BN85311430 PF00005 ABC transporter BN85311430 PF12848 ABC transporter BN85311470 PF00528 Binding-protein-dependent transport system inner membrane component BN85311480 PF00497 Bacterial extracellular solute-binding proteins, family 3 BN85311490 PF01371 Trp repressor protein BN85311500 PF02646 RmuC family BN85311520 PF00571 CBS domain BN85311520 PF03471 Transporter associated domain BN85311520 PF01595 Cyclin M transmembrane N-terminal domain BN8531154 PF00849 RNA pseudouridylate synthase BN8531154 PF01479 S4 domain BN85311560 PF01479 S4 domain BN85311560 PF00849 RNA pseudouridylate synthase BN85311570 PF01300 Telomere recombination BN85311570 PF03481 Putative GTP-binding controlling metal-binding BN85311580 PF00990 Diguanylate cyclase, GGDEF domain BN85311590 PF00664 ABC transporter transmembrane region BN85311590 PF00005 ABC transporter BN85311600 PF00005 ABC transporter BN85311600 PF00664 ABC transporter transmembrane region BN85311610 PF00248 Aldo/keto reductase family BN85311660 PF00756 Putative esterase BN85311690 PF00925 GTP cyclohydrolase II BN85311690 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BN85311700 PF01872 RibD C-terminal domain BN85311700 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BN85311710 PF01895 PhoU domain BN85311720 PF00005 ABC transporter BN85311730 PF00528 Binding-protein-dependent transport system inner membrane component BN85311740 PF00528 Binding-protein-dependent transport system inner membrane component BN85311760 PF00486 Transcriptional regulatory protein, C terminal BN85311760 PF00072 Response regulator receiver domain BN85311780 PF00391 PEP-utilising enzyme, mobile domain BN85311780 PF00224 Pyruvate kinase, barrel domain BN85311780 PF02887 Pyruvate kinase, alpha/beta domain BN85311800 PF00005 ABC transporter BN85311850 PF00005 ABC transporter BN85311890 PF01230 HIT domain BN85311910 PF00871 Acetokinase family BN85311920 PF01515 Phosphate acetyl/butaryl transferase BN85311930 PF06733 DEAD_2 BN85311930 PF13307 Helicase C-terminal domain BN85311940 PF00293 NUDIX domain BN85311970 PF00950 ABC 3 transport family BN85311980 PF00950 ABC 3 transport family BN85311990 PF00005 ABC transporter BN85312000 PF01297 Zinc-uptake complex component A periplasmic BN85312010 PF01323 DSBA-like thioredoxin domain BN85312050 PF07694 5TMR of 5TMR-LYT BN85312050 PF00990 Diguanylate cyclase, GGDEF domain BN85312060 PF01966 HD domain BN85312060 PF00072 Response regulator receiver domain BN85312080 PF07664 Ferrous iron transport protein B C terminus BN85312080 PF17910 FeoB cytosolic helical domain BN85312080 PF02421 Ferrous iron transport protein B BN85312080 PF07670 Nucleoside recognition BN85312090 PF01432 Peptidase family M3 BN85312090 PF08439 Oligopeptidase F BN85312100 PF00924 Mechanosensitive ion channel BN85312110 PF00270 DEAD/DEAH box helicase BN85312110 PF03880 DbpA RNA binding domain BN85312110 PF00271 Helicase conserved C-terminal domain BN85312130 PF01479 S4 domain BN85312130 PF00849 RNA pseudouridylate synthase BN85312140 PF00171 Aldehyde dehydrogenase family BN85312160 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BN85312170 PF00230 Major intrinsic protein BN85312180 PF13538 UvrD-like helicase C-terminal domain BN85312180 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain BN85312180 PF14490 Helix-hairpin-helix containing domain BN85312210 PF00795 Carbon-nitrogen hydrolase BN85312210 PF02540 NAD synthase BN85312220 PF01467 Cytidylyltransferase-like BN85312250 PF01795 MraW methylase family BN85312270 PF01783 Ribosomal L32p protein family BN85312310 PF01497 Periplasmic binding protein BN85312320 PF00005 ABC transporter BN85312330 PF01032 FecCD transport family BN85312340 PF01032 FecCD transport family BN85312350 PF00722 Glycosyl hydrolases family 16 BN85312390 PF06426 Serine acetyltransferase, N-terminal BN85312390 PF00132 Bacterial transferase hexapeptide (six repeats) BN85312400 PF00291 Pyridoxal-phosphate dependent enzyme BN85312410 PF00753 Metallo-beta-lactamase superfamily BN85312430 PF01938 TRAM domain BN85312430 PF05958 tRNA (Uracil-5-)-methyltransferase BN85312440 PF03313 Serine dehydratase alpha chain BN85312440 PF03315 Serine dehydratase beta chain BN85312450 PF02074 Carboxypeptidase Taq (M32) metallopeptidase BN85312460 PF00571 CBS domain BN85312460 PF01769 Divalent cation transporter BN85312460 PF03448 MgtE intracellular N domain BN85312470 PF03448 MgtE intracellular N domain BN85312470 PF00571 CBS domain BN85312470 PF01769 Divalent cation transporter BN85312480 PF00005 ABC transporter BN85312480 PF00664 ABC transporter transmembrane region BN85312490 PF00664 ABC transporter transmembrane region BN85312490 PF00005 ABC transporter BN85312530 PF01546 Peptidase family M20/M25/M40 BN85312530 PF07687 Peptidase dimerisation domain BN85312570 PF03009 Glycerophosphoryl diester phosphodiesterase family BN85312580 PF00563 EAL domain BN85312580 PF00990 Diguanylate cyclase, GGDEF domain BN85312580 PF03707 Bacterial signalling protein N terminal repeat BN85312600 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BN85312600 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BN85312620 PF04199 Putative cyclase BN85312630 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BN85312630 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BN85312640 PF00155 Aminotransferase class I and II BN85312680 PF13614 AAA domain BN85312700 PF01432 Peptidase family M3 BN85312700 PF08439 Oligopeptidase F BN85312710 PF00271 Helicase conserved C-terminal domain BN85312710 PF04851 Type III restriction enzyme, res subunit BN85312710 PF02151 UvrB/uvrC motif BN85312710 PF12344 Ultra-violet resistance protein B BN85312710 PF17757 UvrB interaction domain BN85312740 PF02690 Na+/Pi-cotransporter BN85312760 PF00224 Pyruvate kinase, barrel domain BN85312760 PF02887 Pyruvate kinase, alpha/beta domain BN85312760 PF00391 PEP-utilising enzyme, mobile domain BN85312770 PF00365 Phosphofructokinase BN85312780 PF00365 Phosphofructokinase BN85312790 PF01699 Sodium/calcium exchanger protein BN85312810 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BN85312810 PF14579 Helix-hairpin-helix motif BN85312810 PF02811 PHP domain BN85312810 PF01336 OB-fold nucleic acid binding domain BN85312810 PF07733 Bacterial DNA polymerase III alpha NTPase domain BN85312830 PF00005 ABC transporter BN85312830 PF00664 ABC transporter transmembrane region BN85312840 PF00664 ABC transporter transmembrane region BN85312840 PF00005 ABC transporter BN85312850 PF01699 Sodium/calcium exchanger protein BN85312880 PF00665 Integrase core domain BN85312880 PF13333 Integrase core domain BN85312880 PF13276 HTH-like domain BN85312900 PF00005 ABC transporter BN85312900 PF17755 UvrA DNA-binding domain BN85312900 PF17760 UvrA interaction domain BN85312920 PF01638 HxlR-like helix-turn-helix BN85312930 PF13333 Integrase core domain BN85312930 PF01527 Transposase BN85312930 PF13276 HTH-like domain BN85312930 PF00665 Integrase core domain BN85312940 PF13333 Integrase core domain BN85312940 PF13276 HTH-like domain BN85312940 PF00665 Integrase core domain BN85313000 PF01527 Transposase BN85313000 PF13333 Integrase core domain BN85313000 PF00665 Integrase core domain BN85313000 PF13276 HTH-like domain BN85313030 PF00149 Calcineurin-like phosphoesterase BN85313030 PF02872 5'-nucleotidase, C-terminal domain BN85313040 PF00004 ATPase family associated with various cellular activities (AAA) BN85313040 PF17871 AAA lid domain BN85313040 PF02861 Clp amino terminal domain, pathogenicity island component BN85313040 PF07724 AAA domain (Cdc48 subfamily) BN85313040 PF10431 C-terminal, D2-small domain, of ClpB protein BN85313050 PF10431 C-terminal, D2-small domain, of ClpB protein BN85313050 PF17871 AAA lid domain BN85313050 PF00004 ATPase family associated with various cellular activities (AAA) BN85313050 PF07724 AAA domain (Cdc48 subfamily) BN85313050 PF02861 Clp amino terminal domain, pathogenicity island component BN85313060 PF02417 Chromate transporter BN85313100 PF00563 EAL domain BN85313100 PF03707 Bacterial signalling protein N terminal repeat BN85313100 PF00990 Diguanylate cyclase, GGDEF domain BN85313120 PF00072 Response regulator receiver domain BN85313150 PF01048 Phosphorylase superfamily BN85313160 PF00485 Phosphoribulokinase / Uridine kinase family BN85313170 PF01554 MatE BN85313190 PF01923 Cobalamin adenosyltransferase BN85313200 PF17820 PDZ domain BN85313200 PF02163 Peptidase family M50 BN85313210 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BN85313210 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BN85313210 PF13288 DXP reductoisomerase C-terminal domain BN85313230 PF01255 Putative undecaprenyl diphosphate synthase BN85313250 PF01765 Ribosome recycling factor BN85313260 PF00696 Amino acid kinase family BN85313270 PF00889 Elongation factor TS BN85313280 PF00318 Ribosomal protein S2 BN85313280 PF07498 Rho termination factor, N-terminal domain BN85313320 PF00692 dUTPase BN85313330 PF00293 NUDIX domain BN85313340 PF00589 Phage integrase family BN85313340 PF02899 Phage integrase, N-terminal SAM-like domain BN85313350 PF01134 Glucose inhibited division protein A BN85313360 PF00356 Bacterial regulatory proteins, lacI family BN85313380 PF13416 Bacterial extracellular solute-binding protein BN85313390 PF00528 Binding-protein-dependent transport system inner membrane component BN85313400 PF00528 Binding-protein-dependent transport system inner membrane component BN85313430 PF03167 Uracil DNA glycosylase superfamily BN85313440 PF00583 Acetyltransferase (GNAT) family BN85313450 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BN85313450 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BN85313460 PF01513 ATP-NAD kinase BN85313480 PF03960 ArsC family BN85313490 PF01432 Peptidase family M3 BN85313490 PF08439 Oligopeptidase F BN85313500 PF00579 tRNA synthetases class I (W and Y) BN85313520 PF00781 Diacylglycerol kinase catalytic domain BN85313530 PF00579 tRNA synthetases class I (W and Y) BN85313530 PF01479 S4 domain BN85313540 PF00356 Bacterial regulatory proteins, lacI family BN85313550 PF01245 Ribosomal protein L19 BN85313560 PF01746 tRNA (Guanine-1)-methyltransferase BN85313570 PF01782 RimM N-terminal domain BN85313570 PF05239 PRC-barrel domain BN85313590 PF00886 Ribosomal protein S16 BN85313620 PF01327 Polypeptide deformylase BN85313650 PF00588 SpoU rRNA Methylase family BN85313650 PF08032 RNA 2'-O ribose methyltransferase substrate binding BN85313660 PF02568 Thiamine biosynthesis protein (ThiI) BN85313660 PF02926 THUMP domain BN85313670 PF13185 GAF domain BN85313680 PF01479 S4 domain BN85313680 PF00163 Ribosomal protein S4/S9 N-terminal domain BN85313690 PF00990 Diguanylate cyclase, GGDEF domain BN85313760 PF01593 Flavin containing amine oxidoreductase BN85313770 PF00011 Hsp20/alpha crystallin family BN85313780 PF00121 Triosephosphate isomerase BN85313790 PF00381 PTS HPr component phosphorylation site BN85313810 PF00162 Phosphoglycerate kinase BN85313830 PF00005 ABC transporter BN85313830 PF17912 MalK OB fold domain BN85313830 PF03459 TOBE domain BN85313850 PF05651 Putative sugar diacid recognition BN85313850 PF17853 GGDEF-like domain BN85313850 PF13556 PucR C-terminal helix-turn-helix domain BN85313870 PF01458 Uncharacterized protein family (UPF0051) BN85313880 PF01592 NifU-like N terminal domain BN85313890 PF00266 Aminotransferase class-V BN85313900 PF01458 Uncharacterized protein family (UPF0051) BN85313910 PF00005 ABC transporter BN85313930 PF00005 ABC transporter BN85313930 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BN85313940 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BN85313940 PF00005 ABC transporter BN85313950 PF12911 N-terminal TM domain of oligopeptide transport permease C BN85313950 PF00528 Binding-protein-dependent transport system inner membrane component BN85313960 PF00528 Binding-protein-dependent transport system inner membrane component BN85313990 PF00746 LPXTG cell wall anchor motif BN85313990 PF12354 Bacterial adhesion/invasion protein N terminal BN85313990 PF12799 Leucine Rich repeats (2 copies) BN85313990 PF08191 LRR adjacent BN85313990 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) BN85314020 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BN85314020 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II BN85314020 PF10371 Domain of unknown function BN85314020 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase BN85314020 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg BN85314030 PF00578 AhpC/TSA family BN85314150 PF00884 Sulfatase BN85314180 PF02142 MGS-like domain BN85314190 PF02899 Phage integrase, N-terminal SAM-like domain BN85314190 PF00589 Phage integrase family BN85314220 PF16657 Maltogenic Amylase, C-terminal domain BN85314220 PF02903 Alpha amylase, N-terminal ig-like domain BN85314220 PF00128 Alpha amylase, catalytic domain BN85314230 PF13396 Phospholipase_D-nuclease N-terminal BN85314230 PF13091 PLD-like domain BN85314290 PF00375 Sodium:dicarboxylate symporter family BN85314300 PF01594 AI-2E family transporter BN85314320 PF00210 Ferritin-like domain BN85314330 PF02645 Uncharacterised protein, DegV family COG1307 BN85314340 PF13520 Amino acid permease BN85314360 PF04304 Protein of unknown function (DUF454) BN85314390 PF00326 Prolyl oligopeptidase family BN85314390 PF07676 WD40-like Beta Propeller Repeat BN85314440 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) BN85314440 PF07581 The GLUG motif BN85314460 PF00933 Glycosyl hydrolase family 3 N terminal domain BN85314470 PF00528 Binding-protein-dependent transport system inner membrane component BN85314480 PF00528 Binding-protein-dependent transport system inner membrane component BN85314510 PF01638 HxlR-like helix-turn-helix BN85314550 PF00075 RNase H BN85314590 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BN85314600 PF01613 Flavin reductase like domain BN85314610 PF01738 Dienelactone hydrolase family BN85314630 PF08281 Sigma-70, region 4 BN85314630 PF04542 Sigma-70 region 2 BN85314690 PF00873 AcrB/AcrD/AcrF family BN85314730 PF01593 Flavin containing amine oxidoreductase BN85314740 PF03109 ABC1 family BN85314750 PF00781 Diacylglycerol kinase catalytic domain BN85314760 PF00005 ABC transporter BN85314760 PF00571 CBS domain BN85314770 PF00528 Binding-protein-dependent transport system inner membrane component BN85314790 PF00924 Mechanosensitive ion channel BN85314830 PF07694 5TMR of 5TMR-LYT BN85314830 PF00990 Diguanylate cyclase, GGDEF domain BN85314840 PF00183 Hsp90 protein BN85314850 PF13276 HTH-like domain BN85314850 PF00665 Integrase core domain BN85314850 PF13333 Integrase core domain BN85314860 PF01527 Transposase BN85314870 PF00990 Diguanylate cyclase, GGDEF domain BN85314870 PF17156 Gammaproteobacterial periplasmic sensor domain BN85314900 PF04231 Endonuclease I BN85314960 PF00005 ABC transporter BN85314960 PF00664 ABC transporter transmembrane region BN85314970 PF00271 Helicase conserved C-terminal domain BN85314970 PF00270 DEAD/DEAH box helicase BN85314990 PF00005 ABC transporter BN85315010 PF00990 Diguanylate cyclase, GGDEF domain BN85315020 PF00296 Luciferase-like monooxygenase BN85315070 PF00563 EAL domain BN85315070 PF13185 GAF domain BN85315070 PF00990 Diguanylate cyclase, GGDEF domain BN85315080 PF00563 EAL domain BN85315080 PF13426 PAS domain BN85315080 PF00990 Diguanylate cyclase, GGDEF domain BN85315110 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BN85315110 PF00005 ABC transporter BN85315120 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BN85315120 PF00005 ABC transporter BN85315140 PF00528 Binding-protein-dependent transport system inner membrane component BN85315190 PF00860 Permease family BN85315220 PF01022 Bacterial regulatory protein, arsR family BN85315240 PF01527 Transposase BN85315250 PF13333 Integrase core domain BN85315250 PF00665 Integrase core domain BN85315250 PF13276 HTH-like domain BN85315290 PF00005 ABC transporter BN85315360 PF00403 Heavy-metal-associated domain BN85315370 PF00403 Heavy-metal-associated domain BN85315490 PF13276 HTH-like domain BN85315490 PF00665 Integrase core domain BN85315490 PF13333 Integrase core domain BN85315500 PF01527 Transposase BN85315510 PF17841 BID domain of Bartonella effector protein (Bep) BN85315510 PF02661 Fic/DOC family BN85315570 PF00106 short chain dehydrogenase BN85315580 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BN85315580 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BN85315590 PF00294 pfkB family carbohydrate kinase BN85315670 PF05649 Peptidase family M13 BN85315670 PF01431 Peptidase family M13 BN85315770 PF01661 Macro domain BN85315830 PF03590 Aspartate-ammonia ligase BN85315870 PF17674 HHH domain BN85315870 PF00575 S1 RNA binding domain BN85315870 PF09371 Tex-like protein N-terminal domain BN85315870 PF16921 Tex protein YqgF-like domain BN85315890 PF01648 4'-phosphopantetheinyl transferase superfamily BN85315900 PF14527 WhiA LAGLIDADG-like domain BN85315900 PF02650 WhiA C-terminal HTH domain BN85315900 PF10298 WhiA N-terminal LAGLIDADG-like domain BN85315910 PF07992 Pyridine nucleotide-disulphide oxidoreductase BN85315920 PF13419 Haloacid dehalogenase-like hydrolase BN85315930 PF01790 Prolipoprotein diacylglyceryl transferase BN85315940 PF07475 HPr Serine kinase C-terminal domain BN85315940 PF02603 HPr Serine kinase N terminus BN85315960 PF17755 UvrA DNA-binding domain BN85315960 PF00005 ABC transporter BN85315960 PF17760 UvrA interaction domain BN85315970 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BN85315970 PF00533 BRCA1 C Terminus (BRCT) domain BN85315970 PF01653 NAD-dependent DNA ligase adenylation domain BN85315970 PF12826 Helix-hairpin-helix motif BN85315970 PF03120 NAD-dependent DNA ligase OB-fold domain BN85315980 PF00580 UvrD/REP helicase N-terminal domain BN85315980 PF13361 UvrD-like helicase C-terminal domain BN85315990 PF13361 UvrD-like helicase C-terminal domain BN85315990 PF00580 UvrD/REP helicase N-terminal domain BN85316000 PF00749 tRNA synthetases class I (E and Q), catalytic domain BN85316000 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain BN85316010 PF00814 Glycoprotease family BN85316030 PF00814 Glycoprotease family BN85316040 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BN85316050 PF00665 Integrase core domain BN85316050 PF13276 HTH-like domain BN85316050 PF13333 Integrase core domain BN85316060 PF03412 Peptidase C39 family BN85316060 PF00664 ABC transporter transmembrane region BN85316060 PF00005 ABC transporter BN85316080 PF00342 Phosphoglucose isomerase BN85316110 PF04542 Sigma-70 region 2 BN85316110 PF08281 Sigma-70, region 4 BN85316120 PF00575 S1 RNA binding domain BN85316140 PF02645 Uncharacterised protein, DegV family COG1307 BN85316150 PF02681 Divergent PAP2 family BN85316160 PF01106 NifU-like domain BN85316180 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BN85316180 PF02542 YgbB family BN85316220 PF02457 DisA bacterial checkpoint controller nucleotide-binding BN85316230 PF00317 Ribonucleotide reductase, all-alpha domain BN85316230 PF03477 ATP cone domain BN85316230 PF02867 Ribonucleotide reductase, barrel domain BN85316240 PF01926 50S ribosome-binding GTPase BN85316240 PF13167 GTP-binding GTPase N-terminal BN85316240 PF16360 GTP-binding GTPase Middle Region BN85316260 PF01207 Dihydrouridine synthase (Dus) BN85316270 PF01430 Hsp33 protein BN85316280 PF01527 Transposase BN85316290 PF13333 Integrase core domain BN85316290 PF00665 Integrase core domain BN85316290 PF13276 HTH-like domain BN85316320 PF13597 Anaerobic ribonucleoside-triphosphate reductase BN85316320 PF03477 ATP cone domain BN85316330 PF02545 Maf-like protein BN85316340 PF01171 PP-loop family BN85316340 PF11734 TilS substrate C-terminal domain BN85316360 PF01434 Peptidase family M41 BN85316360 PF17862 AAA+ lid domain BN85316360 PF00004 ATPase family associated with various cellular activities (AAA) BN85316370 PF01479 S4 domain BN85316380 PF01336 OB-fold nucleic acid binding domain BN85316380 PF00152 tRNA synthetases class II (D, K and N) BN85316430 PF01116 Fructose-bisphosphate aldolase class-II BN85316440 PF06418 CTP synthase N-terminus BN85316440 PF00117 Glutamine amidotransferase class-I BN85316480 PF02132 RecR protein BN85316480 PF13662 Toprim domain BN85316500 PF12169 DNA polymerase III subunits gamma and tau domain III BN85316510 PF01926 50S ribosome-binding GTPase BN85316510 PF10396 GTP-binding protein TrmE N-terminus BN85316510 PF12631 MnmE helical domain BN85316520 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BN85316530 PF02308 MgtC family BN85316540 PF01171 PP-loop family BN85316550 PF02272 DHHA1 domain BN85316550 PF01368 DHH family BN85316560 PF02272 DHHA1 domain BN85316560 PF01368 DHH family BN85316570 PF02896 PEP-utilising enzyme, TIM barrel domain BN85316570 PF00391 PEP-utilising enzyme, mobile domain BN85316570 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BN85316630 PF03477 ATP cone domain BN85316630 PF02867 Ribonucleotide reductase, barrel domain BN85316630 PF00317 Ribonucleotide reductase, all-alpha domain BN85316650 PF00990 Diguanylate cyclase, GGDEF domain BN85316650 PF07694 5TMR of 5TMR-LYT BN85316660 PF14748 Pyrroline-5-carboxylate reductase dimerisation BN85316660 PF03807 NADP oxidoreductase coenzyme F420-dependent BN85316680 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BN85316740 PF00005 ABC transporter BN85316740 PF12704 MacB-like periplasmic core domain BN85316740 PF02687 FtsX-like permease family BN85316800 PF00118 TCP-1/cpn60 chaperonin family BN85316810 PF00166 Chaperonin 10 Kd subunit BN85316840 PF13086 AAA domain BN85316840 PF13087 AAA domain BN85316840 PF13195 Protein of unknown function (DUF4011) BN85316840 PF13087 AAA domain BN85316840 PF13195 Protein of unknown function (DUF4011) BN85316840 PF13086 AAA domain BN85316860 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) BN85316860 PF18766 SWI2/SNF2 ATPase BN85316860 PF11867 Domain of unknown function (DUF3387) BN85316870 PF01420 Type I restriction modification DNA specificity domain BN85316880 PF02384 N-6 DNA Methylase BN85316930 PF00528 Binding-protein-dependent transport system inner membrane component BN85316950 PF17912 MalK OB fold domain BN85316950 PF00005 ABC transporter BN85316970 PF01336 OB-fold nucleic acid binding domain BN85316970 PF00152 tRNA synthetases class II (D, K and N) BN85316980 PF00534 Glycosyl transferases group 1 BN85316980 PF13439 Glycosyltransferase Family 4 BN85317020 PF02096 60Kd inner membrane protein BN85317030 PF00825 Ribonuclease P BN85317040 PF00468 Ribosomal protein L34