C2U31_00015	SM00382	ATPases associated with a variety of cellular activities
C2U31_00030	SM00860	SMI1 / KNR4 family
C2U31_00035	SM00869	Autotransporter beta-domain
C2U31_00040	SM00880	C2U31_00040
C2U31_00040	SM01118	C2U31_00040
C2U31_00045	SM00382	ATPases associated with a variety of cellular activities
C2U31_00045	SM00962	SRP54-type protein, GTPase domain
C2U31_00045	SM00963	SRP54-type protein, helical bundle domain
C2U31_00080	SM00530	Helix-turn-helix XRE-family like proteins 
C2U31_00130	SM01400	C2U31_00130
C2U31_00145	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U31_00145	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U31_00160	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
C2U31_00160	SM01232	C2U31_00160
C2U31_00165	SM00849	Metallo-beta-lactamase superfamily
C2U31_00195	SM00563	Phosphate acyltransferases
C2U31_00205	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_00205	SM00895	C2U31_00205
C2U31_00215	SM00387	Histidine kinase-like ATPases
C2U31_00215	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_00220	SM00448	cheY-homologous receiver domain
C2U31_00220	SM00862	Transcriptional regulatory protein, C terminal
C2U31_00280	SM00984	UDP binding domain
C2U31_00305	SM00052	Putative diguanylate phosphodiesterase
C2U31_00305	SM00267	diguanylate cyclase
C2U31_00315	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_00350	SM00382	ATPases associated with a variety of cellular activities
C2U31_00435	SM00267	diguanylate cyclase
C2U31_00475	SM00450	Rhodanese Homology Domain
C2U31_00495	SM00530	Helix-turn-helix XRE-family like proteins 
C2U31_00500	SM00862	Transcriptional regulatory protein, C terminal
C2U31_00515	SM00530	Helix-turn-helix XRE-family like proteins 
C2U31_00530	SM00052	Putative diguanylate phosphodiesterase
C2U31_00555	SM00382	ATPases associated with a variety of cellular activities
C2U31_00570	SM00822	C2U31_00570
C2U31_00605	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_00645	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_00645	SM00895	C2U31_00645
C2U31_00685	SM01007	Class II Aldolase and Adducin N-terminal domain
C2U31_00700	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_00725	SM00984	UDP binding domain
C2U31_00765	SM00656	C2U31_00765
C2U31_00805	SM00530	Helix-turn-helix XRE-family like proteins 
C2U31_00825	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
C2U31_00875	SM00382	ATPases associated with a variety of cellular activities
C2U31_00880	SM00155	Phospholipase D. Active site motifs.
C2U31_00885	SM00382	ATPases associated with a variety of cellular activities
C2U31_00885	SM01086	C-terminal, D2-small domain, of ClpB protein
C2U31_00965	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
C2U31_00965	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
C2U31_00965	SM00493	C2U31_00965
C2U31_01045	SM00487	DEAD-like helicases superfamily
C2U31_01090	SM00530	Helix-turn-helix XRE-family like proteins 
C2U31_01220	SM00966	SpoVT / AbrB like domain 
C2U31_01230	SM00530	Helix-turn-helix XRE-family like proteins 
C2U31_01305	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_01310	SM00257	Lysin motif
C2U31_01315	SM00382	ATPases associated with a variety of cellular activities
C2U31_01315	SM00962	SRP54-type protein, GTPase domain
C2U31_01315	SM00963	SRP54-type protein, helical bundle domain
C2U31_01330	SM00644	C2U31_01330
C2U31_01340	SM00346	helix_turn_helix isocitrate lyase regulation
C2U31_01355	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
C2U31_01400	SM00487	DEAD-like helicases superfamily
C2U31_01405	SM00387	Histidine kinase-like ATPases
C2U31_01445	SM00530	Helix-turn-helix XRE-family like proteins 
C2U31_01450	SM00062	Bacterial periplasmic substrate-binding proteins
C2U31_01465	SM00382	ATPases associated with a variety of cellular activities
C2U31_01470	SM00382	ATPases associated with a variety of cellular activities
C2U31_01485	SM00382	ATPases associated with a variety of cellular activities
C2U31_01525	SM00232	JAB/MPN domain
C2U31_01600	SM00382	ATPases associated with a variety of cellular activities
C2U31_01710	SM00530	Helix-turn-helix XRE-family like proteins 
C2U31_01785	SM00530	Helix-turn-helix XRE-family like proteins 
C2U31_01870	SM00869	Autotransporter beta-domain
C2U31_01875	SM00858	C2U31_01875
C2U31_01880	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_01880	SM00895	C2U31_01880
C2U31_01885	SM00822	C2U31_01885
C2U31_01910	SM00382	ATPases associated with a variety of cellular activities
C2U31_01915	SM00382	ATPases associated with a variety of cellular activities
C2U31_01920	SM00822	C2U31_01920
C2U31_01925	SM00861	Transketolase, pyrimidine binding domain
C2U31_01990	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_02020	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_02020	SM00895	C2U31_02020
C2U31_02055	SM01130	C2U31_02055
C2U31_02095	SM00965	Secretin and TonB N terminus short domain
C2U31_02120	SM00346	helix_turn_helix isocitrate lyase regulation
C2U31_02125	SM00882	Coenzyme A transferase
C2U31_02130	SM00882	Coenzyme A transferase
C2U31_02165	SM00947	Carbonic anhydrase
C2U31_02205	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_02205	SM00895	C2U31_02205
C2U31_02230	SM00382	ATPases associated with a variety of cellular activities
C2U31_02235	SM00382	ATPases associated with a variety of cellular activities
C2U31_02240	SM00822	C2U31_02240
C2U31_02245	SM00822	C2U31_02245
C2U31_02340	SM00937	C2U31_02340
C2U31_02435	SM00344	helix_turn_helix ASNC type
C2U31_02505	SM00382	ATPases associated with a variety of cellular activities
C2U31_02510	SM00382	ATPases associated with a variety of cellular activities
C2U31_02520	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_02520	SM00895	C2U31_02520
C2U31_02550	SM01007	Class II Aldolase and Adducin N-terminal domain
C2U31_02560	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_02565	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_02565	SM00895	C2U31_02565
C2U31_02570	SM01130	C2U31_02570
C2U31_02585	SM00869	Autotransporter beta-domain
C2U31_02610	SM00346	helix_turn_helix isocitrate lyase regulation
C2U31_02630	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
C2U31_02635	SM00862	Transcriptional regulatory protein, C terminal
C2U31_02640	SM00530	Helix-turn-helix XRE-family like proteins 
C2U31_02660	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_02660	SM00895	C2U31_02660
C2U31_02665	SM00267	diguanylate cyclase
C2U31_02675	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
C2U31_02675	SM00245	tail specific protease
C2U31_02685	SM00855	Phosphoglycerate mutase family
C2U31_02690	SM00450	Rhodanese Homology Domain
C2U31_02745	SM00448	cheY-homologous receiver domain
C2U31_02750	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U31_02750	SM00387	Histidine kinase-like ATPases
C2U31_02750	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_02800	SM00421	helix_turn_helix, Lux Regulon
C2U31_02800	SM00448	cheY-homologous receiver domain
C2U31_02805	SM00387	Histidine kinase-like ATPases
C2U31_02805	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_02805	SM00448	cheY-homologous receiver domain
C2U31_02810	SM00052	Putative diguanylate phosphodiesterase
C2U31_02810	SM00448	cheY-homologous receiver domain
C2U31_02835	SM00729	Elongator protein 3, MiaB family, Radical SAM
C2U31_02870	SM01118	C2U31_02870
C2U31_02900	SM00062	Bacterial periplasmic substrate-binding proteins
C2U31_02965	SM00382	ATPases associated with a variety of cellular activities
C2U31_02970	SM00382	ATPases associated with a variety of cellular activities
C2U31_03020	SM00382	ATPases associated with a variety of cellular activities
C2U31_03040	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_03085	SM00749	bacterial OsmY and nodulation domain
C2U31_03175	SM00845	GatB domain
C2U31_03205	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
C2U31_03240	SM00382	ATPases associated with a variety of cellular activities
C2U31_03245	SM00382	ATPases associated with a variety of cellular activities
C2U31_03255	SM00347	helix_turn_helix multiple antibiotic resistance protein
C2U31_03270	SM00382	ATPases associated with a variety of cellular activities
C2U31_03290	SM00382	ATPases associated with a variety of cellular activities
C2U31_03320	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
C2U31_03325	SM00849	Metallo-beta-lactamase superfamily
C2U31_03380	SM00646	C2U31_03380
C2U31_03400	SM00912	haemagglutination activity domain
C2U31_03410	SM00986	Uracil DNA glycosylase superfamily
C2U31_03410	SM00987	UreE urease accessory protein, C-terminal domain 
C2U31_03415	SM00487	DEAD-like helicases superfamily
C2U31_03415	SM00490	helicase superfamily c-terminal domain
C2U31_03420	SM00346	helix_turn_helix isocitrate lyase regulation
C2U31_03435	SM00859	Semialdehyde dehydrogenase, NAD binding domain
C2U31_03470	SM00460	Transglutaminase/protease-like homologues
C2U31_03490	SM00996	S-adenosyl-L-homocysteine hydrolase
C2U31_03490	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
C2U31_03505	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_03535	SM00062	Bacterial periplasmic substrate-binding proteins
C2U31_03550	SM00344	helix_turn_helix ASNC type
C2U31_03650	SM00382	ATPases associated with a variety of cellular activities
C2U31_03660	SM00833	Cobalamin synthesis protein cobW C-terminal domain
C2U31_03675	SM00382	ATPases associated with a variety of cellular activities
C2U31_03675	SM01086	C-terminal, D2-small domain, of ClpB protein
C2U31_03740	SM00382	ATPases associated with a variety of cellular activities
C2U31_03800	SM01007	Class II Aldolase and Adducin N-terminal domain
C2U31_03850	SM00729	Elongator protein 3, MiaB family, Radical SAM
C2U31_03860	SM00671	Sel1-like repeats.
C2U31_03880	SM00936	Penicillin-binding protein 5, C-terminal domain 
C2U31_03900	SM00382	ATPases associated with a variety of cellular activities
C2U31_03940	SM00822	C2U31_03940
C2U31_03965	SM00382	ATPases associated with a variety of cellular activities
C2U31_04000	SM00155	Phospholipase D. Active site motifs.
C2U31_04020	SM00834	Putative regulatory protein
C2U31_04050	SM01130	C2U31_04050
C2U31_04055	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
C2U31_04085	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_04085	SM00895	C2U31_04085
C2U31_04165	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C2U31_04185	SM01219	C2U31_04185
C2U31_04215	SM01004	Delta-aminolevulinic acid dehydratase
C2U31_04225	SM00382	ATPases associated with a variety of cellular activities
C2U31_04230	SM00382	ATPases associated with a variety of cellular activities
C2U31_04255	SM00346	helix_turn_helix isocitrate lyase regulation
C2U31_04280	SM00662	RNA polymerases D
C2U31_04285	SM00363	S4 RNA-binding domain
C2U31_04285	SM01390	C2U31_04285
C2U31_04360	SM01374	C2U31_04360
C2U31_04380	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
C2U31_04380	SM00450	Rhodanese Homology Domain
C2U31_04385	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_04400	SM00382	ATPases associated with a variety of cellular activities
C2U31_04405	SM00382	ATPases associated with a variety of cellular activities
C2U31_04445	SM00322	K homology RNA-binding domain
C2U31_04460	SM01382	C2U31_04460
C2U31_04460	SM01383	C2U31_04460
C2U31_04480	SM01403	C2U31_04480
C2U31_04490	SM00838	Elongation factor G C-terminus
C2U31_04490	SM00889	Elongation factor G, domain IV
C2U31_04505	SM00862	Transcriptional regulatory protein, C terminal
C2U31_04510	SM00448	cheY-homologous receiver domain
C2U31_04510	SM00862	Transcriptional regulatory protein, C terminal
C2U31_04520	SM00387	Histidine kinase-like ATPases
C2U31_04520	SM01080	C2U31_04520
C2U31_04535	SM00663	RNA polymerase I subunit A N-terminus
C2U31_04560	SM00649	Ribosomal protein L11/L12
C2U31_04565	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
C2U31_04565	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
C2U31_04605	SM00420	helix_turn_helix, Deoxyribose operon repressor
C2U31_04605	SM01134	C2U31_04605
C2U31_04610	SM00870	C2U31_04610
C2U31_04615	SM00470	ParB-like nuclease domain
C2U31_04635	SM01228	C2U31_04635
C2U31_04640	SM00357	Cold shock protein domain
C2U31_04670	SM00387	Histidine kinase-like ATPases
C2U31_04670	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_04675	SM00448	cheY-homologous receiver domain
C2U31_04675	SM00862	Transcriptional regulatory protein, C terminal
C2U31_04705	SM00878	Biotin carboxylase C-terminal domain
C2U31_04710	SM00796	Allophanate hydrolase subunit 1
C2U31_04715	SM00797	Allophanate hydrolase subunit 2
C2U31_04725	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_04790	SM00903	Flavin reductase like domain
C2U31_04795	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_04795	SM00895	C2U31_04795
C2U31_04805	SM00530	Helix-turn-helix XRE-family like proteins 
C2U31_04840	SM00382	ATPases associated with a variety of cellular activities
C2U31_04845	SM00382	ATPases associated with a variety of cellular activities
C2U31_04865	SM00382	ATPases associated with a variety of cellular activities
C2U31_04880	SM00387	Histidine kinase-like ATPases
C2U31_04880	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_04880	SM00448	cheY-homologous receiver domain
C2U31_04895	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
C2U31_04910	SM01234	C2U31_04910
C2U31_04925	SM00382	ATPases associated with a variety of cellular activities
C2U31_04925	SM00760	Bacterial dnaA protein helix-turn-helix domain
C2U31_04930	SM00480	DNA polymerase III beta subunit
C2U31_04935	SM00387	Histidine kinase-like ATPases
C2U31_04935	SM00433	TopoisomeraseII
C2U31_04995	SM00382	ATPases associated with a variety of cellular activities
C2U31_05015	SM00346	helix_turn_helix isocitrate lyase regulation
C2U31_05030	SM00382	ATPases associated with a variety of cellular activities
C2U31_05045	SM00062	Bacterial periplasmic substrate-binding proteins
C2U31_05050	SM00382	ATPases associated with a variety of cellular activities
C2U31_05065	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_05065	SM00895	C2U31_05065
C2U31_05085	SM00903	Flavin reductase like domain
C2U31_05095	SM00062	Bacterial periplasmic substrate-binding proteins
C2U31_05110	SM00382	ATPases associated with a variety of cellular activities
C2U31_05145	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_05145	SM00871	Bacterial transcription activator, effector binding domain
C2U31_05165	SM00382	ATPases associated with a variety of cellular activities
C2U31_05175	SM00450	Rhodanese Homology Domain
C2U31_05195	SM00903	Flavin reductase like domain
C2U31_05210	SM00382	ATPases associated with a variety of cellular activities
C2U31_05220	SM00062	Bacterial periplasmic substrate-binding proteins
C2U31_05220	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
C2U31_05225	SM00421	helix_turn_helix, Lux Regulon
C2U31_05270	SM00344	helix_turn_helix ASNC type
C2U31_05280	SM00822	C2U31_05280
C2U31_05290	SM00382	ATPases associated with a variety of cellular activities
C2U31_05300	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
C2U31_05300	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
C2U31_05300	SM00493	C2U31_05300
C2U31_05340	SM01119	C2U31_05340
C2U31_05345	SM00869	Autotransporter beta-domain
C2U31_05365	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
C2U31_05365	SM00091	PAS domain
C2U31_05365	SM00421	helix_turn_helix, Lux Regulon
C2U31_05425	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_05460	SM00382	ATPases associated with a variety of cellular activities
C2U31_05505	SM00878	Biotin carboxylase C-terminal domain
C2U31_05505	SM01209	C2U31_05505
C2U31_05545	SM00422	helix_turn_helix, mercury resistance
C2U31_05550	SM00849	Metallo-beta-lactamase superfamily
C2U31_05585	SM00836	DALR anticodon binding domain
C2U31_05585	SM01016	Arginyl tRNA synthetase N terminal dom
C2U31_05600	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_05600	SM00895	C2U31_05600
C2U31_05635	SM00382	ATPases associated with a variety of cellular activities
C2U31_05645	SM00354	helix_turn _helix lactose operon repressor
C2U31_05655	SM00917	LeuA allosteric (dimerisation) domain
C2U31_05710	SM00487	DEAD-like helicases superfamily
C2U31_05710	SM00490	helicase superfamily c-terminal domain
C2U31_05725	SM00382	ATPases associated with a variety of cellular activities
C2U31_05755	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_05820	SM01007	Class II Aldolase and Adducin N-terminal domain
C2U31_05825	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_05845	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
C2U31_05850	SM00530	Helix-turn-helix XRE-family like proteins 
C2U31_05935	SM00382	ATPases associated with a variety of cellular activities
C2U31_05960	SM00382	ATPases associated with a variety of cellular activities
C2U31_06110	SM00984	UDP binding domain
C2U31_06125	SM00344	helix_turn_helix ASNC type
C2U31_06150	SM00903	Flavin reductase like domain
C2U31_06190	SM00382	ATPases associated with a variety of cellular activities
C2U31_06210	SM00530	Helix-turn-helix XRE-family like proteins 
C2U31_06220	SM00382	ATPases associated with a variety of cellular activities
C2U31_06225	SM00382	ATPases associated with a variety of cellular activities
C2U31_06285	SM00530	Helix-turn-helix XRE-family like proteins 
C2U31_06310	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U31_06310	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U31_06315	SM00052	Putative diguanylate phosphodiesterase
C2U31_06315	SM00091	PAS domain
C2U31_06315	SM00267	diguanylate cyclase
C2U31_06385	SM00448	cheY-homologous receiver domain
C2U31_06385	SM00862	Transcriptional regulatory protein, C terminal
C2U31_06390	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U31_06390	SM00387	Histidine kinase-like ATPases
C2U31_06390	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_06405	SM00829	Enoylreductase
C2U31_06415	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_06415	SM00866	C2U31_06415
C2U31_06450	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U31_06450	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U31_06455	SM00972	Spore Coat Protein U domain
C2U31_06470	SM00972	Spore Coat Protein U domain
C2U31_06475	SM00972	Spore Coat Protein U domain
C2U31_06490	SM00972	Spore Coat Protein U domain
C2U31_06540	SM00062	Bacterial periplasmic substrate-binding proteins
C2U31_06560	SM00382	ATPases associated with a variety of cellular activities
C2U31_06575	SM00382	ATPases associated with a variety of cellular activities
C2U31_06640	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
C2U31_06685	SM00460	Transglutaminase/protease-like homologues
C2U31_06725	SM00382	ATPases associated with a variety of cellular activities
C2U31_06765	SM00925	MltA specific insert domain
C2U31_06790	SM00905	Dihydroneopterin aldolase
C2U31_06860	SM00382	ATPases associated with a variety of cellular activities
C2U31_06880	SM00487	DEAD-like helicases superfamily
C2U31_06880	SM00490	helicase superfamily c-terminal domain
C2U31_06890	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_06915	SM00966	SpoVT / AbrB like domain 
C2U31_06930	SM00382	ATPases associated with a variety of cellular activities
C2U31_06935	SM00382	ATPases associated with a variety of cellular activities
C2U31_07030	SM00869	Autotransporter beta-domain
C2U31_07035	SM00052	Putative diguanylate phosphodiesterase
C2U31_07035	SM00267	diguanylate cyclase
C2U31_07075	SM00382	ATPases associated with a variety of cellular activities
C2U31_07080	SM00382	ATPases associated with a variety of cellular activities
C2U31_07090	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_07090	SM00895	C2U31_07090
C2U31_07125	SM00421	helix_turn_helix, Lux Regulon
C2U31_07155	SM00858	C2U31_07155
C2U31_07160	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_07160	SM00866	C2U31_07160
C2U31_07190	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_07190	SM00895	C2U31_07190
C2U31_07200	SM00797	Allophanate hydrolase subunit 2
C2U31_07205	SM00796	Allophanate hydrolase subunit 1
C2U31_07245	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U31_07245	SM00387	Histidine kinase-like ATPases
C2U31_07245	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_07250	SM00448	cheY-homologous receiver domain
C2U31_07250	SM00862	Transcriptional regulatory protein, C terminal
C2U31_07255	SM00387	Histidine kinase-like ATPases
C2U31_07255	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_07260	SM00448	cheY-homologous receiver domain
C2U31_07260	SM00862	Transcriptional regulatory protein, C terminal
C2U31_07270	SM00978	C2U31_07270
C2U31_07295	SM00869	Autotransporter beta-domain
C2U31_07330	SM01018	B12 binding domain
C2U31_07340	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_07340	SM00895	C2U31_07340
C2U31_07355	SM00382	ATPases associated with a variety of cellular activities
C2U31_07360	SM00062	Bacterial periplasmic substrate-binding proteins
C2U31_07375	SM00382	ATPases associated with a variety of cellular activities
C2U31_07425	SM00830	Chorismate mutase type II
C2U31_07480	SM00421	helix_turn_helix, Lux Regulon
C2U31_07565	SM00382	ATPases associated with a variety of cellular activities
C2U31_07570	SM00382	ATPases associated with a variety of cellular activities
C2U31_07575	SM00530	Helix-turn-helix XRE-family like proteins 
C2U31_07610	SM00347	helix_turn_helix multiple antibiotic resistance protein
C2U31_07630	SM00382	ATPases associated with a variety of cellular activities
C2U31_07635	SM00382	ATPases associated with a variety of cellular activities
C2U31_07640	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U31_07640	SM00331	Sigma factor PP2C-like phosphatases
C2U31_07655	SM00267	diguanylate cyclase
C2U31_07660	SM00052	Putative diguanylate phosphodiesterase
C2U31_07660	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
C2U31_07660	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
C2U31_07660	SM00091	PAS domain
C2U31_07660	SM00267	diguanylate cyclase
C2U31_07670	SM00822	C2U31_07670
C2U31_07700	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_07730	SM00822	C2U31_07730
C2U31_07770	SM00732	Likely ribonuclease with RNase H fold.
C2U31_07785	SM00563	Phosphate acyltransferases
C2U31_07805	SM00062	Bacterial periplasmic substrate-binding proteins
C2U31_07820	SM00382	ATPases associated with a variety of cellular activities
C2U31_07850	SM00382	ATPases associated with a variety of cellular activities
C2U31_07875	SM00387	Histidine kinase-like ATPases
C2U31_07875	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_07880	SM00448	cheY-homologous receiver domain
C2U31_07880	SM00862	Transcriptional regulatory protein, C terminal
C2U31_07885	SM00955	C2U31_07885
C2U31_07915	SM00878	Biotin carboxylase C-terminal domain
C2U31_07990	SM00344	helix_turn_helix ASNC type
C2U31_08055	SM00382	ATPases associated with a variety of cellular activities
C2U31_08060	SM00382	ATPases associated with a variety of cellular activities
C2U31_08075	SM00859	Semialdehyde dehydrogenase, NAD binding domain
C2U31_08100	SM00363	S4 RNA-binding domain
C2U31_08125	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_08150	SM00763	PrkA AAA domain
C2U31_08210	SM00346	helix_turn_helix isocitrate lyase regulation
C2U31_08225	SM00822	C2U31_08225
C2U31_08280	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U31_08305	SM00257	Lysin motif
C2U31_08310	SM00849	Metallo-beta-lactamase superfamily
C2U31_08335	SM00479	C2U31_08335
C2U31_08430	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_08445	SM00838	Elongation factor G C-terminus
C2U31_08445	SM00889	Elongation factor G, domain IV
C2U31_08455	SM00344	helix_turn_helix ASNC type
C2U31_08470	SM00382	ATPases associated with a variety of cellular activities
C2U31_08525	SM00448	cheY-homologous receiver domain
C2U31_08525	SM00862	Transcriptional regulatory protein, C terminal
C2U31_08535	SM00382	ATPases associated with a variety of cellular activities
C2U31_08570	SM00387	Histidine kinase-like ATPases
C2U31_08570	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_08665	SM00344	helix_turn_helix ASNC type
C2U31_08700	SM00151	SWI complex, BAF60b domains
C2U31_08715	SM00382	ATPases associated with a variety of cellular activities
C2U31_08775	SM01209	C2U31_08775
C2U31_08785	SM00842	Cell division protein FtsA
C2U31_08790	SM00864	Tubulin/FtsZ family, GTPase domain
C2U31_08790	SM00865	Tubulin/FtsZ family, C-terminal domain
C2U31_08810	SM00957	SecA DEAD-like domain
C2U31_08810	SM00958	SecA preprotein cross-linking domain
C2U31_08820	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_08820	SM00895	C2U31_08820
C2U31_08850	SM00344	helix_turn_helix ASNC type
C2U31_08865	SM00116	Domain in cystathionine beta-synthase and other proteins.
C2U31_08865	SM00924	MgtE intracellular N domain
C2U31_08910	SM00382	ATPases associated with a variety of cellular activities
C2U31_08910	SM00930	C2U31_08910
C2U31_08945	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_08975	SM00267	diguanylate cyclase
C2U31_08985	SM00822	C2U31_08985
C2U31_09005	SM01329	C2U31_09005
C2U31_09050	SM00650	Ribosomal RNA adenine dimethylases
C2U31_09095	SM00563	Phosphate acyltransferases
C2U31_09135	SM00822	C2U31_09135
C2U31_09250	SM00853	MutL C terminal dimerisation domain
C2U31_09250	SM01340	C2U31_09250
C2U31_09260	SM00646	C2U31_09260
C2U31_09325	SM00903	Flavin reductase like domain
C2U31_09350	SM00382	ATPases associated with a variety of cellular activities
C2U31_09405	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
C2U31_09425	SM00859	Semialdehyde dehydrogenase, NAD binding domain
C2U31_09450	SM00421	helix_turn_helix, Lux Regulon
C2U31_09450	SM00448	cheY-homologous receiver domain
C2U31_09485	SM00490	helicase superfamily c-terminal domain
C2U31_09485	SM00957	SecA DEAD-like domain
C2U31_09485	SM00958	SecA preprotein cross-linking domain
C2U31_09535	SM00382	ATPases associated with a variety of cellular activities
C2U31_09540	SM00346	helix_turn_helix isocitrate lyase regulation
C2U31_09565	SM00382	ATPases associated with a variety of cellular activities
C2U31_09570	SM00382	ATPases associated with a variety of cellular activities
C2U31_09635	SM00347	helix_turn_helix multiple antibiotic resistance protein
C2U31_09655	SM00382	ATPases associated with a variety of cellular activities
C2U31_09660	SM00382	ATPases associated with a variety of cellular activities
C2U31_09670	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_09680	SM00382	ATPases associated with a variety of cellular activities
C2U31_09730	SM00341	Helicase and RNase D C-terminal
C2U31_09730	SM00487	DEAD-like helicases superfamily
C2U31_09730	SM00490	helicase superfamily c-terminal domain
C2U31_09730	SM00956	C2U31_09730
C2U31_09740	SM00448	cheY-homologous receiver domain
C2U31_09740	SM00862	Transcriptional regulatory protein, C terminal
C2U31_09745	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U31_09745	SM00387	Histidine kinase-like ATPases
C2U31_09750	SM00382	ATPases associated with a variety of cellular activities
C2U31_09765	SM00278	Helix-hairpin-helix DNA-binding motif class 1
C2U31_09775	SM00798	AICARFT/IMPCHase bienzyme
C2U31_09775	SM00851	MGS-like domain
C2U31_09800	SM01011	Aminopeptidase P, N-terminal domain
C2U31_09815	SM00831	Cation transporter/ATPase, N-terminus
C2U31_09870	SM00487	DEAD-like helicases superfamily
C2U31_09870	SM00490	helicase superfamily c-terminal domain
C2U31_09885	SM00852	Probable molybdopterin binding domain
C2U31_09890	SM00346	helix_turn_helix isocitrate lyase regulation
C2U31_09960	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
C2U31_09970	SM01130	C2U31_09970
C2U31_09975	SM00858	C2U31_09975
C2U31_09980	SM00062	Bacterial periplasmic substrate-binding proteins
C2U31_09985	SM00382	ATPases associated with a variety of cellular activities
C2U31_10000	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_10000	SM00895	C2U31_10000
C2U31_10055	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
C2U31_10055	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
C2U31_10055	SM00493	C2U31_10055
C2U31_10100	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_10190	SM00487	DEAD-like helicases superfamily
C2U31_10305	SM00530	Helix-turn-helix XRE-family like proteins 
C2U31_10340	SM00953	C2U31_10340
C2U31_10400	SM00829	Enoylreductase
C2U31_10430	SM00882	Coenzyme A transferase
C2U31_10435	SM00882	Coenzyme A transferase
C2U31_10475	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
C2U31_10540	SM00829	Enoylreductase
C2U31_10550	SM00849	Metallo-beta-lactamase superfamily
C2U31_10570	SM00829	Enoylreductase
C2U31_10585	SM00822	C2U31_10585
C2U31_10610	SM00530	Helix-turn-helix XRE-family like proteins 
C2U31_10675	SM00965	Secretin and TonB N terminus short domain
C2U31_10695	SM00448	cheY-homologous receiver domain
C2U31_10695	SM00862	Transcriptional regulatory protein, C terminal
C2U31_10700	SM00387	Histidine kinase-like ATPases
C2U31_10705	SM00495	Chitin-binding domain type 3
C2U31_10715	SM00870	C2U31_10715
C2U31_10725	SM00346	helix_turn_helix isocitrate lyase regulation
C2U31_10760	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_10840	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
C2U31_10840	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
C2U31_10840	SM00493	C2U31_10840
C2U31_10880	SM00267	diguanylate cyclase
C2U31_10940	SM00487	DEAD-like helicases superfamily
C2U31_11125	SM00822	C2U31_11125
C2U31_11140	SM00382	ATPases associated with a variety of cellular activities
C2U31_11170	SM00953	C2U31_11170
C2U31_11250	SM00271	DnaJ molecular chaperone homology domain
C2U31_11285	SM00382	ATPases associated with a variety of cellular activities
C2U31_11305	SM01329	C2U31_11305
C2U31_11320	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U31_11320	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U31_11320	SM01049	C2U31_11320
C2U31_11325	SM01130	C2U31_11325
C2U31_11340	SM00448	cheY-homologous receiver domain
C2U31_11340	SM00862	Transcriptional regulatory protein, C terminal
C2U31_11345	SM00387	Histidine kinase-like ATPases
C2U31_11345	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_11385	SM00463	Small MutS-related domain
C2U31_11395	SM00382	ATPases associated with a variety of cellular activities
C2U31_11395	SM00843	C2U31_11395
C2U31_11420	SM00382	ATPases associated with a variety of cellular activities
C2U31_11425	SM00382	ATPases associated with a variety of cellular activities
C2U31_11445	SM01119	C2U31_11445
C2U31_11470	SM00382	ATPases associated with a variety of cellular activities
C2U31_11525	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_11530	SM00052	Putative diguanylate phosphodiesterase
C2U31_11535	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U31_11535	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U31_11540	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U31_11540	SM00387	Histidine kinase-like ATPases
C2U31_11540	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_11570	SM00382	ATPases associated with a variety of cellular activities
C2U31_11625	SM01387	C2U31_11625
C2U31_11630	SM00316	Ribosomal protein S1-like RNA-binding domain
C2U31_11630	SM00322	K homology RNA-binding domain
C2U31_11650	SM01130	C2U31_11650
C2U31_11665	SM00530	Helix-turn-helix XRE-family like proteins 
C2U31_11735	SM00421	helix_turn_helix, Lux Regulon
C2U31_11735	SM00448	cheY-homologous receiver domain
C2U31_11740	SM00052	Putative diguanylate phosphodiesterase
C2U31_11740	SM00448	cheY-homologous receiver domain
C2U31_11745	SM00448	cheY-homologous receiver domain
C2U31_11745	SM00862	Transcriptional regulatory protein, C terminal
C2U31_11750	SM00862	Transcriptional regulatory protein, C terminal
C2U31_11765	SM00448	cheY-homologous receiver domain
C2U31_11765	SM00862	Transcriptional regulatory protein, C terminal
C2U31_11785	SM00829	Enoylreductase
C2U31_11830	SM00382	ATPases associated with a variety of cellular activities
C2U31_11875	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_11905	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
C2U31_11905	SM00267	diguanylate cyclase
C2U31_11920	SM00736	Dystroglycan-type cadherin-like domains.
C2U31_11980	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
C2U31_11985	SM00422	helix_turn_helix, mercury resistance
C2U31_12115	SM00387	Histidine kinase-like ATPases
C2U31_12115	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_12120	SM00448	cheY-homologous receiver domain
C2U31_12120	SM00862	Transcriptional regulatory protein, C terminal
C2U31_12140	SM00822	C2U31_12140
C2U31_12145	SM00912	haemagglutination activity domain
C2U31_12160	SM00965	Secretin and TonB N terminus short domain
C2U31_12170	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
C2U31_12170	SM00382	ATPases associated with a variety of cellular activities
C2U31_12245	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_12325	SM00046	Diacylglycerol kinase catalytic domain (presumed)
C2U31_12335	SM00014	Acid phosphatase homologues
C2U31_12385	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
C2U31_12390	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
C2U31_12445	SM00487	DEAD-like helicases superfamily
C2U31_12445	SM00490	helicase superfamily c-terminal domain
C2U31_12445	SM00982	C2U31_12445
C2U31_12445	SM01058	CarD-like/TRCF domain
C2U31_12475	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U31_12475	SM00387	Histidine kinase-like ATPases
C2U31_12475	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_12480	SM00448	cheY-homologous receiver domain
C2U31_12480	SM00862	Transcriptional regulatory protein, C terminal
C2U31_12490	SM00986	Uracil DNA glycosylase superfamily
C2U31_12490	SM00987	UreE urease accessory protein, C-terminal domain 
C2U31_12500	SM00968	SMC proteins Flexible Hinge Domain
C2U31_12505	SM00771	ZipA, C-terminal domain (FtsZ-binding)
C2U31_12510	SM00278	Helix-hairpin-helix DNA-binding motif class 1
C2U31_12510	SM00292	breast cancer carboxy-terminal domain
C2U31_12510	SM00532	Ligase N family
C2U31_12515	SM00346	helix_turn_helix isocitrate lyase regulation
C2U31_12560	SM00382	ATPases associated with a variety of cellular activities
C2U31_12585	SM00382	ATPases associated with a variety of cellular activities
C2U31_12590	SM00382	ATPases associated with a variety of cellular activities
C2U31_12595	SM01022	C2U31_12595
C2U31_12625	SM00382	ATPases associated with a variety of cellular activities
C2U31_12630	SM00382	ATPases associated with a variety of cellular activities
C2U31_12635	SM00478	endonuclease III
C2U31_12635	SM00525	C2U31_12635
C2U31_12690	SM00954	Region found in RelA / SpoT proteins
C2U31_12760	SM00470	ParB-like nuclease domain
C2U31_12780	SM00530	Helix-turn-helix XRE-family like proteins 
C2U31_12920	SM00382	ATPases associated with a variety of cellular activities
C2U31_12970	SM00316	Ribosomal protein S1-like RNA-binding domain
C2U31_12975	SM00363	S4 RNA-binding domain
C2U31_12995	SM00644	C2U31_12995
C2U31_13030	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
C2U31_13035	SM00822	C2U31_13035
C2U31_13045	SM00825	Beta-ketoacyl synthase
C2U31_13070	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
C2U31_13075	SM00838	Elongation factor G C-terminus
C2U31_13085	SM00358	Double-stranded RNA binding motif
C2U31_13085	SM00535	Ribonuclease III family
C2U31_13230	SM00882	Coenzyme A transferase
C2U31_13235	SM00882	Coenzyme A transferase
C2U31_13245	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_13265	SM00382	ATPases associated with a variety of cellular activities
C2U31_13305	SM01130	C2U31_13305
C2U31_13325	SM01192	C2U31_13325
C2U31_13325	SM01193	C2U31_13325
C2U31_13380	SM00981	C2U31_13380
C2U31_13410	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_13410	SM00866	C2U31_13410
C2U31_13445	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_13470	SM00382	ATPases associated with a variety of cellular activities
C2U31_13475	SM00382	ATPases associated with a variety of cellular activities
C2U31_13485	SM00387	Histidine kinase-like ATPases
C2U31_13485	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_13490	SM00448	cheY-homologous receiver domain
C2U31_13490	SM00862	Transcriptional regulatory protein, C terminal
C2U31_13510	SM00919	Malic enzyme, NAD binding domain
C2U31_13510	SM01274	C2U31_13510
C2U31_13535	SM00344	helix_turn_helix ASNC type
C2U31_13540	SM00861	Transketolase, pyrimidine binding domain
C2U31_13595	SM00912	haemagglutination activity domain
C2U31_13605	SM00316	Ribosomal protein S1-like RNA-binding domain
C2U31_13605	SM00732	Likely ribonuclease with RNase H fold.
C2U31_13610	SM00491	C2U31_13610
C2U31_13620	SM00363	S4 RNA-binding domain
C2U31_13635	SM00822	C2U31_13635
C2U31_13670	SM00749	bacterial OsmY and nodulation domain
C2U31_13685	SM01209	C2U31_13685
C2U31_13695	SM00382	ATPases associated with a variety of cellular activities
C2U31_13765	SM00028	Tetratricopeptide repeats
C2U31_13875	SM00530	Helix-turn-helix XRE-family like proteins 
C2U31_13880	SM00530	Helix-turn-helix XRE-family like proteins 
C2U31_13915	SM00382	ATPases associated with a variety of cellular activities
C2U31_14160	SM00434	DNA Topoisomerase IV
C2U31_14170	SM00830	Chorismate mutase type II
C2U31_14195	SM00316	Ribosomal protein S1-like RNA-binding domain
C2U31_14200	SM00411	bacterial (prokaryotic) histone like domain
C2U31_14225	SM00278	Helix-hairpin-helix DNA-binding motif class 1
C2U31_14245	SM00893	Electron transfer flavoprotein domain
C2U31_14250	SM00893	Electron transfer flavoprotein domain
C2U31_14275	SM00382	ATPases associated with a variety of cellular activities
C2U31_14295	SM00729	Elongator protein 3, MiaB family, Radical SAM
C2U31_14330	SM00479	C2U31_14330
C2U31_14435	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
C2U31_14440	SM00387	Histidine kinase-like ATPases
C2U31_14440	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_14445	SM00448	cheY-homologous receiver domain
C2U31_14445	SM00862	Transcriptional regulatory protein, C terminal
C2U31_14460	SM00833	Cobalamin synthesis protein cobW C-terminal domain
C2U31_14480	SM00363	S4 RNA-binding domain
C2U31_14490	SM00316	Ribosomal protein S1-like RNA-binding domain
C2U31_14530	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
C2U31_14530	SM00474	3'-5' exonuclease
C2U31_14530	SM00475	5'-3' exonuclease
C2U31_14530	SM00479	C2U31_14530
C2U31_14530	SM00482	DNA polymerase A domain
C2U31_14555	SM00354	helix_turn _helix lactose operon repressor
C2U31_14575	SM00382	ATPases associated with a variety of cellular activities
C2U31_14600	SM00450	Rhodanese Homology Domain
C2U31_14615	SM00382	ATPases associated with a variety of cellular activities
C2U31_14655	SM00346	helix_turn_helix isocitrate lyase regulation
C2U31_14670	SM00861	Transketolase, pyrimidine binding domain
C2U31_14710	SM00382	ATPases associated with a variety of cellular activities
C2U31_14730	SM00344	helix_turn_helix ASNC type
C2U31_14755	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_14770	SM00248	ankyrin repeats
C2U31_14815	SM00267	diguanylate cyclase
C2U31_14835	SM00387	Histidine kinase-like ATPases
C2U31_14835	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_14840	SM00448	cheY-homologous receiver domain
C2U31_14840	SM00862	Transcriptional regulatory protein, C terminal
C2U31_14845	SM00382	ATPases associated with a variety of cellular activities
C2U31_14880	SM00881	CoA binding domain
C2U31_14920	SM00346	helix_turn_helix isocitrate lyase regulation
C2U31_14940	SM00822	C2U31_14940
C2U31_14945	SM00382	ATPases associated with a variety of cellular activities
C2U31_14950	SM00382	ATPases associated with a variety of cellular activities
C2U31_14960	SM00886	Stress responsive A/B Barrel Domain
C2U31_14975	SM00670	Large family of predicted nucleotide-binding domains
C2U31_15025	SM00528	Domain in histone-like proteins of HNS family
C2U31_15070	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
C2U31_15070	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
C2U31_15165	SM00382	ATPases associated with a variety of cellular activities
C2U31_15280	SM00267	diguanylate cyclase
C2U31_15375	SM00989	C2U31_15375
C2U31_15390	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_15420	SM00905	Dihydroneopterin aldolase
C2U31_15435	SM01144	C2U31_15435
C2U31_15445	SM00316	Ribosomal protein S1-like RNA-binding domain
C2U31_15445	SM00357	Cold shock protein domain
C2U31_15445	SM00955	C2U31_15445
C2U31_15450	SM00967	RNA 2'-O ribose methyltransferase substrate binding
C2U31_15460	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
C2U31_15465	SM00411	bacterial (prokaryotic) histone like domain
C2U31_15490	SM00448	cheY-homologous receiver domain
C2U31_15490	SM00862	Transcriptional regulatory protein, C terminal
C2U31_15495	SM00387	Histidine kinase-like ATPases
C2U31_15495	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_15580	SM01120	C2U31_15580
C2U31_15595	SM00382	ATPases associated with a variety of cellular activities
C2U31_15730	SM00382	ATPases associated with a variety of cellular activities
C2U31_15730	SM00487	DEAD-like helicases superfamily
C2U31_15730	SM00490	helicase superfamily c-terminal domain
C2U31_15730	SM00847	Helicase associated domain (HA2)  Add an annotation
C2U31_15740	SM00382	ATPases associated with a variety of cellular activities
C2U31_15750	SM00481	DNA polymerase alpha chain like domain
C2U31_15805	SM00382	ATPases associated with a variety of cellular activities
C2U31_15820	SM00267	diguanylate cyclase
C2U31_15825	SM00267	diguanylate cyclase
C2U31_15845	SM00316	Ribosomal protein S1-like RNA-binding domain
C2U31_15880	SM01007	Class II Aldolase and Adducin N-terminal domain
C2U31_15970	SM00347	helix_turn_helix multiple antibiotic resistance protein
C2U31_15975	SM00411	bacterial (prokaryotic) histone like domain
C2U31_15980	SM00936	Penicillin-binding protein 5, C-terminal domain 
C2U31_16000	SM00382	ATPases associated with a variety of cellular activities
C2U31_16050	SM00382	ATPases associated with a variety of cellular activities
C2U31_16070	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_16070	SM00895	C2U31_16070
C2U31_16105	SM00965	Secretin and TonB N terminus short domain
C2U31_16125	SM00382	ATPases associated with a variety of cellular activities
C2U31_16170	SM00382	ATPases associated with a variety of cellular activities
C2U31_16190	SM00862	Transcriptional regulatory protein, C terminal
C2U31_16225	SM00278	Helix-hairpin-helix DNA-binding motif class 1
C2U31_16225	SM00465	GIY-YIG type nucleases (URI domain)
C2U31_16255	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_16255	SM00895	C2U31_16255
C2U31_16265	SM00382	ATPases associated with a variety of cellular activities
C2U31_16370	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
C2U31_16375	SM01130	C2U31_16375
C2U31_16380	SM00382	ATPases associated with a variety of cellular activities
C2U31_16410	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_16445	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_16490	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_16490	SM00895	C2U31_16490
C2U31_16525	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_16545	SM00382	ATPases associated with a variety of cellular activities
C2U31_16575	SM00363	S4 RNA-binding domain
C2U31_16585	SM00052	Putative diguanylate phosphodiesterase
C2U31_16585	SM00267	diguanylate cyclase
C2U31_16610	SM00382	ATPases associated with a variety of cellular activities
C2U31_16745	SM00382	ATPases associated with a variety of cellular activities
C2U31_16755	SM00382	ATPases associated with a variety of cellular activities
C2U31_16765	SM00530	Helix-turn-helix XRE-family like proteins 
C2U31_16780	SM00834	Putative regulatory protein
C2U31_16820	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
C2U31_16855	SM00938	Nitrogen regulatory protein P-II
C2U31_16870	SM00382	ATPases associated with a variety of cellular activities
C2U31_16890	SM00873	B3/4 domain
C2U31_16890	SM00874	tRNA synthetase B5 domain
C2U31_16890	SM00896	Ferredoxin-fold anticodon binding domain
C2U31_16895	SM00411	bacterial (prokaryotic) histone like domain
C2U31_16900	SM00422	helix_turn_helix, mercury resistance
C2U31_16915	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
C2U31_16970	SM00344	helix_turn_helix ASNC type
C2U31_17020	SM00062	Bacterial periplasmic substrate-binding proteins
C2U31_17030	SM00382	ATPases associated with a variety of cellular activities
C2U31_17060	SM00382	ATPases associated with a variety of cellular activities
C2U31_17090	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_17120	SM00267	diguanylate cyclase
C2U31_17185	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_17245	SM00347	helix_turn_helix multiple antibiotic resistance protein
C2U31_17270	SM00100	Cyclic nucleotide-monophosphate binding domain
C2U31_17270	SM00419	helix_turn_helix, cAMP Regulatory protein
C2U31_17275	SM00506	Appr-1"-p processing enzyme
C2U31_17300	SM00855	Phosphoglycerate mutase family
C2U31_17310	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_17360	SM00354	helix_turn _helix lactose operon repressor
C2U31_17395	SM00530	Helix-turn-helix XRE-family like proteins 
C2U31_17415	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_17415	SM00895	C2U31_17415
C2U31_17450	SM00382	ATPases associated with a variety of cellular activities
C2U31_17480	SM00422	helix_turn_helix, mercury resistance
C2U31_17490	SM00347	helix_turn_helix multiple antibiotic resistance protein
C2U31_17500	SM00382	ATPases associated with a variety of cellular activities
C2U31_17520	SM00822	C2U31_17520
C2U31_17525	SM00822	C2U31_17525
C2U31_17540	SM00861	Transketolase, pyrimidine binding domain
C2U31_17590	SM00938	Nitrogen regulatory protein P-II
C2U31_17605	SM00382	ATPases associated with a variety of cellular activities
C2U31_17775	SM00382	ATPases associated with a variety of cellular activities
C2U31_17780	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_17795	SM01322	C2U31_17795
C2U31_17875	SM00421	helix_turn_helix, Lux Regulon
C2U31_17875	SM00448	cheY-homologous receiver domain
C2U31_17880	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
C2U31_17880	SM00091	PAS domain
C2U31_17880	SM00387	Histidine kinase-like ATPases
C2U31_17880	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_17960	SM00448	cheY-homologous receiver domain
C2U31_17965	SM00073	Histidine Phosphotransfer domain
C2U31_17965	SM00260	Two component signalling adaptor domain
C2U31_17965	SM00387	Histidine kinase-like ATPases
C2U31_17965	SM01231	C2U31_17965
C2U31_17970	SM00260	Two component signalling adaptor domain
C2U31_17975	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U31_17975	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U31_17980	SM00138	Methyltransferase, chemotaxis proteins 
C2U31_17985	SM00448	cheY-homologous receiver domain
C2U31_17990	SM00448	cheY-homologous receiver domain
C2U31_18000	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U31_18015	SM00382	ATPases associated with a variety of cellular activities
C2U31_18015	SM00962	SRP54-type protein, GTPase domain
C2U31_18030	SM00858	C2U31_18030
C2U31_18075	SM00047	Lysozyme subfamily 2
C2U31_18090	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U31_18090	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U31_18095	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U31_18095	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U31_18105	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U31_18105	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U31_18155	SM00382	ATPases associated with a variety of cellular activities
C2U31_18280	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C2U31_18325	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
C2U31_18335	SM00935	Outer membrane protein (OmpH-like)
C2U31_18420	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_18435	SM00244	prohibitin homologues
C2U31_18440	SM00267	diguanylate cyclase
C2U31_18510	SM00248	ankyrin repeats
C2U31_18515	SM00346	helix_turn_helix isocitrate lyase regulation
C2U31_18520	SM00062	Bacterial periplasmic substrate-binding proteins
C2U31_18520	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
C2U31_18530	SM00382	ATPases associated with a variety of cellular activities
C2U31_18545	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
C2U31_18585	SM00344	helix_turn_helix ASNC type
C2U31_18635	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
C2U31_18635	SM00091	PAS domain
C2U31_18635	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U31_18635	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U31_18700	SM00382	ATPases associated with a variety of cellular activities
C2U31_18740	SM00344	helix_turn_helix ASNC type
C2U31_18745	SM00506	Appr-1"-p processing enzyme
C2U31_18775	SM00869	Autotransporter beta-domain
C2U31_18805	SM00487	DEAD-like helicases superfamily
C2U31_18805	SM00490	helicase superfamily c-terminal domain
C2U31_18820	SM00346	helix_turn_helix isocitrate lyase regulation
C2U31_18840	SM00344	helix_turn_helix ASNC type
C2U31_18865	SM00382	ATPases associated with a variety of cellular activities
C2U31_18870	SM00382	ATPases associated with a variety of cellular activities
C2U31_18880	SM00833	Cobalamin synthesis protein cobW C-terminal domain
C2U31_18895	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_18905	SM00382	ATPases associated with a variety of cellular activities
C2U31_18910	SM00062	Bacterial periplasmic substrate-binding proteins
C2U31_18930	SM00346	helix_turn_helix isocitrate lyase regulation
C2U31_18945	SM00858	C2U31_18945
C2U31_18965	SM00382	ATPases associated with a variety of cellular activities
C2U31_18970	SM00062	Bacterial periplasmic substrate-binding proteins
C2U31_18975	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
C2U31_18985	SM00421	helix_turn_helix, Lux Regulon
C2U31_18985	SM00448	cheY-homologous receiver domain
C2U31_18990	SM00387	Histidine kinase-like ATPases
C2U31_18990	SM01049	C2U31_18990
C2U31_19020	SM00344	helix_turn_helix ASNC type
C2U31_19040	SM00382	ATPases associated with a variety of cellular activities
C2U31_19050	SM00448	cheY-homologous receiver domain
C2U31_19050	SM00862	Transcriptional regulatory protein, C terminal
C2U31_19070	SM00052	Putative diguanylate phosphodiesterase
C2U31_19070	SM00448	cheY-homologous receiver domain
C2U31_19135	SM00448	cheY-homologous receiver domain
C2U31_19135	SM00862	Transcriptional regulatory protein, C terminal
C2U31_19140	SM00387	Histidine kinase-like ATPases
C2U31_19140	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_19215	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_19225	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_19225	SM00866	C2U31_19225
C2U31_19245	SM00382	ATPases associated with a variety of cellular activities
C2U31_19250	SM00382	ATPases associated with a variety of cellular activities
C2U31_19290	SM00450	Rhodanese Homology Domain
C2U31_19310	SM00100	Cyclic nucleotide-monophosphate binding domain
C2U31_19310	SM00419	helix_turn_helix, cAMP Regulatory protein
C2U31_19315	SM00421	helix_turn_helix, Lux Regulon
C2U31_19315	SM00448	cheY-homologous receiver domain
C2U31_19320	SM00091	PAS domain
C2U31_19320	SM00387	Histidine kinase-like ATPases
C2U31_19330	SM00116	Domain in cystathionine beta-synthase and other proteins.
C2U31_19335	SM00849	Metallo-beta-lactamase superfamily
C2U31_19335	SM01027	Beta-Casp domain
C2U31_19380	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
C2U31_19405	SM00729	Elongator protein 3, MiaB family, Radical SAM
C2U31_19410	SM00947	Carbonic anhydrase
C2U31_19420	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
C2U31_19420	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U31_19420	SM00387	Histidine kinase-like ATPases
C2U31_19425	SM00421	helix_turn_helix, Lux Regulon
C2U31_19425	SM00448	cheY-homologous receiver domain
C2U31_19455	SM00062	Bacterial periplasmic substrate-binding proteins
C2U31_19475	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_19490	SM00382	ATPases associated with a variety of cellular activities
C2U31_19530	SM00965	Secretin and TonB N terminus short domain
C2U31_19545	SM00912	haemagglutination activity domain
C2U31_19615	SM01092	CO dehydrogenase flavoprotein C-terminal domain
C2U31_19625	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
C2U31_19670	SM00347	helix_turn_helix multiple antibiotic resistance protein
C2U31_19685	SM00450	Rhodanese Homology Domain
C2U31_19710	SM00421	helix_turn_helix, Lux Regulon
C2U31_19710	SM00448	cheY-homologous receiver domain
C2U31_19715	SM00387	Histidine kinase-like ATPases
C2U31_19715	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_19720	SM00116	Domain in cystathionine beta-synthase and other proteins.
C2U31_19730	SM00859	Semialdehyde dehydrogenase, NAD binding domain
C2U31_19740	SM00849	Metallo-beta-lactamase superfamily
C2U31_19800	SM00849	Metallo-beta-lactamase superfamily
C2U31_19835	SM00062	Bacterial periplasmic substrate-binding proteins
C2U31_19835	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
C2U31_19845	SM00382	ATPases associated with a variety of cellular activities
C2U31_19860	SM00346	helix_turn_helix isocitrate lyase regulation
C2U31_19880	SM00382	ATPases associated with a variety of cellular activities
C2U31_19910	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_19935	SM01006	Siderophore biosynthesis protein domain
C2U31_19945	SM00382	ATPases associated with a variety of cellular activities
C2U31_19980	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_19985	SM00822	C2U31_19985
C2U31_19990	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_19990	SM00895	C2U31_19990
C2U31_20095	SM00155	Phospholipase D. Active site motifs.
C2U31_20100	SM00823	Phosphopantetheine attachment site
C2U31_20100	SM01294	C2U31_20100
C2U31_20105	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
C2U31_20140	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_20210	SM00880	C2U31_20210
C2U31_20220	SM00749	bacterial OsmY and nodulation domain
C2U31_20250	SM01192	C2U31_20250
C2U31_20250	SM01193	C2U31_20250
C2U31_20265	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_20275	SM00822	C2U31_20275
C2U31_20360	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_20360	SM00866	C2U31_20360
C2U31_20385	SM00363	S4 RNA-binding domain
C2U31_20390	SM00422	helix_turn_helix, mercury resistance
C2U31_20420	SM00267	diguanylate cyclase
C2U31_20425	SM00267	diguanylate cyclase
C2U31_20475	SM00965	Secretin and TonB N terminus short domain
C2U31_20480	SM00912	haemagglutination activity domain
C2U31_20495	SM00382	ATPases associated with a variety of cellular activities
C2U31_20525	SM00347	helix_turn_helix multiple antibiotic resistance protein
C2U31_20555	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U31_20555	SM00387	Histidine kinase-like ATPases
C2U31_20555	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_20560	SM01091	Transporter associated domain
C2U31_20575	SM00052	Putative diguanylate phosphodiesterase
C2U31_20600	SM00829	Enoylreductase
C2U31_20635	SM00382	ATPases associated with a variety of cellular activities
C2U31_20640	SM00382	ATPases associated with a variety of cellular activities
C2U31_20685	SM00382	ATPases associated with a variety of cellular activities
C2U31_20700	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U31_20700	SM00387	Histidine kinase-like ATPases
C2U31_20700	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_20705	SM00448	cheY-homologous receiver domain
C2U31_20705	SM00862	Transcriptional regulatory protein, C terminal
C2U31_20730	SM00487	DEAD-like helicases superfamily
C2U31_20730	SM00490	helicase superfamily c-terminal domain
C2U31_20775	SM00382	ATPases associated with a variety of cellular activities
C2U31_20810	SM00382	ATPases associated with a variety of cellular activities
C2U31_20810	SM00448	cheY-homologous receiver domain
C2U31_20815	SM00091	PAS domain
C2U31_20815	SM00387	Histidine kinase-like ATPases
C2U31_20815	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_20825	SM01230	C2U31_20825
C2U31_20830	SM00729	Elongator protein 3, MiaB family, Radical SAM
C2U31_20840	SM00052	Putative diguanylate phosphodiesterase
C2U31_20840	SM00267	diguanylate cyclase
C2U31_20845	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U31_20845	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U31_20885	SM00382	ATPases associated with a variety of cellular activities
C2U31_20940	SM00822	C2U31_20940
C2U31_20955	SM00072	Guanylate kinase homologues.
C2U31_20960	SM01409	C2U31_20960
C2U31_20965	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C2U31_20965	SM00954	Region found in RelA / SpoT proteins
C2U31_20995	SM00382	ATPases associated with a variety of cellular activities
C2U31_21005	SM00062	Bacterial periplasmic substrate-binding proteins
C2U31_21005	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
C2U31_21050	SM00382	ATPases associated with a variety of cellular activities
C2U31_21055	SM00382	ATPases associated with a variety of cellular activities
C2U31_21135	SM00382	ATPases associated with a variety of cellular activities
C2U31_21150	SM00382	ATPases associated with a variety of cellular activities
C2U31_21185	SM01150	C2U31_21185
C2U31_21215	SM00422	helix_turn_helix, mercury resistance
C2U31_21240	SM00257	Lysin motif
C2U31_21255	SM01207	C2U31_21255
C2U31_21285	SM00062	Bacterial periplasmic substrate-binding proteins
C2U31_21300	SM00382	ATPases associated with a variety of cellular activities
C2U31_21310	SM00382	ATPases associated with a variety of cellular activities
C2U31_21400	SM00344	helix_turn_helix ASNC type
C2U31_21455	SM00862	Transcriptional regulatory protein, C terminal
C2U31_21485	SM00382	ATPases associated with a variety of cellular activities
C2U31_21490	SM00382	ATPases associated with a variety of cellular activities
C2U31_21495	SM00420	helix_turn_helix, Deoxyribose operon repressor
C2U31_21495	SM01134	C2U31_21495
C2U31_21510	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C2U31_21520	SM00862	Transcriptional regulatory protein, C terminal
C2U31_21555	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
C2U31_21575	SM00347	helix_turn_helix multiple antibiotic resistance protein
C2U31_21615	SM00382	ATPases associated with a variety of cellular activities
C2U31_21620	SM00382	ATPases associated with a variety of cellular activities
C2U31_21655	SM00419	helix_turn_helix, cAMP Regulatory protein
C2U31_21715	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_21720	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_21730	SM00822	C2U31_21730
C2U31_21770	SM00481	DNA polymerase alpha chain like domain
C2U31_21795	SM00464	Found in ATP-dependent protease La (LON)
C2U31_21810	SM01012	C2U31_21810
C2U31_21820	SM00382	ATPases associated with a variety of cellular activities
C2U31_21825	SM00382	ATPases associated with a variety of cellular activities
C2U31_21855	SM00346	helix_turn_helix isocitrate lyase regulation
C2U31_21905	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_21960	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_21970	SM00346	helix_turn_helix isocitrate lyase regulation
C2U31_22010	SM00347	helix_turn_helix multiple antibiotic resistance protein
C2U31_22080	SM00062	Bacterial periplasmic substrate-binding proteins
C2U31_22095	SM00382	ATPases associated with a variety of cellular activities
C2U31_22100	SM00346	helix_turn_helix isocitrate lyase regulation
C2U31_22175	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_22175	SM00895	C2U31_22175
C2U31_22200	SM00347	helix_turn_helix multiple antibiotic resistance protein
C2U31_22225	SM00344	helix_turn_helix ASNC type
C2U31_22235	SM00382	ATPases associated with a variety of cellular activities
C2U31_22250	SM00267	diguanylate cyclase
C2U31_22250	SM00448	cheY-homologous receiver domain
C2U31_22255	SM00448	cheY-homologous receiver domain
C2U31_22260	SM00073	Histidine Phosphotransfer domain
C2U31_22260	SM00260	Two component signalling adaptor domain
C2U31_22260	SM00387	Histidine kinase-like ATPases
C2U31_22260	SM00448	cheY-homologous receiver domain
C2U31_22265	SM00260	Two component signalling adaptor domain
C2U31_22270	SM00138	Methyltransferase, chemotaxis proteins 
C2U31_22275	SM00260	Two component signalling adaptor domain
C2U31_22280	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U31_22280	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U31_22305	SM00491	C2U31_22305
C2U31_22310	SM00990	C2U31_22310
C2U31_22355	SM00822	C2U31_22355
C2U31_22365	SM00881	CoA binding domain
C2U31_22465	SM00382	ATPases associated with a variety of cellular activities
C2U31_22490	SM00895	C2U31_22490
C2U31_22530	SM00530	Helix-turn-helix XRE-family like proteins 
C2U31_22560	SM00478	endonuclease III
C2U31_22645	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_22670	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_22670	SM00895	C2U31_22670
C2U31_22730	SM00829	Enoylreductase
C2U31_22735	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
C2U31_22745	SM00530	Helix-turn-helix XRE-family like proteins 
C2U31_22810	SM00116	Domain in cystathionine beta-synthase and other proteins.
C2U31_22810	SM01240	C2U31_22810
C2U31_22835	SM00052	Putative diguanylate phosphodiesterase
C2U31_22840	SM00267	diguanylate cyclase
C2U31_22870	SM00382	ATPases associated with a variety of cellular activities
C2U31_22875	SM00382	ATPases associated with a variety of cellular activities
C2U31_22940	SM00869	Autotransporter beta-domain
C2U31_22990	SM00267	diguanylate cyclase
C2U31_23000	SM00477	DNA/RNA non-specific endonuclease
C2U31_23000	SM00892	DNA/RNA non-specific endonuclease
C2U31_23020	SM01130	C2U31_23020
C2U31_23025	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_23025	SM00895	C2U31_23025
C2U31_23045	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_23060	SM00507	HNH nucleases
C2U31_23075	SM00869	Autotransporter beta-domain
C2U31_23115	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U31_23115	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U31_23120	SM00346	helix_turn_helix isocitrate lyase regulation
C2U31_23135	SM01211	C2U31_23135
C2U31_23175	SM00382	ATPases associated with a variety of cellular activities
C2U31_23190	SM00382	ATPases associated with a variety of cellular activities
C2U31_23200	SM00344	helix_turn_helix ASNC type
C2U31_23215	SM00822	C2U31_23215
C2U31_23235	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_23235	SM00866	C2U31_23235
C2U31_23260	SM00822	C2U31_23260
C2U31_23280	SM00052	Putative diguanylate phosphodiesterase
C2U31_23280	SM00091	PAS domain
C2U31_23280	SM00267	diguanylate cyclase
C2U31_23295	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_23295	SM00895	C2U31_23295
C2U31_23315	SM00382	ATPases associated with a variety of cellular activities
C2U31_23335	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
C2U31_23395	SM00347	helix_turn_helix multiple antibiotic resistance protein
C2U31_23425	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
C2U31_23440	SM00382	ATPases associated with a variety of cellular activities
C2U31_23480	SM00028	Tetratricopeptide repeats
C2U31_23505	SM00422	helix_turn_helix, mercury resistance
C2U31_23525	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
C2U31_23540	SM00986	Uracil DNA glycosylase superfamily
C2U31_23540	SM00987	UreE urease accessory protein, C-terminal domain 
C2U31_23555	SM00481	DNA polymerase alpha chain like domain
C2U31_23590	SM00903	Flavin reductase like domain
C2U31_23610	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_23615	SM00849	Metallo-beta-lactamase superfamily
C2U31_23635	SM00382	ATPases associated with a variety of cellular activities
C2U31_23660	SM00448	cheY-homologous receiver domain
C2U31_23660	SM00862	Transcriptional regulatory protein, C terminal
C2U31_23665	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U31_23665	SM00387	Histidine kinase-like ATPases
C2U31_23665	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_23680	SM00382	ATPases associated with a variety of cellular activities
C2U31_23710	SM00822	C2U31_23710
C2U31_23725	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_23750	SM00382	ATPases associated with a variety of cellular activities
C2U31_23770	SM00382	ATPases associated with a variety of cellular activities
C2U31_23815	SM00271	DnaJ molecular chaperone homology domain
C2U31_23840	SM00226	Low molecular weight phosphatase family
C2U31_23845	SM00487	DEAD-like helicases superfamily
C2U31_23845	SM00490	helicase superfamily c-terminal domain
C2U31_23860	SM00382	ATPases associated with a variety of cellular activities
C2U31_23860	SM00464	Found in ATP-dependent protease La (LON)
C2U31_23865	SM00382	ATPases associated with a variety of cellular activities
C2U31_23865	SM00994	ClpX C4-type zinc finger
C2U31_23865	SM01086	C-terminal, D2-small domain, of ClpB protein
C2U31_23895	SM00357	Cold shock protein domain
C2U31_23905	SM00357	Cold shock protein domain
C2U31_23935	SM01119	C2U31_23935
C2U31_24020	SM01230	C2U31_24020
C2U31_24025	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_24070	SM00382	ATPases associated with a variety of cellular activities
C2U31_24085	SM00965	Secretin and TonB N terminus short domain
C2U31_24095	SM00830	Chorismate mutase type II
C2U31_24130	SM00904	Riboflavin kinase
C2U31_24160	SM00346	helix_turn_helix isocitrate lyase regulation
C2U31_24165	SM00421	helix_turn_helix, Lux Regulon
C2U31_24165	SM00448	cheY-homologous receiver domain
C2U31_24175	SM00912	haemagglutination activity domain
C2U31_24230	SM00382	ATPases associated with a variety of cellular activities
C2U31_24245	SM00062	Bacterial periplasmic substrate-binding proteins
C2U31_24295	SM00382	ATPases associated with a variety of cellular activities
C2U31_24300	SM00382	ATPases associated with a variety of cellular activities
C2U31_24340	SM00382	ATPases associated with a variety of cellular activities
C2U31_24340	SM01086	C-terminal, D2-small domain, of ClpB protein
C2U31_24350	SM01359	C2U31_24350
C2U31_24350	SM01360	C2U31_24350
C2U31_24360	SM00357	Cold shock protein domain
C2U31_24380	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U31_24380	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U31_24390	SM00248	ankyrin repeats
C2U31_24435	SM00822	C2U31_24435
C2U31_24480	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_24480	SM00895	C2U31_24480
C2U31_24485	SM01130	C2U31_24485
C2U31_24490	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_24510	SM00878	Biotin carboxylase C-terminal domain
C2U31_24525	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_24545	SM00382	ATPases associated with a variety of cellular activities
C2U31_24555	SM00347	helix_turn_helix multiple antibiotic resistance protein
C2U31_24590	SM00822	C2U31_24590
C2U31_24595	SM01005	Alanine racemase, C-terminal domain
C2U31_24700	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_24700	SM00895	C2U31_24700
C2U31_24705	SM01007	Class II Aldolase and Adducin N-terminal domain
C2U31_24725	SM00382	ATPases associated with a variety of cellular activities
C2U31_24745	SM00382	ATPases associated with a variety of cellular activities
C2U31_24745	SM01086	C-terminal, D2-small domain, of ClpB protein
C2U31_24755	SM00100	Cyclic nucleotide-monophosphate binding domain
C2U31_24755	SM00419	helix_turn_helix, cAMP Regulatory protein
C2U31_24780	SM00829	Enoylreductase
C2U31_24805	SM00421	helix_turn_helix, Lux Regulon
C2U31_24805	SM00448	cheY-homologous receiver domain
C2U31_24810	SM00729	Elongator protein 3, MiaB family, Radical SAM
C2U31_24825	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_24825	SM00895	C2U31_24825
C2U31_24865	SM00382	ATPases associated with a variety of cellular activities
C2U31_24885	SM00354	helix_turn _helix lactose operon repressor
C2U31_24915	SM00091	PAS domain
C2U31_24915	SM00267	diguanylate cyclase
C2U31_24965	SM00257	Lysin motif
C2U31_24970	SM00859	Semialdehyde dehydrogenase, NAD binding domain
C2U31_24975	SM01329	C2U31_24975
C2U31_25000	SM00382	ATPases associated with a variety of cellular activities
C2U31_25010	SM00421	helix_turn_helix, Lux Regulon
C2U31_25015	SM00327	von Willebrand factor (vWF) type A domain
C2U31_25025	SM00052	Putative diguanylate phosphodiesterase
C2U31_25025	SM00267	diguanylate cyclase
C2U31_25055	SM00052	Putative diguanylate phosphodiesterase
C2U31_25055	SM00267	diguanylate cyclase
C2U31_25060	SM00052	Putative diguanylate phosphodiesterase
C2U31_25060	SM00267	diguanylate cyclase
C2U31_25065	SM00387	Histidine kinase-like ATPases
C2U31_25065	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_25070	SM00448	cheY-homologous receiver domain
C2U31_25070	SM00862	Transcriptional regulatory protein, C terminal
C2U31_25090	SM00116	Domain in cystathionine beta-synthase and other proteins.
C2U31_25120	SM00240	Forkhead associated domain
C2U31_25130	SM00858	C2U31_25130
C2U31_25160	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
C2U31_25170	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_25175	SM00450	Rhodanese Homology Domain
C2U31_25185	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U31_25185	SM00387	Histidine kinase-like ATPases
C2U31_25185	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_25195	SM00387	Histidine kinase-like ATPases
C2U31_25195	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_25200	SM00448	cheY-homologous receiver domain
C2U31_25200	SM00862	Transcriptional regulatory protein, C terminal
C2U31_25300	SM00400	zinc finger
C2U31_25300	SM00493	C2U31_25300
C2U31_25300	SM00766	DNA primase DnaG DnaB-binding
C2U31_25315	SM00354	helix_turn _helix lactose operon repressor
C2U31_25340	SM00788	Adenylosuccinate synthetase
C2U31_25350	SM00244	prohibitin homologues
C2U31_25355	SM00244	prohibitin homologues
C2U31_25375	SM00382	ATPases associated with a variety of cellular activities
C2U31_25380	SM00564	beta-propeller repeat
C2U31_25410	SM00562	C2U31_25410
C2U31_25440	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
C2U31_25500	SM00347	helix_turn_helix multiple antibiotic resistance protein
C2U31_25525	SM00434	DNA Topoisomerase IV
C2U31_25535	SM00387	Histidine kinase-like ATPases
C2U31_25535	SM00433	TopoisomeraseII
C2U31_25545	SM00357	Cold shock protein domain
C2U31_25545	SM00382	ATPases associated with a variety of cellular activities
C2U31_25545	SM00959	Rho termination factor, N-terminal domain
C2U31_25555	SM00989	C2U31_25555
C2U31_25590	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_25605	SM00421	helix_turn_helix, Lux Regulon
C2U31_25625	SM00849	Metallo-beta-lactamase superfamily
C2U31_25665	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_25705	SM00829	Enoylreductase
C2U31_25720	SM00347	helix_turn_helix multiple antibiotic resistance protein
C2U31_25745	SM01329	C2U31_25745
C2U31_25760	SM01209	C2U31_25760
C2U31_25760	SM01210	C2U31_25760
C2U31_25795	SM00387	Histidine kinase-like ATPases
C2U31_25795	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_25800	SM00382	ATPases associated with a variety of cellular activities
C2U31_25800	SM00448	cheY-homologous receiver domain
C2U31_25840	SM00841	Elongation factor P, C-terminal
C2U31_25840	SM01185	C2U31_25840
C2U31_25855	SM00382	ATPases associated with a variety of cellular activities
C2U31_25870	SM00028	Tetratricopeptide repeats
C2U31_25900	SM00858	C2U31_25900
C2U31_25945	SM00347	helix_turn_helix multiple antibiotic resistance protein
C2U31_25950	SM00382	ATPases associated with a variety of cellular activities
C2U31_25970	SM00318	Staphylococcal nuclease homologues
C2U31_26015	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_26130	SM00421	helix_turn_helix, Lux Regulon
C2U31_26135	SM00421	helix_turn_helix, Lux Regulon
C2U31_26205	SM00347	helix_turn_helix multiple antibiotic resistance protein
C2U31_26210	SM00382	ATPases associated with a variety of cellular activities
C2U31_26220	SM00882	Coenzyme A transferase
C2U31_26225	SM00882	Coenzyme A transferase
C2U31_26250	SM00346	helix_turn_helix isocitrate lyase regulation
C2U31_26270	SM00530	Helix-turn-helix XRE-family like proteins 
C2U31_26335	SM00478	endonuclease III
C2U31_26340	SM00840	C2U31_26340
C2U31_26370	SM01091	Transporter associated domain
C2U31_26380	SM00900	C2U31_26380
C2U31_26390	SM00710	Parallel beta-helix repeats
C2U31_26390	SM00722	Domain present in carbohydrate binding proteins and sugar hydrolses
C2U31_26395	SM00382	ATPases associated with a variety of cellular activities
C2U31_26430	SM00346	helix_turn_helix isocitrate lyase regulation
C2U31_26505	SM00829	Enoylreductase
C2U31_26615	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
C2U31_26615	SM00534	ATPase domain of DNA mismatch repair MUTS family
C2U31_26620	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
C2U31_26635	SM01130	C2U31_26635
C2U31_26675	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
C2U31_26730	SM00155	Phospholipase D. Active site motifs.
C2U31_26760	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
C2U31_26765	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_26785	SM00869	Autotransporter beta-domain
C2U31_26835	SM00530	Helix-turn-helix XRE-family like proteins 
C2U31_26855	SM00062	Bacterial periplasmic substrate-binding proteins
C2U31_26860	SM00382	ATPases associated with a variety of cellular activities
C2U31_26920	SM00560	LamG-like jellyroll fold domain
C2U31_26930	SM00912	haemagglutination activity domain
C2U31_26945	SM00965	Secretin and TonB N terminus short domain
C2U31_26960	SM00530	Helix-turn-helix XRE-family like proteins 
C2U31_26965	SM01007	Class II Aldolase and Adducin N-terminal domain
C2U31_26980	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_26995	SM00098	Alkaline phosphatase homologues
C2U31_27000	SM00098	Alkaline phosphatase homologues
C2U31_27045	SM00347	helix_turn_helix multiple antibiotic resistance protein
C2U31_27090	SM00382	ATPases associated with a variety of cellular activities
C2U31_27095	SM00382	ATPases associated with a variety of cellular activities
C2U31_27100	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
C2U31_27190	SM00448	cheY-homologous receiver domain
C2U31_27190	SM00862	Transcriptional regulatory protein, C terminal
C2U31_27265	SM00382	ATPases associated with a variety of cellular activities
C2U31_27280	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U31_27280	SM00387	Histidine kinase-like ATPases
C2U31_27280	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_27285	SM00448	cheY-homologous receiver domain
C2U31_27285	SM00862	Transcriptional regulatory protein, C terminal
C2U31_27305	SM00382	ATPases associated with a variety of cellular activities
C2U31_27330	SM00965	Secretin and TonB N terminus short domain
C2U31_27345	SM00861	Transketolase, pyrimidine binding domain
C2U31_27355	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_27355	SM00895	C2U31_27355
C2U31_27365	SM00822	C2U31_27365
C2U31_27380	SM00382	ATPases associated with a variety of cellular activities
C2U31_27385	SM00382	ATPases associated with a variety of cellular activities
C2U31_27390	SM00829	Enoylreductase
C2U31_27435	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
C2U31_27440	SM00028	Tetratricopeptide repeats
C2U31_27460	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_27465	SM01119	C2U31_27465
C2U31_27480	SM00382	ATPases associated with a variety of cellular activities
C2U31_27485	SM00062	Bacterial periplasmic substrate-binding proteins
C2U31_27500	SM00354	helix_turn _helix lactose operon repressor
C2U31_27530	SM00710	Parallel beta-helix repeats
C2U31_27530	SM00869	Autotransporter beta-domain
C2U31_27560	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_27560	SM00895	C2U31_27560
C2U31_27565	SM00382	ATPases associated with a variety of cellular activities
C2U31_27585	SM00344	helix_turn_helix ASNC type
C2U31_27600	SM00052	Putative diguanylate phosphodiesterase
C2U31_27605	SM00267	diguanylate cyclase
C2U31_27650	SM00382	ATPases associated with a variety of cellular activities
C2U31_27695	SM00382	ATPases associated with a variety of cellular activities
C2U31_27705	SM01103	C2U31_27705
C2U31_27715	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U31_27715	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U31_27735	SM00855	Phosphoglycerate mutase family
C2U31_27740	SM00822	C2U31_27740
C2U31_27750	SM00851	MGS-like domain
C2U31_27750	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
C2U31_27755	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
C2U31_27775	SM00382	ATPases associated with a variety of cellular activities
C2U31_27790	SM00493	C2U31_27790
C2U31_27800	SM00382	ATPases associated with a variety of cellular activities
C2U31_27850	SM00829	Enoylreductase
C2U31_27900	SM00382	ATPases associated with a variety of cellular activities
C2U31_27910	SM00062	Bacterial periplasmic substrate-binding proteins
C2U31_27910	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
C2U31_27920	SM00346	helix_turn_helix isocitrate lyase regulation
C2U31_27925	SM00062	Bacterial periplasmic substrate-binding proteins
C2U31_28010	SM00479	C2U31_28010
C2U31_28020	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
C2U31_28020	SM00091	PAS domain
C2U31_28020	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U31_28025	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_28035	SM00382	ATPases associated with a variety of cellular activities
C2U31_28055	SM00116	Domain in cystathionine beta-synthase and other proteins.
C2U31_28105	SM01001	AIR carboxylase
C2U31_28155	SM00382	ATPases associated with a variety of cellular activities
C2U31_28160	SM00382	ATPases associated with a variety of cellular activities
C2U31_28185	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_28185	SM00866	C2U31_28185
C2U31_28200	SM00072	Guanylate kinase homologues.
C2U31_28215	SM00857	Resolvase, N terminal domain
C2U31_28270	SM00382	ATPases associated with a variety of cellular activities
C2U31_28280	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
C2U31_28290	SM00316	Ribosomal protein S1-like RNA-binding domain
C2U31_28310	SM00852	Probable molybdopterin binding domain
C2U31_28340	SM00271	DnaJ molecular chaperone homology domain
C2U31_28395	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
C2U31_28400	SM00861	Transketolase, pyrimidine binding domain
C2U31_28425	SM00919	Malic enzyme, NAD binding domain
C2U31_28425	SM01274	C2U31_28425
C2U31_28490	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
C2U31_28505	SM00382	ATPases associated with a variety of cellular activities
C2U31_28520	SM00448	cheY-homologous receiver domain
C2U31_28520	SM01012	C2U31_28520
C2U31_28545	SM00903	Flavin reductase like domain
C2U31_28555	SM00346	helix_turn_helix isocitrate lyase regulation
C2U31_28570	SM01323	C2U31_28570
C2U31_28605	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
C2U31_28610	SM00014	Acid phosphatase homologues
C2U31_28615	SM00729	Elongator protein 3, MiaB family, Radical SAM
C2U31_28630	SM01091	Transporter associated domain
C2U31_28675	SM00729	Elongator protein 3, MiaB family, Radical SAM
C2U31_28675	SM00876	Biotin and Thiamin Synthesis associated domain
C2U31_28725	SM00852	Probable molybdopterin binding domain
C2U31_28730	SM00852	Probable molybdopterin binding domain
C2U31_28740	SM00729	Elongator protein 3, MiaB family, Radical SAM
C2U31_28755	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
C2U31_28760	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
C2U31_28760	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
C2U31_28825	SM00387	Histidine kinase-like ATPases
C2U31_28830	SM00448	cheY-homologous receiver domain
C2U31_28830	SM00862	Transcriptional regulatory protein, C terminal
C2U31_28905	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_28905	SM00895	C2U31_28905
C2U31_28910	SM00796	Allophanate hydrolase subunit 1
C2U31_28910	SM00797	Allophanate hydrolase subunit 2
C2U31_28910	SM00878	Biotin carboxylase C-terminal domain
C2U31_28940	SM00382	ATPases associated with a variety of cellular activities
C2U31_28965	SM00421	helix_turn_helix, Lux Regulon
C2U31_28965	SM00448	cheY-homologous receiver domain
C2U31_28970	SM00387	Histidine kinase-like ATPases
C2U31_28975	SM00014	Acid phosphatase homologues
C2U31_28985	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_28985	SM00478	endonuclease III
C2U31_28985	SM01009	AlkA N-terminal domain
C2U31_28995	SM00382	ATPases associated with a variety of cellular activities
C2U31_29015	SM00965	Secretin and TonB N terminus short domain
C2U31_29080	SM00344	helix_turn_helix ASNC type
C2U31_29095	SM00062	Bacterial periplasmic substrate-binding proteins
C2U31_29105	SM00382	ATPases associated with a variety of cellular activities
C2U31_29130	SM00257	Lysin motif
C2U31_29165	SM00387	Histidine kinase-like ATPases
C2U31_29170	SM00448	cheY-homologous receiver domain
C2U31_29230	SM00919	Malic enzyme, NAD binding domain
C2U31_29230	SM01274	C2U31_29230
C2U31_29240	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_29250	SM00347	helix_turn_helix multiple antibiotic resistance protein
C2U31_29265	SM00822	C2U31_29265
C2U31_29285	SM00530	Helix-turn-helix XRE-family like proteins 
C2U31_29290	SM00155	Phospholipase D. Active site motifs.
C2U31_29345	SM00052	Putative diguanylate phosphodiesterase
C2U31_29350	SM00244	prohibitin homologues
C2U31_29365	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_29400	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_29485	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_29495	SM00248	ankyrin repeats
C2U31_29540	SM00387	Histidine kinase-like ATPases
C2U31_29540	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_29540	SM00448	cheY-homologous receiver domain
C2U31_29545	SM00052	Putative diguanylate phosphodiesterase
C2U31_29545	SM00448	cheY-homologous receiver domain
C2U31_29550	SM00387	Histidine kinase-like ATPases
C2U31_29550	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_29550	SM00448	cheY-homologous receiver domain
C2U31_29555	SM00421	helix_turn_helix, Lux Regulon
C2U31_29555	SM00448	cheY-homologous receiver domain
C2U31_29645	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U31_29645	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U31_29650	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U31_29650	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U31_29670	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_29670	SM00895	C2U31_29670
C2U31_29675	SM00062	Bacterial periplasmic substrate-binding proteins
C2U31_29730	SM00062	Bacterial periplasmic substrate-binding proteins
C2U31_29745	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_29760	SM00422	helix_turn_helix, mercury resistance
C2U31_29765	SM00422	helix_turn_helix, mercury resistance
C2U31_29815	SM00382	ATPases associated with a variety of cellular activities
C2U31_29870	SM00421	helix_turn_helix, Lux Regulon
C2U31_29870	SM00448	cheY-homologous receiver domain
C2U31_29885	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_29905	SM00382	ATPases associated with a variety of cellular activities
C2U31_29910	SM00382	ATPases associated with a variety of cellular activities
C2U31_29940	SM00869	Autotransporter beta-domain
C2U31_29960	SM00886	Stress responsive A/B Barrel Domain
C2U31_30015	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
C2U31_30020	SM00421	helix_turn_helix, Lux Regulon
C2U31_30020	SM00448	cheY-homologous receiver domain
C2U31_30025	SM00387	Histidine kinase-like ATPases
C2U31_30025	SM00388	His Kinase A (phosphoacceptor) domain
C2U31_30025	SM00448	cheY-homologous receiver domain
C2U31_30040	SM00100	Cyclic nucleotide-monophosphate binding domain
C2U31_30040	SM00419	helix_turn_helix, cAMP Regulatory protein
C2U31_30060	SM00869	Autotransporter beta-domain
C2U31_30080	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U31_30080	SM00895	C2U31_30080
C2U31_30105	SM00912	haemagglutination activity domain
C2U31_30120	SM00965	Secretin and TonB N terminus short domain
C2U31_30150	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
C2U31_30175	SM01400	C2U31_30175
C2U31_30210	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_30225	SM00382	ATPases associated with a variety of cellular activities
C2U31_30235	SM00822	C2U31_30235
C2U31_30240	SM00882	Coenzyme A transferase
C2U31_30245	SM00882	Coenzyme A transferase
C2U31_30250	SM00342	helix_turn_helix, arabinose operon control protein
C2U31_30265	SM00883	Chaperonin 10 Kd subunit
C2U31_30300	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
