locus-tag	class	description
FOC84_00075	COG3077	Addiction module antitoxin, RelB DinJ family
FOC84_00080	COG3041	Addiction module toxin RelE StbE family
FOC84_00100	COG4962	Type ii secretion system protein e
FOC84_00105	COG3838	Conjugal transfer protein Trbc
FOC84_00110	COG5268	conjugation
FOC84_00115	COG3451	type IV secretory pathway VirB4
FOC84_00120	COG3701	Conjugal transfer protein
FOC84_00190	COG2433	Pfam Transposase IS66
FOC84_00215	COG0518	GMP synthase (glutamine-hydrolyzing) activity
FOC84_00215	COG0519	Catalyzes the synthesis of GMP from XMP
FOC84_00305	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
FOC84_00310	COG4569	acetaldehyde dehydrogenase (acetylating) activity
FOC84_00390	COG1802	Transcriptional regulator
FOC84_00415	COG0789	Transcriptional regulator
FOC84_00440	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
FOC84_00480	COG0129	dihydroxy-acid dehydratase activity
FOC84_00490	COG2226	methyltransferase
FOC84_00495	COG2226	methyltransferase
FOC84_00510	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FOC84_00515	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
FOC84_00540	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
FOC84_00560	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
FOC84_00565	COG1335	isochorismatase
FOC84_00570	COG2309	aminopeptidase activity
FOC84_00575	COG0596	Alpha beta hydrolase
FOC84_00600	COG0583	DNA-binding transcription factor activity
FOC84_00605	COG1250	3-hydroxyacyl-CoA dehydrogenase
FOC84_00610	COG3246	L-lysine catabolic process to acetate
FOC84_00620	COG5295	Hep Hag repeat protein
FOC84_00620	COG5295	Hep Hag repeat protein
FOC84_00625	COG0583	DNA-binding transcription factor activity
FOC84_00645	COG3043	anaerobic respiration
FOC84_00650	COG3005	denitrification pathway
FOC84_00655	COG4133	protoheme IX ABC transporter activity
FOC84_00675	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
FOC84_00685	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FOC84_00775	COG1028	Short-chain dehydrogenase reductase Sdr
FOC84_00790	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_00800	COG2186	Transcriptional regulator
FOC84_00830	COG1129	ABC transporter
FOC84_00835	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
FOC84_00845	COG1274	phosphoenolpyruvate carboxykinase (GTP) activity
FOC84_00850	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FOC84_00860	COG1028	Short-chain dehydrogenase reductase Sdr
FOC84_00865	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
FOC84_00880	COG0697	spore germination
FOC84_00885	COG0697	spore germination
FOC84_00905	COG1280	lysine exporter protein (LysE YggA)
FOC84_00920	COG1280	lysine exporter protein (LysE YggA)
FOC84_00925	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
FOC84_00930	COG3245	cytochrome
FOC84_00940	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FOC84_00960	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
FOC84_00970	COG0318	PFAM AMP-dependent synthetase and ligase
FOC84_00975	COG1960	acyl-CoA dehydrogenase activity
FOC84_00980	COG2814	Major facilitator Superfamily
FOC84_00995	COG0625	glutathione transferase activity
FOC84_01000	COG0583	DNA-binding transcription factor activity
FOC84_01005	COG0583	DNA-binding transcription factor activity
FOC84_01025	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_01030	COG3246	L-lysine catabolic process to acetate
FOC84_01045	COG0583	DNA-binding transcription factor activity
FOC84_01060	COG0506	proline dehydrogenase activity
FOC84_01065	COG0697	spore germination
FOC84_01070	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FOC84_01100	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FOC84_01105	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FOC84_01155	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FOC84_01165	COG1028	Short-chain dehydrogenase reductase Sdr
FOC84_01170	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FOC84_01180	COG1610	YqeY-like protein
FOC84_01220	COG5001	Diguanylate cyclase
FOC84_01220	COG3300	MHYT domain
FOC84_01225	COG0457	Tetratricopeptide repeat
FOC84_01230	COG1649	PFAM Uncharacterised BCR, COG1649
FOC84_01230	COG0726	polysaccharide deacetylase
FOC84_01235	COG1215	transferase activity, transferring glycosyl groups
FOC84_01245	COG2223	nitrite transmembrane transporter activity
FOC84_01250	COG4977	sequence-specific DNA binding
FOC84_01250	COG1917	Cupin 2, conserved barrel domain protein
FOC84_01260	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
FOC84_01275	COG0656	L-ascorbic acid biosynthetic process
FOC84_01280	COG5265	(ABC) transporter
FOC84_01295	COG0583	DNA-binding transcription factor activity
FOC84_01335	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_01370	COG1522	sequence-specific DNA binding
FOC84_01395	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_01405	COG0456	acetyltransferase
FOC84_01410	COG0384	phenazine biosynthesis protein PhzF
FOC84_01425	COG1733	regulation of RNA biosynthetic process
FOC84_01440	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FOC84_01445	COG0583	DNA-binding transcription factor activity
FOC84_01450	COG0129	dihydroxy-acid dehydratase activity
FOC84_01455	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_01460	COG1250	3-hydroxyacyl-CoA dehydrogenase
FOC84_01485	COG1473	amidohydrolase
FOC84_01520	COG0776	regulation of translation
FOC84_01525	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FOC84_01525	COG0072	phenylalanine-tRNA ligase activity
FOC84_01530	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
FOC84_01535	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
FOC84_01540	COG0291	Belongs to the bacterial ribosomal protein bL35 family
FOC84_01545	COG0606	chelatase, subunit chli
FOC84_01550	COG2960	long-chain fatty acid transporting porin activity
FOC84_01560	COG0347	Belongs to the P(II) protein family
FOC84_01565	COG0004	ammonium transporteR
FOC84_01570	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
FOC84_01575	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOC84_01590	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
FOC84_01595	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
FOC84_01605	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FOC84_01630	COG0601	transmembrane transport
FOC84_01635	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOC84_01640	COG4172	Belongs to the ABC transporter superfamily
FOC84_01660	COG1609	Transcriptional regulator
FOC84_01665	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
FOC84_01670	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
FOC84_01675	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FOC84_01680	COG0129	dihydroxy-acid dehydratase activity
FOC84_01690	COG0840	transmembrane signaling receptor activity
FOC84_01700	COG2199	diguanylate cyclase activity
FOC84_01700	COG2203	Gaf domain
FOC84_01710	COG0135	phosphoribosylanthranilate isomerase activity
FOC84_01715	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
FOC84_01720	COG0101	tRNA pseudouridine synthase activity
FOC84_01730	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
FOC84_01750	COG1538	Outer membrane efflux protein
FOC84_01765	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FOC84_01805	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
FOC84_01820	COG5002	protein histidine kinase activity
FOC84_01830	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
FOC84_01840	COG1295	ribonuclease BN
FOC84_01850	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FOC84_01880	COG4964	Belongs to the GSP D family
FOC84_01910	COG2030	dehydratase
FOC84_01915	COG1028	Short-chain dehydrogenase reductase Sdr
FOC84_01930	COG0439	Biotin carboxylase
FOC84_01935	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
FOC84_01940	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
FOC84_01985	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
FOC84_01995	COG0828	Belongs to the bacterial ribosomal protein bS21 family
FOC84_02000	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
FOC84_02005	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
FOC84_02010	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
FOC84_02015	COG0330	HflC and HflK could
FOC84_02020	COG0330	HflC and HflK could
FOC84_02025	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
FOC84_02030	COG1923	regulation of RNA biosynthetic process
FOC84_02035	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
FOC84_02040	COG1160	GTP binding
FOC84_02045	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FOC84_02050	COG2976	Protein conserved in bacteria
FOC84_02070	COG0820	rRNA (adenine-C2-)-methyltransferase activity
FOC84_02075	COG0105	UTP biosynthetic process
FOC84_02080	COG0525	valine-tRNA ligase activity
FOC84_02085	COG0336	Belongs to the RNA methyltransferase TrmD family
FOC84_02090	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
FOC84_02095	COG0228	four-way junction DNA binding
FOC84_02105	COG0425	Belongs to the sulfur carrier protein TusA family
FOC84_02110	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
FOC84_02160	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FOC84_02175	COG2076	Multidrug Resistance protein
FOC84_02180	COG1960	acyl-CoA dehydrogenase activity
FOC84_02185	COG0633	Ferredoxin
FOC84_02185	COG3217	Mosc domain protein beta barrel domain protein
FOC84_02190	COG5285	phytanoyl-CoA dioxygenase
FOC84_02195	COG0662	Cupin 2, conserved barrel domain protein
FOC84_02220	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FOC84_02225	COG2358	TRAP transporter, solute receptor (TAXI family
FOC84_02235	COG2311	Membrane
FOC84_02240	COG1309	transcriptional regulator
FOC84_02265	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
FOC84_02275	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
FOC84_02280	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
FOC84_02290	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC84_02315	COG1846	Transcriptional regulator
FOC84_02325	COG1566	PFAM secretion protein HlyD family protein
FOC84_02330	COG2814	Major facilitator Superfamily
FOC84_02340	COG0473	3-isopropylmalate dehydrogenase activity
FOC84_02345	COG0433	COG0433 Predicted ATPase
FOC84_02350	COG0217	transcriptional regulatory protein
FOC84_02355	COG0151	Belongs to the GarS family
FOC84_02365	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
FOC84_02370	COG0799	negative regulation of ribosome biogenesis
FOC84_02375	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
FOC84_02385	COG1301	dicarboxylic acid transport
FOC84_02390	COG4191	Histidine kinase
FOC84_02395	COG2204	response regulator
FOC84_02415	COG1530	ribonuclease E activity
FOC84_02450	COG5001	Diguanylate cyclase
FOC84_02450	COG4251	negative regulation of phosphorylation
FOC84_02450	COG3706	GGDEF domain
FOC84_02450	COG2203	Gaf domain
FOC84_02460	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
FOC84_02460	COG0475	glutathione-regulated potassium exporter activity
FOC84_02465	COG1132	(ABC) transporter
FOC84_02470	COG0859	PFAM glycosyl transferase family 9
FOC84_02490	COG0726	polysaccharide deacetylase
FOC84_02505	COG0726	polysaccharide deacetylase
FOC84_02510	COG0438	transferase activity, transferring glycosyl groups
FOC84_02525	COG1643	Atp-dependent helicase
FOC84_02530	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
FOC84_02530	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
FOC84_02535	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
FOC84_02545	COG0704	Plays a role in the regulation of phosphate uptake
FOC84_02555	COG1960	acyl-CoA dehydrogenase activity
FOC84_02585	COG1177	transmembrane transport
FOC84_02590	COG1176	ABC-type spermidine putrescine transport system, permease component I
FOC84_02595	COG3842	ATPase activity
FOC84_02605	COG3642	lipopolysaccharide core region biosynthetic process
FOC84_02615	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
FOC84_02620	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FOC84_02635	COG4608	Belongs to the ABC transporter superfamily
FOC84_02640	COG0444	Belongs to the ABC transporter superfamily
FOC84_02655	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOC84_02665	COG0747	negative chemotaxis
FOC84_02685	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
FOC84_02690	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
FOC84_02700	COG0765	amino acid transport
FOC84_02730	COG0583	DNA-binding transcription factor activity
FOC84_02735	COG0137	argininosuccinate synthase activity
FOC84_02740	COG3158	transport of potassium into the cell
FOC84_02745	COG0642	Histidine kinase
FOC84_02750	COG0745	RESPONSE REGULATOR receiver
FOC84_02775	COG0776	regulation of translation
FOC84_02780	COG3128	pkhd-type hydroxylase
FOC84_02790	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FOC84_02795	COG0557	exoribonuclease II activity
FOC84_02830	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
FOC84_02835	COG2391	methyltransferase activity
FOC84_02840	COG0069	glutamate synthase activity
FOC84_02865	COG2226	methyltransferase
FOC84_02890	COG0697	spore germination
FOC84_02950	COG3909	cytochrome
FOC84_02960	COG0625	glutathione transferase activity
FOC84_02965	COG0730	response to heat
FOC84_02970	COG0482	sulfurtransferase activity
FOC84_02975	COG0583	DNA-binding transcription factor activity
FOC84_03005	COG0247	lactate metabolic process
FOC84_03010	COG0277	FAD linked oxidase domain protein
FOC84_03015	COG0277	FAD linked oxidase domain protein
FOC84_03020	COG0277	FAD linked oxidase domain protein
FOC84_03025	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FOC84_03030	COG0312	modulator of DNA gyrase
FOC84_03045	COG0308	aminopeptidase N
FOC84_03050	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
FOC84_03070	COG0436	Aminotransferase
FOC84_03080	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
FOC84_03085	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
FOC84_03105	COG0559	Belongs to the binding-protein-dependent transport system permease family
FOC84_03135	COG1028	Short-chain dehydrogenase reductase Sdr
FOC84_03145	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
FOC84_03165	COG0181	hydroxymethylbilane synthase activity
FOC84_03170	COG0861	Integral membrane protein TerC family
FOC84_03175	COG0861	Integral membrane protein TerC family
FOC84_03180	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
FOC84_03185	COG0045	succinate-CoA ligase (ADP-forming) activity
FOC84_03200	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FOC84_03205	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
FOC84_03215	COG2137	regulation of response to DNA damage stimulus
FOC84_03220	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
FOC84_03230	COG0642	Histidine kinase
FOC84_03255	COG0540	Belongs to the ATCase OTCase family
FOC84_03305	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC84_03340	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
FOC84_03350	COG0305	Participates in initiation and elongation during chromosome replication
FOC84_03360	COG0359	binds to the 23S rRNA
FOC84_03365	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
FOC84_03370	COG2965	DNA replication, synthesis of RNA primer
FOC84_03375	COG0360	Binds together with S18 to 16S ribosomal RNA
FOC84_03380	COG3739	integral membrane protein
FOC84_03385	COG1469	GTP cyclohydrolase I activity
FOC84_03395	COG0142	geranyltranstransferase activity
FOC84_03400	COG1722	exodeoxyribonuclease VII activity
FOC84_03410	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_03425	COG0583	DNA-binding transcription factor activity
FOC84_03455	COG1840	ABC-type Fe3 transport system, periplasmic component
FOC84_03460	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FOC84_03470	COG3842	ATPase activity
FOC84_03495	COG0583	DNA-binding transcription factor activity
FOC84_03510	COG0501	Belongs to the peptidase M48B family
FOC84_03515	COG1760	l-serine dehydratase
FOC84_03520	COG1283	sodium-dependent phosphate transmembrane transporter activity
FOC84_03525	COG0412	Dienelactone hydrolase
FOC84_03530	COG0428	transporter
FOC84_03545	COG1473	amidohydrolase
FOC84_03560	COG1028	Short-chain dehydrogenase reductase Sdr
FOC84_03565	COG2271	Major facilitator Superfamily
FOC84_03580	COG0583	DNA-binding transcription factor activity
FOC84_03595	COG0583	DNA-binding transcription factor activity
FOC84_03610	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
FOC84_03615	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
FOC84_03620	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
FOC84_03625	COG2251	uridine kinase activity
FOC84_03625	COG0195	Participates in both transcription termination and antitermination
FOC84_03630	COG0779	Required for maturation of 30S ribosomal subunits
FOC84_03635	COG1187	pseudouridine synthase activity
FOC84_03640	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
FOC84_03650	COG0583	DNA-binding transcription factor activity
FOC84_03655	COG0523	cobalamin synthesis protein
FOC84_03670	COG0745	RESPONSE REGULATOR receiver
FOC84_03675	COG0642	Histidine kinase
FOC84_03680	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FOC84_03685	COG0625	glutathione transferase activity
FOC84_03690	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
FOC84_03695	COG1047	Peptidyl-prolyl cis-trans
FOC84_03700	COG2003	Belongs to the UPF0758 family
FOC84_03705	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
FOC84_03710	COG3483	tryptophan 2,3-dioxygenase activity
FOC84_03715	COG0254	rRNA binding
FOC84_03725	COG0534	Mate efflux family protein
FOC84_03735	COG2050	protein possibly involved in aromatic compounds catabolism
FOC84_03740	COG1024	Enoyl-CoA hydratase
FOC84_03745	COG1012	belongs to the aldehyde dehydrogenase family
FOC84_03750	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FOC84_03755	COG2151	metal-sulfur cluster biosynthetic enzyme
FOC84_03760	COG3396	Phenylacetate-CoA oxygenase
FOC84_03765	COG3460	Phenylacetate-CoA oxygenase
FOC84_03770	COG3396	Phenylacetate-CoA oxygenase
FOC84_03775	COG3327	negative regulation of DNA-templated transcription, initiation
FOC84_03780	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
FOC84_03805	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
FOC84_03810	COG0501	Belongs to the peptidase M48B family
FOC84_03815	COG1162	GTPase activity
FOC84_03825	COG0335	large ribosomal subunit rRNA binding
FOC84_03855	COG0175	sulfate reduction
FOC84_03860	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
FOC84_03865	COG4208	sulfate ABC transporter
FOC84_03870	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
FOC84_03875	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
FOC84_03880	COG0450	alkyl hydroperoxide reductase
FOC84_03885	COG1960	acyl-CoA dehydrogenase activity
FOC84_03900	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC84_03910	COG2985	domain, Protein
FOC84_03935	COG0123	including yeast histone deacetylase and acetoin utilization protein
FOC84_03940	COG2951	lytic endotransglycosylase activity
FOC84_03970	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FOC84_03975	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
FOC84_03980	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
FOC84_04005	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
FOC84_04010	COG0287	Prephenate dehydrogenase
FOC84_04015	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
FOC84_04025	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
FOC84_04040	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
FOC84_04070	COG1960	acyl-CoA dehydrogenase activity
FOC84_04080	COG2030	dehydratase
FOC84_04085	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_04095	COG1028	Short-chain dehydrogenase reductase Sdr
FOC84_04105	COG0045	succinate-CoA ligase (ADP-forming) activity
FOC84_04110	COG1960	acyl-CoA dehydrogenase activity
FOC84_04120	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC84_04125	COG1024	Enoyl-CoA hydratase
FOC84_04130	COG0583	DNA-binding transcription factor activity
FOC84_04135	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FOC84_04145	COG1028	Short-chain dehydrogenase reductase Sdr
FOC84_04150	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
FOC84_04160	COG1215	transferase activity, transferring glycosyl groups
FOC84_04180	COG2951	lytic endotransglycosylase activity
FOC84_04185	COG2833	Protein of unknown function (DUF455)
FOC84_04200	COG1132	(ABC) transporter
FOC84_04205	COG0189	ligase activity
FOC84_04205	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
FOC84_04210	COG0189	ligase activity
FOC84_04210	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
FOC84_04215	COG3237	CsbD-like
FOC84_04225	COG2823	Periplasmic or secreted lipoprotein
FOC84_04240	COG0672	)-iron permease
FOC84_04260	COG5394	Polyhydroxyalkanoate synthesis repressor PhaR
FOC84_04265	COG1028	Short-chain dehydrogenase reductase Sdr
FOC84_04270	COG3243	poly(R)-hydroxyalkanoic acid synthase
FOC84_04280	COG0564	pseudouridine synthase activity
FOC84_04300	COG1199	ATP-dependent helicase activity
FOC84_04305	COG2183	response to ionizing radiation
FOC84_04340	COG4774	siderophore transport
FOC84_04345	COG3712	iron ion homeostasis
FOC84_04350	COG1595	DNA-templated transcription, initiation
FOC84_04355	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
FOC84_04360	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FOC84_04365	COG0508	dehydrogenase complex catalyzes the overall conversion of
FOC84_04370	COG0567	Dehydrogenase, E1 component
FOC84_04375	COG1522	sequence-specific DNA binding
FOC84_04380	COG2515	1-aminocyclopropane-1-carboxylate deaminase
FOC84_04395	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FOC84_04400	COG1297	OPT oligopeptide transporter protein
FOC84_04410	COG0280	phosphate acetyltransferase
FOC84_04410	COG0281	malic enzyme
FOC84_04425	COG0372	Belongs to the citrate synthase family
FOC84_04430	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
FOC84_04435	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
FOC84_04440	COG1053	succinate dehydrogenase
FOC84_04445	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
FOC84_04450	COG2009	succinate dehydrogenase
FOC84_04455	COG2188	Transcriptional regulator
FOC84_04460	COG0039	L-malate dehydrogenase activity
FOC84_04510	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FOC84_04520	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
FOC84_04535	COG0148	phosphopyruvate hydratase activity
FOC84_04545	COG0504	CTP synthase activity
FOC84_04580	COG0747	negative chemotaxis
FOC84_04585	COG4172	Belongs to the ABC transporter superfamily
FOC84_04590	COG1446	asparaginase
FOC84_04600	COG2153	protein acetylation
FOC84_04625	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
FOC84_04655	COG0747	negative chemotaxis
FOC84_04675	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
FOC84_04680	COG0697	spore germination
FOC84_04685	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FOC84_04695	COG3193	protein, possibly involved in utilization of glycolate and propanediol
FOC84_04700	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FOC84_04705	COG0791	NLP P60 protein
FOC84_04715	COG0583	DNA-binding transcription factor activity
FOC84_04740	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
FOC84_04760	COG0667	Aldo Keto reductase
FOC84_04780	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
FOC84_04790	COG1381	Involved in DNA repair and RecF pathway recombination
FOC84_04795	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
FOC84_04800	COG0571	ribonuclease III activity
FOC84_04805	COG0681	Belongs to the peptidase S26 family
FOC84_04815	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FOC84_04840	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FOC84_04845	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FOC84_04855	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
FOC84_04860	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FOC84_04865	COG0416	fatty acid biosynthetic process
FOC84_04870	COG0333	Belongs to the bacterial ribosomal protein bL32 family
FOC84_04875	COG1399	metal-binding, possibly nucleic acid-binding protein
FOC84_04880	COG0424	maF-like protein
FOC84_04890	COG3023	N-Acetylmuramoyl-L-alanine amidase
FOC84_04895	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
FOC84_04900	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
FOC84_04915	COG1530	ribonuclease E activity
FOC84_04925	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FOC84_04930	COG2721	sulfolactate sulfo-lyase activity
FOC84_04935	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_04940	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
FOC84_04945	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
FOC84_04950	COG0159	tryptophan synthase activity
FOC84_04960	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FOC84_04970	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
FOC84_04975	COG3228	Belongs to the MtfA family
FOC84_04980	COG0655	NAD(P)H dehydrogenase (quinone) activity
FOC84_04985	COG0251	oxidation-reduction process
FOC84_04990	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
FOC84_04995	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
FOC84_05010	COG2878	Part of a membrane complex involved in electron transport
FOC84_05015	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
FOC84_05050	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FOC84_05075	COG0559	Belongs to the binding-protein-dependent transport system permease family
FOC84_05095	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
FOC84_05105	COG0183	Belongs to the thiolase family
FOC84_05115	COG1024	Enoyl-CoA hydratase
FOC84_05115	COG1250	3-hydroxyacyl-CoA dehydrogenase
FOC84_05120	COG0511	ligase activity, forming carbon-carbon bonds
FOC84_05125	COG0439	Biotin carboxylase
FOC84_05150	COG2084	Dehydrogenase
FOC84_05155	COG1414	Transcriptional regulator
FOC84_05190	COG1268	BioY protein
FOC84_05195	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
FOC84_05200	COG1122	ATPase activity
FOC84_05205	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FOC84_05210	COG2917	probably involved in intracellular septation
FOC84_05220	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FOC84_05225	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
FOC84_05230	COG2175	clavaminate synthase activity
FOC84_05245	COG1414	Transcriptional regulator
FOC84_05250	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
FOC84_05260	COG1196	nuclear chromosome segregation
FOC84_05265	COG0477	Major facilitator Superfamily
FOC84_05270	COG1573	uracil-dna glycosylase
FOC84_05275	COG1214	PFAM Peptidase M22, glycoprotease
FOC84_05280	COG0745	RESPONSE REGULATOR receiver
FOC84_05285	COG2205	protein histidine kinase activity
FOC84_05290	COG0450	alkyl hydroperoxide reductase
FOC84_05295	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FOC84_05305	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
FOC84_05310	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
FOC84_05315	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
FOC84_05320	COG0560	Phosphoserine phosphatase
FOC84_05325	COG4774	siderophore transport
FOC84_05335	COG1007	ATP synthesis coupled electron transport
FOC84_05350	COG0713	ATP synthesis coupled electron transport
FOC84_05360	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FOC84_05365	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
FOC84_05370	COG1034	ATP synthesis coupled electron transport
FOC84_05380	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
FOC84_05385	COG0649	NAD binding
FOC84_05390	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FOC84_05395	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FOC84_05400	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FOC84_05405	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FOC84_05425	COG0671	phosphoesterase, PA-phosphatase related
FOC84_05430	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
FOC84_05450	COG0583	DNA-binding transcription factor activity
FOC84_05455	COG1309	transcriptional regulator
FOC84_05460	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FOC84_05465	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FOC84_05485	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FOC84_05490	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FOC84_05495	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FOC84_05505	COG1309	transcriptional regulator
FOC84_05515	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FOC84_05570	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_05575	COG0747	negative chemotaxis
FOC84_05605	COG2354	Protein conserved in bacteria
FOC84_05610	COG3813	Protein conserved in bacteria
FOC84_05615	COG2846	Di-iron-containing protein involved in the repair of iron-sulfur clusters
FOC84_05620	COG3604	Transcriptional regulator
FOC84_05630	COG0604	alcohol dehydrogenase
FOC84_05640	COG0583	DNA-binding transcription factor activity
FOC84_05645	COG0508	dehydrogenase complex catalyzes the overall conversion of
FOC84_05655	COG0022	dehydrogenase e1 component
FOC84_05655	COG0508	dehydrogenase complex catalyzes the overall conversion of
FOC84_05670	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FOC84_05675	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FOC84_05690	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
FOC84_05700	COG1609	Transcriptional regulator
FOC84_05710	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FOC84_05715	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FOC84_05720	COG1028	Short-chain dehydrogenase reductase Sdr
FOC84_05730	COG1802	Transcriptional regulator
FOC84_05745	COG0747	negative chemotaxis
FOC84_05755	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOC84_05760	COG4172	Belongs to the ABC transporter superfamily
FOC84_05780	COG3119	arylsulfatase activity
FOC84_05790	COG1028	Short-chain dehydrogenase reductase Sdr
FOC84_05795	COG2851	Citrate transporter
FOC84_05835	COG0318	PFAM AMP-dependent synthetase and ligase
FOC84_05885	COG4206	TonB-dependent receptor
FOC84_05885	COG1629	transport
FOC84_05905	COG1595	DNA-templated transcription, initiation
FOC84_05910	COG3712	iron ion homeostasis
FOC84_05915	COG4774	siderophore transport
FOC84_05920	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC84_05925	COG0697	spore germination
FOC84_05950	COG0820	rRNA (adenine-C2-)-methyltransferase activity
FOC84_05965	COG3706	GGDEF domain
FOC84_05965	COG4251	negative regulation of phosphorylation
FOC84_05965	COG2203	Gaf domain
FOC84_05965	COG5001	Diguanylate cyclase
FOC84_06005	COG2271	Major facilitator Superfamily
FOC84_06010	COG3048	D-serine ammonia-lyase activity
FOC84_06015	COG0583	DNA-binding transcription factor activity
FOC84_06030	COG1116	anion transmembrane transporter activity
FOC84_06055	COG1971	Probably functions as a manganese efflux pump
FOC84_06095	COG1595	DNA-templated transcription, initiation
FOC84_06115	COG1802	Transcriptional regulator
FOC84_06125	COG0154	amidase activity
FOC84_06130	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC84_06135	COG1024	Enoyl-CoA hydratase
FOC84_06160	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
FOC84_06180	COG0251	oxidation-reduction process
FOC84_06190	COG0747	negative chemotaxis
FOC84_06195	COG0601	transmembrane transport
FOC84_06200	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOC84_06205	COG0444	Belongs to the ABC transporter superfamily
FOC84_06210	COG4608	Belongs to the ABC transporter superfamily
FOC84_06215	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
FOC84_06235	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
FOC84_06255	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC84_06260	COG2030	dehydratase
FOC84_06265	COG0183	Belongs to the thiolase family
FOC84_06270	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC84_06275	COG1028	Short-chain dehydrogenase reductase Sdr
FOC84_06285	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_06295	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_06305	COG5383	Protein conserved in bacteria
FOC84_06310	COG0583	DNA-binding transcription factor activity
FOC84_06335	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
FOC84_06345	COG0647	UMP catabolic process
FOC84_06350	COG1737	Transcriptional regulator
FOC84_06355	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
FOC84_06360	COG0149	triose-phosphate isomerase activity
FOC84_06365	COG0604	alcohol dehydrogenase
FOC84_06365	COG3321	synthase
FOC84_06375	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FOC84_06380	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC84_06385	COG2010	Cytochrome c
FOC84_06395	COG1648	precorrin-2 dehydrogenase activity
FOC84_06395	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
FOC84_06435	COG1648	precorrin-2 dehydrogenase activity
FOC84_06435	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
FOC84_06445	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
FOC84_06455	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC84_06480	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FOC84_06560	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FOC84_06570	COG1185	polyribonucleotide nucleotidyltransferase activity
FOC84_06575	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
FOC84_06585	COG1183	phosphatidylcholine synthase activity
FOC84_06590	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
FOC84_06595	COG0440	acetolactate synthase activity
FOC84_06600	COG0028	Belongs to the TPP enzyme family
FOC84_06605	COG1289	transmembrane transporter activity
FOC84_06610	COG3022	response to hydroperoxide
FOC84_06615	COG1028	Short-chain dehydrogenase reductase Sdr
FOC84_06630	COG2963	transposase activity
FOC84_06645	COG3916	Acyl-homoserine-lactone synthase
FOC84_06675	COG3008	intermembrane lipid transfer
FOC84_06675	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
FOC84_06680	COG2995	paraquat-inducible protein a
FOC84_06685	COG2995	paraquat-inducible protein a
FOC84_06705	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FOC84_06710	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FOC84_06715	COG0477	Major facilitator Superfamily
FOC84_06725	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FOC84_06740	COG4943	cyclic-guanylate-specific phosphodiesterase activity
FOC84_06750	COG4948	Mandelate Racemase Muconate Lactonizing
FOC84_06785	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
FOC84_06790	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
FOC84_06795	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FOC84_06810	COG0601	transmembrane transport
FOC84_06830	COG1737	Transcriptional regulator
FOC84_06835	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
FOC84_06845	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
FOC84_06850	COG1674	ftsk spoiiie
FOC84_06855	COG0492	ferredoxin-NADP+ reductase activity
FOC84_06860	COG1193	negative regulation of DNA recombination
FOC84_06880	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FOC84_06895	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
FOC84_06900	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
FOC84_06905	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
FOC84_06910	COG2205	protein histidine kinase activity
FOC84_06915	COG0745	RESPONSE REGULATOR receiver
FOC84_06930	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FOC84_06935	COG0840	transmembrane signaling receptor activity
FOC84_06965	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
FOC84_06985	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOC84_06990	COG0612	Peptidase, M16
FOC84_07000	COG0484	heat shock protein binding
FOC84_07005	COG0443	Heat shock 70 kDa protein
FOC84_07015	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
FOC84_07025	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
FOC84_07030	COG1420	regulation of RNA biosynthetic process
FOC84_07040	COG0497	DNA recombination
FOC84_07045	COG0735	belongs to the Fur family
FOC84_07050	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FOC84_07060	COG0812	UDP-N-acetylmuramate dehydrogenase activity
FOC84_07080	COG0753	catalase activity
FOC84_07090	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_07095	COG0583	DNA-binding transcription factor activity
FOC84_07120	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
FOC84_07125	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
FOC84_07175	COG2205	protein histidine kinase activity
FOC84_07175	COG0784	Response regulator, receiver
FOC84_07180	COG2199	diguanylate cyclase activity
FOC84_07180	COG2202	Pas domain
FOC84_07180	COG2200	EAL domain
FOC84_07185	COG0784	Response regulator, receiver
FOC84_07185	COG2205	protein histidine kinase activity
FOC84_07245	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FOC84_07270	COG0583	DNA-binding transcription factor activity
FOC84_07280	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
FOC84_07285	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
FOC84_07290	COG0167	dihydroorotate dehydrogenase activity
FOC84_07305	COG1414	Transcriptional regulator
FOC84_07310	COG1058	Belongs to the CinA family
FOC84_07310	COG1546	Belongs to the CinA family
FOC84_07325	COG0513	Belongs to the DEAD box helicase family
FOC84_07360	COG4783	chaperone-mediated protein folding
FOC84_07375	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FOC84_07380	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
FOC84_07395	COG0006	proline dipeptidase activity
FOC84_07405	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FOC84_07425	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
FOC84_07430	COG0632	four-way junction helicase activity
FOC84_07435	COG1090	epimerase
FOC84_07445	COG2255	four-way junction helicase activity
FOC84_07455	COG0745	RESPONSE REGULATOR receiver
FOC84_07465	COG0514	ATP-dependent DNA helicase (RecQ)
FOC84_07475	COG1271	oxidase subunit
FOC84_07480	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
FOC84_07485	COG0850	regulation of cytokinetic process
FOC84_07490	COG2894	cell division
FOC84_07495	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
FOC84_07510	COG0488	(ABC) transporter
FOC84_07530	COG4608	Belongs to the ABC transporter superfamily
FOC84_07535	COG0444	Belongs to the ABC transporter superfamily
FOC84_07540	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOC84_07550	COG0747	negative chemotaxis
FOC84_07580	COG4638	Rieske (2fe-2S)
FOC84_07585	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
FOC84_07605	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
FOC84_07610	COG1028	Short-chain dehydrogenase reductase Sdr
FOC84_07635	COG0463	Glycosyl transferase, family 2
FOC84_07635	COG1216	Glycosyl transferase, family 2
FOC84_07660	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
FOC84_07695	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
FOC84_07700	COG1024	Enoyl-CoA hydratase
FOC84_07720	COG1538	Outer membrane efflux protein
FOC84_07725	COG1136	(ABC) transporter
FOC84_07725	COG0577	efflux transmembrane transporter activity
FOC84_07730	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FOC84_07745	COG0259	pyridoxamine-phosphate oxidase activity
FOC84_07750	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FOC84_07755	COG0579	oxidoreductase
FOC84_07765	COG0659	secondary active sulfate transmembrane transporter activity
FOC84_07770	COG0583	DNA-binding transcription factor activity
FOC84_07775	COG1960	acyl-CoA dehydrogenase activity
FOC84_07785	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC84_07790	COG0405	Gamma-glutamyltransferase
FOC84_07800	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_07810	COG0114	fumarate hydratase activity
FOC84_07815	COG0802	atpase or kinase
FOC84_07820	COG0860	N-Acetylmuramoyl-L-alanine amidase
FOC84_07825	COG0586	Pfam SNARE associated Golgi protein
FOC84_07830	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
FOC84_07835	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
FOC84_07840	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
FOC84_07855	COG0617	tRNA 3'-terminal CCA addition
FOC84_07865	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FOC84_07870	COG2301	Belongs to the HpcH HpaI aldolase family
FOC84_07880	COG3777	bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
FOC84_07885	COG0583	DNA-binding transcription factor activity
FOC84_07890	COG1024	Enoyl-CoA hydratase
FOC84_07895	COG1960	acyl-CoA dehydrogenase activity
FOC84_07900	COG1960	acyl-CoA dehydrogenase activity
FOC84_07915	COG0318	PFAM AMP-dependent synthetase and ligase
FOC84_07935	COG0583	DNA-binding transcription factor activity
FOC84_07940	COG1028	Short-chain dehydrogenase reductase Sdr
FOC84_07945	COG2030	dehydratase
FOC84_07950	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC84_07960	COG1024	Enoyl-CoA hydratase
FOC84_07965	COG0752	glycyl-tRNA synthetase alpha subunit
FOC84_07970	COG0751	glycine-tRNA ligase activity
FOC84_07975	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
FOC84_07980	COG0204	Acyl-transferase
FOC84_08000	COG0242	peptide deformylase activity
FOC84_08005	COG1960	acyl-CoA dehydrogenase activity
FOC84_08010	COG0700	Nucleoside recognition
FOC84_08015	COG0469	pyruvate kinase activity
FOC84_08020	COG1929	Belongs to the glycerate kinase type-1 family
FOC84_08025	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
FOC84_08030	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FOC84_08045	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
FOC84_08055	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FOC84_08070	COG2154	pterin-4-alpha-carbinolamine dehydratase
FOC84_08090	COG0436	Aminotransferase
FOC84_08100	COG1522	sequence-specific DNA binding
FOC84_08110	COG1595	DNA-templated transcription, initiation
FOC84_08130	COG1028	Short-chain dehydrogenase reductase Sdr
FOC84_08145	COG2982	Protein involved in outer membrane biogenesis
FOC84_08150	COG1368	sulfuric ester hydrolase activity
FOC84_08155	COG2818	Glycosylase
FOC84_08175	COG0735	belongs to the Fur family
FOC84_08200	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_08255	COG3706	GGDEF domain
FOC84_08260	COG0840	transmembrane signaling receptor activity
FOC84_08275	COG2011	ABC-type metal ion transport system permease component
FOC84_08280	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
FOC84_08285	COG1501	Belongs to the glycosyl hydrolase 31 family
FOC84_08290	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FOC84_08290	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
FOC84_08300	COG0318	PFAM AMP-dependent synthetase and ligase
FOC84_08305	COG1473	amidohydrolase
FOC84_08315	COG2855	membrane
FOC84_08325	COG2239	Acts as a magnesium transporter
FOC84_08340	COG1522	sequence-specific DNA binding
FOC84_08345	COG0300	oxidoreductase activity
FOC84_08355	COG0028	Belongs to the TPP enzyme family
FOC84_08360	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_08375	COG0653	protein targeting
FOC84_08380	COG0739	heme binding
FOC84_08390	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
FOC84_08395	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
FOC84_08405	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
FOC84_08410	COG1181	Belongs to the D-alanine--D-alanine ligase family
FOC84_08415	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
FOC84_08420	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
FOC84_08430	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
FOC84_08435	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
FOC84_08440	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
FOC84_08450	COG3116	cell division
FOC84_08455	COG0275	rRNA processing
FOC84_08460	COG2001	Belongs to the MraZ family
FOC84_08475	COG0418	dihydroorotase activity
FOC84_08480	COG1473	amidohydrolase
FOC84_08540	COG1522	sequence-specific DNA binding
FOC84_08550	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FOC84_08555	COG4654	Cytochrome c, class I
FOC84_08560	COG0129	dihydroxy-acid dehydratase activity
FOC84_08605	COG2084	Dehydrogenase
FOC84_08610	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
FOC84_08620	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FOC84_08655	COG0824	Thioesterase
FOC84_08660	COG0811	peptide transport
FOC84_08665	COG0848	biopolymer transport protein
FOC84_08675	COG0823	Involved in the tonB-independent uptake of proteins
FOC84_08690	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOC84_08695	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
FOC84_08705	COG0596	Alpha beta hydrolase
FOC84_08705	COG0508	dehydrogenase complex catalyzes the overall conversion of
FOC84_08710	COG1522	sequence-specific DNA binding
FOC84_08720	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
FOC84_08735	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC84_08740	COG0697	spore germination
FOC84_08750	COG1346	cytolysis
FOC84_08760	COG0583	DNA-binding transcription factor activity
FOC84_08770	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FOC84_08775	COG1129	ABC transporter
FOC84_08810	COG0583	DNA-binding transcription factor activity
FOC84_08825	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
FOC84_08830	COG0463	Glycosyl transferase, family 2
FOC84_08840	COG0786	glutamate:sodium symporter activity
FOC84_08855	COG1671	Belongs to the UPF0178 family
FOC84_08885	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FOC84_08890	COG1566	PFAM secretion protein HlyD family protein
FOC84_08895	COG0328	RNA-DNA hybrid ribonuclease activity
FOC84_08900	COG2226	methyltransferase
FOC84_08905	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOC84_08910	COG0741	lytic transglycosylase activity
FOC84_08910	COG1388	LysM domain
FOC84_08920	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FOC84_08925	COG3608	succinylglutamate desuccinylase aspartoacylase
FOC84_08950	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_08975	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_08990	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FOC84_08995	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FOC84_09015	COG0251	oxidation-reduction process
FOC84_09025	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FOC84_09125	COG2719	SpoVR family
FOC84_09130	COG2718	Belongs to the UPF0229 family
FOC84_09135	COG2766	serine protein kinase
FOC84_09150	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FOC84_09150	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FOC84_09160	COG2207	Transcriptional regulator
FOC84_09165	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
FOC84_09170	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
FOC84_09175	COG1881	PFAM PEBP family protein
FOC84_09180	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
FOC84_09195	COG0316	Belongs to the HesB IscA family
FOC84_09205	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
FOC84_09210	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
FOC84_09215	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
FOC84_09230	COG4177	L-phenylalanine transmembrane transporter activity
FOC84_09235	COG0559	Belongs to the binding-protein-dependent transport system permease family
FOC84_09245	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
FOC84_09250	COG0312	modulator of DNA gyrase
FOC84_09255	COG3028	Belongs to the UPF0307 family
FOC84_09270	COG1116	anion transmembrane transporter activity
FOC84_09275	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FOC84_09280	COG1335	isochorismatase
FOC84_09285	COG0045	succinate-CoA ligase (ADP-forming) activity
FOC84_09285	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOC84_09285	COG1042	CoA-binding domain protein
FOC84_09290	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
FOC84_09295	COG0477	Major facilitator Superfamily
FOC84_09305	COG0583	DNA-binding transcription factor activity
FOC84_09315	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_09320	COG1522	sequence-specific DNA binding
FOC84_09350	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FOC84_09355	COG1696	Membrane protein involved in D-alanine export
FOC84_09380	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
FOC84_09380	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
FOC84_09390	COG2264	protein methyltransferase activity
FOC84_09395	COG0439	Biotin carboxylase
FOC84_09400	COG0511	ligase activity, forming carbon-carbon bonds
FOC84_09405	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
FOC84_09410	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FOC84_09415	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
FOC84_09420	COG3150	esterase
FOC84_09425	COG0557	exoribonuclease II activity
FOC84_09430	COG0745	RESPONSE REGULATOR receiver
FOC84_09435	COG0642	Histidine kinase
FOC84_09445	COG1175	transmembrane transport
FOC84_09460	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
FOC84_09465	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FOC84_09475	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
FOC84_09490	COG0540	Belongs to the ATCase OTCase family
FOC84_09495	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
FOC84_09500	COG1678	Uncharacterized ACR, COG1678
FOC84_09515	COG0352	thiamine-phosphate diphosphorylase activity
FOC84_09520	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
FOC84_09525	COG0741	lytic transglycosylase activity
FOC84_09535	COG1028	Short-chain dehydrogenase reductase Sdr
FOC84_09540	COG1335	isochorismatase
FOC84_09545	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
FOC84_09550	COG4638	Rieske (2fe-2S)
FOC84_09590	COG1024	Enoyl-CoA hydratase
FOC84_09595	COG1028	Short-chain dehydrogenase reductase Sdr
FOC84_09625	COG0625	glutathione transferase activity
FOC84_09630	COG0077	Prephenate dehydratase
FOC84_09630	COG1605	Chorismate mutase
FOC84_09640	COG2081	HI0933 family
FOC84_09645	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FOC84_09665	COG1129	ABC transporter
FOC84_09685	COG1126	abc transporter atp-binding protein
FOC84_09690	COG0765	amino acid transport
FOC84_09695	COG4597	amino acid ABC transporter
FOC84_09700	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC84_09705	COG2884	Cell division ATP-binding protein ftsE
FOC84_09710	COG2177	Part of the ABC transporter FtsEX involved in
FOC84_09725	COG4502	5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)
FOC84_09735	COG2186	Transcriptional regulator
FOC84_09745	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
FOC84_09775	COG1028	Short-chain dehydrogenase reductase Sdr
FOC84_09780	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
FOC84_09790	COG0508	dehydrogenase complex catalyzes the overall conversion of
FOC84_09795	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FOC84_09800	COG0583	DNA-binding transcription factor activity
FOC84_09810	COG1194	a g-specific adenine glycosylase
FOC84_09825	COG0028	Belongs to the TPP enzyme family
FOC84_09830	COG1802	Transcriptional regulator
FOC84_09840	COG2226	methyltransferase
FOC84_09860	COG0288	reversible hydration of carbon dioxide
FOC84_09865	COG1028	Short-chain dehydrogenase reductase Sdr
FOC84_09870	COG1802	Transcriptional regulator
FOC84_09875	COG1028	Short-chain dehydrogenase reductase Sdr
FOC84_09885	COG0559	Belongs to the binding-protein-dependent transport system permease family
FOC84_09920	COG0625	glutathione transferase activity
FOC84_09935	COG0583	DNA-binding transcription factor activity
FOC84_09955	COG1414	Transcriptional regulator
FOC84_09965	COG0318	PFAM AMP-dependent synthetase and ligase
FOC84_09980	COG4771	TonB-dependent receptor
FOC84_09985	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FOC84_09990	COG2022	thiamine diphosphate biosynthetic process
FOC84_09995	COG0351	phosphomethylpyrimidine kinase
FOC84_10010	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
FOC84_10020	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
FOC84_10035	COG2226	methyltransferase
FOC84_10040	COG0745	RESPONSE REGULATOR receiver
FOC84_10055	COG0642	Histidine kinase
FOC84_10065	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FOC84_10070	COG0583	DNA-binding transcription factor activity
FOC84_10080	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
FOC84_10085	COG1984	allophanate hydrolase subunit 2
FOC84_10095	COG1802	Transcriptional regulator
FOC84_10100	COG2860	membrane
FOC84_10110	COG2223	nitrite transmembrane transporter activity
FOC84_10115	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
FOC84_10115	COG2813	Specifically methylates the guanine in position
FOC84_10125	COG2188	Transcriptional regulator
FOC84_10130	COG2721	sulfolactate sulfo-lyase activity
FOC84_10135	COG2721	sulfolactate sulfo-lyase activity
FOC84_10145	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FOC84_10150	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
FOC84_10160	COG2197	response regulator
FOC84_10175	COG2918	glutathione biosynthetic process
FOC84_10195	COG0583	DNA-binding transcription factor activity
FOC84_10205	COG1802	Transcriptional regulator
FOC84_10235	COG0179	Fumarylacetoacetate (FAA) hydrolase
FOC84_10275	COG1595	DNA-templated transcription, initiation
FOC84_10285	COG0583	DNA-binding transcription factor activity
FOC84_10290	COG1764	response to oxidative stress
FOC84_10330	COG2197	response regulator
FOC84_10335	COG0784	Response regulator, receiver
FOC84_10335	COG2205	protein histidine kinase activity
FOC84_10355	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FOC84_10365	COG0789	Transcriptional regulator
FOC84_10370	COG0633	Ferredoxin
FOC84_10380	COG0667	Aldo Keto reductase
FOC84_10385	COG1172	Belongs to the binding-protein-dependent transport system permease family
FOC84_10400	COG1070	Carbohydrate kinase
FOC84_10405	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
FOC84_10410	COG2188	Transcriptional regulator
FOC84_10415	COG3093	addiction module antidote protein HigA
FOC84_10480	COG2015	COG2015, Alkyl sulfatase and related hydrolases
FOC84_10490	COG0346	lactoylglutathione lyase activity
FOC84_10500	COG0798	PFAM Bile acid sodium symporter
FOC84_10515	COG0431	NADPH-dependent FMN reductase
FOC84_10540	COG0405	Gamma-glutamyltransferase
FOC84_10545	COG0814	amino acid
FOC84_10555	COG1522	sequence-specific DNA binding
FOC84_10600	COG3621	Patatin-like phospholipase
FOC84_10625	COG3093	addiction module antidote protein HigA
FOC84_10675	COG1522	sequence-specific DNA binding
FOC84_10680	COG5001	Diguanylate cyclase
FOC84_10745	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_10765	COG0583	DNA-binding transcription factor activity
FOC84_10775	COG0523	cobalamin synthesis protein
FOC84_10790	COG1250	3-hydroxyacyl-CoA dehydrogenase
FOC84_10795	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC84_10805	COG1309	transcriptional regulator
FOC84_10815	COG1024	Enoyl-CoA hydratase
FOC84_10820	COG1024	Enoyl-CoA hydratase
FOC84_10825	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
FOC84_10835	COG0747	negative chemotaxis
FOC84_10840	COG0583	DNA-binding transcription factor activity
FOC84_10850	COG4166	transmembrane transport
FOC84_10855	COG0601	transmembrane transport
FOC84_10865	COG0444	Belongs to the ABC transporter superfamily
FOC84_10870	COG4608	Belongs to the ABC transporter superfamily
FOC84_10880	COG2195	Cleaves the N-terminal amino acid of tripeptides
FOC84_10890	COG2171	N-acyltransferase activity
FOC84_10900	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
FOC84_10905	COG0210	DNA helicase
FOC84_10910	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
FOC84_10915	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
FOC84_10925	COG0355	proton-transporting ATP synthase activity, rotational mechanism
FOC84_10930	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
FOC84_10935	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
FOC84_10940	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
FOC84_10945	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
FOC84_10960	COG0356	it plays a direct role in the translocation of protons across the membrane
FOC84_10975	COG1024	Enoyl-CoA hydratase
FOC84_10985	COG0583	DNA-binding transcription factor activity
FOC84_10990	COG3473	Maleate cis-trans isomerase
FOC84_11015	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FOC84_11035	COG0559	Belongs to the binding-protein-dependent transport system permease family
FOC84_11040	COG0683	leucine binding
FOC84_11050	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
FOC84_11065	COG0037	tRNA processing
FOC84_11070	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FOC84_11080	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FOC84_11085	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
FOC84_11090	COG2967	ApaG domain
FOC84_11095	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
FOC84_11100	COG0546	phosphoglycolate phosphatase activity
FOC84_11110	COG0512	Glutamine amidotransferase of anthranilate synthase
FOC84_11120	COG0134	indole-3-glycerol-phosphate synthase activity
FOC84_11140	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC84_11145	COG1250	3-hydroxyacyl-CoA dehydrogenase
FOC84_11145	COG1024	Enoyl-CoA hydratase
FOC84_11165	COG3284	Transcriptional regulator
FOC84_11170	COG1012	belongs to the aldehyde dehydrogenase family
FOC84_11205	COG0709	Synthesizes selenophosphate from selenide and ATP
FOC84_11210	COG1305	Transglutaminase-like
FOC84_11225	COG3276	selenocysteine insertion sequence binding
FOC84_11230	COG1921	L-seryl-tRNASec selenium transferase activity
FOC84_11240	COG2864	formate dehydrogenase
FOC84_11245	COG0437	4 iron, 4 sulfur cluster binding
FOC84_11260	COG1607	acyl-coa hydrolase
FOC84_11285	COG3064	Membrane
FOC84_11290	COG3585	molybdate ion transport
FOC84_11300	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FOC84_11305	COG0431	NADPH-dependent FMN reductase
FOC84_11315	COG0543	2 iron, 2 sulfur cluster binding
FOC84_11315	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FOC84_11330	COG3069	C4-dicarboxylate transmembrane transporter activity
FOC84_11340	COG1802	Transcriptional regulator
FOC84_11390	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
FOC84_11395	COG1473	amidohydrolase
FOC84_11400	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_11405	COG0583	DNA-binding transcription factor activity
FOC84_11415	COG2814	Major facilitator Superfamily
FOC84_11425	COG1228	amidohydrolase
FOC84_11435	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
FOC84_11465	COG0737	Belongs to the 5'-nucleotidase family
FOC84_11470	COG0438	transferase activity, transferring glycosyl groups
FOC84_11480	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
FOC84_11485	COG0218	Necessary for normal cell division and for the maintenance of normal septation
FOC84_11495	COG2423	ornithine cyclodeaminase activity
FOC84_11500	COG1522	sequence-specific DNA binding
FOC84_11510	COG2423	ornithine cyclodeaminase activity
FOC84_11515	COG0583	DNA-binding transcription factor activity
FOC84_11520	COG0656	L-ascorbic acid biosynthetic process
FOC84_11535	COG0861	Integral membrane protein TerC family
FOC84_11540	COG0589	response to stress
FOC84_11540	COG0475	glutathione-regulated potassium exporter activity
FOC84_11560	COG3246	L-lysine catabolic process to acetate
FOC84_11575	COG1764	response to oxidative stress
FOC84_11580	COG2814	Major facilitator Superfamily
FOC84_11595	COG4783	chaperone-mediated protein folding
FOC84_11595	COG1560	Kdo2-lipid A biosynthetic process
FOC84_11620	COG0438	transferase activity, transferring glycosyl groups
FOC84_11625	COG0457	Tetratricopeptide repeat
FOC84_11640	COG1522	sequence-specific DNA binding
FOC84_11655	COG2814	Major facilitator Superfamily
FOC84_11660	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
FOC84_11680	COG1999	signal sequence binding
FOC84_11690	COG1612	heme a metabolic process
FOC84_11720	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
FOC84_11740	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
FOC84_11765	COG0070	glutamate synthase
FOC84_11765	COG0067	glutamate synthase
FOC84_11765	COG0069	glutamate synthase activity
FOC84_11780	COG0583	DNA-binding transcription factor activity
FOC84_11785	COG0477	Major facilitator Superfamily
FOC84_11795	COG2070	2-Nitropropane dioxygenase
FOC84_11800	COG1127	ABC transporter
FOC84_11805	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
FOC84_11810	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
FOC84_11815	COG2853	Lipoprotein
FOC84_11825	COG1131	(ABC) transporter
FOC84_11830	COG0842	Transport permease protein
FOC84_11840	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
FOC84_11845	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
FOC84_11850	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
FOC84_11855	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
FOC84_11860	COG0131	Imidazoleglycerol-phosphate dehydratase
FOC84_11865	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
FOC84_11870	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
FOC84_11875	COG0107	imidazoleglycerol-phosphate synthase activity
FOC84_11885	COG0140	phosphoribosyl-ATP diphosphatase activity
FOC84_11890	COG0537	adenosine 5'-monophosphoramidase activity
FOC84_11895	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
FOC84_11900	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
FOC84_11915	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FOC84_11920	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
FOC84_11930	COG0477	Major facilitator Superfamily
FOC84_11940	COG0235	Class ii aldolase
FOC84_11945	COG1970	mechanosensitive ion channel activity
FOC84_11950	COG0723	plastoquinol--plastocyanin reductase activity
FOC84_11955	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
FOC84_11960	COG2857	Cytochrome c1
FOC84_11965	COG0625	glutathione transferase activity
FOC84_11970	COG2969	positive regulation of protein catabolic process
FOC84_11995	COG0583	DNA-binding transcription factor activity
FOC84_12005	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
FOC84_12015	COG2207	Transcriptional regulator
FOC84_12015	COG3708	Transcriptional regulator
FOC84_12025	COG1160	GTP binding
FOC84_12030	COG0747	negative chemotaxis
FOC84_12035	COG0601	transmembrane transport
FOC84_12040	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOC84_12045	COG4172	Belongs to the ABC transporter superfamily
FOC84_12055	COG5339	Protein conserved in bacteria
FOC84_12060	COG0513	Belongs to the DEAD box helicase family
FOC84_12065	COG1280	lysine exporter protein (LysE YggA)
FOC84_12070	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
FOC84_12090	COG0583	DNA-binding transcription factor activity
FOC84_12100	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
FOC84_12110	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
FOC84_12115	COG0154	amidase activity
FOC84_12120	COG1609	Transcriptional regulator
FOC84_12125	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
FOC84_12130	COG3842	ATPase activity
FOC84_12135	COG1653	transport
FOC84_12140	COG1175	transmembrane transport
FOC84_12145	COG0395	ABC-type sugar transport system, permease component
FOC84_12160	COG0018	arginyl-trna synthetase
FOC84_12170	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
FOC84_12200	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_12215	COG1742	UPF0060 membrane protein
FOC84_12220	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_12225	COG1473	amidohydrolase
FOC84_12230	COG1960	acyl-CoA dehydrogenase activity
FOC84_12235	COG4579	[isocitrate dehydrogenase (NADP+)] phosphatase activity
FOC84_12240	COG0183	Belongs to the thiolase family
FOC84_12245	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
FOC84_12280	COG0583	DNA-binding transcription factor activity
FOC84_12315	COG0583	DNA-binding transcription factor activity
FOC84_12320	COG2957	Belongs to the agmatine deiminase family
FOC84_12335	COG3339	Conserved Protein
FOC84_12360	COG4977	sequence-specific DNA binding
FOC84_12365	COG1595	DNA-templated transcription, initiation
FOC84_12370	COG3712	iron ion homeostasis
FOC84_12390	COG0110	maltose O-acetyltransferase activity
FOC84_12415	COG3422	double-strand break repair
FOC84_12430	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
FOC84_12465	COG2358	TRAP transporter, solute receptor (TAXI family
FOC84_12475	COG2922	Belongs to the Smg family
FOC84_12480	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
FOC84_12490	COG0551	DNA topoisomerase type I activity
FOC84_12490	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
FOC84_12505	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FOC84_12510	COG1028	Short-chain dehydrogenase reductase Sdr
FOC84_12515	COG0028	Belongs to the TPP enzyme family
FOC84_12520	COG1522	sequence-specific DNA binding
FOC84_12525	COG3781	membrane
FOC84_12540	COG2814	Major facilitator Superfamily
FOC84_12555	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FOC84_12570	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
FOC84_12575	COG0586	Pfam SNARE associated Golgi protein
FOC84_12585	COG1744	ABC transporter substrate-binding protein PnrA-like
FOC84_12605	COG0402	S-adenosylhomocysteine deaminase activity
FOC84_12620	COG1304	FMN binding
FOC84_12645	COG1126	abc transporter atp-binding protein
FOC84_12650	COG0765	amino acid transport
FOC84_12655	COG0765	amino acid transport
FOC84_12665	COG0583	DNA-binding transcription factor activity
FOC84_12670	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FOC84_12695	COG1917	Cupin 2, conserved barrel domain protein
FOC84_12700	COG0154	amidase activity
FOC84_12705	COG1126	abc transporter atp-binding protein
FOC84_12725	COG1574	metal-dependent hydrolase with the TIM-barrel fold
FOC84_12735	COG1741	Belongs to the pirin family
FOC84_12750	COG0583	DNA-binding transcription factor activity
FOC84_12770	COG1126	abc transporter atp-binding protein
FOC84_12775	COG0765	amino acid transport
FOC84_12780	COG0765	amino acid transport
FOC84_12805	COG0592	DNA-directed DNA polymerase activity
FOC84_12810	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
FOC84_12815	COG0230	Belongs to the bacterial ribosomal protein bL34 family
FOC84_12820	COG0594	ribonuclease P activity
FOC84_12825	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
FOC84_12835	COG0753	catalase activity
FOC84_12845	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
FOC84_12855	COG2175	clavaminate synthase activity
FOC84_12870	COG0179	Fumarylacetoacetate (FAA) hydrolase
FOC84_12880	COG1473	amidohydrolase
FOC84_12885	COG4608	Belongs to the ABC transporter superfamily
FOC84_12890	COG0444	Belongs to the ABC transporter superfamily
FOC84_12895	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOC84_12900	COG0601	transmembrane transport
FOC84_12910	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
FOC84_12935	COG0038	chloride channel
FOC84_12945	COG0642	Histidine kinase
FOC84_12965	COG0436	Aminotransferase
FOC84_12970	COG3180	Ammonia monooxygenase
FOC84_12975	COG1278	Cold shock
FOC84_12980	COG0445	tRNA wobble uridine modification
FOC84_12985	COG0357	Ribosomal RNA small subunit methyltransferase G
FOC84_12990	COG1192	Involved in chromosome partitioning
FOC84_13000	COG1475	DNA binding
FOC84_13005	COG0252	asparaginase activity
FOC84_13010	COG0583	DNA-binding transcription factor activity
FOC84_13035	COG1349	DNA-binding transcription factor activity
FOC84_13045	COG3842	ATPase activity
FOC84_13050	COG1840	ABC-type Fe3 transport system, periplasmic component
FOC84_13090	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
FOC84_13110	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
FOC84_13115	COG0081	regulation of translation
FOC84_13120	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
FOC84_13125	COG0222	ribosome binding
FOC84_13130	COG0085	RNA polymerase activity
FOC84_13135	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
FOC84_13150	COG5002	protein histidine kinase activity
FOC84_13165	COG0745	RESPONSE REGULATOR receiver
FOC84_13170	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
FOC84_13175	COG0049	tRNA binding
FOC84_13180	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
FOC84_13185	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
FOC84_13190	COG0051	transcription antitermination factor activity, RNA binding
FOC84_13195	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
FOC84_13205	COG0089	rRNA binding
FOC84_13210	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
FOC84_13215	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
FOC84_13220	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
FOC84_13225	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
FOC84_13230	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
FOC84_13235	COG0255	Belongs to the universal ribosomal protein uL29 family
FOC84_13240	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
FOC84_13285	COG2207	Transcriptional regulator
FOC84_13300	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
FOC84_13305	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
FOC84_13310	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
FOC84_13315	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
FOC84_13320	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
FOC84_13325	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
FOC84_13330	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
FOC84_13335	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
FOC84_13340	COG1841	ribosomal large subunit assembly
FOC84_13345	COG0200	Binds to the 23S rRNA
FOC84_13350	COG0201	protein transport
FOC84_13355	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
FOC84_13360	COG0257	Belongs to the bacterial ribosomal protein bL36 family
FOC84_13365	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
FOC84_13370	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
FOC84_13375	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
FOC84_13380	COG0202	RNA polymerase activity
FOC84_13385	COG0203	ribosomal protein L17
FOC84_13390	COG0537	adenosine 5'-monophosphoramidase activity
FOC84_13395	COG1324	tolerance protein
FOC84_13400	COG4232	protein-disulfide reductase activity
FOC84_13415	COG1028	Short-chain dehydrogenase reductase Sdr
FOC84_13450	COG0218	Necessary for normal cell division and for the maintenance of normal septation
FOC84_13465	COG1333	cytochrome c biogenesis protein
FOC84_13470	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FOC84_13475	COG0019	diaminopimelate decarboxylase activity
FOC84_13485	COG1965	Belongs to the frataxin family
FOC84_13495	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
FOC84_13500	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
FOC84_13505	COG0232	Belongs to the dGTPase family. Type 2 subfamily
FOC84_13510	COG1473	amidohydrolase
FOC84_13520	COG0583	DNA-binding transcription factor activity
FOC84_13535	COG2814	Major facilitator Superfamily
FOC84_13575	COG2186	Transcriptional regulator
FOC84_13580	COG1063	alcohol dehydrogenase
FOC84_13600	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC84_13605	COG1956	GAF domain-containing protein
FOC84_13610	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FOC84_13625	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FOC84_13640	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FOC84_13670	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
FOC84_13675	COG3568	Endonuclease Exonuclease Phosphatase
FOC84_13705	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
FOC84_13710	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
FOC84_13715	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
FOC84_13725	COG2814	Major facilitator Superfamily
FOC84_13750	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
FOC84_13780	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
FOC84_13790	COG1086	Polysaccharide biosynthesis protein
FOC84_13805	COG0859	PFAM glycosyl transferase family 9
FOC84_13820	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
FOC84_13830	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
FOC84_13865	COG1686	Belongs to the peptidase S11 family
FOC84_13880	COG0321	lipoyl(octanoyl) transferase activity
FOC84_13890	COG1609	Transcriptional regulator
FOC84_13895	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
FOC84_13910	COG2096	Adenosyltransferase
FOC84_13920	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
FOC84_13925	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
FOC84_13935	COG0523	cobalamin synthesis protein
FOC84_13940	COG0735	belongs to the Fur family
FOC84_13955	COG0803	Belongs to the bacterial solute-binding protein 9 family
FOC84_13965	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
FOC84_13970	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
FOC84_13980	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
FOC84_13985	COG1560	Kdo2-lipid A biosynthetic process
FOC84_13995	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
FOC84_14000	COG0154	amidase activity
FOC84_14005	COG0477	Major facilitator Superfamily
FOC84_14015	COG0583	DNA-binding transcription factor activity
FOC84_14020	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_14030	COG0066	3-isopropylmalate dehydratase activity
FOC84_14045	COG0438	transferase activity, transferring glycosyl groups
FOC84_14050	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
FOC84_14055	COG1950	PFAM Membrane protein of
FOC84_14060	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
FOC84_14070	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC84_14075	COG2301	Belongs to the HpcH HpaI aldolase family
FOC84_14100	COG1305	Transglutaminase-like
FOC84_14110	COG2308	Evidence 4 Homologs of previously reported genes of
FOC84_14115	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
FOC84_14125	COG0617	tRNA 3'-terminal CCA addition
FOC84_14135	COG0513	Belongs to the DEAD box helicase family
FOC84_14140	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
FOC84_14160	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
FOC84_14165	COG1028	Short-chain dehydrogenase reductase Sdr
FOC84_14170	COG3189	MarR family transcriptional regulator
FOC84_14185	COG0297	glycogen (starch) synthase activity
FOC84_14195	COG0456	acetyltransferase
FOC84_14210	COG0640	Transcriptional regulator
FOC84_14230	COG0730	response to heat
FOC84_14275	COG1846	Transcriptional regulator
FOC84_14280	COG1764	response to oxidative stress
FOC84_14305	COG0583	DNA-binding transcription factor activity
FOC84_14320	COG0583	DNA-binding transcription factor activity
FOC84_14330	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
FOC84_14335	COG1280	lysine exporter protein (LysE YggA)
FOC84_14345	COG0708	Exodeoxyribonuclease III
FOC84_14350	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
FOC84_14365	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
FOC84_14370	COG0154	amidase activity
FOC84_14375	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
FOC84_14380	COG1077	Cell shape determining protein MreB Mrl
FOC84_14385	COG1792	Involved in formation and maintenance of cell shape
FOC84_14395	COG0768	penicillin binding
FOC84_14400	COG0772	Belongs to the SEDS family
FOC84_14405	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
FOC84_14410	COG0471	metal ion transport
FOC84_14415	COG1309	transcriptional regulator
FOC84_14425	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
FOC84_14435	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FOC84_14440	COG2823	Periplasmic or secreted lipoprotein
FOC84_14445	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
FOC84_14460	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FOC84_14470	COG1660	Displays ATPase and GTPase activities
FOC84_14485	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC84_14490	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
FOC84_14500	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
FOC84_14505	COG1137	ATPase activity
FOC84_14520	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
FOC84_14530	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
FOC84_14540	COG1271	oxidase subunit
FOC84_14545	COG1294	oxidase, subunit
FOC84_14555	COG4988	ABC transporter
FOC84_14560	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
FOC84_14565	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
FOC84_14580	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FOC84_14585	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FOC84_14590	COG1238	metal cluster binding
FOC84_14605	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
FOC84_14610	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC84_14615	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC84_14630	COG0758	DNA mediated transformation
FOC84_14635	COG0242	peptide deformylase activity
FOC84_14640	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
FOC84_14650	COG0546	phosphoglycolate phosphatase activity
FOC84_14665	COG1733	regulation of RNA biosynthetic process
FOC84_14675	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
FOC84_14685	COG5002	protein histidine kinase activity
FOC84_14710	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FOC84_14730	COG1280	lysine exporter protein (LysE YggA)
FOC84_14735	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
FOC84_14745	COG5000	phosphorelay sensor kinase activity
FOC84_14750	COG2204	response regulator
FOC84_14755	COG0569	domain protein
FOC84_14760	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
FOC84_14765	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
FOC84_14770	COG2226	methyltransferase
FOC84_14780	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
FOC84_14790	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
FOC84_14795	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
FOC84_14800	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
FOC84_14810	COG0588	phosphoglycerate mutase activity
FOC84_14815	COG4942	peptidase
FOC84_14820	COG0793	Belongs to the peptidase S41A family
FOC84_14825	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
FOC84_14835	COG2186	Transcriptional regulator
FOC84_14850	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FOC84_14865	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
FOC84_14870	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
FOC84_14875	COG0211	Belongs to the bacterial ribosomal protein bL27 family
FOC84_14880	COG0261	This protein binds to 23S rRNA in the presence of protein L20
FOC84_14885	COG1414	Transcriptional regulator
FOC84_14895	COG0142	geranyltranstransferase activity
FOC84_14905	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
FOC84_15010	COG0508	dehydrogenase complex catalyzes the overall conversion of
FOC84_15010	COG0596	Alpha beta hydrolase
FOC84_15020	COG1024	Enoyl-CoA hydratase
FOC84_15025	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
FOC84_15040	COG1846	Transcriptional regulator
FOC84_15045	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC84_15055	COG1060	Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate
FOC84_15060	COG1060	Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate
FOC84_15065	COG0391	Required for morphogenesis under gluconeogenic growth conditions
FOC84_15075	COG0778	Nitroreductase
FOC84_15075	COG1478	Catalyzes the GTP-dependent successive addition of multiple gamma-linked L-glutamates to the L-lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5-deazariboflavin (F420-0) to form polyglutamated F420 derivatives
FOC84_15105	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
FOC84_15120	COG1309	transcriptional regulator
FOC84_15130	COG2233	PERMEase
FOC84_15145	COG3119	arylsulfatase activity
FOC84_15160	COG1846	Transcriptional regulator
FOC84_15165	COG1024	Enoyl-CoA hydratase
FOC84_15170	COG0446	pyridine nucleotide-disulphide oxidoreductase
FOC84_15170	COG1902	pentaerythritol trinitrate reductase activity
FOC84_15175	COG1024	Enoyl-CoA hydratase
FOC84_15180	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_15190	COG1960	acyl-CoA dehydrogenase activity
FOC84_15210	COG0604	alcohol dehydrogenase
FOC84_15220	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC84_15230	COG0784	Response regulator, receiver
FOC84_15230	COG2205	protein histidine kinase activity
FOC84_15235	COG2197	response regulator
FOC84_15255	COG3121	Chaperone
FOC84_15260	COG3188	usher protein
FOC84_15265	COG3121	Chaperone
FOC84_15295	COG3539	Fimbrial protein
FOC84_15300	COG2198	Histidine kinase
FOC84_15300	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC84_15300	COG0784	Response regulator, receiver
FOC84_15300	COG2205	protein histidine kinase activity
FOC84_15305	COG2205	protein histidine kinase activity
FOC84_15305	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC84_15310	COG2197	response regulator
FOC84_15330	COG4585	Histidine kinase
FOC84_15350	COG4774	siderophore transport
FOC84_15360	COG1028	Short-chain dehydrogenase reductase Sdr
FOC84_15370	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
FOC84_15375	COG1802	Transcriptional regulator
FOC84_15380	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
FOC84_15385	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
FOC84_15390	COG1335	isochorismatase
FOC84_15395	COG0523	cobalamin synthesis protein
FOC84_15410	COG2188	Transcriptional regulator
FOC84_15435	COG0683	leucine binding
FOC84_15440	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FOC84_15445	COG2084	Dehydrogenase
FOC84_15450	COG0235	Class ii aldolase
FOC84_15455	COG3622	Belongs to the hyi family
FOC84_15460	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FOC84_15465	COG2084	Dehydrogenase
FOC84_15470	COG3395	kinase activity
FOC84_15475	COG2186	Transcriptional regulator
FOC84_15485	COG0583	DNA-binding transcription factor activity
FOC84_15495	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
FOC84_15520	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC84_15525	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
FOC84_15530	COG3622	Belongs to the hyi family
FOC84_15545	COG5006	permease, DMT superfamily
FOC84_15555	COG1522	sequence-specific DNA binding
FOC84_15570	COG1595	DNA-templated transcription, initiation
FOC84_15600	COG1132	(ABC) transporter
FOC84_15610	COG3264	Mechanosensitive ion channel
FOC84_15610	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
FOC84_15615	COG0583	DNA-binding transcription factor activity
FOC84_15625	COG1335	isochorismatase
FOC84_15640	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
FOC84_15645	COG2890	protein-(glutamine-N5) methyltransferase activity
FOC84_15650	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
FOC84_15665	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
FOC84_15675	COG4829	muconolactone delta-isomerase
FOC84_15680	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
FOC84_15690	COG1414	Transcriptional regulator
FOC84_15695	COG1028	Short-chain dehydrogenase reductase Sdr
FOC84_15700	COG2031	fatty acid transporter
FOC84_15705	COG1250	3-hydroxyacyl-CoA dehydrogenase
FOC84_15710	COG4774	siderophore transport
FOC84_15715	COG3712	iron ion homeostasis
FOC84_15720	COG1595	DNA-templated transcription, initiation
FOC84_15725	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
FOC84_15730	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
FOC84_15745	COG0583	DNA-binding transcription factor activity
FOC84_15750	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
FOC84_15760	COG0129	dihydroxy-acid dehydratase activity
FOC84_15770	COG0477	Major facilitator Superfamily
FOC84_15780	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
FOC84_15785	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
FOC84_15805	COG0237	dephospho-CoA kinase activity
FOC84_15810	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
FOC84_15825	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FOC84_15840	COG1028	Short-chain dehydrogenase reductase Sdr
FOC84_15845	COG0583	DNA-binding transcription factor activity
FOC84_15850	COG0154	amidase activity
FOC84_15855	COG0683	leucine binding
FOC84_15920	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
FOC84_15980	COG3706	GGDEF domain
FOC84_15985	COG2200	EAL domain
FOC84_15985	COG2202	Pas domain
FOC84_15985	COG2199	diguanylate cyclase activity
FOC84_16000	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FOC84_16005	COG0583	DNA-binding transcription factor activity
FOC84_16010	COG0628	permease
FOC84_16025	COG3121	Chaperone
FOC84_16030	COG3188	usher protein
FOC84_16045	COG0477	Major facilitator Superfamily
FOC84_16060	COG1695	Transcriptional regulator
FOC84_16120	COG0583	DNA-binding transcription factor activity
FOC84_16125	COG1028	Short-chain dehydrogenase reductase Sdr
FOC84_16135	COG3246	L-lysine catabolic process to acetate
FOC84_16140	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
FOC84_16145	COG1172	Belongs to the binding-protein-dependent transport system permease family
FOC84_16160	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FOC84_16185	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC84_16200	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
FOC84_16210	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FOC84_16225	COG4221	oxidoreductase activity
FOC84_16230	COG0583	DNA-binding transcription factor activity
FOC84_16255	COG2233	PERMEase
FOC84_16265	COG0326	Molecular chaperone. Has ATPase activity
FOC84_16270	COG1396	sequence-specific DNA binding
FOC84_16275	COG3550	peptidyl-serine autophosphorylation
FOC84_16285	COG0604	alcohol dehydrogenase
FOC84_16295	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_16320	COG2814	Major facilitator Superfamily
FOC84_16325	COG2271	Major facilitator Superfamily
FOC84_16330	COG4948	Mandelate Racemase Muconate Lactonizing
FOC84_16335	COG0800	Aldolase
FOC84_16340	COG3734	2-keto-3-deoxy-galactonokinase
FOC84_16345	COG1414	Transcriptional regulator
FOC84_16350	COG0625	glutathione transferase activity
FOC84_16365	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FOC84_16370	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
FOC84_16375	COG1652	LysM domain
FOC84_16395	COG0220	tRNA (guanine-N7-)-methyltransferase activity
FOC84_16405	COG1522	sequence-specific DNA binding
FOC84_16410	COG0583	DNA-binding transcription factor activity
FOC84_16415	COG0626	cystathionine gamma-synthase activity
FOC84_16420	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FOC84_16425	COG1028	Short-chain dehydrogenase reductase Sdr
FOC84_16440	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FOC84_16450	COG2207	Transcriptional regulator
FOC84_16455	COG2267	carboxylic ester hydrolase activity
FOC84_16470	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC84_16475	COG1960	acyl-CoA dehydrogenase activity
FOC84_16480	COG1960	acyl-CoA dehydrogenase activity
FOC84_16490	COG1028	Short-chain dehydrogenase reductase Sdr
FOC84_16495	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC84_16510	COG1960	acyl-CoA dehydrogenase activity
FOC84_16525	COG0410	ABC transporter
FOC84_16545	COG1024	Enoyl-CoA hydratase
FOC84_16560	COG2030	dehydratase
FOC84_16590	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
FOC84_16630	COG0318	PFAM AMP-dependent synthetase and ligase
FOC84_16635	COG0318	PFAM AMP-dependent synthetase and ligase
FOC84_16640	COG1309	transcriptional regulator
FOC84_16670	COG1028	Short-chain dehydrogenase reductase Sdr
FOC84_16675	COG1960	acyl-CoA dehydrogenase activity
FOC84_16680	COG1024	Enoyl-CoA hydratase
FOC84_16695	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_16705	COG2030	dehydratase
FOC84_16705	COG1012	belongs to the aldehyde dehydrogenase family
FOC84_16710	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FOC84_16720	COG1024	Enoyl-CoA hydratase
FOC84_16725	COG1024	Enoyl-CoA hydratase
FOC84_16735	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC84_16745	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC84_16750	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_16755	COG1028	Short-chain dehydrogenase reductase Sdr
FOC84_16775	COG1250	3-hydroxyacyl-CoA dehydrogenase
FOC84_16780	COG1250	3-hydroxyacyl-CoA dehydrogenase
FOC84_16790	COG1028	Short-chain dehydrogenase reductase Sdr
FOC84_16795	COG1024	Enoyl-CoA hydratase
FOC84_16800	COG0318	PFAM AMP-dependent synthetase and ligase
FOC84_16805	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
FOC84_16815	COG2204	response regulator
FOC84_16820	COG3279	Response regulator of the LytR AlgR family
FOC84_16825	COG2972	Histidine kinase
FOC84_16840	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
FOC84_16850	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FOC84_16855	COG0006	proline dipeptidase activity
FOC84_16870	COG1982	Orn Lys Arg decarboxylase major
FOC84_16880	COG0688	phosphatidylethanolamine metabolic process
FOC84_16885	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
FOC84_16915	COG0505	Belongs to the CarA family
FOC84_16925	COG0477	Major facilitator Superfamily
FOC84_16935	COG1802	Transcriptional regulator
FOC84_16940	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_16950	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FOC84_16965	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
FOC84_16980	COG3135	benzoate transporter
FOC84_16990	COG2072	flavoprotein involved in K transport
FOC84_16995	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_17000	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
FOC84_17015	COG0583	DNA-binding transcription factor activity
FOC84_17020	COG0165	Argininosuccinate lyase
FOC84_17030	COG0785	Cytochrome C biogenesis protein
FOC84_17035	COG4235	cytochrome complex assembly
FOC84_17040	COG3088	subunit of a heme lyase
FOC84_17045	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FOC84_17070	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FOC84_17075	COG4133	protoheme IX ABC transporter activity
FOC84_17105	COG0438	transferase activity, transferring glycosyl groups
FOC84_17150	COG3284	Transcriptional regulator
FOC84_17155	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_17160	COG2267	carboxylic ester hydrolase activity
FOC84_17170	COG0583	DNA-binding transcription factor activity
FOC84_17175	COG0583	DNA-binding transcription factor activity
FOC84_17185	COG3706	GGDEF domain
FOC84_17195	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
FOC84_17305	COG3501	Rhs element vgr protein
FOC84_17365	COG3501	Rhs element vgr protein
FOC84_17385	COG0625	glutathione transferase activity
FOC84_17390	COG0583	DNA-binding transcription factor activity
FOC84_17395	COG1053	succinate dehydrogenase
FOC84_17395	COG3976	FMN-binding domain protein
FOC84_17415	COG3712	iron ion homeostasis
FOC84_17425	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC84_17435	COG1294	oxidase, subunit
FOC84_17440	COG1271	oxidase subunit
FOC84_17450	COG0697	spore germination
FOC84_17455	COG0778	Nitroreductase
FOC84_17465	COG1028	Short-chain dehydrogenase reductase Sdr
FOC84_17475	COG0842	Transport permease protein
FOC84_17480	COG0842	Transport permease protein
FOC84_17480	COG1129	ABC transporter
FOC84_17485	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FOC84_17500	COG2200	EAL domain
FOC84_17505	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
FOC84_17510	COG0745	RESPONSE REGULATOR receiver
FOC84_17540	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FOC84_17540	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FOC84_17550	COG0489	protein tyrosine kinase activity
FOC84_17565	COG0717	Belongs to the dCTP deaminase family
FOC84_17575	COG5001	Diguanylate cyclase
FOC84_17575	COG2203	Gaf domain
FOC84_17575	COG4251	negative regulation of phosphorylation
FOC84_17575	COG3706	GGDEF domain
FOC84_17590	COG1982	Orn Lys Arg decarboxylase major
FOC84_17595	COG2081	HI0933 family
FOC84_17610	COG0404	The glycine cleavage system catalyzes the degradation of glycine
FOC84_17615	COG0509	glycine decarboxylation via glycine cleavage system
FOC84_17620	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
FOC84_17620	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
FOC84_17635	COG0154	amidase activity
FOC84_17640	COG4172	Belongs to the ABC transporter superfamily
FOC84_17645	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOC84_17650	COG0601	transmembrane transport
FOC84_17675	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC84_17700	COG2941	Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol
FOC84_17705	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
FOC84_17710	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
FOC84_17735	COG0438	transferase activity, transferring glycosyl groups
FOC84_17740	COG0438	transferase activity, transferring glycosyl groups
FOC84_17750	COG0166	Belongs to the GPI family
FOC84_17765	COG0277	FAD linked oxidase domain protein
FOC84_17770	COG0745	RESPONSE REGULATOR receiver
FOC84_17775	COG0642	Histidine kinase
FOC84_17785	COG2186	Transcriptional regulator
FOC84_17790	COG1368	sulfuric ester hydrolase activity
FOC84_17795	COG0204	Acyl-transferase
FOC84_17830	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
FOC84_17845	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
FOC84_17865	COG0193	aminoacyl-tRNA hydrolase activity
FOC84_17875	COG0012	GTP binding
FOC84_17925	COG1136	(ABC) transporter
FOC84_17930	COG0577	efflux transmembrane transporter activity
FOC84_17930	COG1136	(ABC) transporter
FOC84_17940	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FOC84_17950	COG2814	Major facilitator Superfamily
FOC84_17965	COG3135	benzoate transporter
FOC84_17970	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
FOC84_17975	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
FOC84_17980	COG0742	ribosomal rna small subunit methyltransferase
FOC84_18055	COG3639	organic phosphonate transmembrane transporter activity
FOC84_18060	COG3639	organic phosphonate transmembrane transporter activity
FOC84_18065	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
FOC84_18090	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
FOC84_18095	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
FOC84_18105	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
FOC84_18110	COG1546	Belongs to the CinA family
FOC84_18115	COG0284	orotidine-5'-phosphate decarboxylase activity
FOC84_18120	COG1252	NADH dehydrogenase
FOC84_18125	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
FOC84_18135	COG1063	alcohol dehydrogenase
FOC84_18140	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FOC84_18150	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
FOC84_18155	COG1028	Short-chain dehydrogenase reductase Sdr
FOC84_18160	COG0179	Fumarylacetoacetate (FAA) hydrolase
FOC84_18165	COG2721	sulfolactate sulfo-lyase activity
FOC84_18170	COG4948	Mandelate Racemase Muconate Lactonizing
FOC84_18175	COG0246	Mannitol dehydrogenase
FOC84_18180	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
FOC84_18190	COG1917	Cupin 2, conserved barrel domain protein
FOC84_18220	COG1846	Transcriptional regulator
FOC84_18230	COG0459	protein refolding
FOC84_18235	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
FOC84_18240	COG0583	DNA-binding transcription factor activity
FOC84_18245	COG0477	Major facilitator Superfamily
FOC84_18265	COG0697	spore germination
FOC84_18280	COG1176	ABC-type spermidine putrescine transport system, permease component I
FOC84_18290	COG3842	ATPase activity
FOC84_18310	COG1802	Transcriptional regulator
FOC84_18330	COG0028	Belongs to the TPP enzyme family
FOC84_18350	COG4774	siderophore transport
FOC84_18370	COG2382	esterase
FOC84_18380	COG0668	transmembrane transport
FOC84_18405	COG2249	NAD(P)H dehydrogenase (quinone) activity
FOC84_18410	COG1802	Transcriptional regulator
FOC84_18420	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_18435	COG1595	DNA-templated transcription, initiation
FOC84_18440	COG3712	iron ion homeostasis
FOC84_18445	COG4774	siderophore transport
FOC84_18450	COG1960	acyl-CoA dehydrogenase activity
FOC84_18470	COG1454	alcohol dehydrogenase
FOC84_18475	COG1012	belongs to the aldehyde dehydrogenase family
FOC84_18485	COG1028	Short-chain dehydrogenase reductase Sdr
FOC84_18490	COG2030	dehydratase
FOC84_18490	COG1012	belongs to the aldehyde dehydrogenase family
FOC84_18515	COG0583	DNA-binding transcription factor activity
FOC84_18525	COG0028	Belongs to the TPP enzyme family
FOC84_18525	COG4032	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
FOC84_18530	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
FOC84_18550	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FOC84_18555	COG0625	glutathione transferase activity
FOC84_18560	COG0154	amidase activity
FOC84_18565	COG4608	Belongs to the ABC transporter superfamily
FOC84_18570	COG0444	Belongs to the ABC transporter superfamily
FOC84_18575	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOC84_18580	COG0601	transmembrane transport
FOC84_18585	COG0747	negative chemotaxis
FOC84_18615	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
FOC84_18620	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
FOC84_18625	COG3957	D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase
FOC84_18660	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
FOC84_18680	COG0028	Belongs to the TPP enzyme family
FOC84_18685	COG3386	PFAM SMP-30 Gluconolaconase
FOC84_18690	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_18695	COG1802	Transcriptional regulator
FOC84_18725	COG0179	Fumarylacetoacetate (FAA) hydrolase
FOC84_18730	COG1414	Transcriptional regulator
FOC84_18735	COG0583	DNA-binding transcription factor activity
FOC84_18765	COG0133	tryptophan synthase activity
FOC84_18770	COG0159	tryptophan synthase activity
FOC84_18780	COG1024	Enoyl-CoA hydratase
FOC84_18790	COG1960	acyl-CoA dehydrogenase activity
FOC84_18815	COG0446	pyridine nucleotide-disulphide oxidoreductase
FOC84_18820	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
FOC84_18845	COG2010	Cytochrome c
FOC84_18850	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FOC84_18855	COG0737	Belongs to the 5'-nucleotidase family
FOC84_18870	COG1024	Enoyl-CoA hydratase
FOC84_18870	COG1250	3-hydroxyacyl-CoA dehydrogenase
FOC84_18875	COG0183	Belongs to the thiolase family
FOC84_18895	COG1024	Enoyl-CoA hydratase
FOC84_18900	COG1960	acyl-CoA dehydrogenase activity
FOC84_18905	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
FOC84_18925	COG0183	Belongs to the thiolase family
FOC84_18930	COG1960	acyl-CoA dehydrogenase activity
FOC84_18965	COG1280	lysine exporter protein (LysE YggA)
FOC84_18970	COG2084	Dehydrogenase
FOC84_18995	COG2079	MmgE PrpD family protein
FOC84_19010	COG1024	Enoyl-CoA hydratase
FOC84_19035	COG1960	acyl-CoA dehydrogenase activity
FOC84_19040	COG1960	acyl-CoA dehydrogenase activity
FOC84_19045	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
FOC84_19060	COG1028	Short-chain dehydrogenase reductase Sdr
FOC84_19065	COG0183	Belongs to the thiolase family
FOC84_19075	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_19085	COG1024	Enoyl-CoA hydratase
FOC84_19090	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC84_19115	COG2188	Transcriptional regulator
FOC84_19120	COG0730	response to heat
FOC84_19135	COG2837	iron assimilation
FOC84_19145	COG0667	Aldo Keto reductase
FOC84_19150	COG3795	YCII-related domain
FOC84_19165	COG0519	Catalyzes the synthesis of GMP from XMP
FOC84_19180	COG2197	response regulator
FOC84_19195	COG0625	glutathione transferase activity
FOC84_19210	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FOC84_19220	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
FOC84_19225	COG1845	cytochrome c oxidase, subunit III
FOC84_19230	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
FOC84_19235	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
FOC84_19240	COG0477	Major facilitator Superfamily
FOC84_19245	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC84_19250	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
FOC84_19285	COG0583	DNA-binding transcription factor activity
FOC84_19295	COG4106	trans-aconitate 2-methyltransferase activity
FOC84_19300	COG1538	Outer membrane efflux protein
FOC84_19320	COG2207	Transcriptional regulator
FOC84_19325	COG2807	transmembrane transport
FOC84_19345	COG0330	HflC and HflK could
FOC84_19350	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FOC84_19370	COG4773	Receptor
FOC84_19380	COG3712	iron ion homeostasis
FOC84_19390	COG1595	DNA-templated transcription, initiation
FOC84_19395	COG3712	iron ion homeostasis
FOC84_19415	COG1309	transcriptional regulator
FOC84_19435	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FOC84_19440	COG1028	Short-chain dehydrogenase reductase Sdr
FOC84_19445	COG1285	pathogenesis
FOC84_19450	COG1028	Short-chain dehydrogenase reductase Sdr
FOC84_19455	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
FOC84_19465	COG1262	PFAM Formylglycine-generating sulfatase enzyme
FOC84_19470	COG3145	DNA-N1-methyladenine dioxygenase activity
FOC84_19475	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FOC84_19480	COG1396	sequence-specific DNA binding
FOC84_19485	COG0456	acetyltransferase
FOC84_19500	COG0300	oxidoreductase activity
FOC84_19530	COG0697	spore germination
FOC84_19555	COG0281	malic enzyme
FOC84_19555	COG0280	phosphate acetyltransferase
FOC84_19575	COG4772	TonB-dependent receptor
FOC84_19590	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
FOC84_19595	COG1845	cytochrome c oxidase, subunit III
FOC84_19600	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
FOC84_19610	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
FOC84_19630	COG1999	signal sequence binding
FOC84_19675	COG4771	TonB-dependent receptor
FOC84_19685	COG1126	abc transporter atp-binding protein
FOC84_19690	COG0765	amino acid transport
FOC84_19695	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC84_19700	COG3191	aminopeptidase activity
FOC84_19705	COG1272	protein, Hemolysin III
FOC84_19710	COG1522	sequence-specific DNA binding
FOC84_19720	COG1113	amino acid transport
FOC84_19730	COG2378	regulation of single-species biofilm formation
FOC84_19760	COG1595	DNA-templated transcription, initiation
FOC84_19775	COG3720	iron ion transport
FOC84_19780	COG4558	Periplasmic binding protein
FOC84_19785	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOC84_19795	COG1666	GTP binding
FOC84_19800	COG0583	DNA-binding transcription factor activity
FOC84_19805	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
FOC84_19825	COG0671	phosphoesterase, PA-phosphatase related
FOC84_19905	COG0456	acetyltransferase
FOC84_19920	COG1028	Short-chain dehydrogenase reductase Sdr
FOC84_19925	COG0251	oxidation-reduction process
FOC84_19965	COG0683	leucine binding
FOC84_19970	COG2188	Transcriptional regulator
FOC84_19980	COG0318	PFAM AMP-dependent synthetase and ligase
FOC84_19995	COG1028	Short-chain dehydrogenase reductase Sdr
FOC84_20015	COG0745	RESPONSE REGULATOR receiver
FOC84_20035	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
FOC84_20040	COG0583	DNA-binding transcription factor activity
FOC84_20065	COG2223	nitrite transmembrane transporter activity
FOC84_20075	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
FOC84_20080	COG3383	formate dehydrogenase (NAD+) activity
FOC84_20100	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
FOC84_20110	COG0303	'Molybdopterin
FOC84_20115	COG0521	Mo-molybdopterin cofactor biosynthetic process
FOC84_20120	COG0314	molybdopterin synthase activity
FOC84_20130	COG0315	cyclic pyranopterin monophosphate synthase activity
FOC84_20140	COG0412	Dienelactone hydrolase
FOC84_20150	COG0678	peroxiredoxin activity
FOC84_20160	COG0697	spore germination
FOC84_20170	COG4191	Histidine kinase
FOC84_20205	COG0667	Aldo Keto reductase
FOC84_20210	COG0815	Transfers the fatty acyl group on membrane lipoproteins
FOC84_20215	COG4535	Mg2 and Co2 transporter CorC
FOC84_20220	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
FOC84_20225	COG1702	phosphate starvation-inducible protein PhoH
FOC84_20230	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
FOC84_20240	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
FOC84_20255	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FOC84_20260	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FOC84_20265	COG1862	Preprotein translocase
FOC84_20270	COG0343	queuine tRNA-ribosyltransferase activity
FOC84_20275	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
FOC84_20290	COG2027	D-alanyl-D-alanine carboxypeptidase
FOC84_20295	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
FOC84_20300	COG1648	precorrin-2 dehydrogenase activity
FOC84_20300	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
FOC84_20310	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FOC84_20315	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FOC84_20320	COG1116	anion transmembrane transporter activity
FOC84_20325	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
FOC84_20330	COG0243	molybdopterin cofactor binding
FOC84_20340	COG4575	ribosome binding
FOC84_20360	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
FOC84_20365	COG0741	lytic transglycosylase activity
FOC84_20380	COG0281	malic enzyme
FOC84_20380	COG0280	phosphate acetyltransferase
FOC84_20390	COG2732	(Barnase) inhibitor
FOC84_20395	COG1385	rRNA (uridine-N3-)-methyltransferase activity
FOC84_20400	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
FOC84_20405	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
FOC84_20410	COG0126	phosphoglycerate kinase activity
FOC84_20420	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
FOC84_20425	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
FOC84_20445	COG0625	glutathione transferase activity
FOC84_20465	COG0789	Transcriptional regulator
FOC84_20490	COG0306	phosphate transporter
FOC84_20500	COG0521	Mo-molybdopterin cofactor biosynthetic process
FOC84_20510	COG0739	heme binding
FOC84_20520	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
FOC84_20540	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
FOC84_20545	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
FOC84_20550	COG3639	organic phosphonate transmembrane transporter activity
FOC84_20565	COG0405	Gamma-glutamyltransferase
FOC84_20570	COG0583	DNA-binding transcription factor activity
FOC84_20575	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
FOC84_20580	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
FOC84_20585	COG3454	Phosphonate metabolism
FOC84_20590	COG2188	Transcriptional regulator
FOC84_20595	COG3624	Phosphonate C-P lyase system protein PhnG
FOC84_20600	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
FOC84_20605	COG3626	phosphonate metabolism
FOC84_20610	COG3627	carbon phosphorus lyase activity
FOC84_20615	COG4107	phosphonate C-P lyase system protein PhnK
FOC84_20620	COG4778	phosphonate C-P lyase system protein PhnL
FOC84_20625	COG3454	Phosphonate metabolism
FOC84_20645	COG1301	dicarboxylic acid transport
FOC84_20665	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
FOC84_20675	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
FOC84_20680	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
FOC84_20685	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
FOC84_20690	COG0009	L-threonylcarbamoyladenylate synthase
FOC84_20695	COG1414	Transcriptional regulator
FOC84_20700	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
FOC84_20715	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC84_20725	COG0010	Belongs to the arginase family
FOC84_20740	COG1126	abc transporter atp-binding protein
FOC84_20745	COG0028	Belongs to the TPP enzyme family
FOC84_20750	COG0583	DNA-binding transcription factor activity
FOC84_20770	COG1178	ABC-type Fe3 transport system permease component
FOC84_20775	COG3842	ATPase activity
FOC84_20820	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
FOC84_20875	COG0028	Belongs to the TPP enzyme family
FOC84_20880	COG0583	DNA-binding transcription factor activity
FOC84_20885	COG4974	Belongs to the 'phage' integrase family
FOC84_20890	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
FOC84_20895	COG0311	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
FOC84_20910	COG1686	Belongs to the peptidase S11 family
FOC84_20935	COG1074	ATP-dependent DNA helicase activity
FOC84_20945	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
FOC84_20960	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC84_20965	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FOC84_20975	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FOC84_20985	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
FOC84_20990	COG0505	Belongs to the CarA family
FOC84_20995	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
FOC84_21005	COG0406	alpha-ribazole phosphatase activity
FOC84_21015	COG3842	ATPase activity
FOC84_21035	COG2233	PERMEase
FOC84_21040	COG0840	transmembrane signaling receptor activity
FOC84_21045	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FOC84_21050	COG1534	Rna-binding protein
FOC84_21055	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
FOC84_21060	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
FOC84_21070	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
FOC84_21105	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
FOC84_21230	COG4695	Portal protein
FOC84_21255	COG0582	viral genome integration into host DNA
FOC84_21280	COG4221	oxidoreductase activity
FOC84_21305	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_21315	COG0183	Belongs to the thiolase family
FOC84_21320	COG1414	Transcriptional regulator
FOC84_21335	COG1960	acyl-CoA dehydrogenase activity
FOC84_21370	COG0653	protein targeting
FOC84_21375	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FOC84_21380	COG4774	siderophore transport
FOC84_21385	COG3712	iron ion homeostasis
FOC84_21390	COG1595	DNA-templated transcription, initiation
FOC84_21400	COG1418	mRNA catabolic process
FOC84_21410	COG1984	allophanate hydrolase subunit 2
FOC84_21425	COG0511	ligase activity, forming carbon-carbon bonds
FOC84_21430	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
FOC84_21435	COG0583	DNA-binding transcription factor activity
FOC84_21450	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
FOC84_21455	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FOC84_21465	COG0318	PFAM AMP-dependent synthetase and ligase
FOC84_21480	COG1802	Transcriptional regulator
FOC84_21505	COG1335	isochorismatase
FOC84_21510	COG1335	isochorismatase
FOC84_21515	COG0583	DNA-binding transcription factor activity
FOC84_21525	COG1609	Transcriptional regulator
FOC84_21535	COG0251	oxidation-reduction process
FOC84_21565	COG2207	Transcriptional regulator
FOC84_21570	COG0667	Aldo Keto reductase
FOC84_21585	COG0500	methyltransferase
FOC84_21590	COG1028	Short-chain dehydrogenase reductase Sdr
FOC84_21595	COG3321	synthase
FOC84_21595	COG1028	Short-chain dehydrogenase reductase Sdr
FOC84_21595	COG0604	alcohol dehydrogenase
FOC84_21610	COG0559	Belongs to the binding-protein-dependent transport system permease family
FOC84_21620	COG1028	Short-chain dehydrogenase reductase Sdr
FOC84_21625	COG1250	3-hydroxyacyl-CoA dehydrogenase
FOC84_21630	COG3246	L-lysine catabolic process to acetate
FOC84_21635	COG0371	Dehydrogenase
FOC84_21640	COG1802	Transcriptional regulator
FOC84_21645	COG3959	Transketolase, thiamine diphosphate binding domain
FOC84_21650	COG3958	Transketolase
FOC84_21655	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
FOC84_21665	COG3938	Belongs to the proline racemase family
FOC84_21670	COG1177	transmembrane transport
FOC84_21675	COG1176	ABC-type spermidine putrescine transport system, permease component I
FOC84_21680	COG3842	ATPase activity
FOC84_21735	COG3264	Mechanosensitive ion channel
FOC84_21735	COG1511	domain protein
FOC84_21740	COG0583	DNA-binding transcription factor activity
FOC84_21745	COG0427	acetyl-CoA hydrolase
FOC84_21750	COG0583	DNA-binding transcription factor activity
FOC84_21800	COG1250	3-hydroxyacyl-CoA dehydrogenase
FOC84_21810	COG0477	Major facilitator Superfamily
FOC84_21820	COG0154	amidase activity
FOC84_21835	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
FOC84_21850	COG0495	leucyl-tRNA aminoacylation
FOC84_21855	COG2814	Major facilitator Superfamily
FOC84_21860	COG1846	Transcriptional regulator
FOC84_21870	COG1686	Belongs to the peptidase S11 family
FOC84_21905	COG0267	Belongs to the bacterial ribosomal protein bL33 family
FOC84_21910	COG0227	Belongs to the bacterial ribosomal protein bL28 family
FOC84_21915	COG2814	Major facilitator Superfamily
FOC84_21920	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
FOC84_21930	COG4176	ABC-type proline glycine betaine transport system permease component
FOC84_21935	COG4175	Glycine betaine
FOC84_21935	COG3448	diguanylate cyclase activity
FOC84_21955	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC84_21960	COG0583	DNA-binding transcription factor activity
FOC84_21980	COG0318	PFAM AMP-dependent synthetase and ligase
FOC84_21990	COG2030	dehydratase
FOC84_22005	COG1960	acyl-CoA dehydrogenase activity
FOC84_22010	COG0318	PFAM AMP-dependent synthetase and ligase
FOC84_22015	COG0330	HflC and HflK could
FOC84_22030	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC84_22050	COG2030	dehydratase
FOC84_22055	COG1028	Short-chain dehydrogenase reductase Sdr
FOC84_22065	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_22070	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC84_22075	COG1024	Enoyl-CoA hydratase
FOC84_22080	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_22085	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_22090	COG0583	DNA-binding transcription factor activity
FOC84_22095	COG1960	acyl-CoA dehydrogenase activity
FOC84_22105	COG0183	Belongs to the thiolase family
FOC84_22110	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC84_22115	COG1609	Transcriptional regulator
FOC84_22125	COG1012	belongs to the aldehyde dehydrogenase family
FOC84_22130	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_22135	COG2030	dehydratase
FOC84_22150	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
FOC84_22160	COG0511	ligase activity, forming carbon-carbon bonds
FOC84_22165	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC84_22170	COG1028	Short-chain dehydrogenase reductase Sdr
FOC84_22175	COG1595	DNA-templated transcription, initiation
FOC84_22180	COG3712	iron ion homeostasis
FOC84_22185	COG4774	siderophore transport
FOC84_22200	COG0583	DNA-binding transcription factor activity
FOC84_22215	COG0243	molybdopterin cofactor binding
FOC84_22220	COG3781	membrane
FOC84_22235	COG0583	DNA-binding transcription factor activity
FOC84_22245	COG0815	Transfers the fatty acyl group on membrane lipoproteins
FOC84_22275	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_22285	COG0235	Class ii aldolase
FOC84_22290	COG1396	sequence-specific DNA binding
FOC84_22310	COG1012	belongs to the aldehyde dehydrogenase family
FOC84_22315	COG1126	abc transporter atp-binding protein
FOC84_22330	COG0765	amino acid transport
FOC84_22335	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FOC84_22420	COG0297	glycogen (starch) synthase activity
FOC84_22460	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_22500	COG0028	Belongs to the TPP enzyme family
FOC84_22560	COG0463	Glycosyl transferase, family 2
FOC84_22565	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
FOC84_22575	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
FOC84_22585	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
FOC84_22590	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
FOC84_22595	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC84_22610	COG1802	Transcriptional regulator
FOC84_22640	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FOC84_22715	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_22725	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
FOC84_22735	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FOC84_22750	COG0583	DNA-binding transcription factor activity
FOC84_22780	COG2808	Putative FMN-binding domain
FOC84_22810	COG2321	neutral zinc metallopeptidase
FOC84_22815	COG0009	L-threonylcarbamoyladenylate synthase
FOC84_22820	COG1994	Peptidase M50
FOC84_22825	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FOC84_22830	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
FOC84_22840	COG2850	peptidyl-arginine hydroxylation
FOC84_22845	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
FOC84_22875	COG1028	Short-chain dehydrogenase reductase Sdr
FOC84_22880	COG0583	DNA-binding transcription factor activity
FOC84_22900	COG0604	alcohol dehydrogenase
FOC84_22905	COG1028	Short-chain dehydrogenase reductase Sdr
FOC84_22910	COG0583	DNA-binding transcription factor activity
FOC84_22915	COG3360	Dodecin
FOC84_22935	COG1802	Transcriptional regulator
FOC84_22955	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FOC84_22960	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FOC84_22980	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FOC84_23020	COG0668	transmembrane transport
FOC84_23045	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC84_23050	COG3135	benzoate transporter
FOC84_23065	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
FOC84_23080	COG4263	nitrous-oxide reductase activity
FOC84_23095	COG1253	flavin adenine dinucleotide binding
FOC84_23100	COG1968	undecaprenyl-diphosphatase activity
FOC84_23105	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FOC84_23120	COG0215	cysteine-tRNA ligase activity
FOC84_23130	COG0825	malonyl-CoA metabolic process
FOC84_23140	COG0527	aspartate kinase activity
FOC84_23150	COG0582	viral genome integration into host DNA
FOC84_23155	COG0582	viral genome integration into host DNA
FOC84_23160	COG3119	arylsulfatase activity
FOC84_23165	COG2603	Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA
FOC84_23240	COG1414	Transcriptional regulator
FOC84_23250	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_23260	COG1024	Enoyl-CoA hydratase
FOC84_23265	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
FOC84_23270	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
FOC84_23275	COG0318	PFAM AMP-dependent synthetase and ligase
FOC84_23285	COG0179	Fumarylacetoacetate (FAA) hydrolase
FOC84_23290	COG2186	Transcriptional regulator
FOC84_23300	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
FOC84_23305	COG3395	kinase activity
FOC84_23315	COG4774	siderophore transport
FOC84_23320	COG4774	siderophore transport
FOC84_23330	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_23340	COG0318	PFAM AMP-dependent synthetase and ligase
FOC84_23355	COG0183	Belongs to the thiolase family
FOC84_23360	COG1024	Enoyl-CoA hydratase
FOC84_23360	COG1250	3-hydroxyacyl-CoA dehydrogenase
FOC84_23370	COG1250	3-hydroxyacyl-CoA dehydrogenase
FOC84_23370	COG1024	Enoyl-CoA hydratase
FOC84_23375	COG0183	Belongs to the thiolase family
FOC84_23380	COG1960	acyl-CoA dehydrogenase activity
FOC84_23385	COG1309	transcriptional regulator
FOC84_23395	COG2197	response regulator
FOC84_23400	COG2197	response regulator
FOC84_23405	COG0297	glycogen (starch) synthase activity
FOC84_23410	COG0110	maltose O-acetyltransferase activity
FOC84_23420	COG0438	transferase activity, transferring glycosyl groups
FOC84_23440	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FOC84_23465	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
FOC84_23485	COG0166	Belongs to the GPI family
FOC84_23490	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
FOC84_23495	COG1045	serine acetyltransferase
FOC84_23500	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
FOC84_23515	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
FOC84_23535	COG0598	Magnesium transport protein CorA
FOC84_23550	COG0601	transmembrane transport
FOC84_23555	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOC84_23560	COG4172	Belongs to the ABC transporter superfamily
FOC84_23565	COG1846	Transcriptional regulator
FOC84_23610	COG4964	Belongs to the GSP D family
FOC84_23650	COG3604	Transcriptional regulator
FOC84_23665	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
FOC84_23680	COG3384	dioxygenase
FOC84_23685	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
FOC84_23695	COG1028	Short-chain dehydrogenase reductase Sdr
FOC84_23700	COG0318	PFAM AMP-dependent synthetase and ligase
FOC84_23710	COG1802	Transcriptional regulator
FOC84_23760	COG1049	propionate catabolic process, 2-methylcitrate cycle
FOC84_23780	COG0516	GMP reductase activity
FOC84_23780	COG0517	IMP dehydrogenase activity
FOC84_23785	COG0583	DNA-binding transcription factor activity
FOC84_23790	COG0183	Belongs to the thiolase family
FOC84_23800	COG1024	Enoyl-CoA hydratase
FOC84_23815	COG1960	acyl-CoA dehydrogenase activity
FOC84_23830	COG1802	Transcriptional regulator
FOC84_23840	COG1024	Enoyl-CoA hydratase
FOC84_23845	COG0318	PFAM AMP-dependent synthetase and ligase
FOC84_23855	COG1595	DNA-templated transcription, initiation
FOC84_23860	COG3712	iron ion homeostasis
FOC84_23870	COG0667	Aldo Keto reductase
FOC84_23880	COG4120	Belongs to the binding-protein-dependent transport system permease family
FOC84_23885	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
FOC84_23890	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FOC84_23895	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FOC84_23900	COG4262	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
FOC84_23925	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
FOC84_23930	COG0725	ABC transporter, periplasmic molybdate-binding protein
FOC84_23935	COG4149	molybdate abc transporter
FOC84_23940	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
FOC84_23965	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FOC84_23970	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FOC84_23980	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
FOC84_23985	COG0736	holo-[acyl-carrier-protein] synthase activity
FOC84_24000	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
FOC84_24010	COG1858	cytochrome C peroxidase
FOC84_24015	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
FOC84_24015	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
FOC84_24020	COG2224	Isocitrate lyase
FOC84_24035	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
FOC84_24035	COG4106	trans-aconitate 2-methyltransferase activity
FOC84_24045	COG0156	8-amino-7-oxononanoate synthase activity
FOC84_24065	COG3278	Belongs to the heme-copper respiratory oxidase family
FOC84_24085	COG0348	domain, Protein
FOC84_24100	COG2824	Alkylphosphonate utilization operon protein PhnA
FOC84_24120	COG4948	Mandelate Racemase Muconate Lactonizing
FOC84_24130	COG1131	(ABC) transporter
FOC84_24135	COG0842	Transport permease protein
FOC84_24155	COG0789	Transcriptional regulator
FOC84_24180	COG1272	protein, Hemolysin III
FOC84_24205	COG2169	Transcriptional regulator
FOC84_24240	COG0251	oxidation-reduction process
FOC84_24250	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
FOC84_24290	COG1566	PFAM secretion protein HlyD family protein
FOC84_24315	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
FOC84_24330	COG1228	amidohydrolase
FOC84_24335	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC84_24355	COG1250	3-hydroxyacyl-CoA dehydrogenase
FOC84_24365	COG2207	Transcriptional regulator
FOC84_24365	COG3708	Transcriptional regulator
FOC84_24370	COG2814	Major facilitator Superfamily
FOC84_24385	COG1464	Belongs to the NlpA lipoprotein family
FOC84_24390	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
FOC84_24395	COG2011	ABC-type metal ion transport system permease component
FOC84_24410	COG2326	polyphosphate kinase activity
FOC84_24420	COG0023	Translation Initiation Factor
FOC84_24435	COG1712	Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate
FOC84_24450	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_24455	COG1473	amidohydrolase
FOC84_24460	COG0477	Major facilitator Superfamily
FOC84_24465	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FOC84_24475	COG0604	alcohol dehydrogenase
FOC84_24475	COG1028	Short-chain dehydrogenase reductase Sdr
FOC84_24475	COG3321	synthase
FOC84_24480	COG1733	regulation of RNA biosynthetic process
FOC84_24490	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_24505	COG0583	DNA-binding transcription factor activity
FOC84_24520	COG2951	lytic endotransglycosylase activity
FOC84_24540	COG0519	Catalyzes the synthesis of GMP from XMP
FOC84_24550	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOC84_24585	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FOC84_24590	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FOC84_24600	COG1522	sequence-specific DNA binding
FOC84_24645	COG0625	glutathione transferase activity
FOC84_24650	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FOC84_24655	COG1595	DNA-templated transcription, initiation
FOC84_24670	COG3530	Putative quorum-sensing-regulated virulence factor
FOC84_24700	COG0443	Heat shock 70 kDa protein
FOC84_24705	COG0583	DNA-binding transcription factor activity
FOC84_24715	COG0494	nUDIX hydrolase
FOC84_24745	COG0477	Major facilitator Superfamily
FOC84_24755	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FOC84_24765	COG0542	response to heat
FOC84_24775	COG0446	pyridine nucleotide-disulphide oxidoreductase
FOC84_24780	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FOC84_24785	COG4172	Belongs to the ABC transporter superfamily
FOC84_24790	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOC84_24800	COG0747	negative chemotaxis
FOC84_24805	COG0235	Class ii aldolase
FOC84_24810	COG1802	Transcriptional regulator
FOC84_24825	COG3485	protocatechuate 3,4-dioxygenase
FOC84_24830	COG1012	belongs to the aldehyde dehydrogenase family
FOC84_24870	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
FOC84_24875	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FOC84_24880	COG1802	Transcriptional regulator
FOC84_24890	COG5441	Belongs to the UPF0261 family
FOC84_24895	COG5564	TIM-barrel signal transduction protein
FOC84_24910	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
FOC84_24925	COG1477	protein flavinylation
FOC84_24950	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
FOC84_24960	COG1562	ergosterol biosynthetic process
FOC84_24965	COG1562	ergosterol biosynthetic process
FOC84_24970	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
FOC84_24975	COG1028	Short-chain dehydrogenase reductase Sdr
FOC84_24980	COG0583	DNA-binding transcription factor activity
FOC84_24985	COG1942	4-Oxalocrotonate Tautomerase
FOC84_24995	COG1234	tRNA 3'-trailer cleavage
FOC84_25015	COG3971	2-oxopent-4-enoate hydratase activity
FOC84_25030	COG1012	belongs to the aldehyde dehydrogenase family
FOC84_25035	COG3384	dioxygenase
FOC84_25065	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FOC84_25075	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_25085	COG2186	Transcriptional regulator
FOC84_25115	COG0583	DNA-binding transcription factor activity
FOC84_25125	COG1012	belongs to the aldehyde dehydrogenase family
FOC84_25135	COG0583	DNA-binding transcription factor activity
FOC84_25140	COG0268	Binds directly to 16S ribosomal RNA
FOC84_25150	COG0728	peptidoglycan biosynthetic process
FOC84_25160	COG0563	adenylate kinase activity
FOC84_25165	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
FOC84_25170	COG2835	tetraacyldisaccharide 4'-kinase activity
FOC84_25175	COG1663	tetraacyldisaccharide 4'-kinase activity
FOC84_25185	COG0811	peptide transport
FOC84_25190	COG1570	exodeoxyribonuclease VII activity
FOC84_25195	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
FOC84_25210	COG0183	Belongs to the thiolase family
FOC84_25220	COG1278	Cold shock
FOC84_25225	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
FOC84_25230	COG2373	Large extracellular alpha-helical protein
FOC84_25235	COG4953	penicillin-binding protein 1C
FOC84_25245	COG2995	paraquat-inducible protein a
FOC84_25250	COG3008	intermembrane lipid transfer
FOC84_25260	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
FOC84_25260	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
FOC84_25260	COG0506	proline dehydrogenase activity
FOC84_25290	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC84_25295	COG1024	Enoyl-CoA hydratase
FOC84_25305	COG1802	Transcriptional regulator
FOC84_25310	COG2271	Major facilitator Superfamily
FOC84_25325	COG1914	H( )-stimulated, divalent metal cation uptake system
FOC84_25330	COG1764	response to oxidative stress
FOC84_25340	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC84_25345	COG0765	amino acid transport
FOC84_25350	COG0765	amino acid transport
FOC84_25355	COG1126	abc transporter atp-binding protein
FOC84_25360	COG1902	pentaerythritol trinitrate reductase activity
FOC84_25375	COG0583	DNA-binding transcription factor activity
FOC84_25415	COG0154	amidase activity
FOC84_25465	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
FOC84_25470	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
FOC84_25475	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
FOC84_25480	COG0196	riboflavin kinase activity
FOC84_25485	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
FOC84_25490	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
FOC84_25490	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
FOC84_25505	COG0210	DNA helicase
FOC84_25515	COG1858	cytochrome C peroxidase
FOC84_25520	COG4771	TonB-dependent receptor
FOC84_25535	COG0488	(ABC) transporter
FOC84_25540	COG2890	protein-(glutamine-N5) methyltransferase activity
FOC84_25550	COG2171	N-acyltransferase activity
FOC84_25585	COG1285	pathogenesis
FOC84_25590	COG3038	cytochrome b561
FOC84_25595	COG2877	3-deoxy-8-phosphooctulonate synthase activity
FOC84_25610	COG3008	intermembrane lipid transfer
FOC84_25630	COG1309	transcriptional regulator
FOC84_25645	COG0583	DNA-binding transcription factor activity
FOC84_25655	COG0251	oxidation-reduction process
FOC84_25680	COG1278	Cold shock
FOC84_25690	COG1278	Cold shock
FOC84_25700	COG0501	Belongs to the peptidase M48B family
FOC84_25705	COG0544	peptidyl-prolyl cis-trans isomerase activity
FOC84_25710	COG0740	serine-type endopeptidase activity
FOC84_25715	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
FOC84_25720	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
FOC84_25725	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
FOC84_25730	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_25735	COG0318	PFAM AMP-dependent synthetase and ligase
FOC84_25755	COG0556	nucleotide-excision repair
FOC84_25760	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
FOC84_25770	COG1104	cysteine desulfurase activity
FOC84_25775	COG0822	iron-sulfur transferase activity
FOC84_25785	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
FOC84_25790	COG0443	Heat shock 70 kDa protein
FOC84_25795	COG0633	Ferredoxin
FOC84_25800	COG2975	iron-sulfur cluster assembly
FOC84_25805	COG1803	Methylglyoxal synthase
FOC84_25810	COG0583	DNA-binding transcription factor activity
FOC84_25815	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_25820	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC84_25830	COG1024	Enoyl-CoA hydratase
FOC84_25865	COG0183	Belongs to the thiolase family
FOC84_25870	COG1309	transcriptional regulator
FOC84_25880	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
FOC84_25885	COG1028	Short-chain dehydrogenase reductase Sdr
FOC84_25895	COG2271	Major facilitator Superfamily
FOC84_25900	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
FOC84_25915	COG1136	(ABC) transporter
FOC84_25930	COG0745	RESPONSE REGULATOR receiver
FOC84_25935	COG4771	TonB-dependent receptor
FOC84_25940	COG4607	ABC-type enterochelin transport system periplasmic component
FOC84_25945	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOC84_25950	COG4605	iron ion homeostasis
FOC84_25955	COG4604	ABC transporter, ATP-binding protein
FOC84_25960	COG0737	Belongs to the 5'-nucleotidase family
FOC84_25970	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
FOC84_25980	COG1116	anion transmembrane transporter activity
FOC84_25985	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FOC84_25990	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FOC84_26060	COG2030	dehydratase
FOC84_26070	COG0318	PFAM AMP-dependent synthetase and ligase
FOC84_26075	COG1028	Short-chain dehydrogenase reductase Sdr
FOC84_26090	COG0473	3-isopropylmalate dehydrogenase activity
FOC84_26105	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
FOC84_26125	COG1850	ribulose-bisphosphate carboxylase activity
FOC84_26135	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
FOC84_26140	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FOC84_26160	COG0765	amino acid transport
FOC84_26165	COG0765	amino acid transport
FOC84_26170	COG1126	abc transporter atp-binding protein
FOC84_26175	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FOC84_26190	COG2146	nitrite reductase [NAD(P)H] activity
FOC84_26190	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
FOC84_26195	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
FOC84_26195	COG2146	nitrite reductase [NAD(P)H] activity
FOC84_26200	COG0583	DNA-binding transcription factor activity
FOC84_26210	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
FOC84_26220	COG0613	PHP domain protein
FOC84_26230	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FOC84_26245	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
FOC84_26245	COG0047	phosphoribosylformylglycinamidine synthase activity
FOC84_26255	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FOC84_26265	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_26360	COG3706	GGDEF domain
FOC84_26365	COG2015	COG2015, Alkyl sulfatase and related hydrolases
FOC84_26400	COG5001	Diguanylate cyclase
FOC84_26405	COG2200	EAL domain
FOC84_26430	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FOC84_26430	COG0543	2 iron, 2 sulfur cluster binding
FOC84_26440	COG0346	lactoylglutathione lyase activity
FOC84_26455	COG1304	FMN binding
FOC84_26480	COG1063	alcohol dehydrogenase
FOC84_26545	COG4977	sequence-specific DNA binding
FOC84_26550	COG1335	isochorismatase
FOC84_26560	COG0129	dihydroxy-acid dehydratase activity
FOC84_26570	COG2271	Major facilitator Superfamily
FOC84_26575	COG0583	DNA-binding transcription factor activity
FOC84_26580	COG4692	amylo-alpha-1,6-glucosidase activity
FOC84_26675	COG0747	negative chemotaxis
FOC84_26680	COG4608	Belongs to the ABC transporter superfamily
FOC84_26685	COG0444	Belongs to the ABC transporter superfamily
FOC84_26690	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOC84_26695	COG0601	transmembrane transport
FOC84_26700	COG2072	flavoprotein involved in K transport
FOC84_26725	COG0583	DNA-binding transcription factor activity
FOC84_26735	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_26775	COG1917	Cupin 2, conserved barrel domain protein
FOC84_26775	COG4977	sequence-specific DNA binding
FOC84_26795	COG0518	GMP synthase (glutamine-hydrolyzing) activity
FOC84_26795	COG0519	Catalyzes the synthesis of GMP from XMP
FOC84_26815	COG0509	glycine decarboxylation via glycine cleavage system
FOC84_26885	COG4948	Mandelate Racemase Muconate Lactonizing
FOC84_26910	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC84_26950	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
FOC84_26960	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_26965	COG1902	pentaerythritol trinitrate reductase activity
FOC84_26965	COG0446	pyridine nucleotide-disulphide oxidoreductase
FOC84_26975	COG1024	Enoyl-CoA hydratase
FOC84_27010	COG4221	oxidoreductase activity
FOC84_27015	COG2814	Major facilitator Superfamily
FOC84_27035	COG0583	DNA-binding transcription factor activity
FOC84_27055	COG2843	Capsule synthesis protein
FOC84_27060	COG4166	transmembrane transport
FOC84_27070	COG4172	Belongs to the ABC transporter superfamily
FOC84_27175	COG0154	amidase activity
FOC84_27205	COG2201	protein-glutamate methylesterase activity
FOC84_27210	COG4251	negative regulation of phosphorylation
FOC84_27210	COG3706	GGDEF domain
FOC84_27210	COG5001	Diguanylate cyclase
FOC84_27210	COG2203	Gaf domain
FOC84_27215	COG1522	sequence-specific DNA binding
FOC84_27245	COG2814	Major facilitator Superfamily
FOC84_27250	COG0583	DNA-binding transcription factor activity
FOC84_27280	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
FOC84_27305	COG0318	PFAM AMP-dependent synthetase and ligase
FOC84_27310	COG1960	acyl-CoA dehydrogenase activity
FOC84_27315	COG1960	acyl-CoA dehydrogenase activity
FOC84_27320	COG0183	Belongs to the thiolase family
FOC84_27325	COG1024	Enoyl-CoA hydratase
FOC84_27325	COG1250	3-hydroxyacyl-CoA dehydrogenase
FOC84_27330	COG0583	DNA-binding transcription factor activity
FOC84_27340	COG2733	membrane
FOC84_27350	COG0625	glutathione transferase activity
FOC84_27375	COG2885	chlorophyll binding
FOC84_27390	COG0583	DNA-binding transcription factor activity
FOC84_27400	COG0745	RESPONSE REGULATOR receiver
FOC84_27405	COG0642	Histidine kinase
FOC84_27425	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
FOC84_27435	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
FOC84_27445	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOC84_27450	COG1846	Transcriptional regulator
FOC84_27460	COG1028	Short-chain dehydrogenase reductase Sdr
FOC84_27480	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FOC84_27485	COG0697	spore germination
FOC84_27495	COG4941	Belongs to the sigma-70 factor family
FOC84_27520	COG3795	YCII-related domain
FOC84_27540	COG1360	Flagellar Motor Protein
FOC84_27560	COG2207	Transcriptional regulator
FOC84_27570	COG1683	Conserved Protein
FOC84_27590	COG1309	transcriptional regulator
FOC84_27610	COG4608	Belongs to the ABC transporter superfamily
FOC84_27615	COG0444	Belongs to the ABC transporter superfamily
FOC84_27620	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOC84_27625	COG0601	transmembrane transport
FOC84_27635	COG1802	Transcriptional regulator
FOC84_27640	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
FOC84_27650	COG0667	Aldo Keto reductase
FOC84_27655	COG0477	Major facilitator Superfamily
FOC84_27665	COG1414	Transcriptional regulator
FOC84_27670	COG1802	Transcriptional regulator
FOC84_27675	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_27680	COG1473	amidohydrolase
FOC84_27690	COG2764	glyoxalase bleomycin resistance protein dioxygenase
FOC84_27740	COG1073	alpha beta
FOC84_27765	COG0820	rRNA (adenine-C2-)-methyltransferase activity
FOC84_27830	COG2271	Major facilitator Superfamily
FOC84_27835	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FOC84_27850	COG0587	DNA-directed DNA polymerase activity
FOC84_27865	COG0833	amino acid
FOC84_27870	COG0400	carboxylic ester hydrolase activity
FOC84_27880	COG1566	PFAM secretion protein HlyD family protein
FOC84_27900	COG0720	synthase
FOC84_27905	COG0602	queuosine metabolic process
FOC84_27920	COG0583	DNA-binding transcription factor activity
FOC84_27925	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_27930	COG0154	amidase activity
FOC84_27940	COG1902	pentaerythritol trinitrate reductase activity
FOC84_27985	COG0842	Transport permease protein
FOC84_27990	COG1131	(ABC) transporter
FOC84_28000	COG1309	transcriptional regulator
FOC84_28005	COG2130	NADP-dependent
FOC84_28045	COG0395	ABC-type sugar transport system, permease component
FOC84_28060	COG0583	DNA-binding transcription factor activity
FOC84_28065	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_28070	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
FOC84_28075	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_28080	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOC84_28090	COG2203	Gaf domain
FOC84_28090	COG2199	diguanylate cyclase activity
FOC84_28095	COG1960	acyl-CoA dehydrogenase activity
FOC84_28125	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FOC84_28130	COG0583	DNA-binding transcription factor activity
FOC84_28135	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_28140	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC84_28145	COG1960	acyl-CoA dehydrogenase activity
FOC84_28150	COG0420	3'-5' exonuclease activity
FOC84_28165	COG1960	acyl-CoA dehydrogenase activity
FOC84_28170	COG1309	transcriptional regulator
FOC84_28180	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC84_28200	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
FOC84_28200	COG2111	Na H antiporter
FOC84_28205	COG1006	Multisubunit Na H antiporter MnhC subunit
FOC84_28210	COG0651	ATP synthesis coupled electron transport
FOC84_28215	COG1863	multisubunit Na H antiporter MnhE subunit
FOC84_28220	COG2212	antiporter activity
FOC84_28245	COG1619	proteins homologs of microcin C7 resistance protein MccF
FOC84_28265	COG0488	(ABC) transporter
FOC84_28270	COG1028	Short-chain dehydrogenase reductase Sdr
FOC84_28275	COG0183	Belongs to the thiolase family
FOC84_28285	COG1024	Enoyl-CoA hydratase
FOC84_28300	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC84_28330	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FOC84_28335	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FOC84_28340	COG2252	PERMEase
FOC84_28345	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
FOC84_28350	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
FOC84_28385	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
FOC84_28390	COG0789	Transcriptional regulator
FOC84_28400	COG0678	peroxiredoxin activity
FOC84_28400	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
FOC84_28410	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
FOC84_28415	COG0584	glycerophosphoryl diester phosphodiesterase
FOC84_28425	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FOC84_28435	COG4181	ATPase activity
FOC84_28445	COG1178	ABC-type Fe3 transport system permease component
FOC84_28450	COG3842	ATPase activity
FOC84_28455	COG0583	DNA-binding transcription factor activity
FOC84_28460	COG0560	Phosphoserine phosphatase
FOC84_28465	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
FOC84_28475	COG0583	DNA-binding transcription factor activity
FOC84_28505	COG0583	DNA-binding transcription factor activity
FOC84_28510	COG4336	lyase activity
FOC84_28540	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FOC84_28580	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC84_28585	COG0765	amino acid transport
FOC84_28590	COG1126	abc transporter atp-binding protein
FOC84_28595	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
FOC84_28600	COG1758	RNA polymerase activity
FOC84_28605	COG0194	GDP metabolic process
FOC84_28610	COG3258	Cytochrome c
FOC84_28615	COG2863	cytochrome
FOC84_28620	COG1028	Short-chain dehydrogenase reductase Sdr
FOC84_28625	COG0791	NLP P60 protein
FOC84_28630	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
FOC84_28635	COG0833	amino acid
FOC84_28650	COG1561	YicC-like family, N-terminal region
FOC84_28655	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
FOC84_28665	COG1960	acyl-CoA dehydrogenase activity
FOC84_28675	COG2200	EAL domain
FOC84_28675	COG2199	diguanylate cyclase activity
FOC84_28675	COG2203	Gaf domain
FOC84_28680	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
FOC84_28685	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FOC84_28690	COG0174	glutamine synthetase
FOC84_28700	COG2204	response regulator
FOC84_28705	COG0583	DNA-binding transcription factor activity
FOC84_28710	COG1741	Belongs to the pirin family
FOC84_28715	COG1741	Belongs to the pirin family
FOC84_28720	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_28725	COG3842	ATPase activity
FOC84_28735	COG1840	ABC-type Fe3 transport system, periplasmic component
FOC84_28760	COG0583	DNA-binding transcription factor activity
FOC84_28770	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
FOC84_28775	COG0583	DNA-binding transcription factor activity
FOC84_28780	COG0783	Belongs to the Dps family
FOC84_28795	COG1802	Transcriptional regulator
FOC84_28800	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FOC84_28805	COG0745	RESPONSE REGULATOR receiver
FOC84_28810	COG2205	protein histidine kinase activity
FOC84_28825	COG3842	ATPase activity
FOC84_28830	COG0395	ABC-type sugar transport system, permease component
FOC84_28835	COG1175	transmembrane transport
FOC84_28840	COG1653	transport
FOC84_28850	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
FOC84_28870	COG0583	DNA-binding transcription factor activity
FOC84_28880	COG0559	Belongs to the binding-protein-dependent transport system permease family
FOC84_28900	COG1794	racemase activity, acting on amino acids and derivatives
FOC84_28905	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
FOC84_28915	COG0583	DNA-binding transcription factor activity
FOC84_28920	COG0625	glutathione transferase activity
FOC84_28925	COG2133	pyrroloquinoline quinone binding
FOC84_28935	COG0697	spore germination
FOC84_28940	COG2363	Small membrane protein
FOC84_28970	COG0010	Belongs to the arginase family
FOC84_28975	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
FOC84_28980	COG1464	Belongs to the NlpA lipoprotein family
FOC84_28990	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FOC84_29020	COG1408	metallophosphoesterase
FOC84_29030	COG0688	phosphatidylethanolamine metabolic process
FOC84_29055	COG0583	DNA-binding transcription factor activity
FOC84_29070	COG0488	(ABC) transporter
FOC84_29100	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FOC84_29105	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FOC84_29110	COG2203	Gaf domain
FOC84_29110	COG2200	EAL domain
FOC84_29110	COG2199	diguanylate cyclase activity
FOC84_29115	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FOC84_29130	COG2814	Major facilitator Superfamily
FOC84_29145	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
FOC84_29150	COG2204	response regulator
FOC84_29155	COG2204	response regulator
FOC84_29195	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FOC84_29205	COG1289	transmembrane transporter activity
FOC84_29210	COG3300	MHYT domain
FOC84_29210	COG5001	Diguanylate cyclase
FOC84_29240	COG1253	flavin adenine dinucleotide binding
FOC84_29255	COG1262	PFAM Formylglycine-generating sulfatase enzyme
FOC84_29260	COG0714	Associated with various cellular activities
FOC84_29295	COG3119	arylsulfatase activity
FOC84_29310	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
FOC84_29330	COG2205	protein histidine kinase activity
FOC84_29340	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
FOC84_29375	COG3706	GGDEF domain
FOC84_29390	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
FOC84_29395	COG0628	permease
FOC84_29405	COG1619	proteins homologs of microcin C7 resistance protein MccF
FOC84_29420	COG0583	DNA-binding transcription factor activity
FOC84_29470	COG1960	acyl-CoA dehydrogenase activity
FOC84_29480	COG0531	amino acid
FOC84_29495	COG0625	glutathione transferase activity
FOC84_29520	COG1024	Enoyl-CoA hydratase
FOC84_29525	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC84_29530	COG0154	amidase activity
FOC84_29540	COG2186	Transcriptional regulator
FOC84_29545	COG2271	Major facilitator Superfamily
FOC84_29565	COG1595	DNA-templated transcription, initiation
FOC84_29570	COG3712	iron ion homeostasis
FOC84_29575	COG4772	TonB-dependent receptor
FOC84_29585	COG4774	siderophore transport
FOC84_29600	COG0431	NADPH-dependent FMN reductase
FOC84_29610	COG0798	PFAM Bile acid sodium symporter
FOC84_29630	COG0745	RESPONSE REGULATOR receiver
FOC84_29640	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FOC84_29675	COG0596	Alpha beta hydrolase
FOC84_29680	COG0045	succinate-CoA ligase (ADP-forming) activity
FOC84_29680	COG1042	CoA-binding domain protein
FOC84_29680	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOC84_29730	COG3842	ATPase activity
FOC84_29735	COG1012	belongs to the aldehyde dehydrogenase family
FOC84_29740	COG0395	ABC-type sugar transport system, permease component
FOC84_29770	COG1414	Transcriptional regulator
FOC84_29780	COG0477	Major facilitator Superfamily
FOC84_29790	COG1012	belongs to the aldehyde dehydrogenase family
FOC84_29865	COG1028	Short-chain dehydrogenase reductase Sdr
FOC84_29870	COG0477	Major facilitator Superfamily
FOC84_29880	COG0583	DNA-binding transcription factor activity
FOC84_29885	COG1335	isochorismatase
FOC84_29890	COG0583	DNA-binding transcription factor activity
FOC84_29905	COG0179	Fumarylacetoacetate (FAA) hydrolase
FOC84_29915	COG1262	PFAM Formylglycine-generating sulfatase enzyme
FOC84_29935	COG0583	DNA-binding transcription factor activity
FOC84_29945	COG1304	FMN binding
FOC84_29950	COG1309	transcriptional regulator
FOC84_29980	COG0583	DNA-binding transcription factor activity
FOC84_29990	COG0154	amidase activity
FOC84_30000	COG4948	Mandelate Racemase Muconate Lactonizing
FOC84_30005	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_30010	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
FOC84_30015	COG0066	3-isopropylmalate dehydratase activity
FOC84_30025	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_30030	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC84_30040	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_30050	COG1802	Transcriptional regulator
FOC84_30055	COG0583	DNA-binding transcription factor activity
FOC84_30065	COG2301	Belongs to the HpcH HpaI aldolase family
FOC84_30070	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC84_30085	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FOC84_30090	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_30100	COG3485	protocatechuate 3,4-dioxygenase
FOC84_30105	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_30115	COG0583	DNA-binding transcription factor activity
FOC84_30125	COG2199	diguanylate cyclase activity
FOC84_30125	COG2202	Pas domain
FOC84_30125	COG2200	EAL domain
FOC84_30130	COG2205	protein histidine kinase activity
FOC84_30130	COG0784	Response regulator, receiver
FOC84_30135	COG2197	response regulator
FOC84_30150	COG2205	protein histidine kinase activity
FOC84_30150	COG0784	Response regulator, receiver
FOC84_30165	COG0747	negative chemotaxis
FOC84_30175	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOC84_30180	COG0444	Belongs to the ABC transporter superfamily
FOC84_30185	COG4608	Belongs to the ABC transporter superfamily
FOC84_30195	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FOC84_30215	COG0028	Belongs to the TPP enzyme family
FOC84_30225	COG1012	belongs to the aldehyde dehydrogenase family
FOC84_30235	COG0235	Class ii aldolase
FOC84_30245	COG0583	DNA-binding transcription factor activity
FOC84_30255	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_30265	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FOC84_30285	COG0583	DNA-binding transcription factor activity
FOC84_30290	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
FOC84_30295	COG0390	transport system, permease component
FOC84_30300	COG1125	glycine betaine transport
FOC84_30300	COG0517	IMP dehydrogenase activity
FOC84_30305	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FOC84_30310	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FOC84_30315	COG1538	Outer membrane efflux protein
FOC84_30325	COG3486	L-lysine 6-monooxygenase (NADPH) activity
FOC84_30365	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
FOC84_30370	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOC84_30375	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOC84_30380	COG1120	ATPase activity
FOC84_30390	COG1126	abc transporter atp-binding protein
FOC84_30395	COG0765	amino acid transport
FOC84_30405	COG0583	DNA-binding transcription factor activity
FOC84_30420	COG0765	amino acid transport
FOC84_30425	COG0010	Belongs to the arginase family
FOC84_30430	COG1126	abc transporter atp-binding protein
FOC84_30455	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FOC84_30460	COG2267	carboxylic ester hydrolase activity
FOC84_30470	COG0346	lactoylglutathione lyase activity
FOC84_30485	COG0028	Belongs to the TPP enzyme family
FOC84_30495	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FOC84_30505	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FOC84_30525	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
FOC84_30555	COG4566	intracellular signal transduction
FOC84_30575	COG0583	DNA-binding transcription factor activity
FOC84_30590	COG1126	abc transporter atp-binding protein
FOC84_30600	COG0765	amino acid transport
FOC84_30630	COG3321	synthase
FOC84_30630	COG1028	Short-chain dehydrogenase reductase Sdr
FOC84_30630	COG0604	alcohol dehydrogenase
FOC84_30650	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOC84_30655	COG0318	PFAM AMP-dependent synthetase and ligase
FOC84_30665	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
FOC84_30675	COG0346	lactoylglutathione lyase activity
FOC84_30685	COG0583	DNA-binding transcription factor activity
FOC84_30700	COG1309	transcriptional regulator
FOC84_30710	COG1028	Short-chain dehydrogenase reductase Sdr
FOC84_30715	COG1960	acyl-CoA dehydrogenase activity
FOC84_30730	COG0583	DNA-binding transcription factor activity
FOC84_30765	COG1802	Transcriptional regulator
FOC84_30770	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FOC84_30775	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_30785	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
FOC84_30805	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FOC84_30810	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FOC84_30815	COG1116	anion transmembrane transporter activity
FOC84_30855	COG1595	DNA-templated transcription, initiation
FOC84_30860	COG1028	Short-chain dehydrogenase reductase Sdr
FOC84_30865	COG3154	lipid carrier protein
FOC84_30870	COG0826	peptidase U32
FOC84_30875	COG0826	peptidase U32
FOC84_30880	COG2197	response regulator
FOC84_30885	COG3850	Histidine kinase
FOC84_30890	COG1763	Mo-molybdopterin cofactor biosynthetic process
FOC84_30895	COG0288	reversible hydration of carbon dioxide
FOC84_30905	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FOC84_30910	COG2181	nitrate reductase activity
FOC84_30915	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
FOC84_30920	COG1140	nitrate reductase beta subunit
FOC84_30925	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
FOC84_30930	COG2223	nitrite transmembrane transporter activity
FOC84_30960	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FOC84_30965	COG0583	DNA-binding transcription factor activity
FOC84_31055	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
FOC84_31060	COG1414	Transcriptional regulator
FOC84_31065	COG1309	transcriptional regulator
FOC84_31080	COG1021	2,3-dihydroxybenzoate-AMP ligase
FOC84_31095	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_31100	COG0583	DNA-binding transcription factor activity
FOC84_31145	COG2070	2-Nitropropane dioxygenase
FOC84_31160	COG2205	protein histidine kinase activity
FOC84_31165	COG0745	RESPONSE REGULATOR receiver
FOC84_31170	COG4117	Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein)
FOC84_31175	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
FOC84_31190	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FOC84_31200	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FOC84_31205	COG0583	DNA-binding transcription factor activity
FOC84_31215	COG2814	Major facilitator Superfamily
FOC84_31230	COG3712	iron ion homeostasis
FOC84_31235	COG1595	DNA-templated transcription, initiation
FOC84_31250	COG0783	Belongs to the Dps family
FOC84_31285	COG2879	small protein
FOC84_31290	COG1966	Carbon starvation protein
FOC84_31310	COG4521	taurine ABC transporter
FOC84_31315	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
FOC84_31320	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FOC84_31340	COG0523	cobalamin synthesis protein
FOC84_31345	COG1228	amidohydrolase
FOC84_31360	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOC84_31365	COG0601	transmembrane transport
FOC84_31385	COG1414	Transcriptional regulator
FOC84_31390	COG0513	Belongs to the DEAD box helicase family
FOC84_31415	COG4932	domain protein
FOC84_31415	COG1388	LysM domain
FOC84_31415	COG2373	Large extracellular alpha-helical protein
FOC84_31420	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC84_31430	COG0840	transmembrane signaling receptor activity
FOC84_31440	COG2814	Major facilitator Superfamily
FOC84_31445	COG0386	Belongs to the glutathione peroxidase family
FOC84_31450	COG1522	sequence-specific DNA binding
FOC84_31460	COG0625	glutathione transferase activity
FOC84_31485	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FOC84_31490	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
FOC84_31495	COG0010	Belongs to the arginase family
FOC84_31500	COG1126	abc transporter atp-binding protein
FOC84_31510	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC84_31530	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
FOC84_31535	COG1609	Transcriptional regulator
FOC84_31540	COG0154	amidase activity
FOC84_31550	COG1137	ATPase activity
FOC84_31570	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC84_31575	COG1024	Enoyl-CoA hydratase
FOC84_31585	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
FOC84_31600	COG0084	hydrolase, TatD family'
FOC84_31605	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
FOC84_31610	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
FOC84_31615	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
FOC84_31640	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
FOC84_31645	COG1960	acyl-CoA dehydrogenase activity
FOC84_31650	COG2914	Belongs to the UPF0125 (RnfH) family
FOC84_31655	COG2867	negative regulation of translational initiation
FOC84_31660	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
FOC84_31670	COG0330	HflC and HflK could
FOC84_31680	COG0518	GMP synthase (glutamine-hydrolyzing) activity
FOC84_31680	COG0519	Catalyzes the synthesis of GMP from XMP
FOC84_31685	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FOC84_31685	COG2169	Transcriptional regulator
FOC84_31710	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FOC84_31715	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
FOC84_31730	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
FOC84_31735	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FOC84_31740	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
FOC84_31745	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FOC84_31750	COG0750	zinc metalloprotease
FOC84_31755	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
FOC84_31760	COG0575	Belongs to the CDS family
FOC84_31765	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
FOC84_31770	COG0233	cytoplasmic translational termination
FOC84_31775	COG0528	UMP kinase activity
FOC84_31780	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
FOC84_31785	COG0052	Belongs to the universal ribosomal protein uS2 family
FOC84_31790	COG0024	Methionine aminopeptidase
FOC84_31795	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
FOC84_31805	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
FOC84_31815	COG1451	nucleotide metabolic process
FOC84_31835	COG0285	dihydrofolate synthase activity
FOC84_31845	COG3181	Tripartite tricarboxylate transporter family receptor
FOC84_31850	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC84_31865	COG1334	flagellar protein FlaG
FOC84_31890	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
FOC84_31900	COG1677	Flagellar hook-basal body complex protein FliE
FOC84_31910	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FOC84_31915	COG1317	bacterial-type flagellum organization
FOC84_31920	COG1157	protein secretion by the type III secretion system
FOC84_31935	COG1580	Controls the rotational direction of flagella during chemotaxis
FOC84_31945	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FOC84_31960	COG1987	bacterial-type flagellum assembly
FOC84_31970	COG0840	transmembrane signaling receptor activity
FOC84_31990	COG0840	transmembrane signaling receptor activity
FOC84_32000	COG1256	bacterial-type flagellum assembly
FOC84_32005	COG3951	Flagellar rod assembly protein muramidase FlgJ
FOC84_32005	COG1705	Flagellar rod assembly protein muramidase FlgJ
FOC84_32025	COG4787	bacterial-type flagellum-dependent cell motility
FOC84_32040	COG1558	bacterial-type flagellum-dependent cell motility
FOC84_32045	COG1815	bacterial-type flagellum-dependent cell motility
FOC84_32070	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
FOC84_32080	COG0840	transmembrane signaling receptor activity
FOC84_32085	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
FOC84_32090	COG0745	RESPONSE REGULATOR receiver
FOC84_32095	COG2201	protein-glutamate methylesterase activity
FOC84_32100	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
FOC84_32105	COG0840	transmembrane signaling receptor activity
FOC84_32110	COG0835	chemotaxis
FOC84_32120	COG0745	RESPONSE REGULATOR receiver
FOC84_32125	COG1360	Flagellar Motor Protein
FOC84_32145	COG1191	sigma factor activity
FOC84_32155	COG4797	methyltransferase
FOC84_32155	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
FOC84_32180	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FOC84_32185	COG0508	dehydrogenase complex catalyzes the overall conversion of
FOC84_32200	COG4566	intracellular signal transduction
FOC84_32205	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
FOC84_32210	COG0339	signal peptide processing
FOC84_32220	COG1999	signal sequence binding
FOC84_32245	COG0583	DNA-binding transcription factor activity
FOC84_32250	COG1187	pseudouridine synthase activity
FOC84_32295	COG3161	chorismate lyase activity
FOC84_32325	COG0066	3-isopropylmalate dehydratase activity
FOC84_32330	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
FOC84_32360	COG2188	Transcriptional regulator
FOC84_32395	COG4681	YaeQ
FOC84_32400	COG1280	lysine exporter protein (LysE YggA)
FOC84_32405	COG4172	Belongs to the ABC transporter superfamily
FOC84_32415	COG0601	transmembrane transport
FOC84_32420	COG0747	negative chemotaxis
FOC84_32430	COG0583	DNA-binding transcription factor activity
FOC84_32540	COG0668	transmembrane transport
FOC84_32545	COG0165	Argininosuccinate lyase
FOC84_32550	COG1598	PFAM Uncharacterised protein family UPF0150
FOC84_32555	COG1724	mRNA binding
FOC84_32560	COG0583	DNA-binding transcription factor activity
FOC84_32565	COG2814	Major facilitator Superfamily
FOC84_32575	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FOC84_32605	COG0477	Major facilitator Superfamily
FOC84_32640	COG0022	dehydrogenase e1 component
FOC84_32665	COG1024	Enoyl-CoA hydratase
FOC84_32670	COG2186	Transcriptional regulator
FOC84_32675	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC84_32680	COG0789	Transcriptional regulator
FOC84_32690	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOC84_32700	COG2271	Major facilitator Superfamily
FOC84_32715	COG0307	riboflavin synthase, alpha
FOC84_32725	COG2186	Transcriptional regulator
FOC84_32730	COG1028	Short-chain dehydrogenase reductase Sdr
FOC84_32760	COG2366	antibiotic biosynthetic process
FOC84_32785	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
FOC84_32825	COG0583	DNA-binding transcription factor activity
FOC84_32840	COG0318	PFAM AMP-dependent synthetase and ligase
FOC84_32850	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FOC84_32900	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC84_32910	COG0583	DNA-binding transcription factor activity
FOC84_32940	COG0183	Belongs to the thiolase family
FOC84_32945	COG0318	PFAM AMP-dependent synthetase and ligase
FOC84_32950	COG2186	Transcriptional regulator
FOC84_32980	COG0583	DNA-binding transcription factor activity
FOC84_32985	COG0251	oxidation-reduction process
FOC84_33005	COG0583	DNA-binding transcription factor activity
FOC84_33020	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FOC84_33025	COG1595	DNA-templated transcription, initiation
FOC84_33030	COG3712	iron ion homeostasis
FOC84_33050	COG0640	Transcriptional regulator
FOC84_33065	COG1028	Short-chain dehydrogenase reductase Sdr
FOC84_33075	COG0411	ABC transporter
FOC84_33110	COG1802	Transcriptional regulator
FOC84_33115	COG5265	(ABC) transporter
FOC84_33120	COG1280	lysine exporter protein (LysE YggA)
FOC84_33135	COG4977	sequence-specific DNA binding
FOC84_33160	COG2188	Transcriptional regulator
FOC84_33175	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
FOC84_33190	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
FOC84_33195	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC84_33200	COG1960	acyl-CoA dehydrogenase activity
FOC84_33205	COG1960	acyl-CoA dehydrogenase activity
FOC84_33210	COG0477	Major facilitator Superfamily
FOC84_33230	COG0477	Major facilitator Superfamily
FOC84_33235	COG0235	Class ii aldolase
FOC84_33245	COG1051	belongs to the nudix hydrolase family
FOC84_33250	COG0583	DNA-binding transcription factor activity
FOC84_33270	COG2610	gluconate transmembrane transporter activity
FOC84_33275	COG0583	DNA-binding transcription factor activity
FOC84_33280	COG1028	Short-chain dehydrogenase reductase Sdr
FOC84_33285	COG1024	Enoyl-CoA hydratase
FOC84_33290	COG5001	Diguanylate cyclase
FOC84_33295	COG3181	Tripartite tricarboxylate transporter family receptor