locus-tag class description E2544_00005 PF00308 Bacterial dnaA protein E2544_00005 PF11638 DnaA N-terminal domain E2544_00005 PF08299 Bacterial dnaA protein helix-turn-helix E2544_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain E2544_00010 PF02767 DNA polymerase III beta subunit, central domain E2544_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain E2544_00015 PF00204 DNA gyrase B E2544_00015 PF00986 DNA gyrase B subunit, carboxyl terminus E2544_00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2544_00015 PF01751 Toprim domain E2544_00015 PF18053 DNA gyrase B subunit insert domain E2544_00025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_00025 PF03466 LysR substrate binding domain E2544_00035 PF07690 Major Facilitator Superfamily E2544_00040 PF02678 Pirin E2544_00040 PF17954 Quercetinase C-terminal cupin domain E2544_00050 PF07969 Amidohydrolase family E2544_00060 PF00497 Bacterial extracellular solute-binding proteins, family 3 E2544_00065 PF00005 ABC transporter E2544_00070 PF01425 Amidase E2544_00075 PF06339 Ectoine synthase E2544_00090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_00090 PF03466 LysR substrate binding domain E2544_00100 PF01613 Flavin reductase like domain E2544_00115 PF02384 N-6 DNA Methylase E2544_00115 PF12161 HsdM N-terminal domain E2544_00130 PF18766 SWI2/SNF2 ATPase E2544_00130 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) E2544_00130 PF11867 Domain of unknown function (DUF3387) E2544_00140 PF03466 LysR substrate binding domain E2544_00140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_00145 PF00497 Bacterial extracellular solute-binding proteins, family 3 E2544_00150 PF00528 Binding-protein-dependent transport system inner membrane component E2544_00155 PF00528 Binding-protein-dependent transport system inner membrane component E2544_00160 PF00005 ABC transporter E2544_00165 PF01212 Beta-eliminating lyase E2544_00170 PF00892 EamA-like transporter family E2544_00175 PF00708 Acylphosphatase E2544_00185 PF01070 FMN-dependent dehydrogenase E2544_00200 PF07969 Amidohydrolase family E2544_00220 PF02608 ABC transporter substrate-binding protein PnrA-like E2544_00225 PF09335 SNARE associated Golgi protein E2544_00230 PF02558 Ketopantoate reductase PanE/ApbA E2544_00230 PF08546 Ketopantoate reductase PanE/ApbA C terminal E2544_00245 PF01613 Flavin reductase like domain E2544_00265 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase E2544_00275 PF01062 Bestrophin, RFP-TM, chloride channel E2544_00280 PF01037 Lrp/AsnC ligand binding domain E2544_00285 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E2544_00285 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain E2544_00285 PF00205 Thiamine pyrophosphate enzyme, central domain E2544_00295 PF00528 Binding-protein-dependent transport system inner membrane component E2544_00300 PF00005 ABC transporter E2544_00310 PF01751 Toprim domain E2544_00310 PF01131 DNA topoisomerase E2544_00320 PF00749 tRNA synthetases class I (E and Q), catalytic domain E2544_00325 PF04361 Protein of unknown function (DUF494) E2544_00335 PF16868 NMT1-like family E2544_00340 PF01168 Alanine racemase, N-terminal domain E2544_00340 PF14031 Putative serine dehydratase domain E2544_00360 PF00072 Response regulator receiver domain E2544_00360 PF00196 Bacterial regulatory proteins, luxR family E2544_00370 PF03401 Tripartite tricarboxylate transporter family receptor E2544_00375 PF00202 Aminotransferase class-III E2544_00390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_00390 PF03466 LysR substrate binding domain E2544_00400 PF03401 Tripartite tricarboxylate transporter family receptor E2544_00410 PF07715 TonB-dependent Receptor Plug Domain E2544_00410 PF00593 TonB dependent receptor E2544_00415 PF04773 FecR protein E2544_00415 PF16220 Domain of unknown function (DUF4880) E2544_00420 PF08281 Sigma-70, region 4 E2544_00420 PF04542 Sigma-70 region 2 E2544_00435 PF06803 Protein of unknown function (DUF1232) E2544_00470 PF07690 Major Facilitator Superfamily E2544_00475 PF07660 Secretin and TonB N terminus short domain E2544_00475 PF07715 TonB-dependent Receptor Plug Domain E2544_00475 PF00593 TonB dependent receptor E2544_00500 PF00528 Binding-protein-dependent transport system inner membrane component E2544_00505 PF00005 ABC transporter E2544_00520 PF03466 LysR substrate binding domain E2544_00520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_00525 PF03401 Tripartite tricarboxylate transporter family receptor E2544_00530 PF02515 CoA-transferase family III E2544_00550 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain E2544_00550 PF00364 Biotin-requiring enzyme E2544_00550 PF00289 Biotin carboxylase, N-terminal domain E2544_00550 PF02785 Biotin carboxylase C-terminal domain E2544_00555 PF01039 Carboxyl transferase domain E2544_00560 PF02803 Thiolase, C-terminal domain E2544_00560 PF00108 Thiolase, N-terminal domain E2544_00565 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) E2544_00570 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E2544_00570 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E2544_00570 PF02770 Acyl-CoA dehydrogenase, middle domain E2544_00575 PF07687 Peptidase dimerisation domain E2544_00575 PF01546 Peptidase family M20/M25/M40 E2544_00580 PF03401 Tripartite tricarboxylate transporter family receptor E2544_00585 PF02694 Uncharacterised BCR, YnfA/UPF0060 family E2544_00590 PF09278 MerR, DNA binding E2544_00590 PF00376 MerR family regulatory protein E2544_00600 PF01810 LysE type translocator E2544_00605 PF00881 Nitroreductase family E2544_00610 PF01053 Cys/Met metabolism PLP-dependent enzyme E2544_00625 PF00085 Thioredoxin E2544_00625 PF01323 DSBA-like thioredoxin domain E2544_00635 PF00750 tRNA synthetases class I (R) E2544_00635 PF03485 Arginyl tRNA synthetase N terminal domain E2544_00635 PF05746 DALR anticodon binding domain E2544_00650 PF00528 Binding-protein-dependent transport system inner membrane component E2544_00655 PF00528 Binding-protein-dependent transport system inner membrane component E2544_00660 PF13416 Bacterial extracellular solute-binding protein E2544_00665 PF17912 MalK OB fold domain E2544_00665 PF00005 ABC transporter E2544_00670 PF00149 Calcineurin-like phosphoesterase E2544_00675 PF00356 Bacterial regulatory proteins, lacI family E2544_00680 PF01425 Amidase E2544_00685 PF00682 HMGL-like E2544_00685 PF08502 LeuA allosteric (dimerisation) domain E2544_00695 PF04552 Sigma-54, DNA binding domain E2544_00695 PF04963 Sigma-54 factor, core binding domain E2544_00695 PF00309 Sigma-54 factor, Activator interacting domain (AID) E2544_00705 PF03466 LysR substrate binding domain E2544_00705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_00715 PF00210 Ferritin-like domain E2544_00725 PF00009 Elongation factor Tu GTP binding domain E2544_00725 PF03144 Elongation factor Tu domain 2 E2544_00725 PF16658 Class II release factor RF3, C-terminal domain E2544_00730 PF01810 LysE type translocator E2544_00735 PF00270 DEAD/DEAH box helicase E2544_00735 PF00271 Helicase conserved C-terminal domain E2544_00740 PF06097 Bacterial protein of unknown function (DUF945) E2544_00750 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E2544_00750 PF00005 ABC transporter E2544_00755 PF00528 Binding-protein-dependent transport system inner membrane component E2544_00755 PF12911 N-terminal TM domain of oligopeptide transport permease C E2544_00760 PF00528 Binding-protein-dependent transport system inner membrane component E2544_00765 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E2544_00770 PF01926 50S ribosome-binding GTPase E2544_00770 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal E2544_00780 PF06445 GyrI-like small molecule binding domain E2544_00780 PF12833 Helix-turn-helix domain E2544_00790 PF00266 Aminotransferase class-V E2544_00800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_00800 PF03466 LysR substrate binding domain E2544_00810 PF01614 Bacterial transcriptional regulator E2544_00810 PF09339 IclR helix-turn-helix domain E2544_00815 PF01425 Amidase E2544_00820 PF03401 Tripartite tricarboxylate transporter family receptor E2544_00830 PF04386 Stringent starvation protein B E2544_00835 PF00043 Glutathione S-transferase, C-terminal domain E2544_00835 PF02798 Glutathione S-transferase, N-terminal domain E2544_00840 PF02167 Cytochrome C1 family E2544_00845 PF00032 Cytochrome b(C-terminal)/b6/petD E2544_00845 PF00033 Cytochrome b/b6/petB E2544_00850 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal E2544_00850 PF00355 Rieske [2Fe-2S] domain E2544_00855 PF01741 Large-conductance mechanosensitive channel, MscL E2544_00860 PF00596 Class II Aldolase and Adducin N-terminal domain E2544_00870 PF07690 Major Facilitator Superfamily E2544_00870 PF00083 Sugar (and other) transporter E2544_00880 PF01784 NIF3 (NGG1p interacting factor 3) E2544_00885 PF13180 PDZ domain E2544_00895 PF00902 Sec-independent protein translocase protein (TatC) E2544_00900 PF02416 mttA/Hcf106 family E2544_00905 PF02416 mttA/Hcf106 family E2544_00910 PF01230 HIT domain E2544_00915 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase E2544_00920 PF01502 Phosphoribosyl-AMP cyclohydrolase E2544_00925 PF00977 Histidine biosynthesis protein E2544_00930 PF00977 Histidine biosynthesis protein E2544_00935 PF00117 Glutamine amidotransferase class-I E2544_00940 PF00475 Imidazoleglycerol-phosphate dehydratase E2544_00945 PF00155 Aminotransferase class I and II E2544_00950 PF00815 Histidinol dehydrogenase E2544_00955 PF01634 ATP phosphoribosyltransferase E2544_00960 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) E2544_00970 PF01061 ABC-2 type transporter E2544_00975 PF00005 ABC transporter E2544_00985 PF04333 MlaA lipoprotein E2544_00990 PF02470 MlaD protein E2544_00995 PF02405 Permease MlaE E2544_01000 PF00005 ABC transporter E2544_01005 PF03060 Nitronate monooxygenase E2544_01010 PF03401 Tripartite tricarboxylate transporter family receptor E2544_01015 PF06779 Uncharacterised MFS-type transporter YbfB E2544_01020 PF03466 LysR substrate binding domain E2544_01020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_01025 PF03922 OmpW family E2544_01030 PF07992 Pyridine nucleotide-disulphide oxidoreductase E2544_01030 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster E2544_01035 PF04898 Glutamate synthase central domain E2544_01035 PF01493 GXGXG motif E2544_01035 PF01645 Conserved region in glutamate synthase E2544_01035 PF00310 Glutamine amidotransferases class-II E2544_01045 PF00756 Putative esterase E2544_01055 PF04545 Sigma-70, region 4 E2544_01055 PF04542 Sigma-70 region 2 E2544_01055 PF00140 Sigma-70 factor, region 1.2 E2544_01060 PF00149 Calcineurin-like phosphoesterase E2544_01075 PF02790 Cytochrome C oxidase subunit II, transmembrane domain E2544_01075 PF00116 Cytochrome C oxidase subunit II, periplasmic domain E2544_01080 PF00115 Cytochrome C and Quinol oxidase polypeptide I E2544_01090 PF00510 Cytochrome c oxidase subunit III E2544_01110 PF02628 Cytochrome oxidase assembly protein E2544_01115 PF01040 UbiA prenyltransferase family E2544_01120 PF02630 SCO1/SenC E2544_01140 PF00132 Bacterial transferase hexapeptide (six repeats) E2544_01140 PF14602 Hexapeptide repeat of succinyl-transferase E2544_01140 PF12804 MobA-like NTP transferase domain E2544_01145 PF07690 Major Facilitator Superfamily E2544_01150 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain E2544_01150 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain E2544_01150 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain E2544_01160 PF01037 Lrp/AsnC ligand binding domain E2544_01165 PF01380 SIS domain E2544_01170 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain E2544_01170 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain E2544_01170 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain E2544_01180 PF00534 Glycosyl transferases group 1 E2544_01185 PF02563 Polysaccharide biosynthesis/export protein E2544_01210 PF00544 Pectate lyase E2544_01220 PF13657 HipA N-terminal domain E2544_01220 PF07804 HipA-like C-terminal domain E2544_01230 PF07690 Major Facilitator Superfamily E2544_01245 PF05853 beta-keto acid cleavage enzyme E2544_01255 PF03741 Integral membrane protein TerC family E2544_01270 PF03783 Curli production assembly/transport component CsgG E2544_01280 PF05643 Putative bacterial lipoprotein (DUF799) E2544_01295 PF13185 GAF domain E2544_01305 PF00248 Aldo/keto reductase family E2544_01315 PF02423 Ornithine cyclodeaminase/mu-crystallin family E2544_01320 PF00795 Carbon-nitrogen hydrolase E2544_01325 PF01037 Lrp/AsnC ligand binding domain E2544_01330 PF02423 Ornithine cyclodeaminase/mu-crystallin family E2544_01340 PF01926 50S ribosome-binding GTPase E2544_01345 PF02548 Ketopantoate hydroxymethyltransferase E2544_01355 PF17102 Stealth protein CR3, conserved region 3 E2544_01355 PF11380 Stealth protein CR2, conserved region 2 E2544_01355 PF17101 Stealth protein CR1, conserved region 1 E2544_01355 PF00534 Glycosyl transferases group 1 E2544_01355 PF17103 Stealth protein CR4, conserved region 4 E2544_01360 PF00149 Calcineurin-like phosphoesterase E2544_01360 PF02872 5'-nucleotidase, C-terminal domain E2544_01365 PF08240 Alcohol dehydrogenase GroES-like domain E2544_01365 PF00107 Zinc-binding dehydrogenase E2544_01370 PF02583 Metal-sensitive transcriptional repressor E2544_01375 PF07702 UTRA domain E2544_01375 PF00392 Bacterial regulatory proteins, gntR family E2544_01380 PF05962 HutD E2544_01385 PF01175 Urocanase Rossmann-like domain E2544_01385 PF17392 Urocanase C-terminal domain E2544_01385 PF17391 Urocanase N-terminal domain E2544_01390 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin E2544_01395 PF00221 Aromatic amino acid lyase E2544_01400 PF01979 Amidohydrolase family E2544_01405 PF07690 Major Facilitator Superfamily E2544_01410 PF03401 Tripartite tricarboxylate transporter family receptor E2544_01415 PF03466 LysR substrate binding domain E2544_01415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_01420 PF03401 Tripartite tricarboxylate transporter family receptor E2544_01425 PF07687 Peptidase dimerisation domain E2544_01425 PF01546 Peptidase family M20/M25/M40 E2544_01430 PF00156 Phosphoribosyl transferase domain E2544_01480 PF07729 FCD domain E2544_01480 PF00392 Bacterial regulatory proteins, gntR family E2544_01495 PF00171 Aldehyde dehydrogenase family E2544_01505 PF00111 2Fe-2S iron-sulfur cluster binding domain E2544_01505 PF00970 Oxidoreductase FAD-binding domain E2544_01505 PF00175 Oxidoreductase NAD-binding domain E2544_01510 PF00582 Universal stress protein family E2544_01515 PF03358 NADPH-dependent FMN reductase E2544_01520 PF00528 Binding-protein-dependent transport system inner membrane component E2544_01530 PF03459 TOBE domain E2544_01535 PF11737 Protein of unknown function (DUF3300) E2544_01560 PF03061 Thioesterase superfamily E2544_01570 PF04879 Molybdopterin oxidoreductase Fe4S4 domain E2544_01570 PF01568 Molydopterin dinucleotide binding domain E2544_01570 PF00384 Molybdopterin oxidoreductase E2544_01575 PF01568 Molydopterin dinucleotide binding domain E2544_01575 PF00384 Molybdopterin oxidoreductase E2544_01575 PF04879 Molybdopterin oxidoreductase Fe4S4 domain E2544_01580 PF12800 4Fe-4S binding domain E2544_01580 PF13247 4Fe-4S dicluster domain E2544_01580 PF09163 Formate dehydrogenase N, transmembrane E2544_01585 PF01292 Prokaryotic cytochrome b561 E2544_01590 PF04216 Protein involved in formate dehydrogenase formation E2544_01595 PF03841 L-seryl-tRNA selenium transferase E2544_01595 PF12390 Selenocysteine synthase N terminal E2544_01600 PF09106 Elongation factor SelB, winged helix E2544_01600 PF00009 Elongation factor Tu GTP binding domain E2544_01600 PF03144 Elongation factor Tu domain 2 E2544_01600 PF09107 Elongation factor SelB, winged helix E2544_01615 PF01841 Transglutaminase-like superfamily E2544_01620 PF00586 AIR synthase related protein, N-terminal domain E2544_01620 PF02769 AIR synthase related protein, C-terminal domain E2544_01625 PF03466 LysR substrate binding domain E2544_01625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_01635 PF01323 DSBA-like thioredoxin domain E2544_01645 PF00171 Aldehyde dehydrogenase family E2544_01650 PF01590 GAF domain E2544_01650 PF00158 Sigma-54 interaction domain E2544_01650 PF02954 Bacterial regulatory protein, Fis family E2544_01655 PF00218 Indole-3-glycerol phosphate synthase E2544_01660 PF00591 Glycosyl transferase family, a/b domain E2544_01660 PF02885 Glycosyl transferase family, helical bundle domain E2544_01665 PF00117 Glutamine amidotransferase class-I E2544_01670 PF00425 chorismate binding enzyme E2544_01670 PF04715 Anthranilate synthase component I, N terminal region E2544_01675 PF13419 Haloacid dehalogenase-like hydrolase E2544_01685 PF04379 ApaG domain E2544_01690 PF03562 MltA specific insert domain E2544_01690 PF06725 3D domain E2544_01695 PF01494 FAD binding domain E2544_01700 PF10411 Disulfide bond isomerase protein N-terminus E2544_01700 PF13098 Thioredoxin-like domain E2544_01705 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E2544_01705 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E2544_01705 PF01842 ACT domain E2544_01710 PF01171 PP-loop family E2544_01720 PF07992 Pyridine nucleotide-disulphide oxidoreductase E2544_01725 PF03401 Tripartite tricarboxylate transporter family receptor E2544_01730 PF01144 Coenzyme A transferase E2544_01735 PF01144 Coenzyme A transferase E2544_01740 PF03401 Tripartite tricarboxylate transporter family receptor E2544_01745 PF12146 Serine aminopeptidase, S33 E2544_01750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_01750 PF03466 LysR substrate binding domain E2544_01755 PF13458 Periplasmic binding protein E2544_01760 PF02653 Branched-chain amino acid transport system / permease component E2544_01765 PF02653 Branched-chain amino acid transport system / permease component E2544_01770 PF00005 ABC transporter E2544_01770 PF12399 Branched-chain amino acid ATP-binding cassette transporter E2544_01775 PF00005 ABC transporter E2544_01780 PF00795 Carbon-nitrogen hydrolase E2544_01785 PF08406 CbbQ/NirQ/NorQ C-terminal E2544_01785 PF07728 AAA domain (dynein-related subfamily) E2544_01790 PF00092 von Willebrand factor type A domain E2544_01805 PF17645 Arylmalonate decarboxylase E2544_01810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_01810 PF03466 LysR substrate binding domain E2544_01820 PF00378 Enoyl-CoA hydratase/isomerase E2544_01835 PF00119 ATP synthase A chain E2544_01840 PF00137 ATP synthase subunit C E2544_01845 PF00430 ATP synthase B/B' CF(0) E2544_01850 PF00213 ATP synthase delta (OSCP) subunit E2544_01855 PF02874 ATP synthase alpha/beta family, beta-barrel domain E2544_01855 PF00306 ATP synthase alpha/beta chain, C terminal domain E2544_01855 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E2544_01860 PF00231 ATP synthase E2544_01865 PF02874 ATP synthase alpha/beta family, beta-barrel domain E2544_01865 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E2544_01870 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain E2544_01880 PF01208 Uroporphyrinogen decarboxylase (URO-D) E2544_01885 PF00271 Helicase conserved C-terminal domain E2544_01885 PF17764 3′ DNA-binding domain (3′BD) E2544_01885 PF18074 Primosomal protein N C-terminal domain E2544_01885 PF18319 PriA DNA helicase Cys-rich region (CRR) domain E2544_01885 PF00270 DEAD/DEAH box helicase E2544_01890 PF00580 UvrD/REP helicase N-terminal domain E2544_01890 PF13361 UvrD-like helicase C-terminal domain E2544_01895 PF01380 SIS domain E2544_01905 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle E2544_01905 PF14602 Hexapeptide repeat of succinyl-transferase E2544_01920 PF01546 Peptidase family M20/M25/M40 E2544_01920 PF07687 Peptidase dimerisation domain E2544_01930 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E2544_01930 PF00005 ABC transporter E2544_01935 PF00005 ABC transporter E2544_01935 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E2544_01940 PF00528 Binding-protein-dependent transport system inner membrane component E2544_01940 PF12911 N-terminal TM domain of oligopeptide transport permease C E2544_01945 PF00528 Binding-protein-dependent transport system inner membrane component E2544_01950 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E2544_01955 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family E2544_01960 PF03466 LysR substrate binding domain E2544_01960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_01965 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E2544_01975 PF01256 Carbohydrate kinase E2544_01980 PF00378 Enoyl-CoA hydratase/isomerase E2544_01985 PF00378 Enoyl-CoA hydratase/isomerase E2544_01990 PF03060 Nitronate monooxygenase E2544_01995 PF00440 Bacterial regulatory proteins, tetR family E2544_02005 PF02515 CoA-transferase family III E2544_02010 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain E2544_02010 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain E2544_02010 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain E2544_02020 PF01979 Amidohydrolase family E2544_02025 PF07683 Cobalamin synthesis protein cobW C-terminal domain E2544_02025 PF02492 CobW/HypB/UreG, nucleotide-binding domain E2544_02055 PF03401 Tripartite tricarboxylate transporter family receptor E2544_02060 PF13442 Cytochrome C oxidase, cbb3-type, subunit III E2544_02070 PF00512 His Kinase A (phospho-acceptor) domain E2544_02070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2544_02070 PF09456 RcsC Alpha-Beta-Loop (ABL) E2544_02070 PF00072 Response regulator receiver domain E2544_02075 PF00196 Bacterial regulatory proteins, luxR family E2544_02075 PF00072 Response regulator receiver domain E2544_02095 PF02735 Ku70/Ku80 beta-barrel domain E2544_02100 PF04679 ATP dependent DNA ligase C terminal region E2544_02100 PF01068 ATP dependent DNA ligase domain E2544_02100 PF13298 DNA polymerase Ligase (LigD) E2544_02110 PF05368 NmrA-like family E2544_02115 PF02566 OsmC-like protein E2544_02120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_02120 PF03466 LysR substrate binding domain E2544_02130 PF08281 Sigma-70, region 4 E2544_02130 PF04542 Sigma-70 region 2 E2544_02130 PF12680 SnoaL-like domain E2544_02135 PF00561 alpha/beta hydrolase fold E2544_02140 PF16123 Hydroxyacylglutathione hydrolase C-terminus E2544_02140 PF00753 Metallo-beta-lactamase superfamily E2544_02145 PF13823 Alcohol dehydrogenase GroES-associated E2544_02145 PF00107 Zinc-binding dehydrogenase E2544_02145 PF08240 Alcohol dehydrogenase GroES-like domain E2544_02150 PF02540 NAD synthase E2544_02155 PF00034 Cytochrome c E2544_02160 PF00732 GMC oxidoreductase E2544_02160 PF05199 GMC oxidoreductase E2544_02165 PF13618 Gluconate 2-dehydrogenase subunit 3 E2544_02185 PF07883 Cupin domain E2544_02190 PF01557 Fumarylacetoacetate (FAA) hydrolase family E2544_02200 PF02653 Branched-chain amino acid transport system / permease component E2544_02205 PF02653 Branched-chain amino acid transport system / permease component E2544_02205 PF11862 Domain of unknown function (DUF3382) E2544_02210 PF00005 ABC transporter E2544_02210 PF12399 Branched-chain amino acid ATP-binding cassette transporter E2544_02215 PF00005 ABC transporter E2544_02220 PF00392 Bacterial regulatory proteins, gntR family E2544_02220 PF07729 FCD domain E2544_02230 PF03466 LysR substrate binding domain E2544_02230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_02235 PF03401 Tripartite tricarboxylate transporter family receptor E2544_02250 PF04262 Glutamate-cysteine ligase E2544_02255 PF00561 alpha/beta hydrolase fold E2544_02265 PF00196 Bacterial regulatory proteins, luxR family E2544_02265 PF03472 Autoinducer binding domain E2544_02275 PF02615 Malate/L-lactate dehydrogenase E2544_02280 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E2544_02280 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E2544_02285 PF03401 Tripartite tricarboxylate transporter family receptor E2544_02290 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus E2544_02295 PF08666 SAF domain E2544_02300 PF00392 Bacterial regulatory proteins, gntR family E2544_02300 PF07702 UTRA domain E2544_02305 PF00561 alpha/beta hydrolase fold E2544_02310 PF07021 Methionine biosynthesis protein MetW E2544_02310 PF00561 alpha/beta hydrolase fold E2544_02315 PF07690 Major Facilitator Superfamily E2544_02325 PF03458 UPF0126 domain E2544_02330 PF00392 Bacterial regulatory proteins, gntR family E2544_02330 PF07729 FCD domain E2544_02335 PF03746 LamB/YcsF family E2544_02340 PF02626 Carboxyltransferase domain, subdomain A and B E2544_02345 PF02682 Carboxyltransferase domain, subdomain C and D E2544_02355 PF03466 LysR substrate binding domain E2544_02355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_02360 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E2544_02360 PF01842 ACT domain E2544_02360 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E2544_02370 PF00512 His Kinase A (phospho-acceptor) domain E2544_02370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2544_02370 PF00672 HAMP domain E2544_02375 PF00486 Transcriptional regulatory protein, C terminal E2544_02375 PF00072 Response regulator receiver domain E2544_02380 PF11808 Phosphate regulon sensor protein PhoR E2544_02380 PF00512 His Kinase A (phospho-acceptor) domain E2544_02380 PF00989 PAS fold E2544_02380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2544_02385 PF00072 Response regulator receiver domain E2544_02385 PF00486 Transcriptional regulatory protein, C terminal E2544_02390 PF01209 ubiE/COQ5 methyltransferase family E2544_02405 PF03109 ABC1 family E2544_02415 PF01467 Cytidylyltransferase-like E2544_02420 PF02321 Outer membrane efflux protein E2544_02430 PF08543 Phosphomethylpyrimidine kinase E2544_02435 PF05690 Thiazole biosynthesis protein ThiG E2544_02440 PF01497 Periplasmic binding protein E2544_02445 PF07715 TonB-dependent Receptor Plug Domain E2544_02445 PF00593 TonB dependent receptor E2544_02450 PF02310 B12 binding domain E2544_02450 PF02607 B12 binding domain E2544_02450 PF02965 Vitamin B12 dependent methionine synthase, activation domain E2544_02450 PF00809 Pterin binding enzyme E2544_02450 PF02574 Homocysteine S-methyltransferase E2544_02465 PF00501 AMP-binding enzyme E2544_02465 PF13193 AMP-binding enzyme C-terminal domain E2544_02470 PF03401 Tripartite tricarboxylate transporter family receptor E2544_02485 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain E2544_02485 PF01077 Nitrite and sulphite reductase 4Fe-4S domain E2544_02495 PF03466 LysR substrate binding domain E2544_02495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_02510 PF00043 Glutathione S-transferase, C-terminal domain E2544_02510 PF13417 Glutathione S-transferase, N-terminal domain E2544_02530 PF00005 ABC transporter E2544_02535 PF00005 ABC transporter E2544_02535 PF12399 Branched-chain amino acid ATP-binding cassette transporter E2544_02540 PF02653 Branched-chain amino acid transport system / permease component E2544_02540 PF11862 Domain of unknown function (DUF3382) E2544_02545 PF02653 Branched-chain amino acid transport system / permease component E2544_02560 PF07729 FCD domain E2544_02560 PF00392 Bacterial regulatory proteins, gntR family E2544_02565 PF00484 Carbonic anhydrase E2544_02580 PF01425 Amidase E2544_02585 PF08241 Methyltransferase domain E2544_02595 PF07729 FCD domain E2544_02595 PF00392 Bacterial regulatory proteins, gntR family E2544_02600 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E2544_02600 PF00205 Thiamine pyrophosphate enzyme, central domain E2544_02600 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain E2544_02615 PF00633 Helix-hairpin-helix motif E2544_02615 PF14815 NUDIX domain E2544_02615 PF10576 Iron-sulfur binding domain of endonuclease III E2544_02615 PF00730 HhH-GPD superfamily base excision DNA repair protein E2544_02625 PF03466 LysR substrate binding domain E2544_02625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_02630 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E2544_02630 PF07992 Pyridine nucleotide-disulphide oxidoreductase E2544_02635 PF02817 e3 binding domain E2544_02635 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) E2544_02635 PF00364 Biotin-requiring enzyme E2544_02645 PF00676 Dehydrogenase E1 component E2544_02655 PF00005 ABC transporter E2544_02660 PF00005 ABC transporter E2544_02660 PF12399 Branched-chain amino acid ATP-binding cassette transporter E2544_02670 PF02653 Branched-chain amino acid transport system / permease component E2544_02675 PF13458 Periplasmic binding protein E2544_02680 PF01488 Shikimate / quinate 5-dehydrogenase E2544_02680 PF18317 Shikimate 5'-dehydrogenase C-terminal domain E2544_02680 PF08501 Shikimate dehydrogenase substrate binding domain E2544_02690 PF00392 Bacterial regulatory proteins, gntR family E2544_02690 PF07729 FCD domain E2544_02700 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) E2544_02710 PF03975 CheD chemotactic sensory transduction E2544_02715 PF18075 FtsX extracellular domain E2544_02720 PF00005 ABC transporter E2544_02725 PF00497 Bacterial extracellular solute-binding proteins, family 3 E2544_02730 PF00528 Binding-protein-dependent transport system inner membrane component E2544_02735 PF00528 Binding-protein-dependent transport system inner membrane component E2544_02740 PF00005 ABC transporter E2544_02745 PF03401 Tripartite tricarboxylate transporter family receptor E2544_02755 PF00005 ABC transporter E2544_02760 PF00005 ABC transporter E2544_02765 PF11862 Domain of unknown function (DUF3382) E2544_02765 PF02653 Branched-chain amino acid transport system / permease component E2544_02770 PF02653 Branched-chain amino acid transport system / permease component E2544_02780 PF01494 FAD binding domain E2544_02790 PF03401 Tripartite tricarboxylate transporter family receptor E2544_02795 PF00800 Prephenate dehydratase E2544_02795 PF01817 Chorismate mutase type II E2544_02795 PF01842 ACT domain E2544_02800 PF02798 Glutathione S-transferase, N-terminal domain E2544_02800 PF14497 Glutathione S-transferase, C-terminal domain E2544_02805 PF01557 Fumarylacetoacetate (FAA) hydrolase family E2544_02810 PF07883 Cupin domain E2544_02815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_02815 PF03466 LysR substrate binding domain E2544_02825 PF02321 Outer membrane efflux protein E2544_02830 PF00873 AcrB/AcrD/AcrF family E2544_02835 PF13533 Biotin-lipoyl like E2544_02840 PF03466 LysR substrate binding domain E2544_02840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_02845 PF01594 AI-2E family transporter E2544_02855 PF07690 Major Facilitator Superfamily E2544_02870 PF03551 Transcriptional regulator PadR-like family E2544_02875 PF08021 Siderophore-interacting FAD-binding domain E2544_02875 PF04954 Siderophore-interacting protein E2544_02880 PF03466 LysR substrate binding domain E2544_02880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_02925 PF03466 LysR substrate binding domain E2544_02925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_02940 PF05853 beta-keto acid cleavage enzyme E2544_02945 PF00370 FGGY family of carbohydrate kinases, N-terminal domain E2544_02945 PF02782 FGGY family of carbohydrate kinases, C-terminal domain E2544_02950 PF02653 Branched-chain amino acid transport system / permease component E2544_02960 PF00005 ABC transporter E2544_02965 PF01494 FAD binding domain E2544_02970 PF03401 Tripartite tricarboxylate transporter family receptor E2544_02975 PF03466 LysR substrate binding domain E2544_02975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_02980 PF05698 Bacterial trigger factor protein (TF) C-terminus E2544_02985 PF07171 MlrC C-terminus E2544_02985 PF07364 Metallopeptidase family M81 E2544_02990 PF03401 Tripartite tricarboxylate transporter family receptor E2544_02995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_02995 PF03466 LysR substrate binding domain E2544_03000 PF00497 Bacterial extracellular solute-binding proteins, family 3 E2544_03005 PF00034 Cytochrome c E2544_03005 PF13442 Cytochrome C oxidase, cbb3-type, subunit III E2544_03005 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase E2544_03010 PF00857 Isochorismatase family E2544_03020 PF00561 alpha/beta hydrolase fold E2544_03025 PF01494 FAD binding domain E2544_03030 PF00111 2Fe-2S iron-sulfur cluster binding domain E2544_03030 PF01799 [2Fe-2S] binding domain E2544_03035 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase E2544_03035 PF00034 Cytochrome c E2544_03035 PF13442 Cytochrome C oxidase, cbb3-type, subunit III E2544_03040 PF07690 Major Facilitator Superfamily E2544_03045 PF12802 MarR family E2544_03055 PF00892 EamA-like transporter family E2544_03075 PF00106 short chain dehydrogenase E2544_03080 PF03466 LysR substrate binding domain E2544_03080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_03100 PF18495 Antitoxin VbhA E2544_03130 PF00145 C-5 cytosine-specific DNA methylase E2544_03150 PF00589 Phage integrase family E2544_03160 PF00860 Permease family E2544_03170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2544_03170 PF00183 Hsp90 protein E2544_03175 PF13380 CoA binding domain E2544_03175 PF00583 Acetyltransferase (GNAT) family E2544_03175 PF13607 Succinyl-CoA ligase like flavodoxin domain E2544_03180 PF00107 Zinc-binding dehydrogenase E2544_03180 PF08240 Alcohol dehydrogenase GroES-like domain E2544_03185 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E2544_03185 PF02770 Acyl-CoA dehydrogenase, middle domain E2544_03185 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E2544_03190 PF03401 Tripartite tricarboxylate transporter family receptor E2544_03200 PF09339 IclR helix-turn-helix domain E2544_03210 PF07690 Major Facilitator Superfamily E2544_03215 PF07690 Major Facilitator Superfamily E2544_03220 PF01546 Peptidase family M20/M25/M40 E2544_03220 PF07687 Peptidase dimerisation domain E2544_03225 PF07690 Major Facilitator Superfamily E2544_03230 PF13378 Enolase C-terminal domain-like E2544_03230 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain E2544_03235 PF01081 KDPG and KHG aldolase E2544_03240 PF05035 2-keto-3-deoxy-galactonokinase E2544_03245 PF01614 Bacterial transcriptional regulator E2544_03245 PF09339 IclR helix-turn-helix domain E2544_03250 PF00043 Glutathione S-transferase, C-terminal domain E2544_03250 PF13417 Glutathione S-transferase, N-terminal domain E2544_03255 PF01510 N-acetylmuramoyl-L-alanine amidase E2544_03270 PF02881 SRP54-type protein, helical bundle domain E2544_03270 PF00448 SRP54-type protein, GTPase domain E2544_03270 PF02978 Signal peptide binding domain E2544_03280 PF04972 BON domain E2544_03280 PF01476 LysM domain E2544_03290 PF02597 ThiS family E2544_03290 PF05690 Thiazole biosynthesis protein ThiG E2544_03295 PF00561 alpha/beta hydrolase fold E2544_03300 PF02390 Putative methyltransferase E2544_03310 PF03631 Virulence factor BrkB E2544_03320 PF00067 Cytochrome P450 E2544_03345 PF00166 Chaperonin 10 Kd subunit E2544_03350 PF00118 TCP-1/cpn60 chaperonin family E2544_03355 PF12833 Helix-turn-helix domain E2544_03355 PF06719 AraC-type transcriptional regulator N-terminus E2544_03385 PF00593 TonB dependent receptor E2544_03385 PF07715 TonB-dependent Receptor Plug Domain E2544_03395 PF03060 Nitronate monooxygenase E2544_03400 PF01965 DJ-1/PfpI family E2544_03405 PF00581 Rhodanese-like domain E2544_03420 PF00392 Bacterial regulatory proteins, gntR family E2544_03420 PF00155 Aminotransferase class I and II E2544_03425 PF02627 Carboxymuconolactone decarboxylase family E2544_03430 PF00589 Phage integrase family E2544_03430 PF02899 Phage integrase, N-terminal SAM-like domain E2544_03450 PF01965 DJ-1/PfpI family E2544_03455 PF00106 short chain dehydrogenase E2544_03490 PF03401 Tripartite tricarboxylate transporter family receptor E2544_03495 PF04303 PrpF protein E2544_03500 PF03466 LysR substrate binding domain E2544_03500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_03510 PF01272 Transcription elongation factor, GreA/GreB, C-term E2544_03510 PF03449 Transcription elongation factor, N-terminal E2544_03520 PF02753 Pili assembly chaperone PapD, C-terminal domain E2544_03520 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain E2544_03525 PF00155 Aminotransferase class I and II E2544_03530 PF01557 Fumarylacetoacetate (FAA) hydrolase family E2544_03540 PF02538 Hydantoinase B/oxoprolinase E2544_03545 PF05378 Hydantoinase/oxoprolinase N-terminal region E2544_03545 PF01968 Hydantoinase/oxoprolinase E2544_03550 PF00202 Aminotransferase class-III E2544_03555 PF00005 ABC transporter E2544_03560 PF12399 Branched-chain amino acid ATP-binding cassette transporter E2544_03560 PF00005 ABC transporter E2544_03565 PF02653 Branched-chain amino acid transport system / permease component E2544_03565 PF11862 Domain of unknown function (DUF3382) E2544_03570 PF02653 Branched-chain amino acid transport system / permease component E2544_03590 PF00072 Response regulator receiver domain E2544_03590 PF00990 Diguanylate cyclase, GGDEF domain E2544_03595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_03595 PF03466 LysR substrate binding domain E2544_03600 PF03401 Tripartite tricarboxylate transporter family receptor E2544_03610 PF00072 Response regulator receiver domain E2544_03610 PF04397 LytTr DNA-binding domain E2544_03615 PF07694 5TMR of 5TMR-LYT E2544_03615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2544_03615 PF06580 Histidine kinase E2544_03620 PF01037 Lrp/AsnC ligand binding domain E2544_03625 PF17645 Arylmalonate decarboxylase E2544_03630 PF00005 ABC transporter E2544_03635 PF09084 NMT1/THI5 like E2544_03640 PF00528 Binding-protein-dependent transport system inner membrane component E2544_03645 PF00557 Metallopeptidase family M24 E2544_03645 PF01321 Creatinase/Prolidase N-terminal domain E2544_03650 PF03466 LysR substrate binding domain E2544_03650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_03660 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain E2544_03660 PF01276 Orn/Lys/Arg decarboxylase, major domain E2544_03660 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain E2544_03665 PF00155 Aminotransferase class I and II E2544_03665 PF00392 Bacterial regulatory proteins, gntR family E2544_03680 PF01168 Alanine racemase, N-terminal domain E2544_03690 PF00117 Glutamine amidotransferase class-I E2544_03690 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain E2544_03700 PF07690 Major Facilitator Superfamily E2544_03700 PF00083 Sugar (and other) transporter E2544_03710 PF00392 Bacterial regulatory proteins, gntR family E2544_03710 PF07729 FCD domain E2544_03715 PF03401 Tripartite tricarboxylate transporter family receptor E2544_03725 PF00701 Dihydrodipicolinate synthetase family E2544_03730 PF03401 Tripartite tricarboxylate transporter family receptor E2544_03735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_03735 PF03466 LysR substrate binding domain E2544_03740 PF00266 Aminotransferase class-V E2544_03745 PF00392 Bacterial regulatory proteins, gntR family E2544_03745 PF00155 Aminotransferase class I and II E2544_03750 PF00464 Serine hydroxymethyltransferase E2544_03755 PF03594 Benzoate membrane transport protein E2544_03765 PF00890 FAD binding domain E2544_03765 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) E2544_03770 PF03401 Tripartite tricarboxylate transporter family receptor E2544_03775 PF08546 Ketopantoate reductase PanE/ApbA C terminal E2544_03775 PF02558 Ketopantoate reductase PanE/ApbA E2544_03780 PF00596 Class II Aldolase and Adducin N-terminal domain E2544_03785 PF00501 AMP-binding enzyme E2544_03785 PF13193 AMP-binding enzyme C-terminal domain E2544_03795 PF00206 Lyase E2544_03795 PF14698 Argininosuccinate lyase C-terminal E2544_03800 PF00403 Heavy-metal-associated domain E2544_03805 PF05275 Copper resistance protein B precursor (CopB) E2544_03810 PF07731 Multicopper oxidase E2544_03810 PF07732 Multicopper oxidase E2544_03810 PF00394 Multicopper oxidase E2544_03820 PF00672 HAMP domain E2544_03820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2544_03820 PF00512 His Kinase A (phospho-acceptor) domain E2544_03825 PF00072 Response regulator receiver domain E2544_03825 PF00486 Transcriptional regulatory protein, C terminal E2544_03845 PF01979 Amidohydrolase family E2544_03850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_03850 PF03466 LysR substrate binding domain E2544_03860 PF04303 PrpF protein E2544_03865 PF00694 Aconitase C-terminal domain E2544_03865 PF00330 Aconitase family (aconitate hydratase) E2544_03875 PF13332 Hemagglutinin repeat E2544_03875 PF13018 Extended Signal Peptide of Type V secretion system E2544_03875 PF04829 Pre-toxin domain with VENN motif E2544_03875 PF05860 haemagglutination activity domain E2544_03885 PF01527 Transposase E2544_03900 PF02954 Bacterial regulatory protein, Fis family E2544_03900 PF00158 Sigma-54 interaction domain E2544_03900 PF01590 GAF domain E2544_03905 PF03401 Tripartite tricarboxylate transporter family receptor E2544_03910 PF12697 Alpha/beta hydrolase family E2544_03920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_03920 PF03466 LysR substrate binding domain E2544_03925 PF03466 LysR substrate binding domain E2544_03925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_03935 PF00563 EAL domain E2544_03935 PF00990 Diguanylate cyclase, GGDEF domain E2544_03935 PF03707 Bacterial signalling protein N terminal repeat E2544_03945 PF01048 Phosphorylase superfamily E2544_03970 PF04972 BON domain E2544_03970 PF00691 OmpA family E2544_04095 PF00004 ATPase family associated with various cellular activities (AAA) E2544_04095 PF17871 AAA lid domain E2544_04095 PF07724 AAA domain (Cdc48 subfamily) E2544_04095 PF10431 C-terminal, D2-small domain, of ClpB protein E2544_04100 PF04717 Type VI secretion system, phage-baseplate injector E2544_04130 PF00043 Glutathione S-transferase, C-terminal domain E2544_04130 PF02798 Glutathione S-transferase, N-terminal domain E2544_04135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_04135 PF03466 LysR substrate binding domain E2544_04140 PF04205 FMN-binding domain E2544_04140 PF00890 FAD binding domain E2544_04150 PF03401 Tripartite tricarboxylate transporter family receptor E2544_04155 PF00155 Aminotransferase class I and II E2544_04155 PF00392 Bacterial regulatory proteins, gntR family E2544_04165 PF02322 Cytochrome bd terminal oxidase subunit II E2544_04170 PF01654 Cytochrome bd terminal oxidase subunit I E2544_04175 PF00892 EamA-like transporter family E2544_04180 PF03466 LysR substrate binding domain E2544_04180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_04200 PF00005 ABC transporter E2544_04205 PF13533 Biotin-lipoyl like E2544_04210 PF02321 Outer membrane efflux protein E2544_04215 PF00440 Bacterial regulatory proteins, tetR family E2544_04220 PF12792 CSS motif domain associated with EAL E2544_04220 PF00563 EAL domain E2544_04225 PF07885 Ion channel E2544_04225 PF02254 TrkA-N domain E2544_04230 PF00486 Transcriptional regulatory protein, C terminal E2544_04230 PF00072 Response regulator receiver domain E2544_04240 PF01757 Acyltransferase family E2544_04260 PF09334 tRNA synthetases class I (M) E2544_04260 PF01588 Putative tRNA binding domain E2544_04270 PF10609 NUBPL iron-transfer P-loop NTPase E2544_04285 PF00692 dUTPase E2544_04295 PF17156 Gammaproteobacterial periplasmic sensor domain E2544_04295 PF00990 Diguanylate cyclase, GGDEF domain E2544_04310 PF01276 Orn/Lys/Arg decarboxylase, major domain E2544_04310 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain E2544_04310 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain E2544_04320 PF02777 Iron/manganese superoxide dismutases, C-terminal domain E2544_04320 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain E2544_04325 PF02535 ZIP Zinc transporter E2544_04330 PF08669 Glycine cleavage T-protein C-terminal barrel domain E2544_04330 PF01571 Aminomethyltransferase folate-binding domain E2544_04335 PF01597 Glycine cleavage H-protein E2544_04340 PF02347 Glycine cleavage system P-protein E2544_04355 PF01425 Amidase E2544_04360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E2544_04360 PF00005 ABC transporter E2544_04365 PF00528 Binding-protein-dependent transport system inner membrane component E2544_04370 PF00528 Binding-protein-dependent transport system inner membrane component E2544_04385 PF00171 Aldehyde dehydrogenase family E2544_04390 PF00202 Aminotransferase class-III E2544_04395 PF00155 Aminotransferase class I and II E2544_04400 PF00186 Dihydrofolate reductase E2544_04405 PF00990 Diguanylate cyclase, GGDEF domain E2544_04405 PF03707 Bacterial signalling protein N terminal repeat E2544_04405 PF00563 EAL domain E2544_04410 PF00303 Thymidylate synthase E2544_04420 PF03232 Ubiquinone biosynthesis protein COQ7 E2544_04425 PF00953 Glycosyl transferase family 4 E2544_04430 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain E2544_04430 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain E2544_04430 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain E2544_04435 PF01370 NAD dependent epimerase/dehydratase family E2544_04440 PF03023 Lipid II flippase MurJ E2544_04445 PF13439 Glycosyltransferase Family 4 E2544_04445 PF00534 Glycosyl transferases group 1 E2544_04450 PF00733 Asparagine synthase E2544_04450 PF13537 Glutamine amidotransferase domain E2544_04455 PF13439 Glycosyltransferase Family 4 E2544_04455 PF00534 Glycosyl transferases group 1 E2544_04460 PF00534 Glycosyl transferases group 1 E2544_04460 PF13439 Glycosyltransferase Family 4 E2544_04465 PF13477 Glycosyl transferase 4-like E2544_04465 PF00534 Glycosyl transferases group 1 E2544_04470 PF00342 Phosphoglucose isomerase E2544_04475 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I E2544_04475 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II E2544_04475 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III E2544_04475 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain E2544_04485 PF01565 FAD binding domain E2544_04485 PF02913 FAD linked oxidases, C-terminal domain E2544_04490 PF00486 Transcriptional regulatory protein, C terminal E2544_04490 PF00072 Response regulator receiver domain E2544_04495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2544_04495 PF00512 His Kinase A (phospho-acceptor) domain E2544_04495 PF08521 Two-component sensor kinase N-terminal E2544_04505 PF07729 FCD domain E2544_04505 PF00392 Bacterial regulatory proteins, gntR family E2544_04510 PF00884 Sulfatase E2544_04515 PF01553 Acyltransferase E2544_04525 PF04209 homogentisate 1,2-dioxygenase E2544_04530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_04530 PF03466 LysR substrate binding domain E2544_04540 PF01494 FAD binding domain E2544_04550 PF06827 Zinc finger found in FPG and IleRS E2544_04550 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain E2544_04550 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain E2544_04560 PF03550 Outer membrane lipoprotein LolB E2544_04565 PF08544 GHMP kinases C terminal E2544_04565 PF00288 GHMP kinases N terminal domain E2544_04575 PF14572 Phosphoribosyl synthetase-associated domain E2544_04575 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase E2544_04580 PF01386 Ribosomal L25p family E2544_04580 PF14693 Ribosomal protein TL5, C-terminal domain E2544_04585 PF01195 Peptidyl-tRNA hydrolase E2544_04595 PF06071 Protein of unknown function (DUF933) E2544_04595 PF01926 50S ribosome-binding GTPase E2544_04605 PF03737 Aldolase/RraA E2544_04610 PF03401 Tripartite tricarboxylate transporter family receptor E2544_04615 PF00180 Isocitrate/isopropylmalate dehydrogenase E2544_04615 PF03737 Aldolase/RraA E2544_04620 PF03466 LysR substrate binding domain E2544_04620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_04630 PF07690 Major Facilitator Superfamily E2544_04645 PF03594 Benzoate membrane transport protein E2544_04650 PF00037 4Fe-4S binding domain E2544_04655 PF01467 Cytidylyltransferase-like E2544_04665 PF00448 SRP54-type protein, GTPase domain E2544_04665 PF02881 SRP54-type protein, helical bundle domain E2544_04680 PF00528 Binding-protein-dependent transport system inner membrane component E2544_04685 PF00528 Binding-protein-dependent transport system inner membrane component E2544_04690 PF00005 ABC transporter E2544_04710 PF00925 GTP cyclohydrolase II E2544_04710 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase E2544_04715 PF00885 6,7-dimethyl-8-ribityllumazine synthase E2544_04720 PF01029 NusB family E2544_04725 PF02769 AIR synthase related protein, C-terminal domain E2544_04725 PF00586 AIR synthase related protein, N-terminal domain E2544_04730 PF04608 Phosphatidylglycerophosphatase A E2544_04735 PF02464 Competence-damaged protein E2544_04740 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family E2544_04745 PF07992 Pyridine nucleotide-disulphide oxidoreductase E2544_04750 PF01219 Prokaryotic diacylglycerol kinase E2544_04755 PF07729 FCD domain E2544_04755 PF00392 Bacterial regulatory proteins, gntR family E2544_04760 PF00107 Zinc-binding dehydrogenase E2544_04760 PF08240 Alcohol dehydrogenase GroES-like domain E2544_04765 PF03480 Bacterial extracellular solute-binding protein, family 7 E2544_04775 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component E2544_04785 PF01557 Fumarylacetoacetate (FAA) hydrolase family E2544_04790 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus E2544_04790 PF08666 SAF domain E2544_04795 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain E2544_04795 PF13378 Enolase C-terminal domain-like E2544_04800 PF08125 Mannitol dehydrogenase C-terminal domain E2544_04800 PF01232 Mannitol dehydrogenase Rossmann domain E2544_04805 PF02615 Malate/L-lactate dehydrogenase E2544_04815 PF06052 3-hydroxyanthranilic acid dioxygenase E2544_04820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_04820 PF03466 LysR substrate binding domain E2544_04825 PF01042 Endoribonuclease L-PSP E2544_04830 PF00171 Aldehyde dehydrogenase family E2544_04835 PF01047 MarR family E2544_04845 PF00118 TCP-1/cpn60 chaperonin family E2544_04850 PF00166 Chaperonin 10 Kd subunit E2544_04860 PF00465 Iron-containing alcohol dehydrogenase E2544_04865 PF00083 Sugar (and other) transporter E2544_04870 PF00171 Aldehyde dehydrogenase family E2544_04875 PF03466 LysR substrate binding domain E2544_04875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_04880 PF04909 Amidohydrolase E2544_04885 PF02515 CoA-transferase family III E2544_04890 PF00378 Enoyl-CoA hydratase/isomerase E2544_04905 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase E2544_04905 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase E2544_04910 PF01070 FMN-dependent dehydrogenase E2544_04920 PF00892 EamA-like transporter family E2544_04940 PF05401 Nodulation protein S (NodS) E2544_04950 PF01965 DJ-1/PfpI family E2544_04960 PF02910 Fumarate reductase flavoprotein C-term E2544_04960 PF00890 FAD binding domain E2544_04980 PF00528 Binding-protein-dependent transport system inner membrane component E2544_04985 PF00005 ABC transporter E2544_05005 PF02653 Branched-chain amino acid transport system / permease component E2544_05010 PF00005 ABC transporter E2544_05010 PF12399 Branched-chain amino acid ATP-binding cassette transporter E2544_05015 PF00005 ABC transporter E2544_05020 PF00890 FAD binding domain E2544_05020 PF02910 Fumarate reductase flavoprotein C-term E2544_05035 PF04909 Amidohydrolase E2544_05040 PF00180 Isocitrate/isopropylmalate dehydrogenase E2544_05045 PF03401 Tripartite tricarboxylate transporter family receptor E2544_05050 PF03401 Tripartite tricarboxylate transporter family receptor E2544_05055 PF07729 FCD domain E2544_05055 PF00392 Bacterial regulatory proteins, gntR family E2544_05060 PF04055 Radical SAM superfamily E2544_05065 PF03466 LysR substrate binding domain E2544_05065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_05080 PF03737 Aldolase/RraA E2544_05085 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain E2544_05085 PF13378 Enolase C-terminal domain-like E2544_05090 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E2544_05090 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E2544_05100 PF03401 Tripartite tricarboxylate transporter family receptor E2544_05105 PF03401 Tripartite tricarboxylate transporter family receptor E2544_05115 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E2544_05115 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E2544_05115 PF01842 ACT domain E2544_05120 PF03737 Aldolase/RraA E2544_05125 PF03401 Tripartite tricarboxylate transporter family receptor E2544_05140 PF03466 LysR substrate binding domain E2544_05140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_05155 PF08450 SMP-30/Gluconolactonase/LRE-like region E2544_05160 PF03401 Tripartite tricarboxylate transporter family receptor E2544_05170 PF07715 TonB-dependent Receptor Plug Domain E2544_05170 PF07660 Secretin and TonB N terminus short domain E2544_05170 PF00593 TonB dependent receptor E2544_05180 PF08281 Sigma-70, region 4 E2544_05180 PF04542 Sigma-70 region 2 E2544_05190 PF00378 Enoyl-CoA hydratase/isomerase E2544_05195 PF00171 Aldehyde dehydrogenase family E2544_05200 PF01266 FAD dependent oxidoreductase E2544_05205 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E2544_05205 PF00005 ABC transporter E2544_05210 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E2544_05210 PF00005 ABC transporter E2544_05215 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E2544_05220 PF12911 N-terminal TM domain of oligopeptide transport permease C E2544_05220 PF00528 Binding-protein-dependent transport system inner membrane component E2544_05225 PF00528 Binding-protein-dependent transport system inner membrane component E2544_05230 PF00378 Enoyl-CoA hydratase/isomerase E2544_05240 PF00378 Enoyl-CoA hydratase/isomerase E2544_05250 PF00732 GMC oxidoreductase E2544_05250 PF05199 GMC oxidoreductase E2544_05255 PF00205 Thiamine pyrophosphate enzyme, central domain E2544_05255 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E2544_05255 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain E2544_05260 PF03401 Tripartite tricarboxylate transporter family receptor E2544_05265 PF00392 Bacterial regulatory proteins, gntR family E2544_05265 PF07729 FCD domain E2544_05270 PF02913 FAD linked oxidases, C-terminal domain E2544_05270 PF01565 FAD binding domain E2544_05275 PF02754 Cysteine-rich domain E2544_05275 PF13183 4Fe-4S dicluster domain E2544_05285 PF03401 Tripartite tricarboxylate transporter family receptor E2544_05290 PF00561 alpha/beta hydrolase fold E2544_05300 PF00893 Small Multidrug Resistance protein E2544_05305 PF00440 Bacterial regulatory proteins, tetR family E2544_05320 PF03466 LysR substrate binding domain E2544_05320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_05325 PF01266 FAD dependent oxidoreductase E2544_05330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_05330 PF03466 LysR substrate binding domain E2544_05335 PF13404 AsnC-type helix-turn-helix domain E2544_05335 PF01037 Lrp/AsnC ligand binding domain E2544_05340 PF01053 Cys/Met metabolism PLP-dependent enzyme E2544_05345 PF00701 Dihydrodipicolinate synthetase family E2544_05350 PF00106 short chain dehydrogenase E2544_05355 PF03401 Tripartite tricarboxylate transporter family receptor E2544_05360 PF01568 Molydopterin dinucleotide binding domain E2544_05360 PF00384 Molybdopterin oxidoreductase E2544_05400 PF17871 AAA lid domain E2544_05400 PF07724 AAA domain (Cdc48 subfamily) E2544_05400 PF10431 C-terminal, D2-small domain, of ClpB protein E2544_05400 PF00004 ATPase family associated with various cellular activities (AAA) E2544_05405 PF04717 Type VI secretion system, phage-baseplate injector E2544_05430 PF00375 Sodium:dicarboxylate symporter family E2544_05435 PF01177 Asp/Glu/Hydantoin racemase E2544_05470 PF00196 Bacterial regulatory proteins, luxR family E2544_05470 PF00072 Response regulator receiver domain E2544_05475 PF00593 TonB dependent receptor E2544_05475 PF07715 TonB-dependent Receptor Plug Domain E2544_05495 PF11806 Domain of unknown function (DUF3327) E2544_05495 PF00756 Putative esterase E2544_05500 PF01638 HxlR-like helix-turn-helix E2544_05510 PF00924 Mechanosensitive ion channel E2544_05520 PF03466 LysR substrate binding domain E2544_05520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_05540 PF02525 Flavodoxin-like fold E2544_05545 PF07729 FCD domain E2544_05545 PF00392 Bacterial regulatory proteins, gntR family E2544_05550 PF01557 Fumarylacetoacetate (FAA) hydrolase family E2544_05555 PF03401 Tripartite tricarboxylate transporter family receptor E2544_05565 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily E2544_05570 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E2544_05570 PF02770 Acyl-CoA dehydrogenase, middle domain E2544_05570 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E2544_05575 PF03401 Tripartite tricarboxylate transporter family receptor E2544_05580 PF03060 Nitronate monooxygenase E2544_05585 PF09339 IclR helix-turn-helix domain E2544_05590 PF00465 Iron-containing alcohol dehydrogenase E2544_05595 PF00171 Aldehyde dehydrogenase family E2544_05600 PF03401 Tripartite tricarboxylate transporter family receptor E2544_05610 PF01575 MaoC like domain E2544_05610 PF00171 Aldehyde dehydrogenase family E2544_05640 PF00296 Luciferase-like monooxygenase E2544_05645 PF00043 Glutathione S-transferase, C-terminal domain E2544_05645 PF02798 Glutathione S-transferase, N-terminal domain E2544_05650 PF03466 LysR substrate binding domain E2544_05650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_05655 PF01047 MarR family E2544_05660 PF00107 Zinc-binding dehydrogenase E2544_05660 PF16884 N-terminal domain of oxidoreductase E2544_05665 PF01575 MaoC like domain E2544_05670 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E2544_05670 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E2544_05670 PF02770 Acyl-CoA dehydrogenase, middle domain E2544_05675 PF05853 beta-keto acid cleavage enzyme E2544_05680 PF02515 CoA-transferase family III E2544_05685 PF00378 Enoyl-CoA hydratase/isomerase E2544_05690 PF03328 HpcH/HpaI aldolase/citrate lyase family E2544_05695 PF03401 Tripartite tricarboxylate transporter family receptor E2544_05700 PF01425 Amidase E2544_05705 PF00005 ABC transporter E2544_05705 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E2544_05710 PF00005 ABC transporter E2544_05710 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E2544_05715 PF00528 Binding-protein-dependent transport system inner membrane component E2544_05720 PF00528 Binding-protein-dependent transport system inner membrane component E2544_05725 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E2544_05730 PF07171 MlrC C-terminus E2544_05730 PF07364 Metallopeptidase family M81 E2544_05735 PF07171 MlrC C-terminus E2544_05735 PF07364 Metallopeptidase family M81 E2544_05740 PF07715 TonB-dependent Receptor Plug Domain E2544_05740 PF00593 TonB dependent receptor E2544_05760 PF04954 Siderophore-interacting protein E2544_05760 PF00005 ABC transporter E2544_05760 PF00664 ABC transporter transmembrane region E2544_05760 PF08021 Siderophore-interacting FAD-binding domain E2544_05765 PF00005 ABC transporter E2544_05770 PF01032 FecCD transport family E2544_05775 PF01032 FecCD transport family E2544_05780 PF00005 ABC transporter E2544_05785 PF01497 Periplasmic binding protein E2544_05790 PF00593 TonB dependent receptor E2544_05790 PF07715 TonB-dependent Receptor Plug Domain E2544_05795 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain E2544_05795 PF00591 Glycosyl transferase family, a/b domain E2544_05795 PF02885 Glycosyl transferase family, helical bundle domain E2544_05800 PF00753 Metallo-beta-lactamase superfamily E2544_05800 PF10996 Beta-Casp domain E2544_05800 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain E2544_05805 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase E2544_05805 PF09364 XFP N-terminal domain E2544_05805 PF09363 XFP C-terminal domain E2544_05820 PF00144 Beta-lactamase E2544_05830 PF00144 Beta-lactamase E2544_05845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_05845 PF03466 LysR substrate binding domain E2544_05850 PF00291 Pyridoxal-phosphate dependent enzyme E2544_05855 PF00290 Tryptophan synthase alpha chain E2544_05860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2544_05860 PF13426 PAS domain E2544_05860 PF08448 PAS fold E2544_05860 PF00512 His Kinase A (phospho-acceptor) domain E2544_05860 PF00072 Response regulator receiver domain E2544_05890 PF01810 LysE type translocator E2544_05900 PF00378 Enoyl-CoA hydratase/isomerase E2544_05905 PF02515 CoA-transferase family III E2544_05910 PF03466 LysR substrate binding domain E2544_05910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_05915 PF03401 Tripartite tricarboxylate transporter family receptor E2544_05920 PF00596 Class II Aldolase and Adducin N-terminal domain E2544_05950 PF04261 Dyp-type peroxidase family E2544_05955 PF00593 TonB dependent receptor E2544_05955 PF07660 Secretin and TonB N terminus short domain E2544_05955 PF07715 TonB-dependent Receptor Plug Domain E2544_05965 PF00248 Aldo/keto reductase family E2544_05970 PF03795 YCII-related domain E2544_05990 PF03352 Methyladenine glycosylase E2544_05990 PF00958 GMP synthase C terminal domain E2544_05990 PF13673 Acetyltransferase (GNAT) domain E2544_05990 PF13302 Acetyltransferase (GNAT) domain E2544_05990 PF00117 Glutamine amidotransferase class-I E2544_06010 PF02798 Glutathione S-transferase, N-terminal domain E2544_06020 PF13609 Gram-negative porin E2544_06030 PF03626 Prokaryotic Cytochrome C oxidase subunit IV E2544_06035 PF00510 Cytochrome c oxidase subunit III E2544_06040 PF00115 Cytochrome C and Quinol oxidase polypeptide I E2544_06045 PF06481 COX Aromatic Rich Motif E2544_06045 PF00116 Cytochrome C oxidase subunit II, periplasmic domain E2544_06050 PF00083 Sugar (and other) transporter E2544_06050 PF07690 Major Facilitator Superfamily E2544_06055 PF00497 Bacterial extracellular solute-binding proteins, family 3 E2544_06060 PF00202 Aminotransferase class-III E2544_06070 PF00850 Histone deacetylase domain E2544_06095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_06095 PF03466 LysR substrate binding domain E2544_06100 PF03741 Integral membrane protein TerC family E2544_06120 PF12833 Helix-turn-helix domain E2544_06120 PF02311 AraC-like ligand binding domain E2544_06125 PF07690 Major Facilitator Superfamily E2544_06135 PF01447 Thermolysin metallopeptidase, catalytic domain E2544_06135 PF02868 Thermolysin metallopeptidase, alpha-helical domain E2544_06135 PF16485 Protealysin propeptide E2544_06140 PF01145 SPFH domain / Band 7 family E2544_06145 PF02378 Phosphotransferase system, EIIC E2544_06155 PF08281 Sigma-70, region 4 E2544_06155 PF04542 Sigma-70 region 2 E2544_06160 PF16220 Domain of unknown function (DUF4880) E2544_06160 PF04773 FecR protein E2544_06165 PF07715 TonB-dependent Receptor Plug Domain E2544_06165 PF00593 TonB dependent receptor E2544_06175 PF00330 Aconitase family (aconitate hydratase) E2544_06175 PF00694 Aconitase C-terminal domain E2544_06180 PF13419 Haloacid dehalogenase-like hydrolase E2544_06190 PF02308 MgtC family E2544_06205 PF12833 Helix-turn-helix domain E2544_06210 PF03781 Sulfatase-modifying factor enzyme 1 E2544_06215 PF13532 2OG-Fe(II) oxygenase superfamily E2544_06220 PF13091 PLD-like domain E2544_06225 PF01381 Helix-turn-helix E2544_06225 PF07883 Cupin domain E2544_06230 PF00583 Acetyltransferase (GNAT) family E2544_06255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_06255 PF03466 LysR substrate binding domain E2544_06270 PF00892 EamA-like transporter family E2544_06295 PF00390 Malic enzyme, N-terminal domain E2544_06295 PF01515 Phosphate acetyl/butaryl transferase E2544_06295 PF03949 Malic enzyme, NAD binding domain E2544_06310 PF04102 SlyX E2544_06315 PF00593 TonB dependent receptor E2544_06315 PF07715 TonB-dependent Receptor Plug Domain E2544_06320 PF04891 NifQ E2544_06325 PF03626 Prokaryotic Cytochrome C oxidase subunit IV E2544_06330 PF00510 Cytochrome c oxidase subunit III E2544_06335 PF00115 Cytochrome C and Quinol oxidase polypeptide I E2544_06340 PF00116 Cytochrome C oxidase subunit II, periplasmic domain E2544_06340 PF06481 COX Aromatic Rich Motif E2544_06345 PF00072 Response regulator receiver domain E2544_06350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2544_06350 PF00512 His Kinase A (phospho-acceptor) domain E2544_06365 PF02630 SCO1/SenC E2544_06375 PF01551 Peptidase family M23 E2544_06375 PF01476 LysM domain E2544_06380 PF00005 ABC transporter E2544_06385 PF00528 Binding-protein-dependent transport system inner membrane component E2544_06390 PF00497 Bacterial extracellular solute-binding proteins, family 3 E2544_06395 PF03576 Peptidase family S58 E2544_06400 PF03006 Haemolysin-III related E2544_06405 PF01037 Lrp/AsnC ligand binding domain E2544_06410 PF00266 Aminotransferase class-V E2544_06415 PF00324 Amino acid permease E2544_06425 PF08279 HTH domain E2544_06425 PF13280 WYL domain E2544_06435 PF03401 Tripartite tricarboxylate transporter family receptor E2544_06455 PF04542 Sigma-70 region 2 E2544_06455 PF08281 Sigma-70, region 4 E2544_06465 PF00593 TonB dependent receptor E2544_06465 PF07715 TonB-dependent Receptor Plug Domain E2544_06465 PF04886 PT repeat E2544_06470 PF05171 Haemin-degrading HemS.ChuX domain E2544_06475 PF01497 Periplasmic binding protein E2544_06480 PF01032 FecCD transport family E2544_06485 PF00005 ABC transporter E2544_06490 PF04461 Protein of unknown function (DUF520) E2544_06495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_06495 PF03466 LysR substrate binding domain E2544_06500 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain E2544_06500 PF00730 HhH-GPD superfamily base excision DNA repair protein E2544_06505 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain E2544_06505 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain E2544_06515 PF00180 Isocitrate/isopropylmalate dehydrogenase E2544_06520 PF03401 Tripartite tricarboxylate transporter family receptor E2544_06525 PF01569 PAP2 superfamily E2544_06530 PF03960 ArsC family E2544_06540 PF00593 TonB dependent receptor E2544_06540 PF07715 TonB-dependent Receptor Plug Domain E2544_06550 PF00005 ABC transporter E2544_06555 PF00005 ABC transporter E2544_06555 PF12399 Branched-chain amino acid ATP-binding cassette transporter E2544_06575 PF01425 Amidase E2544_06580 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain E2544_06580 PF00364 Biotin-requiring enzyme E2544_06580 PF00364 Biotin-requiring enzyme E2544_06580 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain E2544_06580 PF00289 Biotin carboxylase, N-terminal domain E2544_06580 PF00289 Biotin carboxylase, N-terminal domain E2544_06580 PF02785 Biotin carboxylase C-terminal domain E2544_06580 PF02785 Biotin carboxylase C-terminal domain E2544_06585 PF07729 FCD domain E2544_06585 PF00392 Bacterial regulatory proteins, gntR family E2544_06595 PF08281 Sigma-70, region 4 E2544_06595 PF04542 Sigma-70 region 2 E2544_06605 PF00583 Acetyltransferase (GNAT) family E2544_06610 PF01636 Phosphotransferase enzyme family E2544_06615 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E2544_06615 PF02770 Acyl-CoA dehydrogenase, middle domain E2544_06615 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E2544_06625 PF01042 Endoribonuclease L-PSP E2544_06630 PF07859 alpha/beta hydrolase fold E2544_06635 PF00005 ABC transporter E2544_06640 PF12399 Branched-chain amino acid ATP-binding cassette transporter E2544_06640 PF00005 ABC transporter E2544_06645 PF11862 Domain of unknown function (DUF3382) E2544_06645 PF02653 Branched-chain amino acid transport system / permease component E2544_06650 PF02653 Branched-chain amino acid transport system / permease component E2544_06665 PF13458 Periplasmic binding protein E2544_06670 PF00392 Bacterial regulatory proteins, gntR family E2544_06670 PF07702 UTRA domain E2544_06680 PF13193 AMP-binding enzyme C-terminal domain E2544_06680 PF00501 AMP-binding enzyme E2544_06700 PF07995 Glucose / Sorbosone dehydrogenase E2544_06705 PF00970 Oxidoreductase FAD-binding domain E2544_06705 PF00111 2Fe-2S iron-sulfur cluster binding domain E2544_06705 PF00175 Oxidoreductase NAD-binding domain E2544_06720 PF00072 Response regulator receiver domain E2544_06720 PF00486 Transcriptional regulatory protein, C terminal E2544_06725 PF08918 PhoQ Sensor E2544_06725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2544_06740 PF01177 Asp/Glu/Hydantoin racemase E2544_06745 PF03466 LysR substrate binding domain E2544_06745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_06765 PF05175 Methyltransferase small domain E2544_06775 PF02634 FdhD/NarQ family E2544_06780 PF12838 4Fe-4S dicluster domain E2544_06780 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region E2544_06780 PF04879 Molybdopterin oxidoreductase Fe4S4 domain E2544_06780 PF01568 Molydopterin dinucleotide binding domain E2544_06780 PF00384 Molybdopterin oxidoreductase E2544_06785 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit E2544_06785 PF00037 4Fe-4S binding domain E2544_06785 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region E2544_06800 PF06463 Molybdenum Cofactor Synthesis C E2544_06800 PF04055 Radical SAM superfamily E2544_06805 PF12804 MobA-like NTP transferase domain E2544_06810 PF03453 MoeA N-terminal region (domain I and II) E2544_06810 PF03454 MoeA C-terminal region (domain IV) E2544_06810 PF00994 Probable molybdopterin binding domain E2544_06815 PF00994 Probable molybdopterin binding domain E2544_06830 PF01967 MoaC family E2544_06840 PF01738 Dienelactone hydrolase family E2544_06850 PF08534 Redoxin E2544_06865 PF04055 Radical SAM superfamily E2544_06865 PF06968 Biotin and Thiamin Synthesis associated domain E2544_06870 PF08447 PAS fold E2544_06870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2544_06870 PF13493 Domain of unknown function (DUF4118) E2544_06870 PF00512 His Kinase A (phospho-acceptor) domain E2544_06870 PF13426 PAS domain E2544_06870 PF00989 PAS fold E2544_06905 PF00248 Aldo/keto reductase family E2544_06910 PF00795 Carbon-nitrogen hydrolase E2544_06915 PF03471 Transporter associated domain E2544_06915 PF00571 CBS domain E2544_06920 PF02130 Uncharacterized protein family UPF0054 E2544_06925 PF02562 PhoH-like protein E2544_06930 PF00919 Uncharacterized protein family UPF0004 E2544_06930 PF01938 TRAM domain E2544_06930 PF04055 Radical SAM superfamily E2544_06940 PF02272 DHHA1 domain E2544_06940 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain E2544_06940 PF01411 tRNA synthetases class II (A) E2544_06950 PF00574 Clp protease E2544_06960 PF01022 Bacterial regulatory protein, arsR family E2544_06965 PF07549 SecD/SecF GG Motif E2544_06965 PF02355 Protein export membrane protein E2544_06970 PF02355 Protein export membrane protein E2544_06970 PF07549 SecD/SecF GG Motif E2544_06970 PF13721 SecD export protein N-terminal TM region E2544_06975 PF02699 Preprotein translocase subunit E2544_06980 PF01702 Queuine tRNA-ribosyltransferase E2544_06985 PF02547 Queuosine biosynthesis protein E2544_07005 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family E2544_07015 PF14824 Sirohaem biosynthesis protein central E2544_07015 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E2544_07015 PF10414 Sirohaem synthase dimerisation region E2544_07030 PF00528 Binding-protein-dependent transport system inner membrane component E2544_07035 PF00005 ABC transporter E2544_07040 PF18267 Rubredoxin NAD+ reductase C-terminal domain E2544_07040 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain E2544_07040 PF04324 BFD-like [2Fe-2S] binding domain E2544_07040 PF01077 Nitrite and sulphite reductase 4Fe-4S domain E2544_07040 PF07992 Pyridine nucleotide-disulphide oxidoreductase E2544_07045 PF04879 Molybdopterin oxidoreductase Fe4S4 domain E2544_07045 PF01568 Molydopterin dinucleotide binding domain E2544_07045 PF00384 Molybdopterin oxidoreductase E2544_07055 PF05957 Bacterial protein of unknown function (DUF883) E2544_07070 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase E2544_07075 PF01464 Transglycosylase SLT domain E2544_07075 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain E2544_07080 PF00155 Aminotransferase class I and II E2544_07090 PF01515 Phosphate acetyl/butaryl transferase E2544_07090 PF00390 Malic enzyme, N-terminal domain E2544_07090 PF03949 Malic enzyme, NAD binding domain E2544_07100 PF01337 Barstar (barnase inhibitor) E2544_07105 PF04452 RNA methyltransferase E2544_07110 PF02779 Transketolase, pyrimidine binding domain E2544_07110 PF00456 Transketolase, thiamine diphosphate binding domain E2544_07110 PF02780 Transketolase, C-terminal domain E2544_07115 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain E2544_07115 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain E2544_07120 PF00162 Phosphoglycerate kinase E2544_07125 PF03401 Tripartite tricarboxylate transporter family receptor E2544_07130 PF01740 STAS domain E2544_07130 PF00916 Sulfate permease family E2544_07140 PF00871 Acetokinase family E2544_07145 PF01515 Phosphate acetyl/butaryl transferase E2544_07150 PF11339 Protein of unknown function (DUF3141) E2544_07160 PF14834 Glutathione S-transferase, C-terminal domain E2544_07160 PF02798 Glutathione S-transferase, N-terminal domain E2544_07170 PF00226 DnaJ domain E2544_07170 PF01556 DnaJ C terminal domain E2544_07200 PF01384 Phosphate transporter family E2544_07210 PF00994 Probable molybdopterin binding domain E2544_07220 PF08525 Opacity-associated protein A N-terminal motif E2544_07220 PF01476 LysM domain E2544_07220 PF01551 Peptidase family M23 E2544_07230 PF01176 Translation initiation factor 1A / IF-1 E2544_07250 PF00005 ABC transporter E2544_07260 PF00528 Binding-protein-dependent transport system inner membrane component E2544_07270 PF03401 Tripartite tricarboxylate transporter family receptor E2544_07280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_07280 PF03466 LysR substrate binding domain E2544_07290 PF06299 Protein of unknown function (DUF1045) E2544_07295 PF07969 Amidohydrolase family E2544_07300 PF00392 Bacterial regulatory proteins, gntR family E2544_07300 PF07702 UTRA domain E2544_07305 PF06754 Phosphonate metabolism protein PhnG E2544_07315 PF05861 Bacterial phosphonate metabolism protein (PhnI) E2544_07320 PF06007 Phosphonate metabolism protein PhnJ E2544_07325 PF00005 ABC transporter E2544_07330 PF00005 ABC transporter E2544_07335 PF07969 Amidohydrolase family E2544_07355 PF00375 Sodium:dicarboxylate symporter family E2544_07365 PF01116 Fructose-bisphosphate aldolase class-II E2544_07375 PF01259 SAICAR synthetase E2544_07380 PF02600 Disulfide bond formation protein DsbB E2544_07385 PF00731 AIR carboxylase E2544_07390 PF02222 ATP-grasp domain E2544_07390 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain E2544_07395 PF01300 Telomere recombination E2544_07395 PF03481 Putative GTP-binding controlling metal-binding E2544_07400 PF09339 IclR helix-turn-helix domain E2544_07400 PF01614 Bacterial transcriptional regulator E2544_07405 PF01144 Coenzyme A transferase E2544_07410 PF01144 Coenzyme A transferase E2544_07415 PF03401 Tripartite tricarboxylate transporter family receptor E2544_07420 PF00497 Bacterial extracellular solute-binding proteins, family 3 E2544_07425 PF01614 Bacterial transcriptional regulator E2544_07425 PF09339 IclR helix-turn-helix domain E2544_07435 PF00497 Bacterial extracellular solute-binding proteins, family 3 E2544_07445 PF00005 ABC transporter E2544_07450 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E2544_07450 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain E2544_07455 PF00005 ABC transporter E2544_07460 PF00005 ABC transporter E2544_07460 PF12399 Branched-chain amino acid ATP-binding cassette transporter E2544_07470 PF02653 Branched-chain amino acid transport system / permease component E2544_07485 PF00501 AMP-binding enzyme E2544_07485 PF13193 AMP-binding enzyme C-terminal domain E2544_07495 PF01202 Shikimate kinase E2544_07515 PF01575 MaoC like domain E2544_07520 PF07690 Major Facilitator Superfamily E2544_07525 PF03466 LysR substrate binding domain E2544_07525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_07540 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E2544_07540 PF02770 Acyl-CoA dehydrogenase, middle domain E2544_07540 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E2544_07545 PF00205 Thiamine pyrophosphate enzyme, central domain E2544_07545 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E2544_07545 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain E2544_07550 PF03466 LysR substrate binding domain E2544_07550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_07555 PF00589 Phage integrase family E2544_07555 PF02899 Phage integrase, N-terminal SAM-like domain E2544_07560 PF04073 Aminoacyl-tRNA editing domain E2544_07565 PF01174 SNO glutamine amidotransferase family E2544_07570 PF00107 Zinc-binding dehydrogenase E2544_07570 PF08240 Alcohol dehydrogenase GroES-like domain E2544_07580 PF00768 D-alanyl-D-alanine carboxypeptidase E2544_07605 PF12705 PD-(D/E)XK nuclease superfamily E2544_07605 PF00580 UvrD/REP helicase N-terminal domain E2544_07605 PF13361 UvrD-like helicase C-terminal domain E2544_07615 PF08402 TOBE domain E2544_07615 PF00005 ABC transporter E2544_07625 PF00528 Binding-protein-dependent transport system inner membrane component E2544_07630 PF00528 Binding-protein-dependent transport system inner membrane component E2544_07645 PF01266 FAD dependent oxidoreductase E2544_07660 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding E2544_07660 PF12169 DNA polymerase III subunits gamma and tau domain III E2544_07660 PF12170 DNA polymerase III tau subunit V interacting with alpha E2544_07665 PF02575 YbaB/EbfC DNA-binding family E2544_07670 PF13662 Toprim domain E2544_07670 PF02132 RecR protein E2544_07675 PF02515 CoA-transferase family III E2544_07685 PF00005 ABC transporter E2544_07690 PF00528 Binding-protein-dependent transport system inner membrane component E2544_07700 PF00491 Arginase family E2544_07710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_07710 PF03466 LysR substrate binding domain E2544_07715 PF00923 Transaldolase/Fructose-6-phosphate aldolase E2544_07720 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain E2544_07720 PF00117 Glutamine amidotransferase class-I E2544_07725 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain E2544_07725 PF02142 MGS-like domain E2544_07725 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain E2544_07730 PF00106 short chain dehydrogenase E2544_07735 PF00300 Histidine phosphatase superfamily (branch 1) E2544_07740 PF03466 LysR substrate binding domain E2544_07740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_07745 PF00005 ABC transporter E2544_07745 PF08402 TOBE domain E2544_07750 PF00528 Binding-protein-dependent transport system inner membrane component E2544_07765 PF00860 Permease family E2544_07770 PF02203 Tar ligand binding domain homologue E2544_07770 PF00672 HAMP domain E2544_07770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E2544_07775 PF03449 Transcription elongation factor, N-terminal E2544_07775 PF01272 Transcription elongation factor, GreA/GreB, C-term E2544_07780 PF01985 CRS1 / YhbY (CRM) domain E2544_07785 PF01728 FtsJ-like methyltransferase E2544_07790 PF01434 Peptidase family M41 E2544_07790 PF00004 ATPase family associated with various cellular activities (AAA) E2544_07790 PF17862 AAA+ lid domain E2544_07790 PF06480 FtsH Extracellular E2544_07795 PF00809 Pterin binding enzyme E2544_07800 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain E2544_07800 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I E2544_07800 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II E2544_07800 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III E2544_07810 PF02541 Ppx/GppA phosphatase family E2544_07815 PF17941 Polyphosphate kinase C-terminal domain 1 E2544_07815 PF13090 Polyphosphate kinase C-terminal domain 2 E2544_07815 PF02503 Polyphosphate kinase middle domain E2544_07815 PF13089 Polyphosphate kinase N-terminal domain E2544_07820 PF12849 PBP superfamily domain E2544_07825 PF00528 Binding-protein-dependent transport system inner membrane component E2544_07830 PF00528 Binding-protein-dependent transport system inner membrane component E2544_07835 PF00005 ABC transporter E2544_07850 PF00313 'Cold-shock' DNA-binding domain E2544_07860 PF01966 HD domain E2544_07865 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E2544_07865 PF02770 Acyl-CoA dehydrogenase, middle domain E2544_07865 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E2544_07870 PF01575 MaoC like domain E2544_07890 PF00378 Enoyl-CoA hydratase/isomerase E2544_07895 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E2544_07895 PF02770 Acyl-CoA dehydrogenase, middle domain E2544_07895 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E2544_07900 PF03401 Tripartite tricarboxylate transporter family receptor E2544_07910 PF00378 Enoyl-CoA hydratase/isomerase E2544_07920 PF01799 [2Fe-2S] binding domain E2544_07920 PF00111 2Fe-2S iron-sulfur cluster binding domain E2544_07925 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase E2544_07930 PF00676 Dehydrogenase E1 component E2544_07935 PF02779 Transketolase, pyrimidine binding domain E2544_07935 PF02780 Transketolase, C-terminal domain E2544_07940 PF00378 Enoyl-CoA hydratase/isomerase E2544_07945 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) E2544_07945 PF02817 e3 binding domain E2544_07945 PF00364 Biotin-requiring enzyme E2544_07950 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E2544_07950 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E2544_07950 PF02770 Acyl-CoA dehydrogenase, middle domain E2544_07955 PF13193 AMP-binding enzyme C-terminal domain E2544_07955 PF00501 AMP-binding enzyme E2544_07965 PF13458 Periplasmic binding protein E2544_07970 PF02653 Branched-chain amino acid transport system / permease component E2544_07975 PF12399 Branched-chain amino acid ATP-binding cassette transporter E2544_07975 PF00005 ABC transporter E2544_07980 PF00005 ABC transporter E2544_07985 PF07992 Pyridine nucleotide-disulphide oxidoreductase E2544_07985 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E2544_08015 PF00857 Isochorismatase family E2544_08025 PF03466 LysR substrate binding domain E2544_08025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_08035 PF00356 Bacterial regulatory proteins, lacI family E2544_08045 PF01042 Endoribonuclease L-PSP E2544_08050 PF00497 Bacterial extracellular solute-binding proteins, family 3 E2544_08055 PF00005 ABC transporter E2544_08075 PF12833 Helix-turn-helix domain E2544_08075 PF06719 AraC-type transcriptional regulator N-terminus E2544_08080 PF00248 Aldo/keto reductase family E2544_08090 PF05724 Thiopurine S-methyltransferase (TPMT) E2544_08100 PF16197 Ketoacyl-synthetase C-terminal extension E2544_08100 PF00107 Zinc-binding dehydrogenase E2544_08100 PF00698 Acyl transferase domain E2544_08100 PF00109 Beta-ketoacyl synthase, N-terminal domain E2544_08100 PF02801 Beta-ketoacyl synthase, C-terminal domain E2544_08100 PF08659 KR domain E2544_08100 PF00550 Phosphopantetheine attachment site E2544_08100 PF14765 Polyketide synthase dehydratase E2544_08100 PF08240 Alcohol dehydrogenase GroES-like domain E2544_08105 PF00005 ABC transporter E2544_08110 PF00005 ABC transporter E2544_08110 PF12399 Branched-chain amino acid ATP-binding cassette transporter E2544_08115 PF02653 Branched-chain amino acid transport system / permease component E2544_08120 PF13458 Periplasmic binding protein E2544_08130 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain E2544_08130 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain E2544_08135 PF05853 beta-keto acid cleavage enzyme E2544_08140 PF00465 Iron-containing alcohol dehydrogenase E2544_08145 PF07729 FCD domain E2544_08145 PF00392 Bacterial regulatory proteins, gntR family E2544_08150 PF00456 Transketolase, thiamine diphosphate binding domain E2544_08155 PF02780 Transketolase, C-terminal domain E2544_08155 PF02779 Transketolase, pyrimidine binding domain E2544_08160 PF18317 Shikimate 5'-dehydrogenase C-terminal domain E2544_08160 PF08501 Shikimate dehydrogenase substrate binding domain E2544_08160 PF01488 Shikimate / quinate 5-dehydrogenase E2544_08165 PF05199 GMC oxidoreductase E2544_08165 PF00732 GMC oxidoreductase E2544_08170 PF05544 Proline racemase E2544_08175 PF00528 Binding-protein-dependent transport system inner membrane component E2544_08180 PF00528 Binding-protein-dependent transport system inner membrane component E2544_08185 PF08402 TOBE domain E2544_08185 PF00005 ABC transporter E2544_08205 PF08447 PAS fold E2544_08205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E2544_08205 PF13426 PAS domain E2544_08240 PF12795 Mechanosensitive ion channel porin domain E2544_08240 PF00924 Mechanosensitive ion channel E2544_08240 PF12794 Mechanosensitive ion channel inner membrane domain 1 E2544_08245 PF03466 LysR substrate binding domain E2544_08245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_08250 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain E2544_08250 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain E2544_08255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_08255 PF03466 LysR substrate binding domain E2544_08280 PF00596 Class II Aldolase and Adducin N-terminal domain E2544_08290 PF03466 LysR substrate binding domain E2544_08290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_08305 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain E2544_08305 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain E2544_08315 PF07690 Major Facilitator Superfamily E2544_08325 PF01425 Amidase E2544_08330 PF00583 Acetyltransferase (GNAT) family E2544_08345 PF00171 Aldehyde dehydrogenase family E2544_08360 PF13603 Leucyl-tRNA synthetase, Domain 2 E2544_08360 PF09334 tRNA synthetases class I (M) E2544_08360 PF00133 tRNA synthetases class I (I, L, M and V) E2544_08360 PF08264 Anticodon-binding domain of tRNA E2544_08365 PF07690 Major Facilitator Superfamily E2544_08370 PF01047 MarR family E2544_08380 PF00768 D-alanyl-D-alanine carboxypeptidase E2544_08380 PF07943 Penicillin-binding protein 5, C-terminal domain E2544_08395 PF00916 Sulfate permease family E2544_08395 PF01740 STAS domain E2544_08400 PF00005 ABC transporter E2544_08400 PF12399 Branched-chain amino acid ATP-binding cassette transporter E2544_08410 PF13458 Periplasmic binding protein E2544_08415 PF00471 Ribosomal protein L33 E2544_08420 PF00830 Ribosomal L28 family E2544_08425 PF07690 Major Facilitator Superfamily E2544_08440 PF00528 Binding-protein-dependent transport system inner membrane component E2544_08445 PF00571 CBS domain E2544_08445 PF00005 ABC transporter E2544_08450 PF01361 Tautomerase enzyme E2544_08455 PF03466 LysR substrate binding domain E2544_08455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_08460 PF00384 Molybdopterin oxidoreductase E2544_08465 PF01062 Bestrophin, RFP-TM, chloride channel E2544_08470 PF01389 OmpA-like transmembrane domain E2544_08470 PF00691 OmpA family E2544_08475 PF05662 Coiled stalk of trimeric autotransporter adhesin E2544_08475 PF13018 Extended Signal Peptide of Type V secretion system E2544_08475 PF05662 Coiled stalk of trimeric autotransporter adhesin E2544_08475 PF05658 Head domain of trimeric autotransporter adhesin E2544_08475 PF13018 Extended Signal Peptide of Type V secretion system E2544_08475 PF03895 YadA-like membrane anchor domain E2544_08475 PF03895 YadA-like membrane anchor domain E2544_08475 PF05658 Head domain of trimeric autotransporter adhesin E2544_08495 PF00072 Response regulator receiver domain E2544_08495 PF00512 His Kinase A (phospho-acceptor) domain E2544_08495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2544_08495 PF01627 Hpt domain E2544_08495 PF00989 PAS fold E2544_08495 PF00497 Bacterial extracellular solute-binding proteins, family 3 E2544_08505 PF00196 Bacterial regulatory proteins, luxR family E2544_08505 PF00072 Response regulator receiver domain E2544_08510 PF09456 RcsC Alpha-Beta-Loop (ABL) E2544_08510 PF00072 Response regulator receiver domain E2544_08510 PF00512 His Kinase A (phospho-acceptor) domain E2544_08510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2544_08515 PF00561 alpha/beta hydrolase fold E2544_08520 PF03401 Tripartite tricarboxylate transporter family receptor E2544_08530 PF00596 Class II Aldolase and Adducin N-terminal domain E2544_08535 PF08671 Anti-repressor SinI E2544_08535 PF01381 Helix-turn-helix E2544_08545 PF08543 Phosphomethylpyrimidine kinase E2544_08555 PF00171 Aldehyde dehydrogenase family E2544_08560 PF00005 ABC transporter E2544_08565 PF00497 Bacterial extracellular solute-binding proteins, family 3 E2544_08570 PF00528 Binding-protein-dependent transport system inner membrane component E2544_08575 PF00528 Binding-protein-dependent transport system inner membrane component E2544_08580 PF01266 FAD dependent oxidoreductase E2544_08645 PF00313 'Cold-shock' DNA-binding domain E2544_08775 PF02413 Caudovirales tail fibre assembly protein, lambda gpK E2544_08790 PF00574 Clp protease E2544_08835 PF06791 Prophage tail length tape measure protein E2544_08925 PF03401 Tripartite tricarboxylate transporter family receptor E2544_08950 PF01494 FAD binding domain E2544_08965 PF13439 Glycosyltransferase Family 4 E2544_08965 PF00534 Glycosyl transferases group 1 E2544_08995 PF00005 ABC transporter E2544_08995 PF00664 ABC transporter transmembrane region E2544_09005 PF00534 Glycosyl transferases group 1 E2544_09005 PF13439 Glycosyltransferase Family 4 E2544_09025 PF02543 Carbamoyltransferase N-terminus E2544_09025 PF16861 Carbamoyltransferase C-terminus E2544_09030 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 E2544_09030 PF00535 Glycosyl transferase family 2 E2544_09045 PF16363 GDP-mannose 4,6 dehydratase E2544_09080 PF00115 Cytochrome C and Quinol oxidase polypeptide I E2544_09100 PF00342 Phosphoglucose isomerase E2544_09105 PF00483 Nucleotidyl transferase E2544_09110 PF00924 Mechanosensitive ion channel E2544_09130 PF02464 Competence-damaged protein E2544_09130 PF18146 Damage-inducible protein CinA KH domain E2544_09130 PF00994 Probable molybdopterin binding domain E2544_09145 PF03401 Tripartite tricarboxylate transporter family receptor E2544_09150 PF03401 Tripartite tricarboxylate transporter family receptor E2544_09155 PF01244 Membrane dipeptidase (Peptidase family M19) E2544_09160 PF01266 FAD dependent oxidoreductase E2544_09170 PF01266 FAD dependent oxidoreductase E2544_09175 PF04324 BFD-like [2Fe-2S] binding domain E2544_09175 PF07992 Pyridine nucleotide-disulphide oxidoreductase E2544_09185 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain E2544_09185 PF00205 Thiamine pyrophosphate enzyme, central domain E2544_09185 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E2544_09195 PF05378 Hydantoinase/oxoprolinase N-terminal region E2544_09195 PF01968 Hydantoinase/oxoprolinase E2544_09200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_09200 PF03466 LysR substrate binding domain E2544_09205 PF03401 Tripartite tricarboxylate transporter family receptor E2544_09215 PF00672 HAMP domain E2544_09215 PF00512 His Kinase A (phospho-acceptor) domain E2544_09215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2544_09220 PF00072 Response regulator receiver domain E2544_09220 PF00486 Transcriptional regulatory protein, C terminal E2544_09230 PF02321 Outer membrane efflux protein E2544_09235 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E2544_09235 PF00529 HlyD membrane-fusion protein of T1SS E2544_09240 PF00873 AcrB/AcrD/AcrF family E2544_09250 PF03401 Tripartite tricarboxylate transporter family receptor E2544_09255 PF07729 FCD domain E2544_09255 PF00392 Bacterial regulatory proteins, gntR family E2544_09285 PF13396 Phospholipase_D-nuclease N-terminal E2544_09285 PF13091 PLD-like domain E2544_09300 PF00155 Aminotransferase class I and II E2544_09300 PF00392 Bacterial regulatory proteins, gntR family E2544_09310 PF00111 2Fe-2S iron-sulfur cluster binding domain E2544_09315 PF00376 MerR family regulatory protein E2544_09315 PF09278 MerR, DNA binding E2544_09320 PF09828 Chromate resistance exported protein E2544_09325 PF02417 Chromate transporter E2544_09330 PF09828 Chromate resistance exported protein E2544_09340 PF00512 His Kinase A (phospho-acceptor) domain E2544_09340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2544_09340 PF00672 HAMP domain E2544_09345 PF00072 Response regulator receiver domain E2544_09345 PF02954 Bacterial regulatory protein, Fis family E2544_09345 PF00158 Sigma-54 interaction domain E2544_09350 PF13426 PAS domain E2544_09350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2544_09350 PF00072 Response regulator receiver domain E2544_09365 PF00149 Calcineurin-like phosphoesterase E2544_09375 PF03401 Tripartite tricarboxylate transporter family receptor E2544_09380 PF02515 CoA-transferase family III E2544_09385 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component E2544_09395 PF03480 Bacterial extracellular solute-binding protein, family 7 E2544_09405 PF00682 HMGL-like E2544_09430 PF04299 Putative FMN-binding domain E2544_09460 PF04228 Putative neutral zinc metallopeptidase E2544_09465 PF01300 Telomere recombination E2544_09470 PF02163 Peptidase family M50 E2544_09475 PF00701 Dihydrodipicolinate synthetase family E2544_09480 PF06804 NlpB/DapX lipoprotein E2544_09490 PF08007 Cupin superfamily protein E2544_09495 PF01624 MutS domain I E2544_09495 PF05192 MutS domain III E2544_09495 PF05188 MutS domain II E2544_09495 PF05190 MutS family domain IV E2544_09495 PF00488 MutS domain V E2544_09500 PF03401 Tripartite tricarboxylate transporter family receptor E2544_09515 PF03466 LysR substrate binding domain E2544_09515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_09535 PF08240 Alcohol dehydrogenase GroES-like domain E2544_09535 PF00107 Zinc-binding dehydrogenase E2544_09540 PF00106 short chain dehydrogenase E2544_09545 PF03466 LysR substrate binding domain E2544_09545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_09555 PF07311 Dodecin E2544_09560 PF03358 NADPH-dependent FMN reductase E2544_09575 PF00392 Bacterial regulatory proteins, gntR family E2544_09575 PF07729 FCD domain E2544_09580 PF01425 Amidase E2544_09590 PF00005 ABC transporter E2544_09595 PF00528 Binding-protein-dependent transport system inner membrane component E2544_09600 PF09084 NMT1/THI5 like E2544_09615 PF00083 Sugar (and other) transporter E2544_09620 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E2544_09620 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E2544_09625 PF03401 Tripartite tricarboxylate transporter family receptor E2544_09630 PF00596 Class II Aldolase and Adducin N-terminal domain E2544_09635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_09635 PF03466 LysR substrate binding domain E2544_09660 PF00924 Mechanosensitive ion channel E2544_09660 PF05552 Conserved TM helix E2544_09670 PF03401 Tripartite tricarboxylate transporter family receptor E2544_09675 PF00588 SpoU rRNA Methylase family E2544_09680 PF00459 Inositol monophosphatase family E2544_09685 PF00127 Copper binding proteins, plastocyanin/azurin family E2544_09690 PF03741 Integral membrane protein TerC family E2544_09690 PF03471 Transporter associated domain E2544_09695 PF02673 Bacitracin resistance protein BacA E2544_09700 PF00149 Calcineurin-like phosphoesterase E2544_09705 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD E2544_09715 PF01406 tRNA synthetases class I (C) catalytic domain E2544_09715 PF09190 DALR domain E2544_09725 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit E2544_09730 PF01171 PP-loop family E2544_09730 PF09179 TilS substrate binding domain E2544_09735 PF00696 Amino acid kinase family E2544_09735 PF13840 ACT domain E2544_09735 PF01842 ACT domain E2544_09745 PF00581 Rhodanese-like domain E2544_09750 PF03401 Tripartite tricarboxylate transporter family receptor E2544_09760 PF09339 IclR helix-turn-helix domain E2544_09760 PF01614 Bacterial transcriptional regulator E2544_09815 PF02146 Sir2 family E2544_09820 PF05995 Cysteine dioxygenase type I E2544_09825 PF01614 Bacterial transcriptional regulator E2544_09825 PF09339 IclR helix-turn-helix domain E2544_09835 PF03401 Tripartite tricarboxylate transporter family receptor E2544_09840 PF02515 CoA-transferase family III E2544_09845 PF00378 Enoyl-CoA hydratase/isomerase E2544_09850 PF01144 Coenzyme A transferase E2544_09855 PF01144 Coenzyme A transferase E2544_09860 PF00501 AMP-binding enzyme E2544_09860 PF13193 AMP-binding enzyme C-terminal domain E2544_09865 PF03401 Tripartite tricarboxylate transporter family receptor E2544_09870 PF01557 Fumarylacetoacetate (FAA) hydrolase family E2544_09875 PF00392 Bacterial regulatory proteins, gntR family E2544_09875 PF07729 FCD domain E2544_09885 PF04166 Pyridoxal phosphate biosynthetic protein PdxA E2544_09890 PF07005 Sugar-binding N-terminal domain E2544_09890 PF17042 Nucleotide-binding C-terminal domain E2544_09895 PF03812 2-keto-3-deoxygluconate permease E2544_09900 PF07715 TonB-dependent Receptor Plug Domain E2544_09900 PF00593 TonB dependent receptor E2544_09910 PF03401 Tripartite tricarboxylate transporter family receptor E2544_09915 PF00884 Sulfatase E2544_09915 PF16347 Domain of unknown function (DUF4976) E2544_09920 PF13193 AMP-binding enzyme C-terminal domain E2544_09920 PF00501 AMP-binding enzyme E2544_09935 PF00108 Thiolase, N-terminal domain E2544_09935 PF02803 Thiolase, C-terminal domain E2544_09940 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain E2544_09940 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain E2544_09940 PF00378 Enoyl-CoA hydratase/isomerase E2544_09950 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain E2544_09950 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain E2544_09950 PF00378 Enoyl-CoA hydratase/isomerase E2544_09955 PF00108 Thiolase, N-terminal domain E2544_09955 PF02803 Thiolase, C-terminal domain E2544_09960 PF09317 Domain of unknown function (DUF1974) E2544_09960 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E2544_09960 PF02770 Acyl-CoA dehydrogenase, middle domain E2544_09960 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E2544_09965 PF00440 Bacterial regulatory proteins, tetR family E2544_09965 PF08361 MAATS-type transcriptional repressor, C-terminal region E2544_09975 PF00072 Response regulator receiver domain E2544_09975 PF00196 Bacterial regulatory proteins, luxR family E2544_09980 PF00072 Response regulator receiver domain E2544_09980 PF00196 Bacterial regulatory proteins, luxR family E2544_09985 PF13579 Glycosyl transferase 4-like domain E2544_09985 PF00534 Glycosyl transferases group 1 E2544_09990 PF00132 Bacterial transferase hexapeptide (six repeats) E2544_10000 PF13439 Glycosyltransferase Family 4 E2544_10000 PF00534 Glycosyl transferases group 1 E2544_10010 PF00535 Glycosyl transferase family 2 E2544_10020 PF01370 NAD dependent epimerase/dehydratase family E2544_10025 PF16363 GDP-mannose 4,6 dehydratase E2544_10035 PF00483 Nucleotidyl transferase E2544_10035 PF01050 Mannose-6-phosphate isomerase E2544_10040 PF00293 NUDIX domain E2544_10045 PF02397 Bacterial sugar transferase E2544_10050 PF10531 SLBB domain E2544_10050 PF02563 Polysaccharide biosynthesis/export protein E2544_10055 PF13614 AAA domain E2544_10055 PF02706 Chain length determinant protein E2544_10055 PF13807 G-rich domain on putative tyrosine kinase E2544_10060 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I E2544_10060 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II E2544_10060 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III E2544_10060 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain E2544_10065 PF00342 Phosphoglucose isomerase E2544_10070 PF16363 GDP-mannose 4,6 dehydratase E2544_10075 PF00132 Bacterial transferase hexapeptide (six repeats) E2544_10080 PF02146 Sir2 family E2544_10085 PF00459 Inositol monophosphatase family E2544_10090 PF00171 Aldehyde dehydrogenase family E2544_10095 PF00202 Aminotransferase class-III E2544_10100 PF00392 Bacterial regulatory proteins, gntR family E2544_10100 PF00155 Aminotransferase class I and II E2544_10110 PF00580 UvrD/REP helicase N-terminal domain E2544_10110 PF13361 UvrD-like helicase C-terminal domain E2544_10115 PF01544 CorA-like Mg2+ transporter protein E2544_10120 PF00565 Staphylococcal nuclease homologue E2544_10130 PF00528 Binding-protein-dependent transport system inner membrane component E2544_10135 PF00528 Binding-protein-dependent transport system inner membrane component E2544_10135 PF12911 N-terminal TM domain of oligopeptide transport permease C E2544_10140 PF00005 ABC transporter E2544_10140 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E2544_10145 PF01047 MarR family E2544_10155 PF08479 POTRA domain, ShlB-type E2544_10155 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB E2544_10160 PF03707 Bacterial signalling protein N terminal repeat E2544_10160 PF00990 Diguanylate cyclase, GGDEF domain E2544_10160 PF00563 EAL domain E2544_10190 PF13629 Pilus formation protein N terminal region E2544_10190 PF00263 Bacterial type II and III secretion system protein E2544_10190 PF04972 BON domain E2544_10200 PF00437 Type II/IV secretion system protein E2544_10230 PF00072 Response regulator receiver domain E2544_10230 PF00158 Sigma-54 interaction domain E2544_10230 PF02954 Bacterial regulatory protein, Fis family E2544_10250 PF08207 Elongation factor P (EF-P) KOW-like domain E2544_10250 PF01132 Elongation factor P (EF-P) OB domain E2544_10250 PF09285 Elongation factor P, C-terminal E2544_10265 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase E2544_10270 PF00330 Aconitase family (aconitate hydratase) E2544_10270 PF00694 Aconitase C-terminal domain E2544_10275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_10275 PF03466 LysR substrate binding domain E2544_10285 PF00501 AMP-binding enzyme E2544_10285 PF13193 AMP-binding enzyme C-terminal domain E2544_10290 PF03401 Tripartite tricarboxylate transporter family receptor E2544_10295 PF07729 FCD domain E2544_10295 PF00392 Bacterial regulatory proteins, gntR family E2544_10305 PF02653 Branched-chain amino acid transport system / permease component E2544_10310 PF11862 Domain of unknown function (DUF3382) E2544_10310 PF02653 Branched-chain amino acid transport system / permease component E2544_10315 PF12399 Branched-chain amino acid ATP-binding cassette transporter E2544_10315 PF00005 ABC transporter E2544_10320 PF00005 ABC transporter E2544_10325 PF07687 Peptidase dimerisation domain E2544_10325 PF01546 Peptidase family M20/M25/M40 E2544_10330 PF07171 MlrC C-terminus E2544_10330 PF07364 Metallopeptidase family M81 E2544_10335 PF07715 TonB-dependent Receptor Plug Domain E2544_10335 PF00593 TonB dependent receptor E2544_10345 PF06434 Aconitate hydratase 2 N-terminus E2544_10345 PF11791 Aconitate B N-terminal domain E2544_10345 PF00330 Aconitase family (aconitate hydratase) E2544_10365 PF00478 IMP dehydrogenase / GMP reductase domain E2544_10365 PF00571 CBS domain E2544_10370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_10370 PF03466 LysR substrate binding domain E2544_10375 PF02515 CoA-transferase family III E2544_10385 PF02770 Acyl-CoA dehydrogenase, middle domain E2544_10385 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E2544_10385 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E2544_10390 PF03401 Tripartite tricarboxylate transporter family receptor E2544_10395 PF00378 Enoyl-CoA hydratase/isomerase E2544_10400 PF02803 Thiolase, C-terminal domain E2544_10400 PF00108 Thiolase, N-terminal domain E2544_10415 PF00583 Acetyltransferase (GNAT) family E2544_10415 PF13607 Succinyl-CoA ligase like flavodoxin domain E2544_10415 PF13380 CoA binding domain E2544_10420 PF03401 Tripartite tricarboxylate transporter family receptor E2544_10425 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E2544_10425 PF02770 Acyl-CoA dehydrogenase, middle domain E2544_10425 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E2544_10440 PF00392 Bacterial regulatory proteins, gntR family E2544_10440 PF07729 FCD domain E2544_10450 PF00378 Enoyl-CoA hydratase/isomerase E2544_10455 PF13193 AMP-binding enzyme C-terminal domain E2544_10455 PF00501 AMP-binding enzyme E2544_10460 PF03401 Tripartite tricarboxylate transporter family receptor E2544_10465 PF00248 Aldo/keto reductase family E2544_10475 PF02653 Branched-chain amino acid transport system / permease component E2544_10480 PF00005 ABC transporter E2544_10485 PF01266 FAD dependent oxidoreductase E2544_10490 PF01266 FAD dependent oxidoreductase E2544_10515 PF02675 S-adenosylmethionine decarboxylase E2544_10525 PF00528 Binding-protein-dependent transport system inner membrane component E2544_10530 PF03459 TOBE domain E2544_10530 PF00005 ABC transporter E2544_10535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_10535 PF03459 TOBE domain E2544_10555 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E2544_10555 PF00529 HlyD membrane-fusion protein of T1SS E2544_10560 PF00873 AcrB/AcrD/AcrF family E2544_10565 PF02321 Outer membrane efflux protein E2544_10570 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ E2544_10575 PF01648 4'-phosphopantetheinyl transferase superfamily E2544_10580 PF00933 Glycosyl hydrolase family 3 N terminal domain E2544_10585 PF08459 UvrC Helix-hairpin-helix N-terminal E2544_10585 PF01541 GIY-YIG catalytic domain E2544_10585 PF02151 UvrB/uvrC motif E2544_10590 PF01066 CDP-alcohol phosphatidyltransferase E2544_10600 PF03150 Di-haem cytochrome c peroxidase E2544_10600 PF00034 Cytochrome c E2544_10605 PF14489 QueF-like protein E2544_10605 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term E2544_10610 PF00463 Isocitrate lyase family E2544_10615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_10615 PF03466 LysR substrate binding domain E2544_10625 PF03328 HpcH/HpaI aldolase/citrate lyase family E2544_10630 PF02515 CoA-transferase family III E2544_10645 PF13649 Methyltransferase domain E2544_10655 PF00155 Aminotransferase class I and II E2544_10660 PF00202 Aminotransferase class-III E2544_10675 PF00115 Cytochrome C and Quinol oxidase polypeptide I E2544_10690 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP E2544_10690 PF13442 Cytochrome C oxidase, cbb3-type, subunit III E2544_10695 PF12801 4Fe-4S binding domain E2544_10695 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase E2544_10695 PF13746 4Fe-4S dicluster domain E2544_10710 PF08274 PhnA Zinc-Ribbon E2544_10710 PF03831 PhnA domain E2544_10715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_10715 PF03466 LysR substrate binding domain E2544_10720 PF03401 Tripartite tricarboxylate transporter family receptor E2544_10725 PF04166 Pyridoxal phosphate biosynthetic protein PdxA E2544_10730 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain E2544_10730 PF13378 Enolase C-terminal domain-like E2544_10735 PF00701 Dihydrodipicolinate synthetase family E2544_10740 PF00005 ABC transporter E2544_10745 PF01061 ABC-2 type transporter E2544_10750 PF13417 Glutathione S-transferase, N-terminal domain E2544_10760 PF09278 MerR, DNA binding E2544_10760 PF00376 MerR family regulatory protein E2544_10780 PF01494 FAD binding domain E2544_10785 PF03006 Haemolysin-III related E2544_10790 PF10503 Esterase PHB depolymerase E2544_10800 PF18029 Glyoxalase-like domain E2544_10810 PF02805 Metal binding domain of Ada E2544_10810 PF12833 Helix-turn-helix domain E2544_10835 PF02668 Taurine catabolism dioxygenase TauD, TfdA family E2544_10840 PF03401 Tripartite tricarboxylate transporter family receptor E2544_10850 PF01042 Endoribonuclease L-PSP E2544_10855 PF03466 LysR substrate binding domain E2544_10855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_10880 PF03976 Polyphosphate kinase 2 (PPK2) E2544_10885 PF02321 Outer membrane efflux protein E2544_10890 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E2544_10890 PF00529 HlyD membrane-fusion protein of T1SS E2544_10905 PF02567 Phenazine biosynthesis-like protein E2544_10910 PF02445 Quinolinate synthetase A protein E2544_10915 PF00890 FAD binding domain E2544_10915 PF02910 Fumarate reductase flavoprotein C-term E2544_10920 PF12833 Helix-turn-helix domain E2544_10925 PF12697 Alpha/beta hydrolase family E2544_10930 PF01979 Amidohydrolase family E2544_10935 PF01266 FAD dependent oxidoreductase E2544_10940 PF00144 Beta-lactamase E2544_10945 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain E2544_10945 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain E2544_10960 PF07690 Major Facilitator Superfamily E2544_10975 PF03180 NLPA lipoprotein E2544_10980 PF09383 NIL domain E2544_10980 PF00005 ABC transporter E2544_10985 PF00528 Binding-protein-dependent transport system inner membrane component E2544_10990 PF01053 Cys/Met metabolism PLP-dependent enzyme E2544_11000 PF03976 Polyphosphate kinase 2 (PPK2) E2544_11010 PF01253 Translation initiation factor SUI1 E2544_11015 PF01479 S4 domain E2544_11020 PF03401 Tripartite tricarboxylate transporter family receptor E2544_11025 PF04909 Amidohydrolase E2544_11035 PF00005 ABC transporter E2544_11035 PF06472 ABC transporter transmembrane region 2 E2544_11040 PF01958 Domain of unknown function DUF108 E2544_11040 PF03447 Homoserine dehydrogenase, NAD binding domain E2544_11055 PF03401 Tripartite tricarboxylate transporter family receptor E2544_11065 PF07690 Major Facilitator Superfamily E2544_11070 PF00440 Bacterial regulatory proteins, tetR family E2544_11075 PF03401 Tripartite tricarboxylate transporter family receptor E2544_11080 PF00135 Carboxylesterase family E2544_11085 PF00962 Adenosine/AMP deaminase E2544_11090 PF03466 LysR substrate binding domain E2544_11090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_11100 PF01554 MatE E2544_11105 PF13406 Transglycosylase SLT domain E2544_11125 PF00958 GMP synthase C terminal domain E2544_11125 PF00117 Glutamine amidotransferase class-I E2544_11125 PF03352 Methyladenine glycosylase E2544_11125 PF13302 Acetyltransferase (GNAT) domain E2544_11125 PF13673 Acetyltransferase (GNAT) domain E2544_11135 PF00528 Binding-protein-dependent transport system inner membrane component E2544_11135 PF12911 N-terminal TM domain of oligopeptide transport permease C E2544_11140 PF00528 Binding-protein-dependent transport system inner membrane component E2544_11145 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E2544_11150 PF00005 ABC transporter E2544_11150 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E2544_11160 PF08479 POTRA domain, ShlB-type E2544_11160 PF17287 POTRA domain E2544_11160 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB E2544_11165 PF05860 haemagglutination activity domain E2544_11165 PF13332 Hemagglutinin repeat E2544_11165 PF04829 Pre-toxin domain with VENN motif E2544_11175 PF13332 Hemagglutinin repeat E2544_11175 PF05860 haemagglutination activity domain E2544_11175 PF04829 Pre-toxin domain with VENN motif E2544_11190 PF01037 Lrp/AsnC ligand binding domain E2544_11190 PF13404 AsnC-type helix-turn-helix domain E2544_11210 PF03069 Acetamidase/Formamidase family E2544_11235 PF00043 Glutathione S-transferase, C-terminal domain E2544_11235 PF13417 Glutathione S-transferase, N-terminal domain E2544_11240 PF02627 Carboxymuconolactone decarboxylase family E2544_11245 PF08281 Sigma-70, region 4 E2544_11245 PF12680 SnoaL-like domain E2544_11245 PF04542 Sigma-70 region 2 E2544_11260 PF12843 Putative quorum-sensing-regulated virulence factor E2544_11270 PF12833 Helix-turn-helix domain E2544_11275 PF00593 TonB dependent receptor E2544_11275 PF07715 TonB-dependent Receptor Plug Domain E2544_11290 PF00012 Hsp70 protein E2544_11295 PF00293 NUDIX domain E2544_11325 PF00083 Sugar (and other) transporter E2544_11335 PF00027 Cyclic nucleotide-binding domain E2544_11335 PF13545 Crp-like helix-turn-helix domain E2544_11345 PF10431 C-terminal, D2-small domain, of ClpB protein E2544_11345 PF17871 AAA lid domain E2544_11345 PF00004 ATPase family associated with various cellular activities (AAA) E2544_11345 PF07724 AAA domain (Cdc48 subfamily) E2544_11345 PF02861 Clp amino terminal domain, pathogenicity island component E2544_11355 PF07992 Pyridine nucleotide-disulphide oxidoreductase E2544_11365 PF00775 Dioxygenase E2544_11365 PF04444 Catechol dioxygenase N terminus E2544_11370 PF00171 Aldehyde dehydrogenase family E2544_11385 PF03401 Tripartite tricarboxylate transporter family receptor E2544_11390 PF00884 Sulfatase E2544_11390 PF16347 Domain of unknown function (DUF4976) E2544_11405 PF03401 Tripartite tricarboxylate transporter family receptor E2544_11410 PF03737 Aldolase/RraA E2544_11415 PF01842 ACT domain E2544_11415 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E2544_11415 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E2544_11420 PF00392 Bacterial regulatory proteins, gntR family E2544_11420 PF07729 FCD domain E2544_11435 PF09370 Phosphoenolpyruvate hydrolase-like E2544_11445 PF03466 LysR substrate binding domain E2544_11445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_11450 PF07969 Amidohydrolase family E2544_11460 PF00175 Oxidoreductase NAD-binding domain E2544_11460 PF00667 FAD binding domain E2544_11460 PF00258 Flavodoxin E2544_11465 PF02424 ApbE family E2544_11490 PF02537 CrcB-like protein, Camphor Resistance (CrcB) E2544_11510 PF00842 Alanine racemase, C-terminal domain E2544_11510 PF01168 Alanine racemase, N-terminal domain E2544_11520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_11520 PF03466 LysR substrate binding domain E2544_11525 PF00753 Metallo-beta-lactamase superfamily E2544_11525 PF12706 Beta-lactamase superfamily domain E2544_11530 PF03401 Tripartite tricarboxylate transporter family receptor E2544_11535 PF12697 Alpha/beta hydrolase family E2544_11540 PF03328 HpcH/HpaI aldolase/citrate lyase family E2544_11545 PF01557 Fumarylacetoacetate (FAA) hydrolase family E2544_11550 PF01557 Fumarylacetoacetate (FAA) hydrolase family E2544_11555 PF01557 Fumarylacetoacetate (FAA) hydrolase family E2544_11560 PF00171 Aldehyde dehydrogenase family E2544_11565 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase E2544_11580 PF18073 Rubredoxin metal binding domain E2544_11595 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E2544_11595 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E2544_11600 PF03401 Tripartite tricarboxylate transporter family receptor E2544_11605 PF03401 Tripartite tricarboxylate transporter family receptor E2544_11615 PF00392 Bacterial regulatory proteins, gntR family E2544_11615 PF07729 FCD domain E2544_11625 PF00920 Dehydratase family E2544_11630 PF03401 Tripartite tricarboxylate transporter family receptor E2544_11635 PF03328 HpcH/HpaI aldolase/citrate lyase family E2544_11640 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain E2544_11640 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain E2544_11645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_11645 PF03466 LysR substrate binding domain E2544_11650 PF01649 Ribosomal protein S20 E2544_11660 PF03023 Lipid II flippase MurJ E2544_11665 PF00106 short chain dehydrogenase E2544_11670 PF05191 Adenylate kinase, active site lid E2544_11675 PF02348 Cytidylyltransferase E2544_11680 PF03966 Trm112p-like protein E2544_11685 PF02606 Tetraacyldisaccharide-1-P 4'-kinase E2544_11695 PF01618 MotA/TolQ/ExbB proton channel family E2544_11700 PF13742 OB-fold nucleic acid binding domain E2544_11700 PF02601 Exonuclease VII, large subunit E2544_11705 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain E2544_11705 PF02777 Iron/manganese superoxide dismutases, C-terminal domain E2544_11710 PF02203 Tar ligand binding domain homologue E2544_11710 PF00672 HAMP domain E2544_11710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E2544_11715 PF00654 Voltage gated chloride channel E2544_11720 PF00108 Thiolase, N-terminal domain E2544_11720 PF02803 Thiolase, C-terminal domain E2544_11730 PF00313 'Cold-shock' DNA-binding domain E2544_11735 PF02617 ATP-dependent Clp protease adaptor protein ClpS E2544_11740 PF17962 Bacterial macroglobulin domain 6 E2544_11740 PF07703 Alpha-2-macroglobulin bait region domain E2544_11740 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain E2544_11740 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain E2544_11740 PF00207 Alpha-2-macroglobulin family E2544_11740 PF11974 Bacterial alpha-2-macroglobulin MG3 domain E2544_11740 PF01835 MG2 domain E2544_11740 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain E2544_11745 PF00905 Penicillin binding protein transpeptidase domain E2544_11745 PF06832 Penicillin-Binding Protein C-terminus Family E2544_11745 PF00912 Transglycosylase E2544_11750 PF00004 ATPase family associated with various cellular activities (AAA) E2544_11750 PF17871 AAA lid domain E2544_11750 PF02861 Clp amino terminal domain, pathogenicity island component E2544_11750 PF10431 C-terminal, D2-small domain, of ClpB protein E2544_11750 PF07724 AAA domain (Cdc48 subfamily) E2544_11755 PF04403 Paraquat-inducible protein A E2544_11760 PF02470 MlaD protein E2544_11770 PF00171 Aldehyde dehydrogenase family E2544_11770 PF01619 Proline dehydrogenase E2544_11770 PF14850 DNA-binding domain of Proline dehydrogenase E2544_11770 PF18327 Proline utilization A proline dehydrogenase N-terminal domain E2544_11775 PF13458 Periplasmic binding protein E2544_11780 PF02653 Branched-chain amino acid transport system / permease component E2544_11785 PF11862 Domain of unknown function (DUF3382) E2544_11785 PF02653 Branched-chain amino acid transport system / permease component E2544_11790 PF00005 ABC transporter E2544_11790 PF12399 Branched-chain amino acid ATP-binding cassette transporter E2544_11795 PF00005 ABC transporter E2544_11800 PF02515 CoA-transferase family III E2544_11805 PF00378 Enoyl-CoA hydratase/isomerase E2544_11810 PF03401 Tripartite tricarboxylate transporter family receptor E2544_11815 PF00392 Bacterial regulatory proteins, gntR family E2544_11815 PF07729 FCD domain E2544_11820 PF07690 Major Facilitator Superfamily E2544_11840 PF01566 Natural resistance-associated macrophage protein E2544_11845 PF02566 OsmC-like protein E2544_11855 PF00497 Bacterial extracellular solute-binding proteins, family 3 E2544_11860 PF00528 Binding-protein-dependent transport system inner membrane component E2544_11865 PF00528 Binding-protein-dependent transport system inner membrane component E2544_11870 PF00005 ABC transporter E2544_11875 PF00724 NADH:flavin oxidoreductase / NADH oxidase family E2544_11880 PF00465 Iron-containing alcohol dehydrogenase E2544_11885 PF03401 Tripartite tricarboxylate transporter family receptor E2544_11890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_11890 PF03466 LysR substrate binding domain E2544_11895 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA E2544_11905 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA E2544_11930 PF01425 Amidase E2544_11940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_11940 PF03466 LysR substrate binding domain E2544_11950 PF03575 Peptidase family S51 E2544_11965 PF03401 Tripartite tricarboxylate transporter family receptor E2544_11970 PF01545 Cation efflux family E2544_11975 PF04127 DNA / pantothenate metabolism flavoprotein E2544_11975 PF02441 Flavoprotein E2544_11980 PF01252 Signal peptidase (SPase) II E2544_11985 PF08264 Anticodon-binding domain of tRNA E2544_11985 PF06827 Zinc finger found in FPG and IleRS E2544_11985 PF00133 tRNA synthetases class I (I, L, M and V) E2544_11990 PF01687 Riboflavin kinase E2544_11990 PF06574 FAD synthetase E2544_11995 PF00551 Formyl transferase E2544_12000 PF01189 16S rRNA methyltransferase RsmB/F E2544_12000 PF01029 NusB family E2544_12010 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 E2544_12010 PF13542 Helix-turn-helix domain of transposase family ISL3 E2544_12010 PF01610 Transposase E2544_12015 PF13361 UvrD-like helicase C-terminal domain E2544_12015 PF00580 UvrD/REP helicase N-terminal domain E2544_12025 PF03150 Di-haem cytochrome c peroxidase E2544_12045 PF12848 ABC transporter E2544_12045 PF00005 ABC transporter E2544_12050 PF05175 Methyltransferase small domain E2544_12055 PF01546 Peptidase family M20/M25/M40 E2544_12055 PF07687 Peptidase dimerisation domain E2544_12060 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal E2544_12060 PF14602 Hexapeptide repeat of succinyl-transferase E2544_12060 PF00132 Bacterial transferase hexapeptide (six repeats) E2544_12065 PF00155 Aminotransferase class I and II E2544_12090 PF00230 Major intrinsic protein E2544_12095 PF02308 MgtC family E2544_12100 PF01292 Prokaryotic cytochrome b561 E2544_12105 PF00793 DAHP synthetase I family E2544_12120 PF02470 MlaD protein E2544_12130 PF07690 Major Facilitator Superfamily E2544_12135 PF00440 Bacterial regulatory proteins, tetR family E2544_12150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_12150 PF03466 LysR substrate binding domain E2544_12155 PF01168 Alanine racemase, N-terminal domain E2544_12155 PF14031 Putative serine dehydratase domain E2544_12160 PF01042 Endoribonuclease L-PSP E2544_12185 PF00313 'Cold-shock' DNA-binding domain E2544_12195 PF00313 'Cold-shock' DNA-binding domain E2544_12200 PF03350 Uncharacterized protein family, UPF0114 E2544_12205 PF01435 Peptidase family M48 E2544_12210 PF05697 Bacterial trigger factor protein (TF) E2544_12210 PF05698 Bacterial trigger factor protein (TF) C-terminus E2544_12210 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E2544_12215 PF00574 Clp protease E2544_12220 PF06689 ClpX C4-type zinc finger E2544_12220 PF10431 C-terminal, D2-small domain, of ClpB protein E2544_12220 PF07724 AAA domain (Cdc48 subfamily) E2544_12225 PF02190 ATP-dependent protease La (LON) substrate-binding domain E2544_12225 PF05362 Lon protease (S16) C-terminal proteolytic domain E2544_12225 PF00004 ATPase family associated with various cellular activities (AAA) E2544_12230 PF00717 Peptidase S24-like E2544_12230 PF01726 LexA DNA binding domain E2544_12235 PF03401 Tripartite tricarboxylate transporter family receptor E2544_12240 PF13193 AMP-binding enzyme C-terminal domain E2544_12240 PF00501 AMP-binding enzyme E2544_12255 PF00155 Aminotransferase class I and II E2544_12260 PF00271 Helicase conserved C-terminal domain E2544_12260 PF02151 UvrB/uvrC motif E2544_12260 PF12344 Ultra-violet resistance protein B E2544_12260 PF17757 UvrB interaction domain E2544_12260 PF04851 Type III restriction enzyme, res subunit E2544_12265 PF01451 Low molecular weight phosphotyrosine protein phosphatase E2544_12270 PF02082 Transcriptional regulator E2544_12275 PF00266 Aminotransferase class-V E2544_12280 PF01592 NifU-like N terminal domain E2544_12285 PF01521 Iron-sulphur cluster biosynthesis E2544_12290 PF07743 HSCB C-terminal oligomerisation domain E2544_12295 PF00012 Hsp70 protein E2544_12300 PF00111 2Fe-2S iron-sulfur cluster binding domain E2544_12305 PF04384 Iron-sulphur cluster assembly E2544_12310 PF02142 MGS-like domain E2544_12315 PF03466 LysR substrate binding domain E2544_12315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_12320 PF03401 Tripartite tricarboxylate transporter family receptor E2544_12325 PF02515 CoA-transferase family III E2544_12330 PF00378 Enoyl-CoA hydratase/isomerase E2544_12335 PF00378 Enoyl-CoA hydratase/isomerase E2544_12340 PF12399 Branched-chain amino acid ATP-binding cassette transporter E2544_12340 PF00005 ABC transporter E2544_12360 PF00005 ABC transporter E2544_12365 PF00501 AMP-binding enzyme E2544_12370 PF00108 Thiolase, N-terminal domain E2544_12370 PF02803 Thiolase, C-terminal domain E2544_12375 PF00440 Bacterial regulatory proteins, tetR family E2544_12375 PF17932 Tetracyclin repressor-like, C-terminal domain E2544_12385 PF00152 tRNA synthetases class II (D, K and N) E2544_12385 PF01336 OB-fold nucleic acid binding domain E2544_12390 PF00106 short chain dehydrogenase E2544_12400 PF07690 Major Facilitator Superfamily E2544_12405 PF17768 RecJ OB domain E2544_12405 PF02272 DHHA1 domain E2544_12405 PF01368 DHH family E2544_12415 PF02687 FtsX-like permease family E2544_12415 PF12704 MacB-like periplasmic core domain E2544_12420 PF00005 ABC transporter E2544_12425 PF01026 TatD related DNase E2544_12430 PF16750 Sensor domain of 2-component histidine kinase E2544_12430 PF00672 HAMP domain E2544_12430 PF00512 His Kinase A (phospho-acceptor) domain E2544_12430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2544_12435 PF00072 Response regulator receiver domain E2544_12435 PF00486 Transcriptional regulatory protein, C terminal E2544_12440 PF07715 TonB-dependent Receptor Plug Domain E2544_12440 PF00593 TonB dependent receptor E2544_12445 PF01497 Periplasmic binding protein E2544_12450 PF01032 FecCD transport family E2544_12455 PF01032 FecCD transport family E2544_12460 PF00005 ABC transporter E2544_12465 PF02110 Hydroxyethylthiazole kinase family E2544_12475 PF01557 Fumarylacetoacetate (FAA) hydrolase family E2544_12480 PF02423 Ornithine cyclodeaminase/mu-crystallin family E2544_12490 PF00866 Ring hydroxylating beta subunit E2544_12495 PF00355 Rieske [2Fe-2S] domain E2544_12495 PF00848 Ring hydroxylating alpha subunit (catalytic domain) E2544_12500 PF00355 Rieske [2Fe-2S] domain E2544_12505 PF07992 Pyridine nucleotide-disulphide oxidoreductase E2544_12505 PF14759 Reductase C-terminal E2544_12515 PF03401 Tripartite tricarboxylate transporter family receptor E2544_12520 PF00005 ABC transporter E2544_12525 PF00528 Binding-protein-dependent transport system inner membrane component E2544_12530 PF00528 Binding-protein-dependent transport system inner membrane component E2544_12550 PF03772 Competence protein E2544_12550 PF00753 Metallo-beta-lactamase superfamily E2544_12560 PF17042 Nucleotide-binding C-terminal domain E2544_12560 PF07005 Sugar-binding N-terminal domain E2544_12565 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain E2544_12565 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain E2544_12575 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component E2544_12580 PF03480 Bacterial extracellular solute-binding protein, family 7 E2544_12595 PF00497 Bacterial extracellular solute-binding proteins, family 3 E2544_12600 PF00528 Binding-protein-dependent transport system inner membrane component E2544_12605 PF00528 Binding-protein-dependent transport system inner membrane component E2544_12610 PF00005 ABC transporter E2544_12615 PF01063 Amino-transferase class IV E2544_12620 PF13649 Methyltransferase domain E2544_12625 PF00211 Adenylate and Guanylate cyclase catalytic domain E2544_12630 PF18267 Rubredoxin NAD+ reductase C-terminal domain E2544_12630 PF04324 BFD-like [2Fe-2S] binding domain E2544_12630 PF01077 Nitrite and sulphite reductase 4Fe-4S domain E2544_12630 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain E2544_12630 PF13806 Rieske-like [2Fe-2S] domain E2544_12630 PF07992 Pyridine nucleotide-disulphide oxidoreductase E2544_12635 PF04324 BFD-like [2Fe-2S] binding domain E2544_12635 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain E2544_12635 PF07992 Pyridine nucleotide-disulphide oxidoreductase E2544_12635 PF13806 Rieske-like [2Fe-2S] domain E2544_12635 PF18267 Rubredoxin NAD+ reductase C-terminal domain E2544_12635 PF01077 Nitrite and sulphite reductase 4Fe-4S domain E2544_12640 PF03466 LysR substrate binding domain E2544_12640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_12645 PF05199 GMC oxidoreductase E2544_12645 PF00732 GMC oxidoreductase E2544_12655 PF12697 Alpha/beta hydrolase family E2544_12660 PF02811 PHP domain E2544_12665 PF01272 Transcription elongation factor, GreA/GreB, C-term E2544_12665 PF03449 Transcription elongation factor, N-terminal E2544_12670 PF03480 Bacterial extracellular solute-binding protein, family 7 E2544_12675 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component E2544_12685 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain E2544_12685 PF02769 AIR synthase related protein, C-terminal domain E2544_12685 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal E2544_12690 PF07715 TonB-dependent Receptor Plug Domain E2544_12690 PF00593 TonB dependent receptor E2544_12695 PF16220 Domain of unknown function (DUF4880) E2544_12695 PF04773 FecR protein E2544_12700 PF04542 Sigma-70 region 2 E2544_12700 PF08281 Sigma-70, region 4 E2544_12705 PF00672 HAMP domain E2544_12705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E2544_12705 PF02203 Tar ligand binding domain homologue E2544_12710 PF01546 Peptidase family M20/M25/M40 E2544_12710 PF07687 Peptidase dimerisation domain E2544_12720 PF03401 Tripartite tricarboxylate transporter family receptor E2544_12730 PF03401 Tripartite tricarboxylate transporter family receptor E2544_12740 PF00884 Sulfatase E2544_12740 PF16347 Domain of unknown function (DUF4976) E2544_12745 PF03466 LysR substrate binding domain E2544_12745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_12770 PF01565 FAD binding domain E2544_12770 PF08031 Berberine and berberine like E2544_12775 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) E2544_12805 PF17151 Periplasmic sensor domain E2544_12805 PF00990 Diguanylate cyclase, GGDEF domain E2544_12810 PF00753 Metallo-beta-lactamase superfamily E2544_12810 PF14863 Alkyl sulfatase dimerisation E2544_12810 PF14864 Alkyl sulfatase C-terminal E2544_12840 PF00970 Oxidoreductase FAD-binding domain E2544_12840 PF00111 2Fe-2S iron-sulfur cluster binding domain E2544_12840 PF00175 Oxidoreductase NAD-binding domain E2544_12845 PF00392 Bacterial regulatory proteins, gntR family E2544_12845 PF00155 Aminotransferase class I and II E2544_12850 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily E2544_12865 PF01070 FMN-dependent dehydrogenase E2544_12870 PF12951 Passenger-associated-transport-repeat E2544_12890 PF00583 Acetyltransferase (GNAT) family E2544_12895 PF12833 Helix-turn-helix domain E2544_12895 PF01965 DJ-1/PfpI family E2544_12900 PF00857 Isochorismatase family E2544_12905 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase E2544_12905 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase E2544_12910 PF00920 Dehydratase family E2544_12920 PF07690 Major Facilitator Superfamily E2544_12925 PF03466 LysR substrate binding domain E2544_12925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_12930 PF12228 Protein of unknown function (DUF3604) E2544_12935 PF03466 LysR substrate binding domain E2544_12935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_12940 PF03401 Tripartite tricarboxylate transporter family receptor E2544_12975 PF16220 Domain of unknown function (DUF4880) E2544_12975 PF04773 FecR protein E2544_12990 PF04829 Pre-toxin domain with VENN motif E2544_12990 PF13332 Hemagglutinin repeat E2544_12990 PF04829 Pre-toxin domain with VENN motif E2544_12990 PF04829 Pre-toxin domain with VENN motif E2544_12990 PF05860 haemagglutination activity domain E2544_12990 PF13332 Hemagglutinin repeat E2544_12990 PF13332 Hemagglutinin repeat E2544_12990 PF05860 haemagglutination activity domain E2544_12990 PF05860 haemagglutination activity domain E2544_13065 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E2544_13070 PF00005 ABC transporter E2544_13070 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E2544_13075 PF00005 ABC transporter E2544_13075 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E2544_13080 PF12911 N-terminal TM domain of oligopeptide transport permease C E2544_13080 PF00528 Binding-protein-dependent transport system inner membrane component E2544_13085 PF00528 Binding-protein-dependent transport system inner membrane component E2544_13090 PF13454 FAD-NAD(P)-binding E2544_13095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_13095 PF03466 LysR substrate binding domain E2544_13100 PF00593 TonB dependent receptor E2544_13100 PF07715 TonB-dependent Receptor Plug Domain E2544_13115 PF00691 OmpA family E2544_13115 PF01389 OmpA-like transmembrane domain E2544_13150 PF01757 Acyltransferase family E2544_13155 PF00478 IMP dehydrogenase / GMP reductase domain E2544_13155 PF00571 CBS domain E2544_13160 PF02540 NAD synthase E2544_13160 PF00117 Glutamine amidotransferase class-I E2544_13160 PF00958 GMP synthase C terminal domain E2544_13165 PF03401 Tripartite tricarboxylate transporter family receptor E2544_13170 PF00106 short chain dehydrogenase E2544_13180 PF13460 NAD(P)H-binding E2544_13200 PF03466 LysR substrate binding domain E2544_13200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_13205 PF00205 Thiamine pyrophosphate enzyme, central domain E2544_13205 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain E2544_13205 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E2544_13210 PF08267 Cobalamin-independent synthase, N-terminal domain E2544_13210 PF01717 Cobalamin-independent synthase, Catalytic domain E2544_13220 PF03358 NADPH-dependent FMN reductase E2544_13225 PF03466 LysR substrate binding domain E2544_13225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_13230 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain E2544_13230 PF13378 Enolase C-terminal domain-like E2544_13235 PF00528 Binding-protein-dependent transport system inner membrane component E2544_13240 PF00005 ABC transporter E2544_13250 PF00732 GMC oxidoreductase E2544_13250 PF05199 GMC oxidoreductase E2544_13255 PF00155 Aminotransferase class I and II E2544_13255 PF00392 Bacterial regulatory proteins, gntR family E2544_13260 PF01909 Nucleotidyltransferase domain E2544_13260 PF13427 Domain of unknown function (DUF4111) E2544_13275 PF12833 Helix-turn-helix domain E2544_13275 PF01965 DJ-1/PfpI family E2544_13280 PF00106 short chain dehydrogenase E2544_13285 PF07690 Major Facilitator Superfamily E2544_13295 PF03466 LysR substrate binding domain E2544_13295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_13300 PF03401 Tripartite tricarboxylate transporter family receptor E2544_13305 PF01070 FMN-dependent dehydrogenase E2544_13310 PF00005 ABC transporter E2544_13310 PF12848 ABC transporter E2544_13350 PF03401 Tripartite tricarboxylate transporter family receptor E2544_13355 PF17645 Arylmalonate decarboxylase E2544_13360 PF13618 Gluconate 2-dehydrogenase subunit 3 E2544_13365 PF00732 GMC oxidoreductase E2544_13365 PF05199 GMC oxidoreductase E2544_13370 PF00034 Cytochrome c E2544_13370 PF13442 Cytochrome C oxidase, cbb3-type, subunit III E2544_13375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_13375 PF03466 LysR substrate binding domain E2544_13380 PF07690 Major Facilitator Superfamily E2544_13385 PF03928 Haem-degrading E2544_13395 PF00248 Aldo/keto reductase family E2544_13400 PF00296 Luciferase-like monooxygenase E2544_13405 PF00724 NADH:flavin oxidoreductase / NADH oxidase family E2544_13410 PF00248 Aldo/keto reductase family E2544_13425 PF08774 VRR-NUC domain E2544_13425 PF18081 Fanconi anemia-associated nuclease SAP domain E2544_13440 PF01425 Amidase E2544_13445 PF12729 Four helix bundle sensory module for signal transduction E2544_13445 PF00672 HAMP domain E2544_13445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E2544_13455 PF01739 CheR methyltransferase, SAM binding domain E2544_13465 PF00072 Response regulator receiver domain E2544_13465 PF01584 CheW-like domain E2544_13465 PF01627 Hpt domain E2544_13465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2544_13470 PF00072 Response regulator receiver domain E2544_13470 PF01339 CheB methylesterase E2544_13475 PF00563 EAL domain E2544_13475 PF01590 GAF domain E2544_13475 PF00990 Diguanylate cyclase, GGDEF domain E2544_13475 PF00360 Phytochrome region E2544_13480 PF01037 Lrp/AsnC ligand binding domain E2544_13485 PF01053 Cys/Met metabolism PLP-dependent enzyme E2544_13490 PF07690 Major Facilitator Superfamily E2544_13505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_13505 PF03466 LysR substrate binding domain E2544_13515 PF03797 Autotransporter beta-domain E2544_13520 PF12951 Passenger-associated-transport-repeat E2544_13525 PF00005 ABC transporter E2544_13530 PF03401 Tripartite tricarboxylate transporter family receptor E2544_13535 PF00501 AMP-binding enzyme E2544_13535 PF13193 AMP-binding enzyme C-terminal domain E2544_13540 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E2544_13540 PF02770 Acyl-CoA dehydrogenase, middle domain E2544_13540 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E2544_13545 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E2544_13545 PF02770 Acyl-CoA dehydrogenase, middle domain E2544_13545 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E2544_13550 PF02803 Thiolase, C-terminal domain E2544_13550 PF00108 Thiolase, N-terminal domain E2544_13555 PF00378 Enoyl-CoA hydratase/isomerase E2544_13555 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain E2544_13555 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain E2544_13560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_13560 PF03466 LysR substrate binding domain E2544_13565 PF02447 GntP family permease E2544_13570 PF04286 Protein of unknown function (DUF445) E2544_13575 PF00080 Copper/zinc superoxide dismutase (SODC) E2544_13580 PF13417 Glutathione S-transferase, N-terminal domain E2544_13580 PF00043 Glutathione S-transferase, C-terminal domain E2544_13590 PF00557 Metallopeptidase family M24 E2544_13605 PF00691 OmpA family E2544_13620 PF03466 LysR substrate binding domain E2544_13620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_13630 PF02423 Ornithine cyclodeaminase/mu-crystallin family E2544_13640 PF00221 Aromatic amino acid lyase E2544_13645 PF00486 Transcriptional regulatory protein, C terminal E2544_13645 PF00072 Response regulator receiver domain E2544_13650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2544_13650 PF00512 His Kinase A (phospho-acceptor) domain E2544_13650 PF08521 Two-component sensor kinase N-terminal E2544_13670 PF03480 Bacterial extracellular solute-binding protein, family 7 E2544_13680 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component E2544_13690 PF13302 Acetyltransferase (GNAT) domain E2544_13695 PF01047 MarR family E2544_13715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_13715 PF03466 LysR substrate binding domain E2544_13725 PF13419 Haloacid dehalogenase-like hydrolase E2544_13730 PF00892 EamA-like transporter family E2544_13740 PF04542 Sigma-70 region 2 E2544_13740 PF08281 Sigma-70, region 4 E2544_13750 PF03795 YCII-related domain E2544_13760 PF03795 YCII-related domain E2544_13765 PF00916 Sulfate permease family E2544_13765 PF01740 STAS domain E2544_13770 PF01810 LysE type translocator E2544_13775 PF01037 Lrp/AsnC ligand binding domain E2544_13780 PF00691 OmpA family E2544_13780 PF13677 Membrane MotB of proton-channel complex MotA/MotB E2544_13785 PF01618 MotA/TolQ/ExbB proton channel family E2544_13800 PF02311 AraC-like ligand binding domain E2544_13800 PF12833 Helix-turn-helix domain E2544_13810 PF04463 Protein of unknown function (DUF523) E2544_13820 PF03401 Tripartite tricarboxylate transporter family receptor E2544_13835 PF00440 Bacterial regulatory proteins, tetR family E2544_13845 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E2544_13845 PF00005 ABC transporter E2544_13850 PF00005 ABC transporter E2544_13850 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E2544_13855 PF12911 N-terminal TM domain of oligopeptide transport permease C E2544_13855 PF00528 Binding-protein-dependent transport system inner membrane component E2544_13860 PF00528 Binding-protein-dependent transport system inner membrane component E2544_13865 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E2544_13870 PF00392 Bacterial regulatory proteins, gntR family E2544_13870 PF07729 FCD domain E2544_13875 PF00266 Aminotransferase class-V E2544_13885 PF00248 Aldo/keto reductase family E2544_13890 PF00083 Sugar (and other) transporter E2544_13895 PF00732 GMC oxidoreductase E2544_13895 PF05199 GMC oxidoreductase E2544_13900 PF09339 IclR helix-turn-helix domain E2544_13900 PF01614 Bacterial transcriptional regulator E2544_13905 PF00392 Bacterial regulatory proteins, gntR family E2544_13905 PF07729 FCD domain E2544_13910 PF03401 Tripartite tricarboxylate transporter family receptor E2544_13915 PF01546 Peptidase family M20/M25/M40 E2544_13915 PF07687 Peptidase dimerisation domain E2544_13920 PF07690 Major Facilitator Superfamily E2544_13925 PF06983 3-demethylubiquinone-9 3-methyltransferase E2544_13955 PF01965 DJ-1/PfpI family E2544_13960 PF00581 Rhodanese-like domain E2544_13965 PF03797 Autotransporter beta-domain E2544_13970 PF00990 Diguanylate cyclase, GGDEF domain E2544_13970 PF17158 Membrane-associated sensor, integral membrane domain E2544_13980 PF00561 alpha/beta hydrolase fold E2544_14000 PF00291 Pyridoxal-phosphate dependent enzyme E2544_14005 PF07687 Peptidase dimerisation domain E2544_14005 PF01546 Peptidase family M20/M25/M40 E2544_14010 PF00795 Carbon-nitrogen hydrolase E2544_14015 PF07690 Major Facilitator Superfamily E2544_14020 PF07687 Peptidase dimerisation domain E2544_14020 PF01546 Peptidase family M20/M25/M40 E2544_14025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_14025 PF03466 LysR substrate binding domain E2544_14035 PF02811 PHP domain E2544_14035 PF14579 Helix-hairpin-helix motif E2544_14035 PF17657 Bacterial DNA polymerase III alpha subunit finger domain E2544_14035 PF07733 Bacterial DNA polymerase III alpha NTPase domain E2544_14050 PF00324 Amino acid permease E2544_14055 PF02230 Phospholipase/Carboxylesterase E2544_14060 PF02321 Outer membrane efflux protein E2544_14065 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E2544_14065 PF00529 HlyD membrane-fusion protein of T1SS E2544_14070 PF07869 Protein of unknown function (DUF1656) E2544_14085 PF01242 6-pyruvoyl tetrahydropterin synthase E2544_14095 PF00472 RF-1 domain E2544_14105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_14105 PF03466 LysR substrate binding domain E2544_14110 PF03401 Tripartite tricarboxylate transporter family receptor E2544_14115 PF01425 Amidase E2544_14125 PF00724 NADH:flavin oxidoreductase / NADH oxidase family E2544_14175 PF00005 ABC transporter E2544_14180 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E2544_14185 PF13977 BetI-type transcriptional repressor, C-terminal E2544_14185 PF00440 Bacterial regulatory proteins, tetR family E2544_14190 PF00107 Zinc-binding dehydrogenase E2544_14190 PF16884 N-terminal domain of oxidoreductase E2544_14200 PF01966 HD domain E2544_14200 PF00072 Response regulator receiver domain E2544_14205 PF16901 C-terminal domain of alpha-glycerophosphate oxidase E2544_14205 PF01266 FAD dependent oxidoreductase E2544_14210 PF00455 DeoR C terminal sensor domain E2544_14210 PF08220 DeoR-like helix-turn-helix domain E2544_14215 PF17912 MalK OB fold domain E2544_14215 PF00005 ABC transporter E2544_14220 PF08402 TOBE domain E2544_14220 PF00005 ABC transporter E2544_14225 PF00528 Binding-protein-dependent transport system inner membrane component E2544_14230 PF00528 Binding-protein-dependent transport system inner membrane component E2544_14245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_14245 PF03466 LysR substrate binding domain E2544_14250 PF03401 Tripartite tricarboxylate transporter family receptor E2544_14255 PF02615 Malate/L-lactate dehydrogenase E2544_14260 PF03401 Tripartite tricarboxylate transporter family receptor E2544_14265 PF00753 Metallo-beta-lactamase superfamily E2544_14275 PF13185 GAF domain E2544_14275 PF00990 Diguanylate cyclase, GGDEF domain E2544_14285 PF00723 Glycosyl hydrolases family 15 E2544_14290 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E2544_14290 PF02770 Acyl-CoA dehydrogenase, middle domain E2544_14290 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E2544_14315 PF01037 Lrp/AsnC ligand binding domain E2544_14320 PF01266 FAD dependent oxidoreductase E2544_14325 PF12320 Type 5 capsule protein repressor C-terminal domain E2544_14325 PF00149 Calcineurin-like phosphoesterase E2544_14340 PF02770 Acyl-CoA dehydrogenase, middle domain E2544_14340 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E2544_14340 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E2544_14345 PF17932 Tetracyclin repressor-like, C-terminal domain E2544_14345 PF00440 Bacterial regulatory proteins, tetR family E2544_14355 PF02515 CoA-transferase family III E2544_14360 PF03401 Tripartite tricarboxylate transporter family receptor E2544_14370 PF03401 Tripartite tricarboxylate transporter family receptor E2544_14375 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter E2544_14375 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus E2544_14375 PF00361 Proton-conducting membrane transporter E2544_14375 PF13244 Domain of unknown function (DUF4040) E2544_14380 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L E2544_14385 PF00361 Proton-conducting membrane transporter E2544_14390 PF01899 Na+/H+ ion antiporter subunit E2544_14395 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) E2544_14415 PF14437 MafB19-like deaminase E2544_14420 PF17676 LD-carboxypeptidase C-terminal domain E2544_14420 PF02016 LD-carboxypeptidase N-terminal domain E2544_14440 PF00005 ABC transporter E2544_14440 PF12848 ABC transporter E2544_14445 PF07690 Major Facilitator Superfamily E2544_14450 PF00005 ABC transporter E2544_14470 PF01205 Uncharacterized protein family UPF0029 E2544_14475 PF00085 Thioredoxin E2544_14480 PF00296 Luciferase-like monooxygenase E2544_14485 PF00860 Permease family E2544_14490 PF00814 Glycoprotease family E2544_14495 PF02660 Glycerol-3-phosphate acyltransferase E2544_14500 PF01975 Survival protein SurE E2544_14510 PF01551 Peptidase family M23 E2544_14510 PF01476 LysM domain E2544_14530 PF05958 tRNA (Uracil-5-)-methyltransferase E2544_14535 PF00376 MerR family regulatory protein E2544_14535 PF09278 MerR, DNA binding E2544_14545 PF08534 Redoxin E2544_14545 PF00462 Glutaredoxin E2544_14550 PF07992 Pyridine nucleotide-disulphide oxidoreductase E2544_14550 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E2544_14555 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ E2544_14560 PF03009 Glycerophosphoryl diester phosphodiesterase family E2544_14565 PF01546 Peptidase family M20/M25/M40 E2544_14565 PF07687 Peptidase dimerisation domain E2544_14570 PF13145 PPIC-type PPIASE domain E2544_14575 PF13472 GDSL-like Lipase/Acylhydrolase family E2544_14580 PF00005 ABC transporter E2544_14590 PF00528 Binding-protein-dependent transport system inner membrane component E2544_14595 PF00005 ABC transporter E2544_14595 PF08402 TOBE domain E2544_14600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_14600 PF03466 LysR substrate binding domain E2544_14610 PF12241 Trans-2-enoyl-CoA reductase catalytic region E2544_14610 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase E2544_14610 PF07055 Enoyl reductase FAD binding domain E2544_14620 PF03466 LysR substrate binding domain E2544_14620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_14635 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component E2544_14645 PF01425 Amidase E2544_14650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_14650 PF03466 LysR substrate binding domain E2544_14655 PF07286 Protein of unknown function (DUF1445) E2544_14665 PF02653 Branched-chain amino acid transport system / permease component E2544_14675 PF12399 Branched-chain amino acid ATP-binding cassette transporter E2544_14675 PF00005 ABC transporter E2544_14680 PF00005 ABC transporter E2544_14685 PF13609 Gram-negative porin E2544_14690 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component E2544_14705 PF09297 NADH pyrophosphatase zinc ribbon domain E2544_14705 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain E2544_14705 PF00293 NUDIX domain E2544_14715 PF01968 Hydantoinase/oxoprolinase E2544_14715 PF05378 Hydantoinase/oxoprolinase N-terminal region E2544_14725 PF00497 Bacterial extracellular solute-binding proteins, family 3 E2544_14730 PF00528 Binding-protein-dependent transport system inner membrane component E2544_14735 PF00005 ABC transporter E2544_14740 PF02824 TGS domain E2544_14740 PF04607 Region found in RelA / SpoT proteins E2544_14740 PF13291 ACT domain E2544_14745 PF01192 RNA polymerase Rpb6 E2544_14750 PF00625 Guanylate kinase E2544_14755 PF13442 Cytochrome C oxidase, cbb3-type, subunit III E2544_14760 PF00034 Cytochrome c E2544_14770 PF00877 NlpC/P60 family E2544_14775 PF01048 Phosphorylase superfamily E2544_14775 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus E2544_14780 PF00324 Amino acid permease E2544_14785 PF08340 Domain of unknown function (DUF1732) E2544_14785 PF03755 YicC-like family, N-terminal region E2544_14790 PF01138 3' exoribonuclease family, domain 1 E2544_14790 PF03725 3' exoribonuclease family, domain 2 E2544_14800 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E2544_14800 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E2544_14800 PF02770 Acyl-CoA dehydrogenase, middle domain E2544_14810 PF03707 Bacterial signalling protein N terminal repeat E2544_14810 PF00990 Diguanylate cyclase, GGDEF domain E2544_14810 PF00563 EAL domain E2544_14815 PF01725 Ham1 family E2544_14820 PF04055 Radical SAM superfamily E2544_14820 PF06969 HemN C-terminal domain E2544_14830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2544_14830 PF00512 His Kinase A (phospho-acceptor) domain E2544_14830 PF00989 PAS fold E2544_14835 PF00158 Sigma-54 interaction domain E2544_14835 PF00072 Response regulator receiver domain E2544_14835 PF02954 Bacterial regulatory protein, Fis family E2544_14840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_14840 PF03466 LysR substrate binding domain E2544_14845 PF17954 Quercetinase C-terminal cupin domain E2544_14845 PF02678 Pirin E2544_14850 PF02678 Pirin E2544_14850 PF05726 Pirin C-terminal cupin domain E2544_14855 PF03401 Tripartite tricarboxylate transporter family receptor E2544_14860 PF00005 ABC transporter E2544_14860 PF08402 TOBE domain E2544_14865 PF00528 Binding-protein-dependent transport system inner membrane component E2544_14870 PF13416 Bacterial extracellular solute-binding protein E2544_14875 PF00970 Oxidoreductase FAD-binding domain E2544_14875 PF00175 Oxidoreductase NAD-binding domain E2544_14885 PF03401 Tripartite tricarboxylate transporter family receptor E2544_14890 PF00106 short chain dehydrogenase E2544_14900 PF09339 IclR helix-turn-helix domain E2544_14900 PF01614 Bacterial transcriptional regulator E2544_14905 PF03401 Tripartite tricarboxylate transporter family receptor E2544_14920 PF03466 LysR substrate binding domain E2544_14920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_14925 PF01042 Endoribonuclease L-PSP E2544_14930 PF00270 DEAD/DEAH box helicase E2544_14930 PF00271 Helicase conserved C-terminal domain E2544_14930 PF17191 RecG wedge domain E2544_14935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_14935 PF03466 LysR substrate binding domain E2544_14940 PF00210 Ferritin-like domain E2544_14950 PF13458 Periplasmic binding protein E2544_14955 PF00072 Response regulator receiver domain E2544_14955 PF00486 Transcriptional regulatory protein, C terminal E2544_14960 PF00672 HAMP domain E2544_14960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2544_14960 PF00512 His Kinase A (phospho-acceptor) domain E2544_14975 PF17912 MalK OB fold domain E2544_14975 PF00005 ABC transporter E2544_14980 PF00528 Binding-protein-dependent transport system inner membrane component E2544_14985 PF00528 Binding-protein-dependent transport system inner membrane component E2544_14990 PF13416 Bacterial extracellular solute-binding protein E2544_14995 PF03807 NADP oxidoreductase coenzyme F420-dependent E2544_14995 PF14748 Pyrroline-5-carboxylate reductase dimerisation E2544_15000 PF02592 Putative vitamin uptake transporter E2544_15005 PF13458 Periplasmic binding protein E2544_15010 PF02653 Branched-chain amino acid transport system / permease component E2544_15015 PF11862 Domain of unknown function (DUF3382) E2544_15015 PF02653 Branched-chain amino acid transport system / permease component E2544_15020 PF00005 ABC transporter E2544_15020 PF12399 Branched-chain amino acid ATP-binding cassette transporter E2544_15025 PF00005 ABC transporter E2544_15030 PF01177 Asp/Glu/Hydantoin racemase E2544_15035 PF07969 Amidohydrolase family E2544_15040 PF03401 Tripartite tricarboxylate transporter family receptor E2544_15045 PF03466 LysR substrate binding domain E2544_15045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_15050 PF02798 Glutathione S-transferase, N-terminal domain E2544_15050 PF00043 Glutathione S-transferase, C-terminal domain E2544_15055 PF07995 Glucose / Sorbosone dehydrogenase E2544_15065 PF00892 EamA-like transporter family E2544_15070 PF04241 Protein of unknown function (DUF423) E2544_15085 PF08240 Alcohol dehydrogenase GroES-like domain E2544_15085 PF00107 Zinc-binding dehydrogenase E2544_15100 PF00491 Arginase family E2544_15105 PF00202 Aminotransferase class-III E2544_15110 PF03180 NLPA lipoprotein E2544_15115 PF00990 Diguanylate cyclase, GGDEF domain E2544_15115 PF00072 Response regulator receiver domain E2544_15130 PF00149 Calcineurin-like phosphoesterase E2544_15135 PF01070 FMN-dependent dehydrogenase E2544_15140 PF02666 Phosphatidylserine decarboxylase E2544_15145 PF00067 Cytochrome P450 E2544_15155 PF03466 LysR substrate binding domain E2544_15155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_15160 PF03401 Tripartite tricarboxylate transporter family receptor E2544_15170 PF12848 ABC transporter E2544_15170 PF00005 ABC transporter E2544_15175 PF00768 D-alanyl-D-alanine carboxypeptidase E2544_15180 PF03328 HpcH/HpaI aldolase/citrate lyase family E2544_15185 PF00072 Response regulator receiver domain E2544_15185 PF00486 Transcriptional regulatory protein, C terminal E2544_15200 PF01266 FAD dependent oxidoreductase E2544_15205 PF00793 DAHP synthetase I family E2544_15210 PF00989 PAS fold E2544_15210 PF00990 Diguanylate cyclase, GGDEF domain E2544_15210 PF01590 GAF domain E2544_15210 PF00563 EAL domain E2544_15215 PF00175 Oxidoreductase NAD-binding domain E2544_15215 PF00111 2Fe-2S iron-sulfur cluster binding domain E2544_15215 PF00970 Oxidoreductase FAD-binding domain E2544_15225 PF03466 LysR substrate binding domain E2544_15225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_15230 PF07690 Major Facilitator Superfamily E2544_15240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2544_15240 PF00512 His Kinase A (phospho-acceptor) domain E2544_15240 PF00072 Response regulator receiver domain E2544_15240 PF08448 PAS fold E2544_15240 PF13188 PAS domain E2544_15245 PF04963 Sigma-54 factor, core binding domain E2544_15245 PF00309 Sigma-54 factor, Activator interacting domain (AID) E2544_15245 PF04552 Sigma-54, DNA binding domain E2544_15250 PF02954 Bacterial regulatory protein, Fis family E2544_15250 PF00158 Sigma-54 interaction domain E2544_15255 PF00158 Sigma-54 interaction domain E2544_15255 PF00072 Response regulator receiver domain E2544_15255 PF02954 Bacterial regulatory protein, Fis family E2544_15315 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E2544_15315 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E2544_15325 PF12805 FUSC-like inner membrane protein yccS E2544_15330 PF00990 Diguanylate cyclase, GGDEF domain E2544_15330 PF03707 Bacterial signalling protein N terminal repeat E2544_15330 PF13188 PAS domain E2544_15330 PF00563 EAL domain E2544_15335 PF00128 Alpha amylase, catalytic domain E2544_15340 PF02446 4-alpha-glucanotransferase E2544_15345 PF00128 Alpha amylase, catalytic domain E2544_15345 PF11941 Domain of unknown function (DUF3459) E2544_15345 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) E2544_15350 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) E2544_15350 PF00128 Alpha amylase, catalytic domain E2544_15355 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) E2544_15355 PF02806 Alpha amylase, C-terminal all-beta domain E2544_15355 PF00128 Alpha amylase, catalytic domain E2544_15360 PF16657 Maltogenic Amylase, C-terminal domain E2544_15360 PF00128 Alpha amylase, catalytic domain E2544_15365 PF00128 Alpha amylase, catalytic domain E2544_15365 PF11896 Domain of unknown function (DUF3416) E2544_15370 PF00534 Glycosyl transferases group 1 E2544_15370 PF08323 Starch synthase catalytic domain E2544_15375 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain E2544_15375 PF00205 Thiamine pyrophosphate enzyme, central domain E2544_15375 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E2544_15395 PF03706 Lysylphosphatidylglycerol synthase TM region E2544_15400 PF13091 PLD-like domain E2544_15405 PF03372 Endonuclease/Exonuclease/phosphatase family E2544_15410 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E2544_15410 PF00005 ABC transporter E2544_15415 PF02308 MgtC family E2544_15425 PF03471 Transporter associated domain E2544_15425 PF03741 Integral membrane protein TerC family E2544_15435 PF03781 Sulfatase-modifying factor enzyme 1 E2544_15440 PF17863 AAA lid domain E2544_15440 PF07726 ATPase family associated with various cellular activities (AAA) E2544_15460 PF13519 von Willebrand factor type A domain E2544_15475 PF00884 Sulfatase E2544_15490 PF02525 Flavodoxin-like fold E2544_15500 PF00392 Bacterial regulatory proteins, gntR family E2544_15500 PF00155 Aminotransferase class I and II E2544_15510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2544_15510 PF00672 HAMP domain E2544_15510 PF00512 His Kinase A (phospho-acceptor) domain E2544_15520 PF00378 Enoyl-CoA hydratase/isomerase E2544_15525 PF07690 Major Facilitator Superfamily E2544_15535 PF01970 Tripartite tricarboxylate transporter TctA family E2544_15550 PF00990 Diguanylate cyclase, GGDEF domain E2544_15550 PF17158 Membrane-associated sensor, integral membrane domain E2544_15565 PF01594 AI-2E family transporter E2544_15575 PF17676 LD-carboxypeptidase C-terminal domain E2544_15575 PF02016 LD-carboxypeptidase N-terminal domain E2544_15590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_15590 PF03466 LysR substrate binding domain E2544_15605 PF00753 Metallo-beta-lactamase superfamily E2544_15615 PF00171 Aldehyde dehydrogenase family E2544_15620 PF03401 Tripartite tricarboxylate transporter family receptor E2544_15625 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase E2544_15625 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase E2544_15635 PF13607 Succinyl-CoA ligase like flavodoxin domain E2544_15635 PF13380 CoA binding domain E2544_15635 PF00583 Acetyltransferase (GNAT) family E2544_15640 PF02770 Acyl-CoA dehydrogenase, middle domain E2544_15640 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E2544_15640 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E2544_15650 PF13520 Amino acid permease E2544_15665 PF02798 Glutathione S-transferase, N-terminal domain E2544_15665 PF00043 Glutathione S-transferase, C-terminal domain E2544_15680 PF00378 Enoyl-CoA hydratase/isomerase E2544_15685 PF02515 CoA-transferase family III E2544_15690 PF01425 Amidase E2544_15700 PF00392 Bacterial regulatory proteins, gntR family E2544_15700 PF07729 FCD domain E2544_15705 PF07690 Major Facilitator Superfamily E2544_15730 PF03358 NADPH-dependent FMN reductase E2544_15740 PF01758 Sodium Bile acid symporter family E2544_15750 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily E2544_15755 PF01022 Bacterial regulatory protein, arsR family E2544_15790 PF03401 Tripartite tricarboxylate transporter family receptor E2544_15795 PF03737 Aldolase/RraA E2544_15800 PF02585 GlcNAc-PI de-N-acetylase E2544_15840 PF01494 FAD binding domain E2544_15850 PF13193 AMP-binding enzyme C-terminal domain E2544_15850 PF00501 AMP-binding enzyme E2544_15860 PF01804 Penicillin amidase E2544_15885 PF00083 Sugar (and other) transporter E2544_15895 PF03466 LysR substrate binding domain E2544_15895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_15900 PF00857 Isochorismatase family E2544_15915 PF00850 Histone deacetylase domain E2544_15920 PF00392 Bacterial regulatory proteins, gntR family E2544_15920 PF07729 FCD domain E2544_15925 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E2544_15930 PF00528 Binding-protein-dependent transport system inner membrane component E2544_15935 PF00528 Binding-protein-dependent transport system inner membrane component E2544_15935 PF12911 N-terminal TM domain of oligopeptide transport permease C E2544_15940 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E2544_15940 PF00005 ABC transporter E2544_15945 PF00005 ABC transporter E2544_15945 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E2544_15955 PF03480 Bacterial extracellular solute-binding protein, family 7 E2544_15955 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component E2544_15965 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component E2544_15975 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain E2544_15975 PF00205 Thiamine pyrophosphate enzyme, central domain E2544_15975 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E2544_15980 PF01546 Peptidase family M20/M25/M40 E2544_15980 PF07687 Peptidase dimerisation domain E2544_15985 PF00171 Aldehyde dehydrogenase family E2544_15990 PF03401 Tripartite tricarboxylate transporter family receptor E2544_15995 PF00596 Class II Aldolase and Adducin N-terminal domain E2544_16000 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain E2544_16000 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E2544_16000 PF00205 Thiamine pyrophosphate enzyme, central domain E2544_16005 PF03466 LysR substrate binding domain E2544_16005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_16015 PF03401 Tripartite tricarboxylate transporter family receptor E2544_16020 PF00701 Dihydrodipicolinate synthetase family E2544_16030 PF00585 C-terminal regulatory domain of Threonine dehydratase E2544_16030 PF00291 Pyridoxal-phosphate dependent enzyme E2544_16035 PF03971 Monomeric isocitrate dehydrogenase E2544_16040 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase E2544_16045 PF03649 Uncharacterised protein family (UPF0014) E2544_16050 PF00005 ABC transporter E2544_16050 PF12857 TOBE-like domain E2544_16060 PF07660 Secretin and TonB N terminus short domain E2544_16060 PF00593 TonB dependent receptor E2544_16060 PF07715 TonB-dependent Receptor Plug Domain E2544_16065 PF00005 ABC transporter E2544_16070 PF00528 Binding-protein-dependent transport system inner membrane component E2544_16080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_16080 PF03466 LysR substrate binding domain E2544_16090 PF00528 Binding-protein-dependent transport system inner membrane component E2544_16095 PF00528 Binding-protein-dependent transport system inner membrane component E2544_16100 PF00491 Arginase family E2544_16105 PF00005 ABC transporter E2544_16110 PF01042 Endoribonuclease L-PSP E2544_16120 PF00884 Sulfatase E2544_16120 PF16347 Domain of unknown function (DUF4976) E2544_16125 PF01494 FAD binding domain E2544_16130 PF00561 alpha/beta hydrolase fold E2544_16140 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily E2544_16155 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E2544_16155 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain E2544_16165 PF08534 Redoxin E2544_16180 PF00083 Sugar (and other) transporter E2544_16185 PF00501 AMP-binding enzyme E2544_16185 PF13193 AMP-binding enzyme C-terminal domain E2544_16190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_16190 PF03466 LysR substrate binding domain E2544_16195 PF01118 Semialdehyde dehydrogenase, NAD binding domain E2544_16200 PF03466 LysR substrate binding domain E2544_16200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_16205 PF00654 Voltage gated chloride channel E2544_16220 PF00072 Response regulator receiver domain E2544_16220 PF00512 His Kinase A (phospho-acceptor) domain E2544_16220 PF08448 PAS fold E2544_16220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2544_16220 PF13426 PAS domain E2544_16225 PF00196 Bacterial regulatory proteins, luxR family E2544_16225 PF00072 Response regulator receiver domain E2544_16245 PF03466 LysR substrate binding domain E2544_16245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_16255 PF01053 Cys/Met metabolism PLP-dependent enzyme E2544_16270 PF00528 Binding-protein-dependent transport system inner membrane component E2544_16290 PF00109 Beta-ketoacyl synthase, N-terminal domain E2544_16290 PF00107 Zinc-binding dehydrogenase E2544_16290 PF02801 Beta-ketoacyl synthase, C-terminal domain E2544_16290 PF08659 KR domain E2544_16290 PF00550 Phosphopantetheine attachment site E2544_16290 PF08240 Alcohol dehydrogenase GroES-like domain E2544_16290 PF00698 Acyl transferase domain E2544_16290 PF14765 Polyketide synthase dehydratase E2544_16290 PF16197 Ketoacyl-synthetase C-terminal extension E2544_16300 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E2544_16305 PF00528 Binding-protein-dependent transport system inner membrane component E2544_16310 PF00528 Binding-protein-dependent transport system inner membrane component E2544_16310 PF12911 N-terminal TM domain of oligopeptide transport permease C E2544_16315 PF00501 AMP-binding enzyme E2544_16315 PF13193 AMP-binding enzyme C-terminal domain E2544_16330 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase E2544_16330 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase E2544_16340 PF01738 Dienelactone hydrolase family E2544_16345 PF05199 GMC oxidoreductase E2544_16345 PF00732 GMC oxidoreductase E2544_16355 PF04444 Catechol dioxygenase N terminus E2544_16355 PF00775 Dioxygenase E2544_16360 PF03466 LysR substrate binding domain E2544_16360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_16365 PF00691 OmpA family E2544_16365 PF13488 Glycine zipper E2544_16370 PF12833 Helix-turn-helix domain E2544_16390 PF01661 Macro domain E2544_16395 PF01636 Phosphotransferase enzyme family E2544_16400 PF01590 GAF domain E2544_16400 PF00563 EAL domain E2544_16400 PF00990 Diguanylate cyclase, GGDEF domain E2544_16400 PF00360 Phytochrome region E2544_16405 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E2544_16405 PF02770 Acyl-CoA dehydrogenase, middle domain E2544_16405 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E2544_16410 PF03401 Tripartite tricarboxylate transporter family receptor E2544_16415 PF02515 CoA-transferase family III E2544_16420 PF03466 LysR substrate binding domain E2544_16420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_16425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_16425 PF03466 LysR substrate binding domain E2544_16430 PF03401 Tripartite tricarboxylate transporter family receptor E2544_16435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_16435 PF03466 LysR substrate binding domain E2544_16445 PF00355 Rieske [2Fe-2S] domain E2544_16455 PF00392 Bacterial regulatory proteins, gntR family E2544_16455 PF07729 FCD domain E2544_16460 PF00701 Dihydrodipicolinate synthetase family E2544_16465 PF03401 Tripartite tricarboxylate transporter family receptor E2544_16470 PF03401 Tripartite tricarboxylate transporter family receptor E2544_16475 PF03737 Aldolase/RraA E2544_16480 PF00920 Dehydratase family E2544_16485 PF00392 Bacterial regulatory proteins, gntR family E2544_16485 PF07729 FCD domain E2544_16500 PF00561 alpha/beta hydrolase fold E2544_16505 PF01053 Cys/Met metabolism PLP-dependent enzyme E2544_16515 PF00497 Bacterial extracellular solute-binding proteins, family 3 E2544_16520 PF00528 Binding-protein-dependent transport system inner membrane component E2544_16545 PF00072 Response regulator receiver domain E2544_16545 PF00196 Bacterial regulatory proteins, luxR family E2544_16550 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term E2544_16550 PF07730 Histidine kinase E2544_16550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2544_16550 PF00672 HAMP domain E2544_16555 PF03205 Molybdopterin guanine dinucleotide synthesis protein B E2544_16560 PF00484 Carbonic anhydrase E2544_16565 PF04055 Radical SAM superfamily E2544_16565 PF06463 Molybdenum Cofactor Synthesis C E2544_16570 PF09312 SurA N-terminal domain E2544_16570 PF00639 PPIC-type PPIASE domain E2544_16575 PF02665 Nitrate reductase gamma subunit E2544_16580 PF02613 Nitrate reductase delta subunit E2544_16585 PF13247 4Fe-4S dicluster domain E2544_16585 PF14711 Respiratory nitrate reductase beta C-terminal E2544_16590 PF14710 Respiratory nitrate reductase alpha N-terminal E2544_16590 PF01568 Molydopterin dinucleotide binding domain E2544_16590 PF00384 Molybdopterin oxidoreductase E2544_16595 PF07690 Major Facilitator Superfamily E2544_16600 PF07690 Major Facilitator Superfamily E2544_16635 PF01699 Sodium/calcium exchanger protein E2544_16640 PF01494 FAD binding domain E2544_16645 PF03466 LysR substrate binding domain E2544_16645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_16655 PF07660 Secretin and TonB N terminus short domain E2544_16655 PF00593 TonB dependent receptor E2544_16655 PF07715 TonB-dependent Receptor Plug Domain E2544_16705 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E2544_16710 PF00873 AcrB/AcrD/AcrF family E2544_16715 PF00873 AcrB/AcrD/AcrF family E2544_16720 PF03401 Tripartite tricarboxylate transporter family receptor E2544_16725 PF02515 CoA-transferase family III E2544_16730 PF00682 HMGL-like E2544_16735 PF01614 Bacterial transcriptional regulator E2544_16735 PF09339 IclR helix-turn-helix domain E2544_16740 PF17922 Tetracyclin repressor-like, C-terminal domain E2544_16740 PF00440 Bacterial regulatory proteins, tetR family E2544_16755 PF00501 AMP-binding enzyme E2544_16755 PF13193 AMP-binding enzyme C-terminal domain E2544_16765 PF01494 FAD binding domain E2544_16770 PF03401 Tripartite tricarboxylate transporter family receptor E2544_16775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_16775 PF03466 LysR substrate binding domain E2544_16785 PF03401 Tripartite tricarboxylate transporter family receptor E2544_16795 PF00199 Catalase E2544_16795 PF18011 C-terminal domain found in long catalases E2544_16795 PF06628 Catalase-related immune-responsive E2544_16830 PF03060 Nitronate monooxygenase E2544_16840 PF00391 PEP-utilising enzyme, mobile domain E2544_16840 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain E2544_16845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2544_16845 PF07689 KaiB domain E2544_16845 PF00512 His Kinase A (phospho-acceptor) domain E2544_16850 PF00072 Response regulator receiver domain E2544_16850 PF00486 Transcriptional regulatory protein, C terminal E2544_16855 PF01292 Prokaryotic cytochrome b561 E2544_16860 PF00174 Oxidoreductase molybdopterin binding domain E2544_16870 PF01641 SelR domain E2544_16875 PF01625 Peptide methionine sulfoxide reductase E2544_16885 PF00210 Ferritin-like domain E2544_16895 PF04328 Selenoprotein, putative E2544_16900 PF02554 Carbon starvation protein CstA E2544_16900 PF13722 5TM C-terminal transporter carbon starvation CstA E2544_16905 PF07730 Histidine kinase E2544_16905 PF17200 Single Cache domain 2 E2544_16910 PF00072 Response regulator receiver domain E2544_16910 PF00196 Bacterial regulatory proteins, luxR family E2544_16915 PF01227 GTP cyclohydrolase I E2544_16920 PF04069 Substrate binding domain of ABC-type glycine betaine transport system E2544_16925 PF00005 ABC transporter E2544_16930 PF00528 Binding-protein-dependent transport system inner membrane component E2544_16935 PF00392 Bacterial regulatory proteins, gntR family E2544_16935 PF00155 Aminotransferase class I and II E2544_16950 PF07683 Cobalamin synthesis protein cobW C-terminal domain E2544_16950 PF02492 CobW/HypB/UreG, nucleotide-binding domain E2544_16955 PF01979 Amidohydrolase family E2544_16960 PF00005 ABC transporter E2544_16960 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E2544_16965 PF00005 ABC transporter E2544_16965 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E2544_16970 PF12911 N-terminal TM domain of oligopeptide transport permease C E2544_16970 PF00528 Binding-protein-dependent transport system inner membrane component E2544_16975 PF00528 Binding-protein-dependent transport system inner membrane component E2544_16980 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E2544_16985 PF01515 Phosphate acetyl/butaryl transferase E2544_16990 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E2544_16990 PF00205 Thiamine pyrophosphate enzyme, central domain E2544_16990 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain E2544_16995 PF01614 Bacterial transcriptional regulator E2544_16995 PF09339 IclR helix-turn-helix domain E2544_17000 PF00270 DEAD/DEAH box helicase E2544_17000 PF03880 DbpA RNA binding domain E2544_17000 PF00271 Helicase conserved C-terminal domain E2544_17015 PF00578 AhpC/TSA family E2544_17020 PF02515 CoA-transferase family III E2544_17025 PF00875 DNA photolyase E2544_17025 PF03441 FAD binding domain of DNA photolyase E2544_17030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E2544_17030 PF08447 PAS fold E2544_17040 PF07690 Major Facilitator Superfamily E2544_17045 PF00255 Glutathione peroxidase E2544_17050 PF01037 Lrp/AsnC ligand binding domain E2544_17060 PF02798 Glutathione S-transferase, N-terminal domain E2544_17060 PF00043 Glutathione S-transferase, C-terminal domain E2544_17075 PF03099 Biotin/lipoate A/B protein ligase family E2544_17075 PF10437 Bacterial lipoate protein ligase C-terminus E2544_17085 PF13609 Gram-negative porin E2544_17090 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain E2544_17090 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase E2544_17095 PF00491 Arginase family E2544_17100 PF00005 ABC transporter E2544_17110 PF00497 Bacterial extracellular solute-binding proteins, family 3 E2544_17120 PF01425 Amidase E2544_17125 PF00005 ABC transporter E2544_17130 PF00005 ABC transporter E2544_17130 PF12399 Branched-chain amino acid ATP-binding cassette transporter E2544_17135 PF02653 Branched-chain amino acid transport system / permease component E2544_17135 PF11862 Domain of unknown function (DUF3382) E2544_17150 PF02515 CoA-transferase family III E2544_17155 PF00378 Enoyl-CoA hydratase/isomerase E2544_17165 PF00202 Aminotransferase class-III E2544_17180 PF01026 TatD related DNase E2544_17185 PF12169 DNA polymerase III subunits gamma and tau domain III E2544_17190 PF02223 Thymidylate kinase E2544_17195 PF02618 YceG-like family E2544_17200 PF01571 Aminomethyltransferase folate-binding domain E2544_17215 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase E2544_17215 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase E2544_17220 PF00378 Enoyl-CoA hydratase/isomerase E2544_17225 PF02770 Acyl-CoA dehydrogenase, middle domain E2544_17225 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E2544_17225 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E2544_17235 PF03364 Polyketide cyclase / dehydrase and lipid transport E2544_17240 PF01668 SmpB protein E2544_17245 PF00072 Response regulator receiver domain E2544_17245 PF00990 Diguanylate cyclase, GGDEF domain E2544_17250 PF01145 SPFH domain / Band 7 family E2544_17250 PF16200 C-terminal region of band_7 E2544_17260 PF00117 Glutamine amidotransferase class-I E2544_17260 PF00958 GMP synthase C terminal domain E2544_17265 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain E2544_17265 PF02805 Metal binding domain of Ada E2544_17265 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain E2544_17265 PF12833 Helix-turn-helix domain E2544_17270 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain E2544_17270 PF02896 PEP-utilising enzyme, TIM barrel domain E2544_17270 PF00391 PEP-utilising enzyme, mobile domain E2544_17275 PF03618 Kinase/pyrophosphorylase E2544_17285 PF00588 SpoU rRNA Methylase family E2544_17285 PF08032 RNA 2'-O ribose methyltransferase substrate binding E2544_17290 PF01351 Ribonuclease HII E2544_17295 PF02684 Lipid-A-disaccharide synthetase E2544_17300 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 E2544_17300 PF00132 Bacterial transferase hexapeptide (six repeats) E2544_17305 PF07977 FabA-like domain E2544_17310 PF14602 Hexapeptide repeat of succinyl-transferase E2544_17310 PF00132 Bacterial transferase hexapeptide (six repeats) E2544_17310 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD E2544_17315 PF03938 Outer membrane protein (OmpH-like) E2544_17320 PF01103 Surface antigen E2544_17320 PF07244 Surface antigen variable number repeat E2544_17325 PF17820 PDZ domain E2544_17325 PF02163 Peptidase family M50 E2544_17330 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain E2544_17330 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase E2544_17330 PF13288 DXP reductoisomerase C-terminal domain E2544_17340 PF01255 Putative undecaprenyl diphosphate synthase E2544_17345 PF01765 Ribosome recycling factor E2544_17350 PF00696 Amino acid kinase family E2544_17355 PF00889 Elongation factor TS E2544_17360 PF00318 Ribosomal protein S2 E2544_17365 PF00557 Metallopeptidase family M24 E2544_17370 PF08335 GlnD PII-uridylyltransferase E2544_17370 PF01909 Nucleotidyltransferase domain E2544_17370 PF01966 HD domain E2544_17380 PF02600 Disulfide bond formation protein DsbB E2544_17385 PF01863 Protein of unknown function DUF45 E2544_17390 PF00156 Phosphoribosyl transferase domain E2544_17395 PF02674 Colicin V production protein E2544_17405 PF08245 Mur ligase middle domain E2544_17405 PF02875 Mur ligase family, glutamate ligase domain E2544_17415 PF03401 Tripartite tricarboxylate transporter family receptor E2544_17420 PF02515 CoA-transferase family III E2544_17425 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E2544_17425 PF02770 Acyl-CoA dehydrogenase, middle domain E2544_17425 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E2544_17435 PF03646 FlaG protein E2544_17445 PF02561 Flagellar protein FliS E2544_17460 PF01312 FlhB HrpN YscU SpaS Family E2544_17470 PF02049 Flagellar hook-basal body complex protein FliE E2544_17475 PF01514 Secretory protein of YscJ/FliF family E2544_17475 PF08345 Flagellar M-ring protein C-terminal E2544_17480 PF01706 FliG C-terminal domain E2544_17480 PF14842 FliG N-terminal domain E2544_17480 PF14841 FliG middle domain E2544_17490 PF18269 T3SS EscN ATPase C-terminal domain E2544_17490 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E2544_17505 PF03748 Flagellar basal body-associated protein FliL E2544_17510 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term E2544_17510 PF02154 Flagellar motor switch protein FliM E2544_17515 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term E2544_17515 PF16973 Flagellar motor switch protein FliN N-terminal E2544_17520 PF04347 Flagellar biosynthesis protein, FliO E2544_17525 PF00813 FliP family E2544_17530 PF01313 Bacterial export proteins, family 3 E2544_17535 PF01311 Bacterial export proteins, family 1 E2544_17540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E2544_17540 PF08447 PAS fold E2544_17545 PF02203 Tar ligand binding domain homologue E2544_17545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E2544_17545 PF00672 HAMP domain E2544_17555 PF02203 Tar ligand binding domain homologue E2544_17555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E2544_17555 PF00672 HAMP domain E2544_17560 PF02203 Tar ligand binding domain homologue E2544_17560 PF00672 HAMP domain E2544_17560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E2544_17565 PF00669 Bacterial flagellin N-terminal helical region E2544_17570 PF00460 Flagella basal body rod protein E2544_17570 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E2544_17575 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase E2544_17575 PF10135 Rod binding protein E2544_17580 PF02119 Flagellar P-ring protein E2544_17585 PF02107 Flagellar L-ring protein E2544_17590 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E2544_17590 PF00460 Flagella basal body rod protein E2544_17595 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E2544_17595 PF00460 Flagella basal body rod protein E2544_17600 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E2544_17600 PF07559 Flagellar basal body protein FlaE E2544_17600 PF00460 Flagella basal body rod protein E2544_17605 PF13861 FlgD Tudor-like domain E2544_17605 PF03963 Flagellar hook capping protein - N-terminal region E2544_17605 PF13860 FlgD Ig-like domain E2544_17610 PF00460 Flagella basal body rod protein E2544_17610 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E2544_17615 PF00460 Flagella basal body rod protein E2544_17625 PF04316 Anti-sigma-28 factor, FlgM E2544_17635 PF00448 SRP54-type protein, GTPase domain E2544_17640 PF00771 FHIPEP family E2544_17645 PF01312 FlhB HrpN YscU SpaS Family E2544_17650 PF00672 HAMP domain E2544_17650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E2544_17655 PF04344 Chemotaxis phosphatase, CheZ E2544_17660 PF00072 Response regulator receiver domain E2544_17665 PF00072 Response regulator receiver domain E2544_17665 PF01339 CheB methylesterase E2544_17670 PF03705 CheR methyltransferase, all-alpha domain E2544_17670 PF01739 CheR methyltransferase, SAM binding domain E2544_17675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E2544_17675 PF02203 Tar ligand binding domain homologue E2544_17675 PF00672 HAMP domain E2544_17680 PF01584 CheW-like domain E2544_17685 PF01584 CheW-like domain E2544_17685 PF01627 Hpt domain E2544_17685 PF02895 Signal transducing histidine kinase, homodimeric domain E2544_17685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2544_17685 PF09078 CheY binding E2544_17690 PF00072 Response regulator receiver domain E2544_17695 PF00691 OmpA family E2544_17695 PF13677 Membrane MotB of proton-channel complex MotA/MotB E2544_17700 PF01618 MotA/TolQ/ExbB proton channel family E2544_17705 PF05280 Flagellar transcriptional activator (FlhC) E2544_17710 PF05247 Flagellar transcriptional activator (FlhD) E2544_17715 PF04545 Sigma-70, region 4 E2544_17715 PF04539 Sigma-70 region 3 E2544_17715 PF04542 Sigma-70 region 2 E2544_17720 PF00669 Bacterial flagellin N-terminal helical region E2544_17720 PF00700 Bacterial flagellin C-terminal helical region E2544_17735 PF13847 Methyltransferase domain E2544_17735 PF10119 Predicted methyltransferase regulatory domain E2544_17755 PF17761 DUF1016 N-terminal domain E2544_17755 PF06250 YhcG PDDEXK nuclease domain E2544_17765 PF07992 Pyridine nucleotide-disulphide oxidoreductase E2544_17765 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E2544_17770 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) E2544_17770 PF02817 e3 binding domain E2544_17770 PF00364 Biotin-requiring enzyme E2544_17775 PF00456 Transketolase, thiamine diphosphate binding domain E2544_17775 PF17831 Pyruvate dehydrogenase E1 component middle domain E2544_17780 PF00512 His Kinase A (phospho-acceptor) domain E2544_17780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2544_17780 PF00989 PAS fold E2544_17785 PF00072 Response regulator receiver domain E2544_17785 PF00196 Bacterial regulatory proteins, luxR family E2544_17790 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain E2544_17790 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain E2544_17795 PF01432 Peptidase family M3 E2544_17805 PF02630 SCO1/SenC E2544_17815 PF02321 Outer membrane efflux protein E2544_17820 PF00873 AcrB/AcrD/AcrF family E2544_17825 PF00529 HlyD membrane-fusion protein of T1SS E2544_17825 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E2544_17830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_17830 PF03466 LysR substrate binding domain E2544_17835 PF01479 S4 domain E2544_17835 PF00849 RNA pseudouridylate synthase E2544_17840 PF07171 MlrC C-terminus E2544_17840 PF07364 Metallopeptidase family M81 E2544_17855 PF00005 ABC transporter E2544_17860 PF00005 ABC transporter E2544_17860 PF12399 Branched-chain amino acid ATP-binding cassette transporter E2544_17870 PF00158 Sigma-54 interaction domain E2544_17870 PF02954 Bacterial regulatory protein, Fis family E2544_17870 PF13188 PAS domain E2544_17875 PF00795 Carbon-nitrogen hydrolase E2544_17880 PF04345 Chorismate lyase E2544_17895 PF00857 Isochorismatase family E2544_17900 PF01968 Hydantoinase/oxoprolinase E2544_17900 PF05378 Hydantoinase/oxoprolinase N-terminal region E2544_17905 PF02538 Hydantoinase B/oxoprolinase E2544_17910 PF00694 Aconitase C-terminal domain E2544_17915 PF00330 Aconitase family (aconitate hydratase) E2544_17920 PF00005 ABC transporter E2544_17925 PF00005 ABC transporter E2544_17925 PF12399 Branched-chain amino acid ATP-binding cassette transporter E2544_17930 PF02653 Branched-chain amino acid transport system / permease component E2544_17930 PF11862 Domain of unknown function (DUF3382) E2544_17935 PF02653 Branched-chain amino acid transport system / permease component E2544_17940 PF13458 Periplasmic binding protein E2544_17945 PF07702 UTRA domain E2544_17945 PF00392 Bacterial regulatory proteins, gntR family E2544_17950 PF00072 Response regulator receiver domain E2544_17950 PF00990 Diguanylate cyclase, GGDEF domain E2544_17970 PF07152 YaeQ protein E2544_17975 PF01810 LysE type translocator E2544_17980 PF00005 ABC transporter E2544_17980 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E2544_17990 PF00528 Binding-protein-dependent transport system inner membrane component E2544_17995 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E2544_18005 PF03466 LysR substrate binding domain E2544_18005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_18010 PF05506 Domain of unknown function (DUF756) E2544_18010 PF04185 Phosphoesterase family E2544_18035 PF07963 Prokaryotic N-terminal methylation motif E2544_18035 PF08334 Type II secretion system (T2SS), protein G E2544_18045 PF07963 Prokaryotic N-terminal methylation motif E2544_18045 PF02501 Type II secretion system (T2SS), protein I E2544_18050 PF11612 Type II secretion system (T2SS), protein J E2544_18050 PF07963 Prokaryotic N-terminal methylation motif E2544_18055 PF03934 Type II secretion system (T2SS), protein K E2544_18080 PF00437 Type II/IV secretion system protein E2544_18085 PF03958 Bacterial type II/III secretion system short domain E2544_18085 PF00263 Bacterial type II and III secretion system protein E2544_18090 PF00482 Type II secretion system (T2SS), protein F E2544_18095 PF00543 Nitrogen regulatory protein P-II E2544_18100 PF02540 NAD synthase E2544_18100 PF00795 Carbon-nitrogen hydrolase E2544_18105 PF00924 Mechanosensitive ion channel E2544_18110 PF14698 Argininosuccinate lyase C-terminal E2544_18110 PF00206 Lyase E2544_18120 PF03466 LysR substrate binding domain E2544_18120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_18125 PF07690 Major Facilitator Superfamily E2544_18135 PF01494 FAD binding domain E2544_18160 PF13417 Glutathione S-transferase, N-terminal domain E2544_18165 PF07690 Major Facilitator Superfamily E2544_18165 PF00083 Sugar (and other) transporter E2544_18175 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase E2544_18180 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase E2544_18190 PF03401 Tripartite tricarboxylate transporter family receptor E2544_18195 PF01425 Amidase E2544_18200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_18200 PF03466 LysR substrate binding domain E2544_18205 PF07992 Pyridine nucleotide-disulphide oxidoreductase E2544_18205 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E2544_18210 PF00364 Biotin-requiring enzyme E2544_18210 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) E2544_18210 PF02817 e3 binding domain E2544_18215 PF02779 Transketolase, pyrimidine binding domain E2544_18215 PF02780 Transketolase, C-terminal domain E2544_18220 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal E2544_18220 PF00676 Dehydrogenase E1 component E2544_18235 PF03401 Tripartite tricarboxylate transporter family receptor E2544_18240 PF00378 Enoyl-CoA hydratase/isomerase E2544_18245 PF07729 FCD domain E2544_18245 PF00392 Bacterial regulatory proteins, gntR family E2544_18250 PF02515 CoA-transferase family III E2544_18255 PF13411 MerR HTH family regulatory protein E2544_18265 PF00403 Heavy-metal-associated domain E2544_18270 PF13302 Acetyltransferase (GNAT) domain E2544_18280 PF00672 HAMP domain E2544_18280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E2544_18280 PF02203 Tar ligand binding domain homologue E2544_18285 PF03466 LysR substrate binding domain E2544_18285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_18290 PF07690 Major Facilitator Superfamily E2544_18305 PF00677 Lumazine binding domain E2544_18310 PF00171 Aldehyde dehydrogenase family E2544_18315 PF07729 FCD domain E2544_18315 PF00392 Bacterial regulatory proteins, gntR family E2544_18355 PF03466 LysR substrate binding domain E2544_18355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_18365 PF02803 Thiolase, C-terminal domain E2544_18365 PF00108 Thiolase, N-terminal domain E2544_18370 PF13193 AMP-binding enzyme C-terminal domain E2544_18370 PF00501 AMP-binding enzyme E2544_18400 PF01914 MarC family integral membrane protein E2544_18410 PF07690 Major Facilitator Superfamily E2544_18415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_18415 PF03466 LysR substrate binding domain E2544_18430 PF02653 Branched-chain amino acid transport system / permease component E2544_18435 PF02653 Branched-chain amino acid transport system / permease component E2544_18440 PF00005 ABC transporter E2544_18440 PF12399 Branched-chain amino acid ATP-binding cassette transporter E2544_18445 PF00005 ABC transporter E2544_18450 PF02803 Thiolase, C-terminal domain E2544_18450 PF00108 Thiolase, N-terminal domain E2544_18455 PF13193 AMP-binding enzyme C-terminal domain E2544_18455 PF00501 AMP-binding enzyme E2544_18465 PF03466 LysR substrate binding domain E2544_18465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_18470 PF00005 ABC transporter E2544_18470 PF00664 ABC transporter transmembrane region E2544_18475 PF01804 Penicillin amidase E2544_18480 PF03466 LysR substrate binding domain E2544_18480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_18485 PF08281 Sigma-70, region 4 E2544_18485 PF04542 Sigma-70 region 2 E2544_18490 PF04773 FecR protein E2544_18490 PF16220 Domain of unknown function (DUF4880) E2544_18495 PF07715 TonB-dependent Receptor Plug Domain E2544_18495 PF07660 Secretin and TonB N terminus short domain E2544_18495 PF00593 TonB dependent receptor E2544_18500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_18500 PF03466 LysR substrate binding domain E2544_18510 PF07992 Pyridine nucleotide-disulphide oxidoreductase E2544_18510 PF00724 NADH:flavin oxidoreductase / NADH oxidase family E2544_18515 PF08240 Alcohol dehydrogenase GroES-like domain E2544_18515 PF00107 Zinc-binding dehydrogenase E2544_18535 PF00583 Acetyltransferase (GNAT) family E2544_18545 PF00005 ABC transporter E2544_18550 PF12399 Branched-chain amino acid ATP-binding cassette transporter E2544_18550 PF00005 ABC transporter E2544_18570 PF00171 Aldehyde dehydrogenase family E2544_18585 PF07729 FCD domain E2544_18585 PF00392 Bacterial regulatory proteins, gntR family E2544_18590 PF00664 ABC transporter transmembrane region E2544_18590 PF00005 ABC transporter E2544_18595 PF01810 LysE type translocator E2544_18600 PF01037 Lrp/AsnC ligand binding domain E2544_18605 PF01965 DJ-1/PfpI family E2544_18610 PF12833 Helix-turn-helix domain E2544_18625 PF03401 Tripartite tricarboxylate transporter family receptor E2544_18635 PF13193 AMP-binding enzyme C-terminal domain E2544_18635 PF00501 AMP-binding enzyme E2544_18640 PF07702 UTRA domain E2544_18640 PF00392 Bacterial regulatory proteins, gntR family E2544_18650 PF07687 Peptidase dimerisation domain E2544_18650 PF01546 Peptidase family M20/M25/M40 E2544_18655 PF01979 Amidohydrolase family E2544_18660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_18660 PF03466 LysR substrate binding domain E2544_18665 PF07690 Major Facilitator Superfamily E2544_18670 PF01323 DSBA-like thioredoxin domain E2544_18675 PF07690 Major Facilitator Superfamily E2544_18675 PF00083 Sugar (and other) transporter E2544_18680 PF00596 Class II Aldolase and Adducin N-terminal domain E2544_18695 PF05974 Domain of unknown function (DUF892) E2544_18705 PF05067 Manganese containing catalase E2544_18720 PF03466 LysR substrate binding domain E2544_18720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_18725 PF00083 Sugar (and other) transporter E2544_18725 PF07690 Major Facilitator Superfamily E2544_18730 PF07687 Peptidase dimerisation domain E2544_18730 PF01546 Peptidase family M20/M25/M40 E2544_18755 PF00106 short chain dehydrogenase E2544_18760 PF13460 NAD(P)H-binding E2544_18760 PF11066 Protein of unknown function (DUF2867) E2544_18775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_18775 PF03466 LysR substrate binding domain E2544_18785 PF00378 Enoyl-CoA hydratase/isomerase E2544_18790 PF00990 Diguanylate cyclase, GGDEF domain E2544_18790 PF00563 EAL domain E2544_18790 PF13426 PAS domain E2544_18795 PF03401 Tripartite tricarboxylate transporter family receptor E2544_18800 PF00920 Dehydratase family E2544_18815 PF01209 ubiE/COQ5 methyltransferase family E2544_18825 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component E2544_18835 PF00528 Binding-protein-dependent transport system inner membrane component E2544_18840 PF00005 ABC transporter E2544_18850 PF00111 2Fe-2S iron-sulfur cluster binding domain E2544_18850 PF01799 [2Fe-2S] binding domain E2544_18855 PF00941 FAD binding domain in molybdopterin dehydrogenase E2544_18855 PF03450 CO dehydrogenase flavoprotein C-terminal domain E2544_18860 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase E2544_18860 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain E2544_18865 PF03480 Bacterial extracellular solute-binding protein, family 7 E2544_18870 PF00355 Rieske [2Fe-2S] domain E2544_18875 PF14759 Reductase C-terminal E2544_18875 PF07992 Pyridine nucleotide-disulphide oxidoreductase E2544_18880 PF00355 Rieske [2Fe-2S] domain E2544_18880 PF00848 Ring hydroxylating alpha subunit (catalytic domain) E2544_18885 PF00866 Ring hydroxylating beta subunit E2544_18890 PF00857 Isochorismatase family E2544_18900 PF00561 alpha/beta hydrolase fold E2544_18920 PF01047 MarR family E2544_18925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_18925 PF03466 LysR substrate binding domain E2544_18930 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain E2544_18930 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain E2544_18930 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain E2544_18935 PF05853 beta-keto acid cleavage enzyme E2544_18950 PF00384 Molybdopterin oxidoreductase E2544_18950 PF04879 Molybdopterin oxidoreductase Fe4S4 domain E2544_18950 PF01568 Molydopterin dinucleotide binding domain E2544_18955 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) E2544_18960 PF03264 NapC/NirT cytochrome c family, N-terminal region E2544_18965 PF00005 ABC transporter E2544_18970 PF03379 CcmB protein E2544_18975 PF01578 Cytochrome C assembly protein E2544_18985 PF03100 CcmE E2544_18990 PF01578 Cytochrome C assembly protein E2544_18990 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal E2544_18995 PF08534 Redoxin E2544_19000 PF03918 Cytochrome C biogenesis protein E2544_19010 PF00384 Molybdopterin oxidoreductase E2544_19010 PF04879 Molybdopterin oxidoreductase Fe4S4 domain E2544_19010 PF01568 Molydopterin dinucleotide binding domain E2544_19015 PF03916 Polysulphide reductase, NrfD E2544_19020 PF13247 4Fe-4S dicluster domain E2544_19030 PF02678 Pirin E2544_19030 PF05726 Pirin C-terminal cupin domain E2544_19055 PF07690 Major Facilitator Superfamily E2544_19060 PF03466 LysR substrate binding domain E2544_19060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_19085 PF01613 Flavin reductase like domain E2544_19100 PF03466 LysR substrate binding domain E2544_19100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_19105 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase E2544_19105 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase E2544_19110 PF03401 Tripartite tricarboxylate transporter family receptor E2544_19120 PF00392 Bacterial regulatory proteins, gntR family E2544_19120 PF07729 FCD domain E2544_19125 PF01425 Amidase E2544_19135 PF02653 Branched-chain amino acid transport system / permease component E2544_19140 PF02653 Branched-chain amino acid transport system / permease component E2544_19140 PF11862 Domain of unknown function (DUF3382) E2544_19145 PF00005 ABC transporter E2544_19145 PF12399 Branched-chain amino acid ATP-binding cassette transporter E2544_19150 PF00005 ABC transporter E2544_19155 PF04115 Ureidoglycolate lyase E2544_19165 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain E2544_19165 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain E2544_19170 PF13193 AMP-binding enzyme C-terminal domain E2544_19170 PF00501 AMP-binding enzyme E2544_19185 PF00378 Enoyl-CoA hydratase/isomerase E2544_19190 PF01546 Peptidase family M20/M25/M40 E2544_19190 PF07687 Peptidase dimerisation domain E2544_19200 PF00892 EamA-like transporter family E2544_19205 PF00892 EamA-like transporter family E2544_19215 PF00155 Aminotransferase class I and II E2544_19215 PF00392 Bacterial regulatory proteins, gntR family E2544_19235 PF01810 LysE type translocator E2544_19245 PF07992 Pyridine nucleotide-disulphide oxidoreductase E2544_19245 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E2544_19255 PF17831 Pyruvate dehydrogenase E1 component middle domain E2544_19255 PF00456 Transketolase, thiamine diphosphate binding domain E2544_19260 PF00115 Cytochrome C and Quinol oxidase polypeptide I E2544_19270 PF01177 Asp/Glu/Hydantoin racemase E2544_19280 PF13193 AMP-binding enzyme C-terminal domain E2544_19280 PF00501 AMP-binding enzyme E2544_19285 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E2544_19285 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E2544_19285 PF12806 Acetyl-CoA dehydrogenase C-terminal like E2544_19285 PF02770 Acyl-CoA dehydrogenase, middle domain E2544_19290 PF07690 Major Facilitator Superfamily E2544_19295 PF01638 HxlR-like helix-turn-helix E2544_19305 PF02798 Glutathione S-transferase, N-terminal domain E2544_19310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_19310 PF03466 LysR substrate binding domain E2544_19315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_19315 PF03466 LysR substrate binding domain E2544_19330 PF01619 Proline dehydrogenase E2544_19335 PF00892 EamA-like transporter family E2544_19340 PF01266 FAD dependent oxidoreductase E2544_19345 PF02082 Transcriptional regulator E2544_19350 PF00175 Oxidoreductase NAD-binding domain E2544_19350 PF00042 Globin E2544_19350 PF00970 Oxidoreductase FAD-binding domain E2544_19355 PF09424 Yqey-like protein E2544_19360 PF11798 IMS family HHH motif E2544_19360 PF00817 impB/mucB/samB family E2544_19360 PF11799 impB/mucB/samB family C-terminal domain E2544_19375 PF09339 IclR helix-turn-helix domain E2544_19385 PF03401 Tripartite tricarboxylate transporter family receptor E2544_19390 PF00326 Prolyl oligopeptidase family E2544_19395 PF00990 Diguanylate cyclase, GGDEF domain E2544_19395 PF03707 Bacterial signalling protein N terminal repeat E2544_19395 PF00563 EAL domain E2544_19405 PF14883 Hypothetical glycosyl hydrolase family 13 E2544_19405 PF01522 Polysaccharide deacetylase E2544_19410 PF00535 Glycosyl transferase family 2 E2544_19420 PF07690 Major Facilitator Superfamily E2544_19425 PF02311 AraC-like ligand binding domain E2544_19425 PF12833 Helix-turn-helix domain E2544_19430 PF17092 Penicillin-binding protein OB-like domain E2544_19430 PF00912 Transglycosylase E2544_19430 PF00905 Penicillin binding protein transpeptidase domain E2544_19435 PF00149 Calcineurin-like phosphoesterase E2544_19450 PF00248 Aldo/keto reductase family E2544_19455 PF00005 ABC transporter E2544_19455 PF00664 ABC transporter transmembrane region E2544_19465 PF13593 SBF-like CPA transporter family (DUF4137) E2544_19470 PF03466 LysR substrate binding domain E2544_19470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_19495 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain E2544_19495 PF02142 MGS-like domain E2544_19495 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain E2544_19510 PF03401 Tripartite tricarboxylate transporter family receptor E2544_19515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_19515 PF03466 LysR substrate binding domain E2544_19550 PF01037 Lrp/AsnC ligand binding domain E2544_19575 PF03401 Tripartite tricarboxylate transporter family receptor E2544_19585 PF00583 Acetyltransferase (GNAT) family E2544_19590 PF02567 Phenazine biosynthesis-like protein E2544_19605 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E2544_19605 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E2544_19610 PF03466 LysR substrate binding domain E2544_19610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_19615 PF00920 Dehydratase family E2544_19620 PF03401 Tripartite tricarboxylate transporter family receptor E2544_19625 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain E2544_19625 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain E2544_19640 PF01694 Rhomboid family E2544_19650 PF02469 Fasciclin domain E2544_19655 PF13411 MerR HTH family regulatory protein E2544_19685 PF00216 Bacterial DNA-binding protein E2544_19690 PF01588 Putative tRNA binding domain E2544_19690 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain E2544_19690 PF03483 B3/4 domain E2544_19690 PF03484 tRNA synthetase B5 domain E2544_19690 PF03147 Ferredoxin-fold anticodon binding domain E2544_19695 PF01409 tRNA synthetases class II core domain (F) E2544_19695 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain E2544_19700 PF00453 Ribosomal protein L20 E2544_19705 PF01632 Ribosomal protein L35 E2544_19710 PF01078 Magnesium chelatase, subunit ChlI E2544_19710 PF13335 Magnesium chelatase, subunit ChlI C-terminal E2544_19715 PF04380 Membrane fusogenic activity E2544_19725 PF00543 Nitrogen regulatory protein P-II E2544_19730 PF00909 Ammonium Transporter Family E2544_19735 PF05524 PEP-utilising enzyme, N-terminal E2544_19735 PF02896 PEP-utilising enzyme, TIM barrel domain E2544_19735 PF00391 PEP-utilising enzyme, mobile domain E2544_19740 PF00381 PTS HPr component phosphorylation site E2544_19750 PF02951 Prokaryotic glutathione synthetase, N-terminal domain E2544_19750 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain E2544_19755 PF00707 Translation initiation factor IF-3, C-terminal domain E2544_19755 PF05198 Translation initiation factor IF-3, N-terminal domain E2544_19760 PF03129 Anticodon binding domain E2544_19760 PF02824 TGS domain E2544_19760 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain E2544_19760 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E2544_19770 PF04055 Radical SAM superfamily E2544_19770 PF06969 HemN C-terminal domain E2544_19785 PF07729 FCD domain E2544_19785 PF00392 Bacterial regulatory proteins, gntR family E2544_19790 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E2544_19795 PF00528 Binding-protein-dependent transport system inner membrane component E2544_19800 PF12911 N-terminal TM domain of oligopeptide transport permease C E2544_19800 PF00528 Binding-protein-dependent transport system inner membrane component E2544_19805 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E2544_19805 PF00005 ABC transporter E2544_19810 PF07883 Cupin domain E2544_19815 PF00850 Histone deacetylase domain E2544_19825 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family E2544_19825 PF00356 Bacterial regulatory proteins, lacI family E2544_19830 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component E2544_19835 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component E2544_19840 PF03480 Bacterial extracellular solute-binding protein, family 7 E2544_19845 PF00920 Dehydratase family E2544_19855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E2544_19855 PF00672 HAMP domain E2544_19855 PF02203 Tar ligand binding domain homologue E2544_19865 PF13185 GAF domain E2544_19865 PF00990 Diguanylate cyclase, GGDEF domain E2544_19875 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase E2544_19880 PF03480 Bacterial extracellular solute-binding protein, family 7 E2544_19885 PF01416 tRNA pseudouridine synthase E2544_19895 PF02774 Semialdehyde dehydrogenase, dimerisation domain E2544_19895 PF01118 Semialdehyde dehydrogenase, NAD binding domain E2544_19900 PF00180 Isocitrate/isopropylmalate dehydrogenase E2544_19905 PF00694 Aconitase C-terminal domain E2544_19910 PF00330 Aconitase family (aconitate hydratase) E2544_19915 PF02321 Outer membrane efflux protein E2544_19925 PF00005 ABC transporter E2544_19925 PF03412 Peptidase C39 family E2544_19925 PF00664 ABC transporter transmembrane region E2544_19930 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E2544_19930 PF00529 HlyD membrane-fusion protein of T1SS E2544_19935 PF00196 Bacterial regulatory proteins, luxR family E2544_19935 PF00072 Response regulator receiver domain E2544_19955 PF01435 Peptidase family M48 E2544_19960 PF01264 Chorismate synthase E2544_19965 PF00563 EAL domain E2544_19965 PF00990 Diguanylate cyclase, GGDEF domain E2544_19965 PF03707 Bacterial signalling protein N terminal repeat E2544_19975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2544_19975 PF00512 His Kinase A (phospho-acceptor) domain E2544_19980 PF00486 Transcriptional regulatory protein, C terminal E2544_19980 PF00072 Response regulator receiver domain E2544_19985 PF02696 Uncharacterized ACR, YdiU/UPF0061 family E2544_19995 PF03631 Virulence factor BrkB E2544_20005 PF01207 Dihydrouridine synthase (Dus) E2544_20010 PF01636 Phosphotransferase enzyme family E2544_20035 PF00437 Type II/IV secretion system protein E2544_20040 PF04972 BON domain E2544_20040 PF00263 Bacterial type II and III secretion system protein E2544_20040 PF13629 Pilus formation protein N terminal region E2544_20085 PF03466 LysR substrate binding domain E2544_20085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_20100 PF09411 Lipid A 3-O-deacylase (PagL) E2544_20135 PF04466 Phage terminase large subunit E2544_20135 PF17288 Terminase RNAseH like domain E2544_20170 PF00589 Phage integrase family E2544_20180 PF04545 Sigma-70, region 4 E2544_20180 PF04539 Sigma-70 region 3 E2544_20180 PF04542 Sigma-70 region 2 E2544_20180 PF00140 Sigma-70 factor, region 1.2 E2544_20180 PF03979 Sigma-70 factor, region 1.1 E2544_20180 PF04546 Sigma-70, non-essential region E2544_20185 PF10410 DnaB-helicase binding domain of primase E2544_20185 PF08275 DNA primase catalytic core, N-terminal domain E2544_20185 PF01807 CHC2 zinc finger E2544_20185 PF08278 DNA primase DnaG DnaB-binding E2544_20190 PF01165 Ribosomal protein S21 E2544_20195 PF00156 Phosphoribosyl transferase domain E2544_20200 PF00709 Adenylosuccinate synthetase E2544_20205 PF13393 Histidyl-tRNA synthetase E2544_20210 PF01145 SPFH domain / Band 7 family E2544_20215 PF01145 SPFH domain / Band 7 family E2544_20215 PF12221 Bacterial membrane protein N terminal E2544_20220 PF13167 GTP-binding GTPase N-terminal E2544_20220 PF01926 50S ribosome-binding GTPase E2544_20220 PF16360 GTP-binding GTPase Middle Region E2544_20225 PF17209 Hfq protein E2544_20230 PF00155 Aminotransferase class I and II E2544_20235 PF01926 50S ribosome-binding GTPase E2544_20235 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal E2544_20240 PF13360 PQQ-like domain E2544_20245 PF09976 Tetratricopeptide repeat-like domain E2544_20250 PF03129 Anticodon binding domain E2544_20250 PF13393 Histidyl-tRNA synthetase E2544_20255 PF04551 GcpE protein E2544_20265 PF04055 Radical SAM superfamily E2544_20270 PF00334 Nucleoside diphosphate kinase E2544_20275 PF00133 tRNA synthetases class I (I, L, M and V) E2544_20275 PF10458 Valyl tRNA synthetase tRNA binding arm E2544_20275 PF08264 Anticodon-binding domain of tRNA E2544_20280 PF01746 tRNA (Guanine-1)-methyltransferase E2544_20285 PF01782 RimM N-terminal domain E2544_20290 PF00886 Ribosomal protein S16 E2544_20300 PF01206 Sulfurtransferase TusA E2544_20305 PF02272 DHHA1 domain E2544_20305 PF01411 tRNA synthetases class II (A) E2544_20305 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain E2544_20350 PF13416 Bacterial extracellular solute-binding protein E2544_20355 PF01266 FAD dependent oxidoreductase E2544_20360 PF00111 2Fe-2S iron-sulfur cluster binding domain E2544_20360 PF00175 Oxidoreductase NAD-binding domain E2544_20360 PF00970 Oxidoreductase FAD-binding domain E2544_20365 PF02261 Aspartate decarboxylase E2544_20370 PF00893 Small Multidrug Resistance protein E2544_20375 PF03476 MOSC N-terminal beta barrel domain E2544_20375 PF00111 2Fe-2S iron-sulfur cluster binding domain E2544_20375 PF03473 MOSC domain E2544_20380 PF05721 Phytanoyl-CoA dioxygenase (PhyH) E2544_20385 PF06339 Ectoine synthase E2544_20390 PF00202 Aminotransferase class-III E2544_20395 PF00583 Acetyltransferase (GNAT) family E2544_20400 PF12802 MarR family E2544_20410 PF00202 Aminotransferase class-III E2544_20415 PF16868 NMT1-like family E2544_20425 PF04235 Protein of unknown function (DUF418) E2544_20435 PF00521 DNA gyrase/topoisomerase IV, subunit A E2544_20445 PF01751 Toprim domain E2544_20445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2544_20445 PF00986 DNA gyrase B subunit, carboxyl terminus E2544_20445 PF00204 DNA gyrase B E2544_20450 PF00085 Thioredoxin E2544_20455 PF07497 Rho termination factor, RNA-binding domain E2544_20455 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E2544_20455 PF07498 Rho termination factor, N-terminal domain E2544_20465 PF03710 Glutamate-ammonia ligase adenylyltransferase E2544_20465 PF08335 GlnD PII-uridylyltransferase E2544_20470 PF02677 Epoxyqueuosine reductase QueH E2544_20475 PF14525 AraC-binding-like domain E2544_20485 PF02975 Methylamine dehydrogenase, L chain E2544_20490 PF00578 AhpC/TSA family E2544_20500 PF06433 Methylamine dehydrogenase heavy chain (MADH) E2544_20510 PF00171 Aldehyde dehydrogenase family E2544_20515 PF08240 Alcohol dehydrogenase GroES-like domain E2544_20515 PF00107 Zinc-binding dehydrogenase E2544_20530 PF01047 MarR family E2544_20535 PF02321 Outer membrane efflux protein E2544_20540 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E2544_20540 PF00529 HlyD membrane-fusion protein of T1SS E2544_20545 PF07690 Major Facilitator Superfamily E2544_20555 PF00180 Isocitrate/isopropylmalate dehydrogenase E2544_20560 PF05872 Bacterial protein of unknown function (DUF853) E2544_20565 PF01709 Transcriptional regulator E2544_20570 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain E2544_20570 PF02843 Phosphoribosylglycinamide synthetase, C domain E2544_20570 PF02844 Phosphoribosylglycinamide synthetase, N domain E2544_20575 PF01218 Coproporphyrinogen III oxidase E2544_20580 PF01467 Cytidylyltransferase-like E2544_20590 PF02590 Predicted SPOUT methyltransferase E2544_20595 PF02545 Maf-like protein E2544_20600 PF00375 Sodium:dicarboxylate symporter family E2544_20605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2544_20605 PF00512 His Kinase A (phospho-acceptor) domain E2544_20605 PF02743 Cache domain E2544_20610 PF00158 Sigma-54 interaction domain E2544_20610 PF00072 Response regulator receiver domain E2544_20610 PF02954 Bacterial regulatory protein, Fis family E2544_20640 PF10150 Ribonuclease E/G family E2544_20640 PF00575 S1 RNA binding domain E2544_20645 PF01370 NAD dependent epimerase/dehydratase family E2544_20650 PF03480 Bacterial extracellular solute-binding protein, family 7 E2544_20655 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component E2544_20665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_20665 PF03466 LysR substrate binding domain E2544_20670 PF11254 Protein of unknown function (DUF3053) E2544_20675 PF01590 GAF domain E2544_20675 PF00563 EAL domain E2544_20675 PF00990 Diguanylate cyclase, GGDEF domain E2544_20675 PF00360 Phytochrome region E2544_20685 PF00999 Sodium/hydrogen exchanger family E2544_20685 PF02254 TrkA-N domain E2544_20690 PF00005 ABC transporter E2544_20690 PF00664 ABC transporter transmembrane region E2544_20705 PF03692 Putative zinc- or iron-chelating domain E2544_20715 PF01522 Polysaccharide deacetylase E2544_20725 PF00535 Glycosyl transferase family 2 E2544_20730 PF01522 Polysaccharide deacetylase E2544_20735 PF00534 Glycosyl transferases group 1 E2544_20740 PF02811 PHP domain E2544_20740 PF01336 OB-fold nucleic acid binding domain E2544_20740 PF14579 Helix-hairpin-helix motif E2544_20740 PF07733 Bacterial DNA polymerase III alpha NTPase domain E2544_20740 PF17657 Bacterial DNA polymerase III alpha subunit finger domain E2544_20750 PF00270 DEAD/DEAH box helicase E2544_20750 PF11898 Domain of unknown function (DUF3418) E2544_20750 PF04408 Helicase associated domain (HA2) E2544_20750 PF00271 Helicase conserved C-terminal domain E2544_20750 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold E2544_20755 PF00696 Amino acid kinase family E2544_20755 PF00583 Acetyltransferase (GNAT) family E2544_20760 PF04362 Bacterial Fe(2+) trafficking E2544_20765 PF04185 Phosphoesterase family E2544_20765 PF05506 Domain of unknown function (DUF756) E2544_20770 PF01895 PhoU domain E2544_20775 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) E2544_20780 PF18158 Adaptive response protein AidB N-terminal domain E2544_20780 PF02770 Acyl-CoA dehydrogenase, middle domain E2544_20780 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E2544_20785 PF01425 Amidase E2544_20790 PF02646 RmuC family E2544_20800 PF02245 Methylpurine-DNA glycosylase (MPG) E2544_20810 PF00528 Binding-protein-dependent transport system inner membrane component E2544_20815 PF00528 Binding-protein-dependent transport system inner membrane component E2544_20820 PF08402 TOBE domain E2544_20820 PF00005 ABC transporter E2544_20825 PF13416 Bacterial extracellular solute-binding protein E2544_20845 PF03480 Bacterial extracellular solute-binding protein, family 7 E2544_20855 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component E2544_20860 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E2544_20860 PF00005 ABC transporter E2544_20865 PF00005 ABC transporter E2544_20865 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E2544_20870 PF01979 Amidohydrolase family E2544_20875 PF01979 Amidohydrolase family E2544_20880 PF12911 N-terminal TM domain of oligopeptide transport permease C E2544_20880 PF00528 Binding-protein-dependent transport system inner membrane component E2544_20890 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E2544_20895 PF01177 Asp/Glu/Hydantoin racemase E2544_20910 PF00202 Aminotransferase class-III E2544_20915 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain E2544_20915 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain E2544_20935 PF04909 Amidohydrolase E2544_20940 PF03466 LysR substrate binding domain E2544_20940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_20945 PF00764 Arginosuccinate synthase E2544_20950 PF02705 K+ potassium transporter E2544_20955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2544_20955 PF00512 His Kinase A (phospho-acceptor) domain E2544_20955 PF08521 Two-component sensor kinase N-terminal E2544_20960 PF00072 Response regulator receiver domain E2544_20960 PF00486 Transcriptional regulatory protein, C terminal E2544_20965 PF02472 Biopolymer transport protein ExbD/TolR E2544_20970 PF01618 MotA/TolQ/ExbB proton channel family E2544_20985 PF00216 Bacterial DNA-binding protein E2544_20990 PF18331 PKHD-type hydroxylase C-terminal domain E2544_20990 PF13640 2OG-Fe(II) oxygenase superfamily E2544_20995 PF01053 Cys/Met metabolism PLP-dependent enzyme E2544_21000 PF00588 SpoU rRNA Methylase family E2544_21000 PF08032 RNA 2'-O ribose methyltransferase substrate binding E2544_21005 PF08206 Ribonuclease B OB domain E2544_21005 PF00575 S1 RNA binding domain E2544_21005 PF08461 Ribonuclease R winged-helix domain E2544_21005 PF00773 RNB domain E2544_21005 PF17876 Cold shock domain E2544_21025 PF13673 Acetyltransferase (GNAT) domain E2544_21040 PF02040 Arsenical pump membrane protein E2544_21045 PF04143 Sulphur transport E2544_21050 PF01645 Conserved region in glutamate synthase E2544_21055 PF13396 Phospholipase_D-nuclease N-terminal E2544_21055 PF13091 PLD-like domain E2544_21100 PF00892 EamA-like transporter family E2544_21110 PF00563 EAL domain E2544_21110 PF00990 Diguanylate cyclase, GGDEF domain E2544_21110 PF03707 Bacterial signalling protein N terminal repeat E2544_21120 PF01594 AI-2E family transporter E2544_21130 PF00583 Acetyltransferase (GNAT) family E2544_21150 PF07690 Major Facilitator Superfamily E2544_21160 PF01322 Cytochrome C' E2544_21165 PF08328 Adenylosuccinate lyase C-terminal E2544_21165 PF00206 Lyase E2544_21170 PF13417 Glutathione S-transferase, N-terminal domain E2544_21170 PF00043 Glutathione S-transferase, C-terminal domain E2544_21175 PF01925 Sulfite exporter TauE/SafE E2544_21185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_21185 PF03466 LysR substrate binding domain E2544_21190 PF03401 Tripartite tricarboxylate transporter family receptor E2544_21200 PF05222 Alanine dehydrogenase/PNT, N-terminal domain E2544_21200 PF01262 Alanine dehydrogenase/PNT, C-terminal domain E2544_21205 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch E2544_21210 PF02233 NAD(P) transhydrogenase beta subunit E2544_21215 PF13183 4Fe-4S dicluster domain E2544_21215 PF02754 Cysteine-rich domain E2544_21220 PF01565 FAD binding domain E2544_21225 PF02913 FAD linked oxidases, C-terminal domain E2544_21225 PF01565 FAD binding domain E2544_21230 PF02913 FAD linked oxidases, C-terminal domain E2544_21230 PF01565 FAD binding domain E2544_21235 PF00793 DAHP synthetase I family E2544_21240 PF01523 Putative modulator of DNA gyrase E2544_21245 PF00816 H-NS histone family E2544_21255 PF17432 Domain of unknown function (DUF3458_C) ARM repeats E2544_21255 PF11940 Domain of unknown function (DUF3458) Ig-like fold E2544_21255 PF01433 Peptidase family M1 domain E2544_21260 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain E2544_21270 PF14821 Threonine synthase N terminus E2544_21270 PF00291 Pyridoxal-phosphate dependent enzyme E2544_21275 PF01842 ACT domain E2544_21275 PF03447 Homoserine dehydrogenase, NAD binding domain E2544_21275 PF00742 Homoserine dehydrogenase E2544_21280 PF00155 Aminotransferase class I and II E2544_21290 PF00578 AhpC/TSA family E2544_21295 PF02562 PhoH-like protein E2544_21295 PF13638 PIN domain E2544_21305 PF01557 Fumarylacetoacetate (FAA) hydrolase family E2544_21315 PF02653 Branched-chain amino acid transport system / permease component E2544_21320 PF00005 ABC transporter E2544_21325 PF00005 ABC transporter E2544_21325 PF12399 Branched-chain amino acid ATP-binding cassette transporter E2544_21330 PF00106 short chain dehydrogenase E2544_21355 PF00719 Inorganic pyrophosphatase E2544_21375 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain E2544_21375 PF03900 Porphobilinogen deaminase, C-terminal domain E2544_21380 PF03741 Integral membrane protein TerC family E2544_21385 PF03741 Integral membrane protein TerC family E2544_21390 PF00549 CoA-ligase E2544_21390 PF02629 CoA binding domain E2544_21395 PF00549 CoA-ligase E2544_21395 PF08442 ATP-grasp domain E2544_21405 PF13193 AMP-binding enzyme C-terminal domain E2544_21405 PF00668 Condensation domain E2544_21405 PF00550 Phosphopantetheine attachment site E2544_21405 PF00501 AMP-binding enzyme E2544_21410 PF08267 Cobalamin-independent synthase, N-terminal domain E2544_21410 PF01717 Cobalamin-independent synthase, Catalytic domain E2544_21415 PF03466 LysR substrate binding domain E2544_21415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_21420 PF02631 RecX family E2544_21425 PF00154 recA bacterial DNA recombination protein E2544_21430 PF00072 Response regulator receiver domain E2544_21430 PF00486 Transcriptional regulatory protein, C terminal E2544_21435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2544_21435 PF08521 Two-component sensor kinase N-terminal E2544_21435 PF00512 His Kinase A (phospho-acceptor) domain E2544_21440 PF00083 Sugar (and other) transporter E2544_21440 PF08946 Osmosensory transporter coiled coil E2544_21450 PF04381 Putative exonuclease, RdgC E2544_21455 PF00990 Diguanylate cyclase, GGDEF domain E2544_21460 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain E2544_21460 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain E2544_21510 PF00155 Aminotransferase class I and II E2544_21510 PF00392 Bacterial regulatory proteins, gntR family E2544_21535 PF01037 Lrp/AsnC ligand binding domain E2544_21535 PF13404 AsnC-type helix-turn-helix domain E2544_21545 PF04166 Pyridoxal phosphate biosynthetic protein PdxA E2544_21550 PF13593 SBF-like CPA transporter family (DUF4137) E2544_21555 PF00772 DnaB-like helicase N terminal domain E2544_21555 PF03796 DnaB-like helicase C terminal domain E2544_21565 PF03948 Ribosomal protein L9, C-terminal domain E2544_21565 PF01281 Ribosomal protein L9, N-terminal domain E2544_21570 PF01084 Ribosomal protein S18 E2544_21580 PF01250 Ribosomal protein S6 E2544_21585 PF05675 Protein of unknown function (DUF817) E2544_21590 PF02649 Type I GTP cyclohydrolase folE2 E2544_21595 PF02780 Transketolase, C-terminal domain E2544_21595 PF02779 Transketolase, pyrimidine binding domain E2544_21595 PF13292 1-deoxy-D-xylulose-5-phosphate synthase E2544_21600 PF00348 Polyprenyl synthetase E2544_21605 PF02609 Exonuclease VII small subunit E2544_21615 PF03401 Tripartite tricarboxylate transporter family receptor E2544_21630 PF01266 FAD dependent oxidoreductase E2544_21640 PF13419 Haloacid dehalogenase-like hydrolase E2544_21650 PF00005 ABC transporter E2544_21650 PF08402 TOBE domain E2544_21655 PF03466 LysR substrate binding domain E2544_21655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_21665 PF07690 Major Facilitator Superfamily E2544_21670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_21670 PF03466 LysR substrate binding domain E2544_21675 PF00581 Rhodanese-like domain E2544_21685 PF01435 Peptidase family M48 E2544_21690 PF03313 Serine dehydratase alpha chain E2544_21690 PF03315 Serine dehydratase beta chain E2544_21695 PF02690 Na+/Pi-cotransporter E2544_21700 PF01738 Dienelactone hydrolase family E2544_21705 PF02535 ZIP Zinc transporter E2544_21710 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain E2544_21710 PF01367 5'-3' exonuclease, C-terminal SAM fold E2544_21710 PF00476 DNA polymerase family A E2544_21710 PF01612 3'-5' exonuclease E2544_21715 PF03641 Possible lysine decarboxylase E2544_21720 PF01546 Peptidase family M20/M25/M40 E2544_21725 PF03401 Tripartite tricarboxylate transporter family receptor E2544_21730 PF03466 LysR substrate binding domain E2544_21730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_21735 PF00106 short chain dehydrogenase E2544_21740 PF07690 Major Facilitator Superfamily E2544_21745 PF00775 Dioxygenase E2544_21745 PF04444 Catechol dioxygenase N terminus E2544_21750 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain E2544_21750 PF13378 Enolase C-terminal domain-like E2544_21755 PF03466 LysR substrate binding domain E2544_21755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_21760 PF03466 LysR substrate binding domain E2544_21760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_21775 PF16198 tRNA pseudouridylate synthase B C-terminal domain E2544_21775 PF01509 TruB family pseudouridylate synthase (N terminal domain) E2544_21780 PF02033 Ribosome-binding factor A E2544_21785 PF11987 Translation-initiation factor 2 E2544_21785 PF04760 Translation initiation factor IF-2, N-terminal region E2544_21785 PF08364 Bacterial translation initiation factor IF-2 associated region E2544_21785 PF00009 Elongation factor Tu GTP binding domain E2544_21790 PF08529 NusA N-terminal domain E2544_21790 PF13184 NusA-like KH domain E2544_21795 PF02576 RimP N-terminal domain E2544_21795 PF17384 RimP C-terminal SH3 domain E2544_21800 PF01479 S4 domain E2544_21800 PF00849 RNA pseudouridylate synthase E2544_21805 PF04079 Segregation and condensation complex subunit ScpB E2544_21815 PF03466 LysR substrate binding domain E2544_21815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_21820 PF02492 CobW/HypB/UreG, nucleotide-binding domain E2544_21820 PF07683 Cobalamin synthesis protein cobW C-terminal domain E2544_21835 PF00072 Response regulator receiver domain E2544_21835 PF00486 Transcriptional regulatory protein, C terminal E2544_21840 PF00512 His Kinase A (phospho-acceptor) domain E2544_21840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2544_21840 PF08521 Two-component sensor kinase N-terminal E2544_21845 PF13180 PDZ domain E2544_21845 PF17820 PDZ domain E2544_21850 PF02798 Glutathione S-transferase, N-terminal domain E2544_21850 PF14497 Glutathione S-transferase, C-terminal domain E2544_21855 PF02401 LytB protein E2544_21860 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E2544_21865 PF04002 RadC-like JAB domain E2544_21870 PF04199 Putative cyclase E2544_21875 PF03301 Tryptophan 2,3-dioxygenase E2544_21880 PF01197 Ribosomal protein L31 E2544_21890 PF01554 MatE E2544_21900 PF03061 Thioesterase superfamily E2544_21905 PF00378 Enoyl-CoA hydratase/isomerase E2544_21910 PF00171 Aldehyde dehydrogenase family E2544_21915 PF00970 Oxidoreductase FAD-binding domain E2544_21915 PF00111 2Fe-2S iron-sulfur cluster binding domain E2544_21915 PF00175 Oxidoreductase NAD-binding domain E2544_21920 PF01883 Iron-sulfur cluster assembly protein E2544_21925 PF05138 Phenylacetic acid catabolic protein E2544_21930 PF06243 Phenylacetic acid degradation B E2544_21935 PF05138 Phenylacetic acid catabolic protein E2544_21940 PF07848 PaaX-like protein E2544_21940 PF08223 PaaX-like protein C-terminal domain E2544_21945 PF03853 YjeF-related protein N-terminus E2544_21960 PF03401 Tripartite tricarboxylate transporter family receptor E2544_21965 PF00158 Sigma-54 interaction domain E2544_21965 PF00072 Response regulator receiver domain E2544_21965 PF02954 Bacterial regulatory protein, Fis family E2544_21970 PF00929 Exonuclease E2544_21975 PF01435 Peptidase family M48 E2544_21980 PF03193 RsgA GTPase E2544_21985 PF00293 NUDIX domain E2544_21990 PF01245 Ribosomal protein L19 E2544_22010 PF00009 Elongation factor Tu GTP binding domain E2544_22015 PF01507 Phosphoadenosine phosphosulfate reductase family E2544_22020 PF01507 Phosphoadenosine phosphosulfate reductase family E2544_22025 PF00005 ABC transporter E2544_22025 PF17850 CysA C-terminal regulatory domain E2544_22025 PF12857 TOBE-like domain E2544_22030 PF00528 Binding-protein-dependent transport system inner membrane component E2544_22035 PF00528 Binding-protein-dependent transport system inner membrane component E2544_22045 PF00578 AhpC/TSA family E2544_22045 PF10417 C-terminal domain of 1-Cys peroxiredoxin E2544_22050 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E2544_22050 PF02770 Acyl-CoA dehydrogenase, middle domain E2544_22050 PF12806 Acetyl-CoA dehydrogenase C-terminal like E2544_22050 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E2544_22055 PF03401 Tripartite tricarboxylate transporter family receptor E2544_22060 PF00378 Enoyl-CoA hydratase/isomerase E2544_22060 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain E2544_22060 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain E2544_22065 PF02515 CoA-transferase family III E2544_22070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_22070 PF03466 LysR substrate binding domain E2544_22075 PF02080 TrkA-C domain E2544_22075 PF06826 Predicted Permease Membrane Region E2544_22080 PF00155 Aminotransferase class I and II E2544_22085 PF06826 Predicted Permease Membrane Region E2544_22090 PF00766 Electron transfer flavoprotein FAD-binding domain E2544_22090 PF01012 Electron transfer flavoprotein domain E2544_22095 PF01012 Electron transfer flavoprotein domain E2544_22100 PF00850 Histone deacetylase domain E2544_22105 PF13406 Transglycosylase SLT domain E2544_22120 PF03401 Tripartite tricarboxylate transporter family receptor E2544_22125 PF00291 Pyridoxal-phosphate dependent enzyme E2544_22135 PF01370 NAD dependent epimerase/dehydratase family E2544_22140 PF00294 pfkB family carbohydrate kinase E2544_22145 PF18073 Rubredoxin metal binding domain E2544_22155 PF00216 Bacterial DNA-binding protein E2544_22160 PF00575 S1 RNA binding domain E2544_22165 PF02224 Cytidylate kinase E2544_22170 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) E2544_22175 PF02153 Prephenate dehydrogenase E2544_22185 PF01842 ACT domain E2544_22185 PF00800 Prephenate dehydratase E2544_22185 PF01817 Chorismate mutase type II E2544_22190 PF00266 Aminotransferase class-V E2544_22195 PF03989 DNA gyrase C-terminal domain, beta-propeller E2544_22195 PF00521 DNA gyrase/topoisomerase IV, subunit A E2544_22200 PF00691 OmpA family E2544_22210 PF13419 Haloacid dehalogenase-like hydrolase E2544_22215 PF07690 Major Facilitator Superfamily E2544_22230 PF00108 Thiolase, N-terminal domain E2544_22230 PF02803 Thiolase, C-terminal domain E2544_22235 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E2544_22235 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E2544_22235 PF02770 Acyl-CoA dehydrogenase, middle domain E2544_22240 PF13193 AMP-binding enzyme C-terminal domain E2544_22240 PF00501 AMP-binding enzyme E2544_22245 PF13452 N-terminal half of MaoC dehydratase E2544_22250 PF03401 Tripartite tricarboxylate transporter family receptor E2544_22255 PF03401 Tripartite tricarboxylate transporter family receptor E2544_22265 PF01575 MaoC like domain E2544_22265 PF00171 Aldehyde dehydrogenase family E2544_22270 PF08442 ATP-grasp domain E2544_22270 PF00549 CoA-ligase E2544_22275 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E2544_22275 PF02770 Acyl-CoA dehydrogenase, middle domain E2544_22275 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E2544_22285 PF02515 CoA-transferase family III E2544_22290 PF00378 Enoyl-CoA hydratase/isomerase E2544_22295 PF00501 AMP-binding enzyme E2544_22295 PF13193 AMP-binding enzyme C-terminal domain E2544_22300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_22300 PF03466 LysR substrate binding domain E2544_22305 PF01494 FAD binding domain E2544_22310 PF07690 Major Facilitator Superfamily E2544_22320 PF02350 UDP-N-acetylglucosamine 2-epimerase E2544_22330 PF13632 Glycosyl transferase family group 2 E2544_22330 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain E2544_22350 PF13406 Transglycosylase SLT domain E2544_22355 PF04305 Protein of unknown function (DUF455) E2544_22370 PF00664 ABC transporter transmembrane region E2544_22370 PF00005 ABC transporter E2544_22380 PF02875 Mur ligase family, glutamate ligase domain E2544_22380 PF08245 Mur ligase middle domain E2544_22380 PF08443 RimK-like ATP-grasp domain E2544_22385 PF05532 CsbD-like E2544_22395 PF04972 BON domain E2544_22400 PF02567 Phenazine biosynthesis-like protein E2544_22410 PF03239 Iron permease FTR1 family E2544_22420 PF10634 Fe2+ transport protein E2544_22430 PF07879 PHB/PHA accumulation regulator DNA-binding domain E2544_22430 PF05233 PHB accumulation regulatory domain E2544_22435 PF00106 short chain dehydrogenase E2544_22440 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus E2544_22450 PF01479 S4 domain E2544_22450 PF00849 RNA pseudouridylate synthase E2544_22455 PF13525 Outer membrane lipoprotein E2544_22460 PF01965 DJ-1/PfpI family E2544_22470 PF04851 Type III restriction enzyme, res subunit E2544_22470 PF13307 Helicase C-terminal domain E2544_22475 PF17674 HHH domain E2544_22475 PF00575 S1 RNA binding domain E2544_22475 PF09371 Tex-like protein N-terminal domain E2544_22475 PF16921 Tex protein YqgF-like domain E2544_22485 PF00579 tRNA synthetases class I (W and Y) E2544_22510 PF07715 TonB-dependent Receptor Plug Domain E2544_22510 PF00593 TonB dependent receptor E2544_22515 PF16220 Domain of unknown function (DUF4880) E2544_22515 PF04773 FecR protein E2544_22520 PF08281 Sigma-70, region 4 E2544_22520 PF04542 Sigma-70 region 2 E2544_22525 PF03969 AFG1-like ATPase E2544_22530 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E2544_22530 PF07992 Pyridine nucleotide-disulphide oxidoreductase E2544_22535 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) E2544_22535 PF00364 Biotin-requiring enzyme E2544_22535 PF02817 e3 binding domain E2544_22540 PF16078 2-oxoglutarate dehydrogenase N-terminus E2544_22540 PF00676 Dehydrogenase E1 component E2544_22540 PF16870 2-oxoglutarate dehydrogenase C-terminal E2544_22540 PF02779 Transketolase, pyrimidine binding domain E2544_22545 PF01037 Lrp/AsnC ligand binding domain E2544_22550 PF00291 Pyridoxal-phosphate dependent enzyme E2544_22560 PF01546 Peptidase family M20/M25/M40 E2544_22560 PF07687 Peptidase dimerisation domain E2544_22565 PF01546 Peptidase family M20/M25/M40 E2544_22565 PF07687 Peptidase dimerisation domain E2544_22570 PF03169 OPT oligopeptide transporter protein E2544_22575 PF00456 Transketolase, thiamine diphosphate binding domain E2544_22575 PF17831 Pyruvate dehydrogenase E1 component middle domain E2544_22580 PF01515 Phosphate acetyl/butaryl transferase E2544_22580 PF00390 Malic enzyme, N-terminal domain E2544_22580 PF03949 Malic enzyme, NAD binding domain E2544_22595 PF00285 Citrate synthase, C-terminal domain E2544_22600 PF03937 Flavinator of succinate dehydrogenase E2544_22605 PF13085 2Fe-2S iron-sulfur cluster binding domain E2544_22610 PF02910 Fumarate reductase flavoprotein C-term E2544_22610 PF00890 FAD binding domain E2544_22615 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit E2544_22620 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit E2544_22625 PF00392 Bacterial regulatory proteins, gntR family E2544_22625 PF07702 UTRA domain E2544_22630 PF00056 lactate/malate dehydrogenase, NAD binding domain E2544_22630 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain E2544_22640 PF00285 Citrate synthase, C-terminal domain E2544_22645 PF03972 MmgE/PrpD family E2544_22655 PF02926 THUMP domain E2544_22655 PF01170 Putative RNA methylase family UPF0020 E2544_22680 PF13193 AMP-binding enzyme C-terminal domain E2544_22680 PF00501 AMP-binding enzyme E2544_22690 PF01430 Hsp33 protein E2544_22700 PF04977 Septum formation initiator E2544_22705 PF03952 Enolase, N-terminal domain E2544_22705 PF00113 Enolase, C-terminal TIM barrel domain E2544_22720 PF06418 CTP synthase N-terminus E2544_22720 PF00117 Glutamine amidotransferase class-I E2544_22730 PF01321 Creatinase/Prolidase N-terminal domain E2544_22730 PF00557 Metallopeptidase family M24 E2544_22740 PF03576 Peptidase family S58 E2544_22745 PF00528 Binding-protein-dependent transport system inner membrane component E2544_22745 PF12911 N-terminal TM domain of oligopeptide transport permease C E2544_22750 PF00528 Binding-protein-dependent transport system inner membrane component E2544_22755 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E2544_22760 PF00005 ABC transporter E2544_22760 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E2544_22765 PF01112 Asparaginase E2544_22775 PF13673 Acetyltransferase (GNAT) domain E2544_22780 PF01144 Coenzyme A transferase E2544_22785 PF01144 Coenzyme A transferase E2544_22800 PF16363 GDP-mannose 4,6 dehydratase E2544_22815 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E2544_22815 PF00005 ABC transporter E2544_22820 PF12911 N-terminal TM domain of oligopeptide transport permease C E2544_22820 PF00528 Binding-protein-dependent transport system inner membrane component E2544_22825 PF00528 Binding-protein-dependent transport system inner membrane component E2544_22830 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E2544_22840 PF07729 FCD domain E2544_22840 PF00392 Bacterial regulatory proteins, gntR family E2544_22845 PF00202 Aminotransferase class-III E2544_22850 PF01212 Beta-eliminating lyase E2544_22855 PF00892 EamA-like transporter family E2544_22870 PF03928 Haem-degrading E2544_22875 PF13193 AMP-binding enzyme C-terminal domain E2544_22875 PF00501 AMP-binding enzyme E2544_22875 PF16177 Acetyl-coenzyme A synthetase N-terminus E2544_22880 PF00877 NlpC/P60 family E2544_22890 PF03466 LysR substrate binding domain E2544_22890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_22895 PF00171 Aldehyde dehydrogenase family E2544_22905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_22915 PF02789 Cytosol aminopeptidase family, N-terminal domain E2544_22915 PF00883 Cytosol aminopeptidase family, catalytic domain E2544_22930 PF01027 Inhibitor of apoptosis-promoting Bax1 E2544_22945 PF03401 Tripartite tricarboxylate transporter family receptor E2544_22955 PF00291 Pyridoxal-phosphate dependent enzyme E2544_22965 PF02565 Recombination protein O C terminal E2544_22965 PF11967 Recombination protein O N terminal E2544_22970 PF01926 50S ribosome-binding GTPase E2544_22970 PF07650 KH domain E2544_22975 PF14622 Ribonuclease-III-like E2544_22975 PF00035 Double-stranded RNA binding motif E2544_22980 PF10502 Signal peptidase, peptidase S26 E2544_22985 PF06421 GTP-binding protein LepA C-terminus E2544_22985 PF00009 Elongation factor Tu GTP binding domain E2544_22985 PF00679 Elongation factor G C-terminus E2544_22985 PF03144 Elongation factor Tu domain 2 E2544_22990 PF13180 PDZ domain E2544_23005 PF08281 Sigma-70, region 4 E2544_23005 PF04542 Sigma-70 region 2 E2544_23015 PF02801 Beta-ketoacyl synthase, C-terminal domain E2544_23015 PF00109 Beta-ketoacyl synthase, N-terminal domain E2544_23020 PF00550 Phosphopantetheine attachment site E2544_23030 PF00698 Acyl transferase domain E2544_23035 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III E2544_23035 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal E2544_23040 PF02504 Fatty acid synthesis protein E2544_23045 PF01783 Ribosomal L32p protein family E2544_23050 PF02620 Large ribosomal RNA subunit accumulation protein YceD E2544_23055 PF02545 Maf-like protein E2544_23060 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E2544_23065 PF01510 N-acetylmuramoyl-L-alanine amidase E2544_23070 PF01794 Ferric reductase like transmembrane component E2544_23075 PF00174 Oxidoreductase molybdopterin binding domain E2544_23085 PF00849 RNA pseudouridylate synthase E2544_23085 PF01479 S4 domain E2544_23090 PF10150 Ribonuclease E/G family E2544_23090 PF00575 S1 RNA binding domain E2544_23090 PF12111 Polyribonucleotide phosphorylase C terminal E2544_23095 PF03466 LysR substrate binding domain E2544_23095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_23105 PF08666 SAF domain E2544_23105 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus E2544_23110 PF03401 Tripartite tricarboxylate transporter family receptor E2544_23115 PF09411 Lipid A 3-O-deacylase (PagL) E2544_23120 PF01039 Carboxyl transferase domain E2544_23120 PF17848 Acetyl-coA carboxylase zinc finger domain E2544_23125 PF00290 Tryptophan synthase alpha chain E2544_23130 PF00291 Pyridoxal-phosphate dependent enzyme E2544_23135 PF07687 Peptidase dimerisation domain E2544_23135 PF01546 Peptidase family M20/M25/M40 E2544_23140 PF07690 Major Facilitator Superfamily E2544_23145 PF04607 Region found in RelA / SpoT proteins E2544_23145 PF02824 TGS domain E2544_23145 PF13291 ACT domain E2544_23150 PF06167 Glucose-regulated metallo-peptidase M90 E2544_23155 PF00258 Flavodoxin E2544_23160 PF01042 Endoribonuclease L-PSP E2544_23165 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain E2544_23165 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family E2544_23170 PF11953 Domain of unknown function (DUF3470) E2544_23170 PF00037 4Fe-4S binding domain E2544_23175 PF00970 Oxidoreductase FAD-binding domain E2544_23175 PF00175 Oxidoreductase NAD-binding domain E2544_23185 PF04060 Putative Fe-S cluster E2544_23190 PF00730 HhH-GPD superfamily base excision DNA repair protein E2544_23190 PF10576 Iron-sulfur binding domain of endonuclease III E2544_23190 PF00633 Helix-hairpin-helix motif E2544_23195 PF00005 ABC transporter E2544_23195 PF12399 Branched-chain amino acid ATP-binding cassette transporter E2544_23200 PF00005 ABC transporter E2544_23210 PF02653 Branched-chain amino acid transport system / permease component E2544_23225 PF01063 Amino-transferase class IV E2544_23230 PF05506 Domain of unknown function (DUF756) E2544_23230 PF04185 Phosphoesterase family E2544_23240 PF00005 ABC transporter E2544_23245 PF00005 ABC transporter E2544_23245 PF12399 Branched-chain amino acid ATP-binding cassette transporter E2544_23260 PF02632 BioY family E2544_23265 PF02361 Cobalt transport protein E2544_23270 PF00005 ABC transporter E2544_23275 PF01641 SelR domain E2544_23280 PF04279 Intracellular septation protein A E2544_23295 PF00561 alpha/beta hydrolase fold E2544_23300 PF02668 Taurine catabolism dioxygenase TauD, TfdA family E2544_23310 PF03401 Tripartite tricarboxylate transporter family receptor E2544_23315 PF09339 IclR helix-turn-helix domain E2544_23315 PF01614 Bacterial transcriptional regulator E2544_23320 PF12826 Helix-hairpin-helix motif E2544_23320 PF01653 NAD-dependent DNA ligase adenylation domain E2544_23320 PF00533 BRCA1 C Terminus (BRCT) domain E2544_23320 PF03120 NAD-dependent DNA ligase OB-fold domain E2544_23320 PF03119 NAD-dependent DNA ligase C4 zinc finger domain E2544_23330 PF06470 SMC proteins Flexible Hinge Domain E2544_23330 PF02463 RecF/RecN/SMC N terminal domain E2544_23335 PF07690 Major Facilitator Superfamily E2544_23340 PF03167 Uracil DNA glycosylase superfamily E2544_23345 PF00814 Glycoprotease family E2544_23350 PF00072 Response regulator receiver domain E2544_23350 PF00486 Transcriptional regulatory protein, C terminal E2544_23355 PF00512 His Kinase A (phospho-acceptor) domain E2544_23355 PF00672 HAMP domain E2544_23355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2544_23360 PF00578 AhpC/TSA family E2544_23365 PF02627 Carboxymuconolactone decarboxylase family E2544_23375 PF02542 YgbB family E2544_23380 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase E2544_23385 PF17757 UvrB interaction domain E2544_23385 PF03461 TRCF domain E2544_23385 PF00271 Helicase conserved C-terminal domain E2544_23385 PF00270 DEAD/DEAH box helicase E2544_23385 PF02559 CarD-like/TRCF domain E2544_23395 PF00593 TonB dependent receptor E2544_23395 PF07715 TonB-dependent Receptor Plug Domain E2544_23405 PF00361 Proton-conducting membrane transporter E2544_23410 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus E2544_23410 PF00361 Proton-conducting membrane transporter E2544_23415 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus E2544_23415 PF00361 Proton-conducting membrane transporter E2544_23420 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L E2544_23425 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 E2544_23430 PF12838 4Fe-4S dicluster domain E2544_23435 PF00146 NADH dehydrogenase E2544_23440 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region E2544_23440 PF00384 Molybdopterin oxidoreductase E2544_23440 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal E2544_23445 PF10531 SLBB domain E2544_23445 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region E2544_23445 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit E2544_23455 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit E2544_23460 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit E2544_23465 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit E2544_23470 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 E2544_23475 PF13609 Gram-negative porin E2544_23495 PF01569 PAP2 superfamily E2544_23500 PF00149 Calcineurin-like phosphoesterase E2544_23505 PF00781 Diacylglycerol kinase catalytic domain E2544_23515 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E2544_23520 PF03466 LysR substrate binding domain E2544_23520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_23525 PF00440 Bacterial regulatory proteins, tetR family E2544_23525 PF08361 MAATS-type transcriptional repressor, C-terminal region E2544_23530 PF00529 HlyD membrane-fusion protein of T1SS E2544_23530 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E2544_23535 PF00873 AcrB/AcrD/AcrF family E2544_23540 PF02321 Outer membrane efflux protein E2544_23550 PF02321 Outer membrane efflux protein E2544_23555 PF00873 AcrB/AcrD/AcrF family E2544_23560 PF13533 Biotin-lipoyl like E2544_23565 PF02028 BCCT, betaine/carnitine/choline family transporter E2544_23570 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily E2544_23575 PF00440 Bacterial regulatory proteins, tetR family E2544_23575 PF08361 MAATS-type transcriptional repressor, C-terminal region E2544_23580 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E2544_23585 PF00873 AcrB/AcrD/AcrF family E2544_23590 PF02321 Outer membrane efflux protein E2544_23605 PF01522 Polysaccharide deacetylase E2544_23620 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E2544_23630 PF04115 Ureidoglycolate lyase E2544_23640 PF03401 Tripartite tricarboxylate transporter family receptor E2544_23645 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E2544_23655 PF00005 ABC transporter E2544_23655 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E2544_23660 PF12911 N-terminal TM domain of oligopeptide transport permease C E2544_23660 PF00528 Binding-protein-dependent transport system inner membrane component E2544_23665 PF00528 Binding-protein-dependent transport system inner membrane component E2544_23675 PF05661 Protein of unknown function (DUF808) E2544_23680 PF06906 Protein of unknown function (DUF1272) E2544_23685 PF04405 Domain of Unknown function (DUF542) E2544_23685 PF01814 Hemerythrin HHE cation binding domain E2544_23690 PF00158 Sigma-54 interaction domain E2544_23690 PF02954 Bacterial regulatory protein, Fis family E2544_23695 PF03401 Tripartite tricarboxylate transporter family receptor E2544_23700 PF08240 Alcohol dehydrogenase GroES-like domain E2544_23700 PF00107 Zinc-binding dehydrogenase E2544_23705 PF02515 CoA-transferase family III E2544_23710 PF03466 LysR substrate binding domain E2544_23710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_23715 PF01979 Amidohydrolase family E2544_23725 PF07690 Major Facilitator Superfamily E2544_23730 PF03466 LysR substrate binding domain E2544_23730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_23735 PF02817 e3 binding domain E2544_23735 PF00364 Biotin-requiring enzyme E2544_23735 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) E2544_23745 PF02780 Transketolase, C-terminal domain E2544_23745 PF00364 Biotin-requiring enzyme E2544_23745 PF02779 Transketolase, pyrimidine binding domain E2544_23750 PF00005 ABC transporter E2544_23760 PF00528 Binding-protein-dependent transport system inner membrane component E2544_23765 PF00528 Binding-protein-dependent transport system inner membrane component E2544_23770 PF00107 Zinc-binding dehydrogenase E2544_23770 PF08240 Alcohol dehydrogenase GroES-like domain E2544_23775 PF00106 short chain dehydrogenase E2544_23790 PF00356 Bacterial regulatory proteins, lacI family E2544_23795 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase E2544_23795 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase E2544_23800 PF00528 Binding-protein-dependent transport system inner membrane component E2544_23805 PF00528 Binding-protein-dependent transport system inner membrane component E2544_23810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_23810 PF03466 LysR substrate binding domain E2544_23815 PF00884 Sulfatase E2544_23825 PF00106 short chain dehydrogenase E2544_23830 PF03600 Citrate transporter E2544_23835 PF00072 Response regulator receiver domain E2544_23835 PF00486 Transcriptional regulatory protein, C terminal E2544_23840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2544_23840 PF00512 His Kinase A (phospho-acceptor) domain E2544_23865 PF05721 Phytanoyl-CoA dioxygenase (PhyH) E2544_23870 PF00501 AMP-binding enzyme E2544_23870 PF13193 AMP-binding enzyme C-terminal domain E2544_23875 PF05721 Phytanoyl-CoA dioxygenase (PhyH) E2544_23890 PF02653 Branched-chain amino acid transport system / permease component E2544_23900 PF00005 ABC transporter E2544_23900 PF12399 Branched-chain amino acid ATP-binding cassette transporter E2544_23905 PF00005 ABC transporter E2544_23915 PF00155 Aminotransferase class I and II E2544_23915 PF00392 Bacterial regulatory proteins, gntR family E2544_23920 PF00892 EamA-like transporter family E2544_23945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_23945 PF03466 LysR substrate binding domain E2544_23950 PF02659 Putative manganese efflux pump E2544_23955 PF03401 Tripartite tricarboxylate transporter family receptor E2544_23960 PF16347 Domain of unknown function (DUF4976) E2544_23960 PF00884 Sulfatase E2544_23965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_23965 PF03466 LysR substrate binding domain E2544_23995 PF01588 Putative tRNA binding domain E2544_24000 PF01266 FAD dependent oxidoreductase E2544_24005 PF01042 Endoribonuclease L-PSP E2544_24010 PF07364 Metallopeptidase family M81 E2544_24010 PF07171 MlrC C-terminus E2544_24015 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E2544_24020 PF00528 Binding-protein-dependent transport system inner membrane component E2544_24025 PF00528 Binding-protein-dependent transport system inner membrane component E2544_24030 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E2544_24030 PF00005 ABC transporter E2544_24035 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E2544_24035 PF00005 ABC transporter E2544_24040 PF07969 Amidohydrolase family E2544_24050 PF02515 CoA-transferase family III E2544_24055 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E2544_24055 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E2544_24055 PF02770 Acyl-CoA dehydrogenase, middle domain E2544_24060 PF03401 Tripartite tricarboxylate transporter family receptor E2544_24065 PF14765 Polyketide synthase dehydratase E2544_24065 PF09277 Erythronolide synthase, docking E2544_24065 PF00109 Beta-ketoacyl synthase, N-terminal domain E2544_24065 PF08659 KR domain E2544_24065 PF00550 Phosphopantetheine attachment site E2544_24065 PF02801 Beta-ketoacyl synthase, C-terminal domain E2544_24065 PF08990 Erythronolide synthase docking E2544_24065 PF16197 Ketoacyl-synthetase C-terminal extension E2544_24065 PF08240 Alcohol dehydrogenase GroES-like domain E2544_24065 PF00698 Acyl transferase domain E2544_24070 PF00378 Enoyl-CoA hydratase/isomerase E2544_24080 PF02515 CoA-transferase family III E2544_24090 PF07992 Pyridine nucleotide-disulphide oxidoreductase E2544_24090 PF14759 Reductase C-terminal E2544_24095 PF04229 GrpB protein E2544_24105 PF07687 Peptidase dimerisation domain E2544_24105 PF01546 Peptidase family M20/M25/M40 E2544_24110 PF03466 LysR substrate binding domain E2544_24110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_24130 PF00497 Bacterial extracellular solute-binding proteins, family 3 E2544_24135 PF00528 Binding-protein-dependent transport system inner membrane component E2544_24140 PF00528 Binding-protein-dependent transport system inner membrane component E2544_24145 PF00005 ABC transporter E2544_24150 PF13416 Bacterial extracellular solute-binding protein E2544_24155 PF00528 Binding-protein-dependent transport system inner membrane component E2544_24160 PF00528 Binding-protein-dependent transport system inner membrane component E2544_24165 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E2544_24170 PF01220 Dehydroquinase class II E2544_24180 PF08659 KR domain E2544_24180 PF16197 Ketoacyl-synthetase C-terminal extension E2544_24180 PF00550 Phosphopantetheine attachment site E2544_24180 PF00107 Zinc-binding dehydrogenase E2544_24180 PF14765 Polyketide synthase dehydratase E2544_24180 PF08240 Alcohol dehydrogenase GroES-like domain E2544_24180 PF00698 Acyl transferase domain E2544_24180 PF00109 Beta-ketoacyl synthase, N-terminal domain E2544_24180 PF02801 Beta-ketoacyl synthase, C-terminal domain E2544_24185 PF00005 ABC transporter E2544_24185 PF08402 TOBE domain E2544_24200 PF00011 Hsp20/alpha crystallin family E2544_24215 PF03401 Tripartite tricarboxylate transporter family receptor E2544_24220 PF01070 FMN-dependent dehydrogenase E2544_24225 PF07063 Domain of unknown function (DUF1338) E2544_24230 PF03466 LysR substrate binding domain E2544_24230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_24235 PF04185 Phosphoesterase family E2544_24235 PF05506 Domain of unknown function (DUF756) E2544_24240 PF00528 Binding-protein-dependent transport system inner membrane component E2544_24245 PF00005 ABC transporter E2544_24255 PF13344 Haloacid dehalogenase-like hydrolase E2544_24260 PF01418 Helix-turn-helix domain, rpiR family E2544_24260 PF01380 SIS domain E2544_24265 PF03840 Preprotein translocase SecG subunit E2544_24270 PF00121 Triosephosphate isomerase E2544_24275 PF08659 KR domain E2544_24275 PF14765 Polyketide synthase dehydratase E2544_24275 PF02801 Beta-ketoacyl synthase, C-terminal domain E2544_24275 PF00109 Beta-ketoacyl synthase, N-terminal domain E2544_24275 PF16197 Ketoacyl-synthetase C-terminal extension E2544_24275 PF00698 Acyl transferase domain E2544_24275 PF08240 Alcohol dehydrogenase GroES-like domain E2544_24275 PF00550 Phosphopantetheine attachment site E2544_24295 PF00682 HMGL-like E2544_24300 PF03401 Tripartite tricarboxylate transporter family receptor E2544_24305 PF02515 CoA-transferase family III E2544_24310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_24310 PF03466 LysR substrate binding domain E2544_24315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_24315 PF03466 LysR substrate binding domain E2544_24320 PF00795 Carbon-nitrogen hydrolase E2544_24335 PF00291 Pyridoxal-phosphate dependent enzyme E2544_24335 PF13291 ACT domain E2544_24345 PF00575 S1 RNA binding domain E2544_24345 PF01138 3' exoribonuclease family, domain 1 E2544_24345 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain E2544_24345 PF00013 KH domain E2544_24345 PF03725 3' exoribonuclease family, domain 2 E2544_24350 PF00312 Ribosomal protein S15 E2544_24360 PF01066 CDP-alcohol phosphatidyltransferase E2544_24365 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain E2544_24365 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain E2544_24370 PF10369 Small subunit of acetolactate synthase E2544_24375 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain E2544_24375 PF00205 Thiamine pyrophosphate enzyme, central domain E2544_24375 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E2544_24380 PF12805 FUSC-like inner membrane protein yccS E2544_24385 PF03883 Peroxide stress protein YaaA E2544_24390 PF00106 short chain dehydrogenase E2544_24395 PF00999 Sodium/hydrogen exchanger family E2544_24395 PF02254 TrkA-N domain E2544_24405 PF02203 Tar ligand binding domain homologue E2544_24405 PF00672 HAMP domain E2544_24405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E2544_24410 PF01613 Flavin reductase like domain E2544_24415 PF00795 Carbon-nitrogen hydrolase E2544_24420 PF07690 Major Facilitator Superfamily E2544_24430 PF12792 CSS motif domain associated with EAL E2544_24430 PF00563 EAL domain E2544_24435 PF03401 Tripartite tricarboxylate transporter family receptor E2544_24440 PF13378 Enolase C-terminal domain-like E2544_24440 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain E2544_24450 PF01979 Amidohydrolase family E2544_24475 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E2544_24475 PF02403 Seryl-tRNA synthetase N-terminal domain E2544_24480 PF00004 ATPase family associated with various cellular activities (AAA) E2544_24480 PF16193 AAA C-terminal domain E2544_24480 PF12002 MgsA AAA+ ATPase C terminal E2544_24485 PF00795 Carbon-nitrogen hydrolase E2544_24495 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E2544_24500 PF00528 Binding-protein-dependent transport system inner membrane component E2544_24505 PF12911 N-terminal TM domain of oligopeptide transport permease C E2544_24505 PF00528 Binding-protein-dependent transport system inner membrane component E2544_24510 PF00005 ABC transporter E2544_24510 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E2544_24515 PF00005 ABC transporter E2544_24515 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E2544_24520 PF01418 Helix-turn-helix domain, rpiR family E2544_24520 PF01380 SIS domain E2544_24525 PF07969 Amidohydrolase family E2544_24530 PF01042 Endoribonuclease L-PSP E2544_24535 PF03548 Outer membrane lipoprotein carrier protein LolA E2544_24540 PF13491 4TM region of DNA translocase FtsK/SpoIIIE E2544_24540 PF17854 FtsK alpha domain E2544_24540 PF01580 FtsK/SpoIIIE family E2544_24540 PF09397 Ftsk gamma domain E2544_24545 PF07992 Pyridine nucleotide-disulphide oxidoreductase E2544_24550 PF01713 Smr domain E2544_24550 PF00488 MutS domain V E2544_24555 PF00893 Small Multidrug Resistance protein E2544_24560 PF00474 Sodium:solute symporter family E2544_24575 PF03814 Potassium-transporting ATPase A subunit E2544_24585 PF02669 K+-transporting ATPase, c chain E2544_24590 PF02702 Osmosensitive K+ channel His kinase sensor domain E2544_24590 PF13493 Domain of unknown function (DUF4118) E2544_24590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2544_24590 PF13492 GAF domain E2544_24590 PF00512 His Kinase A (phospho-acceptor) domain E2544_24595 PF00072 Response regulator receiver domain E2544_24595 PF00486 Transcriptional regulatory protein, C terminal E2544_24610 PF00701 Dihydrodipicolinate synthetase family E2544_24615 PF00672 HAMP domain E2544_24615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E2544_24615 PF02203 Tar ligand binding domain homologue E2544_24620 PF00180 Isocitrate/isopropylmalate dehydrogenase E2544_24630 PF00034 Cytochrome c E2544_24635 PF00034 Cytochrome c E2544_24640 PF01434 Peptidase family M41 E2544_24640 PF17862 AAA+ lid domain E2544_24640 PF00004 ATPase family associated with various cellular activities (AAA) E2544_24660 PF13302 Acetyltransferase (GNAT) domain E2544_24665 PF00675 Insulinase (Peptidase family M16) E2544_24665 PF05193 Peptidase M16 inactive domain E2544_24675 PF00226 DnaJ domain E2544_24675 PF01556 DnaJ C terminal domain E2544_24675 PF00684 DnaJ central domain E2544_24680 PF00012 Hsp70 protein E2544_24690 PF01025 GrpE E2544_24700 PF00762 Ferrochelatase E2544_24705 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding E2544_24705 PF01628 HrcA protein C terminal domain E2544_24710 PF01513 ATP-NAD kinase E2544_24715 PF02463 RecF/RecN/SMC N terminal domain E2544_24720 PF01475 Ferric uptake regulator family E2544_24725 PF04355 SmpA / OmlA family E2544_24730 PF05173 Dihydrodipicolinate reductase, C-terminus E2544_24730 PF01113 Dihydrodipicolinate reductase, N-terminus E2544_24735 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain E2544_24735 PF01565 FAD binding domain E2544_24750 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain E2544_24750 PF00205 Thiamine pyrophosphate enzyme, central domain E2544_24750 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E2544_24760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_24760 PF03466 LysR substrate binding domain E2544_24765 PF00171 Aldehyde dehydrogenase family E2544_24775 PF03401 Tripartite tricarboxylate transporter family receptor E2544_24780 PF03466 LysR substrate binding domain E2544_24780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_24795 PF05683 Fumarase C-terminus E2544_24795 PF05681 Fumarate hydratase (Fumerase) E2544_24800 PF02910 Fumarate reductase flavoprotein C-term E2544_24800 PF00890 FAD binding domain E2544_24815 PF13085 2Fe-2S iron-sulfur cluster binding domain E2544_24815 PF13183 4Fe-4S dicluster domain E2544_24825 PF13953 PapC C-terminal domain E2544_24825 PF13954 PapC N-terminal domain E2544_24825 PF00577 Outer membrane usher protein E2544_24830 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain E2544_24830 PF02753 Pili assembly chaperone PapD, C-terminal domain E2544_24840 PF00072 Response regulator receiver domain E2544_24840 PF00196 Bacterial regulatory proteins, luxR family E2544_24845 PF00512 His Kinase A (phospho-acceptor) domain E2544_24845 PF00072 Response regulator receiver domain E2544_24845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2544_24845 PF09456 RcsC Alpha-Beta-Loop (ABL) E2544_24850 PF00990 Diguanylate cyclase, GGDEF domain E2544_24850 PF00563 EAL domain E2544_24850 PF13426 PAS domain E2544_24855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2544_24855 PF00512 His Kinase A (phospho-acceptor) domain E2544_24855 PF09456 RcsC Alpha-Beta-Loop (ABL) E2544_24855 PF00072 Response regulator receiver domain E2544_24860 PF11922 Domain of unknown function (DUF3440) E2544_24860 PF01507 Phosphoadenosine phosphosulfate reductase family E2544_24865 PF02195 ParB-like nuclease domain E2544_24870 PF12951 Passenger-associated-transport-repeat E2544_24910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_24910 PF03466 LysR substrate binding domain E2544_24915 PF00293 NUDIX domain E2544_24915 PF09297 NADH pyrophosphatase zinc ribbon domain E2544_24920 PF03588 Leucyl/phenylalanyl-tRNA protein transferase E2544_24925 PF04377 Arginine-tRNA-protein transferase, C terminus E2544_24925 PF04376 Arginine-tRNA-protein transferase, N terminus E2544_24930 PF01180 Dihydroorotate dehydrogenase E2544_24940 PF03401 Tripartite tricarboxylate transporter family receptor E2544_24945 PF09339 IclR helix-turn-helix domain E2544_24945 PF01614 Bacterial transcriptional regulator E2544_24950 PF18146 Damage-inducible protein CinA KH domain E2544_24950 PF02464 Competence-damaged protein E2544_24950 PF00994 Probable molybdopterin binding domain E2544_24965 PF00271 Helicase conserved C-terminal domain E2544_24965 PF00270 DEAD/DEAH box helicase E2544_24980 PF01063 Amino-transferase class IV E2544_24995 PF00561 alpha/beta hydrolase fold E2544_25000 PF13181 Tetratricopeptide repeat E2544_25000 PF01435 Peptidase family M48 E2544_25005 PF00483 Nucleotidyl transferase E2544_25015 PF13609 Gram-negative porin E2544_25020 PF00690 Cation transporter/ATPase, N-terminus E2544_25020 PF00689 Cation transporting ATPase, C-terminus E2544_25035 PF00557 Metallopeptidase family M24 E2544_25035 PF05195 Aminopeptidase P, N-terminal domain E2544_25045 PF01494 FAD binding domain E2544_25050 PF01207 Dihydrouridine synthase (Dus) E2544_25055 PF02954 Bacterial regulatory protein, Fis family E2544_25060 PF02142 MGS-like domain E2544_25060 PF01808 AICARFT/IMPCHase bienzyme E2544_25065 PF02075 Crossover junction endodeoxyribonuclease RuvC E2544_25070 PF07499 RuvA, C-terminal domain E2544_25070 PF01330 RuvA N terminal domain E2544_25075 PF08338 Domain of unknown function (DUF1731) E2544_25075 PF01370 NAD dependent epimerase/dehydratase family E2544_25080 PF00291 Pyridoxal-phosphate dependent enzyme E2544_25085 PF17864 RuvB AAA lid domain E2544_25085 PF05496 Holliday junction DNA helicase RuvB P-loop domain E2544_25085 PF05491 RuvB C-terminal winged helix domain E2544_25095 PF00072 Response regulator receiver domain E2544_25095 PF00486 Transcriptional regulatory protein, C terminal E2544_25105 PF00270 DEAD/DEAH box helicase E2544_25105 PF16124 RecQ zinc-binding E2544_25105 PF09382 RQC domain E2544_25105 PF00570 HRDC domain E2544_25105 PF00271 Helicase conserved C-terminal domain E2544_25115 PF01654 Cytochrome bd terminal oxidase subunit I E2544_25120 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain E2544_25120 PF00749 tRNA synthetases class I (E and Q), catalytic domain E2544_25125 PF03775 Septum formation inhibitor MinC, C-terminal domain E2544_25125 PF05209 Septum formation inhibitor MinC, N-terminal domain E2544_25130 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain E2544_25135 PF03776 Septum formation topological specificity factor MinE E2544_25150 PF12848 ABC transporter E2544_25150 PF00005 ABC transporter E2544_25170 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E2544_25170 PF00005 ABC transporter E2544_25175 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E2544_25175 PF00005 ABC transporter E2544_25180 PF00528 Binding-protein-dependent transport system inner membrane component E2544_25180 PF12911 N-terminal TM domain of oligopeptide transport permease C E2544_25190 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E2544_25215 PF00111 2Fe-2S iron-sulfur cluster binding domain E2544_25220 PF00848 Ring hydroxylating alpha subunit (catalytic domain) E2544_25220 PF00355 Rieske [2Fe-2S] domain E2544_25225 PF00866 Ring hydroxylating beta subunit E2544_25230 PF13193 AMP-binding enzyme C-terminal domain E2544_25230 PF00501 AMP-binding enzyme E2544_25245 PF04199 Putative cyclase E2544_25265 PF12399 Branched-chain amino acid ATP-binding cassette transporter E2544_25265 PF00005 ABC transporter E2544_25270 PF00005 ABC transporter E2544_25275 PF00535 Glycosyl transferase family 2 E2544_25280 PF03466 LysR substrate binding domain E2544_25280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_25285 PF00294 pfkB family carbohydrate kinase E2544_25290 PF01081 KDPG and KHG aldolase E2544_25300 PF00005 ABC transporter E2544_25300 PF17755 UvrA DNA-binding domain E2544_25300 PF17760 UvrA interaction domain E2544_25305 PF04715 Anthranilate synthase component I, N terminal region E2544_25305 PF00425 chorismate binding enzyme E2544_25315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_25315 PF03466 LysR substrate binding domain E2544_25320 PF00848 Ring hydroxylating alpha subunit (catalytic domain) E2544_25320 PF00355 Rieske [2Fe-2S] domain E2544_25325 PF13577 SnoaL-like domain E2544_25330 PF00355 Rieske [2Fe-2S] domain E2544_25335 PF00899 ThiF family E2544_25340 PF02321 Outer membrane efflux protein E2544_25345 PF00005 ABC transporter E2544_25345 PF02687 FtsX-like permease family E2544_25345 PF12704 MacB-like periplasmic core domain E2544_25350 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E2544_25355 PF07690 Major Facilitator Superfamily E2544_25365 PF01243 Pyridoxamine 5'-phosphate oxidase E2544_25365 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region E2544_25370 PF01613 Flavin reductase like domain E2544_25375 PF01266 FAD dependent oxidoreductase E2544_25380 PF00551 Formyl transferase E2544_25385 PF01740 STAS domain E2544_25385 PF00916 Sulfate permease family E2544_25390 PF03466 LysR substrate binding domain E2544_25390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_25395 PF18158 Adaptive response protein AidB N-terminal domain E2544_25395 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E2544_25395 PF02770 Acyl-CoA dehydrogenase, middle domain E2544_25400 PF03401 Tripartite tricarboxylate transporter family receptor E2544_25405 PF02515 CoA-transferase family III E2544_25415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_25415 PF03466 LysR substrate binding domain E2544_25420 PF03401 Tripartite tricarboxylate transporter family receptor E2544_25430 PF00206 Lyase E2544_25430 PF10415 Fumarase C C-terminus E2544_25435 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE E2544_25440 PF01520 N-acetylmuramoyl-L-alanine amidase E2544_25440 PF11741 AMIN domain E2544_25445 PF09335 SNARE associated Golgi protein E2544_25450 PF01119 DNA mismatch repair protein, C-terminal domain E2544_25450 PF08676 MutL C terminal dimerisation domain E2544_25460 PF02769 AIR synthase related protein, C-terminal domain E2544_25460 PF00586 AIR synthase related protein, N-terminal domain E2544_25465 PF00308 Bacterial dnaA protein E2544_25475 PF01743 Poly A polymerase head domain E2544_25475 PF12626 Polymerase A arginine-rich C-terminus E2544_25475 PF12627 Probable RNA and SrmB- binding site of polymerase A E2544_25480 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) E2544_25485 PF00294 pfkB family carbohydrate kinase E2544_25490 PF03328 HpcH/HpaI aldolase/citrate lyase family E2544_25505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_25505 PF03466 LysR substrate binding domain E2544_25510 PF00378 Enoyl-CoA hydratase/isomerase E2544_25515 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E2544_25515 PF02770 Acyl-CoA dehydrogenase, middle domain E2544_25515 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E2544_25520 PF02770 Acyl-CoA dehydrogenase, middle domain E2544_25520 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E2544_25520 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E2544_25535 PF13193 AMP-binding enzyme C-terminal domain E2544_25535 PF00501 AMP-binding enzyme E2544_25540 PF03401 Tripartite tricarboxylate transporter family receptor E2544_25550 PF03401 Tripartite tricarboxylate transporter family receptor E2544_25555 PF03466 LysR substrate binding domain E2544_25555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_25560 PF00106 short chain dehydrogenase E2544_25565 PF13452 N-terminal half of MaoC dehydratase E2544_25570 PF02515 CoA-transferase family III E2544_25580 PF00378 Enoyl-CoA hydratase/isomerase E2544_25585 PF02091 Glycyl-tRNA synthetase alpha subunit E2544_25590 PF05746 DALR anticodon binding domain E2544_25590 PF02092 Glycyl-tRNA synthetase beta subunit E2544_25600 PF01553 Acyltransferase E2544_25610 PF00266 Aminotransferase class-V E2544_25615 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily E2544_25620 PF01327 Polypeptide deformylase E2544_25625 PF09317 Domain of unknown function (DUF1974) E2544_25625 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E2544_25625 PF02770 Acyl-CoA dehydrogenase, middle domain E2544_25625 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E2544_25630 PF07670 Nucleoside recognition E2544_25635 PF00224 Pyruvate kinase, barrel domain E2544_25635 PF02887 Pyruvate kinase, alpha/beta domain E2544_25640 PF02595 Glycerate kinase family E2544_25645 PF00398 Ribosomal RNA adenine dimethylase E2544_25650 PF09312 SurA N-terminal domain E2544_25650 PF00639 PPIC-type PPIASE domain E2544_25655 PF04453 LPS transport system D E2544_25660 PF01636 Phosphotransferase enzyme family E2544_25665 PF00483 Nucleotidyl transferase E2544_25690 PF01329 Pterin 4 alpha carbinolamine dehydratase E2544_25695 PF04972 BON domain E2544_25695 PF00691 OmpA family E2544_25700 PF07690 Major Facilitator Superfamily E2544_25705 PF01546 Peptidase family M20/M25/M40 E2544_25705 PF07687 Peptidase dimerisation domain E2544_25710 PF00155 Aminotransferase class I and II E2544_25715 PF03328 HpcH/HpaI aldolase/citrate lyase family E2544_25720 PF01037 Lrp/AsnC ligand binding domain E2544_25720 PF13404 AsnC-type helix-turn-helix domain E2544_25745 PF17151 Periplasmic sensor domain E2544_25745 PF00990 Diguanylate cyclase, GGDEF domain E2544_25750 PF05170 AsmA family E2544_25755 PF00884 Sulfatase E2544_25760 PF03352 Methyladenine glycosylase E2544_25765 PF03692 Putative zinc- or iron-chelating domain E2544_25780 PF01475 Ferric uptake regulator family E2544_25800 PF03180 NLPA lipoprotein E2544_25805 PF00528 Binding-protein-dependent transport system inner membrane component E2544_25810 PF09383 NIL domain E2544_25810 PF00005 ABC transporter E2544_25815 PF13802 Galactose mutarotase-like E2544_25815 PF01055 Glycosyl hydrolases family 31 E2544_25820 PF01266 FAD dependent oxidoreductase E2544_25820 PF05430 S-adenosyl-L-methionine-dependent methyltransferase E2544_25825 PF00459 Inositol monophosphatase family E2544_25830 PF00501 AMP-binding enzyme E2544_25830 PF13193 AMP-binding enzyme C-terminal domain E2544_25835 PF01546 Peptidase family M20/M25/M40 E2544_25835 PF07687 Peptidase dimerisation domain E2544_25840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_25840 PF03466 LysR substrate binding domain E2544_25845 PF03601 Conserved hypothetical protein 698 E2544_25850 PF03061 Thioesterase superfamily E2544_25855 PF00571 CBS domain E2544_25855 PF03448 MgtE intracellular N domain E2544_25855 PF01769 Divalent cation transporter E2544_25860 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP E2544_25870 PF01037 Lrp/AsnC ligand binding domain E2544_25875 PF00106 short chain dehydrogenase E2544_25885 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain E2544_25885 PF00205 Thiamine pyrophosphate enzyme, central domain E2544_25885 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E2544_25890 PF03401 Tripartite tricarboxylate transporter family receptor E2544_25895 PF07729 FCD domain E2544_25895 PF00392 Bacterial regulatory proteins, gntR family E2544_25905 PF01043 SecA preprotein cross-linking domain E2544_25905 PF02810 SEC-C motif E2544_25905 PF07516 SecA Wing and Scaffold domain E2544_25905 PF07517 SecA DEAD-like domain E2544_25910 PF01476 LysM domain E2544_25910 PF08525 Opacity-associated protein A N-terminal motif E2544_25910 PF01551 Peptidase family M23 E2544_25920 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase E2544_25925 PF12327 FtsZ family, C-terminal domain E2544_25925 PF00091 Tubulin/FtsZ family, GTPase domain E2544_25930 PF02491 SHS2 domain inserted in FTSA E2544_25935 PF03799 Cell division protein FtsQ E2544_25935 PF08478 POTRA domain, FtsQ-type E2544_25940 PF07478 D-ala D-ala ligase C-terminus E2544_25940 PF01820 D-ala D-ala ligase N-terminus E2544_25945 PF08245 Mur ligase middle domain E2544_25945 PF02875 Mur ligase family, glutamate ligase domain E2544_25945 PF01225 Mur ligase family, catalytic domain E2544_25950 PF04101 Glycosyltransferase family 28 C-terminal domain E2544_25950 PF03033 Glycosyltransferase family 28 N-terminal domain E2544_25955 PF01098 Cell cycle protein E2544_25960 PF02875 Mur ligase family, glutamate ligase domain E2544_25960 PF08245 Mur ligase middle domain E2544_25965 PF00953 Glycosyl transferase family 4 E2544_25970 PF02875 Mur ligase family, glutamate ligase domain E2544_25970 PF08245 Mur ligase middle domain E2544_25975 PF00905 Penicillin binding protein transpeptidase domain E2544_25975 PF03717 Penicillin-binding Protein dimerisation domain E2544_25980 PF04999 Cell division protein FtsL E2544_25985 PF01795 MraW methylase family E2544_25990 PF02381 MraZ protein, putative antitoxin-like E2544_26005 PF01979 Amidohydrolase family E2544_26010 PF07687 Peptidase dimerisation domain E2544_26010 PF01546 Peptidase family M20/M25/M40 E2544_26070 PF01037 Lrp/AsnC ligand binding domain E2544_26075 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily E2544_26080 PF01625 Peptide methionine sulfoxide reductase E2544_26085 PF00034 Cytochrome c E2544_26090 PF00920 Dehydratase family E2544_26095 PF01790 Prolipoprotein diacylglyceryl transferase E2544_26125 PF01970 Tripartite tricarboxylate transporter TctA family E2544_26135 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase E2544_26135 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase E2544_26140 PF02525 Flavodoxin-like fold E2544_26145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_26145 PF03466 LysR substrate binding domain E2544_26150 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E2544_26155 PF01970 Tripartite tricarboxylate transporter TctA family E2544_26165 PF00512 His Kinase A (phospho-acceptor) domain E2544_26165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2544_26170 PF00486 Transcriptional regulatory protein, C terminal E2544_26170 PF00072 Response regulator receiver domain E2544_26175 PF00293 NUDIX domain E2544_26180 PF03129 Anticodon binding domain E2544_26180 PF04073 Aminoacyl-tRNA editing domain E2544_26180 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E2544_26185 PF03061 Thioesterase superfamily E2544_26190 PF01618 MotA/TolQ/ExbB proton channel family E2544_26195 PF02472 Biopolymer transport protein ExbD/TolR E2544_26205 PF04052 TolB amino-terminal domain E2544_26205 PF07676 WD40-like Beta Propeller Repeat E2544_26210 PF00691 OmpA family E2544_26220 PF01032 FecCD transport family E2544_26225 PF00005 ABC transporter E2544_26240 PF01037 Lrp/AsnC ligand binding domain E2544_26250 PF00679 Elongation factor G C-terminus E2544_26250 PF03764 Elongation factor G, domain IV E2544_26250 PF00009 Elongation factor Tu GTP binding domain E2544_26250 PF14492 Elongation Factor G, domain II E2544_26250 PF03144 Elongation factor Tu domain 2 E2544_26255 PF00582 Universal stress protein family E2544_26265 PF00155 Aminotransferase class I and II E2544_26265 PF00392 Bacterial regulatory proteins, gntR family E2544_26270 PF00892 EamA-like transporter family E2544_26275 PF01810 LysE type translocator E2544_26280 PF04172 LrgB-like family E2544_26285 PF03788 LrgA family E2544_26290 PF03466 LysR substrate binding domain E2544_26290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_26300 PF00701 Dihydrodipicolinate synthetase family E2544_26305 PF00005 ABC transporter E2544_26310 PF00005 ABC transporter E2544_26320 PF02653 Branched-chain amino acid transport system / permease component E2544_26340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_26340 PF03466 LysR substrate binding domain E2544_26360 PF00535 Glycosyl transferase family 2 E2544_26370 PF03616 Sodium/glutamate symporter E2544_26385 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 E2544_26405 PF00929 Exonuclease E2544_26410 PF00873 AcrB/AcrD/AcrF family E2544_26415 PF13533 Biotin-lipoyl like E2544_26420 PF00075 RNase H E2544_26425 PF08241 Methyltransferase domain E2544_26435 PF01464 Transglycosylase SLT domain E2544_26435 PF01476 LysM domain E2544_26440 PF00291 Pyridoxal-phosphate dependent enzyme E2544_26440 PF00585 C-terminal regulatory domain of Threonine dehydratase E2544_26445 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family E2544_26450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_26450 PF03466 LysR substrate binding domain E2544_26470 PF03401 Tripartite tricarboxylate transporter family receptor E2544_26475 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain E2544_26475 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain E2544_26490 PF03466 LysR substrate binding domain E2544_26490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_26495 PF03401 Tripartite tricarboxylate transporter family receptor E2544_26515 PF04293 SpoVR like protein E2544_26520 PF04285 Protein of unknown function (DUF444) E2544_26525 PF06798 PrkA serine protein kinase C-terminal domain E2544_26525 PF08298 PrkA AAA domain E2544_26540 PF01872 RibD C-terminal domain E2544_26540 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region E2544_26550 PF12833 Helix-turn-helix domain E2544_26555 PF03477 ATP cone domain E2544_26560 PF00464 Serine hydroxymethyltransferase E2544_26565 PF01810 LysE type translocator E2544_26570 PF01161 Phosphatidylethanolamine-binding protein E2544_26575 PF00579 tRNA synthetases class I (W and Y) E2544_26575 PF01479 S4 domain E2544_26580 PF08460 Bacterial SH3 domain E2544_26580 PF01551 Peptidase family M23 E2544_26585 PF03702 Anhydro-N-acetylmuramic acid kinase E2544_26590 PF01521 Iron-sulphur cluster biosynthesis E2544_26600 PF02774 Semialdehyde dehydrogenase, dimerisation domain E2544_26600 PF01118 Semialdehyde dehydrogenase, NAD binding domain E2544_26605 PF00380 Ribosomal protein S9/S16 E2544_26610 PF00572 Ribosomal protein L13 E2544_26615 PF00005 ABC transporter E2544_26620 PF12399 Branched-chain amino acid ATP-binding cassette transporter E2544_26620 PF00005 ABC transporter E2544_26625 PF02653 Branched-chain amino acid transport system / permease component E2544_26625 PF11862 Domain of unknown function (DUF3382) E2544_26630 PF02653 Branched-chain amino acid transport system / permease component E2544_26635 PF13458 Periplasmic binding protein E2544_26640 PF03480 Bacterial extracellular solute-binding protein, family 7 E2544_26645 PF01523 Putative modulator of DNA gyrase E2544_26650 PF04751 Protein of unknown function (DUF615) E2544_26655 PF02230 Phospholipase/Carboxylesterase E2544_26665 PF00005 ABC transporter E2544_26670 PF00528 Binding-protein-dependent transport system inner membrane component E2544_26675 PF00857 Isochorismatase family E2544_26680 PF13607 Succinyl-CoA ligase like flavodoxin domain E2544_26680 PF00583 Acetyltransferase (GNAT) family E2544_26680 PF13380 CoA binding domain E2544_26685 PF00749 tRNA synthetases class I (E and Q), catalytic domain E2544_26700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_26700 PF03466 LysR substrate binding domain E2544_26710 PF03401 Tripartite tricarboxylate transporter family receptor E2544_26715 PF01037 Lrp/AsnC ligand binding domain E2544_26725 PF02867 Ribonucleotide reductase, barrel domain E2544_26725 PF03477 ATP cone domain E2544_26725 PF00317 Ribonucleotide reductase, all-alpha domain E2544_26730 PF00268 Ribonucleotide reductase, small chain E2544_26740 PF02325 YGGT family E2544_26745 PF00501 AMP-binding enzyme E2544_26745 PF13193 AMP-binding enzyme C-terminal domain E2544_26750 PF03062 MBOAT, membrane-bound O-acyltransferase family E2544_26775 PF00294 pfkB family carbohydrate kinase E2544_26775 PF01467 Cytidylyltransferase-like E2544_26790 PF00289 Biotin carboxylase, N-terminal domain E2544_26790 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain E2544_26790 PF02785 Biotin carboxylase C-terminal domain E2544_26795 PF00364 Biotin-requiring enzyme E2544_26800 PF01220 Dehydroquinase class II E2544_26805 PF08534 Redoxin E2544_26810 PF08245 Mur ligase middle domain E2544_26810 PF02875 Mur ligase family, glutamate ligase domain E2544_26810 PF01225 Mur ligase family, catalytic domain E2544_26815 PF05728 Uncharacterised protein family (UPF0227) E2544_26820 PF00773 RNB domain E2544_26825 PF00072 Response regulator receiver domain E2544_26825 PF00486 Transcriptional regulatory protein, C terminal E2544_26830 PF08521 Two-component sensor kinase N-terminal E2544_26830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2544_26830 PF00512 His Kinase A (phospho-acceptor) domain E2544_26840 PF00528 Binding-protein-dependent transport system inner membrane component E2544_26845 PF00005 ABC transporter E2544_26845 PF08402 TOBE domain E2544_26855 PF01488 Shikimate / quinate 5-dehydrogenase E2544_26855 PF18317 Shikimate 5'-dehydrogenase C-terminal domain E2544_26855 PF08501 Shikimate dehydrogenase substrate binding domain E2544_26860 PF00912 Transglycosylase E2544_26870 PF00149 Calcineurin-like phosphoesterase E2544_26875 PF00005 ABC transporter E2544_26880 PF00528 Binding-protein-dependent transport system inner membrane component E2544_26885 PF00528 Binding-protein-dependent transport system inner membrane component E2544_26890 PF00497 Bacterial extracellular solute-binding proteins, family 3 E2544_26900 PF03737 Aldolase/RraA E2544_26910 PF01553 Acyltransferase E2544_26915 PF01979 Amidohydrolase family E2544_26920 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain E2544_26920 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain E2544_26925 PF03652 Holliday junction resolvase E2544_26930 PF02622 Uncharacterized ACR, COG1678 E2544_26935 PF00301 Rubredoxin E2544_26940 PF08543 Phosphomethylpyrimidine kinase E2544_26940 PF02581 Thiamine monophosphate synthase E2544_26940 PF03070 TENA/THI-4/PQQC family E2544_26945 PF02581 Thiamine monophosphate synthase E2544_26950 PF00202 Aminotransferase class-III E2544_26955 PF01464 Transglycosylase SLT domain E2544_26970 PF00857 Isochorismatase family E2544_26975 PF00866 Ring hydroxylating beta subunit E2544_26980 PF00848 Ring hydroxylating alpha subunit (catalytic domain) E2544_26980 PF00355 Rieske [2Fe-2S] domain E2544_26985 PF01738 Dienelactone hydrolase family E2544_26995 PF12833 Helix-turn-helix domain E2544_26995 PF14525 AraC-binding-like domain E2544_27010 PF00501 AMP-binding enzyme E2544_27010 PF13193 AMP-binding enzyme C-terminal domain E2544_27015 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E2544_27015 PF02770 Acyl-CoA dehydrogenase, middle domain E2544_27015 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E2544_27020 PF00378 Enoyl-CoA hydratase/isomerase E2544_27030 PF01494 FAD binding domain E2544_27035 PF00990 Diguanylate cyclase, GGDEF domain E2544_27035 PF13426 PAS domain E2544_27035 PF00563 EAL domain E2544_27040 PF08448 PAS fold E2544_27040 PF00990 Diguanylate cyclase, GGDEF domain E2544_27045 PF09345 Domain of unknown function (DUF1987) E2544_27060 PF00005 ABC transporter E2544_27065 PF12399 Branched-chain amino acid ATP-binding cassette transporter E2544_27065 PF00005 ABC transporter E2544_27070 PF11862 Domain of unknown function (DUF3382) E2544_27070 PF02653 Branched-chain amino acid transport system / permease component E2544_27075 PF02653 Branched-chain amino acid transport system / permease component E2544_27095 PF01960 ArgJ family E2544_27105 PF00293 NUDIX domain E2544_27110 PF00005 ABC transporter E2544_27115 PF00005 ABC transporter E2544_27115 PF12399 Branched-chain amino acid ATP-binding cassette transporter E2544_27120 PF02653 Branched-chain amino acid transport system / permease component E2544_27130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_27130 PF03466 LysR substrate binding domain E2544_27135 PF13458 Periplasmic binding protein E2544_27140 PF01425 Amidase E2544_27145 PF03466 LysR substrate binding domain E2544_27145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_27160 PF02321 Outer membrane efflux protein E2544_27165 PF00873 AcrB/AcrD/AcrF family E2544_27170 PF00873 AcrB/AcrD/AcrF family E2544_27175 PF13533 Biotin-lipoyl like E2544_27185 PF07072 Cell division protein E2544_27190 PF01121 Dephospho-CoA kinase E2544_27195 PF06750 Bacterial Peptidase A24 N-terminal domain E2544_27195 PF01478 Type IV leader peptidase family E2544_27205 PF00072 Response regulator receiver domain E2544_27205 PF00196 Bacterial regulatory proteins, luxR family E2544_27210 PF02569 Pantoate-beta-alanine ligase E2544_27215 PF02616 Segregation and condensation protein ScpA E2544_27225 PF07690 Major Facilitator Superfamily E2544_27230 PF00370 FGGY family of carbohydrate kinases, N-terminal domain E2544_27230 PF02782 FGGY family of carbohydrate kinases, C-terminal domain E2544_27235 PF00920 Dehydratase family E2544_27245 PF08502 LeuA allosteric (dimerisation) domain E2544_27245 PF00682 HMGL-like E2544_27250 PF03466 LysR substrate binding domain E2544_27250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_27265 PF06508 Queuosine biosynthesis protein QueC E2544_27270 PF00311 Phosphoenolpyruvate carboxylase E2544_27275 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain E2544_27275 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain E2544_27280 PF02667 Short chain fatty acid transporter E2544_27290 PF01614 Bacterial transcriptional regulator E2544_27290 PF09339 IclR helix-turn-helix domain E2544_27295 PF01144 Coenzyme A transferase E2544_27300 PF01144 Coenzyme A transferase E2544_27315 PF12146 Serine aminopeptidase, S33 E2544_27325 PF02441 Flavoprotein E2544_27330 PF00462 Glutaredoxin E2544_27335 PF17827 PrmC N-terminal domain E2544_27335 PF05175 Methyltransferase small domain E2544_27340 PF00472 RF-1 domain E2544_27340 PF03462 PCRF domain E2544_27345 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain E2544_27345 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain E2544_27345 PF01488 Shikimate / quinate 5-dehydrogenase E2544_27355 PF00924 Mechanosensitive ion channel E2544_27355 PF12794 Mechanosensitive ion channel inner membrane domain 1 E2544_27355 PF12795 Mechanosensitive ion channel porin domain E2544_27365 PF00664 ABC transporter transmembrane region E2544_27365 PF00005 ABC transporter E2544_27375 PF04945 YHS domain E2544_27380 PF04542 Sigma-70 region 2 E2544_27380 PF08281 Sigma-70, region 4 E2544_27395 PF01037 Lrp/AsnC ligand binding domain E2544_27405 PF00892 EamA-like transporter family E2544_27415 PF03401 Tripartite tricarboxylate transporter family receptor E2544_27420 PF01261 Xylose isomerase-like TIM barrel E2544_27425 PF00682 HMGL-like E2544_27430 PF02515 CoA-transferase family III E2544_27435 PF00005 ABC transporter E2544_27440 PF00005 ABC transporter E2544_27440 PF12399 Branched-chain amino acid ATP-binding cassette transporter E2544_27445 PF02653 Branched-chain amino acid transport system / permease component E2544_27450 PF13458 Periplasmic binding protein E2544_27455 PF00732 GMC oxidoreductase E2544_27455 PF05199 GMC oxidoreductase E2544_27460 PF00171 Aldehyde dehydrogenase family E2544_27470 PF13458 Periplasmic binding protein E2544_27475 PF00364 Biotin-requiring enzyme E2544_27475 PF02817 e3 binding domain E2544_27475 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) E2544_27490 PF02779 Transketolase, pyrimidine binding domain E2544_27490 PF02780 Transketolase, C-terminal domain E2544_27500 PF00593 TonB dependent receptor E2544_27500 PF07715 TonB-dependent Receptor Plug Domain E2544_27510 PF07690 Major Facilitator Superfamily E2544_27515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_27515 PF03466 LysR substrate binding domain E2544_27520 PF07729 FCD domain E2544_27520 PF00392 Bacterial regulatory proteins, gntR family E2544_27525 PF07005 Sugar-binding N-terminal domain E2544_27525 PF17042 Nucleotide-binding C-terminal domain E2544_27530 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase E2544_27530 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase E2544_27535 PF01370 NAD dependent epimerase/dehydratase family E2544_27540 PF01261 Xylose isomerase-like TIM barrel E2544_27545 PF07690 Major Facilitator Superfamily E2544_27550 PF00596 Class II Aldolase and Adducin N-terminal domain E2544_27565 PF01040 UbiA prenyltransferase family E2544_27575 PF03401 Tripartite tricarboxylate transporter family receptor E2544_27580 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase E2544_27580 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase E2544_27585 PF02627 Carboxymuconolactone decarboxylase family E2544_27590 PF13458 Periplasmic binding protein E2544_27605 PF00005 ABC transporter E2544_27605 PF12399 Branched-chain amino acid ATP-binding cassette transporter E2544_27610 PF00005 ABC transporter E2544_27620 PF12697 Alpha/beta hydrolase family E2544_27620 PF08241 Methyltransferase domain E2544_27625 PF00753 Metallo-beta-lactamase superfamily E2544_27630 PF02492 CobW/HypB/UreG, nucleotide-binding domain E2544_27630 PF07683 Cobalamin synthesis protein cobW C-terminal domain E2544_27635 PF00857 Isochorismatase family E2544_27640 PF01979 Amidohydrolase family E2544_27645 PF00694 Aconitase C-terminal domain E2544_27645 PF00330 Aconitase family (aconitate hydratase) E2544_27650 PF07729 FCD domain E2544_27650 PF00392 Bacterial regulatory proteins, gntR family E2544_27670 PF03401 Tripartite tricarboxylate transporter family receptor E2544_27675 PF00593 TonB dependent receptor E2544_27675 PF07715 TonB-dependent Receptor Plug Domain E2544_27690 PF13492 GAF domain E2544_27690 PF07730 Histidine kinase E2544_27690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2544_27695 PF00196 Bacterial regulatory proteins, luxR family E2544_27695 PF00072 Response regulator receiver domain E2544_27700 PF00884 Sulfatase E2544_27700 PF16347 Domain of unknown function (DUF4976) E2544_27710 PF03401 Tripartite tricarboxylate transporter family receptor E2544_27715 PF03466 LysR substrate binding domain E2544_27715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_27720 PF00149 Calcineurin-like phosphoesterase E2544_27730 PF00348 Polyprenyl synthetase E2544_27740 PF01614 Bacterial transcriptional regulator E2544_27740 PF09339 IclR helix-turn-helix domain E2544_27745 PF00829 Ribosomal prokaryotic L21 protein E2544_27750 PF01016 Ribosomal L27 protein E2544_27755 PF01926 50S ribosome-binding GTPase E2544_27755 PF01018 GTP1/OBG E2544_27760 PF01472 PUA domain E2544_27760 PF00696 Amino acid kinase family E2544_27765 PF00486 Transcriptional regulatory protein, C terminal E2544_27765 PF00072 Response regulator receiver domain E2544_27775 PF07549 SecD/SecF GG Motif E2544_27775 PF02355 Protein export membrane protein E2544_27780 PF01964 Radical SAM ThiC family E2544_27780 PF13667 ThiC-associated domain E2544_27785 PF02913 FAD linked oxidases, C-terminal domain E2544_27785 PF01565 FAD binding domain E2544_27790 PF00392 Bacterial regulatory proteins, gntR family E2544_27790 PF07729 FCD domain E2544_27795 PF00563 EAL domain E2544_27795 PF03707 Bacterial signalling protein N terminal repeat E2544_27795 PF00990 Diguanylate cyclase, GGDEF domain E2544_27800 PF00899 ThiF family E2544_27805 PF03572 Peptidase family S41 E2544_27805 PF13180 PDZ domain E2544_27810 PF01551 Peptidase family M23 E2544_27815 PF00300 Histidine phosphatase superfamily (branch 1) E2544_27825 PF00462 Glutaredoxin E2544_27830 PF02556 Preprotein translocase subunit SecB E2544_27835 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus E2544_27835 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus E2544_27840 PF03401 Tripartite tricarboxylate transporter family receptor E2544_27845 PF00588 SpoU rRNA Methylase family E2544_27850 PF00156 Phosphoribosyl transferase domain E2544_27855 PF08241 Methyltransferase domain E2544_27860 PF04107 Glutamate-cysteine ligase family 2(GCS2) E2544_27865 PF02386 Cation transport protein E2544_27870 PF02254 TrkA-N domain E2544_27870 PF02080 TrkA-C domain E2544_27875 PF00158 Sigma-54 interaction domain E2544_27875 PF00072 Response regulator receiver domain E2544_27875 PF02954 Bacterial regulatory protein, Fis family E2544_27880 PF00672 HAMP domain E2544_27880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2544_27880 PF00512 His Kinase A (phospho-acceptor) domain E2544_27880 PF00989 PAS fold E2544_27890 PF01189 16S rRNA methyltransferase RsmB/F E2544_27890 PF01029 NusB family E2544_27895 PF01810 LysE type translocator E2544_27905 PF04055 Radical SAM superfamily E2544_27905 PF18693 TRAM domain E2544_27905 PF00919 Uncharacterized protein family UPF0004 E2544_27910 PF00893 Small Multidrug Resistance protein E2544_27915 PF01638 HxlR-like helix-turn-helix E2544_27925 PF03641 Possible lysine decarboxylase E2544_27935 PF13419 Haloacid dehalogenase-like hydrolase E2544_27945 PF02911 Formyl transferase, C-terminal domain E2544_27945 PF00551 Formyl transferase E2544_27950 PF01327 Polypeptide deformylase E2544_27955 PF02481 DNA recombination-mediator protein A E2544_27955 PF17782 DprA winged helix domain E2544_27960 PF00682 HMGL-like E2544_27970 PF00497 Bacterial extracellular solute-binding proteins, family 3 E2544_27975 PF00155 Aminotransferase class I and II E2544_27980 PF01168 Alanine racemase, N-terminal domain E2544_27995 PF09335 SNARE associated Golgi protein E2544_28000 PF00291 Pyridoxal-phosphate dependent enzyme E2544_28000 PF00585 C-terminal regulatory domain of Threonine dehydratase E2544_28005 PF13609 Gram-negative porin E2544_28015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_28015 PF03466 LysR substrate binding domain E2544_28020 PF00156 Phosphoribosyl transferase domain E2544_28025 PF00664 ABC transporter transmembrane region E2544_28025 PF00005 ABC transporter E2544_28030 PF00005 ABC transporter E2544_28030 PF00664 ABC transporter transmembrane region E2544_28035 PF08173 Membrane bound YbgT-like protein E2544_28040 PF02322 Cytochrome bd terminal oxidase subunit II E2544_28045 PF01654 Cytochrome bd terminal oxidase subunit I E2544_28055 PF02222 ATP-grasp domain E2544_28060 PF00571 CBS domain E2544_28060 PF01380 SIS domain E2544_28080 PF00005 ABC transporter E2544_28085 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein E2544_28090 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E2544_28095 PF02603 HPr Serine kinase N terminus E2544_28095 PF07475 HPr Serine kinase C-terminal domain E2544_28100 PF00392 Bacterial regulatory proteins, gntR family E2544_28100 PF00155 Aminotransferase class I and II E2544_28105 PF00034 Cytochrome c E2544_28105 PF13442 Cytochrome C oxidase, cbb3-type, subunit III E2544_28115 PF03668 P-loop ATPase protein family E2544_28120 PF03330 Lytic transglycolase E2544_28120 PF05036 Sporulation related domain E2544_28125 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain E2544_28125 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain E2544_28130 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E2544_28135 PF02021 Uncharacterised protein family UPF0102 E2544_28140 PF13580 SIS domain E2544_28145 PF04972 BON domain E2544_28150 PF00578 AhpC/TSA family E2544_28155 PF03180 NLPA lipoprotein E2544_28160 PF00696 Amino acid kinase family E2544_28170 PF00440 Bacterial regulatory proteins, tetR family E2544_28175 PF00939 Sodium:sulfate symporter transmembrane region E2544_28180 PF02615 Malate/L-lactate dehydrogenase E2544_28185 PF01098 Cell cycle protein E2544_28190 PF03717 Penicillin-binding Protein dimerisation domain E2544_28190 PF00905 Penicillin binding protein transpeptidase domain E2544_28200 PF04085 rod shape-determining protein MreC E2544_28210 PF02686 Glu-tRNAGln amidotransferase C subunit E2544_28215 PF01425 Amidase E2544_28220 PF02934 GatB/GatE catalytic domain E2544_28220 PF02637 GatB domain E2544_28230 PF00156 Phosphoribosyl transferase domain E2544_28235 PF03372 Endonuclease/Exonuclease/phosphatase family E2544_28240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_28240 PF03466 LysR substrate binding domain E2544_28245 PF01810 LysE type translocator E2544_28250 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain E2544_28250 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase E2544_28260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_28260 PF03466 LysR substrate binding domain E2544_28275 PF03466 LysR substrate binding domain E2544_28275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_28280 PF13458 Periplasmic binding protein E2544_28290 PF12399 Branched-chain amino acid ATP-binding cassette transporter E2544_28290 PF00005 ABC transporter E2544_28295 PF00005 ABC transporter E2544_28300 PF02566 OsmC-like protein E2544_28305 PF01047 MarR family E2544_28315 PF00501 AMP-binding enzyme E2544_28320 PF12399 Branched-chain amino acid ATP-binding cassette transporter E2544_28320 PF00005 ABC transporter E2544_28325 PF02653 Branched-chain amino acid transport system / permease component E2544_28340 PF00005 ABC transporter E2544_28345 PF00501 AMP-binding enzyme E2544_28345 PF14535 AMP-binding enzyme C-terminal domain E2544_28350 PF01925 Sulfite exporter TauE/SafE E2544_28365 PF04143 Sulphur transport E2544_28375 PF00753 Metallo-beta-lactamase superfamily E2544_28380 PF03976 Polyphosphate kinase 2 (PPK2) E2544_28385 PF13673 Acetyltransferase (GNAT) domain E2544_28395 PF13477 Glycosyl transferase 4-like E2544_28395 PF00534 Glycosyl transferases group 1 E2544_28405 PF06965 Na+/H+ antiporter 1 E2544_28410 PF04343 Protein of unknown function, DUF488 E2544_28420 PF08543 Phosphomethylpyrimidine kinase E2544_28420 PF03070 TENA/THI-4/PQQC family E2544_28420 PF02581 Thiamine monophosphate synthase E2544_28425 PF03167 Uracil DNA glycosylase superfamily E2544_28430 PF00271 Helicase conserved C-terminal domain E2544_28430 PF00270 DEAD/DEAH box helicase E2544_28440 PF12627 Probable RNA and SrmB- binding site of polymerase A E2544_28440 PF01743 Poly A polymerase head domain E2544_28445 PF14718 Soluble lytic murein transglycosylase L domain E2544_28445 PF01464 Transglycosylase SLT domain E2544_28450 PF01812 5-formyltetrahydrofolate cyclo-ligase family E2544_28455 PF14403 Circularly permuted ATP-grasp type 2 E2544_28465 PF08379 Bacterial transglutaminase-like N-terminal region E2544_28465 PF01841 Transglutaminase-like superfamily E2544_28475 PF03401 Tripartite tricarboxylate transporter family receptor E2544_28490 PF03328 HpcH/HpaI aldolase/citrate lyase family E2544_28495 PF02515 CoA-transferase family III E2544_28500 PF03401 Tripartite tricarboxylate transporter family receptor E2544_28505 PF02219 Methylenetetrahydrofolate reductase E2544_28510 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV E2544_28515 PF05221 S-adenosyl-L-homocysteine hydrolase E2544_28515 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain E2544_28520 PF13439 Glycosyltransferase Family 4 E2544_28520 PF00534 Glycosyl transferases group 1 E2544_28530 PF00561 alpha/beta hydrolase fold E2544_28535 PF00694 Aconitase C-terminal domain E2544_28540 PF00330 Aconitase family (aconitate hydratase) E2544_28545 PF03401 Tripartite tricarboxylate transporter family receptor E2544_28550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_28550 PF03466 LysR substrate binding domain E2544_28555 PF01613 Flavin reductase like domain E2544_28575 PF13458 Periplasmic binding protein E2544_28595 PF00083 Sugar (and other) transporter E2544_28600 PF01425 Amidase E2544_28605 PF00438 S-adenosylmethionine synthetase, N-terminal domain E2544_28605 PF02772 S-adenosylmethionine synthetase, central domain E2544_28605 PF02773 S-adenosylmethionine synthetase, C-terminal domain E2544_28620 PF01678 Diaminopimelate epimerase E2544_28630 PF02899 Phage integrase, N-terminal SAM-like domain E2544_28630 PF00589 Phage integrase family E2544_28635 PF03824 High-affinity nickel-transport protein E2544_28645 PF01297 Zinc-uptake complex component A periplasmic E2544_28650 PF00950 ABC 3 transport family E2544_28655 PF00005 ABC transporter E2544_28660 PF01475 Ferric uptake regulator family E2544_28665 PF07683 Cobalamin synthesis protein cobW C-terminal domain E2544_28665 PF02492 CobW/HypB/UreG, nucleotide-binding domain E2544_28670 PF01258 Prokaryotic dksA/traR C4-type zinc finger E2544_28675 PF00227 Proteasome subunit E2544_28680 PF07724 AAA domain (Cdc48 subfamily) E2544_28680 PF00004 ATPase family associated with various cellular activities (AAA) E2544_28690 PF01923 Cobalamin adenosyltransferase E2544_28695 PF16363 GDP-mannose 4,6 dehydratase E2544_28700 PF04321 RmlD substrate binding domain E2544_28705 PF00483 Nucleotidyl transferase E2544_28710 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase E2544_28715 PF04055 Radical SAM superfamily E2544_28715 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family E2544_28730 PF03099 Biotin/lipoate A/B protein ligase family E2544_28735 PF04359 Protein of unknown function (DUF493) E2544_28740 PF01063 Amino-transferase class IV E2544_28745 PF00768 D-alanyl-D-alanine carboxypeptidase E2544_28745 PF07943 Penicillin-binding protein 5, C-terminal domain E2544_28750 PF01965 DJ-1/PfpI family E2544_28775 PF00005 ABC transporter E2544_28780 PF02405 Permease MlaE E2544_28790 PF03309 Type III pantothenate kinase E2544_28800 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) E2544_28800 PF00534 Glycosyl transferases group 1 E2544_28805 PF01075 Glycosyltransferase family 9 (heptosyltransferase) E2544_28810 PF16363 GDP-mannose 4,6 dehydratase E2544_28815 PF00535 Glycosyl transferase family 2 E2544_28825 PF13439 Glycosyltransferase Family 4 E2544_28825 PF00534 Glycosyl transferases group 1 E2544_28830 PF08241 Methyltransferase domain E2544_28835 PF00005 ABC transporter E2544_28845 PF13439 Glycosyltransferase Family 4 E2544_28845 PF00534 Glycosyl transferases group 1 E2544_28865 PF00892 EamA-like transporter family E2544_28875 PF00953 Glycosyl transferase family 4 E2544_28890 PF07690 Major Facilitator Superfamily E2544_28895 PF00892 EamA-like transporter family E2544_28900 PF13091 PLD-like domain E2544_28905 PF03372 Endonuclease/Exonuclease/phosphatase family E2544_28910 PF02938 GAD domain E2544_28910 PF00152 tRNA synthetases class II (D, K and N) E2544_28910 PF01336 OB-fold nucleic acid binding domain E2544_28935 PF03401 Tripartite tricarboxylate transporter family receptor E2544_28940 PF00202 Aminotransferase class-III E2544_28955 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal E2544_28955 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III E2544_28970 PF00701 Dihydrodipicolinate synthetase family E2544_28975 PF13185 GAF domain E2544_28980 PF00155 Aminotransferase class I and II E2544_28985 PF01040 UbiA prenyltransferase family E2544_29005 PF00392 Bacterial regulatory proteins, gntR family E2544_29005 PF07729 FCD domain E2544_29010 PF01274 Malate synthase E2544_29040 PF00436 Single-strand binding protein family E2544_29045 PF07690 Major Facilitator Superfamily E2544_29050 PF17755 UvrA DNA-binding domain E2544_29050 PF17760 UvrA interaction domain E2544_29055 PF00043 Glutathione S-transferase, C-terminal domain E2544_29055 PF13417 Glutathione S-transferase, N-terminal domain E2544_29060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_29060 PF03466 LysR substrate binding domain E2544_29065 PF03401 Tripartite tricarboxylate transporter family receptor E2544_29070 PF01546 Peptidase family M20/M25/M40 E2544_29070 PF07687 Peptidase dimerisation domain E2544_29075 PF01966 HD domain E2544_29075 PF13286 Phosphohydrolase-associated domain E2544_29080 PF01761 3-dehydroquinate synthase E2544_29085 PF01202 Shikimate kinase E2544_29090 PF17092 Penicillin-binding protein OB-like domain E2544_29090 PF00912 Transglycosylase E2544_29090 PF00905 Penicillin binding protein transpeptidase domain E2544_29095 PF01491 Frataxin-like domain E2544_29100 PF13627 Prokaryotic lipoprotein-attachment site E2544_29105 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain E2544_29105 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain E2544_29125 PF13677 Membrane MotB of proton-channel complex MotA/MotB E2544_29125 PF00691 OmpA family E2544_29150 PF00004 ATPase family associated with various cellular activities (AAA) E2544_29150 PF07724 AAA domain (Cdc48 subfamily) E2544_29150 PF10431 C-terminal, D2-small domain, of ClpB protein E2544_29150 PF17871 AAA lid domain E2544_29200 PF04717 Type VI secretion system, phage-baseplate injector E2544_29230 PF05140 ResB-like family E2544_29240 PF01926 50S ribosome-binding GTPase E2544_29245 PF00490 Delta-aminolevulinic acid dehydratase E2544_29255 PF00005 ABC transporter E2544_29260 PF12399 Branched-chain amino acid ATP-binding cassette transporter E2544_29260 PF00005 ABC transporter E2544_29265 PF02653 Branched-chain amino acid transport system / permease component E2544_29270 PF13458 Periplasmic binding protein E2544_29290 PF02683 Cytochrome C biogenesis protein transmembrane region E2544_29290 PF11412 Disulphide bond corrector protein DsbC E2544_29295 PF03091 CutA1 divalent ion tolerance protein E2544_29300 PF01230 HIT domain E2544_29305 PF01196 Ribosomal protein L17 E2544_29310 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain E2544_29310 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain E2544_29310 PF01000 RNA polymerase Rpb3/RpoA insert domain E2544_29315 PF01479 S4 domain E2544_29315 PF00163 Ribosomal protein S4/S9 N-terminal domain E2544_29320 PF00411 Ribosomal protein S11 E2544_29325 PF00416 Ribosomal protein S13/S18 E2544_29330 PF00444 Ribosomal protein L36 E2544_29335 PF01176 Translation initiation factor 1A / IF-1 E2544_29340 PF00344 SecY translocase E2544_29345 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A E2544_29350 PF00327 Ribosomal protein L30p/L7e E2544_29355 PF00333 Ribosomal protein S5, N-terminal domain E2544_29355 PF03719 Ribosomal protein S5, C-terminal domain E2544_29360 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast E2544_29365 PF00347 Ribosomal protein L6 E2544_29370 PF00410 Ribosomal protein S8 E2544_29375 PF00253 Ribosomal protein S14p/S29e E2544_29380 PF00673 ribosomal L5P family C-terminus E2544_29380 PF00281 Ribosomal protein L5 E2544_29385 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 E2544_29390 PF00238 Ribosomal protein L14p/L23e E2544_29400 PF00171 Aldehyde dehydrogenase family E2544_29405 PF12833 Helix-turn-helix domain E2544_29405 PF14525 AraC-binding-like domain E2544_29420 PF00005 ABC transporter E2544_29445 PF00366 Ribosomal protein S17 E2544_29450 PF00831 Ribosomal L29 protein E2544_29455 PF00252 Ribosomal protein L16p/L10e E2544_29460 PF00189 Ribosomal protein S3, C-terminal domain E2544_29460 PF07650 KH domain E2544_29465 PF00237 Ribosomal protein L22p/L17e E2544_29470 PF00203 Ribosomal protein S19 E2544_29475 PF03947 Ribosomal Proteins L2, C-terminal domain E2544_29475 PF00181 Ribosomal Proteins L2, RNA binding domain E2544_29480 PF00276 Ribosomal protein L23 E2544_29485 PF00573 Ribosomal protein L4/L1 family E2544_29490 PF00297 Ribosomal protein L3 E2544_29495 PF00338 Ribosomal protein S10p/S20e E2544_29500 PF03143 Elongation factor Tu C-terminal domain E2544_29500 PF03144 Elongation factor Tu domain 2 E2544_29500 PF00009 Elongation factor Tu GTP binding domain E2544_29505 PF03144 Elongation factor Tu domain 2 E2544_29505 PF00009 Elongation factor Tu GTP binding domain E2544_29505 PF03764 Elongation factor G, domain IV E2544_29505 PF14492 Elongation Factor G, domain II E2544_29505 PF00679 Elongation factor G C-terminus E2544_29510 PF00177 Ribosomal protein S7p/S5e E2544_29515 PF00164 Ribosomal protein S12/S23 E2544_29520 PF00072 Response regulator receiver domain E2544_29520 PF00486 Transcriptional regulatory protein, C terminal E2544_29525 PF00072 Response regulator receiver domain E2544_29525 PF00486 Transcriptional regulatory protein, C terminal E2544_29535 PF00989 PAS fold E2544_29535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2544_29535 PF16736 Single Cache-like E2544_29535 PF00512 His Kinase A (phospho-acceptor) domain E2544_29550 PF05000 RNA polymerase Rpb1, domain 4 E2544_29550 PF04997 RNA polymerase Rpb1, domain 1 E2544_29550 PF04983 RNA polymerase Rpb1, domain 3 E2544_29550 PF04998 RNA polymerase Rpb1, domain 5 E2544_29550 PF00623 RNA polymerase Rpb1, domain 2 E2544_29555 PF04565 RNA polymerase Rpb2, domain 3 E2544_29555 PF04561 RNA polymerase Rpb2, domain 2 E2544_29555 PF10385 RNA polymerase beta subunit external 1 domain E2544_29555 PF00562 RNA polymerase Rpb2, domain 6 E2544_29555 PF04560 RNA polymerase Rpb2, domain 7 E2544_29555 PF04563 RNA polymerase beta subunit E2544_29560 PF00542 Ribosomal protein L7/L12 C-terminal domain E2544_29560 PF16320 Ribosomal protein L7/L12 dimerisation domain E2544_29565 PF00466 Ribosomal protein L10 E2544_29570 PF00687 Ribosomal protein L1p/L10e family E2544_29575 PF00298 Ribosomal protein L11, RNA binding domain E2544_29575 PF03946 Ribosomal protein L11, N-terminal domain E2544_29580 PF00467 KOW motif E2544_29580 PF02357 Transcription termination factor nusG E2544_29585 PF00584 SecE/Sec61-gamma subunits of protein translocation complex E2544_29595 PF03144 Elongation factor Tu domain 2 E2544_29595 PF00009 Elongation factor Tu GTP binding domain E2544_29595 PF03143 Elongation factor Tu C-terminal domain E2544_29615 PF00465 Iron-containing alcohol dehydrogenase E2544_29620 PF00171 Aldehyde dehydrogenase family E2544_29625 PF00120 Glutamine synthetase, catalytic domain E2544_29630 PF00459 Inositol monophosphatase family E2544_29640 PF00005 ABC transporter E2544_29650 PF08220 DeoR-like helix-turn-helix domain E2544_29650 PF00455 DeoR C terminal sensor domain E2544_29655 PF03401 Tripartite tricarboxylate transporter family receptor E2544_29665 PF01053 Cys/Met metabolism PLP-dependent enzyme E2544_29675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E2544_29675 PF03466 LysR substrate binding domain E2544_29680 PF17763 Glutaminase/Asparaginase C-terminal domain E2544_29680 PF00710 Asparaginase, N-terminal E2544_29685 PF17762 HTH domain found in ParB protein E2544_29685 PF02195 ParB-like nuclease domain E2544_29695 PF13614 AAA domain E2544_29700 PF02527 rRNA small subunit methyltransferase G E2544_29705 PF01134 Glucose inhibited division protein A E2544_29705 PF13932 GidA associated domain E2544_29715 PF00313 'Cold-shock' DNA-binding domain E2544_29720 PF05145 Transition state regulatory protein AbrB E2544_29725 PF00155 Aminotransferase class I and II E2544_29730 PF01970 Tripartite tricarboxylate transporter TctA family E2544_29745 PF00672 HAMP domain E2544_29745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E2544_29745 PF00512 His Kinase A (phospho-acceptor) domain E2544_29750 PF00486 Transcriptional regulatory protein, C terminal E2544_29750 PF00072 Response regulator receiver domain E2544_29755 PF00654 Voltage gated chloride channel E2544_29780 PF12631 MnmE helical domain E2544_29780 PF01926 50S ribosome-binding GTPase E2544_29780 PF10396 GTP-binding protein TrmE N-terminus E2544_29785 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E2544_29790 PF00528 Binding-protein-dependent transport system inner membrane component E2544_29795 PF00528 Binding-protein-dependent transport system inner membrane component E2544_29795 PF12911 N-terminal TM domain of oligopeptide transport permease C E2544_29800 PF00005 ABC transporter E2544_29800 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E2544_29805 PF00005 ABC transporter E2544_29805 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E2544_29810 PF01546 Peptidase family M20/M25/M40 E2544_29810 PF07687 Peptidase dimerisation domain E2544_29815 PF02668 Taurine catabolism dioxygenase TauD, TfdA family E2544_29825 PF00005 ABC transporter E2544_29830 PF00528 Binding-protein-dependent transport system inner membrane component E2544_29835 PF00199 Catalase E2544_29835 PF06628 Catalase-related immune-responsive E2544_29840 PF14849 YidC periplasmic domain E2544_29840 PF02096 60Kd inner membrane protein E2544_29845 PF01809 Putative membrane protein insertion efficiency factor E2544_29850 PF00825 Ribonuclease P E2544_29855 PF00468 Ribosomal protein L34