locus-tag class description H4P35_00005 PF00308 Bacterial dnaA protein H4P35_00005 PF08299 Bacterial dnaA protein helix-turn-helix H4P35_00005 PF11638 DnaA N-terminal domain H4P35_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain H4P35_00010 PF02767 DNA polymerase III beta subunit, central domain H4P35_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain H4P35_00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4P35_00015 PF18053 DNA gyrase B subunit insert domain H4P35_00015 PF01751 Toprim domain H4P35_00015 PF00204 DNA gyrase B H4P35_00015 PF00986 DNA gyrase B subunit, carboxyl terminus H4P35_00020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_00020 PF03466 LysR substrate binding domain H4P35_00025 PF00497 Bacterial extracellular solute-binding proteins, family 3 H4P35_00030 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_00035 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_00040 PF00005 ABC transporter H4P35_00045 PF01212 Beta-eliminating lyase H4P35_00050 PF00892 EamA-like transporter family H4P35_00055 PF00708 Acylphosphatase H4P35_00065 PF01070 FMN-dependent dehydrogenase H4P35_00075 PF08402 TOBE domain H4P35_00075 PF00005 ABC transporter H4P35_00080 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_00085 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_00095 PF04324 BFD-like [2Fe-2S] binding domain H4P35_00095 PF07992 Pyridine nucleotide-disulphide oxidoreductase H4P35_00110 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H4P35_00120 PF03466 LysR substrate binding domain H4P35_00120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_00125 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_00130 PF05378 Hydantoinase/oxoprolinase N-terminal region H4P35_00130 PF01968 Hydantoinase/oxoprolinase H4P35_00140 PF00392 Bacterial regulatory proteins, gntR family H4P35_00150 PF00005 ABC transporter H4P35_00150 PF08402 TOBE domain H4P35_00155 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_00160 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_00165 PF01266 FAD dependent oxidoreductase H4P35_00175 PF07992 Pyridine nucleotide-disulphide oxidoreductase H4P35_00175 PF04324 BFD-like [2Fe-2S] binding domain H4P35_00180 PF01593 Flavin containing amine oxidoreductase H4P35_00185 PF01042 Endoribonuclease L-PSP H4P35_00190 PF07969 Amidohydrolase family H4P35_00195 PF02653 Branched-chain amino acid transport system / permease component H4P35_00200 PF02653 Branched-chain amino acid transport system / permease component H4P35_00205 PF00005 ABC transporter H4P35_00210 PF02608 ABC transporter substrate-binding protein PnrA-like H4P35_00220 PF02558 Ketopantoate reductase PanE/ApbA H4P35_00220 PF08546 Ketopantoate reductase PanE/ApbA C terminal H4P35_00235 PF01613 Flavin reductase like domain H4P35_00250 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase H4P35_00260 PF01062 Bestrophin, RFP-TM, chloride channel H4P35_00265 PF01037 Lrp/AsnC ligand binding domain H4P35_00270 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain H4P35_00270 PF00205 Thiamine pyrophosphate enzyme, central domain H4P35_00270 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain H4P35_00280 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_00285 PF00005 ABC transporter H4P35_00295 PF01751 Toprim domain H4P35_00295 PF01131 DNA topoisomerase H4P35_00305 PF00749 tRNA synthetases class I (E and Q), catalytic domain H4P35_00310 PF04361 Protein of unknown function (DUF494) H4P35_00320 PF16868 NMT1-like family H4P35_00325 PF14031 Putative serine dehydratase domain H4P35_00325 PF01168 Alanine racemase, N-terminal domain H4P35_00340 PF00005 ABC transporter H4P35_00345 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_00350 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_00355 PF00497 Bacterial extracellular solute-binding proteins, family 3 H4P35_00360 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_00365 PF00202 Aminotransferase class-III H4P35_00370 PF02371 Transposase IS116/IS110/IS902 family H4P35_00370 PF01548 Transposase H4P35_00420 PF04542 Sigma-70 region 2 H4P35_00420 PF08281 Sigma-70, region 4 H4P35_00425 PF00199 Catalase H4P35_00465 PF05977 Transmembrane secretion effector H4P35_00470 PF00289 Biotin carboxylase, N-terminal domain H4P35_00470 PF02785 Biotin carboxylase C-terminal domain H4P35_00470 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain H4P35_00470 PF00364 Biotin-requiring enzyme H4P35_00475 PF01039 Carboxyl transferase domain H4P35_00480 PF02803 Thiolase, C-terminal domain H4P35_00480 PF00108 Thiolase, N-terminal domain H4P35_00485 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) H4P35_00490 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H4P35_00490 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H4P35_00490 PF02770 Acyl-CoA dehydrogenase, middle domain H4P35_00495 PF01546 Peptidase family M20/M25/M40 H4P35_00495 PF07687 Peptidase dimerisation domain H4P35_00500 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_00505 PF02694 Uncharacterised BCR, YnfA/UPF0060 family H4P35_00510 PF00376 MerR family regulatory protein H4P35_00510 PF09278 MerR, DNA binding H4P35_00515 PF00753 Metallo-beta-lactamase superfamily H4P35_00520 PF01810 LysE type translocator H4P35_00530 PF01053 Cys/Met metabolism PLP-dependent enzyme H4P35_00545 PF01323 DSBA-like thioredoxin domain H4P35_00545 PF00085 Thioredoxin H4P35_00555 PF03485 Arginyl tRNA synthetase N terminal domain H4P35_00555 PF05746 DALR anticodon binding domain H4P35_00555 PF00750 tRNA synthetases class I (R) H4P35_00575 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_00580 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_00585 PF13416 Bacterial extracellular solute-binding protein H4P35_00590 PF00005 ABC transporter H4P35_00590 PF08402 TOBE domain H4P35_00595 PF00149 Calcineurin-like phosphoesterase H4P35_00600 PF00356 Bacterial regulatory proteins, lacI family H4P35_00605 PF01425 Amidase H4P35_00610 PF08502 LeuA allosteric (dimerisation) domain H4P35_00610 PF00682 HMGL-like H4P35_00620 PF00309 Sigma-54 factor, Activator interacting domain (AID) H4P35_00620 PF04552 Sigma-54, DNA binding domain H4P35_00620 PF04963 Sigma-54 factor, core binding domain H4P35_00630 PF03466 LysR substrate binding domain H4P35_00630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_00640 PF00210 Ferritin-like domain H4P35_00650 PF03144 Elongation factor Tu domain 2 H4P35_00650 PF16658 Class II release factor RF3, C-terminal domain H4P35_00650 PF00009 Elongation factor Tu GTP binding domain H4P35_00655 PF01810 LysE type translocator H4P35_00660 PF00270 DEAD/DEAH box helicase H4P35_00660 PF00271 Helicase conserved C-terminal domain H4P35_00665 PF06097 Bacterial protein of unknown function (DUF945) H4P35_00680 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H4P35_00680 PF00005 ABC transporter H4P35_00685 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_00685 PF12911 N-terminal TM domain of oligopeptide transport permease C H4P35_00690 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_00695 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H4P35_00700 PF12631 MnmE helical domain H4P35_00700 PF10396 GTP-binding protein TrmE N-terminus H4P35_00700 PF01926 50S ribosome-binding GTPase H4P35_00710 PF06445 GyrI-like small molecule binding domain H4P35_00710 PF12833 Helix-turn-helix domain H4P35_00715 PF00892 EamA-like transporter family H4P35_00720 PF00266 Aminotransferase class-V H4P35_00730 PF03466 LysR substrate binding domain H4P35_00730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_00740 PF02447 GntP family permease H4P35_00760 PF04386 Stringent starvation protein B H4P35_00765 PF00043 Glutathione S-transferase, C-terminal domain H4P35_00765 PF02798 Glutathione S-transferase, N-terminal domain H4P35_00770 PF02167 Cytochrome C1 family H4P35_00775 PF00032 Cytochrome b(C-terminal)/b6/petD H4P35_00775 PF00033 Cytochrome b/b6/petB H4P35_00780 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal H4P35_00780 PF00355 Rieske [2Fe-2S] domain H4P35_00785 PF01741 Large-conductance mechanosensitive channel, MscL H4P35_00790 PF01784 NIF3 (NGG1p interacting factor 3) H4P35_00795 PF13180 PDZ domain H4P35_00805 PF00902 Sec-independent protein translocase protein (TatC) H4P35_00810 PF02416 mttA/Hcf106 family H4P35_00815 PF02416 mttA/Hcf106 family H4P35_00820 PF01230 HIT domain H4P35_00825 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase H4P35_00830 PF01502 Phosphoribosyl-AMP cyclohydrolase H4P35_00835 PF00977 Histidine biosynthesis protein H4P35_00840 PF00977 Histidine biosynthesis protein H4P35_00845 PF00117 Glutamine amidotransferase class-I H4P35_00850 PF00475 Imidazoleglycerol-phosphate dehydratase H4P35_00855 PF00155 Aminotransferase class I and II H4P35_00860 PF00815 Histidinol dehydrogenase H4P35_00865 PF01634 ATP phosphoribosyltransferase H4P35_00870 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) H4P35_00880 PF01061 ABC-2 type transporter H4P35_00885 PF00005 ABC transporter H4P35_00895 PF04333 MlaA lipoprotein H4P35_00900 PF02470 MlaD protein H4P35_00905 PF02405 Permease MlaE H4P35_00910 PF00005 ABC transporter H4P35_00915 PF03060 Nitronate monooxygenase H4P35_00920 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_00925 PF06779 Uncharacterised MFS-type transporter YbfB H4P35_00930 PF03466 LysR substrate binding domain H4P35_00930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_00935 PF03922 OmpW family H4P35_00940 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster H4P35_00940 PF07992 Pyridine nucleotide-disulphide oxidoreductase H4P35_00945 PF00310 Glutamine amidotransferases class-II H4P35_00945 PF04898 Glutamate synthase central domain H4P35_00945 PF01645 Conserved region in glutamate synthase H4P35_00945 PF01493 GXGXG motif H4P35_00955 PF00756 Putative esterase H4P35_00965 PF00140 Sigma-70 factor, region 1.2 H4P35_00965 PF04542 Sigma-70 region 2 H4P35_00965 PF04545 Sigma-70, region 4 H4P35_00970 PF00149 Calcineurin-like phosphoesterase H4P35_00975 PF00999 Sodium/hydrogen exchanger family H4P35_00985 PF00116 Cytochrome C oxidase subunit II, periplasmic domain H4P35_00985 PF02790 Cytochrome C oxidase subunit II, transmembrane domain H4P35_00990 PF00115 Cytochrome C and Quinol oxidase polypeptide I H4P35_01000 PF00510 Cytochrome c oxidase subunit III H4P35_01020 PF02628 Cytochrome oxidase assembly protein H4P35_01025 PF01040 UbiA prenyltransferase family H4P35_01030 PF02630 SCO1/SenC H4P35_01050 PF00132 Bacterial transferase hexapeptide (six repeats) H4P35_01050 PF14602 Hexapeptide repeat of succinyl-transferase H4P35_01050 PF12804 MobA-like NTP transferase domain H4P35_01055 PF07690 Major Facilitator Superfamily H4P35_01060 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain H4P35_01060 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain H4P35_01060 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain H4P35_01080 PF01037 Lrp/AsnC ligand binding domain H4P35_01085 PF01380 SIS domain H4P35_01090 PF00563 EAL domain H4P35_01090 PF00990 Diguanylate cyclase, GGDEF domain H4P35_01090 PF03707 Bacterial signalling protein N terminal repeat H4P35_01105 PF05977 Transmembrane secretion effector H4P35_01115 PF00392 Bacterial regulatory proteins, gntR family H4P35_01115 PF00155 Aminotransferase class I and II H4P35_01120 PF00072 Response regulator receiver domain H4P35_01125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4P35_01125 PF00512 His Kinase A (phospho-acceptor) domain H4P35_01125 PF01627 Hpt domain H4P35_01125 PF00072 Response regulator receiver domain H4P35_01125 PF00497 Bacterial extracellular solute-binding proteins, family 3 H4P35_01135 PF02653 Branched-chain amino acid transport system / permease component H4P35_01135 PF11862 Domain of unknown function (DUF3382) H4P35_01145 PF00005 ABC transporter H4P35_01145 PF12399 Branched-chain amino acid ATP-binding cassette transporter H4P35_01150 PF00005 ABC transporter H4P35_01155 PF03069 Acetamidase/Formamidase family H4P35_01165 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component H4P35_01180 PF01425 Amidase H4P35_01190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_01190 PF03466 LysR substrate binding domain H4P35_01195 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_01210 PF01717 Cobalamin-independent synthase, Catalytic domain H4P35_01210 PF08267 Cobalamin-independent synthase, N-terminal domain H4P35_01220 PF03358 NADPH-dependent FMN reductase H4P35_01225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_01225 PF03466 LysR substrate binding domain H4P35_01230 PF00196 Bacterial regulatory proteins, luxR family H4P35_01230 PF00072 Response regulator receiver domain H4P35_01235 PF00072 Response regulator receiver domain H4P35_01235 PF13426 PAS domain H4P35_01235 PF08448 PAS fold H4P35_01235 PF00512 His Kinase A (phospho-acceptor) domain H4P35_01235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4P35_01240 PF05977 Transmembrane secretion effector H4P35_01260 PF07969 Amidohydrolase family H4P35_01265 PF13609 Gram-negative porin H4P35_01270 PF00672 HAMP domain H4P35_01270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H4P35_01270 PF02203 Tar ligand binding domain homologue H4P35_01275 PF00486 Transcriptional regulatory protein, C terminal H4P35_01275 PF00072 Response regulator receiver domain H4P35_01280 PF08521 Two-component sensor kinase N-terminal H4P35_01280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4P35_01280 PF00512 His Kinase A (phospho-acceptor) domain H4P35_01285 PF12951 Passenger-associated-transport-repeat H4P35_01290 PF13411 MerR HTH family regulatory protein H4P35_01295 PF02469 Fasciclin domain H4P35_01305 PF00561 alpha/beta hydrolase fold H4P35_01320 PF03466 LysR substrate binding domain H4P35_01320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_01325 PF03741 Integral membrane protein TerC family H4P35_01365 PF00384 Molybdopterin oxidoreductase H4P35_01370 PF00654 Voltage gated chloride channel H4P35_01375 PF03783 Curli production assembly/transport component CsgG H4P35_01385 PF05643 Putative bacterial lipoprotein (DUF799) H4P35_01390 PF01425 Amidase H4P35_01395 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_01400 PF03466 LysR substrate binding domain H4P35_01400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_01405 PF00248 Aldo/keto reductase family H4P35_01410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_01410 PF03466 LysR substrate binding domain H4P35_01420 PF07690 Major Facilitator Superfamily H4P35_01425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_01425 PF03466 LysR substrate binding domain H4P35_01430 PF08240 Alcohol dehydrogenase GroES-like domain H4P35_01430 PF00107 Zinc-binding dehydrogenase H4P35_01435 PF02423 Ornithine cyclodeaminase/mu-crystallin family H4P35_01440 PF00795 Carbon-nitrogen hydrolase H4P35_01445 PF12792 CSS motif domain associated with EAL H4P35_01445 PF00563 EAL domain H4P35_01455 PF02146 Sir2 family H4P35_01470 PF00563 EAL domain H4P35_01470 PF00990 Diguanylate cyclase, GGDEF domain H4P35_01470 PF08447 PAS fold H4P35_01470 PF08448 PAS fold H4P35_01475 PF01926 50S ribosome-binding GTPase H4P35_01490 PF08240 Alcohol dehydrogenase GroES-like domain H4P35_01490 PF00107 Zinc-binding dehydrogenase H4P35_01495 PF02583 Metal-sensitive transcriptional repressor H4P35_01500 PF05962 HutD H4P35_01505 PF00672 HAMP domain H4P35_01505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H4P35_01505 PF02203 Tar ligand binding domain homologue H4P35_01510 PF07690 Major Facilitator Superfamily H4P35_01555 PF00392 Bacterial regulatory proteins, gntR family H4P35_01555 PF07729 FCD domain H4P35_01570 PF00171 Aldehyde dehydrogenase family H4P35_01575 PF03928 Haem-degrading H4P35_01580 PF00970 Oxidoreductase FAD-binding domain H4P35_01580 PF00111 2Fe-2S iron-sulfur cluster binding domain H4P35_01580 PF00175 Oxidoreductase NAD-binding domain H4P35_01585 PF00582 Universal stress protein family H4P35_01590 PF11737 Protein of unknown function (DUF3300) H4P35_01615 PF03061 Thioesterase superfamily H4P35_01630 PF09163 Formate dehydrogenase N, transmembrane H4P35_01630 PF12800 4Fe-4S binding domain H4P35_01630 PF13247 4Fe-4S dicluster domain H4P35_01635 PF01292 Prokaryotic cytochrome b561 H4P35_01640 PF04216 Protein involved in formate dehydrogenase formation H4P35_01645 PF12390 Selenocysteine synthase N terminal H4P35_01645 PF03841 L-seryl-tRNA selenium transferase H4P35_01650 PF03144 Elongation factor Tu domain 2 H4P35_01650 PF09106 Elongation factor SelB, winged helix H4P35_01650 PF09107 Elongation factor SelB, winged helix H4P35_01650 PF00009 Elongation factor Tu GTP binding domain H4P35_01660 PF00578 AhpC/TSA family H4P35_01665 PF01841 Transglutaminase-like superfamily H4P35_01670 PF02769 AIR synthase related protein, C-terminal domain H4P35_01670 PF00586 AIR synthase related protein, N-terminal domain H4P35_01675 PF03466 LysR substrate binding domain H4P35_01675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_01685 PF01323 DSBA-like thioredoxin domain H4P35_01700 PF00171 Aldehyde dehydrogenase family H4P35_01705 PF00158 Sigma-54 interaction domain H4P35_01705 PF01590 GAF domain H4P35_01705 PF02954 Bacterial regulatory protein, Fis family H4P35_01710 PF00218 Indole-3-glycerol phosphate synthase H4P35_01715 PF00591 Glycosyl transferase family, a/b domain H4P35_01715 PF02885 Glycosyl transferase family, helical bundle domain H4P35_01720 PF00117 Glutamine amidotransferase class-I H4P35_01725 PF04715 Anthranilate synthase component I, N terminal region H4P35_01725 PF00425 chorismate binding enzyme H4P35_01730 PF13419 Haloacid dehalogenase-like hydrolase H4P35_01735 PF00834 Ribulose-phosphate 3 epimerase family H4P35_01740 PF04379 ApaG domain H4P35_01745 PF06725 3D domain H4P35_01745 PF03562 MltA specific insert domain H4P35_01750 PF01494 FAD binding domain H4P35_01755 PF10411 Disulfide bond isomerase protein N-terminus H4P35_01755 PF13098 Thioredoxin-like domain H4P35_01760 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H4P35_01760 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain H4P35_01760 PF01842 ACT domain H4P35_01765 PF01171 PP-loop family H4P35_01775 PF07992 Pyridine nucleotide-disulphide oxidoreductase H4P35_01800 PF13180 PDZ domain H4P35_01805 PF00378 Enoyl-CoA hydratase/isomerase H4P35_01820 PF00119 ATP synthase A chain H4P35_01825 PF00137 ATP synthase subunit C H4P35_01830 PF00430 ATP synthase B/B' CF(0) H4P35_01835 PF00213 ATP synthase delta (OSCP) subunit H4P35_01840 PF00306 ATP synthase alpha/beta chain, C terminal domain H4P35_01840 PF02874 ATP synthase alpha/beta family, beta-barrel domain H4P35_01840 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain H4P35_01845 PF00231 ATP synthase H4P35_01850 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain H4P35_01850 PF02874 ATP synthase alpha/beta family, beta-barrel domain H4P35_01855 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain H4P35_01865 PF01208 Uroporphyrinogen decarboxylase (URO-D) H4P35_01870 PF17764 3′ DNA-binding domain (3′BD) H4P35_01870 PF18074 Primosomal protein N C-terminal domain H4P35_01870 PF18319 PriA DNA helicase Cys-rich region (CRR) domain H4P35_01870 PF00271 Helicase conserved C-terminal domain H4P35_01870 PF00270 DEAD/DEAH box helicase H4P35_01875 PF00580 UvrD/REP helicase N-terminal domain H4P35_01875 PF13361 UvrD-like helicase C-terminal domain H4P35_01880 PF01380 SIS domain H4P35_01890 PF14602 Hexapeptide repeat of succinyl-transferase H4P35_01890 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle H4P35_01895 PF01546 Peptidase family M20/M25/M40 H4P35_01895 PF07687 Peptidase dimerisation domain H4P35_01905 PF00005 ABC transporter H4P35_01905 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H4P35_01910 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H4P35_01910 PF00005 ABC transporter H4P35_01915 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_01915 PF12911 N-terminal TM domain of oligopeptide transport permease C H4P35_01920 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_01925 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family H4P35_01930 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H4P35_01940 PF01256 Carbohydrate kinase H4P35_01945 PF00378 Enoyl-CoA hydratase/isomerase H4P35_01950 PF00378 Enoyl-CoA hydratase/isomerase H4P35_01955 PF03060 Nitronate monooxygenase H4P35_01965 PF02770 Acyl-CoA dehydrogenase, middle domain H4P35_01965 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H4P35_01965 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H4P35_01970 PF02515 CoA-transferase family III H4P35_01975 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain H4P35_01975 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain H4P35_01975 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain H4P35_01980 PF13442 Cytochrome C oxidase, cbb3-type, subunit III H4P35_01990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_01990 PF03466 LysR substrate binding domain H4P35_02015 PF07883 Cupin domain H4P35_02020 PF01557 Fumarylacetoacetate (FAA) hydrolase family H4P35_02025 PF00392 Bacterial regulatory proteins, gntR family H4P35_02025 PF07729 FCD domain H4P35_02030 PF03466 LysR substrate binding domain H4P35_02030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_02035 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_02050 PF04262 Glutamate-cysteine ligase H4P35_02065 PF03472 Autoinducer binding domain H4P35_02065 PF00196 Bacterial regulatory proteins, luxR family H4P35_02075 PF02615 Malate/L-lactate dehydrogenase H4P35_02080 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H4P35_02080 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain H4P35_02085 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_02090 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus H4P35_02095 PF08666 SAF domain H4P35_02100 PF00392 Bacterial regulatory proteins, gntR family H4P35_02100 PF07702 UTRA domain H4P35_02105 PF00561 alpha/beta hydrolase fold H4P35_02110 PF00561 alpha/beta hydrolase fold H4P35_02110 PF07021 Methionine biosynthesis protein MetW H4P35_02115 PF07690 Major Facilitator Superfamily H4P35_02125 PF03458 UPF0126 domain H4P35_02130 PF00392 Bacterial regulatory proteins, gntR family H4P35_02130 PF07729 FCD domain H4P35_02135 PF03746 LamB/YcsF family H4P35_02140 PF02626 Carboxyltransferase domain, subdomain A and B H4P35_02145 PF02682 Carboxyltransferase domain, subdomain C and D H4P35_02155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_02155 PF03466 LysR substrate binding domain H4P35_02160 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain H4P35_02160 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H4P35_02160 PF01842 ACT domain H4P35_02170 PF05275 Copper resistance protein B precursor (CopB) H4P35_02175 PF00394 Multicopper oxidase H4P35_02175 PF07731 Multicopper oxidase H4P35_02175 PF07732 Multicopper oxidase H4P35_02185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4P35_02185 PF00512 His Kinase A (phospho-acceptor) domain H4P35_02185 PF00672 HAMP domain H4P35_02190 PF00486 Transcriptional regulatory protein, C terminal H4P35_02190 PF00072 Response regulator receiver domain H4P35_02195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4P35_02195 PF11808 Phosphate regulon sensor protein PhoR H4P35_02195 PF00989 PAS fold H4P35_02195 PF00512 His Kinase A (phospho-acceptor) domain H4P35_02200 PF00072 Response regulator receiver domain H4P35_02200 PF00486 Transcriptional regulatory protein, C terminal H4P35_02205 PF01209 ubiE/COQ5 methyltransferase family H4P35_02220 PF03109 ABC1 family H4P35_02230 PF01467 Cytidylyltransferase-like H4P35_02235 PF01548 Transposase H4P35_02235 PF02371 Transposase IS116/IS110/IS902 family H4P35_02240 PF00872 Transposase, Mutator family H4P35_02245 PF02321 Outer membrane efflux protein H4P35_02255 PF08543 Phosphomethylpyrimidine kinase H4P35_02260 PF05690 Thiazole biosynthesis protein ThiG H4P35_02265 PF01497 Periplasmic binding protein H4P35_02270 PF00593 TonB dependent receptor H4P35_02270 PF07715 TonB-dependent Receptor Plug Domain H4P35_02275 PF02310 B12 binding domain H4P35_02275 PF02607 B12 binding domain H4P35_02275 PF02574 Homocysteine S-methyltransferase H4P35_02275 PF00809 Pterin binding enzyme H4P35_02275 PF02965 Vitamin B12 dependent methionine synthase, activation domain H4P35_02280 PF01425 Amidase H4P35_02285 PF00392 Bacterial regulatory proteins, gntR family H4P35_02285 PF07729 FCD domain H4P35_02290 PF08240 Alcohol dehydrogenase GroES-like domain H4P35_02290 PF00107 Zinc-binding dehydrogenase H4P35_02295 PF13378 Enolase C-terminal domain-like H4P35_02295 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain H4P35_02300 PF01232 Mannitol dehydrogenase Rossmann domain H4P35_02300 PF08125 Mannitol dehydrogenase C-terminal domain H4P35_02305 PF08241 Methyltransferase domain H4P35_02315 PF00633 Helix-hairpin-helix motif H4P35_02315 PF10576 Iron-sulfur binding domain of endonuclease III H4P35_02315 PF00730 HhH-GPD superfamily base excision DNA repair protein H4P35_02315 PF14815 NUDIX domain H4P35_02340 PF13296 Putative type VI secretion system Rhs element Vgr H4P35_02340 PF04717 Type VI secretion system, phage-baseplate injector H4P35_02340 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) H4P35_02345 PF00370 FGGY family of carbohydrate kinases, N-terminal domain H4P35_02345 PF02782 FGGY family of carbohydrate kinases, C-terminal domain H4P35_02350 PF07690 Major Facilitator Superfamily H4P35_02360 PF02616 Segregation and condensation protein ScpA H4P35_02365 PF02569 Pantoate-beta-alanine ligase H4P35_02370 PF00072 Response regulator receiver domain H4P35_02370 PF00196 Bacterial regulatory proteins, luxR family H4P35_02380 PF06750 Bacterial Peptidase A24 N-terminal domain H4P35_02380 PF01478 Type IV leader peptidase family H4P35_02385 PF01121 Dephospho-CoA kinase H4P35_02390 PF07072 Cell division protein H4P35_02395 PF13533 Biotin-lipoyl like H4P35_02400 PF00873 AcrB/AcrD/AcrF family H4P35_02405 PF00873 AcrB/AcrD/AcrF family H4P35_02415 PF01425 Amidase H4P35_02420 PF00293 NUDIX domain H4P35_02430 PF01960 ArgJ family H4P35_02445 PF07859 alpha/beta hydrolase fold H4P35_02455 PF02653 Branched-chain amino acid transport system / permease component H4P35_02460 PF11862 Domain of unknown function (DUF3382) H4P35_02460 PF02653 Branched-chain amino acid transport system / permease component H4P35_02465 PF00005 ABC transporter H4P35_02465 PF12399 Branched-chain amino acid ATP-binding cassette transporter H4P35_02470 PF00005 ABC transporter H4P35_02485 PF09345 Domain of unknown function (DUF1987) H4P35_02490 PF00990 Diguanylate cyclase, GGDEF domain H4P35_02495 PF03707 Bacterial signalling protein N terminal repeat H4P35_02495 PF00990 Diguanylate cyclase, GGDEF domain H4P35_02495 PF00563 EAL domain H4P35_02500 PF01494 FAD binding domain H4P35_02510 PF00378 Enoyl-CoA hydratase/isomerase H4P35_02515 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H4P35_02515 PF02770 Acyl-CoA dehydrogenase, middle domain H4P35_02515 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H4P35_02520 PF00501 AMP-binding enzyme H4P35_02520 PF13193 AMP-binding enzyme C-terminal domain H4P35_02535 PF14525 AraC-binding-like domain H4P35_02535 PF12833 Helix-turn-helix domain H4P35_02545 PF01738 Dienelactone hydrolase family H4P35_02550 PF00355 Rieske [2Fe-2S] domain H4P35_02550 PF00848 Ring hydroxylating alpha subunit (catalytic domain) H4P35_02555 PF00866 Ring hydroxylating beta subunit H4P35_02560 PF00857 Isochorismatase family H4P35_02575 PF01464 Transglycosylase SLT domain H4P35_02580 PF00202 Aminotransferase class-III H4P35_02585 PF02581 Thiamine monophosphate synthase H4P35_02590 PF08543 Phosphomethylpyrimidine kinase H4P35_02595 PF00301 Rubredoxin H4P35_02600 PF02622 Uncharacterized ACR, COG1678 H4P35_02605 PF03652 Holliday junction resolvase H4P35_02610 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain H4P35_02610 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain H4P35_02615 PF01979 Amidohydrolase family H4P35_02620 PF01553 Acyltransferase H4P35_02625 PF00149 Calcineurin-like phosphoesterase H4P35_02635 PF00912 Transglycosylase H4P35_02640 PF01488 Shikimate / quinate 5-dehydrogenase H4P35_02640 PF18317 Shikimate 5'-dehydrogenase C-terminal domain H4P35_02640 PF08501 Shikimate dehydrogenase substrate binding domain H4P35_02650 PF00005 ABC transporter H4P35_02650 PF08402 TOBE domain H4P35_02655 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_02665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4P35_02665 PF00512 His Kinase A (phospho-acceptor) domain H4P35_02670 PF00072 Response regulator receiver domain H4P35_02670 PF00486 Transcriptional regulatory protein, C terminal H4P35_02675 PF00773 RNB domain H4P35_02680 PF05728 Uncharacterised protein family (UPF0227) H4P35_02685 PF08245 Mur ligase middle domain H4P35_02685 PF02875 Mur ligase family, glutamate ligase domain H4P35_02685 PF01225 Mur ligase family, catalytic domain H4P35_02690 PF08534 Redoxin H4P35_02695 PF01220 Dehydroquinase class II H4P35_02700 PF00364 Biotin-requiring enzyme H4P35_02705 PF00289 Biotin carboxylase, N-terminal domain H4P35_02705 PF02785 Biotin carboxylase C-terminal domain H4P35_02705 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain H4P35_02745 PF03062 MBOAT, membrane-bound O-acyltransferase family H4P35_02750 PF13193 AMP-binding enzyme C-terminal domain H4P35_02750 PF00501 AMP-binding enzyme H4P35_02765 PF00268 Ribonucleotide reductase, small chain H4P35_02770 PF00317 Ribonucleotide reductase, all-alpha domain H4P35_02770 PF03477 ATP cone domain H4P35_02770 PF02867 Ribonucleotide reductase, barrel domain H4P35_02780 PF01037 Lrp/AsnC ligand binding domain H4P35_02785 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_02795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_02795 PF03466 LysR substrate binding domain H4P35_02805 PF07690 Major Facilitator Superfamily H4P35_02810 PF00749 tRNA synthetases class I (E and Q), catalytic domain H4P35_02815 PF00583 Acetyltransferase (GNAT) family H4P35_02815 PF13607 Succinyl-CoA ligase like flavodoxin domain H4P35_02815 PF13380 CoA binding domain H4P35_02820 PF00857 Isochorismatase family H4P35_02825 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_02830 PF00005 ABC transporter H4P35_02845 PF04751 Protein of unknown function (DUF615) H4P35_02850 PF01523 Putative modulator of DNA gyrase H4P35_02855 PF03480 Bacterial extracellular solute-binding protein, family 7 H4P35_02860 PF13458 Periplasmic binding protein H4P35_02865 PF02653 Branched-chain amino acid transport system / permease component H4P35_02870 PF02653 Branched-chain amino acid transport system / permease component H4P35_02870 PF11862 Domain of unknown function (DUF3382) H4P35_02875 PF12399 Branched-chain amino acid ATP-binding cassette transporter H4P35_02875 PF00005 ABC transporter H4P35_02880 PF00005 ABC transporter H4P35_02885 PF00572 Ribosomal protein L13 H4P35_02890 PF00380 Ribosomal protein S9/S16 H4P35_02895 PF02774 Semialdehyde dehydrogenase, dimerisation domain H4P35_02895 PF01118 Semialdehyde dehydrogenase, NAD binding domain H4P35_02905 PF01521 Iron-sulphur cluster biosynthesis H4P35_02910 PF03702 Anhydro-N-acetylmuramic acid kinase H4P35_02915 PF01551 Peptidase family M23 H4P35_02915 PF08460 Bacterial SH3 domain H4P35_02920 PF01479 S4 domain H4P35_02920 PF00579 tRNA synthetases class I (W and Y) H4P35_02925 PF01161 Phosphatidylethanolamine-binding protein H4P35_02930 PF00464 Serine hydroxymethyltransferase H4P35_02935 PF03477 ATP cone domain H4P35_02940 PF12833 Helix-turn-helix domain H4P35_02950 PF01872 RibD C-terminal domain H4P35_02950 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region H4P35_02955 PF06798 PrkA serine protein kinase C-terminal domain H4P35_02955 PF08298 PrkA AAA domain H4P35_02960 PF04285 Protein of unknown function (DUF444) H4P35_02965 PF04293 SpoVR like protein H4P35_02980 PF00682 HMGL-like H4P35_02985 PF02515 CoA-transferase family III H4P35_02990 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_03000 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_03005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_03005 PF03466 LysR substrate binding domain H4P35_03020 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain H4P35_03020 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain H4P35_03025 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_03045 PF01476 LysM domain H4P35_03045 PF01464 Transglycosylase SLT domain H4P35_03050 PF16123 Hydroxyacylglutathione hydrolase C-terminus H4P35_03050 PF00753 Metallo-beta-lactamase superfamily H4P35_03055 PF08241 Methyltransferase domain H4P35_03060 PF00075 RNase H H4P35_03070 PF00873 AcrB/AcrD/AcrF family H4P35_03075 PF00929 Exonuclease H4P35_03095 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 H4P35_03110 PF03616 Sodium/glutamate symporter H4P35_03120 PF00535 Glycosyl transferase family 2 H4P35_03125 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase H4P35_03140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_03140 PF03466 LysR substrate binding domain H4P35_03155 PF03466 LysR substrate binding domain H4P35_03155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_03160 PF03788 LrgA family H4P35_03165 PF04172 LrgB-like family H4P35_03170 PF01810 LysE type translocator H4P35_03175 PF00892 EamA-like transporter family H4P35_03180 PF00155 Aminotransferase class I and II H4P35_03180 PF00392 Bacterial regulatory proteins, gntR family H4P35_03190 PF00582 Universal stress protein family H4P35_03195 PF00679 Elongation factor G C-terminus H4P35_03195 PF14492 Elongation Factor G, domain II H4P35_03195 PF03764 Elongation factor G, domain IV H4P35_03195 PF00009 Elongation factor Tu GTP binding domain H4P35_03195 PF03144 Elongation factor Tu domain 2 H4P35_03205 PF01037 Lrp/AsnC ligand binding domain H4P35_03220 PF00005 ABC transporter H4P35_03225 PF01032 FecCD transport family H4P35_03235 PF00691 OmpA family H4P35_03240 PF07676 WD40-like Beta Propeller Repeat H4P35_03240 PF04052 TolB amino-terminal domain H4P35_03250 PF02472 Biopolymer transport protein ExbD/TolR H4P35_03255 PF01618 MotA/TolQ/ExbB proton channel family H4P35_03260 PF03061 Thioesterase superfamily H4P35_03265 PF04073 Aminoacyl-tRNA editing domain H4P35_03265 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) H4P35_03265 PF03129 Anticodon binding domain H4P35_03270 PF00293 NUDIX domain H4P35_03275 PF00072 Response regulator receiver domain H4P35_03275 PF00486 Transcriptional regulatory protein, C terminal H4P35_03280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4P35_03280 PF00512 His Kinase A (phospho-acceptor) domain H4P35_03290 PF01970 Tripartite tricarboxylate transporter TctA family H4P35_03295 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H4P35_03300 PF03466 LysR substrate binding domain H4P35_03300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_03305 PF02525 Flavodoxin-like fold H4P35_03310 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase H4P35_03310 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase H4P35_03320 PF01970 Tripartite tricarboxylate transporter TctA family H4P35_03350 PF01790 Prolipoprotein diacylglyceryl transferase H4P35_03355 PF00920 Dehydratase family H4P35_03360 PF00034 Cytochrome c H4P35_03365 PF01625 Peptide methionine sulfoxide reductase H4P35_03370 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H4P35_03375 PF01037 Lrp/AsnC ligand binding domain H4P35_03435 PF07687 Peptidase dimerisation domain H4P35_03435 PF01546 Peptidase family M20/M25/M40 H4P35_03440 PF01979 Amidohydrolase family H4P35_03445 PF00005 ABC transporter H4P35_03445 PF16326 ABC transporter C-terminal domain H4P35_03445 PF12848 ABC transporter H4P35_03455 PF02381 MraZ protein, putative antitoxin-like H4P35_03460 PF01795 MraW methylase family H4P35_03465 PF04999 Cell division protein FtsL H4P35_03470 PF03717 Penicillin-binding Protein dimerisation domain H4P35_03470 PF00905 Penicillin binding protein transpeptidase domain H4P35_03475 PF02875 Mur ligase family, glutamate ligase domain H4P35_03475 PF08245 Mur ligase middle domain H4P35_03480 PF00953 Glycosyl transferase family 4 H4P35_03485 PF02875 Mur ligase family, glutamate ligase domain H4P35_03485 PF08245 Mur ligase middle domain H4P35_03490 PF01098 Cell cycle protein H4P35_03495 PF04101 Glycosyltransferase family 28 C-terminal domain H4P35_03495 PF03033 Glycosyltransferase family 28 N-terminal domain H4P35_03500 PF01225 Mur ligase family, catalytic domain H4P35_03500 PF02875 Mur ligase family, glutamate ligase domain H4P35_03500 PF08245 Mur ligase middle domain H4P35_03505 PF01820 D-ala D-ala ligase N-terminus H4P35_03505 PF07478 D-ala D-ala ligase C-terminus H4P35_03510 PF03799 Cell division protein FtsQ H4P35_03510 PF08478 POTRA domain, FtsQ-type H4P35_03515 PF02491 SHS2 domain inserted in FTSA H4P35_03520 PF12327 FtsZ family, C-terminal domain H4P35_03520 PF00091 Tubulin/FtsZ family, GTPase domain H4P35_03525 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase H4P35_03535 PF01476 LysM domain H4P35_03535 PF08525 Opacity-associated protein A N-terminal motif H4P35_03535 PF01551 Peptidase family M23 H4P35_03540 PF02810 SEC-C motif H4P35_03540 PF07517 SecA DEAD-like domain H4P35_03540 PF07516 SecA Wing and Scaffold domain H4P35_03540 PF01043 SecA preprotein cross-linking domain H4P35_03550 PF00392 Bacterial regulatory proteins, gntR family H4P35_03550 PF07729 FCD domain H4P35_03555 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_03560 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain H4P35_03560 PF00205 Thiamine pyrophosphate enzyme, central domain H4P35_03560 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain H4P35_03565 PF00106 short chain dehydrogenase H4P35_03570 PF01037 Lrp/AsnC ligand binding domain H4P35_03580 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP H4P35_03585 PF00571 CBS domain H4P35_03585 PF03448 MgtE intracellular N domain H4P35_03585 PF01769 Divalent cation transporter H4P35_03590 PF03061 Thioesterase superfamily H4P35_03595 PF03601 Conserved hypothetical protein 698 H4P35_03600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_03600 PF03466 LysR substrate binding domain H4P35_03605 PF01546 Peptidase family M20/M25/M40 H4P35_03605 PF07687 Peptidase dimerisation domain H4P35_03610 PF13193 AMP-binding enzyme C-terminal domain H4P35_03610 PF00501 AMP-binding enzyme H4P35_03615 PF00459 Inositol monophosphatase family H4P35_03620 PF01266 FAD dependent oxidoreductase H4P35_03620 PF05430 S-adenosyl-L-methionine-dependent methyltransferase H4P35_03625 PF13802 Galactose mutarotase-like H4P35_03625 PF01055 Glycosyl hydrolases family 31 H4P35_03630 PF09383 NIL domain H4P35_03630 PF00005 ABC transporter H4P35_03635 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_03640 PF03180 NLPA lipoprotein H4P35_03650 PF03797 Autotransporter beta-domain H4P35_03650 PF12951 Passenger-associated-transport-repeat H4P35_03650 PF00082 Subtilase family H4P35_03655 PF01734 Patatin-like phospholipase H4P35_03675 PF01475 Ferric uptake regulator family H4P35_03685 PF03692 Putative zinc- or iron-chelating domain H4P35_03690 PF03352 Methyladenine glycosylase H4P35_03695 PF00884 Sulfatase H4P35_03700 PF05170 AsmA family H4P35_03705 PF00990 Diguanylate cyclase, GGDEF domain H4P35_03710 PF00440 Bacterial regulatory proteins, tetR family H4P35_03730 PF00589 Phage integrase family H4P35_03735 PF00872 Transposase, Mutator family H4P35_03740 PF12102 Domain of unknown function (DUF3578) H4P35_03740 PF07728 AAA domain (dynein-related subfamily) H4P35_03775 PF02086 D12 class N6 adenine-specific DNA methyltransferase H4P35_03790 PF03707 Bacterial signalling protein N terminal repeat H4P35_03790 PF00990 Diguanylate cyclase, GGDEF domain H4P35_03790 PF00563 EAL domain H4P35_03795 PF00149 Calcineurin-like phosphoesterase H4P35_03795 PF02872 5'-nucleotidase, C-terminal domain H4P35_03805 PF04972 BON domain H4P35_03805 PF00691 OmpA family H4P35_03810 PF01329 Pterin 4 alpha carbinolamine dehydratase H4P35_03825 PF01494 FAD binding domain H4P35_03835 PF00483 Nucleotidyl transferase H4P35_03840 PF01636 Phosphotransferase enzyme family H4P35_03845 PF04453 LPS transport system D H4P35_03850 PF00639 PPIC-type PPIASE domain H4P35_03850 PF09312 SurA N-terminal domain H4P35_03855 PF00398 Ribosomal RNA adenine dimethylase H4P35_03860 PF01548 Transposase H4P35_03860 PF02371 Transposase IS116/IS110/IS902 family H4P35_03865 PF02595 Glycerate kinase family H4P35_03870 PF02887 Pyruvate kinase, alpha/beta domain H4P35_03870 PF00224 Pyruvate kinase, barrel domain H4P35_03875 PF07670 Nucleoside recognition H4P35_03885 PF01327 Polypeptide deformylase H4P35_03890 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H4P35_03895 PF00266 Aminotransferase class-V H4P35_03905 PF01553 Acyltransferase H4P35_03915 PF05746 DALR anticodon binding domain H4P35_03915 PF02092 Glycyl-tRNA synthetase beta subunit H4P35_03920 PF02091 Glycyl-tRNA synthetase alpha subunit H4P35_03925 PF00378 Enoyl-CoA hydratase/isomerase H4P35_03935 PF02627 Carboxymuconolactone decarboxylase family H4P35_03940 PF02515 CoA-transferase family III H4P35_03945 PF01575 MaoC like domain H4P35_03950 PF00106 short chain dehydrogenase H4P35_03960 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_03970 PF01070 FMN-dependent dehydrogenase H4P35_03975 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_03980 PF13193 AMP-binding enzyme C-terminal domain H4P35_03980 PF00501 AMP-binding enzyme H4P35_03995 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H4P35_03995 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H4P35_03995 PF02770 Acyl-CoA dehydrogenase, middle domain H4P35_04000 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H4P35_04000 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H4P35_04005 PF00378 Enoyl-CoA hydratase/isomerase H4P35_04010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_04010 PF03466 LysR substrate binding domain H4P35_04020 PF02515 CoA-transferase family III H4P35_04025 PF03328 HpcH/HpaI aldolase/citrate lyase family H4P35_04030 PF00294 pfkB family carbohydrate kinase H4P35_04035 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) H4P35_04040 PF12627 Probable RNA and SrmB- binding site of polymerase A H4P35_04040 PF01743 Poly A polymerase head domain H4P35_04040 PF12626 Polymerase A arginine-rich C-terminus H4P35_04050 PF00308 Bacterial dnaA protein H4P35_04055 PF00586 AIR synthase related protein, N-terminal domain H4P35_04055 PF02769 AIR synthase related protein, C-terminal domain H4P35_04065 PF01119 DNA mismatch repair protein, C-terminal domain H4P35_04065 PF08676 MutL C terminal dimerisation domain H4P35_04070 PF09335 SNARE associated Golgi protein H4P35_04075 PF11741 AMIN domain H4P35_04075 PF01520 N-acetylmuramoyl-L-alanine amidase H4P35_04080 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE H4P35_04085 PF00206 Lyase H4P35_04085 PF10415 Fumarase C C-terminus H4P35_04095 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_04100 PF03466 LysR substrate binding domain H4P35_04100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_04110 PF13520 Amino acid permease H4P35_04115 PF02515 CoA-transferase family III H4P35_04120 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_04125 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H4P35_04125 PF02770 Acyl-CoA dehydrogenase, middle domain H4P35_04125 PF18158 Adaptive response protein AidB N-terminal domain H4P35_04130 PF03466 LysR substrate binding domain H4P35_04130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_04135 PF00551 Formyl transferase H4P35_04140 PF01266 FAD dependent oxidoreductase H4P35_04145 PF01613 Flavin reductase like domain H4P35_04150 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region H4P35_04150 PF01243 Pyridoxamine 5'-phosphate oxidase H4P35_04165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H4P35_04170 PF12704 MacB-like periplasmic core domain H4P35_04170 PF02687 FtsX-like permease family H4P35_04170 PF00005 ABC transporter H4P35_04175 PF02321 Outer membrane efflux protein H4P35_04180 PF00899 ThiF family H4P35_04185 PF00355 Rieske [2Fe-2S] domain H4P35_04190 PF13577 SnoaL-like domain H4P35_04195 PF00848 Ring hydroxylating alpha subunit (catalytic domain) H4P35_04195 PF00355 Rieske [2Fe-2S] domain H4P35_04200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_04200 PF03466 LysR substrate binding domain H4P35_04210 PF00425 chorismate binding enzyme H4P35_04210 PF04715 Anthranilate synthase component I, N terminal region H4P35_04215 PF17760 UvrA interaction domain H4P35_04215 PF17755 UvrA DNA-binding domain H4P35_04215 PF00005 ABC transporter H4P35_04225 PF01081 KDPG and KHG aldolase H4P35_04230 PF00294 pfkB family carbohydrate kinase H4P35_04235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_04235 PF03466 LysR substrate binding domain H4P35_04240 PF00535 Glycosyl transferase family 2 H4P35_04245 PF00005 ABC transporter H4P35_04250 PF12399 Branched-chain amino acid ATP-binding cassette transporter H4P35_04250 PF00005 ABC transporter H4P35_04270 PF04199 Putative cyclase H4P35_04285 PF00501 AMP-binding enzyme H4P35_04285 PF13193 AMP-binding enzyme C-terminal domain H4P35_04290 PF00866 Ring hydroxylating beta subunit H4P35_04295 PF00848 Ring hydroxylating alpha subunit (catalytic domain) H4P35_04295 PF00355 Rieske [2Fe-2S] domain H4P35_04300 PF00111 2Fe-2S iron-sulfur cluster binding domain H4P35_04320 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H4P35_04325 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_04330 PF12911 N-terminal TM domain of oligopeptide transport permease C H4P35_04330 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_04335 PF00005 ABC transporter H4P35_04335 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H4P35_04340 PF00005 ABC transporter H4P35_04340 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H4P35_04355 PF00005 ABC transporter H4P35_04355 PF12848 ABC transporter H4P35_04370 PF03776 Septum formation topological specificity factor MinE H4P35_04375 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain H4P35_04380 PF05209 Septum formation inhibitor MinC, N-terminal domain H4P35_04380 PF03775 Septum formation inhibitor MinC, C-terminal domain H4P35_04385 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain H4P35_04385 PF00749 tRNA synthetases class I (E and Q), catalytic domain H4P35_04390 PF01654 Cytochrome bd terminal oxidase subunit I H4P35_04395 PF02322 Cytochrome bd terminal oxidase subunit II H4P35_04400 PF00270 DEAD/DEAH box helicase H4P35_04400 PF00271 Helicase conserved C-terminal domain H4P35_04400 PF00570 HRDC domain H4P35_04400 PF16124 RecQ zinc-binding H4P35_04400 PF09382 RQC domain H4P35_04410 PF00072 Response regulator receiver domain H4P35_04410 PF00486 Transcriptional regulatory protein, C terminal H4P35_04415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4P35_04415 PF00512 His Kinase A (phospho-acceptor) domain H4P35_04420 PF05496 Holliday junction DNA helicase RuvB P-loop domain H4P35_04420 PF05491 RuvB C-terminal winged helix domain H4P35_04420 PF17864 RuvB AAA lid domain H4P35_04425 PF00291 Pyridoxal-phosphate dependent enzyme H4P35_04430 PF08338 Domain of unknown function (DUF1731) H4P35_04430 PF01370 NAD dependent epimerase/dehydratase family H4P35_04435 PF01330 RuvA N terminal domain H4P35_04435 PF07499 RuvA, C-terminal domain H4P35_04440 PF02075 Crossover junction endodeoxyribonuclease RuvC H4P35_04445 PF01808 AICARFT/IMPCHase bienzyme H4P35_04445 PF02142 MGS-like domain H4P35_04450 PF02954 Bacterial regulatory protein, Fis family H4P35_04455 PF01207 Dihydrouridine synthase (Dus) H4P35_04460 PF01494 FAD binding domain H4P35_04470 PF00557 Metallopeptidase family M24 H4P35_04470 PF05195 Aminopeptidase P, N-terminal domain H4P35_04485 PF00690 Cation transporter/ATPase, N-terminus H4P35_04485 PF00689 Cation transporting ATPase, C-terminus H4P35_04490 PF13609 Gram-negative porin H4P35_04500 PF00483 Nucleotidyl transferase H4P35_04505 PF13181 Tetratricopeptide repeat H4P35_04505 PF01435 Peptidase family M48 H4P35_04510 PF00561 alpha/beta hydrolase fold H4P35_04525 PF01063 Amino-transferase class IV H4P35_04540 PF00270 DEAD/DEAH box helicase H4P35_04540 PF00271 Helicase conserved C-terminal domain H4P35_04555 PF00994 Probable molybdopterin binding domain H4P35_04555 PF18146 Damage-inducible protein CinA KH domain H4P35_04555 PF02464 Competence-damaged protein H4P35_04560 PF01614 Bacterial transcriptional regulator H4P35_04560 PF09339 IclR helix-turn-helix domain H4P35_04565 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_04575 PF01180 Dihydroorotate dehydrogenase H4P35_04580 PF04376 Arginine-tRNA-protein transferase, N terminus H4P35_04580 PF04377 Arginine-tRNA-protein transferase, C terminus H4P35_04585 PF03588 Leucyl/phenylalanyl-tRNA protein transferase H4P35_04590 PF00293 NUDIX domain H4P35_04590 PF09297 NADH pyrophosphatase zinc ribbon domain H4P35_04595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_04595 PF03466 LysR substrate binding domain H4P35_04635 PF01565 FAD binding domain H4P35_04635 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain H4P35_04640 PF01548 Transposase H4P35_04640 PF02371 Transposase IS116/IS110/IS902 family H4P35_04645 PF01113 Dihydrodipicolinate reductase, N-terminus H4P35_04645 PF05173 Dihydrodipicolinate reductase, C-terminus H4P35_04650 PF04355 SmpA / OmlA family H4P35_04655 PF01475 Ferric uptake regulator family H4P35_04660 PF02463 RecF/RecN/SMC N terminal domain H4P35_04665 PF01513 ATP-NAD kinase H4P35_04670 PF01628 HrcA protein C terminal domain H4P35_04670 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding H4P35_04675 PF00762 Ferrochelatase H4P35_04685 PF01025 GrpE H4P35_04695 PF00012 Hsp70 protein H4P35_04700 PF01556 DnaJ C terminal domain H4P35_04700 PF00684 DnaJ central domain H4P35_04700 PF00226 DnaJ domain H4P35_04715 PF00675 Insulinase (Peptidase family M16) H4P35_04715 PF05193 Peptidase M16 inactive domain H4P35_04720 PF13302 Acetyltransferase (GNAT) domain H4P35_04740 PF00004 ATPase family associated with various cellular activities (AAA) H4P35_04740 PF17862 AAA+ lid domain H4P35_04740 PF01434 Peptidase family M41 H4P35_04745 PF00034 Cytochrome c H4P35_04760 PF00180 Isocitrate/isopropylmalate dehydrogenase H4P35_04770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H4P35_04770 PF02203 Tar ligand binding domain homologue H4P35_04770 PF00672 HAMP domain H4P35_04775 PF00701 Dihydrodipicolinate synthetase family H4P35_04790 PF00072 Response regulator receiver domain H4P35_04790 PF00486 Transcriptional regulatory protein, C terminal H4P35_04795 PF00512 His Kinase A (phospho-acceptor) domain H4P35_04795 PF02702 Osmosensitive K+ channel His kinase sensor domain H4P35_04795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4P35_04795 PF13492 GAF domain H4P35_04795 PF13493 Domain of unknown function (DUF4118) H4P35_04800 PF02669 K+-transporting ATPase, c chain H4P35_04810 PF03814 Potassium-transporting ATPase A subunit H4P35_04825 PF00474 Sodium:solute symporter family H4P35_04840 PF00893 Small Multidrug Resistance protein H4P35_04845 PF00488 MutS domain V H4P35_04845 PF01713 Smr domain H4P35_04850 PF07992 Pyridine nucleotide-disulphide oxidoreductase H4P35_04855 PF09397 Ftsk gamma domain H4P35_04855 PF17854 FtsK alpha domain H4P35_04855 PF13491 4TM region of DNA translocase FtsK/SpoIIIE H4P35_04855 PF01580 FtsK/SpoIIIE family H4P35_04860 PF03548 Outer membrane lipoprotein carrier protein LolA H4P35_04865 PF01042 Endoribonuclease L-PSP H4P35_04870 PF07969 Amidohydrolase family H4P35_04875 PF00571 CBS domain H4P35_04875 PF01380 SIS domain H4P35_04880 PF00005 ABC transporter H4P35_04880 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H4P35_04885 PF00005 ABC transporter H4P35_04885 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H4P35_04890 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_04890 PF12911 N-terminal TM domain of oligopeptide transport permease C H4P35_04895 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_04900 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H4P35_04910 PF00795 Carbon-nitrogen hydrolase H4P35_04915 PF00004 ATPase family associated with various cellular activities (AAA) H4P35_04915 PF12002 MgsA AAA+ ATPase C terminal H4P35_04915 PF16193 AAA C-terminal domain H4P35_04920 PF02403 Seryl-tRNA synthetase N-terminal domain H4P35_04920 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) H4P35_04945 PF01979 Amidohydrolase family H4P35_04955 PF13378 Enolase C-terminal domain-like H4P35_04955 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain H4P35_04960 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_04970 PF00083 Sugar (and other) transporter H4P35_04970 PF07690 Major Facilitator Superfamily H4P35_04975 PF00795 Carbon-nitrogen hydrolase H4P35_04980 PF01613 Flavin reductase like domain H4P35_04985 PF02203 Tar ligand binding domain homologue H4P35_04985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H4P35_04985 PF00672 HAMP domain H4P35_04995 PF02254 TrkA-N domain H4P35_04995 PF00999 Sodium/hydrogen exchanger family H4P35_05000 PF00106 short chain dehydrogenase H4P35_05005 PF03883 Peroxide stress protein YaaA H4P35_05010 PF12805 FUSC-like inner membrane protein yccS H4P35_05015 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain H4P35_05015 PF00205 Thiamine pyrophosphate enzyme, central domain H4P35_05015 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain H4P35_05020 PF10369 Small subunit of acetolactate synthase H4P35_05025 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain H4P35_05025 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain H4P35_05030 PF01066 CDP-alcohol phosphatidyltransferase H4P35_05040 PF00312 Ribosomal protein S15 H4P35_05045 PF00013 KH domain H4P35_05045 PF01138 3' exoribonuclease family, domain 1 H4P35_05045 PF03725 3' exoribonuclease family, domain 2 H4P35_05045 PF00575 S1 RNA binding domain H4P35_05045 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain H4P35_05055 PF13291 ACT domain H4P35_05055 PF00291 Pyridoxal-phosphate dependent enzyme H4P35_05065 PF01970 Tripartite tricarboxylate transporter TctA family H4P35_05080 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE H4P35_05100 PF05947 Type VI secretion system, TssF H4P35_05110 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath H4P35_05120 PF07724 AAA domain (Cdc48 subfamily) H4P35_05120 PF17871 AAA lid domain H4P35_05120 PF00004 ATPase family associated with various cellular activities (AAA) H4P35_05120 PF10431 C-terminal, D2-small domain, of ClpB protein H4P35_05125 PF00158 Sigma-54 interaction domain H4P35_05125 PF02954 Bacterial regulatory protein, Fis family H4P35_05140 PF06744 Type VI secretion protein IcmF C-terminal H4P35_05140 PF14331 ImcF-related N-terminal domain H4P35_05140 PF06761 Intracellular multiplication and human macrophage-killing H4P35_05155 PF02515 CoA-transferase family III H4P35_05160 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_05165 PF00682 HMGL-like H4P35_05180 PF08240 Alcohol dehydrogenase GroES-like domain H4P35_05180 PF00698 Acyl transferase domain H4P35_05180 PF16197 Ketoacyl-synthetase C-terminal extension H4P35_05180 PF14765 Polyketide synthase dehydratase H4P35_05180 PF00550 Phosphopantetheine attachment site H4P35_05180 PF08659 KR domain H4P35_05180 PF02801 Beta-ketoacyl synthase, C-terminal domain H4P35_05180 PF00109 Beta-ketoacyl synthase, N-terminal domain H4P35_05185 PF00121 Triosephosphate isomerase H4P35_05190 PF03840 Preprotein translocase SecG subunit H4P35_05195 PF03466 LysR substrate binding domain H4P35_05195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_05200 PF07063 Domain of unknown function (DUF1338) H4P35_05205 PF01070 FMN-dependent dehydrogenase H4P35_05210 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_05255 PF00795 Carbon-nitrogen hydrolase H4P35_05260 PF07969 Amidohydrolase family H4P35_05265 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H4P35_05265 PF00005 ABC transporter H4P35_05270 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H4P35_05270 PF00005 ABC transporter H4P35_05275 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_05280 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_05285 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H4P35_05290 PF07364 Metallopeptidase family M81 H4P35_05290 PF07171 MlrC C-terminus H4P35_05295 PF01042 Endoribonuclease L-PSP H4P35_05300 PF01266 FAD dependent oxidoreductase H4P35_05310 PF01494 FAD binding domain H4P35_05320 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_05335 PF03466 LysR substrate binding domain H4P35_05335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_05365 PF01804 Penicillin amidase H4P35_05385 PF06719 AraC-type transcriptional regulator N-terminus H4P35_05385 PF12833 Helix-turn-helix domain H4P35_05390 PF00106 short chain dehydrogenase H4P35_05400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4P35_05400 PF00512 His Kinase A (phospho-acceptor) domain H4P35_05400 PF08521 Two-component sensor kinase N-terminal H4P35_05405 PF00072 Response regulator receiver domain H4P35_05405 PF00486 Transcriptional regulatory protein, C terminal H4P35_05410 PF03600 Citrate transporter H4P35_05415 PF00106 short chain dehydrogenase H4P35_05425 PF00884 Sulfatase H4P35_05430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_05430 PF03466 LysR substrate binding domain H4P35_05450 PF00313 'Cold-shock' DNA-binding domain H4P35_05460 PF00158 Sigma-54 interaction domain H4P35_05460 PF02954 Bacterial regulatory protein, Fis family H4P35_05465 PF04405 Domain of Unknown function (DUF542) H4P35_05465 PF01814 Hemerythrin HHE cation binding domain H4P35_05475 PF05661 Protein of unknown function (DUF808) H4P35_05480 PF02321 Outer membrane efflux protein H4P35_05485 PF00873 AcrB/AcrD/AcrF family H4P35_05490 PF13533 Biotin-lipoyl like H4P35_05500 PF02028 BCCT, betaine/carnitine/choline family transporter H4P35_05505 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H4P35_05510 PF00873 AcrB/AcrD/AcrF family H4P35_05515 PF02321 Outer membrane efflux protein H4P35_05525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_05525 PF03466 LysR substrate binding domain H4P35_05530 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H4P35_05540 PF00781 Diacylglycerol kinase catalytic domain H4P35_05545 PF00149 Calcineurin-like phosphoesterase H4P35_05555 PF02153 Prephenate dehydrogenase H4P35_05570 PF13609 Gram-negative porin H4P35_05575 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 H4P35_05580 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit H4P35_05585 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit H4P35_05590 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit H4P35_05600 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit H4P35_05600 PF10531 SLBB domain H4P35_05600 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region H4P35_05605 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal H4P35_05605 PF00384 Molybdopterin oxidoreductase H4P35_05605 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region H4P35_05610 PF00146 NADH dehydrogenase H4P35_05615 PF12838 4Fe-4S dicluster domain H4P35_05620 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 H4P35_05625 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L H4P35_05630 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus H4P35_05630 PF00361 Proton-conducting membrane transporter H4P35_05635 PF00361 Proton-conducting membrane transporter H4P35_05635 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus H4P35_05640 PF00361 Proton-conducting membrane transporter H4P35_05650 PF07715 TonB-dependent Receptor Plug Domain H4P35_05650 PF00593 TonB dependent receptor H4P35_05660 PF17757 UvrB interaction domain H4P35_05660 PF00271 Helicase conserved C-terminal domain H4P35_05660 PF00270 DEAD/DEAH box helicase H4P35_05660 PF02559 CarD-like/TRCF domain H4P35_05660 PF03461 TRCF domain H4P35_05665 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase H4P35_05670 PF02542 YgbB family H4P35_05680 PF02627 Carboxymuconolactone decarboxylase family H4P35_05685 PF00578 AhpC/TSA family H4P35_05690 PF00672 HAMP domain H4P35_05690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4P35_05690 PF00512 His Kinase A (phospho-acceptor) domain H4P35_05695 PF00072 Response regulator receiver domain H4P35_05695 PF00486 Transcriptional regulatory protein, C terminal H4P35_05700 PF00814 Glycoprotease family H4P35_05705 PF03167 Uracil DNA glycosylase superfamily H4P35_05710 PF07690 Major Facilitator Superfamily H4P35_05715 PF06470 SMC proteins Flexible Hinge Domain H4P35_05715 PF02463 RecF/RecN/SMC N terminal domain H4P35_05725 PF03119 NAD-dependent DNA ligase C4 zinc finger domain H4P35_05725 PF12826 Helix-hairpin-helix motif H4P35_05725 PF00533 BRCA1 C Terminus (BRCT) domain H4P35_05725 PF01653 NAD-dependent DNA ligase adenylation domain H4P35_05725 PF03120 NAD-dependent DNA ligase OB-fold domain H4P35_05740 PF04279 Intracellular septation protein A H4P35_05745 PF01641 SelR domain H4P35_05750 PF00005 ABC transporter H4P35_05755 PF02361 Cobalt transport protein H4P35_05760 PF02632 BioY family H4P35_05775 PF00005 ABC transporter H4P35_05775 PF12399 Branched-chain amino acid ATP-binding cassette transporter H4P35_05780 PF00005 ABC transporter H4P35_05785 PF04185 Phosphoesterase family H4P35_05785 PF05506 Domain of unknown function (DUF756) H4P35_05790 PF01063 Amino-transferase class IV H4P35_05805 PF02653 Branched-chain amino acid transport system / permease component H4P35_05815 PF00005 ABC transporter H4P35_05820 PF12399 Branched-chain amino acid ATP-binding cassette transporter H4P35_05820 PF00005 ABC transporter H4P35_05825 PF00730 HhH-GPD superfamily base excision DNA repair protein H4P35_05825 PF00633 Helix-hairpin-helix motif H4P35_05825 PF10576 Iron-sulfur binding domain of endonuclease III H4P35_05830 PF04060 Putative Fe-S cluster H4P35_05840 PF00175 Oxidoreductase NAD-binding domain H4P35_05840 PF00970 Oxidoreductase FAD-binding domain H4P35_05845 PF11953 Domain of unknown function (DUF3470) H4P35_05845 PF00037 4Fe-4S binding domain H4P35_05850 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family H4P35_05850 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain H4P35_05855 PF01042 Endoribonuclease L-PSP H4P35_05865 PF06167 Glucose-regulated metallo-peptidase M90 H4P35_05870 PF13291 ACT domain H4P35_05870 PF02824 TGS domain H4P35_05870 PF04607 Region found in RelA / SpoT proteins H4P35_05875 PF07690 Major Facilitator Superfamily H4P35_05880 PF01546 Peptidase family M20/M25/M40 H4P35_05880 PF07687 Peptidase dimerisation domain H4P35_05885 PF00291 Pyridoxal-phosphate dependent enzyme H4P35_05890 PF00290 Tryptophan synthase alpha chain H4P35_05895 PF17848 Acetyl-coA carboxylase zinc finger domain H4P35_05895 PF01039 Carboxyl transferase domain H4P35_05900 PF09411 Lipid A 3-O-deacylase (PagL) H4P35_05905 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_05910 PF08666 SAF domain H4P35_05910 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus H4P35_05920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_05920 PF03466 LysR substrate binding domain H4P35_05925 PF10150 Ribonuclease E/G family H4P35_05925 PF00575 S1 RNA binding domain H4P35_05925 PF12111 Polyribonucleotide phosphorylase C terminal H4P35_05930 PF00849 RNA pseudouridylate synthase H4P35_05930 PF01479 S4 domain H4P35_05935 PF13419 Haloacid dehalogenase-like hydrolase H4P35_05940 PF00174 Oxidoreductase molybdopterin binding domain H4P35_05945 PF01794 Ferric reductase like transmembrane component H4P35_05950 PF01510 N-acetylmuramoyl-L-alanine amidase H4P35_05955 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases H4P35_05960 PF02545 Maf-like protein H4P35_05965 PF02620 Large ribosomal RNA subunit accumulation protein YceD H4P35_05970 PF01783 Ribosomal L32p protein family H4P35_05975 PF02504 Fatty acid synthesis protein H4P35_05980 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III H4P35_05980 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal H4P35_05985 PF00698 Acyl transferase domain H4P35_05995 PF00550 Phosphopantetheine attachment site H4P35_06000 PF02801 Beta-ketoacyl synthase, C-terminal domain H4P35_06000 PF00109 Beta-ketoacyl synthase, N-terminal domain H4P35_06010 PF04542 Sigma-70 region 2 H4P35_06010 PF08281 Sigma-70, region 4 H4P35_06025 PF13180 PDZ domain H4P35_06030 PF06421 GTP-binding protein LepA C-terminus H4P35_06030 PF03144 Elongation factor Tu domain 2 H4P35_06030 PF00009 Elongation factor Tu GTP binding domain H4P35_06030 PF00679 Elongation factor G C-terminus H4P35_06035 PF10502 Signal peptidase, peptidase S26 H4P35_06040 PF14622 Ribonuclease-III-like H4P35_06040 PF00035 Double-stranded RNA binding motif H4P35_06045 PF01926 50S ribosome-binding GTPase H4P35_06045 PF07650 KH domain H4P35_06050 PF02565 Recombination protein O C terminal H4P35_06050 PF11967 Recombination protein O N terminal H4P35_06070 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_06085 PF01027 Inhibitor of apoptosis-promoting Bax1 H4P35_06100 PF00883 Cytosol aminopeptidase family, catalytic domain H4P35_06100 PF02789 Cytosol aminopeptidase family, N-terminal domain H4P35_06110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_06120 PF00171 Aldehyde dehydrogenase family H4P35_06125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_06125 PF03466 LysR substrate binding domain H4P35_06135 PF00877 NlpC/P60 family H4P35_06140 PF16177 Acetyl-coenzyme A synthetase N-terminus H4P35_06140 PF00501 AMP-binding enzyme H4P35_06140 PF13193 AMP-binding enzyme C-terminal domain H4P35_06145 PF03928 Haem-degrading H4P35_06155 PF16177 Acetyl-coenzyme A synthetase N-terminus H4P35_06155 PF00501 AMP-binding enzyme H4P35_06155 PF13193 AMP-binding enzyme C-terminal domain H4P35_06160 PF00892 EamA-like transporter family H4P35_06165 PF01212 Beta-eliminating lyase H4P35_06180 PF16363 GDP-mannose 4,6 dehydratase H4P35_06195 PF01144 Coenzyme A transferase H4P35_06200 PF01144 Coenzyme A transferase H4P35_06205 PF13673 Acetyltransferase (GNAT) domain H4P35_06215 PF01112 Asparaginase H4P35_06220 PF00005 ABC transporter H4P35_06220 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H4P35_06225 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H4P35_06230 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_06235 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_06235 PF12911 N-terminal TM domain of oligopeptide transport permease C H4P35_06240 PF03576 Peptidase family S58 H4P35_06250 PF01321 Creatinase/Prolidase N-terminal domain H4P35_06250 PF00557 Metallopeptidase family M24 H4P35_06260 PF06418 CTP synthase N-terminus H4P35_06260 PF00117 Glutamine amidotransferase class-I H4P35_06270 PF00113 Enolase, C-terminal TIM barrel domain H4P35_06270 PF03952 Enolase, N-terminal domain H4P35_06275 PF04977 Septum formation initiator H4P35_06285 PF01430 Hsp33 protein H4P35_06295 PF00501 AMP-binding enzyme H4P35_06295 PF13193 AMP-binding enzyme C-terminal domain H4P35_06320 PF02926 THUMP domain H4P35_06320 PF01170 Putative RNA methylase family UPF0020 H4P35_06325 PF03653 Uncharacterised protein family (UPF0093) H4P35_06330 PF03972 MmgE/PrpD family H4P35_06335 PF00285 Citrate synthase, C-terminal domain H4P35_06345 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain H4P35_06345 PF00056 lactate/malate dehydrogenase, NAD binding domain H4P35_06350 PF07702 UTRA domain H4P35_06350 PF00392 Bacterial regulatory proteins, gntR family H4P35_06355 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit H4P35_06360 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit H4P35_06365 PF00890 FAD binding domain H4P35_06365 PF02910 Fumarate reductase flavoprotein C-term H4P35_06370 PF13085 2Fe-2S iron-sulfur cluster binding domain H4P35_06375 PF03937 Flavinator of succinate dehydrogenase H4P35_06380 PF00285 Citrate synthase, C-terminal domain H4P35_06385 PF00419 Fimbrial protein H4P35_06390 PF00577 Outer membrane usher protein H4P35_06390 PF13953 PapC C-terminal domain H4P35_06390 PF13954 PapC N-terminal domain H4P35_06395 PF02753 Pili assembly chaperone PapD, C-terminal domain H4P35_06395 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain H4P35_06400 PF16970 Type-1 fimbrial protein, A H4P35_06415 PF00390 Malic enzyme, N-terminal domain H4P35_06415 PF03949 Malic enzyme, NAD binding domain H4P35_06415 PF01515 Phosphate acetyl/butaryl transferase H4P35_06420 PF17831 Pyruvate dehydrogenase E1 component middle domain H4P35_06420 PF00456 Transketolase, thiamine diphosphate binding domain H4P35_06425 PF03169 OPT oligopeptide transporter protein H4P35_06430 PF01546 Peptidase family M20/M25/M40 H4P35_06430 PF07687 Peptidase dimerisation domain H4P35_06445 PF00291 Pyridoxal-phosphate dependent enzyme H4P35_06450 PF01037 Lrp/AsnC ligand binding domain H4P35_06450 PF13404 AsnC-type helix-turn-helix domain H4P35_06455 PF16078 2-oxoglutarate dehydrogenase N-terminus H4P35_06455 PF00676 Dehydrogenase E1 component H4P35_06455 PF16870 2-oxoglutarate dehydrogenase C-terminal H4P35_06455 PF02779 Transketolase, pyrimidine binding domain H4P35_06460 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) H4P35_06460 PF00364 Biotin-requiring enzyme H4P35_06460 PF02817 e3 binding domain H4P35_06465 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H4P35_06465 PF07992 Pyridine nucleotide-disulphide oxidoreductase H4P35_06470 PF03969 AFG1-like ATPase H4P35_06475 PF04542 Sigma-70 region 2 H4P35_06475 PF08281 Sigma-70, region 4 H4P35_06480 PF16220 Domain of unknown function (DUF4880) H4P35_06480 PF04773 FecR protein H4P35_06485 PF07715 TonB-dependent Receptor Plug Domain H4P35_06485 PF00593 TonB dependent receptor H4P35_06505 PF00579 tRNA synthetases class I (W and Y) H4P35_06510 PF09371 Tex-like protein N-terminal domain H4P35_06510 PF16921 Tex protein YqgF-like domain H4P35_06510 PF00575 S1 RNA binding domain H4P35_06510 PF17674 HHH domain H4P35_06515 PF13307 Helicase C-terminal domain H4P35_06515 PF04851 Type III restriction enzyme, res subunit H4P35_06520 PF13525 Outer membrane lipoprotein H4P35_06525 PF00849 RNA pseudouridylate synthase H4P35_06525 PF01479 S4 domain H4P35_06530 PF02578 Multi-copper polyphenol oxidoreductase laccase H4P35_06535 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus H4P35_06540 PF00106 short chain dehydrogenase H4P35_06545 PF07879 PHB/PHA accumulation regulator DNA-binding domain H4P35_06545 PF05233 PHB accumulation regulatory domain H4P35_06550 PF10634 Fe2+ transport protein H4P35_06560 PF03239 Iron permease FTR1 family H4P35_06570 PF02567 Phenazine biosynthesis-like protein H4P35_06575 PF04972 BON domain H4P35_06585 PF05532 CsbD-like H4P35_06590 PF02875 Mur ligase family, glutamate ligase domain H4P35_06590 PF08245 Mur ligase middle domain H4P35_06590 PF08443 RimK-like ATP-grasp domain H4P35_06595 PF08443 RimK-like ATP-grasp domain H4P35_06595 PF08245 Mur ligase middle domain H4P35_06595 PF02875 Mur ligase family, glutamate ligase domain H4P35_06600 PF00664 ABC transporter transmembrane region H4P35_06600 PF00005 ABC transporter H4P35_06615 PF04305 Protein of unknown function (DUF455) H4P35_06620 PF03475 3-alpha domain H4P35_06620 PF03473 MOSC domain H4P35_06625 PF13406 Transglycosylase SLT domain H4P35_06660 PF00589 Phage integrase family H4P35_06660 PF12167 Arm DNA-binding domain H4P35_06685 PF04381 Putative exonuclease, RdgC H4P35_06795 PF04860 Phage portal protein H4P35_06870 PF14464 Prokaryotic homologs of the JAB domain H4P35_06970 PF07690 Major Facilitator Superfamily H4P35_06975 PF13419 Haloacid dehalogenase-like hydrolase H4P35_06985 PF00691 OmpA family H4P35_06990 PF00521 DNA gyrase/topoisomerase IV, subunit A H4P35_06990 PF03989 DNA gyrase C-terminal domain, beta-propeller H4P35_06995 PF00266 Aminotransferase class-V H4P35_07000 PF01817 Chorismate mutase type II H4P35_07000 PF00800 Prephenate dehydratase H4P35_07000 PF01842 ACT domain H4P35_07005 PF00155 Aminotransferase class I and II H4P35_07015 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) H4P35_07020 PF02224 Cytidylate kinase H4P35_07025 PF00575 S1 RNA binding domain H4P35_07030 PF00216 Bacterial DNA-binding protein H4P35_07040 PF18073 Rubredoxin metal binding domain H4P35_07045 PF00294 pfkB family carbohydrate kinase H4P35_07050 PF01370 NAD dependent epimerase/dehydratase family H4P35_07060 PF00291 Pyridoxal-phosphate dependent enzyme H4P35_07065 PF13406 Transglycosylase SLT domain H4P35_07070 PF00850 Histone deacetylase domain H4P35_07075 PF01012 Electron transfer flavoprotein domain H4P35_07080 PF01012 Electron transfer flavoprotein domain H4P35_07080 PF00766 Electron transfer flavoprotein FAD-binding domain H4P35_07085 PF06826 Predicted Permease Membrane Region H4P35_07090 PF00155 Aminotransferase class I and II H4P35_07095 PF02080 TrkA-C domain H4P35_07095 PF06826 Predicted Permease Membrane Region H4P35_07100 PF10417 C-terminal domain of 1-Cys peroxiredoxin H4P35_07100 PF00578 AhpC/TSA family H4P35_07110 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_07115 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_07120 PF12857 TOBE-like domain H4P35_07120 PF00005 ABC transporter H4P35_07120 PF17850 CysA C-terminal regulatory domain H4P35_07125 PF01507 Phosphoadenosine phosphosulfate reductase family H4P35_07130 PF01507 Phosphoadenosine phosphosulfate reductase family H4P35_07135 PF00009 Elongation factor Tu GTP binding domain H4P35_07140 PF04055 Radical SAM superfamily H4P35_07155 PF01245 Ribosomal protein L19 H4P35_07160 PF00293 NUDIX domain H4P35_07165 PF03193 RsgA GTPase H4P35_07170 PF01435 Peptidase family M48 H4P35_07175 PF00929 Exonuclease H4P35_07180 PF03853 YjeF-related protein N-terminus H4P35_07185 PF08223 PaaX-like protein C-terminal domain H4P35_07185 PF07848 PaaX-like protein H4P35_07190 PF05138 Phenylacetic acid catabolic protein H4P35_07195 PF06243 Phenylacetic acid degradation B H4P35_07200 PF05138 Phenylacetic acid catabolic protein H4P35_07205 PF01883 Iron-sulfur cluster assembly protein H4P35_07210 PF00970 Oxidoreductase FAD-binding domain H4P35_07210 PF00111 2Fe-2S iron-sulfur cluster binding domain H4P35_07210 PF00175 Oxidoreductase NAD-binding domain H4P35_07215 PF00171 Aldehyde dehydrogenase family H4P35_07220 PF00378 Enoyl-CoA hydratase/isomerase H4P35_07225 PF03061 Thioesterase superfamily H4P35_07230 PF00501 AMP-binding enzyme H4P35_07230 PF14535 AMP-binding enzyme C-terminal domain H4P35_07235 PF01554 MatE H4P35_07245 PF01197 Ribosomal protein L31 H4P35_07250 PF03301 Tryptophan 2,3-dioxygenase H4P35_07255 PF04199 Putative cyclase H4P35_07260 PF04002 RadC-like JAB domain H4P35_07270 PF02401 LytB protein H4P35_07275 PF14497 Glutathione S-transferase, C-terminal domain H4P35_07275 PF02798 Glutathione S-transferase, N-terminal domain H4P35_07280 PF13180 PDZ domain H4P35_07285 PF00512 His Kinase A (phospho-acceptor) domain H4P35_07285 PF08521 Two-component sensor kinase N-terminal H4P35_07285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4P35_07290 PF00486 Transcriptional regulatory protein, C terminal H4P35_07290 PF00072 Response regulator receiver domain H4P35_07305 PF02492 CobW/HypB/UreG, nucleotide-binding domain H4P35_07305 PF07683 Cobalamin synthesis protein cobW C-terminal domain H4P35_07310 PF03466 LysR substrate binding domain H4P35_07310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_07325 PF04079 Segregation and condensation complex subunit ScpB H4P35_07330 PF00849 RNA pseudouridylate synthase H4P35_07330 PF01479 S4 domain H4P35_07335 PF17384 RimP C-terminal SH3 domain H4P35_07335 PF02576 RimP N-terminal domain H4P35_07340 PF13184 NusA-like KH domain H4P35_07340 PF08529 NusA N-terminal domain H4P35_07345 PF04760 Translation initiation factor IF-2, N-terminal region H4P35_07345 PF00009 Elongation factor Tu GTP binding domain H4P35_07345 PF08364 Bacterial translation initiation factor IF-2 associated region H4P35_07345 PF11987 Translation-initiation factor 2 H4P35_07350 PF02033 Ribosome-binding factor A H4P35_07355 PF16198 tRNA pseudouridylate synthase B C-terminal domain H4P35_07355 PF01509 TruB family pseudouridylate synthase (N terminal domain) H4P35_07360 PF03144 Elongation factor Tu domain 2 H4P35_07360 PF00009 Elongation factor Tu GTP binding domain H4P35_07360 PF00679 Elongation factor G C-terminus H4P35_07370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_07370 PF03466 LysR substrate binding domain H4P35_07375 PF03641 Possible lysine decarboxylase H4P35_07380 PF01367 5'-3' exonuclease, C-terminal SAM fold H4P35_07380 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain H4P35_07380 PF00476 DNA polymerase family A H4P35_07380 PF01612 3'-5' exonuclease H4P35_07385 PF02535 ZIP Zinc transporter H4P35_07390 PF01738 Dienelactone hydrolase family H4P35_07395 PF02690 Na+/Pi-cotransporter H4P35_07400 PF03315 Serine dehydratase beta chain H4P35_07400 PF03313 Serine dehydratase alpha chain H4P35_07405 PF01435 Peptidase family M48 H4P35_07415 PF00581 Rhodanese-like domain H4P35_07425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_07425 PF03466 LysR substrate binding domain H4P35_07430 PF00005 ABC transporter H4P35_07430 PF08402 TOBE domain H4P35_07440 PF13419 Haloacid dehalogenase-like hydrolase H4P35_07450 PF07992 Pyridine nucleotide-disulphide oxidoreductase H4P35_07465 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_07475 PF02609 Exonuclease VII small subunit H4P35_07480 PF00348 Polyprenyl synthetase H4P35_07485 PF02779 Transketolase, pyrimidine binding domain H4P35_07485 PF13292 1-deoxy-D-xylulose-5-phosphate synthase H4P35_07485 PF02780 Transketolase, C-terminal domain H4P35_07490 PF02649 Type I GTP cyclohydrolase folE2 H4P35_07495 PF05675 Protein of unknown function (DUF817) H4P35_07500 PF01250 Ribosomal protein S6 H4P35_07510 PF01084 Ribosomal protein S18 H4P35_07515 PF01281 Ribosomal protein L9, N-terminal domain H4P35_07515 PF03948 Ribosomal protein L9, C-terminal domain H4P35_07525 PF03796 DnaB-like helicase C terminal domain H4P35_07525 PF00772 DnaB-like helicase N terminal domain H4P35_07530 PF13593 SBF-like CPA transporter family (DUF4137) H4P35_07535 PF04166 Pyridoxal phosphate biosynthetic protein PdxA H4P35_07545 PF13404 AsnC-type helix-turn-helix domain H4P35_07545 PF01037 Lrp/AsnC ligand binding domain H4P35_07570 PF00392 Bacterial regulatory proteins, gntR family H4P35_07570 PF00155 Aminotransferase class I and II H4P35_07620 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain H4P35_07620 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain H4P35_07625 PF00990 Diguanylate cyclase, GGDEF domain H4P35_07630 PF04381 Putative exonuclease, RdgC H4P35_07640 PF00083 Sugar (and other) transporter H4P35_07640 PF08946 Osmosensory transporter coiled coil H4P35_07645 PF00512 His Kinase A (phospho-acceptor) domain H4P35_07645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4P35_07650 PF00072 Response regulator receiver domain H4P35_07650 PF00486 Transcriptional regulatory protein, C terminal H4P35_07655 PF00154 recA bacterial DNA recombination protein H4P35_07660 PF02631 RecX family H4P35_07665 PF03466 LysR substrate binding domain H4P35_07665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_07670 PF08267 Cobalamin-independent synthase, N-terminal domain H4P35_07670 PF01717 Cobalamin-independent synthase, Catalytic domain H4P35_07680 PF00549 CoA-ligase H4P35_07680 PF08442 ATP-grasp domain H4P35_07685 PF00549 CoA-ligase H4P35_07685 PF02629 CoA binding domain H4P35_07690 PF03741 Integral membrane protein TerC family H4P35_07695 PF03741 Integral membrane protein TerC family H4P35_07700 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain H4P35_07700 PF03900 Porphobilinogen deaminase, C-terminal domain H4P35_07720 PF00719 Inorganic pyrophosphatase H4P35_07725 PF01557 Fumarylacetoacetate (FAA) hydrolase family H4P35_07735 PF02562 PhoH-like protein H4P35_07735 PF13638 PIN domain H4P35_07740 PF00578 AhpC/TSA family H4P35_07750 PF00155 Aminotransferase class I and II H4P35_07755 PF00742 Homoserine dehydrogenase H4P35_07755 PF03447 Homoserine dehydrogenase, NAD binding domain H4P35_07755 PF01842 ACT domain H4P35_07760 PF14821 Threonine synthase N terminus H4P35_07760 PF00291 Pyridoxal-phosphate dependent enzyme H4P35_07770 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain H4P35_07775 PF11940 Domain of unknown function (DUF3458) Ig-like fold H4P35_07775 PF17432 Domain of unknown function (DUF3458_C) ARM repeats H4P35_07775 PF01433 Peptidase family M1 domain H4P35_07790 PF01523 Putative modulator of DNA gyrase H4P35_07795 PF00793 DAHP synthetase I family H4P35_07800 PF01565 FAD binding domain H4P35_07800 PF02913 FAD linked oxidases, C-terminal domain H4P35_07805 PF01565 FAD binding domain H4P35_07805 PF02913 FAD linked oxidases, C-terminal domain H4P35_07810 PF01565 FAD binding domain H4P35_07815 PF02754 Cysteine-rich domain H4P35_07815 PF13183 4Fe-4S dicluster domain H4P35_07820 PF02233 NAD(P) transhydrogenase beta subunit H4P35_07825 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch H4P35_07830 PF05222 Alanine dehydrogenase/PNT, N-terminal domain H4P35_07830 PF01262 Alanine dehydrogenase/PNT, C-terminal domain H4P35_07840 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_07845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_07845 PF03466 LysR substrate binding domain H4P35_07855 PF01925 Sulfite exporter TauE/SafE H4P35_07860 PF13417 Glutathione S-transferase, N-terminal domain H4P35_07860 PF00043 Glutathione S-transferase, C-terminal domain H4P35_07865 PF00206 Lyase H4P35_07865 PF08328 Adenylosuccinate lyase C-terminal H4P35_07870 PF01322 Cytochrome C' H4P35_07905 PF00563 EAL domain H4P35_07905 PF03707 Bacterial signalling protein N terminal repeat H4P35_07905 PF00990 Diguanylate cyclase, GGDEF domain H4P35_07915 PF00892 EamA-like transporter family H4P35_07945 PF12867 DinB superfamily H4P35_07945 PF03781 Sulfatase-modifying factor enzyme 1 H4P35_07960 PF13091 PLD-like domain H4P35_07960 PF13396 Phospholipase_D-nuclease N-terminal H4P35_07965 PF01645 Conserved region in glutamate synthase H4P35_07970 PF04143 Sulphur transport H4P35_07985 PF13673 Acetyltransferase (GNAT) domain H4P35_08005 PF17876 Cold shock domain H4P35_08005 PF08461 Ribonuclease R winged-helix domain H4P35_08005 PF08206 Ribonuclease B OB domain H4P35_08005 PF00773 RNB domain H4P35_08005 PF00575 S1 RNA binding domain H4P35_08010 PF08032 RNA 2'-O ribose methyltransferase substrate binding H4P35_08010 PF00588 SpoU rRNA Methylase family H4P35_08015 PF01053 Cys/Met metabolism PLP-dependent enzyme H4P35_08020 PF18331 PKHD-type hydroxylase C-terminal domain H4P35_08020 PF13640 2OG-Fe(II) oxygenase superfamily H4P35_08025 PF00216 Bacterial DNA-binding protein H4P35_08040 PF01618 MotA/TolQ/ExbB proton channel family H4P35_08045 PF02472 Biopolymer transport protein ExbD/TolR H4P35_08050 PF00486 Transcriptional regulatory protein, C terminal H4P35_08050 PF00072 Response regulator receiver domain H4P35_08055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4P35_08055 PF00512 His Kinase A (phospho-acceptor) domain H4P35_08055 PF08521 Two-component sensor kinase N-terminal H4P35_08060 PF02705 K+ potassium transporter H4P35_08065 PF00764 Arginosuccinate synthase H4P35_08070 PF03466 LysR substrate binding domain H4P35_08070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_08075 PF04909 Amidohydrolase H4P35_08095 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain H4P35_08095 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain H4P35_08100 PF00202 Aminotransferase class-III H4P35_08110 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component H4P35_08120 PF03480 Bacterial extracellular solute-binding protein, family 7 H4P35_08140 PF13416 Bacterial extracellular solute-binding protein H4P35_08145 PF00005 ABC transporter H4P35_08145 PF08402 TOBE domain H4P35_08150 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_08155 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_08165 PF02245 Methylpurine-DNA glycosylase (MPG) H4P35_08175 PF02646 RmuC family H4P35_08180 PF01425 Amidase H4P35_08185 PF18158 Adaptive response protein AidB N-terminal domain H4P35_08185 PF02770 Acyl-CoA dehydrogenase, middle domain H4P35_08185 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H4P35_08190 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) H4P35_08195 PF01895 PhoU domain H4P35_08200 PF05506 Domain of unknown function (DUF756) H4P35_08200 PF04185 Phosphoesterase family H4P35_08205 PF04362 Bacterial Fe(2+) trafficking H4P35_08210 PF00696 Amino acid kinase family H4P35_08210 PF00583 Acetyltransferase (GNAT) family H4P35_08215 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_08220 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_08225 PF00005 ABC transporter H4P35_08230 PF00497 Bacterial extracellular solute-binding proteins, family 3 H4P35_08235 PF00795 Carbon-nitrogen hydrolase H4P35_08240 PF00449 Urease alpha-subunit, N-terminal domain H4P35_08240 PF01979 Amidohydrolase family H4P35_08250 PF00701 Dihydrodipicolinate synthetase family H4P35_08255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_08255 PF03466 LysR substrate binding domain H4P35_08260 PF01177 Asp/Glu/Hydantoin racemase H4P35_08265 PF01565 FAD binding domain H4P35_08265 PF02913 FAD linked oxidases, C-terminal domain H4P35_08270 PF11898 Domain of unknown function (DUF3418) H4P35_08270 PF00270 DEAD/DEAH box helicase H4P35_08270 PF00271 Helicase conserved C-terminal domain H4P35_08270 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold H4P35_08270 PF04408 Helicase associated domain (HA2) H4P35_08280 PF07733 Bacterial DNA polymerase III alpha NTPase domain H4P35_08280 PF14579 Helix-hairpin-helix motif H4P35_08280 PF02811 PHP domain H4P35_08280 PF01336 OB-fold nucleic acid binding domain H4P35_08280 PF17657 Bacterial DNA polymerase III alpha subunit finger domain H4P35_08285 PF13439 Glycosyltransferase Family 4 H4P35_08285 PF00534 Glycosyl transferases group 1 H4P35_08290 PF01522 Polysaccharide deacetylase H4P35_08295 PF00535 Glycosyl transferase family 2 H4P35_08305 PF01522 Polysaccharide deacetylase H4P35_08315 PF03692 Putative zinc- or iron-chelating domain H4P35_08330 PF00664 ABC transporter transmembrane region H4P35_08330 PF00005 ABC transporter H4P35_08335 PF02254 TrkA-N domain H4P35_08335 PF00999 Sodium/hydrogen exchanger family H4P35_08345 PF00563 EAL domain H4P35_08345 PF01590 GAF domain H4P35_08345 PF00990 Diguanylate cyclase, GGDEF domain H4P35_08345 PF00360 Phytochrome region H4P35_08350 PF11254 Protein of unknown function (DUF3053) H4P35_08355 PF00575 S1 RNA binding domain H4P35_08355 PF10150 Ribonuclease E/G family H4P35_08385 PF00158 Sigma-54 interaction domain H4P35_08385 PF00072 Response regulator receiver domain H4P35_08385 PF02954 Bacterial regulatory protein, Fis family H4P35_08390 PF02743 Cache domain H4P35_08390 PF00512 His Kinase A (phospho-acceptor) domain H4P35_08390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4P35_08395 PF00375 Sodium:dicarboxylate symporter family H4P35_08400 PF02545 Maf-like protein H4P35_08405 PF02590 Predicted SPOUT methyltransferase H4P35_08415 PF01467 Cytidylyltransferase-like H4P35_08420 PF01218 Coproporphyrinogen III oxidase H4P35_08425 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain H4P35_08425 PF02844 Phosphoribosylglycinamide synthetase, N domain H4P35_08425 PF02843 Phosphoribosylglycinamide synthetase, C domain H4P35_08430 PF01709 Transcriptional regulator H4P35_08435 PF05872 Bacterial protein of unknown function (DUF853) H4P35_08440 PF00180 Isocitrate/isopropylmalate dehydrogenase H4P35_08450 PF07690 Major Facilitator Superfamily H4P35_08455 PF00529 HlyD membrane-fusion protein of T1SS H4P35_08455 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H4P35_08460 PF02321 Outer membrane efflux protein H4P35_08480 PF00107 Zinc-binding dehydrogenase H4P35_08480 PF08240 Alcohol dehydrogenase GroES-like domain H4P35_08485 PF02677 Epoxyqueuosine reductase QueH H4P35_08490 PF03710 Glutamate-ammonia ligase adenylyltransferase H4P35_08490 PF08335 GlnD PII-uridylyltransferase H4P35_08500 PF07498 Rho termination factor, N-terminal domain H4P35_08500 PF07497 Rho termination factor, RNA-binding domain H4P35_08500 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain H4P35_08505 PF00085 Thioredoxin H4P35_08510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4P35_08510 PF01751 Toprim domain H4P35_08510 PF00986 DNA gyrase B subunit, carboxyl terminus H4P35_08510 PF00204 DNA gyrase B H4P35_08520 PF00521 DNA gyrase/topoisomerase IV, subunit A H4P35_08525 PF04235 Protein of unknown function (DUF418) H4P35_08530 PF00202 Aminotransferase class-III H4P35_08540 PF12802 MarR family H4P35_08545 PF00583 Acetyltransferase (GNAT) family H4P35_08550 PF00202 Aminotransferase class-III H4P35_08555 PF06339 Ectoine synthase H4P35_08560 PF05721 Phytanoyl-CoA dioxygenase (PhyH) H4P35_08565 PF03476 MOSC N-terminal beta barrel domain H4P35_08565 PF00111 2Fe-2S iron-sulfur cluster binding domain H4P35_08565 PF03473 MOSC domain H4P35_08570 PF00893 Small Multidrug Resistance protein H4P35_08575 PF02261 Aspartate decarboxylase H4P35_08580 PF00111 2Fe-2S iron-sulfur cluster binding domain H4P35_08580 PF00970 Oxidoreductase FAD-binding domain H4P35_08580 PF00175 Oxidoreductase NAD-binding domain H4P35_08585 PF01266 FAD dependent oxidoreductase H4P35_08590 PF13416 Bacterial extracellular solute-binding protein H4P35_08615 PF00437 Type II/IV secretion system protein H4P35_08635 PF01411 tRNA synthetases class II (A) H4P35_08635 PF02272 DHHA1 domain H4P35_08635 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain H4P35_08640 PF01206 Sulfurtransferase TusA H4P35_08650 PF00886 Ribosomal protein S16 H4P35_08655 PF01782 RimM N-terminal domain H4P35_08660 PF01746 tRNA (Guanine-1)-methyltransferase H4P35_08670 PF00497 Bacterial extracellular solute-binding proteins, family 3 H4P35_08675 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_08680 PF00005 ABC transporter H4P35_08685 PF01266 FAD dependent oxidoreductase H4P35_08690 PF08264 Anticodon-binding domain of tRNA H4P35_08690 PF00133 tRNA synthetases class I (I, L, M and V) H4P35_08690 PF10458 Valyl tRNA synthetase tRNA binding arm H4P35_08695 PF00334 Nucleoside diphosphate kinase H4P35_08700 PF04055 Radical SAM superfamily H4P35_08710 PF04551 GcpE protein H4P35_08715 PF03129 Anticodon binding domain H4P35_08715 PF13393 Histidyl-tRNA synthetase H4P35_08720 PF09976 Tetratricopeptide repeat-like domain H4P35_08725 PF13360 PQQ-like domain H4P35_08730 PF01926 50S ribosome-binding GTPase H4P35_08730 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal H4P35_08735 PF00155 Aminotransferase class I and II H4P35_08740 PF17209 Hfq protein H4P35_08745 PF01926 50S ribosome-binding GTPase H4P35_08745 PF13167 GTP-binding GTPase N-terminal H4P35_08745 PF16360 GTP-binding GTPase Middle Region H4P35_08750 PF01145 SPFH domain / Band 7 family H4P35_08750 PF12221 Bacterial membrane protein N terminal H4P35_08755 PF01145 SPFH domain / Band 7 family H4P35_08760 PF13393 Histidyl-tRNA synthetase H4P35_08765 PF00709 Adenylosuccinate synthetase H4P35_08770 PF00156 Phosphoribosyl transferase domain H4P35_08775 PF01165 Ribosomal protein S21 H4P35_08780 PF08275 DNA primase catalytic core, N-terminal domain H4P35_08780 PF10410 DnaB-helicase binding domain of primase H4P35_08780 PF08278 DNA primase DnaG DnaB-binding H4P35_08780 PF01807 CHC2 zinc finger H4P35_08785 PF04546 Sigma-70, non-essential region H4P35_08785 PF04542 Sigma-70 region 2 H4P35_08785 PF03979 Sigma-70 factor, region 1.1 H4P35_08785 PF00140 Sigma-70 factor, region 1.2 H4P35_08785 PF04545 Sigma-70, region 4 H4P35_08785 PF04539 Sigma-70 region 3 H4P35_08800 PF12951 Passenger-associated-transport-repeat H4P35_08830 PF13629 Pilus formation protein N terminal region H4P35_08830 PF00263 Bacterial type II and III secretion system protein H4P35_08830 PF04972 BON domain H4P35_08835 PF00437 Type II/IV secretion system protein H4P35_08860 PF01636 Phosphotransferase enzyme family H4P35_08865 PF01207 Dihydrouridine synthase (Dus) H4P35_08875 PF03631 Virulence factor BrkB H4P35_08885 PF02696 Uncharacterized ACR, YdiU/UPF0061 family H4P35_08890 PF00486 Transcriptional regulatory protein, C terminal H4P35_08890 PF00072 Response regulator receiver domain H4P35_08895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4P35_08895 PF00512 His Kinase A (phospho-acceptor) domain H4P35_08895 PF07689 KaiB domain H4P35_08905 PF00990 Diguanylate cyclase, GGDEF domain H4P35_08905 PF00563 EAL domain H4P35_08905 PF03707 Bacterial signalling protein N terminal repeat H4P35_08910 PF01264 Chorismate synthase H4P35_08915 PF01435 Peptidase family M48 H4P35_08935 PF00196 Bacterial regulatory proteins, luxR family H4P35_08935 PF00072 Response regulator receiver domain H4P35_08940 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H4P35_08940 PF00529 HlyD membrane-fusion protein of T1SS H4P35_08945 PF00005 ABC transporter H4P35_08945 PF03412 Peptidase C39 family H4P35_08945 PF00664 ABC transporter transmembrane region H4P35_08955 PF02321 Outer membrane efflux protein H4P35_08960 PF00330 Aconitase family (aconitate hydratase) H4P35_08965 PF00694 Aconitase C-terminal domain H4P35_08970 PF00180 Isocitrate/isopropylmalate dehydrogenase H4P35_08975 PF01118 Semialdehyde dehydrogenase, NAD binding domain H4P35_08975 PF02774 Semialdehyde dehydrogenase, dimerisation domain H4P35_08990 PF01416 tRNA pseudouridine synthase H4P35_08995 PF03480 Bacterial extracellular solute-binding protein, family 7 H4P35_09000 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase H4P35_09015 PF00893 Small Multidrug Resistance protein H4P35_09035 PF00920 Dehydratase family H4P35_09040 PF03480 Bacterial extracellular solute-binding protein, family 7 H4P35_09045 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component H4P35_09050 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component H4P35_09055 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family H4P35_09055 PF00356 Bacterial regulatory proteins, lacI family H4P35_09065 PF00850 Histone deacetylase domain H4P35_09070 PF07883 Cupin domain H4P35_09075 PF00005 ABC transporter H4P35_09075 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H4P35_09080 PF12911 N-terminal TM domain of oligopeptide transport permease C H4P35_09080 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_09085 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_09090 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H4P35_09095 PF07687 Peptidase dimerisation domain H4P35_09095 PF01546 Peptidase family M20/M25/M40 H4P35_09100 PF07729 FCD domain H4P35_09100 PF00392 Bacterial regulatory proteins, gntR family H4P35_09110 PF06969 HemN C-terminal domain H4P35_09110 PF04055 Radical SAM superfamily H4P35_09115 PF00072 Response regulator receiver domain H4P35_09115 PF00196 Bacterial regulatory proteins, luxR family H4P35_09120 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) H4P35_09120 PF02824 TGS domain H4P35_09120 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain H4P35_09120 PF03129 Anticodon binding domain H4P35_09125 PF00707 Translation initiation factor IF-3, C-terminal domain H4P35_09125 PF05198 Translation initiation factor IF-3, N-terminal domain H4P35_09130 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain H4P35_09130 PF02951 Prokaryotic glutathione synthetase, N-terminal domain H4P35_09140 PF00381 PTS HPr component phosphorylation site H4P35_09145 PF05524 PEP-utilising enzyme, N-terminal H4P35_09145 PF00391 PEP-utilising enzyme, mobile domain H4P35_09145 PF02896 PEP-utilising enzyme, TIM barrel domain H4P35_09150 PF00909 Ammonium Transporter Family H4P35_09155 PF00543 Nitrogen regulatory protein P-II H4P35_09160 PF04380 Membrane fusogenic activity H4P35_09165 PF13335 Magnesium chelatase, subunit ChlI C-terminal H4P35_09165 PF01078 Magnesium chelatase, subunit ChlI H4P35_09170 PF01632 Ribosomal protein L35 H4P35_09175 PF00453 Ribosomal protein L20 H4P35_09180 PF01409 tRNA synthetases class II core domain (F) H4P35_09180 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain H4P35_09185 PF01588 Putative tRNA binding domain H4P35_09185 PF03147 Ferredoxin-fold anticodon binding domain H4P35_09185 PF03484 tRNA synthetase B5 domain H4P35_09185 PF03483 B3/4 domain H4P35_09185 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain H4P35_09190 PF00216 Bacterial DNA-binding protein H4P35_09230 PF02567 Phenazine biosynthesis-like protein H4P35_09235 PF00583 Acetyltransferase (GNAT) family H4P35_09260 PF01037 Lrp/AsnC ligand binding domain H4P35_09290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_09290 PF03466 LysR substrate binding domain H4P35_09295 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_09310 PF03466 LysR substrate binding domain H4P35_09310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_09315 PF13593 SBF-like CPA transporter family (DUF4137) H4P35_09325 PF00664 ABC transporter transmembrane region H4P35_09325 PF00005 ABC transporter H4P35_09330 PF00248 Aldo/keto reductase family H4P35_09345 PF00149 Calcineurin-like phosphoesterase H4P35_09350 PF17092 Penicillin-binding protein OB-like domain H4P35_09350 PF00912 Transglycosylase H4P35_09350 PF00905 Penicillin binding protein transpeptidase domain H4P35_09360 PF07690 Major Facilitator Superfamily H4P35_09365 PF17151 Periplasmic sensor domain H4P35_09365 PF00990 Diguanylate cyclase, GGDEF domain H4P35_09370 PF00326 Prolyl oligopeptidase family H4P35_09385 PF00817 impB/mucB/samB family H4P35_09385 PF11799 impB/mucB/samB family C-terminal domain H4P35_09385 PF11798 IMS family HHH motif H4P35_09390 PF09424 Yqey-like protein H4P35_09400 PF00109 Beta-ketoacyl synthase, N-terminal domain H4P35_09400 PF02801 Beta-ketoacyl synthase, C-terminal domain H4P35_09415 PF02801 Beta-ketoacyl synthase, C-terminal domain H4P35_09415 PF00109 Beta-ketoacyl synthase, N-terminal domain H4P35_09455 PF07977 FabA-like domain H4P35_09465 PF00550 Phosphopantetheine attachment site H4P35_09470 PF00550 Phosphopantetheine attachment site H4P35_09485 PF01648 4'-phosphopantetheinyl transferase superfamily H4P35_09490 PF00970 Oxidoreductase FAD-binding domain H4P35_09490 PF00175 Oxidoreductase NAD-binding domain H4P35_09490 PF00042 Globin H4P35_09495 PF02082 Transcriptional regulator H4P35_09500 PF01266 FAD dependent oxidoreductase H4P35_09510 PF01619 Proline dehydrogenase H4P35_09525 PF03466 LysR substrate binding domain H4P35_09525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_09530 PF03466 LysR substrate binding domain H4P35_09530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_09535 PF02798 Glutathione S-transferase, N-terminal domain H4P35_09545 PF01638 HxlR-like helix-turn-helix H4P35_09550 PF07690 Major Facilitator Superfamily H4P35_09555 PF02779 Transketolase, pyrimidine binding domain H4P35_09555 PF02780 Transketolase, C-terminal domain H4P35_09560 PF00456 Transketolase, thiamine diphosphate binding domain H4P35_09565 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component H4P35_09575 PF03480 Bacterial extracellular solute-binding protein, family 7 H4P35_09575 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component H4P35_09585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_09585 PF03466 LysR substrate binding domain H4P35_09590 PF02770 Acyl-CoA dehydrogenase, middle domain H4P35_09590 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H4P35_09590 PF12806 Acetyl-CoA dehydrogenase C-terminal like H4P35_09590 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H4P35_09595 PF13193 AMP-binding enzyme C-terminal domain H4P35_09595 PF00501 AMP-binding enzyme H4P35_09605 PF01177 Asp/Glu/Hydantoin racemase H4P35_09610 PF00115 Cytochrome C and Quinol oxidase polypeptide I H4P35_09620 PF13545 Crp-like helix-turn-helix domain H4P35_09625 PF07732 Multicopper oxidase H4P35_09625 PF00394 Multicopper oxidase H4P35_09630 PF13442 Cytochrome C oxidase, cbb3-type, subunit III H4P35_09635 PF01810 LysE type translocator H4P35_09640 PF07992 Pyridine nucleotide-disulphide oxidoreductase H4P35_09640 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H4P35_09650 PF01810 LysE type translocator H4P35_09660 PF00155 Aminotransferase class I and II H4P35_09660 PF00392 Bacterial regulatory proteins, gntR family H4P35_09670 PF00892 EamA-like transporter family H4P35_09675 PF03055 Retinal pigment epithelial membrane protein H4P35_09680 PF00892 EamA-like transporter family H4P35_09690 PF01546 Peptidase family M20/M25/M40 H4P35_09690 PF07687 Peptidase dimerisation domain H4P35_09695 PF00378 Enoyl-CoA hydratase/isomerase H4P35_09710 PF00501 AMP-binding enzyme H4P35_09710 PF13193 AMP-binding enzyme C-terminal domain H4P35_09715 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain H4P35_09715 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain H4P35_09720 PF00248 Aldo/keto reductase family H4P35_09725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_09725 PF03466 LysR substrate binding domain H4P35_09735 PF00990 Diguanylate cyclase, GGDEF domain H4P35_09740 PF00550 Phosphopantetheine attachment site H4P35_09740 PF08659 KR domain H4P35_09740 PF02801 Beta-ketoacyl synthase, C-terminal domain H4P35_09740 PF00109 Beta-ketoacyl synthase, N-terminal domain H4P35_09740 PF16197 Ketoacyl-synthetase C-terminal extension H4P35_09740 PF14765 Polyketide synthase dehydratase H4P35_09740 PF08240 Alcohol dehydrogenase GroES-like domain H4P35_09740 PF00698 Acyl transferase domain H4P35_09740 PF00107 Zinc-binding dehydrogenase H4P35_09745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_09745 PF03466 LysR substrate binding domain H4P35_09750 PF02678 Pirin H4P35_09750 PF05726 Pirin C-terminal cupin domain H4P35_09760 PF13247 4Fe-4S dicluster domain H4P35_09765 PF03916 Polysulphide reductase, NrfD H4P35_09770 PF00384 Molybdopterin oxidoreductase H4P35_09770 PF01568 Molydopterin dinucleotide binding domain H4P35_09770 PF04879 Molybdopterin oxidoreductase Fe4S4 domain H4P35_09780 PF03918 Cytochrome C biogenesis protein H4P35_09785 PF08534 Redoxin H4P35_09790 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal H4P35_09790 PF01578 Cytochrome C assembly protein H4P35_09805 PF01578 Cytochrome C assembly protein H4P35_09810 PF03379 CcmB protein H4P35_09815 PF00005 ABC transporter H4P35_09820 PF03264 NapC/NirT cytochrome c family, N-terminal region H4P35_09825 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) H4P35_09830 PF01568 Molydopterin dinucleotide binding domain H4P35_09830 PF04879 Molybdopterin oxidoreductase Fe4S4 domain H4P35_09830 PF00384 Molybdopterin oxidoreductase H4P35_09845 PF05853 beta-keto acid cleavage enzyme H4P35_09850 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain H4P35_09850 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain H4P35_09850 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain H4P35_09855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_09855 PF03466 LysR substrate binding domain H4P35_09860 PF07715 TonB-dependent Receptor Plug Domain H4P35_09860 PF00593 TonB dependent receptor H4P35_09870 PF08281 Sigma-70, region 4 H4P35_09870 PF04542 Sigma-70 region 2 H4P35_09880 PF00005 ABC transporter H4P35_09885 PF12399 Branched-chain amino acid ATP-binding cassette transporter H4P35_09885 PF00005 ABC transporter H4P35_09890 PF02653 Branched-chain amino acid transport system / permease component H4P35_09890 PF11862 Domain of unknown function (DUF3382) H4P35_09895 PF02653 Branched-chain amino acid transport system / permease component H4P35_09900 PF13458 Periplasmic binding protein H4P35_09905 PF01425 Amidase H4P35_09910 PF03466 LysR substrate binding domain H4P35_09910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_09920 PF00920 Dehydratase family H4P35_09925 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_09930 PF00563 EAL domain H4P35_09930 PF00990 Diguanylate cyclase, GGDEF domain H4P35_09930 PF13426 PAS domain H4P35_09935 PF00378 Enoyl-CoA hydratase/isomerase H4P35_09945 PF03466 LysR substrate binding domain H4P35_09945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_09955 PF00293 NUDIX domain H4P35_09970 PF00392 Bacterial regulatory proteins, gntR family H4P35_09970 PF07702 UTRA domain H4P35_09975 PF00501 AMP-binding enzyme H4P35_09975 PF13193 AMP-binding enzyme C-terminal domain H4P35_09985 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_09995 PF01965 DJ-1/PfpI family H4P35_09995 PF12833 Helix-turn-helix domain H4P35_10000 PF01965 DJ-1/PfpI family H4P35_10005 PF00664 ABC transporter transmembrane region H4P35_10005 PF00005 ABC transporter H4P35_10010 PF00005 ABC transporter H4P35_10010 PF00664 ABC transporter transmembrane region H4P35_10015 PF03466 LysR substrate binding domain H4P35_10015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_10020 PF00005 ABC transporter H4P35_10025 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_10030 PF09084 NMT1/THI5 like H4P35_10040 PF06719 AraC-type transcriptional regulator N-terminus H4P35_10040 PF12833 Helix-turn-helix domain H4P35_10045 PF08669 Glycine cleavage T-protein C-terminal barrel domain H4P35_10045 PF01266 FAD dependent oxidoreductase H4P35_10045 PF01571 Aminomethyltransferase folate-binding domain H4P35_10045 PF16350 FAD dependent oxidoreductase central domain H4P35_10055 PF01012 Electron transfer flavoprotein domain H4P35_10060 PF01012 Electron transfer flavoprotein domain H4P35_10060 PF00766 Electron transfer flavoprotein FAD-binding domain H4P35_10065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_10065 PF03466 LysR substrate binding domain H4P35_10075 PF01914 MarC family integral membrane protein H4P35_10080 PF00296 Luciferase-like monooxygenase H4P35_10090 PF03869 Arc-like DNA binding domain H4P35_10125 PF00392 Bacterial regulatory proteins, gntR family H4P35_10125 PF07729 FCD domain H4P35_10130 PF00171 Aldehyde dehydrogenase family H4P35_10135 PF00677 Lumazine binding domain H4P35_10145 PF01425 Amidase H4P35_10150 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H4P35_10155 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_10160 PF12911 N-terminal TM domain of oligopeptide transport permease C H4P35_10160 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_10165 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H4P35_10165 PF00005 ABC transporter H4P35_10170 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H4P35_10175 PF07859 alpha/beta hydrolase fold H4P35_10180 PF04299 Putative FMN-binding domain H4P35_10185 PF00596 Class II Aldolase and Adducin N-terminal domain H4P35_10190 PF00266 Aminotransferase class-V H4P35_10195 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H4P35_10205 PF13302 Acetyltransferase (GNAT) domain H4P35_10215 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_10220 PF00205 Thiamine pyrophosphate enzyme, central domain H4P35_10220 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain H4P35_10220 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain H4P35_10225 PF12833 Helix-turn-helix domain H4P35_10225 PF00072 Response regulator receiver domain H4P35_10230 PF00403 Heavy-metal-associated domain H4P35_10235 PF13411 MerR HTH family regulatory protein H4P35_10245 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal H4P35_10245 PF00676 Dehydrogenase E1 component H4P35_10250 PF02779 Transketolase, pyrimidine binding domain H4P35_10250 PF02780 Transketolase, C-terminal domain H4P35_10255 PF02817 e3 binding domain H4P35_10255 PF00364 Biotin-requiring enzyme H4P35_10255 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) H4P35_10260 PF07992 Pyridine nucleotide-disulphide oxidoreductase H4P35_10260 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H4P35_10270 PF14698 Argininosuccinate lyase C-terminal H4P35_10270 PF00206 Lyase H4P35_10275 PF00924 Mechanosensitive ion channel H4P35_10280 PF00795 Carbon-nitrogen hydrolase H4P35_10280 PF02540 NAD synthase H4P35_10285 PF00543 Nitrogen regulatory protein P-II H4P35_10290 PF00482 Type II secretion system (T2SS), protein F H4P35_10295 PF00263 Bacterial type II and III secretion system protein H4P35_10295 PF03958 Bacterial type II/III secretion system short domain H4P35_10300 PF00437 Type II/IV secretion system protein H4P35_10325 PF11612 Type II secretion system (T2SS), protein J H4P35_10325 PF07963 Prokaryotic N-terminal methylation motif H4P35_10330 PF02501 Type II secretion system (T2SS), protein I H4P35_10330 PF07963 Prokaryotic N-terminal methylation motif H4P35_10335 PF12019 Type II transport protein GspH H4P35_10335 PF07963 Prokaryotic N-terminal methylation motif H4P35_10340 PF07963 Prokaryotic N-terminal methylation motif H4P35_10340 PF08334 Type II secretion system (T2SS), protein G H4P35_10360 PF04185 Phosphoesterase family H4P35_10360 PF05506 Domain of unknown function (DUF756) H4P35_10365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_10365 PF03466 LysR substrate binding domain H4P35_10375 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H4P35_10380 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_10385 PF12911 N-terminal TM domain of oligopeptide transport permease C H4P35_10385 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_10390 PF00005 ABC transporter H4P35_10390 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H4P35_10395 PF01810 LysE type translocator H4P35_10400 PF07152 YaeQ protein H4P35_10415 PF07690 Major Facilitator Superfamily H4P35_10420 PF00990 Diguanylate cyclase, GGDEF domain H4P35_10425 PF07702 UTRA domain H4P35_10425 PF00392 Bacterial regulatory proteins, gntR family H4P35_10430 PF13458 Periplasmic binding protein H4P35_10435 PF02653 Branched-chain amino acid transport system / permease component H4P35_10440 PF11862 Domain of unknown function (DUF3382) H4P35_10440 PF02653 Branched-chain amino acid transport system / permease component H4P35_10445 PF12399 Branched-chain amino acid ATP-binding cassette transporter H4P35_10445 PF00005 ABC transporter H4P35_10450 PF00005 ABC transporter H4P35_10455 PF00330 Aconitase family (aconitate hydratase) H4P35_10460 PF00694 Aconitase C-terminal domain H4P35_10465 PF02538 Hydantoinase B/oxoprolinase H4P35_10470 PF05378 Hydantoinase/oxoprolinase N-terminal region H4P35_10470 PF01968 Hydantoinase/oxoprolinase H4P35_10475 PF00857 Isochorismatase family H4P35_10480 PF03358 NADPH-dependent FMN reductase H4P35_10480 PF04205 FMN-binding domain H4P35_10480 PF00890 FAD binding domain H4P35_10490 PF04345 Chorismate lyase H4P35_10495 PF01479 S4 domain H4P35_10495 PF00849 RNA pseudouridylate synthase H4P35_10500 PF03466 LysR substrate binding domain H4P35_10500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_10505 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H4P35_10505 PF00529 HlyD membrane-fusion protein of T1SS H4P35_10510 PF00873 AcrB/AcrD/AcrF family H4P35_10515 PF02321 Outer membrane efflux protein H4P35_10520 PF04226 Transglycosylase associated protein H4P35_10525 PF02630 SCO1/SenC H4P35_10530 PF01432 Peptidase family M3 H4P35_10535 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain H4P35_10535 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain H4P35_10540 PF00196 Bacterial regulatory proteins, luxR family H4P35_10540 PF00072 Response regulator receiver domain H4P35_10545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4P35_10545 PF00512 His Kinase A (phospho-acceptor) domain H4P35_10545 PF00989 PAS fold H4P35_10550 PF17831 Pyruvate dehydrogenase E1 component middle domain H4P35_10550 PF00456 Transketolase, thiamine diphosphate binding domain H4P35_10555 PF00364 Biotin-requiring enzyme H4P35_10555 PF02817 e3 binding domain H4P35_10555 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) H4P35_10560 PF07992 Pyridine nucleotide-disulphide oxidoreductase H4P35_10560 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H4P35_10565 PF07690 Major Facilitator Superfamily H4P35_10570 PF01047 MarR family H4P35_10595 PF00132 Bacterial transferase hexapeptide (six repeats) H4P35_10595 PF14602 Hexapeptide repeat of succinyl-transferase H4P35_10595 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal H4P35_10600 PF04989 Cephalosporin hydroxylase H4P35_10610 PF08484 C-methyltransferase C-terminal domain H4P35_10610 PF08421 Putative zinc binding domain H4P35_10615 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase H4P35_10620 PF16363 GDP-mannose 4,6 dehydratase H4P35_10625 PF00483 Nucleotidyl transferase H4P35_10635 PF12445 Flagellin protein H4P35_10635 PF00669 Bacterial flagellin N-terminal helical region H4P35_10635 PF00700 Bacterial flagellin C-terminal helical region H4P35_10640 PF10119 Predicted methyltransferase regulatory domain H4P35_10640 PF13847 Methyltransferase domain H4P35_10645 PF04545 Sigma-70, region 4 H4P35_10645 PF04539 Sigma-70 region 3 H4P35_10645 PF04542 Sigma-70 region 2 H4P35_10650 PF05247 Flagellar transcriptional activator (FlhD) H4P35_10655 PF05280 Flagellar transcriptional activator (FlhC) H4P35_10660 PF01618 MotA/TolQ/ExbB proton channel family H4P35_10665 PF00691 OmpA family H4P35_10665 PF13677 Membrane MotB of proton-channel complex MotA/MotB H4P35_10670 PF00072 Response regulator receiver domain H4P35_10675 PF02895 Signal transducing histidine kinase, homodimeric domain H4P35_10675 PF01584 CheW-like domain H4P35_10675 PF09078 CheY binding H4P35_10675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4P35_10675 PF01627 Hpt domain H4P35_10680 PF01584 CheW-like domain H4P35_10685 PF00672 HAMP domain H4P35_10685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H4P35_10685 PF02203 Tar ligand binding domain homologue H4P35_10690 PF03705 CheR methyltransferase, all-alpha domain H4P35_10690 PF01739 CheR methyltransferase, SAM binding domain H4P35_10695 PF01339 CheB methylesterase H4P35_10695 PF00072 Response regulator receiver domain H4P35_10700 PF00072 Response regulator receiver domain H4P35_10705 PF04344 Chemotaxis phosphatase, CheZ H4P35_10710 PF00672 HAMP domain H4P35_10710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H4P35_10715 PF01312 FlhB HrpN YscU SpaS Family H4P35_10720 PF00771 FHIPEP family H4P35_10725 PF00448 SRP54-type protein, GTPase domain H4P35_10735 PF04316 Anti-sigma-28 factor, FlgM H4P35_10745 PF00460 Flagella basal body rod protein H4P35_10750 PF06429 Flagellar basal body rod FlgEFG protein C-terminal H4P35_10750 PF00460 Flagella basal body rod protein H4P35_10755 PF13861 FlgD Tudor-like domain H4P35_10755 PF13860 FlgD Ig-like domain H4P35_10755 PF03963 Flagellar hook capping protein - N-terminal region H4P35_10760 PF00460 Flagella basal body rod protein H4P35_10760 PF06429 Flagellar basal body rod FlgEFG protein C-terminal H4P35_10760 PF07559 Flagellar basal body protein FlaE H4P35_10765 PF00460 Flagella basal body rod protein H4P35_10765 PF06429 Flagellar basal body rod FlgEFG protein C-terminal H4P35_10770 PF06429 Flagellar basal body rod FlgEFG protein C-terminal H4P35_10770 PF00460 Flagella basal body rod protein H4P35_10775 PF02107 Flagellar L-ring protein H4P35_10780 PF02119 Flagellar P-ring protein H4P35_10785 PF10135 Rod binding protein H4P35_10785 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase H4P35_10790 PF06429 Flagellar basal body rod FlgEFG protein C-terminal H4P35_10790 PF00460 Flagella basal body rod protein H4P35_10795 PF00669 Bacterial flagellin N-terminal helical region H4P35_10800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H4P35_10800 PF02203 Tar ligand binding domain homologue H4P35_10800 PF00672 HAMP domain H4P35_10805 PF02203 Tar ligand binding domain homologue H4P35_10805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H4P35_10805 PF00672 HAMP domain H4P35_10815 PF02203 Tar ligand binding domain homologue H4P35_10815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H4P35_10815 PF00672 HAMP domain H4P35_10820 PF08447 PAS fold H4P35_10820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H4P35_10825 PF01311 Bacterial export proteins, family 1 H4P35_10830 PF01313 Bacterial export proteins, family 3 H4P35_10835 PF00813 FliP family H4P35_10840 PF04347 Flagellar biosynthesis protein, FliO H4P35_10845 PF16973 Flagellar motor switch protein FliN N-terminal H4P35_10845 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term H4P35_10850 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term H4P35_10850 PF02154 Flagellar motor switch protein FliM H4P35_10855 PF03748 Flagellar basal body-associated protein FliL H4P35_10870 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain H4P35_10870 PF18269 T3SS EscN ATPase C-terminal domain H4P35_10875 PF02108 Flagellar assembly protein FliH H4P35_10880 PF14841 FliG middle domain H4P35_10880 PF14842 FliG N-terminal domain H4P35_10880 PF01706 FliG C-terminal domain H4P35_10885 PF01514 Secretory protein of YscJ/FliF family H4P35_10885 PF08345 Flagellar M-ring protein C-terminal H4P35_10890 PF02049 Flagellar hook-basal body complex protein FliE H4P35_10900 PF01312 FlhB HrpN YscU SpaS Family H4P35_10915 PF02561 Flagellar protein FliS H4P35_10920 PF07195 Flagellar hook-associated protein 2 C-terminus H4P35_10920 PF02465 Flagellar hook-associated protein 2 N-terminus H4P35_10935 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H4P35_10935 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H4P35_10935 PF02770 Acyl-CoA dehydrogenase, middle domain H4P35_10940 PF02515 CoA-transferase family III H4P35_10945 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_10955 PF02875 Mur ligase family, glutamate ligase domain H4P35_10955 PF08245 Mur ligase middle domain H4P35_10970 PF00156 Phosphoribosyl transferase domain H4P35_10975 PF01863 Protein of unknown function DUF45 H4P35_10980 PF02600 Disulfide bond formation protein DsbB H4P35_10990 PF01909 Nucleotidyltransferase domain H4P35_10990 PF01966 HD domain H4P35_10990 PF08335 GlnD PII-uridylyltransferase H4P35_10995 PF00557 Metallopeptidase family M24 H4P35_11000 PF00318 Ribosomal protein S2 H4P35_11005 PF00889 Elongation factor TS H4P35_11010 PF00696 Amino acid kinase family H4P35_11015 PF01765 Ribosome recycling factor H4P35_11020 PF01255 Putative undecaprenyl diphosphate synthase H4P35_11030 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain H4P35_11030 PF13288 DXP reductoisomerase C-terminal domain H4P35_11030 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase H4P35_11035 PF02163 Peptidase family M50 H4P35_11035 PF17820 PDZ domain H4P35_11040 PF01103 Surface antigen H4P35_11040 PF07244 Surface antigen variable number repeat H4P35_11045 PF03938 Outer membrane protein (OmpH-like) H4P35_11050 PF00132 Bacterial transferase hexapeptide (six repeats) H4P35_11050 PF14602 Hexapeptide repeat of succinyl-transferase H4P35_11050 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD H4P35_11055 PF07977 FabA-like domain H4P35_11060 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 H4P35_11060 PF00132 Bacterial transferase hexapeptide (six repeats) H4P35_11065 PF02684 Lipid-A-disaccharide synthetase H4P35_11070 PF01351 Ribonuclease HII H4P35_11075 PF08032 RNA 2'-O ribose methyltransferase substrate binding H4P35_11075 PF00588 SpoU rRNA Methylase family H4P35_11100 PF03618 Kinase/pyrophosphorylase H4P35_11105 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain H4P35_11105 PF02896 PEP-utilising enzyme, TIM barrel domain H4P35_11105 PF00391 PEP-utilising enzyme, mobile domain H4P35_11110 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain H4P35_11110 PF12833 Helix-turn-helix domain H4P35_11110 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain H4P35_11110 PF02805 Metal binding domain of Ada H4P35_11115 PF00117 Glutamine amidotransferase class-I H4P35_11115 PF00958 GMP synthase C terminal domain H4P35_11115 PF02540 NAD synthase H4P35_11125 PF16200 C-terminal region of band_7 H4P35_11125 PF01145 SPFH domain / Band 7 family H4P35_11130 PF00990 Diguanylate cyclase, GGDEF domain H4P35_11135 PF01668 SmpB protein H4P35_11140 PF03364 Polyketide cyclase / dehydrase and lipid transport H4P35_11145 PF03658 RnfH family Ubiquitin H4P35_11150 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H4P35_11150 PF02770 Acyl-CoA dehydrogenase, middle domain H4P35_11150 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H4P35_11155 PF00378 Enoyl-CoA hydratase/isomerase H4P35_11160 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase H4P35_11160 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase H4P35_11175 PF01571 Aminomethyltransferase folate-binding domain H4P35_11180 PF02618 YceG-like family H4P35_11185 PF02223 Thymidylate kinase H4P35_11190 PF12169 DNA polymerase III subunits gamma and tau domain III H4P35_11195 PF01026 TatD related DNase H4P35_11210 PF00497 Bacterial extracellular solute-binding proteins, family 3 H4P35_11215 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_11220 PF00005 ABC transporter H4P35_11225 PF00491 Arginase family H4P35_11230 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase H4P35_11230 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain H4P35_11240 PF03099 Biotin/lipoate A/B protein ligase family H4P35_11240 PF10437 Bacterial lipoate protein ligase C-terminus H4P35_11255 PF02798 Glutathione S-transferase, N-terminal domain H4P35_11255 PF00043 Glutathione S-transferase, C-terminal domain H4P35_11265 PF01037 Lrp/AsnC ligand binding domain H4P35_11270 PF00255 Glutathione peroxidase H4P35_11280 PF08447 PAS fold H4P35_11280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H4P35_11285 PF03441 FAD binding domain of DNA photolyase H4P35_11285 PF00875 DNA photolyase H4P35_11290 PF02515 CoA-transferase family III H4P35_11295 PF00578 AhpC/TSA family H4P35_11310 PF01548 Transposase H4P35_11310 PF02371 Transposase IS116/IS110/IS902 family H4P35_11320 PF03880 DbpA RNA binding domain H4P35_11320 PF00270 DEAD/DEAH box helicase H4P35_11320 PF00271 Helicase conserved C-terminal domain H4P35_11330 PF09339 IclR helix-turn-helix domain H4P35_11330 PF01614 Bacterial transcriptional regulator H4P35_11335 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain H4P35_11335 PF00205 Thiamine pyrophosphate enzyme, central domain H4P35_11335 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain H4P35_11340 PF01515 Phosphate acetyl/butaryl transferase H4P35_11345 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H4P35_11350 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_11355 PF12911 N-terminal TM domain of oligopeptide transport permease C H4P35_11355 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_11360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H4P35_11360 PF00005 ABC transporter H4P35_11365 PF00005 ABC transporter H4P35_11365 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H4P35_11370 PF01979 Amidohydrolase family H4P35_11375 PF02492 CobW/HypB/UreG, nucleotide-binding domain H4P35_11375 PF07683 Cobalamin synthesis protein cobW C-terminal domain H4P35_11390 PF00392 Bacterial regulatory proteins, gntR family H4P35_11390 PF00155 Aminotransferase class I and II H4P35_11395 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_11400 PF00005 ABC transporter H4P35_11405 PF04069 Substrate binding domain of ABC-type glycine betaine transport system H4P35_11410 PF01227 GTP cyclohydrolase I H4P35_11415 PF00072 Response regulator receiver domain H4P35_11415 PF00196 Bacterial regulatory proteins, luxR family H4P35_11420 PF07730 Histidine kinase H4P35_11420 PF17200 Single Cache domain 2 H4P35_11425 PF02554 Carbon starvation protein CstA H4P35_11425 PF13722 5TM C-terminal transporter carbon starvation CstA H4P35_11430 PF04328 Selenoprotein, putative H4P35_11435 PF02371 Transposase IS116/IS110/IS902 family H4P35_11435 PF01548 Transposase H4P35_11460 PF00210 Ferritin-like domain H4P35_11470 PF02567 Phenazine biosynthesis-like protein H4P35_11475 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_11490 PF03466 LysR substrate binding domain H4P35_11490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_11495 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_11500 PF01425 Amidase H4P35_11505 PF00724 NADH:flavin oxidoreductase / NADH oxidase family H4P35_11505 PF07992 Pyridine nucleotide-disulphide oxidoreductase H4P35_11510 PF01042 Endoribonuclease L-PSP H4P35_11515 PF03466 LysR substrate binding domain H4P35_11515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_11520 PF00990 Diguanylate cyclase, GGDEF domain H4P35_11530 PF01625 Peptide methionine sulfoxide reductase H4P35_11535 PF01641 SelR domain H4P35_11545 PF00174 Oxidoreductase molybdopterin binding domain H4P35_11550 PF01292 Prokaryotic cytochrome b561 H4P35_11555 PF00486 Transcriptional regulatory protein, C terminal H4P35_11555 PF00072 Response regulator receiver domain H4P35_11560 PF00672 HAMP domain H4P35_11560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4P35_11560 PF18698 Histidine kinase sensor domain H4P35_11560 PF00512 His Kinase A (phospho-acceptor) domain H4P35_11560 PF00989 PAS fold H4P35_11565 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain H4P35_11565 PF00391 PEP-utilising enzyme, mobile domain H4P35_11575 PF00892 EamA-like transporter family H4P35_11585 PF04542 Sigma-70 region 2 H4P35_11585 PF08281 Sigma-70, region 4 H4P35_11595 PF03795 YCII-related domain H4P35_11605 PF03795 YCII-related domain H4P35_11610 PF01381 Helix-turn-helix H4P35_11610 PF06114 IrrE N-terminal-like domain H4P35_11610 PF09856 Predicted transcriptional regulator (DUF2083) H4P35_11620 PF00691 OmpA family H4P35_11620 PF05736 OprF membrane domain H4P35_11625 PF01618 MotA/TolQ/ExbB proton channel family H4P35_11630 PF13302 Acetyltransferase (GNAT) domain H4P35_11640 PF04463 Protein of unknown function (DUF523) H4P35_11655 PF00440 Bacterial regulatory proteins, tetR family H4P35_11660 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_11665 PF00924 Mechanosensitive ion channel H4P35_11700 PF07687 Peptidase dimerisation domain H4P35_11700 PF01546 Peptidase family M20/M25/M40 H4P35_11705 PF00005 ABC transporter H4P35_11705 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H4P35_11710 PF00005 ABC transporter H4P35_11710 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H4P35_11715 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_11715 PF12911 N-terminal TM domain of oligopeptide transport permease C H4P35_11720 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_11725 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H4P35_11730 PF07729 FCD domain H4P35_11730 PF00392 Bacterial regulatory proteins, gntR family H4P35_11735 PF00266 Aminotransferase class-V H4P35_11745 PF00248 Aldo/keto reductase family H4P35_11755 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H4P35_11755 PF00529 HlyD membrane-fusion protein of T1SS H4P35_11760 PF00873 AcrB/AcrD/AcrF family H4P35_11765 PF02321 Outer membrane efflux protein H4P35_11770 PF00083 Sugar (and other) transporter H4P35_11775 PF00732 GMC oxidoreductase H4P35_11775 PF05199 GMC oxidoreductase H4P35_11780 PF09339 IclR helix-turn-helix domain H4P35_11780 PF01614 Bacterial transcriptional regulator H4P35_11795 PF02627 Carboxymuconolactone decarboxylase family H4P35_11810 PF03737 Aldolase/RraA H4P35_11815 PF00155 Aminotransferase class I and II H4P35_11820 PF00497 Bacterial extracellular solute-binding proteins, family 3 H4P35_11825 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_11830 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_11835 PF00005 ABC transporter H4P35_11850 PF02811 PHP domain H4P35_11850 PF14579 Helix-hairpin-helix motif H4P35_11850 PF17657 Bacterial DNA polymerase III alpha subunit finger domain H4P35_11850 PF07733 Bacterial DNA polymerase III alpha NTPase domain H4P35_11865 PF02230 Phospholipase/Carboxylesterase H4P35_11880 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_11885 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain H4P35_11885 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain H4P35_11885 PF00205 Thiamine pyrophosphate enzyme, central domain H4P35_11895 PF02321 Outer membrane efflux protein H4P35_11900 PF00529 HlyD membrane-fusion protein of T1SS H4P35_11900 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H4P35_11905 PF07869 Protein of unknown function (DUF1656) H4P35_11920 PF01242 6-pyruvoyl tetrahydropterin synthase H4P35_11930 PF00472 RF-1 domain H4P35_11945 PF00724 NADH:flavin oxidoreductase / NADH oxidase family H4P35_11985 PF02321 Outer membrane efflux protein H4P35_11995 PF00005 ABC transporter H4P35_12005 PF13977 BetI-type transcriptional repressor, C-terminal H4P35_12005 PF00440 Bacterial regulatory proteins, tetR family H4P35_12010 PF16884 N-terminal domain of oxidoreductase H4P35_12010 PF00107 Zinc-binding dehydrogenase H4P35_12015 PF01965 DJ-1/PfpI family H4P35_12020 PF00072 Response regulator receiver domain H4P35_12025 PF01266 FAD dependent oxidoreductase H4P35_12025 PF16901 C-terminal domain of alpha-glycerophosphate oxidase H4P35_12030 PF08220 DeoR-like helix-turn-helix domain H4P35_12030 PF00455 DeoR C terminal sensor domain H4P35_12035 PF00005 ABC transporter H4P35_12035 PF17912 MalK OB fold domain H4P35_12040 PF00005 ABC transporter H4P35_12040 PF17912 MalK OB fold domain H4P35_12040 PF03459 TOBE domain H4P35_12045 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_12050 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_12070 PF13185 GAF domain H4P35_12070 PF00990 Diguanylate cyclase, GGDEF domain H4P35_12075 PF13192 Thioredoxin domain H4P35_12075 PF07992 Pyridine nucleotide-disulphide oxidoreductase H4P35_12085 PF00723 Glycosyl hydrolases family 15 H4P35_12090 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H4P35_12090 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H4P35_12090 PF02770 Acyl-CoA dehydrogenase, middle domain H4P35_12120 PF01037 Lrp/AsnC ligand binding domain H4P35_12125 PF01266 FAD dependent oxidoreductase H4P35_12130 PF00149 Calcineurin-like phosphoesterase H4P35_12130 PF12320 Type 5 capsule protein repressor C-terminal domain H4P35_12150 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_12155 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus H4P35_12155 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter H4P35_12155 PF00361 Proton-conducting membrane transporter H4P35_12155 PF13244 Domain of unknown function (DUF4040) H4P35_12160 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L H4P35_12165 PF00361 Proton-conducting membrane transporter H4P35_12170 PF01899 Na+/H+ ion antiporter subunit H4P35_12175 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) H4P35_12180 PF03334 Na+/H+ antiporter subunit H4P35_12195 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region H4P35_12200 PF02016 LD-carboxypeptidase N-terminal domain H4P35_12200 PF17676 LD-carboxypeptidase C-terminal domain H4P35_12205 PF00005 ABC transporter H4P35_12205 PF12848 ABC transporter H4P35_12210 PF07690 Major Facilitator Superfamily H4P35_12215 PF00005 ABC transporter H4P35_12235 PF01205 Uncharacterized protein family UPF0029 H4P35_12240 PF00085 Thioredoxin H4P35_12245 PF00296 Luciferase-like monooxygenase H4P35_12255 PF00860 Permease family H4P35_12260 PF00814 Glycoprotease family H4P35_12265 PF02660 Glycerol-3-phosphate acyltransferase H4P35_12270 PF01975 Survival protein SurE H4P35_12280 PF01551 Peptidase family M23 H4P35_12280 PF01476 LysM domain H4P35_12300 PF05958 tRNA (Uracil-5-)-methyltransferase H4P35_12305 PF09278 MerR, DNA binding H4P35_12305 PF00376 MerR family regulatory protein H4P35_12310 PF00403 Heavy-metal-associated domain H4P35_12320 PF08534 Redoxin H4P35_12320 PF00462 Glutaredoxin H4P35_12325 PF07992 Pyridine nucleotide-disulphide oxidoreductase H4P35_12325 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H4P35_12330 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ H4P35_12335 PF03009 Glycerophosphoryl diester phosphodiesterase family H4P35_12340 PF07687 Peptidase dimerisation domain H4P35_12340 PF01546 Peptidase family M20/M25/M40 H4P35_12345 PF13145 PPIC-type PPIASE domain H4P35_12350 PF13472 GDSL-like Lipase/Acylhydrolase family H4P35_12355 PF00005 ABC transporter H4P35_12360 PF12241 Trans-2-enoyl-CoA reductase catalytic region H4P35_12360 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase H4P35_12360 PF07055 Enoyl reductase FAD binding domain H4P35_12370 PF03466 LysR substrate binding domain H4P35_12370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_12385 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component H4P35_12395 PF01425 Amidase H4P35_12400 PF07286 Protein of unknown function (DUF1445) H4P35_12410 PF13609 Gram-negative porin H4P35_12415 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component H4P35_12430 PF00293 NUDIX domain H4P35_12430 PF09297 NADH pyrophosphatase zinc ribbon domain H4P35_12430 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain H4P35_12440 PF05378 Hydantoinase/oxoprolinase N-terminal region H4P35_12440 PF01968 Hydantoinase/oxoprolinase H4P35_12450 PF00497 Bacterial extracellular solute-binding proteins, family 3 H4P35_12455 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_12460 PF00005 ABC transporter H4P35_12465 PF13291 ACT domain H4P35_12465 PF04607 Region found in RelA / SpoT proteins H4P35_12465 PF02824 TGS domain H4P35_12470 PF01192 RNA polymerase Rpb6 H4P35_12475 PF00625 Guanylate kinase H4P35_12485 PF00877 NlpC/P60 family H4P35_12490 PF01048 Phosphorylase superfamily H4P35_12490 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus H4P35_12495 PF00324 Amino acid permease H4P35_12500 PF03755 YicC-like family, N-terminal region H4P35_12500 PF08340 Domain of unknown function (DUF1732) H4P35_12505 PF03725 3' exoribonuclease family, domain 2 H4P35_12505 PF01138 3' exoribonuclease family, domain 1 H4P35_12515 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H4P35_12515 PF02770 Acyl-CoA dehydrogenase, middle domain H4P35_12515 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H4P35_12525 PF12792 CSS motif domain associated with EAL H4P35_12525 PF00563 EAL domain H4P35_12530 PF01725 Ham1 family H4P35_12535 PF04055 Radical SAM superfamily H4P35_12535 PF06969 HemN C-terminal domain H4P35_12540 PF00120 Glutamine synthetase, catalytic domain H4P35_12540 PF03951 Glutamine synthetase, beta-Grasp domain H4P35_12545 PF00512 His Kinase A (phospho-acceptor) domain H4P35_12545 PF00989 PAS fold H4P35_12545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4P35_12550 PF02954 Bacterial regulatory protein, Fis family H4P35_12550 PF00072 Response regulator receiver domain H4P35_12550 PF00158 Sigma-54 interaction domain H4P35_12555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_12555 PF03466 LysR substrate binding domain H4P35_12560 PF17954 Quercetinase C-terminal cupin domain H4P35_12560 PF02678 Pirin H4P35_12565 PF05726 Pirin C-terminal cupin domain H4P35_12565 PF02678 Pirin H4P35_12575 PF00561 alpha/beta hydrolase fold H4P35_12580 PF03466 LysR substrate binding domain H4P35_12580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_12595 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_12600 PF00005 ABC transporter H4P35_12600 PF08402 TOBE domain H4P35_12605 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_12610 PF13416 Bacterial extracellular solute-binding protein H4P35_12615 PF00970 Oxidoreductase FAD-binding domain H4P35_12615 PF00175 Oxidoreductase NAD-binding domain H4P35_12620 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_12635 PF03466 LysR substrate binding domain H4P35_12635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_12640 PF01042 Endoribonuclease L-PSP H4P35_12645 PF00270 DEAD/DEAH box helicase H4P35_12645 PF00271 Helicase conserved C-terminal domain H4P35_12645 PF17191 RecG wedge domain H4P35_12650 PF03466 LysR substrate binding domain H4P35_12650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_12655 PF00210 Ferritin-like domain H4P35_12665 PF13458 Periplasmic binding protein H4P35_12670 PF00005 ABC transporter H4P35_12670 PF17912 MalK OB fold domain H4P35_12675 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_12680 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_12685 PF13416 Bacterial extracellular solute-binding protein H4P35_12690 PF02592 Putative vitamin uptake transporter H4P35_12695 PF13458 Periplasmic binding protein H4P35_12700 PF02653 Branched-chain amino acid transport system / permease component H4P35_12705 PF02653 Branched-chain amino acid transport system / permease component H4P35_12705 PF11862 Domain of unknown function (DUF3382) H4P35_12710 PF00005 ABC transporter H4P35_12710 PF12399 Branched-chain amino acid ATP-binding cassette transporter H4P35_12715 PF00005 ABC transporter H4P35_12720 PF01177 Asp/Glu/Hydantoin racemase H4P35_12725 PF07969 Amidohydrolase family H4P35_12730 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_12735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_12735 PF03466 LysR substrate binding domain H4P35_12740 PF00043 Glutathione S-transferase, C-terminal domain H4P35_12740 PF02798 Glutathione S-transferase, N-terminal domain H4P35_12745 PF07995 Glucose / Sorbosone dehydrogenase H4P35_12755 PF00892 EamA-like transporter family H4P35_12760 PF04241 Protein of unknown function (DUF423) H4P35_12770 PF08808 RES domain H4P35_12775 PF00107 Zinc-binding dehydrogenase H4P35_12775 PF08240 Alcohol dehydrogenase GroES-like domain H4P35_12785 PF01614 Bacterial transcriptional regulator H4P35_12785 PF09339 IclR helix-turn-helix domain H4P35_12790 PF00491 Arginase family H4P35_12795 PF00202 Aminotransferase class-III H4P35_12800 PF03180 NLPA lipoprotein H4P35_12810 PF00149 Calcineurin-like phosphoesterase H4P35_12815 PF01070 FMN-dependent dehydrogenase H4P35_12820 PF02666 Phosphatidylserine decarboxylase H4P35_12825 PF12848 ABC transporter H4P35_12825 PF00005 ABC transporter H4P35_12830 PF03328 HpcH/HpaI aldolase/citrate lyase family H4P35_12835 PF00072 Response regulator receiver domain H4P35_12835 PF00486 Transcriptional regulatory protein, C terminal H4P35_12845 PF00793 DAHP synthetase I family H4P35_12850 PF01590 GAF domain H4P35_12850 PF00990 Diguanylate cyclase, GGDEF domain H4P35_12850 PF00563 EAL domain H4P35_12850 PF00989 PAS fold H4P35_12865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_12865 PF03466 LysR substrate binding domain H4P35_12870 PF07690 Major Facilitator Superfamily H4P35_12875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4P35_12875 PF13426 PAS domain H4P35_12875 PF00072 Response regulator receiver domain H4P35_12885 PF04963 Sigma-54 factor, core binding domain H4P35_12885 PF04552 Sigma-54, DNA binding domain H4P35_12885 PF00309 Sigma-54 factor, Activator interacting domain (AID) H4P35_12890 PF00072 Response regulator receiver domain H4P35_12890 PF00158 Sigma-54 interaction domain H4P35_12890 PF02954 Bacterial regulatory protein, Fis family H4P35_12895 PF02954 Bacterial regulatory protein, Fis family H4P35_12895 PF00072 Response regulator receiver domain H4P35_12895 PF00158 Sigma-54 interaction domain H4P35_12910 PF04070 Domain of unknown function (DUF378) H4P35_12965 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain H4P35_12965 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H4P35_12975 PF12805 FUSC-like inner membrane protein yccS H4P35_12980 PF17154 Gammaproteobacterial periplasmic sensor domain H4P35_12980 PF00672 HAMP domain H4P35_12980 PF00563 EAL domain H4P35_12980 PF00990 Diguanylate cyclase, GGDEF domain H4P35_12990 PF00128 Alpha amylase, catalytic domain H4P35_12995 PF02446 4-alpha-glucanotransferase H4P35_13000 PF11941 Domain of unknown function (DUF3459) H4P35_13000 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) H4P35_13000 PF00128 Alpha amylase, catalytic domain H4P35_13005 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) H4P35_13005 PF00128 Alpha amylase, catalytic domain H4P35_13010 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) H4P35_13010 PF02806 Alpha amylase, C-terminal all-beta domain H4P35_13010 PF00128 Alpha amylase, catalytic domain H4P35_13015 PF16657 Maltogenic Amylase, C-terminal domain H4P35_13015 PF00128 Alpha amylase, catalytic domain H4P35_13020 PF11896 Domain of unknown function (DUF3416) H4P35_13020 PF00128 Alpha amylase, catalytic domain H4P35_13025 PF08323 Starch synthase catalytic domain H4P35_13025 PF00534 Glycosyl transferases group 1 H4P35_13030 PF00205 Thiamine pyrophosphate enzyme, central domain H4P35_13030 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain H4P35_13030 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain H4P35_13075 PF13091 PLD-like domain H4P35_13080 PF03372 Endonuclease/Exonuclease/phosphatase family H4P35_13085 PF01740 STAS domain H4P35_13085 PF00916 Sulfate permease family H4P35_13090 PF00034 Cytochrome c H4P35_13095 PF05199 GMC oxidoreductase H4P35_13095 PF00732 GMC oxidoreductase H4P35_13100 PF13618 Gluconate 2-dehydrogenase subunit 3 H4P35_13110 PF03741 Integral membrane protein TerC family H4P35_13110 PF03471 Transporter associated domain H4P35_13120 PF02525 Flavodoxin-like fold H4P35_13130 PF00155 Aminotransferase class I and II H4P35_13130 PF00392 Bacterial regulatory proteins, gntR family H4P35_13145 PF00378 Enoyl-CoA hydratase/isomerase H4P35_13150 PF07690 Major Facilitator Superfamily H4P35_13160 PF01970 Tripartite tricarboxylate transporter TctA family H4P35_13175 PF00440 Bacterial regulatory proteins, tetR family H4P35_13175 PF16925 Tetracyclin repressor-like, C-terminal domain H4P35_13185 PF00990 Diguanylate cyclase, GGDEF domain H4P35_13190 PF00072 Response regulator receiver domain H4P35_13190 PF00990 Diguanylate cyclase, GGDEF domain H4P35_13200 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain H4P35_13200 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain H4P35_13200 PF00205 Thiamine pyrophosphate enzyme, central domain H4P35_13210 PF00196 Bacterial regulatory proteins, luxR family H4P35_13210 PF00072 Response regulator receiver domain H4P35_13215 PF09456 RcsC Alpha-Beta-Loop (ABL) H4P35_13215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4P35_13215 PF00512 His Kinase A (phospho-acceptor) domain H4P35_13215 PF00072 Response regulator receiver domain H4P35_13220 PF00563 EAL domain H4P35_13220 PF12792 CSS motif domain associated with EAL H4P35_13225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4P35_13225 PF00512 His Kinase A (phospho-acceptor) domain H4P35_13225 PF09456 RcsC Alpha-Beta-Loop (ABL) H4P35_13225 PF00072 Response regulator receiver domain H4P35_13240 PF01594 AI-2E family transporter H4P35_13245 PF00849 RNA pseudouridylate synthase H4P35_13245 PF01479 S4 domain H4P35_13250 PF17676 LD-carboxypeptidase C-terminal domain H4P35_13250 PF02016 LD-carboxypeptidase N-terminal domain H4P35_13265 PF02082 Transcriptional regulator H4P35_13275 PF13520 Amino acid permease H4P35_13295 PF00884 Sulfatase H4P35_13310 PF03781 Sulfatase-modifying factor enzyme 1 H4P35_13320 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus H4P35_13320 PF00561 alpha/beta hydrolase fold H4P35_13330 PF13545 Crp-like helix-turn-helix domain H4P35_13330 PF00027 Cyclic nucleotide-binding domain H4P35_13335 PF00072 Response regulator receiver domain H4P35_13335 PF00196 Bacterial regulatory proteins, luxR family H4P35_13340 PF07730 Histidine kinase H4P35_13340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4P35_13340 PF05231 MASE1 H4P35_13350 PF00571 CBS domain H4P35_13355 PF10996 Beta-Casp domain H4P35_13355 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain H4P35_13355 PF00753 Metallo-beta-lactamase superfamily H4P35_13360 PF00582 Universal stress protein family H4P35_13370 PF00582 Universal stress protein family H4P35_13375 PF08240 Alcohol dehydrogenase GroES-like domain H4P35_13380 PF00317 Ribonucleotide reductase, all-alpha domain H4P35_13380 PF03477 ATP cone domain H4P35_13380 PF02867 Ribonucleotide reductase, barrel domain H4P35_13385 PF00582 Universal stress protein family H4P35_13390 PF03358 NADPH-dependent FMN reductase H4P35_13395 PF03960 ArsC family H4P35_13400 PF01758 Sodium Bile acid symporter family H4P35_13405 PF01451 Low molecular weight phosphotyrosine protein phosphatase H4P35_13415 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_13430 PF01011 PQQ enzyme repeat H4P35_13430 PF13360 PQQ-like domain H4P35_13435 PF00925 GTP cyclohydrolase II H4P35_13445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4P35_13445 PF00512 His Kinase A (phospho-acceptor) domain H4P35_13450 PF00072 Response regulator receiver domain H4P35_13450 PF00486 Transcriptional regulatory protein, C terminal H4P35_13470 PF00484 Carbonic anhydrase H4P35_13475 PF08241 Methyltransferase domain H4P35_13480 PF00171 Aldehyde dehydrogenase family H4P35_13490 PF00149 Calcineurin-like phosphoesterase H4P35_13500 PF01292 Prokaryotic cytochrome b561 H4P35_13505 PF13298 DNA polymerase Ligase (LigD) H4P35_13505 PF01068 ATP dependent DNA ligase domain H4P35_13505 PF04679 ATP dependent DNA ligase C terminal region H4P35_13510 PF02735 Ku70/Ku80 beta-barrel domain H4P35_13530 PF03976 Polyphosphate kinase 2 (PPK2) H4P35_13545 PF00593 TonB dependent receptor H4P35_13545 PF07715 TonB-dependent Receptor Plug Domain H4P35_13585 PF01297 Zinc-uptake complex component A periplasmic H4P35_13590 PF00005 ABC transporter H4P35_13595 PF00950 ABC 3 transport family H4P35_13605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_13605 PF03466 LysR substrate binding domain H4P35_13610 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_13615 PF08666 SAF domain H4P35_13615 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus H4P35_13620 PF03328 HpcH/HpaI aldolase/citrate lyase family H4P35_13655 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_13660 PF08450 SMP-30/Gluconolactonase/LRE-like region H4P35_13665 PF08666 SAF domain H4P35_13665 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus H4P35_13670 PF00701 Dihydrodipicolinate synthetase family H4P35_13675 PF00171 Aldehyde dehydrogenase family H4P35_13680 PF03466 LysR substrate binding domain H4P35_13680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_13690 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_13695 PF00701 Dihydrodipicolinate synthetase family H4P35_13700 PF00392 Bacterial regulatory proteins, gntR family H4P35_13705 PF00497 Bacterial extracellular solute-binding proteins, family 3 H4P35_13710 PF00155 Aminotransferase class I and II H4P35_13715 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_13720 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_13725 PF00005 ABC transporter H4P35_13730 PF13609 Gram-negative porin H4P35_13740 PF00512 His Kinase A (phospho-acceptor) domain H4P35_13740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4P35_13745 PF00072 Response regulator receiver domain H4P35_13745 PF00486 Transcriptional regulatory protein, C terminal H4P35_13755 PF01032 FecCD transport family H4P35_13760 PF00127 Copper binding proteins, plastocyanin/azurin family H4P35_13765 PF00005 ABC transporter H4P35_13775 PF00585 C-terminal regulatory domain of Threonine dehydratase H4P35_13775 PF00291 Pyridoxal-phosphate dependent enzyme H4P35_13780 PF03971 Monomeric isocitrate dehydrogenase H4P35_13790 PF01381 Helix-turn-helix H4P35_13790 PF00145 C-5 cytosine-specific DNA methylase H4P35_13795 PF03649 Uncharacterised protein family (UPF0014) H4P35_13800 PF00005 ABC transporter H4P35_13825 PF00005 ABC transporter H4P35_13830 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_13835 PF00497 Bacterial extracellular solute-binding proteins, family 3 H4P35_13865 PF08534 Redoxin H4P35_13870 PF01070 FMN-dependent dehydrogenase H4P35_13880 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H4P35_13880 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain H4P35_13880 PF01842 ACT domain H4P35_13885 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_13890 PF01118 Semialdehyde dehydrogenase, NAD binding domain H4P35_13895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_13895 PF03466 LysR substrate binding domain H4P35_13900 PF00654 Voltage gated chloride channel H4P35_13915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4P35_13915 PF00989 PAS fold H4P35_13915 PF00512 His Kinase A (phospho-acceptor) domain H4P35_13920 PF00196 Bacterial regulatory proteins, luxR family H4P35_13920 PF00072 Response regulator receiver domain H4P35_13935 PF13462 Thioredoxin H4P35_13935 PF06965 Na+/H+ antiporter 1 H4P35_13940 PF00578 AhpC/TSA family H4P35_13945 PF00210 Ferritin-like domain H4P35_13950 PF13493 Domain of unknown function (DUF4118) H4P35_13950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4P35_13950 PF13426 PAS domain H4P35_13950 PF00512 His Kinase A (phospho-acceptor) domain H4P35_13950 PF00989 PAS fold H4P35_13950 PF08447 PAS fold H4P35_13955 PF00072 Response regulator receiver domain H4P35_13955 PF00196 Bacterial regulatory proteins, luxR family H4P35_13960 PF00196 Bacterial regulatory proteins, luxR family H4P35_13960 PF00072 Response regulator receiver domain H4P35_13965 PF00561 alpha/beta hydrolase fold H4P35_13995 PF07690 Major Facilitator Superfamily H4P35_14010 PF00857 Isochorismatase family H4P35_14025 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_14030 PF07992 Pyridine nucleotide-disulphide oxidoreductase H4P35_14045 PF00376 MerR family regulatory protein H4P35_14045 PF09278 MerR, DNA binding H4P35_14050 PF00916 Sulfate permease family H4P35_14050 PF01740 STAS domain H4P35_14080 PF12464 Maltose acetyltransferase H4P35_14080 PF14602 Hexapeptide repeat of succinyl-transferase H4P35_14090 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H4P35_14090 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain H4P35_14095 PF01557 Fumarylacetoacetate (FAA) hydrolase family H4P35_14105 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_14115 PF00990 Diguanylate cyclase, GGDEF domain H4P35_14115 PF07694 5TMR of 5TMR-LYT H4P35_14125 PF02567 Phenazine biosynthesis-like protein H4P35_14130 PF08946 Osmosensory transporter coiled coil H4P35_14130 PF00083 Sugar (and other) transporter H4P35_14140 PF01042 Endoribonuclease L-PSP H4P35_14145 PF03466 LysR substrate binding domain H4P35_14145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_14150 PF03466 LysR substrate binding domain H4P35_14150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_14155 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_14165 PF01965 DJ-1/PfpI family H4P35_14170 PF07995 Glucose / Sorbosone dehydrogenase H4P35_14190 PF07715 TonB-dependent Receptor Plug Domain H4P35_14190 PF00593 TonB dependent receptor H4P35_14220 PF00034 Cytochrome c H4P35_14220 PF00116 Cytochrome C oxidase subunit II, periplasmic domain H4P35_14220 PF02790 Cytochrome C oxidase subunit II, transmembrane domain H4P35_14225 PF00115 Cytochrome C and Quinol oxidase polypeptide I H4P35_14240 PF02525 Flavodoxin-like fold H4P35_14250 PF01209 ubiE/COQ5 methyltransferase family H4P35_14255 PF13419 Haloacid dehalogenase-like hydrolase H4P35_14260 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_14265 PF03737 Aldolase/RraA H4P35_14270 PF00920 Dehydratase family H4P35_14275 PF00392 Bacterial regulatory proteins, gntR family H4P35_14275 PF07729 FCD domain H4P35_14290 PF01053 Cys/Met metabolism PLP-dependent enzyme H4P35_14295 PF00266 Aminotransferase class-V H4P35_14300 PF00497 Bacterial extracellular solute-binding proteins, family 3 H4P35_14305 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_14310 PF02036 SCP-2 sterol transfer family H4P35_14315 PF01136 Peptidase family U32 H4P35_14320 PF01136 Peptidase family U32 H4P35_14325 PF00072 Response regulator receiver domain H4P35_14325 PF00196 Bacterial regulatory proteins, luxR family H4P35_14330 PF00672 HAMP domain H4P35_14330 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term H4P35_14330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4P35_14330 PF07730 Histidine kinase H4P35_14335 PF03205 Molybdopterin guanine dinucleotide synthesis protein B H4P35_14340 PF00484 Carbonic anhydrase H4P35_14345 PF04055 Radical SAM superfamily H4P35_14345 PF06463 Molybdenum Cofactor Synthesis C H4P35_14350 PF00639 PPIC-type PPIASE domain H4P35_14350 PF09312 SurA N-terminal domain H4P35_14355 PF02665 Nitrate reductase gamma subunit H4P35_14360 PF02613 Nitrate reductase delta subunit H4P35_14365 PF14711 Respiratory nitrate reductase beta C-terminal H4P35_14365 PF13247 4Fe-4S dicluster domain H4P35_14370 PF14710 Respiratory nitrate reductase alpha N-terminal H4P35_14370 PF01568 Molydopterin dinucleotide binding domain H4P35_14370 PF00384 Molybdopterin oxidoreductase H4P35_14375 PF07690 Major Facilitator Superfamily H4P35_14380 PF07690 Major Facilitator Superfamily H4P35_14395 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H4P35_14400 PF00873 AcrB/AcrD/AcrF family H4P35_14405 PF00873 AcrB/AcrD/AcrF family H4P35_14410 PF02321 Outer membrane efflux protein H4P35_14415 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H4P35_14415 PF00529 HlyD membrane-fusion protein of T1SS H4P35_14430 PF03466 LysR substrate binding domain H4P35_14430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_14435 PF01546 Peptidase family M20/M25/M40 H4P35_14435 PF07687 Peptidase dimerisation domain H4P35_14440 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_14450 PF18011 C-terminal domain found in long catalases H4P35_14450 PF06628 Catalase-related immune-responsive H4P35_14450 PF00199 Catalase H4P35_14465 PF13597 Anaerobic ribonucleoside-triphosphate reductase H4P35_14465 PF03477 ATP cone domain H4P35_14480 PF00155 Aminotransferase class I and II H4P35_14480 PF00392 Bacterial regulatory proteins, gntR family H4P35_14485 PF00368 Hydroxymethylglutaryl-coenzyme A reductase H4P35_14500 PF03060 Nitronate monooxygenase H4P35_14505 PF13419 Haloacid dehalogenase-like hydrolase H4P35_14515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_14515 PF03466 LysR substrate binding domain H4P35_14525 PF03466 LysR substrate binding domain H4P35_14525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_14540 PF01047 MarR family H4P35_14550 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component H4P35_14560 PF03480 Bacterial extracellular solute-binding protein, family 7 H4P35_14565 PF01425 Amidase H4P35_14570 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_14575 PF00291 Pyridoxal-phosphate dependent enzyme H4P35_14580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_14580 PF03466 LysR substrate binding domain H4P35_14585 PF07715 TonB-dependent Receptor Plug Domain H4P35_14585 PF00593 TonB dependent receptor H4P35_14615 PF00691 OmpA family H4P35_14615 PF13488 Glycine zipper H4P35_14630 PF00557 Metallopeptidase family M24 H4P35_14635 PF07690 Major Facilitator Superfamily H4P35_14645 PF13439 Glycosyltransferase Family 4 H4P35_14645 PF00534 Glycosyl transferases group 1 H4P35_14655 PF00512 His Kinase A (phospho-acceptor) domain H4P35_14655 PF00672 HAMP domain H4P35_14655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4P35_14660 PF00486 Transcriptional regulatory protein, C terminal H4P35_14660 PF00072 Response regulator receiver domain H4P35_14665 PF06610 L-alanine exporter H4P35_14670 PF13417 Glutathione S-transferase, N-terminal domain H4P35_14670 PF00043 Glutathione S-transferase, C-terminal domain H4P35_14675 PF00080 Copper/zinc superoxide dismutase (SODC) H4P35_14680 PF04286 Protein of unknown function (DUF445) H4P35_14685 PF01594 AI-2E family transporter H4P35_14690 PF03466 LysR substrate binding domain H4P35_14690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_14695 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain H4P35_14695 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain H4P35_14695 PF00378 Enoyl-CoA hydratase/isomerase H4P35_14700 PF00108 Thiolase, N-terminal domain H4P35_14700 PF02803 Thiolase, C-terminal domain H4P35_14705 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H4P35_14705 PF02770 Acyl-CoA dehydrogenase, middle domain H4P35_14705 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H4P35_14710 PF02770 Acyl-CoA dehydrogenase, middle domain H4P35_14710 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H4P35_14710 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H4P35_14715 PF13193 AMP-binding enzyme C-terminal domain H4P35_14715 PF00501 AMP-binding enzyme H4P35_14720 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_14735 PF07690 Major Facilitator Superfamily H4P35_14740 PF01053 Cys/Met metabolism PLP-dependent enzyme H4P35_14745 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain H4P35_14745 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain H4P35_14755 PF03466 LysR substrate binding domain H4P35_14755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_14765 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_14780 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_14785 PF03737 Aldolase/RraA H4P35_14790 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H4P35_14790 PF01842 ACT domain H4P35_14790 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain H4P35_14795 PF07729 FCD domain H4P35_14795 PF00392 Bacterial regulatory proteins, gntR family H4P35_14800 PF00563 EAL domain H4P35_14800 PF01590 GAF domain H4P35_14800 PF00990 Diguanylate cyclase, GGDEF domain H4P35_14800 PF00360 Phytochrome region H4P35_14805 PF00072 Response regulator receiver domain H4P35_14805 PF01339 CheB methylesterase H4P35_14810 PF01627 Hpt domain H4P35_14810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4P35_14810 PF01584 CheW-like domain H4P35_14810 PF00072 Response regulator receiver domain H4P35_14820 PF01739 CheR methyltransferase, SAM binding domain H4P35_14825 PF01584 CheW-like domain H4P35_14830 PF12729 Four helix bundle sensory module for signal transduction H4P35_14830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H4P35_14830 PF00672 HAMP domain H4P35_14835 PF01425 Amidase H4P35_14850 PF18081 Fanconi anemia-associated nuclease SAP domain H4P35_14850 PF08774 VRR-NUC domain H4P35_14855 PF13442 Cytochrome C oxidase, cbb3-type, subunit III H4P35_14855 PF00034 Cytochrome c H4P35_14860 PF05199 GMC oxidoreductase H4P35_14860 PF00732 GMC oxidoreductase H4P35_14865 PF13618 Gluconate 2-dehydrogenase subunit 3 H4P35_14885 PF01909 Nucleotidyltransferase domain H4P35_14885 PF13427 Domain of unknown function (DUF4111) H4P35_14905 PF02540 NAD synthase H4P35_14905 PF00958 GMP synthase C terminal domain H4P35_14905 PF00117 Glutamine amidotransferase class-I H4P35_14910 PF00478 IMP dehydrogenase / GMP reductase domain H4P35_14910 PF00571 CBS domain H4P35_14945 PF03466 LysR substrate binding domain H4P35_14945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_14950 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_14955 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain H4P35_14955 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H4P35_14980 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_14985 PF03466 LysR substrate binding domain H4P35_14985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_14990 PF13454 FAD-NAD(P)-binding H4P35_14995 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_15000 PF12911 N-terminal TM domain of oligopeptide transport permease C H4P35_15000 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_15005 PF00005 ABC transporter H4P35_15005 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H4P35_15010 PF00005 ABC transporter H4P35_15010 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H4P35_15015 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H4P35_15040 PF04055 Radical SAM superfamily H4P35_15050 PF01613 Flavin reductase like domain H4P35_15055 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_15060 PF01042 Endoribonuclease L-PSP H4P35_15065 PF04909 Amidohydrolase H4P35_15070 PF01557 Fumarylacetoacetate (FAA) hydrolase family H4P35_15075 PF01557 Fumarylacetoacetate (FAA) hydrolase family H4P35_15080 PF03328 HpcH/HpaI aldolase/citrate lyase family H4P35_15110 PF16884 N-terminal domain of oxidoreductase H4P35_15110 PF00107 Zinc-binding dehydrogenase H4P35_15115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_15115 PF03466 LysR substrate binding domain H4P35_15160 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) H4P35_15175 PF04264 YceI-like domain H4P35_15185 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_15200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_15200 PF03466 LysR substrate binding domain H4P35_15210 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_15215 PF00672 HAMP domain H4P35_15215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H4P35_15215 PF02203 Tar ligand binding domain homologue H4P35_15220 PF02769 AIR synthase related protein, C-terminal domain H4P35_15220 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain H4P35_15220 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal H4P35_15230 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component H4P35_15230 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component H4P35_15235 PF03480 Bacterial extracellular solute-binding protein, family 7 H4P35_15240 PF03449 Transcription elongation factor, N-terminal H4P35_15240 PF01272 Transcription elongation factor, GreA/GreB, C-term H4P35_15245 PF02811 PHP domain H4P35_15260 PF00732 GMC oxidoreductase H4P35_15260 PF05199 GMC oxidoreductase H4P35_15265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_15265 PF03466 LysR substrate binding domain H4P35_15270 PF04324 BFD-like [2Fe-2S] binding domain H4P35_15270 PF01077 Nitrite and sulphite reductase 4Fe-4S domain H4P35_15270 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain H4P35_15270 PF07992 Pyridine nucleotide-disulphide oxidoreductase H4P35_15270 PF13806 Rieske-like [2Fe-2S] domain H4P35_15270 PF18267 Rubredoxin NAD+ reductase C-terminal domain H4P35_15280 PF01226 Formate/nitrite transporter H4P35_15285 PF03793 PASTA domain H4P35_15285 PF00069 Protein kinase domain H4P35_15290 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases H4P35_15295 PF08376 Nitrate and nitrite sensing H4P35_15295 PF03861 ANTAR domain H4P35_15305 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H4P35_15305 PF00529 HlyD membrane-fusion protein of T1SS H4P35_15310 PF02321 Outer membrane efflux protein H4P35_15315 PF01047 MarR family H4P35_15325 PF08241 Methyltransferase domain H4P35_15330 PF00356 Bacterial regulatory proteins, lacI family H4P35_15335 PF03480 Bacterial extracellular solute-binding protein, family 7 H4P35_15340 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component H4P35_15350 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain H4P35_15350 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain H4P35_15355 PF17042 Nucleotide-binding C-terminal domain H4P35_15355 PF07005 Sugar-binding N-terminal domain H4P35_15360 PF00753 Metallo-beta-lactamase superfamily H4P35_15360 PF03772 Competence protein H4P35_15365 PF00106 short chain dehydrogenase H4P35_15370 PF00106 short chain dehydrogenase H4P35_15375 PF01965 DJ-1/PfpI family H4P35_15385 PF02311 AraC-like ligand binding domain H4P35_15385 PF12833 Helix-turn-helix domain H4P35_15390 PF03466 LysR substrate binding domain H4P35_15390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_15395 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_15410 PF00182 Chitinase class I H4P35_15415 PF11008 Protein of unknown function (DUF2846) H4P35_15420 PF02110 Hydroxyethylthiazole kinase family H4P35_15425 PF00149 Calcineurin-like phosphoesterase H4P35_15425 PF02872 5'-nucleotidase, C-terminal domain H4P35_15430 PF00005 ABC transporter H4P35_15435 PF01032 FecCD transport family H4P35_15440 PF01032 FecCD transport family H4P35_15445 PF01497 Periplasmic binding protein H4P35_15450 PF07715 TonB-dependent Receptor Plug Domain H4P35_15450 PF00593 TonB dependent receptor H4P35_15455 PF00072 Response regulator receiver domain H4P35_15455 PF00486 Transcriptional regulatory protein, C terminal H4P35_15460 PF16750 Sensor domain of 2-component histidine kinase H4P35_15460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4P35_15460 PF00672 HAMP domain H4P35_15460 PF00512 His Kinase A (phospho-acceptor) domain H4P35_15465 PF01026 TatD related DNase H4P35_15470 PF00005 ABC transporter H4P35_15475 PF02687 FtsX-like permease family H4P35_15475 PF12704 MacB-like periplasmic core domain H4P35_15485 PF01368 DHH family H4P35_15485 PF02272 DHHA1 domain H4P35_15485 PF17768 RecJ OB domain H4P35_15490 PF07690 Major Facilitator Superfamily H4P35_15500 PF00106 short chain dehydrogenase H4P35_15505 PF00152 tRNA synthetases class II (D, K and N) H4P35_15505 PF01336 OB-fold nucleic acid binding domain H4P35_15515 PF00440 Bacterial regulatory proteins, tetR family H4P35_15515 PF17932 Tetracyclin repressor-like, C-terminal domain H4P35_15520 PF00108 Thiolase, N-terminal domain H4P35_15520 PF02803 Thiolase, C-terminal domain H4P35_15525 PF00501 AMP-binding enzyme H4P35_15530 PF00005 ABC transporter H4P35_15540 PF02653 Branched-chain amino acid transport system / permease component H4P35_15550 PF12399 Branched-chain amino acid ATP-binding cassette transporter H4P35_15550 PF00005 ABC transporter H4P35_15555 PF00378 Enoyl-CoA hydratase/isomerase H4P35_15560 PF00378 Enoyl-CoA hydratase/isomerase H4P35_15565 PF02515 CoA-transferase family III H4P35_15570 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_15575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_15575 PF03466 LysR substrate binding domain H4P35_15580 PF02142 MGS-like domain H4P35_15585 PF04384 Iron-sulphur cluster assembly H4P35_15590 PF00111 2Fe-2S iron-sulfur cluster binding domain H4P35_15595 PF00012 Hsp70 protein H4P35_15600 PF07743 HSCB C-terminal oligomerisation domain H4P35_15605 PF01521 Iron-sulphur cluster biosynthesis H4P35_15610 PF01592 NifU-like N terminal domain H4P35_15615 PF00266 Aminotransferase class-V H4P35_15620 PF02082 Transcriptional regulator H4P35_15625 PF01451 Low molecular weight phosphotyrosine protein phosphatase H4P35_15630 PF12344 Ultra-violet resistance protein B H4P35_15630 PF17757 UvrB interaction domain H4P35_15630 PF04851 Type III restriction enzyme, res subunit H4P35_15630 PF02151 UvrB/uvrC motif H4P35_15630 PF00271 Helicase conserved C-terminal domain H4P35_15635 PF00155 Aminotransferase class I and II H4P35_15640 PF01726 LexA DNA binding domain H4P35_15640 PF00717 Peptidase S24-like H4P35_15645 PF00004 ATPase family associated with various cellular activities (AAA) H4P35_15645 PF05362 Lon protease (S16) C-terminal proteolytic domain H4P35_15645 PF02190 ATP-dependent protease La (LON) substrate-binding domain H4P35_15650 PF07724 AAA domain (Cdc48 subfamily) H4P35_15650 PF10431 C-terminal, D2-small domain, of ClpB protein H4P35_15650 PF06689 ClpX C4-type zinc finger H4P35_15655 PF00574 Clp protease H4P35_15660 PF05697 Bacterial trigger factor protein (TF) H4P35_15660 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H4P35_15660 PF05698 Bacterial trigger factor protein (TF) C-terminus H4P35_15665 PF01435 Peptidase family M48 H4P35_15670 PF03350 Uncharacterized protein family, UPF0114 H4P35_15675 PF00313 'Cold-shock' DNA-binding domain H4P35_15685 PF00313 'Cold-shock' DNA-binding domain H4P35_15710 PF01042 Endoribonuclease L-PSP H4P35_15715 PF01168 Alanine racemase, N-terminal domain H4P35_15715 PF14031 Putative serine dehydratase domain H4P35_15720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_15720 PF03466 LysR substrate binding domain H4P35_15740 PF02470 MlaD protein H4P35_15745 PF00583 Acetyltransferase (GNAT) family H4P35_15755 PF00793 DAHP synthetase I family H4P35_15760 PF00230 Major intrinsic protein H4P35_15770 PF04940 Sensors of blue-light using FAD H4P35_15770 PF00563 EAL domain H4P35_15780 PF00155 Aminotransferase class I and II H4P35_15785 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal H4P35_15785 PF14602 Hexapeptide repeat of succinyl-transferase H4P35_15785 PF00132 Bacterial transferase hexapeptide (six repeats) H4P35_15790 PF01546 Peptidase family M20/M25/M40 H4P35_15790 PF07687 Peptidase dimerisation domain H4P35_15795 PF05175 Methyltransferase small domain H4P35_15800 PF00005 ABC transporter H4P35_15800 PF12848 ABC transporter H4P35_15810 PF13361 UvrD-like helicase C-terminal domain H4P35_15810 PF00580 UvrD/REP helicase N-terminal domain H4P35_15830 PF00551 Formyl transferase H4P35_15835 PF01687 Riboflavin kinase H4P35_15835 PF06574 FAD synthetase H4P35_15840 PF06827 Zinc finger found in FPG and IleRS H4P35_15840 PF00133 tRNA synthetases class I (I, L, M and V) H4P35_15840 PF08264 Anticodon-binding domain of tRNA H4P35_15845 PF01252 Signal peptidase (SPase) II H4P35_15850 PF02441 Flavoprotein H4P35_15850 PF04127 DNA / pantothenate metabolism flavoprotein H4P35_15855 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_15870 PF03575 Peptidase family S51 H4P35_15900 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) H4P35_15900 PF13296 Putative type VI secretion system Rhs element Vgr H4P35_15900 PF04717 Type VI secretion system, phage-baseplate injector H4P35_15915 PF03781 Sulfatase-modifying factor enzyme 1 H4P35_15935 PF00724 NADH:flavin oxidoreductase / NADH oxidase family H4P35_15940 PF00005 ABC transporter H4P35_15945 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_15950 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_15955 PF00497 Bacterial extracellular solute-binding proteins, family 3 H4P35_15965 PF02566 OsmC-like protein H4P35_15970 PF01566 Natural resistance-associated macrophage protein H4P35_15985 PF07690 Major Facilitator Superfamily H4P35_15990 PF07729 FCD domain H4P35_15990 PF00392 Bacterial regulatory proteins, gntR family H4P35_15995 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_16000 PF00378 Enoyl-CoA hydratase/isomerase H4P35_16005 PF02515 CoA-transferase family III H4P35_16010 PF00005 ABC transporter H4P35_16015 PF12399 Branched-chain amino acid ATP-binding cassette transporter H4P35_16015 PF00005 ABC transporter H4P35_16020 PF11862 Domain of unknown function (DUF3382) H4P35_16020 PF02653 Branched-chain amino acid transport system / permease component H4P35_16025 PF02653 Branched-chain amino acid transport system / permease component H4P35_16030 PF13458 Periplasmic binding protein H4P35_16035 PF14850 DNA-binding domain of Proline dehydrogenase H4P35_16035 PF00171 Aldehyde dehydrogenase family H4P35_16035 PF01619 Proline dehydrogenase H4P35_16035 PF18327 Proline utilization A proline dehydrogenase N-terminal domain H4P35_16045 PF02470 MlaD protein H4P35_16050 PF04403 Paraquat-inducible protein A H4P35_16055 PF10431 C-terminal, D2-small domain, of ClpB protein H4P35_16055 PF02861 Clp amino terminal domain, pathogenicity island component H4P35_16055 PF17871 AAA lid domain H4P35_16055 PF07724 AAA domain (Cdc48 subfamily) H4P35_16055 PF00004 ATPase family associated with various cellular activities (AAA) H4P35_16060 PF06832 Penicillin-Binding Protein C-terminus Family H4P35_16060 PF00905 Penicillin binding protein transpeptidase domain H4P35_16060 PF00912 Transglycosylase H4P35_16065 PF00207 Alpha-2-macroglobulin family H4P35_16065 PF07703 Alpha-2-macroglobulin bait region domain H4P35_16065 PF01835 MG2 domain H4P35_16065 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain H4P35_16065 PF17962 Bacterial macroglobulin domain 6 H4P35_16065 PF11974 Bacterial alpha-2-macroglobulin MG3 domain H4P35_16065 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain H4P35_16065 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain H4P35_16070 PF02617 ATP-dependent Clp protease adaptor protein ClpS H4P35_16075 PF00313 'Cold-shock' DNA-binding domain H4P35_16085 PF00108 Thiolase, N-terminal domain H4P35_16085 PF02803 Thiolase, C-terminal domain H4P35_16090 PF00654 Voltage gated chloride channel H4P35_16095 PF02203 Tar ligand binding domain homologue H4P35_16095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H4P35_16095 PF00672 HAMP domain H4P35_16105 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain H4P35_16105 PF02777 Iron/manganese superoxide dismutases, C-terminal domain H4P35_16115 PF02601 Exonuclease VII, large subunit H4P35_16115 PF13742 OB-fold nucleic acid binding domain H4P35_16120 PF01618 MotA/TolQ/ExbB proton channel family H4P35_16130 PF02606 Tetraacyldisaccharide-1-P 4'-kinase H4P35_16135 PF03966 Trm112p-like protein H4P35_16140 PF02348 Cytidylyltransferase H4P35_16145 PF05191 Adenylate kinase, active site lid H4P35_16150 PF00106 short chain dehydrogenase H4P35_16155 PF03023 Lipid II flippase MurJ H4P35_16165 PF01649 Ribosomal protein S20 H4P35_16170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_16170 PF03466 LysR substrate binding domain H4P35_16175 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain H4P35_16175 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain H4P35_16180 PF03328 HpcH/HpaI aldolase/citrate lyase family H4P35_16185 PF00920 Dehydratase family H4P35_16195 PF07729 FCD domain H4P35_16195 PF00392 Bacterial regulatory proteins, gntR family H4P35_16205 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_16210 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_16215 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H4P35_16215 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain H4P35_16230 PF18073 Rubredoxin metal binding domain H4P35_16245 PF03328 HpcH/HpaI aldolase/citrate lyase family H4P35_16250 PF07715 TonB-dependent Receptor Plug Domain H4P35_16250 PF00593 TonB dependent receptor H4P35_16255 PF04773 FecR protein H4P35_16255 PF16220 Domain of unknown function (DUF4880) H4P35_16260 PF08281 Sigma-70, region 4 H4P35_16260 PF04542 Sigma-70 region 2 H4P35_16270 PF01168 Alanine racemase, N-terminal domain H4P35_16270 PF00842 Alanine racemase, C-terminal domain H4P35_16290 PF02627 Carboxymuconolactone decarboxylase family H4P35_16295 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_16305 PF02515 CoA-transferase family III H4P35_16310 PF03328 HpcH/HpaI aldolase/citrate lyase family H4P35_16315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_16315 PF03466 LysR substrate binding domain H4P35_16320 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_16325 PF07702 UTRA domain H4P35_16325 PF00392 Bacterial regulatory proteins, gntR family H4P35_16330 PF02537 CrcB-like protein, Camphor Resistance (CrcB) H4P35_16355 PF02424 ApbE family H4P35_16360 PF00667 FAD binding domain H4P35_16360 PF00175 Oxidoreductase NAD-binding domain H4P35_16360 PF00258 Flavodoxin H4P35_16370 PF07969 Amidohydrolase family H4P35_16375 PF03466 LysR substrate binding domain H4P35_16375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_16385 PF09370 Phosphoenolpyruvate hydrolase-like H4P35_16405 PF17871 AAA lid domain H4P35_16405 PF10431 C-terminal, D2-small domain, of ClpB protein H4P35_16405 PF00004 ATPase family associated with various cellular activities (AAA) H4P35_16405 PF07724 AAA domain (Cdc48 subfamily) H4P35_16405 PF02861 Clp amino terminal domain, pathogenicity island component H4P35_16415 PF00027 Cyclic nucleotide-binding domain H4P35_16415 PF13545 Crp-like helix-turn-helix domain H4P35_16450 PF00293 NUDIX domain H4P35_16455 PF00012 Hsp70 protein H4P35_16465 PF12843 Putative quorum-sensing-regulated virulence factor H4P35_16495 PF03069 Acetamidase/Formamidase family H4P35_16530 PF13404 AsnC-type helix-turn-helix domain H4P35_16530 PF01037 Lrp/AsnC ligand binding domain H4P35_16540 PF16326 ABC transporter C-terminal domain H4P35_16540 PF00005 ABC transporter H4P35_16540 PF12848 ABC transporter H4P35_16555 PF04829 Pre-toxin domain with VENN motif H4P35_16555 PF05860 haemagglutination activity domain H4P35_16555 PF13332 Hemagglutinin repeat H4P35_16560 PF00872 Transposase, Mutator family H4P35_16585 PF04829 Pre-toxin domain with VENN motif H4P35_16585 PF13332 Hemagglutinin repeat H4P35_16585 PF05860 haemagglutination activity domain H4P35_16585 PF04829 Pre-toxin domain with VENN motif H4P35_16585 PF13332 Hemagglutinin repeat H4P35_16585 PF05860 haemagglutination activity domain H4P35_16590 PF08479 POTRA domain, ShlB-type H4P35_16590 PF17287 POTRA domain H4P35_16590 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB H4P35_16600 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H4P35_16600 PF00005 ABC transporter H4P35_16605 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H4P35_16610 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_16615 PF12911 N-terminal TM domain of oligopeptide transport permease C H4P35_16615 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_16625 PF13673 Acetyltransferase (GNAT) domain H4P35_16640 PF13406 Transglycosylase SLT domain H4P35_16655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_16655 PF03466 LysR substrate binding domain H4P35_16660 PF00962 Adenosine/AMP deaminase H4P35_16665 PF00135 Carboxylesterase family H4P35_16670 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_16675 PF01958 Domain of unknown function DUF108 H4P35_16675 PF03447 Homoserine dehydrogenase, NAD binding domain H4P35_16680 PF06472 ABC transporter transmembrane region 2 H4P35_16680 PF00005 ABC transporter H4P35_16685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_16685 PF03466 LysR substrate binding domain H4P35_16690 PF04909 Amidohydrolase H4P35_16695 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_16700 PF01479 S4 domain H4P35_16705 PF01253 Translation initiation factor SUI1 H4P35_16715 PF03976 Polyphosphate kinase 2 (PPK2) H4P35_16725 PF01053 Cys/Met metabolism PLP-dependent enzyme H4P35_16735 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_16740 PF00005 ABC transporter H4P35_16740 PF09383 NIL domain H4P35_16745 PF03180 NLPA lipoprotein H4P35_16760 PF00144 Beta-lactamase H4P35_16765 PF01979 Amidohydrolase family H4P35_16770 PF12697 Alpha/beta hydrolase family H4P35_16775 PF01557 Fumarylacetoacetate (FAA) hydrolase family H4P35_16800 PF00672 HAMP domain H4P35_16800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H4P35_16800 PF02203 Tar ligand binding domain homologue H4P35_16810 PF02805 Metal binding domain of Ada H4P35_16810 PF12833 Helix-turn-helix domain H4P35_16820 PF18029 Glyoxalase-like domain H4P35_16830 PF10503 Esterase PHB depolymerase H4P35_16835 PF03006 Haemolysin-III related H4P35_16855 PF01061 ABC-2 type transporter H4P35_16860 PF00005 ABC transporter H4P35_16875 PF13746 4Fe-4S dicluster domain H4P35_16875 PF12801 4Fe-4S binding domain H4P35_16875 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase H4P35_16880 PF13442 Cytochrome C oxidase, cbb3-type, subunit III H4P35_16880 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP H4P35_16895 PF00115 Cytochrome C and Quinol oxidase polypeptide I H4P35_16910 PF13649 Methyltransferase domain H4P35_16915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_16915 PF03466 LysR substrate binding domain H4P35_16920 PF08240 Alcohol dehydrogenase GroES-like domain H4P35_16920 PF00107 Zinc-binding dehydrogenase H4P35_16930 PF00463 Isocitrate lyase family H4P35_16935 PF14489 QueF-like protein H4P35_16935 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term H4P35_16940 PF03150 Di-haem cytochrome c peroxidase H4P35_16940 PF00034 Cytochrome c H4P35_16950 PF01066 CDP-alcohol phosphatidyltransferase H4P35_16955 PF01541 GIY-YIG catalytic domain H4P35_16955 PF02151 UvrB/uvrC motif H4P35_16955 PF08459 UvrC Helix-hairpin-helix N-terminal H4P35_16960 PF00933 Glycosyl hydrolase family 3 N terminal domain H4P35_16965 PF01648 4'-phosphopantetheinyl transferase superfamily H4P35_16970 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ H4P35_16975 PF02321 Outer membrane efflux protein H4P35_16980 PF00873 AcrB/AcrD/AcrF family H4P35_16985 PF00529 HlyD membrane-fusion protein of T1SS H4P35_16985 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H4P35_17005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_17005 PF03459 TOBE domain H4P35_17010 PF03459 TOBE domain H4P35_17010 PF00005 ABC transporter H4P35_17015 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_17025 PF02675 S-adenosylmethionine decarboxylase H4P35_17055 PF01266 FAD dependent oxidoreductase H4P35_17055 PF05430 S-adenosyl-L-methionine-dependent methyltransferase H4P35_17060 PF01266 FAD dependent oxidoreductase H4P35_17070 PF00005 ABC transporter H4P35_17075 PF02653 Branched-chain amino acid transport system / permease component H4P35_17085 PF00248 Aldo/keto reductase family H4P35_17090 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_17095 PF13193 AMP-binding enzyme C-terminal domain H4P35_17095 PF00501 AMP-binding enzyme H4P35_17100 PF00378 Enoyl-CoA hydratase/isomerase H4P35_17110 PF00392 Bacterial regulatory proteins, gntR family H4P35_17110 PF07729 FCD domain H4P35_17120 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H4P35_17120 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H4P35_17120 PF02770 Acyl-CoA dehydrogenase, middle domain H4P35_17125 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H4P35_17125 PF02770 Acyl-CoA dehydrogenase, middle domain H4P35_17125 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H4P35_17130 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_17140 PF00378 Enoyl-CoA hydratase/isomerase H4P35_17150 PF00108 Thiolase, N-terminal domain H4P35_17150 PF02803 Thiolase, C-terminal domain H4P35_17155 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H4P35_17155 PF02770 Acyl-CoA dehydrogenase, middle domain H4P35_17155 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H4P35_17165 PF00571 CBS domain H4P35_17185 PF06434 Aconitate hydratase 2 N-terminus H4P35_17185 PF11791 Aconitate B N-terminal domain H4P35_17185 PF00330 Aconitase family (aconitate hydratase) H4P35_17195 PF07715 TonB-dependent Receptor Plug Domain H4P35_17195 PF00593 TonB dependent receptor H4P35_17205 PF03466 LysR substrate binding domain H4P35_17205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_17210 PF00694 Aconitase C-terminal domain H4P35_17210 PF00330 Aconitase family (aconitate hydratase) H4P35_17215 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase H4P35_17230 PF09285 Elongation factor P, C-terminal H4P35_17230 PF01132 Elongation factor P (EF-P) OB domain H4P35_17230 PF08207 Elongation factor P (EF-P) KOW-like domain H4P35_17240 PF00005 ABC transporter H4P35_17240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H4P35_17245 PF12911 N-terminal TM domain of oligopeptide transport permease C H4P35_17245 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_17250 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_17265 PF01544 CorA-like Mg2+ transporter protein H4P35_17270 PF00580 UvrD/REP helicase N-terminal domain H4P35_17270 PF13361 UvrD-like helicase C-terminal domain H4P35_17280 PF00155 Aminotransferase class I and II H4P35_17280 PF00392 Bacterial regulatory proteins, gntR family H4P35_17285 PF00202 Aminotransferase class-III H4P35_17290 PF00171 Aldehyde dehydrogenase family H4P35_17295 PF00459 Inositol monophosphatase family H4P35_17300 PF02146 Sir2 family H4P35_17305 PF00132 Bacterial transferase hexapeptide (six repeats) H4P35_17310 PF16363 GDP-mannose 4,6 dehydratase H4P35_17315 PF00342 Phosphoglucose isomerase H4P35_17320 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I H4P35_17320 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II H4P35_17320 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III H4P35_17320 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain H4P35_17325 PF13614 AAA domain H4P35_17325 PF13807 G-rich domain on putative tyrosine kinase H4P35_17325 PF02706 Chain length determinant protein H4P35_17330 PF10531 SLBB domain H4P35_17330 PF02563 Polysaccharide biosynthesis/export protein H4P35_17335 PF02397 Bacterial sugar transferase H4P35_17340 PF00293 NUDIX domain H4P35_17345 PF01050 Mannose-6-phosphate isomerase H4P35_17345 PF00483 Nucleotidyl transferase H4P35_17355 PF16363 GDP-mannose 4,6 dehydratase H4P35_17360 PF01370 NAD dependent epimerase/dehydratase family H4P35_17370 PF00535 Glycosyl transferase family 2 H4P35_17380 PF13439 Glycosyltransferase Family 4 H4P35_17380 PF00534 Glycosyl transferases group 1 H4P35_17390 PF00132 Bacterial transferase hexapeptide (six repeats) H4P35_17395 PF13579 Glycosyl transferase 4-like domain H4P35_17395 PF00534 Glycosyl transferases group 1 H4P35_17425 PF00196 Bacterial regulatory proteins, luxR family H4P35_17425 PF00072 Response regulator receiver domain H4P35_17430 PF00072 Response regulator receiver domain H4P35_17430 PF00196 Bacterial regulatory proteins, luxR family H4P35_17445 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H4P35_17445 PF02770 Acyl-CoA dehydrogenase, middle domain H4P35_17445 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H4P35_17445 PF09317 Domain of unknown function (DUF1974) H4P35_17450 PF02803 Thiolase, C-terminal domain H4P35_17450 PF00108 Thiolase, N-terminal domain H4P35_17455 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain H4P35_17455 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain H4P35_17455 PF00378 Enoyl-CoA hydratase/isomerase H4P35_17465 PF00378 Enoyl-CoA hydratase/isomerase H4P35_17465 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain H4P35_17465 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain H4P35_17470 PF00108 Thiolase, N-terminal domain H4P35_17470 PF02803 Thiolase, C-terminal domain H4P35_17485 PF00501 AMP-binding enzyme H4P35_17485 PF13193 AMP-binding enzyme C-terminal domain H4P35_17490 PF07715 TonB-dependent Receptor Plug Domain H4P35_17490 PF00593 TonB dependent receptor H4P35_17495 PF03812 2-keto-3-deoxygluconate permease H4P35_17500 PF07005 Sugar-binding N-terminal domain H4P35_17500 PF17042 Nucleotide-binding C-terminal domain H4P35_17505 PF04166 Pyridoxal phosphate biosynthetic protein PdxA H4P35_17515 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain H4P35_17515 PF13378 Enolase C-terminal domain-like H4P35_17520 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_17525 PF00356 Bacterial regulatory proteins, lacI family H4P35_17530 PF04542 Sigma-70 region 2 H4P35_17530 PF08281 Sigma-70, region 4 H4P35_17530 PF12680 SnoaL-like domain H4P35_17540 PF03466 LysR substrate binding domain H4P35_17540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_17545 PF02566 OsmC-like protein H4P35_17550 PF05368 NmrA-like family H4P35_17560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_17560 PF03466 LysR substrate binding domain H4P35_17565 PF00392 Bacterial regulatory proteins, gntR family H4P35_17565 PF07729 FCD domain H4P35_17570 PF01557 Fumarylacetoacetate (FAA) hydrolase family H4P35_17575 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_17580 PF00501 AMP-binding enzyme H4P35_17580 PF13193 AMP-binding enzyme C-terminal domain H4P35_17585 PF01144 Coenzyme A transferase H4P35_17595 PF00378 Enoyl-CoA hydratase/isomerase H4P35_17600 PF02515 CoA-transferase family III H4P35_17605 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_17615 PF01614 Bacterial transcriptional regulator H4P35_17615 PF09339 IclR helix-turn-helix domain H4P35_17620 PF05995 Cysteine dioxygenase type I H4P35_17625 PF02146 Sir2 family H4P35_17640 PF03466 LysR substrate binding domain H4P35_17640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_17670 PF00581 Rhodanese-like domain H4P35_17680 PF00696 Amino acid kinase family H4P35_17680 PF01842 ACT domain H4P35_17680 PF13840 ACT domain H4P35_17685 PF09179 TilS substrate binding domain H4P35_17685 PF01171 PP-loop family H4P35_17690 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit H4P35_17695 PF06029 AlkA N-terminal domain H4P35_17695 PF00730 HhH-GPD superfamily base excision DNA repair protein H4P35_17695 PF12833 Helix-turn-helix domain H4P35_17695 PF02805 Metal binding domain of Ada H4P35_17700 PF01406 tRNA synthetases class I (C) catalytic domain H4P35_17700 PF09190 DALR domain H4P35_17710 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD H4P35_17715 PF00149 Calcineurin-like phosphoesterase H4P35_17720 PF02673 Bacitracin resistance protein BacA H4P35_17725 PF03471 Transporter associated domain H4P35_17725 PF03741 Integral membrane protein TerC family H4P35_17730 PF00127 Copper binding proteins, plastocyanin/azurin family H4P35_17735 PF12801 4Fe-4S binding domain H4P35_17735 PF04205 FMN-binding domain H4P35_17740 PF13473 Cupredoxin-like domain H4P35_17740 PF18764 Nitrous oxide reductase propeller repeat H4P35_17740 PF18793 Nitrous oxide reductase propeller repeat 2 H4P35_17745 PF05048 Periplasmic copper-binding protein (NosD) H4P35_17750 PF00005 ABC transporter H4P35_17755 PF12679 ABC-2 family transporter protein H4P35_17760 PF05573 NosL H4P35_17770 PF00459 Inositol monophosphatase family H4P35_17775 PF00588 SpoU rRNA Methylase family H4P35_17780 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_17790 PF00924 Mechanosensitive ion channel H4P35_17790 PF05552 Conserved TM helix H4P35_17815 PF03466 LysR substrate binding domain H4P35_17815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_17820 PF00596 Class II Aldolase and Adducin N-terminal domain H4P35_17825 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_17835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_17835 PF03466 LysR substrate binding domain H4P35_17840 PF09084 NMT1/THI5 like H4P35_17845 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_17850 PF00005 ABC transporter H4P35_17860 PF01425 Amidase H4P35_17865 PF00392 Bacterial regulatory proteins, gntR family H4P35_17865 PF07729 FCD domain H4P35_17880 PF03358 NADPH-dependent FMN reductase H4P35_17885 PF07311 Dodecin H4P35_17895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_17895 PF03466 LysR substrate binding domain H4P35_17900 PF00106 short chain dehydrogenase H4P35_17905 PF08240 Alcohol dehydrogenase GroES-like domain H4P35_17905 PF00107 Zinc-binding dehydrogenase H4P35_17925 PF01624 MutS domain I H4P35_17925 PF05188 MutS domain II H4P35_17925 PF05192 MutS domain III H4P35_17925 PF05190 MutS family domain IV H4P35_17925 PF00488 MutS domain V H4P35_17930 PF08007 Cupin superfamily protein H4P35_17940 PF06804 NlpB/DapX lipoprotein H4P35_17945 PF00701 Dihydrodipicolinate synthetase family H4P35_17950 PF02163 Peptidase family M50 H4P35_17955 PF01300 Telomere recombination H4P35_17960 PF04228 Putative neutral zinc metallopeptidase H4P35_18010 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family H4P35_18015 PF01979 Amidohydrolase family H4P35_18020 PF03600 Citrate transporter H4P35_18020 PF02080 TrkA-C domain H4P35_18025 PF13520 Amino acid permease H4P35_18035 PF13520 Amino acid permease H4P35_18050 PF02321 Outer membrane efflux protein H4P35_18055 PF00873 AcrB/AcrD/AcrF family H4P35_18060 PF00529 HlyD membrane-fusion protein of T1SS H4P35_18060 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H4P35_18065 PF01739 CheR methyltransferase, SAM binding domain H4P35_18065 PF03705 CheR methyltransferase, all-alpha domain H4P35_18065 PF08448 PAS fold H4P35_18065 PF01339 CheB methylesterase H4P35_18070 PF02540 NAD synthase H4P35_18080 PF00072 Response regulator receiver domain H4P35_18080 PF13426 PAS domain H4P35_18080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4P35_18085 PF00483 Nucleotidyl transferase H4P35_18100 PF00107 Zinc-binding dehydrogenase H4P35_18100 PF13823 Alcohol dehydrogenase GroES-associated H4P35_18100 PF08240 Alcohol dehydrogenase GroES-like domain H4P35_18110 PF00106 short chain dehydrogenase H4P35_18115 PF01370 NAD dependent epimerase/dehydratase family H4P35_18125 PF05067 Manganese containing catalase H4P35_18130 PF16363 GDP-mannose 4,6 dehydratase H4P35_18145 PF00535 Glycosyl transferase family 2 H4P35_18150 PF16861 Carbamoyltransferase C-terminus H4P35_18150 PF02543 Carbamoyltransferase N-terminus H4P35_18170 PF13439 Glycosyltransferase Family 4 H4P35_18170 PF00534 Glycosyl transferases group 1 H4P35_18175 PF00664 ABC transporter transmembrane region H4P35_18175 PF00005 ABC transporter H4P35_18190 PF05974 Domain of unknown function (DUF892) H4P35_18215 PF02535 ZIP Zinc transporter H4P35_18220 PF06411 HdeA/HdeB family H4P35_18225 PF00924 Mechanosensitive ion channel H4P35_18235 PF01699 Sodium/calcium exchanger protein H4P35_18255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4P35_18255 PF00512 His Kinase A (phospho-acceptor) domain H4P35_18255 PF08448 PAS fold H4P35_18255 PF13188 PAS domain H4P35_18255 PF00072 Response regulator receiver domain H4P35_18260 PF06745 KaiC H4P35_18270 PF00196 Bacterial regulatory proteins, luxR family H4P35_18270 PF00072 Response regulator receiver domain H4P35_18290 PF01757 Acyltransferase family H4P35_18305 PF13396 Phospholipase_D-nuclease N-terminal H4P35_18305 PF13091 PLD-like domain H4P35_18315 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase H4P35_18315 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase H4P35_18325 PF00392 Bacterial regulatory proteins, gntR family H4P35_18325 PF07729 FCD domain H4P35_18330 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_18340 PF00595 PDZ domain H4P35_18360 PF13609 Gram-negative porin H4P35_18365 PF02540 NAD synthase H4P35_18365 PF00117 Glutamine amidotransferase class-I H4P35_18365 PF00958 GMP synthase C terminal domain H4P35_18375 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_18380 PF03737 Aldolase/RraA H4P35_18385 PF02585 GlcNAc-PI de-N-acetylase H4P35_18395 PF01799 [2Fe-2S] binding domain H4P35_18395 PF00111 2Fe-2S iron-sulfur cluster binding domain H4P35_18400 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase H4P35_18405 PF13478 XdhC Rossmann domain H4P35_18405 PF02625 XdhC and CoxI family H4P35_18410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_18410 PF03466 LysR substrate binding domain H4P35_18415 PF00392 Bacterial regulatory proteins, gntR family H4P35_18415 PF07702 UTRA domain H4P35_18420 PF01175 Urocanase Rossmann-like domain H4P35_18420 PF17392 Urocanase C-terminal domain H4P35_18420 PF17391 Urocanase N-terminal domain H4P35_18425 PF00221 Aromatic amino acid lyase H4P35_18430 PF00324 Amino acid permease H4P35_18435 PF01979 Amidohydrolase family H4P35_18440 PF03060 Nitronate monooxygenase H4P35_18445 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_18450 PF02515 CoA-transferase family III H4P35_18455 PF00378 Enoyl-CoA hydratase/isomerase H4P35_18465 PF00682 HMGL-like H4P35_18470 PF13193 AMP-binding enzyme C-terminal domain H4P35_18470 PF00501 AMP-binding enzyme H4P35_18475 PF00378 Enoyl-CoA hydratase/isomerase H4P35_18600 PF00574 Clp protease H4P35_18630 PF00486 Transcriptional regulatory protein, C terminal H4P35_18630 PF00072 Response regulator receiver domain H4P35_18705 PF00072 Response regulator receiver domain H4P35_18705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4P35_18705 PF13426 PAS domain H4P35_18710 PF02954 Bacterial regulatory protein, Fis family H4P35_18710 PF00072 Response regulator receiver domain H4P35_18710 PF00158 Sigma-54 interaction domain H4P35_18715 PF00313 'Cold-shock' DNA-binding domain H4P35_18770 PF01266 FAD dependent oxidoreductase H4P35_18775 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_18780 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_18785 PF00497 Bacterial extracellular solute-binding proteins, family 3 H4P35_18790 PF00005 ABC transporter H4P35_18795 PF00171 Aldehyde dehydrogenase family H4P35_18805 PF17200 Single Cache domain 2 H4P35_18805 PF07730 Histidine kinase H4P35_18810 PF00072 Response regulator receiver domain H4P35_18810 PF00196 Bacterial regulatory proteins, luxR family H4P35_18820 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_18825 PF00005 ABC transporter H4P35_18830 PF02560 Cyanate lyase C-terminal domain H4P35_18835 PF08543 Phosphomethylpyrimidine kinase H4P35_18845 PF08671 Anti-repressor SinI H4P35_18845 PF01381 Helix-turn-helix H4P35_18850 PF00596 Class II Aldolase and Adducin N-terminal domain H4P35_18860 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_18880 PF00595 PDZ domain H4P35_18880 PF03572 Peptidase family S41 H4P35_18895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_18895 PF03466 LysR substrate binding domain H4P35_18900 PF02558 Ketopantoate reductase PanE/ApbA H4P35_18900 PF08546 Ketopantoate reductase PanE/ApbA C terminal H4P35_18915 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_18920 PF07687 Peptidase dimerisation domain H4P35_18920 PF01546 Peptidase family M20/M25/M40 H4P35_18940 PF02558 Ketopantoate reductase PanE/ApbA H4P35_18940 PF08546 Ketopantoate reductase PanE/ApbA C terminal H4P35_18945 PF03466 LysR substrate binding domain H4P35_18945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_18950 PF04542 Sigma-70 region 2 H4P35_18950 PF08281 Sigma-70, region 4 H4P35_18960 PF00593 TonB dependent receptor H4P35_18960 PF07660 Secretin and TonB N terminus short domain H4P35_18960 PF07715 TonB-dependent Receptor Plug Domain H4P35_18975 PF02567 Phenazine biosynthesis-like protein H4P35_18980 PF07969 Amidohydrolase family H4P35_18985 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_18990 PF00291 Pyridoxal-phosphate dependent enzyme H4P35_18995 PF00795 Carbon-nitrogen hydrolase H4P35_19000 PF03466 LysR substrate binding domain H4P35_19000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_19005 PF03746 LamB/YcsF family H4P35_19015 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_19020 PF00005 ABC transporter H4P35_19020 PF08402 TOBE domain H4P35_19025 PF02682 Carboxyltransferase domain, subdomain C and D H4P35_19030 PF02626 Carboxyltransferase domain, subdomain A and B H4P35_19035 PF00392 Bacterial regulatory proteins, gntR family H4P35_19035 PF07729 FCD domain H4P35_19040 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H4P35_19040 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain H4P35_19045 PF07683 Cobalamin synthesis protein cobW C-terminal domain H4P35_19045 PF02492 CobW/HypB/UreG, nucleotide-binding domain H4P35_19050 PF00857 Isochorismatase family H4P35_19055 PF01979 Amidohydrolase family H4P35_19060 PF00330 Aconitase family (aconitate hydratase) H4P35_19060 PF00694 Aconitase C-terminal domain H4P35_19065 PF07729 FCD domain H4P35_19065 PF00392 Bacterial regulatory proteins, gntR family H4P35_19085 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_19090 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_19095 PF00378 Enoyl-CoA hydratase/isomerase H4P35_19100 PF02515 CoA-transferase family III H4P35_19105 PF03466 LysR substrate binding domain H4P35_19105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_19115 PF07690 Major Facilitator Superfamily H4P35_19140 PF08546 Ketopantoate reductase PanE/ApbA C terminal H4P35_19140 PF02558 Ketopantoate reductase PanE/ApbA H4P35_19145 PF00005 ABC transporter H4P35_19150 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_19155 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_19160 PF00497 Bacterial extracellular solute-binding proteins, family 3 H4P35_19165 PF00155 Aminotransferase class I and II H4P35_19170 PF03737 Aldolase/RraA H4P35_19180 PF08240 Alcohol dehydrogenase GroES-like domain H4P35_19180 PF00107 Zinc-binding dehydrogenase H4P35_19205 PF00011 Hsp20/alpha crystallin family H4P35_19210 PF00582 Universal stress protein family H4P35_19215 PF00689 Cation transporting ATPase, C-terminus H4P35_19215 PF00690 Cation transporter/ATPase, N-terminus H4P35_19230 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_19235 PF13380 CoA binding domain H4P35_19235 PF13607 Succinyl-CoA ligase like flavodoxin domain H4P35_19240 PF00378 Enoyl-CoA hydratase/isomerase H4P35_19250 PF08281 Sigma-70, region 4 H4P35_19250 PF04542 Sigma-70 region 2 H4P35_19260 PF07715 TonB-dependent Receptor Plug Domain H4P35_19260 PF00593 TonB dependent receptor H4P35_19270 PF08031 Berberine and berberine like H4P35_19270 PF01565 FAD binding domain H4P35_19290 PF18146 Damage-inducible protein CinA KH domain H4P35_19290 PF00994 Probable molybdopterin binding domain H4P35_19290 PF02464 Competence-damaged protein H4P35_19300 PF05401 Nodulation protein S (NodS) H4P35_19315 PF00270 DEAD/DEAH box helicase H4P35_19315 PF08494 DEAD/H associated H4P35_19315 PF00271 Helicase conserved C-terminal domain H4P35_19320 PF04679 ATP dependent DNA ligase C terminal region H4P35_19320 PF01068 ATP dependent DNA ligase domain H4P35_19320 PF04675 DNA ligase N terminus H4P35_19325 PF04675 DNA ligase N terminus H4P35_19325 PF04679 ATP dependent DNA ligase C terminal region H4P35_19325 PF01068 ATP dependent DNA ligase domain H4P35_19335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_19340 PF02515 CoA-transferase family III H4P35_19345 PF00107 Zinc-binding dehydrogenase H4P35_19345 PF08240 Alcohol dehydrogenase GroES-like domain H4P35_19350 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_19355 PF00850 Histone deacetylase domain H4P35_19360 PF00583 Acetyltransferase (GNAT) family H4P35_19365 PF10518 TAT (twin-arginine translocation) pathway signal sequence H4P35_19365 PF00149 Calcineurin-like phosphoesterase H4P35_19380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_19380 PF03466 LysR substrate binding domain H4P35_19385 PF02515 CoA-transferase family III H4P35_19395 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_19400 PF01361 Tautomerase enzyme H4P35_19405 PF00571 CBS domain H4P35_19405 PF00005 ABC transporter H4P35_19410 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_19425 PF07690 Major Facilitator Superfamily H4P35_19430 PF00830 Ribosomal L28 family H4P35_19435 PF00471 Ribosomal protein L33 H4P35_19440 PF13458 Periplasmic binding protein H4P35_19450 PF00005 ABC transporter H4P35_19450 PF12399 Branched-chain amino acid ATP-binding cassette transporter H4P35_19455 PF00916 Sulfate permease family H4P35_19455 PF01740 STAS domain H4P35_19465 PF07943 Penicillin-binding protein 5, C-terminal domain H4P35_19465 PF00768 D-alanyl-D-alanine carboxypeptidase H4P35_19475 PF01047 MarR family H4P35_19480 PF07690 Major Facilitator Superfamily H4P35_19485 PF08264 Anticodon-binding domain of tRNA H4P35_19485 PF09334 tRNA synthetases class I (M) H4P35_19485 PF13603 Leucyl-tRNA synthetase, Domain 2 H4P35_19485 PF00133 tRNA synthetases class I (I, L, M and V) H4P35_19500 PF00171 Aldehyde dehydrogenase family H4P35_19515 PF01425 Amidase H4P35_19525 PF07690 Major Facilitator Superfamily H4P35_19540 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain H4P35_19540 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain H4P35_19555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_19555 PF03466 LysR substrate binding domain H4P35_19590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_19590 PF03466 LysR substrate binding domain H4P35_19595 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain H4P35_19595 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain H4P35_19600 PF03466 LysR substrate binding domain H4P35_19600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_19605 PF12794 Mechanosensitive ion channel inner membrane domain 1 H4P35_19605 PF12795 Mechanosensitive ion channel porin domain H4P35_19605 PF00924 Mechanosensitive ion channel H4P35_19655 PF05199 GMC oxidoreductase H4P35_19655 PF00732 GMC oxidoreductase H4P35_19660 PF08501 Shikimate dehydrogenase substrate binding domain H4P35_19660 PF01488 Shikimate / quinate 5-dehydrogenase H4P35_19660 PF18317 Shikimate 5'-dehydrogenase C-terminal domain H4P35_19665 PF02780 Transketolase, C-terminal domain H4P35_19665 PF02779 Transketolase, pyrimidine binding domain H4P35_19670 PF00456 Transketolase, thiamine diphosphate binding domain H4P35_19675 PF00392 Bacterial regulatory proteins, gntR family H4P35_19675 PF07729 FCD domain H4P35_19680 PF00465 Iron-containing alcohol dehydrogenase H4P35_19690 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain H4P35_19690 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain H4P35_19700 PF13458 Periplasmic binding protein H4P35_19705 PF02653 Branched-chain amino acid transport system / permease component H4P35_19710 PF00005 ABC transporter H4P35_19710 PF12399 Branched-chain amino acid ATP-binding cassette transporter H4P35_19715 PF00005 ABC transporter H4P35_19720 PF00550 Phosphopantetheine attachment site H4P35_19720 PF00698 Acyl transferase domain H4P35_19720 PF08659 KR domain H4P35_19720 PF08240 Alcohol dehydrogenase GroES-like domain H4P35_19720 PF14765 Polyketide synthase dehydratase H4P35_19730 PF05724 Thiopurine S-methyltransferase (TPMT) H4P35_19755 PF00248 Aldo/keto reductase family H4P35_19760 PF12833 Helix-turn-helix domain H4P35_19760 PF06719 AraC-type transcriptional regulator N-terminus H4P35_19765 PF03466 LysR substrate binding domain H4P35_19765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_19770 PF00857 Isochorismatase family H4P35_19820 PF00156 Phosphoribosyl transferase domain H4P35_19820 PF05139 Erythromycin esterase H4P35_19825 PF05139 Erythromycin esterase H4P35_19825 PF00156 Phosphoribosyl transferase domain H4P35_19840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_19840 PF03466 LysR substrate binding domain H4P35_19850 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_19860 PF00005 ABC transporter H4P35_19865 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_19870 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_19875 PF12849 PBP superfamily domain H4P35_19880 PF13089 Polyphosphate kinase N-terminal domain H4P35_19880 PF17941 Polyphosphate kinase C-terminal domain 1 H4P35_19880 PF13090 Polyphosphate kinase C-terminal domain 2 H4P35_19880 PF02503 Polyphosphate kinase middle domain H4P35_19885 PF02541 Ppx/GppA phosphatase family H4P35_19895 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II H4P35_19895 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III H4P35_19895 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain H4P35_19895 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I H4P35_19900 PF00809 Pterin binding enzyme H4P35_19905 PF00004 ATPase family associated with various cellular activities (AAA) H4P35_19905 PF17862 AAA+ lid domain H4P35_19905 PF06480 FtsH Extracellular H4P35_19905 PF01434 Peptidase family M41 H4P35_19910 PF01728 FtsJ-like methyltransferase H4P35_19915 PF01985 CRS1 / YhbY (CRM) domain H4P35_19920 PF01272 Transcription elongation factor, GreA/GreB, C-term H4P35_19920 PF03449 Transcription elongation factor, N-terminal H4P35_19925 PF00860 Permease family H4P35_19940 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_19945 PF08402 TOBE domain H4P35_19945 PF00005 ABC transporter H4P35_19950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_19950 PF03466 LysR substrate binding domain H4P35_19955 PF00300 Histidine phosphatase superfamily (branch 1) H4P35_19960 PF01548 Transposase H4P35_19960 PF02371 Transposase IS116/IS110/IS902 family H4P35_19970 PF02142 MGS-like domain H4P35_19970 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain H4P35_19970 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain H4P35_19975 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain H4P35_19975 PF00117 Glutamine amidotransferase class-I H4P35_19980 PF00923 Transaldolase/Fructose-6-phosphate aldolase H4P35_19990 PF01590 GAF domain H4P35_19990 PF08446 PAS fold H4P35_19990 PF00360 Phytochrome region H4P35_19990 PF00512 His Kinase A (phospho-acceptor) domain H4P35_19990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4P35_19995 PF00072 Response regulator receiver domain H4P35_19995 PF00486 Transcriptional regulatory protein, C terminal H4P35_20005 PF01126 Heme oxygenase H4P35_20010 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_20015 PF00005 ABC transporter H4P35_20025 PF02515 CoA-transferase family III H4P35_20030 PF13662 Toprim domain H4P35_20030 PF02132 RecR protein H4P35_20035 PF02575 YbaB/EbfC DNA-binding family H4P35_20040 PF12169 DNA polymerase III subunits gamma and tau domain III H4P35_20040 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding H4P35_20040 PF12170 DNA polymerase III tau subunit V interacting with alpha H4P35_20050 PF00580 UvrD/REP helicase N-terminal domain H4P35_20050 PF12705 PD-(D/E)XK nuclease superfamily H4P35_20050 PF13361 UvrD-like helicase C-terminal domain H4P35_20075 PF00768 D-alanyl-D-alanine carboxypeptidase H4P35_20085 PF00107 Zinc-binding dehydrogenase H4P35_20085 PF08240 Alcohol dehydrogenase GroES-like domain H4P35_20090 PF00356 Bacterial regulatory proteins, lacI family H4P35_20100 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_20105 PF02913 FAD linked oxidases, C-terminal domain H4P35_20105 PF01565 FAD binding domain H4P35_20115 PF04073 Aminoacyl-tRNA editing domain H4P35_20120 PF02899 Phage integrase, N-terminal SAM-like domain H4P35_20120 PF00589 Phage integrase family H4P35_20125 PF03466 LysR substrate binding domain H4P35_20125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_20130 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain H4P35_20130 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain H4P35_20130 PF00205 Thiamine pyrophosphate enzyme, central domain H4P35_20135 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H4P35_20135 PF02770 Acyl-CoA dehydrogenase, middle domain H4P35_20135 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H4P35_20150 PF00037 4Fe-4S binding domain H4P35_20150 PF00175 Oxidoreductase NAD-binding domain H4P35_20150 PF00970 Oxidoreductase FAD-binding domain H4P35_20160 PF00378 Enoyl-CoA hydratase/isomerase H4P35_20165 PF01202 Shikimate kinase H4P35_20175 PF13193 AMP-binding enzyme C-terminal domain H4P35_20175 PF00501 AMP-binding enzyme H4P35_20190 PF02653 Branched-chain amino acid transport system / permease component H4P35_20200 PF12399 Branched-chain amino acid ATP-binding cassette transporter H4P35_20200 PF00005 ABC transporter H4P35_20205 PF00005 ABC transporter H4P35_20210 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain H4P35_20210 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain H4P35_20215 PF00497 Bacterial extracellular solute-binding proteins, family 3 H4P35_20220 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_20225 PF01144 Coenzyme A transferase H4P35_20230 PF01144 Coenzyme A transferase H4P35_20235 PF09339 IclR helix-turn-helix domain H4P35_20235 PF01614 Bacterial transcriptional regulator H4P35_20240 PF03481 Putative GTP-binding controlling metal-binding H4P35_20240 PF01300 Telomere recombination H4P35_20245 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain H4P35_20245 PF02222 ATP-grasp domain H4P35_20250 PF00731 AIR carboxylase H4P35_20255 PF02600 Disulfide bond formation protein DsbB H4P35_20265 PF01259 SAICAR synthetase H4P35_20275 PF01116 Fructose-bisphosphate aldolase class-II H4P35_20285 PF00375 Sodium:dicarboxylate symporter family H4P35_20300 PF03466 LysR substrate binding domain H4P35_20300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_20310 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_20330 PF01176 Translation initiation factor 1A / IF-1 H4P35_20340 PF01551 Peptidase family M23 H4P35_20340 PF08525 Opacity-associated protein A N-terminal motif H4P35_20340 PF01476 LysM domain H4P35_20350 PF00994 Probable molybdopterin binding domain H4P35_20360 PF01384 Phosphate transporter family H4P35_20385 PF01556 DnaJ C terminal domain H4P35_20385 PF00226 DnaJ domain H4P35_20390 PF00583 Acetyltransferase (GNAT) family H4P35_20400 PF14834 Glutathione S-transferase, C-terminal domain H4P35_20400 PF02798 Glutathione S-transferase, N-terminal domain H4P35_20405 PF11339 Protein of unknown function (DUF3141) H4P35_20410 PF01515 Phosphate acetyl/butaryl transferase H4P35_20415 PF00871 Acetokinase family H4P35_20425 PF01740 STAS domain H4P35_20425 PF00916 Sulfate permease family H4P35_20430 PF00162 Phosphoglycerate kinase H4P35_20435 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain H4P35_20435 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain H4P35_20440 PF00456 Transketolase, thiamine diphosphate binding domain H4P35_20440 PF02779 Transketolase, pyrimidine binding domain H4P35_20440 PF02780 Transketolase, C-terminal domain H4P35_20445 PF04452 RNA methyltransferase H4P35_20450 PF01337 Barstar (barnase inhibitor) H4P35_20455 PF01734 Patatin-like phospholipase H4P35_20460 PF01515 Phosphate acetyl/butaryl transferase H4P35_20460 PF00390 Malic enzyme, N-terminal domain H4P35_20460 PF03949 Malic enzyme, NAD binding domain H4P35_20470 PF00155 Aminotransferase class I and II H4P35_20475 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain H4P35_20475 PF01464 Transglycosylase SLT domain H4P35_20480 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase H4P35_20495 PF05957 Bacterial protein of unknown function (DUF883) H4P35_20505 PF00384 Molybdopterin oxidoreductase H4P35_20505 PF01568 Molydopterin dinucleotide binding domain H4P35_20505 PF04879 Molybdopterin oxidoreductase Fe4S4 domain H4P35_20510 PF18267 Rubredoxin NAD+ reductase C-terminal domain H4P35_20510 PF04324 BFD-like [2Fe-2S] binding domain H4P35_20510 PF01077 Nitrite and sulphite reductase 4Fe-4S domain H4P35_20510 PF07992 Pyridine nucleotide-disulphide oxidoreductase H4P35_20510 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain H4P35_20515 PF00005 ABC transporter H4P35_20520 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_20535 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases H4P35_20535 PF14824 Sirohaem biosynthesis protein central H4P35_20535 PF10414 Sirohaem synthase dimerisation region H4P35_20545 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family H4P35_20550 PF02547 Queuosine biosynthesis protein H4P35_20555 PF01702 Queuine tRNA-ribosyltransferase H4P35_20560 PF02699 Preprotein translocase subunit H4P35_20565 PF07549 SecD/SecF GG Motif H4P35_20565 PF13721 SecD export protein N-terminal TM region H4P35_20565 PF02355 Protein export membrane protein H4P35_20570 PF07549 SecD/SecF GG Motif H4P35_20570 PF02355 Protein export membrane protein H4P35_20595 PF00919 Uncharacterized protein family UPF0004 H4P35_20595 PF01938 TRAM domain H4P35_20595 PF04055 Radical SAM superfamily H4P35_20600 PF02562 PhoH-like protein H4P35_20605 PF02130 Uncharacterized protein family UPF0054 H4P35_20610 PF00571 CBS domain H4P35_20610 PF03471 Transporter associated domain H4P35_20615 PF00795 Carbon-nitrogen hydrolase H4P35_20620 PF00248 Aldo/keto reductase family H4P35_20655 PF01740 STAS domain H4P35_20655 PF13426 PAS domain H4P35_20660 PF06968 Biotin and Thiamin Synthesis associated domain H4P35_20660 PF04055 Radical SAM superfamily H4P35_20675 PF08534 Redoxin H4P35_20685 PF01738 Dienelactone hydrolase family H4P35_20695 PF01967 MoaC family H4P35_20705 PF02391 MoaE protein H4P35_20710 PF00994 Probable molybdopterin binding domain H4P35_20715 PF00994 Probable molybdopterin binding domain H4P35_20715 PF03453 MoeA N-terminal region (domain I and II) H4P35_20715 PF03454 MoeA C-terminal region (domain IV) H4P35_20720 PF12804 MobA-like NTP transferase domain H4P35_20725 PF06463 Molybdenum Cofactor Synthesis C H4P35_20725 PF04055 Radical SAM superfamily H4P35_20740 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit H4P35_20740 PF00037 4Fe-4S binding domain H4P35_20740 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region H4P35_20745 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region H4P35_20745 PF01568 Molydopterin dinucleotide binding domain H4P35_20745 PF00384 Molybdopterin oxidoreductase H4P35_20745 PF04879 Molybdopterin oxidoreductase Fe4S4 domain H4P35_20745 PF12838 4Fe-4S dicluster domain H4P35_20750 PF02634 FdhD/NarQ family H4P35_20760 PF07690 Major Facilitator Superfamily H4P35_20765 PF05175 Methyltransferase small domain H4P35_20775 PF07690 Major Facilitator Superfamily H4P35_20780 PF12833 Helix-turn-helix domain H4P35_20785 PF00106 short chain dehydrogenase H4P35_20810 PF03466 LysR substrate binding domain H4P35_20810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_20815 PF01177 Asp/Glu/Hydantoin racemase H4P35_20820 PF00582 Universal stress protein family H4P35_20830 PF07995 Glucose / Sorbosone dehydrogenase H4P35_20860 PF00583 Acetyltransferase (GNAT) family H4P35_20870 PF08281 Sigma-70, region 4 H4P35_20870 PF04542 Sigma-70 region 2 H4P35_20880 PF00392 Bacterial regulatory proteins, gntR family H4P35_20880 PF07729 FCD domain H4P35_20885 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain H4P35_20885 PF00364 Biotin-requiring enzyme H4P35_20885 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain H4P35_20885 PF02785 Biotin carboxylase C-terminal domain H4P35_20885 PF00289 Biotin carboxylase, N-terminal domain H4P35_20885 PF02785 Biotin carboxylase C-terminal domain H4P35_20885 PF00289 Biotin carboxylase, N-terminal domain H4P35_20885 PF00364 Biotin-requiring enzyme H4P35_20890 PF01425 Amidase H4P35_20900 PF02653 Branched-chain amino acid transport system / permease component H4P35_20910 PF12399 Branched-chain amino acid ATP-binding cassette transporter H4P35_20910 PF00005 ABC transporter H4P35_20915 PF00005 ABC transporter H4P35_20920 PF03960 ArsC family H4P35_20925 PF01569 PAP2 superfamily H4P35_20930 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_20935 PF00180 Isocitrate/isopropylmalate dehydrogenase H4P35_20940 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain H4P35_20940 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain H4P35_20945 PF00730 HhH-GPD superfamily base excision DNA repair protein H4P35_20945 PF06029 AlkA N-terminal domain H4P35_20945 PF02805 Metal binding domain of Ada H4P35_20945 PF12833 Helix-turn-helix domain H4P35_20950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_20950 PF03466 LysR substrate binding domain H4P35_20955 PF04461 Protein of unknown function (DUF520) H4P35_20960 PF00005 ABC transporter H4P35_20965 PF01032 FecCD transport family H4P35_20970 PF01497 Periplasmic binding protein H4P35_20975 PF05171 Haemin-degrading HemS.ChuX domain H4P35_20985 PF16220 Domain of unknown function (DUF4880) H4P35_20985 PF04773 FecR protein H4P35_20990 PF04542 Sigma-70 region 2 H4P35_20990 PF08281 Sigma-70, region 4 H4P35_21005 PF13280 WYL domain H4P35_21005 PF08279 HTH domain H4P35_21015 PF00324 Amino acid permease H4P35_21020 PF00266 Aminotransferase class-V H4P35_21025 PF01037 Lrp/AsnC ligand binding domain H4P35_21030 PF03006 Haemolysin-III related H4P35_21035 PF03576 Peptidase family S58 H4P35_21040 PF00497 Bacterial extracellular solute-binding proteins, family 3 H4P35_21045 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_21050 PF00005 ABC transporter H4P35_21055 PF01476 LysM domain H4P35_21055 PF01551 Peptidase family M23 H4P35_21065 PF02630 SCO1/SenC H4P35_21075 PF00512 His Kinase A (phospho-acceptor) domain H4P35_21075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4P35_21080 PF00072 Response regulator receiver domain H4P35_21085 PF00116 Cytochrome C oxidase subunit II, periplasmic domain H4P35_21085 PF06481 COX Aromatic Rich Motif H4P35_21090 PF00115 Cytochrome C and Quinol oxidase polypeptide I H4P35_21095 PF00510 Cytochrome c oxidase subunit III H4P35_21100 PF03626 Prokaryotic Cytochrome C oxidase subunit IV H4P35_21110 PF04891 NifQ H4P35_21115 PF05638 Type VI secretion system effector, Hcp H4P35_21120 PF04717 Type VI secretion system, phage-baseplate injector H4P35_21120 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) H4P35_21120 PF13296 Putative type VI secretion system Rhs element Vgr H4P35_21165 PF07715 TonB-dependent Receptor Plug Domain H4P35_21165 PF00593 TonB dependent receptor H4P35_21170 PF04102 SlyX H4P35_21185 PF01515 Phosphate acetyl/butaryl transferase H4P35_21185 PF03949 Malic enzyme, NAD binding domain H4P35_21185 PF00390 Malic enzyme, N-terminal domain H4P35_21195 PF00689 Cation transporting ATPase, C-terminus H4P35_21195 PF00690 Cation transporter/ATPase, N-terminus H4P35_21215 PF00892 EamA-like transporter family H4P35_21230 PF03466 LysR substrate binding domain H4P35_21230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_21245 PF00106 short chain dehydrogenase H4P35_21260 PF01381 Helix-turn-helix H4P35_21260 PF08671 Anti-repressor SinI H4P35_21265 PF13091 PLD-like domain H4P35_21270 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA H4P35_21275 PF13532 2OG-Fe(II) oxygenase superfamily H4P35_21280 PF03781 Sulfatase-modifying factor enzyme 1 H4P35_21285 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H4P35_21290 PF04209 homogentisate 1,2-dioxygenase H4P35_21300 PF02308 MgtC family H4P35_21305 PF13419 Haloacid dehalogenase-like hydrolase H4P35_21310 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA H4P35_21315 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_21320 PF00330 Aconitase family (aconitate hydratase) H4P35_21320 PF00694 Aconitase C-terminal domain H4P35_21330 PF10282 Lactonase, 7-bladed beta-propeller H4P35_21335 PF07715 TonB-dependent Receptor Plug Domain H4P35_21335 PF00593 TonB dependent receptor H4P35_21340 PF04773 FecR protein H4P35_21340 PF16220 Domain of unknown function (DUF4880) H4P35_21350 PF00072 Response regulator receiver domain H4P35_21350 PF13426 PAS domain H4P35_21350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4P35_21360 PF07715 TonB-dependent Receptor Plug Domain H4P35_21360 PF00593 TonB dependent receptor H4P35_21360 PF07660 Secretin and TonB N terminus short domain H4P35_21365 PF04773 FecR protein H4P35_21365 PF16220 Domain of unknown function (DUF4880) H4P35_21385 PF01145 SPFH domain / Band 7 family H4P35_21395 PF16485 Protealysin propeptide H4P35_21395 PF02868 Thermolysin metallopeptidase, alpha-helical domain H4P35_21395 PF01447 Thermolysin metallopeptidase, catalytic domain H4P35_21405 PF07690 Major Facilitator Superfamily H4P35_21410 PF02311 AraC-like ligand binding domain H4P35_21410 PF12833 Helix-turn-helix domain H4P35_21420 PF03741 Integral membrane protein TerC family H4P35_21425 PF03466 LysR substrate binding domain H4P35_21425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_21445 PF07715 TonB-dependent Receptor Plug Domain H4P35_21445 PF00593 TonB dependent receptor H4P35_21465 PF00850 Histone deacetylase domain H4P35_21470 PF07690 Major Facilitator Superfamily H4P35_21470 PF00083 Sugar (and other) transporter H4P35_21475 PF00116 Cytochrome C oxidase subunit II, periplasmic domain H4P35_21475 PF06481 COX Aromatic Rich Motif H4P35_21480 PF00115 Cytochrome C and Quinol oxidase polypeptide I H4P35_21485 PF00510 Cytochrome c oxidase subunit III H4P35_21490 PF03626 Prokaryotic Cytochrome C oxidase subunit IV H4P35_21495 PF02104 SURF1 family H4P35_21500 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family H4P35_21505 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase H4P35_21505 PF14572 Phosphoribosyl synthetase-associated domain H4P35_21515 PF13609 Gram-negative porin H4P35_21545 PF03352 Methyladenine glycosylase H4P35_21570 PF00248 Aldo/keto reductase family H4P35_21580 PF17755 UvrA DNA-binding domain H4P35_21585 PF01494 FAD binding domain H4P35_21600 PF00596 Class II Aldolase and Adducin N-terminal domain H4P35_21655 PF00004 ATPase family associated with various cellular activities (AAA) H4P35_21655 PF16450 Proteasomal ATPase OB C-terminal domain H4P35_21655 PF17758 Proteasomal ATPase OB N-terminal domain H4P35_21710 PF07691 PA14 domain H4P35_21710 PF12791 Anti-sigma factor N-terminus H4P35_21725 PF13018 Extended Signal Peptide of Type V secretion system H4P35_21725 PF05662 Coiled stalk of trimeric autotransporter adhesin H4P35_21725 PF05658 Head domain of trimeric autotransporter adhesin H4P35_21725 PF13018 Extended Signal Peptide of Type V secretion system H4P35_21725 PF05662 Coiled stalk of trimeric autotransporter adhesin H4P35_21725 PF05658 Head domain of trimeric autotransporter adhesin H4P35_21725 PF03895 YadA-like membrane anchor domain H4P35_21725 PF03895 YadA-like membrane anchor domain H4P35_21730 PF07690 Major Facilitator Superfamily H4P35_21750 PF00378 Enoyl-CoA hydratase/isomerase H4P35_21755 PF00005 ABC transporter H4P35_21780 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain H4P35_21780 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase H4P35_21785 PF03450 CO dehydrogenase flavoprotein C-terminal domain H4P35_21785 PF00941 FAD binding domain in molybdopterin dehydrogenase H4P35_21790 PF10518 TAT (twin-arginine translocation) pathway signal sequence H4P35_21790 PF01799 [2Fe-2S] binding domain H4P35_21790 PF00111 2Fe-2S iron-sulfur cluster binding domain H4P35_21795 PF01983 Guanylyl transferase CofC like H4P35_21800 PF01627 Hpt domain H4P35_21800 PF00512 His Kinase A (phospho-acceptor) domain H4P35_21800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4P35_21800 PF00497 Bacterial extracellular solute-binding proteins, family 3 H4P35_21800 PF00072 Response regulator receiver domain H4P35_21800 PF00989 PAS fold H4P35_21805 PF01339 CheB methylesterase H4P35_21810 PF03705 CheR methyltransferase, all-alpha domain H4P35_21810 PF01739 CheR methyltransferase, SAM binding domain H4P35_21815 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) H4P35_21815 PF00072 Response regulator receiver domain H4P35_21815 PF01627 Hpt domain H4P35_21815 PF00512 His Kinase A (phospho-acceptor) domain H4P35_21815 PF00672 HAMP domain H4P35_21815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4P35_21820 PF00072 Response regulator receiver domain H4P35_21825 PF00106 short chain dehydrogenase H4P35_21830 PF07690 Major Facilitator Superfamily H4P35_21840 PF13378 Enolase C-terminal domain-like H4P35_21840 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain H4P35_21845 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_21850 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain H4P35_21850 PF13378 Enolase C-terminal domain-like H4P35_21855 PF00356 Bacterial regulatory proteins, lacI family H4P35_21865 PF00144 Beta-lactamase H4P35_21875 PF00144 Beta-lactamase H4P35_21880 PF00563 EAL domain H4P35_21880 PF01590 GAF domain H4P35_21880 PF00990 Diguanylate cyclase, GGDEF domain H4P35_21880 PF00360 Phytochrome region H4P35_21885 PF02203 Tar ligand binding domain homologue H4P35_21885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H4P35_21885 PF00672 HAMP domain H4P35_21930 PF03328 HpcH/HpaI aldolase/citrate lyase family H4P35_21935 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_21940 PF00356 Bacterial regulatory proteins, lacI family H4P35_21950 PF00815 Histidinol dehydrogenase H4P35_21960 PF13183 4Fe-4S dicluster domain H4P35_21960 PF13085 2Fe-2S iron-sulfur cluster binding domain H4P35_21975 PF00890 FAD binding domain H4P35_21975 PF02910 Fumarate reductase flavoprotein C-term H4P35_21980 PF05683 Fumarase C-terminus H4P35_21980 PF05681 Fumarate hydratase (Fumerase) H4P35_21995 PF03466 LysR substrate binding domain H4P35_21995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_22000 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_22010 PF00171 Aldehyde dehydrogenase family H4P35_22015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_22015 PF03466 LysR substrate binding domain H4P35_22020 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_22025 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain H4P35_22025 PF00205 Thiamine pyrophosphate enzyme, central domain H4P35_22025 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain H4P35_22035 PF04542 Sigma-70 region 2 H4P35_22035 PF08281 Sigma-70, region 4 H4P35_22045 PF07715 TonB-dependent Receptor Plug Domain H4P35_22045 PF00593 TonB dependent receptor H4P35_22045 PF07660 Secretin and TonB N terminus short domain H4P35_22055 PF00106 short chain dehydrogenase H4P35_22065 PF00501 AMP-binding enzyme H4P35_22075 PF00072 Response regulator receiver domain H4P35_22075 PF00486 Transcriptional regulatory protein, C terminal H4P35_22080 PF00512 His Kinase A (phospho-acceptor) domain H4P35_22080 PF08521 Two-component sensor kinase N-terminal H4P35_22080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4P35_22110 PF08212 Lipocalin-like domain H4P35_22115 PF04244 Deoxyribodipyrimidine photo-lyase-related protein H4P35_22125 PF01292 Prokaryotic cytochrome b561 H4P35_22135 PF02653 Branched-chain amino acid transport system / permease component H4P35_22145 PF00005 ABC transporter H4P35_22145 PF12399 Branched-chain amino acid ATP-binding cassette transporter H4P35_22150 PF00005 ABC transporter H4P35_22155 PF01425 Amidase H4P35_22170 PF00465 Iron-containing alcohol dehydrogenase H4P35_22180 PF07715 TonB-dependent Receptor Plug Domain H4P35_22180 PF00593 TonB dependent receptor H4P35_22190 PF03594 Benzoate membrane transport protein H4P35_22195 PF00392 Bacterial regulatory proteins, gntR family H4P35_22195 PF00155 Aminotransferase class I and II H4P35_22215 PF06715 Gp5 C-terminal repeat (3 copies) H4P35_22215 PF04717 Type VI secretion system, phage-baseplate injector H4P35_22220 PF00004 ATPase family associated with various cellular activities (AAA) H4P35_22220 PF17871 AAA lid domain H4P35_22220 PF07724 AAA domain (Cdc48 subfamily) H4P35_22220 PF10431 C-terminal, D2-small domain, of ClpB protein H4P35_22230 PF05947 Type VI secretion system, TssF H4P35_22245 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath H4P35_22250 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 H4P35_22265 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE H4P35_22275 PF06715 Gp5 C-terminal repeat (3 copies) H4P35_22275 PF04717 Type VI secretion system, phage-baseplate injector H4P35_22305 PF06715 Gp5 C-terminal repeat (3 copies) H4P35_22305 PF04717 Type VI secretion system, phage-baseplate injector H4P35_22325 PF06761 Intracellular multiplication and human macrophage-killing H4P35_22325 PF14331 ImcF-related N-terminal domain H4P35_22325 PF06744 Type VI secretion protein IcmF C-terminal H4P35_22335 PF00691 OmpA family H4P35_22335 PF04972 BON domain H4P35_22415 PF07690 Major Facilitator Superfamily H4P35_22425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_22425 PF03466 LysR substrate binding domain H4P35_22435 PF02913 FAD linked oxidases, C-terminal domain H4P35_22435 PF01565 FAD binding domain H4P35_22440 PF00884 Sulfatase H4P35_22445 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_22450 PF03466 LysR substrate binding domain H4P35_22450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_22470 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_22475 PF00206 Lyase H4P35_22475 PF14698 Argininosuccinate lyase C-terminal H4P35_22480 PF03466 LysR substrate binding domain H4P35_22480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_22490 PF00905 Penicillin binding protein transpeptidase domain H4P35_22530 PF09339 IclR helix-turn-helix domain H4P35_22535 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H4P35_22535 PF02770 Acyl-CoA dehydrogenase, middle domain H4P35_22535 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H4P35_22540 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_22545 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_22550 PF02770 Acyl-CoA dehydrogenase, middle domain H4P35_22550 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H4P35_22550 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H4P35_22555 PF08240 Alcohol dehydrogenase GroES-like domain H4P35_22555 PF00107 Zinc-binding dehydrogenase H4P35_22560 PF13607 Succinyl-CoA ligase like flavodoxin domain H4P35_22560 PF13380 CoA binding domain H4P35_22565 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_22570 PF03466 LysR substrate binding domain H4P35_22570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_22575 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_22580 PF04909 Amidohydrolase H4P35_22590 PF00166 Chaperonin 10 Kd subunit H4P35_22595 PF00118 TCP-1/cpn60 chaperonin family H4P35_22605 PF02615 Malate/L-lactate dehydrogenase H4P35_22610 PF01232 Mannitol dehydrogenase Rossmann domain H4P35_22610 PF08125 Mannitol dehydrogenase C-terminal domain H4P35_22615 PF08666 SAF domain H4P35_22615 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus H4P35_22620 PF01557 Fumarylacetoacetate (FAA) hydrolase family H4P35_22630 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component H4P35_22640 PF03480 Bacterial extracellular solute-binding protein, family 7 H4P35_22645 PF00392 Bacterial regulatory proteins, gntR family H4P35_22645 PF07729 FCD domain H4P35_22650 PF01219 Prokaryotic diacylglycerol kinase H4P35_22655 PF07992 Pyridine nucleotide-disulphide oxidoreductase H4P35_22660 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family H4P35_22665 PF02464 Competence-damaged protein H4P35_22670 PF04608 Phosphatidylglycerophosphatase A H4P35_22675 PF00586 AIR synthase related protein, N-terminal domain H4P35_22675 PF02769 AIR synthase related protein, C-terminal domain H4P35_22680 PF01029 NusB family H4P35_22685 PF00885 6,7-dimethyl-8-ribityllumazine synthase H4P35_22690 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase H4P35_22690 PF00925 GTP cyclohydrolase II H4P35_22710 PF00005 ABC transporter H4P35_22715 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_22720 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_22730 PF02881 SRP54-type protein, helical bundle domain H4P35_22730 PF00448 SRP54-type protein, GTPase domain H4P35_22740 PF01467 Cytidylyltransferase-like H4P35_22745 PF00037 4Fe-4S binding domain H4P35_22750 PF03594 Benzoate membrane transport protein H4P35_22765 PF07690 Major Facilitator Superfamily H4P35_22795 PF13296 Putative type VI secretion system Rhs element Vgr H4P35_22795 PF04717 Type VI secretion system, phage-baseplate injector H4P35_22795 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) H4P35_22800 PF06071 Protein of unknown function (DUF933) H4P35_22800 PF01926 50S ribosome-binding GTPase H4P35_22810 PF01195 Peptidyl-tRNA hydrolase H4P35_22815 PF01386 Ribosomal L25p family H4P35_22815 PF14693 Ribosomal protein TL5, C-terminal domain H4P35_22820 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase H4P35_22820 PF14572 Phosphoribosyl synthetase-associated domain H4P35_22830 PF08544 GHMP kinases C terminal H4P35_22830 PF00288 GHMP kinases N terminal domain H4P35_22835 PF00672 HAMP domain H4P35_22835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H4P35_22835 PF02203 Tar ligand binding domain homologue H4P35_22840 PF03550 Outer membrane lipoprotein LolB H4P35_22850 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain H4P35_22850 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain H4P35_22850 PF06827 Zinc finger found in FPG and IleRS H4P35_22860 PF01494 FAD binding domain H4P35_22870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_22870 PF03466 LysR substrate binding domain H4P35_22875 PF04209 homogentisate 1,2-dioxygenase H4P35_22885 PF01553 Acyltransferase H4P35_22890 PF00884 Sulfatase H4P35_22895 PF00392 Bacterial regulatory proteins, gntR family H4P35_22895 PF07729 FCD domain H4P35_22900 PF01370 NAD dependent epimerase/dehydratase family H4P35_22910 PF03480 Bacterial extracellular solute-binding protein, family 7 H4P35_22920 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component H4P35_22920 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component H4P35_22930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4P35_22930 PF00512 His Kinase A (phospho-acceptor) domain H4P35_22935 PF00486 Transcriptional regulatory protein, C terminal H4P35_22935 PF00072 Response regulator receiver domain H4P35_22940 PF02913 FAD linked oxidases, C-terminal domain H4P35_22940 PF01565 FAD binding domain H4P35_22950 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I H4P35_22950 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II H4P35_22950 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain H4P35_22950 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III H4P35_22955 PF00342 Phosphoglucose isomerase H4P35_22960 PF00534 Glycosyl transferases group 1 H4P35_22960 PF13477 Glycosyl transferase 4-like H4P35_22965 PF00534 Glycosyl transferases group 1 H4P35_22965 PF13439 Glycosyltransferase Family 4 H4P35_22970 PF13439 Glycosyltransferase Family 4 H4P35_22970 PF00534 Glycosyl transferases group 1 H4P35_22975 PF00733 Asparagine synthase H4P35_22975 PF13537 Glutamine amidotransferase domain H4P35_22980 PF13439 Glycosyltransferase Family 4 H4P35_22980 PF00534 Glycosyl transferases group 1 H4P35_22990 PF01370 NAD dependent epimerase/dehydratase family H4P35_22995 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain H4P35_22995 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain H4P35_22995 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain H4P35_23000 PF00953 Glycosyl transferase family 4 H4P35_23005 PF03232 Ubiquinone biosynthesis protein COQ7 H4P35_23015 PF00303 Thymidylate synthase H4P35_23020 PF00990 Diguanylate cyclase, GGDEF domain H4P35_23020 PF00563 EAL domain H4P35_23020 PF03707 Bacterial signalling protein N terminal repeat H4P35_23025 PF00186 Dihydrofolate reductase H4P35_23030 PF00155 Aminotransferase class I and II H4P35_23035 PF00202 Aminotransferase class-III H4P35_23040 PF00171 Aldehyde dehydrogenase family H4P35_23050 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H4P35_23055 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_23060 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_23065 PF00005 ABC transporter H4P35_23065 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H4P35_23070 PF01425 Amidase H4P35_23085 PF02347 Glycine cleavage system P-protein H4P35_23090 PF01597 Glycine cleavage H-protein H4P35_23095 PF01571 Aminomethyltransferase folate-binding domain H4P35_23095 PF08669 Glycine cleavage T-protein C-terminal barrel domain H4P35_23100 PF02535 ZIP Zinc transporter H4P35_23105 PF02777 Iron/manganese superoxide dismutases, C-terminal domain H4P35_23105 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain H4P35_23115 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain H4P35_23115 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain H4P35_23115 PF01276 Orn/Lys/Arg decarboxylase, major domain H4P35_23130 PF08448 PAS fold H4P35_23130 PF00990 Diguanylate cyclase, GGDEF domain H4P35_23140 PF00692 dUTPase H4P35_23155 PF10609 NUBPL iron-transfer P-loop NTPase H4P35_23165 PF01588 Putative tRNA binding domain H4P35_23165 PF09334 tRNA synthetases class I (M) H4P35_23170 PF00581 Rhodanese-like domain H4P35_23170 PF17773 UPF0176 acylphosphatase like domain H4P35_23200 PF02254 TrkA-N domain H4P35_23200 PF07885 Ion channel H4P35_23205 PF00563 EAL domain H4P35_23205 PF12792 CSS motif domain associated with EAL H4P35_23210 PF00440 Bacterial regulatory proteins, tetR family H4P35_23215 PF02321 Outer membrane efflux protein H4P35_23220 PF13533 Biotin-lipoyl like H4P35_23225 PF00005 ABC transporter H4P35_23245 PF01654 Cytochrome bd terminal oxidase subunit I H4P35_23250 PF02322 Cytochrome bd terminal oxidase subunit II H4P35_23260 PF00155 Aminotransferase class I and II H4P35_23260 PF00392 Bacterial regulatory proteins, gntR family H4P35_23270 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_23280 PF00890 FAD binding domain H4P35_23280 PF04205 FMN-binding domain H4P35_23280 PF03358 NADPH-dependent FMN reductase H4P35_23285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_23285 PF03466 LysR substrate binding domain H4P35_23290 PF00043 Glutathione S-transferase, C-terminal domain H4P35_23290 PF02798 Glutathione S-transferase, N-terminal domain H4P35_23310 PF02515 CoA-transferase family III H4P35_23315 PF00378 Enoyl-CoA hydratase/isomerase H4P35_23320 PF02515 CoA-transferase family III H4P35_23325 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H4P35_23325 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H4P35_23325 PF02770 Acyl-CoA dehydrogenase, middle domain H4P35_23330 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_23335 PF03466 LysR substrate binding domain H4P35_23335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_23340 PF04909 Amidohydrolase H4P35_23355 PF01613 Flavin reductase like domain H4P35_23360 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_23365 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_23370 PF17991 Thioredoxin like C-terminal domain H4P35_23370 PF02683 Cytochrome C biogenesis protein transmembrane region H4P35_23370 PF00578 AhpC/TSA family H4P35_23375 PF00578 AhpC/TSA family H4P35_23375 PF17991 Thioredoxin like C-terminal domain H4P35_23375 PF02683 Cytochrome C biogenesis protein transmembrane region H4P35_23380 PF00072 Response regulator receiver domain H4P35_23380 PF00486 Transcriptional regulatory protein, C terminal H4P35_23385 PF00672 HAMP domain H4P35_23385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4P35_23385 PF00512 His Kinase A (phospho-acceptor) domain H4P35_23390 PF01048 Phosphorylase superfamily H4P35_23395 PF02566 OsmC-like protein H4P35_23415 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_23420 PF00067 Cytochrome P450 H4P35_23430 PF08240 Alcohol dehydrogenase GroES-like domain H4P35_23430 PF00107 Zinc-binding dehydrogenase H4P35_23440 PF00171 Aldehyde dehydrogenase family H4P35_23445 PF00005 ABC transporter H4P35_23450 PF12399 Branched-chain amino acid ATP-binding cassette transporter H4P35_23450 PF00005 ABC transporter H4P35_23460 PF02653 Branched-chain amino acid transport system / permease component H4P35_23480 PF00005 ABC transporter H4P35_23485 PF00753 Metallo-beta-lactamase superfamily H4P35_23490 PF00330 Aconitase family (aconitate hydratase) H4P35_23495 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_23500 PF03466 LysR substrate binding domain H4P35_23500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_23510 PF03466 LysR substrate binding domain H4P35_23510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_23515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_23515 PF03466 LysR substrate binding domain H4P35_23525 PF12697 Alpha/beta hydrolase family H4P35_23530 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_23540 PF00330 Aconitase family (aconitate hydratase) H4P35_23540 PF00694 Aconitase C-terminal domain H4P35_23545 PF04303 PrpF protein H4P35_23550 PF00672 HAMP domain H4P35_23550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H4P35_23550 PF02203 Tar ligand binding domain homologue H4P35_23565 PF13193 AMP-binding enzyme C-terminal domain H4P35_23565 PF00501 AMP-binding enzyme H4P35_23575 PF02515 CoA-transferase family III H4P35_23580 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_23585 PF07690 Major Facilitator Superfamily H4P35_23590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_23590 PF03466 LysR substrate binding domain H4P35_23595 PF00206 Lyase H4P35_23595 PF14698 Argininosuccinate lyase C-terminal H4P35_23605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4P35_23605 PF00512 His Kinase A (phospho-acceptor) domain H4P35_23610 PF00072 Response regulator receiver domain H4P35_23610 PF00486 Transcriptional regulatory protein, C terminal H4P35_23615 PF07694 5TMR of 5TMR-LYT H4P35_23615 PF06580 Histidine kinase H4P35_23620 PF00072 Response regulator receiver domain H4P35_23620 PF04397 LytTr DNA-binding domain H4P35_23630 PF00593 TonB dependent receptor H4P35_23630 PF07715 TonB-dependent Receptor Plug Domain H4P35_23635 PF16220 Domain of unknown function (DUF4880) H4P35_23635 PF04773 FecR protein H4P35_23645 PF05853 beta-keto acid cleavage enzyme H4P35_23660 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_23665 PF01613 Flavin reductase like domain H4P35_23670 PF00296 Luciferase-like monooxygenase H4P35_23675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_23675 PF03466 LysR substrate binding domain H4P35_23685 PF00378 Enoyl-CoA hydratase/isomerase H4P35_23690 PF13607 Succinyl-CoA ligase like flavodoxin domain H4P35_23690 PF13380 CoA binding domain H4P35_23695 PF02770 Acyl-CoA dehydrogenase, middle domain H4P35_23695 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H4P35_23695 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H4P35_23705 PF00106 short chain dehydrogenase H4P35_23720 PF01425 Amidase H4P35_23725 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_23730 PF03466 LysR substrate binding domain H4P35_23730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_23735 PF00392 Bacterial regulatory proteins, gntR family H4P35_23735 PF07729 FCD domain H4P35_23740 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_23750 PF00180 Isocitrate/isopropylmalate dehydrogenase H4P35_23755 PF04909 Amidohydrolase H4P35_23760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_23760 PF03466 LysR substrate binding domain H4P35_23765 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_23770 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain H4P35_23770 PF13378 Enolase C-terminal domain-like H4P35_23775 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H4P35_23775 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain H4P35_23780 PF00005 ABC transporter H4P35_23780 PF00664 ABC transporter transmembrane region H4P35_23795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_23795 PF03466 LysR substrate binding domain H4P35_23815 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_23820 PF00682 HMGL-like H4P35_23825 PF02515 CoA-transferase family III H4P35_23830 PF03466 LysR substrate binding domain H4P35_23830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_23835 PF02390 Putative methyltransferase H4P35_23840 PF00561 alpha/beta hydrolase fold H4P35_23845 PF05690 Thiazole biosynthesis protein ThiG H4P35_23845 PF02597 ThiS family H4P35_23850 PF04972 BON domain H4P35_23850 PF01476 LysM domain H4P35_23855 PF00448 SRP54-type protein, GTPase domain H4P35_23855 PF02881 SRP54-type protein, helical bundle domain H4P35_23855 PF02978 Signal peptide binding domain H4P35_23860 PF01578 Cytochrome C assembly protein H4P35_23870 PF01510 N-acetylmuramoyl-L-alanine amidase H4P35_23875 PF13417 Glutathione S-transferase, N-terminal domain H4P35_23875 PF00043 Glutathione S-transferase, C-terminal domain H4P35_23885 PF02913 FAD linked oxidases, C-terminal domain H4P35_23885 PF01565 FAD binding domain H4P35_23890 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain H4P35_23890 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H4P35_23900 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_23905 PF01370 NAD dependent epimerase/dehydratase family H4P35_23910 PF00171 Aldehyde dehydrogenase family H4P35_23915 PF03466 LysR substrate binding domain H4P35_23915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_23920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4P35_23920 PF16736 Single Cache-like H4P35_23920 PF00989 PAS fold H4P35_23920 PF00512 His Kinase A (phospho-acceptor) domain H4P35_23935 PF09339 IclR helix-turn-helix domain H4P35_23935 PF01614 Bacterial transcriptional regulator H4P35_23940 PF05035 2-keto-3-deoxy-galactonokinase H4P35_23945 PF01081 KDPG and KHG aldolase H4P35_23950 PF13378 Enolase C-terminal domain-like H4P35_23950 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain H4P35_23955 PF07690 Major Facilitator Superfamily H4P35_23960 PF05973 Phage derived protein Gp49-like (DUF891) H4P35_23970 PF07690 Major Facilitator Superfamily H4P35_23980 PF01381 Helix-turn-helix H4P35_23985 PF00183 Hsp90 protein H4P35_23985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4P35_23990 PF00860 Permease family H4P35_24000 PF00589 Phage integrase family H4P35_24015 PF00149 Calcineurin-like phosphoesterase H4P35_24045 PF07996 Type IV secretion system proteins H4P35_24090 PF00149 Calcineurin-like phosphoesterase H4P35_24100 PF13419 Haloacid dehalogenase-like hydrolase H4P35_24115 PF00593 TonB dependent receptor H4P35_24115 PF07715 TonB-dependent Receptor Plug Domain H4P35_24130 PF03737 Aldolase/RraA H4P35_24135 PF02585 GlcNAc-PI de-N-acetylase H4P35_24140 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_24145 PF03466 LysR substrate binding domain H4P35_24145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_24150 PF00892 EamA-like transporter family H4P35_24155 PF03797 Autotransporter beta-domain H4P35_24165 PF07690 Major Facilitator Superfamily H4P35_24170 PF01979 Amidohydrolase family H4P35_24175 PF03466 LysR substrate binding domain H4P35_24175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_24180 PF00155 Aminotransferase class I and II H4P35_24185 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain H4P35_24185 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H4P35_24190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_24190 PF03466 LysR substrate binding domain H4P35_24195 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_24200 PF07969 Amidohydrolase family H4P35_24205 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_24210 PF03466 LysR substrate binding domain H4P35_24210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_24225 PF00497 Bacterial extracellular solute-binding proteins, family 3 H4P35_24230 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_24235 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H4P35_24235 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain H4P35_24245 PF00111 2Fe-2S iron-sulfur cluster binding domain H4P35_24250 PF07992 Pyridine nucleotide-disulphide oxidoreductase H4P35_24250 PF14759 Reductase C-terminal H4P35_24255 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_24265 PF00355 Rieske [2Fe-2S] domain H4P35_24265 PF00848 Ring hydroxylating alpha subunit (catalytic domain) H4P35_24275 PF05698 Bacterial trigger factor protein (TF) C-terminus H4P35_24280 PF05853 beta-keto acid cleavage enzyme H4P35_24345 PF03466 LysR substrate binding domain H4P35_24345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_24350 PF08021 Siderophore-interacting FAD-binding domain H4P35_24350 PF04954 Siderophore-interacting protein H4P35_24355 PF03551 Transcriptional regulator PadR-like family H4P35_24365 PF07690 Major Facilitator Superfamily H4P35_24370 PF03807 NADP oxidoreductase coenzyme F420-dependent H4P35_24370 PF14748 Pyrroline-5-carboxylate reductase dimerisation H4P35_24380 PF01594 AI-2E family transporter H4P35_24385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_24385 PF03466 LysR substrate binding domain H4P35_24390 PF13533 Biotin-lipoyl like H4P35_24395 PF00873 AcrB/AcrD/AcrF family H4P35_24400 PF02321 Outer membrane efflux protein H4P35_24410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_24410 PF03466 LysR substrate binding domain H4P35_24415 PF07883 Cupin domain H4P35_24420 PF01557 Fumarylacetoacetate (FAA) hydrolase family H4P35_24425 PF13417 Glutathione S-transferase, N-terminal domain H4P35_24430 PF01817 Chorismate mutase type II H4P35_24430 PF01842 ACT domain H4P35_24430 PF00800 Prephenate dehydratase H4P35_24435 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_24445 PF01494 FAD binding domain H4P35_24455 PF02653 Branched-chain amino acid transport system / permease component H4P35_24460 PF02653 Branched-chain amino acid transport system / permease component H4P35_24460 PF11862 Domain of unknown function (DUF3382) H4P35_24465 PF00005 ABC transporter H4P35_24470 PF00005 ABC transporter H4P35_24485 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_24490 PF00005 ABC transporter H4P35_24495 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_24500 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_24505 PF00497 Bacterial extracellular solute-binding proteins, family 3 H4P35_24510 PF00005 ABC transporter H4P35_24515 PF18075 FtsX extracellular domain H4P35_24520 PF03975 CheD chemotactic sensory transduction H4P35_24525 PF02834 LigT like Phosphoesterase H4P35_24530 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) H4P35_24540 PF07729 FCD domain H4P35_24540 PF00392 Bacterial regulatory proteins, gntR family H4P35_24550 PF13458 Periplasmic binding protein H4P35_24555 PF02653 Branched-chain amino acid transport system / permease component H4P35_24565 PF12399 Branched-chain amino acid ATP-binding cassette transporter H4P35_24565 PF00005 ABC transporter H4P35_24570 PF00005 ABC transporter H4P35_24580 PF00676 Dehydrogenase E1 component H4P35_24590 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) H4P35_24590 PF00364 Biotin-requiring enzyme H4P35_24590 PF02817 e3 binding domain H4P35_24595 PF07992 Pyridine nucleotide-disulphide oxidoreductase H4P35_24595 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H4P35_24600 PF03466 LysR substrate binding domain H4P35_24600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_24605 PF00920 Dehydratase family H4P35_24615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_24615 PF03466 LysR substrate binding domain H4P35_24630 PF06508 Queuosine biosynthesis protein QueC H4P35_24635 PF00311 Phosphoenolpyruvate carboxylase H4P35_24645 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain H4P35_24645 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain H4P35_24650 PF02667 Short chain fatty acid transporter H4P35_24660 PF01614 Bacterial transcriptional regulator H4P35_24660 PF09339 IclR helix-turn-helix domain H4P35_24665 PF01144 Coenzyme A transferase H4P35_24670 PF01144 Coenzyme A transferase H4P35_24675 PF02426 Muconolactone delta-isomerase H4P35_24685 PF12146 Serine aminopeptidase, S33 H4P35_24705 PF00484 Carbonic anhydrase H4P35_24710 PF00392 Bacterial regulatory proteins, gntR family H4P35_24710 PF07729 FCD domain H4P35_24725 PF02653 Branched-chain amino acid transport system / permease component H4P35_24730 PF02653 Branched-chain amino acid transport system / permease component H4P35_24730 PF11862 Domain of unknown function (DUF3382) H4P35_24735 PF12399 Branched-chain amino acid ATP-binding cassette transporter H4P35_24735 PF00005 ABC transporter H4P35_24740 PF00005 ABC transporter H4P35_24755 PF00890 FAD binding domain H4P35_24760 PF00043 Glutathione S-transferase, C-terminal domain H4P35_24760 PF13417 Glutathione S-transferase, N-terminal domain H4P35_24765 PF12833 Helix-turn-helix domain H4P35_24765 PF06719 AraC-type transcriptional regulator N-terminus H4P35_24770 PF00106 short chain dehydrogenase H4P35_24785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_24785 PF03466 LysR substrate binding domain H4P35_24795 PF01077 Nitrite and sulphite reductase 4Fe-4S domain H4P35_24795 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain H4P35_24810 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_24815 PF13193 AMP-binding enzyme C-terminal domain H4P35_24815 PF00501 AMP-binding enzyme H4P35_24830 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_24835 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain H4P35_24835 PF13378 Enolase C-terminal domain-like H4P35_24840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_24840 PF03466 LysR substrate binding domain H4P35_24845 PF03180 NLPA lipoprotein H4P35_24855 PF02441 Flavoprotein H4P35_24860 PF00462 Glutaredoxin H4P35_24865 PF05175 Methyltransferase small domain H4P35_24865 PF17827 PrmC N-terminal domain H4P35_24870 PF03462 PCRF domain H4P35_24870 PF00472 RF-1 domain H4P35_24875 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain H4P35_24875 PF01488 Shikimate / quinate 5-dehydrogenase H4P35_24875 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain H4P35_24890 PF04320 Protein with unknown function (DUF469) H4P35_24905 PF12794 Mechanosensitive ion channel inner membrane domain 1 H4P35_24905 PF00924 Mechanosensitive ion channel H4P35_24905 PF12795 Mechanosensitive ion channel porin domain H4P35_24910 PF01037 Lrp/AsnC ligand binding domain H4P35_24915 PF01810 LysE type translocator H4P35_24920 PF00892 EamA-like transporter family H4P35_24925 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_24930 PF01261 Xylose isomerase-like TIM barrel H4P35_24935 PF07715 TonB-dependent Receptor Plug Domain H4P35_24935 PF00593 TonB dependent receptor H4P35_24945 PF07683 Cobalamin synthesis protein cobW C-terminal domain H4P35_24945 PF02492 CobW/HypB/UreG, nucleotide-binding domain H4P35_24950 PF01979 Amidohydrolase family H4P35_24950 PF13382 Adenine deaminase C-terminal domain H4P35_24955 PF01979 Amidohydrolase family H4P35_24960 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_24965 PF08402 TOBE domain H4P35_24965 PF00005 ABC transporter H4P35_24970 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_24990 PF01040 UbiA prenyltransferase family H4P35_25000 PF02627 Carboxymuconolactone decarboxylase family H4P35_25025 PF00544 Pectate lyase H4P35_25055 PF00534 Glycosyl transferases group 1 H4P35_25065 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain H4P35_25065 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain H4P35_25065 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain H4P35_25075 PF00348 Polyprenyl synthetase H4P35_25085 PF01614 Bacterial transcriptional regulator H4P35_25085 PF09339 IclR helix-turn-helix domain H4P35_25090 PF00829 Ribosomal prokaryotic L21 protein H4P35_25095 PF01016 Ribosomal L27 protein H4P35_25100 PF01018 GTP1/OBG H4P35_25100 PF01926 50S ribosome-binding GTPase H4P35_25105 PF00696 Amino acid kinase family H4P35_25105 PF01472 PUA domain H4P35_25120 PF02355 Protein export membrane protein H4P35_25125 PF13667 ThiC-associated domain H4P35_25125 PF01964 Radical SAM ThiC family H4P35_25130 PF02913 FAD linked oxidases, C-terminal domain H4P35_25130 PF01565 FAD binding domain H4P35_25135 PF07729 FCD domain H4P35_25135 PF00392 Bacterial regulatory proteins, gntR family H4P35_25140 PF03707 Bacterial signalling protein N terminal repeat H4P35_25140 PF00990 Diguanylate cyclase, GGDEF domain H4P35_25140 PF00563 EAL domain H4P35_25145 PF00899 ThiF family H4P35_25150 PF13180 PDZ domain H4P35_25150 PF03572 Peptidase family S41 H4P35_25155 PF01551 Peptidase family M23 H4P35_25160 PF00300 Histidine phosphatase superfamily (branch 1) H4P35_25165 PF17773 UPF0176 acylphosphatase like domain H4P35_25165 PF12368 Rhodanase C-terminal H4P35_25165 PF00581 Rhodanese-like domain H4P35_25170 PF00462 Glutaredoxin H4P35_25175 PF02556 Preprotein translocase subunit SecB H4P35_25180 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus H4P35_25180 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus H4P35_25185 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_25190 PF00588 SpoU rRNA Methylase family H4P35_25195 PF00156 Phosphoribosyl transferase domain H4P35_25200 PF08241 Methyltransferase domain H4P35_25205 PF04107 Glutamate-cysteine ligase family 2(GCS2) H4P35_25210 PF02386 Cation transport protein H4P35_25215 PF02254 TrkA-N domain H4P35_25215 PF02080 TrkA-C domain H4P35_25220 PF02954 Bacterial regulatory protein, Fis family H4P35_25220 PF00072 Response regulator receiver domain H4P35_25220 PF00158 Sigma-54 interaction domain H4P35_25225 PF00672 HAMP domain H4P35_25225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4P35_25225 PF00512 His Kinase A (phospho-acceptor) domain H4P35_25225 PF00989 PAS fold H4P35_25235 PF01189 16S rRNA methyltransferase RsmB/F H4P35_25235 PF01029 NusB family H4P35_25240 PF01810 LysE type translocator H4P35_25255 PF02463 RecF/RecN/SMC N terminal domain H4P35_25265 PF04055 Radical SAM superfamily H4P35_25265 PF18693 TRAM domain H4P35_25265 PF00919 Uncharacterized protein family UPF0004 H4P35_25275 PF03641 Possible lysine decarboxylase H4P35_25285 PF13419 Haloacid dehalogenase-like hydrolase H4P35_25300 PF00551 Formyl transferase H4P35_25300 PF02911 Formyl transferase, C-terminal domain H4P35_25305 PF01327 Polypeptide deformylase H4P35_25310 PF17782 DprA winged helix domain H4P35_25310 PF02481 DNA recombination-mediator protein A H4P35_25315 PF00682 HMGL-like H4P35_25325 PF00497 Bacterial extracellular solute-binding proteins, family 3 H4P35_25330 PF00155 Aminotransferase class I and II H4P35_25335 PF01168 Alanine racemase, N-terminal domain H4P35_25340 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_25345 PF00011 Hsp20/alpha crystallin family H4P35_25350 PF00011 Hsp20/alpha crystallin family H4P35_25360 PF09335 SNARE associated Golgi protein H4P35_25365 PF00585 C-terminal regulatory domain of Threonine dehydratase H4P35_25365 PF00291 Pyridoxal-phosphate dependent enzyme H4P35_25370 PF13609 Gram-negative porin H4P35_25380 PF03466 LysR substrate binding domain H4P35_25380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_25385 PF00156 Phosphoribosyl transferase domain H4P35_25390 PF00664 ABC transporter transmembrane region H4P35_25390 PF00005 ABC transporter H4P35_25395 PF00664 ABC transporter transmembrane region H4P35_25395 PF00005 ABC transporter H4P35_25400 PF08173 Membrane bound YbgT-like protein H4P35_25405 PF02322 Cytochrome bd terminal oxidase subunit II H4P35_25410 PF01654 Cytochrome bd terminal oxidase subunit I H4P35_25420 PF02222 ATP-grasp domain H4P35_25425 PF00571 CBS domain H4P35_25425 PF01380 SIS domain H4P35_25445 PF00005 ABC transporter H4P35_25450 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein H4P35_25455 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 H4P35_25460 PF07475 HPr Serine kinase C-terminal domain H4P35_25460 PF02603 HPr Serine kinase N terminus H4P35_25465 PF00392 Bacterial regulatory proteins, gntR family H4P35_25465 PF00155 Aminotransferase class I and II H4P35_25470 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase H4P35_25470 PF13442 Cytochrome C oxidase, cbb3-type, subunit III H4P35_25470 PF00034 Cytochrome c H4P35_25480 PF03668 P-loop ATPase protein family H4P35_25485 PF03330 Lytic transglycolase H4P35_25485 PF05036 Sporulation related domain H4P35_25490 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain H4P35_25490 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain H4P35_25495 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases H4P35_25500 PF02021 Uncharacterised protein family UPF0102 H4P35_25505 PF13580 SIS domain H4P35_25510 PF04972 BON domain H4P35_25515 PF00578 AhpC/TSA family H4P35_25520 PF03180 NLPA lipoprotein H4P35_25525 PF00696 Amino acid kinase family H4P35_25535 PF00440 Bacterial regulatory proteins, tetR family H4P35_25540 PF00939 Sodium:sulfate symporter transmembrane region H4P35_25545 PF02615 Malate/L-lactate dehydrogenase H4P35_25555 PF01098 Cell cycle protein H4P35_25560 PF00905 Penicillin binding protein transpeptidase domain H4P35_25560 PF03717 Penicillin-binding Protein dimerisation domain H4P35_25570 PF04085 rod shape-determining protein MreC H4P35_25580 PF02686 Glu-tRNAGln amidotransferase C subunit H4P35_25585 PF01425 Amidase H4P35_25590 PF02637 GatB domain H4P35_25590 PF02934 GatB/GatE catalytic domain H4P35_25605 PF00156 Phosphoribosyl transferase domain H4P35_25610 PF03372 Endonuclease/Exonuclease/phosphatase family H4P35_25615 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase H4P35_25615 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain H4P35_25625 PF03466 LysR substrate binding domain H4P35_25625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_25630 PF01810 LysE type translocator H4P35_25635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_25635 PF03466 LysR substrate binding domain H4P35_25640 PF13458 Periplasmic binding protein H4P35_25650 PF12399 Branched-chain amino acid ATP-binding cassette transporter H4P35_25650 PF00005 ABC transporter H4P35_25655 PF00005 ABC transporter H4P35_25660 PF00872 Transposase, Mutator family H4P35_25665 PF02566 OsmC-like protein H4P35_25670 PF01047 MarR family H4P35_25680 PF00501 AMP-binding enzyme H4P35_25685 PF00005 ABC transporter H4P35_25685 PF12399 Branched-chain amino acid ATP-binding cassette transporter H4P35_25690 PF02653 Branched-chain amino acid transport system / permease component H4P35_25705 PF00005 ABC transporter H4P35_25710 PF14535 AMP-binding enzyme C-terminal domain H4P35_25710 PF00501 AMP-binding enzyme H4P35_25720 PF04143 Sulphur transport H4P35_25730 PF00753 Metallo-beta-lactamase superfamily H4P35_25735 PF03976 Polyphosphate kinase 2 (PPK2) H4P35_25750 PF00534 Glycosyl transferases group 1 H4P35_25750 PF13439 Glycosyltransferase Family 4 H4P35_25755 PF04343 Protein of unknown function, DUF488 H4P35_25760 PF03070 TENA/THI-4/PQQC family H4P35_25760 PF02581 Thiamine monophosphate synthase H4P35_25760 PF08543 Phosphomethylpyrimidine kinase H4P35_25765 PF03167 Uracil DNA glycosylase superfamily H4P35_25770 PF00271 Helicase conserved C-terminal domain H4P35_25770 PF00270 DEAD/DEAH box helicase H4P35_25780 PF12627 Probable RNA and SrmB- binding site of polymerase A H4P35_25780 PF01743 Poly A polymerase head domain H4P35_25785 PF01464 Transglycosylase SLT domain H4P35_25785 PF14718 Soluble lytic murein transglycosylase L domain H4P35_25790 PF01812 5-formyltetrahydrofolate cyclo-ligase family H4P35_25795 PF14403 Circularly permuted ATP-grasp type 2 H4P35_25815 PF00378 Enoyl-CoA hydratase/isomerase H4P35_25825 PF02515 CoA-transferase family III H4P35_25845 PF01408 Oxidoreductase family, NAD-binding Rossmann fold H4P35_25845 PF02894 Oxidoreductase family, C-terminal alpha/beta domain H4P35_25850 PF00356 Bacterial regulatory proteins, lacI family H4P35_25855 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_25880 PF02219 Methylenetetrahydrofolate reductase H4P35_25885 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV H4P35_25890 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain H4P35_25890 PF05221 S-adenosyl-L-homocysteine hydrolase H4P35_25895 PF13439 Glycosyltransferase Family 4 H4P35_25895 PF00534 Glycosyl transferases group 1 H4P35_25905 PF00561 alpha/beta hydrolase fold H4P35_25910 PF00694 Aconitase C-terminal domain H4P35_25915 PF00330 Aconitase family (aconitate hydratase) H4P35_25920 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_25925 PF03466 LysR substrate binding domain H4P35_25925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_25930 PF01613 Flavin reductase like domain H4P35_25945 PF13458 Periplasmic binding protein H4P35_25955 PF00005 ABC transporter H4P35_25965 PF00083 Sugar (and other) transporter H4P35_25970 PF01425 Amidase H4P35_25975 PF02773 S-adenosylmethionine synthetase, C-terminal domain H4P35_25975 PF02772 S-adenosylmethionine synthetase, central domain H4P35_25975 PF00438 S-adenosylmethionine synthetase, N-terminal domain H4P35_25985 PF03279 Bacterial lipid A biosynthesis acyltransferase H4P35_25990 PF01678 Diaminopimelate epimerase H4P35_26000 PF02899 Phage integrase, N-terminal SAM-like domain H4P35_26000 PF00589 Phage integrase family H4P35_26005 PF03824 High-affinity nickel-transport protein H4P35_26015 PF01297 Zinc-uptake complex component A periplasmic H4P35_26020 PF00950 ABC 3 transport family H4P35_26025 PF00005 ABC transporter H4P35_26035 PF01475 Ferric uptake regulator family H4P35_26040 PF02492 CobW/HypB/UreG, nucleotide-binding domain H4P35_26040 PF07683 Cobalamin synthesis protein cobW C-terminal domain H4P35_26045 PF01258 Prokaryotic dksA/traR C4-type zinc finger H4P35_26050 PF00227 Proteasome subunit H4P35_26055 PF00004 ATPase family associated with various cellular activities (AAA) H4P35_26055 PF07724 AAA domain (Cdc48 subfamily) H4P35_26065 PF01923 Cobalamin adenosyltransferase H4P35_26070 PF04321 RmlD substrate binding domain H4P35_26075 PF04055 Radical SAM superfamily H4P35_26075 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family H4P35_26080 PF00356 Bacterial regulatory proteins, lacI family H4P35_26090 PF03099 Biotin/lipoate A/B protein ligase family H4P35_26095 PF04359 Protein of unknown function (DUF493) H4P35_26100 PF01063 Amino-transferase class IV H4P35_26105 PF07943 Penicillin-binding protein 5, C-terminal domain H4P35_26105 PF00768 D-alanyl-D-alanine carboxypeptidase H4P35_26125 PF00005 ABC transporter H4P35_26130 PF02405 Permease MlaE H4P35_26140 PF03309 Type III pantothenate kinase H4P35_26150 PF00534 Glycosyl transferases group 1 H4P35_26150 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) H4P35_26155 PF01075 Glycosyltransferase family 9 (heptosyltransferase) H4P35_26165 PF02719 Polysaccharide biosynthesis protein H4P35_26175 PF00953 Glycosyl transferase family 4 H4P35_26180 PF02350 UDP-N-acetylglucosamine 2-epimerase H4P35_26185 PF02719 Polysaccharide biosynthesis protein H4P35_26185 PF08485 Polysaccharide biosynthesis protein C-terminal H4P35_26190 PF04321 RmlD substrate binding domain H4P35_26210 PF01757 Acyltransferase family H4P35_26215 PF00534 Glycosyl transferases group 1 H4P35_26215 PF13439 Glycosyltransferase Family 4 H4P35_26220 PF02527 rRNA small subunit methyltransferase G H4P35_26225 PF00005 ABC transporter H4P35_26240 PF07690 Major Facilitator Superfamily H4P35_26245 PF00892 EamA-like transporter family H4P35_26250 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase H4P35_26255 PF00483 Nucleotidyl transferase H4P35_26260 PF16363 GDP-mannose 4,6 dehydratase H4P35_26265 PF13091 PLD-like domain H4P35_26270 PF03372 Endonuclease/Exonuclease/phosphatase family H4P35_26275 PF02938 GAD domain H4P35_26275 PF01336 OB-fold nucleic acid binding domain H4P35_26275 PF00152 tRNA synthetases class II (D, K and N) H4P35_26300 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III H4P35_26300 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal H4P35_26315 PF00701 Dihydrodipicolinate synthetase family H4P35_26320 PF13185 GAF domain H4P35_26325 PF00155 Aminotransferase class I and II H4P35_26330 PF01040 UbiA prenyltransferase family H4P35_26350 PF07729 FCD domain H4P35_26350 PF00392 Bacterial regulatory proteins, gntR family H4P35_26355 PF01274 Malate synthase H4P35_26390 PF13378 Enolase C-terminal domain-like H4P35_26395 PF03466 LysR substrate binding domain H4P35_26395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_26410 PF01943 Polysaccharide biosynthesis protein H4P35_26410 PF14667 Polysaccharide biosynthesis C-terminal domain H4P35_26430 PF00535 Glycosyl transferase family 2 H4P35_26435 PF00436 Single-strand binding protein family H4P35_26440 PF07690 Major Facilitator Superfamily H4P35_26445 PF17760 UvrA interaction domain H4P35_26445 PF17755 UvrA DNA-binding domain H4P35_26450 PF14497 Glutathione S-transferase, C-terminal domain H4P35_26450 PF02798 Glutathione S-transferase, N-terminal domain H4P35_26455 PF13286 Phosphohydrolase-associated domain H4P35_26455 PF01966 HD domain H4P35_26460 PF01761 3-dehydroquinate synthase H4P35_26465 PF01202 Shikimate kinase H4P35_26470 PF00912 Transglycosylase H4P35_26470 PF00905 Penicillin binding protein transpeptidase domain H4P35_26470 PF17092 Penicillin-binding protein OB-like domain H4P35_26475 PF01491 Frataxin-like domain H4P35_26480 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain H4P35_26480 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain H4P35_26485 PF01578 Cytochrome C assembly protein H4P35_26490 PF05140 ResB-like family H4P35_26500 PF01926 50S ribosome-binding GTPase H4P35_26505 PF00490 Delta-aminolevulinic acid dehydratase H4P35_26515 PF11412 Disulphide bond corrector protein DsbC H4P35_26515 PF02683 Cytochrome C biogenesis protein transmembrane region H4P35_26520 PF03091 CutA1 divalent ion tolerance protein H4P35_26525 PF01230 HIT domain H4P35_26530 PF01196 Ribosomal protein L17 H4P35_26535 PF01000 RNA polymerase Rpb3/RpoA insert domain H4P35_26535 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain H4P35_26535 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain H4P35_26540 PF01479 S4 domain H4P35_26540 PF00163 Ribosomal protein S4/S9 N-terminal domain H4P35_26545 PF00411 Ribosomal protein S11 H4P35_26550 PF00416 Ribosomal protein S13/S18 H4P35_26555 PF00444 Ribosomal protein L36 H4P35_26560 PF01176 Translation initiation factor 1A / IF-1 H4P35_26565 PF00344 SecY translocase H4P35_26570 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A H4P35_26575 PF00327 Ribosomal protein L30p/L7e H4P35_26580 PF00333 Ribosomal protein S5, N-terminal domain H4P35_26580 PF03719 Ribosomal protein S5, C-terminal domain H4P35_26585 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast H4P35_26590 PF00347 Ribosomal protein L6 H4P35_26595 PF00410 Ribosomal protein S8 H4P35_26600 PF00253 Ribosomal protein S14p/S29e H4P35_26605 PF00673 ribosomal L5P family C-terminus H4P35_26605 PF00281 Ribosomal protein L5 H4P35_26610 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 H4P35_26615 PF00238 Ribosomal protein L14p/L23e H4P35_26625 PF00171 Aldehyde dehydrogenase family H4P35_26635 PF14525 AraC-binding-like domain H4P35_26635 PF12833 Helix-turn-helix domain H4P35_26650 PF00005 ABC transporter H4P35_26650 PF12399 Branched-chain amino acid ATP-binding cassette transporter H4P35_26655 PF00005 ABC transporter H4P35_26665 PF11862 Domain of unknown function (DUF3382) H4P35_26665 PF02653 Branched-chain amino acid transport system / permease component H4P35_26675 PF00366 Ribosomal protein S17 H4P35_26680 PF00831 Ribosomal L29 protein H4P35_26685 PF00252 Ribosomal protein L16p/L10e H4P35_26690 PF00189 Ribosomal protein S3, C-terminal domain H4P35_26690 PF07650 KH domain H4P35_26695 PF00237 Ribosomal protein L22p/L17e H4P35_26700 PF00203 Ribosomal protein S19 H4P35_26705 PF03947 Ribosomal Proteins L2, C-terminal domain H4P35_26705 PF00181 Ribosomal Proteins L2, RNA binding domain H4P35_26710 PF00276 Ribosomal protein L23 H4P35_26715 PF00573 Ribosomal protein L4/L1 family H4P35_26720 PF00297 Ribosomal protein L3 H4P35_26725 PF00338 Ribosomal protein S10p/S20e H4P35_26730 PF03143 Elongation factor Tu C-terminal domain H4P35_26730 PF03144 Elongation factor Tu domain 2 H4P35_26730 PF00009 Elongation factor Tu GTP binding domain H4P35_26735 PF14492 Elongation Factor G, domain II H4P35_26735 PF03764 Elongation factor G, domain IV H4P35_26735 PF00679 Elongation factor G C-terminus H4P35_26735 PF00009 Elongation factor Tu GTP binding domain H4P35_26735 PF03144 Elongation factor Tu domain 2 H4P35_26740 PF00177 Ribosomal protein S7p/S5e H4P35_26745 PF00164 Ribosomal protein S12/S23 H4P35_26750 PF00072 Response regulator receiver domain H4P35_26750 PF00486 Transcriptional regulatory protein, C terminal H4P35_26755 PF00072 Response regulator receiver domain H4P35_26755 PF00486 Transcriptional regulatory protein, C terminal H4P35_26765 PF00512 His Kinase A (phospho-acceptor) domain H4P35_26765 PF18698 Histidine kinase sensor domain H4P35_26765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4P35_26765 PF00672 HAMP domain H4P35_26780 PF04983 RNA polymerase Rpb1, domain 3 H4P35_26780 PF04998 RNA polymerase Rpb1, domain 5 H4P35_26780 PF04997 RNA polymerase Rpb1, domain 1 H4P35_26780 PF00623 RNA polymerase Rpb1, domain 2 H4P35_26780 PF05000 RNA polymerase Rpb1, domain 4 H4P35_26785 PF00562 RNA polymerase Rpb2, domain 6 H4P35_26785 PF04560 RNA polymerase Rpb2, domain 7 H4P35_26785 PF10385 RNA polymerase beta subunit external 1 domain H4P35_26785 PF04565 RNA polymerase Rpb2, domain 3 H4P35_26785 PF04561 RNA polymerase Rpb2, domain 2 H4P35_26785 PF04563 RNA polymerase beta subunit H4P35_26790 PF00542 Ribosomal protein L7/L12 C-terminal domain H4P35_26790 PF16320 Ribosomal protein L7/L12 dimerisation domain H4P35_26795 PF00466 Ribosomal protein L10 H4P35_26800 PF00687 Ribosomal protein L1p/L10e family H4P35_26805 PF00298 Ribosomal protein L11, RNA binding domain H4P35_26805 PF03946 Ribosomal protein L11, N-terminal domain H4P35_26810 PF00467 KOW motif H4P35_26810 PF02357 Transcription termination factor nusG H4P35_26825 PF03144 Elongation factor Tu domain 2 H4P35_26825 PF03143 Elongation factor Tu C-terminal domain H4P35_26825 PF00009 Elongation factor Tu GTP binding domain H4P35_26845 PF00465 Iron-containing alcohol dehydrogenase H4P35_26850 PF00171 Aldehyde dehydrogenase family H4P35_26855 PF03951 Glutamine synthetase, beta-Grasp domain H4P35_26855 PF00120 Glutamine synthetase, catalytic domain H4P35_26860 PF00459 Inositol monophosphatase family H4P35_26865 PF03401 Tripartite tricarboxylate transporter family receptor H4P35_26875 PF01053 Cys/Met metabolism PLP-dependent enzyme H4P35_26885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4P35_26885 PF03466 LysR substrate binding domain H4P35_26890 PF00710 Asparaginase, N-terminal H4P35_26890 PF17763 Glutaminase/Asparaginase C-terminal domain H4P35_26895 PF02195 ParB-like nuclease domain H4P35_26895 PF17762 HTH domain found in ParB protein H4P35_26905 PF13614 AAA domain H4P35_26910 PF02527 rRNA small subunit methyltransferase G H4P35_26915 PF13932 GidA associated domain H4P35_26915 PF01134 Glucose inhibited division protein A H4P35_26925 PF00313 'Cold-shock' DNA-binding domain H4P35_26930 PF05145 Transition state regulatory protein AbrB H4P35_26935 PF00155 Aminotransferase class I and II H4P35_26940 PF01970 Tripartite tricarboxylate transporter TctA family H4P35_26955 PF00512 His Kinase A (phospho-acceptor) domain H4P35_26955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4P35_26955 PF00672 HAMP domain H4P35_26960 PF00486 Transcriptional regulatory protein, C terminal H4P35_26960 PF00072 Response regulator receiver domain H4P35_26965 PF00654 Voltage gated chloride channel H4P35_27000 PF12631 MnmE helical domain H4P35_27000 PF01926 50S ribosome-binding GTPase H4P35_27000 PF10396 GTP-binding protein TrmE N-terminus H4P35_27005 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H4P35_27010 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_27015 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_27015 PF12911 N-terminal TM domain of oligopeptide transport permease C H4P35_27020 PF00005 ABC transporter H4P35_27020 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H4P35_27025 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H4P35_27025 PF00005 ABC transporter H4P35_27030 PF07687 Peptidase dimerisation domain H4P35_27030 PF01546 Peptidase family M20/M25/M40 H4P35_27035 PF02668 Taurine catabolism dioxygenase TauD, TfdA family H4P35_27045 PF00005 ABC transporter H4P35_27050 PF00528 Binding-protein-dependent transport system inner membrane component H4P35_27055 PF00199 Catalase H4P35_27055 PF06628 Catalase-related immune-responsive H4P35_27060 PF02096 60Kd inner membrane protein H4P35_27060 PF14849 YidC periplasmic domain H4P35_27065 PF01809 Putative membrane protein insertion efficiency factor H4P35_27070 PF00825 Ribonuclease P H4P35_27075 PF00468 Ribosomal protein L34