locus-tag class description APT56_00005 IPR007083 RNA polymerase Rpb1, domain 4 APT56_00005 IPR006592 RNA polymerase, N-terminal APT56_00005 IPR007080 RNA polymerase Rpb1, domain 1 APT56_00005 IPR007066 RNA polymerase Rpb1, domain 3 APT56_00005 IPR042102 RNA polymerase Rpb1, domain 3 superfamily APT56_00005 IPR007081 RNA polymerase Rpb1, domain 5 APT56_00005 IPR038120 RNA polymerase Rpb1, funnel domain superfamily APT56_00005 IPR000722 RNA polymerase, alpha subunit APT56_00005 IPR012754 DNA-directed RNA polymerase, subunit beta-prime APT56_00010 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily APT56_00010 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain APT56_00010 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type APT56_00010 IPR007121 RNA polymerase, beta subunit, conserved site APT56_00010 IPR007641 RNA polymerase Rpb2, domain 7 APT56_00010 IPR007644 RNA polymerase, beta subunit, protrusion APT56_00010 IPR007642 RNA polymerase Rpb2, domain 2 APT56_00010 IPR037034 RNA polymerase Rpb2, domain 2 superfamily APT56_00010 IPR014724 RNA polymerase Rpb2, OB-fold APT56_00010 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain APT56_00010 IPR015712 DNA-directed RNA polymerase, subunit 2 APT56_00010 IPR007645 RNA polymerase Rpb2, domain 3 APT56_00015 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily APT56_00015 IPR000206 Ribosomal protein L7/L12 APT56_00015 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like APT56_00015 IPR013823 Ribosomal protein L7/L12, C-terminal APT56_00015 IPR008932 Ribosomal protein L7/L12, oligomerisation APT56_00020 IPR022973 Ribosomal protein L10 APT56_00020 IPR002363 Ribosomal protein L10, eubacterial, conserved site APT56_00020 IPR001790 Ribosomal protein L10P APT56_00025 IPR023674 Ribosomal protein L1-like APT56_00025 IPR002143 Ribosomal protein L1 APT56_00025 IPR005878 Ribosomal protein L1, bacterial-type APT56_00025 IPR023673 Ribosomal protein L1, conserved site APT56_00025 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein APT56_00025 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich APT56_00030 IPR020783 Ribosomal protein L11, C-terminal APT56_00030 IPR036769 Ribosomal protein L11, C-terminal domain superfamily APT56_00030 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily APT56_00030 IPR020785 Ribosomal protein L11, conserved site APT56_00030 IPR000911 Ribosomal protein L11/L12 APT56_00030 IPR006519 Ribosomal protein L11, bacterial-type APT56_00030 IPR020784 Ribosomal protein L11, N-terminal APT56_00035 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site APT56_00035 IPR001062 Transcription antitermination protein, NusG APT56_00035 IPR008991 Translation protein SH3-like domain superfamily APT56_00035 IPR005824 KOW APT56_00035 IPR014722 Ribosomal protein L2, domain 2 APT56_00035 IPR036735 NusG, N-terminal domain superfamily APT56_00035 IPR006645 NusG, N-terminal APT56_00040 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit APT56_00040 IPR038379 SecE superfamily APT56_00040 IPR005807 SecE subunit of protein translocation complex, bacterial-like APT56_00050 IPR005225 Small GTP-binding protein domain APT56_00050 IPR033720 Elongation factor Tu, domain 2 APT56_00050 IPR031157 Tr-type G domain, conserved site APT56_00050 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain APT56_00050 IPR000795 Transcription factor, GTP-binding domain APT56_00050 IPR009000 Translation protein, beta-barrel domain superfamily APT56_00050 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal APT56_00050 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle APT56_00050 IPR004161 Translation elongation factor EFTu-like, domain 2 APT56_00050 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal APT56_00050 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_00070 IPR018211 Alcohol dehydrogenase, iron-type, conserved site APT56_00070 IPR039697 Iron-type alcohol dehydrogenase-like APT56_00070 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA APT56_00075 IPR016160 Aldehyde dehydrogenase, cysteine active site APT56_00075 IPR016161 Aldehyde/histidinol dehydrogenase APT56_00075 IPR016163 Aldehyde dehydrogenase, C-terminal APT56_00075 IPR029510 Aldehyde dehydrogenase, glutamic acid active site APT56_00075 IPR016162 Aldehyde dehydrogenase, N-terminal APT56_00075 IPR015590 Aldehyde dehydrogenase domain APT56_00080 IPR036651 Glutamine synthetase, N-terminal domain superfamily APT56_00080 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain APT56_00080 IPR008146 Glutamine synthetase, catalytic domain APT56_00085 IPR000760 Inositol monophosphatase-like APT56_00085 IPR020550 Inositol monophosphatase, conserved site APT56_00085 IPR020583 Inositol monophosphatase, metal-binding site APT56_00085 IPR011809 Histidinol-phosphate phosphatase, putative, inositol monophosphatase APT56_00090 IPR026045 Ferric binding protein APT56_00090 IPR006311 Twin-arginine translocation pathway, signal sequence APT56_00095 IPR003439 ABC transporter-like APT56_00095 IPR017871 ABC transporter, conserved site APT56_00095 IPR017666 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT2 APT56_00095 IPR008995 Molybdate/tungstate binding, C-terminal APT56_00095 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_00095 IPR003593 AAA+ ATPase domain APT56_00095 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal APT56_00095 IPR013611 Transport-associated OB, type 2 APT56_00105 IPR037171 NagB/RpiA transferase-like APT56_00105 IPR036390 Winged helix DNA-binding domain superfamily APT56_00105 IPR014036 DeoR C-terminal sensor domain APT56_00105 IPR001034 DeoR-type HTH domain APT56_00105 IPR018356 Transcription regulator, HTH DeoR-type, conserved site APT56_00105 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_00110 IPR005064 Bordetella uptake gene APT56_00110 IPR042100 Bordetella uptake gene, domain 1 APT56_00120 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme APT56_00120 IPR006233 Cystathionine beta-lyase, bacterial APT56_00120 IPR015424 Pyridoxal phosphate-dependent transferase APT56_00120 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APT56_00120 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APT56_00130 IPR005119 LysR, substrate-binding APT56_00130 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_00130 IPR036390 Winged helix DNA-binding domain superfamily APT56_00130 IPR000847 Transcription regulator HTH, LysR APT56_00135 IPR004550 L-asparaginase, type II APT56_00135 IPR036152 Asparaginase/glutaminase-like superfamily APT56_00135 IPR040919 Asparaginase/glutaminase, C-terminal APT56_00135 IPR027473 L-asparaginase, C-terminal APT56_00135 IPR027474 L-asparaginase, N-terminal APT56_00135 IPR037152 L-asparaginase, N-terminal domain superfamily APT56_00135 IPR020827 Asparaginase/glutaminase, active site 1 APT56_00135 IPR006034 Asparaginase/glutaminase-like APT56_00135 IPR027475 Asparaginase/glutaminase, active site 2 APT56_00140 IPR041468 ParB/Spo0J, HTH domain APT56_00140 IPR004437 ParB/RepB/Spo0J partition protein APT56_00140 IPR003115 ParB/Sulfiredoxin APT56_00140 IPR036086 ParB/Sulfiredoxin superfamily APT56_00150 IPR025669 AAA domain APT56_00150 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_00155 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT56_00155 IPR003682 rRNA small subunit methyltransferase G APT56_00160 IPR036188 FAD/NAD(P)-binding domain superfamily APT56_00160 IPR026904 GidA associated domain 3 APT56_00160 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG APT56_00160 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related APT56_00160 IPR020595 MnmG-related, conserved site APT56_00165 IPR012156 Cold shock, CspA APT56_00165 IPR019844 Cold-shock (CSD) domain APT56_00165 IPR002059 Cold-shock protein, DNA-binding APT56_00165 IPR011129 Cold shock domain APT56_00165 IPR012340 Nucleic acid-binding, OB-fold APT56_00170 IPR017516 AbrB duplication APT56_00170 IPR007820 AbrB family APT56_00175 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APT56_00175 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APT56_00175 IPR015424 Pyridoxal phosphate-dependent transferase APT56_00175 IPR004839 Aminotransferase, class I/classII APT56_00180 IPR002823 Protein of unknown function DUF112, transmembrane APT56_00195 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily APT56_00195 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain APT56_00195 IPR005467 Histidine kinase domain APT56_00195 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APT56_00195 IPR003594 Histidine kinase/HSP90-like ATPase APT56_00195 IPR003660 HAMP domain APT56_00195 IPR004358 Signal transduction histidine kinase-related protein, C-terminal APT56_00200 IPR011006 CheY-like superfamily APT56_00200 IPR001867 OmpR/PhoB-type DNA-binding domain APT56_00200 IPR016032 Signal transduction response regulator, C-terminal effector APT56_00200 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_00200 IPR001789 Signal transduction response regulator, receiver domain APT56_00200 IPR039420 Transcriptional regulatory protein WalR-like APT56_00205 IPR014743 Chloride channel, core APT56_00205 IPR001807 Chloride channel, voltage gated APT56_00205 IPR023790 Chloride channel, voltage-gated, ClcB APT56_00215 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 APT56_00215 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_00215 IPR025867 MnmE, helical domain APT56_00215 IPR027368 tRNA modification GTPase MnmE domain 2 APT56_00215 IPR004520 tRNA modification GTPase MnmE APT56_00215 IPR006073 GTP binding domain APT56_00215 IPR018948 GTP-binding protein TrmE, N-terminal APT56_00215 IPR031168 TrmE-type guanine nucleotide-binding domain APT56_00215 IPR005225 Small GTP-binding protein domain APT56_00220 IPR039424 Solute-binding protein family 5 APT56_00220 IPR030678 Peptide/nickel binding protein, MppA-type APT56_00220 IPR000914 Solute-binding protein family 5 domain APT56_00220 IPR023765 Solute-binding protein family 5, conserved site APT56_00225 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_00225 IPR035906 MetI-like superfamily APT56_00230 IPR025966 Oligopeptide transport permease C-like, N-terminal domain APT56_00230 IPR035906 MetI-like superfamily APT56_00230 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_00235 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_00235 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal APT56_00235 IPR017871 ABC transporter, conserved site APT56_00235 IPR003439 ABC transporter-like APT56_00235 IPR003593 AAA+ ATPase domain APT56_00240 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal APT56_00240 IPR017871 ABC transporter, conserved site APT56_00240 IPR003439 ABC transporter-like APT56_00240 IPR003593 AAA+ ATPase domain APT56_00240 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_00245 IPR011650 Peptidase M20, dimerisation domain APT56_00245 IPR002933 Peptidase M20 APT56_00245 IPR036264 Bacterial exopeptidase dimerisation domain APT56_00245 IPR017439 Amidohydrolase APT56_00250 IPR042098 Taurine dioxygenase TauD-like superfamily APT56_00250 IPR003819 TauD/TfdA-like domain APT56_00260 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site APT56_00260 IPR005856 Cysteine synthase APT56_00260 IPR005859 Cysteine synthase CysK APT56_00260 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme APT56_00260 IPR001926 Pyridoxal-phosphate dependent enzyme APT56_00265 IPR037060 Catalase core domain superfamily APT56_00265 IPR002226 Catalase haem-binding site APT56_00265 IPR011614 Catalase core domain APT56_00265 IPR010582 Catalase immune-responsive domain APT56_00265 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 APT56_00265 IPR024708 Catalase active site APT56_00265 IPR040333 Catalase, clade 3 APT56_00265 IPR018028 Catalase, mono-functional, haem-containing APT56_00265 IPR020835 Catalase superfamily APT56_00270 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 APT56_00270 IPR038210 Membrane insertase YidC, periplasmic domain APT56_00270 IPR028053 Membrane insertase YidC, N-terminal APT56_00270 IPR038221 YidC, periplasmic domain superfamily APT56_00270 IPR019998 Membrane insertase YidC APT56_00270 IPR028055 Membrane insertase YidC/Oxa1, C-terminal APT56_00275 IPR020568 Ribosomal protein S5 domain 2-type fold APT56_00275 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APT56_00275 IPR000100 Ribonuclease P APT56_00275 IPR020539 Ribonuclease P, conserved site APT56_00280 IPR000271 Ribosomal protein L34 APT56_00280 IPR020939 Ribosomal protein L34, conserved site APT56_00285 IPR003593 AAA+ ATPase domain APT56_00285 IPR001957 Chromosomal replication control, initiator DnaA APT56_00285 IPR020591 Chromosomal replication control, initiator DnaA-like APT56_00285 IPR010921 Trp repressor/replication initiator APT56_00285 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_00285 IPR038454 DnaA, N-terminal domain superfamily APT56_00285 IPR024633 DnaA N-terminal domain APT56_00285 IPR013159 Chromosomal replication initiator, DnaA C-terminal APT56_00285 IPR013317 Chromosomal replication initiator protein DnaA APT56_00285 IPR018312 Chromosomal replication control, initiator DnaA, conserved site APT56_00290 IPR001001 DNA polymerase III, beta sliding clamp APT56_00290 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal APT56_00290 IPR022637 DNA polymerase III, beta sliding clamp, central APT56_00290 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal APT56_00295 IPR002288 DNA gyrase B subunit, C-terminal APT56_00295 IPR034160 DNA gyrase subunit B, TOPRIM domain APT56_00295 IPR011557 DNA gyrase, subunit B APT56_00295 IPR041423 DNA gyrase subunit B insert domain APT56_00295 IPR003594 Histidine kinase/HSP90-like ATPase APT56_00295 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APT56_00295 IPR020568 Ribosomal protein S5 domain 2-type fold APT56_00295 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APT56_00295 IPR001241 DNA topoisomerase, type IIA APT56_00295 IPR013760 DNA topoisomerase, type IIA-like domain superfamily APT56_00295 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 APT56_00295 IPR018522 DNA topoisomerase, type IIA, conserved site APT56_00295 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal APT56_00295 IPR006171 TOPRIM domain APT56_00300 IPR005119 LysR, substrate-binding APT56_00300 IPR000847 Transcription regulator HTH, LysR APT56_00300 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_00300 IPR036390 Winged helix DNA-binding domain superfamily APT56_00310 IPR036259 MFS transporter superfamily APT56_00310 IPR020846 Major facilitator superfamily domain APT56_00310 IPR011701 Major facilitator superfamily APT56_00315 IPR014710 RmlC-like jelly roll fold APT56_00315 IPR012093 Pirin APT56_00315 IPR011051 RmlC-like cupin domain superfamily APT56_00315 IPR003829 Pirin, N-terminal domain APT56_00315 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain APT56_00325 IPR013108 Amidohydrolase 3 APT56_00325 IPR032466 Metal-dependent hydrolase APT56_00325 IPR011059 Metal-dependent hydrolase, composite domain superfamily APT56_00325 IPR033932 YtcJ like APT56_00335 IPR036390 Winged helix DNA-binding domain superfamily APT56_00335 IPR005119 LysR, substrate-binding APT56_00335 IPR000847 Transcription regulator HTH, LysR APT56_00335 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_00335 IPR037414 Transcriptional activator protein LysR, PBP2 domain APT56_00340 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APT56_00345 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_00345 IPR030202 Glutamate/aspartate transport system permease protein GltJ/AatQ APT56_00345 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain APT56_00345 IPR035906 MetI-like superfamily APT56_00350 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain APT56_00350 IPR030205 Glutamate/aspartate transport system permease protein GltK/AatM APT56_00350 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_00350 IPR035906 MetI-like superfamily APT56_00355 IPR003593 AAA+ ATPase domain APT56_00355 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_00355 IPR017871 ABC transporter, conserved site APT56_00355 IPR003439 ABC transporter-like APT56_00355 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type APT56_00360 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase APT56_00360 IPR015424 Pyridoxal phosphate-dependent transferase APT56_00360 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APT56_00360 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APT56_00360 IPR023603 Threonine aldolase APT56_00365 IPR000620 EamA domain APT56_00370 IPR017968 Acylphosphatase, conserved site APT56_00370 IPR001792 Acylphosphatase-like domain APT56_00370 IPR020456 Acylphosphatase APT56_00370 IPR036046 Acylphosphatase-like domain superfamily APT56_00380 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site APT56_00380 IPR013785 Aldolase-type TIM barrel APT56_00380 IPR020920 L-lactate dehydrogenase, bacterial APT56_00380 IPR000262 FMN-dependent dehydrogenase APT56_00380 IPR037396 FMN hydroxy acid dehydrogenase domain APT56_00380 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent APT56_00390 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit APT56_00390 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_00390 IPR003593 AAA+ ATPase domain APT56_00390 IPR017871 ABC transporter, conserved site APT56_00390 IPR003439 ABC transporter-like APT56_00390 IPR013611 Transport-associated OB, type 2 APT56_00390 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA APT56_00390 IPR008995 Molybdate/tungstate binding, C-terminal APT56_00395 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_00395 IPR035906 MetI-like superfamily APT56_00400 IPR035906 MetI-like superfamily APT56_00400 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_00410 IPR017224 Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B APT56_00410 IPR023753 FAD/NAD(P)-binding domain APT56_00410 IPR036188 FAD/NAD(P)-binding domain superfamily APT56_00410 IPR007419 BFD-like [2Fe-2S]-binding domain APT56_00410 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily APT56_00415 IPR006076 FAD dependent oxidoreductase APT56_00415 IPR036188 FAD/NAD(P)-binding domain superfamily APT56_00415 IPR012727 Glycine oxidase ThiO APT56_00425 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain APT56_00425 IPR023514 Glyoxylate/hydroxypyruvate reductase A APT56_00425 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site APT56_00425 IPR036291 NAD(P)-binding domain superfamily APT56_00435 IPR036390 Winged helix DNA-binding domain superfamily APT56_00435 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_00435 IPR005119 LysR, substrate-binding APT56_00435 IPR000847 Transcription regulator HTH, LysR APT56_00440 IPR005064 Bordetella uptake gene APT56_00440 IPR042100 Bordetella uptake gene, domain 1 APT56_00445 IPR008040 Hydantoinaseoxoprolinase, N-terminal APT56_00445 IPR002821 Hydantoinase A/oxoprolinase APT56_00455 IPR028082 Periplasmic binding protein-like I APT56_00455 IPR000524 Transcription regulator HTH, GntR APT56_00455 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_00455 IPR036390 Winged helix DNA-binding domain superfamily APT56_00455 IPR033532 Arabinose metabolism transcriptional repressor, ligand-binding domain APT56_00465 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_00465 IPR017871 ABC transporter, conserved site APT56_00465 IPR003439 ABC transporter-like APT56_00465 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA APT56_00465 IPR003593 AAA+ ATPase domain APT56_00465 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit APT56_00465 IPR008995 Molybdate/tungstate binding, C-terminal APT56_00465 IPR013611 Transport-associated OB, type 2 APT56_00470 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_00470 IPR035906 MetI-like superfamily APT56_00475 IPR035906 MetI-like superfamily APT56_00475 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_00480 IPR036188 FAD/NAD(P)-binding domain superfamily APT56_00480 IPR006076 FAD dependent oxidoreductase APT56_00490 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily APT56_00490 IPR023753 FAD/NAD(P)-binding domain APT56_00490 IPR036188 FAD/NAD(P)-binding domain superfamily APT56_00490 IPR007419 BFD-like [2Fe-2S]-binding domain APT56_00490 IPR017224 Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B APT56_00500 IPR035709 RutC family, YoaB-like APT56_00500 IPR006175 YjgF/YER057c/UK114 family APT56_00500 IPR035959 RutC-like superfamily APT56_00500 IPR019897 RidA, conserved site APT56_00505 IPR013686 Polypeptide-transport-associated, ShlB-type APT56_00505 IPR005565 Haemolysin activator HlyB, C-terminal APT56_00505 IPR027282 Two partner secretion pathway transporter APT56_00505 IPR035251 ShlB, POTRA domain APT56_00505 IPR034746 POTRA domain APT56_00510 IPR008638 Filamentous haemagglutinin, N-terminal APT56_00510 IPR012334 Pectin lyase fold APT56_00510 IPR006914 VENN motif-containing domain APT56_00510 IPR025157 Hemagglutinin repeat APT56_00510 IPR024973 ESPR domain APT56_00510 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APT56_00510 IPR011050 Pectin lyase fold/virulence factor APT56_00515 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APT56_00515 IPR008638 Filamentous haemagglutinin, N-terminal APT56_00515 IPR025157 Hemagglutinin repeat APT56_00515 IPR011050 Pectin lyase fold/virulence factor APT56_00515 IPR028948 Bacterial toxin 28 APT56_00515 IPR006914 VENN motif-containing domain APT56_00515 IPR006626 Parallel beta-helix repeat APT56_00515 IPR012334 Pectin lyase fold APT56_00530 IPR032466 Metal-dependent hydrolase APT56_00530 IPR011059 Metal-dependent hydrolase, composite domain superfamily APT56_00530 IPR013108 Amidohydrolase 3 APT56_00550 IPR028082 Periplasmic binding protein-like I APT56_00550 IPR003760 ABC transporter substrate-binding protein PnrA-like APT56_00560 IPR003710 Ketopantoate reductase ApbA/PanE APT56_00560 IPR036291 NAD(P)-binding domain superfamily APT56_00560 IPR013332 Ketopantoate reductase, N-terminal domain APT56_00560 IPR013752 Ketopantoate reductase, C-terminal domain APT56_00560 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily APT56_00560 IPR013328 6-phosphogluconate dehydrogenase, domain 2 APT56_00575 IPR012349 FMN-binding split barrel APT56_00575 IPR002563 Flavin reductase like domain APT56_00585 IPR023772 DNA-binding HTH domain, TetR-type, conserved site APT56_00585 IPR009057 Homeobox-like domain superfamily APT56_00585 IPR001647 DNA-binding HTH domain, TetR-type APT56_00590 IPR037541 Uncharacterized MFS-type transporter YfcJ APT56_00590 IPR036259 MFS transporter superfamily APT56_00590 IPR020846 Major facilitator superfamily domain APT56_00590 IPR011701 Major facilitator superfamily APT56_00595 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB APT56_00595 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily APT56_00605 IPR021134 Bestrophin/UPF0187 APT56_00610 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain APT56_00610 IPR019888 Transcription regulator AsnC-type APT56_00610 IPR019885 Transcription regulator HTH, AsnC-type, conserved site APT56_00610 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_00610 IPR036390 Winged helix DNA-binding domain superfamily APT56_00610 IPR000485 AsnC-type HTH domain APT56_00610 IPR011008 Dimeric alpha-beta barrel APT56_00615 IPR000399 TPP-binding enzyme, conserved site APT56_00615 IPR012000 Thiamine pyrophosphate enzyme, central domain APT56_00615 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain APT56_00615 IPR029061 Thiamin diphosphate-binding fold APT56_00615 IPR012846 Acetolactate synthase, large subunit, biosynthetic APT56_00615 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding APT56_00615 IPR039368 Acetolactate synthase large subunit, TPP binding domain APT56_00615 IPR029035 DHS-like NAD/FAD-binding domain superfamily APT56_00620 IPR036291 NAD(P)-binding domain superfamily APT56_00620 IPR002347 Short-chain dehydrogenase/reductase SDR APT56_00620 IPR020904 Short-chain dehydrogenase/reductase, conserved site APT56_00625 IPR035906 MetI-like superfamily APT56_00625 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_00630 IPR015859 ABC transporter, taurine import, TauD APT56_00630 IPR017871 ABC transporter, conserved site APT56_00630 IPR003439 ABC transporter-like APT56_00630 IPR003593 AAA+ ATPase domain APT56_00630 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_00640 IPR003602 DNA topoisomerase, type IA, DNA-binding domain APT56_00640 IPR005738 DNA topoisomerase III APT56_00640 IPR006171 TOPRIM domain APT56_00640 IPR034144 DNA topoisomerase 3-like, TOPRIM domain APT56_00640 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 APT56_00640 IPR013497 DNA topoisomerase, type IA, central APT56_00640 IPR000380 DNA topoisomerase, type IA APT56_00640 IPR003601 DNA topoisomerase, type IA, domain 2 APT56_00640 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 APT56_00640 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 APT56_00640 IPR023405 DNA topoisomerase, type IA, core domain APT56_00640 IPR023406 DNA topoisomerase, type IA, active site APT56_00650 IPR000924 Glutamyl/glutaminyl-tRNA synthetase APT56_00650 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT56_00650 IPR022380 Glutamyl-Q tRNA(Asp) synthetase APT56_00650 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain APT56_00655 IPR007456 Smg APT56_00665 IPR011852 TRAP transporter solute receptor, TAXI family APT56_00670 IPR026956 D-serine dehydratase-like domain APT56_00670 IPR029066 PLP-binding barrel APT56_00670 IPR042208 D-serine dehydratase-like domain superfamily APT56_00670 IPR001608 Alanine racemase, N-terminal APT56_00675 IPR017871 ABC transporter, conserved site APT56_00675 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_00675 IPR003593 AAA+ ATPase domain APT56_00675 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type APT56_00675 IPR003439 ABC transporter-like APT56_00680 IPR035906 MetI-like superfamily APT56_00680 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_00680 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain APT56_00685 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain APT56_00685 IPR035906 MetI-like superfamily APT56_00685 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_00690 IPR001320 Ionotropic glutamate receptor APT56_00690 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter APT56_00690 IPR018313 Solute-binding protein family 3, conserved site APT56_00690 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APT56_00695 IPR005064 Bordetella uptake gene APT56_00695 IPR042100 Bordetella uptake gene, domain 1 APT56_00700 IPR004636 Acetylornithine/Succinylornithine transaminase family APT56_00700 IPR005814 Aminotransferase class-III APT56_00700 IPR015424 Pyridoxal phosphate-dependent transferase APT56_00700 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APT56_00700 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APT56_00730 IPR018062 HTH domain AraC-type, conserved site APT56_00730 IPR020449 Transcription regulator HTH, AraC- type APT56_00730 IPR002818 DJ-1/PfpI APT56_00730 IPR029062 Class I glutamine amidotransferase-like APT56_00730 IPR009057 Homeobox-like domain superfamily APT56_00730 IPR018060 DNA binding HTH domain, AraC-type APT56_00750 IPR009387 Toxin HigB-2 APT56_00755 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APT56_00755 IPR008638 Filamentous haemagglutinin, N-terminal APT56_00755 IPR025157 Hemagglutinin repeat APT56_00755 IPR012334 Pectin lyase fold APT56_00755 IPR011050 Pectin lyase fold/virulence factor APT56_00755 IPR006914 VENN motif-containing domain APT56_00755 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APT56_00755 IPR008638 Filamentous haemagglutinin, N-terminal APT56_00755 IPR006914 VENN motif-containing domain APT56_00755 IPR011050 Pectin lyase fold/virulence factor APT56_00755 IPR025157 Hemagglutinin repeat APT56_00755 IPR012334 Pectin lyase fold APT56_00765 IPR010652 Domain of unknown function DUF1232 APT56_00775 IPR001123 Amino acid exporter protein, LeuE-type APT56_00775 IPR004778 Homoserine/Threonine efflux protein APT56_00795 IPR004839 Aminotransferase, class I/classII APT56_00795 IPR036390 Winged helix DNA-binding domain superfamily APT56_00795 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_00795 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APT56_00795 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APT56_00795 IPR000524 Transcription regulator HTH, GntR APT56_00795 IPR015424 Pyridoxal phosphate-dependent transferase APT56_00810 IPR020846 Major facilitator superfamily domain APT56_00810 IPR023722 Enterobactin exporter, EntS APT56_00810 IPR036259 MFS transporter superfamily APT56_00810 IPR010290 Transmembrane secretion effector APT56_00815 IPR011054 Rudiment single hybrid motif APT56_00815 IPR005482 Biotin carboxylase, C-terminal APT56_00815 IPR011764 Biotin carboxylation domain APT56_00815 IPR016185 Pre-ATP-grasp domain superfamily APT56_00815 IPR005481 Biotin carboxylase-like, N-terminal domain APT56_00815 IPR011761 ATP-grasp fold APT56_00815 IPR001882 Biotin-binding site APT56_00815 IPR011053 Single hybrid motif APT56_00815 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain APT56_00815 IPR000089 Biotin/lipoyl attachment APT56_00820 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal APT56_00820 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal APT56_00820 IPR034733 Acetyl-CoA carboxylase APT56_00820 IPR029045 ClpP/crotonase-like domain superfamily APT56_00825 IPR020610 Thiolase, active site APT56_00825 IPR020615 Thiolase, acyl-enzyme intermediate active site APT56_00825 IPR020613 Thiolase, conserved site APT56_00825 IPR020616 Thiolase, N-terminal APT56_00825 IPR002155 Thiolase APT56_00825 IPR016039 Thiolase-like APT56_00825 IPR020617 Thiolase, C-terminal APT56_00830 IPR010452 Isocitrate dehydrogenase kinasephosphatase APT56_00835 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal APT56_00835 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily APT56_00835 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal APT56_00835 IPR006089 Acyl-CoA dehydrogenase, conserved site APT56_00835 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily APT56_00835 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain APT56_00835 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal APT56_00840 IPR002933 Peptidase M20 APT56_00840 IPR011650 Peptidase M20, dimerisation domain APT56_00840 IPR017439 Amidohydrolase APT56_00840 IPR036264 Bacterial exopeptidase dimerisation domain APT56_00845 IPR005064 Bordetella uptake gene APT56_00845 IPR042100 Bordetella uptake gene, domain 1 APT56_00855 IPR003844 Uncharacterised protein family UPF0060 APT56_00860 IPR009061 Putative DNA-binding domain superfamily APT56_00860 IPR011789 Cu(I)-responsive transcriptional regulator APT56_00860 IPR015358 Transcription regulator MerR, DNA binding APT56_00860 IPR000551 MerR-type HTH domain APT56_00870 IPR001123 Amino acid exporter protein, LeuE-type APT56_00880 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme APT56_00880 IPR006233 Cystathionine beta-lyase, bacterial APT56_00880 IPR015424 Pyridoxal phosphate-dependent transferase APT56_00880 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APT56_00880 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APT56_00885 IPR029058 Alpha/Beta hydrolase fold APT56_00885 IPR000073 Alpha/beta hydrolase fold-1 APT56_00885 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase APT56_00895 IPR013766 Thioredoxin domain APT56_00895 IPR017937 Thioredoxin, conserved site APT56_00895 IPR036249 Thioredoxin-like superfamily APT56_00895 IPR001853 DSBA-like thioredoxin domain APT56_00895 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL APT56_00905 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily APT56_00905 IPR001278 Arginine-tRNA ligase APT56_00905 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site APT56_00905 IPR035684 Arginyl-tRNA synthetase, catalytic core domain APT56_00905 IPR008909 DALR anticodon binding APT56_00905 IPR005148 Arginyl tRNA synthetase N-terminal domain APT56_00905 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding APT56_00905 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT56_00920 IPR035906 MetI-like superfamily APT56_00920 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_00925 IPR035906 MetI-like superfamily APT56_00925 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_00930 IPR006059 Bacterial extracellular solute-binding protein APT56_00930 IPR006061 Solute-binding family 1, conserved site APT56_00935 IPR003593 AAA+ ATPase domain APT56_00935 IPR008995 Molybdate/tungstate binding, C-terminal APT56_00935 IPR017922 sn-Glycerol-3-phosphate import ATP-binding protein UgpC APT56_00935 IPR003439 ABC transporter-like APT56_00935 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_00935 IPR040582 MalK, OB fold domain APT56_00935 IPR017871 ABC transporter, conserved site APT56_00940 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type APT56_00940 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA APT56_00940 IPR042283 GpdQ, catalytic alpha/beta sandwich domain APT56_00940 IPR042281 GpdQ, beta-strand dimerisation domain APT56_00945 IPR010982 Lambda repressor-like, DNA-binding domain superfamily APT56_00945 IPR000843 LacI-type HTH domain APT56_00945 IPR028082 Periplasmic binding protein-like I APT56_00950 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit APT56_00950 IPR036928 Amidase signature (AS) superfamily APT56_00950 IPR000120 Amidase APT56_00950 IPR023631 Amidase signature domain APT56_00955 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site APT56_00955 IPR000891 Pyruvate carboxyltransferase APT56_00955 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain APT56_00955 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily APT56_00955 IPR039371 LeuA, N-terminal catalytic TIM barrel domain APT56_00955 IPR005668 2-isopropylmalate synthase APT56_00955 IPR013785 Aldolase-type TIM barrel APT56_00960 IPR042100 Bordetella uptake gene, domain 1 APT56_00960 IPR005064 Bordetella uptake gene APT56_00970 IPR007634 RNA polymerase sigma factor 54, DNA-binding APT56_00970 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily APT56_00970 IPR000394 RNA polymerase sigma factor 54 APT56_00970 IPR007046 RNA polymerase sigma factor 54, core-binding domain APT56_00980 IPR036390 Winged helix DNA-binding domain superfamily APT56_00980 IPR000847 Transcription regulator HTH, LysR APT56_00980 IPR005119 LysR, substrate-binding APT56_00980 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_00990 IPR009078 Ferritin-like superfamily APT56_00990 IPR008331 Ferritin/DPS protein domain APT56_00990 IPR009040 Ferritin-like diiron domain APT56_00990 IPR012347 Ferritin-like APT56_00990 IPR002024 Bacterioferritin APT56_01000 IPR004548 Peptide chain release factor 3 APT56_01000 IPR032090 Peptide chain release factor 3, C-terminal APT56_01000 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily APT56_01000 IPR004161 Translation elongation factor EFTu-like, domain 2 APT56_01000 IPR035647 EF-G domain III/V-like APT56_01000 IPR031157 Tr-type G domain, conserved site APT56_01000 IPR041732 Peptide chain release factor 3, GTP-binding domain APT56_01000 IPR005225 Small GTP-binding protein domain APT56_01000 IPR000795 Transcription factor, GTP-binding domain APT56_01000 IPR009000 Translation protein, beta-barrel domain superfamily APT56_01000 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_01005 IPR004778 Homoserine/Threonine efflux protein APT56_01005 IPR001123 Amino acid exporter protein, LeuE-type APT56_01010 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_01010 IPR014014 RNA helicase, DEAD-box type, Q motif APT56_01010 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site APT56_01010 IPR001650 Helicase, C-terminal APT56_01010 IPR014001 Helicase superfamily 1/2, ATP-binding domain APT56_01010 IPR011545 DEAD/DEAH box helicase domain APT56_01010 IPR028622 ATP-dependent RNA helicase RhlE APT56_01015 IPR010352 Protein of unknown function DUF945 APT56_01020 IPR010352 Protein of unknown function DUF945 APT56_01025 IPR006680 Amidohydrolase-related APT56_01025 IPR032466 Metal-dependent hydrolase APT56_01025 IPR011059 Metal-dependent hydrolase, composite domain superfamily APT56_01025 IPR005920 Imidazolonepropionase APT56_01030 IPR017871 ABC transporter, conserved site APT56_01030 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal APT56_01030 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_01030 IPR003593 AAA+ ATPase domain APT56_01030 IPR003439 ABC transporter-like APT56_01035 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_01035 IPR035906 MetI-like superfamily APT56_01035 IPR025966 Oligopeptide transport permease C-like, N-terminal domain APT56_01045 IPR030678 Peptide/nickel binding protein, MppA-type APT56_01045 IPR000914 Solute-binding protein family 5 domain APT56_01045 IPR023765 Solute-binding protein family 5, conserved site APT56_01045 IPR039424 Solute-binding protein family 5 APT56_01050 IPR030393 EngB-type guanine nucleotide-binding (G) domain APT56_01050 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC APT56_01050 IPR006073 GTP binding domain APT56_01050 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_01060 IPR018060 DNA binding HTH domain, AraC-type APT56_01060 IPR018062 HTH domain AraC-type, conserved site APT56_01060 IPR029442 GyrI-like small molecule binding domain APT56_01060 IPR010499 Bacterial transcription activator, effector binding APT56_01060 IPR011256 Regulatory factor, effector binding domain superfamily APT56_01060 IPR020449 Transcription regulator HTH, AraC- type APT56_01060 IPR009057 Homeobox-like domain superfamily APT56_01070 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site APT56_01070 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APT56_01070 IPR000192 Aminotransferase class V domain APT56_01070 IPR010970 Cysteine desulfurase, SufS APT56_01070 IPR015424 Pyridoxal phosphate-dependent transferase APT56_01070 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APT56_01080 IPR005119 LysR, substrate-binding APT56_01080 IPR036390 Winged helix DNA-binding domain superfamily APT56_01080 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_01080 IPR000847 Transcription regulator HTH, LysR APT56_01095 IPR003474 Gluconate transporter APT56_01100 IPR001123 Amino acid exporter protein, LeuE-type APT56_01125 IPR036760 SspB-like superfamily APT56_01125 IPR007481 Stringent starvation protein B APT56_01130 IPR036282 Glutathione S-transferase, C-terminal domain superfamily APT56_01130 IPR034341 Stringent starvation protein A, N-terminal APT56_01130 IPR036249 Thioredoxin-like superfamily APT56_01130 IPR010987 Glutathione S-transferase, C-terminal-like APT56_01130 IPR004046 Glutathione S-transferase, C-terminal APT56_01130 IPR004045 Glutathione S-transferase, N-terminal APT56_01130 IPR040079 Glutathione Transferase family APT56_01135 IPR002326 Cytochrome c1 APT56_01135 IPR036909 Cytochrome c-like domain superfamily APT56_01135 IPR009056 Cytochrome c-like domain APT56_01140 IPR005797 Cytochrome b/b6, N-terminal APT56_01140 IPR016174 Di-haem cytochrome, transmembrane APT56_01140 IPR005798 Cytochrome b/b6, C-terminal APT56_01140 IPR036150 Cytochrome b/b6, C-terminal domain superfamily APT56_01140 IPR030689 Cytochrome b APT56_01140 IPR027387 Cytochrome b/b6-like domain superfamily APT56_01145 IPR017941 Rieske [2Fe-2S] iron-sulphur domain APT56_01145 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily APT56_01145 IPR005805 Rieske iron-sulphur protein, C-terminal APT56_01145 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal APT56_01145 IPR014349 Rieske iron-sulphur protein APT56_01145 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit APT56_01150 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L APT56_01150 IPR036019 Gated mechanosensitive channel APT56_01150 IPR001185 Large-conductance mechanosensitive channel APT56_01155 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily APT56_01155 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 APT56_01160 IPR011782 Peptidase S1C, Do APT56_01160 IPR036034 PDZ superfamily APT56_01160 IPR009003 Peptidase S1, PA clan APT56_01160 IPR001940 Peptidase S1C APT56_01160 IPR001478 PDZ domain APT56_01170 IPR019820 Sec-independent periplasmic protein translocase, conserved site APT56_01170 IPR002033 Sec-independent periplasmic protein translocase TatC APT56_01175 IPR018448 Twin-arginine translocation protein TatB APT56_01175 IPR003369 Sec-independent protein translocase protein TatA/B/E APT56_01180 IPR003369 Sec-independent protein translocase protein TatA/B/E APT56_01180 IPR006312 Sec-independent protein translocase protein TatA/E APT56_01185 IPR001310 Histidine triad (HIT) protein APT56_01185 IPR011146 HIT-like domain APT56_01185 IPR019808 Histidine triad, conserved site APT56_01185 IPR036265 HIT-like superfamily APT56_01190 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase APT56_01190 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like APT56_01195 IPR026660 Phosphoribosyl-AMP cyclohydrolase APT56_01195 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily APT56_01195 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain APT56_01200 IPR011060 Ribulose-phosphate binding barrel APT56_01200 IPR004651 Histidine biosynthesis, HisF APT56_01200 IPR006062 Histidine biosynthesis APT56_01200 IPR013785 Aldolase-type TIM barrel APT56_01205 IPR013785 Aldolase-type TIM barrel APT56_01205 IPR006062 Histidine biosynthesis APT56_01205 IPR011060 Ribulose-phosphate binding barrel APT56_01205 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA APT56_01205 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase APT56_01210 IPR029062 Class I glutamine amidotransferase-like APT56_01210 IPR017926 Glutamine amidotransferase APT56_01210 IPR010139 Imidazole glycerol phosphate synthase, subunit H APT56_01215 IPR000807 Imidazoleglycerol-phosphate dehydratase APT56_01215 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily APT56_01215 IPR020568 Ribosomal protein S5 domain 2-type fold APT56_01215 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site APT56_01220 IPR005861 Histidinol-phosphate aminotransferase family APT56_01220 IPR015424 Pyridoxal phosphate-dependent transferase APT56_01220 IPR004839 Aminotransferase, class I/classII APT56_01220 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APT56_01220 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APT56_01225 IPR001692 Histidinol dehydrogenase, conserved site APT56_01225 IPR022695 Histidinol dehydrogenase, monofunctional APT56_01225 IPR016161 Aldehyde/histidinol dehydrogenase APT56_01225 IPR012131 Histidinol dehydrogenase APT56_01230 IPR018198 ATP phosphoribosyltransferase, conserved site APT56_01230 IPR024893 ATP phosphoribosyltransferase HisG, short form APT56_01230 IPR013820 ATP phosphoribosyltransferase, catalytic domain APT56_01230 IPR001348 ATP phosphoribosyltransferase HisG APT56_01235 IPR036968 Enolpyruvate transferase domain superfamily APT56_01235 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta APT56_01235 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase APT56_01235 IPR001986 Enolpyruvate transferase domain APT56_01245 IPR000412 ABC-2 transporter APT56_01245 IPR013525 ABC-2 type transporter APT56_01250 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_01250 IPR003593 AAA+ ATPase domain APT56_01250 IPR017871 ABC transporter, conserved site APT56_01250 IPR003439 ABC transporter-like APT56_01260 IPR007428 MlaA lipoprotein APT56_01265 IPR003399 Mce/MlaD APT56_01265 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD APT56_01270 IPR003453 ABC transport permease subunit MlaE, Proteobacteria APT56_01270 IPR030802 ABC transporter permease MalE APT56_01275 IPR017871 ABC transporter, conserved site APT56_01275 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl APT56_01275 IPR003593 AAA+ ATPase domain APT56_01275 IPR003439 ABC transporter-like APT56_01275 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_01280 IPR013785 Aldolase-type TIM barrel APT56_01280 IPR004136 Nitronate monooxygenase APT56_01285 IPR005064 Bordetella uptake gene APT56_01285 IPR042100 Bordetella uptake gene, domain 1 APT56_01290 IPR010645 Uncharacterised MFS-type transporter YbfB APT56_01290 IPR036259 MFS transporter superfamily APT56_01295 IPR036390 Winged helix DNA-binding domain superfamily APT56_01295 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_01295 IPR000847 Transcription regulator HTH, LysR APT56_01295 IPR005119 LysR, substrate-binding APT56_01300 IPR005618 Outer membrane protein, OmpW APT56_01300 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel APT56_01305 IPR037403 HTH-type transcriptional regulator CynR, PBP2 domain APT56_01305 IPR005119 LysR, substrate-binding APT56_01305 IPR036390 Winged helix DNA-binding domain superfamily APT56_01305 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_01305 IPR000847 Transcription regulator HTH, LysR APT56_01310 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel APT56_01310 IPR005501 LamB/YcsF/PxpA-like APT56_01315 IPR001249 Acetyl-CoA biotin carboxyl carrier APT56_01315 IPR001882 Biotin-binding site APT56_01315 IPR000089 Biotin/lipoyl attachment APT56_01315 IPR011053 Single hybrid motif APT56_01320 IPR016185 Pre-ATP-grasp domain superfamily APT56_01320 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain APT56_01320 IPR011054 Rudiment single hybrid motif APT56_01320 IPR005482 Biotin carboxylase, C-terminal APT56_01320 IPR011764 Biotin carboxylation domain APT56_01320 IPR005481 Biotin carboxylase-like, N-terminal domain APT56_01320 IPR013815 ATP-grasp fold, subdomain 1 APT56_01320 IPR011761 ATP-grasp fold APT56_01320 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase APT56_01330 IPR003778 Carboxyltransferase domain, subdomain A and B APT56_01330 IPR029000 Cyclophilin-like domain superfamily APT56_01345 IPR014047 Chromate transporter, long chain APT56_01345 IPR003370 Chromate transporter APT56_01350 IPR023753 FAD/NAD(P)-binding domain APT56_01350 IPR036188 FAD/NAD(P)-binding domain superfamily APT56_01350 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 APT56_01350 IPR009051 Alpha-helical ferredoxin APT56_01350 IPR028261 Dihydroprymidine dehydrogenase domain II APT56_01355 IPR013785 Aldolase-type TIM barrel APT56_01355 IPR002932 Glutamate synthase domain APT56_01355 IPR017932 Glutamine amidotransferase type 2 domain APT56_01355 IPR002489 Glutamate synthase, alpha subunit, C-terminal APT56_01355 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily APT56_01355 IPR006982 Glutamate synthase, central-N APT56_01355 IPR029055 Nucleophile aminohydrolases, N-terminal APT56_01365 IPR029058 Alpha/Beta hydrolase fold APT56_01365 IPR014186 S-formylglutathione hydrolase APT56_01365 IPR000801 Putative esterase APT56_01375 IPR014284 RNA polymerase sigma-70 like domain APT56_01375 IPR000943 RNA polymerase sigma-70 APT56_01375 IPR007627 RNA polymerase sigma-70 region 2 APT56_01375 IPR009042 RNA polymerase sigma-70 region 1.2 APT56_01375 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria APT56_01375 IPR013324 RNA polymerase sigma factor, region 3/4-like APT56_01375 IPR013325 RNA polymerase sigma factor, region 2 APT56_01375 IPR007630 RNA polymerase sigma-70 region 4 APT56_01380 IPR029052 Metallo-dependent phosphatase-like APT56_01380 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA APT56_01380 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type APT56_01385 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria APT56_01385 IPR038770 Sodium/solute symporter superfamily APT56_01385 IPR006153 Cation/H+ exchanger APT56_01385 IPR018422 Cation/H+ exchanger, CPA1 family APT56_01395 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain APT56_01395 IPR001505 Copper centre Cu(A) APT56_01395 IPR008972 Cupredoxin APT56_01395 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily APT56_01395 IPR014222 Cytochrome c oxidase, subunit II APT56_01395 IPR002429 Cytochrome c oxidase subunit II-like C-terminal APT56_01400 IPR023616 Cytochrome c oxidase-like, subunit I domain APT56_01400 IPR014241 Cytochrome c oxidase, subunit I bacterial type APT56_01400 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site APT56_01400 IPR033944 Cytochrome c oxidase subunit I domain APT56_01400 IPR000883 Cytochrome c oxidase subunit I APT56_01400 IPR036927 Cytochrome c oxidase-like, subunit I superfamily APT56_01410 IPR035973 Cytochrome c oxidase subunit III-like superfamily APT56_01410 IPR024791 Cytochrome c oxidase subunit III APT56_01410 IPR000298 Cytochrome c oxidase subunit III-like APT56_01410 IPR033945 Cytochrome c oxidase subunit III domain APT56_01410 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle APT56_01430 IPR003780 COX15/CtaA family APT56_01430 IPR023755 Heme A synthase, type 1 APT56_01435 IPR006369 Protohaem IX farnesyltransferase APT56_01435 IPR000537 UbiA prenyltransferase family APT56_01440 IPR036249 Thioredoxin-like superfamily APT56_01440 IPR003782 Copper chaperone SCO1/SenC APT56_01460 IPR038009 GlmU, C-terminal LbH domain APT56_01460 IPR011004 Trimeric LpxA-like superfamily APT56_01460 IPR029044 Nucleotide-diphospho-sugar transferases APT56_01460 IPR025877 MobA-like NTP transferase APT56_01460 IPR018357 Hexapeptide transferase, conserved site APT56_01460 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase APT56_01460 IPR001451 Hexapeptide repeat APT56_01465 IPR036259 MFS transporter superfamily APT56_01465 IPR011701 Major facilitator superfamily APT56_01465 IPR020846 Major facilitator superfamily domain APT56_01470 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation APT56_01470 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily APT56_01470 IPR017476 UDP-glucose/GDP-mannose dehydrogenase APT56_01470 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily APT56_01470 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal APT56_01470 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type APT56_01470 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal APT56_01470 IPR036291 NAD(P)-binding domain superfamily APT56_01485 IPR035466 GlmS/AgaS, SIS domain 1 APT56_01485 IPR035490 GlmS/FrlB, SIS domain 2 APT56_01485 IPR017932 Glutamine amidotransferase type 2 domain APT56_01485 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising APT56_01485 IPR001347 Sugar isomerase (SIS) APT56_01485 IPR029055 Nucleophile aminohydrolases, N-terminal APT56_01490 IPR017813 Mycothiol acetyltransferase APT56_01490 IPR000182 GNAT domain APT56_01490 IPR016181 Acyl-CoA N-acyltransferase APT56_01505 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal APT56_01505 IPR006276 Cobalamin-independent methionine synthase APT56_01505 IPR038071 UROD/MetE-like superfamily APT56_01505 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal APT56_01510 IPR012349 FMN-binding split barrel APT56_01510 IPR002563 Flavin reductase like domain APT56_01530 IPR030374 Polyamine biosynthesis domain APT56_01530 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT56_01530 IPR001045 Spermidine/spermine synthases APT56_01530 IPR037163 Spermidine synthase, tetramerisation domain superfamily APT56_01530 IPR035246 Spermidine synthase, tetramerisation domain APT56_01540 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily APT56_01540 IPR005288 L-aspartate oxidase APT56_01540 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal APT56_01540 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain APT56_01540 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily APT56_01540 IPR036188 FAD/NAD(P)-binding domain superfamily APT56_01545 IPR023513 Quinolinate synthase A, type 1 APT56_01545 IPR003473 Quinolinate synthetase A APT56_01545 IPR036094 Quinolinate synthetase A superfamily APT56_01550 IPR036259 MFS transporter superfamily APT56_01550 IPR011701 Major facilitator superfamily APT56_01550 IPR020846 Major facilitator superfamily domain APT56_01555 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_01555 IPR005119 LysR, substrate-binding APT56_01555 IPR000847 Transcription regulator HTH, LysR APT56_01555 IPR036390 Winged helix DNA-binding domain superfamily APT56_01560 IPR003462 Ornithine cyclodeaminase/mu-crystallin APT56_01560 IPR023401 Ornithine cyclodeaminase, N-terminal APT56_01560 IPR036291 NAD(P)-binding domain superfamily APT56_01565 IPR035919 EAL domain superfamily APT56_01565 IPR013656 PAS fold-4 APT56_01565 IPR035965 PAS domain superfamily APT56_01565 IPR001633 EAL domain APT56_01565 IPR000700 PAS-associated, C-terminal APT56_01565 IPR000014 PAS domain APT56_01565 IPR013655 PAS fold-3 APT56_01565 IPR000160 GGDEF domain APT56_01565 IPR001610 PAC motif APT56_01565 IPR029787 Nucleotide cyclase APT56_01570 IPR006073 GTP binding domain APT56_01570 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_01570 IPR030393 EngB-type guanine nucleotide-binding (G) domain APT56_01570 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC APT56_01575 IPR003700 Ketopantoate hydroxymethyltransferase APT56_01575 IPR040442 Pyruvate kinase-like domain superfamily APT56_01575 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily APT56_01580 IPR036390 Winged helix DNA-binding domain superfamily APT56_01580 IPR005119 LysR, substrate-binding APT56_01580 IPR000847 Transcription regulator HTH, LysR APT56_01580 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_01585 IPR038377 Sodium/glucose symporter superfamily APT56_01585 IPR011851 Sodium/proline symporter APT56_01585 IPR001734 Sodium/solute symporter APT56_01585 IPR018212 Sodium/solute symporter, conserved site APT56_01590 IPR005925 Agmatinase-related APT56_01590 IPR006035 Ureohydrolase APT56_01590 IPR023696 Ureohydrolase domain superfamily APT56_01590 IPR020855 Ureohydrolase, manganese-binding site APT56_01595 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase APT56_01595 IPR003342 Glycosyl transferase family 39/83 APT56_01600 IPR029044 Nucleotide-diphospho-sugar transferases APT56_01600 IPR001173 Glycosyltransferase 2-like APT56_01605 IPR001036 Acriflavin resistance protein APT56_01605 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APT56_01605 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA APT56_01610 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APT56_01610 IPR006143 RND efflux pump, membrane fusion protein APT56_01610 IPR005695 Cobalt/zinc/cadmium resistance protein CzcB APT56_01615 IPR003423 Outer membrane efflux protein APT56_01625 IPR001789 Signal transduction response regulator, receiver domain APT56_01625 IPR039420 Transcriptional regulatory protein WalR-like APT56_01625 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_01625 IPR011006 CheY-like superfamily APT56_01625 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response APT56_01625 IPR001867 OmpR/PhoB-type DNA-binding domain APT56_01630 IPR006290 Heavy metal sensor kinase APT56_01630 IPR003660 HAMP domain APT56_01630 IPR003594 Histidine kinase/HSP90-like ATPase APT56_01630 IPR004358 Signal transduction histidine kinase-related protein, C-terminal APT56_01630 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily APT56_01630 IPR005467 Histidine kinase domain APT56_01630 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain APT56_01630 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APT56_01640 IPR008334 5'-Nucleotidase, C-terminal APT56_01640 IPR006179 5'-Nucleotidase/apyrase APT56_01640 IPR006146 5'-Nucleotidase, conserved site APT56_01640 IPR029052 Metallo-dependent phosphatase-like APT56_01640 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type APT56_01640 IPR036907 5'-Nucleotidase, C-terminal domain superfamily APT56_01640 IPR006420 NAD pyrophosphatase/5-nucleotidase NadN APT56_01645 IPR011032 GroES-like superfamily APT56_01645 IPR036291 NAD(P)-binding domain superfamily APT56_01645 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site APT56_01645 IPR014183 Alcohol dehydrogenase class III APT56_01645 IPR013154 Alcohol dehydrogenase, N-terminal APT56_01645 IPR020843 Polyketide synthase, enoylreductase domain APT56_01645 IPR013149 Alcohol dehydrogenase, C-terminal APT56_01650 IPR038390 Metal-sensitive transcriptional repressor superfamily APT56_01650 IPR003735 Metal-sensitive transcriptional repressor APT56_01655 IPR010248 Histidine utilization repressor APT56_01655 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily APT56_01655 IPR036390 Winged helix DNA-binding domain superfamily APT56_01655 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_01655 IPR011663 UbiC transcription regulator-associated APT56_01655 IPR000524 Transcription regulator HTH, GntR APT56_01660 IPR011051 RmlC-like cupin domain superfamily APT56_01660 IPR014710 RmlC-like jelly roll fold APT56_01660 IPR010282 Uncharacterised protein family HutD/Ves APT56_01665 IPR035401 Urocanase, C-terminal domain APT56_01665 IPR035400 Urocanase, N-terminal domain APT56_01665 IPR038364 Urocanase, central domain superfamily APT56_01665 IPR035085 Urocanase, Rossmann-like domain APT56_01665 IPR036190 Urocanase superfamily APT56_01665 IPR023636 Urocanase conserved site APT56_01665 IPR023637 Urocanase APT56_01670 IPR001248 Purine-cytosine permease APT56_01670 IPR038271 Purine-cytosine permease superfamily APT56_01670 IPR026030 Purine-cytosine permease Fcy2/21/22 APT56_01675 IPR022313 Phenylalanine/histidine ammonia-lyases, active site APT56_01675 IPR001106 Aromatic amino acid lyase APT56_01675 IPR008948 L-Aspartase-like APT56_01675 IPR024083 Fumarase/histidase, N-terminal APT56_01675 IPR005921 Histidine ammonia-lyase APT56_01680 IPR004841 Amino acid permease/ SLC12A domain APT56_01680 IPR004840 Amino acid permease, conserved site APT56_01685 IPR005920 Imidazolonepropionase APT56_01685 IPR006680 Amidohydrolase-related APT56_01685 IPR011059 Metal-dependent hydrolase, composite domain superfamily APT56_01685 IPR032466 Metal-dependent hydrolase APT56_01690 IPR004090 Chemotaxis methyl-accepting receptor APT56_01690 IPR003660 HAMP domain APT56_01690 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain APT56_01690 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding APT56_01690 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site APT56_01690 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily APT56_01695 IPR011701 Major facilitator superfamily APT56_01695 IPR036259 MFS transporter superfamily APT56_01695 IPR020846 Major facilitator superfamily domain APT56_01710 IPR018030 Fimbrial membrane usher, conserved site APT56_01710 IPR025949 PapC-like, C-terminal domain APT56_01710 IPR025885 PapC, N-terminal domain APT56_01710 IPR037224 PapC, N-terminal domain superfamily APT56_01710 IPR000015 Outer membrane usher protein APT56_01710 IPR042186 Outer membrane usher protein FimD, plug domain APT56_01770 IPR011711 GntR, C-terminal APT56_01770 IPR036390 Winged helix DNA-binding domain superfamily APT56_01770 IPR000485 AsnC-type HTH domain APT56_01770 IPR008920 Transcription regulator FadR/GntR, C-terminal APT56_01770 IPR000524 Transcription regulator HTH, GntR APT56_01770 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_01785 IPR016160 Aldehyde dehydrogenase, cysteine active site APT56_01785 IPR015590 Aldehyde dehydrogenase domain APT56_01785 IPR016162 Aldehyde dehydrogenase, N-terminal APT56_01785 IPR016161 Aldehyde/histidinol dehydrogenase APT56_01785 IPR029510 Aldehyde dehydrogenase, glutamic acid active site APT56_01785 IPR016163 Aldehyde dehydrogenase, C-terminal APT56_01795 IPR001433 Oxidoreductase FAD/NAD(P)-binding APT56_01795 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain APT56_01795 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain APT56_01795 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase APT56_01795 IPR017927 FAD-binding domain, ferredoxin reductase-type APT56_01795 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site APT56_01795 IPR036010 2Fe-2S ferredoxin-like superfamily APT56_01795 IPR012675 Beta-grasp domain superfamily APT56_01795 IPR017938 Riboflavin synthase-like beta-barrel APT56_01795 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain APT56_01800 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT56_01800 IPR006015 Universal stress protein A family APT56_01800 IPR006016 UspA APT56_01805 IPR017871 ABC transporter, conserved site APT56_01805 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_01805 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal APT56_01805 IPR003593 AAA+ ATPase domain APT56_01805 IPR003439 ABC transporter-like APT56_01810 IPR025966 Oligopeptide transport permease C-like, N-terminal domain APT56_01810 IPR035906 MetI-like superfamily APT56_01810 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_01815 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_01815 IPR035906 MetI-like superfamily APT56_01820 IPR030678 Peptide/nickel binding protein, MppA-type APT56_01820 IPR039424 Solute-binding protein family 5 APT56_01820 IPR000914 Solute-binding protein family 5 domain APT56_01830 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal APT56_01830 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal APT56_01830 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily APT56_01830 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily APT56_01830 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain APT56_01835 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily APT56_01835 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily APT56_01835 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal APT56_01835 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain APT56_01835 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal APT56_01840 IPR011251 Luciferase-like domain APT56_01840 IPR036661 Luciferase-like domain superfamily APT56_01840 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A APT56_01845 IPR004872 Lipoprotein NlpA family APT56_01850 IPR029039 Flavoprotein-like superfamily APT56_01850 IPR005025 NADPH-dependent FMN reductase-like APT56_01850 IPR020048 NADPH-dependent FMN reductase, SsuE APT56_01855 IPR015168 SsuA/THI5-like APT56_01855 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APT56_01855 IPR010067 Aliphatic sulfonates-binding protein APT56_01860 IPR036661 Luciferase-like domain superfamily APT56_01860 IPR011251 Luciferase-like domain APT56_01860 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent APT56_01865 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_01865 IPR035906 MetI-like superfamily APT56_01870 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily APT56_01870 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal APT56_01870 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily APT56_01870 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain APT56_01870 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal APT56_01875 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria APT56_01875 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain APT56_01875 IPR018449 NIL domain APT56_01875 IPR003593 AAA+ ATPase domain APT56_01875 IPR003439 ABC transporter-like APT56_01875 IPR017871 ABC transporter, conserved site APT56_01875 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal APT56_01875 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_01875 IPR026253 Methionine import ATP-binding protein MetN APT56_01880 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_01880 IPR035906 MetI-like superfamily APT56_01885 IPR004872 Lipoprotein NlpA family APT56_01890 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB APT56_01890 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_01890 IPR017871 ABC transporter, conserved site APT56_01890 IPR003593 AAA+ ATPase domain APT56_01890 IPR003439 ABC transporter-like APT56_01895 IPR008995 Molybdate/tungstate binding, C-terminal APT56_01895 IPR004606 Molybdenum-pterin binding APT56_01895 IPR005116 Transport-associated OB, type 1 APT56_01915 IPR006683 Thioesterase domain APT56_01915 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain APT56_01915 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase APT56_01915 IPR029069 HotDog domain superfamily APT56_01925 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site APT56_01925 IPR006311 Twin-arginine translocation pathway, signal sequence APT56_01925 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site APT56_01925 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain APT56_01925 IPR006656 Molybdopterin oxidoreductase APT56_01925 IPR006657 Molybdopterin dinucleotide-binding domain APT56_01925 IPR006443 Formate dehydrogenase-N, alpha subunit APT56_01925 IPR009010 Aspartate decarboxylase-like domain superfamily APT56_01930 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site APT56_01930 IPR006311 Twin-arginine translocation pathway, signal sequence APT56_01930 IPR006443 Formate dehydrogenase-N, alpha subunit APT56_01930 IPR009010 Aspartate decarboxylase-like domain superfamily APT56_01930 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site APT56_01930 IPR006656 Molybdopterin oxidoreductase APT56_01930 IPR006657 Molybdopterin dinucleotide-binding domain APT56_01930 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain APT56_01935 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria APT56_01935 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APT56_01935 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APT56_01935 IPR038384 Formate dehydrogenase, C-terminal domain superfamily APT56_01935 IPR014603 Formate dehydrogenase iron-sulphur subunit APT56_01935 IPR015246 Formate dehydrogenase, transmembrane APT56_01940 IPR006471 Formate dehydrogenase, gamma subunit APT56_01940 IPR016174 Di-haem cytochrome, transmembrane APT56_01940 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase APT56_01945 IPR006452 Formate dehydrogenase accessory protein APT56_01945 IPR024064 FdhE-like superfamily APT56_01950 IPR004534 L-seryl-tRNA(Sec) selenium transferase APT56_01950 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain APT56_01950 IPR015424 Pyridoxal phosphate-dependent transferase APT56_01950 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APT56_01950 IPR018319 L-seryl-tRNA selenium transferase-like APT56_01955 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal APT56_01955 IPR015190 Translation elongation factor SelB, winged helix, type 2 APT56_01955 IPR004535 Translation elongation factor, selenocysteine-specific APT56_01955 IPR031157 Tr-type G domain, conserved site APT56_01955 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_01955 IPR000795 Transcription factor, GTP-binding domain APT56_01955 IPR036390 Winged helix DNA-binding domain superfamily APT56_01955 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_01955 IPR009000 Translation protein, beta-barrel domain superfamily APT56_01955 IPR004161 Translation elongation factor EFTu-like, domain 2 APT56_01955 IPR015191 Translation elongation factor SelB, winged helix, type 3 APT56_01965 IPR001173 Glycosyltransferase 2-like APT56_01965 IPR029044 Nucleotide-diphospho-sugar transferases APT56_01970 IPR013766 Thioredoxin domain APT56_01970 IPR036249 Thioredoxin-like superfamily APT56_01970 IPR023555 Thiol-disulphide oxidoreductase ResA APT56_01970 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant APT56_01975 IPR038765 Papain-like cysteine peptidase superfamily APT56_01975 IPR002931 Transglutaminase-like APT56_01980 IPR036921 PurM-like, N-terminal domain superfamily APT56_01980 IPR023061 Selenophosphate synthetase, class I APT56_01980 IPR016188 PurM-like, N-terminal domain APT56_01980 IPR036676 PurM-like, C-terminal domain superfamily APT56_01980 IPR010918 PurM-like, C-terminal domain APT56_01980 IPR004536 Selenophosphate synthetase APT56_01990 IPR037420 HTH-type transcriptional activator AmpR, PBP2 APT56_01990 IPR036390 Winged helix DNA-binding domain superfamily APT56_01990 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_01990 IPR000847 Transcription regulator HTH, LysR APT56_01990 IPR005119 LysR, substrate-binding APT56_02000 IPR001853 DSBA-like thioredoxin domain APT56_02000 IPR014440 HCCA isomerase/glutathione S-transferase kappa APT56_02000 IPR036249 Thioredoxin-like superfamily APT56_02010 IPR016162 Aldehyde dehydrogenase, N-terminal APT56_02010 IPR029510 Aldehyde dehydrogenase, glutamic acid active site APT56_02010 IPR016161 Aldehyde/histidinol dehydrogenase APT56_02010 IPR016160 Aldehyde dehydrogenase, cysteine active site APT56_02010 IPR016163 Aldehyde dehydrogenase, C-terminal APT56_02010 IPR015590 Aldehyde dehydrogenase domain APT56_02015 IPR002197 DNA binding HTH domain, Fis-type APT56_02015 IPR002078 RNA polymerase sigma factor 54 interaction domain APT56_02015 IPR029016 GAF-like domain superfamily APT56_02015 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 APT56_02015 IPR003018 GAF domain APT56_02015 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 APT56_02015 IPR025944 Sigma-54 interaction domain, conserved site APT56_02015 IPR003593 AAA+ ATPase domain APT56_02015 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_02015 IPR009057 Homeobox-like domain superfamily APT56_02020 IPR013798 Indole-3-glycerol phosphate synthase APT56_02020 IPR011060 Ribulose-phosphate binding barrel APT56_02020 IPR001468 Indole-3-glycerol phosphate synthase, conserved site APT56_02020 IPR013785 Aldolase-type TIM barrel APT56_02025 IPR000312 Glycosyl transferase, family 3 APT56_02025 IPR005940 Anthranilate phosphoribosyl transferase APT56_02025 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily APT56_02025 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily APT56_02025 IPR017459 Glycosyl transferase family 3, N-terminal domain APT56_02030 IPR029062 Class I glutamine amidotransferase-like APT56_02030 IPR017926 Glutamine amidotransferase APT56_02030 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain APT56_02035 IPR005801 ADC synthase APT56_02035 IPR019999 Anthranilate synthase component I-like APT56_02035 IPR005256 Anthranilate synthase component I, PabB-like APT56_02035 IPR015890 Chorismate-utilising enzyme, C-terminal APT56_02035 IPR006805 Anthranilate synthase component I, N-terminal APT56_02040 IPR036412 HAD-like superfamily APT56_02040 IPR006439 HAD hydrolase, subfamily IA APT56_02040 IPR041492 Haloacid dehalogenase-like hydrolase APT56_02040 IPR023214 HAD superfamily APT56_02040 IPR037512 Phosphoglycolate phosphatase, prokaryotic APT56_02040 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic APT56_02040 IPR023198 Phosphoglycolate phosphatase-like, domain 2 APT56_02050 IPR007474 ApaG domain APT56_02050 IPR036767 ApaG domain superfamily APT56_02050 IPR023065 Uncharacterised protein family ApaG APT56_02060 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site APT56_02060 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 APT56_02060 IPR036188 FAD/NAD(P)-binding domain superfamily APT56_02060 IPR002938 FAD-binding domain APT56_02065 IPR033954 Disulphide bond isomerase, DsbC/G APT56_02065 IPR012336 Thioredoxin-like fold APT56_02065 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal APT56_02065 IPR036249 Thioredoxin-like superfamily APT56_02065 IPR017937 Thioredoxin, conserved site APT56_02070 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain APT56_02070 IPR006236 D-3-phosphoglycerate dehydrogenase APT56_02070 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain APT56_02070 IPR036291 NAD(P)-binding domain superfamily APT56_02070 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 APT56_02070 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site APT56_02070 IPR002912 ACT domain APT56_02070 IPR029009 Allosteric substrate binding domain superfamily APT56_02075 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT56_02075 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal APT56_02075 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase APT56_02085 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site APT56_02085 IPR023753 FAD/NAD(P)-binding domain APT56_02085 IPR036188 FAD/NAD(P)-binding domain superfamily APT56_02085 IPR005982 Thioredoxin reductase APT56_02090 IPR000073 Alpha/beta hydrolase fold-1 APT56_02090 IPR026968 3-oxoadipate enol-lactonase 1/2 APT56_02090 IPR029058 Alpha/Beta hydrolase fold APT56_02090 IPR022742 Serine aminopeptidase, S33 APT56_02095 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_02095 IPR005119 LysR, substrate-binding APT56_02095 IPR000847 Transcription regulator HTH, LysR APT56_02095 IPR036390 Winged helix DNA-binding domain superfamily APT56_02100 IPR028615 Maleate isomerase APT56_02100 IPR026286 Maleate isomerase/Arylmalonate decarboxylase APT56_02105 IPR005119 LysR, substrate-binding APT56_02105 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_02105 IPR000847 Transcription regulator HTH, LysR APT56_02105 IPR036390 Winged helix DNA-binding domain superfamily APT56_02110 IPR005064 Bordetella uptake gene APT56_02110 IPR042100 Bordetella uptake gene, domain 1 APT56_02115 IPR037171 NagB/RpiA transferase-like APT56_02115 IPR004165 Coenzyme A transferase family I APT56_02115 IPR004163 Coenzyme A transferase binding site APT56_02115 IPR012792 3-oxoacid CoA-transferase, subunit A APT56_02120 IPR004165 Coenzyme A transferase family I APT56_02120 IPR037171 NagB/RpiA transferase-like APT56_02120 IPR012791 3-oxoacid CoA-transferase, subunit B APT56_02120 IPR004164 Coenzyme A transferase active site APT56_02125 IPR005064 Bordetella uptake gene APT56_02125 IPR042100 Bordetella uptake gene, domain 1 APT56_02130 IPR036034 PDZ superfamily APT56_02130 IPR001478 PDZ domain APT56_02130 IPR001940 Peptidase S1C APT56_02130 IPR009003 Peptidase S1, PA clan APT56_02135 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site APT56_02135 IPR014748 Enoyl-CoA hydratase, C-terminal APT56_02135 IPR001753 Enoyl-CoA hydratase/isomerase APT56_02135 IPR029045 ClpP/crotonase-like domain superfamily APT56_02150 IPR035908 ATP synthase, F0 complex, subunit A superfamily APT56_02150 IPR000568 ATP synthase, F0 complex, subunit A APT56_02150 IPR023011 ATP synthase, F0 complex, subunit A, active site APT56_02155 IPR000454 ATP synthase, F0 complex, subunit C APT56_02155 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast APT56_02155 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site APT56_02155 IPR002379 V-ATPase proteolipid subunit C-like domain APT56_02155 IPR038662 F1F0 ATP synthase subunit C superfamily APT56_02155 IPR035921 F/V-ATP synthase subunit C superfamily APT56_02160 IPR005864 ATP synthase, F0 complex, subunit b, bacterial APT56_02160 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast APT56_02160 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily APT56_02165 IPR000711 ATPase, OSCP/delta subunit APT56_02165 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily APT56_02170 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily APT56_02170 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily APT56_02170 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_02170 IPR005294 ATP synthase, F1 complex, alpha subunit APT56_02170 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site APT56_02170 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain APT56_02170 IPR000793 ATP synthase, alpha subunit, C-terminal APT56_02170 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain APT56_02170 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily APT56_02170 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain APT56_02175 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily APT56_02175 IPR000131 ATP synthase, F1 complex, gamma subunit APT56_02175 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site APT56_02180 IPR005722 ATP synthase, F1 complex, beta subunit APT56_02180 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site APT56_02180 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain APT56_02180 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily APT56_02180 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain APT56_02180 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal APT56_02180 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_02180 IPR003593 AAA+ ATPase domain APT56_02185 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal APT56_02185 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal APT56_02185 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit APT56_02185 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily APT56_02195 IPR006361 Uroporphyrinogen decarboxylase HemE APT56_02195 IPR000257 Uroporphyrinogen decarboxylase (URO-D) APT56_02195 IPR038071 UROD/MetE-like superfamily APT56_02200 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain APT56_02200 IPR005259 Primosomal protein N' APT56_02200 IPR011545 DEAD/DEAH box helicase domain APT56_02200 IPR014001 Helicase superfamily 1/2, ATP-binding domain APT56_02200 IPR001650 Helicase, C-terminal APT56_02200 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_02200 IPR041236 Primosomal protein N, C-terminal domain APT56_02200 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily APT56_02200 IPR041222 Primosomal protein N', 3' DNA-binding domain APT56_02205 IPR014016 UvrD-like helicase, ATP-binding domain APT56_02205 IPR034739 UvrD/AddA helicase, N-terminal APT56_02205 IPR005752 ATP-dependent DNA helicase Rep APT56_02205 IPR014017 UvrD-like DNA helicase, C-terminal APT56_02205 IPR013986 DExx box DNA helicase domain superfamily APT56_02205 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_02205 IPR000212 DNA helicase, UvrD/REP type APT56_02210 IPR020449 Transcription regulator HTH, AraC- type APT56_02210 IPR018062 HTH domain AraC-type, conserved site APT56_02210 IPR009057 Homeobox-like domain superfamily APT56_02210 IPR018060 DNA binding HTH domain, AraC-type APT56_02210 IPR011051 RmlC-like cupin domain superfamily APT56_02210 IPR014710 RmlC-like jelly roll fold APT56_02215 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APT56_02215 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APT56_02215 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase APT56_02215 IPR015424 Pyridoxal phosphate-dependent transferase APT56_02215 IPR026273 Low specificity L-threonine aldolase APT56_02220 IPR001347 Sugar isomerase (SIS) APT56_02220 IPR029055 Nucleophile aminohydrolases, N-terminal APT56_02220 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising APT56_02220 IPR035490 GlmS/FrlB, SIS domain 2 APT56_02220 IPR035466 GlmS/AgaS, SIS domain 1 APT56_02220 IPR017932 Glutamine amidotransferase type 2 domain APT56_02225 IPR036291 NAD(P)-binding domain superfamily APT56_02225 IPR002347 Short-chain dehydrogenase/reductase SDR APT56_02230 IPR018062 HTH domain AraC-type, conserved site APT56_02230 IPR018060 DNA binding HTH domain, AraC-type APT56_02230 IPR009057 Homeobox-like domain superfamily APT56_02230 IPR002818 DJ-1/PfpI APT56_02230 IPR029062 Class I glutamine amidotransferase-like APT56_02235 IPR011004 Trimeric LpxA-like superfamily APT56_02235 IPR038361 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain superfamily APT56_02235 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain APT56_02235 IPR001451 Hexapeptide repeat APT56_02235 IPR019875 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, actinobacteria APT56_02235 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family APT56_02240 IPR022488 Polyphosphate kinase-2-related APT56_02240 IPR016898 Polyphosphate kinase 2 APT56_02240 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_02240 IPR022486 Polyphosphate kinase 2, PA0141 APT56_02245 IPR002933 Peptidase M20 APT56_02245 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site APT56_02245 IPR008007 Peptidase M42 APT56_02245 IPR011650 Peptidase M20, dimerisation domain APT56_02245 IPR010162 Peptidase M20B, peptidase T-like APT56_02245 IPR036264 Bacterial exopeptidase dimerisation domain APT56_02255 IPR003593 AAA+ ATPase domain APT56_02255 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal APT56_02255 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_02255 IPR003439 ABC transporter-like APT56_02255 IPR017871 ABC transporter, conserved site APT56_02260 IPR017871 ABC transporter, conserved site APT56_02260 IPR003439 ABC transporter-like APT56_02260 IPR003593 AAA+ ATPase domain APT56_02260 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal APT56_02260 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_02265 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_02265 IPR035906 MetI-like superfamily APT56_02265 IPR025966 Oligopeptide transport permease C-like, N-terminal domain APT56_02270 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_02270 IPR035906 MetI-like superfamily APT56_02275 IPR030678 Peptide/nickel binding protein, MppA-type APT56_02275 IPR039424 Solute-binding protein family 5 APT56_02275 IPR000914 Solute-binding protein family 5 domain APT56_02275 IPR023765 Solute-binding protein family 5, conserved site APT56_02280 IPR016681 Succinylglutamate desuccinylase APT56_02280 IPR007036 Succinylglutamate desuccinylase/aspartoacylase APT56_02290 IPR036390 Winged helix DNA-binding domain superfamily APT56_02290 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_02290 IPR000847 Transcription regulator HTH, LysR APT56_02290 IPR005119 LysR, substrate-binding APT56_02290 IPR037404 HTH-type transcriptional activator IlvY, PBP2 domain APT56_02295 IPR039424 Solute-binding protein family 5 APT56_02295 IPR023765 Solute-binding protein family 5, conserved site APT56_02295 IPR000914 Solute-binding protein family 5 domain APT56_02295 IPR030678 Peptide/nickel binding protein, MppA-type APT56_02305 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase APT56_02305 IPR017953 Carbohydrate kinase, predicted, conserved site APT56_02305 IPR029056 Ribokinase-like APT56_02310 IPR029045 ClpP/crotonase-like domain superfamily APT56_02310 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site APT56_02310 IPR001753 Enoyl-CoA hydratase/isomerase APT56_02315 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site APT56_02315 IPR001753 Enoyl-CoA hydratase/isomerase APT56_02315 IPR014748 Enoyl-CoA hydratase, C-terminal APT56_02315 IPR029045 ClpP/crotonase-like domain superfamily APT56_02320 IPR013785 Aldolase-type TIM barrel APT56_02320 IPR004136 Nitronate monooxygenase APT56_02325 IPR009057 Homeobox-like domain superfamily APT56_02325 IPR001647 DNA-binding HTH domain, TetR-type APT56_02325 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily APT56_02335 IPR003673 CoA-transferase family III APT56_02335 IPR023606 CoA-transferase family III domain superfamily APT56_02340 IPR041040 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain APT56_02340 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal APT56_02340 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily APT56_02340 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site APT56_02340 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding APT56_02340 IPR011967 3-hydroxyacyl-CoA dehydrogenase PaaC APT56_02340 IPR036291 NAD(P)-binding domain superfamily APT56_02345 IPR002323 Cytochrome c, class IE APT56_02345 IPR036909 Cytochrome c-like domain superfamily APT56_02345 IPR009056 Cytochrome c-like domain APT56_02365 IPR033900 Porin domain, Gram-negative type APT56_02365 IPR023614 Porin domain superfamily APT56_02365 IPR001702 Porin, Gram-negative type APT56_02365 IPR002299 Porin, Neisseria sp. type APT56_02370 IPR033900 Porin domain, Gram-negative type APT56_02370 IPR023614 Porin domain superfamily APT56_02370 IPR001702 Porin, Gram-negative type APT56_02370 IPR002299 Porin, Neisseria sp. type APT56_02380 IPR014710 RmlC-like jelly roll fold APT56_02380 IPR013096 Cupin 2, conserved barrel APT56_02380 IPR011051 RmlC-like cupin domain superfamily APT56_02385 IPR011234 Fumarylacetoacetase-like, C-terminal APT56_02385 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily APT56_02395 IPR001851 ABC transporter, permease APT56_02400 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal APT56_02400 IPR001851 ABC transporter, permease APT56_02405 IPR003439 ABC transporter-like APT56_02405 IPR003593 AAA+ ATPase domain APT56_02405 IPR015861 ABC transporter, ribose import, RbsA APT56_02405 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_02405 IPR017871 ABC transporter, conserved site APT56_02410 IPR017871 ABC transporter, conserved site APT56_02410 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_02410 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein APT56_02410 IPR003439 ABC transporter-like APT56_02410 IPR003593 AAA+ ATPase domain APT56_02415 IPR003010 Carbon-nitrogen hydrolase APT56_02415 IPR036526 Carbon-nitrogen hydrolase superfamily APT56_02415 IPR000132 Nitrilase/cyanide hydratase, conserved site APT56_02420 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_02420 IPR036390 Winged helix DNA-binding domain superfamily APT56_02420 IPR011711 GntR, C-terminal APT56_02420 IPR008920 Transcription regulator FadR/GntR, C-terminal APT56_02420 IPR000524 Transcription regulator HTH, GntR APT56_02430 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_02430 IPR000847 Transcription regulator HTH, LysR APT56_02430 IPR005119 LysR, substrate-binding APT56_02430 IPR037403 HTH-type transcriptional regulator CynR, PBP2 domain APT56_02430 IPR036390 Winged helix DNA-binding domain superfamily APT56_02435 IPR005064 Bordetella uptake gene APT56_02435 IPR042100 Bordetella uptake gene, domain 1 APT56_02440 IPR016681 Succinylglutamate desuccinylase APT56_02440 IPR007036 Succinylglutamate desuccinylase/aspartoacylase APT56_02450 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain APT56_02450 IPR007370 Glutamate--cysteine ligase APT56_02450 IPR006334 Glutamate--cysteine ligase, monofunctional APT56_02455 IPR000073 Alpha/beta hydrolase fold-1 APT56_02455 IPR019913 Pyrimidine utilisation protein RutD APT56_02455 IPR029058 Alpha/Beta hydrolase fold APT56_02485 IPR036111 Malate/L-sulfolactate/L-lactate dehydrogenase-like superfamily APT56_02485 IPR003767 Malate/L-lactate dehydrogenase-like APT56_02490 IPR036291 NAD(P)-binding domain superfamily APT56_02490 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain APT56_02490 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain APT56_02490 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site APT56_02495 IPR005064 Bordetella uptake gene APT56_02495 IPR042100 Bordetella uptake gene, domain 1 APT56_02500 IPR007392 D-galactarate/Altronate dehydratase, C-terminal APT56_02505 IPR013974 SAF domain APT56_02510 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_02510 IPR036390 Winged helix DNA-binding domain superfamily APT56_02510 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily APT56_02510 IPR000524 Transcription regulator HTH, GntR APT56_02510 IPR011663 UbiC transcription regulator-associated APT56_02515 IPR029058 Alpha/Beta hydrolase fold APT56_02515 IPR000073 Alpha/beta hydrolase fold-1 APT56_02515 IPR008220 Homoserine/serine acetyltransferase MetX-like APT56_02520 IPR010743 Methionine biosynthesis MetW APT56_02520 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT56_02520 IPR000073 Alpha/beta hydrolase fold-1 APT56_02520 IPR029058 Alpha/Beta hydrolase fold APT56_02520 IPR008220 Homoserine/serine acetyltransferase MetX-like APT56_02525 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 APT56_02525 IPR036259 MFS transporter superfamily APT56_02525 IPR011701 Major facilitator superfamily APT56_02525 IPR020846 Major facilitator superfamily domain APT56_02535 IPR005115 Uncharacterised domain UPF0126 APT56_02540 IPR008920 Transcription regulator FadR/GntR, C-terminal APT56_02540 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_02540 IPR036390 Winged helix DNA-binding domain superfamily APT56_02540 IPR000485 AsnC-type HTH domain APT56_02540 IPR000524 Transcription regulator HTH, GntR APT56_02540 IPR011711 GntR, C-terminal APT56_02545 IPR005501 LamB/YcsF/PxpA-like APT56_02545 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel APT56_02550 IPR003778 Carboxyltransferase domain, subdomain A and B APT56_02550 IPR029000 Cyclophilin-like domain superfamily APT56_02555 IPR003833 Carboxyltransferase domain, subdomain C and D APT56_02555 IPR029000 Cyclophilin-like domain superfamily APT56_02555 IPR010016 KipI family APT56_02565 IPR036390 Winged helix DNA-binding domain superfamily APT56_02565 IPR000847 Transcription regulator HTH, LysR APT56_02565 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_02565 IPR005119 LysR, substrate-binding APT56_02575 IPR016181 Acyl-CoA N-acyltransferase APT56_02575 IPR000182 GNAT domain APT56_02585 IPR012337 Ribonuclease H-like superfamily APT56_02585 IPR001584 Integrase, catalytic core APT56_02585 IPR025948 HTH-like domain APT56_02585 IPR036397 Ribonuclease H superfamily APT56_02590 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site APT56_02590 IPR002912 ACT domain APT56_02590 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain APT56_02590 IPR036291 NAD(P)-binding domain superfamily APT56_02590 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain APT56_02590 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 APT56_02600 IPR007939 Copper resistance B precursor APT56_02605 IPR001117 Multicopper oxidase, type 1 APT56_02605 IPR011706 Multicopper oxidase, type 2 APT56_02605 IPR011707 Multicopper oxidase, type 3 APT56_02605 IPR006376 Copper-resistance protein CopA APT56_02605 IPR033138 Multicopper oxidases, conserved site APT56_02605 IPR034284 Copper resistance protein, first cupredoxin domain APT56_02605 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal APT56_02605 IPR008972 Cupredoxin APT56_02605 IPR006311 Twin-arginine translocation pathway, signal sequence APT56_02605 IPR002355 Multicopper oxidase, copper-binding site APT56_02605 IPR034282 Copper resistance protein CopA, second cupredoxin domain APT56_02605 IPR034279 Copper resistance protein, third cupredoxin domain APT56_02615 IPR003594 Histidine kinase/HSP90-like ATPase APT56_02615 IPR006290 Heavy metal sensor kinase APT56_02615 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APT56_02615 IPR003660 HAMP domain APT56_02615 IPR004358 Signal transduction histidine kinase-related protein, C-terminal APT56_02615 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily APT56_02615 IPR005467 Histidine kinase domain APT56_02615 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain APT56_02620 IPR011006 CheY-like superfamily APT56_02620 IPR001867 OmpR/PhoB-type DNA-binding domain APT56_02620 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response APT56_02620 IPR039420 Transcriptional regulatory protein WalR-like APT56_02620 IPR001789 Signal transduction response regulator, receiver domain APT56_02620 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_02625 IPR013767 PAS fold APT56_02625 IPR004358 Signal transduction histidine kinase-related protein, C-terminal APT56_02625 IPR000014 PAS domain APT56_02625 IPR035965 PAS domain superfamily APT56_02625 IPR021766 Phosphate regulon sensor protein PhoR APT56_02625 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR APT56_02625 IPR005467 Histidine kinase domain APT56_02625 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APT56_02625 IPR003594 Histidine kinase/HSP90-like ATPase APT56_02625 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily APT56_02625 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain APT56_02630 IPR001789 Signal transduction response regulator, receiver domain APT56_02630 IPR039420 Transcriptional regulatory protein WalR-like APT56_02630 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB APT56_02630 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_02630 IPR001867 OmpR/PhoB-type DNA-binding domain APT56_02630 IPR011006 CheY-like superfamily APT56_02635 IPR004033 UbiE/COQ5 methyltransferase APT56_02635 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT56_02635 IPR023576 UbiE/COQ5 methyltransferase, conserved site APT56_02650 IPR011009 Protein kinase-like domain superfamily APT56_02650 IPR010232 Probable protein kinase UbiB APT56_02650 IPR004147 UbiB domain APT56_02660 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT56_02660 IPR004821 Cytidyltransferase-like domain APT56_02660 IPR011914 RfaE bifunctional protein, domain II APT56_02665 IPR003423 Outer membrane efflux protein APT56_02665 IPR010130 Type I secretion outer membrane protein, TolC APT56_02670 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT56_02670 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase APT56_02675 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase APT56_02675 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase APT56_02675 IPR029056 Ribokinase-like APT56_02680 IPR033983 Thiazole synthase ThiG APT56_02680 IPR013785 Aldolase-type TIM barrel APT56_02680 IPR008867 Thiazole synthase APT56_02685 IPR002491 ABC transporter periplasmic binding domain APT56_02685 IPR023544 ABC transporter, vitamin B12-binding protein APT56_02690 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily APT56_02690 IPR012910 TonB-dependent receptor, plug domain APT56_02690 IPR037066 TonB-dependent receptor, plug domain superfamily APT56_02690 IPR010917 TonB-dependent receptor, conserved site APT56_02690 IPR000531 TonB-dependent receptor-like, beta-barrel APT56_02690 IPR010916 TonB box, conserved site APT56_02690 IPR039426 Vitamin B12 transporter BtuB-like APT56_02695 IPR000489 Pterin-binding domain APT56_02695 IPR036594 Methionine synthase domain APT56_02695 IPR004223 Vitamin B12-dependent methionine synthase, activation domain APT56_02695 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily APT56_02695 IPR011822 Cobalamin-dependent methionine synthase APT56_02695 IPR006158 Cobalamin (vitamin B12)-binding domain APT56_02695 IPR011005 Dihydropteroate synthase-like APT56_02695 IPR003726 Homocysteine-binding domain APT56_02695 IPR036589 Homocysteine-binding domain superfamily APT56_02695 IPR033706 Methionine synthase, B12-binding domain APT56_02695 IPR036724 Cobalamin-binding domain superfamily APT56_02695 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain APT56_02700 IPR000524 Transcription regulator HTH, GntR APT56_02700 IPR011711 GntR, C-terminal APT56_02700 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_02700 IPR008920 Transcription regulator FadR/GntR, C-terminal APT56_02700 IPR036390 Winged helix DNA-binding domain superfamily APT56_02715 IPR013154 Alcohol dehydrogenase, N-terminal APT56_02715 IPR013149 Alcohol dehydrogenase, C-terminal APT56_02715 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site APT56_02715 IPR011032 GroES-like superfamily APT56_02715 IPR020843 Polyketide synthase, enoylreductase domain APT56_02715 IPR036291 NAD(P)-binding domain superfamily APT56_02720 IPR035906 MetI-like superfamily APT56_02720 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_02720 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain APT56_02725 IPR035906 MetI-like superfamily APT56_02725 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain APT56_02725 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_02730 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_02730 IPR017871 ABC transporter, conserved site APT56_02730 IPR003439 ABC transporter-like APT56_02730 IPR003593 AAA+ ATPase domain APT56_02730 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type APT56_02735 IPR036849 Enolase-like, C-terminal domain superfamily APT56_02735 IPR034593 Mandelate racemase-like APT56_02735 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal APT56_02735 IPR029017 Enolase-like, N-terminal APT56_02735 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain APT56_02735 IPR029065 Enolase C-terminal domain-like APT56_02735 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site APT56_02735 IPR034589 D-mannonate dehydratase-like APT56_02740 IPR013328 6-phosphogluconate dehydrogenase, domain 2 APT56_02740 IPR000669 Mannitol dehydrogenase APT56_02740 IPR036291 NAD(P)-binding domain superfamily APT56_02740 IPR013131 Mannitol dehydrogenase, N-terminal APT56_02740 IPR023027 Mannitol dehydrogenase, conserved site APT56_02740 IPR013118 Mannitol dehydrogenase, C-terminal APT56_02740 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily APT56_02745 IPR020556 Amidase, conserved site APT56_02745 IPR036928 Amidase signature (AS) superfamily APT56_02745 IPR000120 Amidase APT56_02745 IPR023631 Amidase signature domain APT56_02755 IPR005760 A/G-specific adenine glycosylase MutY APT56_02755 IPR011257 DNA glycosylase APT56_02755 IPR004036 Endonuclease III-like, conserved site-2 APT56_02755 IPR015797 NUDIX hydrolase-like domain superfamily APT56_02755 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif APT56_02755 IPR004035 Endonuclease III, iron-sulphur binding site APT56_02755 IPR029119 MutY, C-terminal APT56_02755 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal APT56_02755 IPR003265 HhH-GPD domain APT56_02755 IPR000445 Helix-hairpin-helix motif APT56_02770 IPR002818 DJ-1/PfpI APT56_02770 IPR009057 Homeobox-like domain superfamily APT56_02770 IPR018060 DNA binding HTH domain, AraC-type APT56_02770 IPR018062 HTH domain AraC-type, conserved site APT56_02770 IPR029062 Class I glutamine amidotransferase-like APT56_02775 IPR005659 Chemoreceptor glutamine deamidase CheD APT56_02775 IPR011324 Cytotoxic necrotizing factor-like, catalytic APT56_02775 IPR038592 CheD-like superfamily APT56_02780 IPR040690 FtsX, extracellular domain APT56_02780 IPR004513 Cell division protein FtsX APT56_02785 IPR003439 ABC transporter-like APT56_02785 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_02785 IPR005286 Cell division protein FtsE, ATP-binding APT56_02785 IPR003593 AAA+ ATPase domain APT56_02785 IPR017871 ABC transporter, conserved site APT56_02790 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APT56_02790 IPR018313 Solute-binding protein family 3, conserved site APT56_02790 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter APT56_02795 IPR035906 MetI-like superfamily APT56_02795 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_02795 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain APT56_02800 IPR035906 MetI-like superfamily APT56_02800 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_02800 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain APT56_02805 IPR017871 ABC transporter, conserved site APT56_02805 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_02805 IPR003593 AAA+ ATPase domain APT56_02805 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type APT56_02805 IPR003439 ABC transporter-like APT56_02810 IPR005064 Bordetella uptake gene APT56_02810 IPR042100 Bordetella uptake gene, domain 1 APT56_02825 IPR036188 FAD/NAD(P)-binding domain superfamily APT56_02825 IPR002938 FAD-binding domain APT56_02830 IPR023166 HI0933-like insert domain superfamily APT56_02830 IPR036188 FAD/NAD(P)-binding domain superfamily APT56_02830 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like APT56_02835 IPR006311 Twin-arginine translocation pathway, signal sequence APT56_02835 IPR042100 Bordetella uptake gene, domain 1 APT56_02835 IPR005064 Bordetella uptake gene APT56_02840 IPR036263 Chorismate mutase type II superfamily APT56_02840 IPR002912 ACT domain APT56_02840 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase APT56_02840 IPR036979 Chorismate mutase domain superfamily APT56_02840 IPR002701 Chorismate mutase II, prokaryotic-type APT56_02840 IPR001086 Prephenate dehydratase APT56_02840 IPR018528 Prephenate dehydratase, conserved site APT56_02845 IPR010987 Glutathione S-transferase, C-terminal-like APT56_02845 IPR036282 Glutathione S-transferase, C-terminal domain superfamily APT56_02845 IPR040079 Glutathione Transferase family APT56_02845 IPR034330 Glutathione S-transferases, class Zeta , C-terminal APT56_02845 IPR005955 Glutathione S-transferases, class Zeta APT56_02845 IPR036249 Thioredoxin-like superfamily APT56_02845 IPR034333 Glutathione S-transferases, class Zeta , N-terminal APT56_02845 IPR004045 Glutathione S-transferase, N-terminal APT56_02850 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily APT56_02850 IPR011234 Fumarylacetoacetase-like, C-terminal APT56_02855 IPR014710 RmlC-like jelly roll fold APT56_02855 IPR013096 Cupin 2, conserved barrel APT56_02855 IPR011051 RmlC-like cupin domain superfamily APT56_02860 IPR036390 Winged helix DNA-binding domain superfamily APT56_02860 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_02860 IPR000847 Transcription regulator HTH, LysR APT56_02860 IPR005119 LysR, substrate-binding APT56_02860 IPR037405 HTH-type transcriptional regulator GbpR, PBP2 domain APT56_02870 IPR018485 Carbohydrate kinase, FGGY, C-terminal APT56_02870 IPR005999 Glycerol kinase APT56_02870 IPR000577 Carbohydrate kinase, FGGY APT56_02870 IPR018484 Carbohydrate kinase, FGGY, N-terminal APT56_02870 IPR018483 Carbohydrate kinase, FGGY, conserved site APT56_02875 IPR004638 Drug resistance transporter EmrB-like APT56_02875 IPR036259 MFS transporter superfamily APT56_02875 IPR011701 Major facilitator superfamily APT56_02875 IPR020846 Major facilitator superfamily domain APT56_02885 IPR003768 Segregation and condensation protein A APT56_02890 IPR003721 Pantoate-beta-alanine ligase APT56_02890 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain APT56_02890 IPR004821 Cytidyltransferase-like domain APT56_02890 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT56_02895 IPR011006 CheY-like superfamily APT56_02895 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_02895 IPR016032 Signal transduction response regulator, C-terminal effector APT56_02895 IPR001789 Signal transduction response regulator, receiver domain APT56_02895 IPR000792 Transcription regulator LuxR, C-terminal APT56_02905 IPR010627 Peptidase A24A, N-terminal APT56_02905 IPR014032 Peptidase A24A, prepilin type IV, bacterial APT56_02905 IPR000045 Prepilin type IV endopeptidase, peptidase domain APT56_02910 IPR001977 Dephospho-CoA kinase APT56_02910 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_02915 IPR027462 Z ring-associated protein D, C-terminal APT56_02915 IPR009777 Cell division protein ZapD APT56_02915 IPR036268 ZapD domain superfamily APT56_02920 IPR039562 Membrane fusion protein, biotin-lipoyl like domain APT56_02920 IPR022824 Multidrug resistance protein MdtA APT56_02920 IPR006143 RND efflux pump, membrane fusion protein APT56_02925 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APT56_02925 IPR001036 Acriflavin resistance protein APT56_02925 IPR022831 Multidrug resistance protein MdtB APT56_02930 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APT56_02930 IPR023931 Multidrug resistance protein MdtC APT56_02930 IPR001036 Acriflavin resistance protein APT56_02935 IPR010131 RND efflux system, outer membrane lipoprotein, NodT APT56_02935 IPR003423 Outer membrane efflux protein APT56_02940 IPR042100 Bordetella uptake gene, domain 1 APT56_02940 IPR005064 Bordetella uptake gene APT56_02945 IPR036188 FAD/NAD(P)-binding domain superfamily APT56_02945 IPR006076 FAD dependent oxidoreductase APT56_02945 IPR023080 D-amino acid dehydrogenase DadA APT56_02950 IPR032466 Metal-dependent hydrolase APT56_02950 IPR011059 Metal-dependent hydrolase, composite domain superfamily APT56_02950 IPR023100 D-aminoacylase, insert domain superfamily APT56_02950 IPR013108 Amidohydrolase 3 APT56_02965 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_02965 IPR035906 MetI-like superfamily APT56_02975 IPR017922 sn-Glycerol-3-phosphate import ATP-binding protein UgpC APT56_02975 IPR017871 ABC transporter, conserved site APT56_02975 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_02975 IPR040582 MalK, OB fold domain APT56_02975 IPR003593 AAA+ ATPase domain APT56_02975 IPR008995 Molybdate/tungstate binding, C-terminal APT56_02975 IPR003439 ABC transporter-like APT56_02985 IPR020084 NUDIX hydrolase, conserved site APT56_02985 IPR000086 NUDIX hydrolase domain APT56_02985 IPR015797 NUDIX hydrolase-like domain superfamily APT56_02985 IPR020476 NUDIX hydrolase APT56_02985 IPR003561 Mutator MutT APT56_02995 IPR016117 ArgJ-like domain superfamily APT56_02995 IPR042195 ArgJ beta chain, C-terminal domain APT56_02995 IPR002813 Arginine biosynthesis protein ArgJ APT56_03015 IPR001851 ABC transporter, permease APT56_03020 IPR001851 ABC transporter, permease APT56_03020 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal APT56_03025 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal APT56_03025 IPR017871 ABC transporter, conserved site APT56_03025 IPR003439 ABC transporter-like APT56_03025 IPR003593 AAA+ ATPase domain APT56_03025 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_03030 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein APT56_03030 IPR003439 ABC transporter-like APT56_03030 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_03030 IPR017871 ABC transporter, conserved site APT56_03030 IPR003593 AAA+ ATPase domain APT56_03045 IPR018530 Domain of unknown function DUF1987 APT56_03050 IPR013656 PAS fold-4 APT56_03050 IPR000160 GGDEF domain APT56_03050 IPR029787 Nucleotide cyclase APT56_03050 IPR000014 PAS domain APT56_03050 IPR000700 PAS-associated, C-terminal APT56_03050 IPR035965 PAS domain superfamily APT56_03055 IPR005330 MHYT domain APT56_03055 IPR029787 Nucleotide cyclase APT56_03055 IPR035919 EAL domain superfamily APT56_03055 IPR001633 EAL domain APT56_03055 IPR000160 GGDEF domain APT56_03060 IPR036188 FAD/NAD(P)-binding domain superfamily APT56_03060 IPR002938 FAD-binding domain APT56_03065 IPR002347 Short-chain dehydrogenase/reductase SDR APT56_03065 IPR036291 NAD(P)-binding domain superfamily APT56_03065 IPR011294 3-hydroxybutyrate dehydrogenase APT56_03065 IPR020904 Short-chain dehydrogenase/reductase, conserved site APT56_03070 IPR029045 ClpP/crotonase-like domain superfamily APT56_03070 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB APT56_03070 IPR014748 Enoyl-CoA hydratase, C-terminal APT56_03070 IPR001753 Enoyl-CoA hydratase/isomerase APT56_03075 IPR006089 Acyl-CoA dehydrogenase, conserved site APT56_03075 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain APT56_03075 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal APT56_03075 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal APT56_03075 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal APT56_03075 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily APT56_03075 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily APT56_03080 IPR011957 Benzoate-CoA ligase family APT56_03080 IPR000873 AMP-dependent synthetase/ligase APT56_03080 IPR025110 AMP-binding enzyme, C-terminal domain APT56_03105 IPR002925 Dienelactone hydrolase APT56_03105 IPR029058 Alpha/Beta hydrolase fold APT56_03110 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily APT56_03110 IPR017941 Rieske [2Fe-2S] iron-sulphur domain APT56_03110 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site APT56_03110 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain APT56_03110 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit APT56_03110 IPR017639 Benzoate 1,2-dioxygenase, large subunit APT56_03115 IPR032710 NTF2-like domain superfamily APT56_03115 IPR000391 Ring-hydroxylating dioxygenase beta subunit APT56_03120 IPR036380 Isochorismatase-like superfamily APT56_03120 IPR000868 Isochorismatase-like APT56_03125 IPR002347 Short-chain dehydrogenase/reductase SDR APT56_03125 IPR036291 NAD(P)-binding domain superfamily APT56_03135 IPR023346 Lysozyme-like domain superfamily APT56_03135 IPR000189 Prokaryotic transglycosylase, active site APT56_03135 IPR008258 Transglycosylase SLT domain 1 APT56_03140 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase APT56_03140 IPR015424 Pyridoxal phosphate-dependent transferase APT56_03140 IPR005814 Aminotransferase class-III APT56_03140 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APT56_03140 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APT56_03145 IPR013785 Aldolase-type TIM barrel APT56_03145 IPR022998 Thiamine phosphate synthase/TenI APT56_03145 IPR036206 Thiamin phosphate synthase superfamily APT56_03145 IPR034291 Thiamine phosphate synthase APT56_03150 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase APT56_03150 IPR029056 Ribokinase-like APT56_03150 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase APT56_03155 IPR024922 Rubredoxin APT56_03155 IPR024934 Rubredoxin-like domain APT56_03155 IPR024935 Rubredoxin domain APT56_03155 IPR018527 Rubredoxin, iron-binding site APT56_03160 IPR003774 Protein of unknown function UPF0301 APT56_03165 IPR005227 Putative pre-16S rRNA nuclease APT56_03165 IPR006641 YqgF/RNase H-like domain APT56_03165 IPR037027 YqgF/RNase H-like domain superfamily APT56_03165 IPR012337 Ribonuclease H-like superfamily APT56_03170 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain APT56_03170 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding APT56_03170 IPR002082 Aspartate carbamoyltransferase APT56_03170 IPR006130 Aspartate/ornithine carbamoyltransferase APT56_03170 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily APT56_03175 IPR011059 Metal-dependent hydrolase, composite domain superfamily APT56_03175 IPR032466 Metal-dependent hydrolase APT56_03175 IPR004722 Dihydroorotase APT56_03175 IPR006680 Amidohydrolase-related APT56_03180 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase APT56_03180 IPR002123 Phospholipid/glycerol acyltransferase APT56_03185 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_03185 IPR003593 AAA+ ATPase domain APT56_03185 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type APT56_03185 IPR017871 ABC transporter, conserved site APT56_03185 IPR003439 ABC transporter-like APT56_03190 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain APT56_03190 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_03190 IPR035906 MetI-like superfamily APT56_03195 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain APT56_03195 IPR035906 MetI-like superfamily APT56_03195 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_03200 IPR018313 Solute-binding protein family 3, conserved site APT56_03200 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter APT56_03200 IPR001320 Ionotropic glutamate receptor APT56_03200 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APT56_03210 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily APT56_03210 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein APT56_03220 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type APT56_03220 IPR029052 Metallo-dependent phosphatase-like APT56_03220 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) APT56_03230 IPR011812 Biosynthetic peptidoglycan transglycosylase APT56_03230 IPR001264 Glycosyl transferase, family 51 APT56_03230 IPR023346 Lysozyme-like domain superfamily APT56_03230 IPR036950 Penicillin binding protein transglycosylase domain APT56_03235 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal APT56_03235 IPR022893 Shikimate dehydrogenase family APT56_03235 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase APT56_03235 IPR041121 SDH, C-terminal APT56_03235 IPR036291 NAD(P)-binding domain superfamily APT56_03235 IPR011342 Shikimate dehydrogenase APT56_03245 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_03245 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit APT56_03245 IPR013611 Transport-associated OB, type 2 APT56_03245 IPR008995 Molybdate/tungstate binding, C-terminal APT56_03245 IPR003439 ABC transporter-like APT56_03245 IPR017871 ABC transporter, conserved site APT56_03245 IPR003593 AAA+ ATPase domain APT56_03245 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA APT56_03250 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_03250 IPR035906 MetI-like superfamily APT56_03260 IPR003660 HAMP domain APT56_03260 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain APT56_03260 IPR005467 Histidine kinase domain APT56_03260 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APT56_03260 IPR003594 Histidine kinase/HSP90-like ATPase APT56_03260 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily APT56_03260 IPR013727 Two-component sensor kinase, N-terminal APT56_03260 IPR004358 Signal transduction histidine kinase-related protein, C-terminal APT56_03265 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_03265 IPR001789 Signal transduction response regulator, receiver domain APT56_03265 IPR016032 Signal transduction response regulator, C-terminal effector APT56_03265 IPR011006 CheY-like superfamily APT56_03265 IPR001867 OmpR/PhoB-type DNA-binding domain APT56_03265 IPR039420 Transcriptional regulatory protein WalR-like APT56_03270 IPR012340 Nucleic acid-binding, OB-fold APT56_03270 IPR001900 Ribonuclease II/R APT56_03275 IPR029058 Alpha/Beta hydrolase fold APT56_03275 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA APT56_03280 IPR005757 Murein peptide ligase APT56_03280 IPR036615 Mur ligase, C-terminal domain superfamily APT56_03280 IPR013221 Mur ligase, central APT56_03280 IPR000713 Mur ligase, N-terminal catalytic domain APT56_03280 IPR036565 Mur-like, catalytic domain superfamily APT56_03280 IPR004101 Mur ligase, C-terminal APT56_03285 IPR013766 Thioredoxin domain APT56_03285 IPR017937 Thioredoxin, conserved site APT56_03285 IPR036249 Thioredoxin-like superfamily APT56_03285 IPR013740 Redoxin APT56_03285 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE APT56_03290 IPR001874 Dehydroquinase, class II APT56_03290 IPR018509 Dehydroquinase, class II, conserved site APT56_03290 IPR036441 Dehydroquinase, class II superfamily APT56_03295 IPR011053 Single hybrid motif APT56_03295 IPR000089 Biotin/lipoyl attachment APT56_03295 IPR001882 Biotin-binding site APT56_03295 IPR001249 Acetyl-CoA biotin carboxyl carrier APT56_03300 IPR011054 Rudiment single hybrid motif APT56_03300 IPR016185 Pre-ATP-grasp domain superfamily APT56_03300 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain APT56_03300 IPR005482 Biotin carboxylase, C-terminal APT56_03300 IPR005481 Biotin carboxylase-like, N-terminal domain APT56_03300 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase APT56_03300 IPR011761 ATP-grasp fold APT56_03300 IPR013815 ATP-grasp fold, subdomain 1 APT56_03300 IPR011764 Biotin carboxylation domain APT56_03305 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT56_03305 IPR004498 Ribosomal protein L11 methyltransferase APT56_03315 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT56_03315 IPR029056 Ribokinase-like APT56_03315 IPR011914 RfaE bifunctional protein, domain II APT56_03315 IPR011913 RfaE bifunctional protein, domain I APT56_03315 IPR011611 Carbohydrate kinase PfkB APT56_03315 IPR004821 Cytidyltransferase-like domain APT56_03315 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site APT56_03315 IPR023030 Bifunctional protein HldE APT56_03340 IPR004299 Membrane bound O-acyl transferase, MBOAT APT56_03340 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB APT56_03340 IPR024024 D-alanyl transfer protein DltB APT56_03345 IPR010072 D-alanine--D-alanyl carrier protein ligase APT56_03345 IPR010071 Amino acid adenylation domain APT56_03345 IPR000873 AMP-dependent synthetase/ligase APT56_03345 IPR025110 AMP-binding enzyme, C-terminal domain APT56_03345 IPR042099 AMP-dependent synthetase-like superfamily APT56_03345 IPR020845 AMP-binding, conserved site APT56_03360 IPR000358 Ribonucleotide reductase small subunit family APT56_03360 IPR033909 Ribonucleotide reductase small subunit APT56_03360 IPR012348 Ribonucleotide reductase-like APT56_03360 IPR009078 Ferritin-like superfamily APT56_03365 IPR005144 ATP-cone domain APT56_03365 IPR013346 Ribonucleotide reductase, class I , alpha subunit APT56_03365 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal APT56_03365 IPR000788 Ribonucleotide reductase large subunit, C-terminal APT56_03365 IPR013509 Ribonucleotide reductase large subunit, N-terminal APT56_03365 IPR039718 Ribonucleoside-diphosphate reductase large subunit APT56_03375 IPR019885 Transcription regulator HTH, AsnC-type, conserved site APT56_03375 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain APT56_03375 IPR019888 Transcription regulator AsnC-type APT56_03375 IPR011008 Dimeric alpha-beta barrel APT56_03375 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_03375 IPR036390 Winged helix DNA-binding domain superfamily APT56_03375 IPR000485 AsnC-type HTH domain APT56_03380 IPR042100 Bordetella uptake gene, domain 1 APT56_03380 IPR005064 Bordetella uptake gene APT56_03390 IPR037403 HTH-type transcriptional regulator CynR, PBP2 domain APT56_03390 IPR000847 Transcription regulator HTH, LysR APT56_03390 IPR036390 Winged helix DNA-binding domain superfamily APT56_03390 IPR005119 LysR, substrate-binding APT56_03390 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_03405 IPR020752 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 1 APT56_03405 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain APT56_03405 IPR033910 Glutamyl-tRNA synthetase APT56_03405 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT56_03405 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial APT56_03405 IPR000924 Glutamyl/glutaminyl-tRNA synthetase APT56_03405 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site APT56_03405 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding APT56_03410 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain APT56_03410 IPR036291 NAD(P)-binding domain superfamily APT56_03410 IPR000182 GNAT domain APT56_03410 IPR016102 Succinyl-CoA synthetase-like APT56_03410 IPR003781 CoA-binding APT56_03410 IPR011761 ATP-grasp fold APT56_03410 IPR013815 ATP-grasp fold, subdomain 1 APT56_03410 IPR016181 Acyl-CoA N-acyltransferase APT56_03415 IPR036380 Isochorismatase-like superfamily APT56_03415 IPR000868 Isochorismatase-like APT56_03415 IPR019916 Isochorismatase, RutB APT56_03420 IPR035906 MetI-like superfamily APT56_03420 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_03425 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_03425 IPR017871 ABC transporter, conserved site APT56_03425 IPR003593 AAA+ ATPase domain APT56_03425 IPR003439 ABC transporter-like APT56_03440 IPR023153 PSPTO4464-like domain superfamily APT56_03440 IPR006839 Ribosome-associated, YjgA APT56_03445 IPR002510 Metalloprotease TldD/PmbA APT56_03445 IPR036059 Metalloprotease TldD/PmbA superfamily APT56_03445 IPR035068 Metalloprotease TldD/PmbA, N-terminal APT56_03450 IPR026289 Solute binding protein, TakP-like APT56_03450 IPR006311 Twin-arginine translocation pathway, signal sequence APT56_03450 IPR041722 Alpha-keto acid binding periplasmic protein APT56_03450 IPR018389 TRAP transporter solute receptor DctP/TeaA APT56_03450 IPR038404 TRAP transporter solute receptor DctP superfamily APT56_03455 IPR028082 Periplasmic binding protein-like I APT56_03455 IPR000709 Leu/Ile/Val-binding protein APT56_03455 IPR028081 Leucine-binding protein domain APT56_03460 IPR001851 ABC transporter, permease APT56_03465 IPR001851 ABC transporter, permease APT56_03465 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal APT56_03470 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_03470 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal APT56_03470 IPR017871 ABC transporter, conserved site APT56_03470 IPR003593 AAA+ ATPase domain APT56_03470 IPR003439 ABC transporter-like APT56_03475 IPR017871 ABC transporter, conserved site APT56_03475 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_03475 IPR003439 ABC transporter-like APT56_03475 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein APT56_03475 IPR003593 AAA+ ATPase domain APT56_03480 IPR005822 Ribosomal protein L13 APT56_03480 IPR005823 Ribosomal protein L13, bacterial-type APT56_03480 IPR036899 Ribosomal protein L13 superfamily APT56_03485 IPR020574 Ribosomal protein S9, conserved site APT56_03485 IPR023035 Ribosomal protein S9, bacterial/plastid APT56_03485 IPR000754 Ribosomal protein S9 APT56_03485 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APT56_03485 IPR020568 Ribosomal protein S5 domain 2-type fold APT56_03490 IPR012280 Semialdehyde dehydrogenase, dimerisation domain APT56_03490 IPR000534 Semialdehyde dehydrogenase, NAD-binding APT56_03490 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 APT56_03490 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site APT56_03490 IPR036291 NAD(P)-binding domain superfamily APT56_03500 IPR000361 FeS cluster biogenesis APT56_03500 IPR016092 FeS cluster insertion protein APT56_03500 IPR017870 FeS cluster insertion, C-terminal, conserved site APT56_03500 IPR023063 FeS cluster insertion protein ErpA APT56_03500 IPR035903 HesB-like domain superfamily APT56_03505 IPR005338 Anhydro-N-acetylmuramic acid kinase APT56_03515 IPR036986 RNA-binding S4 domain superfamily APT56_03515 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site APT56_03515 IPR002305 Aminoacyl-tRNA synthetase, class Ic APT56_03515 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 APT56_03515 IPR024088 Tyrosine-tRNA ligase, bacterial-type APT56_03515 IPR002307 Tyrosine-tRNA ligase APT56_03515 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT56_03515 IPR002942 RNA-binding S4 domain APT56_03525 IPR004778 Homoserine/Threonine efflux protein APT56_03525 IPR001123 Amino acid exporter protein, LeuE-type APT56_03530 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APT56_03530 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APT56_03530 IPR001085 Serine hydroxymethyltransferase APT56_03530 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site APT56_03530 IPR039429 Serine hydroxymethyltransferase-like domain APT56_03530 IPR015424 Pyridoxal phosphate-dependent transferase APT56_03535 IPR005144 ATP-cone domain APT56_03535 IPR003796 Ribonucleotide reductase regulator NrdR-like APT56_03550 IPR016193 Cytidine deaminase-like APT56_03550 IPR024072 Dihydrofolate reductase-like domain superfamily APT56_03550 IPR016192 APOBEC/CMP deaminase, zinc-binding APT56_03550 IPR002125 Cytidine and deoxycytidylate deaminase domain APT56_03550 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal APT56_03550 IPR004794 Riboflavin biosynthesis protein RibD APT56_03550 IPR011549 Riboflavin-specific deaminase, C-terminal APT56_03565 IPR010650 PrkA C-terminal domain APT56_03565 IPR013153 PrkA AAA domain APT56_03565 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_03565 IPR016230 Serine-protein kinase, PrkA APT56_03570 IPR036465 von Willebrand factor A-like domain superfamily APT56_03570 IPR006698 Uncharacterised protein family UPF0229 APT56_03575 IPR007390 Sporulation stage V, protein R APT56_03585 IPR036390 Winged helix DNA-binding domain superfamily APT56_03585 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_03585 IPR000847 Transcription regulator HTH, LysR APT56_03585 IPR005119 LysR, substrate-binding APT56_03590 IPR014347 Tautomerase/MIF superfamily APT56_03590 IPR037479 Tautomerase, MSAD family APT56_03600 IPR000182 GNAT domain APT56_03600 IPR006464 N-acetyltransferase RimI/Ard1 APT56_03600 IPR016181 Acyl-CoA N-acyltransferase APT56_03610 IPR036249 Thioredoxin-like superfamily APT56_03610 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL APT56_03610 IPR001853 DSBA-like thioredoxin domain APT56_03610 IPR013766 Thioredoxin domain APT56_03620 IPR005064 Bordetella uptake gene APT56_03620 IPR042100 Bordetella uptake gene, domain 1 APT56_03625 IPR005119 LysR, substrate-binding APT56_03625 IPR037424 Regulatory protein NocR, PBP2 domain APT56_03625 IPR000847 Transcription regulator HTH, LysR APT56_03625 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_03625 IPR036390 Winged helix DNA-binding domain superfamily APT56_03665 IPR042194 FHIPEP, domain 1 APT56_03665 IPR042193 FHIPEP, domain 3 APT56_03665 IPR042196 FHIPEP, domain 4 APT56_03665 IPR025505 FHIPEP conserved site APT56_03665 IPR001712 Type III secretion system FHIPEP APT56_03665 IPR006302 Type III secretion protein HrcV APT56_03740 IPR006182 Secretory protein YscJ/FliF APT56_03740 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ APT56_03750 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE APT56_03750 IPR012842 Type III secretion system HrpE/YscL APT56_03755 IPR003593 AAA+ ATPase domain APT56_03755 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain APT56_03755 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain APT56_03755 IPR005714 ATPase, type III secretion system, FliI/YscN APT56_03755 IPR013380 ATPase, type III secretion system, H+-transporting APT56_03755 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_03755 IPR040627 T3SS EscN ATPase, C-terminal APT56_03755 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site APT56_03770 IPR036429 SpoA-like superfamily APT56_03770 IPR001543 Surface presentation of antigen (SpoA) APT56_03770 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb APT56_03775 IPR005838 Type III secretion system inner membrane P protein APT56_03775 IPR005773 Yop virulence translocation protein R APT56_03780 IPR006306 Type III secretion protein HrpO APT56_03780 IPR002191 Bacterial export protein family 3 APT56_03785 IPR006304 Type III secretion protein SpaR/YscT APT56_03785 IPR002010 Type III secretion system inner membrane R protein APT56_03790 IPR006307 Type III exporter system, secretion apparatus protein BsaZ APT56_03790 IPR006135 Type III secretion system substrate exporter APT56_03790 IPR029025 Type III secretion system substrate exporter, C-terminal APT56_03805 IPR013325 RNA polymerase sigma factor, region 2 APT56_03805 IPR007627 RNA polymerase sigma-70 region 2 APT56_03805 IPR014286 RNA polymerase sigma-70 RpoE type APT56_03805 IPR013324 RNA polymerase sigma factor, region 3/4-like APT56_03805 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 APT56_03805 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_03805 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site APT56_03805 IPR014284 RNA polymerase sigma-70 like domain APT56_03805 IPR039425 RNA polymerase sigma-70 like APT56_03820 IPR036457 PPM-type phosphatase domain superfamily APT56_03820 IPR003660 HAMP domain APT56_03820 IPR001932 PPM-type phosphatase domain APT56_03830 IPR000821 Alanine racemase APT56_03830 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal APT56_03830 IPR011079 Alanine racemase, C-terminal APT56_03830 IPR001608 Alanine racemase, N-terminal APT56_03830 IPR029066 PLP-binding barrel APT56_03830 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site APT56_03835 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APT56_03835 IPR003594 Histidine kinase/HSP90-like ATPase APT56_03840 IPR003658 Anti-sigma factor antagonist APT56_03840 IPR002645 STAS domain APT56_03840 IPR036513 STAS domain superfamily APT56_03855 IPR013785 Aldolase-type TIM barrel APT56_03855 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD APT56_03855 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal APT56_03855 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily APT56_03855 IPR004393 Nicotinate-nucleotide pyrophosphorylase APT56_03855 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal APT56_03855 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal APT56_03860 IPR042100 Bordetella uptake gene, domain 1 APT56_03860 IPR005064 Bordetella uptake gene APT56_03875 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) APT56_03875 IPR036291 NAD(P)-binding domain superfamily APT56_03875 IPR002347 Short-chain dehydrogenase/reductase SDR APT56_03880 IPR018392 LysM domain APT56_03880 IPR036779 LysM domain superfamily APT56_03880 IPR023346 Lysozyme-like domain superfamily APT56_03880 IPR000189 Prokaryotic transglycosylase, active site APT56_03880 IPR008258 Transglycosylase SLT domain 1 APT56_03885 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like APT56_03885 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain APT56_03885 IPR017782 Hydroxyacylglutathione hydrolase APT56_03885 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain APT56_03885 IPR001279 Metallo-beta-lactamase APT56_03890 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT56_03890 IPR013216 Methyltransferase type 11 APT56_03890 IPR026669 Arsenite methyltransferase-like APT56_03895 IPR012337 Ribonuclease H-like superfamily APT56_03895 IPR022892 Ribonuclease HI APT56_03895 IPR036397 Ribonuclease H superfamily APT56_03895 IPR002156 Ribonuclease H domain APT56_03900 IPR006143 RND efflux pump, membrane fusion protein APT56_03900 IPR022824 Multidrug resistance protein MdtA APT56_03900 IPR039562 Membrane fusion protein, biotin-lipoyl like domain APT56_03905 IPR001036 Acriflavin resistance protein APT56_03905 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APT56_03910 IPR006309 DNA polymerase 3, epsilon subunit APT56_03910 IPR013520 Exonuclease, RNase T/DNA polymerase III APT56_03910 IPR012337 Ribonuclease H-like superfamily APT56_03910 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain APT56_03910 IPR036397 Ribonuclease H superfamily APT56_03920 IPR003791 Protein of unknown function UPF0178 APT56_03935 IPR004445 Sodium/glutamate symport carrier protein GltS APT56_03945 IPR029044 Nucleotide-diphospho-sugar transferases APT56_03945 IPR001173 Glycosyltransferase 2-like APT56_03950 IPR003342 Glycosyl transferase family 39/83 APT56_03950 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase APT56_03965 IPR005119 LysR, substrate-binding APT56_03965 IPR036390 Winged helix DNA-binding domain superfamily APT56_03965 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_03965 IPR000847 Transcription regulator HTH, LysR APT56_03985 IPR001851 ABC transporter, permease APT56_03995 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein APT56_03995 IPR003439 ABC transporter-like APT56_03995 IPR003593 AAA+ ATPase domain APT56_03995 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_03995 IPR017871 ABC transporter, conserved site APT56_04000 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_04000 IPR017871 ABC transporter, conserved site APT56_04000 IPR003439 ABC transporter-like APT56_04000 IPR003593 AAA+ ATPase domain APT56_04000 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal APT56_04005 IPR013785 Aldolase-type TIM barrel APT56_04005 IPR002220 DapA-like APT56_04005 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA APT56_04005 IPR020625 Schiff base-forming aldolase, active site APT56_04015 IPR000847 Transcription regulator HTH, LysR APT56_04015 IPR005119 LysR, substrate-binding APT56_04015 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_04015 IPR036390 Winged helix DNA-binding domain superfamily APT56_04020 IPR005538 LrgA/CidA family APT56_04020 IPR023760 Holin-like protein CidA APT56_04030 IPR001123 Amino acid exporter protein, LeuE-type APT56_04035 IPR000620 EamA domain APT56_04040 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_04040 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APT56_04040 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APT56_04040 IPR015424 Pyridoxal phosphate-dependent transferase APT56_04040 IPR036390 Winged helix DNA-binding domain superfamily APT56_04040 IPR000524 Transcription regulator HTH, GntR APT56_04040 IPR004839 Aminotransferase, class I/classII APT56_04050 IPR006015 Universal stress protein A family APT56_04050 IPR006016 UspA APT56_04055 IPR035647 EF-G domain III/V-like APT56_04055 IPR035649 EFG, domain V APT56_04055 IPR004161 Translation elongation factor EFTu-like, domain 2 APT56_04055 IPR031157 Tr-type G domain, conserved site APT56_04055 IPR005517 Translation elongation factor EFG/EF2, domain IV APT56_04055 IPR020568 Ribosomal protein S5 domain 2-type fold APT56_04055 IPR004540 Translation elongation factor EFG/EF2 APT56_04055 IPR009000 Translation protein, beta-barrel domain superfamily APT56_04055 IPR000795 Transcription factor, GTP-binding domain APT56_04055 IPR005225 Small GTP-binding protein domain APT56_04055 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APT56_04055 IPR009022 Elongation factor G, domain III APT56_04055 IPR000640 Elongation factor EFG, domain V-like APT56_04055 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_04055 IPR041095 Elongation Factor G, domain II APT56_04065 IPR019888 Transcription regulator AsnC-type APT56_04065 IPR000485 AsnC-type HTH domain APT56_04065 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_04065 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain APT56_04065 IPR011008 Dimeric alpha-beta barrel APT56_04065 IPR019885 Transcription regulator HTH, AsnC-type, conserved site APT56_04065 IPR036390 Winged helix DNA-binding domain superfamily APT56_04080 IPR003593 AAA+ ATPase domain APT56_04080 IPR003439 ABC transporter-like APT56_04080 IPR017871 ABC transporter, conserved site APT56_04080 IPR015863 ABC transporter, hemin import, HmuV APT56_04080 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_04085 IPR037294 ABC transporter, BtuC-like APT56_04085 IPR000522 ABC transporter, permease protein, BtuC-like APT56_04095 IPR006665 OmpA-like domain APT56_04095 IPR039001 Peptidoglycan-associated lipoprotein APT56_04095 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal APT56_04095 IPR006664 Outer membrane protein, bacterial APT56_04095 IPR006690 Outer membrane protein, OmpA-like, conserved site APT56_04095 IPR036737 OmpA-like domain superfamily APT56_04100 IPR011042 Six-bladed beta-propeller, TolB-like APT56_04100 IPR014167 Tol-Pal system protein TolB APT56_04100 IPR011659 WD40-like Beta Propeller APT56_04100 IPR007195 TolB, N-terminal APT56_04100 IPR036752 TolB, N-terminal domain superfamily APT56_04110 IPR014168 Tol-Pal system protein TolR APT56_04110 IPR003400 Biopolymer transport protein ExbD/TolR APT56_04115 IPR002898 MotA/TolQ/ExbB proton channel APT56_04115 IPR014163 Tol-Pal system, TolQ APT56_04120 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family APT56_04120 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase APT56_04120 IPR006683 Thioesterase domain APT56_04120 IPR029069 HotDog domain superfamily APT56_04120 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site APT56_04125 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 APT56_04125 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type APT56_04125 IPR006195 Aminoacyl-tRNA synthetase, class II APT56_04125 IPR036621 Anticodon-binding domain superfamily APT56_04125 IPR004154 Anticodon-binding APT56_04125 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily APT56_04125 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) APT56_04125 IPR002316 Proline-tRNA ligase, class IIa APT56_04125 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain APT56_04125 IPR033730 Prokaryote proline-tRNA ligase core domain APT56_04130 IPR020084 NUDIX hydrolase, conserved site APT56_04130 IPR000086 NUDIX hydrolase domain APT56_04130 IPR015797 NUDIX hydrolase-like domain superfamily APT56_04130 IPR022927 RNA pyrophosphohydrolase RppH APT56_04130 IPR020476 NUDIX hydrolase APT56_04135 IPR011006 CheY-like superfamily APT56_04135 IPR001867 OmpR/PhoB-type DNA-binding domain APT56_04135 IPR016032 Signal transduction response regulator, C-terminal effector APT56_04135 IPR001789 Signal transduction response regulator, receiver domain APT56_04135 IPR039420 Transcriptional regulatory protein WalR-like APT56_04135 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_04140 IPR005467 Histidine kinase domain APT56_04140 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APT56_04140 IPR003594 Histidine kinase/HSP90-like ATPase APT56_04140 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain APT56_04140 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily APT56_04140 IPR004358 Signal transduction histidine kinase-related protein, C-terminal APT56_04150 IPR002823 Protein of unknown function DUF112, transmembrane APT56_04155 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain APT56_04155 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site APT56_04155 IPR023514 Glyoxylate/hydroxypyruvate reductase A APT56_04155 IPR036291 NAD(P)-binding domain superfamily APT56_04160 IPR000847 Transcription regulator HTH, LysR APT56_04160 IPR005119 LysR, substrate-binding APT56_04160 IPR036390 Winged helix DNA-binding domain superfamily APT56_04160 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_04165 IPR029039 Flavoprotein-like superfamily APT56_04165 IPR003680 Flavodoxin-like fold APT56_04165 IPR023048 NADH-azoreductase, FMN-dependent APT56_04170 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain APT56_04170 IPR036291 NAD(P)-binding domain superfamily APT56_04170 IPR015815 3-hydroxyisobutyrate dehydrogenase-related APT56_04170 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site APT56_04170 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily APT56_04170 IPR013328 6-phosphogluconate dehydrogenase, domain 2 APT56_04170 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding APT56_04175 IPR000101 Gamma-glutamyltranspeptidase APT56_04175 IPR029055 Nucleophile aminohydrolases, N-terminal APT56_04180 IPR002823 Protein of unknown function DUF112, transmembrane APT56_04210 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt APT56_04215 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase APT56_04215 IPR042096 Dihydroxy-acid dehydratase, C-terminal APT56_04215 IPR004404 Dihydroxy-acid dehydratase APT56_04215 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site APT56_04215 IPR037237 IlvD/EDD, N-terminal domain APT56_04220 IPR036909 Cytochrome c-like domain superfamily APT56_04220 IPR009056 Cytochrome c-like domain APT56_04220 IPR002324 Cytochrome c, class ID APT56_04225 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily APT56_04225 IPR002569 Peptide methionine sulphoxide reductase MsrA APT56_04230 IPR005956 4-hydroxyphenylpyruvate dioxygenase APT56_04230 IPR041735 4-hydroxyphenylpyruvate dioxygenase, C-terminal APT56_04230 IPR041736 4-hydroxyphenylpyruvate dioxygenase, N-terminal APT56_04230 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APT56_04230 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain APT56_04230 IPR037523 Vicinal oxygen chelate (VOC) domain APT56_04235 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain APT56_04235 IPR011991 ArsR-like helix-turn-helix domain APT56_04235 IPR000485 AsnC-type HTH domain APT56_04235 IPR011008 Dimeric alpha-beta barrel APT56_04235 IPR019888 Transcription regulator AsnC-type APT56_04235 IPR036390 Winged helix DNA-binding domain superfamily APT56_04235 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_04235 IPR019885 Transcription regulator HTH, AsnC-type, conserved site APT56_04280 IPR002933 Peptidase M20 APT56_04280 IPR011650 Peptidase M20, dimerisation domain APT56_04280 IPR017439 Amidohydrolase APT56_04280 IPR036264 Bacterial exopeptidase dimerisation domain APT56_04285 IPR006680 Amidohydrolase-related APT56_04285 IPR004721 Dihydroorotase homodimeric type APT56_04285 IPR002195 Dihydroorotase, conserved site APT56_04285 IPR032466 Metal-dependent hydrolase APT56_04300 IPR035642 MraZ, N-terminal APT56_04300 IPR038619 MraZ superfamily APT56_04300 IPR035644 MraZ, C-terminal APT56_04300 IPR020603 MraZ domain APT56_04300 IPR007159 SpoVT-AbrB domain APT56_04300 IPR003444 Transcriptional regulator MraZ APT56_04300 IPR037914 SpoVT-AbrB domain superfamily APT56_04305 IPR002903 Ribosomal RNA small subunit methyltransferase H APT56_04305 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily APT56_04305 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT56_04310 IPR011922 Cell division protein FtsL APT56_04315 IPR001460 Penicillin-binding protein, transpeptidase APT56_04315 IPR012338 Beta-lactamase/transpeptidase-like APT56_04315 IPR037532 Peptidoglycan D,D-transpeptidase FtsI APT56_04315 IPR036138 Penicillin-binding protein, dimerisation domain superfamily APT56_04315 IPR005311 Penicillin-binding protein, dimerisation domain APT56_04320 IPR004101 Mur ligase, C-terminal APT56_04320 IPR036615 Mur ligase, C-terminal domain superfamily APT56_04320 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase APT56_04320 IPR036565 Mur-like, catalytic domain superfamily APT56_04320 IPR013221 Mur ligase, central APT56_04320 IPR035911 MurE/MurF, N-terminal APT56_04325 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site APT56_04325 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase APT56_04325 IPR000715 Glycosyl transferase, family 4 APT56_04330 IPR036565 Mur-like, catalytic domain superfamily APT56_04330 IPR004101 Mur ligase, C-terminal APT56_04330 IPR036615 Mur ligase, C-terminal domain superfamily APT56_04330 IPR013221 Mur ligase, central APT56_04330 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase APT56_04330 IPR018109 Folylpolyglutamate synthetase, conserved site APT56_04335 IPR013437 Probable peptidoglycan glycosyltransferase FtsW APT56_04335 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA APT56_04340 IPR004276 Glycosyltransferase family 28, N-terminal domain APT56_04340 IPR006009 N-acetylglucosaminyltransferase, MurG APT56_04340 IPR007235 Glycosyl transferase, family 28, C-terminal APT56_04345 IPR004101 Mur ligase, C-terminal APT56_04345 IPR036615 Mur ligase, C-terminal domain superfamily APT56_04345 IPR005758 UDP-N-acetylmuramate--L-alanine ligase APT56_04345 IPR036565 Mur-like, catalytic domain superfamily APT56_04345 IPR013221 Mur ligase, central APT56_04345 IPR000713 Mur ligase, N-terminal catalytic domain APT56_04350 IPR016185 Pre-ATP-grasp domain superfamily APT56_04350 IPR011127 D-alanine--D-alanine ligase, N-terminal domain APT56_04350 IPR011095 D-alanine--D-alanine ligase, C-terminal APT56_04350 IPR005905 D-alanine--D-alanine ligase APT56_04350 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site APT56_04350 IPR013815 ATP-grasp fold, subdomain 1 APT56_04350 IPR011761 ATP-grasp fold APT56_04355 IPR026579 Cell division protein FtsQ APT56_04355 IPR005548 Cell division protein FtsQ/DivIB APT56_04355 IPR013685 POTRA domain, FtsQ-type APT56_04355 IPR034746 POTRA domain APT56_04360 IPR020823 Cell division protein FtsA APT56_04360 IPR003494 SHS2 domain inserted in FtsA APT56_04365 IPR008280 Tubulin/FtsZ, C-terminal APT56_04365 IPR003008 Tubulin/FtsZ, GTPase domain APT56_04365 IPR024757 Cell division protein FtsZ, C-terminal APT56_04365 IPR036525 Tubulin/FtsZ, GTPase domain superfamily APT56_04365 IPR020805 Cell division protein FtsZ, conserved site APT56_04365 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain APT56_04365 IPR000158 Cell division protein FtsZ APT56_04370 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal APT56_04370 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal APT56_04370 IPR020568 Ribosomal protein S5 domain 2-type fold APT56_04370 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase APT56_04380 IPR013731 Opacity-associated protein A, N-terminal APT56_04380 IPR016047 Peptidase M23 APT56_04380 IPR018392 LysM domain APT56_04380 IPR011055 Duplicated hybrid motif APT56_04385 IPR020937 SecA conserved site APT56_04385 IPR011116 SecA Wing/Scaffold APT56_04385 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_04385 IPR036266 SecA, Wing/Scaffold superfamily APT56_04385 IPR004027 SEC-C motif APT56_04385 IPR000185 Protein translocase subunit SecA APT56_04385 IPR036670 SecA, preprotein cross-linking domain superfamily APT56_04385 IPR011115 SecA DEAD-like, N-terminal APT56_04385 IPR014018 SecA motor DEAD APT56_04385 IPR011130 SecA, preprotein cross-linking domain APT56_04395 IPR011711 GntR, C-terminal APT56_04395 IPR008920 Transcription regulator FadR/GntR, C-terminal APT56_04395 IPR000524 Transcription regulator HTH, GntR APT56_04395 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_04395 IPR036390 Winged helix DNA-binding domain superfamily APT56_04400 IPR042100 Bordetella uptake gene, domain 1 APT56_04400 IPR005064 Bordetella uptake gene APT56_04405 IPR000399 TPP-binding enzyme, conserved site APT56_04405 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain APT56_04405 IPR029035 DHS-like NAD/FAD-binding domain superfamily APT56_04405 IPR029061 Thiamin diphosphate-binding fold APT56_04405 IPR012000 Thiamine pyrophosphate enzyme, central domain APT56_04405 IPR012846 Acetolactate synthase, large subunit, biosynthetic APT56_04405 IPR039368 Acetolactate synthase large subunit, TPP binding domain APT56_04405 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding APT56_04415 IPR002347 Short-chain dehydrogenase/reductase SDR APT56_04415 IPR036291 NAD(P)-binding domain superfamily APT56_04415 IPR020904 Short-chain dehydrogenase/reductase, conserved site APT56_04420 IPR019888 Transcription regulator AsnC-type APT56_04420 IPR011008 Dimeric alpha-beta barrel APT56_04420 IPR000485 AsnC-type HTH domain APT56_04420 IPR011991 ArsR-like helix-turn-helix domain APT56_04420 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_04420 IPR036390 Winged helix DNA-binding domain superfamily APT56_04420 IPR019885 Transcription regulator HTH, AsnC-type, conserved site APT56_04420 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain APT56_04430 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP APT56_04430 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel APT56_04435 IPR006668 Magnesium transporter, MgtE intracellular domain APT56_04435 IPR000644 CBS domain APT56_04435 IPR038076 MgtE, N-terminal domain superfamily APT56_04435 IPR006669 Magnesium transporter MgtE APT56_04435 IPR038048 Magnesium transporter MgtE, transmembrane domain APT56_04435 IPR006667 SLC41 divalent cation transporters, integral membrane domain APT56_04435 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily APT56_04440 IPR006683 Thioesterase domain APT56_04440 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain APT56_04440 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase APT56_04440 IPR029069 HotDog domain superfamily APT56_04445 IPR018383 Uncharacterised protein family UPF0324, prokaryote APT56_04445 IPR004630 Uncharacterised protein family UPF0324, bacteria APT56_04450 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_04450 IPR036390 Winged helix DNA-binding domain superfamily APT56_04450 IPR000847 Transcription regulator HTH, LysR APT56_04450 IPR005119 LysR, substrate-binding APT56_04455 IPR011650 Peptidase M20, dimerisation domain APT56_04455 IPR017439 Amidohydrolase APT56_04455 IPR002933 Peptidase M20 APT56_04455 IPR036264 Bacterial exopeptidase dimerisation domain APT56_04460 IPR020845 AMP-binding, conserved site APT56_04460 IPR000873 AMP-dependent synthetase/ligase APT56_04460 IPR025110 AMP-binding enzyme, C-terminal domain APT56_04460 IPR042099 AMP-dependent synthetase-like superfamily APT56_04465 IPR022337 Inositol monophosphatase, SuhB APT56_04465 IPR020550 Inositol monophosphatase, conserved site APT56_04465 IPR020583 Inositol monophosphatase, metal-binding site APT56_04465 IPR000760 Inositol monophosphatase-like APT56_04465 IPR033942 Inositol monophosphatase APT56_04470 IPR008471 MnmC-like methyltransferase APT56_04470 IPR006076 FAD dependent oxidoreductase APT56_04470 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC APT56_04470 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal APT56_04470 IPR036188 FAD/NAD(P)-binding domain superfamily APT56_04475 IPR025887 Glycoside hydrolase family 31, N-terminal domain APT56_04475 IPR011013 Galactose mutarotase-like domain superfamily APT56_04475 IPR017853 Glycoside hydrolase superfamily APT56_04475 IPR000322 Glycoside hydrolase family 31 APT56_04475 IPR013780 Glycosyl hydrolase, all-beta APT56_04480 IPR003593 AAA+ ATPase domain APT56_04480 IPR018449 NIL domain APT56_04480 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal APT56_04480 IPR017871 ABC transporter, conserved site APT56_04480 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_04480 IPR003439 ABC transporter-like APT56_04480 IPR026253 Methionine import ATP-binding protein MetN APT56_04480 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain APT56_04485 IPR035906 MetI-like superfamily APT56_04485 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_04490 IPR004872 Lipoprotein NlpA family APT56_04510 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily APT56_04510 IPR004090 Chemotaxis methyl-accepting receptor APT56_04510 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding APT56_04510 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain APT56_04510 IPR003660 HAMP domain APT56_04510 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site APT56_04515 IPR000847 Transcription regulator HTH, LysR APT56_04515 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_04515 IPR005119 LysR, substrate-binding APT56_04515 IPR036390 Winged helix DNA-binding domain superfamily APT56_04525 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_04525 IPR036390 Winged helix DNA-binding domain superfamily APT56_04525 IPR002481 Ferric-uptake regulator APT56_04540 IPR005358 Putative zinc- or iron-chelating domain containing protein APT56_04545 IPR005019 Methyladenine glycosylase APT56_04545 IPR004597 DNA-3-methyladenine glycosylase I APT56_04545 IPR011257 DNA glycosylase APT56_04550 IPR012160 Lipoteichoic acid synthase-like APT56_04550 IPR017850 Alkaline-phosphatase-like, core domain superfamily APT56_04550 IPR000917 Sulfatase, N-terminal APT56_04555 IPR007844 AsmA APT56_04560 IPR029787 Nucleotide cyclase APT56_04560 IPR000160 GGDEF domain APT56_04560 IPR033416 Periplasmic sensor domain CHASE7 APT56_04570 IPR002347 Short-chain dehydrogenase/reductase SDR APT56_04570 IPR020904 Short-chain dehydrogenase/reductase, conserved site APT56_04570 IPR036291 NAD(P)-binding domain superfamily APT56_04585 IPR029039 Flavoprotein-like superfamily APT56_04585 IPR023048 NADH-azoreductase, FMN-dependent APT56_04585 IPR003680 Flavodoxin-like fold APT56_04595 IPR006664 Outer membrane protein, bacterial APT56_04595 IPR006665 OmpA-like domain APT56_04595 IPR007055 BON domain APT56_04595 IPR006690 Outer membrane protein, OmpA-like, conserved site APT56_04595 IPR036737 OmpA-like domain superfamily APT56_04600 IPR001533 Pterin 4 alpha carbinolamine dehydratase APT56_04600 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily APT56_04615 IPR002938 FAD-binding domain APT56_04615 IPR036188 FAD/NAD(P)-binding domain superfamily APT56_04625 IPR029044 Nucleotide-diphospho-sugar transferases APT56_04625 IPR005835 Nucleotidyl transferase domain APT56_04630 IPR002575 Aminoglycoside phosphotransferase APT56_04630 IPR011009 Protein kinase-like domain superfamily APT56_04635 IPR020889 LPS-assembly protein LptD APT56_04635 IPR007543 LptD, C-terminal APT56_04640 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type APT56_04640 IPR015391 SurA N-terminal APT56_04640 IPR023034 Peptidyl-prolyl isomerase SurA APT56_04640 IPR027304 Trigger factor/SurA domain superfamily APT56_04645 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal APT56_04645 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site APT56_04645 IPR023165 rRNA adenine dimethylase-like APT56_04645 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm APT56_04645 IPR011530 Ribosomal RNA adenine dimethylase APT56_04645 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT56_04650 IPR004381 Glycerate kinase APT56_04650 IPR018197 Glycerate kinase, restriction-enzyme-like fold APT56_04650 IPR036129 Glycerate kinase superfamily APT56_04650 IPR018193 Glycerate kinase, flavodoxin-like fold APT56_04655 IPR015795 Pyruvate kinase, C-terminal APT56_04655 IPR040442 Pyruvate kinase-like domain superfamily APT56_04655 IPR011037 Pyruvate kinase-like, insert domain superfamily APT56_04655 IPR018209 Pyruvate kinase, active site APT56_04655 IPR015793 Pyruvate kinase, barrel APT56_04655 IPR001697 Pyruvate kinase APT56_04655 IPR036918 Pyruvate kinase, C-terminal domain superfamily APT56_04655 IPR015806 Pyruvate kinase, insert domain superfamily APT56_04655 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily APT56_04660 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain APT56_04670 IPR036821 Peptide deformylase superfamily APT56_04670 IPR023635 Peptide deformylase APT56_04675 IPR018146 Glyoxalase I, conserved site APT56_04675 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain APT56_04675 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APT56_04675 IPR004361 Glyoxalase I APT56_04675 IPR037523 Vicinal oxygen chelate (VOC) domain APT56_04680 IPR012703 2-aminoethylphosphonate--pyruvate transaminase APT56_04680 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase APT56_04680 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APT56_04680 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APT56_04680 IPR015424 Pyridoxal phosphate-dependent transferase APT56_04680 IPR000192 Aminotransferase class V domain APT56_04690 IPR002123 Phospholipid/glycerol acyltransferase APT56_04690 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase APT56_04695 IPR023214 HAD superfamily APT56_04695 IPR006549 HAD-superfamily hydrolase,subfamily IIIA APT56_04695 IPR036412 HAD-like superfamily APT56_04695 IPR006543 Histidinol-phosphate phosphatase APT56_04695 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase APT56_04700 IPR015944 Glycine-tRNA ligase, beta subunit APT56_04700 IPR006194 Glycine-tRNA synthetase, heterodimeric APT56_04700 IPR008909 DALR anticodon binding APT56_04705 IPR006194 Glycine-tRNA synthetase, heterodimeric APT56_04705 IPR002310 Glycine-tRNA ligase, alpha subunit APT56_04710 IPR001753 Enoyl-CoA hydratase/isomerase APT56_04710 IPR014748 Enoyl-CoA hydratase, C-terminal APT56_04710 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site APT56_04710 IPR029045 ClpP/crotonase-like domain superfamily APT56_04720 IPR013655 PAS fold-3 APT56_04720 IPR000014 PAS domain APT56_04720 IPR001610 PAC motif APT56_04720 IPR035965 PAS domain superfamily APT56_04720 IPR000700 PAS-associated, C-terminal APT56_04720 IPR004090 Chemotaxis methyl-accepting receptor APT56_04720 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain APT56_04725 IPR003673 CoA-transferase family III APT56_04725 IPR023606 CoA-transferase family III domain superfamily APT56_04730 IPR016709 Uncharacterised protein family UPF0336 APT56_04730 IPR039569 N-terminal of MaoC-like dehydratase APT56_04730 IPR029069 HotDog domain superfamily APT56_04735 IPR002347 Short-chain dehydrogenase/reductase SDR APT56_04735 IPR020904 Short-chain dehydrogenase/reductase, conserved site APT56_04735 IPR036291 NAD(P)-binding domain superfamily APT56_04745 IPR042100 Bordetella uptake gene, domain 1 APT56_04745 IPR005064 Bordetella uptake gene APT56_04755 IPR013785 Aldolase-type TIM barrel APT56_04755 IPR004136 Nitronate monooxygenase APT56_04760 IPR005064 Bordetella uptake gene APT56_04760 IPR042100 Bordetella uptake gene, domain 1 APT56_04765 IPR000873 AMP-dependent synthetase/ligase APT56_04765 IPR042099 AMP-dependent synthetase-like superfamily APT56_04765 IPR025110 AMP-binding enzyme, C-terminal domain APT56_04765 IPR020845 AMP-binding, conserved site APT56_04765 IPR010192 2-succinylbenzoate--CoA ligase APT56_04770 IPR020613 Thiolase, conserved site APT56_04770 IPR020617 Thiolase, C-terminal APT56_04770 IPR020616 Thiolase, N-terminal APT56_04770 IPR012805 Acetyl-CoA C-acyltransferase FadA APT56_04770 IPR016039 Thiolase-like APT56_04770 IPR002155 Thiolase APT56_04770 IPR020615 Thiolase, acyl-enzyme intermediate active site APT56_04770 IPR020610 Thiolase, active site APT56_04780 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal APT56_04780 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal APT56_04780 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal APT56_04780 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily APT56_04780 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily APT56_04780 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain APT56_04785 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal APT56_04785 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal APT56_04785 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal APT56_04785 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily APT56_04785 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily APT56_04790 IPR029045 ClpP/crotonase-like domain superfamily APT56_04790 IPR014748 Enoyl-CoA hydratase, C-terminal APT56_04790 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB APT56_04790 IPR001753 Enoyl-CoA hydratase/isomerase APT56_04795 IPR005119 LysR, substrate-binding APT56_04795 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_04795 IPR036390 Winged helix DNA-binding domain superfamily APT56_04795 IPR000847 Transcription regulator HTH, LysR APT56_04800 IPR029069 HotDog domain superfamily APT56_04805 IPR003673 CoA-transferase family III APT56_04805 IPR017659 Formyl-CoA:oxalate CoA-transferase APT56_04805 IPR023606 CoA-transferase family III domain superfamily APT56_04810 IPR005000 HpcH/HpaI aldolase/citrate lyase domain APT56_04810 IPR011206 Citrate lyase beta subunit-like APT56_04810 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily APT56_04810 IPR040442 Pyruvate kinase-like domain superfamily APT56_04815 IPR011611 Carbohydrate kinase PfkB APT56_04815 IPR002139 Ribokinase/fructokinase APT56_04815 IPR029056 Ribokinase-like APT56_04815 IPR030877 Sulfofructose kinase APT56_04815 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site APT56_04820 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK APT56_04820 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily APT56_04825 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain APT56_04825 IPR025866 Polymerase A arginine-rich C-terminal domain APT56_04825 IPR010206 Poly(A) polymerase I APT56_04825 IPR002646 Poly A polymerase, head domain APT56_04835 IPR020591 Chromosomal replication control, initiator DnaA-like APT56_04835 IPR022864 DnaA regulatory inactivator Hda, Enterobacteriaceae APT56_04835 IPR017788 DnaA regulatory inactivator Hda APT56_04835 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_04835 IPR013317 Chromosomal replication initiator protein DnaA APT56_04840 IPR036676 PurM-like, C-terminal domain superfamily APT56_04840 IPR010918 PurM-like, C-terminal domain APT56_04840 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase APT56_04840 IPR036921 PurM-like, N-terminal domain superfamily APT56_04840 IPR016188 PurM-like, N-terminal domain APT56_04850 IPR039657 Dimethylallyltransferase APT56_04850 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_04850 IPR018022 IPP transferase APT56_04855 IPR020667 DNA mismatch repair protein, MutL APT56_04855 IPR020568 Ribosomal protein S5 domain 2-type fold APT56_04855 IPR013507 DNA mismatch repair protein, S5 domain 2-like APT56_04855 IPR002099 DNA mismatch repair protein family, N-terminal APT56_04855 IPR014762 DNA mismatch repair, conserved site APT56_04855 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APT56_04855 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms APT56_04855 IPR014790 MutL, C-terminal, dimerisation APT56_04855 IPR042120 MutL, C-terminal domain, dimerisation subdomain APT56_04855 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APT56_04855 IPR037198 MutL, C-terminal domain superfamily APT56_04855 IPR042121 MutL, C-terminal domain, regulatory subdomain APT56_04860 IPR032816 SNARE associated Golgi protein APT56_04860 IPR032818 DedA family APT56_04865 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily APT56_04865 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor APT56_04865 IPR000531 TonB-dependent receptor-like, beta-barrel APT56_04865 IPR037066 TonB-dependent receptor, plug domain superfamily APT56_04865 IPR012910 TonB-dependent receptor, plug domain APT56_04865 IPR010917 TonB-dependent receptor, conserved site APT56_04865 IPR039426 Vitamin B12 transporter BtuB-like APT56_04870 IPR021731 AMIN domain APT56_04870 IPR006311 Twin-arginine translocation pathway, signal sequence APT56_04870 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain APT56_04875 IPR018951 Fumarase C, C-terminal APT56_04875 IPR008948 L-Aspartase-like APT56_04875 IPR020557 Fumarate lyase, conserved site APT56_04875 IPR000362 Fumarate lyase family APT56_04875 IPR022761 Fumarate lyase, N-terminal APT56_04875 IPR005677 Fumarate hydratase, class II APT56_04875 IPR024083 Fumarase/histidase, N-terminal APT56_04885 IPR042100 Bordetella uptake gene, domain 1 APT56_04885 IPR005064 Bordetella uptake gene APT56_04890 IPR005119 LysR, substrate-binding APT56_04890 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_04890 IPR000847 Transcription regulator HTH, LysR APT56_04890 IPR036390 Winged helix DNA-binding domain superfamily APT56_04895 IPR000101 Gamma-glutamyltranspeptidase APT56_04895 IPR029055 Nucleophile aminohydrolases, N-terminal APT56_04900 IPR002293 Amino acid/polyamine transporter I APT56_04900 IPR004758 Amino acid transporter APT56_04905 IPR003673 CoA-transferase family III APT56_04905 IPR023606 CoA-transferase family III domain superfamily APT56_04910 IPR042100 Bordetella uptake gene, domain 1 APT56_04910 IPR005064 Bordetella uptake gene APT56_04915 IPR034184 Putative acyl-CoA dehydrogenase AidB APT56_04915 IPR041504 Adaptive response protein AidB, N-terminal APT56_04915 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal APT56_04915 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal APT56_04915 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain APT56_04915 IPR006089 Acyl-CoA dehydrogenase, conserved site APT56_04915 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily APT56_04920 IPR005119 LysR, substrate-binding APT56_04920 IPR036390 Winged helix DNA-binding domain superfamily APT56_04920 IPR037411 HTH-type transcriptional regulator AlsR, PBP2 domain APT56_04920 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_04920 IPR000847 Transcription regulator HTH, LysR APT56_04925 IPR004810 Formyltetrahydrofolate deformylase APT56_04925 IPR002376 Formyl transferase, N-terminal APT56_04925 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain APT56_04925 IPR002912 ACT domain APT56_04925 IPR036477 Formyl transferase, N-terminal domain superfamily APT56_04930 IPR036188 FAD/NAD(P)-binding domain superfamily APT56_04930 IPR030862 L-2-hydroxyglutarate dehydrogenase APT56_04930 IPR006076 FAD dependent oxidoreductase APT56_04935 IPR012349 FMN-binding split barrel APT56_04935 IPR036390 Winged helix DNA-binding domain superfamily APT56_04935 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_04935 IPR002563 Flavin reductase like domain APT56_04940 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site APT56_04940 IPR012349 FMN-binding split barrel APT56_04940 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal APT56_04940 IPR000659 Pyridoxamine 5'-phosphate oxidase APT56_04940 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative APT56_04950 IPR036259 MFS transporter superfamily APT56_04950 IPR005829 Sugar transporter, conserved site APT56_04950 IPR011701 Major facilitator superfamily APT56_04950 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG APT56_04950 IPR020846 Major facilitator superfamily domain APT56_04955 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APT56_04955 IPR030190 Macrolide export protein MacA APT56_04955 IPR006143 RND efflux pump, membrane fusion protein APT56_04960 IPR003593 AAA+ ATPase domain APT56_04960 IPR017871 ABC transporter, conserved site APT56_04960 IPR017911 ABC transporter, macrolide export, ATP-binding domain APT56_04960 IPR025857 MacB-like periplasmic core domain APT56_04960 IPR003838 ABC transporter permease protein domain APT56_04960 IPR003439 ABC transporter-like APT56_04960 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_04965 IPR003423 Outer membrane efflux protein APT56_04965 IPR010131 RND efflux system, outer membrane lipoprotein, NodT APT56_04970 IPR036390 Winged helix DNA-binding domain superfamily APT56_04970 IPR000847 Transcription regulator HTH, LysR APT56_04970 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_04970 IPR005119 LysR, substrate-binding APT56_04980 IPR017871 ABC transporter, conserved site APT56_04980 IPR011924 Lipoprotein releasing system, ATP-binding protein APT56_04980 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_04980 IPR003593 AAA+ ATPase domain APT56_04980 IPR015854 ABC transporter, lipoprotein release, LolD APT56_04980 IPR003439 ABC transporter-like APT56_04985 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_04985 IPR017911 ABC transporter, macrolide export, ATP-binding domain APT56_04985 IPR003439 ABC transporter-like APT56_04985 IPR003838 ABC transporter permease protein domain APT56_04985 IPR003593 AAA+ ATPase domain APT56_04985 IPR025857 MacB-like periplasmic core domain APT56_04985 IPR017871 ABC transporter, conserved site APT56_04995 IPR022824 Multidrug resistance protein MdtA APT56_04995 IPR039562 Membrane fusion protein, biotin-lipoyl like domain APT56_04995 IPR006143 RND efflux pump, membrane fusion protein APT56_05000 IPR000594 THIF-type NAD/FAD binding fold APT56_05000 IPR035985 Ubiquitin-activating enzyme APT56_05005 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily APT56_05005 IPR017941 Rieske [2Fe-2S] iron-sulphur domain APT56_05010 IPR037401 SnoaL-like domain APT56_05010 IPR032710 NTF2-like domain superfamily APT56_05010 IPR000391 Ring-hydroxylating dioxygenase beta subunit APT56_05015 IPR017941 Rieske [2Fe-2S] iron-sulphur domain APT56_05015 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily APT56_05015 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site APT56_05015 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit APT56_05015 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain APT56_05020 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_05020 IPR000847 Transcription regulator HTH, LysR APT56_05020 IPR036390 Winged helix DNA-binding domain superfamily APT56_05020 IPR005119 LysR, substrate-binding APT56_05030 IPR015890 Chorismate-utilising enzyme, C-terminal APT56_05030 IPR006805 Anthranilate synthase component I, N-terminal APT56_05030 IPR019999 Anthranilate synthase component I-like APT56_05030 IPR005801 ADC synthase APT56_05030 IPR005802 Aminodeoxychorismate synthase, component I APT56_05035 IPR041102 UvrA, interaction domain APT56_05035 IPR003439 ABC transporter-like APT56_05035 IPR017871 ABC transporter, conserved site APT56_05035 IPR003593 AAA+ ATPase domain APT56_05035 IPR041552 UvrA DNA-binding domain APT56_05035 IPR004602 UvrABC system subunit A APT56_05035 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_05045 IPR031338 KDPG/KHG aldolase, active site 2 APT56_05045 IPR013785 Aldolase-type TIM barrel APT56_05045 IPR000887 KDPG/KHG aldolase APT56_05050 IPR002139 Ribokinase/fructokinase APT56_05050 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site APT56_05050 IPR029056 Ribokinase-like APT56_05050 IPR011611 Carbohydrate kinase PfkB APT56_05055 IPR005119 LysR, substrate-binding APT56_05055 IPR000847 Transcription regulator HTH, LysR APT56_05055 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_05055 IPR036390 Winged helix DNA-binding domain superfamily APT56_05060 IPR029044 Nucleotide-diphospho-sugar transferases APT56_05060 IPR001173 Glycosyltransferase 2-like APT56_05065 IPR003593 AAA+ ATPase domain APT56_05065 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_05065 IPR003439 ABC transporter-like APT56_05065 IPR017871 ABC transporter, conserved site APT56_05065 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein APT56_05070 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal APT56_05070 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_05070 IPR003593 AAA+ ATPase domain APT56_05070 IPR003439 ABC transporter-like APT56_05070 IPR017871 ABC transporter, conserved site APT56_05085 IPR020904 Short-chain dehydrogenase/reductase, conserved site APT56_05085 IPR002347 Short-chain dehydrogenase/reductase SDR APT56_05085 IPR036291 NAD(P)-binding domain superfamily APT56_05090 IPR007325 Kynurenine formamidase/cyclase-like APT56_05090 IPR037175 Kynurenine formamidase superfamily APT56_05105 IPR042099 AMP-dependent synthetase-like superfamily APT56_05105 IPR023456 Crotonobetaine/carnitine-CoA ligase CaiC APT56_05105 IPR000873 AMP-dependent synthetase/ligase APT56_05105 IPR020845 AMP-binding, conserved site APT56_05105 IPR025110 AMP-binding enzyme, C-terminal domain APT56_05110 IPR032710 NTF2-like domain superfamily APT56_05110 IPR017641 Benzoate 1,2-dioxygenase, small subunit APT56_05110 IPR000391 Ring-hydroxylating dioxygenase beta subunit APT56_05115 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain APT56_05115 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit APT56_05115 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily APT56_05115 IPR017639 Benzoate 1,2-dioxygenase, large subunit APT56_05115 IPR017941 Rieske [2Fe-2S] iron-sulphur domain APT56_05115 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site APT56_05120 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain APT56_05120 IPR000951 Phthalate dioxygenase reductase APT56_05120 IPR017927 FAD-binding domain, ferredoxin reductase-type APT56_05120 IPR017938 Riboflavin synthase-like beta-barrel APT56_05120 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site APT56_05120 IPR036010 2Fe-2S ferredoxin-like superfamily APT56_05120 IPR012675 Beta-grasp domain superfamily APT56_05120 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain APT56_05140 IPR000914 Solute-binding protein family 5 domain APT56_05140 IPR039424 Solute-binding protein family 5 APT56_05140 IPR030678 Peptide/nickel binding protein, MppA-type APT56_05150 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_05150 IPR025966 Oligopeptide transport permease C-like, N-terminal domain APT56_05150 IPR035906 MetI-like superfamily APT56_05155 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal APT56_05155 IPR003593 AAA+ ATPase domain APT56_05155 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_05155 IPR017871 ABC transporter, conserved site APT56_05155 IPR003439 ABC transporter-like APT56_05160 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_05160 IPR003593 AAA+ ATPase domain APT56_05160 IPR017871 ABC transporter, conserved site APT56_05160 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal APT56_05160 IPR003439 ABC transporter-like APT56_05180 IPR028345 Aminoglycoside 3-N-acetyltransferase-like APT56_05180 IPR003679 Aminoglycoside N(3)-acetyltransferase APT56_05185 IPR032781 ABC-transporter extension domain APT56_05185 IPR003593 AAA+ ATPase domain APT56_05185 IPR003439 ABC transporter-like APT56_05185 IPR017871 ABC transporter, conserved site APT56_05185 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_05185 IPR022374 Energy-dependent translational throttle protein EttA APT56_05190 IPR029060 PIN-like domain superfamily APT56_05190 IPR022907 VapC family APT56_05190 IPR002716 PIN domain APT56_05205 IPR005527 Cell division topological specificity factor MinE APT56_05205 IPR036707 Cell division topological specificity factor MinE superfamily APT56_05210 IPR010223 ATP binding protein MinD, bacterial-type APT56_05210 IPR025501 ATP binding protein MinD APT56_05210 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain APT56_05210 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_05215 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal APT56_05215 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily APT56_05215 IPR007874 Septum formation inhibitor MinC, N-terminal APT56_05215 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily APT56_05215 IPR005526 Septum formation inhibitor MinC, C-terminal APT56_05215 IPR013033 Septum formation inhibitor MinC APT56_05220 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_05220 IPR005471 Transcription regulator IclR, N-terminal APT56_05220 IPR014757 Transcription regulator IclR, C-terminal APT56_05220 IPR029016 GAF-like domain superfamily APT56_05220 IPR036390 Winged helix DNA-binding domain superfamily APT56_05230 IPR003673 CoA-transferase family III APT56_05230 IPR023606 CoA-transferase family III domain superfamily APT56_05235 IPR042100 Bordetella uptake gene, domain 1 APT56_05235 IPR005064 Bordetella uptake gene APT56_05240 IPR022861 Glutamine-tRNA ligase, bacterial APT56_05240 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal APT56_05240 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily APT56_05240 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain APT56_05240 IPR004514 Glutamine-tRNA synthetase APT56_05240 IPR000924 Glutamyl/glutaminyl-tRNA synthetase APT56_05240 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT56_05240 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain APT56_05240 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily APT56_05240 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site APT56_05250 IPR003317 Cytochrome ubiquinol oxidase subunit 2 APT56_05255 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain APT56_05255 IPR010997 HRDC-like superfamily APT56_05255 IPR001650 Helicase, C-terminal APT56_05255 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_05255 IPR002121 HRDC domain APT56_05255 IPR018982 RQC domain APT56_05255 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_05255 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial APT56_05255 IPR011545 DEAD/DEAH box helicase domain APT56_05255 IPR014001 Helicase superfamily 1/2, ATP-binding domain APT56_05255 IPR004589 DNA helicase, ATP-dependent, RecQ type APT56_05265 IPR039420 Transcriptional regulatory protein WalR-like APT56_05265 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_05265 IPR016032 Signal transduction response regulator, C-terminal effector APT56_05265 IPR011006 CheY-like superfamily APT56_05265 IPR001789 Signal transduction response regulator, receiver domain APT56_05265 IPR001867 OmpR/PhoB-type DNA-binding domain APT56_05275 IPR008824 RuvB-like P-loop domain APT56_05275 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_05275 IPR004605 DNA helicase, Holliday junction RuvB-type APT56_05275 IPR041445 RuvB, AAA lid domain APT56_05275 IPR036390 Winged helix DNA-binding domain superfamily APT56_05275 IPR003593 AAA+ ATPase domain APT56_05275 IPR008823 RuvB C-terminal winged helix domain APT56_05275 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_05280 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme APT56_05280 IPR001926 Pyridoxal-phosphate dependent enzyme APT56_05280 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site APT56_05285 IPR013549 Domain of unknown function DUF1731 APT56_05285 IPR010099 Epimerase family protein SDR39U1 APT56_05285 IPR001509 NAD-dependent epimerase/dehydratase APT56_05285 IPR036291 NAD(P)-binding domain superfamily APT56_05290 IPR036267 RuvA, C-terminal domain superfamily APT56_05290 IPR000085 Bacterial DNA recombination protein RuvA APT56_05290 IPR010994 RuvA domain 2-like APT56_05290 IPR011114 Holliday junction DNA helicase RuvA, C-terminal APT56_05290 IPR012340 Nucleic acid-binding, OB-fold APT56_05290 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial APT56_05290 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 APT56_05295 IPR012337 Ribonuclease H-like superfamily APT56_05295 IPR036397 Ribonuclease H superfamily APT56_05295 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site APT56_05295 IPR002176 Crossover junction endodeoxyribonuclease RuvC APT56_05300 IPR036914 Methylglyoxal synthase-like domain superfamily APT56_05300 IPR002695 Bifunctional purine biosynthesis protein PurH-like APT56_05300 IPR011607 Methylglyoxal synthase-like domain APT56_05300 IPR016193 Cytidine deaminase-like APT56_05300 IPR024051 AICAR transformylase, duplicated domain superfamily APT56_05305 IPR005412 DNA-binding protein Fis APT56_05305 IPR009057 Homeobox-like domain superfamily APT56_05305 IPR002197 DNA binding HTH domain, Fis-type APT56_05310 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal APT56_05310 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 APT56_05310 IPR032887 tRNA-dihydrouridine synthase B APT56_05310 IPR001269 tRNA-dihydrouridine synthase APT56_05310 IPR018517 tRNA-dihydrouridine synthase, conserved site APT56_05310 IPR035587 DUS-like, FMN-binding domain APT56_05310 IPR013785 Aldolase-type TIM barrel APT56_05315 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase APT56_05315 IPR002938 FAD-binding domain APT56_05315 IPR036188 FAD/NAD(P)-binding domain superfamily APT56_05315 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site APT56_05315 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 APT56_05325 IPR007865 Aminopeptidase P, N-terminal APT56_05325 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site APT56_05325 IPR001714 Peptidase M24, methionine aminopeptidase APT56_05325 IPR000994 Peptidase M24 APT56_05325 IPR036005 Creatinase/aminopeptidase-like APT56_05325 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal APT56_05340 IPR001757 P-type ATPase APT56_05340 IPR004014 Cation-transporting P-type ATPase, N-terminal APT56_05340 IPR023299 P-type ATPase, cytoplasmic domain N APT56_05340 IPR018303 P-type ATPase, phosphorylation site APT56_05340 IPR036412 HAD-like superfamily APT56_05340 IPR008250 P-type ATPase, A domain superfamily APT56_05340 IPR006068 Cation-transporting P-type ATPase, C-terminal APT56_05340 IPR023214 HAD superfamily APT56_05340 IPR023298 P-type ATPase, transmembrane domain superfamily APT56_05340 IPR006415 P-type ATPase, subfamily IIIB APT56_05345 IPR033900 Porin domain, Gram-negative type APT56_05345 IPR023614 Porin domain superfamily APT56_05345 IPR001702 Porin, Gram-negative type APT56_05345 IPR002299 Porin, Neisseria sp. type APT56_05355 IPR029044 Nucleotide-diphospho-sugar transferases APT56_05355 IPR005835 Nucleotidyl transferase domain APT56_05355 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type APT56_05360 IPR030873 Beta-barrel assembly-enhancing protease APT56_05360 IPR001915 Peptidase M48 APT56_05360 IPR013026 Tetratricopeptide repeat-containing domain APT56_05360 IPR011990 Tetratricopeptide-like helical domain superfamily APT56_05360 IPR019734 Tetratricopeptide repeat APT56_05380 IPR033939 Branched-chain aminotransferase APT56_05380 IPR005785 Branched-chain amino acid aminotransferase I APT56_05380 IPR001544 Aminotransferase class IV APT56_05380 IPR036038 Aminotransferase-like, PLP-dependent enzymes APT56_05380 IPR018300 Aminotransferase, class IV, conserved site APT56_05395 IPR036188 FAD/NAD(P)-binding domain superfamily APT56_05395 IPR002938 FAD-binding domain APT56_05400 IPR036259 MFS transporter superfamily APT56_05400 IPR011701 Major facilitator superfamily APT56_05400 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 APT56_05405 IPR039426 Vitamin B12 transporter BtuB-like APT56_05405 IPR012910 TonB-dependent receptor, plug domain APT56_05405 IPR010105 TonB-dependent siderophore receptor APT56_05405 IPR000531 TonB-dependent receptor-like, beta-barrel APT56_05405 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily APT56_05415 IPR001650 Helicase, C-terminal APT56_05415 IPR014001 Helicase superfamily 1/2, ATP-binding domain APT56_05415 IPR028622 ATP-dependent RNA helicase RhlE APT56_05415 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site APT56_05415 IPR014014 RNA helicase, DEAD-box type, Q motif APT56_05415 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_05415 IPR011545 DEAD/DEAH box helicase domain APT56_05435 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_05435 IPR036390 Winged helix DNA-binding domain superfamily APT56_05435 IPR005471 Transcription regulator IclR, N-terminal APT56_05435 IPR014757 Transcription regulator IclR, C-terminal APT56_05435 IPR029016 GAF-like domain superfamily APT56_05440 IPR042100 Bordetella uptake gene, domain 1 APT56_05440 IPR005064 Bordetella uptake gene APT56_05450 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 APT56_05450 IPR005719 Dihydroorotate dehydrogenase, class 2 APT56_05450 IPR013785 Aldolase-type TIM barrel APT56_05450 IPR005720 Dihydroorotate dehydrogenase domain APT56_05450 IPR001295 Dihydroorotate dehydrogenase, conserved site APT56_05455 IPR030700 N-end rule aminoacyl transferase APT56_05455 IPR007472 N-end rule aminoacyl transferase, C-terminal APT56_05455 IPR007471 N-end aminoacyl transferase, N-terminal APT56_05455 IPR016181 Acyl-CoA N-acyltransferase APT56_05455 IPR017138 Aspartate/glutamate leucyltransferase APT56_05460 IPR042203 Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal APT56_05460 IPR016181 Acyl-CoA N-acyltransferase APT56_05460 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase APT56_05470 IPR005119 LysR, substrate-binding APT56_05470 IPR036390 Winged helix DNA-binding domain superfamily APT56_05470 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_05470 IPR000847 Transcription regulator HTH, LysR APT56_05515 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APT56_05515 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_05515 IPR015424 Pyridoxal phosphate-dependent transferase APT56_05515 IPR004839 Aminotransferase, class I/classII APT56_05515 IPR000524 Transcription regulator HTH, GntR APT56_05515 IPR036390 Winged helix DNA-binding domain superfamily APT56_05525 IPR003680 Flavodoxin-like fold APT56_05525 IPR029039 Flavoprotein-like superfamily APT56_05525 IPR023048 NADH-azoreductase, FMN-dependent APT56_05540 IPR016167 FAD-binding, type PCMH, subdomain 1 APT56_05540 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily APT56_05540 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal APT56_05540 IPR006094 FAD linked oxidase, N-terminal APT56_05540 IPR016166 FAD-binding domain, PCMH-type APT56_05540 IPR036318 FAD-binding, type PCMH-like superfamily APT56_05540 IPR016169 FAD-binding, type PCMH, subdomain 2 APT56_05540 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase APT56_05545 IPR022664 Dihydrodipicolinate reductase, conserved site APT56_05545 IPR023940 Dihydrodipicolinate reductase APT56_05545 IPR000846 Dihydrodipicolinate reductase, N-terminal APT56_05545 IPR022663 Dihydrodipicolinate reductase, C-terminal APT56_05545 IPR036291 NAD(P)-binding domain superfamily APT56_05550 IPR037873 BamE-like APT56_05550 IPR007450 Lipoprotein SmpA/OmlA APT56_05550 IPR026592 Outer membrane protein assembly factor BamE APT56_05555 IPR036390 Winged helix DNA-binding domain superfamily APT56_05555 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_05555 IPR002481 Ferric-uptake regulator APT56_05560 IPR003395 RecF/RecN/SMC, N-terminal APT56_05560 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_05560 IPR004604 DNA recombination/repair protein RecN APT56_05565 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal APT56_05565 IPR002504 NAD kinase APT56_05565 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal APT56_05565 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily APT56_05570 IPR029016 GAF-like domain superfamily APT56_05570 IPR002571 Heat-inducible transcription repressor HrcA APT56_05570 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily APT56_05570 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_05570 IPR036390 Winged helix DNA-binding domain superfamily APT56_05570 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain APT56_05570 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal APT56_05575 IPR033644 Ferrochelatase, C-terminal APT56_05575 IPR019772 Ferrochelatase, active site APT56_05575 IPR001015 Ferrochelatase APT56_05575 IPR033659 Ferrochelatase, N-terminal APT56_05585 IPR013805 GrpE nucleotide exchange factor, coiled-coil APT56_05585 IPR000740 GrpE nucleotide exchange factor APT56_05585 IPR009012 GrpE nucleotide exchange factor, head APT56_05595 IPR012725 Chaperone DnaK APT56_05595 IPR018181 Heat shock protein 70, conserved site APT56_05595 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily APT56_05595 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily APT56_05595 IPR013126 Heat shock protein 70 family APT56_05600 IPR036869 Chaperone J-domain superfamily APT56_05600 IPR012724 Chaperone DnaJ APT56_05600 IPR002939 Chaperone DnaJ, C-terminal APT56_05600 IPR001623 DnaJ domain APT56_05600 IPR018253 DnaJ domain, conserved site APT56_05600 IPR008971 HSP40/DnaJ peptide-binding APT56_05600 IPR001305 Heat shock protein DnaJ, cysteine-rich domain APT56_05600 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily APT56_05610 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like APT56_05610 IPR007863 Peptidase M16, C-terminal APT56_05610 IPR011765 Peptidase M16, N-terminal APT56_05610 IPR001431 Peptidase M16, zinc-binding site APT56_05615 IPR016181 Acyl-CoA N-acyltransferase APT56_05615 IPR000182 GNAT domain APT56_05625 IPR016181 Acyl-CoA N-acyltransferase APT56_05625 IPR000182 GNAT domain APT56_05635 IPR003593 AAA+ ATPase domain APT56_05635 IPR037219 Peptidase M41-like APT56_05635 IPR000642 Peptidase M41 APT56_05635 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_05635 IPR005936 Peptidase, FtsH APT56_05635 IPR003960 ATPase, AAA-type, conserved site APT56_05635 IPR003959 ATPase, AAA-type, core APT56_05635 IPR041569 AAA ATPase, AAA+ lid domain APT56_05640 IPR009056 Cytochrome c-like domain APT56_05640 IPR036909 Cytochrome c-like domain superfamily APT56_05640 IPR008168 Cytochrome c, class IC APT56_05655 IPR024084 Isopropylmalate dehydrogenase-like domain APT56_05655 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic APT56_05655 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site APT56_05665 IPR007016 O-antigen ligase-related APT56_05670 IPR020625 Schiff base-forming aldolase, active site APT56_05670 IPR002220 DapA-like APT56_05670 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA APT56_05670 IPR013785 Aldolase-type TIM barrel APT56_05685 IPR001789 Signal transduction response regulator, receiver domain APT56_05685 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_05685 IPR011006 CheY-like superfamily APT56_05685 IPR039420 Transcriptional regulatory protein WalR-like APT56_05685 IPR001867 OmpR/PhoB-type DNA-binding domain APT56_05690 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APT56_05690 IPR029016 GAF-like domain superfamily APT56_05690 IPR003018 GAF domain APT56_05690 IPR005467 Histidine kinase domain APT56_05690 IPR003594 Histidine kinase/HSP90-like ATPase APT56_05690 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain APT56_05690 IPR025201 Sensor protein KdpD, transmembrane domain APT56_05690 IPR038318 KdpD, transmembrane domain superfamily APT56_05690 IPR004358 Signal transduction histidine kinase-related protein, C-terminal APT56_05690 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal APT56_05690 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily APT56_05695 IPR003820 Potassium-transporting ATPase C chain APT56_05700 IPR036412 HAD-like superfamily APT56_05700 IPR023214 HAD superfamily APT56_05700 IPR008250 P-type ATPase, A domain superfamily APT56_05700 IPR018303 P-type ATPase, phosphorylation site APT56_05700 IPR006391 P-type ATPase, B chain, subfamily IA APT56_05700 IPR023299 P-type ATPase, cytoplasmic domain N APT56_05700 IPR001757 P-type ATPase APT56_05700 IPR023298 P-type ATPase, transmembrane domain superfamily APT56_05705 IPR004623 Potassium-transporting ATPase A chain APT56_05720 IPR038377 Sodium/glucose symporter superfamily APT56_05720 IPR001734 Sodium/solute symporter APT56_05720 IPR019899 Sodium/solute symporter, VC2705 subfamily APT56_05725 IPR000390 Small multidrug resistance protein family APT56_05730 IPR036063 Smr domain superfamily APT56_05730 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_05730 IPR005747 Endonuclease MutS2 APT56_05730 IPR036187 DNA mismatch repair protein MutS, core domain superfamily APT56_05730 IPR007696 DNA mismatch repair protein MutS, core APT56_05730 IPR000432 DNA mismatch repair protein MutS, C-terminal APT56_05730 IPR002625 Smr domain APT56_05735 IPR023753 FAD/NAD(P)-binding domain APT56_05735 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site APT56_05735 IPR005982 Thioredoxin reductase APT56_05735 IPR036188 FAD/NAD(P)-binding domain superfamily APT56_05740 IPR018541 FtsK gamma domain APT56_05740 IPR002543 FtsK domain APT56_05740 IPR041027 FtsK alpha domain APT56_05740 IPR036390 Winged helix DNA-binding domain superfamily APT56_05740 IPR025199 DNA translocase FtsK, 4TM region APT56_05740 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_05740 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_05745 IPR029046 Lipoprotein localisation LolA/LolB/LppX APT56_05745 IPR004564 Outer membrane lipoprotein carrier protein LolA-like APT56_05745 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria APT56_05750 IPR006056 RidA family APT56_05750 IPR019897 RidA, conserved site APT56_05750 IPR035959 RutC-like superfamily APT56_05750 IPR006175 YjgF/YER057c/UK114 family APT56_05755 IPR023100 D-aminoacylase, insert domain superfamily APT56_05755 IPR011059 Metal-dependent hydrolase, composite domain superfamily APT56_05755 IPR032466 Metal-dependent hydrolase APT56_05755 IPR013108 Amidohydrolase 3 APT56_05760 IPR000644 CBS domain APT56_05760 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type APT56_05760 IPR001347 Sugar isomerase (SIS) APT56_05760 IPR035474 KpsF-like, SIS domain APT56_05765 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal APT56_05765 IPR003439 ABC transporter-like APT56_05765 IPR017871 ABC transporter, conserved site APT56_05765 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_05765 IPR003593 AAA+ ATPase domain APT56_05770 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal APT56_05770 IPR003593 AAA+ ATPase domain APT56_05770 IPR003439 ABC transporter-like APT56_05770 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_05770 IPR017871 ABC transporter, conserved site APT56_05775 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_05775 IPR035906 MetI-like superfamily APT56_05775 IPR025966 Oligopeptide transport permease C-like, N-terminal domain APT56_05780 IPR035906 MetI-like superfamily APT56_05780 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_05785 IPR000914 Solute-binding protein family 5 domain APT56_05785 IPR030678 Peptide/nickel binding protein, MppA-type APT56_05785 IPR023765 Solute-binding protein family 5, conserved site APT56_05785 IPR039424 Solute-binding protein family 5 APT56_05795 IPR001110 Uncharacterised protein family UPF0012, conserved site APT56_05795 IPR036526 Carbon-nitrogen hydrolase superfamily APT56_05795 IPR003010 Carbon-nitrogen hydrolase APT56_05800 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_05800 IPR003593 AAA+ ATPase domain APT56_05800 IPR032423 AAA C-terminal domain APT56_05800 IPR003959 ATPase, AAA-type, core APT56_05800 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal APT56_05800 IPR021886 MgsA AAA+ ATPase C-terminal APT56_05805 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm APT56_05805 IPR033729 Serine-tRNA ligase catalytic core domain APT56_05805 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily APT56_05805 IPR015866 Serine-tRNA synthetase, type1, N-terminal APT56_05805 IPR002317 Serine-tRNA ligase, type1 APT56_05805 IPR006195 Aminoacyl-tRNA synthetase, class II APT56_05805 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) APT56_05825 IPR011059 Metal-dependent hydrolase, composite domain superfamily APT56_05825 IPR006680 Amidohydrolase-related APT56_05825 IPR032466 Metal-dependent hydrolase APT56_05830 IPR036390 Winged helix DNA-binding domain superfamily APT56_05830 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_05830 IPR005119 LysR, substrate-binding APT56_05830 IPR000847 Transcription regulator HTH, LysR APT56_05835 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site APT56_05835 IPR029065 Enolase C-terminal domain-like APT56_05835 IPR029017 Enolase-like, N-terminal APT56_05835 IPR036849 Enolase-like, C-terminal domain superfamily APT56_05835 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain APT56_05835 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal APT56_05835 IPR033978 L-talarate/galactarate dehydratase APT56_05840 IPR020624 Schiff base-forming aldolase, conserved site APT56_05840 IPR013785 Aldolase-type TIM barrel APT56_05840 IPR002220 DapA-like APT56_05845 IPR042100 Bordetella uptake gene, domain 1 APT56_05845 IPR005064 Bordetella uptake gene APT56_05855 IPR003148 Regulator of K+ conductance, N-terminal APT56_05855 IPR036291 NAD(P)-binding domain superfamily APT56_05855 IPR038770 Sodium/solute symporter superfamily APT56_05855 IPR020884 Glutathione-regulated potassium-efflux system protein KefB APT56_05855 IPR004771 K+/H+ exchanger APT56_05855 IPR006153 Cation/H+ exchanger APT56_05860 IPR002347 Short-chain dehydrogenase/reductase SDR APT56_05860 IPR020904 Short-chain dehydrogenase/reductase, conserved site APT56_05860 IPR036291 NAD(P)-binding domain superfamily APT56_05860 IPR011294 3-hydroxybutyrate dehydrogenase APT56_05865 IPR005583 Peroxide stress protein YaaA APT56_05870 IPR032692 Integral membrane protein YccS, N-terminal APT56_05875 IPR012846 Acetolactate synthase, large subunit, biosynthetic APT56_05875 IPR039368 Acetolactate synthase large subunit, TPP binding domain APT56_05875 IPR029035 DHS-like NAD/FAD-binding domain superfamily APT56_05875 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain APT56_05875 IPR029061 Thiamin diphosphate-binding fold APT56_05875 IPR012000 Thiamine pyrophosphate enzyme, central domain APT56_05875 IPR000399 TPP-binding enzyme, conserved site APT56_05875 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding APT56_05880 IPR019455 Acetolactate synthase, small subunit, C-terminal APT56_05880 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal APT56_05880 IPR002912 ACT domain APT56_05880 IPR039557 AHAS, ACT domain APT56_05880 IPR004789 Acetolactate synthase, small subunit APT56_05885 IPR013023 Ketol-acid reductoisomerase APT56_05885 IPR013116 Ketol-acid reductoisomerase, N-terminal APT56_05885 IPR036291 NAD(P)-binding domain superfamily APT56_05885 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily APT56_05885 IPR000506 Ketol-acid reductoisomerase, C-terminal APT56_05885 IPR014359 Ketol-acid reductoisomerase, prokaryotic APT56_05890 IPR000462 CDP-alcohol phosphatidyltransferase APT56_05890 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase APT56_05900 IPR000589 Ribosomal protein S15 APT56_05900 IPR005290 Ribosomal protein S15, bacterial-type APT56_05900 IPR009068 S15/NS1, RNA-binding APT56_05905 IPR004087 K Homology domain APT56_05905 IPR036345 Exoribonuclease, PH domain 2 superfamily APT56_05905 IPR015847 Exoribonuclease, phosphorolytic domain 2 APT56_05905 IPR004088 K Homology domain, type 1 APT56_05905 IPR012340 Nucleic acid-binding, OB-fold APT56_05905 IPR001247 Exoribonuclease, phosphorolytic domain 1 APT56_05905 IPR027408 PNPase/RNase PH domain superfamily APT56_05905 IPR003029 S1 domain APT56_05905 IPR022967 RNA-binding domain, S1 APT56_05905 IPR020568 Ribosomal protein S5 domain 2-type fold APT56_05905 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain APT56_05905 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily APT56_05905 IPR036612 K Homology domain, type 1 superfamily APT56_05905 IPR012162 Polyribonucleotide nucleotidyltransferase APT56_05915 IPR005789 Threonine dehydratase, catabolic APT56_05915 IPR002912 ACT domain APT56_05915 IPR001926 Pyridoxal-phosphate dependent enzyme APT56_05915 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site APT56_05915 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme APT56_05965 IPR000132 Nitrilase/cyanide hydratase, conserved site APT56_05965 IPR003010 Carbon-nitrogen hydrolase APT56_05965 IPR036526 Carbon-nitrogen hydrolase superfamily APT56_05970 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_05970 IPR005119 LysR, substrate-binding APT56_05970 IPR036390 Winged helix DNA-binding domain superfamily APT56_05970 IPR000847 Transcription regulator HTH, LysR APT56_05985 IPR005119 LysR, substrate-binding APT56_05985 IPR036390 Winged helix DNA-binding domain superfamily APT56_05985 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_05985 IPR000847 Transcription regulator HTH, LysR APT56_05990 IPR023606 CoA-transferase family III domain superfamily APT56_05990 IPR003673 CoA-transferase family III APT56_05995 IPR005064 Bordetella uptake gene APT56_05995 IPR042100 Bordetella uptake gene, domain 1 APT56_06000 IPR000891 Pyruvate carboxyltransferase APT56_06000 IPR013785 Aldolase-type TIM barrel APT56_06015 IPR036291 NAD(P)-binding domain superfamily APT56_06015 IPR013968 Polyketide synthase, ketoreductase domain APT56_06015 IPR020843 Polyketide synthase, enoylreductase domain APT56_06015 IPR042104 Polyketide synthase, dehydratase domain superfamily APT56_06015 IPR020807 Polyketide synthase, dehydratase domain APT56_06015 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain APT56_06015 IPR032821 Ketoacyl-synthetase, C-terminal extension APT56_06015 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding APT56_06015 IPR013154 Alcohol dehydrogenase, N-terminal APT56_06015 IPR014031 Beta-ketoacyl synthase, C-terminal APT56_06015 IPR011032 GroES-like superfamily APT56_06015 IPR020806 Polyketide synthase, phosphopantetheine-binding domain APT56_06015 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase APT56_06015 IPR014043 Acyl transferase APT56_06015 IPR036736 ACP-like superfamily APT56_06015 IPR001227 Acyl transferase domain superfamily APT56_06015 IPR014030 Beta-ketoacyl synthase, N-terminal APT56_06015 IPR015083 Polyketide synthase, docking domain APT56_06015 IPR018201 Beta-ketoacyl synthase, active site APT56_06015 IPR006162 Phosphopantetheine attachment site APT56_06015 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site APT56_06015 IPR016039 Thiolase-like APT56_06015 IPR009081 Phosphopantetheine binding ACP domain APT56_06020 IPR013785 Aldolase-type TIM barrel APT56_06020 IPR035990 Triosephosphate isomerase superfamily APT56_06020 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic APT56_06020 IPR000652 Triosephosphate isomerase APT56_06020 IPR020861 Triosephosphate isomerase, active site APT56_06025 IPR004692 Preprotein translocase SecG subunit APT56_06065 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_06065 IPR025103 Protein of unknown function DUF4011 APT56_06065 IPR041679 DNA2/NAM7 helicase-like, AAA domain APT56_06065 IPR041677 DNA2/NAM7 helicase, AAA domain APT56_06065 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_06065 IPR041677 DNA2/NAM7 helicase, AAA domain APT56_06065 IPR025103 Protein of unknown function DUF4011 APT56_06065 IPR041679 DNA2/NAM7 helicase-like, AAA domain APT56_06100 IPR010917 TonB-dependent receptor, conserved site APT56_06100 IPR011662 Secretin/TonB, short N-terminal domain APT56_06100 IPR039423 TonB-dependent receptor-like APT56_06100 IPR037066 TonB-dependent receptor, plug domain superfamily APT56_06100 IPR012910 TonB-dependent receptor, plug domain APT56_06100 IPR000531 TonB-dependent receptor-like, beta-barrel APT56_06100 IPR010105 TonB-dependent siderophore receptor APT56_06100 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily APT56_06105 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 APT56_06105 IPR007627 RNA polymerase sigma-70 region 2 APT56_06105 IPR014284 RNA polymerase sigma-70 like domain APT56_06105 IPR039425 RNA polymerase sigma-70 like APT56_06105 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_06105 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site APT56_06105 IPR013325 RNA polymerase sigma factor, region 2 APT56_06105 IPR013324 RNA polymerase sigma factor, region 3/4-like APT56_06110 IPR006860 FecR protein APT56_06110 IPR032623 FecR, N-terminal APT56_06110 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component APT56_06115 IPR010917 TonB-dependent receptor, conserved site APT56_06115 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily APT56_06115 IPR037066 TonB-dependent receptor, plug domain superfamily APT56_06115 IPR039423 TonB-dependent receptor-like APT56_06115 IPR011662 Secretin/TonB, short N-terminal domain APT56_06115 IPR012910 TonB-dependent receptor, plug domain APT56_06115 IPR000531 TonB-dependent receptor-like, beta-barrel APT56_06115 IPR010105 TonB-dependent siderophore receptor APT56_06130 IPR013324 RNA polymerase sigma factor, region 3/4-like APT56_06130 IPR039425 RNA polymerase sigma-70 like APT56_06130 IPR014284 RNA polymerase sigma-70 like domain APT56_06130 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site APT56_06130 IPR007627 RNA polymerase sigma-70 region 2 APT56_06130 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 APT56_06130 IPR013325 RNA polymerase sigma factor, region 2 APT56_06130 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_06140 IPR000531 TonB-dependent receptor-like, beta-barrel APT56_06140 IPR037066 TonB-dependent receptor, plug domain superfamily APT56_06140 IPR012910 TonB-dependent receptor, plug domain APT56_06140 IPR039426 Vitamin B12 transporter BtuB-like APT56_06150 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain APT56_06150 IPR005467 Histidine kinase domain APT56_06150 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APT56_06150 IPR013727 Two-component sensor kinase, N-terminal APT56_06150 IPR003594 Histidine kinase/HSP90-like ATPase APT56_06150 IPR003660 HAMP domain APT56_06150 IPR004358 Signal transduction histidine kinase-related protein, C-terminal APT56_06150 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily APT56_06155 IPR011006 CheY-like superfamily APT56_06155 IPR001867 OmpR/PhoB-type DNA-binding domain APT56_06155 IPR016032 Signal transduction response regulator, C-terminal effector APT56_06155 IPR001789 Signal transduction response regulator, receiver domain APT56_06155 IPR039420 Transcriptional regulatory protein WalR-like APT56_06155 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_06160 IPR011050 Pectin lyase fold/virulence factor APT56_06160 IPR005546 Autotransporter beta-domain APT56_06160 IPR023828 Peptidase S8, subtilisin, Ser-active site APT56_06160 IPR015500 Peptidase S8, subtilisin-related APT56_06160 IPR013425 Autotransporter-associated beta strand repeat APT56_06160 IPR006315 Outer membrane autotransporter barrel APT56_06160 IPR022398 Peptidase S8, subtilisin, His-active site APT56_06160 IPR036852 Peptidase S8/S53 domain superfamily APT56_06160 IPR034061 Autotransporter serine protease peptidase domain APT56_06160 IPR036709 Autotransporter beta-domain superfamily APT56_06160 IPR000209 Peptidase S8/S53 domain APT56_06165 IPR004680 Citrate transporter-like domain APT56_06165 IPR014738 Citrate transporter APT56_06170 IPR011283 Acetoacetyl-CoA reductase APT56_06170 IPR036291 NAD(P)-binding domain superfamily APT56_06170 IPR002347 Short-chain dehydrogenase/reductase SDR APT56_06170 IPR020904 Short-chain dehydrogenase/reductase, conserved site APT56_06175 IPR002347 Short-chain dehydrogenase/reductase SDR APT56_06175 IPR020904 Short-chain dehydrogenase/reductase, conserved site APT56_06175 IPR036291 NAD(P)-binding domain superfamily APT56_06190 IPR012340 Nucleic acid-binding, OB-fold APT56_06190 IPR019844 Cold-shock (CSD) domain APT56_06190 IPR011129 Cold shock domain APT56_06190 IPR012156 Cold shock, CspA APT56_06190 IPR002059 Cold-shock protein, DNA-binding APT56_06205 IPR010696 Protein of unknown function DUF1272 APT56_06210 IPR008526 Inner membrane protein YedI APT56_06215 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_06215 IPR005119 LysR, substrate-binding APT56_06215 IPR036390 Winged helix DNA-binding domain superfamily APT56_06215 IPR037420 HTH-type transcriptional activator AmpR, PBP2 APT56_06215 IPR000847 Transcription regulator HTH, LysR APT56_06220 IPR012338 Beta-lactamase/transpeptidase-like APT56_06220 IPR000871 Beta-lactamase, class-A APT56_06220 IPR023650 Beta-lactamase, class-A active site APT56_06220 IPR006311 Twin-arginine translocation pathway, signal sequence APT56_06225 IPR037066 TonB-dependent receptor, plug domain superfamily APT56_06225 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily APT56_06225 IPR010917 TonB-dependent receptor, conserved site APT56_06225 IPR010916 TonB box, conserved site APT56_06225 IPR011662 Secretin/TonB, short N-terminal domain APT56_06225 IPR012910 TonB-dependent receptor, plug domain APT56_06225 IPR010105 TonB-dependent siderophore receptor APT56_06225 IPR000531 TonB-dependent receptor-like, beta-barrel APT56_06230 IPR011008 Dimeric alpha-beta barrel APT56_06230 IPR000485 AsnC-type HTH domain APT56_06230 IPR036390 Winged helix DNA-binding domain superfamily APT56_06230 IPR011991 ArsR-like helix-turn-helix domain APT56_06230 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain APT56_06230 IPR019885 Transcription regulator HTH, AsnC-type, conserved site APT56_06230 IPR019888 Transcription regulator AsnC-type APT56_06230 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_06240 IPR035906 MetI-like superfamily APT56_06240 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_06245 IPR025966 Oligopeptide transport permease C-like, N-terminal domain APT56_06245 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_06245 IPR035906 MetI-like superfamily APT56_06250 IPR017871 ABC transporter, conserved site APT56_06250 IPR003439 ABC transporter-like APT56_06250 IPR003593 AAA+ ATPase domain APT56_06250 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_06250 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal APT56_06260 IPR023765 Solute-binding protein family 5, conserved site APT56_06260 IPR039424 Solute-binding protein family 5 APT56_06260 IPR030678 Peptide/nickel binding protein, MppA-type APT56_06260 IPR000914 Solute-binding protein family 5 domain APT56_06265 IPR023765 Solute-binding protein family 5, conserved site APT56_06265 IPR039424 Solute-binding protein family 5 APT56_06265 IPR030678 Peptide/nickel binding protein, MppA-type APT56_06265 IPR000914 Solute-binding protein family 5 domain APT56_06275 IPR010131 RND efflux system, outer membrane lipoprotein, NodT APT56_06275 IPR003423 Outer membrane efflux protein APT56_06280 IPR001036 Acriflavin resistance protein APT56_06280 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APT56_06285 IPR006143 RND efflux pump, membrane fusion protein APT56_06285 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APT56_06285 IPR022824 Multidrug resistance protein MdtA APT56_06295 IPR000060 BCCT transporter family APT56_06295 IPR018093 BCCT transporter, conserved site APT56_06300 IPR006143 RND efflux pump, membrane fusion protein APT56_06300 IPR022824 Multidrug resistance protein MdtA APT56_06300 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APT56_06305 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APT56_06305 IPR001036 Acriflavin resistance protein APT56_06310 IPR003423 Outer membrane efflux protein APT56_06310 IPR010131 RND efflux system, outer membrane lipoprotein, NodT APT56_06320 IPR010131 RND efflux system, outer membrane lipoprotein, NodT APT56_06320 IPR003423 Outer membrane efflux protein APT56_06325 IPR001036 Acriflavin resistance protein APT56_06325 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 APT56_06325 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APT56_06330 IPR006143 RND efflux pump, membrane fusion protein APT56_06330 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APT56_06335 IPR009057 Homeobox-like domain superfamily APT56_06335 IPR001647 DNA-binding HTH domain, TetR-type APT56_06335 IPR023772 DNA-binding HTH domain, TetR-type, conserved site APT56_06335 IPR013572 Transcription regulator MAATS, C-terminal APT56_06335 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily APT56_06340 IPR005119 LysR, substrate-binding APT56_06340 IPR000847 Transcription regulator HTH, LysR APT56_06340 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_06340 IPR036390 Winged helix DNA-binding domain superfamily APT56_06345 IPR030678 Peptide/nickel binding protein, MppA-type APT56_06345 IPR039424 Solute-binding protein family 5 APT56_06345 IPR000914 Solute-binding protein family 5 domain APT56_06345 IPR023765 Solute-binding protein family 5, conserved site APT56_06350 IPR000101 Gamma-glutamyltranspeptidase APT56_06350 IPR029055 Nucleophile aminohydrolases, N-terminal APT56_06355 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal APT56_06355 IPR022433 Lipid kinase YegS APT56_06355 IPR001206 Diacylglycerol kinase, catalytic domain APT56_06355 IPR005218 Diacylglycerol/lipid kinase APT56_06355 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily APT56_06360 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type APT56_06360 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA APT56_06360 IPR029052 Metallo-dependent phosphatase-like APT56_06365 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APT56_06365 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily APT56_06385 IPR002299 Porin, Neisseria sp. type APT56_06385 IPR033900 Porin domain, Gram-negative type APT56_06385 IPR023614 Porin domain superfamily APT56_06385 IPR001702 Porin, Gram-negative type APT56_06390 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily APT56_06390 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid APT56_06390 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 APT56_06395 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit APT56_06395 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit APT56_06400 IPR010218 NADH dehydrogenase, subunit C APT56_06400 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily APT56_06400 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit APT56_06400 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site APT56_06405 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H APT56_06405 IPR029014 [NiFe]-hydrogenase, large subunit APT56_06405 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily APT56_06405 IPR001135 NADH-quinone oxidoreductase, subunit D APT56_06405 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site APT56_06410 IPR002023 NADH-quinone oxidoreductase subunit E-like APT56_06410 IPR042128 NuoE domain APT56_06410 IPR041921 NADH-quinone oxidoreductase subunit E, N-terminal APT56_06410 IPR036249 Thioredoxin-like superfamily APT56_06415 IPR019554 Soluble ligand binding domain APT56_06415 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily APT56_06415 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain APT56_06415 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily APT56_06415 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain APT56_06415 IPR011537 NADH ubiquinone oxidoreductase, F subunit APT56_06415 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site APT56_06420 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain APT56_06420 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site APT56_06420 IPR010228 NADH:ubiquinone oxidoreductase, subunit G APT56_06420 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding APT56_06420 IPR015405 NADH-quinone oxidoreductase, chain G, C-terminal APT56_06420 IPR006656 Molybdopterin oxidoreductase APT56_06420 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain APT56_06420 IPR036010 2Fe-2S ferredoxin-like superfamily APT56_06425 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H APT56_06425 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site APT56_06430 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APT56_06430 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APT56_06430 IPR010226 NADH-quinone oxidoreductase, chain I APT56_06435 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 APT56_06435 IPR042106 NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ APT56_06440 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K APT56_06440 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like APT56_06445 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup APT56_06445 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit APT56_06445 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal APT56_06445 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 APT56_06450 IPR010227 NADH-quinone oxidoreductase, chain M/4 APT56_06450 IPR003918 NADH:ubiquinone oxidoreductase APT56_06450 IPR000260 NADH:ubiquinone oxidoreductase chain 4, N-terminal APT56_06450 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit APT56_06455 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 APT56_06455 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit APT56_06465 IPR030148 Catecholate siderophore receptor Fiu APT56_06465 IPR012910 TonB-dependent receptor, plug domain APT56_06465 IPR037066 TonB-dependent receptor, plug domain superfamily APT56_06465 IPR039423 TonB-dependent receptor-like APT56_06465 IPR000531 TonB-dependent receptor-like, beta-barrel APT56_06465 IPR010105 TonB-dependent siderophore receptor APT56_06465 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily APT56_06470 IPR036412 HAD-like superfamily APT56_06470 IPR023214 HAD superfamily APT56_06475 IPR041471 UvrB, interaction domain APT56_06475 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_06475 IPR037235 TRCF-like, C-terminal domain APT56_06475 IPR005118 Transcription-repair-coupling factor, C-terminal domain APT56_06475 IPR036101 CarD-like/TRCF domain superfamily APT56_06475 IPR004576 Transcription-repair coupling factor APT56_06475 IPR003711 CarD-like/TRCF domain APT56_06475 IPR011545 DEAD/DEAH box helicase domain APT56_06475 IPR001650 Helicase, C-terminal APT56_06475 IPR014001 Helicase superfamily 1/2, ATP-binding domain APT56_06480 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site APT56_06480 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase APT56_06480 IPR034683 Cytidylyltransferase IspD/TarI APT56_06480 IPR029044 Nucleotide-diphospho-sugar transferases APT56_06485 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site APT56_06485 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily APT56_06485 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase APT56_06495 IPR004674 Alkylhydroperoxidase AhpD APT56_06495 IPR004675 Alkylhydroperoxidase AhpD core APT56_06495 IPR003779 Carboxymuconolactone decarboxylase-like APT56_06495 IPR029032 AhpD-like APT56_06500 IPR036249 Thioredoxin-like superfamily APT56_06500 IPR024706 Peroxiredoxin, AhpC-type APT56_06500 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant APT56_06500 IPR013766 Thioredoxin domain APT56_06505 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain APT56_06505 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily APT56_06505 IPR005467 Histidine kinase domain APT56_06505 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APT56_06505 IPR004358 Signal transduction histidine kinase-related protein, C-terminal APT56_06505 IPR003594 Histidine kinase/HSP90-like ATPase APT56_06505 IPR003660 HAMP domain APT56_06510 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_06510 IPR016032 Signal transduction response regulator, C-terminal effector APT56_06510 IPR001867 OmpR/PhoB-type DNA-binding domain APT56_06510 IPR011006 CheY-like superfamily APT56_06510 IPR039420 Transcriptional regulatory protein WalR-like APT56_06510 IPR001789 Signal transduction response regulator, receiver domain APT56_06515 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB APT56_06515 IPR000905 Gcp-like domain APT56_06520 IPR036895 Uracil-DNA glycosylase-like domain superfamily APT56_06520 IPR005122 Uracil-DNA glycosylase-like APT56_06520 IPR005273 Uracil-DNA glycosylase family 4 APT56_06525 IPR011701 Major facilitator superfamily APT56_06525 IPR023727 Lysophospholipid transporter LplT APT56_06525 IPR036259 MFS transporter superfamily APT56_06530 IPR010935 SMCs flexible hinge APT56_06530 IPR024704 Structural maintenance of chromosomes protein APT56_06530 IPR003395 RecF/RecN/SMC, N-terminal APT56_06530 IPR036277 SMCs flexible hinge superfamily APT56_06530 IPR011890 Structural maintenance of chromosomes protein, prokaryotic APT56_06530 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_06540 IPR010994 RuvA domain 2-like APT56_06540 IPR001357 BRCT domain APT56_06540 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type APT56_06540 IPR004150 NAD-dependent DNA ligase, OB-fold APT56_06540 IPR012340 Nucleic acid-binding, OB-fold APT56_06540 IPR013840 NAD-dependent DNA ligase, N-terminal APT56_06540 IPR013839 NAD-dependent DNA ligase, adenylation APT56_06540 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 APT56_06540 IPR001679 NAD-dependent DNA ligase APT56_06540 IPR033136 NAD-dependent DNA ligase, conserved site APT56_06540 IPR018239 NAD-dependent DNA ligase, active site APT56_06540 IPR041663 DisA/LigA, helix-hairpin-helix motif APT56_06540 IPR036420 BRCT domain superfamily APT56_06545 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site APT56_06545 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type APT56_06555 IPR006008 Intracellular septation protein A APT56_06560 IPR002579 Peptide methionine sulphoxide reductase MrsB APT56_06560 IPR028427 Peptide methionine sulfoxide reductase APT56_06560 IPR011057 Mss4-like superfamily APT56_06565 IPR003439 ABC transporter-like APT56_06565 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_06565 IPR003593 AAA+ ATPase domain APT56_06565 IPR017871 ABC transporter, conserved site APT56_06570 IPR003339 ABC/ECF transporter, transmembrane component APT56_06575 IPR003784 BioY protein APT56_06590 IPR017871 ABC transporter, conserved site APT56_06590 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal APT56_06590 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_06590 IPR003593 AAA+ ATPase domain APT56_06590 IPR003439 ABC transporter-like APT56_06595 IPR003593 AAA+ ATPase domain APT56_06595 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein APT56_06595 IPR003439 ABC transporter-like APT56_06595 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_06595 IPR017871 ABC transporter, conserved site APT56_06605 IPR006311 Twin-arginine translocation pathway, signal sequence APT56_06605 IPR007312 Phosphoesterase APT56_06605 IPR017850 Alkaline-phosphatase-like, core domain superfamily APT56_06605 IPR017767 Bacterial phospholipase C, phosphocholine-specific APT56_06605 IPR008475 Bacterial phospholipase C, C-terminal domain APT56_06610 IPR036038 Aminotransferase-like, PLP-dependent enzymes APT56_06610 IPR001544 Aminotransferase class IV APT56_06610 IPR018300 Aminotransferase, class IV, conserved site APT56_06625 IPR001851 ABC transporter, permease APT56_06635 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_06635 IPR017871 ABC transporter, conserved site APT56_06635 IPR003439 ABC transporter-like APT56_06635 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein APT56_06635 IPR003593 AAA+ ATPase domain APT56_06640 IPR017871 ABC transporter, conserved site APT56_06640 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal APT56_06640 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_06640 IPR003593 AAA+ ATPase domain APT56_06640 IPR003439 ABC transporter-like APT56_06645 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal APT56_06645 IPR005759 Endonuclease III APT56_06645 IPR004035 Endonuclease III, iron-sulphur binding site APT56_06645 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif APT56_06645 IPR000445 Helix-hairpin-helix motif APT56_06645 IPR003265 HhH-GPD domain APT56_06645 IPR004036 Endonuclease III-like, conserved site-2 APT56_06645 IPR011257 DNA glycosylase APT56_06650 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB APT56_06650 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria APT56_06650 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APT56_06650 IPR007202 4Fe-4S domain APT56_06650 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APT56_06660 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain APT56_06660 IPR033892 Ferredoxin--NADP reductase, bacteria APT56_06660 IPR017938 Riboflavin synthase-like beta-barrel APT56_06660 IPR017927 FAD-binding domain, ferredoxin reductase-type APT56_06660 IPR001433 Oxidoreductase FAD/NAD(P)-binding APT56_06660 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain APT56_06665 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APT56_06665 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APT56_06665 IPR000813 7Fe ferredoxin APT56_06665 IPR022569 Ferredoxin, C-terminal APT56_06670 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain APT56_06670 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal APT56_06670 IPR007229 Nicotinate phosphoribosyltransferase family APT56_06670 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase APT56_06670 IPR006406 Nicotinate phosphoribosyltransferase APT56_06675 IPR035709 RutC family, YoaB-like APT56_06675 IPR006175 YjgF/YER057c/UK114 family APT56_06675 IPR035959 RutC-like superfamily APT56_06675 IPR019897 RidA, conserved site APT56_06685 IPR010384 MtfA family APT56_06685 IPR042252 MtfA, N-terminal APT56_06685 IPR024079 Metallopeptidase, catalytic domain superfamily APT56_06690 IPR003607 HD/PDEase domain APT56_06690 IPR004811 RelA/SpoT family APT56_06690 IPR012675 Beta-grasp domain superfamily APT56_06690 IPR004095 TGS APT56_06690 IPR012676 TGS-like APT56_06690 IPR033655 RelA, TGS domain APT56_06690 IPR007685 RelA/SpoT APT56_06690 IPR002912 ACT domain APT56_06695 IPR020846 Major facilitator superfamily domain APT56_06695 IPR011701 Major facilitator superfamily APT56_06695 IPR036259 MFS transporter superfamily APT56_06695 IPR004736 MFS transporter, metabolite:H symporter APT56_06695 IPR005829 Sugar transporter, conserved site APT56_06700 IPR011650 Peptidase M20, dimerisation domain APT56_06700 IPR036264 Bacterial exopeptidase dimerisation domain APT56_06700 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site APT56_06700 IPR002933 Peptidase M20 APT56_06700 IPR010169 Acetylornithine deacetylase ArgE APT56_06705 IPR006654 Tryptophan synthase, beta chain APT56_06705 IPR023026 Tryptophan synthase beta chain/beta chain-like APT56_06705 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme APT56_06705 IPR001926 Pyridoxal-phosphate dependent enzyme APT56_06705 IPR006653 Tryptophan synthase, beta chain, conserved site APT56_06710 IPR011060 Ribulose-phosphate binding barrel APT56_06710 IPR013785 Aldolase-type TIM barrel APT56_06710 IPR002028 Tryptophan synthase, alpha chain APT56_06710 IPR018204 Tryptophan synthase, alpha chain, active site APT56_06715 IPR029045 ClpP/crotonase-like domain superfamily APT56_06715 IPR041010 Acetyl-coA carboxylase zinc finger domain APT56_06715 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal APT56_06715 IPR034733 Acetyl-CoA carboxylase APT56_06715 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit APT56_06720 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel APT56_06720 IPR018550 Lipid A 3-O-deacylase-related APT56_06725 IPR022967 RNA-binding domain, S1 APT56_06725 IPR004659 Ribonuclease E/G APT56_06725 IPR021968 Polyribonucleotide phosphorylase C-terminal APT56_06725 IPR012340 Nucleic acid-binding, OB-fold APT56_06725 IPR003029 S1 domain APT56_06725 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G APT56_06725 IPR028878 Ribonuclease E APT56_06730 IPR002942 RNA-binding S4 domain APT56_06730 IPR036986 RNA-binding S4 domain superfamily APT56_06730 IPR020103 Pseudouridine synthase, catalytic domain superfamily APT56_06730 IPR006225 Pseudouridine synthase, RluC/RluD APT56_06730 IPR006145 Pseudouridine synthase, RsuA/RluA APT56_06730 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site APT56_06735 IPR041492 Haloacid dehalogenase-like hydrolase APT56_06735 IPR037512 Phosphoglycolate phosphatase, prokaryotic APT56_06735 IPR023214 HAD superfamily APT56_06735 IPR006549 HAD-superfamily hydrolase,subfamily IIIA APT56_06735 IPR006439 HAD hydrolase, subfamily IA APT56_06735 IPR036412 HAD-like superfamily APT56_06735 IPR023198 Phosphoglycolate phosphatase-like, domain 2 APT56_06735 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic APT56_06740 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily APT56_06740 IPR006311 Twin-arginine translocation pathway, signal sequence APT56_06740 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP APT56_06740 IPR000572 Oxidoreductase, molybdopterin-binding domain APT56_06745 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ APT56_06745 IPR013130 Ferric reductase transmembrane component-like domain APT56_06750 IPR036366 PGBD superfamily APT56_06750 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily APT56_06750 IPR002502 N-acetylmuramoyl-L-alanine amidase domain APT56_06750 IPR036365 PGBD-like superfamily APT56_06750 IPR002477 Peptidoglycan binding-like APT56_06755 IPR008189 rRNA small subunit methyltransferase I APT56_06755 IPR018063 SAM-dependent methyltransferase RsmI, conserved site APT56_06755 IPR035996 Tetrapyrrole methylase superfamily APT56_06755 IPR000878 Tetrapyrrole methylase APT56_06755 IPR014777 Tetrapyrrole methylase, subdomain 1 APT56_06755 IPR014776 Tetrapyrrole methylase, subdomain 2 APT56_06760 IPR029001 Inosine triphosphate pyrophosphatase-like APT56_06760 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein APT56_06765 IPR039255 Large ribosomal RNA subunit accumulation protein YceD, bacteria APT56_06765 IPR003772 Large ribosomal RNA subunit accumulation protein YceD APT56_06770 IPR011332 Zinc-binding ribosomal protein APT56_06770 IPR002677 Ribosomal protein L32p APT56_06775 IPR012281 Phospholipid biosynthesis protein, PlsX-like APT56_06775 IPR003664 Fatty acid synthesis PlsX protein APT56_06780 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 APT56_06780 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal APT56_06780 IPR016039 Thiolase-like APT56_06780 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III APT56_06785 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type APT56_06785 IPR024925 Malonyl CoA-acyl carrier protein transacylase APT56_06785 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase APT56_06785 IPR014043 Acyl transferase APT56_06785 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding APT56_06785 IPR001227 Acyl transferase domain superfamily APT56_06790 IPR036291 NAD(P)-binding domain superfamily APT56_06790 IPR002347 Short-chain dehydrogenase/reductase SDR APT56_06790 IPR020904 Short-chain dehydrogenase/reductase, conserved site APT56_06790 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase APT56_06795 IPR036736 ACP-like superfamily APT56_06795 IPR003231 Acyl carrier protein (ACP) APT56_06795 IPR009081 Phosphopantetheine binding ACP domain APT56_06795 IPR006162 Phosphopantetheine attachment site APT56_06800 IPR018201 Beta-ketoacyl synthase, active site APT56_06800 IPR014031 Beta-ketoacyl synthase, C-terminal APT56_06800 IPR016039 Thiolase-like APT56_06800 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain APT56_06800 IPR000794 Beta-ketoacyl synthase APT56_06800 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 APT56_06800 IPR014030 Beta-ketoacyl synthase, N-terminal APT56_06810 IPR014286 RNA polymerase sigma-70 RpoE type APT56_06810 IPR013325 RNA polymerase sigma factor, region 2 APT56_06810 IPR013324 RNA polymerase sigma factor, region 3/4-like APT56_06810 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_06810 IPR039425 RNA polymerase sigma-70 like APT56_06810 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site APT56_06810 IPR007627 RNA polymerase sigma-70 region 2 APT56_06810 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 APT56_06810 IPR014284 RNA polymerase sigma-70 like domain APT56_06825 IPR036034 PDZ superfamily APT56_06825 IPR011782 Peptidase S1C, Do APT56_06825 IPR009003 Peptidase S1, PA clan APT56_06825 IPR001478 PDZ domain APT56_06825 IPR001940 Peptidase S1C APT56_06830 IPR005225 Small GTP-binding protein domain APT56_06830 IPR035654 Elongation factor 4, domain IV APT56_06830 IPR013842 GTP-binding protein LepA, C-terminal APT56_06830 IPR038363 LepA, C-terminal domain superfamily APT56_06830 IPR031157 Tr-type G domain, conserved site APT56_06830 IPR009000 Translation protein, beta-barrel domain superfamily APT56_06830 IPR000795 Transcription factor, GTP-binding domain APT56_06830 IPR006297 Elongation factor 4 APT56_06830 IPR035647 EF-G domain III/V-like APT56_06830 IPR000640 Elongation factor EFG, domain V-like APT56_06830 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_06830 IPR004161 Translation elongation factor EFTu-like, domain 2 APT56_06835 IPR000223 Peptidase S26A, signal peptidase I APT56_06835 IPR019756 Peptidase S26A, signal peptidase I, serine active site APT56_06835 IPR019757 Peptidase S26A, signal peptidase I, lysine active site APT56_06835 IPR019533 Peptidase S26 APT56_06835 IPR019758 Peptidase S26A, signal peptidase I, conserved site APT56_06835 IPR036286 LexA/Signal peptidase-like superfamily APT56_06840 IPR014720 Double-stranded RNA-binding domain APT56_06840 IPR000999 Ribonuclease III domain APT56_06840 IPR011907 Ribonuclease III APT56_06840 IPR036389 Ribonuclease III, endonuclease domain superfamily APT56_06845 IPR030388 Era-type guanine nucleotide-binding (G) domain APT56_06845 IPR004044 K Homology domain, type 2 APT56_06845 IPR009019 K homology domain superfamily, prokaryotic type APT56_06845 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_06845 IPR005662 GTP-binding protein Era APT56_06845 IPR015946 K homology domain-like, alpha/beta APT56_06845 IPR006073 GTP binding domain APT56_06845 IPR005225 Small GTP-binding protein domain APT56_06850 IPR012340 Nucleic acid-binding, OB-fold APT56_06850 IPR037278 ARFGAP/RecO-like zinc finger APT56_06850 IPR022572 DNA replication/recombination mediator RecO, N-terminal APT56_06850 IPR003717 Recombination protein O, RecO APT56_06860 IPR001926 Pyridoxal-phosphate dependent enzyme APT56_06860 IPR004450 Threonine synthase-like APT56_06860 IPR026260 Threonine synthase, bacterial/archaeal APT56_06860 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site APT56_06860 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme APT56_06870 IPR005064 Bordetella uptake gene APT56_06870 IPR042100 Bordetella uptake gene, domain 1 APT56_06880 IPR020471 Aldo/keto reductase APT56_06880 IPR023210 NADP-dependent oxidoreductase domain APT56_06880 IPR018170 Aldo/keto reductase, conserved site APT56_06880 IPR036812 NADP-dependent oxidoreductase domain superfamily APT56_06885 IPR006214 Bax inhibitor 1-related APT56_06900 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal APT56_06900 IPR023042 Peptidase M17, leucine aminopeptidase APT56_06900 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B APT56_06900 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal APT56_06910 IPR000847 Transcription regulator HTH, LysR APT56_06910 IPR036390 Winged helix DNA-binding domain superfamily APT56_06910 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_06920 IPR016160 Aldehyde dehydrogenase, cysteine active site APT56_06920 IPR016161 Aldehyde/histidinol dehydrogenase APT56_06920 IPR010061 Methylmalonate-semialdehyde dehydrogenase APT56_06920 IPR015590 Aldehyde dehydrogenase domain APT56_06920 IPR016162 Aldehyde dehydrogenase, N-terminal APT56_06920 IPR016163 Aldehyde dehydrogenase, C-terminal APT56_06925 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_06925 IPR000847 Transcription regulator HTH, LysR APT56_06925 IPR036390 Winged helix DNA-binding domain superfamily APT56_06925 IPR005119 LysR, substrate-binding APT56_06925 IPR037423 HTH-type transcriptional regulator CysB, PBP2 domain APT56_06935 IPR000064 Endopeptidase, NLPC/P60 domain APT56_06935 IPR038765 Papain-like cysteine peptidase superfamily APT56_06940 IPR012694 Propionate--CoA ligase APT56_06940 IPR020845 AMP-binding, conserved site APT56_06940 IPR025110 AMP-binding enzyme, C-terminal domain APT56_06940 IPR000873 AMP-dependent synthetase/ligase APT56_06940 IPR042099 AMP-dependent synthetase-like superfamily APT56_06940 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain APT56_06945 IPR005624 Haem-degrading APT56_06945 IPR038084 GlcG-like domain superfamily APT56_06960 IPR000620 EamA domain APT56_06965 IPR023603 Threonine aldolase APT56_06965 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APT56_06965 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase APT56_06965 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APT56_06965 IPR015424 Pyridoxal phosphate-dependent transferase APT56_06985 IPR040156 Electron transfer flavoprotein-ubiquinone oxidoreductase APT56_06985 IPR036188 FAD/NAD(P)-binding domain superfamily APT56_06985 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APT56_06995 IPR037171 NagB/RpiA transferase-like APT56_06995 IPR004165 Coenzyme A transferase family I APT56_06995 IPR004163 Coenzyme A transferase binding site APT56_06995 IPR012792 3-oxoacid CoA-transferase, subunit A APT56_07005 IPR000182 GNAT domain APT56_07005 IPR016181 Acyl-CoA N-acyltransferase APT56_07015 IPR000246 Peptidase T2, asparaginase 2 APT56_07015 IPR029055 Nucleophile aminohydrolases, N-terminal APT56_07020 IPR003439 ABC transporter-like APT56_07020 IPR017871 ABC transporter, conserved site APT56_07020 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_07020 IPR003593 AAA+ ATPase domain APT56_07020 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal APT56_07025 IPR030678 Peptide/nickel binding protein, MppA-type APT56_07025 IPR000914 Solute-binding protein family 5 domain APT56_07025 IPR039424 Solute-binding protein family 5 APT56_07030 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_07030 IPR035906 MetI-like superfamily APT56_07035 IPR035906 MetI-like superfamily APT56_07035 IPR025966 Oligopeptide transport permease C-like, N-terminal domain APT56_07035 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_07040 IPR005321 Peptidase S58, DmpA APT56_07040 IPR016117 ArgJ-like domain superfamily APT56_07050 IPR036005 Creatinase/aminopeptidase-like APT56_07050 IPR000994 Peptidase M24 APT56_07050 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site APT56_07050 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal APT56_07050 IPR000587 Creatinase, N-terminal APT56_07060 IPR029062 Class I glutamine amidotransferase-like APT56_07060 IPR004468 CTP synthase APT56_07060 IPR017926 Glutamine amidotransferase APT56_07060 IPR033828 CTP synthase GATase domain APT56_07060 IPR017456 CTP synthase, N-terminal APT56_07060 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_07070 IPR020811 Enolase, N-terminal APT56_07070 IPR020810 Enolase, C-terminal TIM barrel domain APT56_07070 IPR029017 Enolase-like, N-terminal APT56_07070 IPR000941 Enolase APT56_07070 IPR036849 Enolase-like, C-terminal domain superfamily APT56_07070 IPR020809 Enolase, conserved site APT56_07075 IPR007060 Septum formation initiator FtsL/DivIC APT56_07075 IPR023081 Cell division protein FtsB APT56_07085 IPR016154 Heat shock protein Hsp33, C-terminal APT56_07085 IPR016153 Heat shock protein Hsp33, N-terminal APT56_07085 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily APT56_07085 IPR000397 Heat shock protein Hsp33 APT56_07095 IPR020845 AMP-binding, conserved site APT56_07095 IPR025110 AMP-binding enzyme, C-terminal domain APT56_07095 IPR000873 AMP-dependent synthetase/ligase APT56_07095 IPR042099 AMP-dependent synthetase-like superfamily APT56_07125 IPR002052 DNA methylase, N-6 adenine-specific, conserved site APT56_07125 IPR000241 Putative RNA methylase domain APT56_07125 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT56_07125 IPR004114 THUMP domain APT56_07135 IPR042188 MmgE/PrpD superfamily, domain 2 APT56_07135 IPR036148 MmgE/PrpD superfamily APT56_07135 IPR012705 2-methylcitrate dehydratase PrpD APT56_07135 IPR042183 MmgE/PrpD superfamily, domain 1 APT56_07135 IPR005656 MmgE/PrpD APT56_07140 IPR016142 Citrate synthase-like, large alpha subdomain APT56_07140 IPR016143 Citrate synthase-like, small alpha subdomain APT56_07140 IPR019810 Citrate synthase active site APT56_07140 IPR024176 Citrate synthase, bacterial-type APT56_07140 IPR002020 Citrate synthase APT56_07140 IPR036969 Citrate synthase superfamily APT56_07140 IPR011278 2-methylcitrate synthase/citrate synthase type I APT56_07145 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily APT56_07145 IPR040442 Pyruvate kinase-like domain superfamily APT56_07145 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site APT56_07145 IPR039556 ICL/PEPM domain APT56_07145 IPR012695 2-methylisocitrate lyase APT56_07150 IPR022383 Lactate/malate dehydrogenase, C-terminal APT56_07150 IPR001236 Lactate/malate dehydrogenase, N-terminal APT56_07150 IPR001557 L-lactate/malate dehydrogenase APT56_07150 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal APT56_07150 IPR010945 Malate dehydrogenase, type 2 APT56_07150 IPR036291 NAD(P)-binding domain superfamily APT56_07155 IPR036390 Winged helix DNA-binding domain superfamily APT56_07155 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_07155 IPR011663 UbiC transcription regulator-associated APT56_07155 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily APT56_07155 IPR000524 Transcription regulator HTH, GntR APT56_07160 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit APT56_07160 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit APT56_07160 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site APT56_07160 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit APT56_07165 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit APT56_07165 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit APT56_07165 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor APT56_07170 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site APT56_07170 IPR036188 FAD/NAD(P)-binding domain superfamily APT56_07170 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain APT56_07170 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal APT56_07170 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily APT56_07170 IPR011281 Succinate dehydrogenase, flavoprotein subunit APT56_07170 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit APT56_07170 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily APT56_07175 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal APT56_07175 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein APT56_07175 IPR009051 Alpha-helical ferredoxin APT56_07175 IPR012675 Beta-grasp domain superfamily APT56_07175 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APT56_07175 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APT56_07175 IPR036010 2Fe-2S ferredoxin-like superfamily APT56_07175 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain APT56_07180 IPR005631 Flavinator of succinate dehydrogenase APT56_07180 IPR036714 Flavinator of succinate dehydrogenase superfamily APT56_07185 IPR002020 Citrate synthase APT56_07185 IPR016142 Citrate synthase-like, large alpha subdomain APT56_07185 IPR016143 Citrate synthase-like, small alpha subdomain APT56_07185 IPR019810 Citrate synthase active site APT56_07185 IPR024176 Citrate synthase, bacterial-type APT56_07185 IPR036969 Citrate synthase superfamily APT56_07185 IPR010953 Citrate synthase, type I APT56_07200 IPR037062 Malic enzyme, N-terminal domain superfamily APT56_07200 IPR042113 Phosphate acetyltransferase, domain 1 APT56_07200 IPR042112 Phosphate acetyltransferase, domain 2 APT56_07200 IPR002505 Phosphate acetyl/butaryl transferase APT56_07200 IPR012301 Malic enzyme, N-terminal domain APT56_07200 IPR015884 Malic enzyme, conserved site APT56_07200 IPR036291 NAD(P)-binding domain superfamily APT56_07200 IPR012188 NAD(P)-dependent malic enzyme APT56_07200 IPR012302 Malic enzyme, NAD-binding APT56_07205 IPR004660 Pyruvate dehydrogenase E1 component APT56_07205 IPR029061 Thiamin diphosphate-binding fold APT56_07205 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal APT56_07205 IPR041621 Pyruvate dehydrogenase E1 component, middle domain APT56_07205 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II APT56_07205 IPR005474 Transketolase, N-terminal APT56_07210 IPR004814 Oligopeptide transporter OPT APT56_07210 IPR004813 Oligopeptide transporter, OPT superfamily APT56_07215 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria APT56_07215 IPR011650 Peptidase M20, dimerisation domain APT56_07215 IPR002933 Peptidase M20 APT56_07215 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site APT56_07215 IPR036264 Bacterial exopeptidase dimerisation domain APT56_07220 IPR011650 Peptidase M20, dimerisation domain APT56_07220 IPR002933 Peptidase M20 APT56_07220 IPR036264 Bacterial exopeptidase dimerisation domain APT56_07220 IPR010158 Amidase, carbamoylase-type APT56_07230 IPR001926 Pyridoxal-phosphate dependent enzyme APT56_07230 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme APT56_07230 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase APT56_07230 IPR020601 1-aminocyclopropane-1-carboxylate deaminase, bacterial APT56_07230 IPR005965 1-aminocyclopropane-1-carboxylate deaminase APT56_07235 IPR036390 Winged helix DNA-binding domain superfamily APT56_07235 IPR000485 AsnC-type HTH domain APT56_07235 IPR011008 Dimeric alpha-beta barrel APT56_07235 IPR019888 Transcription regulator AsnC-type APT56_07235 IPR019885 Transcription regulator HTH, AsnC-type, conserved site APT56_07235 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_07235 IPR011991 ArsR-like helix-turn-helix domain APT56_07235 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain APT56_07240 IPR005475 Transketolase-like, pyrimidine-binding domain APT56_07240 IPR029061 Thiamin diphosphate-binding fold APT56_07240 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily APT56_07240 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal APT56_07240 IPR001017 Dehydrogenase, E1 component APT56_07240 IPR011603 2-oxoglutarate dehydrogenase E1 component APT56_07240 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain APT56_07245 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain APT56_07245 IPR000089 Biotin/lipoyl attachment APT56_07245 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily APT56_07245 IPR036625 E3-binding domain superfamily APT56_07245 IPR004167 Peripheral subunit-binding domain APT56_07245 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site APT56_07245 IPR006255 Dihydrolipoamide succinyltransferase APT56_07245 IPR011053 Single hybrid motif APT56_07250 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I APT56_07250 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain APT56_07250 IPR006258 Dihydrolipoamide dehydrogenase APT56_07250 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily APT56_07250 IPR023753 FAD/NAD(P)-binding domain APT56_07250 IPR036188 FAD/NAD(P)-binding domain superfamily APT56_07250 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site APT56_07255 IPR005654 ATPase, AFG1-like APT56_07255 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_07255 IPR030870 Cell division protein ZapE APT56_07260 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_07260 IPR013325 RNA polymerase sigma factor, region 2 APT56_07260 IPR014284 RNA polymerase sigma-70 like domain APT56_07260 IPR013324 RNA polymerase sigma factor, region 3/4-like APT56_07260 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 APT56_07260 IPR039425 RNA polymerase sigma-70 like APT56_07260 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site APT56_07260 IPR007627 RNA polymerase sigma-70 region 2 APT56_07265 IPR006860 FecR protein APT56_07265 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component APT56_07265 IPR032623 FecR, N-terminal APT56_07270 IPR012910 TonB-dependent receptor, plug domain APT56_07270 IPR000531 TonB-dependent receptor-like, beta-barrel APT56_07270 IPR010105 TonB-dependent siderophore receptor APT56_07270 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily APT56_07270 IPR010916 TonB box, conserved site APT56_07270 IPR039423 TonB-dependent receptor-like APT56_07270 IPR037066 TonB-dependent receptor, plug domain superfamily APT56_07295 IPR002306 Tryptophan-tRNA ligase APT56_07295 IPR024109 Tryptophan-tRNA ligase, bacterial-type APT56_07295 IPR002305 Aminoacyl-tRNA synthetase, class Ic APT56_07295 IPR036913 YegP-like superfamily APT56_07295 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT56_07305 IPR018974 Tex-like protein, N-terminal APT56_07305 IPR003029 S1 domain APT56_07305 IPR006641 YqgF/RNase H-like domain APT56_07305 IPR023319 Tex-like protein, HTH domain superfamily APT56_07305 IPR037027 YqgF/RNase H-like domain superfamily APT56_07305 IPR023323 Tex-like domain superfamily APT56_07305 IPR032639 Tex protein, YqgF-like domain APT56_07305 IPR022967 RNA-binding domain, S1 APT56_07305 IPR012337 Ribonuclease H-like superfamily APT56_07305 IPR012340 Nucleic acid-binding, OB-fold APT56_07305 IPR041692 HHH domain 9 APT56_07305 IPR010994 RuvA domain 2-like APT56_07310 IPR006555 ATP-dependent helicase, C-terminal APT56_07310 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type APT56_07310 IPR006935 Helicase/UvrB, N-terminal APT56_07310 IPR014001 Helicase superfamily 1/2, ATP-binding domain APT56_07310 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_07315 IPR011990 Tetratricopeptide-like helical domain superfamily APT56_07315 IPR017689 Outer membrane protein assembly factor BamD APT56_07315 IPR039565 Outer membrane lipoprotein BamD-like APT56_07320 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site APT56_07320 IPR006225 Pseudouridine synthase, RluC/RluD APT56_07320 IPR020103 Pseudouridine synthase, catalytic domain superfamily APT56_07320 IPR002942 RNA-binding S4 domain APT56_07320 IPR006145 Pseudouridine synthase, RsuA/RluA APT56_07320 IPR036986 RNA-binding S4 domain superfamily APT56_07330 IPR029058 Alpha/Beta hydrolase fold APT56_07330 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain APT56_07330 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I APT56_07335 IPR011283 Acetoacetyl-CoA reductase APT56_07335 IPR036291 NAD(P)-binding domain superfamily APT56_07335 IPR020904 Short-chain dehydrogenase/reductase, conserved site APT56_07335 IPR002347 Short-chain dehydrogenase/reductase SDR APT56_07340 IPR012909 PHA accumulation regulator DNA-binding, N-terminal APT56_07340 IPR010134 Polyhydroxyalkanoate synthesis repressor PhaR APT56_07340 IPR007897 PHB accumulation regulatory APT56_07345 IPR018470 Periplasmic metal-binding protein Tp34-type APT56_07345 IPR038482 Periplasmic metal-binding protein tp34-type superfamily APT56_07365 IPR027282 Two partner secretion pathway transporter APT56_07365 IPR035251 ShlB, POTRA domain APT56_07365 IPR013686 Polypeptide-transport-associated, ShlB-type APT56_07365 IPR005565 Haemolysin activator HlyB, C-terminal APT56_07365 IPR034746 POTRA domain APT56_07370 IPR008638 Filamentous haemagglutinin, N-terminal APT56_07370 IPR006914 VENN motif-containing domain APT56_07370 IPR011050 Pectin lyase fold/virulence factor APT56_07370 IPR012334 Pectin lyase fold APT56_07370 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APT56_07370 IPR028948 Bacterial toxin 28 APT56_07370 IPR025157 Hemagglutinin repeat APT56_07370 IPR006626 Parallel beta-helix repeat APT56_07385 IPR003719 Phenazine biosynthesis PhzF protein APT56_07390 IPR007055 BON domain APT56_07390 IPR014004 Transport-associated and nodulation domain, bacteria APT56_07395 IPR036629 YjbJ superfamily APT56_07395 IPR026042 Stress response protein YjbJ APT56_07395 IPR008462 CsbD-like domain APT56_07400 IPR004101 Mur ligase, C-terminal APT56_07400 IPR011761 ATP-grasp fold APT56_07400 IPR036615 Mur ligase, C-terminal domain superfamily APT56_07400 IPR011810 Cyanophycin synthetase APT56_07400 IPR013221 Mur ligase, central APT56_07400 IPR013651 ATP-grasp fold, RimK-type APT56_07400 IPR036565 Mur-like, catalytic domain superfamily APT56_07405 IPR011761 ATP-grasp fold APT56_07405 IPR004101 Mur ligase, C-terminal APT56_07405 IPR036615 Mur ligase, C-terminal domain superfamily APT56_07405 IPR013221 Mur ligase, central APT56_07405 IPR036565 Mur-like, catalytic domain superfamily APT56_07405 IPR011810 Cyanophycin synthetase APT56_07405 IPR013651 ATP-grasp fold, RimK-type APT56_07410 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_07410 IPR011917 ABC transporter, lipid A export, MsbA APT56_07410 IPR003439 ABC transporter-like APT56_07410 IPR017871 ABC transporter, conserved site APT56_07410 IPR036640 ABC transporter type 1, transmembrane domain superfamily APT56_07410 IPR039421 Type I protein exporter APT56_07410 IPR003593 AAA+ ATPase domain APT56_07410 IPR011527 ABC transporter type 1, transmembrane domain APT56_07425 IPR009078 Ferritin-like superfamily APT56_07425 IPR011197 Uncharacterised conserved protein UCP012318 APT56_07425 IPR007402 Protein of unknown function DUF455 APT56_07430 IPR005302 Molybdenum cofactor sulfurase, C-terminal APT56_07430 IPR011037 Pyruvate kinase-like, insert domain superfamily APT56_07430 IPR005163 3-alpha domain APT56_07435 IPR023346 Lysozyme-like domain superfamily APT56_07435 IPR031304 Transglycosylase SLT domain 2 APT56_07435 IPR011757 Lytic transglycosylase MltB APT56_07450 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal APT56_07450 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily APT56_07450 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal APT56_07450 IPR006089 Acyl-CoA dehydrogenase, conserved site APT56_07450 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain APT56_07450 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily APT56_07450 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal APT56_07460 IPR010072 D-alanine--D-alanyl carrier protein ligase APT56_07460 IPR010071 Amino acid adenylation domain APT56_07460 IPR025110 AMP-binding enzyme, C-terminal domain APT56_07460 IPR020845 AMP-binding, conserved site APT56_07460 IPR000873 AMP-dependent synthetase/ligase APT56_07460 IPR042099 AMP-dependent synthetase-like superfamily APT56_07470 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB APT56_07470 IPR028362 Alginate O-acetyltransferase AlgI APT56_07470 IPR004299 Membrane bound O-acyl transferase, MBOAT APT56_07480 IPR031811 AlgX/AlgJ, SGNH hydrolase-like domain APT56_07480 IPR034657 Alginate O-acetyltranferase AlgJ APT56_07490 IPR029044 Nucleotide-diphospho-sugar transferases APT56_07490 IPR001173 Glycosyltransferase 2-like APT56_07490 IPR037257 General secretory system II, protein E, N-terminal superfamily APT56_07490 IPR007831 General secretory system II, protein E, N-terminal APT56_07500 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain APT56_07500 IPR032892 UDP-N-acetylglucosamine 2-epimerase WecB APT56_07500 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like APT56_07505 IPR036837 Cation efflux protein, cytoplasmic domain superfamily APT56_07505 IPR027469 Cation efflux transmembrane domain superfamily APT56_07505 IPR002524 Cation efflux protein APT56_07515 IPR023495 Sugar efflux transporter, putative APT56_07515 IPR036259 MFS transporter superfamily APT56_07515 IPR020846 Major facilitator superfamily domain APT56_07515 IPR011701 Major facilitator superfamily APT56_07520 IPR006439 HAD hydrolase, subfamily IA APT56_07520 IPR041492 Haloacid dehalogenase-like hydrolase APT56_07520 IPR036412 HAD-like superfamily APT56_07520 IPR037512 Phosphoglycolate phosphatase, prokaryotic APT56_07520 IPR023198 Phosphoglycolate phosphatase-like, domain 2 APT56_07520 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic APT56_07520 IPR023214 HAD superfamily APT56_07525 IPR010233 Ubiquinone biosynthesis O-methyltransferase APT56_07525 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT56_07530 IPR006690 Outer membrane protein, OmpA-like, conserved site APT56_07530 IPR006664 Outer membrane protein, bacterial APT56_07530 IPR006665 OmpA-like domain APT56_07530 IPR036737 OmpA-like domain superfamily APT56_07535 IPR013760 DNA topoisomerase, type IIA-like domain superfamily APT56_07535 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal APT56_07535 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta APT56_07535 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily APT56_07535 IPR005743 DNA gyrase, subunit A APT56_07535 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat APT56_07535 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal APT56_07540 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APT56_07540 IPR022278 Phosphoserine aminotransferase APT56_07540 IPR015424 Pyridoxal phosphate-dependent transferase APT56_07540 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APT56_07540 IPR000192 Aminotransferase class V domain APT56_07545 IPR002912 ACT domain APT56_07545 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase APT56_07545 IPR036263 Chorismate mutase type II superfamily APT56_07545 IPR036979 Chorismate mutase domain superfamily APT56_07545 IPR002701 Chorismate mutase II, prokaryotic-type APT56_07545 IPR018528 Prephenate dehydratase, conserved site APT56_07545 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain APT56_07545 IPR001086 Prephenate dehydratase APT56_07560 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta APT56_07560 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site APT56_07560 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase APT56_07560 IPR036968 Enolpyruvate transferase domain superfamily APT56_07560 IPR001986 Enolpyruvate transferase domain APT56_07565 IPR003136 Cytidylate kinase APT56_07565 IPR011994 Cytidylate kinase domain APT56_07565 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_07570 IPR012340 Nucleic acid-binding, OB-fold APT56_07570 IPR003029 S1 domain APT56_07570 IPR022967 RNA-binding domain, S1 APT56_07570 IPR000110 Ribosomal protein S1 APT56_07575 IPR005685 Integration host factor, beta subunit APT56_07575 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily APT56_07575 IPR000119 Histone-like DNA-binding protein APT56_07585 IPR041166 LapB, rubredoxin metal binding domain APT56_07585 IPR019734 Tetratricopeptide repeat APT56_07585 IPR030865 Lipopolysaccharide assembly protein B APT56_07585 IPR013026 Tetratricopeptide repeat-containing domain APT56_07585 IPR011990 Tetratricopeptide-like helical domain superfamily APT56_07590 IPR011913 RfaE bifunctional protein, domain I APT56_07590 IPR011611 Carbohydrate kinase PfkB APT56_07590 IPR029056 Ribokinase-like APT56_07590 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site APT56_07595 IPR036291 NAD(P)-binding domain superfamily APT56_07595 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase APT56_07595 IPR001509 NAD-dependent epimerase/dehydratase APT56_07605 IPR001926 Pyridoxal-phosphate dependent enzyme APT56_07605 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site APT56_07605 IPR005858 Cysteine synthase CysM APT56_07605 IPR005856 Cysteine synthase APT56_07605 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme APT56_07610 IPR042100 Bordetella uptake gene, domain 1 APT56_07610 IPR005064 Bordetella uptake gene APT56_07625 IPR011757 Lytic transglycosylase MltB APT56_07625 IPR023346 Lysozyme-like domain superfamily APT56_07625 IPR031304 Transglycosylase SLT domain 2 APT56_07630 IPR023696 Ureohydrolase domain superfamily APT56_07630 IPR037138 Histone deacetylase domain superfamily APT56_07630 IPR023801 Histone deacetylase domain APT56_07630 IPR000286 Histone deacetylase family APT56_07635 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal APT56_07635 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal APT56_07635 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT56_07635 IPR012255 Electron transfer flavoprotein, beta subunit APT56_07635 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site APT56_07640 IPR033947 Electron transfer flavoprotein, alpha subunit, N-terminal APT56_07640 IPR001308 Electron transfer flavoprotein alpha subunit/FixB APT56_07640 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal APT56_07640 IPR029035 DHS-like NAD/FAD-binding domain superfamily APT56_07640 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site APT56_07640 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT56_07640 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal APT56_07645 IPR006512 YidE/YbjL duplication APT56_07645 IPR006037 Regulator of K+ conductance, C-terminal APT56_07645 IPR022457 Aspartate-alanine antiporter APT56_07645 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily APT56_07650 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APT56_07650 IPR015424 Pyridoxal phosphate-dependent transferase APT56_07650 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site APT56_07650 IPR022518 Aspartate 4-decarboxylase APT56_07650 IPR004839 Aminotransferase, class I/classII APT56_07650 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APT56_07655 IPR006512 YidE/YbjL duplication APT56_07655 IPR022457 Aspartate-alanine antiporter APT56_07655 IPR006037 Regulator of K+ conductance, C-terminal APT56_07655 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily APT56_07660 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal APT56_07660 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily APT56_07660 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain APT56_07660 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily APT56_07660 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain APT56_07660 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal APT56_07660 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal APT56_07665 IPR019479 Peroxiredoxin, C-terminal APT56_07665 IPR022915 Peroxiredoxin, TDXH subfamily APT56_07665 IPR013766 Thioredoxin domain APT56_07665 IPR024706 Peroxiredoxin, AhpC-type APT56_07665 IPR036249 Thioredoxin-like superfamily APT56_07665 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant APT56_07670 IPR000957 Sulphate/thiosulphate-binding, conserved site APT56_07670 IPR034408 Sulphate/thiosulphate-binding site APT56_07670 IPR005669 Thiosulphate/Sulfate-binding protein APT56_07675 IPR005667 Sulphate ABC transporter permease protein 2 APT56_07675 IPR011865 Sulphate ABC transporter, permease protein CysT APT56_07675 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_07675 IPR035906 MetI-like superfamily APT56_07680 IPR005667 Sulphate ABC transporter permease protein 2 APT56_07680 IPR011866 Sulphate ABC transporter, permease protein CysW APT56_07680 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_07680 IPR035906 MetI-like superfamily APT56_07685 IPR024765 TOBE-like domain APT56_07685 IPR005666 Sulphate transport system permease protein 1 APT56_07685 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_07685 IPR008995 Molybdate/tungstate binding, C-terminal APT56_07685 IPR041193 CysA, C-terminal regulatory domain APT56_07685 IPR003593 AAA+ ATPase domain APT56_07685 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal APT56_07685 IPR003439 ABC transporter-like APT56_07685 IPR017871 ABC transporter, conserved site APT56_07690 IPR002500 Phosphoadenosine phosphosulphate reductase APT56_07690 IPR011798 Adenosine 5'-phosphosulphate reductase APT56_07690 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT56_07690 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase APT56_07695 IPR011784 Sulphate adenylyltransferase, small subunit APT56_07695 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT56_07695 IPR002500 Phosphoadenosine phosphosulphate reductase APT56_07700 IPR002891 Adenylyl-sulfate kinase APT56_07700 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain APT56_07700 IPR000795 Transcription factor, GTP-binding domain APT56_07700 IPR031157 Tr-type G domain, conserved site APT56_07700 IPR009000 Translation protein, beta-barrel domain superfamily APT56_07700 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_07700 IPR005225 Small GTP-binding protein domain APT56_07700 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal APT56_07700 IPR011779 Sulphate adenylyltransferase, large subunit APT56_07705 IPR007197 Radical SAM APT56_07705 IPR013785 Aldolase-type TIM barrel APT56_07705 IPR006638 Elp3/MiaB/NifB APT56_07705 IPR040086 Protein MJ0683-like APT56_07720 IPR001857 Ribosomal protein L19 APT56_07720 IPR008991 Translation protein SH3-like domain superfamily APT56_07720 IPR018257 Ribosomal protein L19, conserved site APT56_07720 IPR038657 Ribosomal protein L19 superfamily APT56_07725 IPR023735 Uncharacterised nudix hydrolase NudL APT56_07725 IPR000059 NUDIX hydrolase, NudL, conserved site APT56_07725 IPR000086 NUDIX hydrolase domain APT56_07725 IPR015797 NUDIX hydrolase-like domain superfamily APT56_07730 IPR031944 Ribosome biogenesis GTPase RsgA, N-terminal APT56_07730 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain APT56_07730 IPR012340 Nucleic acid-binding, OB-fold APT56_07730 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_07730 IPR004881 Ribosome biogenesis GTPase RsgA APT56_07730 IPR010914 RsgA GTPase domain APT56_07735 IPR022919 Peptidase M48, protease HtpX, putative APT56_07735 IPR001915 Peptidase M48 APT56_07740 IPR036397 Ribonuclease H superfamily APT56_07740 IPR012337 Ribonuclease H-like superfamily APT56_07740 IPR022894 Oligoribonuclease APT56_07740 IPR013520 Exonuclease, RNase T/DNA polymerase III APT56_07745 IPR036652 YjeF N-terminal domain superfamily APT56_07745 IPR004443 YjeF N-terminal domain APT56_07750 IPR013225 PaaX-like, C-terminal APT56_07750 IPR011965 Phenylacetic acid degradation operon negative regulatory protein PaaX APT56_07750 IPR012906 PaaX-like, N-terminal APT56_07750 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_07755 IPR011881 1,2-phenylacetyl-CoA epoxidase, subunit A APT56_07755 IPR012347 Ferritin-like APT56_07755 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C APT56_07755 IPR009078 Ferritin-like superfamily APT56_07760 IPR038693 Phenylacetyl-CoA epoxidase, subunit B APT56_07760 IPR009359 Phenylacetic acid degradation B APT56_07765 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C APT56_07765 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C APT56_07765 IPR009078 Ferritin-like superfamily APT56_07765 IPR012347 Ferritin-like APT56_07770 IPR034904 Fe-S cluster assembly domain superfamily APT56_07770 IPR002744 MIP18 family-like APT56_07770 IPR011883 Phenylacetate-CoA oxygenase, PaaJ subunit APT56_07775 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain APT56_07775 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase APT56_07775 IPR036010 2Fe-2S ferredoxin-like superfamily APT56_07775 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain APT56_07775 IPR017927 FAD-binding domain, ferredoxin reductase-type APT56_07775 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain APT56_07775 IPR012675 Beta-grasp domain superfamily APT56_07775 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site APT56_07775 IPR017938 Riboflavin synthase-like beta-barrel APT56_07775 IPR001433 Oxidoreductase FAD/NAD(P)-binding APT56_07775 IPR011884 Phenylacetate-CoA oxygenase/reductase, PaaK subunit APT56_07780 IPR016161 Aldehyde/histidinol dehydrogenase APT56_07780 IPR016163 Aldehyde dehydrogenase, C-terminal APT56_07780 IPR016162 Aldehyde dehydrogenase, N-terminal APT56_07780 IPR015590 Aldehyde dehydrogenase domain APT56_07780 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent APT56_07780 IPR029510 Aldehyde dehydrogenase, glutamic acid active site APT56_07780 IPR016160 Aldehyde dehydrogenase, cysteine active site APT56_07785 IPR001753 Enoyl-CoA hydratase/isomerase APT56_07785 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB APT56_07785 IPR014748 Enoyl-CoA hydratase, C-terminal APT56_07785 IPR029045 ClpP/crotonase-like domain superfamily APT56_07790 IPR011973 Phenylacetic acid degradation protein PaaD APT56_07790 IPR003736 Phenylacetic acid degradation-related domain APT56_07790 IPR006683 Thioesterase domain APT56_07790 IPR029069 HotDog domain superfamily APT56_07800 IPR002528 Multi antimicrobial extrusion protein APT56_07810 IPR034704 L28p-like APT56_07810 IPR042105 Ribosomal protein L31 superfamily APT56_07810 IPR027493 Ribosomal protein L31 type B APT56_07810 IPR002150 Ribosomal protein L31 APT56_07815 IPR017485 Tryptophan 2,3-dioxygenase, bacterial APT56_07815 IPR004981 Tryptophan 2,3-dioxygenase APT56_07815 IPR037217 Tryptophan/Indoleamine 2,3-dioxygenase-like APT56_07820 IPR007325 Kynurenine formamidase/cyclase-like APT56_07820 IPR017484 Kynurenine formamidase, bacteria APT56_07820 IPR037175 Kynurenine formamidase superfamily APT56_07825 IPR037518 MPN domain APT56_07825 IPR025657 RadC-like JAB domain APT56_07825 IPR010994 RuvA domain 2-like APT56_07825 IPR020891 Uncharacterised protein family UPF0758, conserved site APT56_07825 IPR001405 Uncharacterised protein family UPF0758 APT56_07835 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase APT56_07840 IPR034333 Glutathione S-transferases, class Zeta , N-terminal APT56_07840 IPR034330 Glutathione S-transferases, class Zeta , C-terminal APT56_07840 IPR005955 Glutathione S-transferases, class Zeta APT56_07840 IPR004046 Glutathione S-transferase, C-terminal APT56_07840 IPR004045 Glutathione S-transferase, N-terminal APT56_07840 IPR040079 Glutathione Transferase family APT56_07840 IPR036249 Thioredoxin-like superfamily APT56_07840 IPR010987 Glutathione S-transferase, C-terminal-like APT56_07840 IPR036282 Glutathione S-transferase, C-terminal domain superfamily APT56_07845 IPR001940 Peptidase S1C APT56_07845 IPR009003 Peptidase S1, PA clan APT56_07845 IPR011782 Peptidase S1C, Do APT56_07845 IPR036034 PDZ superfamily APT56_07845 IPR001478 PDZ domain APT56_07845 IPR041489 PDZ domain 6 APT56_07850 IPR013727 Two-component sensor kinase, N-terminal APT56_07850 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain APT56_07850 IPR003594 Histidine kinase/HSP90-like ATPase APT56_07850 IPR005467 Histidine kinase domain APT56_07850 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily APT56_07850 IPR004358 Signal transduction histidine kinase-related protein, C-terminal APT56_07850 IPR003660 HAMP domain APT56_07850 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APT56_07855 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_07855 IPR039420 Transcriptional regulatory protein WalR-like APT56_07855 IPR001789 Signal transduction response regulator, receiver domain APT56_07855 IPR011006 CheY-like superfamily APT56_07855 IPR001867 OmpR/PhoB-type DNA-binding domain APT56_07855 IPR016032 Signal transduction response regulator, C-terminal effector APT56_07870 IPR003495 CobW/HypB/UreG, nucleotide-binding domain APT56_07870 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal APT56_07870 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_07875 IPR036627 CobW-like, C-terminal domain superfamily APT56_07875 IPR003495 CobW/HypB/UreG, nucleotide-binding domain APT56_07875 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_07875 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal APT56_07880 IPR036390 Winged helix DNA-binding domain superfamily APT56_07880 IPR000847 Transcription regulator HTH, LysR APT56_07880 IPR005119 LysR, substrate-binding APT56_07880 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_07890 IPR005234 Chromosome segregation/condensation protein ScpB APT56_07890 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_07890 IPR036390 Winged helix DNA-binding domain superfamily APT56_07895 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site APT56_07895 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F APT56_07895 IPR006145 Pseudouridine synthase, RsuA/RluA APT56_07895 IPR036986 RNA-binding S4 domain superfamily APT56_07895 IPR002942 RNA-binding S4 domain APT56_07895 IPR020103 Pseudouridine synthase, catalytic domain superfamily APT56_07900 IPR035956 RimP, N-terminal domain superfamily APT56_07900 IPR003728 Ribosome maturation factor RimP APT56_07900 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily APT56_07900 IPR028998 Ribosome maturation factor RimP, C-terminal APT56_07900 IPR028989 Ribosome maturation factor RimP, N-terminal APT56_07905 IPR010214 Transcription termination factor NusA, C-terminal duplication APT56_07905 IPR010213 Transcription termination factor NusA APT56_07905 IPR030842 Transcription termination/antitermination protein NusA, bacterial APT56_07905 IPR004087 K Homology domain APT56_07905 IPR015946 K homology domain-like, alpha/beta APT56_07905 IPR025249 KH domain, NusA-like APT56_07905 IPR012340 Nucleic acid-binding, OB-fold APT56_07905 IPR036555 NusA, N-terminal domain superfamily APT56_07905 IPR022967 RNA-binding domain, S1 APT56_07905 IPR009019 K homology domain superfamily, prokaryotic type APT56_07905 IPR003029 S1 domain APT56_07905 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical APT56_07905 IPR013735 Transcription factor NusA, N-terminal APT56_07910 IPR009061 Putative DNA-binding domain superfamily APT56_07910 IPR013575 Initiation factor 2 associated domain, bacterial APT56_07910 IPR006847 Translation initiation factor IF-2, N-terminal APT56_07910 IPR015760 Translation initiation factor IF- 2 APT56_07910 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_07910 IPR005225 Small GTP-binding protein domain APT56_07910 IPR000795 Transcription factor, GTP-binding domain APT56_07910 IPR000178 Translation initiation factor aIF-2, bacterial-like APT56_07910 IPR023115 Translation initiation factor IF- 2, domain 3 APT56_07910 IPR036925 Translation initiation factor IF-2, domain 3 superfamily APT56_07910 IPR009000 Translation protein, beta-barrel domain superfamily APT56_07915 IPR015946 K homology domain-like, alpha/beta APT56_07915 IPR000238 Ribosome-binding factor A APT56_07915 IPR023799 Ribosome-binding factor A domain superfamily APT56_07920 IPR014780 tRNA pseudouridine synthase II, TruB APT56_07920 IPR032819 tRNA pseudouridylate synthase B, C-terminal APT56_07920 IPR020103 Pseudouridine synthase, catalytic domain superfamily APT56_07920 IPR002501 Pseudouridine synthase II, N-terminal APT56_07935 IPR036390 Winged helix DNA-binding domain superfamily APT56_07935 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_07935 IPR005119 LysR, substrate-binding APT56_07935 IPR000847 Transcription regulator HTH, LysR APT56_07940 IPR000847 Transcription regulator HTH, LysR APT56_07940 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_07940 IPR005119 LysR, substrate-binding APT56_07940 IPR036390 Winged helix DNA-binding domain superfamily APT56_07945 IPR005064 Bordetella uptake gene APT56_07945 IPR042100 Bordetella uptake gene, domain 1 APT56_07950 IPR036264 Bacterial exopeptidase dimerisation domain APT56_07950 IPR017145 Aminobenzoyl-glutamate utilization protein B APT56_07950 IPR017439 Amidohydrolase APT56_07950 IPR002933 Peptidase M20 APT56_07955 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG APT56_07955 IPR031100 LOG family APT56_07960 IPR036397 Ribonuclease H superfamily APT56_07960 IPR012337 Ribonuclease H-like superfamily APT56_07960 IPR019760 DNA-directed DNA polymerase, family A, conserved site APT56_07960 IPR002298 DNA polymerase A APT56_07960 IPR002421 5'-3' exonuclease, N-terminal APT56_07960 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal APT56_07960 IPR002562 3'-5' exonuclease domain APT56_07960 IPR036279 5'-3' exonuclease, C-terminal domain superfamily APT56_07960 IPR020045 DNA polymerase I-like, H3TH domain APT56_07960 IPR001098 DNA-directed DNA polymerase, family A, palm domain APT56_07960 IPR029060 PIN-like domain superfamily APT56_07960 IPR018320 DNA polymerase 1 APT56_07960 IPR008918 Helix-hairpin-helix motif, class 2 APT56_07970 IPR002925 Dienelactone hydrolase APT56_07970 IPR029058 Alpha/Beta hydrolase fold APT56_07975 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein APT56_07975 IPR003841 Sodium-dependent phosphate transport protein APT56_07980 IPR029009 Allosteric substrate binding domain superfamily APT56_07980 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form APT56_07980 IPR005131 Serine dehydratase beta chain APT56_07980 IPR005130 Serine dehydratase-like, alpha subunit APT56_07985 IPR022919 Peptidase M48, protease HtpX, putative APT56_07985 IPR001915 Peptidase M48 APT56_07995 IPR001763 Rhodanese-like domain APT56_07995 IPR036873 Rhodanese-like domain superfamily APT56_08005 IPR000847 Transcription regulator HTH, LysR APT56_08005 IPR005119 LysR, substrate-binding APT56_08005 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_08005 IPR036390 Winged helix DNA-binding domain superfamily APT56_08010 IPR003439 ABC transporter-like APT56_08010 IPR003593 AAA+ ATPase domain APT56_08010 IPR017871 ABC transporter, conserved site APT56_08010 IPR008995 Molybdate/tungstate binding, C-terminal APT56_08010 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_08010 IPR017666 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT2 APT56_08010 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal APT56_08010 IPR013611 Transport-associated OB, type 2 APT56_08020 IPR006323 Phosphonoacetaldehyde hydrolase APT56_08020 IPR023198 Phosphoglycolate phosphatase-like, domain 2 APT56_08020 IPR023214 HAD superfamily APT56_08020 IPR041492 Haloacid dehalogenase-like hydrolase APT56_08020 IPR006439 HAD hydrolase, subfamily IA APT56_08020 IPR036412 HAD-like superfamily APT56_08025 IPR026045 Ferric binding protein APT56_08030 IPR006076 FAD dependent oxidoreductase APT56_08030 IPR036188 FAD/NAD(P)-binding domain superfamily APT56_08030 IPR006281 Sarcosine oxidase, monomeric APT56_08045 IPR005064 Bordetella uptake gene APT56_08045 IPR042100 Bordetella uptake gene, domain 1 APT56_08055 IPR003761 Exonuclease VII, small subunit APT56_08055 IPR037004 Exonuclease VII, small subunit superfamily APT56_08060 IPR033749 Polyprenyl synthetase, conserved site APT56_08060 IPR008949 Isoprenoid synthase domain superfamily APT56_08060 IPR000092 Polyprenyl synthetase APT56_08065 IPR005475 Transketolase-like, pyrimidine-binding domain APT56_08065 IPR005477 Deoxyxylulose-5-phosphate synthase APT56_08065 IPR020826 Transketolase binding site APT56_08065 IPR033248 Transketolase, C-terminal domain APT56_08065 IPR005474 Transketolase, N-terminal APT56_08065 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II APT56_08065 IPR029061 Thiamin diphosphate-binding fold APT56_08070 IPR022838 GTP cyclohydrolase FolE2 APT56_08070 IPR003801 GTP cyclohydrolase FolE2/MptA APT56_08075 IPR008535 Protein of unknown function DUF817 APT56_08080 IPR000529 Ribosomal protein S6 APT56_08080 IPR020814 Ribosomal protein S6, plastid/chloroplast APT56_08080 IPR035980 Ribosomal protein S6 superfamily APT56_08080 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 APT56_08085 IPR023646 Primosomal replication protein PriB APT56_08085 IPR000424 Primosome PriB/single-strand DNA-binding APT56_08085 IPR012340 Nucleic acid-binding, OB-fold APT56_08090 IPR001648 Ribosomal protein S18 APT56_08090 IPR036870 Ribosomal protein S18 superfamily APT56_08090 IPR018275 Ribosomal protein S18, conserved site APT56_08095 IPR036791 Ribosomal protein L9, C-terminal domain superfamily APT56_08095 IPR020069 Ribosomal protein L9, C-terminal APT56_08095 IPR020594 Ribosomal protein L9, bacteria/chloroplast APT56_08095 IPR000244 Ribosomal protein L9 APT56_08095 IPR020070 Ribosomal protein L9, N-terminal APT56_08095 IPR009027 Ribosomal protein L9/RNase H1, N-terminal APT56_08095 IPR036935 Ribosomal protein L9, N-terminal domain superfamily APT56_08105 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal APT56_08105 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_08105 IPR007693 DNA helicase, DnaB-like, N-terminal APT56_08105 IPR003593 AAA+ ATPase domain APT56_08105 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily APT56_08105 IPR007692 DNA helicase, DnaB type APT56_08105 IPR007694 DNA helicase, DnaB-like, C-terminal APT56_08110 IPR016833 Putative sodium bile acid cotransporter APT56_08110 IPR038770 Sodium/solute symporter superfamily APT56_08115 IPR005255 PdxA family APT56_08125 IPR036390 Winged helix DNA-binding domain superfamily APT56_08125 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_08125 IPR019885 Transcription regulator HTH, AsnC-type, conserved site APT56_08125 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain APT56_08125 IPR011991 ArsR-like helix-turn-helix domain APT56_08125 IPR000485 AsnC-type HTH domain APT56_08125 IPR011008 Dimeric alpha-beta barrel APT56_08125 IPR019888 Transcription regulator AsnC-type APT56_08150 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APT56_08150 IPR036390 Winged helix DNA-binding domain superfamily APT56_08150 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_08150 IPR000524 Transcription regulator HTH, GntR APT56_08150 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APT56_08150 IPR015424 Pyridoxal phosphate-dependent transferase APT56_08150 IPR004839 Aminotransferase, class I/classII APT56_08170 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APT56_08170 IPR028261 Dihydroprymidine dehydrogenase domain II APT56_08170 IPR036188 FAD/NAD(P)-binding domain superfamily APT56_08170 IPR009051 Alpha-helical ferredoxin APT56_08170 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 APT56_08170 IPR023753 FAD/NAD(P)-binding domain APT56_08200 IPR002082 Aspartate carbamoyltransferase APT56_08200 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain APT56_08200 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding APT56_08200 IPR006130 Aspartate/ornithine carbamoyltransferase APT56_08200 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily APT56_08205 IPR039435 Diguanylate cyclase DosC, globin sensor domain APT56_08205 IPR012292 Globin/Protoglobin APT56_08205 IPR000160 GGDEF domain APT56_08205 IPR009050 Globin-like superfamily APT56_08205 IPR029787 Nucleotide cyclase APT56_08210 IPR007476 Putative exonuclease, RdgC APT56_08220 IPR005828 Major facilitator, sugar transporter-like APT56_08220 IPR036292 Proline/betaine transporter ProP, C-terminal APT56_08220 IPR015041 Osmosensory transporter coiled coil APT56_08220 IPR004736 MFS transporter, metabolite:H symporter APT56_08220 IPR005829 Sugar transporter, conserved site APT56_08220 IPR036259 MFS transporter superfamily APT56_08220 IPR020846 Major facilitator superfamily domain APT56_08225 IPR005467 Histidine kinase domain APT56_08225 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain APT56_08225 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily APT56_08225 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APT56_08225 IPR003594 Histidine kinase/HSP90-like ATPase APT56_08225 IPR003660 HAMP domain APT56_08225 IPR013727 Two-component sensor kinase, N-terminal APT56_08225 IPR004358 Signal transduction histidine kinase-related protein, C-terminal APT56_08230 IPR001789 Signal transduction response regulator, receiver domain APT56_08230 IPR001867 OmpR/PhoB-type DNA-binding domain APT56_08230 IPR011006 CheY-like superfamily APT56_08230 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_08230 IPR016032 Signal transduction response regulator, C-terminal effector APT56_08230 IPR039420 Transcriptional regulatory protein WalR-like APT56_08235 IPR020584 DNA recombination/repair protein RecA, conserved site APT56_08235 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_08235 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain APT56_08235 IPR023400 DNA recombination and repair protein RecA, C-terminal APT56_08235 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface APT56_08235 IPR003593 AAA+ ATPase domain APT56_08235 IPR013765 DNA recombination and repair protein RecA APT56_08240 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_08240 IPR003783 Regulatory protein RecX APT56_08245 IPR005119 LysR, substrate-binding APT56_08245 IPR037406 HTH-type transcriptional regulator MetR, PBP2 domain APT56_08245 IPR000847 Transcription regulator HTH, LysR APT56_08245 IPR036390 Winged helix DNA-binding domain superfamily APT56_08245 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_08250 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal APT56_08250 IPR006276 Cobalamin-independent methionine synthase APT56_08250 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal APT56_08250 IPR038071 UROD/MetE-like superfamily APT56_08255 IPR025110 AMP-binding enzyme, C-terminal domain APT56_08255 IPR036736 ACP-like superfamily APT56_08255 IPR029058 Alpha/Beta hydrolase fold APT56_08255 IPR010071 Amino acid adenylation domain APT56_08255 IPR042099 AMP-dependent synthetase-like superfamily APT56_08255 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily APT56_08255 IPR000873 AMP-dependent synthetase/ligase APT56_08255 IPR001242 Condensation domain APT56_08255 IPR020845 AMP-binding, conserved site APT56_08255 IPR020802 Polyketide synthase, thioesterase domain APT56_08255 IPR009081 Phosphopantetheine binding ACP domain APT56_08255 IPR001031 Thioesterase APT56_08255 IPR020806 Polyketide synthase, phosphopantetheine-binding domain APT56_08265 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site APT56_08265 IPR016102 Succinyl-CoA synthetase-like APT56_08265 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type APT56_08265 IPR013815 ATP-grasp fold, subdomain 1 APT56_08265 IPR005811 ATP-citrate lyase/succinyl-CoA ligase APT56_08265 IPR005809 Succinate--CoA synthetase, beta subunit APT56_08265 IPR011761 ATP-grasp fold APT56_08270 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site APT56_08270 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site APT56_08270 IPR003781 CoA-binding APT56_08270 IPR016102 Succinyl-CoA synthetase-like APT56_08270 IPR036291 NAD(P)-binding domain superfamily APT56_08270 IPR005811 ATP-citrate lyase/succinyl-CoA ligase APT56_08270 IPR005810 Succinyl-CoA ligase, alpha subunit APT56_08275 IPR005496 Integral membrane protein TerC APT56_08275 IPR022301 Integral membrane protein YjbE APT56_08280 IPR005496 Integral membrane protein TerC APT56_08280 IPR022301 Integral membrane protein YjbE APT56_08285 IPR000860 Porphobilinogen deaminase APT56_08285 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site APT56_08285 IPR022417 Porphobilinogen deaminase, N-terminal APT56_08285 IPR022418 Porphobilinogen deaminase, C-terminal APT56_08285 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily APT56_08305 IPR036649 Inorganic pyrophosphatase superfamily APT56_08305 IPR008162 Inorganic pyrophosphatase APT56_08315 IPR036291 NAD(P)-binding domain superfamily APT56_08315 IPR002347 Short-chain dehydrogenase/reductase SDR APT56_08315 IPR020904 Short-chain dehydrogenase/reductase, conserved site APT56_08330 IPR020904 Short-chain dehydrogenase/reductase, conserved site APT56_08330 IPR002347 Short-chain dehydrogenase/reductase SDR APT56_08330 IPR036291 NAD(P)-binding domain superfamily APT56_08330 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase APT56_08335 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal APT56_08335 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_08335 IPR017871 ABC transporter, conserved site APT56_08335 IPR003439 ABC transporter-like APT56_08335 IPR003593 AAA+ ATPase domain APT56_08340 IPR003439 ABC transporter-like APT56_08340 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein APT56_08340 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_08340 IPR003593 AAA+ ATPase domain APT56_08340 IPR017871 ABC transporter, conserved site APT56_08345 IPR001851 ABC transporter, permease APT56_08355 IPR011234 Fumarylacetoacetase-like, C-terminal APT56_08355 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily APT56_08365 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_08365 IPR003714 PhoH-like protein APT56_08365 IPR029060 PIN-like domain superfamily APT56_08365 IPR002716 PIN domain APT56_08370 IPR024706 Peroxiredoxin, AhpC-type APT56_08370 IPR013766 Thioredoxin domain APT56_08370 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant APT56_08370 IPR036249 Thioredoxin-like superfamily APT56_08380 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APT56_08380 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APT56_08380 IPR004839 Aminotransferase, class I/classII APT56_08380 IPR015424 Pyridoxal phosphate-dependent transferase APT56_08385 IPR036291 NAD(P)-binding domain superfamily APT56_08385 IPR016204 Homoserine dehydrogenase APT56_08385 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding APT56_08385 IPR002912 ACT domain APT56_08385 IPR019811 Homoserine dehydrogenase, conserved site APT56_08385 IPR001342 Homoserine dehydrogenase, catalytic APT56_08390 IPR001926 Pyridoxal-phosphate dependent enzyme APT56_08390 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site APT56_08390 IPR029144 Threonine synthase, N-terminal APT56_08390 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme APT56_08390 IPR037158 Threonine synthase, N-terminal domain superfamily APT56_08390 IPR004450 Threonine synthase-like APT56_08400 IPR028343 Fructose-1,6-bisphosphatase APT56_08400 IPR000146 Fructose-1,6-bisphosphatase class 1 APT56_08400 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal APT56_08405 IPR014782 Peptidase M1, membrane alanine aminopeptidase APT56_08405 IPR012779 Peptidase M1, alanyl aminopeptidase APT56_08405 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase APT56_08405 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold APT56_08405 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily APT56_08405 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily APT56_08405 IPR027268 Peptidase M4/M1, CTD superfamily APT56_08405 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal APT56_08405 IPR042097 Aminopeptidase N-like , N-terminal APT56_08415 IPR001801 Histone-like protein H-NS APT56_08415 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily APT56_08415 IPR027444 Histone-like protein H-NS, C-terminal domain APT56_08420 IPR035068 Metalloprotease TldD/PmbA, N-terminal APT56_08420 IPR036059 Metalloprotease TldD/PmbA superfamily APT56_08420 IPR025502 TldD APT56_08420 IPR002510 Metalloprotease TldD/PmbA APT56_08425 IPR006218 DAHP synthetase I/KDSA APT56_08425 IPR013785 Aldolase-type TIM barrel APT56_08425 IPR006219 DHAP synthase, class 1 APT56_08430 IPR016166 FAD-binding domain, PCMH-type APT56_08430 IPR036318 FAD-binding, type PCMH-like superfamily APT56_08430 IPR016164 FAD-linked oxidase-like, C-terminal APT56_08430 IPR004113 FAD-linked oxidase, C-terminal APT56_08430 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 APT56_08430 IPR006094 FAD linked oxidase, N-terminal APT56_08430 IPR004490 Glycolate oxidase subunit GlcD APT56_08435 IPR036318 FAD-binding, type PCMH-like superfamily APT56_08435 IPR006094 FAD linked oxidase, N-terminal APT56_08435 IPR004490 Glycolate oxidase subunit GlcD APT56_08435 IPR004113 FAD-linked oxidase, C-terminal APT56_08435 IPR016164 FAD-linked oxidase-like, C-terminal APT56_08435 IPR016166 FAD-binding domain, PCMH-type APT56_08435 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 APT56_08440 IPR006094 FAD linked oxidase, N-terminal APT56_08440 IPR016166 FAD-binding domain, PCMH-type APT56_08440 IPR036318 FAD-binding, type PCMH-like superfamily APT56_08440 IPR016169 FAD-binding, type PCMH, subdomain 2 APT56_08440 IPR016164 FAD-linked oxidase-like, C-terminal APT56_08445 IPR009051 Alpha-helical ferredoxin APT56_08445 IPR012257 Glycolate oxidase, iron-sulphur subunit APT56_08445 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APT56_08445 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APT56_08445 IPR004017 Cysteine-rich domain APT56_08450 IPR029035 DHS-like NAD/FAD-binding domain superfamily APT56_08450 IPR034300 NADP transhydrogenase beta-like domain APT56_08450 IPR012136 NADP transhydrogenase, beta subunit APT56_08455 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal APT56_08460 IPR036291 NAD(P)-binding domain superfamily APT56_08460 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 APT56_08460 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 APT56_08460 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain APT56_08460 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal APT56_08470 IPR005064 Bordetella uptake gene APT56_08470 IPR042100 Bordetella uptake gene, domain 1 APT56_08475 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_08475 IPR036390 Winged helix DNA-binding domain superfamily APT56_08475 IPR005119 LysR, substrate-binding APT56_08475 IPR000847 Transcription regulator HTH, LysR APT56_08480 IPR004506 tRNA-specific 2-thiouridylase APT56_08480 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT56_08480 IPR023382 Adenine nucleotide alpha hydrolase-like domains APT56_08485 IPR002781 Transmembrane protein TauE-like APT56_08490 IPR010987 Glutathione S-transferase, C-terminal-like APT56_08490 IPR004045 Glutathione S-transferase, N-terminal APT56_08490 IPR036249 Thioredoxin-like superfamily APT56_08490 IPR034343 Uncharacterized GST-like protein YibF APT56_08490 IPR004046 Glutathione S-transferase, C-terminal APT56_08490 IPR036282 Glutathione S-transferase, C-terminal domain superfamily APT56_08495 IPR013539 Adenylosuccinate lyase PurB, C-terminal APT56_08495 IPR004769 Adenylosuccinate lyase APT56_08495 IPR008948 L-Aspartase-like APT56_08495 IPR022761 Fumarate lyase, N-terminal APT56_08495 IPR000362 Fumarate lyase family APT56_08495 IPR020557 Fumarate lyase, conserved site APT56_08495 IPR024083 Fumarase/histidase, N-terminal APT56_08500 IPR002321 Cytochrome c, class II APT56_08500 IPR010980 Cytochrome c/b562 APT56_08500 IPR012127 Cytochrome c prime APT56_08500 IPR015984 Cytochrome c prime, subgroup APT56_08540 IPR025291 Protein of unknown function DUF4153 APT56_08630 IPR002104 Integrase, catalytic domain APT56_08630 IPR013762 Integrase-like, catalytic domain superfamily APT56_08630 IPR010998 Integrase/recombinase, N-terminal APT56_08630 IPR035069 TTHA1013/TTHA0281-like APT56_08630 IPR011010 DNA breaking-rejoining enzyme, catalytic core APT56_08650 IPR005330 MHYT domain APT56_08650 IPR029787 Nucleotide cyclase APT56_08650 IPR000160 GGDEF domain APT56_08650 IPR001633 EAL domain APT56_08650 IPR035919 EAL domain superfamily APT56_08660 IPR000620 EamA domain APT56_08695 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT56_08695 IPR017804 Methyltransferase EgtD-like APT56_08695 IPR019257 Histidine-specific methyltransferase, SAM-dependent APT56_08695 IPR032888 Histidine N-alpha-methyltransferase, Actinobacteria-type APT56_08695 IPR035094 Histidine N-alpha-methyltransferase APT56_08705 IPR030874 Cardiolipin synthase, Firmicutes-type APT56_08705 IPR022924 Cardiolipin synthase APT56_08705 IPR027379 Cardiolipin synthase N-terminal APT56_08705 IPR025202 Phospholipase D-like domain APT56_08705 IPR001736 Phospholipase D/Transphosphatidylase APT56_08710 IPR013785 Aldolase-type TIM barrel APT56_08710 IPR024188 Glutamate synthase large subunit-like protein APT56_08710 IPR027283 Glutamate synthase large subunit-like protein, bacteria APT56_08710 IPR002932 Glutamate synthase domain APT56_08715 IPR007272 Sulphur transport domain APT56_08720 IPR004776 Membrane transport protein APT56_08730 IPR039143 Glucosamine 6-phosphate N-acetyltransferase APT56_08730 IPR016181 Acyl-CoA N-acyltransferase APT56_08730 IPR000182 GNAT domain APT56_08750 IPR022966 Ribonuclease II/R, conserved site APT56_08750 IPR012340 Nucleic acid-binding, OB-fold APT56_08750 IPR013223 Ribonuclease B, N-terminal OB domain APT56_08750 IPR001900 Ribonuclease II/R APT56_08750 IPR004476 Ribonuclease II/ribonuclease R APT56_08750 IPR011805 Ribonuclease R APT56_08750 IPR040476 RNase II/RNase R, cold shock domain APT56_08750 IPR013668 Ribonuclease R winged-helix domain APT56_08750 IPR003029 S1 domain APT56_08750 IPR022967 RNA-binding domain, S1 APT56_08750 IPR011129 Cold shock domain APT56_08755 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APT56_08755 IPR013123 RNA 2-O ribose methyltransferase, substrate binding APT56_08755 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB APT56_08755 IPR004441 RNA methyltransferase TrmH family APT56_08755 IPR029064 50S ribosomal protein L30e-like APT56_08755 IPR029028 Alpha/beta knot methyltransferases APT56_08755 IPR001537 tRNA/rRNA methyltransferase, SpoU type APT56_08760 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APT56_08760 IPR015424 Pyridoxal phosphate-dependent transferase APT56_08760 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APT56_08760 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme APT56_08765 IPR023550 PKHD-type hydroxylase APT56_08765 IPR006620 Prolyl 4-hydroxylase, alpha subunit APT56_08765 IPR041097 PKHD-type hydroxylase C-terminal domain APT56_08765 IPR005123 Oxoglutarate/iron-dependent dioxygenase APT56_08770 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily APT56_08770 IPR000119 Histone-like DNA-binding protein APT56_08770 IPR020816 Histone-like DNA-binding protein, conserved site APT56_08785 IPR002898 MotA/TolQ/ExbB proton channel APT56_08790 IPR003400 Biopolymer transport protein ExbD/TolR APT56_08795 IPR001789 Signal transduction response regulator, receiver domain APT56_08795 IPR039420 Transcriptional regulatory protein WalR-like APT56_08795 IPR001867 OmpR/PhoB-type DNA-binding domain APT56_08795 IPR011006 CheY-like superfamily APT56_08795 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_08800 IPR005467 Histidine kinase domain APT56_08800 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain APT56_08800 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily APT56_08800 IPR004358 Signal transduction histidine kinase-related protein, C-terminal APT56_08800 IPR013727 Two-component sensor kinase, N-terminal APT56_08800 IPR003594 Histidine kinase/HSP90-like ATPase APT56_08800 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APT56_08805 IPR003855 Potassium transporter APT56_08805 IPR023051 Potassium uptake protein, low affinity, Kup APT56_08810 IPR025948 HTH-like domain APT56_08810 IPR001584 Integrase, catalytic core APT56_08810 IPR012337 Ribonuclease H-like superfamily APT56_08810 IPR036397 Ribonuclease H superfamily APT56_08820 IPR001518 Argininosuccinate synthase APT56_08820 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT56_08820 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail APT56_08820 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body APT56_08820 IPR018223 Argininosuccinate synthase, conserved site APT56_08820 IPR023437 Argininosuccinate synthase, type 2 subfamily APT56_08825 IPR010131 RND efflux system, outer membrane lipoprotein, NodT APT56_08825 IPR003423 Outer membrane efflux protein APT56_08830 IPR039562 Membrane fusion protein, biotin-lipoyl like domain APT56_08830 IPR022824 Multidrug resistance protein MdtA APT56_08830 IPR006143 RND efflux pump, membrane fusion protein APT56_08835 IPR022831 Multidrug resistance protein MdtB APT56_08835 IPR001036 Acriflavin resistance protein APT56_08835 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APT56_08840 IPR001867 OmpR/PhoB-type DNA-binding domain APT56_08840 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response APT56_08840 IPR001789 Signal transduction response regulator, receiver domain APT56_08840 IPR039420 Transcriptional regulatory protein WalR-like APT56_08840 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_08840 IPR011006 CheY-like superfamily APT56_08845 IPR005467 Histidine kinase domain APT56_08845 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain APT56_08845 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily APT56_08845 IPR004358 Signal transduction histidine kinase-related protein, C-terminal APT56_08845 IPR006290 Heavy metal sensor kinase APT56_08845 IPR003660 HAMP domain APT56_08845 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APT56_08845 IPR003594 Histidine kinase/HSP90-like ATPase APT56_08850 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_08850 IPR000847 Transcription regulator HTH, LysR APT56_08850 IPR005119 LysR, substrate-binding APT56_08850 IPR036390 Winged helix DNA-binding domain superfamily APT56_08855 IPR032466 Metal-dependent hydrolase APT56_08855 IPR006680 Amidohydrolase-related APT56_08875 IPR029058 Alpha/Beta hydrolase fold APT56_08875 IPR000073 Alpha/beta hydrolase fold-1 APT56_08880 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding APT56_08880 IPR002292 Ornithine/putrescine carbamoyltransferase APT56_08880 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily APT56_08880 IPR006130 Aspartate/ornithine carbamoyltransferase APT56_08880 IPR024904 Ornithine carbamoyltransferase APT56_08880 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain APT56_08885 IPR005814 Aminotransferase class-III APT56_08885 IPR015424 Pyridoxal phosphate-dependent transferase APT56_08885 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APT56_08885 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APT56_08885 IPR004636 Acetylornithine/Succinylornithine transaminase family APT56_08900 IPR015942 Asp/Glu/hydantoin racemase APT56_08915 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_08915 IPR025966 Oligopeptide transport permease C-like, N-terminal domain APT56_08915 IPR035906 MetI-like superfamily APT56_08920 IPR032466 Metal-dependent hydrolase APT56_08920 IPR011059 Metal-dependent hydrolase, composite domain superfamily APT56_08920 IPR006680 Amidohydrolase-related APT56_08925 IPR032466 Metal-dependent hydrolase APT56_08925 IPR011059 Metal-dependent hydrolase, composite domain superfamily APT56_08925 IPR023512 Deaminase MtaD/DadD APT56_08925 IPR006680 Amidohydrolase-related APT56_08930 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal APT56_08930 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_08930 IPR017871 ABC transporter, conserved site APT56_08930 IPR003439 ABC transporter-like APT56_08930 IPR003593 AAA+ ATPase domain APT56_08935 IPR003439 ABC transporter-like APT56_08935 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_08935 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal APT56_08935 IPR017871 ABC transporter, conserved site APT56_08935 IPR003593 AAA+ ATPase domain APT56_08940 IPR004681 TRAP transporter large membrane protein DctM APT56_08940 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit APT56_08950 IPR004682 TRAP transporter solute receptor, DctP family APT56_08950 IPR038404 TRAP transporter solute receptor DctP superfamily APT56_08950 IPR018389 TRAP transporter solute receptor DctP/TeaA APT56_08955 IPR038766 Membrane component of ABC transporter, predicted APT56_08965 IPR022826 3-deoxy-D-manno-octulosonic acid kinase APT56_08965 IPR011009 Protein kinase-like domain superfamily APT56_08970 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein APT56_08970 IPR006059 Bacterial extracellular solute-binding protein APT56_08975 IPR003593 AAA+ ATPase domain APT56_08975 IPR003439 ABC transporter-like APT56_08975 IPR017871 ABC transporter, conserved site APT56_08975 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_08975 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit APT56_08975 IPR013611 Transport-associated OB, type 2 APT56_08975 IPR008995 Molybdate/tungstate binding, C-terminal APT56_08980 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_08980 IPR035906 MetI-like superfamily APT56_08985 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_08985 IPR035906 MetI-like superfamily APT56_08995 IPR011034 Formyl transferase-like, C-terminal domain superfamily APT56_08995 IPR003180 Methylpurine-DNA glycosylase APT56_08995 IPR036995 Methylpurine-DNA glycosylase superfamily APT56_09005 IPR003798 DNA recombination RmuC APT56_09010 IPR000120 Amidase APT56_09010 IPR020556 Amidase, conserved site APT56_09010 IPR023631 Amidase signature domain APT56_09010 IPR036928 Amidase signature (AS) superfamily APT56_09015 IPR034184 Putative acyl-CoA dehydrogenase AidB APT56_09015 IPR006089 Acyl-CoA dehydrogenase, conserved site APT56_09015 IPR041504 Adaptive response protein AidB, N-terminal APT56_09015 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily APT56_09015 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal APT56_09015 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal APT56_09015 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain APT56_09020 IPR037171 NagB/RpiA transferase-like APT56_09020 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup APT56_09020 IPR004788 Ribose 5-phosphate isomerase, type A APT56_09025 IPR026022 PhoU domain APT56_09025 IPR038078 PhoU-like domain superfamily APT56_09025 IPR028366 Phosphate transport system protein PhoU APT56_09030 IPR008475 Bacterial phospholipase C, C-terminal domain APT56_09030 IPR007312 Phosphoesterase APT56_09030 IPR017767 Bacterial phospholipase C, phosphocholine-specific APT56_09030 IPR017850 Alkaline-phosphatase-like, core domain superfamily APT56_09030 IPR006311 Twin-arginine translocation pathway, signal sequence APT56_09035 IPR007457 Fe(II) trafficking protein YggX APT56_09035 IPR036766 Fe(II) trafficking protein YggX superfamily APT56_09040 IPR036393 Acetylglutamate kinase-like superfamily APT56_09040 IPR010167 Amino-acid N-acetyltransferase APT56_09040 IPR033719 N-acetylglutamate synthase, kinase-like domain APT56_09040 IPR000182 GNAT domain APT56_09040 IPR001048 Aspartate/glutamate/uridylate kinase APT56_09040 IPR016181 Acyl-CoA N-acyltransferase APT56_09045 IPR010222 RNA helicase HrpA APT56_09045 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_09045 IPR024590 RNA helicase HrpA, C-terminal APT56_09045 IPR001650 Helicase, C-terminal APT56_09045 IPR014001 Helicase superfamily 1/2, ATP-binding domain APT56_09045 IPR007502 Helicase-associated domain APT56_09045 IPR011709 Domain of unknown function DUF1605 APT56_09045 IPR011545 DEAD/DEAH box helicase domain APT56_09045 IPR003593 AAA+ ATPase domain APT56_09050 IPR035906 MetI-like superfamily APT56_09050 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_09055 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_09055 IPR003439 ABC transporter-like APT56_09055 IPR017871 ABC transporter, conserved site APT56_09055 IPR003593 AAA+ ATPase domain APT56_09065 IPR029460 DNA polymerase, helix-hairpin-helix motif APT56_09065 IPR016195 Polymerase/histidinol phosphatase-like APT56_09065 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type APT56_09065 IPR003141 Polymerase/histidinol phosphatase, N-terminal APT56_09065 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain APT56_09065 IPR040982 DNA polymerase III alpha subunit finger domain APT56_09065 IPR004013 PHP domain APT56_09065 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain APT56_09065 IPR004805 DNA polymerase III, alpha subunit APT56_09070 IPR001296 Glycosyl transferase, family 1 APT56_09075 IPR002509 NodB homology domain APT56_09075 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel APT56_09080 IPR001173 Glycosyltransferase 2-like APT56_09080 IPR029044 Nucleotide-diphospho-sugar transferases APT56_09090 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel APT56_09090 IPR002509 NodB homology domain APT56_09100 IPR005358 Putative zinc- or iron-chelating domain containing protein APT56_09115 IPR011917 ABC transporter, lipid A export, MsbA APT56_09115 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_09115 IPR003439 ABC transporter-like APT56_09115 IPR017871 ABC transporter, conserved site APT56_09115 IPR011527 ABC transporter type 1, transmembrane domain APT56_09115 IPR003593 AAA+ ATPase domain APT56_09115 IPR036640 ABC transporter type 1, transmembrane domain superfamily APT56_09120 IPR036291 NAD(P)-binding domain superfamily APT56_09120 IPR038770 Sodium/solute symporter superfamily APT56_09120 IPR004771 K+/H+ exchanger APT56_09120 IPR006153 Cation/H+ exchanger APT56_09120 IPR003148 Regulator of K+ conductance, N-terminal APT56_09130 IPR029787 Nucleotide cyclase APT56_09130 IPR005330 MHYT domain APT56_09130 IPR001633 EAL domain APT56_09130 IPR035919 EAL domain superfamily APT56_09130 IPR000160 GGDEF domain APT56_09135 IPR029787 Nucleotide cyclase APT56_09135 IPR000160 GGDEF domain APT56_09135 IPR013515 Phytochrome, central region APT56_09135 IPR016132 Phytochrome chromophore attachment domain APT56_09135 IPR001294 Phytochrome APT56_09135 IPR003018 GAF domain APT56_09135 IPR029016 GAF-like domain superfamily APT56_09135 IPR001633 EAL domain APT56_09135 IPR035919 EAL domain superfamily APT56_09140 IPR021413 Protein of unknown function DUF3053 APT56_09145 IPR012340 Nucleic acid-binding, OB-fold APT56_09145 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G APT56_09145 IPR022967 RNA-binding domain, S1 APT56_09145 IPR004659 Ribonuclease E/G APT56_09145 IPR003029 S1 domain APT56_09175 IPR009057 Homeobox-like domain superfamily APT56_09175 IPR011006 CheY-like superfamily APT56_09175 IPR003593 AAA+ ATPase domain APT56_09175 IPR002078 RNA polymerase sigma factor 54 interaction domain APT56_09175 IPR001789 Signal transduction response regulator, receiver domain APT56_09175 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 APT56_09175 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 APT56_09175 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_09175 IPR025944 Sigma-54 interaction domain, conserved site APT56_09175 IPR002197 DNA binding HTH domain, Fis-type APT56_09180 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APT56_09180 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily APT56_09180 IPR029151 Periplasmic sensor-like domain superfamily APT56_09180 IPR033479 Double Cache domain 1 APT56_09180 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain APT56_09180 IPR005467 Histidine kinase domain APT56_09180 IPR004358 Signal transduction histidine kinase-related protein, C-terminal APT56_09180 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) APT56_09180 IPR003594 Histidine kinase/HSP90-like ATPase APT56_09185 IPR036458 Sodium:dicarboxylate symporter superfamily APT56_09185 IPR023954 C4-dicarboxylate transport protein APT56_09185 IPR001991 Sodium:dicarboxylate symporter APT56_09185 IPR018107 Sodium:dicarboxylate symporter, conserved site APT56_09190 IPR029001 Inosine triphosphate pyrophosphatase-like APT56_09190 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein APT56_09195 IPR029028 Alpha/beta knot methyltransferases APT56_09195 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APT56_09195 IPR003742 RNA methyltransferase RlmH APT56_09200 IPR004394 Protein Iojap/ribosomal silencing factor RsfS APT56_09205 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase APT56_09205 IPR004821 Cytidyltransferase-like domain APT56_09205 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT56_09210 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily APT56_09210 IPR001260 Coproporphyrinogen III oxidase, aerobic APT56_09210 IPR018375 Coproporphyrinogen III oxidase, conserved site APT56_09215 IPR011054 Rudiment single hybrid motif APT56_09215 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal APT56_09215 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily APT56_09215 IPR013815 ATP-grasp fold, subdomain 1 APT56_09215 IPR020560 Phosphoribosylglycinamide synthetase, C-domain APT56_09215 IPR000115 Phosphoribosylglycinamide synthetase APT56_09215 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain APT56_09215 IPR016185 Pre-ATP-grasp domain superfamily APT56_09215 IPR011761 ATP-grasp fold APT56_09220 IPR029072 YebC-like APT56_09220 IPR017856 Integrase-like, N-terminal APT56_09220 IPR026564 Transcriptional regulator TACO1-like, domain 3 APT56_09220 IPR002876 Transcriptional regulator TACO1-like APT56_09225 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_09225 IPR033186 Helicase HerA-like C-terminal APT56_09230 IPR011829 Tartrate dehydrogenase APT56_09230 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site APT56_09230 IPR024084 Isopropylmalate dehydrogenase-like domain APT56_09240 IPR004638 Drug resistance transporter EmrB-like APT56_09240 IPR020846 Major facilitator superfamily domain APT56_09240 IPR036259 MFS transporter superfamily APT56_09240 IPR011701 Major facilitator superfamily APT56_09245 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APT56_09245 IPR005694 Efflux pump membrane protein APT56_09250 IPR003423 Outer membrane efflux protein APT56_09250 IPR010131 RND efflux system, outer membrane lipoprotein, NodT APT56_09255 IPR000835 MarR-type HTH domain APT56_09255 IPR023187 Transcriptional regulator MarR-type, conserved site APT56_09255 IPR036390 Winged helix DNA-binding domain superfamily APT56_09255 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_09270 IPR013154 Alcohol dehydrogenase, N-terminal APT56_09270 IPR036291 NAD(P)-binding domain superfamily APT56_09270 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site APT56_09270 IPR020843 Polyketide synthase, enoylreductase domain APT56_09270 IPR011032 GroES-like superfamily APT56_09270 IPR013149 Alcohol dehydrogenase, C-terminal APT56_09275 IPR015590 Aldehyde dehydrogenase domain APT56_09275 IPR029510 Aldehyde dehydrogenase, glutamic acid active site APT56_09275 IPR016162 Aldehyde dehydrogenase, N-terminal APT56_09275 IPR016163 Aldehyde dehydrogenase, C-terminal APT56_09275 IPR016160 Aldehyde dehydrogenase, cysteine active site APT56_09275 IPR016161 Aldehyde/histidinol dehydrogenase APT56_09285 IPR009451 Amine dehydrogenase heavy chain APT56_09285 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like APT56_09285 IPR015943 WD40/YVTN repeat-like-containing domain superfamily APT56_09295 IPR013766 Thioredoxin domain APT56_09295 IPR013478 Methylamine dehydrogenase accessory protein MauD APT56_09295 IPR036249 Thioredoxin-like superfamily APT56_09295 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant APT56_09300 IPR016008 Amine dehydrogenase light chain APT56_09300 IPR006311 Twin-arginine translocation pathway, signal sequence APT56_09300 IPR036560 Methylamine/Aralkylamine dehydrogenase light chain superfamily APT56_09300 IPR013504 Methylamine/Aralkylamine dehydrogenase light chain, C-terminal domain APT56_09310 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like APT56_09315 IPR003828 Epoxyqueuosine reductase QueH APT56_09320 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme APT56_09320 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain APT56_09320 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase APT56_09335 IPR036269 Rho termination factor, N-terminal domain superfamily APT56_09335 IPR011112 Rho termination factor, N-terminal APT56_09335 IPR041703 Transcription termination factor Rho, ATP binding domain APT56_09335 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_09335 IPR011129 Cold shock domain APT56_09335 IPR011113 Rho termination factor, RNA-binding domain APT56_09335 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain APT56_09335 IPR012340 Nucleic acid-binding, OB-fold APT56_09335 IPR003593 AAA+ ATPase domain APT56_09335 IPR004665 Transcription termination factor Rho APT56_09340 IPR005746 Thioredoxin APT56_09340 IPR036249 Thioredoxin-like superfamily APT56_09340 IPR017937 Thioredoxin, conserved site APT56_09340 IPR013766 Thioredoxin domain APT56_09345 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative APT56_09345 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal APT56_09345 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 APT56_09345 IPR003594 Histidine kinase/HSP90-like ATPase APT56_09345 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APT56_09345 IPR001241 DNA topoisomerase, type IIA APT56_09345 IPR002288 DNA gyrase B subunit, C-terminal APT56_09345 IPR020568 Ribosomal protein S5 domain 2-type fold APT56_09345 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APT56_09345 IPR006171 TOPRIM domain APT56_09345 IPR013760 DNA topoisomerase, type IIA-like domain superfamily APT56_09345 IPR018522 DNA topoisomerase, type IIA, conserved site APT56_09355 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta APT56_09355 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal APT56_09355 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily APT56_09355 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative APT56_09355 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal APT56_09355 IPR013760 DNA topoisomerase, type IIA-like domain superfamily APT56_09360 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily APT56_09360 IPR013570 Transcription regulator YsiA, C-terminal APT56_09360 IPR001647 DNA-binding HTH domain, TetR-type APT56_09360 IPR009057 Homeobox-like domain superfamily APT56_09365 IPR007349 Domain of unknown function DUF418 APT56_09370 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APT56_09370 IPR005814 Aminotransferase class-III APT56_09370 IPR015424 Pyridoxal phosphate-dependent transferase APT56_09370 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APT56_09380 IPR000835 MarR-type HTH domain APT56_09380 IPR023187 Transcriptional regulator MarR-type, conserved site APT56_09380 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_09380 IPR036390 Winged helix DNA-binding domain superfamily APT56_09385 IPR016181 Acyl-CoA N-acyltransferase APT56_09385 IPR012772 L-2,4-diaminobutyric acid acetyltransferase APT56_09385 IPR000182 GNAT domain APT56_09390 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APT56_09390 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APT56_09390 IPR012773 Ectoine biosynthetic protein APT56_09390 IPR004637 2,4-diaminobutyrate 4-transaminase APT56_09390 IPR005814 Aminotransferase class-III APT56_09390 IPR015424 Pyridoxal phosphate-dependent transferase APT56_09395 IPR011051 RmlC-like cupin domain superfamily APT56_09395 IPR010462 Ectoine synthase APT56_09395 IPR014710 RmlC-like jelly roll fold APT56_09400 IPR012774 Ectoine dioxygenase APT56_09400 IPR008775 Phytanoyl-CoA dioxygenase APT56_09405 IPR011037 Pyruvate kinase-like, insert domain superfamily APT56_09405 IPR036010 2Fe-2S ferredoxin-like superfamily APT56_09405 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain APT56_09405 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site APT56_09405 IPR012675 Beta-grasp domain superfamily APT56_09405 IPR005302 Molybdenum cofactor sulfurase, C-terminal APT56_09405 IPR005303 MOSC, N-terminal beta barrel APT56_09410 IPR000390 Small multidrug resistance protein family APT56_09415 IPR009010 Aspartate decarboxylase-like domain superfamily APT56_09415 IPR003190 Aspartate decarboxylase APT56_09420 IPR036010 2Fe-2S ferredoxin-like superfamily APT56_09420 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain APT56_09420 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site APT56_09420 IPR012675 Beta-grasp domain superfamily APT56_09420 IPR017927 FAD-binding domain, ferredoxin reductase-type APT56_09420 IPR017938 Riboflavin synthase-like beta-barrel APT56_09420 IPR001433 Oxidoreductase FAD/NAD(P)-binding APT56_09420 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain APT56_09420 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain APT56_09425 IPR036188 FAD/NAD(P)-binding domain superfamily APT56_09425 IPR023080 D-amino acid dehydrogenase DadA APT56_09425 IPR006076 FAD dependent oxidoreductase APT56_09430 IPR006061 Solute-binding family 1, conserved site APT56_09430 IPR006059 Bacterial extracellular solute-binding protein APT56_09440 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily APT56_09440 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain APT56_09440 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal APT56_09440 IPR002318 Alanine-tRNA ligase, class IIc APT56_09440 IPR003156 DHHA1 domain APT56_09440 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily APT56_09440 IPR009000 Translation protein, beta-barrel domain superfamily APT56_09440 IPR012947 Threonyl/alanyl tRNA synthetase, SAD APT56_09440 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria APT56_09445 IPR036868 TusA-like domain superfamily APT56_09445 IPR001455 TusA-like domain APT56_09455 IPR023803 Ribosomal protein S16 domain superfamily APT56_09455 IPR000307 Ribosomal protein S16 APT56_09460 IPR011961 16S rRNA processing protein RimM APT56_09460 IPR011033 PRC-barrel-like superfamily APT56_09460 IPR009000 Translation protein, beta-barrel domain superfamily APT56_09460 IPR002676 RimM, N-terminal APT56_09460 IPR036976 RimM, N-terminal domain superfamily APT56_09465 IPR029028 Alpha/beta knot methyltransferases APT56_09465 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria APT56_09465 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal APT56_09465 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APT56_09465 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain APT56_09470 IPR010982 Lambda repressor-like, DNA-binding domain superfamily APT56_09470 IPR001387 Cro/C1-type helix-turn-helix domain APT56_09475 IPR001320 Ionotropic glutamate receptor APT56_09475 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter APT56_09475 IPR018313 Solute-binding protein family 3, conserved site APT56_09475 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APT56_09480 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain APT56_09480 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_09480 IPR035906 MetI-like superfamily APT56_09490 IPR006076 FAD dependent oxidoreductase APT56_09490 IPR036188 FAD/NAD(P)-binding domain superfamily APT56_09495 IPR002303 Valine-tRNA ligase APT56_09495 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily APT56_09495 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm APT56_09495 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain APT56_09495 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding APT56_09495 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm APT56_09495 IPR002300 Aminoacyl-tRNA synthetase, class Ia APT56_09495 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding APT56_09495 IPR033705 Valyl tRNA synthetase, anticodon-binding domain APT56_09495 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site APT56_09495 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT56_09500 IPR001564 Nucleoside diphosphate kinase APT56_09500 IPR036850 Nucleoside diphosphate kinase-like domain superfamily APT56_09500 IPR023005 Nucleoside diphosphate kinase, active site APT56_09500 IPR034907 Nucleoside diphosphate kinase-like domain APT56_09505 IPR013785 Aldolase-type TIM barrel APT56_09505 IPR007197 Radical SAM APT56_09505 IPR040072 Methyltransferase (Class A) APT56_09505 IPR027492 Dual-specificity RNA methyltransferase RlmN APT56_09505 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr APT56_09515 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type APT56_09515 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial APT56_09515 IPR011005 Dihydropteroate synthase-like APT56_09520 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit APT56_09520 IPR015807 Histidine-tRNA ligase APT56_09520 IPR006195 Aminoacyl-tRNA synthetase, class II APT56_09520 IPR036621 Anticodon-binding domain superfamily APT56_09520 IPR004154 Anticodon-binding APT56_09520 IPR033656 Histidyl-anticodon-binding APT56_09520 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain APT56_09525 IPR026039 Uncharacterised protein family UPF0070 APT56_09525 IPR018704 Tetratricopeptide repeat-like domain APT56_09525 IPR011990 Tetratricopeptide-like helical domain superfamily APT56_09530 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily APT56_09530 IPR015943 WD40/YVTN repeat-like-containing domain superfamily APT56_09530 IPR002372 Pyrrolo-quinoline quinone repeat APT56_09530 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APT56_09530 IPR017687 Outer membrane protein assembly factor BamB APT56_09535 IPR003593 AAA+ ATPase domain APT56_09535 IPR031166 EngA-type guanine nucleotide-binding (G) domain APT56_09535 IPR005225 Small GTP-binding protein domain APT56_09535 IPR016484 GTP-binding protein EngA APT56_09535 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_09535 IPR032859 GTPase Der, C-terminal KH-domain-like APT56_09535 IPR015946 K homology domain-like, alpha/beta APT56_09535 IPR006073 GTP binding domain APT56_09540 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site APT56_09540 IPR004839 Aminotransferase, class I/classII APT56_09540 IPR015424 Pyridoxal phosphate-dependent transferase APT56_09540 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APT56_09540 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APT56_09540 IPR005861 Histidinol-phosphate aminotransferase family APT56_09545 IPR010920 LSM domain superfamily APT56_09545 IPR005001 RNA-binding protein Hfq APT56_09550 IPR016496 GTPase HflX APT56_09550 IPR025121 GTPase HflX, N-terminal APT56_09550 IPR042108 GTPase HflX, N-terminal domain superfamily APT56_09550 IPR032305 GTP-binding protein, middle domain APT56_09550 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_09550 IPR035647 EF-G domain III/V-like APT56_09550 IPR030394 HflX-type guanine nucleotide-binding (G) domain APT56_09550 IPR006073 GTP binding domain APT56_09555 IPR001107 Band 7 domain APT56_09555 IPR036013 Band 7/SPFH domain superfamily APT56_09555 IPR010201 HflK APT56_09555 IPR020980 Menbrane protein HflK, N-terminal APT56_09555 IPR001972 Stomatin family APT56_09560 IPR036013 Band 7/SPFH domain superfamily APT56_09560 IPR001107 Band 7 domain APT56_09560 IPR010200 HflC APT56_09565 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain APT56_09565 IPR004517 ATP phosphoribosyltransferase regulatory subunit APT56_09565 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit APT56_09570 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_09570 IPR042110 Adenylosuccinate synthetase, domain 2 APT56_09570 IPR042111 Adenylosuccinate synthetase, domain 3 APT56_09570 IPR001114 Adenylosuccinate synthetase APT56_09570 IPR033128 Adenylosuccinate synthase, active site APT56_09570 IPR042109 Adenylosuccinate synthetase, domain 1 APT56_09570 IPR018220 Adenylosuccinate synthase, GTP-binding site APT56_09575 IPR000836 Phosphoribosyltransferase domain APT56_09575 IPR029057 Phosphoribosyltransferase-like APT56_09575 IPR023747 Xanthine-guanine phosphoribosyltransferase APT56_09580 IPR001911 Ribosomal protein S21 APT56_09580 IPR018278 Ribosomal protein S21, conserved site APT56_09580 IPR038380 Ribosomal protein S21 superfamily APT56_09585 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal APT56_09585 IPR013264 DNA primase, catalytic core, N-terminal APT56_09585 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily APT56_09585 IPR019475 DNA primase, DnaB-helicase binding domain APT56_09585 IPR006295 DNA primase, DnaG APT56_09585 IPR013173 DNA primase DnaG, DnaB-binding domain APT56_09585 IPR036977 DNA Primase, CHC2-type zinc finger APT56_09585 IPR030846 DNA primase DnaG, bacteria APT56_09585 IPR006171 TOPRIM domain APT56_09585 IPR002694 Zinc finger, CHC2-type APT56_09585 IPR034151 Bacterial DnaG primase, TOPRIM domain APT56_09590 IPR007624 RNA polymerase sigma-70 region 3 APT56_09590 IPR042189 Sigma-70 factor, region 1.1 superfamily APT56_09590 IPR013325 RNA polymerase sigma factor, region 2 APT56_09590 IPR007127 RNA polymerase sigma factor 70, region 1.1 APT56_09590 IPR007631 RNA polymerase sigma factor 70, non-essential domain APT56_09590 IPR013324 RNA polymerase sigma factor, region 3/4-like APT56_09590 IPR012760 RNA polymerase sigma factor RpoD, C-terminal APT56_09590 IPR007630 RNA polymerase sigma-70 region 4 APT56_09590 IPR007627 RNA polymerase sigma-70 region 2 APT56_09590 IPR014284 RNA polymerase sigma-70 like domain APT56_09590 IPR028630 RNA polymerase sigma factor RpoD APT56_09590 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_09590 IPR000943 RNA polymerase sigma-70 APT56_09590 IPR009042 RNA polymerase sigma-70 region 1.2 APT56_09605 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain APT56_09605 IPR001296 Glycosyl transferase, family 1 APT56_09605 IPR023881 N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA APT56_09620 IPR036514 SGNH hydrolase superfamily APT56_09620 IPR002656 Acyltransferase 3 APT56_09650 IPR004846 Type II/III secretion system APT56_09650 IPR007055 BON domain APT56_09650 IPR014004 Transport-associated and nodulation domain, bacteria APT56_09650 IPR001775 GspD/PilQ family APT56_09650 IPR032789 Pilus formation protein, N-terminal APT56_09655 IPR001482 Type II/IV secretion system protein APT56_09655 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_09655 IPR022399 Helicase/secretion neighbourhood ATPase APT56_09675 IPR005280 Homoserine kinase, type II APT56_09675 IPR002575 Aminoglycoside phosphotransferase APT56_09675 IPR011009 Protein kinase-like domain superfamily APT56_09680 IPR004653 tRNA-dihydrouridine(20/20a) synthase APT56_09680 IPR035587 DUS-like, FMN-binding domain APT56_09680 IPR013785 Aldolase-type TIM barrel APT56_09680 IPR001269 tRNA-dihydrouridine synthase APT56_09680 IPR018517 tRNA-dihydrouridine synthase, conserved site APT56_09690 IPR023679 Uncharacterised protein family UPF0761, bacterial APT56_09690 IPR017039 Virulence factor BrkB APT56_09700 IPR003846 Protein adenylyltransferase SelO APT56_09705 IPR011006 CheY-like superfamily APT56_09705 IPR001867 OmpR/PhoB-type DNA-binding domain APT56_09705 IPR001789 Signal transduction response regulator, receiver domain APT56_09705 IPR039420 Transcriptional regulatory protein WalR-like APT56_09705 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_09710 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily APT56_09710 IPR003594 Histidine kinase/HSP90-like ATPase APT56_09710 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APT56_09710 IPR005467 Histidine kinase domain APT56_09710 IPR004358 Signal transduction histidine kinase-related protein, C-terminal APT56_09710 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain APT56_09720 IPR005330 MHYT domain APT56_09720 IPR001633 EAL domain APT56_09720 IPR035919 EAL domain superfamily APT56_09720 IPR029787 Nucleotide cyclase APT56_09720 IPR000160 GGDEF domain APT56_09725 IPR000453 Chorismate synthase APT56_09725 IPR035904 Chorismate synthase AroC superfamily APT56_09725 IPR020541 Chorismate synthase, conserved site APT56_09730 IPR001915 Peptidase M48 APT56_09730 IPR011990 Tetratricopeptide-like helical domain superfamily APT56_09730 IPR030873 Beta-barrel assembly-enhancing protease APT56_09755 IPR001789 Signal transduction response regulator, receiver domain APT56_09755 IPR000792 Transcription regulator LuxR, C-terminal APT56_09755 IPR011006 CheY-like superfamily APT56_09755 IPR016032 Signal transduction response regulator, C-terminal effector APT56_09760 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APT56_09760 IPR010129 Type I secretion membrane fusion protein, HlyD family APT56_09765 IPR010132 ATPase, type I secretion system, HlyB APT56_09765 IPR036640 ABC transporter type 1, transmembrane domain superfamily APT56_09765 IPR039421 Type I protein exporter APT56_09765 IPR039395 Peptidase C39-like A APT56_09765 IPR005074 Peptidase C39, bacteriocin processing APT56_09765 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_09765 IPR011527 ABC transporter type 1, transmembrane domain APT56_09765 IPR017871 ABC transporter, conserved site APT56_09765 IPR003593 AAA+ ATPase domain APT56_09765 IPR003439 ABC transporter-like APT56_09775 IPR003423 Outer membrane efflux protein APT56_09775 IPR010130 Type I secretion outer membrane protein, TolC APT56_09780 IPR033941 3-Isopropylmalate dehydratase, catalytic domain APT56_09780 IPR036008 Aconitase, iron-sulfur domain APT56_09780 IPR018136 Aconitase family, 4Fe-4S cluster binding site APT56_09780 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain APT56_09780 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 APT56_09780 IPR004430 3-isopropylmalate dehydratase, large subunit APT56_09785 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain APT56_09785 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel APT56_09785 IPR004431 3-isopropylmalate dehydratase, small subunit APT56_09785 IPR033940 3-isopropylmalate dehydratase, swivel domain APT56_09790 IPR004429 Isopropylmalate dehydrogenase APT56_09790 IPR024084 Isopropylmalate dehydrogenase-like domain APT56_09790 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site APT56_09795 IPR012080 Aspartate-semialdehyde dehydrogenase APT56_09795 IPR012280 Semialdehyde dehydrogenase, dimerisation domain APT56_09795 IPR000534 Semialdehyde dehydrogenase, NAD-binding APT56_09795 IPR036291 NAD(P)-binding domain superfamily APT56_09795 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type APT56_09795 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site APT56_09805 IPR001406 Pseudouridine synthase I, TruA APT56_09805 IPR020103 Pseudouridine synthase, catalytic domain superfamily APT56_09805 IPR020095 Pseudouridine synthase I, TruA, C-terminal APT56_09805 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain APT56_09810 IPR026289 Solute binding protein, TakP-like APT56_09810 IPR041722 Alpha-keto acid binding periplasmic protein APT56_09810 IPR006311 Twin-arginine translocation pathway, signal sequence APT56_09810 IPR018389 TRAP transporter solute receptor DctP/TeaA APT56_09810 IPR038404 TRAP transporter solute receptor DctP superfamily APT56_09815 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) APT56_09815 IPR011060 Ribulose-phosphate binding barrel APT56_09815 IPR013785 Aldolase-type TIM barrel APT56_09840 IPR006675 HDIG domain APT56_09840 IPR003607 HD/PDEase domain APT56_09840 IPR006674 HD domain APT56_09860 IPR036514 SGNH hydrolase superfamily APT56_09860 IPR013830 SGNH hydrolase-type esterase domain APT56_09860 IPR029058 Alpha/Beta hydrolase fold APT56_09860 IPR013094 Alpha/beta hydrolase fold-3 APT56_09865 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site APT56_09865 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase APT56_09865 IPR037237 IlvD/EDD, N-terminal domain APT56_09865 IPR042096 Dihydroxy-acid dehydratase, C-terminal APT56_09870 IPR004682 TRAP transporter solute receptor, DctP family APT56_09870 IPR018389 TRAP transporter solute receptor DctP/TeaA APT56_09870 IPR038404 TRAP transporter solute receptor DctP superfamily APT56_09875 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit APT56_09875 IPR004681 TRAP transporter large membrane protein DctM APT56_09880 IPR007387 TRAP transporter, small membrane protein DctQ APT56_09885 IPR028082 Periplasmic binding protein-like I APT56_09885 IPR001761 Periplasmic binding protein/LacI sugar binding domain APT56_09885 IPR010982 Lambda repressor-like, DNA-binding domain superfamily APT56_09885 IPR000843 LacI-type HTH domain APT56_09890 IPR004626 RarD protein APT56_09890 IPR000620 EamA domain APT56_09895 IPR000286 Histone deacetylase family APT56_09895 IPR023801 Histone deacetylase domain APT56_09895 IPR037138 Histone deacetylase domain superfamily APT56_09895 IPR023696 Ureohydrolase domain superfamily APT56_09900 IPR013096 Cupin 2, conserved barrel APT56_09900 IPR011051 RmlC-like cupin domain superfamily APT56_09900 IPR014710 RmlC-like jelly roll fold APT56_09905 IPR003593 AAA+ ATPase domain APT56_09905 IPR003439 ABC transporter-like APT56_09905 IPR017871 ABC transporter, conserved site APT56_09905 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_09905 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal APT56_09910 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_09910 IPR035906 MetI-like superfamily APT56_09910 IPR025966 Oligopeptide transport permease C-like, N-terminal domain APT56_09915 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_09915 IPR035906 MetI-like superfamily APT56_09920 IPR030678 Peptide/nickel binding protein, MppA-type APT56_09920 IPR000914 Solute-binding protein family 5 domain APT56_09920 IPR023765 Solute-binding protein family 5, conserved site APT56_09920 IPR039424 Solute-binding protein family 5 APT56_09925 IPR016161 Aldehyde/histidinol dehydrogenase APT56_09925 IPR015590 Aldehyde dehydrogenase domain APT56_09925 IPR016162 Aldehyde dehydrogenase, N-terminal APT56_09925 IPR016160 Aldehyde dehydrogenase, cysteine active site APT56_09925 IPR016163 Aldehyde dehydrogenase, C-terminal APT56_09925 IPR029510 Aldehyde dehydrogenase, glutamic acid active site APT56_09930 IPR036264 Bacterial exopeptidase dimerisation domain APT56_09930 IPR011650 Peptidase M20, dimerisation domain APT56_09930 IPR010158 Amidase, carbamoylase-type APT56_09930 IPR002933 Peptidase M20 APT56_09935 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding APT56_09935 IPR012846 Acetolactate synthase, large subunit, biosynthetic APT56_09935 IPR012000 Thiamine pyrophosphate enzyme, central domain APT56_09935 IPR029061 Thiamin diphosphate-binding fold APT56_09935 IPR029035 DHS-like NAD/FAD-binding domain superfamily APT56_09935 IPR039368 Acetolactate synthase large subunit, TPP binding domain APT56_09935 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain APT56_09940 IPR011711 GntR, C-terminal APT56_09940 IPR008920 Transcription regulator FadR/GntR, C-terminal APT56_09940 IPR000524 Transcription regulator HTH, GntR APT56_09940 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_09940 IPR036390 Winged helix DNA-binding domain superfamily APT56_09955 IPR006638 Elp3/MiaB/NifB APT56_09955 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN APT56_09955 IPR007197 Radical SAM APT56_09955 IPR023404 Radical SAM, alpha/beta horseshoe APT56_09955 IPR034505 Anaerobic coproporphyrinogen-III oxidase APT56_09955 IPR010723 HemN, C-terminal APT56_09960 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_09960 IPR001789 Signal transduction response regulator, receiver domain APT56_09960 IPR030864 Transcriptional regulatory protein RcsB APT56_09960 IPR011006 CheY-like superfamily APT56_09960 IPR016032 Signal transduction response regulator, C-terminal effector APT56_09960 IPR000792 Transcription regulator LuxR, C-terminal APT56_09965 IPR005913 dTDP-4-dehydrorhamnose reductase family APT56_09965 IPR029903 RmlD-like substrate binding domain APT56_09965 IPR036291 NAD(P)-binding domain superfamily APT56_09970 IPR012676 TGS-like APT56_09970 IPR012947 Threonyl/alanyl tRNA synthetase, SAD APT56_09970 IPR036621 Anticodon-binding domain superfamily APT56_09970 IPR004095 TGS APT56_09970 IPR006195 Aminoacyl-tRNA synthetase, class II APT56_09970 IPR012675 Beta-grasp domain superfamily APT56_09970 IPR033728 Threonine-tRNA ligase catalytic core domain APT56_09970 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily APT56_09970 IPR002320 Threonine-tRNA ligase, class IIa APT56_09970 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) APT56_09970 IPR004154 Anticodon-binding APT56_09975 IPR019815 Translation initiation factor 3, C-terminal APT56_09975 IPR019813 Translation initiation factor 3, conserved site APT56_09975 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily APT56_09975 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily APT56_09975 IPR019814 Translation initiation factor 3, N-terminal APT56_09975 IPR001288 Translation initiation factor 3 APT56_09980 IPR013815 ATP-grasp fold, subdomain 1 APT56_09980 IPR011761 ATP-grasp fold APT56_09980 IPR016185 Pre-ATP-grasp domain superfamily APT56_09980 IPR006284 Glutathione synthetase, prokaryotic APT56_09980 IPR004215 Prokaryotic glutathione synthetase, N-terminal APT56_09980 IPR004218 Prokaryotic glutathione synthetase, ATP-binding APT56_09990 IPR000032 Phosphocarrier protein HPr-like APT56_09990 IPR035895 HPr-like superfamily APT56_09990 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site APT56_09990 IPR002114 Phosphotransferase system, HPr serine phosphorylation site APT56_09995 IPR008279 PEP-utilising enzyme, mobile domain APT56_09995 IPR018274 PEP-utilising enzyme, active site APT56_09995 IPR024692 Phosphotransferase system, enzyme I APT56_09995 IPR000121 PEP-utilising enzyme, C-terminal APT56_09995 IPR023151 PEP-utilising enzyme, conserved site APT56_09995 IPR036637 Phosphohistidine domain superfamily APT56_09995 IPR006318 Phosphotransferase system, enzyme I-like APT56_09995 IPR008731 Phosphotransferase system, enzyme I N-terminal APT56_09995 IPR036618 PtsI, HPr-binding domain superfamily APT56_09995 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily APT56_09995 IPR040442 Pyruvate kinase-like domain superfamily APT56_10000 IPR029020 Ammonium/urea transporter APT56_10000 IPR018047 Ammonium transporter, conserved site APT56_10000 IPR024041 Ammonium transporter AmtB-like domain APT56_10000 IPR001905 Ammonium transporter APT56_10005 IPR011322 Nitrogen regulatory PII-like, alpha/beta APT56_10005 IPR002187 Nitrogen regulatory protein PII APT56_10005 IPR002332 Nitrogen regulatory protein P-II, urydylation site APT56_10005 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal APT56_10005 IPR017918 Nitrogen regulatory protein PII, conserved site APT56_10015 IPR007475 Ubiquinone biosynthesis accessory factor UbiK APT56_10020 IPR025158 Mg chelatase-related protein, C-terminal domain APT56_10020 IPR004482 Mg chelatase-related protein APT56_10020 IPR003593 AAA+ ATPase domain APT56_10020 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_10020 IPR020568 Ribosomal protein S5 domain 2-type fold APT56_10020 IPR000523 Magnesium chelatase ChlI domain APT56_10020 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 APT56_10025 IPR018265 Ribosomal protein L35, conserved site APT56_10025 IPR001706 Ribosomal protein L35, non-mitochondrial APT56_10025 IPR037229 Ribosomal protein L35 superfamily APT56_10025 IPR021137 Ribosomal protein L35 APT56_10030 IPR005813 Ribosomal protein L20 APT56_10030 IPR035566 Ribosomal protein L20, C-terminal APT56_10035 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm APT56_10035 IPR006195 Aminoacyl-tRNA synthetase, class II APT56_10035 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit APT56_10035 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal APT56_10035 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial APT56_10035 IPR002319 Phenylalanyl-tRNA synthetase APT56_10040 IPR005146 B3/B4 tRNA-binding domain APT56_10040 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain APT56_10040 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 APT56_10040 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit APT56_10040 IPR012340 Nucleic acid-binding, OB-fold APT56_10040 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily APT56_10040 IPR005147 tRNA synthetase, B5-domain APT56_10040 IPR005121 Ferrodoxin-fold anticodon-binding domain APT56_10040 IPR009061 Putative DNA-binding domain superfamily APT56_10040 IPR002547 tRNA-binding domain APT56_10040 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain APT56_10045 IPR000119 Histone-like DNA-binding protein APT56_10045 IPR020816 Histone-like DNA-binding protein, conserved site APT56_10045 IPR005684 Integration host factor, alpha subunit APT56_10045 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily APT56_10065 IPR003115 ParB/Sulfiredoxin APT56_10065 IPR004437 ParB/RepB/Spo0J partition protein APT56_10065 IPR036086 ParB/Sulfiredoxin superfamily APT56_10065 IPR041468 ParB/Spo0J, HTH domain APT56_10075 IPR018330 RecT family APT56_10075 IPR004590 DNA single-strand annealing protein RecT APT56_10080 IPR011604 Exonuclease, phage-type/RecB, C-terminal APT56_10080 IPR017482 Putative phage-type endonuclease APT56_10080 IPR019080 YqaJ viral recombinase APT56_10080 IPR011335 Restriction endonuclease type II-like APT56_10125 IPR036614 Holliday junction resolvase RusA-like superfamily APT56_10125 IPR008822 Holliday junction resolvase RusA-like APT56_10155 IPR006528 Phage head morphogenesis domain APT56_10155 IPR000836 Phosphoribosyltransferase domain APT56_10325 IPR003719 Phenazine biosynthesis PhzF protein APT56_10330 IPR023072 Acetyltransferase, YpeA APT56_10330 IPR016181 Acyl-CoA N-acyltransferase APT56_10330 IPR000182 GNAT domain APT56_10350 IPR005064 Bordetella uptake gene APT56_10350 IPR042100 Bordetella uptake gene, domain 1 APT56_10375 IPR036390 Winged helix DNA-binding domain superfamily APT56_10375 IPR011008 Dimeric alpha-beta barrel APT56_10375 IPR000485 AsnC-type HTH domain APT56_10375 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_10375 IPR019885 Transcription regulator HTH, AsnC-type, conserved site APT56_10375 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain APT56_10375 IPR019888 Transcription regulator AsnC-type APT56_10405 IPR000847 Transcription regulator HTH, LysR APT56_10405 IPR005119 LysR, substrate-binding APT56_10405 IPR036390 Winged helix DNA-binding domain superfamily APT56_10405 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_10410 IPR005064 Bordetella uptake gene APT56_10410 IPR042100 Bordetella uptake gene, domain 1 APT56_10425 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain APT56_10425 IPR036914 Methylglyoxal synthase-like domain superfamily APT56_10425 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain APT56_10425 IPR016185 Pre-ATP-grasp domain superfamily APT56_10425 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain APT56_10425 IPR011761 ATP-grasp fold APT56_10425 IPR006275 Carbamoyl-phosphate synthase, large subunit APT56_10425 IPR011607 Methylglyoxal synthase-like domain APT56_10425 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain APT56_10425 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily APT56_10435 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_10435 IPR017871 ABC transporter, conserved site APT56_10435 IPR003593 AAA+ ATPase domain APT56_10435 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB APT56_10435 IPR003439 ABC transporter-like APT56_10450 IPR036390 Winged helix DNA-binding domain superfamily APT56_10450 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_10450 IPR000847 Transcription regulator HTH, LysR APT56_10450 IPR005119 LysR, substrate-binding APT56_10455 IPR016833 Putative sodium bile acid cotransporter APT56_10455 IPR038770 Sodium/solute symporter superfamily APT56_10465 IPR039421 Type I protein exporter APT56_10465 IPR003593 AAA+ ATPase domain APT56_10465 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_10465 IPR017871 ABC transporter, conserved site APT56_10465 IPR003439 ABC transporter-like APT56_10465 IPR036640 ABC transporter type 1, transmembrane domain superfamily APT56_10465 IPR011527 ABC transporter type 1, transmembrane domain APT56_10470 IPR018170 Aldo/keto reductase, conserved site APT56_10470 IPR020471 Aldo/keto reductase APT56_10470 IPR023210 NADP-dependent oxidoreductase domain APT56_10470 IPR036812 NADP-dependent oxidoreductase domain superfamily APT56_10485 IPR029052 Metallo-dependent phosphatase-like APT56_10485 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase APT56_10485 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type APT56_10490 IPR031376 Penicillin-binding protein, OB-like domain APT56_10490 IPR001460 Penicillin-binding protein, transpeptidase APT56_10490 IPR012338 Beta-lactamase/transpeptidase-like APT56_10490 IPR001264 Glycosyl transferase, family 51 APT56_10490 IPR036950 Penicillin binding protein transglycosylase domain APT56_10490 IPR023346 Lysozyme-like domain superfamily APT56_10500 IPR011701 Major facilitator superfamily APT56_10500 IPR020846 Major facilitator superfamily domain APT56_10500 IPR036259 MFS transporter superfamily APT56_10510 IPR001173 Glycosyltransferase 2-like APT56_10510 IPR029044 Nucleotide-diphospho-sugar transferases APT56_10510 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA APT56_10515 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel APT56_10515 IPR002509 NodB homology domain APT56_10515 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB APT56_10515 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal APT56_10520 IPR019734 Tetratricopeptide repeat APT56_10520 IPR013026 Tetratricopeptide repeat-containing domain APT56_10520 IPR011990 Tetratricopeptide-like helical domain superfamily APT56_10520 IPR023870 Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA APT56_10525 IPR033416 Periplasmic sensor domain CHASE7 APT56_10525 IPR000160 GGDEF domain APT56_10525 IPR029787 Nucleotide cyclase APT56_10530 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain APT56_10530 IPR029058 Alpha/Beta hydrolase fold APT56_10530 IPR011042 Six-bladed beta-propeller, TolB-like APT56_10545 IPR001126 UmuC domain APT56_10545 IPR017961 DNA polymerase, Y-family, little finger domain APT56_10545 IPR022880 DNA polymerase IV APT56_10545 IPR024728 DNA polymerase type-Y, HhH motif APT56_10545 IPR036775 DNA polymerase, Y-family, little finger domain superfamily APT56_10550 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 APT56_10550 IPR042184 YqeY/Aim41, N-terminal domain APT56_10550 IPR019004 Uncharacterised protein YqeY/Aim41 APT56_10550 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like APT56_10560 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain APT56_10560 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 APT56_10560 IPR000794 Beta-ketoacyl synthase APT56_10560 IPR018201 Beta-ketoacyl synthase, active site APT56_10560 IPR014031 Beta-ketoacyl synthase, C-terminal APT56_10560 IPR014030 Beta-ketoacyl synthase, N-terminal APT56_10560 IPR016039 Thiolase-like APT56_10565 IPR002347 Short-chain dehydrogenase/reductase SDR APT56_10565 IPR036291 NAD(P)-binding domain superfamily APT56_10565 IPR011285 3-oxoacyl-(acyl-carrier-protein) reductase, putative APT56_10575 IPR000794 Beta-ketoacyl synthase APT56_10575 IPR018201 Beta-ketoacyl synthase, active site APT56_10575 IPR016039 Thiolase-like APT56_10575 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain APT56_10575 IPR014030 Beta-ketoacyl synthase, N-terminal APT56_10575 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 APT56_10575 IPR014031 Beta-ketoacyl synthase, C-terminal APT56_10615 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ APT56_10615 IPR029069 HotDog domain superfamily APT56_10615 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ APT56_10625 IPR036736 ACP-like superfamily APT56_10625 IPR003231 Acyl carrier protein (ACP) APT56_10625 IPR009081 Phosphopantetheine binding ACP domain APT56_10630 IPR036736 ACP-like superfamily APT56_10630 IPR003231 Acyl carrier protein (ACP) APT56_10630 IPR009081 Phosphopantetheine binding ACP domain APT56_10630 IPR006162 Phosphopantetheine attachment site APT56_10650 IPR009050 Globin-like superfamily APT56_10650 IPR012292 Globin/Protoglobin APT56_10650 IPR023950 Flavohemoprotein APT56_10650 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain APT56_10650 IPR017938 Riboflavin synthase-like beta-barrel APT56_10650 IPR017927 FAD-binding domain, ferredoxin reductase-type APT56_10650 IPR000971 Globin APT56_10650 IPR001433 Oxidoreductase FAD/NAD(P)-binding APT56_10650 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain APT56_10655 IPR000944 Transcription regulator Rrf2-type APT56_10655 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_10655 IPR036390 Winged helix DNA-binding domain superfamily APT56_10655 IPR023761 Transcriptional repressor HTH, NsrR APT56_10660 IPR006076 FAD dependent oxidoreductase APT56_10660 IPR036188 FAD/NAD(P)-binding domain superfamily APT56_10660 IPR023080 D-amino acid dehydrogenase DadA APT56_10665 IPR000620 EamA domain APT56_10670 IPR008219 Proline dehydrogenase, bacteria and archaea APT56_10670 IPR029041 FAD-linked oxidoreductase-like APT56_10670 IPR002872 Proline dehydrogenase domain APT56_10670 IPR015659 Proline oxidase family APT56_10690 IPR000847 Transcription regulator HTH, LysR APT56_10690 IPR036390 Winged helix DNA-binding domain superfamily APT56_10690 IPR005119 LysR, substrate-binding APT56_10690 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_10695 IPR036259 MFS transporter superfamily APT56_10695 IPR020846 Major facilitator superfamily domain APT56_10695 IPR011701 Major facilitator superfamily APT56_10705 IPR036390 Winged helix DNA-binding domain superfamily APT56_10705 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_10705 IPR000847 Transcription regulator HTH, LysR APT56_10705 IPR005119 LysR, substrate-binding APT56_10710 IPR010987 Glutathione S-transferase, C-terminal-like APT56_10710 IPR040079 Glutathione Transferase family APT56_10710 IPR004045 Glutathione S-transferase, N-terminal APT56_10710 IPR036249 Thioredoxin-like superfamily APT56_10710 IPR036282 Glutathione S-transferase, C-terminal domain superfamily APT56_10720 IPR011991 ArsR-like helix-turn-helix domain APT56_10720 IPR002577 Helix-turn-helix, HxlR type APT56_10720 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_10720 IPR036390 Winged helix DNA-binding domain superfamily APT56_10725 IPR036259 MFS transporter superfamily APT56_10725 IPR020846 Major facilitator superfamily domain APT56_10725 IPR011701 Major facilitator superfamily APT56_10730 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_10730 IPR015859 ABC transporter, taurine import, TauD APT56_10730 IPR017871 ABC transporter, conserved site APT56_10730 IPR003439 ABC transporter-like APT56_10730 IPR003593 AAA+ ATPase domain APT56_10735 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_10735 IPR035906 MetI-like superfamily APT56_10750 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal APT56_10750 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal APT56_10750 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal APT56_10750 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain APT56_10750 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain APT56_10750 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily APT56_10750 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily APT56_10755 IPR025110 AMP-binding enzyme, C-terminal domain APT56_10755 IPR020845 AMP-binding, conserved site APT56_10755 IPR000873 AMP-dependent synthetase/ligase APT56_10755 IPR042099 AMP-dependent synthetase-like superfamily APT56_10765 IPR033134 Asp/Glu racemase, active site 2 APT56_10765 IPR001920 Asp/Glu racemase APT56_10765 IPR004380 Aspartate racemase APT56_10765 IPR015942 Asp/Glu/hydantoin racemase APT56_10775 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal APT56_10775 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II APT56_10775 IPR041621 Pyruvate dehydrogenase E1 component, middle domain APT56_10775 IPR029061 Thiamin diphosphate-binding fold APT56_10775 IPR005474 Transketolase, N-terminal APT56_10775 IPR004660 Pyruvate dehydrogenase E1 component APT56_10780 IPR001123 Amino acid exporter protein, LeuE-type APT56_10780 IPR004778 Homoserine/Threonine efflux protein APT56_10785 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain APT56_10785 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily APT56_10785 IPR023753 FAD/NAD(P)-binding domain APT56_10785 IPR036188 FAD/NAD(P)-binding domain superfamily APT56_10785 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I APT56_10785 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site APT56_10795 IPR001123 Amino acid exporter protein, LeuE-type APT56_10795 IPR004778 Homoserine/Threonine efflux protein APT56_10800 IPR015424 Pyridoxal phosphate-dependent transferase APT56_10800 IPR036390 Winged helix DNA-binding domain superfamily APT56_10800 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_10800 IPR000524 Transcription regulator HTH, GntR APT56_10800 IPR004839 Aminotransferase, class I/classII APT56_10800 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APT56_10810 IPR000620 EamA domain APT56_10815 IPR000620 EamA domain APT56_10825 IPR036264 Bacterial exopeptidase dimerisation domain APT56_10825 IPR002933 Peptidase M20 APT56_10825 IPR011650 Peptidase M20, dimerisation domain APT56_10825 IPR010158 Amidase, carbamoylase-type APT56_10830 IPR002528 Multi antimicrobial extrusion protein APT56_10835 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site APT56_10835 IPR001753 Enoyl-CoA hydratase/isomerase APT56_10835 IPR014748 Enoyl-CoA hydratase, C-terminal APT56_10835 IPR029045 ClpP/crotonase-like domain superfamily APT56_10840 IPR002347 Short-chain dehydrogenase/reductase SDR APT56_10840 IPR036291 NAD(P)-binding domain superfamily APT56_10850 IPR042099 AMP-dependent synthetase-like superfamily APT56_10850 IPR000873 AMP-dependent synthetase/ligase APT56_10850 IPR020845 AMP-binding, conserved site APT56_10850 IPR025110 AMP-binding enzyme, C-terminal domain APT56_10855 IPR018091 Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site APT56_10855 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal APT56_10855 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising APT56_10855 IPR035077 Phosphoenolpyruvate carboxykinase, C-terminal P-loop domain APT56_10855 IPR035078 Phosphoenolpyruvate carboxykinase, GTP-utilising, N-terminal APT56_10855 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal APT56_10865 IPR036291 NAD(P)-binding domain superfamily APT56_10865 IPR020904 Short-chain dehydrogenase/reductase, conserved site APT56_10865 IPR002347 Short-chain dehydrogenase/reductase SDR APT56_10870 IPR036188 FAD/NAD(P)-binding domain superfamily APT56_10870 IPR041654 Styrene monooxygenase StyA, putative substrate binding domain APT56_10875 IPR036390 Winged helix DNA-binding domain superfamily APT56_10875 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_10875 IPR012349 FMN-binding split barrel APT56_10875 IPR002563 Flavin reductase like domain APT56_10880 IPR015899 UDP-galactopyranose mutase, C-terminal APT56_10880 IPR004379 UDP-galactopyranose mutase APT56_10900 IPR018060 DNA binding HTH domain, AraC-type APT56_10900 IPR009057 Homeobox-like domain superfamily APT56_10900 IPR018062 HTH domain AraC-type, conserved site APT56_10905 IPR005064 Bordetella uptake gene APT56_10905 IPR042100 Bordetella uptake gene, domain 1 APT56_10910 IPR002912 ACT domain APT56_10910 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain APT56_10910 IPR036291 NAD(P)-binding domain superfamily APT56_10910 IPR006236 D-3-phosphoglycerate dehydrogenase APT56_10910 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain APT56_10910 IPR029009 Allosteric substrate binding domain superfamily APT56_10910 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 APT56_10910 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site APT56_10915 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein APT56_10915 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily APT56_10925 IPR037396 FMN hydroxy acid dehydrogenase domain APT56_10925 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent APT56_10925 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site APT56_10925 IPR000262 FMN-dependent dehydrogenase APT56_10925 IPR013785 Aldolase-type TIM barrel APT56_10935 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site APT56_10935 IPR020843 Polyketide synthase, enoylreductase domain APT56_10935 IPR011032 GroES-like superfamily APT56_10935 IPR013154 Alcohol dehydrogenase, N-terminal APT56_10935 IPR036291 NAD(P)-binding domain superfamily APT56_10935 IPR013149 Alcohol dehydrogenase, C-terminal APT56_10945 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain APT56_10945 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain APT56_10945 IPR036291 NAD(P)-binding domain superfamily APT56_10955 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APT56_10955 IPR015424 Pyridoxal phosphate-dependent transferase APT56_10955 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APT56_10955 IPR005814 Aminotransferase class-III APT56_10960 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal APT56_10960 IPR017871 ABC transporter, conserved site APT56_10960 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_10960 IPR003439 ABC transporter-like APT56_10960 IPR003593 AAA+ ATPase domain APT56_10965 IPR025966 Oligopeptide transport permease C-like, N-terminal domain APT56_10965 IPR035906 MetI-like superfamily APT56_10965 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_10970 IPR035906 MetI-like superfamily APT56_10970 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_10975 IPR030678 Peptide/nickel binding protein, MppA-type APT56_10975 IPR039424 Solute-binding protein family 5 APT56_10975 IPR000914 Solute-binding protein family 5 domain APT56_10975 IPR023765 Solute-binding protein family 5, conserved site APT56_10985 IPR000847 Transcription regulator HTH, LysR APT56_10985 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_10985 IPR036390 Winged helix DNA-binding domain superfamily APT56_10985 IPR005119 LysR, substrate-binding APT56_10990 IPR000014 PAS domain APT56_10990 IPR013655 PAS fold-3 APT56_10990 IPR013656 PAS fold-4 APT56_10990 IPR035965 PAS domain superfamily APT56_10990 IPR001633 EAL domain APT56_10990 IPR035919 EAL domain superfamily APT56_10990 IPR000160 GGDEF domain APT56_10990 IPR007895 MASE1 APT56_10990 IPR000700 PAS-associated, C-terminal APT56_10990 IPR029787 Nucleotide cyclase APT56_10990 IPR001610 PAC motif APT56_10995 IPR012093 Pirin APT56_10995 IPR003829 Pirin, N-terminal domain APT56_10995 IPR011051 RmlC-like cupin domain superfamily APT56_10995 IPR014710 RmlC-like jelly roll fold APT56_10995 IPR008778 Pirin, C-terminal domain APT56_11010 IPR005616 CcmH/CycL/Ccl2/NrfF family APT56_11010 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily APT56_11015 IPR036249 Thioredoxin-like superfamily APT56_11015 IPR013766 Thioredoxin domain APT56_11015 IPR017937 Thioredoxin, conserved site APT56_11015 IPR013740 Redoxin APT56_11015 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE APT56_11020 IPR003568 Cytochrome c-type biogenesis protein CcmF APT56_11020 IPR003567 Cytochrome c-type biogenesis protein APT56_11020 IPR002541 Cytochrome c assembly protein APT56_11020 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal APT56_11025 IPR004329 CcmE/CycJ protein APT56_11025 IPR036127 CcmE-like superfamily APT56_11035 IPR003557 Cytochrome c-type biogenesis protein CcmC APT56_11035 IPR002541 Cytochrome c assembly protein APT56_11040 IPR003544 Cytochrome c-type biogenesis protein CcmB APT56_11040 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria APT56_11045 IPR003439 ABC transporter-like APT56_11045 IPR005895 ABC transporter, haem export, CcmA APT56_11045 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_11045 IPR017871 ABC transporter, conserved site APT56_11045 IPR003593 AAA+ ATPase domain APT56_11050 IPR011031 Multihaem cytochrome APT56_11050 IPR036280 Multiheme cytochrome superfamily APT56_11050 IPR024717 Denitrification system component NapC/NirT/NrfH APT56_11050 IPR038266 NapC/NirT cytochrome c superfamily APT56_11050 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT APT56_11050 IPR005126 NapC/NirT cytochrome c, N-terminal APT56_11055 IPR041460 Molybdopterin oxidoreductase, N-terminal APT56_11055 IPR006657 Molybdopterin dinucleotide-binding domain APT56_11055 IPR006656 Molybdopterin oxidoreductase APT56_11055 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site APT56_11055 IPR006311 Twin-arginine translocation pathway, signal sequence APT56_11055 IPR011887 Trimethylamine-N-oxide reductase TorA APT56_11055 IPR009010 Aspartate decarboxylase-like domain superfamily APT56_11055 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase APT56_11055 IPR041954 Trimethylamine-N-oxide reductase-like, molybdopterin-binding domain APT56_11060 IPR036386 HscB, C-terminal domain superfamily APT56_11060 IPR036411 TorD-like superfamily APT56_11060 IPR023069 Chaperone TorD APT56_11060 IPR020945 DMSO/Nitrate reductase chaperone APT56_11065 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APT56_11065 IPR006311 Twin-arginine translocation pathway, signal sequence APT56_11065 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APT56_11070 IPR005614 NrfD family APT56_11075 IPR041929 Tetrathionate reductase subunit A, N-terminal APT56_11075 IPR009010 Aspartate decarboxylase-like domain superfamily APT56_11075 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain APT56_11075 IPR006656 Molybdopterin oxidoreductase APT56_11075 IPR037946 Tetrathionate reductase subunit A, MopB domain APT56_11075 IPR006657 Molybdopterin dinucleotide-binding domain APT56_11080 IPR008567 3-keto-5-aminohexanoate cleavage enzyme APT56_11080 IPR013785 Aldolase-type TIM barrel APT56_11085 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding APT56_11085 IPR011967 3-hydroxyacyl-CoA dehydrogenase PaaC APT56_11085 IPR036291 NAD(P)-binding domain superfamily APT56_11085 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site APT56_11085 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal APT56_11085 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily APT56_11085 IPR041040 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain APT56_11090 IPR036390 Winged helix DNA-binding domain superfamily APT56_11090 IPR000847 Transcription regulator HTH, LysR APT56_11090 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_11090 IPR005119 LysR, substrate-binding APT56_11100 IPR042096 Dihydroxy-acid dehydratase, C-terminal APT56_11100 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase APT56_11100 IPR037237 IlvD/EDD, N-terminal domain APT56_11100 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site APT56_11105 IPR005064 Bordetella uptake gene APT56_11105 IPR042100 Bordetella uptake gene, domain 1 APT56_11110 IPR000160 GGDEF domain APT56_11110 IPR000014 PAS domain APT56_11110 IPR001633 EAL domain APT56_11110 IPR035965 PAS domain superfamily APT56_11110 IPR029787 Nucleotide cyclase APT56_11110 IPR035919 EAL domain superfamily APT56_11115 IPR014748 Enoyl-CoA hydratase, C-terminal APT56_11115 IPR001753 Enoyl-CoA hydratase/isomerase APT56_11115 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site APT56_11115 IPR029045 ClpP/crotonase-like domain superfamily APT56_11120 IPR010105 TonB-dependent siderophore receptor APT56_11120 IPR037066 TonB-dependent receptor, plug domain superfamily APT56_11120 IPR039423 TonB-dependent receptor-like APT56_11120 IPR000531 TonB-dependent receptor-like, beta-barrel APT56_11120 IPR012910 TonB-dependent receptor, plug domain APT56_11120 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily APT56_11130 IPR042100 Bordetella uptake gene, domain 1 APT56_11130 IPR005064 Bordetella uptake gene APT56_11135 IPR036390 Winged helix DNA-binding domain superfamily APT56_11135 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_11135 IPR000847 Transcription regulator HTH, LysR APT56_11135 IPR005119 LysR, substrate-binding APT56_11140 IPR003673 CoA-transferase family III APT56_11140 IPR023606 CoA-transferase family III domain superfamily APT56_11145 IPR001753 Enoyl-CoA hydratase/isomerase APT56_11145 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site APT56_11145 IPR029045 ClpP/crotonase-like domain superfamily APT56_11155 IPR038765 Papain-like cysteine peptidase superfamily APT56_11155 IPR024453 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family APT56_11160 IPR002347 Short-chain dehydrogenase/reductase SDR APT56_11160 IPR020904 Short-chain dehydrogenase/reductase, conserved site APT56_11160 IPR036291 NAD(P)-binding domain superfamily APT56_11160 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase APT56_11165 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_11165 IPR000847 Transcription regulator HTH, LysR APT56_11165 IPR036390 Winged helix DNA-binding domain superfamily APT56_11165 IPR005119 LysR, substrate-binding APT56_11170 IPR003474 Gluconate transporter APT56_11175 IPR010917 TonB-dependent receptor, conserved site APT56_11175 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily APT56_11175 IPR000531 TonB-dependent receptor-like, beta-barrel APT56_11175 IPR039423 TonB-dependent receptor-like APT56_11175 IPR037066 TonB-dependent receptor, plug domain superfamily APT56_11175 IPR012910 TonB-dependent receptor, plug domain APT56_11175 IPR011662 Secretin/TonB, short N-terminal domain APT56_11175 IPR010105 TonB-dependent siderophore receptor APT56_11185 IPR011009 Protein kinase-like domain superfamily APT56_11185 IPR006748 Aminoglycoside/hydroxyurea antibiotic resistance kinase APT56_11190 IPR015797 NUDIX hydrolase-like domain superfamily APT56_11190 IPR022925 NADH pyrophosphatase NudC APT56_11190 IPR000086 NUDIX hydrolase domain APT56_11190 IPR020084 NUDIX hydrolase, conserved site APT56_11190 IPR015376 Zinc ribbon, NADH pyrophosphatase APT56_11195 IPR003012 Tetracycline transcriptional regulator, TetR APT56_11195 IPR023772 DNA-binding HTH domain, TetR-type, conserved site APT56_11195 IPR009057 Homeobox-like domain superfamily APT56_11195 IPR001647 DNA-binding HTH domain, TetR-type APT56_11195 IPR004111 Tetracycline repressor TetR, C-terminal APT56_11195 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily APT56_11200 IPR005829 Sugar transporter, conserved site APT56_11200 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG APT56_11200 IPR004734 Multidrug resistance protein APT56_11200 IPR020846 Major facilitator superfamily domain APT56_11200 IPR036259 MFS transporter superfamily APT56_11200 IPR011701 Major facilitator superfamily APT56_11210 IPR036409 Class II aldolase/adducin N-terminal domain superfamily APT56_11210 IPR001303 Class II aldolase/adducin N-terminal APT56_11215 IPR011701 Major facilitator superfamily APT56_11215 IPR004736 MFS transporter, metabolite:H symporter APT56_11215 IPR020846 Major facilitator superfamily domain APT56_11215 IPR005829 Sugar transporter, conserved site APT56_11215 IPR005828 Major facilitator, sugar transporter-like APT56_11215 IPR036259 MFS transporter superfamily APT56_11220 IPR014440 HCCA isomerase/glutathione S-transferase kappa APT56_11220 IPR001853 DSBA-like thioredoxin domain APT56_11220 IPR036249 Thioredoxin-like superfamily APT56_11235 IPR010192 2-succinylbenzoate--CoA ligase APT56_11235 IPR025110 AMP-binding enzyme, C-terminal domain APT56_11235 IPR020845 AMP-binding, conserved site APT56_11235 IPR000873 AMP-dependent synthetase/ligase APT56_11235 IPR042099 AMP-dependent synthetase-like superfamily APT56_11245 IPR005064 Bordetella uptake gene APT56_11245 IPR042100 Bordetella uptake gene, domain 1 APT56_11250 IPR020904 Short-chain dehydrogenase/reductase, conserved site APT56_11250 IPR036291 NAD(P)-binding domain superfamily APT56_11250 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase APT56_11250 IPR002347 Short-chain dehydrogenase/reductase SDR APT56_11260 IPR029062 Class I glutamine amidotransferase-like APT56_11260 IPR002818 DJ-1/PfpI APT56_11265 IPR002818 DJ-1/PfpI APT56_11265 IPR029062 Class I glutamine amidotransferase-like APT56_11270 IPR011991 ArsR-like helix-turn-helix domain APT56_11270 IPR019888 Transcription regulator AsnC-type APT56_11270 IPR011008 Dimeric alpha-beta barrel APT56_11270 IPR036390 Winged helix DNA-binding domain superfamily APT56_11270 IPR019885 Transcription regulator HTH, AsnC-type, conserved site APT56_11270 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain APT56_11270 IPR000485 AsnC-type HTH domain APT56_11270 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_11280 IPR017871 ABC transporter, conserved site APT56_11280 IPR003439 ABC transporter-like APT56_11280 IPR036640 ABC transporter type 1, transmembrane domain superfamily APT56_11280 IPR003593 AAA+ ATPase domain APT56_11280 IPR039421 Type I protein exporter APT56_11280 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_11280 IPR011527 ABC transporter type 1, transmembrane domain APT56_11285 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit APT56_11285 IPR004681 TRAP transporter large membrane protein DctM APT56_11290 IPR004682 TRAP transporter solute receptor, DctP family APT56_11290 IPR018389 TRAP transporter solute receptor DctP/TeaA APT56_11290 IPR038404 TRAP transporter solute receptor DctP superfamily APT56_11305 IPR025110 AMP-binding enzyme, C-terminal domain APT56_11305 IPR020845 AMP-binding, conserved site APT56_11305 IPR000873 AMP-dependent synthetase/ligase APT56_11305 IPR042099 AMP-dependent synthetase-like superfamily APT56_11310 IPR002347 Short-chain dehydrogenase/reductase SDR APT56_11310 IPR036291 NAD(P)-binding domain superfamily APT56_11310 IPR020904 Short-chain dehydrogenase/reductase, conserved site APT56_11325 IPR014047 Chromate transporter, long chain APT56_11325 IPR003370 Chromate transporter APT56_11330 IPR018634 Chromate resistance exported protein APT56_11335 IPR005119 LysR, substrate-binding APT56_11335 IPR036390 Winged helix DNA-binding domain superfamily APT56_11335 IPR000847 Transcription regulator HTH, LysR APT56_11335 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_11340 IPR033813 Penicillin G acylase, C-terminal APT56_11340 IPR023343 Penicillin amidase type, domain 1 APT56_11340 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase APT56_11340 IPR014395 Penicillin/GL-7-ACA/AHL acylase APT56_11340 IPR029055 Nucleophile aminohydrolases, N-terminal APT56_11345 IPR003593 AAA+ ATPase domain APT56_11345 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_11345 IPR011527 ABC transporter type 1, transmembrane domain APT56_11345 IPR036640 ABC transporter type 1, transmembrane domain superfamily APT56_11345 IPR003439 ABC transporter-like APT56_11345 IPR017871 ABC transporter, conserved site APT56_11345 IPR039421 Type I protein exporter APT56_11350 IPR000847 Transcription regulator HTH, LysR APT56_11350 IPR005119 LysR, substrate-binding APT56_11350 IPR036390 Winged helix DNA-binding domain superfamily APT56_11350 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_11360 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 APT56_11360 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal APT56_11360 IPR006222 Aminomethyltransferase, folate-binding domain APT56_11360 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain APT56_11360 IPR032503 FAD dependent oxidoreductase, central domain APT56_11360 IPR036188 FAD/NAD(P)-binding domain superfamily APT56_11360 IPR006076 FAD dependent oxidoreductase APT56_11365 IPR000847 Transcription regulator HTH, LysR APT56_11365 IPR036390 Winged helix DNA-binding domain superfamily APT56_11365 IPR005119 LysR, substrate-binding APT56_11365 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_11375 IPR000847 Transcription regulator HTH, LysR APT56_11375 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_11375 IPR005119 LysR, substrate-binding APT56_11375 IPR036390 Winged helix DNA-binding domain superfamily APT56_11380 IPR011701 Major facilitator superfamily APT56_11380 IPR020846 Major facilitator superfamily domain APT56_11380 IPR036259 MFS transporter superfamily APT56_11385 IPR020846 Major facilitator superfamily domain APT56_11385 IPR011701 Major facilitator superfamily APT56_11385 IPR036259 MFS transporter superfamily APT56_11390 IPR023772 DNA-binding HTH domain, TetR-type, conserved site APT56_11390 IPR009057 Homeobox-like domain superfamily APT56_11390 IPR001647 DNA-binding HTH domain, TetR-type APT56_11390 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily APT56_11390 IPR013572 Transcription regulator MAATS, C-terminal APT56_11400 IPR010982 Lambda repressor-like, DNA-binding domain superfamily APT56_11400 IPR000843 LacI-type HTH domain APT56_11400 IPR006377 Catabolite control protein A APT56_11400 IPR028082 Periplasmic binding protein-like I APT56_11405 IPR020846 Major facilitator superfamily domain APT56_11405 IPR036259 MFS transporter superfamily APT56_11405 IPR011701 Major facilitator superfamily APT56_11405 IPR005829 Sugar transporter, conserved site APT56_11410 IPR000120 Amidase APT56_11410 IPR023631 Amidase signature domain APT56_11410 IPR036928 Amidase signature (AS) superfamily APT56_11410 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit APT56_11410 IPR020556 Amidase, conserved site APT56_11420 IPR002771 Multiple antibiotic resistance (MarC)-related APT56_11440 IPR002781 Transmembrane protein TauE-like APT56_11460 IPR004136 Nitronate monooxygenase APT56_11460 IPR013785 Aldolase-type TIM barrel APT56_11490 IPR002347 Short-chain dehydrogenase/reductase SDR APT56_11490 IPR036291 NAD(P)-binding domain superfamily APT56_11490 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase APT56_11490 IPR020904 Short-chain dehydrogenase/reductase, conserved site APT56_11495 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_11495 IPR000524 Transcription regulator HTH, GntR APT56_11495 IPR008920 Transcription regulator FadR/GntR, C-terminal APT56_11495 IPR011711 GntR, C-terminal APT56_11495 IPR036390 Winged helix DNA-binding domain superfamily APT56_11500 IPR016162 Aldehyde dehydrogenase, N-terminal APT56_11500 IPR016163 Aldehyde dehydrogenase, C-terminal APT56_11500 IPR015590 Aldehyde dehydrogenase domain APT56_11500 IPR016161 Aldehyde/histidinol dehydrogenase APT56_11500 IPR029510 Aldehyde dehydrogenase, glutamic acid active site APT56_11505 IPR026017 Lumazine-binding domain APT56_11505 IPR017938 Riboflavin synthase-like beta-barrel APT56_11505 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily APT56_11505 IPR001783 Lumazine-binding protein APT56_11515 IPR020846 Major facilitator superfamily domain APT56_11515 IPR036259 MFS transporter superfamily APT56_11515 IPR011701 Major facilitator superfamily APT56_11520 IPR005119 LysR, substrate-binding APT56_11520 IPR000847 Transcription regulator HTH, LysR APT56_11520 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_11520 IPR036390 Winged helix DNA-binding domain superfamily APT56_11525 IPR000182 GNAT domain APT56_11525 IPR016181 Acyl-CoA N-acyltransferase APT56_11530 IPR017969 Heavy-metal-associated, conserved site APT56_11530 IPR023299 P-type ATPase, cytoplasmic domain N APT56_11530 IPR027256 P-type ATPase, subfamily IB APT56_11530 IPR023214 HAD superfamily APT56_11530 IPR001757 P-type ATPase APT56_11530 IPR006121 Heavy metal-associated domain, HMA APT56_11530 IPR036163 Heavy metal-associated domain superfamily APT56_11530 IPR036412 HAD-like superfamily APT56_11530 IPR008250 P-type ATPase, A domain superfamily APT56_11530 IPR023298 P-type ATPase, transmembrane domain superfamily APT56_11530 IPR018303 P-type ATPase, phosphorylation site APT56_11535 IPR011791 Cd(II)/Pb(II)-responsive transcriptional regulator APT56_11535 IPR000551 MerR-type HTH domain APT56_11535 IPR009061 Putative DNA-binding domain superfamily APT56_11560 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily APT56_11560 IPR010916 TonB box, conserved site APT56_11560 IPR000531 TonB-dependent receptor-like, beta-barrel APT56_11560 IPR039423 TonB-dependent receptor-like APT56_11560 IPR037066 TonB-dependent receptor, plug domain superfamily APT56_11560 IPR012910 TonB-dependent receptor, plug domain APT56_11560 IPR010105 TonB-dependent siderophore receptor APT56_11560 IPR010917 TonB-dependent receptor, conserved site APT56_11565 IPR001017 Dehydrogenase, E1 component APT56_11565 IPR022593 2-oxoisovalerate dehydrogenase, E1 alpha subunit, N-terminal domain APT56_11565 IPR029061 Thiamin diphosphate-binding fold APT56_11570 IPR005475 Transketolase-like, pyrimidine-binding domain APT56_11570 IPR033248 Transketolase, C-terminal domain APT56_11570 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II APT56_11570 IPR029061 Thiamin diphosphate-binding fold APT56_11575 IPR004167 Peripheral subunit-binding domain APT56_11575 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site APT56_11575 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain APT56_11575 IPR011053 Single hybrid motif APT56_11575 IPR000089 Biotin/lipoyl attachment APT56_11575 IPR036625 E3-binding domain superfamily APT56_11575 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily APT56_11580 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain APT56_11580 IPR006258 Dihydrolipoamide dehydrogenase APT56_11580 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily APT56_11580 IPR036188 FAD/NAD(P)-binding domain superfamily APT56_11580 IPR023753 FAD/NAD(P)-binding domain APT56_11580 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site APT56_11580 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I APT56_11590 IPR020557 Fumarate lyase, conserved site APT56_11590 IPR029419 Argininosuccinate lyase, C-terminal APT56_11590 IPR000362 Fumarate lyase family APT56_11590 IPR009049 Argininosuccinate lyase APT56_11590 IPR022761 Fumarate lyase, N-terminal APT56_11590 IPR008948 L-Aspartase-like APT56_11590 IPR024083 Fumarase/histidase, N-terminal APT56_11595 IPR011066 Mechanosensitive ion channel MscS, C-terminal APT56_11595 IPR010920 LSM domain superfamily APT56_11595 IPR006685 Mechanosensitive ion channel MscS APT56_11595 IPR030192 Miniconductance mechanosensitive channel YbdG APT56_11600 IPR003694 NAD(+) synthetase APT56_11600 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT56_11600 IPR022310 NAD/GMP synthase APT56_11600 IPR041856 Glutamine-dependent NAD+ synthetase, C-terminal APT56_11600 IPR014445 Glutamine-dependent NAD(+) synthetase APT56_11600 IPR003010 Carbon-nitrogen hydrolase APT56_11600 IPR036526 Carbon-nitrogen hydrolase superfamily APT56_11605 IPR002332 Nitrogen regulatory protein P-II, urydylation site APT56_11605 IPR017918 Nitrogen regulatory protein PII, conserved site APT56_11605 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal APT56_11605 IPR002187 Nitrogen regulatory protein PII APT56_11605 IPR011322 Nitrogen regulatory PII-like, alpha/beta APT56_11610 IPR011610 S-adenosyl-L-methionine-dependent methyltransferase, putative APT56_11610 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT56_11610 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP APT56_11610 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp APT56_11625 IPR042094 Type II secretion system F domain superfamily APT56_11625 IPR018076 Type II secretion system F domain APT56_11625 IPR001992 Type II secretion system conserved site APT56_11625 IPR011850 General secretion pathway protein F APT56_11625 IPR003004 GspF/PilC family APT56_11630 IPR004845 Type II secretion system GspD, conserved site APT56_11630 IPR005644 NolW-like APT56_11630 IPR013356 Type II secretion system GspD APT56_11630 IPR001775 GspD/PilQ family APT56_11630 IPR038591 NolW-like superfamily APT56_11630 IPR004846 Type II/III secretion system APT56_11635 IPR013369 Type II secretion system GspE APT56_11635 IPR003593 AAA+ ATPase domain APT56_11635 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_11635 IPR037257 General secretory system II, protein E, N-terminal superfamily APT56_11635 IPR001482 Type II/IV secretion system protein APT56_11665 IPR005628 General secretion pathway protein K APT56_11665 IPR038072 GspK, central domain superfamily APT56_11670 IPR012902 Prokaryotic N-terminal methylation site APT56_11670 IPR010055 Type II secretion system protein J APT56_11675 IPR012902 Prokaryotic N-terminal methylation site APT56_11675 IPR010052 Type II secretion system protein I APT56_11675 IPR003413 Type II secretion system protein I domain APT56_11680 IPR002416 Type II secretion system protein H APT56_11680 IPR022346 General secretion pathway, GspH APT56_11680 IPR012902 Prokaryotic N-terminal methylation site APT56_11685 IPR000983 Bacterial general secretion pathway protein G-type pilin APT56_11685 IPR013545 Type II secretion system protein G APT56_11685 IPR010054 General secretion pathway protein G APT56_11685 IPR012902 Prokaryotic N-terminal methylation site APT56_11710 IPR008475 Bacterial phospholipase C, C-terminal domain APT56_11710 IPR017767 Bacterial phospholipase C, phosphocholine-specific APT56_11710 IPR006311 Twin-arginine translocation pathway, signal sequence APT56_11710 IPR017850 Alkaline-phosphatase-like, core domain superfamily APT56_11710 IPR007312 Phosphoesterase APT56_11715 IPR005119 LysR, substrate-binding APT56_11715 IPR000847 Transcription regulator HTH, LysR APT56_11715 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_11715 IPR036390 Winged helix DNA-binding domain superfamily APT56_11720 IPR029055 Nucleophile aminohydrolases, N-terminal APT56_11725 IPR000914 Solute-binding protein family 5 domain APT56_11725 IPR030678 Peptide/nickel binding protein, MppA-type APT56_11725 IPR039424 Solute-binding protein family 5 APT56_11730 IPR035906 MetI-like superfamily APT56_11730 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_11740 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal APT56_11740 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_11740 IPR003439 ABC transporter-like APT56_11740 IPR003593 AAA+ ATPase domain APT56_11740 IPR017871 ABC transporter, conserved site APT56_11745 IPR011335 Restriction endonuclease type II-like APT56_11745 IPR009822 YaeQ APT56_11745 IPR038590 YaeQ superfamily APT56_11760 IPR020904 Short-chain dehydrogenase/reductase, conserved site APT56_11760 IPR002347 Short-chain dehydrogenase/reductase SDR APT56_11760 IPR036291 NAD(P)-binding domain superfamily APT56_11765 IPR011701 Major facilitator superfamily APT56_11765 IPR020846 Major facilitator superfamily domain APT56_11765 IPR036259 MFS transporter superfamily APT56_11770 IPR007440 Chorismate--pyruvate lyase APT56_11770 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily APT56_11775 IPR002942 RNA-binding S4 domain APT56_11775 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F APT56_11775 IPR006145 Pseudouridine synthase, RsuA/RluA APT56_11775 IPR020103 Pseudouridine synthase, catalytic domain superfamily APT56_11775 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain APT56_11775 IPR036986 RNA-binding S4 domain superfamily APT56_11775 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site APT56_11780 IPR036390 Winged helix DNA-binding domain superfamily APT56_11780 IPR000847 Transcription regulator HTH, LysR APT56_11780 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_11780 IPR005119 LysR, substrate-binding APT56_11785 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APT56_11785 IPR006143 RND efflux pump, membrane fusion protein APT56_11790 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APT56_11790 IPR001036 Acriflavin resistance protein APT56_11790 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 APT56_11795 IPR003423 Outer membrane efflux protein APT56_11795 IPR010131 RND efflux system, outer membrane lipoprotein, NodT APT56_11800 IPR007341 Transglycosylase-associated protein APT56_11805 IPR003782 Copper chaperone SCO1/SenC APT56_11805 IPR036249 Thioredoxin-like superfamily APT56_11815 IPR001567 Peptidase M3A/M3B catalytic domain APT56_11815 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 APT56_11820 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain APT56_11820 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain APT56_11820 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase APT56_11820 IPR036291 NAD(P)-binding domain superfamily APT56_11820 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site APT56_11825 IPR011006 CheY-like superfamily APT56_11825 IPR001789 Signal transduction response regulator, receiver domain APT56_11825 IPR016032 Signal transduction response regulator, C-terminal effector APT56_11825 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_11825 IPR000792 Transcription regulator LuxR, C-terminal APT56_11830 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain APT56_11830 IPR001610 PAC motif APT56_11830 IPR000014 PAS domain APT56_11830 IPR000700 PAS-associated, C-terminal APT56_11830 IPR035965 PAS domain superfamily APT56_11830 IPR013767 PAS fold APT56_11830 IPR004358 Signal transduction histidine kinase-related protein, C-terminal APT56_11830 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily APT56_11830 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APT56_11830 IPR003594 Histidine kinase/HSP90-like ATPase APT56_11830 IPR005467 Histidine kinase domain APT56_11835 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal APT56_11835 IPR005474 Transketolase, N-terminal APT56_11835 IPR029061 Thiamin diphosphate-binding fold APT56_11835 IPR004660 Pyruvate dehydrogenase E1 component APT56_11835 IPR041621 Pyruvate dehydrogenase E1 component, middle domain APT56_11835 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II APT56_11840 IPR011053 Single hybrid motif APT56_11840 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site APT56_11840 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain APT56_11840 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex APT56_11840 IPR000089 Biotin/lipoyl attachment APT56_11840 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily APT56_11840 IPR036625 E3-binding domain superfamily APT56_11840 IPR004167 Peripheral subunit-binding domain APT56_11845 IPR036188 FAD/NAD(P)-binding domain superfamily APT56_11845 IPR023753 FAD/NAD(P)-binding domain APT56_11845 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily APT56_11845 IPR006258 Dihydrolipoamide dehydrogenase APT56_11845 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I APT56_11845 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain APT56_11845 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site APT56_11855 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_11855 IPR005119 LysR, substrate-binding APT56_11855 IPR036390 Winged helix DNA-binding domain superfamily APT56_11855 IPR000847 Transcription regulator HTH, LysR APT56_11870 IPR014981 Flagellin D3 APT56_11870 IPR001029 Flagellin, D0/D1 domain APT56_11870 IPR001492 Flagellin APT56_11875 IPR018773 Methyltransferase regulatory domain, predicted APT56_11875 IPR025714 Methyltransferase domain APT56_11875 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT56_11880 IPR028617 RNA polymerase sigma factor FliA APT56_11880 IPR014284 RNA polymerase sigma-70 like domain APT56_11880 IPR013324 RNA polymerase sigma factor, region 3/4-like APT56_11880 IPR000943 RNA polymerase sigma-70 APT56_11880 IPR007624 RNA polymerase sigma-70 region 3 APT56_11880 IPR007630 RNA polymerase sigma-70 region 4 APT56_11880 IPR007627 RNA polymerase sigma-70 region 2 APT56_11880 IPR013325 RNA polymerase sigma factor, region 2 APT56_11880 IPR012845 RNA polymerase sigma factor, FliA/WhiG APT56_11885 IPR023559 Flagellar transcriptional activator FlhD APT56_11885 IPR036194 Flagellar transcriptional activator FlhD superfamily APT56_11890 IPR007944 Flagellar transcriptional activator FlhC APT56_11895 IPR022522 Flagellar motor stator, MotA APT56_11895 IPR000540 Flagellar motor protein MotA, conserved site APT56_11895 IPR002898 MotA/TolQ/ExbB proton channel APT56_11900 IPR025713 Motility protein B, N-terminal domain APT56_11900 IPR006665 OmpA-like domain APT56_11900 IPR036737 OmpA-like domain superfamily APT56_11905 IPR011006 CheY-like superfamily APT56_11905 IPR001789 Signal transduction response regulator, receiver domain APT56_11910 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily APT56_11910 IPR005467 Histidine kinase domain APT56_11910 IPR004358 Signal transduction histidine kinase-related protein, C-terminal APT56_11910 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APT56_11910 IPR003594 Histidine kinase/HSP90-like ATPase APT56_11910 IPR036641 HPT domain superfamily APT56_11910 IPR015162 CheY binding APT56_11910 IPR035891 CheY-binding domain of CheA APT56_11910 IPR004105 Histidine kinase CheA-like, homodimeric domain APT56_11910 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily APT56_11910 IPR036061 CheW-like domain superfamily APT56_11910 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain APT56_11910 IPR002545 CheW-like domain APT56_11915 IPR039315 Chemotaxis protein CheW APT56_11915 IPR002545 CheW-like domain APT56_11915 IPR036061 CheW-like domain superfamily APT56_11920 IPR003660 HAMP domain APT56_11920 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily APT56_11920 IPR004090 Chemotaxis methyl-accepting receptor APT56_11920 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding APT56_11920 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain APT56_11920 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site APT56_11925 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT56_11925 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily APT56_11925 IPR026024 Chemotaxis protein methyltransferase CheR APT56_11925 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal APT56_11925 IPR000780 MCP methyltransferase, CheR-type APT56_11925 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal APT56_11930 IPR001789 Signal transduction response regulator, receiver domain APT56_11930 IPR011006 CheY-like superfamily APT56_11930 IPR035909 Methylesterase CheB, C-terminal APT56_11930 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type APT56_11930 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase APT56_11935 IPR011006 CheY-like superfamily APT56_11935 IPR001789 Signal transduction response regulator, receiver domain APT56_11940 IPR007439 Chemotaxis phosphatase, CheZ APT56_11945 IPR004090 Chemotaxis methyl-accepting receptor APT56_11945 IPR032255 Helical bimodular sensor domain APT56_11945 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain APT56_11945 IPR003660 HAMP domain APT56_11950 IPR029025 Type III secretion system substrate exporter, C-terminal APT56_11950 IPR006135 Type III secretion system substrate exporter APT56_11950 IPR006136 Flagellar biosynthetic protein FlhB APT56_11955 IPR042193 FHIPEP, domain 3 APT56_11955 IPR001712 Type III secretion system FHIPEP APT56_11955 IPR006301 Flagellar biosynthesis protein FlhA APT56_11955 IPR042194 FHIPEP, domain 1 APT56_11955 IPR042196 FHIPEP, domain 4 APT56_11955 IPR025505 FHIPEP conserved site APT56_11960 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_11960 IPR020006 Flagellar biosynthesis protein FlhF APT56_11960 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain APT56_11960 IPR003593 AAA+ ATPase domain APT56_11970 IPR031316 Anti-sigma-28 factor FlgM, C-terminal APT56_11970 IPR035890 Anti-sigma-28 factor FlgM superfamily APT56_11970 IPR007412 Anti-sigma-28 factor, FlgM APT56_11980 IPR019776 Flagellar basal body rod protein, conserved site APT56_11980 IPR001444 Flagellar basal body rod protein, N-terminal APT56_11980 IPR006300 Flagellar basal-body rod protein FlgB APT56_11985 IPR006299 Flagellar basal-body rod protein FlgC APT56_11985 IPR010930 Flagellar basal-body/hook protein, C-terminal domain APT56_11985 IPR019776 Flagellar basal body rod protein, conserved site APT56_11985 IPR001444 Flagellar basal body rod protein, N-terminal APT56_11990 IPR005648 Flagellar hook capping protein APT56_11990 IPR025963 FlgD Tudor-like domain APT56_11990 IPR025965 FlgD Ig-like domain APT56_11995 IPR011491 Flagellar hook protein FlgE APT56_11995 IPR001444 Flagellar basal body rod protein, N-terminal APT56_11995 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like APT56_11995 IPR037058 Flagellar hook protein FlgE superfamily APT56_11995 IPR010930 Flagellar basal-body/hook protein, C-terminal domain APT56_11995 IPR020013 Flagellar hook-basal body protein, FlgE/F/G APT56_11995 IPR019776 Flagellar basal body rod protein, conserved site APT56_12000 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like APT56_12000 IPR019776 Flagellar basal body rod protein, conserved site APT56_12000 IPR020013 Flagellar hook-basal body protein, FlgE/F/G APT56_12000 IPR001444 Flagellar basal body rod protein, N-terminal APT56_12000 IPR010930 Flagellar basal-body/hook protein, C-terminal domain APT56_12005 IPR020013 Flagellar hook-basal body protein, FlgE/F/G APT56_12005 IPR001444 Flagellar basal body rod protein, N-terminal APT56_12005 IPR019776 Flagellar basal body rod protein, conserved site APT56_12005 IPR010930 Flagellar basal-body/hook protein, C-terminal domain APT56_12005 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like APT56_12005 IPR012834 Flagellar basal-body rod FlgG APT56_12010 IPR000527 Flagellar L-ring protein APT56_12015 IPR001782 Flagellar P-ring protein APT56_12020 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain APT56_12020 IPR013377 Peptidoglycan hydrolase FlgJ APT56_12020 IPR019301 Flagellar protein FlgJ, N-terminal APT56_12025 IPR010930 Flagellar basal-body/hook protein, C-terminal domain APT56_12025 IPR002371 Flagellar hook-associated protein 1 APT56_12025 IPR001444 Flagellar basal body rod protein, N-terminal APT56_12025 IPR019776 Flagellar basal body rod protein, conserved site APT56_12030 IPR013384 Flagellar hook-associated protein 3 APT56_12030 IPR001029 Flagellin, D0/D1 domain APT56_12035 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily APT56_12035 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain APT56_12035 IPR003660 HAMP domain APT56_12035 IPR004090 Chemotaxis methyl-accepting receptor APT56_12035 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding APT56_12035 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site APT56_12040 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site APT56_12040 IPR003660 HAMP domain APT56_12040 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily APT56_12040 IPR004090 Chemotaxis methyl-accepting receptor APT56_12040 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding APT56_12040 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain APT56_12050 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily APT56_12050 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding APT56_12050 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain APT56_12050 IPR003660 HAMP domain APT56_12050 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site APT56_12050 IPR004090 Chemotaxis methyl-accepting receptor APT56_12055 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain APT56_12055 IPR013655 PAS fold-3 APT56_12055 IPR001610 PAC motif APT56_12055 IPR035965 PAS domain superfamily APT56_12055 IPR000014 PAS domain APT56_12055 IPR003660 HAMP domain APT56_12055 IPR004090 Chemotaxis methyl-accepting receptor APT56_12060 IPR006303 Flagellar biosynthesis protein FliR APT56_12060 IPR002010 Type III secretion system inner membrane R protein APT56_12065 IPR006305 Flagellar biosynthesis protein FliQ APT56_12065 IPR002191 Bacterial export protein family 3 APT56_12070 IPR005837 Flagellar transport protein FliP APT56_12070 IPR005838 Type III secretion system inner membrane P protein APT56_12075 IPR022781 Flagellar biosynthesis protein, FliO APT56_12080 IPR036429 SpoA-like superfamily APT56_12080 IPR001543 Surface presentation of antigen (SpoA) APT56_12080 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb APT56_12080 IPR031576 Flagellar motor switch protein FliN, N-terminal APT56_12080 IPR012826 Flagellar motor switch FliN APT56_12085 IPR028976 CheC-like superfamily APT56_12085 IPR001689 Flagellar motor switch protein FliM APT56_12085 IPR001543 Surface presentation of antigen (SpoA) APT56_12085 IPR036429 SpoA-like superfamily APT56_12090 IPR005503 Flagellar basal body-associated protein FliL APT56_12105 IPR040627 T3SS EscN ATPase, C-terminal APT56_12105 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_12105 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site APT56_12105 IPR003593 AAA+ ATPase domain APT56_12105 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain APT56_12105 IPR032463 ATPase, type III secretion system, FliI APT56_12105 IPR020005 Flagellar export ATPase FliI, clade 1 APT56_12105 IPR005714 ATPase, type III secretion system, FliI/YscN APT56_12115 IPR011002 Flagellar motor switch protein FliG, alpha-helical APT56_12115 IPR032779 Flagellar motor switch protein FliG, middle domain APT56_12115 IPR028263 Flagellar motor switch protein FliG, N-terminal domain APT56_12115 IPR023087 Flagellar motor switch protein FliG, C-terminal APT56_12115 IPR000090 Flagellar motor switch protein FliG APT56_12120 IPR006182 Secretory protein YscJ/FliF APT56_12120 IPR000067 Flagellar M-ring protein FliF APT56_12120 IPR013556 Flagellar M-ring C-terminal APT56_12125 IPR001624 Flagellar hook-basal body complex protein FliE APT56_12135 IPR006135 Type III secretion system substrate exporter APT56_12135 IPR029025 Type III secretion system substrate exporter, C-terminal APT56_12135 IPR006136 Flagellar biosynthetic protein FlhB APT56_12150 IPR036584 Flagellar protein FliS superfamily APT56_12150 IPR003713 Flagellar protein FliS APT56_12155 IPR040026 Flagellar hook-associated protein 2 APT56_12155 IPR003481 Flagellar hook-associated protein 2, N-terminal APT56_12155 IPR010809 Flagellar hook-associated protein 2, C-terminal APT56_12170 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain APT56_12170 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal APT56_12170 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily APT56_12170 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily APT56_12170 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal APT56_12170 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal APT56_12175 IPR023606 CoA-transferase family III domain superfamily APT56_12175 IPR003673 CoA-transferase family III APT56_12180 IPR042100 Bordetella uptake gene, domain 1 APT56_12180 IPR005064 Bordetella uptake gene APT56_12190 IPR001645 Folylpolyglutamate synthetase APT56_12190 IPR018109 Folylpolyglutamate synthetase, conserved site APT56_12190 IPR036565 Mur-like, catalytic domain superfamily APT56_12190 IPR004101 Mur ligase, C-terminal APT56_12190 IPR036615 Mur ligase, C-terminal domain superfamily APT56_12190 IPR013221 Mur ligase, central APT56_12200 IPR003825 Colicin V production, CvpA APT56_12205 IPR029057 Phosphoribosyltransferase-like APT56_12205 IPR000836 Phosphoribosyltransferase domain APT56_12205 IPR029055 Nucleophile aminohydrolases, N-terminal APT56_12205 IPR005854 Amidophosphoribosyltransferase APT56_12205 IPR017932 Glutamine amidotransferase type 2 domain APT56_12205 IPR035584 Amidophosphoribosyltransferase, N-terminal APT56_12210 IPR002725 Protein of unknown function DUF45 APT56_12220 IPR022920 Disulphide bond formation protein DsbB APT56_12220 IPR003752 Disulphide bond formation protein DsbB/BdbC APT56_12220 IPR023380 DsbB-like superfamily APT56_12230 IPR002912 ACT domain APT56_12230 IPR003607 HD/PDEase domain APT56_12230 IPR006674 HD domain APT56_12230 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase APT56_12230 IPR002934 Polymerase, nucleotidyl transferase domain APT56_12230 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme APT56_12235 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 APT56_12235 IPR001714 Peptidase M24, methionine aminopeptidase APT56_12235 IPR000994 Peptidase M24 APT56_12235 IPR036005 Creatinase/aminopeptidase-like APT56_12240 IPR001865 Ribosomal protein S2 APT56_12240 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid APT56_12240 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily APT56_12240 IPR018130 Ribosomal protein S2, conserved site APT56_12245 IPR001816 Translation elongation factor EFTs/EF1B APT56_12245 IPR018101 Translation elongation factor Ts, conserved site APT56_12245 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation APT56_12245 IPR036402 Elongation factor Ts, dimerisation domain superfamily APT56_12245 IPR009060 UBA-like superfamily APT56_12250 IPR015963 Uridylate kinase, bacteria APT56_12250 IPR001048 Aspartate/glutamate/uridylate kinase APT56_12250 IPR036393 Acetylglutamate kinase-like superfamily APT56_12250 IPR011817 Uridylate kinase APT56_12255 IPR002661 Ribosome recycling factor APT56_12255 IPR023584 Ribosome recycling factor domain APT56_12255 IPR036191 RRF superfamily APT56_12260 IPR001441 Decaprenyl diphosphate synthase-like APT56_12260 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site APT56_12260 IPR036424 Decaprenyl diphosphate synthase-like superfamily APT56_12265 IPR000374 Phosphatidate cytidylyltransferase APT56_12270 IPR026877 DXP reductoisomerase C-terminal domain APT56_12270 IPR036291 NAD(P)-binding domain superfamily APT56_12270 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal APT56_12270 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase APT56_12270 IPR036169 DXP reductoisomerase, C-terminal domain superfamily APT56_12270 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal APT56_12275 IPR041489 PDZ domain 6 APT56_12275 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase APT56_12275 IPR036034 PDZ superfamily APT56_12275 IPR001478 PDZ domain APT56_12275 IPR008915 Peptidase M50 APT56_12280 IPR039910 Surface antigen D15-like APT56_12280 IPR000184 Bacterial surface antigen (D15) APT56_12280 IPR023707 Outer membrane protein assembly factor BamA APT56_12280 IPR034746 POTRA domain APT56_12280 IPR010827 POTRA domain, BamA/TamA-like APT56_12285 IPR024930 Skp domain superfamily APT56_12285 IPR005632 Chaperone protein Skp APT56_12290 IPR011004 Trimeric LpxA-like superfamily APT56_12290 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD APT56_12290 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region APT56_12290 IPR001451 Hexapeptide repeat APT56_12290 IPR018357 Hexapeptide transferase, conserved site APT56_12295 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ APT56_12295 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ APT56_12295 IPR029069 HotDog domain superfamily APT56_12300 IPR001451 Hexapeptide repeat APT56_12300 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily APT56_12300 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase APT56_12300 IPR011004 Trimeric LpxA-like superfamily APT56_12300 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal APT56_12305 IPR003835 Glycosyl transferase, family 19 APT56_12310 IPR024567 Ribonuclease HII/HIII domain APT56_12310 IPR022898 Ribonuclease HII APT56_12310 IPR012337 Ribonuclease H-like superfamily APT56_12310 IPR036397 Ribonuclease H superfamily APT56_12310 IPR001352 Ribonuclease HII/HIII APT56_12315 IPR013123 RNA 2-O ribose methyltransferase, substrate binding APT56_12315 IPR001537 tRNA/rRNA methyltransferase, SpoU type APT56_12315 IPR029064 50S ribosomal protein L30e-like APT56_12315 IPR029028 Alpha/beta knot methyltransferases APT56_12315 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APT56_12335 IPR005177 Bifunctional kinase-pyrophosphorylase APT56_12335 IPR026530 Phosphoenolpyruvate synthase regulatory protein APT56_12340 IPR040442 Pyruvate kinase-like domain superfamily APT56_12340 IPR018274 PEP-utilising enzyme, active site APT56_12340 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding APT56_12340 IPR000121 PEP-utilising enzyme, C-terminal APT56_12340 IPR023151 PEP-utilising enzyme, conserved site APT56_12340 IPR036637 Phosphohistidine domain superfamily APT56_12340 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily APT56_12340 IPR006319 Phosphoenolpyruvate synthase APT56_12340 IPR008279 PEP-utilising enzyme, mobile domain APT56_12340 IPR013815 ATP-grasp fold, subdomain 1 APT56_12345 IPR012910 TonB-dependent receptor, plug domain APT56_12345 IPR037066 TonB-dependent receptor, plug domain superfamily APT56_12345 IPR010916 TonB box, conserved site APT56_12345 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily APT56_12345 IPR010105 TonB-dependent siderophore receptor APT56_12345 IPR000531 TonB-dependent receptor-like, beta-barrel APT56_12345 IPR039423 TonB-dependent receptor-like APT56_12355 IPR014284 RNA polymerase sigma-70 like domain APT56_12355 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_12355 IPR013324 RNA polymerase sigma factor, region 3/4-like APT56_12355 IPR013325 RNA polymerase sigma factor, region 2 APT56_12355 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 APT56_12355 IPR007627 RNA polymerase sigma-70 region 2 APT56_12355 IPR032710 NTF2-like domain superfamily APT56_12360 IPR018060 DNA binding HTH domain, AraC-type APT56_12360 IPR009057 Homeobox-like domain superfamily APT56_12360 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily APT56_12360 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site APT56_12360 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding APT56_12360 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_12360 IPR016221 Bifunctional regulatory protein Ada APT56_12360 IPR004026 Ada DNA repair, metal-binding APT56_12360 IPR035451 Ada-like domain superfamily APT56_12360 IPR018062 HTH domain AraC-type, conserved site APT56_12360 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain APT56_12360 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain APT56_12365 IPR017926 Glutamine amidotransferase APT56_12365 IPR029062 Class I glutamine amidotransferase-like APT56_12365 IPR004739 GMP synthase, glutamine amidotransferase APT56_12365 IPR022955 GMP synthase APT56_12365 IPR025777 GMP synthetase ATP pyrophosphatase domain APT56_12365 IPR022310 NAD/GMP synthase APT56_12365 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT56_12365 IPR001674 GMP synthase, C-terminal APT56_12375 IPR001972 Stomatin family APT56_12375 IPR018080 Band 7/stomatin-like, conserved site APT56_12375 IPR036013 Band 7/SPFH domain superfamily APT56_12375 IPR001107 Band 7 domain APT56_12380 IPR039435 Diguanylate cyclase DosC, globin sensor domain APT56_12380 IPR009050 Globin-like superfamily APT56_12380 IPR012292 Globin/Protoglobin APT56_12380 IPR029787 Nucleotide cyclase APT56_12380 IPR000160 GGDEF domain APT56_12385 IPR000037 SsrA-binding protein APT56_12385 IPR023620 Small protein B APT56_12385 IPR020081 SsrA-binding protein, conserved site APT56_12390 IPR023393 START-like domain superfamily APT56_12390 IPR005031 Coenzyme Q-binding protein COQ10, START domain APT56_12395 IPR037021 RnfH superfamily APT56_12395 IPR033655 RelA, TGS domain APT56_12395 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp APT56_12395 IPR005346 RnfH protein APT56_12400 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain APT56_12400 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal APT56_12400 IPR006089 Acyl-CoA dehydrogenase, conserved site APT56_12400 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal APT56_12400 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily APT56_12400 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal APT56_12400 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily APT56_12405 IPR001753 Enoyl-CoA hydratase/isomerase APT56_12405 IPR036291 NAD(P)-binding domain superfamily APT56_12405 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site APT56_12405 IPR012799 Fatty oxidation complex, alpha subunit FadB APT56_12405 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily APT56_12405 IPR029045 ClpP/crotonase-like domain superfamily APT56_12405 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal APT56_12405 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site APT56_12405 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding APT56_12410 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site APT56_12410 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding APT56_12410 IPR013328 6-phosphogluconate dehydrogenase, domain 2 APT56_12410 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily APT56_12410 IPR015815 3-hydroxyisobutyrate dehydrogenase-related APT56_12410 IPR011548 3-hydroxyisobutyrate dehydrogenase APT56_12410 IPR036291 NAD(P)-binding domain superfamily APT56_12410 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain APT56_12425 IPR006222 Aminomethyltransferase, folate-binding domain APT56_12425 IPR017703 YgfZ/GcvT conserved site APT56_12425 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal APT56_12425 IPR023758 tRNA-modifying protein YgfZ APT56_12430 IPR003770 Endolytic murein transglycosylase APT56_12435 IPR018094 Thymidylate kinase APT56_12435 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_12435 IPR039430 Thymidylate kinase-like domain APT56_12440 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal APT56_12440 IPR012763 DNA polymerase III, subunit gamma/ tau APT56_12440 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_12440 IPR001270 ClpA/B family APT56_12440 IPR003593 AAA+ ATPase domain APT56_12440 IPR022754 DNA polymerase III, gamma subunit, domain III APT56_12445 IPR032466 Metal-dependent hydrolase APT56_12445 IPR018228 Deoxyribonuclease, TatD-related, conserved site APT56_12445 IPR001130 TatD family APT56_12445 IPR015991 Uncharacterised hydrolase TatD-type APT56_12460 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APT56_12460 IPR018313 Solute-binding protein family 3, conserved site APT56_12460 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter APT56_12460 IPR001320 Ionotropic glutamate receptor APT56_12470 IPR003593 AAA+ ATPase domain APT56_12470 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type APT56_12470 IPR017871 ABC transporter, conserved site APT56_12470 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_12470 IPR003439 ABC transporter-like APT56_12475 IPR005923 Formiminoglutamase APT56_12475 IPR006035 Ureohydrolase APT56_12475 IPR023696 Ureohydrolase domain superfamily APT56_12475 IPR020855 Ureohydrolase, manganese-binding site APT56_12480 IPR012951 Berberine/berberine-like APT56_12480 IPR006311 Twin-arginine translocation pathway, signal sequence APT56_12480 IPR006094 FAD linked oxidase, N-terminal APT56_12480 IPR016166 FAD-binding domain, PCMH-type APT56_12480 IPR036318 FAD-binding, type PCMH-like superfamily APT56_12485 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain APT56_12485 IPR033922 NAD(P) binding domain of glutamate dehydrogenase APT56_12485 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal APT56_12485 IPR033524 Leu/Phe/Val dehydrogenases active site APT56_12485 IPR036291 NAD(P)-binding domain superfamily APT56_12485 IPR014362 Glutamate dehydrogenase APT56_12485 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase APT56_12495 IPR019491 Lipoate protein ligase, C-terminal APT56_12495 IPR004562 Lipoyltransferase/lipoate-protein ligase APT56_12495 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain APT56_12510 IPR036249 Thioredoxin-like superfamily APT56_12510 IPR004046 Glutathione S-transferase, C-terminal APT56_12510 IPR004045 Glutathione S-transferase, N-terminal APT56_12510 IPR036282 Glutathione S-transferase, C-terminal domain superfamily APT56_12510 IPR010987 Glutathione S-transferase, C-terminal-like APT56_12520 IPR000485 AsnC-type HTH domain APT56_12520 IPR019888 Transcription regulator AsnC-type APT56_12520 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain APT56_12520 IPR019885 Transcription regulator HTH, AsnC-type, conserved site APT56_12520 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_12520 IPR036390 Winged helix DNA-binding domain superfamily APT56_12520 IPR011008 Dimeric alpha-beta barrel APT56_12525 IPR036249 Thioredoxin-like superfamily APT56_12525 IPR029760 Glutathione peroxidase conserved site APT56_12525 IPR000889 Glutathione peroxidase APT56_12525 IPR029759 Glutathione peroxidase active site APT56_12530 IPR020846 Major facilitator superfamily domain APT56_12530 IPR011701 Major facilitator superfamily APT56_12530 IPR036259 MFS transporter superfamily APT56_12545 IPR011990 Tetratricopeptide-like helical domain superfamily APT56_12545 IPR019734 Tetratricopeptide repeat APT56_12545 IPR013026 Tetratricopeptide repeat-containing domain APT56_12550 IPR005119 LysR, substrate-binding APT56_12550 IPR036390 Winged helix DNA-binding domain superfamily APT56_12550 IPR037418 HTH-type transcriptional regulator TrpI, PBP2 APT56_12550 IPR000847 Transcription regulator HTH, LysR APT56_12550 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_12555 IPR031475 Nucleotide-binding C-terminal domain APT56_12555 IPR042213 Nucleotide-binding, C-terminal domain superfamily APT56_12555 IPR010737 Four-carbon acid sugar kinase, N-terminal domain APT56_12555 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily APT56_12560 IPR005255 PdxA family APT56_12570 IPR001610 PAC motif APT56_12570 IPR004090 Chemotaxis methyl-accepting receptor APT56_12570 IPR003660 HAMP domain APT56_12570 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain APT56_12570 IPR013655 PAS fold-3 APT56_12570 IPR000014 PAS domain APT56_12570 IPR035965 PAS domain superfamily APT56_12575 IPR002081 Cryptochrome/DNA photolyase class 1 APT56_12575 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain APT56_12575 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily APT56_12575 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily APT56_12575 IPR006050 DNA photolyase, N-terminal APT56_12575 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal APT56_12575 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT56_12580 IPR023606 CoA-transferase family III domain superfamily APT56_12580 IPR003673 CoA-transferase family III APT56_12585 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant APT56_12585 IPR013766 Thioredoxin domain APT56_12585 IPR036249 Thioredoxin-like superfamily APT56_12585 IPR024706 Peroxiredoxin, AhpC-type APT56_12600 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site APT56_12600 IPR014014 RNA helicase, DEAD-box type, Q motif APT56_12600 IPR014001 Helicase superfamily 1/2, ATP-binding domain APT56_12600 IPR001650 Helicase, C-terminal APT56_12600 IPR011545 DEAD/DEAH box helicase domain APT56_12600 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain APT56_12600 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily APT56_12600 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_12600 IPR028619 ATP-dependent RNA helicase DbpA APT56_12605 IPR029016 GAF-like domain superfamily APT56_12605 IPR014757 Transcription regulator IclR, C-terminal APT56_12605 IPR005471 Transcription regulator IclR, N-terminal APT56_12605 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_12605 IPR036390 Winged helix DNA-binding domain superfamily APT56_12610 IPR017820 Sulphoacetaldehyde acetyltransferase APT56_12610 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding APT56_12610 IPR029035 DHS-like NAD/FAD-binding domain superfamily APT56_12610 IPR029061 Thiamin diphosphate-binding fold APT56_12610 IPR012000 Thiamine pyrophosphate enzyme, central domain APT56_12610 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain APT56_12615 IPR002505 Phosphate acetyl/butaryl transferase APT56_12615 IPR012147 Phosphate acetyl/butyryltransferase APT56_12620 IPR030678 Peptide/nickel binding protein, MppA-type APT56_12620 IPR000914 Solute-binding protein family 5 domain APT56_12620 IPR023765 Solute-binding protein family 5, conserved site APT56_12620 IPR039424 Solute-binding protein family 5 APT56_12625 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_12625 IPR035906 MetI-like superfamily APT56_12630 IPR025966 Oligopeptide transport permease C-like, N-terminal domain APT56_12630 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_12630 IPR035906 MetI-like superfamily APT56_12635 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal APT56_12635 IPR003439 ABC transporter-like APT56_12635 IPR003593 AAA+ ATPase domain APT56_12635 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_12635 IPR017871 ABC transporter, conserved site APT56_12640 IPR005920 Imidazolonepropionase APT56_12640 IPR011059 Metal-dependent hydrolase, composite domain superfamily APT56_12640 IPR006680 Amidohydrolase-related APT56_12640 IPR032466 Metal-dependent hydrolase APT56_12645 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal APT56_12645 IPR036627 CobW-like, C-terminal domain superfamily APT56_12645 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_12645 IPR012824 Cobalamin (vitamin B12) biosynthesis CobW APT56_12645 IPR003495 CobW/HypB/UreG, nucleotide-binding domain APT56_12660 IPR024973 ESPR domain APT56_12660 IPR036709 Autotransporter beta-domain superfamily APT56_12660 IPR000710 Peptidase S6, IgA endopeptidase APT56_12660 IPR011050 Pectin lyase fold/virulence factor APT56_12660 IPR030396 Peptidase family S6 domain APT56_12660 IPR006315 Outer membrane autotransporter barrel APT56_12660 IPR030396 Peptidase family S6 domain APT56_12660 IPR000710 Peptidase S6, IgA endopeptidase APT56_12660 IPR012332 P22 tailspike-like, C-terminal domain superfamily APT56_12660 IPR011050 Pectin lyase fold/virulence factor APT56_12660 IPR012332 P22 tailspike-like, C-terminal domain superfamily APT56_12660 IPR005546 Autotransporter beta-domain APT56_12660 IPR024973 ESPR domain APT56_12660 IPR006315 Outer membrane autotransporter barrel APT56_12660 IPR036709 Autotransporter beta-domain superfamily APT56_12660 IPR005546 Autotransporter beta-domain APT56_12665 IPR036390 Winged helix DNA-binding domain superfamily APT56_12665 IPR000524 Transcription regulator HTH, GntR APT56_12665 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APT56_12665 IPR004839 Aminotransferase, class I/classII APT56_12665 IPR015424 Pyridoxal phosphate-dependent transferase APT56_12665 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_12675 IPR035906 MetI-like superfamily APT56_12675 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_12680 IPR017871 ABC transporter, conserved site APT56_12680 IPR003439 ABC transporter-like APT56_12680 IPR003593 AAA+ ATPase domain APT56_12680 IPR015859 ABC transporter, taurine import, TauD APT56_12680 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_12685 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain APT56_12685 IPR010068 Taurine ABC transporter, substrate-binding protein TauA APT56_12685 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APT56_12690 IPR036390 Winged helix DNA-binding domain superfamily APT56_12690 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_12690 IPR005119 LysR, substrate-binding APT56_12690 IPR000847 Transcription regulator HTH, LysR APT56_12695 IPR000620 EamA domain APT56_12695 IPR004779 Carboxylate/Amino Acid/Amine Transporter APT56_12700 IPR018234 GTP cyclohydrolase I, conserved site APT56_12700 IPR001474 GTP cyclohydrolase I APT56_12700 IPR020602 GTP cyclohydrolase I domain APT56_12705 IPR016032 Signal transduction response regulator, C-terminal effector APT56_12705 IPR011006 CheY-like superfamily APT56_12705 IPR001789 Signal transduction response regulator, receiver domain APT56_12705 IPR000792 Transcription regulator LuxR, C-terminal APT56_12710 IPR017171 Signal transduction histidine kinase, MctS APT56_12710 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain APT56_12710 IPR003594 Histidine kinase/HSP90-like ATPase APT56_12710 IPR033480 Single Cache domain 2 APT56_12710 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APT56_12715 IPR025299 CstA, C-terminal domain APT56_12715 IPR003706 CstA, N-terminal domain APT56_12720 IPR007423 Selenoprotein, putative APT56_12725 IPR000620 EamA domain APT56_12730 IPR004839 Aminotransferase, class I/classII APT56_12730 IPR015424 Pyridoxal phosphate-dependent transferase APT56_12730 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APT56_12730 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APT56_12730 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_12730 IPR036390 Winged helix DNA-binding domain superfamily APT56_12730 IPR000524 Transcription regulator HTH, GntR APT56_12750 IPR023188 DNA-binding protein Dps, conserved site APT56_12750 IPR002177 DNA-binding protein Dps APT56_12750 IPR008331 Ferritin/DPS protein domain APT56_12750 IPR009078 Ferritin-like superfamily APT56_12750 IPR012347 Ferritin-like APT56_12760 IPR005546 Autotransporter beta-domain APT56_12760 IPR012332 P22 tailspike-like, C-terminal domain superfamily APT56_12760 IPR011050 Pectin lyase fold/virulence factor APT56_12760 IPR036709 Autotransporter beta-domain superfamily APT56_12760 IPR006315 Outer membrane autotransporter barrel APT56_12760 IPR013425 Autotransporter-associated beta strand repeat APT56_12765 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily APT56_12765 IPR002569 Peptide methionine sulphoxide reductase MsrA APT56_12770 IPR028427 Peptide methionine sulfoxide reductase APT56_12770 IPR002579 Peptide methionine sulphoxide reductase MrsB APT56_12770 IPR011057 Mss4-like superfamily APT56_12780 IPR000572 Oxidoreductase, molybdopterin-binding domain APT56_12780 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily APT56_12785 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase APT56_12785 IPR016174 Di-haem cytochrome, transmembrane APT56_12790 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_12790 IPR001789 Signal transduction response regulator, receiver domain APT56_12790 IPR011006 CheY-like superfamily APT56_12790 IPR039420 Transcriptional regulatory protein WalR-like APT56_12790 IPR001867 OmpR/PhoB-type DNA-binding domain APT56_12795 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain APT56_12795 IPR041328 ResE, histidine kinase sensor domain APT56_12795 IPR003594 Histidine kinase/HSP90-like ATPase APT56_12795 IPR000014 PAS domain APT56_12795 IPR005467 Histidine kinase domain APT56_12795 IPR003660 HAMP domain APT56_12795 IPR035965 PAS domain superfamily APT56_12795 IPR013767 PAS fold APT56_12795 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APT56_12795 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily APT56_12795 IPR004358 Signal transduction histidine kinase-related protein, C-terminal APT56_12800 IPR004136 Nitronate monooxygenase APT56_12800 IPR013785 Aldolase-type TIM barrel APT56_12815 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain superfamily APT56_12815 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II APT56_12815 IPR004553 Hydroxymethylglutaryl-CoA reductase, bacterial-type APT56_12815 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain superfamily APT56_12815 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily APT56_12815 IPR023076 Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site APT56_12820 IPR000524 Transcription regulator HTH, GntR APT56_12820 IPR004839 Aminotransferase, class I/classII APT56_12820 IPR015424 Pyridoxal phosphate-dependent transferase APT56_12820 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APT56_12820 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APT56_12820 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_12820 IPR036390 Winged helix DNA-binding domain superfamily APT56_12850 IPR042100 Bordetella uptake gene, domain 1 APT56_12850 IPR005064 Bordetella uptake gene APT56_12855 IPR002933 Peptidase M20 APT56_12855 IPR036264 Bacterial exopeptidase dimerisation domain APT56_12855 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site APT56_12855 IPR011650 Peptidase M20, dimerisation domain APT56_12855 IPR017150 Peptidase M20, glutamate carboxypeptidase APT56_12860 IPR036390 Winged helix DNA-binding domain superfamily APT56_12860 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_12860 IPR000847 Transcription regulator HTH, LysR APT56_12860 IPR005119 LysR, substrate-binding APT56_12865 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APT56_12865 IPR001036 Acriflavin resistance protein APT56_12865 IPR023931 Multidrug resistance protein MdtC APT56_12870 IPR005119 LysR, substrate-binding APT56_12870 IPR000847 Transcription regulator HTH, LysR APT56_12870 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_12870 IPR036390 Winged helix DNA-binding domain superfamily APT56_12875 IPR017631 Salicylate 1-monooxygenase APT56_12875 IPR036188 FAD/NAD(P)-binding domain superfamily APT56_12875 IPR002938 FAD-binding domain APT56_12890 IPR020846 Major facilitator superfamily domain APT56_12890 IPR011701 Major facilitator superfamily APT56_12890 IPR036259 MFS transporter superfamily APT56_12895 IPR004737 Nitrate transporter APT56_12895 IPR036259 MFS transporter superfamily APT56_12895 IPR011701 Major facilitator superfamily APT56_12900 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site APT56_12900 IPR006656 Molybdopterin oxidoreductase APT56_12900 IPR006657 Molybdopterin dinucleotide-binding domain APT56_12900 IPR028189 Nitrate reductase, alpha subunit, N-terminal APT56_12900 IPR037943 Nitrate reductase alpha subunit-like, MopB domain APT56_12900 IPR009010 Aspartate decarboxylase-like domain superfamily APT56_12900 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site APT56_12900 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain APT56_12900 IPR006468 Nitrate reductase, alpha subunit APT56_12905 IPR038262 Nitrate reductase beta, C-terminal domain superfamily APT56_12905 IPR029263 Respiratory nitrate reductase beta, C-terminal APT56_12905 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APT56_12905 IPR006547 Nitrate reductase, beta subunit APT56_12910 IPR003765 Nitrate reductase chaperone, NarJ APT56_12910 IPR020945 DMSO/Nitrate reductase chaperone APT56_12910 IPR036411 TorD-like superfamily APT56_12910 IPR042291 Nitrate reductase chaperone, NarJ, domain 2 APT56_12910 IPR042290 Nitrate reductase chaperone, NarJ, domain 1 APT56_12915 IPR003816 Nitrate reductase, gamma subunit APT56_12915 IPR023234 NarG-like domain APT56_12915 IPR036197 NarG-like superfamily APT56_12920 IPR015391 SurA N-terminal APT56_12920 IPR027304 Trigger factor/SurA domain superfamily APT56_12920 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type APT56_12920 IPR023034 Peptidyl-prolyl isomerase SurA APT56_12920 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site APT56_12925 IPR007197 Radical SAM APT56_12925 IPR010505 Molybdenum cofactor synthesis C-terminal APT56_12925 IPR013785 Aldolase-type TIM barrel APT56_12925 IPR006638 Elp3/MiaB/NifB APT56_12925 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site APT56_12925 IPR013483 Molybdenum cofactor biosynthesis protein A APT56_12930 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site APT56_12930 IPR001765 Carbonic anhydrase APT56_12930 IPR036874 Carbonic anhydrase superfamily APT56_12935 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_12935 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain APT56_12940 IPR029095 NarX-like, N-terminal APT56_12940 IPR042295 NarX-like, N-terminal domain superfamily APT56_12940 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing APT56_12940 IPR003594 Histidine kinase/HSP90-like ATPase APT56_12940 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain APT56_12940 IPR003660 HAMP domain APT56_12940 IPR005467 Histidine kinase domain APT56_12940 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APT56_12945 IPR011006 CheY-like superfamily APT56_12945 IPR000792 Transcription regulator LuxR, C-terminal APT56_12945 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_12945 IPR016032 Signal transduction response regulator, C-terminal effector APT56_12945 IPR001789 Signal transduction response regulator, receiver domain APT56_12965 IPR035906 MetI-like superfamily APT56_12965 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain APT56_12965 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_12970 IPR018313 Solute-binding protein family 3, conserved site APT56_12970 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APT56_12980 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme APT56_12980 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase APT56_12980 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APT56_12980 IPR015424 Pyridoxal phosphate-dependent transferase APT56_12980 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APT56_12985 IPR000639 Epoxide hydrolase-like APT56_12985 IPR000073 Alpha/beta hydrolase fold-1 APT56_12985 IPR029058 Alpha/Beta hydrolase fold APT56_13005 IPR017871 ABC transporter, conserved site APT56_13005 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB APT56_13005 IPR003439 ABC transporter-like APT56_13005 IPR003593 AAA+ ATPase domain APT56_13005 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_13010 IPR006311 Twin-arginine translocation pathway, signal sequence APT56_13015 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_13015 IPR035906 MetI-like superfamily APT56_13015 IPR005889 Nitrate transport permease APT56_13030 IPR008920 Transcription regulator FadR/GntR, C-terminal APT56_13030 IPR000524 Transcription regulator HTH, GntR APT56_13030 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_13030 IPR011711 GntR, C-terminal APT56_13030 IPR036390 Winged helix DNA-binding domain superfamily APT56_13035 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site APT56_13035 IPR037237 IlvD/EDD, N-terminal domain APT56_13035 IPR042096 Dihydroxy-acid dehydratase, C-terminal APT56_13035 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase APT56_13040 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein APT56_13040 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily APT56_13045 IPR042100 Bordetella uptake gene, domain 1 APT56_13045 IPR005064 Bordetella uptake gene APT56_13055 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA APT56_13055 IPR013785 Aldolase-type TIM barrel APT56_13055 IPR002220 DapA-like APT56_13055 IPR020625 Schiff base-forming aldolase, active site APT56_13055 IPR020624 Schiff base-forming aldolase, conserved site APT56_13060 IPR000524 Transcription regulator HTH, GntR APT56_13060 IPR000485 AsnC-type HTH domain APT56_13060 IPR036390 Winged helix DNA-binding domain superfamily APT56_13060 IPR008920 Transcription regulator FadR/GntR, C-terminal APT56_13060 IPR011711 GntR, C-terminal APT56_13060 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_13065 IPR005064 Bordetella uptake gene APT56_13065 IPR042100 Bordetella uptake gene, domain 1 APT56_13075 IPR005119 LysR, substrate-binding APT56_13075 IPR000847 Transcription regulator HTH, LysR APT56_13075 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_13075 IPR036390 Winged helix DNA-binding domain superfamily APT56_13090 IPR041698 Methyltransferase domain 25 APT56_13090 IPR023506 Trans-aconitate 2-methyltransferase APT56_13090 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal APT56_13090 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT56_13100 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_13100 IPR036390 Winged helix DNA-binding domain superfamily APT56_13100 IPR000847 Transcription regulator HTH, LysR APT56_13100 IPR005119 LysR, substrate-binding APT56_13105 IPR035959 RutC-like superfamily APT56_13105 IPR006175 YjgF/YER057c/UK114 family APT56_13105 IPR038743 YjgH-like APT56_13125 IPR036390 Winged helix DNA-binding domain superfamily APT56_13125 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_13125 IPR000847 Transcription regulator HTH, LysR APT56_13125 IPR005119 LysR, substrate-binding APT56_13130 IPR033694 Pyroglutamyl peptidase I, Cys active site APT56_13130 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily APT56_13130 IPR029762 Pyroglutamyl peptidase I, bacterial-type APT56_13130 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like APT56_13130 IPR000816 Peptidase C15, pyroglutamyl peptidase I APT56_13135 IPR000073 Alpha/beta hydrolase fold-1 APT56_13135 IPR029058 Alpha/Beta hydrolase fold APT56_13135 IPR000639 Epoxide hydrolase-like APT56_13135 IPR016292 Epoxide hydrolase APT56_13140 IPR042100 Bordetella uptake gene, domain 1 APT56_13140 IPR005064 Bordetella uptake gene APT56_13145 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APT56_13145 IPR001320 Ionotropic glutamate receptor APT56_13145 IPR018313 Solute-binding protein family 3, conserved site APT56_13150 IPR018313 Solute-binding protein family 3, conserved site APT56_13150 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APT56_13150 IPR001320 Ionotropic glutamate receptor APT56_13155 IPR016164 FAD-linked oxidase-like, C-terminal APT56_13155 IPR036318 FAD-binding, type PCMH-like superfamily APT56_13155 IPR004113 FAD-linked oxidase, C-terminal APT56_13155 IPR016166 FAD-binding domain, PCMH-type APT56_13155 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 APT56_13155 IPR006094 FAD linked oxidase, N-terminal APT56_13155 IPR004490 Glycolate oxidase subunit GlcD APT56_13165 IPR035906 MetI-like superfamily APT56_13165 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain APT56_13165 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_13185 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APT56_13185 IPR006233 Cystathionine beta-lyase, bacterial APT56_13185 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APT56_13185 IPR015424 Pyridoxal phosphate-dependent transferase APT56_13185 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme APT56_13195 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_13195 IPR036390 Winged helix DNA-binding domain superfamily APT56_13195 IPR000847 Transcription regulator HTH, LysR APT56_13195 IPR005119 LysR, substrate-binding APT56_13195 IPR037423 HTH-type transcriptional regulator CysB, PBP2 domain APT56_13205 IPR001307 Thiosulphate sulfurtransferase, conserved site APT56_13205 IPR036873 Rhodanese-like domain superfamily APT56_13205 IPR001763 Rhodanese-like domain APT56_13240 IPR013325 RNA polymerase sigma factor, region 2 APT56_13240 IPR013324 RNA polymerase sigma factor, region 3/4-like APT56_13240 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_13240 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 APT56_13240 IPR039425 RNA polymerase sigma-70 like APT56_13240 IPR014284 RNA polymerase sigma-70 like domain APT56_13240 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site APT56_13240 IPR007627 RNA polymerase sigma-70 region 2 APT56_13260 IPR016032 Signal transduction response regulator, C-terminal effector APT56_13260 IPR011006 CheY-like superfamily APT56_13260 IPR001789 Signal transduction response regulator, receiver domain APT56_13260 IPR000792 Transcription regulator LuxR, C-terminal APT56_13260 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_13265 IPR035965 PAS domain superfamily APT56_13265 IPR000700 PAS-associated, C-terminal APT56_13265 IPR005467 Histidine kinase domain APT56_13265 IPR000014 PAS domain APT56_13265 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily APT56_13265 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain APT56_13265 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APT56_13265 IPR003594 Histidine kinase/HSP90-like ATPase APT56_13265 IPR013767 PAS fold APT56_13265 IPR004358 Signal transduction histidine kinase-related protein, C-terminal APT56_13280 IPR005119 LysR, substrate-binding APT56_13280 IPR036390 Winged helix DNA-binding domain superfamily APT56_13280 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_13280 IPR000847 Transcription regulator HTH, LysR APT56_13285 IPR000534 Semialdehyde dehydrogenase, NAD-binding APT56_13285 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site APT56_13285 IPR036291 NAD(P)-binding domain superfamily APT56_13285 IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 APT56_13300 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_13300 IPR036390 Winged helix DNA-binding domain superfamily APT56_13300 IPR005119 LysR, substrate-binding APT56_13300 IPR000847 Transcription regulator HTH, LysR APT56_13305 IPR042099 AMP-dependent synthetase-like superfamily APT56_13305 IPR023456 Crotonobetaine/carnitine-CoA ligase CaiC APT56_13305 IPR000873 AMP-dependent synthetase/ligase APT56_13305 IPR020845 AMP-binding, conserved site APT56_13305 IPR025110 AMP-binding enzyme, C-terminal domain APT56_13310 IPR020846 Major facilitator superfamily domain APT56_13310 IPR005829 Sugar transporter, conserved site APT56_13310 IPR036259 MFS transporter superfamily APT56_13310 IPR005828 Major facilitator, sugar transporter-like APT56_13315 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III APT56_13315 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal APT56_13315 IPR016039 Thiolase-like APT56_13315 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 APT56_13325 IPR036249 Thioredoxin-like superfamily APT56_13325 IPR013766 Thioredoxin domain APT56_13325 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant APT56_13330 IPR013785 Aldolase-type TIM barrel APT56_13330 IPR004136 Nitronate monooxygenase APT56_13340 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain APT56_13340 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_13340 IPR035906 MetI-like superfamily APT56_13350 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_13350 IPR003593 AAA+ ATPase domain APT56_13350 IPR003439 ABC transporter-like APT56_13350 IPR017871 ABC transporter, conserved site APT56_13355 IPR000522 ABC transporter, permease protein, BtuC-like APT56_13355 IPR037294 ABC transporter, BtuC-like APT56_13360 IPR000522 ABC transporter, permease protein, BtuC-like APT56_13360 IPR037294 ABC transporter, BtuC-like APT56_13365 IPR023544 ABC transporter, vitamin B12-binding protein APT56_13365 IPR002491 ABC transporter periplasmic binding domain APT56_13370 IPR012910 TonB-dependent receptor, plug domain APT56_13370 IPR010917 TonB-dependent receptor, conserved site APT56_13370 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily APT56_13370 IPR000531 TonB-dependent receptor-like, beta-barrel APT56_13370 IPR010105 TonB-dependent siderophore receptor APT56_13370 IPR039423 TonB-dependent receptor-like APT56_13370 IPR011662 Secretin/TonB, short N-terminal domain APT56_13370 IPR037066 TonB-dependent receptor, plug domain superfamily APT56_13375 IPR036259 MFS transporter superfamily APT56_13375 IPR020846 Major facilitator superfamily domain APT56_13375 IPR011701 Major facilitator superfamily APT56_13375 IPR036390 Winged helix DNA-binding domain superfamily APT56_13375 IPR005829 Sugar transporter, conserved site APT56_13375 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_13375 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG APT56_13405 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase APT56_13405 IPR036188 FAD/NAD(P)-binding domain superfamily APT56_13410 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_13410 IPR005666 Sulphate transport system permease protein 1 APT56_13410 IPR005116 Transport-associated OB, type 1 APT56_13410 IPR008995 Molybdate/tungstate binding, C-terminal APT56_13410 IPR017871 ABC transporter, conserved site APT56_13410 IPR003439 ABC transporter-like APT56_13410 IPR003593 AAA+ ATPase domain APT56_13410 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal APT56_13415 IPR005226 UPF0014 family APT56_13420 IPR032816 SNARE associated Golgi protein APT56_13420 IPR032818 DedA family APT56_13425 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric APT56_13430 IPR001867 OmpR/PhoB-type DNA-binding domain APT56_13430 IPR039420 Transcriptional regulatory protein WalR-like APT56_13430 IPR001789 Signal transduction response regulator, receiver domain APT56_13430 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_13430 IPR011006 CheY-like superfamily APT56_13430 IPR016032 Signal transduction response regulator, C-terminal effector APT56_13435 IPR001721 Threonine dehydratase, ACT-like domain APT56_13435 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site APT56_13435 IPR001926 Pyridoxal-phosphate dependent enzyme APT56_13435 IPR038110 Threonine dehydratase, ACT-like domain superfamily APT56_13435 IPR005787 Threonine dehydratase, biosynthetic APT56_13435 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme APT56_13440 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_13440 IPR017871 ABC transporter, conserved site APT56_13440 IPR003593 AAA+ ATPase domain APT56_13440 IPR003439 ABC transporter-like APT56_13445 IPR008972 Cupredoxin APT56_13445 IPR014068 Azurin APT56_13445 IPR000923 Blue (type 1) copper domain APT56_13445 IPR028871 Blue (type 1) copper protein, binding site APT56_13450 IPR037294 ABC transporter, BtuC-like APT56_13450 IPR000522 ABC transporter, permease protein, BtuC-like APT56_13460 IPR011006 CheY-like superfamily APT56_13460 IPR001867 OmpR/PhoB-type DNA-binding domain APT56_13460 IPR001789 Signal transduction response regulator, receiver domain APT56_13460 IPR039420 Transcriptional regulatory protein WalR-like APT56_13460 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_13465 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain APT56_13465 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APT56_13465 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily APT56_13465 IPR005467 Histidine kinase domain APT56_13465 IPR003660 HAMP domain APT56_13465 IPR003594 Histidine kinase/HSP90-like ATPase APT56_13465 IPR004358 Signal transduction histidine kinase-related protein, C-terminal APT56_13470 IPR010916 TonB box, conserved site APT56_13470 IPR000531 TonB-dependent receptor-like, beta-barrel APT56_13470 IPR039423 TonB-dependent receptor-like APT56_13470 IPR037066 TonB-dependent receptor, plug domain superfamily APT56_13470 IPR010105 TonB-dependent siderophore receptor APT56_13470 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily APT56_13470 IPR030148 Catecholate siderophore receptor Fiu APT56_13470 IPR012910 TonB-dependent receptor, plug domain APT56_13475 IPR003593 AAA+ ATPase domain APT56_13475 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_13475 IPR017871 ABC transporter, conserved site APT56_13475 IPR003439 ABC transporter-like APT56_13475 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type APT56_13480 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain APT56_13480 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_13480 IPR035906 MetI-like superfamily APT56_13485 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_13485 IPR035906 MetI-like superfamily APT56_13485 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain APT56_13495 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APT56_13495 IPR018313 Solute-binding protein family 3, conserved site APT56_13500 IPR036390 Winged helix DNA-binding domain superfamily APT56_13500 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_13500 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily APT56_13500 IPR011663 UbiC transcription regulator-associated APT56_13500 IPR000524 Transcription regulator HTH, GntR APT56_13505 IPR002220 DapA-like APT56_13505 IPR013785 Aldolase-type TIM barrel APT56_13505 IPR017655 5-dehydro-4-deoxyglucarate dehydratase APT56_13510 IPR016161 Aldehyde/histidinol dehydrogenase APT56_13510 IPR016163 Aldehyde dehydrogenase, C-terminal APT56_13510 IPR016162 Aldehyde dehydrogenase, N-terminal APT56_13510 IPR015590 Aldehyde dehydrogenase domain APT56_13515 IPR002220 DapA-like APT56_13515 IPR013785 Aldolase-type TIM barrel APT56_13515 IPR017655 5-dehydro-4-deoxyglucarate dehydratase APT56_13520 IPR007392 D-galactarate/Altronate dehydratase, C-terminal APT56_13520 IPR017654 Galactarate dehydratase GarD-like APT56_13520 IPR013974 SAF domain APT56_13525 IPR042100 Bordetella uptake gene, domain 1 APT56_13525 IPR005064 Bordetella uptake gene APT56_13545 IPR032694 Copper transport protein C/D APT56_13545 IPR008457 Copper resistance protein D APT56_13555 IPR022955 GMP synthase APT56_13555 IPR017926 Glutamine amidotransferase APT56_13555 IPR025777 GMP synthetase ATP pyrophosphatase domain APT56_13555 IPR004739 GMP synthase, glutamine amidotransferase APT56_13555 IPR001674 GMP synthase, C-terminal APT56_13555 IPR029062 Class I glutamine amidotransferase-like APT56_13555 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT56_13565 IPR003593 AAA+ ATPase domain APT56_13565 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB APT56_13565 IPR017871 ABC transporter, conserved site APT56_13565 IPR003439 ABC transporter-like APT56_13565 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_13570 IPR035906 MetI-like superfamily APT56_13570 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_13575 IPR035906 MetI-like superfamily APT56_13575 IPR005889 Nitrate transport permease APT56_13575 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_13580 IPR011852 TRAP transporter solute receptor, TAXI family APT56_13590 IPR011401 Phosphoesterase, YvnB APT56_13590 IPR001322 Lamin tail domain APT56_13590 IPR036415 Lamin tail domain superfamily APT56_13590 IPR029052 Metallo-dependent phosphatase-like APT56_13590 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type APT56_13600 IPR005667 Sulphate ABC transporter permease protein 2 APT56_13600 IPR035906 MetI-like superfamily APT56_13600 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_13600 IPR011866 Sulphate ABC transporter, permease protein CysW APT56_13605 IPR011865 Sulphate ABC transporter, permease protein CysT APT56_13605 IPR005667 Sulphate ABC transporter permease protein 2 APT56_13605 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_13605 IPR035906 MetI-like superfamily APT56_13610 IPR005669 Thiosulphate/Sulfate-binding protein APT56_13610 IPR000957 Sulphate/thiosulphate-binding, conserved site APT56_13610 IPR034408 Sulphate/thiosulphate-binding site APT56_13620 IPR037066 TonB-dependent receptor, plug domain superfamily APT56_13620 IPR010916 TonB box, conserved site APT56_13620 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily APT56_13620 IPR010105 TonB-dependent siderophore receptor APT56_13620 IPR010917 TonB-dependent receptor, conserved site APT56_13620 IPR012910 TonB-dependent receptor, plug domain APT56_13620 IPR039426 Vitamin B12 transporter BtuB-like APT56_13620 IPR000531 TonB-dependent receptor-like, beta-barrel APT56_13630 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type APT56_13630 IPR003439 ABC transporter-like APT56_13630 IPR017871 ABC transporter, conserved site APT56_13630 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_13630 IPR003593 AAA+ ATPase domain APT56_13645 IPR010105 TonB-dependent siderophore receptor APT56_13645 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily APT56_13645 IPR010916 TonB box, conserved site APT56_13645 IPR000531 TonB-dependent receptor-like, beta-barrel APT56_13645 IPR037066 TonB-dependent receptor, plug domain superfamily APT56_13645 IPR012910 TonB-dependent receptor, plug domain APT56_13645 IPR039426 Vitamin B12 transporter BtuB-like APT56_13645 IPR010917 TonB-dependent receptor, conserved site APT56_13650 IPR036188 FAD/NAD(P)-binding domain superfamily APT56_13650 IPR028348 FAD dependent protein APT56_13655 IPR006047 Glycosyl hydrolase, family 13, catalytic domain APT56_13655 IPR017853 Glycoside hydrolase superfamily APT56_13655 IPR012767 Maltooligosyl trehalose synthase APT56_13660 IPR017853 Glycoside hydrolase superfamily APT56_13660 IPR003385 Glycoside hydrolase, family 77 APT56_13665 IPR012768 Malto-oligosyltrehalose trehalohydrolase APT56_13665 IPR013783 Immunoglobulin-like fold APT56_13665 IPR017853 Glycoside hydrolase superfamily APT56_13665 IPR013780 Glycosyl hydrolase, all-beta APT56_13665 IPR004193 Glycoside hydrolase, family 13, N-terminal APT56_13665 IPR014756 Immunoglobulin E-set APT56_13665 IPR006047 Glycosyl hydrolase, family 13, catalytic domain APT56_13665 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) APT56_13670 IPR014756 Immunoglobulin E-set APT56_13670 IPR011837 Glycogen debranching enzyme, GlgX type APT56_13670 IPR017853 Glycoside hydrolase superfamily APT56_13670 IPR013783 Immunoglobulin-like fold APT56_13670 IPR013780 Glycosyl hydrolase, all-beta APT56_13670 IPR006047 Glycosyl hydrolase, family 13, catalytic domain APT56_13670 IPR004193 Glycoside hydrolase, family 13, N-terminal APT56_13675 IPR013783 Immunoglobulin-like fold APT56_13675 IPR017853 Glycoside hydrolase superfamily APT56_13675 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB APT56_13675 IPR013780 Glycosyl hydrolase, all-beta APT56_13675 IPR004193 Glycoside hydrolase, family 13, N-terminal APT56_13675 IPR014756 Immunoglobulin E-set APT56_13675 IPR006047 Glycosyl hydrolase, family 13, catalytic domain APT56_13675 IPR037439 1,4-alpha-glucan-branching enzyme APT56_13675 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta APT56_13680 IPR006047 Glycosyl hydrolase, family 13, catalytic domain APT56_13680 IPR013780 Glycosyl hydrolase, all-beta APT56_13680 IPR012810 Trehalose synthase/alpha-amylase, N-terminal APT56_13680 IPR032091 Maltogenic Amylase, C-terminal APT56_13680 IPR017853 Glycoside hydrolase superfamily APT56_13685 IPR026585 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase APT56_13685 IPR013780 Glycosyl hydrolase, all-beta APT56_13685 IPR006047 Glycosyl hydrolase, family 13, catalytic domain APT56_13685 IPR017853 Glycoside hydrolase superfamily APT56_13685 IPR013783 Immunoglobulin-like fold APT56_13685 IPR021828 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, domain N/S APT56_13690 IPR013534 Starch synthase, catalytic domain APT56_13690 IPR001296 Glycosyl transferase, family 1 APT56_13690 IPR011835 Bacterial/plant glycogen synthase APT56_13695 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD APT56_13700 IPR030872 Cardiolipin synthase B APT56_13700 IPR025202 Phospholipase D-like domain APT56_13700 IPR001736 Phospholipase D/Transphosphatidylase APT56_13705 IPR036691 Endonuclease/exonuclease/phosphatase superfamily APT56_13705 IPR005135 Endonuclease/exonuclease/phosphatase APT56_13710 IPR004837 Sodium/calcium exchanger membrane region APT56_13710 IPR004713 Calcium/proton exchanger APT56_13720 IPR009078 Ferritin-like superfamily APT56_13720 IPR012347 Ferritin-like APT56_13720 IPR010287 Domain of unknown function DUF892 APT56_13730 IPR018189 Phosphoglucose isomerase, conserved site APT56_13730 IPR035476 Phosphoglucose isomerase, SIS domain 1 APT56_13730 IPR035482 Phosphoglucose isomerase, SIS domain 2 APT56_13730 IPR001672 Phosphoglucose isomerase (PGI) APT56_13740 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 APT56_13740 IPR006686 Mechanosensitive ion channel MscS, conserved site APT56_13740 IPR006685 Mechanosensitive ion channel MscS APT56_13740 IPR023408 Mechanosensitive ion channel MscS domain superfamily APT56_13740 IPR011066 Mechanosensitive ion channel MscS, C-terminal APT56_13740 IPR010920 LSM domain superfamily APT56_13760 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type APT56_13760 IPR005835 Nucleotidyl transferase domain APT56_13760 IPR029044 Nucleotide-diphospho-sugar transferases APT56_13765 IPR024712 Catalase, mono-functional, haem-containing, clade 2 APT56_13765 IPR011614 Catalase core domain APT56_13765 IPR037060 Catalase core domain superfamily APT56_13765 IPR041399 Large catalase, C-terminal domain APT56_13765 IPR010582 Catalase immune-responsive domain APT56_13765 IPR018028 Catalase, mono-functional, haem-containing APT56_13765 IPR024708 Catalase active site APT56_13765 IPR020835 Catalase superfamily APT56_13765 IPR029062 Class I glutamine amidotransferase-like APT56_13765 IPR002226 Catalase haem-binding site APT56_13770 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT56_13770 IPR006016 UspA APT56_13770 IPR006015 Universal stress protein A family APT56_13780 IPR006015 Universal stress protein A family APT56_13780 IPR006016 UspA APT56_13790 IPR029061 Thiamin diphosphate-binding fold APT56_13790 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II APT56_13790 IPR018970 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal APT56_13790 IPR019790 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, conserved site APT56_13790 IPR023962 Probable phosphoketolase APT56_13790 IPR019789 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, thiamine diphosphate binding site APT56_13790 IPR018969 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, C-terminal APT56_13790 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase APT56_13795 IPR022712 Beta-Casp domain APT56_13795 IPR001279 Metallo-beta-lactamase APT56_13795 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain APT56_13795 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like APT56_13800 IPR000644 CBS domain APT56_13810 IPR017171 Signal transduction histidine kinase, MctS APT56_13810 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain APT56_13810 IPR003594 Histidine kinase/HSP90-like ATPase APT56_13810 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APT56_13810 IPR033480 Single Cache domain 2 APT56_13815 IPR000792 Transcription regulator LuxR, C-terminal APT56_13815 IPR001789 Signal transduction response regulator, receiver domain APT56_13815 IPR016032 Signal transduction response regulator, C-terminal effector APT56_13815 IPR011006 CheY-like superfamily APT56_13820 IPR000595 Cyclic nucleotide-binding domain APT56_13820 IPR018490 Cyclic nucleotide-binding-like APT56_13820 IPR012318 Crp-type HTH domain APT56_13820 IPR014710 RmlC-like jelly roll fold APT56_13820 IPR018335 Transcription regulator HTH, Crp-type, conserved site APT56_13820 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_13820 IPR036390 Winged helix DNA-binding domain superfamily APT56_13835 IPR006015 Universal stress protein A family APT56_13835 IPR006016 UspA APT56_13835 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT56_13840 IPR001046 NRAMP family APT56_13850 IPR000788 Ribonucleotide reductase large subunit, C-terminal APT56_13850 IPR013509 Ribonucleotide reductase large subunit, N-terminal APT56_13850 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent APT56_13850 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal APT56_13850 IPR005144 ATP-cone domain APT56_13865 IPR002068 Alpha crystallin/Hsp20 domain APT56_13865 IPR008978 HSP20-like chaperone APT56_13885 IPR040075 Glutathione S-transferase Theta, N-terminal APT56_13885 IPR040077 Glutathione S-transferase Theta, C-terminal APT56_13885 IPR004046 Glutathione S-transferase, C-terminal APT56_13885 IPR036249 Thioredoxin-like superfamily APT56_13885 IPR036282 Glutathione S-transferase, C-terminal domain superfamily APT56_13885 IPR040079 Glutathione Transferase family APT56_13885 IPR004045 Glutathione S-transferase, N-terminal APT56_13885 IPR010987 Glutathione S-transferase, C-terminal-like APT56_13890 IPR001123 Amino acid exporter protein, LeuE-type APT56_13900 IPR001279 Metallo-beta-lactamase APT56_13900 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D APT56_13900 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like APT56_13910 IPR036188 FAD/NAD(P)-binding domain superfamily APT56_13910 IPR006231 Malate:quinone-oxidoreductase APT56_13920 IPR004736 MFS transporter, metabolite:H symporter APT56_13920 IPR005828 Major facilitator, sugar transporter-like APT56_13920 IPR020846 Major facilitator superfamily domain APT56_13920 IPR011701 Major facilitator superfamily APT56_13920 IPR005829 Sugar transporter, conserved site APT56_13920 IPR036259 MFS transporter superfamily APT56_13925 IPR023801 Histone deacetylase domain APT56_13925 IPR023696 Ureohydrolase domain superfamily APT56_13925 IPR037138 Histone deacetylase domain superfamily APT56_13925 IPR000286 Histone deacetylase family APT56_13930 IPR005119 LysR, substrate-binding APT56_13930 IPR000847 Transcription regulator HTH, LysR APT56_13930 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_13930 IPR036390 Winged helix DNA-binding domain superfamily APT56_13935 IPR036249 Thioredoxin-like superfamily APT56_13935 IPR004046 Glutathione S-transferase, C-terminal APT56_13935 IPR010987 Glutathione S-transferase, C-terminal-like APT56_13935 IPR004045 Glutathione S-transferase, N-terminal APT56_13935 IPR040079 Glutathione Transferase family APT56_13935 IPR036282 Glutathione S-transferase, C-terminal domain superfamily APT56_13960 IPR042100 Bordetella uptake gene, domain 1 APT56_13960 IPR005064 Bordetella uptake gene APT56_13965 IPR011234 Fumarylacetoacetase-like, C-terminal APT56_13965 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily APT56_13965 IPR012690 2-oxo-hepta-4-ene-1,7-dioic acid hydratase APT56_13975 IPR036188 FAD/NAD(P)-binding domain superfamily APT56_13975 IPR023753 FAD/NAD(P)-binding domain APT56_13975 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily APT56_13975 IPR028202 Reductase, C-terminal APT56_13980 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily APT56_13980 IPR017941 Rieske [2Fe-2S] iron-sulphur domain APT56_13985 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit APT56_13985 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site APT56_13985 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily APT56_13985 IPR017941 Rieske [2Fe-2S] iron-sulphur domain APT56_13985 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain APT56_13990 IPR032710 NTF2-like domain superfamily APT56_13990 IPR000391 Ring-hydroxylating dioxygenase beta subunit APT56_14000 IPR036291 NAD(P)-binding domain superfamily APT56_14000 IPR003462 Ornithine cyclodeaminase/mu-crystallin APT56_14000 IPR023401 Ornithine cyclodeaminase, N-terminal APT56_14005 IPR011234 Fumarylacetoacetase-like, C-terminal APT56_14005 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily APT56_14020 IPR006076 FAD dependent oxidoreductase APT56_14020 IPR036188 FAD/NAD(P)-binding domain superfamily APT56_14025 IPR006056 RidA family APT56_14025 IPR019897 RidA, conserved site APT56_14025 IPR035959 RutC-like superfamily APT56_14025 IPR006175 YjgF/YER057c/UK114 family APT56_14030 IPR010799 Microcystin LR degradation protein MlrC, C-terminal APT56_14030 IPR009197 Microcystin LR degradation protein MlrC APT56_14030 IPR015995 Microcystin LR degradation protein MlrC, N-terminal APT56_14035 IPR030678 Peptide/nickel binding protein, MppA-type APT56_14035 IPR039424 Solute-binding protein family 5 APT56_14035 IPR023765 Solute-binding protein family 5, conserved site APT56_14035 IPR000914 Solute-binding protein family 5 domain APT56_14035 IPR006311 Twin-arginine translocation pathway, signal sequence APT56_14040 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_14040 IPR035906 MetI-like superfamily APT56_14045 IPR035906 MetI-like superfamily APT56_14045 IPR025966 Oligopeptide transport permease C-like, N-terminal domain APT56_14045 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_14050 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_14050 IPR003593 AAA+ ATPase domain APT56_14050 IPR003439 ABC transporter-like APT56_14050 IPR017871 ABC transporter, conserved site APT56_14050 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal APT56_14055 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal APT56_14055 IPR003593 AAA+ ATPase domain APT56_14055 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_14055 IPR003439 ABC transporter-like APT56_14055 IPR017871 ABC transporter, conserved site APT56_14060 IPR011059 Metal-dependent hydrolase, composite domain superfamily APT56_14060 IPR032466 Metal-dependent hydrolase APT56_14060 IPR013108 Amidohydrolase 3 APT56_14060 IPR023100 D-aminoacylase, insert domain superfamily APT56_14070 IPR002293 Amino acid/polyamine transporter I APT56_14080 IPR031321 Uncharacterised conserved protein UCP012641, putative zinc-binding metallo-peptidase APT56_14080 IPR011201 Zinc-ribbon domain, bacteria APT56_14085 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily APT56_14085 IPR029062 Class I glutamine amidotransferase-like APT56_14085 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal APT56_14085 IPR040449 LD-carboxypeptidase, N-terminal APT56_14085 IPR040921 LD-carboxypeptidase, C-terminal APT56_14085 IPR003507 Peptidase family S66 APT56_14095 IPR002549 Transmembrane protein TqsA-like APT56_14125 IPR030930 Adhesin of bacterial autotransporter system APT56_14125 IPR011050 Pectin lyase fold/virulence factor APT56_14125 IPR006315 Outer membrane autotransporter barrel APT56_14125 IPR024973 ESPR domain APT56_14125 IPR036709 Autotransporter beta-domain superfamily APT56_14125 IPR005546 Autotransporter beta-domain APT56_14125 IPR012332 P22 tailspike-like, C-terminal domain superfamily APT56_14155 IPR029787 Nucleotide cyclase APT56_14155 IPR012292 Globin/Protoglobin APT56_14155 IPR009050 Globin-like superfamily APT56_14155 IPR000160 GGDEF domain APT56_14155 IPR039435 Diguanylate cyclase DosC, globin sensor domain APT56_14165 IPR015358 Transcription regulator MerR, DNA binding APT56_14165 IPR009061 Putative DNA-binding domain superfamily APT56_14165 IPR010211 Redox-sensitive transcriptional activator SoxR APT56_14165 IPR000551 MerR-type HTH domain APT56_14170 IPR000160 GGDEF domain APT56_14170 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region APT56_14170 IPR029787 Nucleotide cyclase APT56_14190 IPR002823 Protein of unknown function DUF112, transmembrane APT56_14200 IPR011701 Major facilitator superfamily APT56_14200 IPR036259 MFS transporter superfamily APT56_14200 IPR023697 Multidrug resistance protein MdtL APT56_14200 IPR020846 Major facilitator superfamily domain APT56_14210 IPR005119 LysR, substrate-binding APT56_14210 IPR036390 Winged helix DNA-binding domain superfamily APT56_14210 IPR000847 Transcription regulator HTH, LysR APT56_14210 IPR037416 Nodulation protein D, PBP2 APT56_14210 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_14225 IPR003660 HAMP domain APT56_14225 IPR004358 Signal transduction histidine kinase-related protein, C-terminal APT56_14225 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily APT56_14225 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain APT56_14225 IPR005467 Histidine kinase domain APT56_14225 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APT56_14225 IPR003594 Histidine kinase/HSP90-like ATPase APT56_14230 IPR013425 Autotransporter-associated beta strand repeat APT56_14230 IPR036709 Autotransporter beta-domain superfamily APT56_14230 IPR013425 Autotransporter-associated beta strand repeat APT56_14230 IPR011050 Pectin lyase fold/virulence factor APT56_14230 IPR012332 P22 tailspike-like, C-terminal domain superfamily APT56_14230 IPR006315 Outer membrane autotransporter barrel APT56_14230 IPR005546 Autotransporter beta-domain APT56_14230 IPR036709 Autotransporter beta-domain superfamily APT56_14230 IPR005546 Autotransporter beta-domain APT56_14230 IPR006315 Outer membrane autotransporter barrel APT56_14230 IPR012332 P22 tailspike-like, C-terminal domain superfamily APT56_14230 IPR011050 Pectin lyase fold/virulence factor APT56_14235 IPR036318 FAD-binding, type PCMH-like superfamily APT56_14235 IPR005170 Transporter-associated domain APT56_14235 IPR016169 FAD-binding, type PCMH, subdomain 2 APT56_14235 IPR000644 CBS domain APT56_14235 IPR005496 Integral membrane protein TerC APT56_14240 IPR027056 Gluconate 2-dehydrogenase subunit 3 APT56_14240 IPR006311 Twin-arginine translocation pathway, signal sequence APT56_14245 IPR036188 FAD/NAD(P)-binding domain superfamily APT56_14245 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal APT56_14245 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal APT56_14250 IPR009056 Cytochrome c-like domain APT56_14250 IPR036909 Cytochrome c-like domain superfamily APT56_14250 IPR024167 Cytochrome c4-like APT56_14260 IPR003416 MgtC/SapB/SrpB/YhiD family APT56_14270 IPR000531 TonB-dependent receptor-like, beta-barrel APT56_14270 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily APT56_14270 IPR037066 TonB-dependent receptor, plug domain superfamily APT56_14270 IPR012910 TonB-dependent receptor, plug domain APT56_14270 IPR039423 TonB-dependent receptor-like APT56_14270 IPR010105 TonB-dependent siderophore receptor APT56_14285 IPR000160 GGDEF domain APT56_14285 IPR001633 EAL domain APT56_14285 IPR035965 PAS domain superfamily APT56_14285 IPR000014 PAS domain APT56_14285 IPR029787 Nucleotide cyclase APT56_14285 IPR035919 EAL domain superfamily APT56_14285 IPR005330 MHYT domain APT56_14290 IPR032692 Integral membrane protein YccS, N-terminal APT56_14300 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain APT56_14300 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain APT56_14300 IPR036291 NAD(P)-binding domain superfamily APT56_14310 IPR002818 DJ-1/PfpI APT56_14310 IPR029062 Class I glutamine amidotransferase-like APT56_14310 IPR006286 Deglycase PfpI APT56_14330 IPR020904 Short-chain dehydrogenase/reductase, conserved site APT56_14330 IPR002347 Short-chain dehydrogenase/reductase SDR APT56_14330 IPR036291 NAD(P)-binding domain superfamily APT56_14360 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_14360 IPR025944 Sigma-54 interaction domain, conserved site APT56_14360 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 APT56_14360 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 APT56_14360 IPR002078 RNA polymerase sigma factor 54 interaction domain APT56_14360 IPR001789 Signal transduction response regulator, receiver domain APT56_14360 IPR002197 DNA binding HTH domain, Fis-type APT56_14360 IPR009057 Homeobox-like domain superfamily APT56_14360 IPR003593 AAA+ ATPase domain APT56_14360 IPR011006 CheY-like superfamily APT56_14365 IPR011006 CheY-like superfamily APT56_14365 IPR029995 Transcriptional activator SfnR/FlbD APT56_14365 IPR003593 AAA+ ATPase domain APT56_14365 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 APT56_14365 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 APT56_14365 IPR025944 Sigma-54 interaction domain, conserved site APT56_14365 IPR001789 Signal transduction response regulator, receiver domain APT56_14365 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_14365 IPR002197 DNA binding HTH domain, Fis-type APT56_14365 IPR009057 Homeobox-like domain superfamily APT56_14365 IPR002078 RNA polymerase sigma factor 54 interaction domain APT56_14370 IPR000394 RNA polymerase sigma factor 54 APT56_14370 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily APT56_14370 IPR007634 RNA polymerase sigma factor 54, DNA-binding APT56_14370 IPR007046 RNA polymerase sigma factor 54, core-binding domain APT56_14380 IPR001789 Signal transduction response regulator, receiver domain APT56_14380 IPR003594 Histidine kinase/HSP90-like ATPase APT56_14380 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APT56_14380 IPR005467 Histidine kinase domain APT56_14380 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily APT56_14380 IPR013656 PAS fold-4 APT56_14380 IPR000014 PAS domain APT56_14380 IPR035965 PAS domain superfamily APT56_14380 IPR004358 Signal transduction histidine kinase-related protein, C-terminal APT56_14380 IPR011006 CheY-like superfamily APT56_14380 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain APT56_14390 IPR023559 Flagellar transcriptional activator FlhD APT56_14390 IPR036194 Flagellar transcriptional activator FlhD superfamily APT56_14395 IPR036259 MFS transporter superfamily APT56_14395 IPR020846 Major facilitator superfamily domain APT56_14395 IPR011701 Major facilitator superfamily APT56_14400 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_14400 IPR000847 Transcription regulator HTH, LysR APT56_14400 IPR005119 LysR, substrate-binding APT56_14400 IPR037410 HTH-type transcriptional regulator BudR, PBP2 domain APT56_14400 IPR036390 Winged helix DNA-binding domain superfamily APT56_14410 IPR005330 MHYT domain APT56_14410 IPR029787 Nucleotide cyclase APT56_14410 IPR001633 EAL domain APT56_14410 IPR000160 GGDEF domain APT56_14410 IPR035965 PAS domain superfamily APT56_14410 IPR035919 EAL domain superfamily APT56_14415 IPR013785 Aldolase-type TIM barrel APT56_14415 IPR006219 DHAP synthase, class 1 APT56_14415 IPR006218 DAHP synthetase I/KDSA APT56_14420 IPR036188 FAD/NAD(P)-binding domain superfamily APT56_14420 IPR006076 FAD dependent oxidoreductase APT56_14420 IPR023080 D-amino acid dehydrogenase DadA APT56_14435 IPR001867 OmpR/PhoB-type DNA-binding domain APT56_14435 IPR016032 Signal transduction response regulator, C-terminal effector APT56_14435 IPR001789 Signal transduction response regulator, receiver domain APT56_14435 IPR039420 Transcriptional regulatory protein WalR-like APT56_14435 IPR011006 CheY-like superfamily APT56_14435 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_14440 IPR040442 Pyruvate kinase-like domain superfamily APT56_14440 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily APT56_14440 IPR011206 Citrate lyase beta subunit-like APT56_14440 IPR005000 HpcH/HpaI aldolase/citrate lyase domain APT56_14445 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_14445 IPR017871 ABC transporter, conserved site APT56_14445 IPR003593 AAA+ ATPase domain APT56_14445 IPR003439 ABC transporter-like APT56_14445 IPR032781 ABC-transporter extension domain APT56_14455 IPR033177 Phosphatidylserine decarboxylase APT56_14455 IPR003817 Phosphatidylserine decarboxylase-related APT56_14455 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 APT56_14480 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site APT56_14480 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent APT56_14480 IPR000262 FMN-dependent dehydrogenase APT56_14480 IPR037396 FMN hydroxy acid dehydrogenase domain APT56_14480 IPR013785 Aldolase-type TIM barrel APT56_14485 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type APT56_14485 IPR029052 Metallo-dependent phosphatase-like APT56_14495 IPR011701 Major facilitator superfamily APT56_14495 IPR023495 Sugar efflux transporter, putative APT56_14495 IPR020846 Major facilitator superfamily domain APT56_14495 IPR036259 MFS transporter superfamily APT56_14500 IPR000160 GGDEF domain APT56_14500 IPR029787 Nucleotide cyclase APT56_14500 IPR033416 Periplasmic sensor domain CHASE7 APT56_14505 IPR004872 Lipoprotein NlpA family APT56_14510 IPR006035 Ureohydrolase APT56_14510 IPR020855 Ureohydrolase, manganese-binding site APT56_14510 IPR014033 Arginase APT56_14510 IPR023696 Ureohydrolase domain superfamily APT56_14525 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site APT56_14525 IPR011032 GroES-like superfamily APT56_14525 IPR036291 NAD(P)-binding domain superfamily APT56_14525 IPR020843 Polyketide synthase, enoylreductase domain APT56_14525 IPR013149 Alcohol dehydrogenase, C-terminal APT56_14525 IPR013154 Alcohol dehydrogenase, N-terminal APT56_14530 IPR006696 Protein of unknown function DUF423 APT56_14535 IPR000620 EamA domain APT56_14545 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase APT56_14545 IPR011042 Six-bladed beta-propeller, TolB-like APT56_14545 IPR012938 Glucose/Sorbosone dehydrogenase APT56_14550 IPR036249 Thioredoxin-like superfamily APT56_14550 IPR036282 Glutathione S-transferase, C-terminal domain superfamily APT56_14550 IPR004045 Glutathione S-transferase, N-terminal APT56_14550 IPR040079 Glutathione Transferase family APT56_14550 IPR004046 Glutathione S-transferase, C-terminal APT56_14550 IPR010987 Glutathione S-transferase, C-terminal-like APT56_14555 IPR036390 Winged helix DNA-binding domain superfamily APT56_14555 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_14555 IPR000847 Transcription regulator HTH, LysR APT56_14555 IPR005119 LysR, substrate-binding APT56_14555 IPR037414 Transcriptional activator protein LysR, PBP2 domain APT56_14560 IPR042100 Bordetella uptake gene, domain 1 APT56_14560 IPR005064 Bordetella uptake gene APT56_14565 IPR023100 D-aminoacylase, insert domain superfamily APT56_14565 IPR032466 Metal-dependent hydrolase APT56_14565 IPR013108 Amidohydrolase 3 APT56_14565 IPR011059 Metal-dependent hydrolase, composite domain superfamily APT56_14570 IPR015942 Asp/Glu/hydantoin racemase APT56_14570 IPR001920 Asp/Glu racemase APT56_14570 IPR004380 Aspartate racemase APT56_14570 IPR033134 Asp/Glu racemase, active site 2 APT56_14570 IPR018187 Asp/Glu racemase, active site 1 APT56_14580 IPR003593 AAA+ ATPase domain APT56_14580 IPR003439 ABC transporter-like APT56_14580 IPR017871 ABC transporter, conserved site APT56_14580 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_14580 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein APT56_14585 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal APT56_14585 IPR017871 ABC transporter, conserved site APT56_14585 IPR003439 ABC transporter-like APT56_14585 IPR003593 AAA+ ATPase domain APT56_14585 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_14590 IPR001851 ABC transporter, permease APT56_14590 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal APT56_14595 IPR001851 ABC transporter, permease APT56_14600 IPR028081 Leucine-binding protein domain APT56_14600 IPR028082 Periplasmic binding protein-like I APT56_14600 IPR000709 Leu/Ile/Val-binding protein APT56_14605 IPR003744 Queuosine precursor transporter APT56_14610 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal APT56_14610 IPR036291 NAD(P)-binding domain superfamily APT56_14610 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain APT56_14610 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily APT56_14610 IPR000304 Pyrroline-5-carboxylate reductase APT56_14615 IPR006061 Solute-binding family 1, conserved site APT56_14615 IPR006059 Bacterial extracellular solute-binding protein APT56_14620 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_14620 IPR035906 MetI-like superfamily APT56_14625 IPR030165 sn-Glycerol-3-phosphate transport system permease protein UgpE APT56_14625 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_14625 IPR035906 MetI-like superfamily APT56_14630 IPR017922 sn-Glycerol-3-phosphate import ATP-binding protein UgpC APT56_14630 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_14630 IPR040582 MalK, OB fold domain APT56_14630 IPR008995 Molybdate/tungstate binding, C-terminal APT56_14630 IPR017871 ABC transporter, conserved site APT56_14630 IPR003439 ABC transporter-like APT56_14630 IPR003593 AAA+ ATPase domain APT56_14645 IPR003594 Histidine kinase/HSP90-like ATPase APT56_14645 IPR003660 HAMP domain APT56_14645 IPR004358 Signal transduction histidine kinase-related protein, C-terminal APT56_14645 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APT56_14645 IPR005467 Histidine kinase domain APT56_14645 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily APT56_14645 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain APT56_14650 IPR011006 CheY-like superfamily APT56_14650 IPR001867 OmpR/PhoB-type DNA-binding domain APT56_14650 IPR001789 Signal transduction response regulator, receiver domain APT56_14650 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_14650 IPR016032 Signal transduction response regulator, C-terminal effector APT56_14650 IPR039420 Transcriptional regulatory protein WalR-like APT56_14655 IPR000709 Leu/Ile/Val-binding protein APT56_14655 IPR028082 Periplasmic binding protein-like I APT56_14655 IPR028081 Leucine-binding protein domain APT56_14665 IPR002022 Pectate lyase APT56_14665 IPR011050 Pectin lyase fold/virulence factor APT56_14665 IPR012334 Pectin lyase fold APT56_14670 IPR013026 Tetratricopeptide repeat-containing domain APT56_14670 IPR011990 Tetratricopeptide-like helical domain superfamily APT56_14690 IPR003715 Polysaccharide export protein APT56_14695 IPR001296 Glycosyl transferase, family 1 APT56_14700 IPR011990 Tetratricopeptide-like helical domain superfamily APT56_14705 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal APT56_14705 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal APT56_14705 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation APT56_14705 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily APT56_14705 IPR017476 UDP-glucose/GDP-mannose dehydrogenase APT56_14705 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase APT56_14705 IPR036291 NAD(P)-binding domain superfamily APT56_14705 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily APT56_14710 IPR012347 Ferritin-like APT56_14710 IPR002177 DNA-binding protein Dps APT56_14710 IPR023188 DNA-binding protein Dps, conserved site APT56_14710 IPR009078 Ferritin-like superfamily APT56_14710 IPR008331 Ferritin/DPS protein domain APT56_14715 IPR005119 LysR, substrate-binding APT56_14715 IPR036390 Winged helix DNA-binding domain superfamily APT56_14715 IPR000847 Transcription regulator HTH, LysR APT56_14715 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_14720 IPR004609 ATP-dependent DNA helicase RecG APT56_14720 IPR012340 Nucleic acid-binding, OB-fold APT56_14720 IPR001650 Helicase, C-terminal APT56_14720 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_14720 IPR011545 DEAD/DEAH box helicase domain APT56_14720 IPR033454 RecG, wedge domain APT56_14720 IPR014001 Helicase superfamily 1/2, ATP-binding domain APT56_14725 IPR006056 RidA family APT56_14725 IPR006175 YjgF/YER057c/UK114 family APT56_14725 IPR019897 RidA, conserved site APT56_14725 IPR035959 RutC-like superfamily APT56_14740 IPR036390 Winged helix DNA-binding domain superfamily APT56_14740 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_14740 IPR037403 HTH-type transcriptional regulator CynR, PBP2 domain APT56_14740 IPR000847 Transcription regulator HTH, LysR APT56_14740 IPR005119 LysR, substrate-binding APT56_14755 IPR042100 Bordetella uptake gene, domain 1 APT56_14755 IPR005064 Bordetella uptake gene APT56_14760 IPR033892 Ferredoxin--NADP reductase, bacteria APT56_14760 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase APT56_14760 IPR017927 FAD-binding domain, ferredoxin reductase-type APT56_14760 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain APT56_14760 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain APT56_14760 IPR001433 Oxidoreductase FAD/NAD(P)-binding APT56_14760 IPR017938 Riboflavin synthase-like beta-barrel APT56_14765 IPR026045 Ferric binding protein APT56_14765 IPR006059 Bacterial extracellular solute-binding protein APT56_14770 IPR011867 Molybdate ABC transporter, permease protein APT56_14770 IPR035906 MetI-like superfamily APT56_14770 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_14775 IPR003439 ABC transporter-like APT56_14775 IPR017871 ABC transporter, conserved site APT56_14775 IPR008995 Molybdate/tungstate binding, C-terminal APT56_14775 IPR003593 AAA+ ATPase domain APT56_14775 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit APT56_14775 IPR013611 Transport-associated OB, type 2 APT56_14775 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA APT56_14775 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_14780 IPR042100 Bordetella uptake gene, domain 1 APT56_14780 IPR006311 Twin-arginine translocation pathway, signal sequence APT56_14780 IPR005064 Bordetella uptake gene APT56_14785 IPR036025 tRNA-splicing ligase RtcB-like superfamily APT56_14790 IPR017509 Putative peptide chain release factor H APT56_14790 IPR000352 Peptide chain release factor class I APT56_14795 IPR003829 Pirin, N-terminal domain APT56_14795 IPR014710 RmlC-like jelly roll fold APT56_14795 IPR011051 RmlC-like cupin domain superfamily APT56_14795 IPR012093 Pirin APT56_14795 IPR008778 Pirin, C-terminal domain APT56_14800 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain APT56_14800 IPR011051 RmlC-like cupin domain superfamily APT56_14800 IPR012093 Pirin APT56_14800 IPR014710 RmlC-like jelly roll fold APT56_14800 IPR003829 Pirin, N-terminal domain APT56_14805 IPR000847 Transcription regulator HTH, LysR APT56_14805 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_14805 IPR036390 Winged helix DNA-binding domain superfamily APT56_14805 IPR005119 LysR, substrate-binding APT56_14810 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_14810 IPR001789 Signal transduction response regulator, receiver domain APT56_14810 IPR002078 RNA polymerase sigma factor 54 interaction domain APT56_14810 IPR002197 DNA binding HTH domain, Fis-type APT56_14810 IPR003593 AAA+ ATPase domain APT56_14810 IPR011006 CheY-like superfamily APT56_14810 IPR009057 Homeobox-like domain superfamily APT56_14810 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 APT56_14810 IPR010114 DNA-binding transcriptional regulator NtrC APT56_14810 IPR025944 Sigma-54 interaction domain, conserved site APT56_14810 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 APT56_14815 IPR035965 PAS domain superfamily APT56_14815 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain APT56_14815 IPR005467 Histidine kinase domain APT56_14815 IPR000014 PAS domain APT56_14815 IPR003594 Histidine kinase/HSP90-like ATPase APT56_14815 IPR004358 Signal transduction histidine kinase-related protein, C-terminal APT56_14815 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily APT56_14815 IPR013767 PAS fold APT56_14815 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APT56_14825 IPR034505 Anaerobic coproporphyrinogen-III oxidase APT56_14825 IPR006638 Elp3/MiaB/NifB APT56_14825 IPR010723 HemN, C-terminal APT56_14825 IPR004559 Heme chaperone HemW-like APT56_14825 IPR007197 Radical SAM APT56_14825 IPR023404 Radical SAM, alpha/beta horseshoe APT56_14830 IPR020922 dITP/XTP pyrophosphatase APT56_14830 IPR002637 Ham1-like protein APT56_14830 IPR029001 Inosine triphosphate pyrophosphatase-like APT56_14835 IPR005330 MHYT domain APT56_14835 IPR001633 EAL domain APT56_14835 IPR035919 EAL domain superfamily APT56_14835 IPR000160 GGDEF domain APT56_14835 IPR029787 Nucleotide cyclase APT56_14855 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily APT56_14855 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily APT56_14855 IPR006089 Acyl-CoA dehydrogenase, conserved site APT56_14855 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain APT56_14855 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal APT56_14855 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal APT56_14855 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal APT56_14865 IPR018336 Ribonuclease PH, conserved site APT56_14865 IPR002381 Ribonuclease PH, bacterial-type APT56_14865 IPR001247 Exoribonuclease, phosphorolytic domain 1 APT56_14865 IPR027408 PNPase/RNase PH domain superfamily APT56_14865 IPR015847 Exoribonuclease, phosphorolytic domain 2 APT56_14865 IPR036345 Exoribonuclease, PH domain 2 superfamily APT56_14865 IPR020568 Ribosomal protein S5 domain 2-type fold APT56_14870 IPR013551 Domain of unknown function DUF1732 APT56_14870 IPR013527 YicC-like, N-terminal APT56_14870 IPR005229 Conserved hypothetical protein CHP00255 APT56_14875 IPR004841 Amino acid permease/ SLC12A domain APT56_14875 IPR004840 Amino acid permease, conserved site APT56_14880 IPR018953 AMP nucleoside phosphorylase, N-terminal APT56_14880 IPR000845 Nucleoside phosphorylase domain APT56_14880 IPR035994 Nucleoside phosphorylase superfamily APT56_14880 IPR037109 AMP nucleoside phosphorylase, N-terminal domain superfamily APT56_14880 IPR011271 AMP nucleosidase APT56_14890 IPR037066 TonB-dependent receptor, plug domain superfamily APT56_14890 IPR000531 TonB-dependent receptor-like, beta-barrel APT56_14890 IPR012910 TonB-dependent receptor, plug domain APT56_14890 IPR039426 Vitamin B12 transporter BtuB-like APT56_14895 IPR038765 Papain-like cysteine peptidase superfamily APT56_14895 IPR000064 Endopeptidase, NLPC/P60 domain APT56_14900 IPR012334 Pectin lyase fold APT56_14900 IPR011050 Pectin lyase fold/virulence factor APT56_14900 IPR025157 Hemagglutinin repeat APT56_14900 IPR040559 tRNA nuclease CdiA, C-terminal APT56_14900 IPR033806 CDI toxin, Bp1026b-like APT56_14900 IPR008638 Filamentous haemagglutinin, N-terminal APT56_14900 IPR008619 Filamentous haemagglutinin repeat APT56_14900 IPR024973 ESPR domain APT56_14905 IPR002347 Short-chain dehydrogenase/reductase SDR APT56_14905 IPR020904 Short-chain dehydrogenase/reductase, conserved site APT56_14905 IPR036291 NAD(P)-binding domain superfamily APT56_14910 IPR024167 Cytochrome c4-like APT56_14910 IPR036909 Cytochrome c-like domain superfamily APT56_14910 IPR009056 Cytochrome c-like domain APT56_14915 IPR036909 Cytochrome c-like domain superfamily APT56_14915 IPR009056 Cytochrome c-like domain APT56_14920 IPR020590 Guanylate kinase, conserved site APT56_14920 IPR017665 Guanylate kinase APT56_14920 IPR008145 Guanylate kinase/L-type calcium channel beta subunit APT56_14920 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_14920 IPR008144 Guanylate kinase-like domain APT56_14925 IPR012293 RNA polymerase subunit, RPB6/omega APT56_14925 IPR006110 RNA polymerase, subunit omega/K/RPB6 APT56_14925 IPR036161 RPB6/omega subunit-like superfamily APT56_14925 IPR003716 DNA-directed RNA polymerase, omega subunit APT56_14930 IPR007685 RelA/SpoT APT56_14930 IPR033655 RelA, TGS domain APT56_14930 IPR012676 TGS-like APT56_14930 IPR012675 Beta-grasp domain superfamily APT56_14930 IPR002912 ACT domain APT56_14930 IPR004811 RelA/SpoT family APT56_14930 IPR004095 TGS APT56_14930 IPR003607 HD/PDEase domain APT56_14935 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_14935 IPR003439 ABC transporter-like APT56_14935 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type APT56_14935 IPR017871 ABC transporter, conserved site APT56_14935 IPR003593 AAA+ ATPase domain APT56_14940 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain APT56_14940 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_14940 IPR035906 MetI-like superfamily APT56_14945 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APT56_14945 IPR018313 Solute-binding protein family 3, conserved site APT56_14945 IPR001320 Ionotropic glutamate receptor APT56_14955 IPR008040 Hydantoinaseoxoprolinase, N-terminal APT56_14955 IPR002821 Hydantoinase A/oxoprolinase APT56_14965 IPR015375 NADH pyrophosphatase-like, N-terminal APT56_14965 IPR015797 NUDIX hydrolase-like domain superfamily APT56_14965 IPR000086 NUDIX hydrolase domain APT56_14965 IPR015376 Zinc ribbon, NADH pyrophosphatase APT56_14965 IPR022925 NADH pyrophosphatase NudC APT56_14980 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit APT56_14980 IPR004681 TRAP transporter large membrane protein DctM APT56_14985 IPR002299 Porin, Neisseria sp. type APT56_14985 IPR001702 Porin, Gram-negative type APT56_14985 IPR033900 Porin domain, Gram-negative type APT56_14985 IPR023614 Porin domain superfamily APT56_14990 IPR003439 ABC transporter-like APT56_14990 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_14990 IPR017871 ABC transporter, conserved site APT56_14990 IPR003593 AAA+ ATPase domain APT56_14990 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein APT56_14995 IPR003593 AAA+ ATPase domain APT56_14995 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal APT56_14995 IPR003439 ABC transporter-like APT56_14995 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_14995 IPR017871 ABC transporter, conserved site APT56_15005 IPR001851 ABC transporter, permease APT56_15015 IPR009906 D-glutamate cyclase APT56_15015 IPR038021 Putative hydro-lyase APT56_15015 IPR016938 Uncharacterised protein family UPF0317 APT56_15020 IPR005119 LysR, substrate-binding APT56_15020 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_15020 IPR036390 Winged helix DNA-binding domain superfamily APT56_15020 IPR037403 HTH-type transcriptional regulator CynR, PBP2 domain APT56_15020 IPR000847 Transcription regulator HTH, LysR APT56_15025 IPR036928 Amidase signature (AS) superfamily APT56_15025 IPR023631 Amidase signature domain APT56_15025 IPR000120 Amidase APT56_15035 IPR004681 TRAP transporter large membrane protein DctM APT56_15035 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit APT56_15050 IPR036390 Winged helix DNA-binding domain superfamily APT56_15050 IPR005119 LysR, substrate-binding APT56_15050 IPR037403 HTH-type transcriptional regulator CynR, PBP2 domain APT56_15050 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_15050 IPR000847 Transcription regulator HTH, LysR APT56_15060 IPR010758 Trans-2-enoyl-CoA reductase APT56_15060 IPR024906 Enoyl reductase FAD binding domain APT56_15060 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative APT56_15065 IPR036412 HAD-like superfamily APT56_15065 IPR023214 HAD superfamily APT56_15070 IPR005119 LysR, substrate-binding APT56_15070 IPR000847 Transcription regulator HTH, LysR APT56_15070 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_15070 IPR036390 Winged helix DNA-binding domain superfamily APT56_15075 IPR003593 AAA+ ATPase domain APT56_15075 IPR015853 ABC transporter, ferric cation import, FbpC APT56_15075 IPR013611 Transport-associated OB, type 2 APT56_15075 IPR008995 Molybdate/tungstate binding, C-terminal APT56_15075 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_15075 IPR003439 ABC transporter-like APT56_15075 IPR017871 ABC transporter, conserved site APT56_15080 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_15080 IPR035906 MetI-like superfamily APT56_15090 IPR003439 ABC transporter-like APT56_15090 IPR003593 AAA+ ATPase domain APT56_15090 IPR017871 ABC transporter, conserved site APT56_15090 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_15095 IPR036514 SGNH hydrolase superfamily APT56_15095 IPR013830 SGNH hydrolase-type esterase domain APT56_15100 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site APT56_15100 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type APT56_15100 IPR027304 Trigger factor/SurA domain superfamily APT56_15105 IPR036264 Bacterial exopeptidase dimerisation domain APT56_15105 IPR017150 Peptidase M20, glutamate carboxypeptidase APT56_15105 IPR002933 Peptidase M20 APT56_15105 IPR011650 Peptidase M20, dimerisation domain APT56_15105 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site APT56_15110 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily APT56_15110 IPR030395 Glycerophosphodiester phosphodiesterase domain APT56_15115 IPR007473 Ribosomal RNA large subunit methyltransferase J APT56_15115 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT56_15120 IPR036188 FAD/NAD(P)-binding domain superfamily APT56_15120 IPR023753 FAD/NAD(P)-binding domain APT56_15120 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily APT56_15120 IPR021179 Mercury(II) reductase APT56_15120 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I APT56_15120 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain APT56_15120 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site APT56_15125 IPR036249 Thioredoxin-like superfamily APT56_15125 IPR013740 Redoxin APT56_15125 IPR011767 Glutaredoxin active site APT56_15125 IPR037944 Peroxiredoxin-5-like APT56_15125 IPR014025 Glutaredoxin subgroup APT56_15125 IPR011906 Glutaredoxin domain APT56_15125 IPR002109 Glutaredoxin APT56_15135 IPR023299 P-type ATPase, cytoplasmic domain N APT56_15135 IPR001757 P-type ATPase APT56_15135 IPR027256 P-type ATPase, subfamily IB APT56_15135 IPR036163 Heavy metal-associated domain superfamily APT56_15135 IPR006121 Heavy metal-associated domain, HMA APT56_15135 IPR023214 HAD superfamily APT56_15135 IPR036412 HAD-like superfamily APT56_15135 IPR008250 P-type ATPase, A domain superfamily APT56_15135 IPR023298 P-type ATPase, transmembrane domain superfamily APT56_15135 IPR018303 P-type ATPase, phosphorylation site APT56_15135 IPR006122 Heavy metal-associated domain, copper ion-binding APT56_15135 IPR017969 Heavy-metal-associated, conserved site APT56_15140 IPR009061 Putative DNA-binding domain superfamily APT56_15140 IPR011789 Cu(I)-responsive transcriptional regulator APT56_15140 IPR015358 Transcription regulator MerR, DNA binding APT56_15140 IPR000551 MerR-type HTH domain APT56_15145 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT56_15145 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD APT56_15145 IPR030390 RNA methyltransferase TrmA, active site APT56_15145 IPR030391 RNA methyltransferase TrmA, conserved site APT56_15145 IPR010280 (Uracil-5)-methyltransferase family APT56_15145 IPR002792 TRAM domain APT56_15145 IPR012340 Nucleic acid-binding, OB-fold APT56_15165 IPR016047 Peptidase M23 APT56_15165 IPR018392 LysM domain APT56_15165 IPR011055 Duplicated hybrid motif APT56_15165 IPR036779 LysM domain superfamily APT56_15170 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase APT56_15170 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT56_15175 IPR030048 Survival protein SurE APT56_15175 IPR002828 Survival protein SurE-like phosphatase/nucleotidase APT56_15175 IPR036523 SurE-like phosphatase/nucleotidase superfamily APT56_15180 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY APT56_15185 IPR017861 Kae1/TsaD family APT56_15185 IPR000905 Gcp-like domain APT56_15185 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD APT56_15190 IPR026033 Azaguanine-like transporters APT56_15190 IPR006043 Xanthine/uracil/vitamin C permease APT56_15200 IPR036661 Luciferase-like domain superfamily APT56_15200 IPR019949 Luciferase family oxidoreductase, group 1 APT56_15200 IPR011251 Luciferase-like domain APT56_15205 IPR005746 Thioredoxin APT56_15205 IPR036249 Thioredoxin-like superfamily APT56_15205 IPR017937 Thioredoxin, conserved site APT56_15205 IPR013766 Thioredoxin domain APT56_15210 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site APT56_15210 IPR020568 Ribosomal protein S5 domain 2-type fold APT56_15210 IPR036956 Impact, N-terminal domain superfamily APT56_15210 IPR035647 EF-G domain III/V-like APT56_15210 IPR023582 Impact family APT56_15210 IPR001498 Impact, N-terminal APT56_15230 IPR017871 ABC transporter, conserved site APT56_15230 IPR003593 AAA+ ATPase domain APT56_15230 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB APT56_15230 IPR003439 ABC transporter-like APT56_15230 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_15235 IPR020846 Major facilitator superfamily domain APT56_15235 IPR011701 Major facilitator superfamily APT56_15235 IPR036259 MFS transporter superfamily APT56_15235 IPR023008 Uncharacterized MFS-type transporter YhhS-like APT56_15240 IPR032781 ABC-transporter extension domain APT56_15240 IPR003439 ABC transporter-like APT56_15240 IPR003593 AAA+ ATPase domain APT56_15240 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_15245 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily APT56_15245 IPR003507 Peptidase family S66 APT56_15245 IPR040921 LD-carboxypeptidase, C-terminal APT56_15245 IPR040449 LD-carboxypeptidase, N-terminal APT56_15245 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal APT56_15245 IPR029062 Class I glutamine amidotransferase-like APT56_15250 IPR016193 Cytidine deaminase-like APT56_15250 IPR028883 tRNA-specific adenosine deaminase APT56_15250 IPR016192 APOBEC/CMP deaminase, zinc-binding APT56_15250 IPR002125 Cytidine and deoxycytidylate deaminase domain APT56_15255 IPR036412 HAD-like superfamily APT56_15255 IPR023214 HAD superfamily APT56_15265 IPR005133 Na+/H+ antiporter subunit G APT56_15270 IPR007208 Na(+)/H(+) antiporter subunit F-like APT56_15275 IPR004847 Na(+)/H(+) antiporter subunit E1 APT56_15275 IPR002758 Na+/H+ antiporter subunit E APT56_15280 IPR004775 Na(+)/H(+) antiporter subunit D1 APT56_15280 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit APT56_15285 IPR006673 Mnh complex subunit C1 APT56_15285 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like APT56_15290 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit APT56_15290 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal APT56_15290 IPR025383 Domain of unknown function DUF4040 APT56_15290 IPR005281 Monovalent cation:proton antiporter, subunit B APT56_15290 IPR007182 Na+/H+ antiporter MnhB subunit-related protein APT56_15290 IPR005663 Monovalent cation proton antiporter subunit A APT56_15295 IPR042100 Bordetella uptake gene, domain 1 APT56_15295 IPR005064 Bordetella uptake gene APT56_15315 IPR029052 Metallo-dependent phosphatase-like APT56_15315 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain APT56_15315 IPR026843 Nuclease SbcCD subunit D, C-terminal domain APT56_15315 IPR004593 Nuclease SbcCD subunit D APT56_15315 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type APT56_15320 IPR023080 D-amino acid dehydrogenase DadA APT56_15320 IPR036188 FAD/NAD(P)-binding domain superfamily APT56_15320 IPR006076 FAD dependent oxidoreductase APT56_15325 IPR000485 AsnC-type HTH domain APT56_15325 IPR011991 ArsR-like helix-turn-helix domain APT56_15325 IPR019885 Transcription regulator HTH, AsnC-type, conserved site APT56_15325 IPR019888 Transcription regulator AsnC-type APT56_15325 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain APT56_15325 IPR036390 Winged helix DNA-binding domain superfamily APT56_15325 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_15325 IPR011008 Dimeric alpha-beta barrel APT56_15355 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal APT56_15355 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain APT56_15355 IPR006089 Acyl-CoA dehydrogenase, conserved site APT56_15355 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily APT56_15355 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal APT56_15355 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal APT56_15355 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily APT56_15360 IPR030489 Transcription regulator Rrf2-type, conserved site APT56_15360 IPR000944 Transcription regulator Rrf2-type APT56_15360 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_15360 IPR036390 Winged helix DNA-binding domain superfamily APT56_15365 IPR023753 FAD/NAD(P)-binding domain APT56_15365 IPR036188 FAD/NAD(P)-binding domain superfamily APT56_15365 IPR012081 Alkyl hydroperoxide reductase subunit F APT56_15365 IPR002109 Glutaredoxin APT56_15365 IPR036249 Thioredoxin-like superfamily APT56_15365 IPR012336 Thioredoxin-like fold APT56_15365 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site APT56_15390 IPR001702 Porin, Gram-negative type APT56_15390 IPR033900 Porin domain, Gram-negative type APT56_15390 IPR023614 Porin domain superfamily APT56_15390 IPR002299 Porin, Neisseria sp. type APT56_15400 IPR011004 Trimeric LpxA-like superfamily APT56_15400 IPR018357 Hexapeptide transferase, conserved site APT56_15400 IPR001451 Hexapeptide repeat APT56_15405 IPR011006 CheY-like superfamily APT56_15405 IPR001867 OmpR/PhoB-type DNA-binding domain APT56_15405 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_15405 IPR039420 Transcriptional regulatory protein WalR-like APT56_15405 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response APT56_15405 IPR001789 Signal transduction response regulator, receiver domain APT56_15425 IPR035906 MetI-like superfamily APT56_15425 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_15430 IPR035906 MetI-like superfamily APT56_15430 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_15435 IPR013611 Transport-associated OB, type 2 APT56_15435 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_15435 IPR017871 ABC transporter, conserved site APT56_15435 IPR003439 ABC transporter-like APT56_15435 IPR003593 AAA+ ATPase domain APT56_15435 IPR017922 sn-Glycerol-3-phosphate import ATP-binding protein UgpC APT56_15435 IPR008995 Molybdate/tungstate binding, C-terminal APT56_15440 IPR040582 MalK, OB fold domain APT56_15440 IPR003439 ABC transporter-like APT56_15440 IPR003593 AAA+ ATPase domain APT56_15440 IPR017871 ABC transporter, conserved site APT56_15440 IPR008995 Molybdate/tungstate binding, C-terminal APT56_15440 IPR017922 sn-Glycerol-3-phosphate import ATP-binding protein UgpC APT56_15440 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_15445 IPR001034 DeoR-type HTH domain APT56_15445 IPR037171 NagB/RpiA transferase-like APT56_15445 IPR018356 Transcription regulator, HTH DeoR-type, conserved site APT56_15445 IPR036390 Winged helix DNA-binding domain superfamily APT56_15445 IPR014036 DeoR C-terminal sensor domain APT56_15445 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_15450 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily APT56_15450 IPR006076 FAD dependent oxidoreductase APT56_15450 IPR036188 FAD/NAD(P)-binding domain superfamily APT56_15450 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase APT56_15450 IPR031656 Alpha-glycerophosphate oxidase, C-terminal APT56_15455 IPR006674 HD domain APT56_15455 IPR037522 HD-GYP domain APT56_15455 IPR001789 Signal transduction response regulator, receiver domain APT56_15455 IPR011006 CheY-like superfamily APT56_15455 IPR003607 HD/PDEase domain APT56_15465 IPR036291 NAD(P)-binding domain superfamily APT56_15465 IPR020843 Polyketide synthase, enoylreductase domain APT56_15465 IPR041694 Oxidoreductase, N-terminal domain APT56_15465 IPR013149 Alcohol dehydrogenase, C-terminal APT56_15465 IPR011032 GroES-like superfamily APT56_15480 IPR003439 ABC transporter-like APT56_15480 IPR003593 AAA+ ATPase domain APT56_15480 IPR017871 ABC transporter, conserved site APT56_15480 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_15485 IPR000412 ABC-2 transporter APT56_15490 IPR010131 RND efflux system, outer membrane lipoprotein, NodT APT56_15490 IPR003423 Outer membrane efflux protein APT56_15500 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily APT56_15500 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain APT56_15530 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal APT56_15530 IPR013785 Aldolase-type TIM barrel APT56_15540 IPR000352 Peptide chain release factor class I APT56_15545 IPR030977 7-carboxy-7-deazaguanine synthase, Cx14CxxC-type APT56_15545 IPR013785 Aldolase-type TIM barrel APT56_15545 IPR024924 7-carboxy-7-deazaguanine synthase-like APT56_15545 IPR007197 Radical SAM APT56_15550 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily APT56_15550 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family APT56_15560 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein APT56_15565 IPR012451 Protein of unknown function DUF1656 APT56_15570 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APT56_15570 IPR006143 RND efflux pump, membrane fusion protein APT56_15575 IPR010131 RND efflux system, outer membrane lipoprotein, NodT APT56_15575 IPR003423 Outer membrane efflux protein APT56_15585 IPR039368 Acetolactate synthase large subunit, TPP binding domain APT56_15585 IPR029035 DHS-like NAD/FAD-binding domain superfamily APT56_15585 IPR029061 Thiamin diphosphate-binding fold APT56_15585 IPR012000 Thiamine pyrophosphate enzyme, central domain APT56_15585 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain APT56_15585 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding APT56_15585 IPR012846 Acetolactate synthase, large subunit, biosynthetic APT56_15590 IPR005064 Bordetella uptake gene APT56_15590 IPR042100 Bordetella uptake gene, domain 1 APT56_15595 IPR002347 Short-chain dehydrogenase/reductase SDR APT56_15595 IPR036291 NAD(P)-binding domain superfamily APT56_15605 IPR003140 Phospholipase/carboxylesterase/thioesterase APT56_15605 IPR029058 Alpha/Beta hydrolase fold APT56_15610 IPR004841 Amino acid permease/ SLC12A domain APT56_15610 IPR004840 Amino acid permease, conserved site APT56_15615 IPR033479 Double Cache domain 1 APT56_15615 IPR003660 HAMP domain APT56_15615 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain APT56_15615 IPR029151 Periplasmic sensor-like domain superfamily APT56_15615 IPR000727 Target SNARE coiled-coil homology domain APT56_15630 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain APT56_15630 IPR003141 Polymerase/histidinol phosphatase, N-terminal APT56_15630 IPR023073 DNA polymerase, error-prone APT56_15630 IPR004013 PHP domain APT56_15630 IPR016195 Polymerase/histidinol phosphatase-like APT56_15630 IPR004805 DNA polymerase III, alpha subunit APT56_15630 IPR040982 DNA polymerase III alpha subunit finger domain APT56_15630 IPR029460 DNA polymerase, helix-hairpin-helix motif APT56_15640 IPR009061 Putative DNA-binding domain superfamily APT56_15640 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain APT56_15640 IPR012925 TipAS antibiotic-recognition domain APT56_15640 IPR000551 MerR-type HTH domain APT56_15645 IPR005119 LysR, substrate-binding APT56_15645 IPR000847 Transcription regulator HTH, LysR APT56_15645 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_15645 IPR036390 Winged helix DNA-binding domain superfamily APT56_15650 IPR023210 NADP-dependent oxidoreductase domain APT56_15650 IPR036812 NADP-dependent oxidoreductase domain superfamily APT56_15660 IPR005946 Ribose-phosphate pyrophosphokinase APT56_15660 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site APT56_15660 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain APT56_15660 IPR000836 Phosphoribosyltransferase domain APT56_15660 IPR029057 Phosphoribosyltransferase-like APT56_15660 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type APT56_15665 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase APT56_15665 IPR016471 Nicotinamide phosphoribosyl transferase APT56_15665 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal APT56_15665 IPR013785 Aldolase-type TIM barrel APT56_15680 IPR003439 ABC transporter-like APT56_15680 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type APT56_15680 IPR003593 AAA+ ATPase domain APT56_15680 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_15680 IPR017871 ABC transporter, conserved site APT56_15685 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_15685 IPR035906 MetI-like superfamily APT56_15685 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain APT56_15690 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain APT56_15690 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_15690 IPR035906 MetI-like superfamily APT56_15695 IPR018313 Solute-binding protein family 3, conserved site APT56_15695 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APT56_15705 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily APT56_15705 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein APT56_15715 IPR006144 Secretion protein HlyD, conserved site APT56_15715 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APT56_15725 IPR002514 Transposase IS3/IS911family APT56_15725 IPR009057 Homeobox-like domain superfamily APT56_15730 IPR009057 Homeobox-like domain superfamily APT56_15730 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily APT56_15730 IPR025996 Tetracyclin repressor-like, C-terminal domain (WHG) APT56_15730 IPR001647 DNA-binding HTH domain, TetR-type APT56_15735 IPR016039 Thiolase-like APT56_15735 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain APT56_15735 IPR014030 Beta-ketoacyl synthase, N-terminal APT56_15735 IPR014031 Beta-ketoacyl synthase, C-terminal APT56_15735 IPR018201 Beta-ketoacyl synthase, active site APT56_15735 IPR000794 Beta-ketoacyl synthase APT56_15735 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 APT56_15740 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase APT56_15740 IPR016174 Di-haem cytochrome, transmembrane APT56_15770 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding APT56_15770 IPR003660 HAMP domain APT56_15770 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily APT56_15770 IPR004090 Chemotaxis methyl-accepting receptor APT56_15770 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain APT56_15770 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site APT56_15795 IPR004674 Alkylhydroperoxidase AhpD APT56_15795 IPR029032 AhpD-like APT56_15795 IPR003779 Carboxymuconolactone decarboxylase-like APT56_15795 IPR004675 Alkylhydroperoxidase AhpD core APT56_15805 IPR009197 Microcystin LR degradation protein MlrC APT56_15805 IPR010799 Microcystin LR degradation protein MlrC, C-terminal APT56_15805 IPR015995 Microcystin LR degradation protein MlrC, N-terminal APT56_15815 IPR039570 AmiC, periplasmic binding domain APT56_15815 IPR000709 Leu/Ile/Val-binding protein APT56_15815 IPR028082 Periplasmic binding protein-like I APT56_15820 IPR003593 AAA+ ATPase domain APT56_15820 IPR003439 ABC transporter-like APT56_15820 IPR017871 ABC transporter, conserved site APT56_15820 IPR030921 LPS export ABC transporter, ATP-binding protein LptB APT56_15820 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_15825 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_15825 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal APT56_15825 IPR017871 ABC transporter, conserved site APT56_15825 IPR003593 AAA+ ATPase domain APT56_15825 IPR003439 ABC transporter-like APT56_15830 IPR001851 ABC transporter, permease APT56_15835 IPR028082 Periplasmic binding protein-like I APT56_15835 IPR028081 Leucine-binding protein domain APT56_15840 IPR036526 Carbon-nitrogen hydrolase superfamily APT56_15840 IPR003010 Carbon-nitrogen hydrolase APT56_15845 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APT56_15845 IPR028973 PhnB-like APT56_15850 IPR011701 Major facilitator superfamily APT56_15850 IPR020846 Major facilitator superfamily domain APT56_15850 IPR036259 MFS transporter superfamily APT56_15855 IPR010640 Low temperature requirement A APT56_15860 IPR036390 Winged helix DNA-binding domain superfamily APT56_15860 IPR029016 GAF-like domain superfamily APT56_15860 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_15860 IPR005471 Transcription regulator IclR, N-terminal APT56_15860 IPR014757 Transcription regulator IclR, C-terminal APT56_15865 IPR012132 Glucose-methanol-choline oxidoreductase APT56_15865 IPR027424 Glucose Oxidase, domain 2 APT56_15865 IPR036188 FAD/NAD(P)-binding domain superfamily APT56_15865 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal APT56_15865 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal APT56_15870 IPR020846 Major facilitator superfamily domain APT56_15870 IPR005829 Sugar transporter, conserved site APT56_15870 IPR004736 MFS transporter, metabolite:H symporter APT56_15870 IPR036259 MFS transporter superfamily APT56_15870 IPR011701 Major facilitator superfamily APT56_15870 IPR005828 Major facilitator, sugar transporter-like APT56_15875 IPR020471 Aldo/keto reductase APT56_15875 IPR023210 NADP-dependent oxidoreductase domain APT56_15875 IPR036812 NADP-dependent oxidoreductase domain superfamily APT56_15885 IPR005064 Bordetella uptake gene APT56_15885 IPR042100 Bordetella uptake gene, domain 1 APT56_15890 IPR009057 Homeobox-like domain superfamily APT56_15890 IPR001647 DNA-binding HTH domain, TetR-type APT56_15890 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily APT56_15910 IPR007553 Domain of unknown function DUF523 APT56_15935 IPR002898 MotA/TolQ/ExbB proton channel APT56_15935 IPR000540 Flagellar motor protein MotA, conserved site APT56_15940 IPR008722 Outer membrane porin F, N-terminal APT56_15940 IPR036737 OmpA-like domain superfamily APT56_15940 IPR006690 Outer membrane protein, OmpA-like, conserved site APT56_15940 IPR006665 OmpA-like domain APT56_15940 IPR006664 Outer membrane protein, bacterial APT56_15940 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel APT56_15945 IPR011008 Dimeric alpha-beta barrel APT56_15945 IPR005545 YCII-related APT56_15950 IPR005545 YCII-related APT56_15950 IPR011008 Dimeric alpha-beta barrel APT56_15960 IPR011990 Tetratricopeptide-like helical domain superfamily APT56_15960 IPR013324 RNA polymerase sigma factor, region 3/4-like APT56_15960 IPR013325 RNA polymerase sigma factor, region 2 APT56_15960 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_15960 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 APT56_15960 IPR014284 RNA polymerase sigma-70 like domain APT56_15960 IPR007627 RNA polymerase sigma-70 region 2 APT56_15970 IPR000620 EamA domain APT56_15980 IPR023214 HAD superfamily APT56_15980 IPR036412 HAD-like superfamily APT56_15980 IPR023198 Phosphoglycolate phosphatase-like, domain 2 APT56_15980 IPR041492 Haloacid dehalogenase-like hydrolase APT56_15980 IPR006439 HAD hydrolase, subfamily IA APT56_15990 IPR036390 Winged helix DNA-binding domain superfamily APT56_15990 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_15990 IPR000847 Transcription regulator HTH, LysR APT56_15990 IPR005119 LysR, substrate-binding APT56_16000 IPR000182 GNAT domain APT56_16000 IPR016181 Acyl-CoA N-acyltransferase APT56_16010 IPR036249 Thioredoxin-like superfamily APT56_16010 IPR010987 Glutathione S-transferase, C-terminal-like APT56_16010 IPR036282 Glutathione S-transferase, C-terminal domain superfamily APT56_16010 IPR004045 Glutathione S-transferase, N-terminal APT56_16010 IPR004046 Glutathione S-transferase, C-terminal APT56_16020 IPR036390 Winged helix DNA-binding domain superfamily APT56_16020 IPR000835 MarR-type HTH domain APT56_16020 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_16020 IPR023187 Transcriptional regulator MarR-type, conserved site APT56_16025 IPR018775 RNA repair pathway DNA polymerase beta APT56_16040 IPR019810 Citrate synthase active site APT56_16040 IPR016142 Citrate synthase-like, large alpha subdomain APT56_16040 IPR016143 Citrate synthase-like, small alpha subdomain APT56_16040 IPR002020 Citrate synthase APT56_16040 IPR036969 Citrate synthase superfamily APT56_16045 IPR023606 CoA-transferase family III domain superfamily APT56_16045 IPR003673 CoA-transferase family III APT56_16075 IPR039567 Glycine zipper domain APT56_16075 IPR036737 OmpA-like domain superfamily APT56_16075 IPR006690 Outer membrane protein, OmpA-like, conserved site APT56_16075 IPR006665 OmpA-like domain APT56_16075 IPR006664 Outer membrane protein, bacterial APT56_16085 IPR004294 Carotenoid oxygenase APT56_16105 IPR006531 Gp5 N-terminal APT56_16105 IPR037026 Vgr protein, OB-fold domain superfamily APT56_16105 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein APT56_16105 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset APT56_16110 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_16110 IPR041546 ClpA/ClpB, AAA lid domain APT56_16110 IPR018368 ClpA/B, conserved site 1 APT56_16110 IPR001270 ClpA/B family APT56_16110 IPR004176 Clp, N-terminal APT56_16110 IPR036628 Clp, N-terminal domain superfamily APT56_16110 IPR019489 Clp ATPase, C-terminal APT56_16110 IPR017729 Type VI secretion system, ATPase ClpV1 APT56_16110 IPR003959 ATPase, AAA-type, core APT56_16110 IPR003593 AAA+ ATPase domain APT56_16230 IPR036737 OmpA-like domain superfamily APT56_16230 IPR006664 Outer membrane protein, bacterial APT56_16230 IPR007055 BON domain APT56_16230 IPR006690 Outer membrane protein, OmpA-like, conserved site APT56_16230 IPR006665 OmpA-like domain APT56_16255 IPR036005 Creatinase/aminopeptidase-like APT56_16255 IPR000994 Peptidase M24 APT56_16255 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 APT56_16255 IPR001714 Peptidase M24, methionine aminopeptidase APT56_16265 IPR036249 Thioredoxin-like superfamily APT56_16265 IPR004046 Glutathione S-transferase, C-terminal APT56_16265 IPR004045 Glutathione S-transferase, N-terminal APT56_16265 IPR036282 Glutathione S-transferase, C-terminal domain superfamily APT56_16265 IPR010987 Glutathione S-transferase, C-terminal-like APT56_16270 IPR001424 Superoxide dismutase, copper/zinc binding domain APT56_16270 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily APT56_16270 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone APT56_16270 IPR018152 Superoxide dismutase, copper/zinc, binding site APT56_16275 IPR007383 Protein of unknown function DUF445 APT56_16285 IPR029017 Enolase-like, N-terminal APT56_16285 IPR020810 Enolase, C-terminal TIM barrel domain APT56_16285 IPR020809 Enolase, conserved site APT56_16285 IPR020811 Enolase, N-terminal APT56_16285 IPR036849 Enolase-like, C-terminal domain superfamily APT56_16285 IPR000941 Enolase APT56_16310 IPR036390 Winged helix DNA-binding domain superfamily APT56_16310 IPR000847 Transcription regulator HTH, LysR APT56_16310 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_16310 IPR005119 LysR, substrate-binding APT56_16315 IPR012802 Fatty oxidation complex, alpha subunit FadJ APT56_16315 IPR036291 NAD(P)-binding domain superfamily APT56_16315 IPR001753 Enoyl-CoA hydratase/isomerase APT56_16315 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily APT56_16315 IPR029045 ClpP/crotonase-like domain superfamily APT56_16315 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding APT56_16315 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal APT56_16320 IPR020613 Thiolase, conserved site APT56_16320 IPR020617 Thiolase, C-terminal APT56_16320 IPR020610 Thiolase, active site APT56_16320 IPR020615 Thiolase, acyl-enzyme intermediate active site APT56_16320 IPR016039 Thiolase-like APT56_16320 IPR002155 Thiolase APT56_16320 IPR020616 Thiolase, N-terminal APT56_16325 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily APT56_16325 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily APT56_16325 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain APT56_16325 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal APT56_16325 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal APT56_16325 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal APT56_16335 IPR000873 AMP-dependent synthetase/ligase APT56_16335 IPR020845 AMP-binding, conserved site APT56_16335 IPR042099 AMP-dependent synthetase-like superfamily APT56_16335 IPR025110 AMP-binding enzyme, C-terminal domain APT56_16340 IPR005064 Bordetella uptake gene APT56_16340 IPR042100 Bordetella uptake gene, domain 1 APT56_16340 IPR006311 Twin-arginine translocation pathway, signal sequence APT56_16345 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme APT56_16345 IPR001926 Pyridoxal-phosphate dependent enzyme APT56_16345 IPR005966 D-cysteine desulfhydrase APT56_16345 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase APT56_16360 IPR000847 Transcription regulator HTH, LysR APT56_16360 IPR005119 LysR, substrate-binding APT56_16360 IPR036390 Winged helix DNA-binding domain superfamily APT56_16360 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_16365 IPR036259 MFS transporter superfamily APT56_16365 IPR020846 Major facilitator superfamily domain APT56_16365 IPR011701 Major facilitator superfamily APT56_16370 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_16370 IPR036390 Winged helix DNA-binding domain superfamily APT56_16370 IPR000835 MarR-type HTH domain APT56_16375 IPR020846 Major facilitator superfamily domain APT56_16375 IPR036259 MFS transporter superfamily APT56_16375 IPR011701 Major facilitator superfamily APT56_16375 IPR005829 Sugar transporter, conserved site APT56_16380 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily APT56_16380 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding APT56_16380 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily APT56_16380 IPR009056 Cytochrome c-like domain APT56_16380 IPR036909 Cytochrome c-like domain superfamily APT56_16380 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead APT56_16385 IPR036884 [2Fe-2S]-binding domain superfamily APT56_16385 IPR012675 Beta-grasp domain superfamily APT56_16385 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site APT56_16385 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain APT56_16385 IPR002888 [2Fe-2S]-binding APT56_16385 IPR036010 2Fe-2S ferredoxin-like superfamily APT56_16390 IPR002938 FAD-binding domain APT56_16390 IPR036188 FAD/NAD(P)-binding domain superfamily APT56_16395 IPR029058 Alpha/Beta hydrolase fold APT56_16395 IPR000073 Alpha/beta hydrolase fold-1 APT56_16405 IPR036380 Isochorismatase-like superfamily APT56_16405 IPR000868 Isochorismatase-like APT56_16410 IPR036909 Cytochrome c-like domain superfamily APT56_16410 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding APT56_16410 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily APT56_16410 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead APT56_16410 IPR009056 Cytochrome c-like domain APT56_16410 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily APT56_16425 IPR015424 Pyridoxal phosphate-dependent transferase APT56_16425 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APT56_16425 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APT56_16425 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme APT56_16425 IPR006237 L-methionine gamma-lyase APT56_16430 IPR011008 Dimeric alpha-beta barrel APT56_16430 IPR019885 Transcription regulator HTH, AsnC-type, conserved site APT56_16430 IPR036390 Winged helix DNA-binding domain superfamily APT56_16430 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_16430 IPR019888 Transcription regulator AsnC-type APT56_16430 IPR000485 AsnC-type HTH domain APT56_16430 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain APT56_16430 IPR011991 ArsR-like helix-turn-helix domain APT56_16435 IPR002299 Porin, Neisseria sp. type APT56_16435 IPR033900 Porin domain, Gram-negative type APT56_16435 IPR001702 Porin, Gram-negative type APT56_16435 IPR023614 Porin domain superfamily APT56_16440 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA APT56_16440 IPR003593 AAA+ ATPase domain APT56_16440 IPR008995 Molybdate/tungstate binding, C-terminal APT56_16440 IPR003439 ABC transporter-like APT56_16440 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit APT56_16440 IPR013611 Transport-associated OB, type 2 APT56_16440 IPR017871 ABC transporter, conserved site APT56_16440 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_16445 IPR026045 Ferric binding protein APT56_16450 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_16450 IPR035906 MetI-like superfamily APT56_16450 IPR011867 Molybdate ABC transporter, permease protein APT56_16455 IPR000160 GGDEF domain APT56_16455 IPR001294 Phytochrome APT56_16455 IPR035919 EAL domain superfamily APT56_16455 IPR016132 Phytochrome chromophore attachment domain APT56_16455 IPR003018 GAF domain APT56_16455 IPR029016 GAF-like domain superfamily APT56_16455 IPR029787 Nucleotide cyclase APT56_16455 IPR001633 EAL domain APT56_16455 IPR013515 Phytochrome, central region APT56_16460 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase APT56_16460 IPR011006 CheY-like superfamily APT56_16460 IPR035909 Methylesterase CheB, C-terminal APT56_16460 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type APT56_16460 IPR001789 Signal transduction response regulator, receiver domain APT56_16465 IPR036641 HPT domain superfamily APT56_16465 IPR011006 CheY-like superfamily APT56_16465 IPR005467 Histidine kinase domain APT56_16465 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APT56_16465 IPR003594 Histidine kinase/HSP90-like ATPase APT56_16465 IPR002545 CheW-like domain APT56_16465 IPR004358 Signal transduction histidine kinase-related protein, C-terminal APT56_16465 IPR036061 CheW-like domain superfamily APT56_16465 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain APT56_16465 IPR001789 Signal transduction response regulator, receiver domain APT56_16475 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal APT56_16475 IPR000780 MCP methyltransferase, CheR-type APT56_16475 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT56_16475 IPR013026 Tetratricopeptide repeat-containing domain APT56_16475 IPR011990 Tetratricopeptide-like helical domain superfamily APT56_16475 IPR019734 Tetratricopeptide repeat APT56_16485 IPR033479 Double Cache domain 1 APT56_16485 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain APT56_16485 IPR003660 HAMP domain APT56_16485 IPR029151 Periplasmic sensor-like domain superfamily APT56_16485 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding APT56_16490 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit APT56_16490 IPR036928 Amidase signature (AS) superfamily APT56_16490 IPR020556 Amidase, conserved site APT56_16490 IPR023631 Amidase signature domain APT56_16490 IPR000120 Amidase APT56_16500 IPR000847 Transcription regulator HTH, LysR APT56_16500 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_16500 IPR036390 Winged helix DNA-binding domain superfamily APT56_16500 IPR005119 LysR, substrate-binding APT56_16505 IPR005829 Sugar transporter, conserved site APT56_16505 IPR020846 Major facilitator superfamily domain APT56_16505 IPR011701 Major facilitator superfamily APT56_16505 IPR004638 Drug resistance transporter EmrB-like APT56_16505 IPR036259 MFS transporter superfamily APT56_16515 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type APT56_16515 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_16515 IPR001650 Helicase, C-terminal APT56_16515 IPR039000 ATP-dependent DNA helicase DinG APT56_16515 IPR010614 DEAD2 APT56_16515 IPR006555 ATP-dependent helicase, C-terminal APT56_16520 IPR011856 tRNA endonuclease-like domain superfamily APT56_16520 IPR014883 VRR-NUC domain APT56_16520 IPR040603 Fanconi-associated nuclease 1, SAP domain APT56_16520 IPR033315 Fanconi-associated nuclease 1-like APT56_16530 IPR016181 Acyl-CoA N-acyltransferase APT56_16530 IPR000182 GNAT domain APT56_16530 IPR017813 Mycothiol acetyltransferase APT56_16545 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit APT56_16545 IPR008168 Cytochrome c, class IC APT56_16545 IPR036909 Cytochrome c-like domain superfamily APT56_16545 IPR009056 Cytochrome c-like domain APT56_16550 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal APT56_16550 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal APT56_16550 IPR036188 FAD/NAD(P)-binding domain superfamily APT56_16555 IPR027056 Gluconate 2-dehydrogenase subunit 3 APT56_16555 IPR006311 Twin-arginine translocation pathway, signal sequence APT56_16565 IPR011701 Major facilitator superfamily APT56_16565 IPR020846 Major facilitator superfamily domain APT56_16565 IPR005829 Sugar transporter, conserved site APT56_16565 IPR036259 MFS transporter superfamily APT56_16565 IPR004638 Drug resistance transporter EmrB-like APT56_16570 IPR036390 Winged helix DNA-binding domain superfamily APT56_16570 IPR037402 HTH-type transcriptional regulator YidZ, PBP2 domain APT56_16570 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_16570 IPR023746 Transcription regulator HTH, YidZ APT56_16570 IPR000847 Transcription regulator HTH, LysR APT56_16570 IPR005119 LysR, substrate-binding APT56_16585 IPR011701 Major facilitator superfamily APT56_16585 IPR020846 Major facilitator superfamily domain APT56_16585 IPR023680 Purine ribonucleoside efflux pump, NepI APT56_16585 IPR036259 MFS transporter superfamily APT56_16590 IPR000847 Transcription regulator HTH, LysR APT56_16590 IPR036390 Winged helix DNA-binding domain superfamily APT56_16590 IPR005119 LysR, substrate-binding APT56_16590 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_16595 IPR015358 Transcription regulator MerR, DNA binding APT56_16595 IPR009061 Putative DNA-binding domain superfamily APT56_16595 IPR011789 Cu(I)-responsive transcriptional regulator APT56_16595 IPR000551 MerR-type HTH domain APT56_16630 IPR000639 Epoxide hydrolase-like APT56_16630 IPR000073 Alpha/beta hydrolase fold-1 APT56_16630 IPR029058 Alpha/Beta hydrolase fold APT56_16645 IPR036291 NAD(P)-binding domain superfamily APT56_16645 IPR011283 Acetoacetyl-CoA reductase APT56_16645 IPR020904 Short-chain dehydrogenase/reductase, conserved site APT56_16645 IPR002347 Short-chain dehydrogenase/reductase SDR APT56_16650 IPR009594 Transcription regulator HTH, AraC, N-terminal APT56_16650 IPR009057 Homeobox-like domain superfamily APT56_16650 IPR018060 DNA binding HTH domain, AraC-type APT56_16670 IPR036380 Isochorismatase-like superfamily APT56_16670 IPR000868 Isochorismatase-like APT56_16675 IPR000847 Transcription regulator HTH, LysR APT56_16675 IPR005119 LysR, substrate-binding APT56_16675 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_16675 IPR036390 Winged helix DNA-binding domain superfamily APT56_16680 IPR036390 Winged helix DNA-binding domain superfamily APT56_16680 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_16680 IPR011991 ArsR-like helix-turn-helix domain APT56_16680 IPR001845 HTH ArsR-type DNA-binding domain APT56_16685 IPR020843 Polyketide synthase, enoylreductase domain APT56_16685 IPR011032 GroES-like superfamily APT56_16685 IPR013149 Alcohol dehydrogenase, C-terminal APT56_16685 IPR013154 Alcohol dehydrogenase, N-terminal APT56_16685 IPR036291 NAD(P)-binding domain superfamily APT56_16715 IPR001674 GMP synthase, C-terminal APT56_16715 IPR029062 Class I glutamine amidotransferase-like APT56_16715 IPR025777 GMP synthetase ATP pyrophosphatase domain APT56_16715 IPR017926 Glutamine amidotransferase APT56_16715 IPR022310 NAD/GMP synthase APT56_16715 IPR022955 GMP synthase APT56_16715 IPR004739 GMP synthase, glutamine amidotransferase APT56_16715 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT56_16720 IPR001093 IMP dehydrogenase/GMP reductase APT56_16720 IPR015875 IMP dehydrogenase / GMP reductase, conserved site APT56_16720 IPR013785 Aldolase-type TIM barrel APT56_16720 IPR000644 CBS domain APT56_16720 IPR005990 Inosine-5'-monophosphate dehydrogenase APT56_16745 IPR037411 HTH-type transcriptional regulator AlsR, PBP2 domain APT56_16745 IPR000847 Transcription regulator HTH, LysR APT56_16745 IPR005119 LysR, substrate-binding APT56_16745 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_16745 IPR036390 Winged helix DNA-binding domain superfamily APT56_16750 IPR005064 Bordetella uptake gene APT56_16750 IPR042100 Bordetella uptake gene, domain 1 APT56_16755 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain APT56_16755 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain APT56_16755 IPR036291 NAD(P)-binding domain superfamily APT56_16780 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_16780 IPR036390 Winged helix DNA-binding domain superfamily APT56_16780 IPR005119 LysR, substrate-binding APT56_16780 IPR037404 HTH-type transcriptional activator IlvY, PBP2 domain APT56_16780 IPR000847 Transcription regulator HTH, LysR APT56_16785 IPR001926 Pyridoxal-phosphate dependent enzyme APT56_16785 IPR011780 D-serine ammonia-lyase APT56_16785 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme APT56_16790 IPR005064 Bordetella uptake gene APT56_16790 IPR042100 Bordetella uptake gene, domain 1 APT56_16795 IPR023631 Amidase signature domain APT56_16795 IPR000120 Amidase APT56_16795 IPR036928 Amidase signature (AS) superfamily APT56_16795 IPR020556 Amidase, conserved site APT56_16810 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain APT56_16810 IPR006158 Cobalamin (vitamin B12)-binding domain APT56_16810 IPR036594 Methionine synthase domain APT56_16810 IPR000551 MerR-type HTH domain APT56_16810 IPR009061 Putative DNA-binding domain superfamily APT56_16810 IPR036724 Cobalamin-binding domain superfamily APT56_16815 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_16815 IPR000847 Transcription regulator HTH, LysR APT56_16815 IPR005119 LysR, substrate-binding APT56_16815 IPR036390 Winged helix DNA-binding domain superfamily APT56_16815 IPR037415 Octopine catabolism/uptake operon regulatory protein OccR, PBP2 domain APT56_16820 IPR038732 FAD-dependent urate hydroxylase HpyO, FAD/NAD(P)-binding domain APT56_16820 IPR036188 FAD/NAD(P)-binding domain superfamily APT56_16825 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_16825 IPR035906 MetI-like superfamily APT56_16830 IPR025966 Oligopeptide transport permease C-like, N-terminal domain APT56_16830 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_16830 IPR035906 MetI-like superfamily APT56_16835 IPR003439 ABC transporter-like APT56_16835 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal APT56_16835 IPR017871 ABC transporter, conserved site APT56_16835 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_16835 IPR003593 AAA+ ATPase domain APT56_16840 IPR017871 ABC transporter, conserved site APT56_16840 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal APT56_16840 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_16840 IPR003439 ABC transporter-like APT56_16840 IPR003593 AAA+ ATPase domain APT56_16845 IPR039424 Solute-binding protein family 5 APT56_16845 IPR030678 Peptide/nickel binding protein, MppA-type APT56_16845 IPR023765 Solute-binding protein family 5, conserved site APT56_16845 IPR000914 Solute-binding protein family 5 domain APT56_16860 IPR005119 LysR, substrate-binding APT56_16860 IPR000847 Transcription regulator HTH, LysR APT56_16860 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_16860 IPR036390 Winged helix DNA-binding domain superfamily APT56_16865 IPR005064 Bordetella uptake gene APT56_16865 IPR042100 Bordetella uptake gene, domain 1 APT56_16870 IPR036111 Malate/L-sulfolactate/L-lactate dehydrogenase-like superfamily APT56_16870 IPR003767 Malate/L-lactate dehydrogenase-like APT56_16870 IPR017590 Ureidoglycolate dehydrogenase APT56_16875 IPR005064 Bordetella uptake gene APT56_16875 IPR042100 Bordetella uptake gene, domain 1 APT56_16920 IPR037066 TonB-dependent receptor, plug domain superfamily APT56_16920 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily APT56_16920 IPR012910 TonB-dependent receptor, plug domain APT56_16920 IPR010916 TonB box, conserved site APT56_16920 IPR000531 TonB-dependent receptor-like, beta-barrel APT56_16920 IPR010105 TonB-dependent siderophore receptor APT56_16920 IPR039423 TonB-dependent receptor-like APT56_16925 IPR011051 RmlC-like cupin domain superfamily APT56_16925 IPR009057 Homeobox-like domain superfamily APT56_16925 IPR032783 AraC-type transcription regulator, ligand-binding domain APT56_16925 IPR020449 Transcription regulator HTH, AraC- type APT56_16925 IPR018060 DNA binding HTH domain, AraC-type APT56_16925 IPR014710 RmlC-like jelly roll fold APT56_16960 IPR029032 AhpD-like APT56_16960 IPR003779 Carboxymuconolactone decarboxylase-like APT56_16960 IPR012788 4-carboxymuconolactone decarboxylase APT56_16965 IPR042100 Bordetella uptake gene, domain 1 APT56_16965 IPR005064 Bordetella uptake gene APT56_16975 IPR023606 CoA-transferase family III domain superfamily APT56_16975 IPR003673 CoA-transferase family III APT56_16980 IPR005000 HpcH/HpaI aldolase/citrate lyase domain APT56_16980 IPR011206 Citrate lyase beta subunit-like APT56_16980 IPR006475 Citrate lyase, beta subunit, bacteria APT56_16980 IPR040442 Pyruvate kinase-like domain superfamily APT56_16980 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily APT56_16985 IPR000847 Transcription regulator HTH, LysR APT56_16985 IPR036390 Winged helix DNA-binding domain superfamily APT56_16985 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_16985 IPR005119 LysR, substrate-binding APT56_16985 IPR037403 HTH-type transcriptional regulator CynR, PBP2 domain APT56_16995 IPR039423 TonB-dependent receptor-like APT56_16995 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily APT56_16995 IPR037066 TonB-dependent receptor, plug domain superfamily APT56_16995 IPR010105 TonB-dependent siderophore receptor APT56_16995 IPR010917 TonB-dependent receptor, conserved site APT56_16995 IPR000531 TonB-dependent receptor-like, beta-barrel APT56_16995 IPR012910 TonB-dependent receptor, plug domain APT56_16995 IPR011662 Secretin/TonB, short N-terminal domain APT56_17010 IPR037396 FMN hydroxy acid dehydrogenase domain APT56_17010 IPR000262 FMN-dependent dehydrogenase APT56_17010 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent APT56_17010 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site APT56_17010 IPR013785 Aldolase-type TIM barrel APT56_17015 IPR003673 CoA-transferase family III APT56_17015 IPR023606 CoA-transferase family III domain superfamily APT56_17020 IPR001753 Enoyl-CoA hydratase/isomerase APT56_17020 IPR029045 ClpP/crotonase-like domain superfamily APT56_17020 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site APT56_17025 IPR003673 CoA-transferase family III APT56_17025 IPR023606 CoA-transferase family III domain superfamily APT56_17030 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily APT56_17030 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily APT56_17030 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal APT56_17030 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal APT56_17030 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal APT56_17030 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain APT56_17035 IPR005064 Bordetella uptake gene APT56_17035 IPR042100 Bordetella uptake gene, domain 1 APT56_17040 IPR005119 LysR, substrate-binding APT56_17040 IPR000847 Transcription regulator HTH, LysR APT56_17040 IPR036390 Winged helix DNA-binding domain superfamily APT56_17040 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_17045 IPR032466 Metal-dependent hydrolase APT56_17045 IPR006680 Amidohydrolase-related APT56_17060 IPR002563 Flavin reductase like domain APT56_17060 IPR012349 FMN-binding split barrel APT56_17065 IPR042100 Bordetella uptake gene, domain 1 APT56_17065 IPR005064 Bordetella uptake gene APT56_17070 IPR005064 Bordetella uptake gene APT56_17070 IPR042100 Bordetella uptake gene, domain 1 APT56_17090 IPR000531 TonB-dependent receptor-like, beta-barrel APT56_17090 IPR010917 TonB-dependent receptor, conserved site APT56_17090 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily APT56_17090 IPR010916 TonB box, conserved site APT56_17090 IPR039423 TonB-dependent receptor-like APT56_17090 IPR037066 TonB-dependent receptor, plug domain superfamily APT56_17090 IPR012910 TonB-dependent receptor, plug domain APT56_17090 IPR010105 TonB-dependent siderophore receptor APT56_17100 IPR029787 Nucleotide cyclase APT56_17100 IPR003660 HAMP domain APT56_17100 IPR000160 GGDEF domain APT56_17100 IPR035919 EAL domain superfamily APT56_17100 IPR001633 EAL domain APT56_17105 IPR010916 TonB box, conserved site APT56_17105 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily APT56_17105 IPR000531 TonB-dependent receptor-like, beta-barrel APT56_17105 IPR039423 TonB-dependent receptor-like APT56_17105 IPR037066 TonB-dependent receptor, plug domain superfamily APT56_17105 IPR012910 TonB-dependent receptor, plug domain APT56_17105 IPR010105 TonB-dependent siderophore receptor APT56_17150 IPR001986 Enolpyruvate transferase domain APT56_17150 IPR036968 Enolpyruvate transferase domain superfamily APT56_17150 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase APT56_17150 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta APT56_17160 IPR038271 Purine-cytosine permease superfamily APT56_17160 IPR001248 Purine-cytosine permease APT56_17160 IPR012681 Nucleobase cation symporter-1, NCS1 APT56_17175 IPR009057 Homeobox-like domain superfamily APT56_17175 IPR001647 DNA-binding HTH domain, TetR-type APT56_17175 IPR023769 Nucleoid occlusion factor SlmA APT56_17185 IPR001789 Signal transduction response regulator, receiver domain APT56_17185 IPR036641 HPT domain superfamily APT56_17185 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily APT56_17185 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain APT56_17185 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APT56_17185 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain APT56_17185 IPR004358 Signal transduction histidine kinase-related protein, C-terminal APT56_17185 IPR005467 Histidine kinase domain APT56_17185 IPR011006 CheY-like superfamily APT56_17185 IPR003594 Histidine kinase/HSP90-like ATPase APT56_17185 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APT56_17190 IPR011006 CheY-like superfamily APT56_17190 IPR003607 HD/PDEase domain APT56_17190 IPR037522 HD-GYP domain APT56_17190 IPR001789 Signal transduction response regulator, receiver domain APT56_17215 IPR005064 Bordetella uptake gene APT56_17215 IPR042100 Bordetella uptake gene, domain 1 APT56_17225 IPR003691 Putative fluoride ion transporter CrcB APT56_17240 IPR000847 Transcription regulator HTH, LysR APT56_17240 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_17240 IPR036390 Winged helix DNA-binding domain superfamily APT56_17240 IPR005119 LysR, substrate-binding APT56_17250 IPR042100 Bordetella uptake gene, domain 1 APT56_17250 IPR005064 Bordetella uptake gene APT56_17260 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APT56_17260 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily APT56_17260 IPR013727 Two-component sensor kinase, N-terminal APT56_17260 IPR003660 HAMP domain APT56_17260 IPR003594 Histidine kinase/HSP90-like ATPase APT56_17260 IPR005467 Histidine kinase domain APT56_17260 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain APT56_17260 IPR004358 Signal transduction histidine kinase-related protein, C-terminal APT56_17265 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_17265 IPR011006 CheY-like superfamily APT56_17265 IPR001789 Signal transduction response regulator, receiver domain APT56_17265 IPR001867 OmpR/PhoB-type DNA-binding domain APT56_17265 IPR039420 Transcriptional regulatory protein WalR-like APT56_17280 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site APT56_17280 IPR004090 Chemotaxis methyl-accepting receptor APT56_17280 IPR003660 HAMP domain APT56_17280 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding APT56_17280 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily APT56_17280 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain APT56_17285 IPR029062 Class I glutamine amidotransferase-like APT56_17285 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily APT56_17285 IPR036676 PurM-like, C-terminal domain superfamily APT56_17285 IPR017926 Glutamine amidotransferase APT56_17285 IPR036921 PurM-like, N-terminal domain superfamily APT56_17285 IPR040707 Phosphoribosylformylglycinamidine synthase, N-terminal APT56_17285 IPR010073 Phosphoribosylformylglycinamidine synthase PurL APT56_17285 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain APT56_17285 IPR010918 PurM-like, C-terminal domain APT56_17295 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit APT56_17295 IPR004681 TRAP transporter large membrane protein DctM APT56_17300 IPR018389 TRAP transporter solute receptor DctP/TeaA APT56_17300 IPR038404 TRAP transporter solute receptor DctP superfamily APT56_17300 IPR004682 TRAP transporter solute receptor, DctP family APT56_17305 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily APT56_17305 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal APT56_17305 IPR023459 Transcription elongation factor GreA/GreB family APT56_17305 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal APT56_17305 IPR006358 Transcription elongation factor GreB APT56_17305 IPR028624 Transcription elongation factor GreA/GreB APT56_17305 IPR018151 Transcription elongation factor, GreA/GreB, conserved site APT56_17305 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily APT56_17310 IPR004013 PHP domain APT56_17310 IPR016195 Polymerase/histidinol phosphatase-like APT56_17310 IPR003141 Polymerase/histidinol phosphatase, N-terminal APT56_17315 IPR000073 Alpha/beta hydrolase fold-1 APT56_17315 IPR029058 Alpha/Beta hydrolase fold APT56_17315 IPR000639 Epoxide hydrolase-like APT56_17330 IPR003333 Mycolic acid cyclopropane synthase APT56_17330 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT56_17335 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal APT56_17335 IPR027424 Glucose Oxidase, domain 2 APT56_17335 IPR012132 Glucose-methanol-choline oxidoreductase APT56_17335 IPR036188 FAD/NAD(P)-binding domain superfamily APT56_17335 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal APT56_17340 IPR036390 Winged helix DNA-binding domain superfamily APT56_17340 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_17340 IPR000847 Transcription regulator HTH, LysR APT56_17340 IPR037403 HTH-type transcriptional regulator CynR, PBP2 domain APT56_17340 IPR005119 LysR, substrate-binding APT56_17350 IPR000847 Transcription regulator HTH, LysR APT56_17350 IPR036390 Winged helix DNA-binding domain superfamily APT56_17350 IPR005119 LysR, substrate-binding APT56_17350 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_17355 IPR020846 Major facilitator superfamily domain APT56_17355 IPR011701 Major facilitator superfamily APT56_17355 IPR005828 Major facilitator, sugar transporter-like APT56_17355 IPR036259 MFS transporter superfamily APT56_17355 IPR004736 MFS transporter, metabolite:H symporter APT56_17355 IPR005829 Sugar transporter, conserved site APT56_17360 IPR011650 Peptidase M20, dimerisation domain APT56_17360 IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase APT56_17360 IPR036264 Bacterial exopeptidase dimerisation domain APT56_17360 IPR002933 Peptidase M20 APT56_17365 IPR004477 ComEC/Rec2-related protein APT56_17365 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like APT56_17365 IPR001279 Metallo-beta-lactamase APT56_17365 IPR004797 Competence protein ComEC/Rec2 APT56_17365 IPR035681 ComA-like, MBL domain APT56_17370 IPR002028 Tryptophan synthase, alpha chain APT56_17370 IPR011060 Ribulose-phosphate binding barrel APT56_17370 IPR013785 Aldolase-type TIM barrel APT56_17375 IPR006653 Tryptophan synthase, beta chain, conserved site APT56_17375 IPR001926 Pyridoxal-phosphate dependent enzyme APT56_17375 IPR023026 Tryptophan synthase beta chain/beta chain-like APT56_17375 IPR006654 Tryptophan synthase, beta chain APT56_17375 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme APT56_17380 IPR005119 LysR, substrate-binding APT56_17380 IPR037418 HTH-type transcriptional regulator TrpI, PBP2 APT56_17380 IPR000847 Transcription regulator HTH, LysR APT56_17380 IPR036390 Winged helix DNA-binding domain superfamily APT56_17380 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_17385 IPR014981 Flagellin D3 APT56_17385 IPR001492 Flagellin APT56_17385 IPR001029 Flagellin, D0/D1 domain APT56_17390 IPR001492 Flagellin APT56_17390 IPR042187 Flagellin, C-terminal domain, subdomain 2 APT56_17390 IPR001029 Flagellin, D0/D1 domain APT56_17395 IPR001387 Cro/C1-type helix-turn-helix domain APT56_17395 IPR013430 Toxin-antitoxin system, antidote protein, HigA APT56_17395 IPR010982 Lambda repressor-like, DNA-binding domain superfamily APT56_17420 IPR029039 Flavoprotein-like superfamily APT56_17420 IPR003680 Flavodoxin-like fold APT56_17430 IPR037124 GroES chaperonin superfamily APT56_17430 IPR018369 Chaperonin GroES, conserved site APT56_17430 IPR011032 GroES-like superfamily APT56_17430 IPR020818 GroES chaperonin family APT56_17435 IPR018370 Chaperonin Cpn60, conserved site APT56_17435 IPR027410 TCP-1-like chaperonin intermediate domain superfamily APT56_17435 IPR001844 Chaperonin Cpn60 APT56_17435 IPR002423 Chaperonin Cpn60/TCP-1 family APT56_17435 IPR027409 GroEL-like apical domain superfamily APT56_17435 IPR027413 GroEL-like equatorial domain superfamily APT56_17445 IPR008978 HSP20-like chaperone APT56_17445 IPR002068 Alpha crystallin/Hsp20 domain APT56_17460 IPR036291 NAD(P)-binding domain superfamily APT56_17460 IPR020904 Short-chain dehydrogenase/reductase, conserved site APT56_17460 IPR002347 Short-chain dehydrogenase/reductase SDR APT56_17465 IPR002347 Short-chain dehydrogenase/reductase SDR APT56_17465 IPR020904 Short-chain dehydrogenase/reductase, conserved site APT56_17465 IPR036291 NAD(P)-binding domain superfamily APT56_17470 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_17470 IPR003439 ABC transporter-like APT56_17470 IPR017871 ABC transporter, conserved site APT56_17470 IPR003593 AAA+ ATPase domain APT56_17470 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ APT56_17490 IPR000417 Hydroxyethylthiazole kinase APT56_17490 IPR029056 Ribokinase-like APT56_17495 IPR010105 TonB-dependent siderophore receptor APT56_17495 IPR012910 TonB-dependent receptor, plug domain APT56_17495 IPR037066 TonB-dependent receptor, plug domain superfamily APT56_17495 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily APT56_17495 IPR000531 TonB-dependent receptor-like, beta-barrel APT56_17495 IPR039423 TonB-dependent receptor-like APT56_17500 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_17500 IPR003439 ABC transporter-like APT56_17500 IPR003593 AAA+ ATPase domain APT56_17500 IPR017871 ABC transporter, conserved site APT56_17505 IPR037294 ABC transporter, BtuC-like APT56_17505 IPR000522 ABC transporter, permease protein, BtuC-like APT56_17510 IPR000522 ABC transporter, permease protein, BtuC-like APT56_17510 IPR037294 ABC transporter, BtuC-like APT56_17515 IPR033870 FatB domain APT56_17515 IPR002491 ABC transporter periplasmic binding domain APT56_17520 IPR039426 Vitamin B12 transporter BtuB-like APT56_17520 IPR037066 TonB-dependent receptor, plug domain superfamily APT56_17520 IPR010917 TonB-dependent receptor, conserved site APT56_17520 IPR012910 TonB-dependent receptor, plug domain APT56_17520 IPR000531 TonB-dependent receptor-like, beta-barrel APT56_17520 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily APT56_17520 IPR010916 TonB box, conserved site APT56_17525 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_17525 IPR039420 Transcriptional regulatory protein WalR-like APT56_17525 IPR001789 Signal transduction response regulator, receiver domain APT56_17525 IPR001867 OmpR/PhoB-type DNA-binding domain APT56_17525 IPR011006 CheY-like superfamily APT56_17530 IPR031930 2-component histidine kinase, sensor domain APT56_17530 IPR003594 Histidine kinase/HSP90-like ATPase APT56_17530 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APT56_17530 IPR004358 Signal transduction histidine kinase-related protein, C-terminal APT56_17530 IPR038428 2-component histidine kinase, sensor domain superfamily APT56_17530 IPR005467 Histidine kinase domain APT56_17530 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain APT56_17530 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily APT56_17530 IPR003660 HAMP domain APT56_17535 IPR032466 Metal-dependent hydrolase APT56_17535 IPR001130 TatD family APT56_17535 IPR015991 Uncharacterised hydrolase TatD-type APT56_17535 IPR018228 Deoxyribonuclease, TatD-related, conserved site APT56_17540 IPR003593 AAA+ ATPase domain APT56_17540 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_17540 IPR011924 Lipoprotein releasing system, ATP-binding protein APT56_17540 IPR015854 ABC transporter, lipoprotein release, LolD APT56_17540 IPR017871 ABC transporter, conserved site APT56_17540 IPR003439 ABC transporter-like APT56_17545 IPR003838 ABC transporter permease protein domain APT56_17545 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E APT56_17545 IPR025857 MacB-like periplasmic core domain APT56_17555 IPR004610 Bacterial RecJ exonuclease APT56_17555 IPR003156 DHHA1 domain APT56_17555 IPR038763 DHH phosphoesterase superfamily APT56_17555 IPR001667 DDH domain APT56_17555 IPR041122 RecJ, OB domain APT56_17560 IPR036709 Autotransporter beta-domain superfamily APT56_17560 IPR012332 P22 tailspike-like, C-terminal domain superfamily APT56_17560 IPR011050 Pectin lyase fold/virulence factor APT56_17560 IPR030930 Adhesin of bacterial autotransporter system APT56_17560 IPR005546 Autotransporter beta-domain APT56_17560 IPR024973 ESPR domain APT56_17560 IPR006315 Outer membrane autotransporter barrel APT56_17565 IPR011701 Major facilitator superfamily APT56_17565 IPR020846 Major facilitator superfamily domain APT56_17565 IPR036259 MFS transporter superfamily APT56_17570 IPR000352 Peptide chain release factor class I APT56_17570 IPR005139 Peptide chain release factor APT56_17570 IPR004374 Peptide chain release factor 2 APT56_17575 IPR020904 Short-chain dehydrogenase/reductase, conserved site APT56_17575 IPR036291 NAD(P)-binding domain superfamily APT56_17575 IPR002347 Short-chain dehydrogenase/reductase SDR APT56_17580 IPR006195 Aminoacyl-tRNA synthetase, class II APT56_17580 IPR002313 Lysine-tRNA ligase, class II APT56_17580 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal APT56_17580 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) APT56_17580 IPR012340 Nucleic acid-binding, OB-fold APT56_17580 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type APT56_17590 IPR036390 Winged helix DNA-binding domain superfamily APT56_17590 IPR015424 Pyridoxal phosphate-dependent transferase APT56_17590 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APT56_17590 IPR000524 Transcription regulator HTH, GntR APT56_17590 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_17590 IPR004839 Aminotransferase, class I/classII APT56_17595 IPR004711 Benzoate transporter APT56_17600 IPR029066 PLP-binding barrel APT56_17600 IPR001608 Alanine racemase, N-terminal APT56_17600 IPR011078 Pyridoxal phosphate homeostasis protein APT56_17605 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily APT56_17605 IPR041490 HTH-type transcriptional repressor KstR2, C-terminal APT56_17605 IPR001647 DNA-binding HTH domain, TetR-type APT56_17605 IPR009057 Homeobox-like domain superfamily APT56_17610 IPR016039 Thiolase-like APT56_17610 IPR020616 Thiolase, N-terminal APT56_17610 IPR020615 Thiolase, acyl-enzyme intermediate active site APT56_17610 IPR012793 Beta-ketoadipyl CoA thiolase APT56_17610 IPR020610 Thiolase, active site APT56_17610 IPR002155 Thiolase APT56_17610 IPR020613 Thiolase, conserved site APT56_17610 IPR020617 Thiolase, C-terminal APT56_17615 IPR000873 AMP-dependent synthetase/ligase APT56_17615 IPR020845 AMP-binding, conserved site APT56_17615 IPR042099 AMP-dependent synthetase-like superfamily APT56_17620 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein APT56_17620 IPR003439 ABC transporter-like APT56_17620 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_17620 IPR003593 AAA+ ATPase domain APT56_17620 IPR017871 ABC transporter, conserved site APT56_17640 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_17640 IPR003593 AAA+ ATPase domain APT56_17640 IPR017871 ABC transporter, conserved site APT56_17640 IPR003439 ABC transporter-like APT56_17640 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal APT56_17645 IPR014748 Enoyl-CoA hydratase, C-terminal APT56_17645 IPR029045 ClpP/crotonase-like domain superfamily APT56_17645 IPR001753 Enoyl-CoA hydratase/isomerase APT56_17655 IPR004363 Methylglyoxal synthase APT56_17655 IPR018148 Methylglyoxal synthase, active site APT56_17655 IPR011607 Methylglyoxal synthase-like domain APT56_17655 IPR036914 Methylglyoxal synthase-like domain superfamily APT56_17660 IPR007479 ISC system FeS cluster assembly, IscX APT56_17660 IPR036762 IscX-like superfamily APT56_17665 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria APT56_17665 IPR018298 Adrenodoxin, iron-sulphur binding site APT56_17665 IPR001055 Adrenodoxin APT56_17665 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain APT56_17665 IPR036010 2Fe-2S ferredoxin-like superfamily APT56_17665 IPR012675 Beta-grasp domain superfamily APT56_17670 IPR018181 Heat shock protein 70, conserved site APT56_17670 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily APT56_17670 IPR013126 Heat shock protein 70 family APT56_17670 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily APT56_17670 IPR010236 ISC system FeS cluster assembly, HscA chaperone APT56_17675 IPR001623 DnaJ domain APT56_17675 IPR036869 Chaperone J-domain superfamily APT56_17675 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain APT56_17675 IPR036386 HscB, C-terminal domain superfamily APT56_17675 IPR004640 Co-chaperone Hsc20 APT56_17680 IPR011302 Iron-binding protein IscA, proteobacteria APT56_17680 IPR000361 FeS cluster biogenesis APT56_17680 IPR016092 FeS cluster insertion protein APT56_17680 IPR017870 FeS cluster insertion, C-terminal, conserved site APT56_17680 IPR035903 HesB-like domain superfamily APT56_17685 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal APT56_17685 IPR011339 ISC system FeS cluster assembly, IscU scaffold APT56_17690 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APT56_17690 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site APT56_17690 IPR010240 Cysteine desulfurase IscS APT56_17690 IPR016454 Cysteine desulfurase APT56_17690 IPR015424 Pyridoxal phosphate-dependent transferase APT56_17690 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APT56_17690 IPR000192 Aminotransferase class V domain APT56_17695 IPR030489 Transcription regulator Rrf2-type, conserved site APT56_17695 IPR000944 Transcription regulator Rrf2-type APT56_17695 IPR010242 Transcription factor HTH, IscR APT56_17695 IPR036390 Winged helix DNA-binding domain superfamily APT56_17695 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_17700 IPR023485 Phosphotyrosine protein phosphatase I APT56_17700 IPR036196 Phosphotyrosine protein phosphatase I superfamily APT56_17700 IPR017867 Protein-tyrosine phosphatase, low molecular weight APT56_17705 IPR001943 UVR domain APT56_17705 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_17705 IPR001650 Helicase, C-terminal APT56_17705 IPR014001 Helicase superfamily 1/2, ATP-binding domain APT56_17705 IPR006935 Helicase/UvrB, N-terminal APT56_17705 IPR024759 UvrB, YAD/RRR-motif-containing domain APT56_17705 IPR041471 UvrB, interaction domain APT56_17705 IPR004807 UvrABC system, subunit B APT56_17705 IPR036876 UVR domain superfamily APT56_17710 IPR000796 Aspartate/other aminotransferase APT56_17710 IPR004839 Aminotransferase, class I/classII APT56_17710 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site APT56_17710 IPR015424 Pyridoxal phosphate-dependent transferase APT56_17710 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APT56_17710 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APT56_17715 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_17715 IPR036286 LexA/Signal peptidase-like superfamily APT56_17715 IPR006200 Transcription regulator LexA APT56_17715 IPR006199 LexA repressor, DNA-binding domain APT56_17715 IPR006197 Peptidase S24, LexA-like APT56_17715 IPR015927 Peptidase S24/S26A/S26B/S26C APT56_17715 IPR036390 Winged helix DNA-binding domain superfamily APT56_17715 IPR039418 LexA-like APT56_17720 IPR004815 Lon protease, bacterial/eukaryotic-type APT56_17720 IPR008269 Peptidase S16, Lon proteolytic domain APT56_17720 IPR003593 AAA+ ATPase domain APT56_17720 IPR003959 ATPase, AAA-type, core APT56_17720 IPR027543 Lon protease, bacterial APT56_17720 IPR027065 Lon protease APT56_17720 IPR003111 Lon, substrate-binding domain APT56_17720 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_17720 IPR008268 Peptidase S16, active site APT56_17720 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APT56_17720 IPR020568 Ribosomal protein S5 domain 2-type fold APT56_17720 IPR015947 PUA-like superfamily APT56_17725 IPR038366 Zinc finger, ClpX C4-type superfamily APT56_17725 IPR003959 ATPase, AAA-type, core APT56_17725 IPR019489 Clp ATPase, C-terminal APT56_17725 IPR003593 AAA+ ATPase domain APT56_17725 IPR004487 Clp protease, ATP-binding subunit ClpX APT56_17725 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_17725 IPR010603 Zinc finger, ClpX C4-type APT56_17730 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA APT56_17730 IPR001907 ATP-dependent Clp protease proteolytic subunit APT56_17730 IPR033135 ClpP, histidine active site APT56_17730 IPR029045 ClpP/crotonase-like domain superfamily APT56_17735 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain APT56_17735 IPR005215 Trigger factor APT56_17735 IPR008880 Trigger factor, C-terminal APT56_17735 IPR037041 Trigger factor, C-terminal domain superfamily APT56_17735 IPR008881 Trigger factor, ribosome-binding, bacterial APT56_17735 IPR036611 Trigger factor ribosome-binding domain superfamily APT56_17735 IPR027304 Trigger factor/SurA domain superfamily APT56_17740 IPR001915 Peptidase M48 APT56_17745 IPR020761 Uncharacterised protein family UPF0114, bacteria APT56_17745 IPR005134 Uncharacterised protein family UPF0114 APT56_17750 IPR012156 Cold shock, CspA APT56_17750 IPR002059 Cold-shock protein, DNA-binding APT56_17750 IPR012340 Nucleic acid-binding, OB-fold APT56_17750 IPR011129 Cold shock domain APT56_17750 IPR019844 Cold-shock (CSD) domain APT56_17760 IPR019844 Cold-shock (CSD) domain APT56_17760 IPR011129 Cold shock domain APT56_17760 IPR012156 Cold shock, CspA APT56_17760 IPR002059 Cold-shock protein, DNA-binding APT56_17760 IPR012340 Nucleic acid-binding, OB-fold APT56_17785 IPR006056 RidA family APT56_17785 IPR035959 RutC-like superfamily APT56_17785 IPR006175 YjgF/YER057c/UK114 family APT56_17790 IPR042208 D-serine dehydratase-like domain superfamily APT56_17790 IPR029066 PLP-binding barrel APT56_17790 IPR001608 Alanine racemase, N-terminal APT56_17790 IPR026956 D-serine dehydratase-like domain APT56_17795 IPR005119 LysR, substrate-binding APT56_17795 IPR000847 Transcription regulator HTH, LysR APT56_17795 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_17795 IPR036390 Winged helix DNA-binding domain superfamily APT56_17810 IPR013572 Transcription regulator MAATS, C-terminal APT56_17810 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily APT56_17810 IPR001647 DNA-binding HTH domain, TetR-type APT56_17810 IPR009057 Homeobox-like domain superfamily APT56_17810 IPR023772 DNA-binding HTH domain, TetR-type, conserved site APT56_17835 IPR013785 Aldolase-type TIM barrel APT56_17835 IPR006218 DAHP synthetase I/KDSA APT56_17835 IPR006269 3-deoxy-8-phosphooctulonate synthase APT56_17850 IPR023271 Aquaporin-like APT56_17850 IPR022357 Major intrinsic protein, conserved site APT56_17850 IPR000425 Major intrinsic protein APT56_17850 IPR023743 Aquaporin Z APT56_17850 IPR034294 Aquaporin transporter APT56_17860 IPR036318 FAD-binding, type PCMH-like superfamily APT56_17860 IPR016167 FAD-binding, type PCMH, subdomain 1 APT56_17860 IPR016166 FAD-binding domain, PCMH-type APT56_17860 IPR016169 FAD-binding, type PCMH, subdomain 2 APT56_17860 IPR004113 FAD-linked oxidase, C-terminal APT56_17860 IPR016164 FAD-linked oxidase-like, C-terminal APT56_17860 IPR006094 FAD linked oxidase, N-terminal APT56_17865 IPR036188 FAD/NAD(P)-binding domain superfamily APT56_17865 IPR006076 FAD dependent oxidoreductase APT56_17865 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily APT56_17865 IPR031656 Alpha-glycerophosphate oxidase, C-terminal APT56_17865 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase APT56_17870 IPR005999 Glycerol kinase APT56_17870 IPR018484 Carbohydrate kinase, FGGY, N-terminal APT56_17870 IPR018483 Carbohydrate kinase, FGGY, conserved site APT56_17870 IPR018485 Carbohydrate kinase, FGGY, C-terminal APT56_17870 IPR000577 Carbohydrate kinase, FGGY APT56_17875 IPR000849 Sugar phosphate transporter APT56_17875 IPR036259 MFS transporter superfamily APT56_17875 IPR020846 Major facilitator superfamily domain APT56_17875 IPR011701 Major facilitator superfamily APT56_17905 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APT56_17905 IPR004839 Aminotransferase, class I/classII APT56_17905 IPR015424 Pyridoxal phosphate-dependent transferase APT56_17905 IPR019881 Diaminopimelate aminotransferase, DapL, Desulfovibrio-type APT56_17905 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APT56_17905 IPR019942 LL-diaminopimelate aminotransferase/aminotransferase ALD1 APT56_17905 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site APT56_17910 IPR018357 Hexapeptide transferase, conserved site APT56_17910 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 APT56_17910 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily APT56_17910 IPR011004 Trimeric LpxA-like superfamily APT56_17910 IPR001451 Hexapeptide repeat APT56_17910 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family APT56_17915 IPR011650 Peptidase M20, dimerisation domain APT56_17915 IPR002933 Peptidase M20 APT56_17915 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria APT56_17915 IPR036264 Bacterial exopeptidase dimerisation domain APT56_17920 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT56_17920 IPR002052 DNA methylase, N-6 adenine-specific, conserved site APT56_17920 IPR004556 Methyltransferase HemK-like APT56_17920 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase APT56_17920 IPR007848 Methyltransferase small domain APT56_17925 IPR003593 AAA+ ATPase domain APT56_17925 IPR032781 ABC-transporter extension domain APT56_17925 IPR003439 ABC transporter-like APT56_17925 IPR017871 ABC transporter, conserved site APT56_17925 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_17940 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily APT56_17940 IPR037066 TonB-dependent receptor, plug domain superfamily APT56_17940 IPR012910 TonB-dependent receptor, plug domain APT56_17945 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily APT56_17945 IPR037066 TonB-dependent receptor, plug domain superfamily APT56_17945 IPR012910 TonB-dependent receptor, plug domain APT56_17950 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase APT56_17950 IPR004852 Di-haem cytochrome c peroxidase APT56_17950 IPR036909 Cytochrome c-like domain superfamily APT56_17950 IPR009056 Cytochrome c-like domain APT56_17960 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_17960 IPR014016 UvrD-like helicase, ATP-binding domain APT56_17960 IPR000212 DNA helicase, UvrD/REP type APT56_17960 IPR013986 DExx box DNA helicase domain superfamily APT56_17960 IPR034739 UvrD/AddA helicase, N-terminal APT56_17960 IPR014017 UvrD-like DNA helicase, C-terminal APT56_17960 IPR005753 DNA helicase, ATP-dependent, UvrD type APT56_17965 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain APT56_17965 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain APT56_17965 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger APT56_17975 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT56_17975 IPR004573 rRNA small subunit methyltransferase B APT56_17975 IPR023267 RNA (C5-cytosine) methyltransferase APT56_17975 IPR035926 NusB-like superfamily APT56_17975 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type APT56_17975 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site APT56_17975 IPR006027 NusB/RsmB/TIM44 APT56_17980 IPR036477 Formyl transferase, N-terminal domain superfamily APT56_17980 IPR002376 Formyl transferase, N-terminal APT56_17980 IPR004607 Phosphoribosylglycinamide formyltransferase APT56_17980 IPR001555 Phosphoribosylglycinamide formyltransferase, active site APT56_17985 IPR002606 Riboflavin kinase, bacterial APT56_17985 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT56_17985 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic APT56_17985 IPR023468 Riboflavin kinase APT56_17985 IPR023465 Riboflavin kinase domain superfamily APT56_17985 IPR015864 FAD synthetase APT56_17990 IPR023585 Isoleucine-tRNA ligase, type 1 APT56_17990 IPR010663 Zinc finger, FPG/IleRS-type APT56_17990 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain APT56_17990 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding APT56_17990 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT56_17990 IPR002301 Isoleucine-tRNA ligase APT56_17990 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain APT56_17990 IPR002300 Aminoacyl-tRNA synthetase, class Ia APT56_17990 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding APT56_17990 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site APT56_17995 IPR001872 Peptidase A8, signal peptidase II APT56_18000 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal APT56_18000 IPR035929 CoaB-like superfamily APT56_18000 IPR036551 Flavin prenyltransferase-like APT56_18000 IPR003382 Flavoprotein APT56_18000 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC APT56_18005 IPR005064 Bordetella uptake gene APT56_18005 IPR042100 Bordetella uptake gene, domain 1 APT56_18020 IPR029062 Class I glutamine amidotransferase-like APT56_18020 IPR005320 Peptidase S51 APT56_18020 IPR023172 Peptidase S51, dipeptidase E APT56_18050 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal APT56_18050 IPR013785 Aldolase-type TIM barrel APT56_18050 IPR023663 NADPH dehydrogenase APT56_18055 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type APT56_18055 IPR003593 AAA+ ATPase domain APT56_18055 IPR014343 Ectoine/hydroxyectoine ABC transporter, ATP-binding protein APT56_18055 IPR017871 ABC transporter, conserved site APT56_18055 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_18055 IPR003439 ABC transporter-like APT56_18060 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_18060 IPR035906 MetI-like superfamily APT56_18060 IPR014341 Ectoine/hydroxyectoine ABC transporter, permease protein EhuD APT56_18060 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain APT56_18065 IPR035906 MetI-like superfamily APT56_18065 IPR014342 Ectoine/hydroxyectoine ABC transporter, permease protein EhuC APT56_18065 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_18065 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain APT56_18070 IPR014337 Ectoine/Hydroxyectoine ABC transporter, substrate-binding protein EhuB APT56_18070 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APT56_18080 IPR036291 NAD(P)-binding domain superfamily APT56_18080 IPR003462 Ornithine cyclodeaminase/mu-crystallin APT56_18080 IPR023401 Ornithine cyclodeaminase, N-terminal APT56_18085 IPR019904 Peroxiredoxin OsmC APT56_18085 IPR036102 OsmC/Ohr superfamily APT56_18085 IPR003718 OsmC/Ohr family APT56_18085 IPR015946 K homology domain-like, alpha/beta APT56_18090 IPR001046 NRAMP family APT56_18095 IPR003423 Outer membrane efflux protein APT56_18095 IPR010131 RND efflux system, outer membrane lipoprotein, NodT APT56_18100 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APT56_18100 IPR006143 RND efflux pump, membrane fusion protein APT56_18115 IPR037416 Nodulation protein D, PBP2 APT56_18115 IPR000847 Transcription regulator HTH, LysR APT56_18115 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_18115 IPR005119 LysR, substrate-binding APT56_18115 IPR036390 Winged helix DNA-binding domain superfamily APT56_18130 IPR020846 Major facilitator superfamily domain APT56_18130 IPR036259 MFS transporter superfamily APT56_18130 IPR011701 Major facilitator superfamily APT56_18140 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_18140 IPR003439 ABC transporter-like APT56_18140 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein APT56_18140 IPR017871 ABC transporter, conserved site APT56_18140 IPR003593 AAA+ ATPase domain APT56_18145 IPR003439 ABC transporter-like APT56_18145 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal APT56_18145 IPR017871 ABC transporter, conserved site APT56_18145 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_18145 IPR003593 AAA+ ATPase domain APT56_18150 IPR001851 ABC transporter, permease APT56_18150 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal APT56_18155 IPR001851 ABC transporter, permease APT56_18160 IPR000709 Leu/Ile/Val-binding protein APT56_18160 IPR028081 Leucine-binding protein domain APT56_18160 IPR028082 Periplasmic binding protein-like I APT56_18165 IPR015590 Aldehyde dehydrogenase domain APT56_18165 IPR016160 Aldehyde dehydrogenase, cysteine active site APT56_18165 IPR010985 Ribbon-helix-helix APT56_18165 IPR029041 FAD-linked oxidoreductase-like APT56_18165 IPR013321 Arc-type ribbon-helix-helix APT56_18165 IPR025703 Bifunctional protein PutA APT56_18165 IPR016161 Aldehyde/histidinol dehydrogenase APT56_18165 IPR002872 Proline dehydrogenase domain APT56_18165 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 APT56_18165 IPR016162 Aldehyde dehydrogenase, N-terminal APT56_18165 IPR029510 Aldehyde dehydrogenase, glutamic acid active site APT56_18165 IPR024090 Proline dehydrogenase PutA, domain I APT56_18165 IPR016163 Aldehyde dehydrogenase, C-terminal APT56_18165 IPR024089 Proline dehydrogenase PutA, domain I/II APT56_18165 IPR024082 Proline dehydrogenase PutA, domain II APT56_18165 IPR041349 Proline utilization A proline dehydrogenase N-terminal domain APT56_18175 IPR003399 Mce/MlaD APT56_18180 IPR007498 Intermembrane transport protein PqiA-like APT56_18180 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type APT56_18185 IPR003593 AAA+ ATPase domain APT56_18185 IPR003959 ATPase, AAA-type, core APT56_18185 IPR041546 ClpA/ClpB, AAA lid domain APT56_18185 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_18185 IPR036628 Clp, N-terminal domain superfamily APT56_18185 IPR004176 Clp, N-terminal APT56_18185 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA APT56_18185 IPR001270 ClpA/B family APT56_18185 IPR019489 Clp ATPase, C-terminal APT56_18185 IPR028299 ClpA/B, conserved site 2 APT56_18185 IPR018368 ClpA/B, conserved site 1 APT56_18190 IPR036950 Penicillin binding protein transglycosylase domain APT56_18190 IPR001460 Penicillin-binding protein, transpeptidase APT56_18190 IPR011815 Penicillin-binding protein 1C APT56_18190 IPR009647 Penicillin-binding, C-terminal APT56_18190 IPR012338 Beta-lactamase/transpeptidase-like APT56_18190 IPR001264 Glycosyl transferase, family 51 APT56_18190 IPR023346 Lysozyme-like domain superfamily APT56_18195 IPR041462 Bacterial Alpha-2-macroglobulin, MG6 domain APT56_18195 IPR041203 Bacterial Alpha-2-macroglobulin, MG5 domain APT56_18195 IPR021868 Alpha-2-macroglobulin MG3 domain APT56_18195 IPR002890 Macroglobulin domain APT56_18195 IPR040639 Alpha-2-macroglobulin, MG1 domain APT56_18195 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid APT56_18195 IPR011625 Alpha-2-macroglobulin, bait region domain APT56_18195 IPR026284 Alpha-2-macroglobulin, bacteria APT56_18195 IPR041246 Bacterial alpha-2-macroglobulin MG10 domain APT56_18195 IPR001599 Alpha-2-macroglobulin APT56_18200 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like APT56_18200 IPR003769 Adaptor protein ClpS, core APT56_18200 IPR022935 ATP-dependent Clp protease adaptor protein ClpS APT56_18205 IPR012340 Nucleic acid-binding, OB-fold APT56_18205 IPR002059 Cold-shock protein, DNA-binding APT56_18205 IPR019844 Cold-shock (CSD) domain APT56_18205 IPR011129 Cold shock domain APT56_18205 IPR012156 Cold shock, CspA APT56_18215 IPR020613 Thiolase, conserved site APT56_18215 IPR020616 Thiolase, N-terminal APT56_18215 IPR020610 Thiolase, active site APT56_18215 IPR020617 Thiolase, C-terminal APT56_18215 IPR016039 Thiolase-like APT56_18215 IPR002155 Thiolase APT56_18215 IPR012793 Beta-ketoadipyl CoA thiolase APT56_18215 IPR020615 Thiolase, acyl-enzyme intermediate active site APT56_18220 IPR001807 Chloride channel, voltage gated APT56_18220 IPR014743 Chloride channel, core APT56_18220 IPR023861 Chloride channel, ClcA APT56_18225 IPR004090 Chemotaxis methyl-accepting receptor APT56_18225 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site APT56_18225 IPR003660 HAMP domain APT56_18225 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain APT56_18225 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding APT56_18225 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily APT56_18230 IPR019832 Manganese/iron superoxide dismutase, C-terminal APT56_18230 IPR019833 Manganese/iron superoxide dismutase, binding site APT56_18230 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily APT56_18230 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily APT56_18230 IPR019831 Manganese/iron superoxide dismutase, N-terminal APT56_18230 IPR001189 Manganese/iron superoxide dismutase APT56_18240 IPR020579 Exonuclease VII, large subunit, C-terminal APT56_18240 IPR003753 Exonuclease VII, large subunit APT56_18240 IPR025824 OB-fold nucleic acid binding domain APT56_18245 IPR002898 MotA/TolQ/ExbB proton channel APT56_18255 IPR003758 Tetraacyldisaccharide 4'-kinase APT56_18255 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_18260 IPR010771 Intracellular growth attenuator IgaA APT56_18265 IPR005651 Trm112-like APT56_18270 IPR029044 Nucleotide-diphospho-sugar transferases APT56_18270 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase APT56_18270 IPR003329 Acylneuraminate cytidylyltransferase APT56_18275 IPR007862 Adenylate kinase, active site lid domain APT56_18275 IPR033690 Adenylate kinase, conserved site APT56_18275 IPR000850 Adenylate kinase/UMP-CMP kinase APT56_18275 IPR006259 Adenylate kinase subfamily APT56_18275 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_18280 IPR002347 Short-chain dehydrogenase/reductase SDR APT56_18280 IPR020904 Short-chain dehydrogenase/reductase, conserved site APT56_18280 IPR036291 NAD(P)-binding domain superfamily APT56_18285 IPR004268 Peptidoglycan biosynthesis protein MurJ APT56_18295 IPR002583 Ribosomal protein S20 APT56_18295 IPR036510 Ribosomal protein S20 superfamily APT56_18300 IPR037414 Transcriptional activator protein LysR, PBP2 domain APT56_18300 IPR036390 Winged helix DNA-binding domain superfamily APT56_18300 IPR005119 LysR, substrate-binding APT56_18300 IPR000847 Transcription regulator HTH, LysR APT56_18300 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_18305 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal APT56_18305 IPR000183 Ornithine/DAP/Arg decarboxylase APT56_18305 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site APT56_18305 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal APT56_18305 IPR029066 PLP-binding barrel APT56_18305 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site APT56_18305 IPR002986 Diaminopimelate decarboxylase, LysA APT56_18305 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal APT56_18310 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily APT56_18310 IPR005000 HpcH/HpaI aldolase/citrate lyase domain APT56_18310 IPR017648 5-keto-4-deoxy-D-glucarate aldolase APT56_18310 IPR040442 Pyruvate kinase-like domain superfamily APT56_18315 IPR005064 Bordetella uptake gene APT56_18315 IPR042100 Bordetella uptake gene, domain 1 APT56_18320 IPR036111 Malate/L-sulfolactate/L-lactate dehydrogenase-like superfamily APT56_18320 IPR003767 Malate/L-lactate dehydrogenase-like APT56_18325 IPR011711 GntR, C-terminal APT56_18325 IPR036390 Winged helix DNA-binding domain superfamily APT56_18325 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_18325 IPR008920 Transcription regulator FadR/GntR, C-terminal APT56_18325 IPR000524 Transcription regulator HTH, GntR APT56_18335 IPR005064 Bordetella uptake gene APT56_18335 IPR042100 Bordetella uptake gene, domain 1 APT56_18345 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain APT56_18345 IPR036291 NAD(P)-binding domain superfamily APT56_18345 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain APT56_18360 IPR003593 AAA+ ATPase domain APT56_18360 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_18360 IPR004504 DNA repair protein RadA APT56_18360 IPR020568 Ribosomal protein S5 domain 2-type fold APT56_18360 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APT56_18360 IPR041166 LapB, rubredoxin metal binding domain APT56_18360 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain APT56_18375 IPR011984 3,4-dihydroxyphenylacetate 2,3-dioxygenase APT56_18375 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B APT56_18380 IPR011985 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase APT56_18380 IPR015590 Aldehyde dehydrogenase domain APT56_18380 IPR016160 Aldehyde dehydrogenase, cysteine active site APT56_18380 IPR016162 Aldehyde dehydrogenase, N-terminal APT56_18380 IPR029510 Aldehyde dehydrogenase, glutamic acid active site APT56_18380 IPR016163 Aldehyde dehydrogenase, C-terminal APT56_18380 IPR016161 Aldehyde/histidinol dehydrogenase APT56_18385 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily APT56_18385 IPR011234 Fumarylacetoacetase-like, C-terminal APT56_18385 IPR012686 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit APT56_18385 IPR012684 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit APT56_18390 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily APT56_18390 IPR012684 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit APT56_18390 IPR012686 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit APT56_18390 IPR011234 Fumarylacetoacetase-like, C-terminal APT56_18395 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily APT56_18395 IPR012690 2-oxo-hepta-4-ene-1,7-dioic acid hydratase APT56_18395 IPR011234 Fumarylacetoacetase-like, C-terminal APT56_18400 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily APT56_18400 IPR040442 Pyruvate kinase-like domain superfamily APT56_18400 IPR023701 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase, Enterobacteriales APT56_18400 IPR012689 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase APT56_18400 IPR005000 HpcH/HpaI aldolase/citrate lyase domain APT56_18405 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase APT56_18405 IPR036291 NAD(P)-binding domain superfamily APT56_18405 IPR020904 Short-chain dehydrogenase/reductase, conserved site APT56_18405 IPR002347 Short-chain dehydrogenase/reductase SDR APT56_18410 IPR029066 PLP-binding barrel APT56_18410 IPR001608 Alanine racemase, N-terminal APT56_18410 IPR011079 Alanine racemase, C-terminal APT56_18410 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal APT56_18410 IPR000821 Alanine racemase APT56_18410 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site APT56_18420 IPR033904 Trans-Isoprenyl Diphosphate Synthases, head-to-head APT56_18420 IPR019845 Squalene/phytoene synthase, conserved site APT56_18420 IPR008949 Isoprenoid synthase domain superfamily APT56_18430 IPR003691 Putative fluoride ion transporter CrcB APT56_18445 IPR023100 D-aminoacylase, insert domain superfamily APT56_18445 IPR013108 Amidohydrolase 3 APT56_18445 IPR011059 Metal-dependent hydrolase, composite domain superfamily APT56_18445 IPR032466 Metal-dependent hydrolase APT56_18450 IPR036390 Winged helix DNA-binding domain superfamily APT56_18450 IPR005119 LysR, substrate-binding APT56_18450 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_18450 IPR000847 Transcription regulator HTH, LysR APT56_18460 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily APT56_18460 IPR013785 Aldolase-type TIM barrel APT56_18460 IPR009215 TIM-barrel domain, IGPS-like APT56_18465 IPR008322 Uncharacterised protein family UPF0261 APT56_18490 IPR018368 ClpA/B, conserved site 1 APT56_18490 IPR003959 ATPase, AAA-type, core APT56_18490 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_18490 IPR001270 ClpA/B family APT56_18490 IPR017730 Chaperonin ClpB APT56_18490 IPR041546 ClpA/ClpB, AAA lid domain APT56_18490 IPR036628 Clp, N-terminal domain superfamily APT56_18490 IPR028299 ClpA/B, conserved site 2 APT56_18490 IPR019489 Clp ATPase, C-terminal APT56_18490 IPR003593 AAA+ ATPase domain APT56_18490 IPR004176 Clp, N-terminal APT56_18500 IPR018490 Cyclic nucleotide-binding-like APT56_18500 IPR000595 Cyclic nucleotide-binding domain APT56_18500 IPR014710 RmlC-like jelly roll fold APT56_18500 IPR018335 Transcription regulator HTH, Crp-type, conserved site APT56_18500 IPR036390 Winged helix DNA-binding domain superfamily APT56_18500 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_18500 IPR012318 Crp-type HTH domain APT56_18510 IPR005829 Sugar transporter, conserved site APT56_18510 IPR020846 Major facilitator superfamily domain APT56_18510 IPR005828 Major facilitator, sugar transporter-like APT56_18510 IPR004736 MFS transporter, metabolite:H symporter APT56_18510 IPR036259 MFS transporter superfamily APT56_18515 IPR004675 Alkylhydroperoxidase AhpD core APT56_18515 IPR029032 AhpD-like APT56_18515 IPR003779 Carboxymuconolactone decarboxylase-like APT56_18525 IPR000086 NUDIX hydrolase domain APT56_18525 IPR020084 NUDIX hydrolase, conserved site APT56_18525 IPR015797 NUDIX hydrolase-like domain superfamily APT56_18525 IPR020476 NUDIX hydrolase APT56_18530 IPR013126 Heat shock protein 70 family APT56_18530 IPR018181 Heat shock protein 70, conserved site APT56_18530 IPR042054 YegD-like APT56_18545 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily APT56_18545 IPR012910 TonB-dependent receptor, plug domain APT56_18545 IPR010105 TonB-dependent siderophore receptor APT56_18545 IPR010917 TonB-dependent receptor, conserved site APT56_18545 IPR037066 TonB-dependent receptor, plug domain superfamily APT56_18545 IPR000531 TonB-dependent receptor-like, beta-barrel APT56_18545 IPR039423 TonB-dependent receptor-like APT56_18550 IPR039423 TonB-dependent receptor-like APT56_18550 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily APT56_18550 IPR010917 TonB-dependent receptor, conserved site APT56_18550 IPR010105 TonB-dependent siderophore receptor APT56_18550 IPR000531 TonB-dependent receptor-like, beta-barrel APT56_18550 IPR012910 TonB-dependent receptor, plug domain APT56_18550 IPR037066 TonB-dependent receptor, plug domain superfamily APT56_18560 IPR002818 DJ-1/PfpI APT56_18560 IPR029062 Class I glutamine amidotransferase-like APT56_18565 IPR011701 Major facilitator superfamily APT56_18565 IPR020846 Major facilitator superfamily domain APT56_18565 IPR036259 MFS transporter superfamily APT56_18575 IPR024530 Putative quorum-sensing-regulated virulence factor APT56_18590 IPR004045 Glutathione S-transferase, N-terminal APT56_18590 IPR036282 Glutathione S-transferase, C-terminal domain superfamily APT56_18590 IPR004046 Glutathione S-transferase, C-terminal APT56_18590 IPR036249 Thioredoxin-like superfamily APT56_18590 IPR010987 Glutathione S-transferase, C-terminal-like APT56_18610 IPR042100 Bordetella uptake gene, domain 1 APT56_18610 IPR005064 Bordetella uptake gene APT56_18615 IPR032466 Metal-dependent hydrolase APT56_18615 IPR006680 Amidohydrolase-related APT56_18620 IPR005064 Bordetella uptake gene APT56_18620 IPR042100 Bordetella uptake gene, domain 1 APT56_18625 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein APT56_18625 IPR010203 Regulator of ribonuclease activity A APT56_18625 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily APT56_18630 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain APT56_18630 IPR036291 NAD(P)-binding domain superfamily APT56_18630 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site APT56_18630 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain APT56_18640 IPR042100 Bordetella uptake gene, domain 1 APT56_18640 IPR005064 Bordetella uptake gene APT56_18645 IPR042100 Bordetella uptake gene, domain 1 APT56_18645 IPR005064 Bordetella uptake gene APT56_18650 IPR013658 SMP-30/Gluconolactonase/LRE-like region APT56_18650 IPR011042 Six-bladed beta-propeller, TolB-like APT56_18650 IPR006311 Twin-arginine translocation pathway, signal sequence APT56_18650 IPR005511 Senescence marker protein-30 (SMP-30) APT56_18670 IPR004304 Acetamidase/Formamidase APT56_18690 IPR000485 AsnC-type HTH domain APT56_18690 IPR011008 Dimeric alpha-beta barrel APT56_18690 IPR019888 Transcription regulator AsnC-type APT56_18690 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain APT56_18690 IPR019885 Transcription regulator HTH, AsnC-type, conserved site APT56_18690 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_18690 IPR036390 Winged helix DNA-binding domain superfamily APT56_18690 IPR011991 ArsR-like helix-turn-helix domain APT56_18700 IPR003593 AAA+ ATPase domain APT56_18700 IPR003439 ABC transporter-like APT56_18700 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_18700 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal APT56_18700 IPR017871 ABC transporter, conserved site APT56_18705 IPR023765 Solute-binding protein family 5, conserved site APT56_18705 IPR000914 Solute-binding protein family 5 domain APT56_18705 IPR039424 Solute-binding protein family 5 APT56_18705 IPR030678 Peptide/nickel binding protein, MppA-type APT56_18710 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_18710 IPR035906 MetI-like superfamily APT56_18725 IPR000182 GNAT domain APT56_18725 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT56_18725 IPR017926 Glutamine amidotransferase APT56_18725 IPR011257 DNA glycosylase APT56_18725 IPR029062 Class I glutamine amidotransferase-like APT56_18725 IPR005019 Methyladenine glycosylase APT56_18725 IPR016181 Acyl-CoA N-acyltransferase APT56_18725 IPR025777 GMP synthetase ATP pyrophosphatase domain APT56_18725 IPR001674 GMP synthase, C-terminal APT56_18745 IPR011257 DNA glycosylase APT56_18745 IPR029062 Class I glutamine amidotransferase-like APT56_18745 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT56_18745 IPR025777 GMP synthetase ATP pyrophosphatase domain APT56_18745 IPR001674 GMP synthase, C-terminal APT56_18745 IPR000182 GNAT domain APT56_18745 IPR017926 Glutamine amidotransferase APT56_18745 IPR016181 Acyl-CoA N-acyltransferase APT56_18745 IPR005019 Methyladenine glycosylase APT56_18750 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT56_18750 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase APT56_18755 IPR031304 Transglycosylase SLT domain 2 APT56_18755 IPR023346 Lysozyme-like domain superfamily APT56_18755 IPR011757 Lytic transglycosylase MltB APT56_18765 IPR000847 Transcription regulator HTH, LysR APT56_18765 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_18765 IPR036390 Winged helix DNA-binding domain superfamily APT56_18765 IPR005119 LysR, substrate-binding APT56_18770 IPR028892 Adenine deaminase type 2 APT56_18770 IPR006330 Adenosine/adenine deaminase APT56_18770 IPR001365 Adenosine/AMP deaminase domain APT56_18770 IPR032466 Metal-dependent hydrolase APT56_18775 IPR019826 Carboxylesterase type B, active site APT56_18775 IPR029058 Alpha/Beta hydrolase fold APT56_18775 IPR002018 Carboxylesterase, type B APT56_18780 IPR042100 Bordetella uptake gene, domain 1 APT56_18780 IPR005064 Bordetella uptake gene APT56_18785 IPR041347 MftR, C-terminal APT56_18785 IPR023772 DNA-binding HTH domain, TetR-type, conserved site APT56_18785 IPR001647 DNA-binding HTH domain, TetR-type APT56_18785 IPR009057 Homeobox-like domain superfamily APT56_18790 IPR011701 Major facilitator superfamily APT56_18790 IPR020846 Major facilitator superfamily domain APT56_18790 IPR005829 Sugar transporter, conserved site APT56_18790 IPR004638 Drug resistance transporter EmrB-like APT56_18790 IPR036259 MFS transporter superfamily APT56_18795 IPR017439 Amidohydrolase APT56_18795 IPR036264 Bacterial exopeptidase dimerisation domain APT56_18795 IPR002933 Peptidase M20 APT56_18795 IPR011650 Peptidase M20, dimerisation domain APT56_18800 IPR005064 Bordetella uptake gene APT56_18800 IPR042100 Bordetella uptake gene, domain 1 APT56_18810 IPR000182 GNAT domain APT56_18810 IPR016181 Acyl-CoA N-acyltransferase APT56_18815 IPR002811 Aspartate dehydrogenase APT56_18815 IPR036291 NAD(P)-binding domain superfamily APT56_18815 IPR011182 L-aspartate dehydrogenase APT56_18815 IPR020626 L-aspartate dehydrogenase, prokaryotic APT56_18815 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding APT56_18820 IPR036640 ABC transporter type 1, transmembrane domain superfamily APT56_18820 IPR011527 ABC transporter type 1, transmembrane domain APT56_18820 IPR017871 ABC transporter, conserved site APT56_18820 IPR003593 AAA+ ATPase domain APT56_18820 IPR003439 ABC transporter-like APT56_18820 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_18830 IPR032466 Metal-dependent hydrolase APT56_18830 IPR006680 Amidohydrolase-related APT56_18835 IPR005064 Bordetella uptake gene APT56_18835 IPR042100 Bordetella uptake gene, domain 1 APT56_18840 IPR029787 Nucleotide cyclase APT56_18840 IPR035919 EAL domain superfamily APT56_18840 IPR001633 EAL domain APT56_18840 IPR005330 MHYT domain APT56_18840 IPR000160 GGDEF domain APT56_18845 IPR036986 RNA-binding S4 domain superfamily APT56_18845 IPR002942 RNA-binding S4 domain APT56_18845 IPR025708 Heat shock protein 15 APT56_18850 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_18850 IPR022488 Polyphosphate kinase-2-related APT56_18850 IPR022486 Polyphosphate kinase 2, PA0141 APT56_18865 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme APT56_18865 IPR015424 Pyridoxal phosphate-dependent transferase APT56_18865 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APT56_18865 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APT56_18865 IPR006237 L-methionine gamma-lyase APT56_18870 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_18870 IPR035906 MetI-like superfamily APT56_18875 IPR003593 AAA+ ATPase domain APT56_18875 IPR026253 Methionine import ATP-binding protein MetN APT56_18875 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain APT56_18875 IPR017871 ABC transporter, conserved site APT56_18875 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal APT56_18875 IPR003439 ABC transporter-like APT56_18875 IPR018449 NIL domain APT56_18875 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_18880 IPR004872 Lipoprotein NlpA family APT56_18890 IPR001466 Beta-lactamase-related APT56_18890 IPR001586 Beta-lactamase, class-C active site APT56_18890 IPR012338 Beta-lactamase/transpeptidase-like APT56_18895 IPR023080 D-amino acid dehydrogenase DadA APT56_18895 IPR036188 FAD/NAD(P)-binding domain superfamily APT56_18895 IPR006076 FAD dependent oxidoreductase APT56_18905 IPR003719 Phenazine biosynthesis PhzF protein APT56_18910 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_18910 IPR000524 Transcription regulator HTH, GntR APT56_18910 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APT56_18910 IPR015424 Pyridoxal phosphate-dependent transferase APT56_18910 IPR004839 Aminotransferase, class I/classII APT56_18910 IPR036390 Winged helix DNA-binding domain superfamily APT56_18915 IPR012675 Beta-grasp domain superfamily APT56_18915 IPR001433 Oxidoreductase FAD/NAD(P)-binding APT56_18915 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain APT56_18915 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain APT56_18915 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain APT56_18915 IPR017927 FAD-binding domain, ferredoxin reductase-type APT56_18915 IPR036010 2Fe-2S ferredoxin-like superfamily APT56_18915 IPR017938 Riboflavin synthase-like beta-barrel APT56_18915 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site APT56_18925 IPR011008 Dimeric alpha-beta barrel APT56_18925 IPR006314 Dyp-type peroxidase APT56_18930 IPR000073 Alpha/beta hydrolase fold-1 APT56_18930 IPR000639 Epoxide hydrolase-like APT56_18930 IPR029058 Alpha/Beta hydrolase fold APT56_18945 IPR016220 Methylphosphotriester-DNA alkyltransferase, AdaA APT56_18945 IPR035451 Ada-like domain superfamily APT56_18945 IPR018060 DNA binding HTH domain, AraC-type APT56_18945 IPR004026 Ada DNA repair, metal-binding APT56_18945 IPR009057 Homeobox-like domain superfamily APT56_18945 IPR018062 HTH domain AraC-type, conserved site APT56_18955 IPR041581 Glyoxalase-like domain, group 6 APT56_18955 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APT56_18955 IPR037523 Vicinal oxygen chelate (VOC) domain APT56_18965 IPR010126 Esterase, PHB depolymerase APT56_18965 IPR029058 Alpha/Beta hydrolase fold APT56_18975 IPR005744 Hly-III APT56_18975 IPR004254 AdipoR/Haemolysin-III-related APT56_19000 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site APT56_19000 IPR039004 Carnitine monooxygenase oxygenase subunit APT56_19000 IPR017941 Rieske [2Fe-2S] iron-sulphur domain APT56_19000 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit APT56_19000 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily APT56_19000 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain APT56_19015 IPR016039 Thiolase-like APT56_19015 IPR006162 Phosphopantetheine attachment site APT56_19015 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding APT56_19015 IPR020806 Polyketide synthase, phosphopantetheine-binding domain APT56_19015 IPR009081 Phosphopantetheine binding ACP domain APT56_19015 IPR036291 NAD(P)-binding domain superfamily APT56_19015 IPR020843 Polyketide synthase, enoylreductase domain APT56_19015 IPR032821 Ketoacyl-synthetase, C-terminal extension APT56_19015 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain APT56_19015 IPR014030 Beta-ketoacyl synthase, N-terminal APT56_19015 IPR014031 Beta-ketoacyl synthase, C-terminal APT56_19015 IPR018201 Beta-ketoacyl synthase, active site APT56_19015 IPR013968 Polyketide synthase, ketoreductase domain APT56_19015 IPR036299 Polyketide synthase, docking domain superfmaily APT56_19015 IPR011032 GroES-like superfamily APT56_19015 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase APT56_19015 IPR014043 Acyl transferase APT56_19015 IPR020807 Polyketide synthase, dehydratase domain APT56_19015 IPR036736 ACP-like superfamily APT56_19015 IPR001227 Acyl transferase domain superfamily APT56_19015 IPR042104 Polyketide synthase, dehydratase domain superfamily APT56_19015 IPR013154 Alcohol dehydrogenase, N-terminal APT56_19025 IPR042099 AMP-dependent synthetase-like superfamily APT56_19025 IPR000873 AMP-dependent synthetase/ligase APT56_19025 IPR020845 AMP-binding, conserved site APT56_19025 IPR020459 AMP-binding APT56_19025 IPR025110 AMP-binding enzyme, C-terminal domain APT56_19030 IPR004682 TRAP transporter solute receptor, DctP family APT56_19030 IPR018389 TRAP transporter solute receptor DctP/TeaA APT56_19030 IPR038404 TRAP transporter solute receptor DctP superfamily APT56_19040 IPR004681 TRAP transporter large membrane protein DctM APT56_19040 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit APT56_19045 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_19045 IPR011006 CheY-like superfamily APT56_19045 IPR000792 Transcription regulator LuxR, C-terminal APT56_19045 IPR001789 Signal transduction response regulator, receiver domain APT56_19055 IPR020617 Thiolase, C-terminal APT56_19055 IPR020610 Thiolase, active site APT56_19055 IPR002155 Thiolase APT56_19055 IPR016039 Thiolase-like APT56_19055 IPR020615 Thiolase, acyl-enzyme intermediate active site APT56_19055 IPR020616 Thiolase, N-terminal APT56_19055 IPR020613 Thiolase, conserved site APT56_19065 IPR036249 Thioredoxin-like superfamily APT56_19065 IPR004045 Glutathione S-transferase, N-terminal APT56_19065 IPR036282 Glutathione S-transferase, C-terminal domain superfamily APT56_19070 IPR000412 ABC-2 transporter APT56_19070 IPR013525 ABC-2 type transporter APT56_19075 IPR003439 ABC transporter-like APT56_19075 IPR003593 AAA+ ATPase domain APT56_19075 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_19075 IPR017871 ABC transporter, conserved site APT56_19080 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain APT56_19080 IPR007895 MASE1 APT56_19080 IPR003594 Histidine kinase/HSP90-like ATPase APT56_19080 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APT56_19080 IPR005467 Histidine kinase domain APT56_19085 IPR000792 Transcription regulator LuxR, C-terminal APT56_19085 IPR001789 Signal transduction response regulator, receiver domain APT56_19085 IPR016032 Signal transduction response regulator, C-terminal effector APT56_19085 IPR011006 CheY-like superfamily APT56_19090 IPR005890 Nitrate transport ATP-binding subunit C/D APT56_19090 IPR003439 ABC transporter-like APT56_19090 IPR017871 ABC transporter, conserved site APT56_19090 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_19090 IPR003593 AAA+ ATPase domain APT56_19095 IPR035906 MetI-like superfamily APT56_19095 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_19095 IPR005889 Nitrate transport permease APT56_19100 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_19100 IPR005890 Nitrate transport ATP-binding subunit C/D APT56_19100 IPR003593 AAA+ ATPase domain APT56_19100 IPR003439 ABC transporter-like APT56_19100 IPR017871 ABC transporter, conserved site APT56_19105 IPR003712 Cyanate lyase, C-terminal APT56_19105 IPR008076 Cyanate hydratase APT56_19105 IPR036581 Cyanate lyase, C-terminal domain superfamily APT56_19105 IPR010982 Lambda repressor-like, DNA-binding domain superfamily APT56_19110 IPR023479 Pyridoxine/pyridoxal/pyridoxamine kinase APT56_19110 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase APT56_19110 IPR004625 Pyridoxine kinase APT56_19110 IPR029056 Ribokinase-like APT56_19125 IPR023059 Foldase protein PrsA APT56_19125 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type APT56_19125 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site APT56_19125 IPR027304 Trigger factor/SurA domain superfamily APT56_19150 IPR003400 Biopolymer transport protein ExbD/TolR APT56_19155 IPR014163 Tol-Pal system, TolQ APT56_19155 IPR002898 MotA/TolQ/ExbB proton channel APT56_19215 IPR010981 SinR repressor/SinI anti-repressor, dimerisation domain APT56_19215 IPR010982 Lambda repressor-like, DNA-binding domain superfamily APT56_19215 IPR036281 SinR repressor/SinI anti-repressor, dimerisation domain superfamily APT56_19215 IPR001387 Cro/C1-type helix-turn-helix domain APT56_19220 IPR036409 Class II aldolase/adducin N-terminal domain superfamily APT56_19220 IPR001303 Class II aldolase/adducin N-terminal APT56_19230 IPR005064 Bordetella uptake gene APT56_19230 IPR042100 Bordetella uptake gene, domain 1 APT56_19235 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal APT56_19235 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_19235 IPR003593 AAA+ ATPase domain APT56_19235 IPR017871 ABC transporter, conserved site APT56_19235 IPR003439 ABC transporter-like APT56_19240 IPR008040 Hydantoinaseoxoprolinase, N-terminal APT56_19240 IPR002821 Hydantoinase A/oxoprolinase APT56_19250 IPR039424 Solute-binding protein family 5 APT56_19250 IPR023765 Solute-binding protein family 5, conserved site APT56_19250 IPR000914 Solute-binding protein family 5 domain APT56_19250 IPR030678 Peptide/nickel binding protein, MppA-type APT56_19255 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_19255 IPR035906 MetI-like superfamily APT56_19260 IPR035906 MetI-like superfamily APT56_19260 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_19260 IPR025966 Oligopeptide transport permease C-like, N-terminal domain APT56_19270 IPR003836 Glucokinase APT56_19270 IPR000281 Helix-turn-helix protein RpiR APT56_19270 IPR035472 RpiR-like, SIS domain APT56_19270 IPR001347 Sugar isomerase (SIS) APT56_19270 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_19270 IPR009057 Homeobox-like domain superfamily APT56_19275 IPR013328 6-phosphogluconate dehydrogenase, domain 2 APT56_19275 IPR003710 Ketopantoate reductase ApbA/PanE APT56_19275 IPR013752 Ketopantoate reductase, C-terminal domain APT56_19275 IPR013332 Ketopantoate reductase, N-terminal domain APT56_19275 IPR036291 NAD(P)-binding domain superfamily APT56_19275 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily APT56_19280 IPR002818 DJ-1/PfpI APT56_19280 IPR029062 Class I glutamine amidotransferase-like APT56_19290 IPR000847 Transcription regulator HTH, LysR APT56_19290 IPR036390 Winged helix DNA-binding domain superfamily APT56_19290 IPR005119 LysR, substrate-binding APT56_19290 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_19295 IPR011701 Major facilitator superfamily APT56_19295 IPR020846 Major facilitator superfamily domain APT56_19295 IPR036259 MFS transporter superfamily APT56_19300 IPR029787 Nucleotide cyclase APT56_19300 IPR000160 GGDEF domain APT56_19300 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region APT56_19305 IPR006315 Outer membrane autotransporter barrel APT56_19305 IPR012332 P22 tailspike-like, C-terminal domain superfamily APT56_19305 IPR011050 Pectin lyase fold/virulence factor APT56_19305 IPR005546 Autotransporter beta-domain APT56_19305 IPR036709 Autotransporter beta-domain superfamily APT56_19315 IPR008715 SAM-dependent methyltransferase, NodS-related APT56_19315 IPR020944 Nodulation protein S, NodS APT56_19315 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT56_19330 IPR023588 Transcription regulator HTH, PurR APT56_19330 IPR010982 Lambda repressor-like, DNA-binding domain superfamily APT56_19330 IPR028082 Periplasmic binding protein-like I APT56_19330 IPR000843 LacI-type HTH domain APT56_19335 IPR004682 TRAP transporter solute receptor, DctP family APT56_19335 IPR018389 TRAP transporter solute receptor DctP/TeaA APT56_19335 IPR038404 TRAP transporter solute receptor DctP superfamily APT56_19340 IPR004681 TRAP transporter large membrane protein DctM APT56_19340 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit APT56_19350 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal APT56_19350 IPR033966 RuBisCO APT56_19350 IPR020878 Ribulose bisphosphate carboxylase, large chain, active site APT56_19350 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal APT56_19350 IPR036422 RuBisCO large subunit, N-terminal domain superfamily APT56_19350 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily APT56_19355 IPR042213 Nucleotide-binding, C-terminal domain superfamily APT56_19355 IPR031475 Nucleotide-binding C-terminal domain APT56_19355 IPR010737 Four-carbon acid sugar kinase, N-terminal domain APT56_19355 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily APT56_19360 IPR027051 XdhC Rossmann domain APT56_19360 IPR017695 Selenium-dependent molybdenum hydroxylase system protein, YqeB family APT56_19360 IPR003777 XdhC- CoxI APT56_19365 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding APT56_19365 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily APT56_19365 IPR006311 Twin-arginine translocation pathway, signal sequence APT56_19365 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related APT56_19365 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead APT56_19365 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily APT56_19370 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site APT56_19370 IPR036010 2Fe-2S ferredoxin-like superfamily APT56_19370 IPR036884 [2Fe-2S]-binding domain superfamily APT56_19370 IPR002888 [2Fe-2S]-binding APT56_19370 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain APT56_19375 IPR013149 Alcohol dehydrogenase, C-terminal APT56_19375 IPR013154 Alcohol dehydrogenase, N-terminal APT56_19375 IPR036291 NAD(P)-binding domain superfamily APT56_19375 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 APT56_19375 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site APT56_19375 IPR011032 GroES-like superfamily APT56_19375 IPR020843 Polyketide synthase, enoylreductase domain APT56_19380 IPR009057 Homeobox-like domain superfamily APT56_19380 IPR009594 Transcription regulator HTH, AraC, N-terminal APT56_19380 IPR018060 DNA binding HTH domain, AraC-type APT56_19395 IPR004840 Amino acid permease, conserved site APT56_19395 IPR004841 Amino acid permease/ SLC12A domain APT56_19395 IPR011265 GABA permease APT56_19400 IPR033651 LigD polymerase domain, PaeLigD-type APT56_19400 IPR014143 DNA ligase D APT56_19400 IPR012340 Nucleic acid-binding, OB-fold APT56_19400 IPR014145 DNA ligase D, polymerase domain APT56_19400 IPR014144 DNA ligase D, 3'-phosphoesterase domain APT56_19400 IPR014146 DNA ligase D, ligase domain APT56_19400 IPR012310 DNA ligase, ATP-dependent, central APT56_19400 IPR012309 DNA ligase, ATP-dependent, C-terminal APT56_19405 IPR006164 Ku70/Ku80 beta-barrel domain APT56_19405 IPR009187 Non-homologous end joining protein Ku, prokaryotic type APT56_19405 IPR016194 SPOC-like, C-terminal domain superfamily APT56_19410 IPR008135 Competence-induced protein CinA APT56_19410 IPR001453 MoaB/Mog domain APT56_19410 IPR036653 CinA-like, C-terminal APT56_19410 IPR008136 CinA, C-terminal APT56_19410 IPR041424 CinA, KH domain APT56_19410 IPR036425 MoaB/Mog-like domain superfamily APT56_19415 IPR001789 Signal transduction response regulator, receiver domain APT56_19415 IPR003593 AAA+ ATPase domain APT56_19415 IPR002078 RNA polymerase sigma factor 54 interaction domain APT56_19415 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 APT56_19415 IPR002197 DNA binding HTH domain, Fis-type APT56_19415 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_19415 IPR009057 Homeobox-like domain superfamily APT56_19415 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 APT56_19415 IPR025944 Sigma-54 interaction domain, conserved site APT56_19415 IPR011006 CheY-like superfamily APT56_19420 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APT56_19420 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily APT56_19420 IPR035965 PAS domain superfamily APT56_19420 IPR005467 Histidine kinase domain APT56_19420 IPR003660 HAMP domain APT56_19420 IPR004358 Signal transduction histidine kinase-related protein, C-terminal APT56_19420 IPR013767 PAS fold APT56_19420 IPR003594 Histidine kinase/HSP90-like ATPase APT56_19420 IPR000700 PAS-associated, C-terminal APT56_19420 IPR000014 PAS domain APT56_19420 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain APT56_19430 IPR002823 Protein of unknown function DUF112, transmembrane APT56_19445 IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase APT56_19445 IPR036264 Bacterial exopeptidase dimerisation domain APT56_19445 IPR002933 Peptidase M20 APT56_19445 IPR011650 Peptidase M20, dimerisation domain APT56_19455 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APT56_19455 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APT56_19455 IPR015424 Pyridoxal phosphate-dependent transferase APT56_19455 IPR005814 Aminotransferase class-III APT56_19460 IPR004839 Aminotransferase, class I/classII APT56_19460 IPR015424 Pyridoxal phosphate-dependent transferase APT56_19460 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APT56_19460 IPR000524 Transcription regulator HTH, GntR APT56_19460 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_19460 IPR036390 Winged helix DNA-binding domain superfamily APT56_19465 IPR005829 Sugar transporter, conserved site APT56_19465 IPR004736 MFS transporter, metabolite:H symporter APT56_19465 IPR036259 MFS transporter superfamily APT56_19465 IPR005828 Major facilitator, sugar transporter-like APT56_19465 IPR020846 Major facilitator superfamily domain APT56_19465 IPR011701 Major facilitator superfamily APT56_19470 IPR039425 RNA polymerase sigma-70 like APT56_19470 IPR014284 RNA polymerase sigma-70 like domain APT56_19470 IPR013324 RNA polymerase sigma factor, region 3/4-like APT56_19470 IPR013325 RNA polymerase sigma factor, region 2 APT56_19470 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 APT56_19470 IPR007627 RNA polymerase sigma-70 region 2 APT56_19470 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site APT56_19470 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_19480 IPR000531 TonB-dependent receptor-like, beta-barrel APT56_19480 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily APT56_19480 IPR039423 TonB-dependent receptor-like APT56_19480 IPR012910 TonB-dependent receptor, plug domain APT56_19480 IPR010916 TonB box, conserved site APT56_19480 IPR037066 TonB-dependent receptor, plug domain superfamily APT56_19480 IPR010105 TonB-dependent siderophore receptor APT56_19485 IPR000531 TonB-dependent receptor-like, beta-barrel APT56_19485 IPR010101 TonB-dependent vitamin B12 transporter BtuB APT56_19485 IPR039426 Vitamin B12 transporter BtuB-like APT56_19485 IPR037066 TonB-dependent receptor, plug domain superfamily APT56_19485 IPR012910 TonB-dependent receptor, plug domain APT56_19485 IPR010916 TonB box, conserved site APT56_19485 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily APT56_19485 IPR010917 TonB-dependent receptor, conserved site APT56_19490 IPR000531 TonB-dependent receptor-like, beta-barrel APT56_19490 IPR039426 Vitamin B12 transporter BtuB-like APT56_19490 IPR037066 TonB-dependent receptor, plug domain superfamily APT56_19490 IPR010916 TonB box, conserved site APT56_19490 IPR010101 TonB-dependent vitamin B12 transporter BtuB APT56_19490 IPR012910 TonB-dependent receptor, plug domain APT56_19490 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily APT56_19520 IPR014710 RmlC-like jelly roll fold APT56_19520 IPR012318 Crp-type HTH domain APT56_19520 IPR018490 Cyclic nucleotide-binding-like APT56_19520 IPR000595 Cyclic nucleotide-binding domain APT56_19520 IPR036390 Winged helix DNA-binding domain superfamily APT56_19520 IPR018335 Transcription regulator HTH, Crp-type, conserved site APT56_19520 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_19530 IPR016032 Signal transduction response regulator, C-terminal effector APT56_19530 IPR000792 Transcription regulator LuxR, C-terminal APT56_19530 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_19540 IPR029058 Alpha/Beta hydrolase fold APT56_19540 IPR000073 Alpha/beta hydrolase fold-1 APT56_19540 IPR000639 Epoxide hydrolase-like APT56_19555 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_19555 IPR029016 GAF-like domain superfamily APT56_19555 IPR011991 ArsR-like helix-turn-helix domain APT56_19555 IPR036390 Winged helix DNA-binding domain superfamily APT56_19555 IPR005471 Transcription regulator IclR, N-terminal APT56_19555 IPR014757 Transcription regulator IclR, C-terminal APT56_19560 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily APT56_19560 IPR011234 Fumarylacetoacetase-like, C-terminal APT56_19565 IPR036291 NAD(P)-binding domain superfamily APT56_19565 IPR020904 Short-chain dehydrogenase/reductase, conserved site APT56_19565 IPR002347 Short-chain dehydrogenase/reductase SDR APT56_19575 IPR007392 D-galactarate/Altronate dehydratase, C-terminal APT56_19575 IPR013974 SAF domain APT56_19580 IPR035906 MetI-like superfamily APT56_19580 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_19580 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain APT56_19585 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain APT56_19585 IPR035906 MetI-like superfamily APT56_19585 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_19590 IPR003439 ABC transporter-like APT56_19590 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type APT56_19590 IPR003593 AAA+ ATPase domain APT56_19590 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_19590 IPR017871 ABC transporter, conserved site APT56_19600 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal APT56_19600 IPR029017 Enolase-like, N-terminal APT56_19600 IPR029065 Enolase C-terminal domain-like APT56_19600 IPR034382 3,6-anhydro-alpha-L-galactonate cycloisomerase APT56_19600 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain APT56_19600 IPR036849 Enolase-like, C-terminal domain superfamily APT56_19605 IPR036188 FAD/NAD(P)-binding domain superfamily APT56_19605 IPR027424 Glucose Oxidase, domain 2 APT56_19605 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal APT56_19605 IPR012132 Glucose-methanol-choline oxidoreductase APT56_19605 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal APT56_19610 IPR036291 NAD(P)-binding domain superfamily APT56_19610 IPR011342 Shikimate dehydrogenase APT56_19610 IPR022893 Shikimate dehydrogenase family APT56_19610 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal APT56_19610 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase APT56_19610 IPR041121 SDH, C-terminal APT56_19615 IPR005475 Transketolase-like, pyrimidine-binding domain APT56_19615 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II APT56_19615 IPR029061 Thiamin diphosphate-binding fold APT56_19615 IPR033248 Transketolase, C-terminal domain APT56_19620 IPR029061 Thiamin diphosphate-binding fold APT56_19620 IPR005474 Transketolase, N-terminal APT56_19625 IPR000524 Transcription regulator HTH, GntR APT56_19625 IPR011711 GntR, C-terminal APT56_19625 IPR036390 Winged helix DNA-binding domain superfamily APT56_19625 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_19625 IPR008920 Transcription regulator FadR/GntR, C-terminal APT56_19630 IPR016205 Glycerol dehydrogenase APT56_19630 IPR018211 Alcohol dehydrogenase, iron-type, conserved site APT56_19630 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA APT56_19635 IPR008567 3-keto-5-aminohexanoate cleavage enzyme APT56_19635 IPR013785 Aldolase-type TIM barrel APT56_19640 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding APT56_19640 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal APT56_19640 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily APT56_19640 IPR013328 6-phosphogluconate dehydrogenase, domain 2 APT56_19640 IPR026578 L-carnitine dehydrogenase APT56_19640 IPR022694 3-hydroxyacyl-CoA dehydrogenase APT56_19640 IPR036291 NAD(P)-binding domain superfamily APT56_19645 IPR020904 Short-chain dehydrogenase/reductase, conserved site APT56_19645 IPR002347 Short-chain dehydrogenase/reductase SDR APT56_19645 IPR036291 NAD(P)-binding domain superfamily APT56_19650 IPR000709 Leu/Ile/Val-binding protein APT56_19650 IPR028082 Periplasmic binding protein-like I APT56_19650 IPR028081 Leucine-binding protein domain APT56_19655 IPR001851 ABC transporter, permease APT56_19660 IPR003439 ABC transporter-like APT56_19660 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_19660 IPR003593 AAA+ ATPase domain APT56_19660 IPR017871 ABC transporter, conserved site APT56_19660 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal APT56_19665 IPR017871 ABC transporter, conserved site APT56_19665 IPR003439 ABC transporter-like APT56_19665 IPR003593 AAA+ ATPase domain APT56_19665 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_19665 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein APT56_19670 IPR014031 Beta-ketoacyl synthase, C-terminal APT56_19670 IPR018201 Beta-ketoacyl synthase, active site APT56_19670 IPR006162 Phosphopantetheine attachment site APT56_19670 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase APT56_19670 IPR014043 Acyl transferase APT56_19670 IPR036736 ACP-like superfamily APT56_19670 IPR001227 Acyl transferase domain superfamily APT56_19670 IPR011032 GroES-like superfamily APT56_19670 IPR013154 Alcohol dehydrogenase, N-terminal APT56_19670 IPR020843 Polyketide synthase, enoylreductase domain APT56_19670 IPR016039 Thiolase-like APT56_19670 IPR014030 Beta-ketoacyl synthase, N-terminal APT56_19670 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding APT56_19670 IPR036291 NAD(P)-binding domain superfamily APT56_19670 IPR032821 Ketoacyl-synthetase, C-terminal extension APT56_19670 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain APT56_19670 IPR020807 Polyketide synthase, dehydratase domain APT56_19670 IPR042104 Polyketide synthase, dehydratase domain superfamily APT56_19670 IPR013968 Polyketide synthase, ketoreductase domain APT56_19670 IPR020806 Polyketide synthase, phosphopantetheine-binding domain APT56_19670 IPR036299 Polyketide synthase, docking domain superfmaily APT56_19670 IPR009081 Phosphopantetheine binding ACP domain APT56_19675 IPR036291 NAD(P)-binding domain superfamily APT56_19675 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase APT56_19675 IPR020904 Short-chain dehydrogenase/reductase, conserved site APT56_19675 IPR002347 Short-chain dehydrogenase/reductase SDR APT56_19680 IPR010105 TonB-dependent siderophore receptor APT56_19680 IPR012910 TonB-dependent receptor, plug domain APT56_19680 IPR010917 TonB-dependent receptor, conserved site APT56_19680 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily APT56_19680 IPR030149 TonB-dependent siderophore receptor FcuA/FatA APT56_19680 IPR010916 TonB box, conserved site APT56_19680 IPR000531 TonB-dependent receptor-like, beta-barrel APT56_19680 IPR039423 TonB-dependent receptor-like APT56_19680 IPR037066 TonB-dependent receptor, plug domain superfamily APT56_19690 IPR036390 Winged helix DNA-binding domain superfamily APT56_19690 IPR005119 LysR, substrate-binding APT56_19690 IPR000847 Transcription regulator HTH, LysR APT56_19690 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_19695 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 APT56_19695 IPR036008 Aconitase, iron-sulfur domain APT56_19695 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel APT56_19695 IPR006249 Aconitase/Iron-responsive element-binding protein 2 APT56_19695 IPR018136 Aconitase family, 4Fe-4S cluster binding site APT56_19695 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain APT56_19695 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain APT56_19700 IPR036737 OmpA-like domain superfamily APT56_19700 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel APT56_19700 IPR006664 Outer membrane protein, bacterial APT56_19700 IPR002368 Outer membrane protein, OmpA APT56_19700 IPR006690 Outer membrane protein, OmpA-like, conserved site APT56_19700 IPR000498 Outer membrane protein OmpA-like, transmembrane domain APT56_19700 IPR006665 OmpA-like domain APT56_19705 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type APT56_19705 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B APT56_19720 IPR001059 Translation elongation factor P/YeiP, central APT56_19720 IPR013185 Translation elongation factor, KOW-like APT56_19720 IPR020599 Translation elongation factor P/YeiP APT56_19720 IPR011768 Translation elongation factor P APT56_19720 IPR014722 Ribosomal protein L2, domain 2 APT56_19720 IPR012340 Nucleic acid-binding, OB-fold APT56_19720 IPR015365 Elongation factor P, C-terminal APT56_19720 IPR008991 Translation protein SH3-like domain superfamily APT56_19720 IPR013852 Translation elongation factor P/YeiP, conserved site APT56_19735 IPR003593 AAA+ ATPase domain APT56_19735 IPR011006 CheY-like superfamily APT56_19735 IPR009057 Homeobox-like domain superfamily APT56_19735 IPR002197 DNA binding HTH domain, Fis-type APT56_19735 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_19735 IPR025944 Sigma-54 interaction domain, conserved site APT56_19735 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 APT56_19735 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 APT56_19735 IPR002078 RNA polymerase sigma factor 54 interaction domain APT56_19735 IPR001789 Signal transduction response regulator, receiver domain APT56_19765 IPR022399 Helicase/secretion neighbourhood ATPase APT56_19765 IPR001482 Type II/IV secretion system protein APT56_19765 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_19775 IPR004846 Type II/III secretion system APT56_19775 IPR032789 Pilus formation protein, N-terminal APT56_19775 IPR001775 GspD/PilQ family APT56_19775 IPR014004 Transport-associated and nodulation domain, bacteria APT56_19775 IPR007055 BON domain APT56_19805 IPR000160 GGDEF domain APT56_19805 IPR029787 Nucleotide cyclase APT56_19805 IPR005330 MHYT domain APT56_19805 IPR035919 EAL domain superfamily APT56_19805 IPR001633 EAL domain APT56_19810 IPR034746 POTRA domain APT56_19810 IPR005565 Haemolysin activator HlyB, C-terminal APT56_19810 IPR013686 Polypeptide-transport-associated, ShlB-type APT56_19820 IPR036390 Winged helix DNA-binding domain superfamily APT56_19820 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_19820 IPR000835 MarR-type HTH domain APT56_19820 IPR011991 ArsR-like helix-turn-helix domain APT56_19825 IPR003593 AAA+ ATPase domain APT56_19825 IPR003439 ABC transporter-like APT56_19825 IPR017871 ABC transporter, conserved site APT56_19825 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_19825 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal APT56_19830 IPR025966 Oligopeptide transport permease C-like, N-terminal domain APT56_19830 IPR035906 MetI-like superfamily APT56_19830 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_19835 IPR035906 MetI-like superfamily APT56_19835 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_19850 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB APT56_19850 IPR004488 Magnesium/cobalt transport protein CorA APT56_19855 IPR005751 ATP-dependent DNA helicase PcrA APT56_19855 IPR000212 DNA helicase, UvrD/REP type APT56_19855 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_19855 IPR014016 UvrD-like helicase, ATP-binding domain APT56_19855 IPR013986 DExx box DNA helicase domain superfamily APT56_19855 IPR034739 UvrD/AddA helicase, N-terminal APT56_19855 IPR014017 UvrD-like DNA helicase, C-terminal APT56_19865 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_19865 IPR015424 Pyridoxal phosphate-dependent transferase APT56_19865 IPR000524 Transcription regulator HTH, GntR APT56_19865 IPR036390 Winged helix DNA-binding domain superfamily APT56_19865 IPR004839 Aminotransferase, class I/classII APT56_19865 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APT56_19870 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APT56_19870 IPR005814 Aminotransferase class-III APT56_19870 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APT56_19870 IPR015424 Pyridoxal phosphate-dependent transferase APT56_19870 IPR004632 4-aminobutyrate aminotransferase, bacterial APT56_19875 IPR016161 Aldehyde/histidinol dehydrogenase APT56_19875 IPR015590 Aldehyde dehydrogenase domain APT56_19875 IPR016163 Aldehyde dehydrogenase, C-terminal APT56_19875 IPR016162 Aldehyde dehydrogenase, N-terminal APT56_19875 IPR029510 Aldehyde dehydrogenase, glutamic acid active site APT56_19875 IPR016160 Aldehyde dehydrogenase, cysteine active site APT56_19875 IPR010102 Succinate semialdehyde dehydrogenase APT56_19880 IPR020550 Inositol monophosphatase, conserved site APT56_19880 IPR000760 Inositol monophosphatase-like APT56_19880 IPR020583 Inositol monophosphatase, metal-binding site APT56_19880 IPR033942 Inositol monophosphatase APT56_19880 IPR022337 Inositol monophosphatase, SuhB APT56_19885 IPR026590 Sirtuin family, catalytic core domain APT56_19885 IPR026587 Sirtuin, class II APT56_19885 IPR026591 Sirtuin, catalytic core small domain superfamily APT56_19885 IPR003000 Sirtuin family APT56_19885 IPR029035 DHS-like NAD/FAD-binding domain superfamily APT56_19890 IPR001451 Hexapeptide repeat APT56_19890 IPR042122 Serine acetyltransferase, N-terminal domain superfamily APT56_19890 IPR011004 Trimeric LpxA-like superfamily APT56_19895 IPR036291 NAD(P)-binding domain superfamily APT56_19895 IPR016040 NAD(P)-binding domain APT56_19895 IPR005886 UDP-glucose 4-epimerase APT56_19900 IPR035482 Phosphoglucose isomerase, SIS domain 2 APT56_19900 IPR035476 Phosphoglucose isomerase, SIS domain 1 APT56_19900 IPR001672 Phosphoglucose isomerase (PGI) APT56_19900 IPR023096 Phosphoglucose isomerase, C-terminal APT56_19900 IPR018189 Phosphoglucose isomerase, conserved site APT56_19905 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I APT56_19905 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III APT56_19905 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II APT56_19905 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III APT56_19905 IPR005843 Alpha-D-phosphohexomutase, C-terminal APT56_19905 IPR016066 Alpha-D-phosphohexomutase, conserved site APT56_19905 IPR005841 Alpha-D-phosphohexomutase superfamily APT56_19905 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily APT56_19910 IPR005702 Exopolysaccharide synthesis protein APT56_19910 IPR005700 Exopolysaccharide biosynthesis protein ExoP-like APT56_19910 IPR032807 Tyrosine kinase, G-rich domain APT56_19910 IPR025669 AAA domain APT56_19910 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_19910 IPR003856 Polysaccharide chain length determinant N-terminal domain APT56_19915 IPR019554 Soluble ligand binding domain APT56_19915 IPR003715 Polysaccharide export protein APT56_19920 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ APT56_19920 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase APT56_19920 IPR003362 Bacterial sugar transferase APT56_19925 IPR028613 GDP-mannose mannosyl hydrolase, Enterobacteria APT56_19925 IPR015797 NUDIX hydrolase-like domain superfamily APT56_19925 IPR020084 NUDIX hydrolase, conserved site APT56_19925 IPR000086 NUDIX hydrolase domain APT56_19925 IPR033715 GDP-mannose mannosyl hydrolase APT56_19930 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase APT56_19930 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal APT56_19930 IPR005835 Nucleotidyl transferase domain APT56_19930 IPR014710 RmlC-like jelly roll fold APT56_19930 IPR011051 RmlC-like cupin domain superfamily APT56_19930 IPR029044 Nucleotide-diphospho-sugar transferases APT56_19940 IPR036291 NAD(P)-binding domain superfamily APT56_19940 IPR016040 NAD(P)-binding domain APT56_19940 IPR006368 GDP-mannose 4,6-dehydratase APT56_19945 IPR036291 NAD(P)-binding domain superfamily APT56_19945 IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase APT56_19945 IPR001509 NAD-dependent epimerase/dehydratase APT56_19955 IPR001173 Glycosyltransferase 2-like APT56_19955 IPR029044 Nucleotide-diphospho-sugar transferases APT56_19965 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain APT56_19965 IPR001296 Glycosyl transferase, family 1 APT56_19965 IPR023884 Colanic acid biosynthesis, glycosyl transferase, WcaL APT56_19970 IPR001173 Glycosyltransferase 2-like APT56_19970 IPR029044 Nucleotide-diphospho-sugar transferases APT56_19975 IPR011004 Trimeric LpxA-like superfamily APT56_19975 IPR024005 Colanic acid biosynthesis, acetyltransferase, WcaF APT56_19975 IPR001451 Hexapeptide repeat APT56_19975 IPR018357 Hexapeptide transferase, conserved site APT56_19980 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain APT56_19980 IPR001296 Glycosyl transferase, family 1 APT56_19980 IPR023910 Colanic acid biosynthesis, glycosyl transferase, WcaI APT56_19985 IPR016032 Signal transduction response regulator, C-terminal effector APT56_19985 IPR011006 CheY-like superfamily APT56_19985 IPR001789 Signal transduction response regulator, receiver domain APT56_19985 IPR000792 Transcription regulator LuxR, C-terminal APT56_19990 IPR016032 Signal transduction response regulator, C-terminal effector APT56_19990 IPR011006 CheY-like superfamily APT56_19990 IPR000792 Transcription regulator LuxR, C-terminal APT56_19990 IPR001789 Signal transduction response regulator, receiver domain APT56_19990 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_20000 IPR001647 DNA-binding HTH domain, TetR-type APT56_20000 IPR013572 Transcription regulator MAATS, C-terminal APT56_20000 IPR023772 DNA-binding HTH domain, TetR-type, conserved site APT56_20000 IPR009057 Homeobox-like domain superfamily APT56_20000 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily APT56_20005 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal APT56_20005 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal APT56_20005 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily APT56_20005 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily APT56_20005 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal APT56_20005 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type APT56_20010 IPR020615 Thiolase, acyl-enzyme intermediate active site APT56_20010 IPR016039 Thiolase-like APT56_20010 IPR002155 Thiolase APT56_20010 IPR020613 Thiolase, conserved site APT56_20010 IPR020616 Thiolase, N-terminal APT56_20010 IPR020610 Thiolase, active site APT56_20010 IPR020617 Thiolase, C-terminal APT56_20015 IPR029045 ClpP/crotonase-like domain superfamily APT56_20015 IPR001753 Enoyl-CoA hydratase/isomerase APT56_20015 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site APT56_20015 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding APT56_20015 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal APT56_20015 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily APT56_20015 IPR012802 Fatty oxidation complex, alpha subunit FadJ APT56_20015 IPR036291 NAD(P)-binding domain superfamily APT56_20025 IPR036291 NAD(P)-binding domain superfamily APT56_20025 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding APT56_20025 IPR001753 Enoyl-CoA hydratase/isomerase APT56_20025 IPR029045 ClpP/crotonase-like domain superfamily APT56_20025 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal APT56_20025 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily APT56_20025 IPR013328 6-phosphogluconate dehydrogenase, domain 2 APT56_20030 IPR020617 Thiolase, C-terminal APT56_20030 IPR020616 Thiolase, N-terminal APT56_20030 IPR016039 Thiolase-like APT56_20030 IPR020610 Thiolase, active site APT56_20030 IPR020615 Thiolase, acyl-enzyme intermediate active site APT56_20030 IPR002155 Thiolase APT56_20030 IPR020613 Thiolase, conserved site APT56_20045 IPR020845 AMP-binding, conserved site APT56_20045 IPR000873 AMP-dependent synthetase/ligase APT56_20045 IPR025110 AMP-binding enzyme, C-terminal domain APT56_20045 IPR042099 AMP-dependent synthetase-like superfamily APT56_20050 IPR017850 Alkaline-phosphatase-like, core domain superfamily APT56_20050 IPR032506 Domain of unknown function DUF4976 APT56_20050 IPR000917 Sulfatase, N-terminal APT56_20055 IPR005064 Bordetella uptake gene APT56_20055 IPR042100 Bordetella uptake gene, domain 1 APT56_20065 IPR003593 AAA+ ATPase domain APT56_20065 IPR039421 Type I protein exporter APT56_20065 IPR003439 ABC transporter-like APT56_20065 IPR036640 ABC transporter type 1, transmembrane domain superfamily APT56_20065 IPR011527 ABC transporter type 1, transmembrane domain APT56_20065 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_20065 IPR017871 ABC transporter, conserved site APT56_20070 IPR004684 2-keto-3-deoxygluconate permease APT56_20075 IPR031475 Nucleotide-binding C-terminal domain APT56_20075 IPR010737 Four-carbon acid sugar kinase, N-terminal domain APT56_20075 IPR042213 Nucleotide-binding, C-terminal domain superfamily APT56_20075 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily APT56_20080 IPR005255 PdxA family APT56_20090 IPR037171 NagB/RpiA transferase-like APT56_20090 IPR004165 Coenzyme A transferase family I APT56_20095 IPR037171 NagB/RpiA transferase-like APT56_20095 IPR004165 Coenzyme A transferase family I APT56_20105 IPR003673 CoA-transferase family III APT56_20105 IPR023606 CoA-transferase family III domain superfamily APT56_20110 IPR029016 GAF-like domain superfamily APT56_20110 IPR036390 Winged helix DNA-binding domain superfamily APT56_20110 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_20110 IPR005471 Transcription regulator IclR, N-terminal APT56_20110 IPR011991 ArsR-like helix-turn-helix domain APT56_20110 IPR014757 Transcription regulator IclR, C-terminal APT56_20115 IPR010300 Cysteine dioxygenase type I APT56_20115 IPR011051 RmlC-like cupin domain superfamily APT56_20115 IPR014710 RmlC-like jelly roll fold APT56_20120 IPR029035 DHS-like NAD/FAD-binding domain superfamily APT56_20120 IPR003000 Sirtuin family APT56_20120 IPR026591 Sirtuin, catalytic core small domain superfamily APT56_20120 IPR027546 Sirtuin, class III APT56_20120 IPR026590 Sirtuin family, catalytic core domain APT56_20145 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_20145 IPR005119 LysR, substrate-binding APT56_20145 IPR036390 Winged helix DNA-binding domain superfamily APT56_20145 IPR000847 Transcription regulator HTH, LysR APT56_20155 IPR016181 Acyl-CoA N-acyltransferase APT56_20155 IPR000182 GNAT domain APT56_20185 IPR041490 HTH-type transcriptional repressor KstR2, C-terminal APT56_20185 IPR001647 DNA-binding HTH domain, TetR-type APT56_20185 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily APT56_20185 IPR009057 Homeobox-like domain superfamily APT56_20190 IPR006311 Twin-arginine translocation pathway, signal sequence APT56_20190 IPR007312 Phosphoesterase APT56_20190 IPR017850 Alkaline-phosphatase-like, core domain superfamily APT56_20195 IPR001763 Rhodanese-like domain APT56_20195 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_20195 IPR017582 tRNA 2-selenouridine/geranyl-2-thiouridine synthase APT56_20195 IPR036873 Rhodanese-like domain superfamily APT56_20200 IPR005546 Autotransporter beta-domain APT56_20200 IPR012332 P22 tailspike-like, C-terminal domain superfamily APT56_20200 IPR006315 Outer membrane autotransporter barrel APT56_20200 IPR011050 Pectin lyase fold/virulence factor APT56_20200 IPR036709 Autotransporter beta-domain superfamily APT56_20205 IPR004358 Signal transduction histidine kinase-related protein, C-terminal APT56_20205 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal APT56_20205 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily APT56_20205 IPR011006 CheY-like superfamily APT56_20205 IPR030856 Sensor histidine kinase RcsC APT56_20205 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APT56_20205 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain APT56_20205 IPR001789 Signal transduction response regulator, receiver domain APT56_20205 IPR003594 Histidine kinase/HSP90-like ATPase APT56_20205 IPR038388 RcsC, C-terminal domain superfamily APT56_20205 IPR005467 Histidine kinase domain APT56_20210 IPR000160 GGDEF domain APT56_20210 IPR035919 EAL domain superfamily APT56_20210 IPR001633 EAL domain APT56_20210 IPR029787 Nucleotide cyclase APT56_20210 IPR005330 MHYT domain APT56_20215 IPR030856 Sensor histidine kinase RcsC APT56_20215 IPR011006 CheY-like superfamily APT56_20215 IPR003594 Histidine kinase/HSP90-like ATPase APT56_20215 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain APT56_20215 IPR005467 Histidine kinase domain APT56_20215 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily APT56_20215 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APT56_20215 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal APT56_20215 IPR038388 RcsC, C-terminal domain superfamily APT56_20215 IPR001789 Signal transduction response regulator, receiver domain APT56_20215 IPR004358 Signal transduction histidine kinase-related protein, C-terminal APT56_20235 IPR036393 Acetylglutamate kinase-like superfamily APT56_20235 IPR027795 CASTOR, ACT domain APT56_20235 IPR002912 ACT domain APT56_20235 IPR018042 Aspartate kinase, conserved site APT56_20235 IPR041740 Aspartokinase catalytic domain APT56_20235 IPR001048 Aspartate/glutamate/uridylate kinase APT56_20235 IPR005260 Aspartate kinase, monofunctional class APT56_20235 IPR001341 Aspartate kinase APT56_20240 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal APT56_20240 IPR012094 tRNA(Ile)-lysidine synthase APT56_20240 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal APT56_20240 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT56_20240 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain APT56_20245 IPR001095 Acetyl-CoA carboxylase, alpha subunit APT56_20245 IPR029045 ClpP/crotonase-like domain superfamily APT56_20245 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal APT56_20255 IPR015803 Cysteine-tRNA ligase APT56_20255 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR APT56_20255 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase APT56_20255 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT56_20255 IPR032678 tRNA synthetases class I, catalytic domain APT56_20255 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding APT56_20265 IPR029000 Cyclophilin-like domain superfamily APT56_20265 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain APT56_20265 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase APT56_20265 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site APT56_20270 IPR010138 UDP-2,3-diacylglucosamine hydrolase APT56_20270 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type APT56_20275 IPR003824 Undecaprenyl-diphosphatase UppP APT56_20280 IPR005170 Transporter-associated domain APT56_20280 IPR005496 Integral membrane protein TerC APT56_20280 IPR016169 FAD-binding, type PCMH, subdomain 2 APT56_20280 IPR036318 FAD-binding, type PCMH-like superfamily APT56_20280 IPR000644 CBS domain APT56_20285 IPR020550 Inositol monophosphatase, conserved site APT56_20285 IPR020583 Inositol monophosphatase, metal-binding site APT56_20285 IPR000760 Inositol monophosphatase-like APT56_20285 IPR033942 Inositol monophosphatase APT56_20285 IPR022337 Inositol monophosphatase, SuhB APT56_20290 IPR001537 tRNA/rRNA methyltransferase, SpoU type APT56_20290 IPR029028 Alpha/beta knot methyltransferases APT56_20290 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APT56_20290 IPR004384 RNA methyltransferase TrmJ/LasT APT56_20295 IPR005064 Bordetella uptake gene APT56_20295 IPR042100 Bordetella uptake gene, domain 1 APT56_20305 IPR011066 Mechanosensitive ion channel MscS, C-terminal APT56_20305 IPR006685 Mechanosensitive ion channel MscS APT56_20305 IPR010920 LSM domain superfamily APT56_20305 IPR006686 Mechanosensitive ion channel MscS, conserved site APT56_20305 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 APT56_20305 IPR008910 Conserved TM helix APT56_20305 IPR023408 Mechanosensitive ion channel MscS domain superfamily APT56_20330 IPR020846 Major facilitator superfamily domain APT56_20330 IPR005829 Sugar transporter, conserved site APT56_20330 IPR036259 MFS transporter superfamily APT56_20330 IPR005828 Major facilitator, sugar transporter-like APT56_20345 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APT56_20345 IPR015168 SsuA/THI5-like APT56_20345 IPR010067 Aliphatic sulfonates-binding protein APT56_20350 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_20350 IPR035906 MetI-like superfamily APT56_20350 IPR005889 Nitrate transport permease APT56_20355 IPR015859 ABC transporter, taurine import, TauD APT56_20355 IPR017871 ABC transporter, conserved site APT56_20355 IPR003439 ABC transporter-like APT56_20355 IPR003593 AAA+ ATPase domain APT56_20355 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_20365 IPR014087 1-carboxybiuret hydrolase, AtzE subunit APT56_20365 IPR036928 Amidase signature (AS) superfamily APT56_20365 IPR000120 Amidase APT56_20365 IPR023631 Amidase signature domain APT56_20370 IPR036390 Winged helix DNA-binding domain superfamily APT56_20370 IPR008920 Transcription regulator FadR/GntR, C-terminal APT56_20370 IPR011711 GntR, C-terminal APT56_20370 IPR000524 Transcription regulator HTH, GntR APT56_20370 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_20385 IPR005025 NADPH-dependent FMN reductase-like APT56_20385 IPR029039 Flavoprotein-like superfamily APT56_20390 IPR036694 Dodecin-like superfamily APT56_20390 IPR025543 Dodecin-like APT56_20390 IPR009923 Dodecin APT56_20400 IPR000847 Transcription regulator HTH, LysR APT56_20400 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_20400 IPR036390 Winged helix DNA-binding domain superfamily APT56_20400 IPR005119 LysR, substrate-binding APT56_20405 IPR036291 NAD(P)-binding domain superfamily APT56_20405 IPR002347 Short-chain dehydrogenase/reductase SDR APT56_20410 IPR013154 Alcohol dehydrogenase, N-terminal APT56_20410 IPR013149 Alcohol dehydrogenase, C-terminal APT56_20410 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site APT56_20410 IPR036291 NAD(P)-binding domain superfamily APT56_20410 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 APT56_20410 IPR011032 GroES-like superfamily APT56_20410 IPR020843 Polyketide synthase, enoylreductase domain APT56_20440 IPR005119 LysR, substrate-binding APT56_20440 IPR000847 Transcription regulator HTH, LysR APT56_20440 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_20440 IPR036390 Winged helix DNA-binding domain superfamily APT56_20460 IPR036187 DNA mismatch repair protein MutS, core domain superfamily APT56_20460 IPR016151 DNA mismatch repair protein MutS, N-terminal APT56_20460 IPR007696 DNA mismatch repair protein MutS, core APT56_20460 IPR005748 DNA mismatch repair protein MutS APT56_20460 IPR000432 DNA mismatch repair protein MutS, C-terminal APT56_20460 IPR007861 DNA mismatch repair protein MutS, clamp APT56_20460 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_20460 IPR036678 MutS, connector domain superfamily APT56_20460 IPR007860 DNA mismatch repair protein MutS, connector domain APT56_20460 IPR007695 DNA mismatch repair protein MutS-like, N-terminal APT56_20460 IPR017261 DNA mismatch repair protein MutS/MSH APT56_20465 IPR003347 JmjC domain APT56_20465 IPR039994 JmjC domain-containing APT56_20475 IPR010653 NlpB/DapX lipoprotein APT56_20475 IPR014524 Outer membrane protein assembly factor BamC APT56_20475 IPR042268 Outer membrane protein assembly factor BamC, C-terminal APT56_20480 IPR020625 Schiff base-forming aldolase, active site APT56_20480 IPR020624 Schiff base-forming aldolase, conserved site APT56_20480 IPR002220 DapA-like APT56_20480 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA APT56_20480 IPR013785 Aldolase-type TIM barrel APT56_20485 IPR008915 Peptidase M50 APT56_20490 IPR006070 YrdC-like domain APT56_20490 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily APT56_20495 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative APT56_20550 IPR012340 Nucleic acid-binding, OB-fold APT56_20550 IPR008231 Probable chaperone CsaA APT56_20550 IPR002547 tRNA-binding domain APT56_20555 IPR003810 Putative manganese efflux pump APT56_20555 IPR022929 Putative manganese efflux pump MntP APT56_20560 IPR002500 Phosphoadenosine phosphosulphate reductase APT56_20560 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT56_20560 IPR021845 Protein of unknown function DUF3440 APT56_20565 IPR003115 ParB/Sulfiredoxin APT56_20565 IPR036086 ParB/Sulfiredoxin superfamily APT56_20570 IPR013727 Two-component sensor kinase, N-terminal APT56_20570 IPR005467 Histidine kinase domain APT56_20570 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain APT56_20570 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily APT56_20570 IPR004358 Signal transduction histidine kinase-related protein, C-terminal APT56_20570 IPR003594 Histidine kinase/HSP90-like ATPase APT56_20570 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APT56_20575 IPR016032 Signal transduction response regulator, C-terminal effector APT56_20575 IPR039420 Transcriptional regulatory protein WalR-like APT56_20575 IPR001789 Signal transduction response regulator, receiver domain APT56_20575 IPR001867 OmpR/PhoB-type DNA-binding domain APT56_20575 IPR011006 CheY-like superfamily APT56_20575 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_20580 IPR002781 Transmembrane protein TauE-like APT56_20585 IPR036937 Fimbrial-type adhesion domain superfamily APT56_20585 IPR008966 Adhesion domain superfamily APT56_20585 IPR000259 Fimbrial-type adhesion domain APT56_20590 IPR037224 PapC, N-terminal domain superfamily APT56_20590 IPR025885 PapC, N-terminal domain APT56_20590 IPR025949 PapC-like, C-terminal domain APT56_20590 IPR042186 Outer membrane usher protein FimD, plug domain APT56_20590 IPR018030 Fimbrial membrane usher, conserved site APT56_20590 IPR000015 Outer membrane usher protein APT56_20595 IPR013783 Immunoglobulin-like fold APT56_20595 IPR016148 Pili assembly chaperone, C-terminal APT56_20595 IPR001829 Pili assembly chaperone, bacterial APT56_20595 IPR016147 Pili assembly chaperone, N-terminal APT56_20595 IPR018046 Pili assembly chaperone, conserved site APT56_20595 IPR008962 PapD-like superfamily APT56_20595 IPR036316 Pili assembly chaperone, C-terminal domain superfamily APT56_20610 IPR035919 EAL domain superfamily APT56_20610 IPR001633 EAL domain APT56_20610 IPR005330 MHYT domain APT56_20610 IPR029787 Nucleotide cyclase APT56_20610 IPR000014 PAS domain APT56_20610 IPR035965 PAS domain superfamily APT56_20610 IPR000160 GGDEF domain APT56_20615 IPR011006 CheY-like superfamily APT56_20615 IPR003594 Histidine kinase/HSP90-like ATPase APT56_20615 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APT56_20615 IPR001789 Signal transduction response regulator, receiver domain APT56_20615 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal APT56_20615 IPR005467 Histidine kinase domain APT56_20615 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain APT56_20615 IPR038388 RcsC, C-terminal domain superfamily APT56_20615 IPR030856 Sensor histidine kinase RcsC APT56_20615 IPR004358 Signal transduction histidine kinase-related protein, C-terminal APT56_20615 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily APT56_20620 IPR000792 Transcription regulator LuxR, C-terminal APT56_20620 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_20620 IPR030864 Transcriptional regulatory protein RcsB APT56_20620 IPR011006 CheY-like superfamily APT56_20620 IPR016032 Signal transduction response regulator, C-terminal effector APT56_20620 IPR001789 Signal transduction response regulator, receiver domain APT56_20650 IPR013783 Immunoglobulin-like fold APT56_20650 IPR008962 PapD-like superfamily APT56_20650 IPR036316 Pili assembly chaperone, C-terminal domain superfamily APT56_20650 IPR016147 Pili assembly chaperone, N-terminal APT56_20655 IPR042186 Outer membrane usher protein FimD, plug domain APT56_20655 IPR025885 PapC, N-terminal domain APT56_20655 IPR037224 PapC, N-terminal domain superfamily APT56_20655 IPR025949 PapC-like, C-terminal domain APT56_20655 IPR018030 Fimbrial membrane usher, conserved site APT56_20655 IPR000015 Outer membrane usher protein APT56_20660 IPR005546 Autotransporter beta-domain APT56_20660 IPR036709 Autotransporter beta-domain superfamily APT56_20660 IPR001087 GDSL lipase/esterase APT56_20660 IPR017186 Lipase, autotransporter EstA APT56_20660 IPR008265 Lipase, GDSL, active site APT56_20660 IPR006315 Outer membrane autotransporter barrel APT56_20660 IPR036514 SGNH hydrolase superfamily APT56_20665 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain APT56_20665 IPR003660 HAMP domain APT56_20665 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site APT56_20665 IPR004090 Chemotaxis methyl-accepting receptor APT56_20665 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily APT56_20665 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding APT56_20670 IPR036709 Autotransporter beta-domain superfamily APT56_20670 IPR000209 Peptidase S8/S53 domain APT56_20670 IPR023828 Peptidase S8, subtilisin, Ser-active site APT56_20670 IPR015500 Peptidase S8, subtilisin-related APT56_20670 IPR034061 Autotransporter serine protease peptidase domain APT56_20670 IPR005546 Autotransporter beta-domain APT56_20670 IPR036852 Peptidase S8/S53 domain superfamily APT56_20675 IPR036526 Carbon-nitrogen hydrolase superfamily APT56_20675 IPR003010 Carbon-nitrogen hydrolase APT56_20695 IPR014981 Flagellin D3 APT56_20695 IPR001029 Flagellin, D0/D1 domain APT56_20695 IPR001492 Flagellin APT56_20700 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain APT56_20700 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding APT56_20700 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site APT56_20700 IPR004090 Chemotaxis methyl-accepting receptor APT56_20700 IPR003660 HAMP domain APT56_20700 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily APT56_20705 IPR005064 Bordetella uptake gene APT56_20705 IPR042100 Bordetella uptake gene, domain 1 APT56_20725 IPR006144 Secretion protein HlyD, conserved site APT56_20725 IPR010129 Type I secretion membrane fusion protein, HlyD family APT56_20730 IPR003439 ABC transporter-like APT56_20730 IPR011527 ABC transporter type 1, transmembrane domain APT56_20730 IPR036640 ABC transporter type 1, transmembrane domain superfamily APT56_20730 IPR017871 ABC transporter, conserved site APT56_20730 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_20730 IPR003593 AAA+ ATPase domain APT56_20730 IPR010128 ATPase, type I secretion system, PrtD APT56_20750 IPR001736 Phospholipase D/Transphosphatidylase APT56_20750 IPR027379 Cardiolipin synthase N-terminal APT56_20750 IPR022924 Cardiolipin synthase APT56_20750 IPR030874 Cardiolipin synthase, Firmicutes-type APT56_20750 IPR025202 Phospholipase D-like domain APT56_20760 IPR009057 Homeobox-like domain superfamily APT56_20760 IPR003313 AraC-type arabinose-binding/dimerisation domain APT56_20760 IPR018062 HTH domain AraC-type, conserved site APT56_20760 IPR018060 DNA binding HTH domain, AraC-type APT56_20760 IPR037923 Transcription regulator HTH-like APT56_20765 IPR011234 Fumarylacetoacetase-like, C-terminal APT56_20765 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily APT56_20770 IPR036291 NAD(P)-binding domain superfamily APT56_20770 IPR006398 2-hydroxy-3-oxopropionate reductase APT56_20770 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain APT56_20770 IPR015815 3-hydroxyisobutyrate dehydrogenase-related APT56_20770 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding APT56_20770 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site APT56_20770 IPR013328 6-phosphogluconate dehydrogenase, domain 2 APT56_20770 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily APT56_20780 IPR005119 LysR, substrate-binding APT56_20780 IPR000847 Transcription regulator HTH, LysR APT56_20780 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_20780 IPR036390 Winged helix DNA-binding domain superfamily APT56_20785 IPR005064 Bordetella uptake gene APT56_20785 IPR042100 Bordetella uptake gene, domain 1 APT56_20795 IPR003010 Carbon-nitrogen hydrolase APT56_20795 IPR036526 Carbon-nitrogen hydrolase superfamily APT56_20795 IPR001110 Uncharacterised protein family UPF0012, conserved site APT56_20810 IPR000524 Transcription regulator HTH, GntR APT56_20810 IPR011711 GntR, C-terminal APT56_20810 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_20810 IPR036390 Winged helix DNA-binding domain superfamily APT56_20810 IPR008920 Transcription regulator FadR/GntR, C-terminal APT56_20815 IPR005064 Bordetella uptake gene APT56_20815 IPR042100 Bordetella uptake gene, domain 1 APT56_20820 IPR029055 Nucleophile aminohydrolases, N-terminal APT56_20825 IPR036034 PDZ superfamily APT56_20825 IPR011782 Peptidase S1C, Do APT56_20825 IPR001940 Peptidase S1C APT56_20825 IPR009003 Peptidase S1, PA clan APT56_20825 IPR001478 PDZ domain APT56_20835 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant APT56_20835 IPR003834 Cytochrome C biogenesis protein, transmembrane domain APT56_20835 IPR008979 Galactose-binding-like domain superfamily APT56_20835 IPR036249 Thioredoxin-like superfamily APT56_20835 IPR013766 Thioredoxin domain APT56_20835 IPR041017 DipZ, thioredoxin-like C-terminal domain APT56_20840 IPR041017 DipZ, thioredoxin-like C-terminal domain APT56_20840 IPR036249 Thioredoxin-like superfamily APT56_20840 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant APT56_20840 IPR013766 Thioredoxin domain APT56_20840 IPR003834 Cytochrome C biogenesis protein, transmembrane domain APT56_20840 IPR008979 Galactose-binding-like domain superfamily APT56_20845 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_20845 IPR039420 Transcriptional regulatory protein WalR-like APT56_20845 IPR011006 CheY-like superfamily APT56_20845 IPR001789 Signal transduction response regulator, receiver domain APT56_20845 IPR001867 OmpR/PhoB-type DNA-binding domain APT56_20845 IPR016032 Signal transduction response regulator, C-terminal effector APT56_20850 IPR003594 Histidine kinase/HSP90-like ATPase APT56_20850 IPR032404 Two-component sensor protein CpxA, periplasmic domain APT56_20850 IPR038515 CpxA, periplasmic domain superfamily APT56_20850 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain APT56_20850 IPR005467 Histidine kinase domain APT56_20850 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily APT56_20850 IPR004358 Signal transduction histidine kinase-related protein, C-terminal APT56_20850 IPR003660 HAMP domain APT56_20850 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APT56_20855 IPR003718 OsmC/Ohr family APT56_20855 IPR015946 K homology domain-like, alpha/beta APT56_20855 IPR019953 Organic hydroperoxide resistance protein famiy APT56_20855 IPR036102 OsmC/Ohr superfamily APT56_20860 IPR036390 Winged helix DNA-binding domain superfamily APT56_20860 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_20860 IPR000847 Transcription regulator HTH, LysR APT56_20860 IPR005119 LysR, substrate-binding APT56_20860 IPR037414 Transcriptional activator protein LysR, PBP2 domain APT56_20865 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_20865 IPR035906 MetI-like superfamily APT56_20870 IPR035906 MetI-like superfamily APT56_20870 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_20870 IPR025966 Oligopeptide transport permease C-like, N-terminal domain APT56_20875 IPR003593 AAA+ ATPase domain APT56_20875 IPR003439 ABC transporter-like APT56_20875 IPR017871 ABC transporter, conserved site APT56_20875 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal APT56_20875 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_20880 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_20880 IPR003593 AAA+ ATPase domain APT56_20880 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal APT56_20880 IPR003439 ABC transporter-like APT56_20880 IPR017871 ABC transporter, conserved site APT56_20885 IPR039424 Solute-binding protein family 5 APT56_20885 IPR000914 Solute-binding protein family 5 domain APT56_20885 IPR030678 Peptide/nickel binding protein, MppA-type APT56_20885 IPR023765 Solute-binding protein family 5, conserved site APT56_20890 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain APT56_20890 IPR008979 Galactose-binding-like domain superfamily APT56_20890 IPR005674 CocE/Serine esterase APT56_20890 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal APT56_20890 IPR029058 Alpha/Beta hydrolase fold APT56_20895 IPR023614 Porin domain superfamily APT56_20895 IPR002299 Porin, Neisseria sp. type APT56_20895 IPR001702 Porin, Gram-negative type APT56_20895 IPR033900 Porin domain, Gram-negative type APT56_20900 IPR032818 DedA family APT56_20900 IPR032816 SNARE associated Golgi protein APT56_20905 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APT56_20905 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APT56_20905 IPR000524 Transcription regulator HTH, GntR APT56_20905 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_20905 IPR036390 Winged helix DNA-binding domain superfamily APT56_20905 IPR004839 Aminotransferase, class I/classII APT56_20905 IPR015424 Pyridoxal phosphate-dependent transferase APT56_20910 IPR036390 Winged helix DNA-binding domain superfamily APT56_20910 IPR005119 LysR, substrate-binding APT56_20910 IPR000847 Transcription regulator HTH, LysR APT56_20910 IPR037416 Nodulation protein D, PBP2 APT56_20910 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_20920 IPR012451 Protein of unknown function DUF1656 APT56_20925 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APT56_20925 IPR006143 RND efflux pump, membrane fusion protein APT56_20930 IPR010131 RND efflux system, outer membrane lipoprotein, NodT APT56_20930 IPR003423 Outer membrane efflux protein APT56_20945 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain APT56_20945 IPR001296 Glycosyl transferase, family 1 APT56_20945 IPR023881 N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA APT56_20950 IPR007344 GrpB/Dephospho-CoA kinase APT56_20975 IPR001387 Cro/C1-type helix-turn-helix domain APT56_20975 IPR016759 HTH-type transcriptional repressor RghR APT56_20975 IPR010982 Lambda repressor-like, DNA-binding domain superfamily APT56_20980 IPR036188 FAD/NAD(P)-binding domain superfamily APT56_20980 IPR006076 FAD dependent oxidoreductase APT56_20985 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain APT56_20985 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_20985 IPR035906 MetI-like superfamily APT56_20990 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain APT56_20990 IPR035906 MetI-like superfamily APT56_20990 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_20995 IPR018313 Solute-binding protein family 3, conserved site APT56_20995 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APT56_21000 IPR003593 AAA+ ATPase domain APT56_21000 IPR003439 ABC transporter-like APT56_21000 IPR017871 ABC transporter, conserved site APT56_21000 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type APT56_21000 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_21005 IPR029510 Aldehyde dehydrogenase, glutamic acid active site APT56_21005 IPR016160 Aldehyde dehydrogenase, cysteine active site APT56_21005 IPR016162 Aldehyde dehydrogenase, N-terminal APT56_21005 IPR015590 Aldehyde dehydrogenase domain APT56_21005 IPR016161 Aldehyde/histidinol dehydrogenase APT56_21005 IPR016163 Aldehyde dehydrogenase, C-terminal APT56_21015 IPR002220 DapA-like APT56_21015 IPR013785 Aldolase-type TIM barrel APT56_21020 IPR023444 L-rhamnonate dehydratase APT56_21020 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site APT56_21020 IPR029065 Enolase C-terminal domain-like APT56_21020 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain APT56_21020 IPR029017 Enolase-like, N-terminal APT56_21020 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal APT56_21020 IPR036849 Enolase-like, C-terminal domain superfamily APT56_21025 IPR005255 PdxA family APT56_21030 IPR005064 Bordetella uptake gene APT56_21030 IPR042100 Bordetella uptake gene, domain 1 APT56_21035 IPR037405 HTH-type transcriptional regulator GbpR, PBP2 domain APT56_21035 IPR000847 Transcription regulator HTH, LysR APT56_21035 IPR036390 Winged helix DNA-binding domain superfamily APT56_21035 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_21035 IPR005119 LysR, substrate-binding APT56_21050 IPR032879 FixG, C-terminal immunoglobulin-like domain APT56_21050 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG APT56_21050 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APT56_21050 IPR013783 Immunoglobulin-like fold APT56_21050 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APT56_21055 IPR036909 Cytochrome c-like domain superfamily APT56_21055 IPR009056 Cytochrome c-like domain APT56_21055 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily APT56_21055 IPR004678 Cytochrome c oxidase cbb3-type, subunit III APT56_21055 IPR008168 Cytochrome c, class IC APT56_21055 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal APT56_21070 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site APT56_21070 IPR036927 Cytochrome c oxidase-like, subunit I superfamily APT56_21070 IPR004677 Cytochrome c oxidase cbb3-type, subunit I APT56_21070 IPR023616 Cytochrome c oxidase-like, subunit I domain APT56_21070 IPR000883 Cytochrome c oxidase subunit I APT56_21085 IPR005814 Aminotransferase class-III APT56_21085 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA APT56_21085 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APT56_21085 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APT56_21085 IPR015424 Pyridoxal phosphate-dependent transferase APT56_21090 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APT56_21090 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site APT56_21090 IPR004839 Aminotransferase, class I/classII APT56_21090 IPR015424 Pyridoxal phosphate-dependent transferase APT56_21090 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APT56_21090 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type APT56_21095 IPR029058 Alpha/Beta hydrolase fold APT56_21095 IPR000073 Alpha/beta hydrolase fold-1 APT56_21095 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase APT56_21100 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT56_21100 IPR004472 Dethiobiotin synthase BioD APT56_21100 IPR041698 Methyltransferase domain 25 APT56_21100 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_21105 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT56_21105 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_21105 IPR041698 Methyltransferase domain 25 APT56_21105 IPR004472 Dethiobiotin synthase BioD APT56_21120 IPR001279 Metallo-beta-lactamase APT56_21120 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like APT56_21120 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain APT56_21120 IPR022712 Beta-Casp domain APT56_21135 IPR005119 LysR, substrate-binding APT56_21135 IPR000847 Transcription regulator HTH, LysR APT56_21135 IPR036390 Winged helix DNA-binding domain superfamily APT56_21135 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_21140 IPR040442 Pyruvate kinase-like domain superfamily APT56_21140 IPR039556 ICL/PEPM domain APT56_21140 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site APT56_21140 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily APT56_21140 IPR006254 Isocitrate lyase APT56_21145 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF APT56_21145 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal APT56_21145 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 APT56_21150 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase APT56_21150 IPR004852 Di-haem cytochrome c peroxidase APT56_21150 IPR036909 Cytochrome c-like domain superfamily APT56_21150 IPR009056 Cytochrome c-like domain APT56_21155 IPR000847 Transcription regulator HTH, LysR APT56_21155 IPR005119 LysR, substrate-binding APT56_21155 IPR036390 Winged helix DNA-binding domain superfamily APT56_21155 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_21160 IPR011829 Tartrate dehydrogenase APT56_21160 IPR024084 Isopropylmalate dehydrogenase-like domain APT56_21160 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site APT56_21170 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase APT56_21170 IPR000462 CDP-alcohol phosphatidyltransferase APT56_21175 IPR035901 GIY-YIG endonuclease superfamily APT56_21175 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 APT56_21175 IPR010994 RuvA domain 2-like APT56_21175 IPR000305 GIY-YIG endonuclease APT56_21175 IPR036876 UVR domain superfamily APT56_21175 IPR001162 UvrC family homology region APT56_21175 IPR004791 UvrABC system, subunit C APT56_21175 IPR001943 UVR domain APT56_21175 IPR038476 UvrC homology region 2 superfamily APT56_21180 IPR022956 Beta-hexosaminidase, bacterial APT56_21180 IPR001764 Glycoside hydrolase, family 3, N-terminal APT56_21180 IPR017853 Glycoside hydrolase superfamily APT56_21180 IPR019800 Glycoside hydrolase, family 3, active site APT56_21180 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily APT56_21185 IPR002582 Holo-[acyl carrier protein] synthase APT56_21185 IPR037143 4'-phosphopantetheinyl transferase domain superfamily APT56_21185 IPR008278 4'-phosphopantetheinyl transferase domain APT56_21185 IPR004568 Phosphopantetheine-protein transferase domain APT56_21190 IPR036130 Pyridoxine 5'-phosphate synthase APT56_21190 IPR013785 Aldolase-type TIM barrel APT56_21190 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ APT56_21195 IPR003423 Outer membrane efflux protein APT56_21195 IPR010131 RND efflux system, outer membrane lipoprotein, NodT APT56_21200 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 APT56_21200 IPR001036 Acriflavin resistance protein APT56_21200 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APT56_21205 IPR006143 RND efflux pump, membrane fusion protein APT56_21205 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APT56_21225 IPR003725 Molybdenum-binding protein ModE, N-terminal APT56_21225 IPR004606 Molybdenum-pterin binding APT56_21225 IPR005116 Transport-associated OB, type 1 APT56_21225 IPR000847 Transcription regulator HTH, LysR APT56_21225 IPR008995 Molybdate/tungstate binding, C-terminal APT56_21225 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_21225 IPR016462 Molybdate-dependent transcriptional regulator ModE APT56_21225 IPR036390 Winged helix DNA-binding domain superfamily APT56_21230 IPR003439 ABC transporter-like APT56_21230 IPR017871 ABC transporter, conserved site APT56_21230 IPR003593 AAA+ ATPase domain APT56_21230 IPR004606 Molybdenum-pterin binding APT56_21230 IPR015852 ABC transporter, molybdenum import, ModC APT56_21230 IPR008995 Molybdate/tungstate binding, C-terminal APT56_21230 IPR011868 Molybdate ABC transporter, ATP-binding protein APT56_21230 IPR005116 Transport-associated OB, type 1 APT56_21230 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_21235 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_21235 IPR035906 MetI-like superfamily APT56_21235 IPR011867 Molybdate ABC transporter, permease protein APT56_21240 IPR005950 Molybdate ABC transporter, substrate-binding protein APT56_21245 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic APT56_21245 IPR017716 S-adenosylmethionine decarboxylase proenzyme APT56_21245 IPR016067 S-adenosylmethionine decarboxylase, core APT56_21265 IPR001045 Spermidine/spermine synthases APT56_21265 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT56_21265 IPR030374 Polyamine biosynthesis domain APT56_21275 IPR006076 FAD dependent oxidoreductase APT56_21275 IPR023080 D-amino acid dehydrogenase DadA APT56_21275 IPR036188 FAD/NAD(P)-binding domain superfamily APT56_21285 IPR003439 ABC transporter-like APT56_21285 IPR003593 AAA+ ATPase domain APT56_21285 IPR017871 ABC transporter, conserved site APT56_21285 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_21285 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB APT56_21290 IPR001851 ABC transporter, permease APT56_21300 IPR036812 NADP-dependent oxidoreductase domain superfamily APT56_21300 IPR023210 NADP-dependent oxidoreductase domain APT56_21305 IPR005064 Bordetella uptake gene APT56_21305 IPR042100 Bordetella uptake gene, domain 1 APT56_21310 IPR025110 AMP-binding enzyme, C-terminal domain APT56_21310 IPR020459 AMP-binding APT56_21310 IPR042099 AMP-dependent synthetase-like superfamily APT56_21310 IPR020845 AMP-binding, conserved site APT56_21310 IPR000873 AMP-dependent synthetase/ligase APT56_21315 IPR014748 Enoyl-CoA hydratase, C-terminal APT56_21315 IPR029045 ClpP/crotonase-like domain superfamily APT56_21315 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site APT56_21315 IPR001753 Enoyl-CoA hydratase/isomerase APT56_21325 IPR000485 AsnC-type HTH domain APT56_21325 IPR011711 GntR, C-terminal APT56_21325 IPR008920 Transcription regulator FadR/GntR, C-terminal APT56_21325 IPR000524 Transcription regulator HTH, GntR APT56_21325 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_21325 IPR036390 Winged helix DNA-binding domain superfamily APT56_21335 IPR016039 Thiolase-like APT56_21335 IPR020615 Thiolase, acyl-enzyme intermediate active site APT56_21335 IPR020610 Thiolase, active site APT56_21335 IPR020616 Thiolase, N-terminal APT56_21335 IPR020617 Thiolase, C-terminal APT56_21335 IPR002155 Thiolase APT56_21340 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal APT56_21340 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal APT56_21340 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily APT56_21340 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain APT56_21340 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal APT56_21340 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily APT56_21345 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain APT56_21345 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal APT56_21345 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily APT56_21345 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily APT56_21345 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal APT56_21345 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal APT56_21350 IPR036390 Winged helix DNA-binding domain superfamily APT56_21350 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_21350 IPR000847 Transcription regulator HTH, LysR APT56_21350 IPR005119 LysR, substrate-binding APT56_21355 IPR003673 CoA-transferase family III APT56_21355 IPR023606 CoA-transferase family III domain superfamily APT56_21365 IPR042100 Bordetella uptake gene, domain 1 APT56_21365 IPR005064 Bordetella uptake gene APT56_21370 IPR038673 Carbohydrate-selective porin OprB superfamily APT56_21370 IPR007049 Carbohydrate-selective porin OprB APT56_21375 IPR028082 Periplasmic binding protein-like I APT56_21375 IPR025997 Periplasmic binding protein APT56_21375 IPR013456 D-xylose ABC transporter, substrate-binding protein APT56_21380 IPR003439 ABC transporter-like APT56_21380 IPR003593 AAA+ ATPase domain APT56_21380 IPR013455 ABC transporter, D-xylose, ATP-binding protein APT56_21380 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_21385 IPR001851 ABC transporter, permease APT56_21390 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily APT56_21390 IPR019405 Lactonase, 7-bladed beta propeller APT56_21390 IPR015943 WD40/YVTN repeat-like-containing domain superfamily APT56_21395 IPR001509 NAD-dependent epimerase/dehydratase APT56_21395 IPR036291 NAD(P)-binding domain superfamily APT56_21400 IPR010982 Lambda repressor-like, DNA-binding domain superfamily APT56_21400 IPR006377 Catabolite control protein A APT56_21400 IPR000843 LacI-type HTH domain APT56_21400 IPR028082 Periplasmic binding protein-like I APT56_21405 IPR014347 Tautomerase/MIF superfamily APT56_21405 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type APT56_21405 IPR004370 4-oxalocrotonate tautomerase APT56_21410 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_21410 IPR000644 CBS domain APT56_21410 IPR017871 ABC transporter, conserved site APT56_21410 IPR005892 Glycine betaine transport ATP-binding subunit APT56_21410 IPR003593 AAA+ ATPase domain APT56_21410 IPR003439 ABC transporter-like APT56_21415 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_21415 IPR035906 MetI-like superfamily APT56_21425 IPR003333 Mycolic acid cyclopropane synthase APT56_21425 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT56_21430 IPR004812 Drug resistance transporter Bcr/CmlA subfamily APT56_21430 IPR011701 Major facilitator superfamily APT56_21430 IPR020846 Major facilitator superfamily domain APT56_21430 IPR036259 MFS transporter superfamily APT56_21430 IPR004734 Multidrug resistance protein APT56_21435 IPR001383 Ribosomal protein L28 APT56_21435 IPR026569 Ribosomal protein L28/L24 APT56_21435 IPR034704 L28p-like APT56_21435 IPR037147 Ribosomal protein L28/L24 superfamily APT56_21440 IPR001705 Ribosomal protein L33 APT56_21440 IPR038584 Ribosomal protein L33 superfamily APT56_21440 IPR011332 Zinc-binding ribosomal protein APT56_21445 IPR028081 Leucine-binding protein domain APT56_21445 IPR000709 Leu/Ile/Val-binding protein APT56_21445 IPR028082 Periplasmic binding protein-like I APT56_21455 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_21455 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal APT56_21455 IPR017871 ABC transporter, conserved site APT56_21455 IPR003593 AAA+ ATPase domain APT56_21455 IPR003439 ABC transporter-like APT56_21460 IPR036513 STAS domain superfamily APT56_21460 IPR002645 STAS domain APT56_21460 IPR011547 SLC26A/SulP transporter domain APT56_21460 IPR001902 SLC26A/SulP transporter APT56_21465 IPR012649 Phosphonopyruvate hydrolase APT56_21465 IPR039556 ICL/PEPM domain APT56_21465 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily APT56_21465 IPR040442 Pyruvate kinase-like domain superfamily APT56_21475 IPR015956 Penicillin-binding protein, C-terminal domain superfamily APT56_21475 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal APT56_21475 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A APT56_21475 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal APT56_21475 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily APT56_21475 IPR012338 Beta-lactamase/transpeptidase-like APT56_21485 IPR036390 Winged helix DNA-binding domain superfamily APT56_21485 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_21485 IPR000835 MarR-type HTH domain APT56_21490 IPR036259 MFS transporter superfamily APT56_21490 IPR011701 Major facilitator superfamily APT56_21490 IPR020846 Major facilitator superfamily domain APT56_21495 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site APT56_21495 IPR002302 Leucine-tRNA ligase APT56_21495 IPR015413 Methionyl/Leucyl tRNA synthetase APT56_21495 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT56_21495 IPR025709 Leucyl-tRNA synthetase, editing domain APT56_21495 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain APT56_21495 IPR002300 Aminoacyl-tRNA synthetase, class Ia APT56_21495 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding APT56_21495 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding APT56_21510 IPR015590 Aldehyde dehydrogenase domain APT56_21510 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site APT56_21510 IPR000965 GPR domain APT56_21510 IPR016163 Aldehyde dehydrogenase, C-terminal APT56_21510 IPR016162 Aldehyde dehydrogenase, N-terminal APT56_21510 IPR016161 Aldehyde/histidinol dehydrogenase APT56_21510 IPR012134 Glutamate-5-semialdehyde dehydrogenase APT56_21525 IPR000182 GNAT domain APT56_21525 IPR016181 Acyl-CoA N-acyltransferase APT56_21530 IPR023631 Amidase signature domain APT56_21530 IPR000120 Amidase APT56_21530 IPR036928 Amidase signature (AS) superfamily APT56_21530 IPR020556 Amidase, conserved site APT56_21540 IPR020846 Major facilitator superfamily domain APT56_21540 IPR011701 Major facilitator superfamily APT56_21540 IPR004638 Drug resistance transporter EmrB-like APT56_21540 IPR036259 MFS transporter superfamily APT56_21550 IPR026578 L-carnitine dehydrogenase APT56_21550 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding APT56_21550 IPR036291 NAD(P)-binding domain superfamily APT56_21550 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal APT56_21550 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily APT56_21550 IPR013328 6-phosphogluconate dehydrogenase, domain 2 APT56_21560 IPR023006 Uncharacterised protein family UPF0225 APT56_21560 IPR032710 NTF2-like domain superfamily APT56_21565 IPR036390 Winged helix DNA-binding domain superfamily APT56_21565 IPR005119 LysR, substrate-binding APT56_21565 IPR000847 Transcription regulator HTH, LysR APT56_21565 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_21575 IPR001303 Class II aldolase/adducin N-terminal APT56_21575 IPR036409 Class II aldolase/adducin N-terminal domain superfamily APT56_21615 IPR000847 Transcription regulator HTH, LysR APT56_21615 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_21615 IPR005119 LysR, substrate-binding APT56_21615 IPR036390 Winged helix DNA-binding domain superfamily APT56_21620 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain APT56_21620 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily APT56_21620 IPR037171 NagB/RpiA transferase-like APT56_21620 IPR003702 Acetyl-CoA hydrolase/transferase APT56_21620 IPR017821 Succinate CoA transferase APT56_21625 IPR036390 Winged helix DNA-binding domain superfamily APT56_21625 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_21625 IPR000847 Transcription regulator HTH, LysR APT56_21625 IPR005119 LysR, substrate-binding APT56_21630 IPR006686 Mechanosensitive ion channel MscS, conserved site APT56_21630 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 APT56_21630 IPR023408 Mechanosensitive ion channel MscS domain superfamily APT56_21630 IPR025692 Mechanosensitive ion channel inner membrane domain 1 APT56_21630 IPR024393 Mechanosensitive ion channel MscS, porin domain APT56_21630 IPR010920 LSM domain superfamily APT56_21630 IPR006685 Mechanosensitive ion channel MscS APT56_21630 IPR011066 Mechanosensitive ion channel MscS, C-terminal APT56_21670 IPR001610 PAC motif APT56_21670 IPR000014 PAS domain APT56_21670 IPR004090 Chemotaxis methyl-accepting receptor APT56_21670 IPR035965 PAS domain superfamily APT56_21670 IPR013655 PAS fold-3 APT56_21670 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain APT56_21670 IPR000700 PAS-associated, C-terminal APT56_21690 IPR013611 Transport-associated OB, type 2 APT56_21690 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_21690 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit APT56_21690 IPR017871 ABC transporter, conserved site APT56_21690 IPR003439 ABC transporter-like APT56_21690 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA APT56_21690 IPR003593 AAA+ ATPase domain APT56_21690 IPR008995 Molybdate/tungstate binding, C-terminal APT56_21695 IPR035906 MetI-like superfamily APT56_21695 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_21700 IPR035906 MetI-like superfamily APT56_21700 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_21705 IPR008794 Proline racemase family APT56_21720 IPR000644 CBS domain APT56_21740 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 APT56_21740 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain APT56_21740 IPR018136 Aconitase family, 4Fe-4S cluster binding site APT56_21740 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel APT56_21740 IPR004406 Aconitase B APT56_21740 IPR015932 Aconitase, domain 2 APT56_21740 IPR036008 Aconitase, iron-sulfur domain APT56_21740 IPR015929 Aconitase B, swivel APT56_21740 IPR015933 Aconitase B, HEAT-like domain APT56_21740 IPR036288 Aconitase B, HEAT-like domain superfamily APT56_21750 IPR025835 Thiopurine S-methyltransferase APT56_21750 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification APT56_21750 IPR008854 TPMT family APT56_21750 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT56_21755 IPR000782 FAS1 domain APT56_21755 IPR036378 FAS1 domain superfamily APT56_21775 IPR036812 NADP-dependent oxidoreductase domain superfamily APT56_21775 IPR023210 NADP-dependent oxidoreductase domain APT56_21780 IPR009057 Homeobox-like domain superfamily APT56_21780 IPR018060 DNA binding HTH domain, AraC-type APT56_21780 IPR009594 Transcription regulator HTH, AraC, N-terminal APT56_21790 IPR039425 RNA polymerase sigma-70 like APT56_21790 IPR014284 RNA polymerase sigma-70 like domain APT56_21790 IPR007627 RNA polymerase sigma-70 region 2 APT56_21790 IPR007630 RNA polymerase sigma-70 region 4 APT56_21790 IPR013325 RNA polymerase sigma factor, region 2 APT56_21790 IPR013324 RNA polymerase sigma factor, region 3/4-like APT56_21790 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_21805 IPR038444 DUF465 superfamily APT56_21805 IPR007420 Protein of unknown function DUF465 APT56_21820 IPR003779 Carboxymuconolactone decarboxylase-like APT56_21820 IPR029032 AhpD-like APT56_21820 IPR004675 Alkylhydroperoxidase AhpD core APT56_21825 IPR005828 Major facilitator, sugar transporter-like APT56_21825 IPR004736 MFS transporter, metabolite:H symporter APT56_21825 IPR015041 Osmosensory transporter coiled coil APT56_21825 IPR005829 Sugar transporter, conserved site APT56_21825 IPR020846 Major facilitator superfamily domain APT56_21825 IPR036292 Proline/betaine transporter ProP, C-terminal APT56_21825 IPR036259 MFS transporter superfamily APT56_21835 IPR020846 Major facilitator superfamily domain APT56_21835 IPR036259 MFS transporter superfamily APT56_21835 IPR011701 Major facilitator superfamily APT56_21835 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family APT56_21835 IPR005829 Sugar transporter, conserved site APT56_21840 IPR005670 Phosphate transport system permease protein 1 APT56_21840 IPR003593 AAA+ ATPase domain APT56_21840 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_21840 IPR015850 ABC transporter, phosphate import, PstB APT56_21840 IPR017871 ABC transporter, conserved site APT56_21840 IPR003439 ABC transporter-like APT56_21845 IPR005672 Phosphate transport system permease protein PstA APT56_21845 IPR035906 MetI-like superfamily APT56_21845 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_21850 IPR011864 Phosphate ABC transporter, permease protein PstC APT56_21850 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_21850 IPR035906 MetI-like superfamily APT56_21855 IPR024370 PBP domain APT56_21855 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS APT56_21860 IPR036832 Polyphosphate kinase N-terminal domain superfamily APT56_21860 IPR024953 Polyphosphate kinase middle domain APT56_21860 IPR041108 Polyphosphate kinase, C-terminal domain 1 APT56_21860 IPR025198 Polyphosphate kinase N-terminal domain APT56_21860 IPR025200 Polyphosphate kinase C-terminal domain 2 APT56_21860 IPR036830 Polyphosphate kinase middle domain superfamily APT56_21860 IPR003414 Polyphosphate kinase APT56_21865 IPR022371 Exopolyphosphatase APT56_21865 IPR003695 Ppx/GppA phosphatase APT56_21865 IPR030673 Pyrophosphatase, GppA/Ppx-type APT56_21875 IPR005843 Alpha-D-phosphohexomutase, C-terminal APT56_21875 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily APT56_21875 IPR016066 Alpha-D-phosphohexomutase, conserved site APT56_21875 IPR005841 Alpha-D-phosphohexomutase superfamily APT56_21875 IPR006352 Phosphoglucosamine mutase, bacterial type APT56_21875 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I APT56_21875 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III APT56_21875 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II APT56_21875 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III APT56_21880 IPR011005 Dihydropteroate synthase-like APT56_21880 IPR006390 Dihydropteroate synthase APT56_21880 IPR000489 Pterin-binding domain APT56_21885 IPR011546 Peptidase M41, FtsH extracellular APT56_21885 IPR003960 ATPase, AAA-type, conserved site APT56_21885 IPR003959 ATPase, AAA-type, core APT56_21885 IPR005936 Peptidase, FtsH APT56_21885 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_21885 IPR037219 Peptidase M41-like APT56_21885 IPR000642 Peptidase M41 APT56_21885 IPR003593 AAA+ ATPase domain APT56_21885 IPR041569 AAA ATPase, AAA+ lid domain APT56_21890 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT56_21890 IPR002877 Ribosomal RNA methyltransferase FtsJ domain APT56_21890 IPR015507 Ribosomal RNA large subunit methyltransferase E APT56_21895 IPR035920 YhbY-like superfamily APT56_21895 IPR001890 RNA-binding, CRM domain APT56_21895 IPR017924 RNA-binding protein YhbY APT56_21900 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal APT56_21900 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily APT56_21900 IPR018151 Transcription elongation factor, GreA/GreB, conserved site APT56_21900 IPR006359 Transcription elongation factor GreA APT56_21900 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily APT56_21900 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal APT56_21900 IPR023459 Transcription elongation factor GreA/GreB family APT56_21900 IPR028624 Transcription elongation factor GreA/GreB APT56_21905 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding APT56_21905 IPR003660 HAMP domain APT56_21905 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site APT56_21905 IPR004090 Chemotaxis methyl-accepting receptor APT56_21905 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily APT56_21905 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain APT56_21910 IPR006043 Xanthine/uracil/vitamin C permease APT56_21910 IPR006042 Xanthine/uracil permease APT56_21910 IPR019918 Pyrimidine permease RutG, predicted APT56_21925 IPR006469 NifC-like ABC-type porter APT56_21925 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_21925 IPR035906 MetI-like superfamily APT56_21925 IPR011867 Molybdate ABC transporter, permease protein APT56_21930 IPR013611 Transport-associated OB, type 2 APT56_21930 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit APT56_21930 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_21930 IPR008995 Molybdate/tungstate binding, C-terminal APT56_21930 IPR017871 ABC transporter, conserved site APT56_21930 IPR003439 ABC transporter-like APT56_21930 IPR003593 AAA+ ATPase domain APT56_21930 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA APT56_21935 IPR005119 LysR, substrate-binding APT56_21935 IPR036390 Winged helix DNA-binding domain superfamily APT56_21935 IPR000847 Transcription regulator HTH, LysR APT56_21935 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_21940 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site APT56_21940 IPR029033 Histidine phosphatase superfamily APT56_21940 IPR013078 Histidine phosphatase superfamily, clade-1 APT56_21940 IPR023086 Phosphoglycerate mutase, GpmB, probable APT56_21945 IPR036291 NAD(P)-binding domain superfamily APT56_21945 IPR020904 Short-chain dehydrogenase/reductase, conserved site APT56_21945 IPR002347 Short-chain dehydrogenase/reductase SDR APT56_21955 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain APT56_21955 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain APT56_21955 IPR011761 ATP-grasp fold APT56_21955 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain APT56_21955 IPR006275 Carbamoyl-phosphate synthase, large subunit APT56_21955 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain APT56_21955 IPR011607 Methylglyoxal synthase-like domain APT56_21955 IPR036914 Methylglyoxal synthase-like domain superfamily APT56_21955 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily APT56_21955 IPR016185 Pre-ATP-grasp domain superfamily APT56_21960 IPR017926 Glutamine amidotransferase APT56_21960 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain APT56_21960 IPR029062 Class I glutamine amidotransferase-like APT56_21960 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily APT56_21960 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain APT56_21960 IPR006274 Carbamoyl-phosphate synthase, small subunit APT56_21965 IPR013785 Aldolase-type TIM barrel APT56_21965 IPR004730 Transaldolase type 1 APT56_21965 IPR018225 Transaldolase, active site APT56_21965 IPR001585 Transaldolase/Fructose-6-phosphate aldolase APT56_21975 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain APT56_21975 IPR029016 GAF-like domain superfamily APT56_21975 IPR003594 Histidine kinase/HSP90-like ATPase APT56_21975 IPR005467 Histidine kinase domain APT56_21975 IPR013515 Phytochrome, central region APT56_21975 IPR001294 Phytochrome APT56_21975 IPR003018 GAF domain APT56_21975 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APT56_21975 IPR016132 Phytochrome chromophore attachment domain APT56_21975 IPR013654 PAS fold-2 APT56_21975 IPR035965 PAS domain superfamily APT56_21975 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily APT56_21980 IPR039420 Transcriptional regulatory protein WalR-like APT56_21980 IPR011006 CheY-like superfamily APT56_21980 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_21980 IPR016032 Signal transduction response regulator, C-terminal effector APT56_21980 IPR001789 Signal transduction response regulator, receiver domain APT56_21980 IPR001867 OmpR/PhoB-type DNA-binding domain APT56_21990 IPR016053 Haem oxygenase-like APT56_21990 IPR016084 Haem oxygenase-like, multi-helical APT56_21995 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_21995 IPR035906 MetI-like superfamily APT56_22000 IPR003593 AAA+ ATPase domain APT56_22000 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_22000 IPR003439 ABC transporter-like APT56_22010 IPR003673 CoA-transferase family III APT56_22010 IPR023606 CoA-transferase family III domain superfamily APT56_22015 IPR023628 Recombination protein RecR, C4-type zinc finger APT56_22015 IPR006171 TOPRIM domain APT56_22015 IPR034137 RecR, TOPRIM domain APT56_22015 IPR000093 DNA recombination protein RecR APT56_22015 IPR023627 Recombination protein RecR APT56_22020 IPR004401 Nucleoid-associated protein YbaB/EbfC family APT56_22020 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily APT56_22025 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily APT56_22025 IPR001270 ClpA/B family APT56_22025 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_22025 IPR021029 DNA polymerase III, tau subunit, domain V APT56_22025 IPR012763 DNA polymerase III, subunit gamma/ tau APT56_22025 IPR022754 DNA polymerase III, gamma subunit, domain III APT56_22025 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV APT56_22025 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal APT56_22025 IPR003593 AAA+ ATPase domain APT56_22035 IPR034739 UvrD/AddA helicase, N-terminal APT56_22035 IPR014016 UvrD-like helicase, ATP-binding domain APT56_22035 IPR011335 Restriction endonuclease type II-like APT56_22035 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type APT56_22035 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_22035 IPR011604 Exonuclease, phage-type/RecB, C-terminal APT56_22035 IPR000212 DNA helicase, UvrD/REP type APT56_22035 IPR014017 UvrD-like DNA helicase, C-terminal APT56_22035 IPR014152 DNA helicase subunit AddA APT56_22050 IPR013785 Aldolase-type TIM barrel APT56_22050 IPR004136 Nitronate monooxygenase APT56_22055 IPR029060 PIN-like domain superfamily APT56_22065 IPR005064 Bordetella uptake gene APT56_22065 IPR042100 Bordetella uptake gene, domain 1 APT56_22070 IPR003673 CoA-transferase family III APT56_22070 IPR023606 CoA-transferase family III domain superfamily APT56_22075 IPR014748 Enoyl-CoA hydratase, C-terminal APT56_22075 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB APT56_22075 IPR029045 ClpP/crotonase-like domain superfamily APT56_22075 IPR001753 Enoyl-CoA hydratase/isomerase APT56_22085 IPR013785 Aldolase-type TIM barrel APT56_22085 IPR000891 Pyruvate carboxyltransferase APT56_22090 IPR000873 AMP-dependent synthetase/ligase APT56_22090 IPR020845 AMP-binding, conserved site APT56_22090 IPR025110 AMP-binding enzyme, C-terminal domain APT56_22095 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site APT56_22095 IPR029045 ClpP/crotonase-like domain superfamily APT56_22095 IPR001753 Enoyl-CoA hydratase/isomerase APT56_22095 IPR014748 Enoyl-CoA hydratase, C-terminal APT56_22105 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal APT56_22105 IPR012338 Beta-lactamase/transpeptidase-like APT56_22105 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A APT56_22115 IPR013149 Alcohol dehydrogenase, C-terminal APT56_22115 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site APT56_22115 IPR011032 GroES-like superfamily APT56_22115 IPR036291 NAD(P)-binding domain superfamily APT56_22115 IPR020843 Polyketide synthase, enoylreductase domain APT56_22115 IPR013154 Alcohol dehydrogenase, N-terminal APT56_22125 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain APT56_22125 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC APT56_22125 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily APT56_22130 IPR002104 Integrase, catalytic domain APT56_22130 IPR013762 Integrase-like, catalytic domain superfamily APT56_22130 IPR010998 Integrase/recombinase, N-terminal APT56_22130 IPR004107 Integrase, SAM-like, N-terminal APT56_22130 IPR011932 Tyrosine recombinase XerD APT56_22130 IPR011010 DNA breaking-rejoining enzyme, catalytic core APT56_22130 IPR023009 Tyrosine recombinase XerC/XerD APT56_22135 IPR036390 Winged helix DNA-binding domain superfamily APT56_22135 IPR005119 LysR, substrate-binding APT56_22135 IPR000847 Transcription regulator HTH, LysR APT56_22135 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_22140 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding APT56_22140 IPR000399 TPP-binding enzyme, conserved site APT56_22140 IPR012846 Acetolactate synthase, large subunit, biosynthetic APT56_22140 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain APT56_22140 IPR012000 Thiamine pyrophosphate enzyme, central domain APT56_22140 IPR039368 Acetolactate synthase large subunit, TPP binding domain APT56_22140 IPR029035 DHS-like NAD/FAD-binding domain superfamily APT56_22140 IPR029061 Thiamin diphosphate-binding fold APT56_22145 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain APT56_22145 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal APT56_22145 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal APT56_22145 IPR006089 Acyl-CoA dehydrogenase, conserved site APT56_22145 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily APT56_22145 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal APT56_22145 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily APT56_22150 IPR000531 TonB-dependent receptor-like, beta-barrel APT56_22150 IPR012910 TonB-dependent receptor, plug domain APT56_22150 IPR037066 TonB-dependent receptor, plug domain superfamily APT56_22150 IPR039423 TonB-dependent receptor-like APT56_22150 IPR010105 TonB-dependent siderophore receptor APT56_22150 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily APT56_22170 IPR002539 MaoC-like dehydratase domain APT56_22170 IPR029069 HotDog domain superfamily APT56_22170 IPR016790 Thiol ester hydratase, Rv0216, predicted APT56_22190 IPR023000 Shikimate kinase, conserved site APT56_22190 IPR000623 Shikimate kinase/Threonine synthase-like 1 APT56_22190 IPR031322 Shikimate kinase/gluconokinase APT56_22190 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_22200 IPR025110 AMP-binding enzyme, C-terminal domain APT56_22200 IPR000873 AMP-dependent synthetase/ligase APT56_22200 IPR011957 Benzoate-CoA ligase family APT56_22215 IPR001851 ABC transporter, permease APT56_22225 IPR003593 AAA+ ATPase domain APT56_22225 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal APT56_22225 IPR017871 ABC transporter, conserved site APT56_22225 IPR003439 ABC transporter-like APT56_22225 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_22230 IPR003593 AAA+ ATPase domain APT56_22230 IPR017871 ABC transporter, conserved site APT56_22230 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_22230 IPR003439 ABC transporter-like APT56_22230 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein APT56_22235 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain APT56_22235 IPR029061 Thiamin diphosphate-binding fold APT56_22235 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding APT56_22240 IPR003593 AAA+ ATPase domain APT56_22240 IPR017871 ABC transporter, conserved site APT56_22240 IPR003439 ABC transporter-like APT56_22240 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_22240 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type APT56_22245 IPR035906 MetI-like superfamily APT56_22245 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_22245 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain APT56_22250 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APT56_22250 IPR037297 Probable ABC transporter arginine-binding protein ArtJ, PBP2 domain APT56_22255 IPR005925 Agmatinase-related APT56_22255 IPR006035 Ureohydrolase APT56_22255 IPR023696 Ureohydrolase domain superfamily APT56_22255 IPR020855 Ureohydrolase, manganese-binding site APT56_22260 IPR036390 Winged helix DNA-binding domain superfamily APT56_22260 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_22260 IPR014757 Transcription regulator IclR, C-terminal APT56_22260 IPR005471 Transcription regulator IclR, N-terminal APT56_22260 IPR029016 GAF-like domain superfamily APT56_22265 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter APT56_22265 IPR018313 Solute-binding protein family 3, conserved site APT56_22265 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APT56_22270 IPR042100 Bordetella uptake gene, domain 1 APT56_22270 IPR005064 Bordetella uptake gene APT56_22275 IPR004163 Coenzyme A transferase binding site APT56_22275 IPR037171 NagB/RpiA transferase-like APT56_22275 IPR012792 3-oxoacid CoA-transferase, subunit A APT56_22275 IPR004165 Coenzyme A transferase family I APT56_22280 IPR004164 Coenzyme A transferase active site APT56_22280 IPR004165 Coenzyme A transferase family I APT56_22280 IPR012791 3-oxoacid CoA-transferase, subunit B APT56_22280 IPR037171 NagB/RpiA transferase-like APT56_22285 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR APT56_22285 IPR005471 Transcription regulator IclR, N-terminal APT56_22285 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_22285 IPR036390 Winged helix DNA-binding domain superfamily APT56_22285 IPR029016 GAF-like domain superfamily APT56_22285 IPR014757 Transcription regulator IclR, C-terminal APT56_22290 IPR038385 Threonylcarbamoyl-AMP synthase, C-terminal domain superfamily APT56_22290 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily APT56_22290 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 APT56_22290 IPR005145 Putative GTP-binding controlling metal-binding domain APT56_22290 IPR006070 YrdC-like domain APT56_22295 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain APT56_22295 IPR011054 Rudiment single hybrid motif APT56_22295 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit APT56_22295 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type APT56_22295 IPR011761 ATP-grasp fold APT56_22295 IPR013815 ATP-grasp fold, subdomain 1 APT56_22295 IPR016185 Pre-ATP-grasp domain superfamily APT56_22300 IPR024694 PurE, prokaryotic type APT56_22300 IPR000031 PurE domain APT56_22300 IPR035893 PurE domain superfamily APT56_22300 IPR033747 Class I PurE APT56_22305 IPR003752 Disulphide bond formation protein DsbB/BdbC APT56_22305 IPR022920 Disulphide bond formation protein DsbB APT56_22305 IPR023380 DsbB-like superfamily APT56_22310 IPR018236 SAICAR synthetase, conserved site APT56_22310 IPR028923 SAICAR synthetase/ADE2, N-terminal APT56_22310 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase APT56_22320 IPR013785 Aldolase-type TIM barrel APT56_22320 IPR000771 Fructose-bisphosphate aldolase, class-II APT56_22320 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype APT56_22325 IPR036928 Amidase signature (AS) superfamily APT56_22325 IPR020556 Amidase, conserved site APT56_22325 IPR000120 Amidase APT56_22325 IPR023631 Amidase signature domain APT56_22330 IPR017871 ABC transporter, conserved site APT56_22330 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal APT56_22330 IPR003593 AAA+ ATPase domain APT56_22330 IPR003439 ABC transporter-like APT56_22330 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_22335 IPR025966 Oligopeptide transport permease C-like, N-terminal domain APT56_22335 IPR035906 MetI-like superfamily APT56_22335 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_22340 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_22340 IPR035906 MetI-like superfamily APT56_22345 IPR023765 Solute-binding protein family 5, conserved site APT56_22345 IPR039424 Solute-binding protein family 5 APT56_22345 IPR030678 Peptide/nickel binding protein, MppA-type APT56_22345 IPR000914 Solute-binding protein family 5 domain APT56_22350 IPR036264 Bacterial exopeptidase dimerisation domain APT56_22350 IPR011650 Peptidase M20, dimerisation domain APT56_22350 IPR002933 Peptidase M20 APT56_22350 IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase APT56_22365 IPR001991 Sodium:dicarboxylate symporter APT56_22365 IPR023954 C4-dicarboxylate transport protein APT56_22365 IPR018107 Sodium:dicarboxylate symporter, conserved site APT56_22365 IPR036458 Sodium:dicarboxylate symporter superfamily APT56_22385 IPR011059 Metal-dependent hydrolase, composite domain superfamily APT56_22385 IPR013108 Amidohydrolase 3 APT56_22385 IPR012696 Phosphonate metabolism PhnM APT56_22385 IPR032466 Metal-dependent hydrolase APT56_22390 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_22390 IPR003593 AAA+ ATPase domain APT56_22390 IPR017871 ABC transporter, conserved site APT56_22390 IPR003439 ABC transporter-like APT56_22390 IPR012701 Phosphonate C-P lyase system, PhnL APT56_22395 IPR003593 AAA+ ATPase domain APT56_22395 IPR003439 ABC transporter-like APT56_22395 IPR017871 ABC transporter, conserved site APT56_22395 IPR012700 Phosphonate C-P lyase system, PhnK APT56_22395 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_22400 IPR010306 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase APT56_22405 IPR008773 Phosphonate metabolism protein PhnI APT56_22410 IPR008772 Bacterial phosphonate metabolism, PhnH APT56_22410 IPR038058 PhnH-like superfamily APT56_22415 IPR009609 Phosphonate metabolism PhnG APT56_22420 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily APT56_22420 IPR012702 Phosphonate C-P lyase system, transcriptional regulator PhnF APT56_22420 IPR000524 Transcription regulator HTH, GntR APT56_22420 IPR011663 UbiC transcription regulator-associated APT56_22420 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_22420 IPR036390 Winged helix DNA-binding domain superfamily APT56_22425 IPR032466 Metal-dependent hydrolase APT56_22425 IPR011059 Metal-dependent hydrolase, composite domain superfamily APT56_22425 IPR013108 Amidohydrolase 3 APT56_22425 IPR012696 Phosphonate metabolism PhnM APT56_22430 IPR009389 Protein of unknown function DUF1045 APT56_22430 IPR008145 Guanylate kinase/L-type calcium channel beta subunit APT56_22430 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN APT56_22430 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_22435 IPR008145 Guanylate kinase/L-type calcium channel beta subunit APT56_22435 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_22435 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN APT56_22440 IPR000847 Transcription regulator HTH, LysR APT56_22440 IPR005119 LysR, substrate-binding APT56_22440 IPR036390 Winged helix DNA-binding domain superfamily APT56_22440 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_22445 IPR000101 Gamma-glutamyltranspeptidase APT56_22445 IPR029055 Nucleophile aminohydrolases, N-terminal APT56_22450 IPR005064 Bordetella uptake gene APT56_22450 IPR042100 Bordetella uptake gene, domain 1 APT56_22460 IPR005769 ABC transporter, permease PhnE/PtxC APT56_22460 IPR035906 MetI-like superfamily APT56_22460 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_22465 IPR017797 Phosphonate ABC transporter, substrate-binding protein APT56_22465 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein APT56_22470 IPR017871 ABC transporter, conserved site APT56_22470 IPR012693 ABC transporter, phosphonate import, PhnC APT56_22470 IPR003439 ABC transporter-like APT56_22470 IPR003593 AAA+ ATPase domain APT56_22470 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_22480 IPR001845 HTH ArsR-type DNA-binding domain APT56_22480 IPR036390 Winged helix DNA-binding domain superfamily APT56_22480 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_22480 IPR011991 ArsR-like helix-turn-helix domain APT56_22490 IPR022967 RNA-binding domain, S1 APT56_22490 IPR006196 RNA-binding domain, S1, IF1 type APT56_22490 IPR012340 Nucleic acid-binding, OB-fold APT56_22490 IPR004368 Translation initiation factor IF-1 APT56_22500 IPR018392 LysM domain APT56_22500 IPR011055 Duplicated hybrid motif APT56_22500 IPR013731 Opacity-associated protein A, N-terminal APT56_22500 IPR016047 Peptidase M23 APT56_22510 IPR008284 Molybdenum cofactor biosynthesis, conserved site APT56_22510 IPR001453 MoaB/Mog domain APT56_22510 IPR036425 MoaB/Mog-like domain superfamily APT56_22520 IPR001204 Phosphate transporter APT56_22540 IPR023859 DNA-binding protein, curved-DNA APT56_22540 IPR001623 DnaJ domain APT56_22540 IPR018253 DnaJ domain, conserved site APT56_22540 IPR036869 Chaperone J-domain superfamily APT56_22540 IPR002939 Chaperone DnaJ, C-terminal APT56_22540 IPR008971 HSP40/DnaJ peptide-binding APT56_22545 IPR016181 Acyl-CoA N-acyltransferase APT56_22545 IPR024170 Aminoglycoside N6-acetyltransferase APT56_22545 IPR000182 GNAT domain APT56_22555 IPR036282 Glutathione S-transferase, C-terminal domain superfamily APT56_22555 IPR040079 Glutathione Transferase family APT56_22555 IPR004045 Glutathione S-transferase, N-terminal APT56_22555 IPR036249 Thioredoxin-like superfamily APT56_22555 IPR034338 Glutathione S-transferases, subfamily 4, C-terminal APT56_22555 IPR010987 Glutathione S-transferase, C-terminal-like APT56_22565 IPR024501 Protein of unknown function DUF3141 APT56_22565 IPR029058 Alpha/Beta hydrolase fold APT56_22570 IPR012147 Phosphate acetyl/butyryltransferase APT56_22570 IPR002505 Phosphate acetyl/butaryl transferase APT56_22575 IPR004372 Acetate/propionate kinase APT56_22575 IPR000890 Aliphatic acid kinase, short-chain APT56_22575 IPR023865 Aliphatic acid kinase, short-chain, conserved site APT56_22580 IPR002347 Short-chain dehydrogenase/reductase SDR APT56_22580 IPR036291 NAD(P)-binding domain superfamily APT56_22580 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) APT56_22585 IPR002645 STAS domain APT56_22585 IPR011547 SLC26A/SulP transporter domain APT56_22585 IPR036513 STAS domain superfamily APT56_22585 IPR001902 SLC26A/SulP transporter APT56_22590 IPR042100 Bordetella uptake gene, domain 1 APT56_22590 IPR005064 Bordetella uptake gene APT56_22595 IPR036043 Phosphoglycerate kinase superfamily APT56_22595 IPR015911 Phosphoglycerate kinase, conserved site APT56_22595 IPR015824 Phosphoglycerate kinase, N-terminal APT56_22595 IPR001576 Phosphoglycerate kinase APT56_22600 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site APT56_22600 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain APT56_22600 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain APT56_22600 IPR036291 NAD(P)-binding domain superfamily APT56_22600 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family APT56_22600 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I APT56_22605 IPR005474 Transketolase, N-terminal APT56_22605 IPR033248 Transketolase, C-terminal domain APT56_22605 IPR020826 Transketolase binding site APT56_22605 IPR005478 Transketolase, bacterial-like APT56_22605 IPR005475 Transketolase-like, pyrimidine-binding domain APT56_22605 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II APT56_22605 IPR029061 Thiamin diphosphate-binding fold APT56_22605 IPR033247 Transketolase family APT56_22615 IPR015947 PUA-like superfamily APT56_22615 IPR006700 Ribosomal RNA small subunit methyltransferase E APT56_22615 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APT56_22615 IPR029028 Alpha/beta knot methyltransferases APT56_22620 IPR035905 Barstar-like superfamily APT56_22620 IPR000468 Barstar (barnase inhibitor) APT56_22630 IPR002505 Phosphate acetyl/butaryl transferase APT56_22630 IPR042112 Phosphate acetyltransferase, domain 2 APT56_22630 IPR012301 Malic enzyme, N-terminal domain APT56_22630 IPR042113 Phosphate acetyltransferase, domain 1 APT56_22630 IPR036291 NAD(P)-binding domain superfamily APT56_22630 IPR037062 Malic enzyme, N-terminal domain superfamily APT56_22630 IPR012188 NAD(P)-dependent malic enzyme APT56_22630 IPR012302 Malic enzyme, NAD-binding APT56_22630 IPR015884 Malic enzyme, conserved site APT56_22640 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APT56_22640 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APT56_22640 IPR015424 Pyridoxal phosphate-dependent transferase APT56_22640 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site APT56_22640 IPR004839 Aminotransferase, class I/classII APT56_22645 IPR008258 Transglycosylase SLT domain 1 APT56_22645 IPR000189 Prokaryotic transglycosylase, active site APT56_22645 IPR023664 Murein transglycosylase-C APT56_22645 IPR023346 Lysozyme-like domain superfamily APT56_22645 IPR024570 Murein transglycosylase-C, N-terminal APT56_22650 IPR002830 UbiD decarboxylyase family APT56_22650 IPR023677 UbiD decarboxylyase, bacteria APT56_22665 IPR010279 Inner membrane protein YqjD/ElaB APT56_22675 IPR003593 AAA+ ATPase domain APT56_22675 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_22675 IPR005890 Nitrate transport ATP-binding subunit C/D APT56_22675 IPR017871 ABC transporter, conserved site APT56_22675 IPR003439 ABC transporter-like APT56_22680 IPR035906 MetI-like superfamily APT56_22680 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_22680 IPR005889 Nitrate transport permease APT56_22685 IPR006311 Twin-arginine translocation pathway, signal sequence APT56_22690 IPR036291 NAD(P)-binding domain superfamily APT56_22690 IPR012409 Sirohaem synthase APT56_22690 IPR006366 Uroporphyrin-III C-methyltransferase APT56_22690 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site APT56_22690 IPR006367 Sirohaem synthase, N-terminal APT56_22690 IPR019478 Sirohaem synthase, dimerisation domain APT56_22690 IPR028281 Siroheme synthase, central domain APT56_22690 IPR014776 Tetrapyrrole methylase, subdomain 2 APT56_22690 IPR000878 Tetrapyrrole methylase APT56_22690 IPR035996 Tetrapyrrole methylase superfamily APT56_22690 IPR014777 Tetrapyrrole methylase, subdomain 1 APT56_22695 IPR034332 Uracil phosphoribosyltransferase, bacterial-type APT56_22695 IPR000836 Phosphoribosyltransferase domain APT56_22695 IPR029057 Phosphoribosyltransferase-like APT56_22695 IPR005765 Uracil phosphoribosyl transferase APT56_22700 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C APT56_22700 IPR012338 Beta-lactamase/transpeptidase-like APT56_22705 IPR028081 Leucine-binding protein domain APT56_22705 IPR000709 Leu/Ile/Val-binding protein APT56_22705 IPR028082 Periplasmic binding protein-like I APT56_22710 IPR012349 FMN-binding split barrel APT56_22710 IPR002563 Flavin reductase like domain APT56_22715 IPR036661 Luciferase-like domain superfamily APT56_22715 IPR011251 Luciferase-like domain APT56_22725 IPR042119 QueA, domain 2 APT56_22725 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily APT56_22725 IPR042118 QueA, domain 1 APT56_22725 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA APT56_22730 IPR002616 tRNA-guanine(15) transglycosylase-like APT56_22730 IPR036511 Queuine tRNA-ribosyltransferase-like APT56_22730 IPR004803 tRNA-guanine transglycosylase APT56_22735 IPR003849 Preprotein translocase YajC APT56_22740 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site APT56_22740 IPR027398 SecD export protein N-terminal TM domain APT56_22740 IPR022645 Protein-export membrane protein SecD/SecF, bacterial APT56_22740 IPR005791 Protein translocase subunit SecD APT56_22740 IPR001036 Acriflavin resistance protein APT56_22740 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial APT56_22745 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial APT56_22745 IPR022645 Protein-export membrane protein SecD/SecF, bacterial APT56_22745 IPR005665 Protein-export membrane protein SecF, bacterial APT56_22745 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site APT56_22755 IPR003156 DHHA1 domain APT56_22755 IPR002318 Alanine-tRNA ligase, class IIc APT56_22755 IPR009000 Translation protein, beta-barrel domain superfamily APT56_22755 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily APT56_22755 IPR012947 Threonyl/alanyl tRNA synthetase, SAD APT56_22755 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain APT56_22755 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal APT56_22755 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria APT56_22755 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily APT56_22765 IPR007197 Radical SAM APT56_22765 IPR002792 TRAM domain APT56_22765 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB APT56_22765 IPR038135 Methylthiotransferase, N-terminal domain superfamily APT56_22765 IPR013848 Methylthiotransferase, N-terminal APT56_22765 IPR020612 Methylthiotransferase, conserved site APT56_22765 IPR023404 Radical SAM, alpha/beta horseshoe APT56_22765 IPR006638 Elp3/MiaB/NifB APT56_22765 IPR005839 Methylthiotransferase APT56_22770 IPR003714 PhoH-like protein APT56_22770 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_22775 IPR020549 Endoribonuclease YbeY, conserved site APT56_22775 IPR023091 Metalloprotease catalytic domain superfamily, predicted APT56_22775 IPR002036 Endoribonuclease YbeY APT56_22780 IPR000644 CBS domain APT56_22780 IPR036318 FAD-binding, type PCMH-like superfamily APT56_22780 IPR016169 FAD-binding, type PCMH, subdomain 2 APT56_22780 IPR005170 Transporter-associated domain APT56_22785 IPR003010 Carbon-nitrogen hydrolase APT56_22785 IPR004563 Apolipoprotein N-acyltransferase APT56_22785 IPR036526 Carbon-nitrogen hydrolase superfamily APT56_22790 IPR036812 NADP-dependent oxidoreductase domain superfamily APT56_22790 IPR023210 NADP-dependent oxidoreductase domain APT56_22790 IPR020471 Aldo/keto reductase APT56_22825 IPR016032 Signal transduction response regulator, C-terminal effector APT56_22825 IPR000792 Transcription regulator LuxR, C-terminal APT56_22825 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_22830 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB APT56_22830 IPR024177 Biotin synthase APT56_22830 IPR006638 Elp3/MiaB/NifB APT56_22830 IPR013785 Aldolase-type TIM barrel APT56_22830 IPR010722 Biotin and thiamin synthesis-associated domain APT56_22830 IPR007197 Radical SAM APT56_22845 IPR037944 Peroxiredoxin-5-like APT56_22845 IPR013740 Redoxin APT56_22845 IPR036249 Thioredoxin-like superfamily APT56_22845 IPR013766 Thioredoxin domain APT56_22855 IPR002925 Dienelactone hydrolase APT56_22855 IPR029058 Alpha/Beta hydrolase fold APT56_22865 IPR023045 Molybdenum cofactor biosynthesis C APT56_22865 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily APT56_22865 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain APT56_22875 IPR003448 Molybdopterin biosynthesis MoaE APT56_22875 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily APT56_22880 IPR036425 MoaB/Mog-like domain superfamily APT56_22880 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria APT56_22880 IPR001453 MoaB/Mog domain APT56_22880 IPR008284 Molybdenum cofactor biosynthesis, conserved site APT56_22880 IPR012245 Molybdenum cofactor biosynthesis protein MoaB APT56_22890 IPR013482 Molybdenum cofactor guanylyltransferase APT56_22890 IPR025877 MobA-like NTP transferase APT56_22890 IPR029044 Nucleotide-diphospho-sugar transferases APT56_22895 IPR010505 Molybdenum cofactor synthesis C-terminal APT56_22895 IPR007197 Radical SAM APT56_22895 IPR013483 Molybdenum cofactor biosynthesis protein A APT56_22895 IPR006638 Elp3/MiaB/NifB APT56_22895 IPR013785 Aldolase-type TIM barrel APT56_22895 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site APT56_22910 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain APT56_22910 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily APT56_22910 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily APT56_22910 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APT56_22910 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APT56_22910 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site APT56_22910 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain APT56_22915 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APT56_22915 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APT56_22915 IPR006657 Molybdopterin dinucleotide-binding domain APT56_22915 IPR006478 Formate dehydrogenase, alpha subunit APT56_22915 IPR041924 Formate dehydrogenase H, N-terminal APT56_22915 IPR009010 Aspartate decarboxylase-like domain superfamily APT56_22915 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding APT56_22915 IPR006656 Molybdopterin oxidoreductase APT56_22915 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain APT56_22915 IPR036010 2Fe-2S ferredoxin-like superfamily APT56_22915 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain APT56_22920 IPR016193 Cytidine deaminase-like APT56_22920 IPR003786 Sulfur carrier protein FdhD APT56_22930 IPR036259 MFS transporter superfamily APT56_22930 IPR020846 Major facilitator superfamily domain APT56_22930 IPR004741 Oxalate/formate antiporter family transporter APT56_22930 IPR011701 Major facilitator superfamily APT56_22930 IPR026355 Oxalate/formate antiporter APT56_22935 IPR007848 Methyltransferase small domain APT56_22935 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT56_22935 IPR002052 DNA methylase, N-6 adenine-specific, conserved site APT56_22935 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase APT56_22955 IPR000847 Transcription regulator HTH, LysR APT56_22955 IPR036390 Winged helix DNA-binding domain superfamily APT56_22955 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_22955 IPR005119 LysR, substrate-binding APT56_22960 IPR018187 Asp/Glu racemase, active site 1 APT56_22960 IPR001920 Asp/Glu racemase APT56_22960 IPR015942 Asp/Glu/hydantoin racemase APT56_22960 IPR033134 Asp/Glu racemase, active site 2 APT56_22960 IPR004391 Glutamate racemase APT56_22965 IPR006016 UspA APT56_22965 IPR006015 Universal stress protein A family APT56_22965 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT56_22970 IPR006015 Universal stress protein A family APT56_22970 IPR006016 UspA APT56_22975 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain APT56_22975 IPR005467 Histidine kinase domain APT56_22975 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APT56_22975 IPR003594 Histidine kinase/HSP90-like ATPase APT56_22975 IPR038429 PhoQ Sensor superfamily APT56_22975 IPR003660 HAMP domain APT56_22975 IPR004358 Signal transduction histidine kinase-related protein, C-terminal APT56_22975 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily APT56_22975 IPR015014 PhoQ Sensor APT56_22980 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_22980 IPR039420 Transcriptional regulatory protein WalR-like APT56_22980 IPR001789 Signal transduction response regulator, receiver domain APT56_22980 IPR011006 CheY-like superfamily APT56_22980 IPR001867 OmpR/PhoB-type DNA-binding domain APT56_22995 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain APT56_22995 IPR017927 FAD-binding domain, ferredoxin reductase-type APT56_22995 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site APT56_22995 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain APT56_22995 IPR017938 Riboflavin synthase-like beta-barrel APT56_22995 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain APT56_22995 IPR001433 Oxidoreductase FAD/NAD(P)-binding APT56_22995 IPR000951 Phthalate dioxygenase reductase APT56_22995 IPR039003 Carnitine monooxygenase reductase subunit APT56_22995 IPR036010 2Fe-2S ferredoxin-like superfamily APT56_22995 IPR012675 Beta-grasp domain superfamily APT56_23000 IPR012938 Glucose/Sorbosone dehydrogenase APT56_23000 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase APT56_23000 IPR011042 Six-bladed beta-propeller, TolB-like APT56_23005 IPR000923 Blue (type 1) copper domain APT56_23005 IPR028871 Blue (type 1) copper protein, binding site APT56_23005 IPR014068 Azurin APT56_23005 IPR008972 Cupredoxin APT56_23010 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase APT56_23010 IPR002347 Short-chain dehydrogenase/reductase SDR APT56_23010 IPR036291 NAD(P)-binding domain superfamily APT56_23010 IPR020904 Short-chain dehydrogenase/reductase, conserved site APT56_23025 IPR042100 Bordetella uptake gene, domain 1 APT56_23025 IPR005064 Bordetella uptake gene APT56_23030 IPR007400 PrpF protein APT56_23035 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_23035 IPR005119 LysR, substrate-binding APT56_23035 IPR036390 Winged helix DNA-binding domain superfamily APT56_23035 IPR000847 Transcription regulator HTH, LysR APT56_23040 IPR006464 N-acetyltransferase RimI/Ard1 APT56_23040 IPR016181 Acyl-CoA N-acyltransferase APT56_23040 IPR000182 GNAT domain APT56_23050 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site APT56_23050 IPR039425 RNA polymerase sigma-70 like APT56_23050 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 APT56_23050 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_23050 IPR013324 RNA polymerase sigma factor, region 3/4-like APT56_23050 IPR013325 RNA polymerase sigma factor, region 2 APT56_23050 IPR007627 RNA polymerase sigma-70 region 2 APT56_23050 IPR014284 RNA polymerase sigma-70 like domain APT56_23065 IPR036390 Winged helix DNA-binding domain superfamily APT56_23065 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_23065 IPR000524 Transcription regulator HTH, GntR APT56_23065 IPR008920 Transcription regulator FadR/GntR, C-terminal APT56_23065 IPR011711 GntR, C-terminal APT56_23070 IPR000089 Biotin/lipoyl attachment APT56_23070 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain APT56_23070 IPR005481 Biotin carboxylase-like, N-terminal domain APT56_23070 IPR011054 Rudiment single hybrid motif APT56_23070 IPR016185 Pre-ATP-grasp domain superfamily APT56_23070 IPR000089 Biotin/lipoyl attachment APT56_23070 IPR005482 Biotin carboxylase, C-terminal APT56_23070 IPR011764 Biotin carboxylation domain APT56_23070 IPR001882 Biotin-binding site APT56_23070 IPR016185 Pre-ATP-grasp domain superfamily APT56_23070 IPR011053 Single hybrid motif APT56_23070 IPR011054 Rudiment single hybrid motif APT56_23070 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain APT56_23070 IPR011764 Biotin carboxylation domain APT56_23070 IPR011053 Single hybrid motif APT56_23070 IPR001882 Biotin-binding site APT56_23070 IPR005481 Biotin carboxylase-like, N-terminal domain APT56_23070 IPR011761 ATP-grasp fold APT56_23070 IPR011761 ATP-grasp fold APT56_23070 IPR005482 Biotin carboxylase, C-terminal APT56_23075 IPR014085 Allophanate hydrolase APT56_23075 IPR023631 Amidase signature domain APT56_23075 IPR036928 Amidase signature (AS) superfamily APT56_23080 IPR000709 Leu/Ile/Val-binding protein APT56_23080 IPR028082 Periplasmic binding protein-like I APT56_23080 IPR039570 AmiC, periplasmic binding domain APT56_23085 IPR001851 ABC transporter, permease APT56_23095 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal APT56_23095 IPR003439 ABC transporter-like APT56_23095 IPR003593 AAA+ ATPase domain APT56_23095 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_23095 IPR017871 ABC transporter, conserved site APT56_23100 IPR003439 ABC transporter-like APT56_23100 IPR003593 AAA+ ATPase domain APT56_23100 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_23100 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein APT56_23100 IPR017871 ABC transporter, conserved site APT56_23110 IPR012910 TonB-dependent receptor, plug domain APT56_23110 IPR037066 TonB-dependent receptor, plug domain superfamily APT56_23110 IPR039423 TonB-dependent receptor-like APT56_23110 IPR010105 TonB-dependent siderophore receptor APT56_23110 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily APT56_23110 IPR000531 TonB-dependent receptor-like, beta-barrel APT56_23110 IPR010917 TonB-dependent receptor, conserved site APT56_23120 IPR036249 Thioredoxin-like superfamily APT56_23120 IPR006659 Arsenate reductase APT56_23120 IPR006660 Arsenate reductase-like APT56_23125 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APT56_23125 IPR033879 Undecaprenyl-diphosphatase APT56_23125 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily APT56_23130 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain APT56_23130 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily APT56_23130 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site APT56_23130 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain APT56_23130 IPR023546 Methylated-DNA--protein-cysteine methyltransferase APT56_23130 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding APT56_23130 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_23135 IPR018060 DNA binding HTH domain, AraC-type APT56_23135 IPR009057 Homeobox-like domain superfamily APT56_23135 IPR035451 Ada-like domain superfamily APT56_23135 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal APT56_23135 IPR003265 HhH-GPD domain APT56_23135 IPR011257 DNA glycosylase APT56_23135 IPR037046 DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily APT56_23135 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal APT56_23135 IPR004026 Ada DNA repair, metal-binding APT56_23135 IPR018062 HTH domain AraC-type, conserved site APT56_23140 IPR035570 UPF0234, N-terminal APT56_23140 IPR036183 YajQ-like superfamily APT56_23140 IPR035571 UPF0234-like, C-terminal APT56_23140 IPR007551 Protein of unknown function DUF520 APT56_23145 IPR003439 ABC transporter-like APT56_23145 IPR017871 ABC transporter, conserved site APT56_23145 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_23145 IPR003593 AAA+ ATPase domain APT56_23145 IPR015863 ABC transporter, hemin import, HmuV APT56_23150 IPR000522 ABC transporter, permease protein, BtuC-like APT56_23150 IPR037294 ABC transporter, BtuC-like APT56_23155 IPR002491 ABC transporter periplasmic binding domain APT56_23160 IPR007845 Haemin-degrading HemS/ChuX domain APT56_23170 IPR006860 FecR protein APT56_23170 IPR032623 FecR, N-terminal APT56_23170 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component APT56_23175 IPR007627 RNA polymerase sigma-70 region 2 APT56_23175 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site APT56_23175 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 APT56_23175 IPR013325 RNA polymerase sigma factor, region 2 APT56_23175 IPR014284 RNA polymerase sigma-70 like domain APT56_23175 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_23175 IPR013324 RNA polymerase sigma factor, region 3/4-like APT56_23175 IPR039425 RNA polymerase sigma-70 like APT56_23195 IPR005064 Bordetella uptake gene APT56_23195 IPR042100 Bordetella uptake gene, domain 1 APT56_23205 IPR001034 DeoR-type HTH domain APT56_23205 IPR013196 Helix-turn-helix, type 11 APT56_23205 IPR028349 Protein PafC APT56_23205 IPR036390 Winged helix DNA-binding domain superfamily APT56_23205 IPR026881 WYL domain APT56_23205 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_23220 IPR005119 LysR, substrate-binding APT56_23220 IPR000847 Transcription regulator HTH, LysR APT56_23220 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_23220 IPR036390 Winged helix DNA-binding domain superfamily APT56_23230 IPR000847 Transcription regulator HTH, LysR APT56_23230 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_23230 IPR036390 Winged helix DNA-binding domain superfamily APT56_23230 IPR005119 LysR, substrate-binding APT56_23235 IPR004840 Amino acid permease, conserved site APT56_23235 IPR004841 Amino acid permease/ SLC12A domain APT56_23240 IPR000192 Aminotransferase class V domain APT56_23240 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APT56_23240 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APT56_23240 IPR015424 Pyridoxal phosphate-dependent transferase APT56_23240 IPR010111 Kynureninase APT56_23245 IPR036390 Winged helix DNA-binding domain superfamily APT56_23245 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_23245 IPR019885 Transcription regulator HTH, AsnC-type, conserved site APT56_23245 IPR019888 Transcription regulator AsnC-type APT56_23245 IPR011991 ArsR-like helix-turn-helix domain APT56_23245 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain APT56_23245 IPR011008 Dimeric alpha-beta barrel APT56_23245 IPR000485 AsnC-type HTH domain APT56_23250 IPR005744 Hly-III APT56_23250 IPR004254 AdipoR/Haemolysin-III-related APT56_23255 IPR005321 Peptidase S58, DmpA APT56_23255 IPR016117 ArgJ-like domain superfamily APT56_23260 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APT56_23260 IPR018313 Solute-binding protein family 3, conserved site APT56_23265 IPR035906 MetI-like superfamily APT56_23265 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_23265 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain APT56_23270 IPR017871 ABC transporter, conserved site APT56_23270 IPR003439 ABC transporter-like APT56_23270 IPR003593 AAA+ ATPase domain APT56_23270 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_23270 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type APT56_23275 IPR011055 Duplicated hybrid motif APT56_23275 IPR016047 Peptidase M23 APT56_23275 IPR018392 LysM domain APT56_23275 IPR036779 LysM domain superfamily APT56_23295 IPR036249 Thioredoxin-like superfamily APT56_23295 IPR003782 Copper chaperone SCO1/SenC APT56_23310 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily APT56_23310 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain APT56_23310 IPR005467 Histidine kinase domain APT56_23310 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APT56_23310 IPR003594 Histidine kinase/HSP90-like ATPase APT56_23310 IPR004358 Signal transduction histidine kinase-related protein, C-terminal APT56_23315 IPR011006 CheY-like superfamily APT56_23315 IPR001789 Signal transduction response regulator, receiver domain APT56_23320 IPR008972 Cupredoxin APT56_23320 IPR002429 Cytochrome c oxidase subunit II-like C-terminal APT56_23320 IPR010514 COX aromatic rich motif APT56_23320 IPR034227 Ubiquinol oxidase subunit 2, cupredoxin domain APT56_23320 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain APT56_23320 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily APT56_23320 IPR006333 Cytochrome o ubiquinol oxidase subunit II APT56_23325 IPR014207 Cytochrome o ubiquinol oxidase, subunit I APT56_23325 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site APT56_23325 IPR000883 Cytochrome c oxidase subunit I APT56_23325 IPR036927 Cytochrome c oxidase-like, subunit I superfamily APT56_23325 IPR023616 Cytochrome c oxidase-like, subunit I domain APT56_23330 IPR014206 Cytochrome o ubiquinol oxidase, subunit III APT56_23330 IPR035973 Cytochrome c oxidase subunit III-like superfamily APT56_23330 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle APT56_23330 IPR024791 Cytochrome c oxidase subunit III APT56_23330 IPR033946 Ubiquinol oxidase subunit III domain APT56_23330 IPR000298 Cytochrome c oxidase subunit III-like APT56_23335 IPR014210 Cytochrome o ubiquinol oxidase subunit IV APT56_23335 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes APT56_23345 IPR006975 NifQ APT56_23355 IPR039426 Vitamin B12 transporter BtuB-like APT56_23355 IPR012910 TonB-dependent receptor, plug domain APT56_23355 IPR037066 TonB-dependent receptor, plug domain superfamily APT56_23355 IPR000531 TonB-dependent receptor-like, beta-barrel APT56_23355 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily APT56_23355 IPR010105 TonB-dependent siderophore receptor APT56_23360 IPR007236 SlyX APT56_23375 IPR012188 NAD(P)-dependent malic enzyme APT56_23375 IPR012302 Malic enzyme, NAD-binding APT56_23375 IPR037062 Malic enzyme, N-terminal domain superfamily APT56_23375 IPR012301 Malic enzyme, N-terminal domain APT56_23375 IPR015884 Malic enzyme, conserved site APT56_23375 IPR036291 NAD(P)-binding domain superfamily APT56_23375 IPR042113 Phosphate acetyltransferase, domain 1 APT56_23375 IPR042112 Phosphate acetyltransferase, domain 2 APT56_23375 IPR002505 Phosphate acetyl/butaryl transferase APT56_23390 IPR000620 EamA domain APT56_23410 IPR005119 LysR, substrate-binding APT56_23410 IPR000847 Transcription regulator HTH, LysR APT56_23410 IPR036390 Winged helix DNA-binding domain superfamily APT56_23410 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_23425 IPR036291 NAD(P)-binding domain superfamily APT56_23425 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase APT56_23425 IPR020904 Short-chain dehydrogenase/reductase, conserved site APT56_23425 IPR002347 Short-chain dehydrogenase/reductase SDR APT56_23435 IPR005119 LysR, substrate-binding APT56_23435 IPR000847 Transcription regulator HTH, LysR APT56_23435 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_23435 IPR036390 Winged helix DNA-binding domain superfamily APT56_23450 IPR000182 GNAT domain APT56_23450 IPR016181 Acyl-CoA N-acyltransferase APT56_23450 IPR023072 Acetyltransferase, YpeA APT56_23455 IPR036281 SinR repressor/SinI anti-repressor, dimerisation domain superfamily APT56_23455 IPR010981 SinR repressor/SinI anti-repressor, dimerisation domain APT56_23455 IPR010982 Lambda repressor-like, DNA-binding domain superfamily APT56_23455 IPR001387 Cro/C1-type helix-turn-helix domain APT56_23460 IPR030871 Cardiolipin synthase C APT56_23460 IPR025202 Phospholipase D-like domain APT56_23460 IPR001736 Phospholipase D/Transphosphatidylase APT56_23465 IPR018655 Protein of unknown function DUF2086 APT56_23470 IPR004574 Alkylated DNA repair protein AlkB APT56_23470 IPR005123 Oxoglutarate/iron-dependent dioxygenase APT56_23470 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily APT56_23470 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like APT56_23475 IPR016187 C-type lectin fold APT56_23475 IPR005532 Sulfatase-modifying factor enzyme APT56_23475 IPR042095 Sulfatase-modifying factor enzyme superfamily APT56_23490 IPR005708 Homogentisate 1,2-dioxygenase APT56_23490 IPR022950 Homogentisate 1,2-dioxygenase, bacterial APT56_23490 IPR011051 RmlC-like cupin domain superfamily APT56_23490 IPR014710 RmlC-like jelly roll fold APT56_23495 IPR003416 MgtC/SapB/SrpB/YhiD family APT56_23500 IPR036291 NAD(P)-binding domain superfamily APT56_23500 IPR020904 Short-chain dehydrogenase/reductase, conserved site APT56_23500 IPR002347 Short-chain dehydrogenase/reductase SDR APT56_23505 IPR023198 Phosphoglycolate phosphatase-like, domain 2 APT56_23505 IPR023214 HAD superfamily APT56_23505 IPR041492 Haloacid dehalogenase-like hydrolase APT56_23505 IPR006439 HAD hydrolase, subfamily IA APT56_23505 IPR036412 HAD-like superfamily APT56_23510 IPR011257 DNA glycosylase APT56_23510 IPR003265 HhH-GPD domain APT56_23515 IPR018655 Protein of unknown function DUF2086 APT56_23520 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain APT56_23520 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 APT56_23520 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel APT56_23520 IPR006249 Aconitase/Iron-responsive element-binding protein 2 APT56_23520 IPR036008 Aconitase, iron-sulfur domain APT56_23520 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain APT56_23520 IPR018136 Aconitase family, 4Fe-4S cluster binding site APT56_23530 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily APT56_23530 IPR012910 TonB-dependent receptor, plug domain APT56_23530 IPR037066 TonB-dependent receptor, plug domain superfamily APT56_23530 IPR011662 Secretin/TonB, short N-terminal domain APT56_23530 IPR039423 TonB-dependent receptor-like APT56_23530 IPR010917 TonB-dependent receptor, conserved site APT56_23530 IPR000531 TonB-dependent receptor-like, beta-barrel APT56_23530 IPR010105 TonB-dependent siderophore receptor APT56_23535 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component APT56_23535 IPR032623 FecR, N-terminal APT56_23535 IPR006860 FecR protein APT56_23550 IPR004796 Phosphotransferase system, cellobiose-type IIC component APT56_23550 IPR003352 Phosphotransferase system, EIIC APT56_23550 IPR004501 Phosphotransferase system, EIIC component, type 3 APT56_23555 IPR010200 HflC APT56_23555 IPR001107 Band 7 domain APT56_23555 IPR036013 Band 7/SPFH domain superfamily APT56_23570 IPR032475 Protealysin, N-terminal propeptide APT56_23570 IPR013856 Peptidase M4 domain APT56_23570 IPR001570 Peptidase M4, C-terminal APT56_23570 IPR023612 Peptidase M4 APT56_23570 IPR027268 Peptidase M4/M1, CTD superfamily APT56_23580 IPR004747 Cyanate transport system protein APT56_23580 IPR011701 Major facilitator superfamily APT56_23580 IPR020846 Major facilitator superfamily domain APT56_23580 IPR036259 MFS transporter superfamily APT56_23585 IPR018062 HTH domain AraC-type, conserved site APT56_23585 IPR009057 Homeobox-like domain superfamily APT56_23585 IPR018060 DNA binding HTH domain, AraC-type APT56_23585 IPR014710 RmlC-like jelly roll fold APT56_23585 IPR011051 RmlC-like cupin domain superfamily APT56_23585 IPR003313 AraC-type arabinose-binding/dimerisation domain APT56_23590 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT56_23590 IPR023506 Trans-aconitate 2-methyltransferase APT56_23590 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal APT56_23600 IPR005496 Integral membrane protein TerC APT56_23600 IPR022369 Integral membrane protein TerC, riboswitch-linked APT56_23605 IPR036390 Winged helix DNA-binding domain superfamily APT56_23605 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_23605 IPR000847 Transcription regulator HTH, LysR APT56_23605 IPR005119 LysR, substrate-binding APT56_23635 IPR023801 Histone deacetylase domain APT56_23635 IPR023696 Ureohydrolase domain superfamily APT56_23635 IPR000286 Histone deacetylase family APT56_23635 IPR037138 Histone deacetylase domain superfamily APT56_23645 IPR004736 MFS transporter, metabolite:H symporter APT56_23645 IPR005828 Major facilitator, sugar transporter-like APT56_23645 IPR011701 Major facilitator superfamily APT56_23645 IPR020846 Major facilitator superfamily domain APT56_23645 IPR005829 Sugar transporter, conserved site APT56_23645 IPR036259 MFS transporter superfamily APT56_23650 IPR008972 Cupredoxin APT56_23650 IPR034227 Ubiquinol oxidase subunit 2, cupredoxin domain APT56_23650 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain APT56_23650 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily APT56_23650 IPR006333 Cytochrome o ubiquinol oxidase subunit II APT56_23650 IPR002429 Cytochrome c oxidase subunit II-like C-terminal APT56_23650 IPR010514 COX aromatic rich motif APT56_23655 IPR014207 Cytochrome o ubiquinol oxidase, subunit I APT56_23655 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site APT56_23655 IPR036927 Cytochrome c oxidase-like, subunit I superfamily APT56_23655 IPR023616 Cytochrome c oxidase-like, subunit I domain APT56_23655 IPR000883 Cytochrome c oxidase subunit I APT56_23660 IPR035973 Cytochrome c oxidase subunit III-like superfamily APT56_23660 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle APT56_23660 IPR024791 Cytochrome c oxidase subunit III APT56_23660 IPR000298 Cytochrome c oxidase subunit III-like APT56_23660 IPR033946 Ubiquinol oxidase subunit III domain APT56_23660 IPR014206 Cytochrome o ubiquinol oxidase, subunit III APT56_23665 IPR014210 Cytochrome o ubiquinol oxidase subunit IV APT56_23665 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes APT56_23675 IPR023614 Porin domain superfamily APT56_23675 IPR033900 Porin domain, Gram-negative type APT56_23675 IPR001702 Porin, Gram-negative type APT56_23675 IPR002299 Porin, Neisseria sp. type APT56_23680 IPR002299 Porin, Neisseria sp. type APT56_23680 IPR001702 Porin, Gram-negative type APT56_23680 IPR023614 Porin domain superfamily APT56_23680 IPR033900 Porin domain, Gram-negative type APT56_23690 IPR011701 Major facilitator superfamily APT56_23690 IPR020846 Major facilitator superfamily domain APT56_23690 IPR004734 Multidrug resistance protein APT56_23690 IPR036259 MFS transporter superfamily APT56_23700 IPR010987 Glutathione S-transferase, C-terminal-like APT56_23700 IPR040079 Glutathione Transferase family APT56_23700 IPR004045 Glutathione S-transferase, N-terminal APT56_23700 IPR036282 Glutathione S-transferase, C-terminal domain superfamily APT56_23700 IPR036249 Thioredoxin-like superfamily APT56_23725 IPR016032 Signal transduction response regulator, C-terminal effector APT56_23725 IPR000792 Transcription regulator LuxR, C-terminal APT56_23725 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_23735 IPR006311 Twin-arginine translocation pathway, signal sequence APT56_23735 IPR008475 Bacterial phospholipase C, C-terminal domain APT56_23735 IPR017850 Alkaline-phosphatase-like, core domain superfamily APT56_23735 IPR007312 Phosphoesterase APT56_23735 IPR017767 Bacterial phospholipase C, phosphocholine-specific APT56_23750 IPR005561 ANTAR domain APT56_23750 IPR013587 Nitrate/nitrite sensing protein APT56_23750 IPR010910 Nitrate/nitrite sensing protein, bacterial APT56_23750 IPR011006 CheY-like superfamily APT56_23750 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_23755 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain APT56_23755 IPR023753 FAD/NAD(P)-binding domain APT56_23755 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily APT56_23755 IPR012748 Rieske-like [2Fe-2S] domain, NirD-type APT56_23755 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal APT56_23755 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily APT56_23755 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily APT56_23755 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site APT56_23755 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain APT56_23755 IPR007419 BFD-like [2Fe-2S]-binding domain APT56_23755 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB APT56_23755 IPR036188 FAD/NAD(P)-binding domain superfamily APT56_23760 IPR012748 Rieske-like [2Fe-2S] domain, NirD-type APT56_23760 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily APT56_23760 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal APT56_23760 IPR007419 BFD-like [2Fe-2S]-binding domain APT56_23760 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site APT56_23760 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain APT56_23760 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB APT56_23760 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily APT56_23760 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain APT56_23760 IPR023753 FAD/NAD(P)-binding domain APT56_23760 IPR036188 FAD/NAD(P)-binding domain superfamily APT56_23760 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily APT56_23765 IPR009010 Aspartate decarboxylase-like domain superfamily APT56_23765 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain APT56_23765 IPR006656 Molybdopterin oxidoreductase APT56_23765 IPR006657 Molybdopterin dinucleotide-binding domain APT56_23765 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site APT56_23765 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site APT56_23765 IPR041957 Nitrate reductase NapA-like, molybdopterin-binding domain APT56_23770 IPR020471 Aldo/keto reductase APT56_23770 IPR023210 NADP-dependent oxidoreductase domain APT56_23770 IPR036812 NADP-dependent oxidoreductase domain superfamily APT56_23775 IPR023210 NADP-dependent oxidoreductase domain APT56_23775 IPR036812 NADP-dependent oxidoreductase domain superfamily APT56_23775 IPR020471 Aldo/keto reductase APT56_23775 IPR018170 Aldo/keto reductase, conserved site APT56_23780 IPR036390 Winged helix DNA-binding domain superfamily APT56_23780 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_23780 IPR000847 Transcription regulator HTH, LysR APT56_23780 IPR005119 LysR, substrate-binding APT56_23785 IPR005872 Archaeal/bacterial translation initiation factor SUI1 APT56_23785 IPR036877 SUI1 domain superfamily APT56_23785 IPR001950 SUI1 domain APT56_23805 IPR002823 Protein of unknown function DUF112, transmembrane APT56_23815 IPR003660 HAMP domain APT56_23815 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site APT56_23815 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain APT56_23815 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding APT56_23815 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily APT56_23815 IPR004090 Chemotaxis methyl-accepting receptor APT56_23820 IPR029787 Nucleotide cyclase APT56_23820 IPR003018 GAF domain APT56_23820 IPR000160 GGDEF domain APT56_23820 IPR029016 GAF-like domain superfamily APT56_23825 IPR036390 Winged helix DNA-binding domain superfamily APT56_23825 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_23825 IPR001845 HTH ArsR-type DNA-binding domain APT56_23825 IPR011991 ArsR-like helix-turn-helix domain APT56_23835 IPR029045 ClpP/crotonase-like domain superfamily APT56_23835 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA APT56_23835 IPR033135 ClpP, histidine active site APT56_23835 IPR001907 ATP-dependent Clp protease proteolytic subunit APT56_23840 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG APT56_23840 IPR036259 MFS transporter superfamily APT56_23840 IPR020846 Major facilitator superfamily domain APT56_23840 IPR011701 Major facilitator superfamily APT56_23840 IPR023692 Multidrug resistance protein MdtG APT56_23850 IPR036259 MFS transporter superfamily APT56_23850 IPR005829 Sugar transporter, conserved site APT56_23850 IPR011701 Major facilitator superfamily APT56_23850 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG APT56_23850 IPR020846 Major facilitator superfamily domain APT56_23855 IPR005064 Bordetella uptake gene APT56_23855 IPR042100 Bordetella uptake gene, domain 1 APT56_23860 IPR013785 Aldolase-type TIM barrel APT56_23860 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA APT56_23860 IPR002220 DapA-like APT56_23860 IPR020624 Schiff base-forming aldolase, conserved site APT56_23860 IPR020625 Schiff base-forming aldolase, active site APT56_23865 IPR006656 Molybdopterin oxidoreductase APT56_23865 IPR009010 Aspartate decarboxylase-like domain superfamily APT56_23865 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase APT56_23865 IPR006657 Molybdopterin dinucleotide-binding domain APT56_23865 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site APT56_23870 IPR000073 Alpha/beta hydrolase fold-1 APT56_23870 IPR029058 Alpha/Beta hydrolase fold APT56_23875 IPR000182 GNAT domain APT56_23875 IPR016181 Acyl-CoA N-acyltransferase APT56_23880 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding APT56_23880 IPR013328 6-phosphogluconate dehydrogenase, domain 2 APT56_23880 IPR015815 3-hydroxyisobutyrate dehydrogenase-related APT56_23880 IPR036291 NAD(P)-binding domain superfamily APT56_23880 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain APT56_23880 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily APT56_23880 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site APT56_23890 IPR036409 Class II aldolase/adducin N-terminal domain superfamily APT56_23890 IPR001303 Class II aldolase/adducin N-terminal APT56_23915 IPR000399 TPP-binding enzyme, conserved site APT56_23915 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding APT56_23915 IPR029061 Thiamin diphosphate-binding fold APT56_23915 IPR029035 DHS-like NAD/FAD-binding domain superfamily APT56_23915 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain APT56_23915 IPR012000 Thiamine pyrophosphate enzyme, central domain APT56_23935 IPR023500 Zinc transporter ZitB APT56_23935 IPR002524 Cation efflux protein APT56_23935 IPR036837 Cation efflux protein, cytoplasmic domain superfamily APT56_23935 IPR027469 Cation efflux transmembrane domain superfamily APT56_23940 IPR038390 Metal-sensitive transcriptional repressor superfamily APT56_23940 IPR003735 Metal-sensitive transcriptional repressor APT56_23950 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_23950 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain APT56_23950 IPR013113 FAD-binding 9, siderophore-interacting APT56_23950 IPR003439 ABC transporter-like APT56_23950 IPR007037 Siderophore-interacting protein, C-terminal domain APT56_23950 IPR036640 ABC transporter type 1, transmembrane domain superfamily APT56_23950 IPR011527 ABC transporter type 1, transmembrane domain APT56_23950 IPR003593 AAA+ ATPase domain APT56_23950 IPR017938 Riboflavin synthase-like beta-barrel APT56_23950 IPR017927 FAD-binding domain, ferredoxin reductase-type APT56_23950 IPR017871 ABC transporter, conserved site APT56_23955 IPR007037 Siderophore-interacting protein, C-terminal domain APT56_23955 IPR036640 ABC transporter type 1, transmembrane domain superfamily APT56_23955 IPR011527 ABC transporter type 1, transmembrane domain APT56_23955 IPR003593 AAA+ ATPase domain APT56_23955 IPR013113 FAD-binding 9, siderophore-interacting APT56_23955 IPR017927 FAD-binding domain, ferredoxin reductase-type APT56_23955 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain APT56_23955 IPR003439 ABC transporter-like APT56_23955 IPR017871 ABC transporter, conserved site APT56_23955 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_23955 IPR017938 Riboflavin synthase-like beta-barrel APT56_23965 IPR003593 AAA+ ATPase domain APT56_23965 IPR001650 Helicase, C-terminal APT56_23965 IPR014001 Helicase superfamily 1/2, ATP-binding domain APT56_23965 IPR011545 DEAD/DEAH box helicase domain APT56_23965 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_23965 IPR013701 DEAD/H associated APT56_23970 IPR016059 DNA ligase, ATP-dependent, conserved site APT56_23970 IPR000977 DNA ligase, ATP-dependent APT56_23970 IPR012309 DNA ligase, ATP-dependent, C-terminal APT56_23970 IPR022865 DNA ligase, ATP-dependent, bacterial/archaeal APT56_23970 IPR036599 DNA ligase, ATP-dependent, N-terminal domain superfamily APT56_23970 IPR012308 DNA ligase, ATP-dependent, N-terminal APT56_23970 IPR012340 Nucleic acid-binding, OB-fold APT56_23970 IPR012310 DNA ligase, ATP-dependent, central APT56_23985 IPR038770 Sodium/solute symporter superfamily APT56_23985 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 APT56_23985 IPR004706 Arsenical-resistance protein Acr3 APT56_23990 IPR036249 Thioredoxin-like superfamily APT56_23990 IPR006660 Arsenate reductase-like APT56_23990 IPR006659 Arsenate reductase APT56_23995 IPR029039 Flavoprotein-like superfamily APT56_23995 IPR005025 NADPH-dependent FMN reductase-like APT56_23995 IPR014063 Arsenate resistance ArsH APT56_24000 IPR033954 Disulphide bond isomerase, DsbC/G APT56_24000 IPR012336 Thioredoxin-like fold APT56_24000 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily APT56_24000 IPR036249 Thioredoxin-like superfamily APT56_24010 IPR000620 EamA domain APT56_24030 IPR023506 Trans-aconitate 2-methyltransferase APT56_24030 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT56_24030 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal APT56_24045 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT56_24045 IPR003333 Mycolic acid cyclopropane synthase APT56_24085 IPR001789 Signal transduction response regulator, receiver domain APT56_24085 IPR039420 Transcriptional regulatory protein WalR-like APT56_24085 IPR011006 CheY-like superfamily APT56_24085 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_24085 IPR001867 OmpR/PhoB-type DNA-binding domain APT56_24090 IPR004358 Signal transduction histidine kinase-related protein, C-terminal APT56_24090 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain APT56_24090 IPR019247 Histidine kinase BarA, N-terminal APT56_24090 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily APT56_24090 IPR001789 Signal transduction response regulator, receiver domain APT56_24090 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain APT56_24090 IPR005467 Histidine kinase domain APT56_24090 IPR036641 HPT domain superfamily APT56_24090 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APT56_24090 IPR003660 HAMP domain APT56_24090 IPR011006 CheY-like superfamily APT56_24090 IPR003594 Histidine kinase/HSP90-like ATPase APT56_24095 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT56_24095 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal APT56_24095 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal APT56_24095 IPR000780 MCP methyltransferase, CheR-type APT56_24100 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase APT56_24100 IPR035909 Methylesterase CheB, C-terminal APT56_24105 IPR003018 GAF domain APT56_24105 IPR003594 Histidine kinase/HSP90-like ATPase APT56_24105 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APT56_24105 IPR005467 Histidine kinase domain APT56_24105 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain APT56_24105 IPR035965 PAS domain superfamily APT56_24105 IPR013654 PAS fold-2 APT56_24105 IPR016132 Phytochrome chromophore attachment domain APT56_24105 IPR001294 Phytochrome APT56_24105 IPR013515 Phytochrome, central region APT56_24105 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily APT56_24105 IPR029016 GAF-like domain superfamily APT56_24120 IPR029045 ClpP/crotonase-like domain superfamily APT56_24120 IPR001478 PDZ domain APT56_24120 IPR005151 Tail specific protease APT56_24120 IPR036034 PDZ superfamily APT56_24120 IPR004447 C-terminal-processing peptidase S41A APT56_24155 IPR029062 Class I glutamine amidotransferase-like APT56_24155 IPR002818 DJ-1/PfpI APT56_24165 IPR036046 Acylphosphatase-like domain superfamily APT56_24165 IPR035919 EAL domain superfamily APT56_24165 IPR001633 EAL domain APT56_24165 IPR007024 BLUF domain APT56_24170 IPR011701 Major facilitator superfamily APT56_24170 IPR036259 MFS transporter superfamily APT56_24170 IPR020846 Major facilitator superfamily domain APT56_24185 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_24185 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 APT56_24185 IPR025944 Sigma-54 interaction domain, conserved site APT56_24185 IPR001789 Signal transduction response regulator, receiver domain APT56_24185 IPR002078 RNA polymerase sigma factor 54 interaction domain APT56_24185 IPR002197 DNA binding HTH domain, Fis-type APT56_24185 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 APT56_24185 IPR003593 AAA+ ATPase domain APT56_24185 IPR011006 CheY-like superfamily APT56_24185 IPR009057 Homeobox-like domain superfamily APT56_24190 IPR029151 Periplasmic sensor-like domain superfamily APT56_24190 IPR004358 Signal transduction histidine kinase-related protein, C-terminal APT56_24190 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain APT56_24190 IPR003594 Histidine kinase/HSP90-like ATPase APT56_24190 IPR005467 Histidine kinase domain APT56_24190 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily APT56_24190 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APT56_24200 IPR000847 Transcription regulator HTH, LysR APT56_24200 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_24200 IPR036390 Winged helix DNA-binding domain superfamily APT56_24200 IPR005119 LysR, substrate-binding APT56_24205 IPR002347 Short-chain dehydrogenase/reductase SDR APT56_24205 IPR036291 NAD(P)-binding domain superfamily APT56_24215 IPR002137 Beta-lactamase, class-D active site APT56_24215 IPR012338 Beta-lactamase/transpeptidase-like APT56_24215 IPR001460 Penicillin-binding protein, transpeptidase APT56_24220 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal APT56_24220 IPR012338 Beta-lactamase/transpeptidase-like APT56_24220 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A APT56_24260 IPR020818 GroES chaperonin family APT56_24260 IPR037124 GroES chaperonin superfamily APT56_24260 IPR018369 Chaperonin GroES, conserved site APT56_24260 IPR011032 GroES-like superfamily APT56_24265 IPR027410 TCP-1-like chaperonin intermediate domain superfamily APT56_24265 IPR027409 GroEL-like apical domain superfamily APT56_24265 IPR002423 Chaperonin Cpn60/TCP-1 family APT56_24265 IPR001844 Chaperonin Cpn60 APT56_24265 IPR018370 Chaperonin Cpn60, conserved site APT56_24265 IPR027413 GroEL-like equatorial domain superfamily APT56_24275 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_24275 IPR036390 Winged helix DNA-binding domain superfamily APT56_24275 IPR000835 MarR-type HTH domain APT56_24275 IPR023187 Transcriptional regulator MarR-type, conserved site APT56_24280 IPR016161 Aldehyde/histidinol dehydrogenase APT56_24280 IPR016163 Aldehyde dehydrogenase, C-terminal APT56_24280 IPR016162 Aldehyde dehydrogenase, N-terminal APT56_24280 IPR016160 Aldehyde dehydrogenase, cysteine active site APT56_24280 IPR015590 Aldehyde dehydrogenase domain APT56_24280 IPR029510 Aldehyde dehydrogenase, glutamic acid active site APT56_24280 IPR017628 2-hydroxymuconic semialdehyde dehydrogenase APT56_24285 IPR035959 RutC-like superfamily APT56_24285 IPR006175 YjgF/YER057c/UK114 family APT56_24290 IPR005119 LysR, substrate-binding APT56_24290 IPR036390 Winged helix DNA-binding domain superfamily APT56_24290 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_24290 IPR000847 Transcription regulator HTH, LysR APT56_24295 IPR011051 RmlC-like cupin domain superfamily APT56_24295 IPR014710 RmlC-like jelly roll fold APT56_24295 IPR010329 3-hydroxyanthranilic acid dioxygenase APT56_24320 IPR017871 ABC transporter, conserved site APT56_24320 IPR003593 AAA+ ATPase domain APT56_24320 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_24320 IPR003439 ABC transporter-like APT56_24320 IPR030921 LPS export ABC transporter, ATP-binding protein LptB APT56_24320 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal APT56_24325 IPR003593 AAA+ ATPase domain APT56_24325 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein APT56_24325 IPR003439 ABC transporter-like APT56_24325 IPR017871 ABC transporter, conserved site APT56_24325 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_24330 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily APT56_24330 IPR013328 6-phosphogluconate dehydrogenase, domain 2 APT56_24330 IPR036291 NAD(P)-binding domain superfamily APT56_24330 IPR013131 Mannitol dehydrogenase, N-terminal APT56_24330 IPR000669 Mannitol dehydrogenase APT56_24330 IPR023027 Mannitol dehydrogenase, conserved site APT56_24330 IPR013118 Mannitol dehydrogenase, C-terminal APT56_24335 IPR036945 Diacylglycerol kinase (DAGK) superfamily APT56_24335 IPR033718 Diacylglycerol kinase, prokaryotic APT56_24335 IPR000829 DAGK family APT56_24340 IPR023753 FAD/NAD(P)-binding domain APT56_24340 IPR036188 FAD/NAD(P)-binding domain superfamily APT56_24345 IPR011060 Ribulose-phosphate binding barrel APT56_24345 IPR001754 Orotidine 5'-phosphate decarboxylase domain APT56_24345 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 APT56_24345 IPR018089 Orotidine 5'-phosphate decarboxylase, active site APT56_24345 IPR013785 Aldolase-type TIM barrel APT56_24350 IPR008136 CinA, C-terminal APT56_24350 IPR036653 CinA-like, C-terminal APT56_24355 IPR007686 YutG/PgpA domain APT56_24355 IPR026037 Phosphatidylglycerophosphatase A APT56_24355 IPR036681 PgpA-like superfamily APT56_24360 IPR036921 PurM-like, N-terminal domain superfamily APT56_24360 IPR036676 PurM-like, C-terminal domain superfamily APT56_24360 IPR006283 Thiamine-monophosphate kinase APT56_24360 IPR010918 PurM-like, C-terminal domain APT56_24360 IPR016188 PurM-like, N-terminal domain APT56_24365 IPR035926 NusB-like superfamily APT56_24365 IPR011605 NusB antitermination factor APT56_24365 IPR006027 NusB/RsmB/TIM44 APT56_24370 IPR034964 Lumazine synthase APT56_24370 IPR036467 Lumazine/riboflavin synthase superfamily APT56_24370 IPR002180 Lumazine/riboflavin synthase APT56_24375 IPR032677 GTP cyclohydrolase II APT56_24375 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB APT56_24375 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily APT56_24375 IPR036144 RibA-like superfamily APT56_24395 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_24395 IPR017871 ABC transporter, conserved site APT56_24395 IPR012693 ABC transporter, phosphonate import, PhnC APT56_24395 IPR003439 ABC transporter-like APT56_24395 IPR003593 AAA+ ATPase domain APT56_24400 IPR005769 ABC transporter, permease PhnE/PtxC APT56_24400 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_24400 IPR035906 MetI-like superfamily APT56_24405 IPR035906 MetI-like superfamily APT56_24405 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_24405 IPR005769 ABC transporter, permease PhnE/PtxC APT56_24415 IPR003593 AAA+ ATPase domain APT56_24415 IPR004390 Signal-recognition particle receptor FtsY APT56_24415 IPR013822 Signal recognition particle SRP54, helical bundle APT56_24415 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_24415 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily APT56_24415 IPR036225 SRP/SRP receptor, N-terminal APT56_24415 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain APT56_24420 IPR002052 DNA methylase, N-6 adenine-specific, conserved site APT56_24420 IPR004398 RNA methyltransferase, RsmD APT56_24420 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT56_24425 IPR001980 Phosphopantetheine adenylyltransferase APT56_24425 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT56_24425 IPR004821 Cytidyltransferase-like domain APT56_24430 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APT56_24430 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APT56_24435 IPR004711 Benzoate transporter APT56_24450 IPR020846 Major facilitator superfamily domain APT56_24450 IPR011701 Major facilitator superfamily APT56_24450 IPR004638 Drug resistance transporter EmrB-like APT56_24450 IPR036259 MFS transporter superfamily APT56_24470 IPR010917 TonB-dependent receptor, conserved site APT56_24470 IPR037066 TonB-dependent receptor, plug domain superfamily APT56_24470 IPR011662 Secretin/TonB, short N-terminal domain APT56_24470 IPR039423 TonB-dependent receptor-like APT56_24470 IPR000531 TonB-dependent receptor-like, beta-barrel APT56_24470 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily APT56_24470 IPR010105 TonB-dependent siderophore receptor APT56_24470 IPR012910 TonB-dependent receptor, plug domain APT56_24475 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_24475 IPR004095 TGS APT56_24475 IPR012675 Beta-grasp domain superfamily APT56_24475 IPR031167 OBG-type guanine nucleotide-binding (G) domain APT56_24475 IPR006073 GTP binding domain APT56_24475 IPR023192 TGS-like domain superfamily APT56_24475 IPR041706 YchF, N-terminal APT56_24475 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 APT56_24475 IPR013029 YchF, C-terminal domain APT56_24475 IPR012676 TGS-like APT56_24485 IPR036416 Peptidyl-tRNA hydrolase superfamily APT56_24485 IPR001328 Peptidyl-tRNA hydrolase APT56_24485 IPR018171 Peptidyl-tRNA hydrolase, conserved site APT56_24490 IPR001021 Ribosomal protein L25, long-form APT56_24490 IPR020055 Ribosomal protein L25, short-form APT56_24490 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily APT56_24490 IPR029751 Ribosomal protein L25 APT56_24490 IPR020057 Ribosomal protein L25, beta domain APT56_24490 IPR037121 Ribosomal protein L25, C-terminal APT56_24490 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal APT56_24495 IPR005946 Ribose-phosphate pyrophosphokinase APT56_24495 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site APT56_24495 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type APT56_24495 IPR029057 Phosphoribosyltransferase-like APT56_24495 IPR000836 Phosphoribosyltransferase domain APT56_24495 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain APT56_24505 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APT56_24505 IPR013750 GHMP kinase, C-terminal domain APT56_24505 IPR020568 Ribosomal protein S5 domain 2-type fold APT56_24505 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase APT56_24505 IPR036554 GHMP kinase, C-terminal domain superfamily APT56_24505 IPR006204 GHMP kinase N-terminal domain APT56_24510 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding APT56_24510 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain APT56_24510 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily APT56_24510 IPR004090 Chemotaxis methyl-accepting receptor APT56_24510 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site APT56_24510 IPR003660 HAMP domain APT56_24515 IPR029046 Lipoprotein localisation LolA/LolB/LppX APT56_24515 IPR004565 Outer membrane lipoprotein LolB APT56_24520 IPR011990 Tetratricopeptide-like helical domain superfamily APT56_24520 IPR013026 Tetratricopeptide repeat-containing domain APT56_24520 IPR019734 Tetratricopeptide repeat APT56_24525 IPR010663 Zinc finger, FPG/IleRS-type APT56_24525 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site APT56_24525 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type APT56_24525 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding APT56_24525 IPR010979 Ribosomal protein S13-like, H2TH APT56_24525 IPR035937 MutM-like, N-terminal APT56_24525 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain APT56_24525 IPR020629 Formamidopyrimidine-DNA glycosylase APT56_24535 IPR002938 FAD-binding domain APT56_24535 IPR036188 FAD/NAD(P)-binding domain superfamily APT56_24545 IPR000847 Transcription regulator HTH, LysR APT56_24545 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_24545 IPR036390 Winged helix DNA-binding domain superfamily APT56_24545 IPR005119 LysR, substrate-binding APT56_24550 IPR022950 Homogentisate 1,2-dioxygenase, bacterial APT56_24550 IPR011051 RmlC-like cupin domain superfamily APT56_24550 IPR014710 RmlC-like jelly roll fold APT56_24550 IPR005708 Homogentisate 1,2-dioxygenase APT56_24560 IPR002123 Phospholipid/glycerol acyltransferase APT56_24565 IPR012160 Lipoteichoic acid synthase-like APT56_24565 IPR017850 Alkaline-phosphatase-like, core domain superfamily APT56_24565 IPR000917 Sulfatase, N-terminal APT56_24570 IPR008920 Transcription regulator FadR/GntR, C-terminal APT56_24570 IPR011711 GntR, C-terminal APT56_24570 IPR000524 Transcription regulator HTH, GntR APT56_24570 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_24570 IPR036390 Winged helix DNA-binding domain superfamily APT56_24575 IPR001509 NAD-dependent epimerase/dehydratase APT56_24575 IPR036291 NAD(P)-binding domain superfamily APT56_24580 IPR011042 Six-bladed beta-propeller, TolB-like APT56_24580 IPR005511 Senescence marker protein-30 (SMP-30) APT56_24580 IPR013658 SMP-30/Gluconolactonase/LRE-like region APT56_24585 IPR004682 TRAP transporter solute receptor, DctP family APT56_24585 IPR018389 TRAP transporter solute receptor DctP/TeaA APT56_24585 IPR038404 TRAP transporter solute receptor DctP superfamily APT56_24595 IPR004681 TRAP transporter large membrane protein DctM APT56_24595 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit APT56_24605 IPR004358 Signal transduction histidine kinase-related protein, C-terminal APT56_24605 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APT56_24605 IPR003594 Histidine kinase/HSP90-like ATPase APT56_24605 IPR005467 Histidine kinase domain APT56_24605 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain APT56_24605 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily APT56_24605 IPR003660 HAMP domain APT56_24610 IPR011006 CheY-like superfamily APT56_24610 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_24610 IPR001867 OmpR/PhoB-type DNA-binding domain APT56_24610 IPR001789 Signal transduction response regulator, receiver domain APT56_24610 IPR039420 Transcriptional regulatory protein WalR-like APT56_24615 IPR016166 FAD-binding domain, PCMH-type APT56_24615 IPR036318 FAD-binding, type PCMH-like superfamily APT56_24615 IPR016164 FAD-linked oxidase-like, C-terminal APT56_24615 IPR004113 FAD-linked oxidase, C-terminal APT56_24615 IPR004490 Glycolate oxidase subunit GlcD APT56_24615 IPR006094 FAD linked oxidase, N-terminal APT56_24615 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 APT56_24625 IPR005841 Alpha-D-phosphohexomutase superfamily APT56_24625 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily APT56_24625 IPR016066 Alpha-D-phosphohexomutase, conserved site APT56_24625 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II APT56_24625 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III APT56_24625 IPR005843 Alpha-D-phosphohexomutase, C-terminal APT56_24625 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III APT56_24625 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I APT56_24630 IPR035482 Phosphoglucose isomerase, SIS domain 2 APT56_24630 IPR023096 Phosphoglucose isomerase, C-terminal APT56_24630 IPR001672 Phosphoglucose isomerase (PGI) APT56_24630 IPR035476 Phosphoglucose isomerase, SIS domain 1 APT56_24630 IPR018189 Phosphoglucose isomerase, conserved site APT56_24635 IPR000101 Gamma-glutamyltranspeptidase APT56_24635 IPR029055 Nucleophile aminohydrolases, N-terminal APT56_24645 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain APT56_24645 IPR001296 Glycosyl transferase, family 1 APT56_24650 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain APT56_24650 IPR001296 Glycosyl transferase, family 1 APT56_24655 IPR029055 Nucleophile aminohydrolases, N-terminal APT56_24655 IPR017932 Glutamine amidotransferase type 2 domain APT56_24655 IPR033738 Asparagine synthase, N-terminal domain APT56_24655 IPR001962 Asparagine synthase APT56_24655 IPR006426 Asparagine synthase, glutamine-hydrolyzing APT56_24660 IPR001296 Glycosyl transferase, family 1 APT56_24660 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain APT56_24665 IPR004268 Peptidoglycan biosynthesis protein MurJ APT56_24670 IPR001509 NAD-dependent epimerase/dehydratase APT56_24670 IPR036291 NAD(P)-binding domain superfamily APT56_24675 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation APT56_24675 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase APT56_24675 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal APT56_24675 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily APT56_24675 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily APT56_24675 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal APT56_24675 IPR017476 UDP-glucose/GDP-mannose dehydrogenase APT56_24675 IPR036291 NAD(P)-binding domain superfamily APT56_24680 IPR000715 Glycosyl transferase, family 4 APT56_24685 IPR011566 Ubiquinone biosynthesis protein Coq7 APT56_24685 IPR012347 Ferritin-like APT56_24685 IPR009078 Ferritin-like superfamily APT56_24695 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain APT56_24695 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily APT56_24695 IPR020940 Thymidylate synthase, active site APT56_24695 IPR000398 Thymidylate synthase APT56_24700 IPR000160 GGDEF domain APT56_24700 IPR005330 MHYT domain APT56_24700 IPR029787 Nucleotide cyclase APT56_24700 IPR035919 EAL domain superfamily APT56_24700 IPR001633 EAL domain APT56_24705 IPR017925 Dihydrofolate reductase conserved site APT56_24705 IPR024072 Dihydrofolate reductase-like domain superfamily APT56_24705 IPR012259 Dihydrofolate reductase APT56_24705 IPR001796 Dihydrofolate reductase domain APT56_24710 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APT56_24710 IPR004839 Aminotransferase, class I/classII APT56_24710 IPR015424 Pyridoxal phosphate-dependent transferase APT56_24710 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APT56_24715 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APT56_24715 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APT56_24715 IPR015424 Pyridoxal phosphate-dependent transferase APT56_24715 IPR005814 Aminotransferase class-III APT56_24720 IPR016160 Aldehyde dehydrogenase, cysteine active site APT56_24720 IPR016163 Aldehyde dehydrogenase, C-terminal APT56_24720 IPR016161 Aldehyde/histidinol dehydrogenase APT56_24720 IPR015590 Aldehyde dehydrogenase domain APT56_24720 IPR010061 Methylmalonate-semialdehyde dehydrogenase APT56_24720 IPR016162 Aldehyde dehydrogenase, N-terminal APT56_24730 IPR030678 Peptide/nickel binding protein, MppA-type APT56_24730 IPR006311 Twin-arginine translocation pathway, signal sequence APT56_24730 IPR000914 Solute-binding protein family 5 domain APT56_24730 IPR039424 Solute-binding protein family 5 APT56_24730 IPR023765 Solute-binding protein family 5, conserved site APT56_24735 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_24735 IPR035906 MetI-like superfamily APT56_24740 IPR035906 MetI-like superfamily APT56_24740 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_24745 IPR003439 ABC transporter-like APT56_24745 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal APT56_24745 IPR003593 AAA+ ATPase domain APT56_24745 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_24745 IPR017871 ABC transporter, conserved site APT56_24750 IPR036928 Amidase signature (AS) superfamily APT56_24750 IPR023631 Amidase signature domain APT56_24750 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit APT56_24750 IPR000120 Amidase APT56_24750 IPR020556 Amidase, conserved site APT56_24765 IPR015424 Pyridoxal phosphate-dependent transferase APT56_24765 IPR003437 Glycine dehydrogenase (decarboxylating) APT56_24765 IPR020581 Glycine cleavage system P protein APT56_24765 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APT56_24765 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APT56_24770 IPR002930 Glycine cleavage system H-protein APT56_24770 IPR033753 Glycine cleavage system H-protein/Simiate APT56_24770 IPR017453 Glycine cleavage system H-protein, subgroup APT56_24770 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site APT56_24770 IPR000089 Biotin/lipoyl attachment APT56_24770 IPR011053 Single hybrid motif APT56_24775 IPR006223 Glycine cleavage system T protein APT56_24775 IPR022903 Glycine cleavage system T protein, bacteria APT56_24775 IPR028896 Aminomethyltransferase-like APT56_24775 IPR006222 Aminomethyltransferase, folate-binding domain APT56_24775 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal APT56_24775 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 APT56_24775 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain APT56_24780 IPR003689 Zinc/iron permease APT56_24785 IPR019831 Manganese/iron superoxide dismutase, N-terminal APT56_24785 IPR001189 Manganese/iron superoxide dismutase APT56_24785 IPR019832 Manganese/iron superoxide dismutase, C-terminal APT56_24785 IPR019833 Manganese/iron superoxide dismutase, binding site APT56_24785 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily APT56_24785 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily APT56_24790 IPR023166 HI0933-like insert domain superfamily APT56_24790 IPR036188 FAD/NAD(P)-binding domain superfamily APT56_24790 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like APT56_24795 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal APT56_24795 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily APT56_24795 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APT56_24795 IPR000310 Orn/Lys/Arg decarboxylase, major domain APT56_24795 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APT56_24795 IPR015424 Pyridoxal phosphate-dependent transferase APT56_24795 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal APT56_24795 IPR011193 Ornithine/lysine/arginine decarboxylase APT56_24810 IPR000160 GGDEF domain APT56_24810 IPR013656 PAS fold-4 APT56_24810 IPR035965 PAS domain superfamily APT56_24810 IPR000700 PAS-associated, C-terminal APT56_24810 IPR000014 PAS domain APT56_24810 IPR029787 Nucleotide cyclase APT56_24820 IPR029054 dUTPase-like APT56_24820 IPR011962 dCTP deaminase APT56_24820 IPR033704 dUTPase, trimeric APT56_24820 IPR036157 dUTPase-like superfamily APT56_24835 IPR000808 Mrp, conserved site APT56_24835 IPR019591 Mrp/NBP35 ATP-binding protein APT56_24835 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 APT56_24835 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_24845 IPR012340 Nucleic acid-binding, OB-fold APT56_24845 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site APT56_24845 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain APT56_24845 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal APT56_24845 IPR023458 Methionine-tRNA ligase, type 1 APT56_24845 IPR014758 Methionyl-tRNA synthetase APT56_24845 IPR033911 Methioninyl-tRNA synthetase core domain APT56_24845 IPR029038 Methionyl-tRNA synthetase, Zn-domain APT56_24845 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT56_24845 IPR015413 Methionyl/Leucyl tRNA synthetase APT56_24845 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding APT56_24845 IPR002547 tRNA-binding domain APT56_24865 IPR036514 SGNH hydrolase superfamily APT56_24865 IPR002656 Acyltransferase 3 APT56_24875 IPR011006 CheY-like superfamily APT56_24875 IPR001867 OmpR/PhoB-type DNA-binding domain APT56_24875 IPR001789 Signal transduction response regulator, receiver domain APT56_24875 IPR039420 Transcriptional regulatory protein WalR-like APT56_24875 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_24880 IPR013099 Potassium channel domain APT56_24880 IPR036291 NAD(P)-binding domain superfamily APT56_24880 IPR003148 Regulator of K+ conductance, N-terminal APT56_24885 IPR025294 Protein of unknown function DUF4156 APT56_24905 IPR035919 EAL domain superfamily APT56_24905 IPR001633 EAL domain APT56_24905 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain APT56_24910 IPR001647 DNA-binding HTH domain, TetR-type APT56_24910 IPR023772 DNA-binding HTH domain, TetR-type, conserved site APT56_24910 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily APT56_24910 IPR009057 Homeobox-like domain superfamily APT56_24915 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain APT56_24915 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I APT56_24915 IPR000073 Alpha/beta hydrolase fold-1 APT56_24915 IPR029058 Alpha/Beta hydrolase fold APT56_24920 IPR012640 Membrane lipoprotein, lipid attachment site APT56_24920 IPR003423 Outer membrane efflux protein APT56_24920 IPR010131 RND efflux system, outer membrane lipoprotein, NodT APT56_24925 IPR039562 Membrane fusion protein, biotin-lipoyl like domain APT56_24930 IPR003593 AAA+ ATPase domain APT56_24930 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_24930 IPR003439 ABC transporter-like APT56_24930 IPR017871 ABC transporter, conserved site APT56_24930 IPR000412 ABC-2 transporter APT56_24935 IPR000412 ABC-2 transporter APT56_24945 IPR020904 Short-chain dehydrogenase/reductase, conserved site APT56_24945 IPR036291 NAD(P)-binding domain superfamily APT56_24945 IPR011283 Acetoacetyl-CoA reductase APT56_24945 IPR002347 Short-chain dehydrogenase/reductase SDR APT56_24950 IPR002585 Cytochrome ubiquinol oxidase subunit 1 APT56_24955 IPR003317 Cytochrome ubiquinol oxidase subunit 2 APT56_24960 IPR036390 Winged helix DNA-binding domain superfamily APT56_24960 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_24960 IPR000524 Transcription regulator HTH, GntR APT56_24960 IPR004839 Aminotransferase, class I/classII APT56_24960 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APT56_24960 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APT56_24960 IPR015424 Pyridoxal phosphate-dependent transferase APT56_24970 IPR004304 Acetamidase/Formamidase APT56_24975 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein APT56_24975 IPR017871 ABC transporter, conserved site APT56_24975 IPR003593 AAA+ ATPase domain APT56_24975 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_24975 IPR003439 ABC transporter-like APT56_24980 IPR003593 AAA+ ATPase domain APT56_24980 IPR017871 ABC transporter, conserved site APT56_24980 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal APT56_24980 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_24980 IPR003439 ABC transporter-like APT56_24990 IPR001851 ABC transporter, permease APT56_24990 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal APT56_24995 IPR028082 Periplasmic binding protein-like I APT56_24995 IPR000709 Leu/Ile/Val-binding protein APT56_24995 IPR039570 AmiC, periplasmic binding domain APT56_25000 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain APT56_25000 IPR001789 Signal transduction response regulator, receiver domain APT56_25000 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily APT56_25000 IPR005467 Histidine kinase domain APT56_25000 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APT56_25000 IPR004358 Signal transduction histidine kinase-related protein, C-terminal APT56_25000 IPR036641 HPT domain superfamily APT56_25000 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APT56_25000 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain APT56_25000 IPR003594 Histidine kinase/HSP90-like ATPase APT56_25000 IPR011006 CheY-like superfamily APT56_25005 IPR037522 HD-GYP domain APT56_25005 IPR003607 HD/PDEase domain APT56_25005 IPR011006 CheY-like superfamily APT56_25005 IPR001789 Signal transduction response regulator, receiver domain APT56_25020 IPR005064 Bordetella uptake gene APT56_25020 IPR042100 Bordetella uptake gene, domain 1 APT56_25025 IPR012830 Citrate utilization protein B APT56_25025 IPR036197 NarG-like superfamily APT56_25030 IPR023080 D-amino acid dehydrogenase DadA APT56_25030 IPR006076 FAD dependent oxidoreductase APT56_25030 IPR036188 FAD/NAD(P)-binding domain superfamily APT56_25035 IPR000847 Transcription regulator HTH, LysR APT56_25035 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_25035 IPR005119 LysR, substrate-binding APT56_25035 IPR036390 Winged helix DNA-binding domain superfamily APT56_25040 IPR009056 Cytochrome c-like domain APT56_25040 IPR036909 Cytochrome c-like domain superfamily APT56_25045 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit APT56_25045 IPR009056 Cytochrome c-like domain APT56_25045 IPR036909 Cytochrome c-like domain superfamily APT56_25050 IPR010987 Glutathione S-transferase, C-terminal-like APT56_25050 IPR036249 Thioredoxin-like superfamily APT56_25050 IPR004046 Glutathione S-transferase, C-terminal APT56_25050 IPR004045 Glutathione S-transferase, N-terminal APT56_25050 IPR036282 Glutathione S-transferase, C-terminal domain superfamily APT56_25055 IPR036259 MFS transporter superfamily APT56_25055 IPR005829 Sugar transporter, conserved site APT56_25055 IPR011701 Major facilitator superfamily APT56_25055 IPR020846 Major facilitator superfamily domain APT56_25055 IPR004736 MFS transporter, metabolite:H symporter APT56_25065 IPR037415 Octopine catabolism/uptake operon regulatory protein OccR, PBP2 domain APT56_25065 IPR036390 Winged helix DNA-binding domain superfamily APT56_25065 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_25065 IPR005119 LysR, substrate-binding APT56_25065 IPR000847 Transcription regulator HTH, LysR APT56_25070 IPR032466 Metal-dependent hydrolase APT56_25070 IPR017593 Allantoinase APT56_25070 IPR006680 Amidohydrolase-related APT56_25070 IPR002195 Dihydroorotase, conserved site APT56_25070 IPR011059 Metal-dependent hydrolase, composite domain superfamily APT56_25075 IPR010158 Amidase, carbamoylase-type APT56_25075 IPR036264 Bacterial exopeptidase dimerisation domain APT56_25075 IPR011650 Peptidase M20, dimerisation domain APT56_25075 IPR002933 Peptidase M20 APT56_25095 IPR008929 Chondroitin AC/alginate lyase APT56_25095 IPR008397 Alginate lyase domain APT56_25110 IPR035977 Ribosomal protein L36 superfamily APT56_25110 IPR000473 Ribosomal protein L36 APT56_25120 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain APT56_25120 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain APT56_25120 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel APT56_25120 IPR036008 Aconitase, iron-sulfur domain APT56_25120 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 APT56_25120 IPR006249 Aconitase/Iron-responsive element-binding protein 2 APT56_25120 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent APT56_25125 IPR007400 PrpF protein APT56_25125 IPR012709 2-methyl-aconitate isomerase PrpF APT56_25135 IPR024083 Fumarase/histidase, N-terminal APT56_25135 IPR029419 Argininosuccinate lyase, C-terminal APT56_25135 IPR009049 Argininosuccinate lyase APT56_25135 IPR008948 L-Aspartase-like APT56_25135 IPR022761 Fumarate lyase, N-terminal APT56_25135 IPR000362 Fumarate lyase family APT56_25135 IPR020557 Fumarate lyase, conserved site APT56_25140 IPR005467 Histidine kinase domain APT56_25140 IPR003594 Histidine kinase/HSP90-like ATPase APT56_25140 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain APT56_25140 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily APT56_25140 IPR004358 Signal transduction histidine kinase-related protein, C-terminal APT56_25140 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APT56_25140 IPR003660 HAMP domain APT56_25145 IPR020904 Short-chain dehydrogenase/reductase, conserved site APT56_25145 IPR036291 NAD(P)-binding domain superfamily APT56_25145 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase APT56_25145 IPR002347 Short-chain dehydrogenase/reductase SDR APT56_25150 IPR008567 3-keto-5-aminohexanoate cleavage enzyme APT56_25150 IPR013785 Aldolase-type TIM barrel APT56_25165 IPR000182 GNAT domain APT56_25165 IPR016181 Acyl-CoA N-acyltransferase APT56_25170 IPR007197 Radical SAM APT56_25170 IPR040072 Methyltransferase (Class A) APT56_25170 IPR013785 Aldolase-type TIM barrel APT56_25170 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr APT56_25200 IPR005064 Bordetella uptake gene APT56_25200 IPR042100 Bordetella uptake gene, domain 1 APT56_25205 IPR013785 Aldolase-type TIM barrel APT56_25205 IPR000891 Pyruvate carboxyltransferase APT56_25210 IPR023606 CoA-transferase family III domain superfamily APT56_25210 IPR003673 CoA-transferase family III APT56_25215 IPR000847 Transcription regulator HTH, LysR APT56_25215 IPR005119 LysR, substrate-binding APT56_25215 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_25215 IPR036390 Winged helix DNA-binding domain superfamily APT56_25220 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type APT56_25220 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT56_25225 IPR005944 Proline iminopeptidase APT56_25225 IPR002410 Peptidase S33 APT56_25225 IPR000073 Alpha/beta hydrolase fold-1 APT56_25225 IPR029058 Alpha/Beta hydrolase fold APT56_25230 IPR008867 Thiazole synthase APT56_25230 IPR033983 Thiazole synthase ThiG APT56_25230 IPR010035 ThiS, thiamine-biosynthesis APT56_25230 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp APT56_25230 IPR012675 Beta-grasp domain superfamily APT56_25230 IPR013785 Aldolase-type TIM barrel APT56_25230 IPR003749 Sulfur carrier ThiS/MoaD-like APT56_25235 IPR036779 LysM domain superfamily APT56_25235 IPR007055 BON domain APT56_25235 IPR018392 LysM domain APT56_25235 IPR014004 Transport-associated and nodulation domain, bacteria APT56_25240 IPR004125 Signal recognition particle, SRP54 subunit, M-domain APT56_25240 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_25240 IPR003593 AAA+ ATPase domain APT56_25240 IPR004780 Signal recognition particle protein APT56_25240 IPR022941 Signal recognition particle, SRP54 subunit APT56_25240 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily APT56_25240 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain APT56_25240 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily APT56_25240 IPR013822 Signal recognition particle SRP54, helical bundle APT56_25245 IPR017562 Cytochrome c-type biogenesis protein CcsA APT56_25245 IPR002541 Cytochrome c assembly protein APT56_25255 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily APT56_25255 IPR002502 N-acetylmuramoyl-L-alanine amidase domain APT56_25260 IPR036282 Glutathione S-transferase, C-terminal domain superfamily APT56_25260 IPR036249 Thioredoxin-like superfamily APT56_25260 IPR010987 Glutathione S-transferase, C-terminal-like APT56_25260 IPR004045 Glutathione S-transferase, N-terminal APT56_25260 IPR004046 Glutathione S-transferase, C-terminal APT56_25285 IPR036291 NAD(P)-binding domain superfamily APT56_25285 IPR001509 NAD-dependent epimerase/dehydratase APT56_25290 IPR011264 Betaine aldehyde dehydrogenase APT56_25290 IPR016161 Aldehyde/histidinol dehydrogenase APT56_25290 IPR016163 Aldehyde dehydrogenase, C-terminal APT56_25290 IPR016160 Aldehyde dehydrogenase, cysteine active site APT56_25290 IPR015590 Aldehyde dehydrogenase domain APT56_25290 IPR029510 Aldehyde dehydrogenase, glutamic acid active site APT56_25290 IPR016162 Aldehyde dehydrogenase, N-terminal APT56_25295 IPR000847 Transcription regulator HTH, LysR APT56_25295 IPR037405 HTH-type transcriptional regulator GbpR, PBP2 domain APT56_25295 IPR036390 Winged helix DNA-binding domain superfamily APT56_25295 IPR005119 LysR, substrate-binding APT56_25295 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_25300 IPR010130 Type I secretion outer membrane protein, TolC APT56_25300 IPR003423 Outer membrane efflux protein APT56_25305 IPR010129 Type I secretion membrane fusion protein, HlyD family APT56_25305 IPR006144 Secretion protein HlyD, conserved site APT56_25310 IPR010128 ATPase, type I secretion system, PrtD APT56_25310 IPR036640 ABC transporter type 1, transmembrane domain superfamily APT56_25310 IPR003439 ABC transporter-like APT56_25310 IPR003593 AAA+ ATPase domain APT56_25310 IPR017871 ABC transporter, conserved site APT56_25310 IPR011527 ABC transporter type 1, transmembrane domain APT56_25310 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_25335 IPR005471 Transcription regulator IclR, N-terminal APT56_25335 IPR029016 GAF-like domain superfamily APT56_25335 IPR036390 Winged helix DNA-binding domain superfamily APT56_25335 IPR014757 Transcription regulator IclR, C-terminal APT56_25335 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_25345 IPR031338 KDPG/KHG aldolase, active site 2 APT56_25345 IPR013785 Aldolase-type TIM barrel APT56_25345 IPR000887 KDPG/KHG aldolase APT56_25350 IPR036849 Enolase-like, C-terminal domain superfamily APT56_25350 IPR023592 D-galactonate dehydratase APT56_25350 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site APT56_25350 IPR034593 Mandelate racemase-like APT56_25350 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal APT56_25350 IPR029065 Enolase C-terminal domain-like APT56_25350 IPR029017 Enolase-like, N-terminal APT56_25350 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain APT56_25355 IPR036259 MFS transporter superfamily APT56_25355 IPR020846 Major facilitator superfamily domain APT56_25355 IPR011701 Major facilitator superfamily APT56_25360 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_25360 IPR017871 ABC transporter, conserved site APT56_25360 IPR003439 ABC transporter-like APT56_25360 IPR003593 AAA+ ATPase domain APT56_25375 IPR039423 TonB-dependent receptor-like APT56_25375 IPR010916 TonB box, conserved site APT56_25375 IPR030149 TonB-dependent siderophore receptor FcuA/FatA APT56_25375 IPR010105 TonB-dependent siderophore receptor APT56_25375 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily APT56_25375 IPR010917 TonB-dependent receptor, conserved site APT56_25375 IPR012910 TonB-dependent receptor, plug domain APT56_25375 IPR037066 TonB-dependent receptor, plug domain superfamily APT56_25375 IPR000531 TonB-dependent receptor-like, beta-barrel APT56_25380 IPR036259 MFS transporter superfamily APT56_25380 IPR020846 Major facilitator superfamily domain APT56_25380 IPR011701 Major facilitator superfamily APT56_25390 IPR017507 Transcription regulator, HipB-like APT56_25390 IPR010982 Lambda repressor-like, DNA-binding domain superfamily APT56_25390 IPR001387 Cro/C1-type helix-turn-helix domain APT56_25395 IPR019805 Heat shock protein Hsp90, conserved site APT56_25395 IPR037196 HSP90, C-terminal domain APT56_25395 IPR003594 Histidine kinase/HSP90-like ATPase APT56_25395 IPR001404 Heat shock protein Hsp90 family APT56_25395 IPR020575 Heat shock protein Hsp90, N-terminal APT56_25395 IPR020568 Ribosomal protein S5 domain 2-type fold APT56_25395 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APT56_25405 IPR006043 Xanthine/uracil/vitamin C permease APT56_25405 IPR006042 Xanthine/uracil permease APT56_25415 IPR002104 Integrase, catalytic domain APT56_25415 IPR035069 TTHA1013/TTHA0281-like APT56_25415 IPR010998 Integrase/recombinase, N-terminal APT56_25415 IPR011010 DNA breaking-rejoining enzyme, catalytic core APT56_25415 IPR013762 Integrase-like, catalytic domain superfamily APT56_25430 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type APT56_25430 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase APT56_25430 IPR029052 Metallo-dependent phosphatase-like APT56_25450 IPR023220 Type IV secretion system, VirB5-domain APT56_25450 IPR014158 Type IV secretion system, VirB5 APT56_25480 IPR009241 Toxin HigB-like APT56_25480 IPR014056 Addiction module killer protein, predicted APT56_25495 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter APT56_25495 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APT56_25495 IPR018313 Solute-binding protein family 3, conserved site APT56_25500 IPR023059 Foldase protein PrsA APT56_25500 IPR037041 Trigger factor, C-terminal domain superfamily APT56_25500 IPR008880 Trigger factor, C-terminal APT56_25500 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site APT56_25500 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type APT56_25500 IPR027304 Trigger factor/SurA domain superfamily APT56_25505 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_25505 IPR003593 AAA+ ATPase domain APT56_25505 IPR003439 ABC transporter-like APT56_25515 IPR001851 ABC transporter, permease APT56_25520 IPR005999 Glycerol kinase APT56_25520 IPR018484 Carbohydrate kinase, FGGY, N-terminal APT56_25520 IPR018483 Carbohydrate kinase, FGGY, conserved site APT56_25520 IPR018485 Carbohydrate kinase, FGGY, C-terminal APT56_25520 IPR000577 Carbohydrate kinase, FGGY APT56_25530 IPR008567 3-keto-5-aminohexanoate cleavage enzyme APT56_25530 IPR013785 Aldolase-type TIM barrel APT56_25540 IPR002347 Short-chain dehydrogenase/reductase SDR APT56_25540 IPR036291 NAD(P)-binding domain superfamily APT56_25540 IPR011294 3-hydroxybutyrate dehydrogenase APT56_25540 IPR020904 Short-chain dehydrogenase/reductase, conserved site APT56_25545 IPR005119 LysR, substrate-binding APT56_25545 IPR000847 Transcription regulator HTH, LysR APT56_25545 IPR036390 Winged helix DNA-binding domain superfamily APT56_25545 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_25650 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_25650 IPR001789 Signal transduction response regulator, receiver domain APT56_25650 IPR016032 Signal transduction response regulator, C-terminal effector APT56_25650 IPR001867 OmpR/PhoB-type DNA-binding domain APT56_25650 IPR011006 CheY-like superfamily APT56_25650 IPR039420 Transcriptional regulatory protein WalR-like APT56_25655 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_25655 IPR039425 RNA polymerase sigma-70 like APT56_25655 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 APT56_25655 IPR007627 RNA polymerase sigma-70 region 2 APT56_25655 IPR014284 RNA polymerase sigma-70 like domain APT56_25655 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site APT56_25655 IPR013325 RNA polymerase sigma factor, region 2 APT56_25655 IPR013324 RNA polymerase sigma factor, region 3/4-like APT56_25670 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily APT56_25670 IPR040442 Pyruvate kinase-like domain superfamily APT56_25670 IPR039556 ICL/PEPM domain APT56_25670 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site APT56_25675 IPR000847 Transcription regulator HTH, LysR APT56_25675 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_25675 IPR005119 LysR, substrate-binding APT56_25675 IPR036390 Winged helix DNA-binding domain superfamily APT56_25680 IPR013113 FAD-binding 9, siderophore-interacting APT56_25680 IPR017927 FAD-binding domain, ferredoxin reductase-type APT56_25680 IPR017938 Riboflavin synthase-like beta-barrel APT56_25680 IPR007037 Siderophore-interacting protein, C-terminal domain APT56_25680 IPR039374 Siderophore-interacting protein APT56_25680 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain APT56_25685 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_25685 IPR036390 Winged helix DNA-binding domain superfamily APT56_25685 IPR005149 Transcription regulator PadR, N-terminal APT56_25700 IPR011701 Major facilitator superfamily APT56_25700 IPR020846 Major facilitator superfamily domain APT56_25700 IPR036259 MFS transporter superfamily APT56_25705 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain APT56_25705 IPR036291 NAD(P)-binding domain superfamily APT56_25705 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily APT56_25705 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal APT56_25705 IPR000304 Pyrroline-5-carboxylate reductase APT56_25710 IPR013785 Aldolase-type TIM barrel APT56_25710 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent APT56_25710 IPR037396 FMN hydroxy acid dehydrogenase domain APT56_25710 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site APT56_25710 IPR000262 FMN-dependent dehydrogenase APT56_25715 IPR016164 FAD-linked oxidase-like, C-terminal APT56_25715 IPR004113 FAD-linked oxidase, C-terminal APT56_25715 IPR004490 Glycolate oxidase subunit GlcD APT56_25715 IPR006094 FAD linked oxidase, N-terminal APT56_25715 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 APT56_25715 IPR016166 FAD-binding domain, PCMH-type APT56_25715 IPR036318 FAD-binding, type PCMH-like superfamily APT56_25725 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_25725 IPR003593 AAA+ ATPase domain APT56_25725 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA APT56_25725 IPR013611 Transport-associated OB, type 2 APT56_25725 IPR008995 Molybdate/tungstate binding, C-terminal APT56_25725 IPR017871 ABC transporter, conserved site APT56_25725 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit APT56_25725 IPR003439 ABC transporter-like APT56_25730 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APT56_25730 IPR035906 MetI-like superfamily APT56_25735 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA APT56_25735 IPR020625 Schiff base-forming aldolase, active site APT56_25735 IPR020624 Schiff base-forming aldolase, conserved site APT56_25735 IPR002220 DapA-like APT56_25735 IPR013785 Aldolase-type TIM barrel APT56_25750 IPR002549 Transmembrane protein TqsA-like APT56_25755 IPR036390 Winged helix DNA-binding domain superfamily APT56_25755 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_25755 IPR000847 Transcription regulator HTH, LysR APT56_25755 IPR005119 LysR, substrate-binding APT56_25760 IPR022824 Multidrug resistance protein MdtA APT56_25760 IPR006143 RND efflux pump, membrane fusion protein APT56_25760 IPR039562 Membrane fusion protein, biotin-lipoyl like domain APT56_25765 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 APT56_25765 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APT56_25765 IPR001036 Acriflavin resistance protein APT56_25770 IPR010131 RND efflux system, outer membrane lipoprotein, NodT APT56_25770 IPR003423 Outer membrane efflux protein APT56_25810 IPR023214 HAD superfamily APT56_25810 IPR036412 HAD-like superfamily APT56_25810 IPR010708 5'(3')-deoxyribonucleotidase APT56_25820 IPR000524 Transcription regulator HTH, GntR APT56_25820 IPR008920 Transcription regulator FadR/GntR, C-terminal APT56_25820 IPR011711 GntR, C-terminal APT56_25820 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_25820 IPR036390 Winged helix DNA-binding domain superfamily APT56_25825 IPR020904 Short-chain dehydrogenase/reductase, conserved site APT56_25825 IPR036291 NAD(P)-binding domain superfamily APT56_25825 IPR002347 Short-chain dehydrogenase/reductase SDR APT56_25830 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase APT56_25830 IPR022893 Shikimate dehydrogenase family APT56_25830 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal APT56_25830 IPR011342 Shikimate dehydrogenase APT56_25830 IPR041121 SDH, C-terminal APT56_25830 IPR036291 NAD(P)-binding domain superfamily APT56_25835 IPR028082 Periplasmic binding protein-like I APT56_25835 IPR028081 Leucine-binding protein domain APT56_25835 IPR000709 Leu/Ile/Val-binding protein APT56_25840 IPR001851 ABC transporter, permease APT56_25850 IPR017871 ABC transporter, conserved site APT56_25850 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_25850 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal APT56_25850 IPR003439 ABC transporter-like APT56_25850 IPR003593 AAA+ ATPase domain APT56_25855 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_25855 IPR017871 ABC transporter, conserved site APT56_25855 IPR003439 ABC transporter-like APT56_25855 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein APT56_25855 IPR003593 AAA+ ATPase domain APT56_25860 IPR002347 Short-chain dehydrogenase/reductase SDR APT56_25860 IPR020904 Short-chain dehydrogenase/reductase, conserved site APT56_25860 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase APT56_25860 IPR036291 NAD(P)-binding domain superfamily APT56_25865 IPR017597 Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y APT56_25865 IPR001017 Dehydrogenase, E1 component APT56_25865 IPR029061 Thiamin diphosphate-binding fold APT56_25875 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain APT56_25875 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily APT56_25875 IPR000089 Biotin/lipoyl attachment APT56_25875 IPR036625 E3-binding domain superfamily APT56_25875 IPR011053 Single hybrid motif APT56_25875 IPR006257 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex APT56_25875 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site APT56_25875 IPR004167 Peripheral subunit-binding domain APT56_25880 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily APT56_25880 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site APT56_25880 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain APT56_25880 IPR023753 FAD/NAD(P)-binding domain APT56_25880 IPR036188 FAD/NAD(P)-binding domain superfamily APT56_25880 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I APT56_25880 IPR006258 Dihydrolipoamide dehydrogenase APT56_25885 IPR036390 Winged helix DNA-binding domain superfamily APT56_25885 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_25885 IPR000847 Transcription regulator HTH, LysR APT56_25885 IPR005119 LysR, substrate-binding APT56_25890 IPR042096 Dihydroxy-acid dehydratase, C-terminal APT56_25890 IPR004404 Dihydroxy-acid dehydratase APT56_25890 IPR037237 IlvD/EDD, N-terminal domain APT56_25890 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site APT56_25890 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase APT56_25900 IPR005668 2-isopropylmalate synthase APT56_25900 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily APT56_25900 IPR000891 Pyruvate carboxyltransferase APT56_25900 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site APT56_25900 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain APT56_25900 IPR013785 Aldolase-type TIM barrel APT56_25900 IPR039371 LeuA, N-terminal catalytic TIM barrel domain APT56_25905 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_25905 IPR000847 Transcription regulator HTH, LysR APT56_25905 IPR036390 Winged helix DNA-binding domain superfamily APT56_25905 IPR005119 LysR, substrate-binding APT56_25910 IPR016181 Acyl-CoA N-acyltransferase APT56_25910 IPR000182 GNAT domain APT56_25925 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT56_25925 IPR018317 Queuosine biosynthesis protein QueC APT56_25930 IPR033129 Phosphoenolpyruvate carboxylase, His active site APT56_25930 IPR021135 Phosphoenolpyruvate carboxylase APT56_25930 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type APT56_25930 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily APT56_25930 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site APT56_25935 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding APT56_25935 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site APT56_25935 IPR036291 NAD(P)-binding domain superfamily APT56_25935 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal APT56_25935 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily APT56_25935 IPR022694 3-hydroxyacyl-CoA dehydrogenase APT56_25935 IPR013328 6-phosphogluconate dehydrogenase, domain 2 APT56_25940 IPR006160 Short chain fatty acid transporter AtoE APT56_25940 IPR006161 Conserved hypothetical protein CHP00336 APT56_25945 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase APT56_25945 IPR036291 NAD(P)-binding domain superfamily APT56_25945 IPR020904 Short-chain dehydrogenase/reductase, conserved site APT56_25945 IPR002347 Short-chain dehydrogenase/reductase SDR APT56_25950 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR APT56_25950 IPR029016 GAF-like domain superfamily APT56_25950 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_25950 IPR036390 Winged helix DNA-binding domain superfamily APT56_25950 IPR014757 Transcription regulator IclR, C-terminal APT56_25950 IPR005471 Transcription regulator IclR, N-terminal APT56_25955 IPR012792 3-oxoacid CoA-transferase, subunit A APT56_25955 IPR004165 Coenzyme A transferase family I APT56_25955 IPR004163 Coenzyme A transferase binding site APT56_25955 IPR037171 NagB/RpiA transferase-like APT56_25960 IPR004165 Coenzyme A transferase family I APT56_25960 IPR012791 3-oxoacid CoA-transferase, subunit B APT56_25960 IPR004164 Coenzyme A transferase active site APT56_25960 IPR037171 NagB/RpiA transferase-like APT56_25975 IPR000073 Alpha/beta hydrolase fold-1 APT56_25975 IPR022742 Serine aminopeptidase, S33 APT56_25975 IPR026968 3-oxoadipate enol-lactonase 1/2 APT56_25975 IPR029058 Alpha/Beta hydrolase fold APT56_25995 IPR036874 Carbonic anhydrase superfamily APT56_25995 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site APT56_25995 IPR001765 Carbonic anhydrase APT56_26000 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_26000 IPR000524 Transcription regulator HTH, GntR APT56_26000 IPR008920 Transcription regulator FadR/GntR, C-terminal APT56_26000 IPR011711 GntR, C-terminal APT56_26000 IPR036390 Winged helix DNA-binding domain superfamily APT56_26005 IPR020904 Short-chain dehydrogenase/reductase, conserved site APT56_26005 IPR002347 Short-chain dehydrogenase/reductase SDR APT56_26005 IPR036291 NAD(P)-binding domain superfamily APT56_26005 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase APT56_26015 IPR001851 ABC transporter, permease APT56_26020 IPR001851 ABC transporter, permease APT56_26020 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal APT56_26025 IPR017871 ABC transporter, conserved site APT56_26025 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal APT56_26025 IPR003593 AAA+ ATPase domain APT56_26025 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_26025 IPR003439 ABC transporter-like APT56_26030 IPR017871 ABC transporter, conserved site APT56_26030 IPR003439 ABC transporter-like APT56_26030 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein APT56_26030 IPR003593 AAA+ ATPase domain APT56_26030 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_26035 IPR036291 NAD(P)-binding domain superfamily APT56_26035 IPR002347 Short-chain dehydrogenase/reductase SDR APT56_26035 IPR020904 Short-chain dehydrogenase/reductase, conserved site APT56_26040 IPR002347 Short-chain dehydrogenase/reductase SDR APT56_26040 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase APT56_26040 IPR036291 NAD(P)-binding domain superfamily APT56_26040 IPR020904 Short-chain dehydrogenase/reductase, conserved site APT56_26050 IPR004045 Glutathione S-transferase, N-terminal APT56_26050 IPR036282 Glutathione S-transferase, C-terminal domain superfamily APT56_26050 IPR010987 Glutathione S-transferase, C-terminal-like APT56_26050 IPR034343 Uncharacterized GST-like protein YibF APT56_26050 IPR036249 Thioredoxin-like superfamily APT56_26050 IPR004046 Glutathione S-transferase, C-terminal APT56_26065 IPR005119 LysR, substrate-binding APT56_26065 IPR000847 Transcription regulator HTH, LysR APT56_26065 IPR036390 Winged helix DNA-binding domain superfamily APT56_26065 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_26075 IPR036390 Winged helix DNA-binding domain superfamily APT56_26075 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_26075 IPR005119 LysR, substrate-binding APT56_26075 IPR000847 Transcription regulator HTH, LysR APT56_26080 IPR020846 Major facilitator superfamily domain APT56_26080 IPR036259 MFS transporter superfamily APT56_26080 IPR011701 Major facilitator superfamily APT56_26085 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site APT56_26085 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily APT56_26085 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain APT56_26085 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain APT56_26100 IPR042100 Bordetella uptake gene, domain 1 APT56_26100 IPR005064 Bordetella uptake gene APT56_26105 IPR020845 AMP-binding, conserved site APT56_26105 IPR025110 AMP-binding enzyme, C-terminal domain APT56_26105 IPR000873 AMP-dependent synthetase/ligase APT56_26105 IPR042099 AMP-dependent synthetase-like superfamily APT56_26115 IPR002347 Short-chain dehydrogenase/reductase SDR APT56_26115 IPR036291 NAD(P)-binding domain superfamily APT56_26115 IPR020904 Short-chain dehydrogenase/reductase, conserved site APT56_26120 IPR014710 RmlC-like jelly roll fold APT56_26120 IPR023956 Acireductone dioxygenase ARD, bacteria APT56_26120 IPR004313 Acireductone dioxygenase ARD family APT56_26120 IPR011051 RmlC-like cupin domain superfamily APT56_26125 IPR004872 Lipoprotein NlpA family APT56_26135 IPR036551 Flavin prenyltransferase-like APT56_26135 IPR004507 Flavin prenyltransferase UbiX-like APT56_26135 IPR003382 Flavoprotein APT56_26140 IPR014434 Monothiol glutaredoxin APT56_26140 IPR004480 Monothiol glutaredoxin-related APT56_26140 IPR033658 Glutaredoxin, PICOT-like APT56_26140 IPR036249 Thioredoxin-like superfamily APT56_26140 IPR002109 Glutaredoxin APT56_26145 IPR007848 Methyltransferase small domain APT56_26145 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific APT56_26145 IPR040758 Release factor glutamine methyltransferase, N-terminal domain APT56_26145 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT56_26145 IPR002052 DNA methylase, N-6 adenine-specific, conserved site APT56_26145 IPR004556 Methyltransferase HemK-like APT56_26150 IPR004373 Peptide chain release factor 1 APT56_26150 IPR000352 Peptide chain release factor class I APT56_26150 IPR005139 Peptide chain release factor APT56_26155 IPR036291 NAD(P)-binding domain superfamily APT56_26155 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase APT56_26155 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase APT56_26155 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain APT56_26155 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal APT56_26155 IPR018214 Glutamyl-tRNA reductase, conserved site APT56_26155 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily APT56_26155 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily APT56_26165 IPR004778 Homoserine/Threonine efflux protein APT56_26165 IPR001123 Amino acid exporter protein, LeuE-type APT56_26170 IPR019888 Transcription regulator AsnC-type APT56_26170 IPR011991 ArsR-like helix-turn-helix domain APT56_26170 IPR019885 Transcription regulator HTH, AsnC-type, conserved site APT56_26170 IPR000485 AsnC-type HTH domain APT56_26170 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain APT56_26170 IPR011008 Dimeric alpha-beta barrel APT56_26170 IPR036390 Winged helix DNA-binding domain superfamily APT56_26170 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_26180 IPR000620 EamA domain APT56_26185 IPR005064 Bordetella uptake gene APT56_26185 IPR042100 Bordetella uptake gene, domain 1 APT56_26190 IPR026040 Hydroxypyruvate isomerase-like APT56_26190 IPR036237 Xylose isomerase-like superfamily APT56_26190 IPR013022 Xylose isomerase-like, TIM barrel domain APT56_26195 IPR012910 TonB-dependent receptor, plug domain APT56_26195 IPR039426 Vitamin B12 transporter BtuB-like APT56_26195 IPR000531 TonB-dependent receptor-like, beta-barrel APT56_26195 IPR037066 TonB-dependent receptor, plug domain superfamily APT56_26205 IPR004736 MFS transporter, metabolite:H symporter APT56_26205 IPR005829 Sugar transporter, conserved site APT56_26205 IPR036259 MFS transporter superfamily APT56_26205 IPR020846 Major facilitator superfamily domain APT56_26205 IPR011701 Major facilitator superfamily APT56_26210 IPR005119 LysR, substrate-binding APT56_26210 IPR036390 Winged helix DNA-binding domain superfamily APT56_26210 IPR037405 HTH-type transcriptional regulator GbpR, PBP2 domain APT56_26210 IPR000847 Transcription regulator HTH, LysR APT56_26210 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_26215 IPR008920 Transcription regulator FadR/GntR, C-terminal APT56_26215 IPR011711 GntR, C-terminal APT56_26215 IPR000524 Transcription regulator HTH, GntR APT56_26215 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_26215 IPR036390 Winged helix DNA-binding domain superfamily APT56_26220 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily APT56_26220 IPR010737 Four-carbon acid sugar kinase, N-terminal domain APT56_26220 IPR031475 Nucleotide-binding C-terminal domain APT56_26220 IPR042213 Nucleotide-binding, C-terminal domain superfamily APT56_26225 IPR036291 NAD(P)-binding domain superfamily APT56_26225 IPR013328 6-phosphogluconate dehydrogenase, domain 2 APT56_26225 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain APT56_26225 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding APT56_26225 IPR015815 3-hydroxyisobutyrate dehydrogenase-related APT56_26225 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily APT56_26230 IPR036291 NAD(P)-binding domain superfamily APT56_26230 IPR001509 NAD-dependent epimerase/dehydratase APT56_26235 IPR026040 Hydroxypyruvate isomerase-like APT56_26235 IPR013022 Xylose isomerase-like, TIM barrel domain APT56_26235 IPR036237 Xylose isomerase-like superfamily APT56_26240 IPR001303 Class II aldolase/adducin N-terminal APT56_26240 IPR036409 Class II aldolase/adducin N-terminal domain superfamily APT56_26255 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase APT56_26255 IPR029058 Alpha/Beta hydrolase fold APT56_26255 IPR000073 Alpha/beta hydrolase fold-1 APT56_26275 IPR003010 Carbon-nitrogen hydrolase APT56_26275 IPR036526 Carbon-nitrogen hydrolase superfamily APT56_26275 IPR001110 Uncharacterised protein family UPF0012, conserved site APT56_26280 IPR020846 Major facilitator superfamily domain APT56_26280 IPR011701 Major facilitator superfamily APT56_26280 IPR036259 MFS transporter superfamily APT56_26285 IPR036390 Winged helix DNA-binding domain superfamily APT56_26285 IPR005119 LysR, substrate-binding APT56_26285 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_26285 IPR000847 Transcription regulator HTH, LysR APT56_26290 IPR020845 AMP-binding, conserved site APT56_26290 IPR025110 AMP-binding enzyme, C-terminal domain APT56_26290 IPR000873 AMP-dependent synthetase/ligase APT56_26290 IPR042099 AMP-dependent synthetase-like superfamily APT56_26295 IPR036291 NAD(P)-binding domain superfamily APT56_26295 IPR020904 Short-chain dehydrogenase/reductase, conserved site APT56_26295 IPR002347 Short-chain dehydrogenase/reductase SDR APT56_26300 IPR020610 Thiolase, active site APT56_26300 IPR002155 Thiolase APT56_26300 IPR016039 Thiolase-like APT56_26300 IPR020615 Thiolase, acyl-enzyme intermediate active site APT56_26300 IPR020616 Thiolase, N-terminal APT56_26300 IPR020613 Thiolase, conserved site APT56_26300 IPR020617 Thiolase, C-terminal APT56_26305 IPR023738 Maltoporin APT56_26305 IPR036998 Porin, LamB-type superfamily APT56_26305 IPR003192 Porin, LamB-type APT56_26315 IPR008949 Isoprenoid synthase domain superfamily APT56_26315 IPR000092 Polyprenyl synthetase APT56_26315 IPR033749 Polyprenyl synthetase, conserved site APT56_26320 IPR036164 L21-like superfamily APT56_26320 IPR028909 Ribosomal protein L21-like APT56_26320 IPR018258 Ribosomal protein L21, conserved site APT56_26320 IPR001787 Ribosomal protein L21 APT56_26325 IPR018261 Ribosomal protein L27, conserved site APT56_26325 IPR001684 Ribosomal protein L27 APT56_26330 IPR035101 GTP-binding protein, Obg-type APT56_26330 IPR031167 OBG-type guanine nucleotide-binding (G) domain APT56_26330 IPR006169 GTP1/OBG domain APT56_26330 IPR006073 GTP binding domain APT56_26330 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_26330 IPR014100 GTP-binding protein Obg/CgtA APT56_26330 IPR036726 GTP1/OBG domain superfamily APT56_26330 IPR006074 GTP1/OBG, conserved site APT56_26335 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase APT56_26335 IPR011529 Glutamate 5-kinase APT56_26335 IPR001057 Glutamate/acetylglutamate kinase APT56_26335 IPR036393 Acetylglutamate kinase-like superfamily APT56_26335 IPR019797 Glutamate 5-kinase, conserved site APT56_26335 IPR001048 Aspartate/glutamate/uridylate kinase APT56_26335 IPR041739 Glutamate-5-kinase domain APT56_26335 IPR002478 PUA domain APT56_26335 IPR036974 PUA domain superfamily APT56_26335 IPR015947 PUA-like superfamily APT56_26350 IPR005791 Protein translocase subunit SecD APT56_26350 IPR000731 Sterol-sensing domain APT56_26350 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site APT56_26350 IPR005665 Protein-export membrane protein SecF, bacterial APT56_26350 IPR022645 Protein-export membrane protein SecD/SecF, bacterial APT56_26350 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial APT56_26355 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B APT56_26355 IPR038521 ThiC/Bza superfamily APT56_26355 IPR025747 ThiC-associated domain APT56_26355 IPR037509 Phosphomethylpyrimidine synthase APT56_26360 IPR016166 FAD-binding domain, PCMH-type APT56_26360 IPR036318 FAD-binding, type PCMH-like superfamily APT56_26360 IPR016164 FAD-linked oxidase-like, C-terminal APT56_26360 IPR004113 FAD-linked oxidase, C-terminal APT56_26360 IPR006094 FAD linked oxidase, N-terminal APT56_26360 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 APT56_26365 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_26365 IPR023730 HTH-type transcriptional repressor NanR APT56_26365 IPR000524 Transcription regulator HTH, GntR APT56_26365 IPR008920 Transcription regulator FadR/GntR, C-terminal APT56_26365 IPR036390 Winged helix DNA-binding domain superfamily APT56_26365 IPR011711 GntR, C-terminal APT56_26370 IPR029787 Nucleotide cyclase APT56_26370 IPR013655 PAS fold-3 APT56_26370 IPR001633 EAL domain APT56_26370 IPR013656 PAS fold-4 APT56_26370 IPR035965 PAS domain superfamily APT56_26370 IPR000700 PAS-associated, C-terminal APT56_26370 IPR000014 PAS domain APT56_26370 IPR035919 EAL domain superfamily APT56_26370 IPR001610 PAC motif APT56_26370 IPR000160 GGDEF domain APT56_26370 IPR007895 MASE1 APT56_26375 IPR035985 Ubiquitin-activating enzyme APT56_26375 IPR000594 THIF-type NAD/FAD binding fold APT56_26375 IPR012731 Thiazole biosynthesis adenylyltransferase ThiF APT56_26380 IPR029045 ClpP/crotonase-like domain superfamily APT56_26380 IPR001478 PDZ domain APT56_26380 IPR005151 Tail specific protease APT56_26380 IPR036034 PDZ superfamily APT56_26380 IPR004447 C-terminal-processing peptidase S41A APT56_26385 IPR016047 Peptidase M23 APT56_26385 IPR011055 Duplicated hybrid motif APT56_26390 IPR013078 Histidine phosphatase superfamily, clade-1 APT56_26390 IPR029033 Histidine phosphatase superfamily APT56_26390 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site APT56_26390 IPR005952 Phosphoglycerate mutase 1 APT56_26400 IPR036249 Thioredoxin-like superfamily APT56_26400 IPR011767 Glutaredoxin active site APT56_26400 IPR002109 Glutaredoxin APT56_26400 IPR014025 Glutaredoxin subgroup APT56_26400 IPR011900 Glutaredoxin, GrxC APT56_26405 IPR035958 SecB-like superfamily APT56_26405 IPR003708 Bacterial protein export chaperone SecB APT56_26410 IPR036291 NAD(P)-binding domain superfamily APT56_26410 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal APT56_26410 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal APT56_26410 IPR013328 6-phosphogluconate dehydrogenase, domain 2 APT56_26410 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily APT56_26410 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent APT56_26415 IPR042100 Bordetella uptake gene, domain 1 APT56_26415 IPR005064 Bordetella uptake gene APT56_26420 IPR029028 Alpha/beta knot methyltransferases APT56_26420 IPR001537 tRNA/rRNA methyltransferase, SpoU type APT56_26420 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase APT56_26420 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APT56_26430 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT56_26430 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC APT56_26430 IPR013216 Methyltransferase type 11 APT56_26435 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain APT56_26435 IPR011793 Putative glutamate--cysteine ligase YbdK APT56_26435 IPR006336 Glutamate--cysteine ligase, GCS2 APT56_26440 IPR003445 Cation transporter APT56_26440 IPR004772 TrkH potassium transport family APT56_26445 IPR006036 Potassium uptake protein TrkA APT56_26445 IPR036291 NAD(P)-binding domain superfamily APT56_26445 IPR006037 Regulator of K+ conductance, C-terminal APT56_26445 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily APT56_26445 IPR003148 Regulator of K+ conductance, N-terminal APT56_26450 IPR011006 CheY-like superfamily APT56_26450 IPR002197 DNA binding HTH domain, Fis-type APT56_26450 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_26450 IPR003593 AAA+ ATPase domain APT56_26450 IPR009057 Homeobox-like domain superfamily APT56_26450 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 APT56_26450 IPR002078 RNA polymerase sigma factor 54 interaction domain APT56_26450 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 APT56_26450 IPR001789 Signal transduction response regulator, receiver domain APT56_26450 IPR025944 Sigma-54 interaction domain, conserved site APT56_26455 IPR003660 HAMP domain APT56_26455 IPR003594 Histidine kinase/HSP90-like ATPase APT56_26455 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APT56_26455 IPR005467 Histidine kinase domain APT56_26455 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain APT56_26455 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily APT56_26455 IPR000014 PAS domain APT56_26455 IPR035965 PAS domain superfamily APT56_26455 IPR013767 PAS fold APT56_26455 IPR004358 Signal transduction histidine kinase-related protein, C-terminal APT56_26455 IPR017232 Signal transduction histidine kinase, nitrogen fixation and metabolism regulator APT56_26465 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT56_26465 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site APT56_26465 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type APT56_26465 IPR035926 NusB-like superfamily APT56_26465 IPR006027 NusB/RsmB/TIM44 APT56_26465 IPR023267 RNA (C5-cytosine) methyltransferase APT56_26465 IPR004573 rRNA small subunit methyltransferase B APT56_26470 IPR004778 Homoserine/Threonine efflux protein APT56_26470 IPR001123 Amino acid exporter protein, LeuE-type APT56_26475 IPR005839 Methylthiotransferase APT56_26475 IPR006638 Elp3/MiaB/NifB APT56_26475 IPR002792 TRAM domain APT56_26475 IPR023404 Radical SAM, alpha/beta horseshoe APT56_26475 IPR007197 Radical SAM APT56_26475 IPR038135 Methylthiotransferase, N-terminal domain superfamily APT56_26475 IPR020612 Methylthiotransferase, conserved site APT56_26475 IPR013848 Methylthiotransferase, N-terminal APT56_26475 IPR041582 RimO, TRAM domain APT56_26475 IPR005840 Ribosomal protein S12 methylthiotransferase RimO APT56_26480 IPR000390 Small multidrug resistance protein family APT56_26485 IPR002577 Helix-turn-helix, HxlR type APT56_26485 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_26485 IPR036390 Winged helix DNA-binding domain superfamily APT56_26495 IPR031100 LOG family APT56_26495 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG APT56_26505 IPR023214 HAD superfamily APT56_26505 IPR036412 HAD-like superfamily APT56_26505 IPR041492 Haloacid dehalogenase-like hydrolase APT56_26505 IPR023198 Phosphoglycolate phosphatase-like, domain 2 APT56_26505 IPR006439 HAD hydrolase, subfamily IA APT56_26515 IPR005794 Methionyl-tRNA formyltransferase APT56_26515 IPR037022 Formyl transferase, C-terminal domain superfamily APT56_26515 IPR002376 Formyl transferase, N-terminal APT56_26515 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain APT56_26515 IPR005793 Formyl transferase, C-terminal APT56_26515 IPR036477 Formyl transferase, N-terminal domain superfamily APT56_26515 IPR011034 Formyl transferase-like, C-terminal domain superfamily APT56_26515 IPR001555 Phosphoribosylglycinamide formyltransferase, active site APT56_26520 IPR023635 Peptide deformylase APT56_26520 IPR036821 Peptide deformylase superfamily APT56_26525 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_26525 IPR041614 DprA, winged helix domain APT56_26525 IPR003488 DNA recombination-mediator protein A APT56_26530 IPR000891 Pyruvate carboxyltransferase APT56_26530 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site APT56_26530 IPR013785 Aldolase-type TIM barrel APT56_26540 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APT56_26540 IPR018313 Solute-binding protein family 3, conserved site APT56_26540 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter APT56_26545 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APT56_26545 IPR004839 Aminotransferase, class I/classII APT56_26545 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APT56_26545 IPR015424 Pyridoxal phosphate-dependent transferase APT56_26550 IPR011078 Pyridoxal phosphate homeostasis protein APT56_26550 IPR029066 PLP-binding barrel APT56_26550 IPR001608 Alanine racemase, N-terminal APT56_26555 IPR042100 Bordetella uptake gene, domain 1 APT56_26555 IPR005064 Bordetella uptake gene APT56_26575 IPR038110 Threonine dehydratase, ACT-like domain superfamily APT56_26575 IPR001721 Threonine dehydratase, ACT-like domain APT56_26575 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme APT56_26575 IPR005787 Threonine dehydratase, biosynthetic APT56_26575 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site APT56_26575 IPR001926 Pyridoxal-phosphate dependent enzyme APT56_26580 IPR033900 Porin domain, Gram-negative type APT56_26580 IPR023614 Porin domain superfamily APT56_26580 IPR002299 Porin, Neisseria sp. type APT56_26580 IPR001702 Porin, Gram-negative type APT56_26590 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_26590 IPR036390 Winged helix DNA-binding domain superfamily APT56_26590 IPR000847 Transcription regulator HTH, LysR APT56_26590 IPR005119 LysR, substrate-binding APT56_26595 IPR005764 Adenine phosphoribosyl transferase APT56_26595 IPR000836 Phosphoribosyltransferase domain APT56_26595 IPR029057 Phosphoribosyltransferase-like APT56_26600 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_26600 IPR017871 ABC transporter, conserved site APT56_26600 IPR003439 ABC transporter-like APT56_26600 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC APT56_26600 IPR036640 ABC transporter type 1, transmembrane domain superfamily APT56_26600 IPR011527 ABC transporter type 1, transmembrane domain APT56_26600 IPR003593 AAA+ ATPase domain APT56_26605 IPR036640 ABC transporter type 1, transmembrane domain superfamily APT56_26605 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_26605 IPR003593 AAA+ ATPase domain APT56_26605 IPR003439 ABC transporter-like APT56_26605 IPR011527 ABC transporter type 1, transmembrane domain APT56_26605 IPR039421 Type I protein exporter APT56_26605 IPR017871 ABC transporter, conserved site APT56_26605 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD APT56_26610 IPR012994 Membrane bound YbgT-like APT56_26610 IPR011724 Cyd operon protein YbgT APT56_26615 IPR003317 Cytochrome ubiquinol oxidase subunit 2 APT56_26620 IPR002585 Cytochrome ubiquinol oxidase subunit 1 APT56_26630 IPR011054 Rudiment single hybrid motif APT56_26630 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase APT56_26630 IPR013815 ATP-grasp fold, subdomain 1 APT56_26630 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type APT56_26630 IPR011761 ATP-grasp fold APT56_26630 IPR016185 Pre-ATP-grasp domain superfamily APT56_26635 IPR000644 CBS domain APT56_26635 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type APT56_26635 IPR035474 KpsF-like, SIS domain APT56_26635 IPR001347 Sugar isomerase (SIS) APT56_26640 IPR023214 HAD superfamily APT56_26640 IPR010023 KdsC family APT56_26640 IPR036412 HAD-like superfamily APT56_26640 IPR006549 HAD-superfamily hydrolase,subfamily IIIA APT56_26655 IPR003593 AAA+ ATPase domain APT56_26655 IPR003439 ABC transporter-like APT56_26655 IPR017871 ABC transporter, conserved site APT56_26655 IPR030921 LPS export ABC transporter, ATP-binding protein LptB APT56_26655 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_26660 IPR003489 Ribosome hibernation promoting factor/RaiA APT56_26660 IPR036567 Ribosome hibernation promotion factor-like APT56_26665 IPR016152 Phosphotransferase/anion transporter APT56_26665 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN APT56_26665 IPR002178 PTS EIIA type-2 domain APT56_26670 IPR011104 HPr kinase/phosphorylase, C-terminal APT56_26670 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal APT56_26670 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily APT56_26670 IPR003755 HPr(Ser) kinase/phosphorylase APT56_26675 IPR004839 Aminotransferase, class I/classII APT56_26675 IPR015424 Pyridoxal phosphate-dependent transferase APT56_26675 IPR000524 Transcription regulator HTH, GntR APT56_26675 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APT56_26675 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APT56_26675 IPR036390 Winged helix DNA-binding domain superfamily APT56_26675 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_26680 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit APT56_26680 IPR008168 Cytochrome c, class IC APT56_26680 IPR036909 Cytochrome c-like domain superfamily APT56_26680 IPR009056 Cytochrome c-like domain APT56_26690 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_26690 IPR005337 RapZ-like family APT56_26695 IPR036680 Sporulation-like domain superfamily APT56_26695 IPR012997 Rare lipoprotein A APT56_26695 IPR036908 RlpA-like domain superfamily APT56_26695 IPR009009 RlpA-like protein, double-psi beta-barrel domain APT56_26695 IPR034718 Endolytic peptidoglycan transglycosylase RlpA APT56_26695 IPR007730 Sporulation-like domain APT56_26700 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily APT56_26700 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site APT56_26700 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding APT56_26700 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain APT56_26700 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain APT56_26700 IPR023546 Methylated-DNA--protein-cysteine methyltransferase APT56_26700 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_26705 IPR000878 Tetrapyrrole methylase APT56_26705 IPR014777 Tetrapyrrole methylase, subdomain 1 APT56_26705 IPR014776 Tetrapyrrole methylase, subdomain 2 APT56_26705 IPR008189 rRNA small subunit methyltransferase I APT56_26705 IPR018063 SAM-dependent methyltransferase RsmI, conserved site APT56_26705 IPR035996 Tetrapyrrole methylase superfamily APT56_26710 IPR003509 Uncharacterised protein family UPF0102 APT56_26710 IPR011856 tRNA endonuclease-like domain superfamily APT56_26710 IPR011335 Restriction endonuclease type II-like APT56_26715 IPR035461 GmhA/DiaA APT56_26715 IPR004515 Phosphoheptose isomerase APT56_26715 IPR001347 Sugar isomerase (SIS) APT56_26720 IPR007055 BON domain APT56_26720 IPR014004 Transport-associated and nodulation domain, bacteria APT56_26725 IPR036249 Thioredoxin-like superfamily APT56_26725 IPR013766 Thioredoxin domain APT56_26725 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant APT56_26730 IPR004872 Lipoprotein NlpA family APT56_26735 IPR004662 Acetylglutamate kinase family APT56_26735 IPR041727 N-Acetyl-L-glutamate kinase, cyclic APT56_26735 IPR001057 Glutamate/acetylglutamate kinase APT56_26735 IPR001048 Aspartate/glutamate/uridylate kinase APT56_26735 IPR037528 Acetylglutamate kinase ArgB APT56_26735 IPR036393 Acetylglutamate kinase-like superfamily APT56_26745 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily APT56_26745 IPR023769 Nucleoid occlusion factor SlmA APT56_26745 IPR001647 DNA-binding HTH domain, TetR-type APT56_26745 IPR009057 Homeobox-like domain superfamily APT56_26750 IPR001898 Solute carrier family 13 APT56_26750 IPR030676 Citrate carrier CitT-related APT56_26755 IPR003767 Malate/L-lactate dehydrogenase-like APT56_26755 IPR036111 Malate/L-sulfolactate/L-lactate dehydrogenase-like superfamily APT56_26760 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB APT56_26760 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA APT56_26760 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site APT56_26765 IPR017790 Penicillin-binding protein 2 APT56_26765 IPR012338 Beta-lactamase/transpeptidase-like APT56_26765 IPR005311 Penicillin-binding protein, dimerisation domain APT56_26765 IPR001460 Penicillin-binding protein, transpeptidase APT56_26765 IPR036138 Penicillin-binding protein, dimerisation domain superfamily APT56_26775 IPR007221 Rod shape-determining protein MreC APT56_26775 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 APT56_26775 IPR042177 Cell/Rod shape-determining protein MreC, domain 1 APT56_26780 IPR004753 Cell shape determining protein MreB APT56_26785 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C APT56_26785 IPR003837 Glu-tRNAGln amidotransferase C subunit APT56_26790 IPR000120 Amidase APT56_26790 IPR023631 Amidase signature domain APT56_26790 IPR036928 Amidase signature (AS) superfamily APT56_26790 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit APT56_26790 IPR020556 Amidase, conserved site APT56_26795 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E APT56_26795 IPR042114 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 1 APT56_26795 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic APT56_26795 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like APT56_26795 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site APT56_26795 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain APT56_26795 IPR018027 Asn/Gln amidotransferase APT56_26795 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit APT56_26795 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 APT56_26805 IPR029057 Phosphoribosyltransferase-like APT56_26805 IPR000836 Phosphoribosyltransferase domain APT56_26805 IPR004467 Orotate phosphoribosyl transferase domain APT56_26805 IPR023031 Orotate phosphoribosyltransferase APT56_26810 IPR036691 Endonuclease/exonuclease/phosphatase superfamily APT56_26810 IPR005135 Endonuclease/exonuclease/phosphatase APT56_26810 IPR020848 AP endonuclease 1, conserved site APT56_26810 IPR004808 AP endonuclease 1 APT56_26810 IPR020847 AP endonuclease 1, binding site APT56_26815 IPR033922 NAD(P) binding domain of glutamate dehydrogenase APT56_26815 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase APT56_26815 IPR036291 NAD(P)-binding domain superfamily APT56_26815 IPR014362 Glutamate dehydrogenase APT56_26815 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain APT56_26815 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal APT56_26815 IPR033524 Leu/Phe/Val dehydrogenases active site APT56_26825 IPR036390 Winged helix DNA-binding domain superfamily APT56_26825 IPR017685 HTH-type transcriptional regulator ArgP APT56_26825 IPR005119 LysR, substrate-binding APT56_26825 IPR000847 Transcription regulator HTH, LysR APT56_26825 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_26840 IPR036390 Winged helix DNA-binding domain superfamily APT56_26840 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_26840 IPR000847 Transcription regulator HTH, LysR APT56_26840 IPR005119 LysR, substrate-binding APT56_26845 IPR028082 Periplasmic binding protein-like I APT56_26845 IPR000709 Leu/Ile/Val-binding protein APT56_26845 IPR028081 Leucine-binding protein domain APT56_26855 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal APT56_26855 IPR017871 ABC transporter, conserved site APT56_26855 IPR003439 ABC transporter-like APT56_26855 IPR003593 AAA+ ATPase domain APT56_26855 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_26860 IPR003439 ABC transporter-like APT56_26860 IPR017871 ABC transporter, conserved site APT56_26860 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_26860 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein APT56_26860 IPR003593 AAA+ ATPase domain APT56_26865 IPR036102 OsmC/Ohr superfamily APT56_26865 IPR003718 OsmC/Ohr family APT56_26865 IPR019953 Organic hydroperoxide resistance protein famiy APT56_26865 IPR015946 K homology domain-like, alpha/beta APT56_26870 IPR036390 Winged helix DNA-binding domain superfamily APT56_26870 IPR000835 MarR-type HTH domain APT56_26870 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_26880 IPR000873 AMP-dependent synthetase/ligase APT56_26880 IPR020845 AMP-binding, conserved site APT56_26880 IPR042099 AMP-dependent synthetase-like superfamily APT56_26890 IPR001851 ABC transporter, permease APT56_26905 IPR017871 ABC transporter, conserved site APT56_26905 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein APT56_26905 IPR003439 ABC transporter-like APT56_26905 IPR003593 AAA+ ATPase domain APT56_26905 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_26910 IPR011880 Phenylacetate-CoA ligase APT56_26910 IPR042099 AMP-dependent synthetase-like superfamily APT56_26910 IPR000873 AMP-dependent synthetase/ligase APT56_26910 IPR028154 AMP-dependent ligase, C-terminal APT56_26925 IPR007272 Sulphur transport domain APT56_26930 IPR011991 ArsR-like helix-turn-helix domain APT56_26930 IPR001845 HTH ArsR-type DNA-binding domain APT56_26930 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_26930 IPR036390 Winged helix DNA-binding domain superfamily APT56_26935 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like APT56_26935 IPR001279 Metallo-beta-lactamase APT56_26940 IPR022488 Polyphosphate kinase-2-related APT56_26940 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_26940 IPR022489 Polyphosphate:AMP phosphotransferase APT56_26955 IPR001296 Glycosyl transferase, family 1 APT56_26955 IPR017814 Mycothiol biosynthesis protein, MshA APT56_26955 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain APT56_26960 IPR023171 Na/H antiporter domain superfamily APT56_26960 IPR004670 Na+/H+ antiporter NhaA APT56_26965 IPR007438 Protein of unknown function DUF488 APT56_26980 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain APT56_26985 IPR020904 Short-chain dehydrogenase/reductase, conserved site APT56_26985 IPR011294 3-hydroxybutyrate dehydrogenase APT56_26985 IPR036291 NAD(P)-binding domain superfamily APT56_26985 IPR002347 Short-chain dehydrogenase/reductase SDR APT56_26990 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase APT56_26990 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase APT56_26990 IPR013785 Aldolase-type TIM barrel APT56_26990 IPR029056 Ribokinase-like APT56_26990 IPR016084 Haem oxygenase-like, multi-helical APT56_26990 IPR022998 Thiamine phosphate synthase/TenI APT56_26990 IPR004305 Thiaminase-2/PQQC APT56_26990 IPR036206 Thiamin phosphate synthase superfamily APT56_26990 IPR034291 Thiamine phosphate synthase APT56_27010 IPR034746 POTRA domain APT56_27010 IPR027282 Two partner secretion pathway transporter APT56_27010 IPR035251 ShlB, POTRA domain APT56_27010 IPR005565 Haemolysin activator HlyB, C-terminal APT56_27010 IPR013686 Polypeptide-transport-associated, ShlB-type APT56_27015 IPR002043 Uracil-DNA glycosylase family 1 APT56_27015 IPR036895 Uracil-DNA glycosylase-like domain superfamily APT56_27015 IPR005122 Uracil-DNA glycosylase-like APT56_27015 IPR018085 Uracil-DNA glycosylase, active site APT56_27020 IPR011545 DEAD/DEAH box helicase domain APT56_27020 IPR014001 Helicase superfamily 1/2, ATP-binding domain APT56_27020 IPR001650 Helicase, C-terminal APT56_27020 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_27020 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site APT56_27020 IPR028622 ATP-dependent RNA helicase RhlE APT56_27020 IPR014014 RNA helicase, DEAD-box type, Q motif APT56_27030 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain APT56_27030 IPR002646 Poly A polymerase, head domain APT56_27030 IPR012006 tRNA nucleotidyltransferase, proteobacteria APT56_27035 IPR000189 Prokaryotic transglycosylase, active site APT56_27035 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily APT56_27035 IPR012289 Lytic transglycosylase, superhelical linker APT56_27035 IPR008939 Lytic transglycosylase, superhelical U-shaped APT56_27035 IPR008258 Transglycosylase SLT domain 1 APT56_27035 IPR023346 Lysozyme-like domain superfamily APT56_27040 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily APT56_27040 IPR037171 NagB/RpiA transferase-like APT56_27040 IPR002698 5-formyltetrahydrofolate cyclo-ligase APT56_27045 IPR016450 Uncharacterised conserved protein UCP005522 APT56_27045 IPR025841 Circularly permuted ATP-grasp type 2 APT56_27055 IPR038765 Papain-like cysteine peptidase superfamily APT56_27055 IPR013589 Bacterial transglutaminase-like, N-terminal APT56_27055 IPR002931 Transglutaminase-like APT56_27065 IPR042100 Bordetella uptake gene, domain 1 APT56_27065 IPR005064 Bordetella uptake gene APT56_27070 IPR004620 5,10-methylenetetrahydrofolate reductase APT56_27070 IPR003171 Methylenetetrahydrofolate reductase APT56_27070 IPR029041 FAD-linked oxidoreductase-like APT56_27075 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV APT56_27080 IPR042172 Adenosylhomocysteinase-like superfamily APT56_27080 IPR000043 Adenosylhomocysteinase-like APT56_27080 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site APT56_27080 IPR036291 NAD(P)-binding domain superfamily APT56_27080 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain APT56_27085 IPR001296 Glycosyl transferase, family 1 APT56_27085 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain APT56_27085 IPR017814 Mycothiol biosynthesis protein, MshA APT56_27095 IPR029058 Alpha/Beta hydrolase fold APT56_27095 IPR000073 Alpha/beta hydrolase fold-1 APT56_27095 IPR000639 Epoxide hydrolase-like APT56_27100 IPR004431 3-isopropylmalate dehydratase, small subunit APT56_27100 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel APT56_27100 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain APT56_27100 IPR033940 3-isopropylmalate dehydratase, swivel domain APT56_27105 IPR033941 3-Isopropylmalate dehydratase, catalytic domain APT56_27105 IPR004430 3-isopropylmalate dehydratase, large subunit APT56_27105 IPR018136 Aconitase family, 4Fe-4S cluster binding site APT56_27105 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain APT56_27105 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 APT56_27105 IPR036008 Aconitase, iron-sulfur domain APT56_27110 IPR042100 Bordetella uptake gene, domain 1 APT56_27110 IPR005064 Bordetella uptake gene APT56_27115 IPR005119 LysR, substrate-binding APT56_27115 IPR000847 Transcription regulator HTH, LysR APT56_27115 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_27115 IPR036390 Winged helix DNA-binding domain superfamily APT56_27120 IPR012349 FMN-binding split barrel APT56_27120 IPR002563 Flavin reductase like domain APT56_27135 IPR028081 Leucine-binding protein domain APT56_27135 IPR000709 Leu/Ile/Val-binding protein APT56_27135 IPR028082 Periplasmic binding protein-like I APT56_27145 IPR003593 AAA+ ATPase domain APT56_27145 IPR003439 ABC transporter-like APT56_27145 IPR017871 ABC transporter, conserved site APT56_27145 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_27145 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein APT56_27155 IPR005829 Sugar transporter, conserved site APT56_27155 IPR005828 Major facilitator, sugar transporter-like APT56_27155 IPR036259 MFS transporter superfamily APT56_27155 IPR020846 Major facilitator superfamily domain APT56_27155 IPR004736 MFS transporter, metabolite:H symporter APT56_27160 IPR000120 Amidase APT56_27160 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit APT56_27160 IPR036928 Amidase signature (AS) superfamily APT56_27160 IPR023631 Amidase signature domain APT56_27160 IPR020556 Amidase, conserved site APT56_27165 IPR022630 S-adenosylmethionine synthetase, C-terminal APT56_27165 IPR022628 S-adenosylmethionine synthetase, N-terminal APT56_27165 IPR022631 S-adenosylmethionine synthetase, conserved site APT56_27165 IPR022629 S-adenosylmethionine synthetase, central domain APT56_27165 IPR002133 S-adenosylmethionine synthetase APT56_27165 IPR022636 S-adenosylmethionine synthetase superfamily APT56_27175 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase APT56_27175 IPR004960 Bacterial lipid A biosynthesis acyltransferase APT56_27180 IPR001653 Diaminopimelate epimerase, DapF APT56_27180 IPR018510 Diaminopimelate epimerase, active site APT56_27190 IPR013762 Integrase-like, catalytic domain superfamily APT56_27190 IPR002104 Integrase, catalytic domain APT56_27190 IPR010998 Integrase/recombinase, N-terminal APT56_27190 IPR011010 DNA breaking-rejoining enzyme, catalytic core APT56_27190 IPR004107 Integrase, SAM-like, N-terminal APT56_27190 IPR011931 Tyrosine recombinase XerC APT56_27190 IPR023009 Tyrosine recombinase XerC/XerD APT56_27195 IPR011541 Nickel/cobalt transporter, high-affinity APT56_27205 IPR006128 Adhesion lipoprotein APT56_27205 IPR006129 Adhesin B APT56_27205 IPR006127 Periplasmic solute binding protein, ZnuA-like APT56_27210 IPR001626 ABC transporter, TroCD-like APT56_27210 IPR037294 ABC transporter, BtuC-like APT56_27215 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_27215 IPR003439 ABC transporter-like APT56_27215 IPR017871 ABC transporter, conserved site APT56_27215 IPR003593 AAA+ ATPase domain APT56_27220 IPR002481 Ferric-uptake regulator APT56_27220 IPR036390 Winged helix DNA-binding domain superfamily APT56_27220 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_27225 IPR036627 CobW-like, C-terminal domain superfamily APT56_27225 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal APT56_27225 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_27225 IPR003495 CobW/HypB/UreG, nucleotide-binding domain APT56_27230 IPR000962 Zinc finger, DksA/TraR C4-type APT56_27230 IPR037187 DksA, N-terminal domain superfamily APT56_27230 IPR012784 RNA polymerase-binding transcription factor DksA APT56_27230 IPR020458 Zinc finger, DksA/TraR C4-type conserved site APT56_27235 IPR001353 Proteasome, subunit alpha/beta APT56_27235 IPR029055 Nucleophile aminohydrolases, N-terminal APT56_27235 IPR022281 ATP-dependent protease, HslV subunit APT56_27235 IPR023333 Proteasome B-type subunit APT56_27240 IPR003959 ATPase, AAA-type, core APT56_27240 IPR019489 Clp ATPase, C-terminal APT56_27240 IPR004491 Heat shock protein HslU APT56_27240 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_27240 IPR003593 AAA+ ATPase domain APT56_27250 IPR036451 Cobalamin adenosyltransferase-like superfamily APT56_27250 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type APT56_27250 IPR016030 Cobalamin adenosyltransferase-like APT56_27255 IPR003698 Lipoyl synthase APT56_27255 IPR013785 Aldolase-type TIM barrel APT56_27255 IPR006638 Elp3/MiaB/NifB APT56_27255 IPR031691 Lipoyl synthase, N-terminal APT56_27255 IPR007197 Radical SAM APT56_27260 IPR000843 LacI-type HTH domain APT56_27260 IPR028082 Periplasmic binding protein-like I APT56_27260 IPR010982 Lambda repressor-like, DNA-binding domain superfamily APT56_27270 IPR020605 Octanoyltransferase, conserved site APT56_27270 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain APT56_27270 IPR000544 Octanoyltransferase APT56_27275 IPR027471 YbeD-like domain superfamily APT56_27275 IPR007454 Uncharacterised protein family UPF0250 APT56_27280 IPR005784 D-amino acid aminotransferase APT56_27280 IPR001544 Aminotransferase class IV APT56_27280 IPR036038 Aminotransferase-like, PLP-dependent enzymes APT56_27280 IPR018300 Aminotransferase, class IV, conserved site APT56_27285 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal APT56_27285 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal APT56_27285 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A APT56_27285 IPR015956 Penicillin-binding protein, C-terminal domain superfamily APT56_27285 IPR012338 Beta-lactamase/transpeptidase-like APT56_27285 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily APT56_27305 IPR017871 ABC transporter, conserved site APT56_27305 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_27305 IPR003439 ABC transporter-like APT56_27305 IPR003593 AAA+ ATPase domain APT56_27305 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl APT56_27310 IPR003453 ABC transport permease subunit MlaE, Proteobacteria APT56_27310 IPR030802 ABC transporter permease MalE APT56_27320 IPR004619 Type III pantothenate kinase APT56_27325 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal APT56_27325 IPR039901 3-deoxy-D-manno-octulosonic acid transferase APT56_27325 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily APT56_27325 IPR001296 Glycosyl transferase, family 1 APT56_27330 IPR002201 Glycosyl transferase, family 9 APT56_27330 IPR011908 Lipopolysaccharide heptosyltransferase I APT56_27340 IPR016040 NAD(P)-binding domain APT56_27340 IPR005886 UDP-glucose 4-epimerase APT56_27340 IPR036291 NAD(P)-binding domain superfamily APT56_27345 IPR029044 Nucleotide-diphospho-sugar transferases APT56_27345 IPR001173 Glycosyltransferase 2-like APT56_27355 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain APT56_27355 IPR001296 Glycosyl transferase, family 1 APT56_27355 IPR023884 Colanic acid biosynthesis, glycosyl transferase, WcaL APT56_27365 IPR017871 ABC transporter, conserved site APT56_27365 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_27365 IPR003593 AAA+ ATPase domain APT56_27365 IPR003439 ABC transporter-like APT56_27375 IPR001296 Glycosyl transferase, family 1 APT56_27375 IPR017814 Mycothiol biosynthesis protein, MshA APT56_27375 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain APT56_27385 IPR000620 EamA domain APT56_27385 IPR022883 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase, subunit ArnE APT56_27385 IPR000390 Small multidrug resistance protein family APT56_27400 IPR011701 Major facilitator superfamily APT56_27400 IPR036259 MFS transporter superfamily APT56_27400 IPR020846 Major facilitator superfamily domain APT56_27400 IPR004638 Drug resistance transporter EmrB-like APT56_27410 IPR014710 RmlC-like jelly roll fold APT56_27410 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related APT56_27410 IPR011051 RmlC-like cupin domain superfamily APT56_27415 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form APT56_27415 IPR005835 Nucleotidyl transferase domain APT56_27415 IPR029044 Nucleotide-diphospho-sugar transferases APT56_27420 IPR036291 NAD(P)-binding domain superfamily APT56_27420 IPR005888 dTDP-glucose 4,6-dehydratase APT56_27420 IPR016040 NAD(P)-binding domain APT56_27425 IPR030872 Cardiolipin synthase B APT56_27425 IPR025202 Phospholipase D-like domain APT56_27425 IPR001736 Phospholipase D/Transphosphatidylase APT56_27430 IPR036691 Endonuclease/exonuclease/phosphatase superfamily APT56_27430 IPR005135 Endonuclease/exonuclease/phosphatase APT56_27435 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type APT56_27435 IPR006195 Aminoacyl-tRNA synthetase, class II APT56_27435 IPR004524 Aspartate-tRNA ligase, type 1 APT56_27435 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb APT56_27435 IPR004115 GAD-like domain superfamily APT56_27435 IPR029351 GAD domain APT56_27435 IPR012340 Nucleic acid-binding, OB-fold APT56_27435 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) APT56_27460 IPR016039 Thiolase-like APT56_27460 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal APT56_27460 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 APT56_27460 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III APT56_27475 IPR020625 Schiff base-forming aldolase, active site APT56_27475 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA APT56_27475 IPR020624 Schiff base-forming aldolase, conserved site APT56_27475 IPR002220 DapA-like APT56_27475 IPR013785 Aldolase-type TIM barrel APT56_27480 IPR029016 GAF-like domain superfamily APT56_27480 IPR003018 GAF domain APT56_27480 IPR000614 Free Met sulfoxide reductase conserved site APT56_27485 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APT56_27485 IPR004839 Aminotransferase, class I/classII APT56_27485 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APT56_27485 IPR015424 Pyridoxal phosphate-dependent transferase APT56_27490 IPR006370 4-hydroxybenzoate polyprenyltransferase-like APT56_27490 IPR039653 Prenyltransferase APT56_27490 IPR000537 UbiA prenyltransferase family APT56_27490 IPR030470 UbiA prenyltransferase conserved site APT56_27495 IPR009468 Protein of unknown function DUF1090 APT56_27510 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_27510 IPR000524 Transcription regulator HTH, GntR APT56_27510 IPR036390 Winged helix DNA-binding domain superfamily APT56_27510 IPR008920 Transcription regulator FadR/GntR, C-terminal APT56_27510 IPR011711 GntR, C-terminal APT56_27515 IPR011076 Malate synthase-like superfamily APT56_27515 IPR006253 Malate synthase G APT56_27515 IPR023310 Malate synthase G, beta sub-domain APT56_27515 IPR001465 Malate synthase APT56_27545 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT56_27545 IPR013216 Methyltransferase type 11 APT56_27550 IPR000424 Primosome PriB/single-strand DNA-binding APT56_27550 IPR012340 Nucleic acid-binding, OB-fold APT56_27550 IPR011344 Single-stranded DNA-binding protein APT56_27555 IPR011701 Major facilitator superfamily APT56_27555 IPR020846 Major facilitator superfamily domain APT56_27555 IPR036259 MFS transporter superfamily APT56_27560 IPR041552 UvrA DNA-binding domain APT56_27560 IPR017871 ABC transporter, conserved site APT56_27560 IPR041102 UvrA, interaction domain APT56_27560 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_27560 IPR004602 UvrABC system subunit A APT56_27560 IPR003439 ABC transporter-like APT56_27565 IPR034333 Glutathione S-transferases, class Zeta , N-terminal APT56_27565 IPR010987 Glutathione S-transferase, C-terminal-like APT56_27565 IPR036282 Glutathione S-transferase, C-terminal domain superfamily APT56_27565 IPR040079 Glutathione Transferase family APT56_27565 IPR004045 Glutathione S-transferase, N-terminal APT56_27565 IPR004046 Glutathione S-transferase, C-terminal APT56_27565 IPR005955 Glutathione S-transferases, class Zeta APT56_27565 IPR034330 Glutathione S-transferases, class Zeta , C-terminal APT56_27565 IPR036249 Thioredoxin-like superfamily APT56_27570 IPR026875 Phosphohydrolase-associated domain APT56_27570 IPR006674 HD domain APT56_27570 IPR003607 HD/PDEase domain APT56_27570 IPR023023 dNTP triphosphohydrolase, type 2 APT56_27570 IPR006261 dNTP triphosphohydrolase APT56_27575 IPR030960 3-dehydroquinate synthase domain APT56_27575 IPR016037 3-dehydroquinate synthase AroB APT56_27575 IPR030963 3-dehydroquinate synthase family APT56_27580 IPR023000 Shikimate kinase, conserved site APT56_27580 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_27580 IPR031322 Shikimate kinase/gluconokinase APT56_27580 IPR000623 Shikimate kinase/Threonine synthase-like 1 APT56_27585 IPR001460 Penicillin-binding protein, transpeptidase APT56_27585 IPR012338 Beta-lactamase/transpeptidase-like APT56_27585 IPR036950 Penicillin binding protein transglycosylase domain APT56_27585 IPR001264 Glycosyl transferase, family 51 APT56_27585 IPR023346 Lysozyme-like domain superfamily APT56_27585 IPR031376 Penicillin-binding protein, OB-like domain APT56_27595 IPR036397 Ribonuclease H superfamily APT56_27595 IPR012337 Ribonuclease H-like superfamily APT56_27595 IPR001584 Integrase, catalytic core APT56_27595 IPR025948 HTH-like domain APT56_27600 IPR020895 Frataxin conserved site APT56_27600 IPR002908 Frataxin/CyaY APT56_27600 IPR036524 Frataxin/CyaY superfamily APT56_27610 IPR029066 PLP-binding barrel APT56_27610 IPR000183 Ornithine/DAP/Arg decarboxylase APT56_27610 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site APT56_27610 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal APT56_27610 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal APT56_27610 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal APT56_27610 IPR002986 Diaminopimelate decarboxylase, LysA APT56_27610 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site APT56_27620 IPR023494 Cytochrome c biogenesis protein Ccs1/CcsB APT56_27620 IPR007816 ResB-like domain APT56_27630 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_27630 IPR030393 EngB-type guanine nucleotide-binding (G) domain APT56_27630 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC APT56_27630 IPR006073 GTP binding domain APT56_27635 IPR013785 Aldolase-type TIM barrel APT56_27635 IPR001731 Delta-aminolevulinic acid dehydratase APT56_27635 IPR030656 Delta-aminolevulinic acid dehydratase, active site APT56_27645 IPR003834 Cytochrome C biogenesis protein, transmembrane domain APT56_27645 IPR035671 DsbD gamma APT56_27645 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain APT56_27645 IPR017937 Thioredoxin, conserved site APT56_27645 IPR036249 Thioredoxin-like superfamily APT56_27645 IPR013766 Thioredoxin domain APT56_27645 IPR022910 Thiol:disulphide interchange protein DsbD APT56_27645 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily APT56_27650 IPR004323 Divalent ion tolerance protein, CutA APT56_27650 IPR011322 Nitrogen regulatory PII-like, alpha/beta APT56_27650 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal APT56_27655 IPR011146 HIT-like domain APT56_27655 IPR036265 HIT-like superfamily APT56_27655 IPR001310 Histidine triad (HIT) protein APT56_27655 IPR019808 Histidine triad, conserved site APT56_27660 IPR036373 Ribosomal protein L17 superfamily APT56_27660 IPR000456 Ribosomal protein L17 APT56_27665 IPR011262 DNA-directed RNA polymerase, insert domain APT56_27665 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type APT56_27665 IPR011773 DNA-directed RNA polymerase, alpha subunit APT56_27665 IPR036603 RNA polymerase, RBP11-like subunit APT56_27665 IPR011260 RNA polymerase, alpha subunit, C-terminal APT56_27665 IPR036643 DNA-directed RNA polymerase, insert domain superfamily APT56_27670 IPR001912 Ribosomal protein S4/S9, N-terminal APT56_27670 IPR005709 Ribosomal protein S4, bacterial-type APT56_27670 IPR018079 Ribosomal protein S4, conserved site APT56_27670 IPR002942 RNA-binding S4 domain APT56_27670 IPR036986 RNA-binding S4 domain superfamily APT56_27670 IPR022801 Ribosomal protein S4/S9 APT56_27675 IPR036967 Ribosomal protein S11 superfamily APT56_27675 IPR018102 Ribosomal S11, conserved site APT56_27675 IPR001971 Ribosomal protein S11 APT56_27675 IPR019981 Ribosomal protein S11, bacterial-type APT56_27680 IPR001892 Ribosomal protein S13 APT56_27680 IPR027437 30s ribosomal protein S13, C-terminal APT56_27680 IPR018269 Ribosomal protein S13, conserved site APT56_27680 IPR019980 Ribosomal protein S13, bacterial-type APT56_27680 IPR010979 Ribosomal protein S13-like, H2TH APT56_27685 IPR004368 Translation initiation factor IF-1 APT56_27685 IPR012340 Nucleic acid-binding, OB-fold APT56_27685 IPR006196 RNA-binding domain, S1, IF1 type APT56_27690 IPR023201 SecY domain superfamily APT56_27690 IPR030659 SecY conserved site APT56_27690 IPR002208 SecY/SEC61-alpha family APT56_27690 IPR026593 Protein translocase subunit SecY APT56_27695 IPR021131 Ribosomal protein L18e/L15P APT56_27695 IPR005749 Ribosomal protein L15, bacterial-type APT56_27695 IPR030878 Ribosomal protein L15 APT56_27695 IPR036227 Ribosomal L18e/L15P superfamily APT56_27700 IPR005996 Ribosomal protein L30, bacterial-type APT56_27700 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily APT56_27700 IPR018038 Ribosomal protein L30, conserved site APT56_27700 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain APT56_27705 IPR000851 Ribosomal protein S5 APT56_27705 IPR005712 Ribosomal protein S5, bacterial-type APT56_27705 IPR005324 Ribosomal protein S5, C-terminal APT56_27705 IPR020568 Ribosomal protein S5 domain 2-type fold APT56_27705 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APT56_27705 IPR018192 Ribosomal protein S5, N-terminal, conserved site APT56_27705 IPR013810 Ribosomal protein S5, N-terminal APT56_27710 IPR004389 Ribosomal protein L18, bacterial-type APT56_27710 IPR005484 Ribosomal protein L18 APT56_27715 IPR000702 Ribosomal protein L6 APT56_27715 IPR002358 Ribosomal protein L6, conserved site APT56_27715 IPR019906 Ribosomal protein L6, bacterial-type APT56_27715 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily APT56_27715 IPR020040 Ribosomal protein L6, alpha-beta domain APT56_27720 IPR035987 Ribosomal protein S8 superfamily APT56_27720 IPR000630 Ribosomal protein S8 APT56_27725 IPR001209 Ribosomal protein S14 APT56_27725 IPR023036 Ribosomal protein S14, bacterial/plastid APT56_27730 IPR031310 Ribosomal protein L5, N-terminal APT56_27730 IPR022803 Ribosomal protein L5 domain superfamily APT56_27730 IPR020929 Ribosomal protein L5, conserved site APT56_27730 IPR002132 Ribosomal protein L5 APT56_27730 IPR020930 Ribosomal protein L5, bacterial-type APT56_27730 IPR031309 Ribosomal protein L5, C-terminal APT56_27735 IPR008991 Translation protein SH3-like domain superfamily APT56_27735 IPR003256 Ribosomal protein L24 APT56_27735 IPR014722 Ribosomal protein L2, domain 2 APT56_27735 IPR041988 Ribosomal Protein L26/L24, KOW domain APT56_27735 IPR005825 Ribosomal protein L24/L26, conserved site APT56_27740 IPR005745 Ribosomal protein L14P, bacterial-type APT56_27740 IPR000218 Ribosomal protein L14P APT56_27740 IPR019972 Ribosomal protein L14P, conserved site APT56_27740 IPR036853 Ribosomal protein L14 superfamily APT56_27750 IPR016161 Aldehyde/histidinol dehydrogenase APT56_27750 IPR016163 Aldehyde dehydrogenase, C-terminal APT56_27750 IPR016162 Aldehyde dehydrogenase, N-terminal APT56_27750 IPR015590 Aldehyde dehydrogenase domain APT56_27760 IPR020449 Transcription regulator HTH, AraC- type APT56_27760 IPR018060 DNA binding HTH domain, AraC-type APT56_27760 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like APT56_27760 IPR037923 Transcription regulator HTH-like APT56_27760 IPR009057 Homeobox-like domain superfamily APT56_27765 IPR000073 Alpha/beta hydrolase fold-1 APT56_27765 IPR029058 Alpha/Beta hydrolase fold APT56_27765 IPR008220 Homoserine/serine acetyltransferase MetX-like APT56_27775 IPR003439 ABC transporter-like APT56_27775 IPR017871 ABC transporter, conserved site APT56_27775 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_27775 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal APT56_27775 IPR003593 AAA+ ATPase domain APT56_27780 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_27780 IPR017871 ABC transporter, conserved site APT56_27780 IPR003593 AAA+ ATPase domain APT56_27780 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein APT56_27780 IPR003439 ABC transporter-like APT56_27800 IPR012340 Nucleic acid-binding, OB-fold APT56_27800 IPR019984 30S ribosomal protein S17 APT56_27800 IPR000266 Ribosomal protein S17/S11 APT56_27800 IPR019979 Ribosomal protein S17, conserved site APT56_27805 IPR001854 Ribosomal protein L29/L35 APT56_27805 IPR036049 Ribosomal protein L29/L35 superfamily APT56_27805 IPR018254 Ribosomal protein L29, conserved site APT56_27810 IPR036920 Ribosomal protein L10e/L16 superfamily APT56_27810 IPR000114 Ribosomal protein L16 APT56_27810 IPR020798 Ribosomal protein L16, conserved site APT56_27810 IPR016180 Ribosomal protein L10e/L16 APT56_27815 IPR005704 Ribosomal protein S3, bacterial-type APT56_27815 IPR036419 Ribosomal protein S3, C-terminal domain superfamily APT56_27815 IPR001351 Ribosomal protein S3, C-terminal APT56_27815 IPR009019 K homology domain superfamily, prokaryotic type APT56_27815 IPR004044 K Homology domain, type 2 APT56_27815 IPR004087 K Homology domain APT56_27815 IPR018280 Ribosomal protein S3, conserved site APT56_27815 IPR015946 K homology domain-like, alpha/beta APT56_27820 IPR001063 Ribosomal protein L22/L17 APT56_27820 IPR018260 Ribosomal protein L22/L17, conserved site APT56_27820 IPR036394 Ribosomal protein L22/L17 superfamily APT56_27820 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type APT56_27825 IPR020934 Ribosomal protein S19 conserved site APT56_27825 IPR023575 Ribosomal protein S19, superfamily APT56_27825 IPR005732 Ribosomal protein S19, bacterial-type APT56_27825 IPR002222 Ribosomal protein S19/S15 APT56_27830 IPR012340 Nucleic acid-binding, OB-fold APT56_27830 IPR002171 Ribosomal protein L2 APT56_27830 IPR005880 Ribosomal protein L2, bacterial/organellar-type APT56_27830 IPR022669 Ribosomal protein L2, C-terminal APT56_27830 IPR022671 Ribosomal protein L2, conserved site APT56_27830 IPR014726 Ribosomal protein L2, domain 3 APT56_27830 IPR008991 Translation protein SH3-like domain superfamily APT56_27830 IPR022666 Ribosomal Proteins L2, RNA binding domain APT56_27830 IPR014722 Ribosomal protein L2, domain 2 APT56_27835 IPR013025 Ribosomal protein L25/L23 APT56_27835 IPR012678 Ribosomal protein L23/L15e core domain superfamily APT56_27835 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily APT56_27840 IPR013005 50S ribosomal protein uL4 APT56_27840 IPR023574 Ribosomal protein L4 domain superfamily APT56_27840 IPR002136 Ribosomal protein L4/L1e APT56_27845 IPR000597 Ribosomal protein L3 APT56_27845 IPR019927 Ribosomal protein L3, bacterial/organelle-type APT56_27845 IPR019926 Ribosomal protein L3, conserved site APT56_27845 IPR009000 Translation protein, beta-barrel domain superfamily APT56_27850 IPR027486 Ribosomal protein S10 domain APT56_27850 IPR001848 Ribosomal protein S10 APT56_27850 IPR018268 Ribosomal protein S10, conserved site APT56_27850 IPR036838 Ribosomal protein S10 domain superfamily APT56_27855 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_27855 IPR031157 Tr-type G domain, conserved site APT56_27855 IPR005225 Small GTP-binding protein domain APT56_27855 IPR033720 Elongation factor Tu, domain 2 APT56_27855 IPR004161 Translation elongation factor EFTu-like, domain 2 APT56_27855 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal APT56_27855 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle APT56_27855 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal APT56_27855 IPR009000 Translation protein, beta-barrel domain superfamily APT56_27855 IPR000795 Transcription factor, GTP-binding domain APT56_27855 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain APT56_27860 IPR005517 Translation elongation factor EFG/EF2, domain IV APT56_27860 IPR004540 Translation elongation factor EFG/EF2 APT56_27860 IPR009000 Translation protein, beta-barrel domain superfamily APT56_27860 IPR000795 Transcription factor, GTP-binding domain APT56_27860 IPR005225 Small GTP-binding protein domain APT56_27860 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APT56_27860 IPR020568 Ribosomal protein S5 domain 2-type fold APT56_27860 IPR004161 Translation elongation factor EFTu-like, domain 2 APT56_27860 IPR000640 Elongation factor EFG, domain V-like APT56_27860 IPR009022 Elongation factor G, domain III APT56_27860 IPR035649 EFG, domain V APT56_27860 IPR035647 EF-G domain III/V-like APT56_27860 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT56_27860 IPR041095 Elongation Factor G, domain II APT56_27860 IPR031157 Tr-type G domain, conserved site APT56_27865 IPR036823 Ribosomal protein S7 domain superfamily APT56_27865 IPR023798 Ribosomal protein S7 domain APT56_27865 IPR020606 Ribosomal protein S7, conserved site APT56_27865 IPR005717 Ribosomal protein S7, bacterial/organellar-type APT56_27865 IPR000235 Ribosomal protein S5/S7 APT56_27870 IPR006032 Ribosomal protein S12/S23 APT56_27870 IPR012340 Nucleic acid-binding, OB-fold APT56_27870 IPR005679 Ribosomal protein S12, bacterial-type APT56_27875 IPR011006 CheY-like superfamily APT56_27875 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_27875 IPR001867 OmpR/PhoB-type DNA-binding domain APT56_27875 IPR016032 Signal transduction response regulator, C-terminal effector APT56_27875 IPR001789 Signal transduction response regulator, receiver domain APT56_27875 IPR039420 Transcriptional regulatory protein WalR-like APT56_27880 IPR011006 CheY-like superfamily APT56_27880 IPR001789 Signal transduction response regulator, receiver domain APT56_27880 IPR001867 OmpR/PhoB-type DNA-binding domain APT56_27880 IPR036388 Winged helix-like DNA-binding domain superfamily APT56_27880 IPR039420 Transcriptional regulatory protein WalR-like APT56_27890 IPR031967 PhoR, single Cache-like domain APT56_27890 IPR004358 Signal transduction histidine kinase-related protein, C-terminal APT56_27890 IPR000014 PAS domain APT56_27890 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily APT56_27890 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain APT56_27890 IPR005467 Histidine kinase domain APT56_27890 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APT56_27890 IPR003594 Histidine kinase/HSP90-like ATPase APT56_27890 IPR035965 PAS domain superfamily APT56_27890 IPR013767 PAS fold