locus-tag	class	description
FOC80_00010	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
FOC80_00020	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
FOC80_00025	COG1181	Belongs to the D-alanine--D-alanine ligase family
FOC80_00030	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
FOC80_00045	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
FOC80_00050	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
FOC80_00055	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
FOC80_00065	COG3116	cell division
FOC80_00070	COG0275	rRNA processing
FOC80_00075	COG2001	Belongs to the MraZ family
FOC80_00090	COG0418	dihydroorotase activity
FOC80_00095	COG1473	amidohydrolase
FOC80_00105	COG0583	DNA-binding transcription factor activity
FOC80_00110	COG1280	lysine exporter protein (LysE YggA)
FOC80_00165	COG1522	sequence-specific DNA binding
FOC80_00175	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FOC80_00180	COG4654	Cytochrome c, class I
FOC80_00185	COG0129	dihydroxy-acid dehydratase activity
FOC80_00230	COG2084	Dehydrogenase
FOC80_00245	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FOC80_00280	COG0824	Thioesterase
FOC80_00285	COG0811	peptide transport
FOC80_00290	COG0848	biopolymer transport protein
FOC80_00300	COG0823	Involved in the tonB-independent uptake of proteins
FOC80_00315	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOC80_00320	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
FOC80_00335	COG1522	sequence-specific DNA binding
FOC80_00345	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
FOC80_00360	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC80_00365	COG0697	spore germination
FOC80_00375	COG1346	cytolysis
FOC80_00385	COG0583	DNA-binding transcription factor activity
FOC80_00400	COG0583	DNA-binding transcription factor activity
FOC80_00415	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
FOC80_00420	COG0463	Glycosyl transferase, family 2
FOC80_00430	COG0786	glutamate:sodium symporter activity
FOC80_00445	COG1671	Belongs to the UPF0178 family
FOC80_00460	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
FOC80_00465	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FOC80_00475	COG0328	RNA-DNA hybrid ribonuclease activity
FOC80_00480	COG2226	methyltransferase
FOC80_00485	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOC80_00490	COG1388	LysM domain
FOC80_00490	COG0741	lytic transglycosylase activity
FOC80_00510	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_00530	COG1366	Belongs to the anti-sigma-factor antagonist family
FOC80_00535	COG2172	sigma factor antagonist activity
FOC80_00540	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
FOC80_00550	COG2208	phosphoserine phosphatase activity
FOC80_00550	COG2770	Histidine kinase
FOC80_00580	COG4792	protein secretion
FOC80_00585	COG4791	protein targeting
FOC80_00590	COG4794	Type iii secretion
FOC80_00595	COG4790	Type iii secretion
FOC80_00600	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FOC80_00630	COG4669	(LipO)protein
FOC80_00700	COG4789	Type iii secretion
FOC80_00735	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_00755	COG2719	SpoVR family
FOC80_00760	COG2718	Belongs to the UPF0229 family
FOC80_00765	COG2766	serine protein kinase
FOC80_00770	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FOC80_00770	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FOC80_00780	COG2207	Transcriptional regulator
FOC80_00785	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
FOC80_00790	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
FOC80_00795	COG1280	lysine exporter protein (LysE YggA)
FOC80_00805	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
FOC80_00815	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
FOC80_00820	COG0316	Belongs to the HesB IscA family
FOC80_00830	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
FOC80_00835	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
FOC80_00840	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
FOC80_00855	COG4177	L-phenylalanine transmembrane transporter activity
FOC80_00860	COG0559	Belongs to the binding-protein-dependent transport system permease family
FOC80_00870	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
FOC80_00875	COG0312	modulator of DNA gyrase
FOC80_00880	COG3028	Belongs to the UPF0307 family
FOC80_00895	COG1116	anion transmembrane transporter activity
FOC80_00900	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FOC80_00905	COG1335	isochorismatase
FOC80_00910	COG0045	succinate-CoA ligase (ADP-forming) activity
FOC80_00910	COG1042	CoA-binding domain protein
FOC80_00910	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOC80_00915	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
FOC80_00920	COG0477	Major facilitator Superfamily
FOC80_00930	COG0583	DNA-binding transcription factor activity
FOC80_00945	COG1522	sequence-specific DNA binding
FOC80_00970	COG0762	integral membrane protein
FOC80_00975	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FOC80_00980	COG1696	Membrane protein involved in D-alanine export
FOC80_01005	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
FOC80_01005	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
FOC80_01015	COG2264	protein methyltransferase activity
FOC80_01020	COG0439	Biotin carboxylase
FOC80_01025	COG0511	ligase activity, forming carbon-carbon bonds
FOC80_01030	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
FOC80_01035	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FOC80_01040	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
FOC80_01045	COG3150	esterase
FOC80_01050	COG0557	exoribonuclease II activity
FOC80_01060	COG0642	Histidine kinase
FOC80_01070	COG1175	transmembrane transport
FOC80_01085	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
FOC80_01090	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FOC80_01100	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
FOC80_01105	COG1126	abc transporter atp-binding protein
FOC80_01110	COG0765	amino acid transport
FOC80_01120	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC80_01130	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
FOC80_01150	COG0540	Belongs to the ATCase OTCase family
FOC80_01155	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
FOC80_01160	COG1678	Uncharacterized ACR, COG1678
FOC80_01170	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
FOC80_01170	COG0352	thiamine-phosphate diphosphorylase activity
FOC80_01170	COG0351	phosphomethylpyrimidine kinase
FOC80_01175	COG0352	thiamine-phosphate diphosphorylase activity
FOC80_01180	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
FOC80_01185	COG0741	lytic transglycosylase activity
FOC80_01195	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_01200	COG1335	isochorismatase
FOC80_01210	COG4638	Rieske (2fe-2S)
FOC80_01225	COG2207	Transcriptional regulator
FOC80_01250	COG1024	Enoyl-CoA hydratase
FOC80_01255	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_01270	COG3706	GGDEF domain
FOC80_01365	COG0583	DNA-binding transcription factor activity
FOC80_01375	COG0154	amidase activity
FOC80_01395	COG4774	siderophore transport
FOC80_01410	COG0583	DNA-binding transcription factor activity
FOC80_01415	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_01430	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FOC80_01450	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
FOC80_01455	COG0237	dephospho-CoA kinase activity
FOC80_01475	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
FOC80_01480	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
FOC80_01490	COG0477	Major facilitator Superfamily
FOC80_01505	COG1194	a g-specific adenine glycosylase
FOC80_01535	COG4214	carbohydrate transport
FOC80_01550	COG0028	Belongs to the TPP enzyme family
FOC80_01555	COG1802	Transcriptional regulator
FOC80_01565	COG2226	methyltransferase
FOC80_01580	COG4771	TonB-dependent receptor
FOC80_01585	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FOC80_01590	COG2022	thiamine diphosphate biosynthetic process
FOC80_01595	COG0351	phosphomethylpyrimidine kinase
FOC80_01600	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
FOC80_01610	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
FOC80_01620	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
FOC80_01635	COG2226	methyltransferase
FOC80_01640	COG0745	RESPONSE REGULATOR receiver
FOC80_01645	COG5002	protein histidine kinase activity
FOC80_01660	COG3241	Transfers electrons from cytochrome c551 to cytochrome oxidase
FOC80_01665	COG2132	Multicopper oxidase
FOC80_01680	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FOC80_01695	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
FOC80_01700	COG1984	allophanate hydrolase subunit 2
FOC80_01710	COG1802	Transcriptional regulator
FOC80_01715	COG2860	membrane
FOC80_01725	COG2223	nitrite transmembrane transporter activity
FOC80_01730	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
FOC80_01730	COG2813	Specifically methylates the guanine in position
FOC80_01735	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
FOC80_01740	COG2188	Transcriptional regulator
FOC80_01745	COG2721	sulfolactate sulfo-lyase activity
FOC80_01750	COG2721	sulfolactate sulfo-lyase activity
FOC80_01760	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FOC80_01765	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
FOC80_01790	COG2918	glutathione biosynthetic process
FOC80_01810	COG0583	DNA-binding transcription factor activity
FOC80_01815	COG1802	Transcriptional regulator
FOC80_01820	COG0179	Fumarylacetoacetate (FAA) hydrolase
FOC80_01835	COG2197	response regulator
FOC80_01840	COG2205	protein histidine kinase activity
FOC80_01840	COG0784	Response regulator, receiver
FOC80_01850	COG2205	protein histidine kinase activity
FOC80_01850	COG0784	Response regulator, receiver
FOC80_01865	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_01870	COG3246	L-lysine catabolic process to acetate
FOC80_01900	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_01920	COG1250	3-hydroxyacyl-CoA dehydrogenase
FOC80_01935	COG1309	transcriptional regulator
FOC80_01945	COG1024	Enoyl-CoA hydratase
FOC80_01950	COG1024	Enoyl-CoA hydratase
FOC80_01955	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
FOC80_01965	COG0747	negative chemotaxis
FOC80_01970	COG0583	DNA-binding transcription factor activity
FOC80_01975	COG2988	succinylglutamate desuccinylase activity
FOC80_01980	COG0747	negative chemotaxis
FOC80_01985	COG0601	transmembrane transport
FOC80_01990	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOC80_02000	COG4608	Belongs to the ABC transporter superfamily
FOC80_02010	COG2195	Cleaves the N-terminal amino acid of tripeptides
FOC80_02020	COG2171	N-acyltransferase activity
FOC80_02030	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
FOC80_02035	COG0210	DNA helicase
FOC80_02040	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
FOC80_02045	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
FOC80_02055	COG0355	proton-transporting ATP synthase activity, rotational mechanism
FOC80_02065	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
FOC80_02070	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
FOC80_02075	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
FOC80_02090	COG0356	it plays a direct role in the translocation of protons across the membrane
FOC80_02105	COG1024	Enoyl-CoA hydratase
FOC80_02115	COG0583	DNA-binding transcription factor activity
FOC80_02120	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_02125	COG3473	Maleate cis-trans isomerase
FOC80_02130	COG0583	DNA-binding transcription factor activity
FOC80_02135	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
FOC80_02145	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
FOC80_02170	COG0037	tRNA processing
FOC80_02175	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FOC80_02185	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FOC80_02190	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
FOC80_02195	COG2967	ApaG domain
FOC80_02200	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
FOC80_02205	COG0546	phosphoglycolate phosphatase activity
FOC80_02215	COG0512	Glutamine amidotransferase of anthranilate synthase
FOC80_02220	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
FOC80_02225	COG0134	indole-3-glycerol-phosphate synthase activity
FOC80_02230	COG3284	Transcriptional regulator
FOC80_02235	COG1012	belongs to the aldehyde dehydrogenase family
FOC80_02260	COG0583	DNA-binding transcription factor activity
FOC80_02270	COG1305	Transglutaminase-like
FOC80_02275	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FOC80_02285	COG3276	selenocysteine insertion sequence binding
FOC80_02300	COG2864	formate dehydrogenase
FOC80_02305	COG0437	4 iron, 4 sulfur cluster binding
FOC80_02320	COG1607	acyl-coa hydrolase
FOC80_02355	COG3064	Membrane
FOC80_02360	COG3585	molybdate ion transport
FOC80_02385	COG3069	C4-dicarboxylate transmembrane transporter activity
FOC80_02395	COG1802	Transcriptional regulator
FOC80_02445	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
FOC80_02450	COG1473	amidohydrolase
FOC80_02455	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_02460	COG0583	DNA-binding transcription factor activity
FOC80_02465	COG2814	Major facilitator Superfamily
FOC80_02490	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
FOC80_02505	COG2188	Transcriptional regulator
FOC80_02520	COG0438	transferase activity, transferring glycosyl groups
FOC80_02530	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
FOC80_02535	COG0218	Necessary for normal cell division and for the maintenance of normal septation
FOC80_02550	COG2423	ornithine cyclodeaminase activity
FOC80_02555	COG1522	sequence-specific DNA binding
FOC80_02565	COG2423	ornithine cyclodeaminase activity
FOC80_02580	COG0583	DNA-binding transcription factor activity
FOC80_02590	COG0583	DNA-binding transcription factor activity
FOC80_02595	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_02600	COG0154	amidase activity
FOC80_02630	COG0484	heat shock protein binding
FOC80_02640	COG0861	Integral membrane protein TerC family
FOC80_02645	COG0477	Major facilitator Superfamily
FOC80_02655	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_02660	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_02670	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_02680	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FOC80_02690	COG2188	Transcriptional regulator
FOC80_02720	COG1522	sequence-specific DNA binding
FOC80_02735	COG2814	Major facilitator Superfamily
FOC80_02740	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
FOC80_02760	COG1999	signal sequence binding
FOC80_02770	COG1612	heme a metabolic process
FOC80_02800	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
FOC80_02820	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
FOC80_02850	COG0069	glutamate synthase activity
FOC80_02850	COG0067	glutamate synthase
FOC80_02850	COG0070	glutamate synthase
FOC80_02865	COG0583	DNA-binding transcription factor activity
FOC80_02870	COG0477	Major facilitator Superfamily
FOC80_02880	COG2070	2-Nitropropane dioxygenase
FOC80_02885	COG1127	ABC transporter
FOC80_02890	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
FOC80_02895	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
FOC80_02900	COG2853	Lipoprotein
FOC80_02910	COG1131	(ABC) transporter
FOC80_02915	COG0842	Transport permease protein
FOC80_02920	COG0271	Belongs to the BolA IbaG family
FOC80_02925	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
FOC80_02930	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
FOC80_02935	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
FOC80_02940	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
FOC80_02945	COG0131	Imidazoleglycerol-phosphate dehydratase
FOC80_02950	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
FOC80_02955	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
FOC80_02960	COG0107	imidazoleglycerol-phosphate synthase activity
FOC80_02970	COG0140	phosphoribosyl-ATP diphosphatase activity
FOC80_02975	COG0537	adenosine 5'-monophosphoramidase activity
FOC80_02980	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
FOC80_02985	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
FOC80_03000	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FOC80_03005	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
FOC80_03015	COG0477	Major facilitator Superfamily
FOC80_03025	COG0235	Class ii aldolase
FOC80_03030	COG1970	mechanosensitive ion channel activity
FOC80_03035	COG0723	plastoquinol--plastocyanin reductase activity
FOC80_03040	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
FOC80_03045	COG2857	Cytochrome c1
FOC80_03050	COG0625	glutathione transferase activity
FOC80_03055	COG2969	positive regulation of protein catabolic process
FOC80_03085	COG0583	DNA-binding transcription factor activity
FOC80_03095	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
FOC80_03115	COG1160	GTP binding
FOC80_03120	COG0747	negative chemotaxis
FOC80_03125	COG0601	transmembrane transport
FOC80_03130	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOC80_03140	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
FOC80_03145	COG5339	Protein conserved in bacteria
FOC80_03150	COG0513	Belongs to the DEAD box helicase family
FOC80_03155	COG1280	lysine exporter protein (LysE YggA)
FOC80_03160	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
FOC80_03180	COG0583	DNA-binding transcription factor activity
FOC80_03190	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
FOC80_03200	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
FOC80_03210	COG1609	Transcriptional regulator
FOC80_03215	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
FOC80_03220	COG3842	ATPase activity
FOC80_03225	COG1653	transport
FOC80_03230	COG1175	transmembrane transport
FOC80_03235	COG0395	ABC-type sugar transport system, permease component
FOC80_03240	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_03250	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
FOC80_03270	COG0018	arginyl-trna synthetase
FOC80_03280	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
FOC80_03290	COG0778	Nitroreductase
FOC80_03315	COG1473	amidohydrolase
FOC80_03320	COG1960	acyl-CoA dehydrogenase activity
FOC80_03325	COG4579	[isocitrate dehydrogenase (NADP+)] phosphatase activity
FOC80_03330	COG0183	Belongs to the thiolase family
FOC80_03335	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
FOC80_03355	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC80_03365	COG0492	ferredoxin-NADP+ reductase activity
FOC80_03370	COG0583	DNA-binding transcription factor activity
FOC80_03380	COG0477	Major facilitator Superfamily
FOC80_03405	COG2985	domain, Protein
FOC80_03410	COG1982	Orn Lys Arg decarboxylase major
FOC80_03420	COG0668	transmembrane transport
FOC80_03435	COG0693	protein deglycase activity
FOC80_03480	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
FOC80_03495	COG1595	DNA-templated transcription, initiation
FOC80_03500	COG3712	iron ion homeostasis
FOC80_03585	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_03600	COG0318	PFAM AMP-dependent synthetase and ligase
FOC80_03605	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
FOC80_03635	COG2358	TRAP transporter, solute receptor (TAXI family
FOC80_03645	COG2922	Belongs to the Smg family
FOC80_03650	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
FOC80_03670	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
FOC80_03675	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FOC80_03680	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_03685	COG0028	Belongs to the TPP enzyme family
FOC80_03690	COG1522	sequence-specific DNA binding
FOC80_03695	COG3781	membrane
FOC80_03710	COG2814	Major facilitator Superfamily
FOC80_03725	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FOC80_03740	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
FOC80_03750	COG1744	ABC transporter substrate-binding protein PnrA-like
FOC80_03770	COG0402	S-adenosylhomocysteine deaminase activity
FOC80_03775	COG0251	oxidation-reduction process
FOC80_03800	COG1177	transmembrane transport
FOC80_03805	COG1176	ABC-type spermidine putrescine transport system, permease component I
FOC80_03810	COG3842	ATPase activity
FOC80_03835	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_03860	COG1304	FMN binding
FOC80_03885	COG1126	abc transporter atp-binding protein
FOC80_03890	COG0765	amino acid transport
FOC80_03895	COG0765	amino acid transport
FOC80_03900	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC80_03905	COG0583	DNA-binding transcription factor activity
FOC80_03910	COG2186	Transcriptional regulator
FOC80_03915	COG0129	dihydroxy-acid dehydratase activity
FOC80_03920	COG0477	Major facilitator Superfamily
FOC80_03930	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FOC80_03955	COG1917	Cupin 2, conserved barrel domain protein
FOC80_03960	COG0154	amidase activity
FOC80_03965	COG1126	abc transporter atp-binding protein
FOC80_03980	COG0592	DNA-directed DNA polymerase activity
FOC80_03985	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
FOC80_03990	COG0230	Belongs to the bacterial ribosomal protein bL34 family
FOC80_03995	COG0594	ribonuclease P activity
FOC80_04000	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
FOC80_04010	COG0753	catalase activity
FOC80_04020	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
FOC80_04030	COG2175	clavaminate synthase activity
FOC80_04035	COG1473	amidohydrolase
FOC80_04040	COG4608	Belongs to the ABC transporter superfamily
FOC80_04045	COG0444	Belongs to the ABC transporter superfamily
FOC80_04050	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOC80_04055	COG0601	transmembrane transport
FOC80_04065	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
FOC80_04090	COG0038	chloride channel
FOC80_04100	COG0642	Histidine kinase
FOC80_04120	COG0436	Aminotransferase
FOC80_04125	COG3180	Ammonia monooxygenase
FOC80_04130	COG1278	Cold shock
FOC80_04135	COG0445	tRNA wobble uridine modification
FOC80_04140	COG0357	Ribosomal RNA small subunit methyltransferase G
FOC80_04145	COG1192	Involved in chromosome partitioning
FOC80_04155	COG1475	DNA binding
FOC80_04160	COG0252	asparaginase activity
FOC80_04165	COG0583	DNA-binding transcription factor activity
FOC80_04190	COG1349	DNA-binding transcription factor activity
FOC80_04200	COG3842	ATPase activity
FOC80_04205	COG1840	ABC-type Fe3 transport system, periplasmic component
FOC80_04220	COG1012	belongs to the aldehyde dehydrogenase family
FOC80_04245	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
FOC80_04255	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
FOC80_04265	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
FOC80_04270	COG0081	regulation of translation
FOC80_04275	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
FOC80_04280	COG0222	ribosome binding
FOC80_04285	COG0085	RNA polymerase activity
FOC80_04290	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
FOC80_04305	COG5002	protein histidine kinase activity
FOC80_04320	COG0745	RESPONSE REGULATOR receiver
FOC80_04325	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
FOC80_04330	COG0049	tRNA binding
FOC80_04335	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
FOC80_04340	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
FOC80_04345	COG0051	transcription antitermination factor activity, RNA binding
FOC80_04350	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
FOC80_04360	COG0089	rRNA binding
FOC80_04365	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
FOC80_04370	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
FOC80_04375	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
FOC80_04380	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
FOC80_04385	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
FOC80_04390	COG0255	Belongs to the universal ribosomal protein uL29 family
FOC80_04395	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
FOC80_04410	COG4177	L-phenylalanine transmembrane transporter activity
FOC80_04435	COG2207	Transcriptional regulator
FOC80_04460	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
FOC80_04465	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
FOC80_04470	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
FOC80_04475	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
FOC80_04480	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
FOC80_04485	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
FOC80_04490	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
FOC80_04495	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
FOC80_04500	COG1841	ribosomal large subunit assembly
FOC80_04505	COG0200	Binds to the 23S rRNA
FOC80_04510	COG0201	protein transport
FOC80_04515	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
FOC80_04520	COG0257	Belongs to the bacterial ribosomal protein bL36 family
FOC80_04525	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
FOC80_04530	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
FOC80_04535	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
FOC80_04540	COG0202	RNA polymerase activity
FOC80_04545	COG0203	ribosomal protein L17
FOC80_04555	COG1324	tolerance protein
FOC80_04560	COG4232	protein-disulfide reductase activity
FOC80_04570	COG1053	succinate dehydrogenase
FOC80_04575	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_04580	COG0683	leucine binding
FOC80_04610	COG0218	Necessary for normal cell division and for the maintenance of normal septation
FOC80_04625	COG1333	cytochrome c biogenesis protein
FOC80_04630	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FOC80_04635	COG0019	diaminopimelate decarboxylase activity
FOC80_04645	COG1965	Belongs to the frataxin family
FOC80_04655	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
FOC80_04660	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
FOC80_04665	COG0232	Belongs to the dGTPase family. Type 2 subfamily
FOC80_04670	COG1473	amidohydrolase
FOC80_04680	COG0583	DNA-binding transcription factor activity
FOC80_04685	COG0625	glutathione transferase activity
FOC80_04695	COG2814	Major facilitator Superfamily
FOC80_04725	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
FOC80_04760	COG2186	Transcriptional regulator
FOC80_04785	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC80_04790	COG1956	GAF domain-containing protein
FOC80_04795	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FOC80_04810	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FOC80_04835	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
FOC80_04840	COG3568	Endonuclease Exonuclease Phosphatase
FOC80_04850	COG0697	spore germination
FOC80_04855	COG2814	Major facilitator Superfamily
FOC80_04880	COG2226	methyltransferase
FOC80_04890	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
FOC80_04905	COG0367	asparagine synthase
FOC80_04940	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
FOC80_04965	COG1086	Polysaccharide biosynthesis protein
FOC80_04975	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
FOC80_04980	COG0482	sulfurtransferase activity
FOC80_05000	COG0110	maltose O-acetyltransferase activity
FOC80_05045	COG0859	PFAM glycosyl transferase family 9
FOC80_05060	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
FOC80_05070	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
FOC80_05095	COG1686	Belongs to the peptidase S11 family
FOC80_05110	COG0321	lipoyl(octanoyl) transferase activity
FOC80_05130	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
FOC80_05155	COG2096	Adenosyltransferase
FOC80_05165	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
FOC80_05170	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
FOC80_05180	COG0523	cobalamin synthesis protein
FOC80_05185	COG0735	belongs to the Fur family
FOC80_05210	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
FOC80_05215	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
FOC80_05225	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
FOC80_05230	COG1560	Kdo2-lipid A biosynthetic process
FOC80_05240	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
FOC80_05245	COG0154	amidase activity
FOC80_05250	COG0477	Major facilitator Superfamily
FOC80_05260	COG0583	DNA-binding transcription factor activity
FOC80_05265	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_05275	COG0066	3-isopropylmalate dehydratase activity
FOC80_05280	COG0596	Alpha beta hydrolase
FOC80_05290	COG0438	transferase activity, transferring glycosyl groups
FOC80_05295	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
FOC80_05300	COG1950	PFAM Membrane protein of
FOC80_05315	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC80_05320	COG2301	Belongs to the HpcH HpaI aldolase family
FOC80_05345	COG1305	Transglutaminase-like
FOC80_05355	COG2308	Evidence 4 Homologs of previously reported genes of
FOC80_05360	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
FOC80_05400	COG0513	Belongs to the DEAD box helicase family
FOC80_05405	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
FOC80_05410	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
FOC80_05415	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_05420	COG3189	MarR family transcriptional regulator
FOC80_05450	COG0640	Transcriptional regulator
FOC80_05470	COG0730	response to heat
FOC80_05515	COG1846	Transcriptional regulator
FOC80_05520	COG1764	response to oxidative stress
FOC80_05545	COG0583	DNA-binding transcription factor activity
FOC80_05555	COG0583	DNA-binding transcription factor activity
FOC80_05565	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
FOC80_05570	COG1280	lysine exporter protein (LysE YggA)
FOC80_05580	COG0708	Exodeoxyribonuclease III
FOC80_05585	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
FOC80_05600	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
FOC80_05605	COG0154	amidase activity
FOC80_05610	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
FOC80_05615	COG1077	Cell shape determining protein MreB Mrl
FOC80_05620	COG1792	Involved in formation and maintenance of cell shape
FOC80_05630	COG0768	penicillin binding
FOC80_05635	COG0772	Belongs to the SEDS family
FOC80_05640	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
FOC80_05645	COG0471	metal ion transport
FOC80_05650	COG1309	transcriptional regulator
FOC80_05660	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
FOC80_05670	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FOC80_05675	COG2823	Periplasmic or secreted lipoprotein
FOC80_05680	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
FOC80_05695	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FOC80_05700	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
FOC80_05705	COG1660	Displays ATPase and GTPase activities
FOC80_05720	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC80_05725	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
FOC80_05735	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
FOC80_05740	COG1137	ATPase activity
FOC80_05755	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
FOC80_05765	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
FOC80_05775	COG1271	oxidase subunit
FOC80_05780	COG1294	oxidase, subunit
FOC80_05790	COG4988	ABC transporter
FOC80_05795	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
FOC80_05815	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FOC80_05820	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FOC80_05825	COG1238	metal cluster binding
FOC80_05840	COG0071	Belongs to the small heat shock protein (HSP20) family
FOC80_05850	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
FOC80_05855	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC80_05860	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC80_05875	COG0758	DNA mediated transformation
FOC80_05880	COG0242	peptide deformylase activity
FOC80_05885	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
FOC80_05900	COG0546	phosphoglycolate phosphatase activity
FOC80_05920	COG1733	regulation of RNA biosynthetic process
FOC80_05930	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
FOC80_05950	COG0840	transmembrane signaling receptor activity
FOC80_05975	COG1280	lysine exporter protein (LysE YggA)
FOC80_05980	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
FOC80_05990	COG5000	phosphorelay sensor kinase activity
FOC80_05995	COG2204	response regulator
FOC80_06000	COG0569	domain protein
FOC80_06005	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
FOC80_06010	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
FOC80_06015	COG2226	methyltransferase
FOC80_06020	COG1040	competence protein
FOC80_06025	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
FOC80_06040	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
FOC80_06045	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
FOC80_06050	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
FOC80_06060	COG0588	phosphoglycerate mutase activity
FOC80_06065	COG4942	peptidase
FOC80_06070	COG0793	Belongs to the peptidase S41A family
FOC80_06075	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
FOC80_06100	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FOC80_06115	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
FOC80_06120	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
FOC80_06125	COG0211	Belongs to the bacterial ribosomal protein bL27 family
FOC80_06130	COG0261	This protein binds to 23S rRNA in the presence of protein L20
FOC80_06135	COG0142	geranyltranstransferase activity
FOC80_06145	COG0179	Fumarylacetoacetate (FAA) hydrolase
FOC80_06155	COG2188	Transcriptional regulator
FOC80_06160	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC80_06165	COG1024	Enoyl-CoA hydratase
FOC80_06170	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
FOC80_06190	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_06210	COG1846	Transcriptional regulator
FOC80_06215	COG1024	Enoyl-CoA hydratase
FOC80_06220	COG0446	pyridine nucleotide-disulphide oxidoreductase
FOC80_06220	COG1902	pentaerythritol trinitrate reductase activity
FOC80_06225	COG1024	Enoyl-CoA hydratase
FOC80_06230	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_06235	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC80_06240	COG1960	acyl-CoA dehydrogenase activity
FOC80_06260	COG0604	alcohol dehydrogenase
FOC80_06270	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC80_06285	COG4585	Histidine kinase
FOC80_06305	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_06315	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
FOC80_06320	COG1802	Transcriptional regulator
FOC80_06325	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
FOC80_06330	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
FOC80_06335	COG1335	isochorismatase
FOC80_06340	COG0523	cobalamin synthesis protein
FOC80_06355	COG2188	Transcriptional regulator
FOC80_06380	COG0683	leucine binding
FOC80_06385	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FOC80_06390	COG2084	Dehydrogenase
FOC80_06400	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
FOC80_06420	COG0235	Class ii aldolase
FOC80_06425	COG2271	Major facilitator Superfamily
FOC80_06430	COG3622	Belongs to the hyi family
FOC80_06435	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FOC80_06440	COG2084	Dehydrogenase
FOC80_06445	COG3395	kinase activity
FOC80_06450	COG2186	Transcriptional regulator
FOC80_06480	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_06485	COG0022	dehydrogenase e1 component
FOC80_06500	COG0508	dehydrogenase complex catalyzes the overall conversion of
FOC80_06510	COG0583	DNA-binding transcription factor activity
FOC80_06520	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
FOC80_06545	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC80_06550	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
FOC80_06555	COG3622	Belongs to the hyi family
FOC80_06560	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_06570	COG5006	permease, DMT superfamily
FOC80_06580	COG1522	sequence-specific DNA binding
FOC80_06595	COG1473	amidohydrolase
FOC80_06610	COG1595	DNA-templated transcription, initiation
FOC80_06615	COG2217	Heavy metal translocating P-type atpase
FOC80_06630	COG1132	(ABC) transporter
FOC80_06655	COG3264	Mechanosensitive ion channel
FOC80_06655	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
FOC80_06670	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
FOC80_06675	COG2890	protein-(glutamine-N5) methyltransferase activity
FOC80_06680	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
FOC80_06700	COG0318	PFAM AMP-dependent synthetase and ligase
FOC80_06730	COG0583	DNA-binding transcription factor activity
FOC80_06745	COG0625	glutathione transferase activity
FOC80_06760	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_06780	COG0559	Belongs to the binding-protein-dependent transport system permease family
FOC80_06790	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_06795	COG1802	Transcriptional regulator
FOC80_06800	COG0288	reversible hydration of carbon dioxide
FOC80_06820	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
FOC80_06830	COG4829	muconolactone delta-isomerase
FOC80_06835	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
FOC80_06845	COG1414	Transcriptional regulator
FOC80_06850	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_06855	COG2031	fatty acid transporter
FOC80_06860	COG1250	3-hydroxyacyl-CoA dehydrogenase
FOC80_06865	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
FOC80_06870	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
FOC80_06885	COG0583	DNA-binding transcription factor activity
FOC80_06890	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
FOC80_06900	COG0129	dihydroxy-acid dehydratase activity
FOC80_06905	COG0583	DNA-binding transcription factor activity
FOC80_06910	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FOC80_06915	COG0508	dehydrogenase complex catalyzes the overall conversion of
FOC80_06925	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
FOC80_06930	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_06960	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
FOC80_06970	COG2186	Transcriptional regulator
FOC80_06980	COG4502	5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)
FOC80_06995	COG2177	Part of the ABC transporter FtsEX involved in
FOC80_07000	COG2884	Cell division ATP-binding protein ftsE
FOC80_07005	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC80_07010	COG4597	amino acid ABC transporter
FOC80_07015	COG0765	amino acid transport
FOC80_07020	COG1126	abc transporter atp-binding protein
FOC80_07035	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC80_07055	COG1414	Transcriptional regulator
FOC80_07060	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
FOC80_07065	COG1960	acyl-CoA dehydrogenase activity
FOC80_07080	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_07085	COG0583	DNA-binding transcription factor activity
FOC80_07095	COG1024	Enoyl-CoA hydratase
FOC80_07120	COG1129	ABC transporter
FOC80_07125	COG4177	L-phenylalanine transmembrane transporter activity
FOC80_07140	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FOC80_07145	COG2081	HI0933 family
FOC80_07155	COG0077	Prephenate dehydratase
FOC80_07155	COG1605	Chorismate mutase
FOC80_07205	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FOC80_07210	COG0583	DNA-binding transcription factor activity
FOC80_07215	COG0628	permease
FOC80_07220	COG5285	phytanoyl-CoA dioxygenase
FOC80_07235	COG1176	ABC-type spermidine putrescine transport system, permease component I
FOC80_07240	COG3842	ATPase activity
FOC80_07250	COG0277	FAD linked oxidase domain protein
FOC80_07265	COG0477	Major facilitator Superfamily
FOC80_07280	COG1695	Transcriptional regulator
FOC80_07315	COG2197	response regulator
FOC80_07320	COG5002	protein histidine kinase activity
FOC80_07360	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_07370	COG3246	L-lysine catabolic process to acetate
FOC80_07375	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
FOC80_07380	COG1172	Belongs to the binding-protein-dependent transport system permease family
FOC80_07385	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
FOC80_07395	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FOC80_07405	COG0583	DNA-binding transcription factor activity
FOC80_07410	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FOC80_07435	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC80_07455	COG1595	DNA-templated transcription, initiation
FOC80_07465	COG4774	siderophore transport
FOC80_07475	COG1802	Transcriptional regulator
FOC80_07485	COG0765	amino acid transport
FOC80_07490	COG1126	abc transporter atp-binding protein
FOC80_07495	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC80_07500	COG2721	sulfolactate sulfo-lyase activity
FOC80_07515	COG4221	oxidoreductase activity
FOC80_07520	COG0583	DNA-binding transcription factor activity
FOC80_07575	COG2233	PERMEase
FOC80_07580	COG0326	Molecular chaperone. Has ATPase activity
FOC80_07590	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_07605	COG0604	alcohol dehydrogenase
FOC80_07615	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_07640	COG2814	Major facilitator Superfamily
FOC80_07650	COG1473	amidohydrolase
FOC80_07655	COG2271	Major facilitator Superfamily
FOC80_07660	COG4948	Mandelate Racemase Muconate Lactonizing
FOC80_07665	COG0800	Aldolase
FOC80_07670	COG3734	2-keto-3-deoxy-galactonokinase
FOC80_07675	COG1414	Transcriptional regulator
FOC80_07680	COG0625	glutathione transferase activity
FOC80_07695	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FOC80_07700	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
FOC80_07705	COG1652	LysM domain
FOC80_07725	COG0220	tRNA (guanine-N7-)-methyltransferase activity
FOC80_07735	COG1349	DNA-binding transcription factor activity
FOC80_07740	COG4608	Belongs to the ABC transporter superfamily
FOC80_07745	COG4172	Belongs to the ABC transporter superfamily
FOC80_07750	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOC80_07755	COG0601	transmembrane transport
FOC80_07760	COG0747	negative chemotaxis
FOC80_07780	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
FOC80_07790	COG1234	tRNA 3'-trailer cleavage
FOC80_07800	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FOC80_07805	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOC80_07815	COG0387	Pfam Sodium calcium exchanger
FOC80_07825	COG1595	DNA-templated transcription, initiation
FOC80_07830	COG3712	iron ion homeostasis
FOC80_07835	COG4774	siderophore transport
FOC80_07840	COG1595	DNA-templated transcription, initiation
FOC80_07845	COG4774	siderophore transport
FOC80_07850	COG0583	DNA-binding transcription factor activity
FOC80_07860	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_07865	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC80_07880	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC80_07895	COG1309	transcriptional regulator
FOC80_07915	COG1960	acyl-CoA dehydrogenase activity
FOC80_07920	COG0318	PFAM AMP-dependent synthetase and ligase
FOC80_07925	COG0583	DNA-binding transcription factor activity
FOC80_07930	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
FOC80_07935	COG2079	MmgE PrpD family protein
FOC80_07945	COG0583	DNA-binding transcription factor activity
FOC80_07960	COG1522	sequence-specific DNA binding
FOC80_07970	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
FOC80_07980	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FOC80_07985	COG0006	proline dipeptidase activity
FOC80_08000	COG1982	Orn Lys Arg decarboxylase major
FOC80_08010	COG0688	phosphatidylethanolamine metabolic process
FOC80_08015	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
FOC80_08045	COG0518	GMP synthase (glutamine-hydrolyzing) activity
FOC80_08045	COG0519	Catalyzes the synthesis of GMP from XMP
FOC80_08050	COG1802	Transcriptional regulator
FOC80_08055	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_08065	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FOC80_08075	COG0583	DNA-binding transcription factor activity
FOC80_08080	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
FOC80_08095	COG3135	benzoate transporter
FOC80_08100	COG0583	DNA-binding transcription factor activity
FOC80_08105	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
FOC80_08115	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
FOC80_08125	COG0625	glutathione transferase activity
FOC80_08140	COG2986	histidine ammonia-lyase
FOC80_08145	COG0165	Argininosuccinate lyase
FOC80_08165	COG0583	DNA-binding transcription factor activity
FOC80_08195	COG3284	Transcriptional regulator
FOC80_08200	COG0583	DNA-binding transcription factor activity
FOC80_08210	COG0583	DNA-binding transcription factor activity
FOC80_08220	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
FOC80_08225	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
FOC80_08235	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
FOC80_08250	COG0625	glutathione transferase activity
FOC80_08260	COG3976	FMN-binding domain protein
FOC80_08260	COG1053	succinate dehydrogenase
FOC80_08280	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC80_08290	COG1294	oxidase, subunit
FOC80_08295	COG1271	oxidase subunit
FOC80_08300	COG0697	spore germination
FOC80_08315	COG0842	Transport permease protein
FOC80_08320	COG0842	Transport permease protein
FOC80_08320	COG1129	ABC transporter
FOC80_08325	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FOC80_08340	COG2200	EAL domain
FOC80_08345	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
FOC80_08350	COG0745	RESPONSE REGULATOR receiver
FOC80_08380	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FOC80_08380	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FOC80_08390	COG0489	protein tyrosine kinase activity
FOC80_08405	COG0717	Belongs to the dCTP deaminase family
FOC80_08415	COG2199	diguanylate cyclase activity
FOC80_08420	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOC80_08420	COG0456	acetyltransferase
FOC80_08430	COG1982	Orn Lys Arg decarboxylase major
FOC80_08435	COG2081	HI0933 family
FOC80_08450	COG0404	The glycine cleavage system catalyzes the degradation of glycine
FOC80_08455	COG0509	glycine decarboxylation via glycine cleavage system
FOC80_08460	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
FOC80_08460	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
FOC80_08475	COG0154	amidase activity
FOC80_08480	COG4172	Belongs to the ABC transporter superfamily
FOC80_08485	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOC80_08490	COG0601	transmembrane transport
FOC80_08515	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC80_08540	COG2941	Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol
FOC80_08545	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
FOC80_08550	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
FOC80_08565	COG0438	transferase activity, transferring glycosyl groups
FOC80_08575	COG0438	transferase activity, transferring glycosyl groups
FOC80_08580	COG0438	transferase activity, transferring glycosyl groups
FOC80_08590	COG0166	Belongs to the GPI family
FOC80_08605	COG0277	FAD linked oxidase domain protein
FOC80_08610	COG0745	RESPONSE REGULATOR receiver
FOC80_08615	COG2205	protein histidine kinase activity
FOC80_08625	COG2186	Transcriptional regulator
FOC80_08630	COG1368	sulfuric ester hydrolase activity
FOC80_08675	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
FOC80_08685	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
FOC80_08690	COG0840	transmembrane signaling receptor activity
FOC80_08695	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
FOC80_08715	COG0193	aminoacyl-tRNA hydrolase activity
FOC80_08725	COG0012	GTP binding
FOC80_08750	COG0477	Major facilitator Superfamily
FOC80_08765	COG3135	benzoate transporter
FOC80_08770	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
FOC80_08775	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
FOC80_08780	COG0742	ribosomal rna small subunit methyltransferase
FOC80_08800	COG3639	organic phosphonate transmembrane transporter activity
FOC80_08805	COG3639	organic phosphonate transmembrane transporter activity
FOC80_08810	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
FOC80_08835	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
FOC80_08840	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
FOC80_08855	COG1546	Belongs to the CinA family
FOC80_08860	COG0284	orotidine-5'-phosphate decarboxylase activity
FOC80_08865	COG1252	NADH dehydrogenase
FOC80_08870	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
FOC80_08875	COG0246	Mannitol dehydrogenase
FOC80_08885	COG1917	Cupin 2, conserved barrel domain protein
FOC80_08905	COG1846	Transcriptional regulator
FOC80_08915	COG0459	protein refolding
FOC80_08920	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
FOC80_08950	COG0765	amino acid transport
FOC80_08955	COG0765	amino acid transport
FOC80_08960	COG1126	abc transporter atp-binding protein
FOC80_08975	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
FOC80_08995	COG0446	pyridine nucleotide-disulphide oxidoreductase
FOC80_08995	COG1902	pentaerythritol trinitrate reductase activity
FOC80_09000	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_09005	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_09010	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
FOC80_09015	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_09020	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOC80_09045	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_09050	COG0583	DNA-binding transcription factor activity
FOC80_09160	COG3501	Rhs element vgr protein
FOC80_09220	COG3501	Rhs element vgr protein
FOC80_09275	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOC80_09280	COG0601	transmembrane transport
FOC80_09285	COG0747	negative chemotaxis
FOC80_09305	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_09310	COG0583	DNA-binding transcription factor activity
FOC80_09340	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
FOC80_09350	COG1053	succinate dehydrogenase
FOC80_09370	COG1960	acyl-CoA dehydrogenase activity
FOC80_09375	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FOC80_09440	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
FOC80_09445	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_09455	COG4774	siderophore transport
FOC80_09460	COG3712	iron ion homeostasis
FOC80_09465	COG1595	DNA-templated transcription, initiation
FOC80_09475	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_09500	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
FOC80_09510	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC80_09520	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_09525	COG1024	Enoyl-CoA hydratase
FOC80_09530	COG1024	Enoyl-CoA hydratase
FOC80_09550	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_09590	COG0583	DNA-binding transcription factor activity
FOC80_09610	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
FOC80_09615	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
FOC80_09620	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
FOC80_09635	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_09640	COG3246	L-lysine catabolic process to acetate
FOC80_09660	COG2814	Major facilitator Superfamily
FOC80_09665	COG0583	DNA-binding transcription factor activity
FOC80_09685	COG0583	DNA-binding transcription factor activity
FOC80_09700	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FOC80_09705	COG1902	pentaerythritol trinitrate reductase activity
FOC80_09730	COG0559	Belongs to the binding-protein-dependent transport system permease family
FOC80_09760	COG0133	tryptophan synthase activity
FOC80_09770	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FOC80_09775	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FOC80_09785	COG0765	amino acid transport
FOC80_09805	COG1024	Enoyl-CoA hydratase
FOC80_09825	COG0444	Belongs to the ABC transporter superfamily
FOC80_09835	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOC80_09845	COG1024	Enoyl-CoA hydratase
FOC80_09875	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_09880	COG1802	Transcriptional regulator
FOC80_09900	COG1280	lysine exporter protein (LysE YggA)
FOC80_09915	COG0165	Argininosuccinate lyase
FOC80_09925	COG1960	acyl-CoA dehydrogenase activity
FOC80_09930	COG1960	acyl-CoA dehydrogenase activity
FOC80_09935	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
FOC80_09945	COG2030	dehydratase
FOC80_09950	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_09955	COG0183	Belongs to the thiolase family
FOC80_09965	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_09975	COG1024	Enoyl-CoA hydratase
FOC80_09990	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_09995	COG0183	Belongs to the thiolase family
FOC80_10000	COG1024	Enoyl-CoA hydratase
FOC80_10000	COG1250	3-hydroxyacyl-CoA dehydrogenase
FOC80_10010	COG1960	acyl-CoA dehydrogenase activity
FOC80_10025	COG0318	PFAM AMP-dependent synthetase and ligase
FOC80_10040	COG2188	Transcriptional regulator
FOC80_10045	COG0730	response to heat
FOC80_10075	COG2837	iron assimilation
FOC80_10080	COG1960	acyl-CoA dehydrogenase activity
FOC80_10085	COG0318	PFAM AMP-dependent synthetase and ligase
FOC80_10090	COG1024	Enoyl-CoA hydratase
FOC80_10095	COG1024	Enoyl-CoA hydratase
FOC80_10100	COG3850	Histidine kinase
FOC80_10115	COG4773	Receptor
FOC80_10125	COG0667	Aldo Keto reductase
FOC80_10130	COG3795	YCII-related domain
FOC80_10150	COG2818	Glycosylase
FOC80_10165	COG0590	tRNA wobble adenosine to inosine editing
FOC80_10170	COG2814	Major facilitator Superfamily
FOC80_10175	COG2207	Transcriptional regulator
FOC80_10180	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FOC80_10190	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
FOC80_10195	COG1845	cytochrome c oxidase, subunit III
FOC80_10200	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
FOC80_10205	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
FOC80_10210	COG0477	Major facilitator Superfamily
FOC80_10215	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC80_10220	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
FOC80_10255	COG0583	DNA-binding transcription factor activity
FOC80_10260	COG0861	Integral membrane protein TerC family
FOC80_10265	COG4106	trans-aconitate 2-methyltransferase activity
FOC80_10270	COG2207	Transcriptional regulator
FOC80_10275	COG2807	transmembrane transport
FOC80_10295	COG0330	HflC and HflK could
FOC80_10305	COG1595	DNA-templated transcription, initiation
FOC80_10310	COG3712	iron ion homeostasis
FOC80_10320	COG2706	6-phosphogluconolactonase activity
FOC80_10330	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
FOC80_10340	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FOC80_10345	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_10350	COG1285	pathogenesis
FOC80_10355	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_10375	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FOC80_10380	COG1396	sequence-specific DNA binding
FOC80_10385	COG0456	acetyltransferase
FOC80_10425	COG0697	spore germination
FOC80_10450	COG0280	phosphate acetyltransferase
FOC80_10450	COG0281	malic enzyme
FOC80_10475	COG4772	TonB-dependent receptor
FOC80_10490	COG1845	cytochrome c oxidase, subunit III
FOC80_10495	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
FOC80_10505	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
FOC80_10525	COG1999	signal sequence binding
FOC80_10570	COG4771	TonB-dependent receptor
FOC80_10585	COG0765	amino acid transport
FOC80_10590	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC80_10595	COG3191	aminopeptidase activity
FOC80_10600	COG1272	protein, Hemolysin III
FOC80_10605	COG1522	sequence-specific DNA binding
FOC80_10620	COG2378	regulation of single-species biofilm formation
FOC80_10635	COG1595	DNA-templated transcription, initiation
FOC80_10640	COG3712	iron ion homeostasis
FOC80_10650	COG3720	iron ion transport
FOC80_10655	COG4558	Periplasmic binding protein
FOC80_10660	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOC80_10670	COG1666	GTP binding
FOC80_10680	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
FOC80_10700	COG0671	phosphoesterase, PA-phosphatase related
FOC80_10780	COG0456	acetyltransferase
FOC80_10785	COG1943	Transposase
FOC80_10800	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_10820	COG0745	RESPONSE REGULATOR receiver
FOC80_10825	COG2205	protein histidine kinase activity
FOC80_10840	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
FOC80_10845	COG0583	DNA-binding transcription factor activity
FOC80_10870	COG2223	nitrite transmembrane transporter activity
FOC80_10880	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
FOC80_10885	COG3383	formate dehydrogenase (NAD+) activity
FOC80_10895	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
FOC80_10905	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
FOC80_10910	COG0746	molybdenum cofactor guanylyltransferase activity
FOC80_10915	COG0303	'Molybdopterin
FOC80_10920	COG0521	Mo-molybdopterin cofactor biosynthetic process
FOC80_10935	COG0315	cyclic pyranopterin monophosphate synthase activity
FOC80_10945	COG0412	Dienelactone hydrolase
FOC80_10955	COG0678	peroxiredoxin activity
FOC80_10965	COG0697	spore germination
FOC80_10970	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
FOC80_11010	COG0667	Aldo Keto reductase
FOC80_11015	COG0815	Transfers the fatty acyl group on membrane lipoproteins
FOC80_11020	COG4535	Mg2 and Co2 transporter CorC
FOC80_11025	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
FOC80_11030	COG1702	phosphate starvation-inducible protein PhoH
FOC80_11035	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
FOC80_11045	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
FOC80_11055	COG0740	serine-type endopeptidase activity
FOC80_11065	COG0640	Transcriptional regulator
FOC80_11070	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FOC80_11075	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FOC80_11080	COG1862	Preprotein translocase
FOC80_11085	COG0343	queuine tRNA-ribosyltransferase activity
FOC80_11090	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
FOC80_11105	COG2027	D-alanyl-D-alanine carboxypeptidase
FOC80_11110	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
FOC80_11125	COG4575	ribosome binding
FOC80_11140	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
FOC80_11145	COG0741	lytic transglycosylase activity
FOC80_11160	COG0280	phosphate acetyltransferase
FOC80_11160	COG0281	malic enzyme
FOC80_11170	COG2732	(Barnase) inhibitor
FOC80_11175	COG1385	rRNA (uridine-N3-)-methyltransferase activity
FOC80_11180	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
FOC80_11185	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
FOC80_11190	COG0126	phosphoglycerate kinase activity
FOC80_11205	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
FOC80_11210	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
FOC80_11230	COG0625	glutathione transferase activity
FOC80_11270	COG0306	phosphate transporter
FOC80_11280	COG0521	Mo-molybdopterin cofactor biosynthetic process
FOC80_11290	COG0739	heme binding
FOC80_11300	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
FOC80_11320	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
FOC80_11325	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
FOC80_11330	COG3639	organic phosphonate transmembrane transporter activity
FOC80_11345	COG0405	Gamma-glutamyltransferase
FOC80_11350	COG0583	DNA-binding transcription factor activity
FOC80_11355	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
FOC80_11360	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
FOC80_11365	COG3454	Phosphonate metabolism
FOC80_11370	COG2188	Transcriptional regulator
FOC80_11375	COG3624	Phosphonate C-P lyase system protein PhnG
FOC80_11385	COG3626	phosphonate metabolism
FOC80_11390	COG3627	carbon phosphorus lyase activity
FOC80_11395	COG4107	phosphonate C-P lyase system protein PhnK
FOC80_11400	COG4778	phosphonate C-P lyase system protein PhnL
FOC80_11405	COG3454	Phosphonate metabolism
FOC80_11445	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
FOC80_11455	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
FOC80_11460	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
FOC80_11465	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
FOC80_11470	COG0009	L-threonylcarbamoyladenylate synthase
FOC80_11475	COG1414	Transcriptional regulator
FOC80_11480	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
FOC80_11495	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC80_11515	COG0318	PFAM AMP-dependent synthetase and ligase
FOC80_11525	COG0028	Belongs to the TPP enzyme family
FOC80_11530	COG0583	DNA-binding transcription factor activity
FOC80_11545	COG1176	ABC-type spermidine putrescine transport system, permease component I
FOC80_11550	COG2011	ABC-type metal ion transport system permease component
FOC80_11555	COG3842	ATPase activity
FOC80_11600	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
FOC80_11620	COG2030	dehydratase
FOC80_11635	COG1960	acyl-CoA dehydrogenase activity
FOC80_11640	COG0028	Belongs to the TPP enzyme family
FOC80_11645	COG0583	DNA-binding transcription factor activity
FOC80_11650	COG4974	Belongs to the 'phage' integrase family
FOC80_11675	COG1686	Belongs to the peptidase S11 family
FOC80_11695	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FOC80_11720	COG1074	ATP-dependent DNA helicase activity
FOC80_11730	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
FOC80_11745	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC80_11750	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FOC80_11760	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FOC80_11770	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
FOC80_11775	COG0505	Belongs to the CarA family
FOC80_11780	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
FOC80_11785	COG4221	oxidoreductase activity
FOC80_11790	COG0406	alpha-ribazole phosphatase activity
FOC80_11800	COG3842	ATPase activity
FOC80_11820	COG2233	PERMEase
FOC80_11825	COG0840	transmembrane signaling receptor activity
FOC80_11830	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FOC80_11835	COG1534	Rna-binding protein
FOC80_11840	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
FOC80_11845	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
FOC80_11855	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
FOC80_11890	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
FOC80_11930	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_11935	COG1802	Transcriptional regulator
FOC80_11950	COG0179	Fumarylacetoacetate (FAA) hydrolase
FOC80_11955	COG1802	Transcriptional regulator
FOC80_11985	COG1414	Transcriptional regulator
FOC80_12010	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
FOC80_12025	COG0840	transmembrane signaling receptor activity
FOC80_12040	COG2841	Protein conserved in bacteria
FOC80_12050	COG1335	isochorismatase
FOC80_12055	COG1335	isochorismatase
FOC80_12060	COG0583	DNA-binding transcription factor activity
FOC80_12070	COG1609	Transcriptional regulator
FOC80_12075	COG3608	succinylglutamate desuccinylase aspartoacylase
FOC80_12080	COG0251	oxidation-reduction process
FOC80_12085	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC80_12110	COG2207	Transcriptional regulator
FOC80_12115	COG0667	Aldo Keto reductase
FOC80_12130	COG0500	methyltransferase
FOC80_12135	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_12140	COG0604	alcohol dehydrogenase
FOC80_12140	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_12140	COG3321	synthase
FOC80_12155	COG0559	Belongs to the binding-protein-dependent transport system permease family
FOC80_12165	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_12170	COG1250	3-hydroxyacyl-CoA dehydrogenase
FOC80_12175	COG3246	L-lysine catabolic process to acetate
FOC80_12180	COG0371	Dehydrogenase
FOC80_12185	COG1802	Transcriptional regulator
FOC80_12190	COG3959	Transketolase, thiamine diphosphate binding domain
FOC80_12195	COG3958	Transketolase
FOC80_12200	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
FOC80_12210	COG3938	Belongs to the proline racemase family
FOC80_12215	COG1177	transmembrane transport
FOC80_12220	COG1176	ABC-type spermidine putrescine transport system, permease component I
FOC80_12225	COG3842	ATPase activity
FOC80_12230	COG1840	ABC-type Fe3 transport system, periplasmic component
FOC80_12275	COG1511	domain protein
FOC80_12275	COG3264	Mechanosensitive ion channel
FOC80_12280	COG0583	DNA-binding transcription factor activity
FOC80_12285	COG0427	acetyl-CoA hydrolase
FOC80_12290	COG0583	DNA-binding transcription factor activity
FOC80_12335	COG0583	DNA-binding transcription factor activity
FOC80_12350	COG1250	3-hydroxyacyl-CoA dehydrogenase
FOC80_12360	COG0477	Major facilitator Superfamily
FOC80_12370	COG0154	amidase activity
FOC80_12385	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
FOC80_12400	COG0495	leucyl-tRNA aminoacylation
FOC80_12405	COG2814	Major facilitator Superfamily
FOC80_12410	COG1846	Transcriptional regulator
FOC80_12420	COG1686	Belongs to the peptidase S11 family
FOC80_12455	COG0267	Belongs to the bacterial ribosomal protein bL33 family
FOC80_12460	COG0227	Belongs to the bacterial ribosomal protein bL28 family
FOC80_12465	COG2814	Major facilitator Superfamily
FOC80_12470	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
FOC80_12480	COG4176	ABC-type proline glycine betaine transport system permease component
FOC80_12490	COG1942	4-Oxalocrotonate Tautomerase
FOC80_12505	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC80_12510	COG0583	DNA-binding transcription factor activity
FOC80_12540	COG2030	dehydratase
FOC80_12555	COG1960	acyl-CoA dehydrogenase activity
FOC80_12560	COG0318	PFAM AMP-dependent synthetase and ligase
FOC80_12565	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FOC80_12580	COG0439	Biotin carboxylase
FOC80_12605	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FOC80_12615	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOC80_12620	COG0601	transmembrane transport
FOC80_12630	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
FOC80_12635	COG1984	allophanate hydrolase subunit 2
FOC80_12640	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
FOC80_12645	COG0436	Aminotransferase
FOC80_12655	COG0330	HflC and HflK could
FOC80_12670	COG1595	DNA-templated transcription, initiation
FOC80_12675	COG3712	iron ion homeostasis
FOC80_12680	COG4774	siderophore transport
FOC80_12725	COG1024	Enoyl-CoA hydratase
FOC80_12730	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_12735	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_12740	COG0583	DNA-binding transcription factor activity
FOC80_12745	COG1960	acyl-CoA dehydrogenase activity
FOC80_12755	COG0183	Belongs to the thiolase family
FOC80_12760	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC80_12765	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FOC80_12770	COG3608	succinylglutamate desuccinylase aspartoacylase
FOC80_12780	COG2814	Major facilitator Superfamily
FOC80_12790	COG0633	Ferredoxin
FOC80_12810	COG3706	GGDEF domain
FOC80_12810	COG5001	Diguanylate cyclase
FOC80_12810	COG2203	Gaf domain
FOC80_12810	COG4251	negative regulation of phosphorylation
FOC80_12840	COG0038	chloride channel
FOC80_12845	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
FOC80_12860	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_12870	COG0235	Class ii aldolase
FOC80_12875	COG1396	sequence-specific DNA binding
FOC80_12895	COG1012	belongs to the aldehyde dehydrogenase family
FOC80_12915	COG0765	amino acid transport
FOC80_12920	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FOC80_12935	COG3468	outer membrane autotransporter barrel domain protein
FOC80_12945	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC80_12960	COG0436	Aminotransferase
FOC80_12985	COG1137	ATPase activity
FOC80_12995	COG1802	Transcriptional regulator
FOC80_13005	COG1984	allophanate hydrolase subunit 2
FOC80_13010	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
FOC80_13015	COG0511	ligase activity, forming carbon-carbon bonds
FOC80_13020	COG0439	Biotin carboxylase
FOC80_13035	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
FOC80_13050	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FOC80_13120	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
FOC80_13135	COG0166	Belongs to the GPI family
FOC80_13140	COG1210	Utp--glucose-1-phosphate uridylyltransferase
FOC80_13145	COG0668	transmembrane transport
FOC80_13165	COG1546	Belongs to the CinA family
FOC80_13165	COG1058	Belongs to the CinA family
FOC80_13180	COG0247	lactate metabolic process
FOC80_13190	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_13195	COG0028	Belongs to the TPP enzyme family
FOC80_13200	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_13210	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_13255	COG1802	Transcriptional regulator
FOC80_13275	COG2084	Dehydrogenase
FOC80_13285	COG0183	Belongs to the thiolase family
FOC80_13295	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
FOC80_13300	COG1960	acyl-CoA dehydrogenase activity
FOC80_13330	COG1024	Enoyl-CoA hydratase
FOC80_13355	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FOC80_13420	COG1278	Cold shock
FOC80_13525	COG0740	serine-type endopeptidase activity
FOC80_13670	COG0784	Response regulator, receiver
FOC80_13670	COG4191	Histidine kinase
FOC80_13695	COG0583	DNA-binding transcription factor activity
FOC80_13700	COG3618	amidohydrolase
FOC80_13705	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC80_13725	COG2084	Dehydrogenase
FOC80_13730	COG1304	FMN binding
FOC80_13740	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC80_13740	COG2205	protein histidine kinase activity
FOC80_13745	COG2203	Gaf domain
FOC80_13745	COG3706	GGDEF domain
FOC80_13745	COG5001	Diguanylate cyclase
FOC80_13745	COG4251	negative regulation of phosphorylation
FOC80_13760	COG3468	outer membrane autotransporter barrel domain protein
FOC80_13770	COG2197	response regulator
FOC80_13775	COG5002	protein histidine kinase activity
FOC80_13775	COG2205	protein histidine kinase activity
FOC80_13775	COG0784	Response regulator, receiver
FOC80_13800	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_13810	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
FOC80_13835	COG0583	DNA-binding transcription factor activity
FOC80_13850	COG3863	Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
FOC80_13865	COG2808	Putative FMN-binding domain
FOC80_13895	COG2321	neutral zinc metallopeptidase
FOC80_13900	COG0009	L-threonylcarbamoyladenylate synthase
FOC80_13905	COG1994	Peptidase M50
FOC80_13910	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FOC80_13915	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
FOC80_13925	COG2850	peptidyl-arginine hydroxylation
FOC80_13930	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
FOC80_13950	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_13955	COG0583	DNA-binding transcription factor activity
FOC80_13980	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_13995	COG3360	Dodecin
FOC80_14010	COG1802	Transcriptional regulator
FOC80_14035	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FOC80_14055	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FOC80_14095	COG0668	transmembrane transport
FOC80_14130	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
FOC80_14145	COG4263	nitrous-oxide reductase activity
FOC80_14160	COG1253	flavin adenine dinucleotide binding
FOC80_14165	COG1968	undecaprenyl-diphosphatase activity
FOC80_14170	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FOC80_14185	COG0215	cysteine-tRNA ligase activity
FOC80_14195	COG0825	malonyl-CoA metabolic process
FOC80_14205	COG0527	aspartate kinase activity
FOC80_14225	COG2603	Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA
FOC80_14250	COG1414	Transcriptional regulator
FOC80_14295	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
FOC80_14305	COG1414	Transcriptional regulator
FOC80_14310	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_14325	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
FOC80_14330	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
FOC80_14335	COG0318	PFAM AMP-dependent synthetase and ligase
FOC80_14345	COG0179	Fumarylacetoacetate (FAA) hydrolase
FOC80_14350	COG2186	Transcriptional regulator
FOC80_14360	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
FOC80_14365	COG3395	kinase activity
FOC80_14375	COG4774	siderophore transport
FOC80_14380	COG0318	PFAM AMP-dependent synthetase and ligase
FOC80_14395	COG0183	Belongs to the thiolase family
FOC80_14400	COG1250	3-hydroxyacyl-CoA dehydrogenase
FOC80_14400	COG1024	Enoyl-CoA hydratase
FOC80_14430	COG2197	response regulator
FOC80_14435	COG2197	response regulator
FOC80_14440	COG0297	glycogen (starch) synthase activity
FOC80_14445	COG0110	maltose O-acetyltransferase activity
FOC80_14450	COG0463	Glycosyl transferase, family 2
FOC80_14475	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FOC80_14480	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
FOC80_14495	COG1051	belongs to the nudix hydrolase family
FOC80_14520	COG0166	Belongs to the GPI family
FOC80_14525	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
FOC80_14530	COG1045	serine acetyltransferase
FOC80_14535	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
FOC80_14550	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
FOC80_14565	COG1309	transcriptional regulator
FOC80_14575	COG0146	N-methylhydantoinase B acetone carboxylase alpha subunit
FOC80_14580	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FOC80_14590	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FOC80_14600	COG0598	Magnesium transport protein CorA
FOC80_14620	COG0601	transmembrane transport
FOC80_14625	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOC80_14630	COG4172	Belongs to the ABC transporter superfamily
FOC80_14640	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
FOC80_14655	COG3384	dioxygenase
FOC80_14660	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
FOC80_14665	COG1802	Transcriptional regulator
FOC80_14715	COG3842	ATPase activity
FOC80_14725	COG0318	PFAM AMP-dependent synthetase and ligase
FOC80_14730	COG0395	ABC-type sugar transport system, permease component
FOC80_14745	COG1012	belongs to the aldehyde dehydrogenase family
FOC80_14750	COG0583	DNA-binding transcription factor activity
FOC80_14780	COG0516	GMP reductase activity
FOC80_14780	COG0517	IMP dehydrogenase activity
FOC80_14820	COG4948	Mandelate Racemase Muconate Lactonizing
FOC80_14830	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC80_14840	COG1960	acyl-CoA dehydrogenase activity
FOC80_14845	COG1024	Enoyl-CoA hydratase
FOC80_14855	COG2197	response regulator
FOC80_14870	COG0517	IMP dehydrogenase activity
FOC80_14870	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
FOC80_14870	COG0617	tRNA 3'-terminal CCA addition
FOC80_14875	COG0589	response to stress
FOC80_14880	COG0589	response to stress
FOC80_14885	COG0071	Belongs to the small heat shock protein (HSP20) family
FOC80_14905	COG0183	Belongs to the thiolase family
FOC80_14915	COG1024	Enoyl-CoA hydratase
FOC80_14930	COG1960	acyl-CoA dehydrogenase activity
FOC80_14945	COG1802	Transcriptional regulator
FOC80_14955	COG1024	Enoyl-CoA hydratase
FOC80_14960	COG0318	PFAM AMP-dependent synthetase and ligase
FOC80_14970	COG0667	Aldo Keto reductase
FOC80_14980	COG4120	Belongs to the binding-protein-dependent transport system permease family
FOC80_14985	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
FOC80_14990	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FOC80_15000	COG4262	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
FOC80_15025	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
FOC80_15030	COG0725	ABC transporter, periplasmic molybdate-binding protein
FOC80_15035	COG4149	molybdate abc transporter
FOC80_15060	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FOC80_15065	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FOC80_15075	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
FOC80_15080	COG0736	holo-[acyl-carrier-protein] synthase activity
FOC80_15095	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
FOC80_15105	COG1858	cytochrome C peroxidase
FOC80_15110	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
FOC80_15110	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
FOC80_15115	COG2224	Isocitrate lyase
FOC80_15125	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_15130	COG2301	Belongs to the HpcH HpaI aldolase family
FOC80_15150	COG4106	trans-aconitate 2-methyltransferase activity
FOC80_15150	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
FOC80_15160	COG0156	8-amino-7-oxononanoate synthase activity
FOC80_15180	COG3278	Belongs to the heme-copper respiratory oxidase family
FOC80_15200	COG0348	domain, Protein
FOC80_15215	COG2824	Alkylphosphonate utilization operon protein PhnA
FOC80_15225	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_15245	COG1131	(ABC) transporter
FOC80_15250	COG0842	Transport permease protein
FOC80_15275	COG1272	protein, Hemolysin III
FOC80_15300	COG2169	Transcriptional regulator
FOC80_15315	COG0251	oxidation-reduction process
FOC80_15325	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
FOC80_15335	COG0583	DNA-binding transcription factor activity
FOC80_15345	COG0861	Integral membrane protein TerC family
FOC80_15365	COG1566	PFAM secretion protein HlyD family protein
FOC80_15380	COG0583	DNA-binding transcription factor activity
FOC80_15395	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC80_15410	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
FOC80_15415	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
FOC80_15425	COG0179	Fumarylacetoacetate (FAA) hydrolase
FOC80_15430	COG0596	Alpha beta hydrolase
FOC80_15435	COG1228	amidohydrolase
FOC80_15460	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
FOC80_15465	COG2011	ABC-type metal ion transport system permease component
FOC80_15500	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_15520	COG1712	Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate
FOC80_15530	COG1473	amidohydrolase
FOC80_15535	COG0477	Major facilitator Superfamily
FOC80_15555	COG2951	lytic endotransglycosylase activity
FOC80_15575	COG0519	Catalyzes the synthesis of GMP from XMP
FOC80_15585	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOC80_15600	COG4172	Belongs to the ABC transporter superfamily
FOC80_15630	COG2963	transposase activity
FOC80_15665	COG0443	Heat shock 70 kDa protein
FOC80_15685	COG1522	sequence-specific DNA binding
FOC80_15710	COG1846	Transcriptional regulator
FOC80_15720	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
FOC80_15730	COG0318	PFAM AMP-dependent synthetase and ligase
FOC80_15760	COG3530	Putative quorum-sensing-regulated virulence factor
FOC80_15790	COG0443	Heat shock 70 kDa protein
FOC80_15795	COG0494	nUDIX hydrolase
FOC80_15825	COG0477	Major facilitator Superfamily
FOC80_15835	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FOC80_15845	COG0542	response to heat
FOC80_15850	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FOC80_15855	COG4172	Belongs to the ABC transporter superfamily
FOC80_15860	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOC80_15870	COG0747	negative chemotaxis
FOC80_15875	COG0235	Class ii aldolase
FOC80_15880	COG1802	Transcriptional regulator
FOC80_15890	COG3485	protocatechuate 3,4-dioxygenase
FOC80_15895	COG1012	belongs to the aldehyde dehydrogenase family
FOC80_15930	COG5441	Belongs to the UPF0261 family
FOC80_15935	COG5564	TIM-barrel signal transduction protein
FOC80_15945	COG0583	DNA-binding transcription factor activity
FOC80_15950	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
FOC80_15965	COG1477	protein flavinylation
FOC80_15990	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
FOC80_16000	COG1562	ergosterol biosynthetic process
FOC80_16010	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
FOC80_16015	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_16020	COG0583	DNA-binding transcription factor activity
FOC80_16025	COG1942	4-Oxalocrotonate Tautomerase
FOC80_16035	COG3971	2-oxopent-4-enoate hydratase activity
FOC80_16045	COG0179	Fumarylacetoacetate (FAA) hydrolase
FOC80_16050	COG1012	belongs to the aldehyde dehydrogenase family
FOC80_16055	COG3384	dioxygenase
FOC80_16085	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FOC80_16090	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_16095	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_16105	COG2186	Transcriptional regulator
FOC80_16135	COG0583	DNA-binding transcription factor activity
FOC80_16140	COG0268	Binds directly to 16S ribosomal RNA
FOC80_16150	COG0728	peptidoglycan biosynthetic process
FOC80_16160	COG0563	adenylate kinase activity
FOC80_16165	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
FOC80_16170	COG2835	tetraacyldisaccharide 4'-kinase activity
FOC80_16180	COG1663	tetraacyldisaccharide 4'-kinase activity
FOC80_16190	COG0811	peptide transport
FOC80_16195	COG1570	exodeoxyribonuclease VII activity
FOC80_16200	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
FOC80_16210	COG0038	chloride channel
FOC80_16215	COG0183	Belongs to the thiolase family
FOC80_16225	COG1278	Cold shock
FOC80_16230	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
FOC80_16235	COG2373	Large extracellular alpha-helical protein
FOC80_16240	COG4953	penicillin-binding protein 1C
FOC80_16250	COG2995	paraquat-inducible protein a
FOC80_16255	COG3008	intermembrane lipid transfer
FOC80_16265	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
FOC80_16265	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
FOC80_16265	COG0506	proline dehydrogenase activity
FOC80_16275	COG0559	Belongs to the binding-protein-dependent transport system permease family
FOC80_16295	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC80_16300	COG1024	Enoyl-CoA hydratase
FOC80_16310	COG1802	Transcriptional regulator
FOC80_16315	COG2271	Major facilitator Superfamily
FOC80_16335	COG0640	Transcriptional regulator
FOC80_16345	COG1914	H( )-stimulated, divalent metal cation uptake system
FOC80_16350	COG1764	response to oxidative stress
FOC80_16360	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC80_16365	COG0765	amino acid transport
FOC80_16370	COG0765	amino acid transport
FOC80_16375	COG1126	abc transporter atp-binding protein
FOC80_16380	COG1902	pentaerythritol trinitrate reductase activity
FOC80_16395	COG0583	DNA-binding transcription factor activity
FOC80_16410	COG0586	Pfam SNARE associated Golgi protein
FOC80_16425	COG3121	Chaperone
FOC80_16430	COG3188	usher protein
FOC80_16450	COG2831	hemolysin activation secretion protein
FOC80_16455	COG2197	response regulator
FOC80_16490	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
FOC80_16495	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
FOC80_16500	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
FOC80_16515	COG0196	riboflavin kinase activity
FOC80_16520	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
FOC80_16525	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
FOC80_16525	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
FOC80_16540	COG0210	DNA helicase
FOC80_16550	COG0488	(ABC) transporter
FOC80_16555	COG2890	protein-(glutamine-N5) methyltransferase activity
FOC80_16565	COG2171	N-acyltransferase activity
FOC80_16570	COG0436	Aminotransferase
FOC80_16580	COG4942	peptidase
FOC80_16585	COG0508	dehydrogenase complex catalyzes the overall conversion of
FOC80_16615	COG2271	Major facilitator Superfamily
FOC80_16620	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
FOC80_16625	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
FOC80_16630	COG0277	FAD linked oxidase domain protein
FOC80_16650	COG3038	cytochrome b561
FOC80_16655	COG2877	3-deoxy-8-phosphooctulonate synthase activity
FOC80_16665	COG3008	intermembrane lipid transfer
FOC80_16700	COG0583	DNA-binding transcription factor activity
FOC80_16710	COG0251	oxidation-reduction process
FOC80_16740	COG1278	Cold shock
FOC80_16750	COG1278	Cold shock
FOC80_16760	COG0501	Belongs to the peptidase M48B family
FOC80_16765	COG0544	peptidyl-prolyl cis-trans isomerase activity
FOC80_16770	COG0740	serine-type endopeptidase activity
FOC80_16775	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
FOC80_16780	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
FOC80_16785	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
FOC80_16790	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_16795	COG0318	PFAM AMP-dependent synthetase and ligase
FOC80_16815	COG0556	nucleotide-excision repair
FOC80_16820	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
FOC80_16830	COG1104	cysteine desulfurase activity
FOC80_16835	COG0822	iron-sulfur transferase activity
FOC80_16840	COG0316	Belongs to the HesB IscA family
FOC80_16845	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
FOC80_16850	COG0443	Heat shock 70 kDa protein
FOC80_16860	COG2975	iron-sulfur cluster assembly
FOC80_16865	COG1803	Methylglyoxal synthase
FOC80_16880	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC80_16890	COG1024	Enoyl-CoA hydratase
FOC80_16920	COG1022	Amp-dependent synthetase and ligase
FOC80_16925	COG0183	Belongs to the thiolase family
FOC80_16930	COG1309	transcriptional regulator
FOC80_16940	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
FOC80_16945	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_16955	COG2271	Major facilitator Superfamily
FOC80_16960	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
FOC80_16975	COG1136	(ABC) transporter
FOC80_16980	COG0084	hydrolase, TatD family'
FOC80_16985	COG4771	TonB-dependent receptor
FOC80_16995	COG2814	Major facilitator Superfamily
FOC80_17000	COG2205	protein histidine kinase activity
FOC80_17005	COG0745	RESPONSE REGULATOR receiver
FOC80_17010	COG4771	TonB-dependent receptor
FOC80_17015	COG4607	ABC-type enterochelin transport system periplasmic component
FOC80_17020	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOC80_17025	COG4605	iron ion homeostasis
FOC80_17030	COG4604	ABC transporter, ATP-binding protein
FOC80_17045	COG2130	NADP-dependent
FOC80_17065	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC80_17070	COG1024	Enoyl-CoA hydratase
FOC80_17075	COG2301	Belongs to the HpcH HpaI aldolase family
FOC80_17080	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_17100	COG0625	glutathione transferase activity
FOC80_17105	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC80_17135	COG1454	alcohol dehydrogenase
FOC80_17140	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
FOC80_17155	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_17165	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_17175	COG3243	poly(R)-hydroxyalkanoic acid synthase
FOC80_17185	COG1850	ribulose-bisphosphate carboxylase activity
FOC80_17195	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
FOC80_17200	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FOC80_17220	COG3707	response regulator
FOC80_17230	COG2815	serine threonine protein kinase
FOC80_17230	COG0515	serine threonine protein kinase
FOC80_17235	COG2116	formate transmembrane transporter activity
FOC80_17240	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
FOC80_17240	COG2146	nitrite reductase [NAD(P)H] activity
FOC80_17245	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
FOC80_17245	COG2146	nitrite reductase [NAD(P)H] activity
FOC80_17250	COG0583	DNA-binding transcription factor activity
FOC80_17260	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
FOC80_17270	COG0613	PHP domain protein
FOC80_17280	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FOC80_17295	COG0047	phosphoribosylformylglycinamidine synthase activity
FOC80_17295	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
FOC80_17310	COG0583	DNA-binding transcription factor activity
FOC80_17330	COG1012	belongs to the aldehyde dehydrogenase family
FOC80_17340	COG4774	siderophore transport
FOC80_17345	COG3712	iron ion homeostasis
FOC80_17375	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_17430	COG1335	isochorismatase
FOC80_17460	COG3468	outer membrane autotransporter barrel domain protein
FOC80_17465	COG1304	FMN binding
FOC80_17470	COG3153	acetyltransferase
FOC80_17480	COG2084	Dehydrogenase
FOC80_17485	COG0129	dihydroxy-acid dehydratase activity
FOC80_17495	COG2271	Major facilitator Superfamily
FOC80_17500	COG0583	DNA-binding transcription factor activity
FOC80_17505	COG4692	amylo-alpha-1,6-glucosidase activity
FOC80_17560	COG3706	GGDEF domain
FOC80_17570	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
FOC80_17600	COG2963	transposase activity
FOC80_17615	COG1396	sequence-specific DNA binding
FOC80_17650	COG0747	negative chemotaxis
FOC80_17660	COG0444	Belongs to the ABC transporter superfamily
FOC80_17665	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOC80_17670	COG0601	transmembrane transport
FOC80_17675	COG2072	flavoprotein involved in K transport
FOC80_17740	COG0519	Catalyzes the synthesis of GMP from XMP
FOC80_17740	COG0518	GMP synthase (glutamine-hydrolyzing) activity
FOC80_17810	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC80_17845	COG0583	DNA-binding transcription factor activity
FOC80_17870	COG3842	ATPase activity
FOC80_17875	COG1178	ABC-type Fe3 transport system permease component
FOC80_17890	COG0753	catalase activity
FOC80_17900	COG3550	peptidyl-serine autophosphorylation
FOC80_17915	COG1063	alcohol dehydrogenase
FOC80_17920	COG3284	Transcriptional regulator
FOC80_17925	COG4647	ligase activity
FOC80_17930	COG0146	N-methylhydantoinase B acetone carboxylase alpha subunit
FOC80_17935	COG0145	ligase activity
FOC80_17950	COG0583	DNA-binding transcription factor activity
FOC80_17975	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FOC80_18020	COG1199	ATP-dependent helicase activity
FOC80_18030	COG0154	amidase activity
FOC80_18035	COG0840	transmembrane signaling receptor activity
FOC80_18040	COG0835	chemotaxis
FOC80_18060	COG2201	protein-glutamate methylesterase activity
FOC80_18065	COG3706	GGDEF domain
FOC80_18065	COG2203	Gaf domain
FOC80_18065	COG5001	Diguanylate cyclase
FOC80_18065	COG4251	negative regulation of phosphorylation
FOC80_18070	COG1522	sequence-specific DNA binding
FOC80_18095	COG0583	DNA-binding transcription factor activity
FOC80_18115	COG0318	PFAM AMP-dependent synthetase and ligase
FOC80_18120	COG1960	acyl-CoA dehydrogenase activity
FOC80_18125	COG1960	acyl-CoA dehydrogenase activity
FOC80_18130	COG0183	Belongs to the thiolase family
FOC80_18135	COG1024	Enoyl-CoA hydratase
FOC80_18135	COG1250	3-hydroxyacyl-CoA dehydrogenase
FOC80_18140	COG0583	DNA-binding transcription factor activity
FOC80_18150	COG2733	membrane
FOC80_18155	COG2032	superoxide dismutase activity
FOC80_18185	COG2885	chlorophyll binding
FOC80_18210	COG0745	RESPONSE REGULATOR receiver
FOC80_18235	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
FOC80_18245	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
FOC80_18265	COG1846	Transcriptional regulator
FOC80_18280	COG0583	DNA-binding transcription factor activity
FOC80_18290	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FOC80_18295	COG0697	spore germination
FOC80_18305	COG4941	Belongs to the sigma-70 factor family
FOC80_18315	COG3795	YCII-related domain
FOC80_18320	COG3795	YCII-related domain
FOC80_18335	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
FOC80_18380	COG2885	chlorophyll binding
FOC80_18380	COG3047	cAMP biosynthetic process
FOC80_18400	COG2207	Transcriptional regulator
FOC80_18410	COG1683	Conserved Protein
FOC80_18435	COG1309	transcriptional regulator
FOC80_18445	COG3655	Transcriptional regulator
FOC80_18450	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_18460	COG4608	Belongs to the ABC transporter superfamily
FOC80_18465	COG0444	Belongs to the ABC transporter superfamily
FOC80_18470	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOC80_18475	COG0601	transmembrane transport
FOC80_18485	COG1802	Transcriptional regulator
FOC80_18490	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
FOC80_18500	COG0667	Aldo Keto reductase
FOC80_18505	COG0477	Major facilitator Superfamily
FOC80_18515	COG1414	Transcriptional regulator
FOC80_18520	COG1802	Transcriptional regulator
FOC80_18530	COG1473	amidohydrolase
FOC80_18545	COG1595	DNA-templated transcription, initiation
FOC80_18555	COG2764	glyoxalase bleomycin resistance protein dioxygenase
FOC80_18625	COG3712	iron ion homeostasis
FOC80_18635	COG3045	CreA protein
FOC80_18645	COG2264	protein methyltransferase activity
FOC80_18650	COG4771	TonB-dependent receptor
FOC80_18660	COG1595	DNA-templated transcription, initiation
FOC80_18680	COG0583	DNA-binding transcription factor activity
FOC80_18690	COG2267	carboxylic ester hydrolase activity
FOC80_18710	COG4774	siderophore transport
FOC80_18720	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
FOC80_18730	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC80_18735	COG0765	amino acid transport
FOC80_18740	COG0765	amino acid transport
FOC80_18745	COG1126	abc transporter atp-binding protein
FOC80_18765	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FOC80_18780	COG2271	Major facilitator Superfamily
FOC80_18785	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FOC80_18800	COG0587	DNA-directed DNA polymerase activity
FOC80_18815	COG0833	amino acid
FOC80_18820	COG0400	carboxylic ester hydrolase activity
FOC80_18830	COG1012	belongs to the aldehyde dehydrogenase family
FOC80_18835	COG0251	oxidation-reduction process
FOC80_18840	COG0251	oxidation-reduction process
FOC80_18850	COG0154	amidase activity
FOC80_18860	COG0411	ABC transporter
FOC80_18880	COG1566	PFAM secretion protein HlyD family protein
FOC80_18900	COG0720	synthase
FOC80_18905	COG0602	queuosine metabolic process
FOC80_18920	COG0583	DNA-binding transcription factor activity
FOC80_18925	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_18930	COG0154	amidase activity
FOC80_18940	COG1902	pentaerythritol trinitrate reductase activity
FOC80_18985	COG0842	Transport permease protein
FOC80_18990	COG1131	(ABC) transporter
FOC80_19000	COG1309	transcriptional regulator
FOC80_19005	COG2130	NADP-dependent
FOC80_19030	COG3842	ATPase activity
FOC80_19035	COG3842	ATPase activity
FOC80_19045	COG0395	ABC-type sugar transport system, permease component
FOC80_19060	COG3634	alkyl hydroperoxide reductase activity
FOC80_19070	COG3387	PFAM Glycoside hydrolase 15-related
FOC80_19075	COG1960	acyl-CoA dehydrogenase activity
FOC80_19105	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FOC80_19110	COG0420	3'-5' exonuclease activity
FOC80_19140	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
FOC80_19140	COG2111	Na H antiporter
FOC80_19145	COG1006	Multisubunit Na H antiporter MnhC subunit
FOC80_19150	COG0651	ATP synthesis coupled electron transport
FOC80_19155	COG1863	multisubunit Na H antiporter MnhE subunit
FOC80_19160	COG2212	antiporter activity
FOC80_19180	COG0590	tRNA wobble adenosine to inosine editing
FOC80_19185	COG1619	proteins homologs of microcin C7 resistance protein MccF
FOC80_19190	COG0583	DNA-binding transcription factor activity
FOC80_19195	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC80_19205	COG0604	alcohol dehydrogenase
FOC80_19210	COG0488	(ABC) transporter
FOC80_19245	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FOC80_19250	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FOC80_19255	COG2252	PERMEase
FOC80_19260	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
FOC80_19265	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
FOC80_19300	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
FOC80_19305	COG0789	Transcriptional regulator
FOC80_19315	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
FOC80_19315	COG0678	peroxiredoxin activity
FOC80_19325	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
FOC80_19330	COG0584	glycerophosphoryl diester phosphodiesterase
FOC80_19340	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FOC80_19350	COG4181	ATPase activity
FOC80_19360	COG1178	ABC-type Fe3 transport system permease component
FOC80_19365	COG3842	ATPase activity
FOC80_19370	COG0583	DNA-binding transcription factor activity
FOC80_19375	COG0560	Phosphoserine phosphatase
FOC80_19385	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
FOC80_19395	COG0583	DNA-binding transcription factor activity
FOC80_19410	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
FOC80_19425	COG0583	DNA-binding transcription factor activity
FOC80_19430	COG4336	lyase activity
FOC80_19460	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FOC80_19505	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC80_19510	COG0765	amino acid transport
FOC80_19515	COG1126	abc transporter atp-binding protein
FOC80_19520	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
FOC80_19525	COG1758	RNA polymerase activity
FOC80_19530	COG0194	GDP metabolic process
FOC80_19535	COG3258	Cytochrome c
FOC80_19540	COG2863	cytochrome
FOC80_19545	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_19550	COG0791	NLP P60 protein
FOC80_19555	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
FOC80_19560	COG0833	amino acid
FOC80_19590	COG1561	YicC-like family, N-terminal region
FOC80_19595	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
FOC80_19600	COG1012	belongs to the aldehyde dehydrogenase family
FOC80_19625	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_19630	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FOC80_19645	COG1960	acyl-CoA dehydrogenase activity
FOC80_19660	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
FOC80_19665	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FOC80_19670	COG0174	glutamine synthetase
FOC80_19680	COG2204	response regulator
FOC80_19685	COG0583	DNA-binding transcription factor activity
FOC80_19690	COG1741	Belongs to the pirin family
FOC80_19695	COG1741	Belongs to the pirin family
FOC80_19700	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_19705	COG3842	ATPase activity
FOC80_19715	COG1840	ABC-type Fe3 transport system, periplasmic component
FOC80_19730	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_19735	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_19740	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_19775	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
FOC80_19780	COG0583	DNA-binding transcription factor activity
FOC80_19785	COG0783	Belongs to the Dps family
FOC80_19800	COG0463	Glycosyl transferase, family 2
FOC80_19820	COG0438	transferase activity, transferring glycosyl groups
FOC80_19830	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
FOC80_19845	COG0300	oxidoreductase activity
FOC80_19855	COG0156	8-amino-7-oxononanoate synthase activity
FOC80_19860	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_19860	COG0604	alcohol dehydrogenase
FOC80_19860	COG3321	synthase
FOC80_19875	COG0745	RESPONSE REGULATOR receiver
FOC80_19880	COG2205	protein histidine kinase activity
FOC80_19890	COG3842	ATPase activity
FOC80_19895	COG0395	ABC-type sugar transport system, permease component
FOC80_19900	COG1175	transmembrane transport
FOC80_19905	COG1653	transport
FOC80_19915	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
FOC80_19930	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC80_19935	COG0583	DNA-binding transcription factor activity
FOC80_19945	COG0559	Belongs to the binding-protein-dependent transport system permease family
FOC80_19965	COG1794	racemase activity, acting on amino acids and derivatives
FOC80_19970	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
FOC80_19985	COG0625	glutathione transferase activity
FOC80_19990	COG2133	pyrroloquinoline quinone binding
FOC80_20000	COG0697	spore germination
FOC80_20005	COG2363	Small membrane protein
FOC80_20035	COG0010	Belongs to the arginase family
FOC80_20040	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
FOC80_20045	COG1464	Belongs to the NlpA lipoprotein family
FOC80_20065	COG1408	metallophosphoesterase
FOC80_20075	COG0688	phosphatidylethanolamine metabolic process
FOC80_20090	COG0488	(ABC) transporter
FOC80_20120	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FOC80_20125	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FOC80_20130	COG2203	Gaf domain
FOC80_20130	COG2199	diguanylate cyclase activity
FOC80_20130	COG2200	EAL domain
FOC80_20135	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FOC80_20150	COG2814	Major facilitator Superfamily
FOC80_20170	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
FOC80_20175	COG2204	response regulator
FOC80_20210	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_20220	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
FOC80_20255	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FOC80_20270	COG3300	MHYT domain
FOC80_20270	COG5001	Diguanylate cyclase
FOC80_20285	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
FOC80_20295	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
FOC80_20300	COG0366	Alpha amylase catalytic
FOC80_20310	COG0297	glycogen (starch) synthase activity
FOC80_20315	COG0028	Belongs to the TPP enzyme family
FOC80_20335	COG0392	lysyltransferase activity
FOC80_20340	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FOC80_20345	COG3568	Endonuclease Exonuclease Phosphatase
FOC80_20350	COG4172	Belongs to the ABC transporter superfamily
FOC80_20365	COG1253	flavin adenine dinucleotide binding
FOC80_20375	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
FOC80_20390	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FOC80_20400	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
FOC80_20455	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
FOC80_20465	COG0628	permease
FOC80_20485	COG1522	sequence-specific DNA binding
FOC80_20500	COG1619	proteins homologs of microcin C7 resistance protein MccF
FOC80_20515	COG0583	DNA-binding transcription factor activity
FOC80_20565	COG1960	acyl-CoA dehydrogenase activity
FOC80_20570	COG1959	2 iron, 2 sulfur cluster binding
FOC80_20620	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
FOC80_20630	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_20635	COG1024	Enoyl-CoA hydratase
FOC80_20640	COG1414	Transcriptional regulator
FOC80_20650	COG0625	glutathione transferase activity
FOC80_20675	COG1937	Protein conserved in bacteria
FOC80_20690	COG0698	ribose 5-phosphate isomerase
FOC80_20695	COG0431	NADPH-dependent FMN reductase
FOC80_20705	COG0798	PFAM Bile acid sodium symporter
FOC80_20725	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FOC80_20735	COG3284	Transcriptional regulator
FOC80_20745	COG0583	DNA-binding transcription factor activity
FOC80_20760	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FOC80_20795	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FOC80_20810	COG0277	FAD linked oxidase domain protein
FOC80_20815	COG1414	Transcriptional regulator
FOC80_20840	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_20845	COG0477	Major facilitator Superfamily
FOC80_20855	COG0583	DNA-binding transcription factor activity
FOC80_20860	COG2353	YceI-like domain
FOC80_20865	COG1335	isochorismatase
FOC80_20925	COG2271	Major facilitator Superfamily
FOC80_20935	COG0583	DNA-binding transcription factor activity
FOC80_20950	COG0747	negative chemotaxis
FOC80_20960	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOC80_20965	COG0444	Belongs to the ABC transporter superfamily
FOC80_20970	COG4608	Belongs to the ABC transporter superfamily
FOC80_20980	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FOC80_21000	COG0028	Belongs to the TPP enzyme family
FOC80_21010	COG1012	belongs to the aldehyde dehydrogenase family
FOC80_21030	COG0583	DNA-binding transcription factor activity
FOC80_21035	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_21050	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FOC80_21080	COG0390	transport system, permease component
FOC80_21085	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
FOC80_21090	COG1126	abc transporter atp-binding protein
FOC80_21095	COG0765	amino acid transport
FOC80_21120	COG0765	amino acid transport
FOC80_21125	COG0010	Belongs to the arginase family
FOC80_21130	COG1126	abc transporter atp-binding protein
FOC80_21140	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FOC80_21145	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FOC80_21150	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
FOC80_21180	COG4566	intracellular signal transduction
FOC80_21185	COG1960	acyl-CoA dehydrogenase activity
FOC80_21190	COG1024	Enoyl-CoA hydratase
FOC80_21195	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_21205	COG0583	DNA-binding transcription factor activity
FOC80_21225	COG0583	DNA-binding transcription factor activity
FOC80_21255	COG0765	amino acid transport
FOC80_21260	COG0436	Aminotransferase
FOC80_21295	COG4774	siderophore transport
FOC80_21315	COG1764	response to oxidative stress
FOC80_21320	COG0583	DNA-binding transcription factor activity
FOC80_21330	COG1595	DNA-templated transcription, initiation
FOC80_21340	COG4948	Mandelate Racemase Muconate Lactonizing
FOC80_21355	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
FOC80_21375	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FOC80_21380	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FOC80_21385	COG1116	anion transmembrane transporter activity
FOC80_21415	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
FOC80_21420	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC80_21425	COG4597	amino acid ABC transporter
FOC80_21430	COG3154	lipid carrier protein
FOC80_21435	COG0826	peptidase U32
FOC80_21440	COG0826	peptidase U32
FOC80_21445	COG2197	response regulator
FOC80_21450	COG3850	Histidine kinase
FOC80_21455	COG1763	Mo-molybdopterin cofactor biosynthetic process
FOC80_21460	COG0288	reversible hydration of carbon dioxide
FOC80_21465	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
FOC80_21470	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FOC80_21475	COG2181	nitrate reductase activity
FOC80_21480	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
FOC80_21485	COG1140	nitrate reductase beta subunit
FOC80_21490	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
FOC80_21495	COG2223	nitrite transmembrane transporter activity
FOC80_21565	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FOC80_21605	COG1328	CTP reductase activity
FOC80_21620	COG2070	2-Nitropropane dioxygenase
FOC80_21630	COG0574	Belongs to the PEP-utilizing enzyme family
FOC80_21630	COG3848	Pyruvate phosphate dikinase
FOC80_21635	COG2205	protein histidine kinase activity
FOC80_21640	COG0745	RESPONSE REGULATOR receiver
FOC80_21645	COG4117	Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein)
FOC80_21650	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
FOC80_21660	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FOC80_21665	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FOC80_21675	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FOC80_21680	COG0410	ABC transporter
FOC80_21695	COG0559	Belongs to the binding-protein-dependent transport system permease family
FOC80_21710	COG0583	DNA-binding transcription factor activity
FOC80_21720	COG0783	Belongs to the Dps family
FOC80_21730	COG2879	small protein
FOC80_21735	COG1966	Carbon starvation protein
FOC80_21755	COG4521	taurine ABC transporter
FOC80_21760	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
FOC80_21765	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FOC80_21775	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FOC80_21790	COG1228	amidohydrolase
FOC80_21805	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOC80_21810	COG0601	transmembrane transport
FOC80_21815	COG0747	negative chemotaxis
FOC80_21830	COG1414	Transcriptional regulator
FOC80_21835	COG0513	Belongs to the DEAD box helicase family
FOC80_21860	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC80_21885	COG2207	Transcriptional regulator
FOC80_21895	COG2814	Major facilitator Superfamily
FOC80_21905	COG2814	Major facilitator Superfamily
FOC80_21910	COG0386	Belongs to the glutathione peroxidase family
FOC80_21915	COG1522	sequence-specific DNA binding
FOC80_21925	COG0625	glutathione transferase activity
FOC80_21940	COG0095	Lipoate-protein ligase
FOC80_21950	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FOC80_21955	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
FOC80_21960	COG0010	Belongs to the arginase family
FOC80_21965	COG1126	abc transporter atp-binding protein
FOC80_21975	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC80_21985	COG0154	amidase activity
FOC80_21995	COG1137	ATPase activity
FOC80_22015	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC80_22020	COG1024	Enoyl-CoA hydratase
FOC80_22030	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
FOC80_22045	COG0084	hydrolase, TatD family'
FOC80_22050	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
FOC80_22055	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
FOC80_22060	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
FOC80_22085	COG1250	3-hydroxyacyl-CoA dehydrogenase
FOC80_22085	COG1024	Enoyl-CoA hydratase
FOC80_22090	COG1960	acyl-CoA dehydrogenase activity
FOC80_22095	COG2914	Belongs to the UPF0125 (RnfH) family
FOC80_22100	COG2867	negative regulation of translational initiation
FOC80_22105	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
FOC80_22115	COG0330	HflC and HflK could
FOC80_22125	COG0519	Catalyzes the synthesis of GMP from XMP
FOC80_22125	COG0518	GMP synthase (glutamine-hydrolyzing) activity
FOC80_22130	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FOC80_22130	COG2169	Transcriptional regulator
FOC80_22155	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FOC80_22160	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
FOC80_22175	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
FOC80_22180	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FOC80_22185	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
FOC80_22190	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FOC80_22195	COG0750	zinc metalloprotease
FOC80_22200	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
FOC80_22205	COG0575	Belongs to the CDS family
FOC80_22210	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
FOC80_22215	COG0233	cytoplasmic translational termination
FOC80_22220	COG0528	UMP kinase activity
FOC80_22225	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
FOC80_22230	COG0052	Belongs to the universal ribosomal protein uS2 family
FOC80_22235	COG0024	Methionine aminopeptidase
FOC80_22240	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
FOC80_22250	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
FOC80_22260	COG1451	nucleotide metabolic process
FOC80_22280	COG1286	toxin biosynthetic process
FOC80_22290	COG0285	dihydrofolate synthase activity
FOC80_22300	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_22305	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC80_22320	COG1334	flagellar protein FlaG
FOC80_22345	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
FOC80_22355	COG1677	Flagellar hook-basal body complex protein FliE
FOC80_22365	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FOC80_22370	COG1317	bacterial-type flagellum organization
FOC80_22375	COG1157	protein secretion by the type III secretion system
FOC80_22390	COG1580	Controls the rotational direction of flagella during chemotaxis
FOC80_22400	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FOC80_22425	COG0840	transmembrane signaling receptor activity
FOC80_22440	COG0840	transmembrane signaling receptor activity
FOC80_22445	COG0840	transmembrane signaling receptor activity
FOC80_22455	COG1256	bacterial-type flagellum assembly
FOC80_22480	COG4787	bacterial-type flagellum-dependent cell motility
FOC80_22495	COG1558	bacterial-type flagellum-dependent cell motility
FOC80_22500	COG1815	bacterial-type flagellum-dependent cell motility
FOC80_22510	COG2747	anti-sigma28 factor FlgM
FOC80_22525	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
FOC80_22535	COG0840	transmembrane signaling receptor activity
FOC80_22540	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
FOC80_22545	COG0745	RESPONSE REGULATOR receiver
FOC80_22550	COG2201	protein-glutamate methylesterase activity
FOC80_22555	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
FOC80_22560	COG0840	transmembrane signaling receptor activity
FOC80_22565	COG0835	chemotaxis
FOC80_22575	COG0745	RESPONSE REGULATOR receiver
FOC80_22580	COG1360	Flagellar Motor Protein
FOC80_22600	COG1191	sigma factor activity
FOC80_22625	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FOC80_22630	COG0508	dehydrogenase complex catalyzes the overall conversion of
FOC80_22645	COG4566	intracellular signal transduction
FOC80_22650	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
FOC80_22655	COG0339	signal peptide processing
FOC80_22660	COG1999	signal sequence binding
FOC80_22690	COG1187	pseudouridine synthase activity
FOC80_22695	COG3161	chorismate lyase activity
FOC80_22720	COG1335	isochorismatase
FOC80_22735	COG0066	3-isopropylmalate dehydratase activity
FOC80_22740	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
FOC80_22770	COG2188	Transcriptional regulator
FOC80_22805	COG4681	YaeQ
FOC80_22815	COG4172	Belongs to the ABC transporter superfamily
FOC80_22825	COG0601	transmembrane transport
FOC80_22830	COG0747	negative chemotaxis
FOC80_22840	COG0583	DNA-binding transcription factor activity
FOC80_22930	COG0668	transmembrane transport
FOC80_22935	COG0165	Argininosuccinate lyase
FOC80_22940	COG0583	DNA-binding transcription factor activity
FOC80_22945	COG2814	Major facilitator Superfamily
FOC80_22960	COG0154	amidase activity
FOC80_22965	COG0583	DNA-binding transcription factor activity
FOC80_22980	COG0022	dehydrogenase e1 component
FOC80_22985	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
FOC80_22990	COG1960	acyl-CoA dehydrogenase activity
FOC80_22995	COG1309	transcriptional regulator
FOC80_23005	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC80_23015	COG0154	amidase activity
FOC80_23020	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_23025	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_23040	COG1176	ABC-type spermidine putrescine transport system, permease component I
FOC80_23045	COG3842	ATPase activity
FOC80_23065	COG0789	Transcriptional regulator
FOC80_23085	COG0840	transmembrane signaling receptor activity
FOC80_23095	COG2271	Major facilitator Superfamily
FOC80_23110	COG0307	riboflavin synthase, alpha
FOC80_23120	COG2186	Transcriptional regulator
FOC80_23125	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_23150	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
FOC80_23155	COG0560	Phosphoserine phosphatase
FOC80_23165	COG1609	Transcriptional regulator
FOC80_23180	COG0411	ABC transporter
FOC80_23190	COG0559	Belongs to the binding-protein-dependent transport system permease family
FOC80_23200	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FOC80_23205	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
FOC80_23210	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_23270	COG2814	Major facilitator Superfamily
FOC80_23320	COG0318	PFAM AMP-dependent synthetase and ligase
FOC80_23325	COG2186	Transcriptional regulator
FOC80_23335	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC80_23340	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_23345	COG0583	DNA-binding transcription factor activity
FOC80_23400	COG1309	transcriptional regulator
FOC80_23410	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_23415	COG3706	GGDEF domain
FOC80_23420	COG0387	Pfam Sodium calcium exchanger
FOC80_23430	COG0820	rRNA (adenine-C2-)-methyltransferase activity
FOC80_23435	COG0697	spore germination
FOC80_23440	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_23445	COG4977	sequence-specific DNA binding
FOC80_23450	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FOC80_23465	COG0583	DNA-binding transcription factor activity
FOC80_23470	COG0109	protoheme IX farnesyltransferase activity
FOC80_23480	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_23535	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_23555	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FOC80_23565	COG1802	Transcriptional regulator
FOC80_23570	COG5265	(ABC) transporter
FOC80_23575	COG1280	lysine exporter protein (LysE YggA)
FOC80_23595	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_23610	COG0318	PFAM AMP-dependent synthetase and ligase
FOC80_23615	COG2188	Transcriptional regulator
FOC80_23630	COG0477	Major facilitator Superfamily
FOC80_23635	COG0235	Class ii aldolase
FOC80_23645	COG1051	belongs to the nudix hydrolase family
FOC80_23650	COG0583	DNA-binding transcription factor activity
FOC80_23660	COG2223	nitrite transmembrane transporter activity
FOC80_23670	COG2610	gluconate transmembrane transporter activity
FOC80_23675	COG0583	DNA-binding transcription factor activity
FOC80_23680	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_23685	COG1024	Enoyl-CoA hydratase
FOC80_23690	COG5001	Diguanylate cyclase
FOC80_23695	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_23700	COG0129	dihydroxy-acid dehydratase activity
FOC80_23715	COG1126	abc transporter atp-binding protein
FOC80_23720	COG0765	amino acid transport
FOC80_23725	COG0765	amino acid transport
FOC80_23735	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
FOC80_23750	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC80_23760	COG4771	TonB-dependent receptor
FOC80_23775	COG1429	ligase activity, forming nitrogen-metal bonds
FOC80_23810	COG2382	esterase
FOC80_23825	COG0753	catalase activity
FOC80_23840	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
FOC80_23845	COG0583	DNA-binding transcription factor activity
FOC80_23850	COG1250	3-hydroxyacyl-CoA dehydrogenase
FOC80_23855	COG3246	L-lysine catabolic process to acetate
FOC80_23875	COG3043	anaerobic respiration
FOC80_23880	COG3005	denitrification pathway
FOC80_23885	COG4133	protoheme IX ABC transporter activity
FOC80_23905	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
FOC80_23915	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FOC80_23970	COG1064	alcohol dehydrogenase
FOC80_24010	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FOC80_24020	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_24035	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_24045	COG2188	Transcriptional regulator
FOC80_24075	COG1137	ATPase activity
FOC80_24080	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
FOC80_24090	COG1274	phosphoenolpyruvate carboxykinase (GTP) activity
FOC80_24095	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FOC80_24105	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_24110	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
FOC80_24125	COG0697	spore germination
FOC80_24150	COG1280	lysine exporter protein (LysE YggA)
FOC80_24165	COG1280	lysine exporter protein (LysE YggA)
FOC80_24170	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
FOC80_24175	COG3245	cytochrome
FOC80_24185	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FOC80_24215	COG0318	PFAM AMP-dependent synthetase and ligase
FOC80_24220	COG1960	acyl-CoA dehydrogenase activity
FOC80_24225	COG2814	Major facilitator Superfamily
FOC80_24240	COG0625	glutathione transferase activity
FOC80_24260	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_24265	COG3246	L-lysine catabolic process to acetate
FOC80_24295	COG0506	proline dehydrogenase activity
FOC80_24300	COG0697	spore germination
FOC80_24305	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FOC80_24310	COG1959	2 iron, 2 sulfur cluster binding
FOC80_24320	COG1610	YqeY-like protein
FOC80_24350	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_24365	COG0457	Tetratricopeptide repeat
FOC80_24370	COG1649	PFAM Uncharacterised BCR, COG1649
FOC80_24370	COG0726	polysaccharide deacetylase
FOC80_24375	COG1215	transferase activity, transferring glycosyl groups
FOC80_24380	COG3658	cytochrome
FOC80_24385	COG2223	nitrite transmembrane transporter activity
FOC80_24390	COG4977	sequence-specific DNA binding
FOC80_24390	COG1917	Cupin 2, conserved barrel domain protein
FOC80_24400	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
FOC80_24415	COG0656	L-ascorbic acid biosynthetic process
FOC80_24420	COG5265	(ABC) transporter
FOC80_24450	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_24490	COG1522	sequence-specific DNA binding
FOC80_24515	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_24525	COG0456	acetyltransferase
FOC80_24530	COG0384	phenazine biosynthesis protein PhzF
FOC80_24535	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_24540	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FOC80_24565	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
FOC80_24570	COG4638	Rieske (2fe-2S)
FOC80_24600	COG5002	protein histidine kinase activity
FOC80_24645	COG0776	regulation of translation
FOC80_24650	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FOC80_24650	COG0072	phenylalanine-tRNA ligase activity
FOC80_24655	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
FOC80_24660	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
FOC80_24665	COG0291	Belongs to the bacterial ribosomal protein bL35 family
FOC80_24670	COG0606	chelatase, subunit chli
FOC80_24675	COG2960	long-chain fatty acid transporting porin activity
FOC80_24695	COG0640	Transcriptional regulator
FOC80_24700	COG0347	Belongs to the P(II) protein family
FOC80_24705	COG0004	ammonium transporteR
FOC80_24710	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
FOC80_24715	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOC80_24730	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
FOC80_24735	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
FOC80_24745	COG2197	response regulator
FOC80_24750	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FOC80_24770	COG0601	transmembrane transport
FOC80_24775	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOC80_24780	COG4172	Belongs to the ABC transporter superfamily
FOC80_24790	COG0129	dihydroxy-acid dehydratase activity
FOC80_24850	COG1278	Cold shock
FOC80_24860	COG0135	phosphoribosylanthranilate isomerase activity
FOC80_24865	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
FOC80_24870	COG0101	tRNA pseudouridine synthase activity
FOC80_24880	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
FOC80_24900	COG1538	Outer membrane efflux protein
FOC80_24915	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FOC80_24940	COG4783	chaperone-mediated protein folding
FOC80_24945	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
FOC80_24960	COG2205	protein histidine kinase activity
FOC80_24970	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
FOC80_24980	COG1295	ribonuclease BN
FOC80_24990	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FOC80_25020	COG4964	Belongs to the GSP D family
FOC80_25055	COG2030	dehydratase
FOC80_25060	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_25075	COG0439	Biotin carboxylase
FOC80_25080	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
FOC80_25085	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
FOC80_25145	COG0828	Belongs to the bacterial ribosomal protein bS21 family
FOC80_25150	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
FOC80_25155	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
FOC80_25160	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
FOC80_25165	COG0330	HflC and HflK could
FOC80_25170	COG0330	HflC and HflK could
FOC80_25175	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
FOC80_25180	COG1923	regulation of RNA biosynthetic process
FOC80_25185	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
FOC80_25190	COG1160	GTP binding
FOC80_25195	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FOC80_25200	COG2976	Protein conserved in bacteria
FOC80_25205	COG0124	histidyl-tRNA synthetase
FOC80_25220	COG0820	rRNA (adenine-C2-)-methyltransferase activity
FOC80_25225	COG0105	UTP biosynthetic process
FOC80_25230	COG0525	valine-tRNA ligase activity
FOC80_25235	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FOC80_25245	COG0765	amino acid transport
FOC80_25250	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC80_25255	COG1396	sequence-specific DNA binding
FOC80_25260	COG0336	Belongs to the RNA methyltransferase TrmD family
FOC80_25265	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
FOC80_25270	COG0228	four-way junction DNA binding
FOC80_25280	COG0425	Belongs to the sulfur carrier protein TusA family
FOC80_25285	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
FOC80_25335	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FOC80_25345	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
FOC80_25350	COG3217	Mosc domain protein beta barrel domain protein
FOC80_25350	COG0633	Ferredoxin
FOC80_25355	COG5285	phytanoyl-CoA dioxygenase
FOC80_25360	COG0662	Cupin 2, conserved barrel domain protein
FOC80_25385	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FOC80_25390	COG2358	TRAP transporter, solute receptor (TAXI family
FOC80_25400	COG2311	Membrane
FOC80_25425	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
FOC80_25435	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
FOC80_25440	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
FOC80_25460	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
FOC80_25470	COG3391	amine dehydrogenase activity
FOC80_25500	COG1846	Transcriptional regulator
FOC80_25510	COG1566	PFAM secretion protein HlyD family protein
FOC80_25515	COG2814	Major facilitator Superfamily
FOC80_25525	COG0473	3-isopropylmalate dehydrogenase activity
FOC80_25530	COG0433	COG0433 Predicted ATPase
FOC80_25535	COG0217	transcriptional regulatory protein
FOC80_25540	COG0151	Belongs to the GarS family
FOC80_25550	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
FOC80_25555	COG0799	negative regulation of ribosome biogenesis
FOC80_25560	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
FOC80_25565	COG0424	maF-like protein
FOC80_25570	COG1301	dicarboxylic acid transport
FOC80_25575	COG4191	Histidine kinase
FOC80_25580	COG2204	response regulator
FOC80_25610	COG1530	ribonuclease E activity
FOC80_25625	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
FOC80_25625	COG0475	glutathione-regulated potassium exporter activity
FOC80_25630	COG1132	(ABC) transporter
FOC80_25650	COG0124	histidyl-tRNA synthetase
FOC80_25660	COG0726	polysaccharide deacetylase
FOC80_25675	COG0726	polysaccharide deacetylase
FOC80_25680	COG0438	transferase activity, transferring glycosyl groups
FOC80_25695	COG1116	anion transmembrane transporter activity
FOC80_25700	COG0395	ABC-type sugar transport system, permease component
FOC80_25705	COG1643	Atp-dependent helicase
FOC80_25710	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
FOC80_25710	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
FOC80_25715	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
FOC80_25725	COG0704	Plays a role in the regulation of phosphate uptake
FOC80_25730	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
FOC80_25735	COG1960	acyl-CoA dehydrogenase activity
FOC80_25765	COG1177	transmembrane transport
FOC80_25770	COG1176	ABC-type spermidine putrescine transport system, permease component I
FOC80_25775	COG3842	ATPase activity
FOC80_25785	COG3642	lipopolysaccharide core region biosynthetic process
FOC80_25795	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
FOC80_25800	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FOC80_25815	COG4608	Belongs to the ABC transporter superfamily
FOC80_25820	COG0444	Belongs to the ABC transporter superfamily
FOC80_25825	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
FOC80_25835	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOC80_25845	COG0747	negative chemotaxis
FOC80_25865	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
FOC80_25870	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
FOC80_25905	COG5002	protein histidine kinase activity
FOC80_25915	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FOC80_25920	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FOC80_25930	COG0137	argininosuccinate synthase activity
FOC80_25935	COG3158	transport of potassium into the cell
FOC80_25940	COG0642	Histidine kinase
FOC80_25945	COG0745	RESPONSE REGULATOR receiver
FOC80_25970	COG0776	regulation of translation
FOC80_25975	COG3128	pkhd-type hydroxylase
FOC80_25980	COG0626	cystathionine gamma-synthase activity
FOC80_25985	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FOC80_25990	COG0557	exoribonuclease II activity
FOC80_26025	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
FOC80_26030	COG2391	methyltransferase activity
FOC80_26035	COG0069	glutamate synthase activity
FOC80_26040	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FOC80_26050	COG4301	Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine
FOC80_26135	COG3909	cytochrome
FOC80_26145	COG0625	glutathione transferase activity
FOC80_26150	COG0730	response to heat
FOC80_26155	COG0482	sulfurtransferase activity
FOC80_26160	COG0583	DNA-binding transcription factor activity
FOC80_26190	COG0247	lactate metabolic process
FOC80_26195	COG0277	FAD linked oxidase domain protein
FOC80_26200	COG0277	FAD linked oxidase domain protein
FOC80_26205	COG0277	FAD linked oxidase domain protein
FOC80_26210	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FOC80_26215	COG0312	modulator of DNA gyrase
FOC80_26230	COG0308	aminopeptidase N
FOC80_26235	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
FOC80_26255	COG0436	Aminotransferase
FOC80_26265	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
FOC80_26270	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
FOC80_26305	COG0181	hydroxymethylbilane synthase activity
FOC80_26310	COG0861	Integral membrane protein TerC family
FOC80_26315	COG0861	Integral membrane protein TerC family
FOC80_26320	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
FOC80_26325	COG0045	succinate-CoA ligase (ADP-forming) activity
FOC80_26340	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FOC80_26355	COG2137	regulation of response to DNA damage stimulus
FOC80_26360	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
FOC80_26370	COG0642	Histidine kinase
FOC80_26395	COG0540	Belongs to the ATCase OTCase family
FOC80_26445	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC80_26480	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
FOC80_26490	COG0305	Participates in initiation and elongation during chromosome replication
FOC80_26500	COG0359	binds to the 23S rRNA
FOC80_26505	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
FOC80_26510	COG2965	DNA replication, synthesis of RNA primer
FOC80_26515	COG0360	Binds together with S18 to 16S ribosomal RNA
FOC80_26520	COG3739	integral membrane protein
FOC80_26525	COG1469	GTP cyclohydrolase I activity
FOC80_26535	COG0142	geranyltranstransferase activity
FOC80_26540	COG1722	exodeoxyribonuclease VII activity
FOC80_26550	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_26575	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FOC80_26585	COG3842	ATPase activity
FOC80_26605	COG0583	DNA-binding transcription factor activity
FOC80_26620	COG0501	Belongs to the peptidase M48B family
FOC80_26625	COG1760	l-serine dehydratase
FOC80_26630	COG1283	sodium-dependent phosphate transmembrane transporter activity
FOC80_26645	COG0428	transporter
FOC80_26655	COG1611	Belongs to the LOG family
FOC80_26660	COG1473	amidohydrolase
FOC80_26665	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_26675	COG0583	DNA-binding transcription factor activity
FOC80_26690	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
FOC80_26695	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
FOC80_26700	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
FOC80_26705	COG0195	Participates in both transcription termination and antitermination
FOC80_26705	COG2251	uridine kinase activity
FOC80_26710	COG0779	Required for maturation of 30S ribosomal subunits
FOC80_26715	COG1187	pseudouridine synthase activity
FOC80_26720	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
FOC80_26730	COG0583	DNA-binding transcription factor activity
FOC80_26735	COG0523	cobalamin synthesis protein
FOC80_26770	COG1250	3-hydroxyacyl-CoA dehydrogenase
FOC80_26780	COG0642	Histidine kinase
FOC80_26785	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FOC80_26790	COG0625	glutathione transferase activity
FOC80_26795	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
FOC80_26800	COG1047	Peptidyl-prolyl cis-trans
FOC80_26805	COG2003	Belongs to the UPF0758 family
FOC80_26810	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
FOC80_26815	COG3483	tryptophan 2,3-dioxygenase activity
FOC80_26830	COG0534	Mate efflux family protein
FOC80_26840	COG2050	protein possibly involved in aromatic compounds catabolism
FOC80_26845	COG1024	Enoyl-CoA hydratase
FOC80_26850	COG1012	belongs to the aldehyde dehydrogenase family
FOC80_26855	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FOC80_26860	COG2151	metal-sulfur cluster biosynthetic enzyme
FOC80_26865	COG3396	Phenylacetate-CoA oxygenase
FOC80_26870	COG3460	Phenylacetate-CoA oxygenase
FOC80_26875	COG3396	Phenylacetate-CoA oxygenase
FOC80_26880	COG3327	negative regulation of DNA-templated transcription, initiation
FOC80_26885	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
FOC80_26910	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
FOC80_26915	COG0501	Belongs to the peptidase M48B family
FOC80_26920	COG1162	GTPase activity
FOC80_26925	COG0494	nUDIX hydrolase
FOC80_26930	COG0335	large ribosomal subunit rRNA binding
FOC80_26960	COG0175	sulfate reduction
FOC80_26965	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
FOC80_26970	COG4208	sulfate ABC transporter
FOC80_26980	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
FOC80_26985	COG0450	alkyl hydroperoxide reductase
FOC80_26990	COG1960	acyl-CoA dehydrogenase activity
FOC80_27000	COG1250	3-hydroxyacyl-CoA dehydrogenase
FOC80_27000	COG1024	Enoyl-CoA hydratase
FOC80_27005	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC80_27015	COG2985	domain, Protein
FOC80_27040	COG0123	including yeast histone deacetylase and acetoin utilization protein
FOC80_27045	COG2951	lytic endotransglycosylase activity
FOC80_27075	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FOC80_27080	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
FOC80_27085	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
FOC80_27105	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
FOC80_27110	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
FOC80_27115	COG0287	Prephenate dehydrogenase
FOC80_27120	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
FOC80_27125	COG1605	Chorismate mutase
FOC80_27125	COG0077	Prephenate dehydratase
FOC80_27130	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
FOC80_27145	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
FOC80_27210	COG0741	lytic transglycosylase activity
FOC80_27445	COG0582	viral genome integration into host DNA
FOC80_27460	COG2015	COG2015, Alkyl sulfatase and related hydrolases
FOC80_27475	COG2951	lytic endotransglycosylase activity
FOC80_27480	COG2258	MOSC domain
FOC80_27485	COG2833	Protein of unknown function (DUF455)
FOC80_27500	COG1132	(ABC) transporter
FOC80_27505	COG0189	ligase activity
FOC80_27505	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
FOC80_27510	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
FOC80_27510	COG0189	ligase activity
FOC80_27515	COG3237	CsbD-like
FOC80_27540	COG0672	)-iron permease
FOC80_27555	COG5394	Polyhydroxyalkanoate synthesis repressor PhaR
FOC80_27560	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_27565	COG3243	poly(R)-hydroxyalkanoic acid synthase
FOC80_27575	COG0564	pseudouridine synthase activity
FOC80_27595	COG1199	ATP-dependent helicase activity
FOC80_27600	COG2183	response to ionizing radiation
FOC80_27605	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FOC80_27610	COG1116	anion transmembrane transporter activity
FOC80_27625	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FOC80_27635	COG1414	Transcriptional regulator
FOC80_27640	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_27645	COG0028	Belongs to the TPP enzyme family
FOC80_27650	COG1712	Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate
FOC80_27655	COG1012	belongs to the aldehyde dehydrogenase family
FOC80_27685	COG4774	siderophore transport
FOC80_27690	COG3712	iron ion homeostasis
FOC80_27695	COG1595	DNA-templated transcription, initiation
FOC80_27700	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
FOC80_27705	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FOC80_27710	COG0508	dehydrogenase complex catalyzes the overall conversion of
FOC80_27715	COG0567	Dehydrogenase, E1 component
FOC80_27740	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FOC80_27745	COG1297	OPT oligopeptide transporter protein
FOC80_27755	COG0281	malic enzyme
FOC80_27755	COG0280	phosphate acetyltransferase
FOC80_27805	COG0372	Belongs to the citrate synthase family
FOC80_27810	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
FOC80_27815	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
FOC80_27820	COG1053	succinate dehydrogenase
FOC80_27825	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
FOC80_27830	COG2009	succinate dehydrogenase
FOC80_27835	COG2188	Transcriptional regulator
FOC80_27840	COG0039	L-malate dehydrogenase activity
FOC80_27885	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FOC80_27895	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
FOC80_27910	COG0148	phosphopyruvate hydratase activity
FOC80_27920	COG0504	CTP synthase activity
FOC80_27945	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOC80_27955	COG0747	negative chemotaxis
FOC80_27960	COG4172	Belongs to the ABC transporter superfamily
FOC80_27965	COG1446	asparaginase
FOC80_27975	COG2153	protein acetylation
FOC80_28015	COG1802	Transcriptional regulator
FOC80_28025	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
FOC80_28030	COG0697	spore germination
FOC80_28035	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FOC80_28045	COG3193	protein, possibly involved in utilization of glycolate and propanediol
FOC80_28055	COG0791	NLP P60 protein
FOC80_28065	COG0583	DNA-binding transcription factor activity
FOC80_28090	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
FOC80_28120	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_28130	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
FOC80_28140	COG1381	Involved in DNA repair and RecF pathway recombination
FOC80_28145	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
FOC80_28150	COG0571	ribonuclease III activity
FOC80_28155	COG0681	Belongs to the peptidase S26 family
FOC80_28165	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FOC80_28185	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FOC80_28190	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FOC80_28195	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_28200	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
FOC80_28205	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FOC80_28210	COG0416	fatty acid biosynthetic process
FOC80_28215	COG0333	Belongs to the bacterial ribosomal protein bL32 family
FOC80_28220	COG1399	metal-binding, possibly nucleic acid-binding protein
FOC80_28225	COG0424	maF-like protein
FOC80_28235	COG3023	N-Acetylmuramoyl-L-alanine amidase
FOC80_28240	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
FOC80_28245	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
FOC80_28250	COG0546	phosphoglycolate phosphatase activity
FOC80_28260	COG1530	ribonuclease E activity
FOC80_28275	COG2721	sulfolactate sulfo-lyase activity
FOC80_28285	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
FOC80_28290	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
FOC80_28295	COG0159	tryptophan synthase activity
FOC80_28315	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
FOC80_28320	COG3228	Belongs to the MtfA family
FOC80_28325	COG0655	NAD(P)H dehydrogenase (quinone) activity
FOC80_28330	COG0251	oxidation-reduction process
FOC80_28335	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
FOC80_28355	COG2878	Part of a membrane complex involved in electron transport
FOC80_28360	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
FOC80_28395	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FOC80_28430	COG1268	BioY protein
FOC80_28435	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
FOC80_28440	COG1122	ATPase activity
FOC80_28445	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FOC80_28450	COG2917	probably involved in intracellular septation
FOC80_28455	COG0271	Belongs to the BolA IbaG family
FOC80_28460	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FOC80_28465	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
FOC80_28475	COG1196	nuclear chromosome segregation
FOC80_28480	COG0477	Major facilitator Superfamily
FOC80_28485	COG1573	uracil-dna glycosylase
FOC80_28495	COG0745	RESPONSE REGULATOR receiver
FOC80_28500	COG2205	protein histidine kinase activity
FOC80_28505	COG0450	alkyl hydroperoxide reductase
FOC80_28510	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FOC80_28515	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
FOC80_28520	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
FOC80_28525	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
FOC80_28530	COG0560	Phosphoserine phosphatase
FOC80_28535	COG4774	siderophore transport
FOC80_28545	COG1007	ATP synthesis coupled electron transport
FOC80_28560	COG0713	ATP synthesis coupled electron transport
FOC80_28570	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FOC80_28575	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
FOC80_28580	COG1034	ATP synthesis coupled electron transport
FOC80_28590	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
FOC80_28600	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FOC80_28605	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FOC80_28610	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FOC80_28615	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FOC80_28640	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
FOC80_28645	COG1597	lipid kinase activity
FOC80_28665	COG1309	transcriptional regulator
FOC80_28675	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FOC80_28695	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FOC80_28700	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FOC80_28705	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FOC80_28725	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FOC80_28745	COG0747	negative chemotaxis
FOC80_28755	COG4172	Belongs to the ABC transporter superfamily
FOC80_28775	COG2354	Protein conserved in bacteria
FOC80_28780	COG3813	Protein conserved in bacteria
FOC80_28790	COG2846	Di-iron-containing protein involved in the repair of iron-sulfur clusters
FOC80_28795	COG3604	Transcriptional regulator
FOC80_28805	COG0604	alcohol dehydrogenase
FOC80_28810	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC80_28815	COG0583	DNA-binding transcription factor activity
FOC80_28820	COG0583	DNA-binding transcription factor activity
FOC80_28835	COG4172	Belongs to the ABC transporter superfamily
FOC80_28840	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOC80_28845	COG0601	transmembrane transport
FOC80_28855	COG3119	arylsulfatase activity
FOC80_28865	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_28870	COG2851	Citrate transporter
FOC80_28910	COG0318	PFAM AMP-dependent synthetase and ligase
FOC80_28995	COG1116	anion transmembrane transporter activity
FOC80_29060	COG0006	proline dipeptidase activity
FOC80_29070	COG1176	ABC-type spermidine putrescine transport system, permease component I
FOC80_29075	COG3842	ATPase activity
FOC80_29080	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
FOC80_29085	COG0583	DNA-binding transcription factor activity
FOC80_29095	COG0583	DNA-binding transcription factor activity
FOC80_29110	COG2814	Major facilitator Superfamily
FOC80_29115	COG1335	isochorismatase
FOC80_29125	COG1802	Transcriptional regulator
FOC80_29140	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC80_29145	COG1024	Enoyl-CoA hydratase
FOC80_29155	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FOC80_29185	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_29195	COG2267	carboxylic ester hydrolase activity
FOC80_29210	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
FOC80_29215	COG1250	3-hydroxyacyl-CoA dehydrogenase
FOC80_29255	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FOC80_29275	COG1024	Enoyl-CoA hydratase
FOC80_29295	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
FOC80_29305	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC80_29310	COG2030	dehydratase
FOC80_29315	COG0183	Belongs to the thiolase family
FOC80_29325	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_29335	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_29345	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_29380	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_29385	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_29390	COG0583	DNA-binding transcription factor activity
FOC80_29405	COG0251	oxidation-reduction process
FOC80_29410	COG0583	DNA-binding transcription factor activity
FOC80_29450	COG0583	DNA-binding transcription factor activity
FOC80_29460	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_29465	COG0028	Belongs to the TPP enzyme family
FOC80_29470	COG1012	belongs to the aldehyde dehydrogenase family
FOC80_29475	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_29485	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
FOC80_29520	COG5383	Protein conserved in bacteria
FOC80_29525	COG0583	DNA-binding transcription factor activity
FOC80_29550	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
FOC80_29560	COG0647	UMP catabolic process
FOC80_29565	COG1737	Transcriptional regulator
FOC80_29570	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
FOC80_29575	COG0149	triose-phosphate isomerase activity
FOC80_29580	COG3321	synthase
FOC80_29580	COG0604	alcohol dehydrogenase
FOC80_29590	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FOC80_29595	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC80_29600	COG2010	Cytochrome c
FOC80_29620	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
FOC80_29645	COG2010	Cytochrome c
FOC80_29650	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
FOC80_29650	COG1648	precorrin-2 dehydrogenase activity
FOC80_29670	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FOC80_29685	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FOC80_29695	COG1185	polyribonucleotide nucleotidyltransferase activity
FOC80_29700	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
FOC80_29710	COG1183	phosphatidylcholine synthase activity
FOC80_29715	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
FOC80_29720	COG0440	acetolactate synthase activity
FOC80_29725	COG0028	Belongs to the TPP enzyme family
FOC80_29730	COG1289	transmembrane transporter activity
FOC80_29735	COG3022	response to hydroperoxide
FOC80_29740	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_29755	COG2885	chlorophyll binding
FOC80_29760	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FOC80_29765	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FOC80_29770	COG0477	Major facilitator Superfamily
FOC80_29780	COG4943	cyclic-guanylate-specific phosphodiesterase activity
FOC80_29790	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FOC80_29835	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
FOC80_29840	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
FOC80_29845	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FOC80_29855	COG0747	negative chemotaxis
FOC80_29860	COG0601	transmembrane transport
FOC80_29880	COG0517	IMP dehydrogenase activity
FOC80_29880	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
FOC80_29885	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
FOC80_29895	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
FOC80_29900	COG1674	ftsk spoiiie
FOC80_29905	COG0492	ferredoxin-NADP+ reductase activity
FOC80_29910	COG1193	negative regulation of DNA recombination
FOC80_29920	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FOC80_29935	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
FOC80_29940	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
FOC80_29945	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
FOC80_29950	COG2205	protein histidine kinase activity
FOC80_29955	COG0745	RESPONSE REGULATOR receiver
FOC80_29970	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FOC80_29975	COG0840	transmembrane signaling receptor activity
FOC80_30005	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
FOC80_30030	COG0612	Peptidase, M16
FOC80_30040	COG0484	heat shock protein binding
FOC80_30045	COG0443	Heat shock 70 kDa protein
FOC80_30055	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
FOC80_30065	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
FOC80_30070	COG1420	regulation of RNA biosynthetic process
FOC80_30080	COG0497	DNA recombination
FOC80_30085	COG0735	belongs to the Fur family
FOC80_30090	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FOC80_30125	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC80_30140	COG1012	belongs to the aldehyde dehydrogenase family
FOC80_30150	COG1063	alcohol dehydrogenase
FOC80_30155	COG4032	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
FOC80_30155	COG0028	Belongs to the TPP enzyme family
FOC80_30225	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
FOC80_30235	COG0167	dihydroorotate dehydrogenase activity
FOC80_30250	COG1414	Transcriptional regulator
FOC80_30255	COG1058	Belongs to the CinA family
FOC80_30255	COG1546	Belongs to the CinA family
FOC80_30270	COG0513	Belongs to the DEAD box helicase family
FOC80_30300	COG0429	hydrolase of the alpha beta-hydrolase fold
FOC80_30305	COG4783	chaperone-mediated protein folding
FOC80_30320	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FOC80_30325	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
FOC80_30340	COG0006	proline dipeptidase activity
FOC80_30350	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FOC80_30370	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
FOC80_30375	COG0632	four-way junction helicase activity
FOC80_30380	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FOC80_30390	COG2255	four-way junction helicase activity
FOC80_30395	COG4191	Histidine kinase
FOC80_30400	COG0745	RESPONSE REGULATOR receiver
FOC80_30410	COG0514	ATP-dependent DNA helicase (RecQ)
FOC80_30415	COG1294	oxidase, subunit
FOC80_30425	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
FOC80_30430	COG0850	regulation of cytokinetic process
FOC80_30435	COG2894	cell division
FOC80_30440	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
FOC80_30455	COG0488	(ABC) transporter
FOC80_30475	COG4608	Belongs to the ABC transporter superfamily
FOC80_30480	COG0444	Belongs to the ABC transporter superfamily
FOC80_30485	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOC80_30495	COG0747	negative chemotaxis
FOC80_30520	COG4638	Rieske (2fe-2S)
FOC80_30545	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
FOC80_30550	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_30575	COG1216	Glycosyl transferase, family 2
FOC80_30575	COG0463	Glycosyl transferase, family 2
FOC80_30600	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
FOC80_30635	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
FOC80_30640	COG1538	Outer membrane efflux protein
FOC80_30645	COG1136	(ABC) transporter
FOC80_30645	COG0577	efflux transmembrane transporter activity
FOC80_30650	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FOC80_30665	COG0259	pyridoxamine-phosphate oxidase activity
FOC80_30675	COG0579	oxidoreductase
FOC80_30685	COG0659	secondary active sulfate transmembrane transporter activity
FOC80_30690	COG0583	DNA-binding transcription factor activity
FOC80_30695	COG1960	acyl-CoA dehydrogenase activity
FOC80_30700	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_30705	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC80_30720	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_30735	COG0802	atpase or kinase
FOC80_30740	COG0860	N-Acetylmuramoyl-L-alanine amidase
FOC80_30745	COG0586	Pfam SNARE associated Golgi protein
FOC80_30750	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
FOC80_30755	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
FOC80_30760	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
FOC80_30775	COG0617	tRNA 3'-terminal CCA addition
FOC80_30785	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FOC80_30790	COG2301	Belongs to the HpcH HpaI aldolase family
FOC80_30800	COG3777	bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
FOC80_30810	COG1024	Enoyl-CoA hydratase
FOC80_30820	COG1960	acyl-CoA dehydrogenase activity
FOC80_30830	COG0183	Belongs to the thiolase family
FOC80_30835	COG0318	PFAM AMP-dependent synthetase and ligase
FOC80_30855	COG0583	DNA-binding transcription factor activity
FOC80_30860	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_30865	COG2030	dehydratase
FOC80_30870	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC80_30880	COG1024	Enoyl-CoA hydratase
FOC80_30885	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
FOC80_30905	COG0752	glycyl-tRNA synthetase alpha subunit
FOC80_30910	COG0751	glycine-tRNA ligase activity
FOC80_30915	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
FOC80_30920	COG0204	Acyl-transferase
FOC80_30940	COG0242	peptide deformylase activity
FOC80_30945	COG1960	acyl-CoA dehydrogenase activity
FOC80_30950	COG0700	Nucleoside recognition
FOC80_30955	COG0469	pyruvate kinase activity
FOC80_30960	COG1929	Belongs to the glycerate kinase type-1 family
FOC80_30965	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
FOC80_30970	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FOC80_30985	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
FOC80_31010	COG2154	pterin-4-alpha-carbinolamine dehydratase
FOC80_31045	COG2814	Major facilitator Superfamily
FOC80_31050	COG0300	oxidoreductase activity
FOC80_31070	COG0601	transmembrane transport
FOC80_31080	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
FOC80_31085	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
FOC80_31090	COG1802	Transcriptional regulator
FOC80_31100	COG1028	Short-chain dehydrogenase reductase Sdr
FOC80_31115	COG2982	Protein involved in outer membrane biogenesis
FOC80_31120	COG1368	sulfuric ester hydrolase activity
FOC80_31125	COG2818	Glycosylase
FOC80_31140	COG0735	belongs to the Fur family
FOC80_31155	COG1335	isochorismatase
FOC80_31160	COG0583	DNA-binding transcription factor activity
FOC80_31170	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FOC80_31175	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FOC80_31190	COG1250	3-hydroxyacyl-CoA dehydrogenase
FOC80_31210	COG2011	ABC-type metal ion transport system permease component
FOC80_31215	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
FOC80_31220	COG1501	Belongs to the glycosyl hydrolase 31 family
FOC80_31225	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
FOC80_31225	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FOC80_31235	COG0318	PFAM AMP-dependent synthetase and ligase
FOC80_31240	COG1473	amidohydrolase
FOC80_31250	COG2855	membrane
FOC80_31260	COG2239	Acts as a magnesium transporter
FOC80_31275	COG1522	sequence-specific DNA binding
FOC80_31285	COG0028	Belongs to the TPP enzyme family
FOC80_31290	COG3181	Tripartite tricarboxylate transporter family receptor
FOC80_31310	COG0653	protein targeting
FOC80_31315	COG0739	heme binding