locus-tag	class	description
KYT87_00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
KYT87_00010	COG0592	DNA-directed DNA polymerase activity
KYT87_00025	COG0583	DNA-binding transcription factor activity
KYT87_00035	COG0765	amino acid transport
KYT87_00040	COG0765	amino acid transport
KYT87_00045	COG1126	abc transporter atp-binding protein
KYT87_00070	COG1304	FMN binding
KYT87_00080	COG3842	ATPase activity
KYT87_00085	COG1176	ABC-type spermidine putrescine transport system, permease component I
KYT87_00090	COG1177	transmembrane transport
KYT87_00150	COG2188	Transcriptional regulator
KYT87_00160	COG3842	ATPase activity
KYT87_00165	COG1176	ABC-type spermidine putrescine transport system, permease component I
KYT87_00170	COG1177	transmembrane transport
KYT87_00195	COG0251	oxidation-reduction process
KYT87_00200	COG0402	S-adenosylhomocysteine deaminase activity
KYT87_00210	COG4603	Belongs to the binding-protein-dependent transport system permease family
KYT87_00215	COG3845	ABC transporter
KYT87_00240	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
KYT87_00245	COG2910	NAD(P)H-binding
KYT87_00255	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
KYT87_00280	COG3781	membrane
KYT87_00285	COG1522	sequence-specific DNA binding
KYT87_00290	COG0028	Belongs to the TPP enzyme family
KYT87_00295	COG1028	Short-chain dehydrogenase reductase Sdr
KYT87_00300	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
KYT87_00305	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
KYT87_00315	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
KYT87_00315	COG0551	DNA topoisomerase type I activity
KYT87_00325	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
KYT87_00330	COG2922	Belongs to the Smg family
KYT87_00340	COG2358	TRAP transporter, solute receptor (TAXI family
KYT87_00355	COG0765	amino acid transport
KYT87_00360	COG0765	amino acid transport
KYT87_00365	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
KYT87_00370	COG0583	DNA-binding transcription factor activity
KYT87_00385	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
KYT87_00400	COG2207	Transcriptional regulator
KYT87_00405	COG0300	oxidoreductase activity
KYT87_00415	COG0583	DNA-binding transcription factor activity
KYT87_00430	COG3321	synthase
KYT87_00430	COG0604	alcohol dehydrogenase
KYT87_00430	COG1028	Short-chain dehydrogenase reductase Sdr
KYT87_00475	COG1280	lysine exporter protein (LysE YggA)
KYT87_00485	COG4133	protoheme IX ABC transporter activity
KYT87_00490	COG0693	protein deglycase activity
KYT87_00510	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
KYT87_00515	COG0183	Belongs to the thiolase family
KYT87_00520	COG4579	[isocitrate dehydrogenase (NADP+)] phosphatase activity
KYT87_00525	COG1960	acyl-CoA dehydrogenase activity
KYT87_00530	COG1473	amidohydrolase
KYT87_00545	COG1742	UPF0060 membrane protein
KYT87_00565	COG0778	Nitroreductase
KYT87_00585	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
KYT87_00610	COG0395	ABC-type sugar transport system, permease component
KYT87_00615	COG1175	transmembrane transport
KYT87_00620	COG1653	transport
KYT87_00625	COG3842	ATPase activity
KYT87_00630	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
KYT87_00635	COG1609	Transcriptional regulator
KYT87_00645	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
KYT87_00660	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
KYT87_00690	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
KYT87_00695	COG1280	lysine exporter protein (LysE YggA)
KYT87_00700	COG0513	Belongs to the DEAD box helicase family
KYT87_00720	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
KYT87_00725	COG0601	transmembrane transport
KYT87_00730	COG0747	negative chemotaxis
KYT87_00735	COG1160	GTP binding
KYT87_00765	COG0583	DNA-binding transcription factor activity
KYT87_00780	COG0154	amidase activity
KYT87_00800	COG2969	positive regulation of protein catabolic process
KYT87_00805	COG0625	glutathione transferase activity
KYT87_00810	COG2857	Cytochrome c1
KYT87_00815	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
KYT87_00820	COG0723	plastoquinol--plastocyanin reductase activity
KYT87_00825	COG1970	mechanosensitive ion channel activity
KYT87_00830	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
KYT87_00850	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
KYT87_00855	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
KYT87_00860	COG0537	adenosine 5'-monophosphoramidase activity
KYT87_00865	COG0140	phosphoribosyl-ATP diphosphatase activity
KYT87_00870	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
KYT87_00875	COG0107	imidazoleglycerol-phosphate synthase activity
KYT87_00880	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
KYT87_00885	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
KYT87_00890	COG0131	Imidazoleglycerol-phosphate dehydratase
KYT87_00895	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
KYT87_00900	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
KYT87_00905	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
KYT87_00910	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
KYT87_00915	COG5007	Belongs to the BolA IbaG family
KYT87_00920	COG0842	Transport permease protein
KYT87_00925	COG1131	(ABC) transporter
KYT87_00935	COG2853	Lipoprotein
KYT87_00940	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
KYT87_00945	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
KYT87_00950	COG1127	ABC transporter
KYT87_00970	COG0583	DNA-binding transcription factor activity
KYT87_00985	COG0069	glutamate synthase activity
KYT87_00985	COG0070	glutamate synthase
KYT87_00985	COG0067	glutamate synthase
KYT87_01010	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
KYT87_01030	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
KYT87_01065	COG1612	heme a metabolic process
KYT87_01075	COG1999	signal sequence binding
KYT87_01095	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
KYT87_01105	COG2814	Major facilitator Superfamily
KYT87_01135	COG1289	transmembrane transporter activity
KYT87_01145	COG1566	PFAM secretion protein HlyD family protein
KYT87_01160	COG0457	Tetratricopeptide repeat
KYT87_01165	COG0438	transferase activity, transferring glycosyl groups
KYT87_01190	COG1560	Kdo2-lipid A biosynthetic process
KYT87_01190	COG4783	chaperone-mediated protein folding
KYT87_01195	COG3866	Pectate lyase
KYT87_01210	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
KYT87_01220	COG1566	PFAM secretion protein HlyD family protein
KYT87_01245	COG0243	molybdopterin cofactor binding
KYT87_01265	COG0656	L-ascorbic acid biosynthetic process
KYT87_01270	COG0583	DNA-binding transcription factor activity
KYT87_01280	COG2814	Major facilitator Superfamily
KYT87_01285	COG0583	DNA-binding transcription factor activity
KYT87_01290	COG2200	EAL domain
KYT87_01295	COG1595	DNA-templated transcription, initiation
KYT87_01300	COG4944	Protein of unknown function (DUF1109)
KYT87_01335	COG1522	sequence-specific DNA binding
KYT87_01340	COG2423	ornithine cyclodeaminase activity
KYT87_01350	COG5001	Diguanylate cyclase
KYT87_01355	COG0218	Necessary for normal cell division and for the maintenance of normal septation
KYT87_01360	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
KYT87_01390	COG2188	Transcriptional regulator
KYT87_01405	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
KYT87_01420	COG1228	amidohydrolase
KYT87_01430	COG0840	transmembrane signaling receptor activity
KYT87_01435	COG2814	Major facilitator Superfamily
KYT87_01480	COG1802	Transcriptional regulator
KYT87_01490	COG3069	C4-dicarboxylate transmembrane transporter activity
KYT87_01495	COG1012	belongs to the aldehyde dehydrogenase family
KYT87_01515	COG3585	molybdate ion transport
KYT87_01520	COG3064	Membrane
KYT87_01555	COG1607	acyl-coa hydrolase
KYT87_01570	COG0437	4 iron, 4 sulfur cluster binding
KYT87_01575	COG2864	formate dehydrogenase
KYT87_01585	COG1921	L-seryl-tRNASec selenium transferase activity
KYT87_01590	COG3276	selenocysteine insertion sequence binding
KYT87_01615	COG0583	DNA-binding transcription factor activity
KYT87_01630	COG1012	belongs to the aldehyde dehydrogenase family
KYT87_01635	COG3284	Transcriptional regulator
KYT87_01640	COG0134	indole-3-glycerol-phosphate synthase activity
KYT87_01645	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
KYT87_01650	COG0512	Glutamine amidotransferase of anthranilate synthase
KYT87_01660	COG0546	phosphoglycolate phosphatase activity
KYT87_01665	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
KYT87_01670	COG2967	ApaG domain
KYT87_01675	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
KYT87_01680	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
KYT87_01690	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
KYT87_01695	COG0037	tRNA processing
KYT87_01720	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
KYT87_01735	COG3121	Chaperone
KYT87_01740	COG3188	usher protein
KYT87_01750	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
KYT87_01755	COG1024	Enoyl-CoA hydratase
KYT87_01770	COG0356	it plays a direct role in the translocation of protons across the membrane
KYT87_01785	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
KYT87_01790	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
KYT87_01795	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
KYT87_01800	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
KYT87_01805	COG0355	proton-transporting ATP synthase activity, rotational mechanism
KYT87_01815	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
KYT87_01820	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
KYT87_01825	COG0210	DNA helicase
KYT87_01840	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
KYT87_01850	COG2171	N-acyltransferase activity
KYT87_01855	COG2195	Cleaves the N-terminal amino acid of tripeptides
KYT87_01865	COG4608	Belongs to the ABC transporter superfamily
KYT87_01870	COG0444	Belongs to the ABC transporter superfamily
KYT87_01880	COG0601	transmembrane transport
KYT87_01885	COG0747	negative chemotaxis
KYT87_01895	COG0747	negative chemotaxis
KYT87_01905	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
KYT87_01910	COG1024	Enoyl-CoA hydratase
KYT87_01915	COG1024	Enoyl-CoA hydratase
KYT87_01925	COG1309	transcriptional regulator
KYT87_01935	COG1804	L-carnitine dehydratase bile acid-inducible protein F
KYT87_01940	COG1250	3-hydroxyacyl-CoA dehydrogenase
KYT87_01970	COG0179	Fumarylacetoacetate (FAA) hydrolase
KYT87_01990	COG1129	ABC transporter
KYT87_02000	COG1802	Transcriptional regulator
KYT87_02005	COG0657	acetylesterase activity
KYT87_02010	COG0583	DNA-binding transcription factor activity
KYT87_02030	COG2918	glutathione biosynthetic process
KYT87_02055	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
KYT87_02065	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
KYT87_02065	COG2813	Specifically methylates the guanine in position
KYT87_02070	COG2223	nitrite transmembrane transporter activity
KYT87_02080	COG2860	membrane
KYT87_02085	COG1802	Transcriptional regulator
KYT87_02095	COG0583	DNA-binding transcription factor activity
KYT87_02100	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
KYT87_02115	COG2132	Multicopper oxidase
KYT87_02120	COG0642	Histidine kinase
KYT87_02135	COG0745	RESPONSE REGULATOR receiver
KYT87_02140	COG2226	methyltransferase
KYT87_02155	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
KYT87_02165	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
KYT87_02175	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
KYT87_02180	COG0351	phosphomethylpyrimidine kinase
KYT87_02185	COG2022	thiamine diphosphate biosynthetic process
KYT87_02190	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
KYT87_02195	COG4771	TonB-dependent receptor
KYT87_02205	COG1513	Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide
KYT87_02220	COG2186	Transcriptional regulator
KYT87_02225	COG1063	alcohol dehydrogenase
KYT87_02230	COG4948	Mandelate Racemase Muconate Lactonizing
KYT87_02235	COG0246	Mannitol dehydrogenase
KYT87_02240	COG2226	methyltransferase
KYT87_02250	COG1194	a g-specific adenine glycosylase
KYT87_02265	COG0477	Major facilitator Superfamily
KYT87_02275	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
KYT87_02280	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
KYT87_02295	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
KYT87_02305	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
KYT87_02320	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
KYT87_02345	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
KYT87_02415	COG1028	Short-chain dehydrogenase reductase Sdr
KYT87_02420	COG1024	Enoyl-CoA hydratase
KYT87_02445	COG2207	Transcriptional regulator
KYT87_02460	COG4638	Rieske (2fe-2S)
KYT87_02465	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
KYT87_02470	COG1335	isochorismatase
KYT87_02475	COG1028	Short-chain dehydrogenase reductase Sdr
KYT87_02485	COG0741	lytic transglycosylase activity
KYT87_02490	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
KYT87_02495	COG0352	thiamine-phosphate diphosphorylase activity
KYT87_02510	COG1678	Uncharacterized ACR, COG1678
KYT87_02515	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
KYT87_02525	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
KYT87_02540	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
KYT87_02545	COG0436	Aminotransferase
KYT87_02550	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
KYT87_02560	COG0765	amino acid transport
KYT87_02565	COG1126	abc transporter atp-binding protein
KYT87_02570	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
KYT87_02580	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
KYT87_02585	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
KYT87_02595	COG3842	ATPase activity
KYT87_02600	COG1175	transmembrane transport
KYT87_02605	COG1840	ABC-type Fe3 transport system, periplasmic component
KYT87_02620	COG0557	exoribonuclease II activity
KYT87_02625	COG3150	esterase
KYT87_02630	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
KYT87_02635	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
KYT87_02640	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
KYT87_02645	COG0511	ligase activity, forming carbon-carbon bonds
KYT87_02650	COG0439	Biotin carboxylase
KYT87_02655	COG2264	protein methyltransferase activity
KYT87_02665	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
KYT87_02665	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
KYT87_02690	COG1696	Membrane protein involved in D-alanine export
KYT87_02695	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
KYT87_02725	COG1522	sequence-specific DNA binding
KYT87_02735	COG2814	Major facilitator Superfamily
KYT87_02740	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
KYT87_02745	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
KYT87_02745	COG1042	CoA-binding domain protein
KYT87_02745	COG0045	succinate-CoA ligase (ADP-forming) activity
KYT87_02750	COG1335	isochorismatase
KYT87_02755	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
KYT87_02760	COG1116	anion transmembrane transporter activity
KYT87_02775	COG3028	Belongs to the UPF0307 family
KYT87_02780	COG0312	modulator of DNA gyrase
KYT87_02785	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
KYT87_02795	COG0559	Belongs to the binding-protein-dependent transport system permease family
KYT87_02800	COG4177	L-phenylalanine transmembrane transporter activity
KYT87_02815	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
KYT87_02820	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
KYT87_02825	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
KYT87_02835	COG0316	Belongs to the HesB IscA family
KYT87_02840	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
KYT87_02850	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
KYT87_02855	COG1881	PFAM PEBP family protein
KYT87_02860	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
KYT87_02865	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
KYT87_02880	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
KYT87_02880	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
KYT87_02885	COG2766	serine protein kinase
KYT87_02890	COG2718	Belongs to the UPF0229 family
KYT87_02895	COG2719	SpoVR family
KYT87_02930	COG3188	usher protein
KYT87_02955	COG3181	Tripartite tricarboxylate transporter family receptor
KYT87_02975	COG0741	lytic transglycosylase activity
KYT87_02975	COG1388	LysM domain
KYT87_02980	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
KYT87_02985	COG2226	methyltransferase
KYT87_02990	COG0328	RNA-DNA hybrid ribonuclease activity
KYT87_03000	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
KYT87_03005	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
KYT87_03020	COG1671	Belongs to the UPF0178 family
KYT87_03030	COG2358	TRAP transporter, solute receptor (TAXI family
KYT87_03035	COG0786	glutamate:sodium symporter activity
KYT87_03045	COG0463	Glycosyl transferase, family 2
KYT87_03060	COG0583	DNA-binding transcription factor activity
KYT87_03095	COG1129	ABC transporter
KYT87_03100	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
KYT87_03115	COG0697	spore germination
KYT87_03120	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
KYT87_03135	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
KYT87_03150	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
KYT87_03155	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
KYT87_03170	COG0823	Involved in the tonB-independent uptake of proteins
KYT87_03180	COG0848	biopolymer transport protein
KYT87_03185	COG0811	peptide transport
KYT87_03190	COG0824	Thioesterase
KYT87_03225	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
KYT87_03240	COG2084	Dehydrogenase
KYT87_03285	COG0129	dihydroxy-acid dehydratase activity
KYT87_03290	COG4654	Cytochrome c, class I
KYT87_03295	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
KYT87_03305	COG1522	sequence-specific DNA binding
KYT87_03365	COG1473	amidohydrolase
KYT87_03370	COG0418	dihydroorotase activity
KYT87_03375	COG0488	(ABC) transporter
KYT87_03385	COG2001	Belongs to the MraZ family
KYT87_03390	COG0275	rRNA processing
KYT87_03395	COG3116	cell division
KYT87_03405	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
KYT87_03410	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
KYT87_03415	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
KYT87_03425	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
KYT87_03430	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
KYT87_03435	COG1181	Belongs to the D-alanine--D-alanine ligase family
KYT87_03440	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
KYT87_03450	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
KYT87_03455	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
KYT87_03465	COG0739	heme binding
KYT87_03470	COG0653	protein targeting
KYT87_03490	COG0028	Belongs to the TPP enzyme family
KYT87_03495	COG0300	oxidoreductase activity
KYT87_03500	COG1522	sequence-specific DNA binding
KYT87_03515	COG2239	Acts as a magnesium transporter
KYT87_03525	COG2855	membrane
KYT87_03535	COG1473	amidohydrolase
KYT87_03540	COG0318	PFAM AMP-dependent synthetase and ligase
KYT87_03550	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
KYT87_03550	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
KYT87_03555	COG1501	Belongs to the glycosyl hydrolase 31 family
KYT87_03560	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
KYT87_03565	COG2011	ABC-type metal ion transport system permease component
KYT87_03585	COG3210	domain, Protein
KYT87_03585	COG2911	Protein conserved in bacteria
KYT87_03595	COG0840	transmembrane signaling receptor activity
KYT87_03600	COG0583	DNA-binding transcription factor activity
KYT87_03610	COG0735	belongs to the Fur family
KYT87_03625	COG2818	Glycosylase
KYT87_03630	COG1368	sulfuric ester hydrolase activity
KYT87_03635	COG2982	Protein involved in outer membrane biogenesis
KYT87_03640	COG3706	GGDEF domain
KYT87_03645	COG1309	transcriptional regulator
KYT87_03650	COG1028	Short-chain dehydrogenase reductase Sdr
KYT87_03815	COG2154	pterin-4-alpha-carbinolamine dehydratase
KYT87_03830	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
KYT87_03840	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
KYT87_03855	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
KYT87_03860	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
KYT87_03865	COG1929	Belongs to the glycerate kinase type-1 family
KYT87_03870	COG0469	pyruvate kinase activity
KYT87_03875	COG0700	Nucleoside recognition
KYT87_03885	COG0242	peptide deformylase activity
KYT87_03905	COG0204	Acyl-transferase
KYT87_03910	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
KYT87_03915	COG0751	glycine-tRNA ligase activity
KYT87_03920	COG0752	glycyl-tRNA synthetase alpha subunit
KYT87_03925	COG1024	Enoyl-CoA hydratase
KYT87_03935	COG1804	L-carnitine dehydratase bile acid-inducible protein F
KYT87_03940	COG2030	dehydratase
KYT87_03945	COG1028	Short-chain dehydrogenase reductase Sdr
KYT87_03975	COG2070	2-Nitropropane dioxygenase
KYT87_03985	COG0318	PFAM AMP-dependent synthetase and ligase
KYT87_04000	COG1960	acyl-CoA dehydrogenase activity
KYT87_04010	COG1024	Enoyl-CoA hydratase
KYT87_04015	COG0583	DNA-binding transcription factor activity
KYT87_04020	COG3777	bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
KYT87_04025	COG1804	L-carnitine dehydratase bile acid-inducible protein F
KYT87_04030	COG2301	Belongs to the HpcH HpaI aldolase family
KYT87_04035	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
KYT87_04045	COG0617	tRNA 3'-terminal CCA addition
KYT87_04060	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
KYT87_04065	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
KYT87_04070	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
KYT87_04075	COG0586	Pfam SNARE associated Golgi protein
KYT87_04080	COG0860	N-Acetylmuramoyl-L-alanine amidase
KYT87_04085	COG0802	atpase or kinase
KYT87_04090	COG0114	fumarate hydratase activity
KYT87_04100	COG3181	Tripartite tricarboxylate transporter family receptor
KYT87_04110	COG0405	Gamma-glutamyltransferase
KYT87_04115	COG0531	amino acid
KYT87_04120	COG1804	L-carnitine dehydratase bile acid-inducible protein F
KYT87_04130	COG1960	acyl-CoA dehydrogenase activity
KYT87_04135	COG0583	DNA-binding transcription factor activity
KYT87_04145	COG0579	oxidoreductase
KYT87_04155	COG0259	pyridoxamine-phosphate oxidase activity
KYT87_04170	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
KYT87_04175	COG1136	(ABC) transporter
KYT87_04175	COG0577	efflux transmembrane transporter activity
KYT87_04185	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
KYT87_04220	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
KYT87_04230	COG0800	Aldolase
KYT87_04245	COG1216	Glycosyl transferase, family 2
KYT87_04245	COG0463	Glycosyl transferase, family 2
KYT87_04270	COG1028	Short-chain dehydrogenase reductase Sdr
KYT87_04275	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
KYT87_04300	COG4638	Rieske (2fe-2S)
KYT87_04330	COG0747	negative chemotaxis
KYT87_04335	COG0601	transmembrane transport
KYT87_04340	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
KYT87_04345	COG0444	Belongs to the ABC transporter superfamily
KYT87_04350	COG4608	Belongs to the ABC transporter superfamily
KYT87_04365	COG0488	(ABC) transporter
KYT87_04380	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
KYT87_04385	COG2894	cell division
KYT87_04390	COG0850	regulation of cytokinetic process
KYT87_04395	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
KYT87_04400	COG1271	oxidase subunit
KYT87_04410	COG0514	ATP-dependent DNA helicase (RecQ)
KYT87_04430	COG2255	four-way junction helicase activity
KYT87_04445	COG0632	four-way junction helicase activity
KYT87_04450	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
KYT87_04470	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
KYT87_04480	COG0006	proline dipeptidase activity
KYT87_04495	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
KYT87_04500	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
KYT87_04515	COG4783	chaperone-mediated protein folding
KYT87_04520	COG0429	hydrolase of the alpha beta-hydrolase fold
KYT87_04545	COG0513	Belongs to the DEAD box helicase family
KYT87_04560	COG1546	Belongs to the CinA family
KYT87_04560	COG1058	Belongs to the CinA family
KYT87_04565	COG1414	Transcriptional regulator
KYT87_04580	COG0167	dihydroorotate dehydrogenase activity
KYT87_04585	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
KYT87_04675	COG0629	single-stranded DNA binding
KYT87_04680	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
KYT87_04695	COG0789	Transcriptional regulator
KYT87_04705	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
KYT87_04740	COG0789	Transcriptional regulator
KYT87_04890	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
KYT87_04895	COG1569	PIN domain
KYT87_04900	COG3311	Transcriptional regulator
KYT87_04955	COG2003	Belongs to the UPF0758 family
KYT87_05030	COG1695	Transcriptional regulator
KYT87_05040	COG0798	PFAM Bile acid sodium symporter
KYT87_05055	COG0640	Transcriptional regulator
KYT87_05060	COG5002	protein histidine kinase activity
KYT87_05065	COG0745	RESPONSE REGULATOR receiver
KYT87_05070	COG2132	Multicopper oxidase
KYT87_05110	COG0583	DNA-binding transcription factor activity
KYT87_05115	COG1396	sequence-specific DNA binding
KYT87_05145	COG0582	viral genome integration into host DNA
KYT87_05175	COG0446	pyridine nucleotide-disulphide oxidoreductase
KYT87_05175	COG1902	pentaerythritol trinitrate reductase activity
KYT87_05180	COG0247	lactate metabolic process
KYT87_05180	COG2181	nitrate reductase activity
KYT87_05185	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
KYT87_05195	COG4638	Rieske (2fe-2S)
KYT87_05210	COG1063	alcohol dehydrogenase
KYT87_05230	COG0404	The glycine cleavage system catalyzes the degradation of glycine
KYT87_05230	COG0446	pyridine nucleotide-disulphide oxidoreductase
KYT87_05260	COG1459	type II secretion system
KYT87_05290	COG1450	Type ii and iii secretion system protein
KYT87_05295	COG2165	general secretion pathway protein
KYT87_05310	COG0745	RESPONSE REGULATOR receiver
KYT87_05315	COG2205	protein histidine kinase activity
KYT87_05330	COG3397	chitin binding
KYT87_05335	COG3397	chitin binding
KYT87_05360	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
KYT87_05365	COG0735	belongs to the Fur family
KYT87_05370	COG0497	DNA recombination
KYT87_05380	COG1420	regulation of RNA biosynthetic process
KYT87_05385	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
KYT87_05395	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
KYT87_05405	COG0443	Heat shock 70 kDa protein
KYT87_05410	COG0484	heat shock protein binding
KYT87_05420	COG0612	Peptidase, M16
KYT87_05445	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
KYT87_05475	COG0840	transmembrane signaling receptor activity
KYT87_05480	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
KYT87_05495	COG0745	RESPONSE REGULATOR receiver
KYT87_05500	COG2205	protein histidine kinase activity
KYT87_05505	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
KYT87_05510	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
KYT87_05515	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
KYT87_05530	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
KYT87_05550	COG1193	negative regulation of DNA recombination
KYT87_05555	COG0492	ferredoxin-NADP+ reductase activity
KYT87_05560	COG1674	ftsk spoiiie
KYT87_05565	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
KYT87_05570	COG0251	oxidation-reduction process
KYT87_05575	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
KYT87_05580	COG0517	IMP dehydrogenase activity
KYT87_05580	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
KYT87_05600	COG0601	transmembrane transport
KYT87_05615	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
KYT87_05620	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
KYT87_05625	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
KYT87_05655	COG0126	phosphoglycerate kinase activity
KYT87_05675	COG0477	Major facilitator Superfamily
KYT87_05680	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
KYT87_05685	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
KYT87_05705	COG1028	Short-chain dehydrogenase reductase Sdr
KYT87_05710	COG3022	response to hydroperoxide
KYT87_05715	COG1289	transmembrane transporter activity
KYT87_05720	COG0028	Belongs to the TPP enzyme family
KYT87_05725	COG0440	acetolactate synthase activity
KYT87_05730	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
KYT87_05735	COG1183	phosphatidylcholine synthase activity
KYT87_05745	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
KYT87_05750	COG1185	polyribonucleotide nucleotidyltransferase activity
KYT87_05760	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
KYT87_05795	COG3181	Tripartite tricarboxylate transporter family receptor
KYT87_05810	COG0604	alcohol dehydrogenase
KYT87_05810	COG1028	Short-chain dehydrogenase reductase Sdr
KYT87_05810	COG3321	synthase
KYT87_05815	COG0149	triose-phosphate isomerase activity
KYT87_05820	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
KYT87_05840	COG2365	Tyrosine phosphatase family
KYT87_05870	COG0583	DNA-binding transcription factor activity
KYT87_05880	COG2203	Gaf domain
KYT87_05880	COG2199	diguanylate cyclase activity
KYT87_05940	COG0642	Histidine kinase
KYT87_05950	COG2851	Citrate transporter
KYT87_05955	COG1028	Short-chain dehydrogenase reductase Sdr
KYT87_05980	COG1278	Cold shock
KYT87_05990	COG2354	Protein conserved in bacteria
KYT87_06010	COG4172	Belongs to the ABC transporter superfamily
KYT87_06020	COG4166	transmembrane transport
KYT87_06025	COG0747	negative chemotaxis
KYT87_06040	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
KYT87_06055	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
KYT87_06060	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
KYT87_06065	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
KYT87_06100	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
KYT87_06125	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
KYT87_06130	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
KYT87_06135	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
KYT87_06140	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
KYT87_06150	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
KYT87_06160	COG1034	ATP synthesis coupled electron transport
KYT87_06165	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
KYT87_06170	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
KYT87_06180	COG0713	ATP synthesis coupled electron transport
KYT87_06195	COG1007	ATP synthesis coupled electron transport
KYT87_06205	COG4774	siderophore transport
KYT87_06210	COG0560	Phosphoserine phosphatase
KYT87_06215	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
KYT87_06220	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
KYT87_06225	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
KYT87_06235	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
KYT87_06240	COG0450	alkyl hydroperoxide reductase
KYT87_06255	COG1214	PFAM Peptidase M22, glycoprotease
KYT87_06260	COG1573	uracil-dna glycosylase
KYT87_06265	COG0477	Major facilitator Superfamily
KYT87_06270	COG1196	nuclear chromosome segregation
KYT87_06280	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
KYT87_06285	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
KYT87_06295	COG2917	probably involved in intracellular septation
KYT87_06300	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
KYT87_06305	COG1122	ATPase activity
KYT87_06310	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
KYT87_06320	COG1268	BioY protein
KYT87_06350	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
KYT87_06385	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
KYT87_06390	COG2878	Part of a membrane complex involved in electron transport
KYT87_06415	COG0251	oxidation-reduction process
KYT87_06425	COG3228	Belongs to the MtfA family
KYT87_06430	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
KYT87_06450	COG0159	tryptophan synthase activity
KYT87_06455	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
KYT87_06460	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
KYT87_06465	COG1530	ribonuclease E activity
KYT87_06475	COG0546	phosphoglycolate phosphatase activity
KYT87_06480	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
KYT87_06485	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
KYT87_06490	COG3023	N-Acetylmuramoyl-L-alanine amidase
KYT87_06500	COG0424	maF-like protein
KYT87_06505	COG1399	metal-binding, possibly nucleic acid-binding protein
KYT87_06510	COG0333	Belongs to the bacterial ribosomal protein bL32 family
KYT87_06515	COG0416	fatty acid biosynthetic process
KYT87_06520	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
KYT87_06525	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
KYT87_06535	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
KYT87_06540	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
KYT87_06560	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
KYT87_06570	COG0681	Belongs to the peptidase S26 family
KYT87_06575	COG0571	ribonuclease III activity
KYT87_06580	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
KYT87_06585	COG1381	Involved in DNA repair and RecF pathway recombination
KYT87_06605	COG3181	Tripartite tricarboxylate transporter family receptor
KYT87_06635	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
KYT87_06660	COG0583	DNA-binding transcription factor activity
KYT87_06670	COG0791	NLP P60 protein
KYT87_06680	COG3193	protein, possibly involved in utilization of glycolate and propanediol
KYT87_06690	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
KYT87_06695	COG0697	spore germination
KYT87_06700	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
KYT87_06705	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
KYT87_06710	COG1802	Transcriptional regulator
KYT87_06745	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
KYT87_06770	COG2153	protein acetylation
KYT87_06780	COG1446	asparaginase
KYT87_06785	COG4172	Belongs to the ABC transporter superfamily
KYT87_06790	COG0747	negative chemotaxis
KYT87_06825	COG0504	CTP synthase activity
KYT87_06835	COG0148	phosphopyruvate hydratase activity
KYT87_06850	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
KYT87_06885	COG1981	membrane
KYT87_06905	COG0039	L-malate dehydrogenase activity
KYT87_06910	COG2188	Transcriptional regulator
KYT87_06915	COG2009	succinate dehydrogenase
KYT87_06920	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
KYT87_06925	COG1053	succinate dehydrogenase
KYT87_06930	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
KYT87_06935	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
KYT87_06940	COG0372	Belongs to the citrate synthase family
KYT87_06955	COG0280	phosphate acetyltransferase
KYT87_06955	COG0281	malic enzyme
KYT87_06965	COG1297	OPT oligopeptide transporter protein
KYT87_06970	COG2233	PERMEase
KYT87_06975	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
KYT87_07000	COG2515	1-aminocyclopropane-1-carboxylate deaminase
KYT87_07005	COG1522	sequence-specific DNA binding
KYT87_07010	COG0567	Dehydrogenase, E1 component
KYT87_07015	COG0508	dehydrogenase complex catalyzes the overall conversion of
KYT87_07020	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
KYT87_07025	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
KYT87_07030	COG1595	DNA-templated transcription, initiation
KYT87_07035	COG3712	iron ion homeostasis
KYT87_07040	COG4774	siderophore transport
KYT87_07045	COG1840	ABC-type Fe3 transport system, periplasmic component
KYT87_07055	COG3842	ATPase activity
KYT87_07060	COG0483	inositol monophosphate 1-phosphatase activity
KYT87_07070	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
KYT87_07080	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
KYT87_07115	COG2183	response to ionizing radiation
KYT87_07120	COG1199	ATP-dependent helicase activity
KYT87_07130	COG0564	pseudouridine synthase activity
KYT87_07135	COG1496	oxidoreductase activity
KYT87_07140	COG3243	poly(R)-hydroxyalkanoic acid synthase
KYT87_07145	COG1028	Short-chain dehydrogenase reductase Sdr
KYT87_07150	COG5394	Polyhydroxyalkanoate synthesis repressor PhaR
KYT87_07165	COG0672	)-iron permease
KYT87_07190	COG3237	CsbD-like
KYT87_07195	COG0189	ligase activity
KYT87_07195	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
KYT87_07200	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
KYT87_07200	COG0189	ligase activity
KYT87_07205	COG1132	(ABC) transporter
KYT87_07220	COG2833	Protein of unknown function (DUF455)
KYT87_07225	COG2258	MOSC domain
KYT87_07230	COG2951	lytic endotransglycosylase activity
KYT87_07250	COG1215	transferase activity, transferring glycosyl groups
KYT87_07260	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
KYT87_07295	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
KYT87_07310	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
KYT87_07320	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
KYT87_07325	COG0287	Prephenate dehydrogenase
KYT87_07330	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
KYT87_07335	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
KYT87_07355	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
KYT87_07360	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
KYT87_07365	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
KYT87_07380	COG2951	lytic endotransglycosylase activity
KYT87_07385	COG0123	including yeast histone deacetylase and acetoin utilization protein
KYT87_07410	COG2985	domain, Protein
KYT87_07415	COG1960	acyl-CoA dehydrogenase activity
KYT87_07420	COG0450	alkyl hydroperoxide reductase
KYT87_07430	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
KYT87_07435	COG4208	sulfate ABC transporter
KYT87_07440	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
KYT87_07445	COG0175	sulfate reduction
KYT87_07475	COG0335	large ribosomal subunit rRNA binding
KYT87_07485	COG1162	GTPase activity
KYT87_07490	COG0501	Belongs to the peptidase M48B family
KYT87_07495	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
KYT87_07500	COG3327	negative regulation of DNA-templated transcription, initiation
KYT87_07505	COG3396	Phenylacetate-CoA oxygenase
KYT87_07510	COG3460	Phenylacetate-CoA oxygenase
KYT87_07515	COG3396	Phenylacetate-CoA oxygenase
KYT87_07520	COG2151	metal-sulfur cluster biosynthetic enzyme
KYT87_07525	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
KYT87_07530	COG1012	belongs to the aldehyde dehydrogenase family
KYT87_07535	COG1024	Enoyl-CoA hydratase
KYT87_07540	COG2050	protein possibly involved in aromatic compounds catabolism
KYT87_07550	COG0534	Mate efflux family protein
KYT87_07560	COG0254	rRNA binding
KYT87_07565	COG3483	tryptophan 2,3-dioxygenase activity
KYT87_07570	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
KYT87_07575	COG2003	Belongs to the UPF0758 family
KYT87_07580	COG0544	peptidyl-prolyl cis-trans isomerase activity
KYT87_07585	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
KYT87_07590	COG0625	glutathione transferase activity
KYT87_07595	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
KYT87_07600	COG0642	Histidine kinase
KYT87_07620	COG0523	cobalamin synthesis protein
KYT87_07625	COG0583	DNA-binding transcription factor activity
KYT87_07640	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
KYT87_07645	COG1187	pseudouridine synthase activity
KYT87_07650	COG0779	Required for maturation of 30S ribosomal subunits
KYT87_07655	COG2251	uridine kinase activity
KYT87_07655	COG0195	Participates in both transcription termination and antitermination
KYT87_07660	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
KYT87_07665	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
KYT87_07670	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
KYT87_07675	COG1217	gtp-binding protein TYPA
KYT87_07685	COG0583	DNA-binding transcription factor activity
KYT87_07690	COG1611	Belongs to the LOG family
KYT87_07700	COG0428	transporter
KYT87_07710	COG1283	sodium-dependent phosphate transmembrane transporter activity
KYT87_07715	COG1760	l-serine dehydratase
KYT87_07720	COG0501	Belongs to the peptidase M48B family
KYT87_07745	COG3842	ATPase activity
KYT87_07755	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
KYT87_07765	COG0492	ferredoxin-NADP+ reductase activity
KYT87_07780	COG3181	Tripartite tricarboxylate transporter family receptor
KYT87_07790	COG1722	exodeoxyribonuclease VII activity
KYT87_07795	COG0142	geranyltranstransferase activity
KYT87_07805	COG1469	GTP cyclohydrolase I activity
KYT87_07810	COG3739	integral membrane protein
KYT87_07815	COG0360	Binds together with S18 to 16S ribosomal RNA
KYT87_07820	COG2965	DNA replication, synthesis of RNA primer
KYT87_07825	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
KYT87_07830	COG0359	binds to the 23S rRNA
KYT87_07840	COG0305	Participates in initiation and elongation during chromosome replication
KYT87_07850	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
KYT87_07885	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
KYT87_07935	COG0540	Belongs to the ATCase OTCase family
KYT87_07970	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
KYT87_07975	COG2137	regulation of response to DNA damage stimulus
KYT87_07990	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
KYT87_08000	COG0045	succinate-CoA ligase (ADP-forming) activity
KYT87_08005	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
KYT87_08010	COG0861	Integral membrane protein TerC family
KYT87_08015	COG0861	Integral membrane protein TerC family
KYT87_08020	COG0181	hydroxymethylbilane synthase activity
KYT87_08040	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
KYT87_08050	COG1028	Short-chain dehydrogenase reductase Sdr
KYT87_08065	COG1028	Short-chain dehydrogenase reductase Sdr
KYT87_08080	COG0559	Belongs to the binding-protein-dependent transport system permease family
KYT87_08100	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
KYT87_08105	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
KYT87_08135	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
KYT87_08140	COG0308	aminopeptidase N
KYT87_08155	COG0312	modulator of DNA gyrase
KYT87_08160	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
KYT87_08165	COG0277	FAD linked oxidase domain protein
KYT87_08170	COG0277	FAD linked oxidase domain protein
KYT87_08175	COG0277	FAD linked oxidase domain protein
KYT87_08180	COG0247	lactate metabolic process
KYT87_08210	COG0583	DNA-binding transcription factor activity
KYT87_08215	COG0482	sulfurtransferase activity
KYT87_08220	COG0730	response to heat
KYT87_08225	COG0625	glutathione transferase activity
KYT87_08235	COG3909	cytochrome
KYT87_08280	COG0697	spore germination
KYT87_08325	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
KYT87_08330	COG0069	glutamate synthase activity
KYT87_08335	COG2391	methyltransferase activity
KYT87_08340	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
KYT87_08355	COG2153	protein acetylation
KYT87_08380	COG0557	exoribonuclease II activity
KYT87_08385	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
KYT87_08390	COG0626	cystathionine gamma-synthase activity
KYT87_08395	COG3128	pkhd-type hydroxylase
KYT87_08400	COG0776	regulation of translation
KYT87_08430	COG0642	Histidine kinase
KYT87_08435	COG3158	transport of potassium into the cell
KYT87_08440	COG0137	argininosuccinate synthase activity
KYT87_08475	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
KYT87_08480	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
KYT87_08500	COG0747	negative chemotaxis
KYT87_08505	COG0601	transmembrane transport
KYT87_08525	COG0444	Belongs to the ABC transporter superfamily
KYT87_08530	COG4608	Belongs to the ABC transporter superfamily
KYT87_08535	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
KYT87_08535	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
KYT87_08545	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
KYT87_08550	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
KYT87_08560	COG3642	lipopolysaccharide core region biosynthetic process
KYT87_08565	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
KYT87_08570	COG3842	ATPase activity
KYT87_08575	COG1176	ABC-type spermidine putrescine transport system, permease component I
KYT87_08580	COG1177	transmembrane transport
KYT87_08610	COG1960	acyl-CoA dehydrogenase activity
KYT87_08615	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
KYT87_08620	COG0704	Plays a role in the regulation of phosphate uptake
KYT87_08630	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
KYT87_08635	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
KYT87_08635	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
KYT87_08640	COG1643	Atp-dependent helicase
KYT87_08655	COG0438	transferase activity, transferring glycosyl groups
KYT87_08660	COG0726	polysaccharide deacetylase
KYT87_08670	COG0438	transferase activity, transferring glycosyl groups
KYT87_08675	COG0726	polysaccharide deacetylase
KYT87_08700	COG1132	(ABC) transporter
KYT87_08705	COG0475	glutathione-regulated potassium exporter activity
KYT87_08705	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
KYT87_08710	COG3706	GGDEF domain
KYT87_08710	COG5001	Diguanylate cyclase
KYT87_08710	COG2203	Gaf domain
KYT87_08710	COG4251	negative regulation of phosphorylation
KYT87_08720	COG1530	ribonuclease E activity
KYT87_08755	COG2204	response regulator
KYT87_08760	COG4191	Histidine kinase
KYT87_08765	COG1301	dicarboxylic acid transport
KYT87_08775	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
KYT87_08780	COG0799	negative regulation of ribosome biogenesis
KYT87_08785	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
KYT87_08795	COG0151	Belongs to the GarS family
KYT87_08800	COG0217	transcriptional regulatory protein
KYT87_08805	COG0433	COG0433 Predicted ATPase
KYT87_08810	COG0473	3-isopropylmalate dehydrogenase activity
KYT87_08820	COG2814	Major facilitator Superfamily
KYT87_08825	COG1566	PFAM secretion protein HlyD family protein
KYT87_08865	COG3391	amine dehydrogenase activity
KYT87_08875	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
KYT87_08895	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
KYT87_08900	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
KYT87_08910	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
KYT87_08920	COG0187	DNA topoisomerase II activity
KYT87_08935	COG2311	Membrane
KYT87_08940	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
KYT87_08965	COG0662	Cupin 2, conserved barrel domain protein
KYT87_08970	COG5285	phytanoyl-CoA dioxygenase
KYT87_08975	COG0633	Ferredoxin
KYT87_08975	COG3217	Mosc domain protein beta barrel domain protein
KYT87_08980	COG2076	Multidrug Resistance protein
KYT87_08985	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
KYT87_08995	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
KYT87_09045	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
KYT87_09050	COG0425	Belongs to the sulfur carrier protein TusA family
KYT87_09060	COG0228	four-way junction DNA binding
KYT87_09065	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
KYT87_09070	COG0336	Belongs to the RNA methyltransferase TrmD family
KYT87_09075	COG1396	sequence-specific DNA binding
KYT87_09080	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
KYT87_09085	COG0765	amino acid transport
KYT87_09090	COG1126	abc transporter atp-binding protein
KYT87_09095	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
KYT87_09100	COG0525	valine-tRNA ligase activity
KYT87_09105	COG0105	UTP biosynthetic process
KYT87_09110	COG0820	rRNA (adenine-C2-)-methyltransferase activity
KYT87_09130	COG2976	Protein conserved in bacteria
KYT87_09135	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
KYT87_09140	COG1160	GTP binding
KYT87_09145	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
KYT87_09150	COG1923	regulation of RNA biosynthetic process
KYT87_09155	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
KYT87_09160	COG0330	HflC and HflK could
KYT87_09165	COG0330	HflC and HflK could
KYT87_09170	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
KYT87_09175	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
KYT87_09180	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
KYT87_09185	COG0828	Belongs to the bacterial ribosomal protein bS21 family
KYT87_09205	COG1278	Cold shock
KYT87_09245	COG4964	Belongs to the GSP D family
KYT87_09435	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
KYT87_09460	COG3728	DNA packaging
KYT87_09460	COG5484	DNA packaging
KYT87_09465	COG5410	chromosome segregation
KYT87_09610	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
KYT87_09620	COG1295	ribonuclease BN
KYT87_09630	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
KYT87_09660	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
KYT87_09710	COG1538	Outer membrane efflux protein
KYT87_09730	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
KYT87_09740	COG0101	tRNA pseudouridine synthase activity
KYT87_09745	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
KYT87_09750	COG0135	phosphoribosylanthranilate isomerase activity
KYT87_09780	COG0129	dihydroxy-acid dehydratase activity
KYT87_09785	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
KYT87_09790	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
KYT87_09795	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
KYT87_09800	COG1609	Transcriptional regulator
KYT87_09820	COG4172	Belongs to the ABC transporter superfamily
KYT87_09825	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
KYT87_09830	COG0601	transmembrane transport
KYT87_09845	COG2186	Transcriptional regulator
KYT87_09855	COG0635	Involved in the biosynthesis of porphyrin-containing compound
KYT87_09860	COG2197	response regulator
KYT87_09865	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
KYT87_09870	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
KYT87_09885	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
KYT87_09890	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
KYT87_09895	COG0004	ammonium transporteR
KYT87_09900	COG0347	Belongs to the P(II) protein family
KYT87_09905	COG2960	long-chain fatty acid transporting porin activity
KYT87_09915	COG0291	Belongs to the bacterial ribosomal protein bL35 family
KYT87_09920	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
KYT87_09925	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
KYT87_09930	COG0072	phenylalanine-tRNA ligase activity
KYT87_09930	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
KYT87_09965	COG0384	phenazine biosynthesis protein PhzF
KYT87_09970	COG0456	acetyltransferase
KYT87_09995	COG1522	sequence-specific DNA binding
KYT87_10025	COG0583	DNA-binding transcription factor activity
KYT87_10030	COG3181	Tripartite tricarboxylate transporter family receptor
KYT87_10060	COG5265	(ABC) transporter
KYT87_10065	COG0656	L-ascorbic acid biosynthetic process
KYT87_10080	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
KYT87_10090	COG1917	Cupin 2, conserved barrel domain protein
KYT87_10090	COG4977	sequence-specific DNA binding
KYT87_10095	COG2223	nitrite transmembrane transporter activity
KYT87_10125	COG1610	YqeY-like protein
KYT87_10135	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
KYT87_10140	COG1028	Short-chain dehydrogenase reductase Sdr
KYT87_10150	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
KYT87_10190	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
KYT87_10200	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
KYT87_10205	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
KYT87_10230	COG1959	2 iron, 2 sulfur cluster binding
KYT87_10235	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
KYT87_10240	COG0506	proline dehydrogenase activity
KYT87_10255	COG0583	DNA-binding transcription factor activity
KYT87_10260	COG2814	Major facilitator Superfamily
KYT87_10265	COG0583	DNA-binding transcription factor activity
KYT87_10275	COG0625	glutathione transferase activity
KYT87_10290	COG2814	Major facilitator Superfamily
KYT87_10295	COG1960	acyl-CoA dehydrogenase activity
KYT87_10300	COG0318	PFAM AMP-dependent synthetase and ligase
KYT87_10320	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
KYT87_10335	COG1280	lysine exporter protein (LysE YggA)
KYT87_10355	COG0697	spore germination
KYT87_10360	COG0697	spore germination
KYT87_10375	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
KYT87_10390	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
KYT87_10395	COG1274	phosphoenolpyruvate carboxykinase (GTP) activity
KYT87_10430	COG0477	Major facilitator Superfamily
KYT87_10445	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
KYT87_10450	COG0604	alcohol dehydrogenase
KYT87_10455	COG1309	transcriptional regulator
KYT87_10460	COG3181	Tripartite tricarboxylate transporter family receptor
KYT87_10465	COG1960	acyl-CoA dehydrogenase activity
KYT87_10475	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
KYT87_10480	COG1396	sequence-specific DNA binding
KYT87_10510	COG4235	cytochrome complex assembly
KYT87_10520	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
KYT87_10550	COG4133	protoheme IX ABC transporter activity
KYT87_10555	COG3005	denitrification pathway
KYT87_10560	COG3043	anaerobic respiration
KYT87_10580	COG3246	L-lysine catabolic process to acetate
KYT87_10585	COG1250	3-hydroxyacyl-CoA dehydrogenase
KYT87_10590	COG0583	DNA-binding transcription factor activity
KYT87_10625	COG1012	belongs to the aldehyde dehydrogenase family
KYT87_10630	COG0307	riboflavin synthase, alpha
KYT87_10640	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
KYT87_10650	COG0789	Transcriptional regulator
KYT87_10660	COG1595	DNA-templated transcription, initiation
KYT87_10665	COG3712	iron ion homeostasis
KYT87_10670	COG4774	siderophore transport
KYT87_10680	COG0022	dehydrogenase e1 component
KYT87_10705	COG0165	Argininosuccinate lyase
KYT87_10710	COG0668	transmembrane transport
KYT87_10770	COG2165	general secretion pathway protein
KYT87_10830	COG0583	DNA-binding transcription factor activity
KYT87_10840	COG0747	negative chemotaxis
KYT87_10845	COG0601	transmembrane transport
KYT87_10850	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
KYT87_10855	COG4172	Belongs to the ABC transporter superfamily
KYT87_10860	COG4681	YaeQ
KYT87_10895	COG2188	Transcriptional regulator
KYT87_10925	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
KYT87_10930	COG0066	3-isopropylmalate dehydratase activity
KYT87_10945	COG1335	isochorismatase
KYT87_10960	COG0668	transmembrane transport
KYT87_10965	COG2985	domain, Protein
KYT87_10975	COG3161	chorismate lyase activity
KYT87_10980	COG1187	pseudouridine synthase activity
KYT87_10985	COG0583	DNA-binding transcription factor activity
KYT87_11010	COG1999	signal sequence binding
KYT87_11020	COG0339	signal peptide processing
KYT87_11025	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
KYT87_11030	COG4566	intracellular signal transduction
KYT87_11045	COG0508	dehydrogenase complex catalyzes the overall conversion of
KYT87_11050	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
KYT87_11090	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
KYT87_11100	COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase activity
KYT87_11110	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
KYT87_11150	COG2204	response regulator
KYT87_11160	COG0835	chemotaxis
KYT87_11165	COG0840	transmembrane signaling receptor activity
KYT87_11170	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
KYT87_11175	COG2201	protein-glutamate methylesterase activity
KYT87_11180	COG0745	RESPONSE REGULATOR receiver
KYT87_11185	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
KYT87_11190	COG0840	transmembrane signaling receptor activity
KYT87_11200	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
KYT87_11215	COG2747	anti-sigma28 factor FlgM
KYT87_11225	COG1815	bacterial-type flagellum-dependent cell motility
KYT87_11230	COG1558	bacterial-type flagellum-dependent cell motility
KYT87_11245	COG4787	bacterial-type flagellum-dependent cell motility
KYT87_11280	COG0840	transmembrane signaling receptor activity
KYT87_11285	COG0840	transmembrane signaling receptor activity
KYT87_11300	COG0840	transmembrane signaling receptor activity
KYT87_11330	COG1987	bacterial-type flagellum assembly
KYT87_11345	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
KYT87_11355	COG1580	Controls the rotational direction of flagella during chemotaxis
KYT87_11375	COG1317	bacterial-type flagellum organization
KYT87_11380	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
KYT87_11390	COG1677	Flagellar hook-basal body complex protein FliE
KYT87_11400	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
KYT87_11440	COG1804	L-carnitine dehydratase bile acid-inducible protein F
KYT87_11445	COG3181	Tripartite tricarboxylate transporter family receptor
KYT87_11455	COG0285	dihydrofolate synthase activity
KYT87_11465	COG1286	toxin biosynthetic process
KYT87_11475	COG0277	FAD linked oxidase domain protein
KYT87_11480	COG2186	Transcriptional regulator
KYT87_11485	COG1451	nucleotide metabolic process
KYT87_11490	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
KYT87_11500	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
KYT87_11505	COG0024	Methionine aminopeptidase
KYT87_11510	COG0052	Belongs to the universal ribosomal protein uS2 family
KYT87_11515	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
KYT87_11520	COG0528	UMP kinase activity
KYT87_11525	COG0233	cytoplasmic translational termination
KYT87_11530	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
KYT87_11535	COG0575	Belongs to the CDS family
KYT87_11540	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
KYT87_11545	COG0750	zinc metalloprotease
KYT87_11550	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
KYT87_11555	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
KYT87_11560	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
KYT87_11565	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
KYT87_11580	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
KYT87_11585	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
KYT87_11610	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
KYT87_11610	COG2169	Transcriptional regulator
KYT87_11615	COG0519	Catalyzes the synthesis of GMP from XMP
KYT87_11615	COG0518	GMP synthase (glutamine-hydrolyzing) activity
KYT87_11635	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
KYT87_11645	COG2914	Belongs to the UPF0125 (RnfH) family
KYT87_11655	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
KYT87_11680	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
KYT87_11685	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
KYT87_11690	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
KYT87_11695	COG0084	hydrolase, TatD family'
KYT87_11710	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
KYT87_11715	COG0765	amino acid transport
KYT87_11720	COG1126	abc transporter atp-binding protein
KYT87_11725	COG0010	Belongs to the arginase family
KYT87_11730	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
KYT87_11740	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
KYT87_11765	COG0625	glutathione transferase activity
KYT87_11775	COG1522	sequence-specific DNA binding
KYT87_11780	COG0386	Belongs to the glutathione peroxidase family
KYT87_11805	COG1804	L-carnitine dehydratase bile acid-inducible protein F
KYT87_11830	COG0513	Belongs to the DEAD box helicase family
KYT87_11835	COG1414	Transcriptional regulator
KYT87_11865	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
KYT87_11870	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
KYT87_11875	COG4521	taurine ABC transporter
KYT87_11880	COG0840	transmembrane signaling receptor activity
KYT87_11885	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
KYT87_11910	COG1966	Carbon starvation protein
KYT87_11915	COG2879	small protein
KYT87_11970	COG3971	2-oxopent-4-enoate hydratase activity
KYT87_11975	COG0179	Fumarylacetoacetate (FAA) hydrolase
KYT87_11995	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
KYT87_12000	COG1414	Transcriptional regulator
KYT87_12050	COG0747	negative chemotaxis
KYT87_12055	COG4608	Belongs to the ABC transporter superfamily
KYT87_12060	COG0444	Belongs to the ABC transporter superfamily
KYT87_12065	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
KYT87_12070	COG0601	transmembrane transport
KYT87_12075	COG2072	flavoprotein involved in K transport
KYT87_12095	COG0288	reversible hydration of carbon dioxide
KYT87_12100	COG0633	Ferredoxin
KYT87_12120	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
KYT87_12130	COG0583	DNA-binding transcription factor activity
KYT87_12155	COG0519	Catalyzes the synthesis of GMP from XMP
KYT87_12155	COG0518	GMP synthase (glutamine-hydrolyzing) activity
KYT87_12180	COG0583	DNA-binding transcription factor activity
KYT87_12200	COG0625	glutathione transferase activity
KYT87_12210	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
KYT87_12220	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
KYT87_12225	COG5001	Diguanylate cyclase
KYT87_12240	COG1902	pentaerythritol trinitrate reductase activity
KYT87_12245	COG4221	oxidoreductase activity
KYT87_12270	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
KYT87_12275	COG0459	protein refolding
KYT87_12280	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
KYT87_12335	COG1199	ATP-dependent helicase activity
KYT87_12340	COG0477	Major facilitator Superfamily
KYT87_12345	COG0583	DNA-binding transcription factor activity
KYT87_12355	COG0840	transmembrane signaling receptor activity
KYT87_12385	COG3706	GGDEF domain
KYT87_12385	COG2203	Gaf domain
KYT87_12385	COG5001	Diguanylate cyclase
KYT87_12385	COG4251	negative regulation of phosphorylation
KYT87_12415	COG0318	PFAM AMP-dependent synthetase and ligase
KYT87_12420	COG1960	acyl-CoA dehydrogenase activity
KYT87_12425	COG1960	acyl-CoA dehydrogenase activity
KYT87_12430	COG0183	Belongs to the thiolase family
KYT87_12435	COG1024	Enoyl-CoA hydratase
KYT87_12435	COG1250	3-hydroxyacyl-CoA dehydrogenase
KYT87_12440	COG0583	DNA-binding transcription factor activity
KYT87_12445	COG0628	permease
KYT87_12450	COG2733	membrane
KYT87_12520	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
KYT87_12530	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
KYT87_12540	COG1028	Short-chain dehydrogenase reductase Sdr
KYT87_12545	COG0583	DNA-binding transcription factor activity
KYT87_12565	COG0583	DNA-binding transcription factor activity
KYT87_12575	COG0697	spore germination
KYT87_12585	COG4941	Belongs to the sigma-70 factor family
KYT87_12595	COG3795	YCII-related domain
KYT87_12600	COG1487	ribonuclease activity
KYT87_12605	COG4691	Plasmid stability protein
KYT87_12610	COG3795	YCII-related domain
KYT87_12615	COG1360	Flagellar Motor Protein
KYT87_12620	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
KYT87_12630	COG1683	Conserved Protein
KYT87_12650	COG1309	transcriptional regulator
KYT87_12655	COG3181	Tripartite tricarboxylate transporter family receptor
KYT87_12675	COG4608	Belongs to the ABC transporter superfamily
KYT87_12680	COG0444	Belongs to the ABC transporter superfamily
KYT87_12685	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
KYT87_12690	COG0601	transmembrane transport
KYT87_12700	COG1802	Transcriptional regulator
KYT87_12705	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
KYT87_12715	COG0667	Aldo Keto reductase
KYT87_12725	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
KYT87_12730	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
KYT87_12740	COG0477	Major facilitator Superfamily
KYT87_12750	COG1414	Transcriptional regulator
KYT87_12760	COG2764	glyoxalase bleomycin resistance protein dioxygenase
KYT87_12780	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
KYT87_12790	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
KYT87_12795	COG0765	amino acid transport
KYT87_12800	COG0765	amino acid transport
KYT87_12820	COG0587	DNA-directed DNA polymerase activity
KYT87_12835	COG0833	amino acid
KYT87_12840	COG0400	carboxylic ester hydrolase activity
KYT87_12850	COG1028	Short-chain dehydrogenase reductase Sdr
KYT87_12860	COG0028	Belongs to the TPP enzyme family
KYT87_12875	COG1566	PFAM secretion protein HlyD family protein
KYT87_12895	COG0720	synthase
KYT87_12900	COG0602	queuosine metabolic process
KYT87_12915	COG1902	pentaerythritol trinitrate reductase activity
KYT87_12940	COG1289	transmembrane transporter activity
KYT87_12945	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
KYT87_12960	COG0842	Transport permease protein
KYT87_12965	COG1131	(ABC) transporter
KYT87_12980	COG2130	NADP-dependent
KYT87_13005	COG3842	ATPase activity
KYT87_13010	COG3842	ATPase activity
KYT87_13020	COG0395	ABC-type sugar transport system, permease component
KYT87_13040	COG3634	alkyl hydroperoxide reductase activity
KYT87_13045	COG1960	acyl-CoA dehydrogenase activity
KYT87_13080	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
KYT87_13085	COG0420	3'-5' exonuclease activity
KYT87_13115	COG2111	Na H antiporter
KYT87_13115	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
KYT87_13120	COG1006	Multisubunit Na H antiporter MnhC subunit
KYT87_13125	COG0651	ATP synthesis coupled electron transport
KYT87_13130	COG1863	multisubunit Na H antiporter MnhE subunit
KYT87_13135	COG2212	antiporter activity
KYT87_13140	COG1320	monovalent cation:proton antiporter activity
KYT87_13155	COG0590	tRNA wobble adenosine to inosine editing
KYT87_13160	COG1619	proteins homologs of microcin C7 resistance protein MccF
KYT87_13165	COG0488	(ABC) transporter
KYT87_13200	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
KYT87_13205	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
KYT87_13210	COG2252	PERMEase
KYT87_13215	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
KYT87_13220	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
KYT87_13230	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
KYT87_13260	COG0583	DNA-binding transcription factor activity
KYT87_13265	COG2814	Major facilitator Superfamily
KYT87_13270	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
KYT87_13275	COG0789	Transcriptional regulator
KYT87_13290	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
KYT87_13290	COG0678	peroxiredoxin activity
KYT87_13300	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
KYT87_13305	COG0584	glycerophosphoryl diester phosphodiesterase
KYT87_13315	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
KYT87_13325	COG4181	ATPase activity
KYT87_13335	COG1178	ABC-type Fe3 transport system permease component
KYT87_13340	COG3842	ATPase activity
KYT87_13345	COG0583	DNA-binding transcription factor activity
KYT87_13350	COG0560	Phosphoserine phosphatase
KYT87_13370	COG0583	DNA-binding transcription factor activity
KYT87_13385	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
KYT87_13400	COG4336	lyase activity
KYT87_13405	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
KYT87_13445	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
KYT87_13450	COG0765	amino acid transport
KYT87_13455	COG1126	abc transporter atp-binding protein
KYT87_13460	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
KYT87_13465	COG1758	RNA polymerase activity
KYT87_13470	COG0194	GDP metabolic process
KYT87_13475	COG3258	Cytochrome c
KYT87_13480	COG2863	cytochrome
KYT87_13485	COG1028	Short-chain dehydrogenase reductase Sdr
KYT87_13490	COG0791	NLP P60 protein
KYT87_13495	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
KYT87_13500	COG0833	amino acid
KYT87_13505	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
KYT87_13510	COG0583	DNA-binding transcription factor activity
KYT87_13515	COG1561	YicC-like family, N-terminal region
KYT87_13520	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
KYT87_13530	COG1960	acyl-CoA dehydrogenase activity
KYT87_13545	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
KYT87_13550	COG0635	Involved in the biosynthesis of porphyrin-containing compound
KYT87_13555	COG0174	glutamine synthetase
KYT87_13565	COG2204	response regulator
KYT87_13570	COG0583	DNA-binding transcription factor activity
KYT87_13575	COG1741	Belongs to the pirin family
KYT87_13580	COG1741	Belongs to the pirin family
KYT87_13585	COG3181	Tripartite tricarboxylate transporter family receptor
KYT87_13590	COG3842	ATPase activity
KYT87_13600	COG1840	ABC-type Fe3 transport system, periplasmic component
KYT87_13635	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
KYT87_13640	COG0583	DNA-binding transcription factor activity
KYT87_13645	COG0783	Belongs to the Dps family
KYT87_13650	COG0300	oxidoreductase activity
KYT87_13685	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
KYT87_13690	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
KYT87_13700	COG1649	PFAM Uncharacterised BCR, COG1649
KYT87_13700	COG0726	polysaccharide deacetylase
KYT87_13725	COG1215	transferase activity, transferring glycosyl groups
KYT87_13730	COG0156	8-amino-7-oxononanoate synthase activity
KYT87_13735	COG0604	alcohol dehydrogenase
KYT87_13735	COG1028	Short-chain dehydrogenase reductase Sdr
KYT87_13735	COG3321	synthase
KYT87_13750	COG3842	ATPase activity
KYT87_13755	COG0395	ABC-type sugar transport system, permease component
KYT87_13760	COG1175	transmembrane transport
KYT87_13765	COG1653	transport
KYT87_13775	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
KYT87_13785	COG0559	Belongs to the binding-protein-dependent transport system permease family
KYT87_13805	COG1794	racemase activity, acting on amino acids and derivatives
KYT87_13810	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
KYT87_13820	COG0583	DNA-binding transcription factor activity
KYT87_13825	COG0625	glutathione transferase activity
KYT87_13830	COG2133	pyrroloquinoline quinone binding
KYT87_13840	COG0697	spore germination
KYT87_13845	COG2363	Small membrane protein
KYT87_13875	COG1414	Transcriptional regulator
KYT87_13880	COG0010	Belongs to the arginase family
KYT87_13885	COG1464	Belongs to the NlpA lipoprotein family
KYT87_13900	COG1408	metallophosphoesterase
KYT87_13905	COG1304	FMN binding
KYT87_13910	COG0688	phosphatidylethanolamine metabolic process
KYT87_13915	COG0488	(ABC) transporter
KYT87_13920	COG2301	Belongs to the HpcH HpaI aldolase family
KYT87_13935	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
KYT87_13940	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
KYT87_13945	COG2199	diguanylate cyclase activity
KYT87_13945	COG2200	EAL domain
KYT87_13945	COG2203	Gaf domain
KYT87_13960	COG2814	Major facilitator Superfamily
KYT87_14000	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
KYT87_14005	COG2204	response regulator
KYT87_14010	COG2204	response regulator
KYT87_14040	COG1028	Short-chain dehydrogenase reductase Sdr
KYT87_14080	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
KYT87_14095	COG2200	EAL domain
KYT87_14095	COG2199	diguanylate cyclase activity
KYT87_14110	COG0659	secondary active sulfate transmembrane transporter activity
KYT87_14115	COG2863	cytochrome
KYT87_14135	COG1253	flavin adenine dinucleotide binding
KYT87_14145	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
KYT87_14185	COG2807	transmembrane transport
KYT87_14190	COG1846	Transcriptional regulator
KYT87_14215	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
KYT87_14240	COG0628	permease
KYT87_14250	COG1619	proteins homologs of microcin C7 resistance protein MccF
KYT87_14265	COG1959	2 iron, 2 sulfur cluster binding
KYT87_14270	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
KYT87_14275	COG0531	amino acid
KYT87_14295	COG0500	methyltransferase
KYT87_14310	COG1793	dna ligase
KYT87_14315	COG1201	RNA secondary structure unwinding
KYT87_14355	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
KYT87_14355	COG2010	Cytochrome c
KYT87_14360	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
KYT87_14385	COG0179	Fumarylacetoacetate (FAA) hydrolase
KYT87_14410	COG2146	nitrite reductase [NAD(P)H] activity
KYT87_14425	COG3971	2-oxopent-4-enoate hydratase activity
KYT87_14435	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
KYT87_14440	COG0431	NADPH-dependent FMN reductase
KYT87_14455	COG4770	biotin carboxylase activity
KYT87_14460	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
KYT87_14465	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
KYT87_14490	COG3568	Endonuclease Exonuclease Phosphatase
KYT87_14495	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
KYT87_14520	COG0028	Belongs to the TPP enzyme family
KYT87_14525	COG0297	glycogen (starch) synthase activity
KYT87_14530	COG0366	Alpha amylase catalytic
KYT87_14535	COG0366	Alpha amylase catalytic
KYT87_14540	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
KYT87_14550	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
KYT87_14565	COG4773	Receptor
KYT87_14570	COG1408	metallophosphoesterase
KYT87_14610	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
KYT87_14655	COG4608	Belongs to the ABC transporter superfamily
KYT87_14660	COG0444	Belongs to the ABC transporter superfamily
KYT87_14665	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
KYT87_14670	COG0601	transmembrane transport
KYT87_14685	COG2186	Transcriptional regulator
KYT87_14690	COG0747	negative chemotaxis
KYT87_14695	COG0601	transmembrane transport
KYT87_14700	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
KYT87_14705	COG0444	Belongs to the ABC transporter superfamily
KYT87_14720	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
KYT87_14730	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
KYT87_14730	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
KYT87_14740	COG0028	Belongs to the TPP enzyme family
KYT87_14785	COG1335	isochorismatase
KYT87_14795	COG1574	metal-dependent hydrolase with the TIM-barrel fold
KYT87_14825	COG3181	Tripartite tricarboxylate transporter family receptor
KYT87_14830	COG3386	PFAM SMP-30 Gluconolaconase
KYT87_14835	COG2721	sulfolactate sulfo-lyase activity
KYT87_14840	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
KYT87_14860	COG4774	siderophore transport
KYT87_14865	COG2205	protein histidine kinase activity
KYT87_14865	COG0784	Response regulator, receiver
KYT87_14875	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
KYT87_14885	COG3181	Tripartite tricarboxylate transporter family receptor
KYT87_14890	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
KYT87_14900	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
KYT87_14905	COG0436	Aminotransferase
KYT87_14910	COG4597	amino acid ABC transporter
KYT87_14915	COG0765	amino acid transport
KYT87_14920	COG1126	abc transporter atp-binding protein
KYT87_14945	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
KYT87_14955	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
KYT87_14960	COG0390	transport system, permease component
KYT87_14965	COG3842	ATPase activity
KYT87_14970	COG1126	abc transporter atp-binding protein
KYT87_14975	COG0765	amino acid transport
KYT87_14980	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
KYT87_14990	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
KYT87_15055	COG4566	intracellular signal transduction
KYT87_15070	COG3706	GGDEF domain
KYT87_15130	COG0583	DNA-binding transcription factor activity
KYT87_15145	COG1126	abc transporter atp-binding protein
KYT87_15155	COG0765	amino acid transport
KYT87_15180	COG2175	clavaminate synthase activity
KYT87_15190	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
KYT87_15225	COG3181	Tripartite tricarboxylate transporter family receptor
KYT87_15240	COG2985	domain, Protein
KYT87_15255	COG3119	arylsulfatase activity
KYT87_15265	COG2223	nitrite transmembrane transporter activity
KYT87_15285	COG3706	GGDEF domain
KYT87_15315	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
KYT87_15340	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
KYT87_15345	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
KYT87_15350	COG1116	anion transmembrane transporter activity
KYT87_15380	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
KYT87_15385	COG4597	amino acid ABC transporter
KYT87_15390	COG0583	DNA-binding transcription factor activity
KYT87_15405	COG3154	lipid carrier protein
KYT87_15410	COG0826	peptidase U32
KYT87_15415	COG0826	peptidase U32
KYT87_15470	COG2197	response regulator
KYT87_15475	COG3850	Histidine kinase
KYT87_15480	COG1763	Mo-molybdopterin cofactor biosynthetic process
KYT87_15485	COG0288	reversible hydration of carbon dioxide
KYT87_15490	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
KYT87_15495	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
KYT87_15500	COG2181	nitrate reductase activity
KYT87_15505	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
KYT87_15510	COG1140	nitrate reductase beta subunit
KYT87_15515	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
KYT87_15520	COG2223	nitrite transmembrane transporter activity
KYT87_15540	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
KYT87_15550	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
KYT87_15605	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
KYT87_15645	COG1414	Transcriptional regulator
KYT87_15650	COG2070	2-Nitropropane dioxygenase
KYT87_15655	COG5002	protein histidine kinase activity
KYT87_15660	COG0745	RESPONSE REGULATOR receiver
KYT87_15665	COG4117	Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein)
KYT87_15670	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
KYT87_15680	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
KYT87_15685	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
KYT87_15705	COG3181	Tripartite tricarboxylate transporter family receptor
KYT87_15710	COG1028	Short-chain dehydrogenase reductase Sdr
KYT87_15720	COG0583	DNA-binding transcription factor activity
KYT87_15725	COG1028	Short-chain dehydrogenase reductase Sdr
KYT87_15740	COG3181	Tripartite tricarboxylate transporter family receptor
KYT87_15770	COG0583	DNA-binding transcription factor activity
KYT87_15800	COG1262	PFAM Formylglycine-generating sulfatase enzyme
KYT87_15810	COG2015	COG2015, Alkyl sulfatase and related hydrolases
KYT87_15815	COG3706	GGDEF domain
KYT87_15830	COG2814	Major facilitator Superfamily
KYT87_15835	COG4191	Histidine kinase
KYT87_15835	COG0784	Response regulator, receiver
KYT87_15845	COG1804	L-carnitine dehydratase bile acid-inducible protein F
KYT87_15850	COG0183	Belongs to the thiolase family
KYT87_15855	COG1024	Enoyl-CoA hydratase
KYT87_15880	COG0583	DNA-binding transcription factor activity
KYT87_15900	COG2207	Transcriptional regulator
KYT87_15940	COG1733	regulation of RNA biosynthetic process
KYT87_15945	COG2085	NADP oxidoreductase coenzyme F420-dependent
KYT87_15955	COG0673	inositol 2-dehydrogenase activity
KYT87_15970	COG1028	Short-chain dehydrogenase reductase Sdr
KYT87_15985	COG1024	Enoyl-CoA hydratase
KYT87_15995	COG1295	ribonuclease BN
KYT87_16015	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
KYT87_16025	COG1028	Short-chain dehydrogenase reductase Sdr
KYT87_16075	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
KYT87_16080	COG0583	DNA-binding transcription factor activity
KYT87_16090	COG1473	amidohydrolase
KYT87_16095	COG0667	Aldo Keto reductase
KYT87_16130	COG2814	Major facilitator Superfamily
KYT87_16135	COG3967	Belongs to the short-chain dehydrogenases reductases (SDR) family
KYT87_16195	COG1309	transcriptional regulator
KYT87_16215	COG3181	Tripartite tricarboxylate transporter family receptor
KYT87_16220	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
KYT87_16230	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
KYT87_16240	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
KYT87_16250	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
KYT87_16255	COG0657	acetylesterase activity
KYT87_16280	COG3181	Tripartite tricarboxylate transporter family receptor
KYT87_16295	COG0047	phosphoribosylformylglycinamidine synthase activity
KYT87_16295	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
KYT87_16305	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
KYT87_16305	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
KYT87_16310	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
KYT87_16320	COG0613	PHP domain protein
KYT87_16330	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
KYT87_16340	COG0583	DNA-binding transcription factor activity
KYT87_16365	COG2146	nitrite reductase [NAD(P)H] activity
KYT87_16365	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
KYT87_16370	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
KYT87_16370	COG2146	nitrite reductase [NAD(P)H] activity
KYT87_16375	COG2116	formate transmembrane transporter activity
KYT87_16390	COG3707	response regulator
KYT87_16395	COG0477	Major facilitator Superfamily
KYT87_16400	COG1846	Transcriptional regulator
KYT87_16410	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
KYT87_16415	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
KYT87_16425	COG1850	ribulose-bisphosphate carboxylase activity
KYT87_16440	COG1028	Short-chain dehydrogenase reductase Sdr
KYT87_16460	COG1028	Short-chain dehydrogenase reductase Sdr
KYT87_16465	COG3181	Tripartite tricarboxylate transporter family receptor
KYT87_16495	COG0559	Belongs to the binding-protein-dependent transport system permease family
KYT87_16515	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
KYT87_16545	COG0439	Biotin carboxylase
KYT87_16565	COG1012	belongs to the aldehyde dehydrogenase family
KYT87_16570	COG2084	Dehydrogenase
KYT87_16575	COG1414	Transcriptional regulator
KYT87_16580	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
KYT87_16585	COG0737	Belongs to the 5'-nucleotidase family
KYT87_16590	COG2814	Major facilitator Superfamily
KYT87_16595	COG4604	ABC transporter, ATP-binding protein
KYT87_16600	COG4605	iron ion homeostasis
KYT87_16605	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
KYT87_16610	COG4607	ABC-type enterochelin transport system periplasmic component
KYT87_16615	COG4771	TonB-dependent receptor
KYT87_16620	COG0745	RESPONSE REGULATOR receiver
KYT87_16625	COG2205	protein histidine kinase activity
KYT87_16630	COG4771	TonB-dependent receptor
KYT87_16640	COG1136	(ABC) transporter
KYT87_16665	COG1028	Short-chain dehydrogenase reductase Sdr
KYT87_16670	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
KYT87_16680	COG1309	transcriptional regulator
KYT87_16685	COG0183	Belongs to the thiolase family
KYT87_16690	COG1022	Amp-dependent synthetase and ligase
KYT87_16705	COG1172	Belongs to the binding-protein-dependent transport system permease family
KYT87_16720	COG1024	Enoyl-CoA hydratase
KYT87_16735	COG3181	Tripartite tricarboxylate transporter family receptor
KYT87_16740	COG0583	DNA-binding transcription factor activity
KYT87_16745	COG1803	Methylglyoxal synthase
KYT87_16750	COG2975	iron-sulfur cluster assembly
KYT87_16755	COG0633	Ferredoxin
KYT87_16760	COG0443	Heat shock 70 kDa protein
KYT87_16765	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
KYT87_16775	COG0822	iron-sulfur transferase activity
KYT87_16780	COG1104	cysteine desulfurase activity
KYT87_16790	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
KYT87_16795	COG0556	nucleotide-excision repair
KYT87_16805	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
KYT87_16810	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
KYT87_16815	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
KYT87_16820	COG0740	serine-type endopeptidase activity
KYT87_16825	COG0544	peptidyl-prolyl cis-trans isomerase activity
KYT87_16830	COG0501	Belongs to the peptidase M48B family
KYT87_16840	COG1278	Cold shock
KYT87_16850	COG1278	Cold shock
KYT87_16880	COG0583	DNA-binding transcription factor activity
KYT87_16920	COG0456	acetyltransferase
KYT87_16930	COG2877	3-deoxy-8-phosphooctulonate synthase activity
KYT87_16935	COG3038	cytochrome b561
KYT87_16950	COG0277	FAD linked oxidase domain protein
KYT87_16955	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
KYT87_16960	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
KYT87_16965	COG2271	Major facilitator Superfamily
KYT87_16985	COG2171	N-acyltransferase activity
KYT87_16995	COG2890	protein-(glutamine-N5) methyltransferase activity
KYT87_17000	COG0488	(ABC) transporter
KYT87_17010	COG0210	DNA helicase
KYT87_17030	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
KYT87_17030	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
KYT87_17035	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
KYT87_17040	COG0196	riboflavin kinase activity
KYT87_17045	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
KYT87_17050	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
KYT87_17055	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
KYT87_17105	COG1902	pentaerythritol trinitrate reductase activity
KYT87_17110	COG1126	abc transporter atp-binding protein
KYT87_17115	COG0765	amino acid transport
KYT87_17120	COG0765	amino acid transport
KYT87_17125	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
KYT87_17135	COG1764	response to oxidative stress
KYT87_17140	COG1914	H( )-stimulated, divalent metal cation uptake system
KYT87_17155	COG2271	Major facilitator Superfamily
KYT87_17185	COG0506	proline dehydrogenase activity
KYT87_17185	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
KYT87_17185	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
KYT87_17195	COG3008	intermembrane lipid transfer
KYT87_17200	COG2995	paraquat-inducible protein a
KYT87_17210	COG4953	penicillin-binding protein 1C
KYT87_17215	COG2373	Large extracellular alpha-helical protein
KYT87_17220	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
KYT87_17225	COG1278	Cold shock
KYT87_17240	COG0183	Belongs to the thiolase family
KYT87_17245	COG0038	chloride channel
KYT87_17255	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
KYT87_17280	COG1663	tetraacyldisaccharide 4'-kinase activity
KYT87_17285	COG2835	tetraacyldisaccharide 4'-kinase activity
KYT87_17290	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
KYT87_17295	COG0563	adenylate kinase activity
KYT87_17305	COG0728	peptidoglycan biosynthetic process
KYT87_17315	COG0268	Binds directly to 16S ribosomal RNA
KYT87_17320	COG0583	DNA-binding transcription factor activity
KYT87_17335	COG3181	Tripartite tricarboxylate transporter family receptor
KYT87_17340	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
KYT87_17345	COG2186	Transcriptional regulator
KYT87_17355	COG3181	Tripartite tricarboxylate transporter family receptor
KYT87_17365	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
KYT87_17395	COG3384	dioxygenase
KYT87_17400	COG1012	belongs to the aldehyde dehydrogenase family
KYT87_17415	COG3971	2-oxopent-4-enoate hydratase activity
KYT87_17425	COG1028	Short-chain dehydrogenase reductase Sdr
KYT87_17430	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
KYT87_17435	COG1562	ergosterol biosynthetic process
KYT87_17440	COG1562	ergosterol biosynthetic process
KYT87_17450	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
KYT87_17470	COG1477	protein flavinylation
KYT87_17475	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
KYT87_17485	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
KYT87_17500	COG5564	TIM-barrel signal transduction protein
KYT87_17505	COG5441	Belongs to the UPF0261 family
KYT87_17520	COG0542	response to heat
KYT87_17530	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
KYT87_17540	COG0477	Major facilitator Superfamily
KYT87_17570	COG0494	nUDIX hydrolase
KYT87_17575	COG0443	Heat shock 70 kDa protein
KYT87_17615	COG1132	(ABC) transporter
KYT87_17630	COG5265	(ABC) transporter
KYT87_17635	COG1280	lysine exporter protein (LysE YggA)
KYT87_17650	COG4977	sequence-specific DNA binding
KYT87_17675	COG0318	PFAM AMP-dependent synthetase and ligase
KYT87_17680	COG2188	Transcriptional regulator
KYT87_17700	COG2610	gluconate transmembrane transporter activity
KYT87_17705	COG0583	DNA-binding transcription factor activity
KYT87_17715	COG1024	Enoyl-CoA hydratase
KYT87_17720	COG5001	Diguanylate cyclase
KYT87_17725	COG3181	Tripartite tricarboxylate transporter family receptor
KYT87_17730	COG0129	dihydroxy-acid dehydratase activity
KYT87_17820	COG3829	transcription factor binding
KYT87_17845	COG3530	Putative quorum-sensing-regulated virulence factor
KYT87_17855	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
KYT87_17860	COG0318	PFAM AMP-dependent synthetase and ligase
KYT87_17870	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
KYT87_17880	COG1846	Transcriptional regulator
KYT87_17905	COG1522	sequence-specific DNA binding
KYT87_17910	COG0488	(ABC) transporter
KYT87_17940	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
KYT87_17950	COG0456	acetyltransferase
KYT87_17965	COG2951	lytic endotransglycosylase activity
KYT87_17985	COG0583	DNA-binding transcription factor activity
KYT87_18025	COG2272	Belongs to the type-B carboxylesterase lipase family
KYT87_18030	COG3181	Tripartite tricarboxylate transporter family receptor
KYT87_18035	COG1473	amidohydrolase
KYT87_18040	COG1712	Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate
KYT87_18055	COG3618	amidohydrolase
KYT87_18060	COG3181	Tripartite tricarboxylate transporter family receptor
KYT87_18070	COG0023	Translation Initiation Factor
KYT87_18115	COG2814	Major facilitator Superfamily
KYT87_18120	COG2207	Transcriptional regulator
KYT87_18120	COG3708	Transcriptional regulator
KYT87_18130	COG1250	3-hydroxyacyl-CoA dehydrogenase
KYT87_18160	COG2169	Transcriptional regulator
KYT87_18190	COG1272	protein, Hemolysin III
KYT87_18215	COG0842	Transport permease protein
KYT87_18220	COG1131	(ABC) transporter
KYT87_18240	COG3181	Tripartite tricarboxylate transporter family receptor
KYT87_18250	COG2824	Alkylphosphonate utilization operon protein PhnA
KYT87_18265	COG0348	domain, Protein
KYT87_18285	COG3278	Belongs to the heme-copper respiratory oxidase family
KYT87_18305	COG2301	Belongs to the HpcH HpaI aldolase family
KYT87_18310	COG3181	Tripartite tricarboxylate transporter family receptor
KYT87_18315	COG0583	DNA-binding transcription factor activity
KYT87_18320	COG0583	DNA-binding transcription factor activity
KYT87_18325	COG1064	alcohol dehydrogenase
KYT87_18330	COG2224	Isocitrate lyase
KYT87_18335	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
KYT87_18335	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
KYT87_18340	COG1473	amidohydrolase
KYT87_18355	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
KYT87_18370	COG0736	holo-[acyl-carrier-protein] synthase activity
KYT87_18375	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
KYT87_18385	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
KYT87_18390	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
KYT87_18415	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
KYT87_18420	COG4149	molybdate abc transporter
KYT87_18425	COG0725	ABC transporter, periplasmic molybdate-binding protein
KYT87_18430	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
KYT87_18455	COG4262	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
KYT87_18465	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
KYT87_18470	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
KYT87_18475	COG4120	Belongs to the binding-protein-dependent transport system permease family
KYT87_18485	COG0667	Aldo Keto reductase
KYT87_18495	COG0318	PFAM AMP-dependent synthetase and ligase
KYT87_18500	COG1024	Enoyl-CoA hydratase
KYT87_18510	COG1802	Transcriptional regulator
KYT87_18545	COG1024	Enoyl-CoA hydratase
KYT87_18555	COG0183	Belongs to the thiolase family
KYT87_18560	COG1024	Enoyl-CoA hydratase
KYT87_18565	COG1960	acyl-CoA dehydrogenase activity
KYT87_18585	COG0583	DNA-binding transcription factor activity
KYT87_18590	COG0517	IMP dehydrogenase activity
KYT87_18635	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
KYT87_18640	COG3384	dioxygenase
KYT87_18655	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
KYT87_18710	COG4964	Belongs to the GSP D family
KYT87_18755	COG1846	Transcriptional regulator
KYT87_18760	COG4172	Belongs to the ABC transporter superfamily
KYT87_18765	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
KYT87_18770	COG0601	transmembrane transport
KYT87_18785	COG0598	Magnesium transport protein CorA
KYT87_18805	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
KYT87_18820	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
KYT87_18825	COG1045	serine acetyltransferase
KYT87_18830	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
KYT87_18835	COG0166	Belongs to the GPI family
KYT87_18880	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
KYT87_18900	COG0438	transferase activity, transferring glycosyl groups
KYT87_18910	COG0110	maltose O-acetyltransferase activity
KYT87_18915	COG0297	glycogen (starch) synthase activity
KYT87_18920	COG2197	response regulator
KYT87_18925	COG2197	response regulator
KYT87_18935	COG1309	transcriptional regulator
KYT87_18945	COG0183	Belongs to the thiolase family
KYT87_18950	COG1024	Enoyl-CoA hydratase
KYT87_18950	COG1250	3-hydroxyacyl-CoA dehydrogenase
KYT87_18960	COG1024	Enoyl-CoA hydratase
KYT87_18960	COG1250	3-hydroxyacyl-CoA dehydrogenase
KYT87_18965	COG0183	Belongs to the thiolase family
KYT87_18980	COG0318	PFAM AMP-dependent synthetase and ligase
KYT87_18990	COG3181	Tripartite tricarboxylate transporter family receptor
KYT87_19000	COG4774	siderophore transport
KYT87_19010	COG3395	kinase activity
KYT87_19015	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
KYT87_19035	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
KYT87_19040	COG0842	Transport permease protein
KYT87_19040	COG1129	ABC transporter
KYT87_19045	COG0842	Transport permease protein
KYT87_19050	COG0318	PFAM AMP-dependent synthetase and ligase
KYT87_19055	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
KYT87_19060	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
KYT87_19075	COG3181	Tripartite tricarboxylate transporter family receptor
KYT87_19085	COG1414	Transcriptional regulator
KYT87_19095	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
KYT87_19110	COG0583	DNA-binding transcription factor activity
KYT87_19140	COG2603	Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA
KYT87_19150	COG0527	aspartate kinase activity
KYT87_19160	COG0825	malonyl-CoA metabolic process
KYT87_19170	COG0215	cysteine-tRNA ligase activity
KYT87_19185	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
KYT87_19190	COG1968	undecaprenyl-diphosphatase activity
KYT87_19195	COG1253	flavin adenine dinucleotide binding
KYT87_19200	COG0483	inositol monophosphate 1-phosphatase activity
KYT87_19220	COG0668	transmembrane transport
KYT87_19250	COG0235	Class ii aldolase
KYT87_19265	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
KYT87_19270	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
KYT87_19290	COG1802	Transcriptional regulator
KYT87_19315	COG3360	Dodecin
KYT87_19325	COG0583	DNA-binding transcription factor activity
KYT87_19330	COG1028	Short-chain dehydrogenase reductase Sdr
KYT87_19345	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
KYT87_19345	COG0426	domain, Protein
KYT87_19350	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
KYT87_19355	COG0583	DNA-binding transcription factor activity
KYT87_19365	COG1024	Enoyl-CoA hydratase
KYT87_19375	COG1960	acyl-CoA dehydrogenase activity
KYT87_19395	COG1028	Short-chain dehydrogenase reductase Sdr
KYT87_19415	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
KYT87_19420	COG2850	peptidyl-arginine hydroxylation
KYT87_19430	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
KYT87_19435	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
KYT87_19440	COG1994	Peptidase M50
KYT87_19445	COG0009	L-threonylcarbamoyladenylate synthase
KYT87_19450	COG2321	neutral zinc metallopeptidase
KYT87_19510	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
KYT87_19625	COG3756	Protein conserved in bacteria
KYT87_19645	COG1028	Short-chain dehydrogenase reductase Sdr
KYT87_19660	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
KYT87_19670	COG1024	Enoyl-CoA hydratase
KYT87_19700	COG1802	Transcriptional regulator
KYT87_19715	COG2197	response regulator
KYT87_19740	COG3121	Chaperone
KYT87_19745	COG3188	usher protein
KYT87_19760	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
KYT87_19765	COG1529	Aldehyde oxidase and xanthine dehydrogenase
KYT87_19770	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
KYT87_19775	COG2080	2 iron, 2 sulfur cluster binding
KYT87_19800	COG1024	Enoyl-CoA hydratase
KYT87_19830	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
KYT87_19840	COG1414	Transcriptional regulator
KYT87_19845	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
KYT87_19850	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
KYT87_19855	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
KYT87_19860	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
KYT87_19865	COG3485	protocatechuate 3,4-dioxygenase
KYT87_19870	COG3485	protocatechuate 3,4-dioxygenase
KYT87_19910	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
KYT87_19915	COG0765	amino acid transport
KYT87_19935	COG1012	belongs to the aldehyde dehydrogenase family
KYT87_19945	COG2423	ornithine cyclodeaminase activity
KYT87_19960	COG2197	response regulator
KYT87_19965	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
KYT87_19970	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
KYT87_19975	COG1116	anion transmembrane transporter activity
KYT87_19980	COG1513	Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide
KYT87_20000	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
KYT87_20030	COG0811	peptide transport
KYT87_20070	COG1396	sequence-specific DNA binding
KYT87_20080	COG3181	Tripartite tricarboxylate transporter family receptor
KYT87_20095	COG3181	Tripartite tricarboxylate transporter family receptor
KYT87_20100	COG1804	L-carnitine dehydratase bile acid-inducible protein F
KYT87_20105	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
KYT87_20120	COG0183	Belongs to the thiolase family
KYT87_20125	COG1250	3-hydroxyacyl-CoA dehydrogenase
KYT87_20125	COG1024	Enoyl-CoA hydratase
KYT87_20135	COG1733	regulation of RNA biosynthetic process
KYT87_20140	COG0604	alcohol dehydrogenase
KYT87_20155	COG3300	MHYT domain
KYT87_20155	COG5001	Diguanylate cyclase
KYT87_20160	COG0583	DNA-binding transcription factor activity
KYT87_20165	COG1335	isochorismatase
KYT87_20205	COG0583	DNA-binding transcription factor activity
KYT87_20215	COG2084	Dehydrogenase
KYT87_20220	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
KYT87_20225	COG0683	leucine binding
KYT87_20255	COG0596	Alpha beta hydrolase
KYT87_20255	COG2945	thiolester hydrolase activity
KYT87_20270	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
KYT87_20285	COG2197	response regulator
KYT87_20290	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
KYT87_20315	COG1595	DNA-templated transcription, initiation
KYT87_20325	COG0583	DNA-binding transcription factor activity
KYT87_20400	COG2192	nodulation
KYT87_20410	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
KYT87_20415	COG1028	Short-chain dehydrogenase reductase Sdr
KYT87_20420	COG0297	glycogen (starch) synthase activity
KYT87_20425	COG5265	(ABC) transporter
KYT87_20435	COG1215	transferase activity, transferring glycosyl groups
KYT87_20470	COG3546	catalase activity
KYT87_20475	COG1132	(ABC) transporter
KYT87_20550	COG1546	Belongs to the CinA family
KYT87_20550	COG1058	Belongs to the CinA family
KYT87_20560	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
KYT87_20565	COG3485	protocatechuate 3,4-dioxygenase
KYT87_20570	COG3485	protocatechuate 3,4-dioxygenase
KYT87_20580	COG2271	Major facilitator Superfamily
KYT87_20590	COG1012	belongs to the aldehyde dehydrogenase family
KYT87_20605	COG0318	PFAM AMP-dependent synthetase and ligase
KYT87_20610	COG1960	acyl-CoA dehydrogenase activity
KYT87_20615	COG1028	Short-chain dehydrogenase reductase Sdr
KYT87_20650	COG4176	ABC-type proline glycine betaine transport system permease component
KYT87_20660	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
KYT87_20665	COG2814	Major facilitator Superfamily
KYT87_20670	COG0227	Belongs to the bacterial ribosomal protein bL28 family
KYT87_20675	COG0267	Belongs to the bacterial ribosomal protein bL33 family
KYT87_20710	COG1686	Belongs to the peptidase S11 family
KYT87_20720	COG1846	Transcriptional regulator
KYT87_20725	COG2814	Major facilitator Superfamily
KYT87_20730	COG0495	leucyl-tRNA aminoacylation
KYT87_20745	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
KYT87_20760	COG0154	amidase activity
KYT87_20775	COG1250	3-hydroxyacyl-CoA dehydrogenase
KYT87_20790	COG0583	DNA-binding transcription factor activity
KYT87_20800	COG0235	Class ii aldolase
KYT87_20830	COG0583	DNA-binding transcription factor activity
KYT87_20835	COG0427	acetyl-CoA hydrolase
KYT87_20840	COG0583	DNA-binding transcription factor activity
KYT87_20845	COG3264	Mechanosensitive ion channel
KYT87_20845	COG1511	domain protein
KYT87_20905	COG3842	ATPase activity
KYT87_20915	COG1177	transmembrane transport
KYT87_20920	COG3938	Belongs to the proline racemase family
KYT87_20925	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
KYT87_20930	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
KYT87_20935	COG3958	Transketolase
KYT87_20940	COG3959	Transketolase, thiamine diphosphate binding domain
KYT87_20945	COG1802	Transcriptional regulator
KYT87_20950	COG0371	Dehydrogenase
KYT87_20955	COG3246	L-lysine catabolic process to acetate
KYT87_20960	COG1250	3-hydroxyacyl-CoA dehydrogenase
KYT87_20965	COG1028	Short-chain dehydrogenase reductase Sdr
KYT87_20975	COG0559	Belongs to the binding-protein-dependent transport system permease family
KYT87_20990	COG3321	synthase
KYT87_20990	COG1028	Short-chain dehydrogenase reductase Sdr
KYT87_20990	COG0604	alcohol dehydrogenase
KYT87_20995	COG1028	Short-chain dehydrogenase reductase Sdr
KYT87_21000	COG0500	methyltransferase
KYT87_21015	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
KYT87_21040	COG0667	Aldo Keto reductase
KYT87_21045	COG2207	Transcriptional regulator
KYT87_21050	COG0583	DNA-binding transcription factor activity
KYT87_21055	COG1335	isochorismatase
KYT87_21090	COG1804	L-carnitine dehydratase bile acid-inducible protein F
KYT87_21095	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
KYT87_21100	COG0583	DNA-binding transcription factor activity
KYT87_21125	COG3685	Protein conserved in bacteria
KYT87_21135	COG1090	epimerase
KYT87_21150	COG0582	viral genome integration into host DNA
KYT87_21280	COG0740	serine-type endopeptidase activity
KYT87_21285	COG4695	Portal protein
KYT87_21310	COG1598	PFAM Uncharacterised protein family UPF0150
KYT87_21315	COG2197	response regulator
KYT87_21410	COG0202	RNA polymerase activity
KYT87_21435	COG2003	Belongs to the UPF0758 family
KYT87_21455	COG2433	Pfam Transposase IS66
KYT87_21485	COG0583	DNA-binding transcription factor activity
KYT87_21495	COG2084	Dehydrogenase
KYT87_21525	COG1028	Short-chain dehydrogenase reductase Sdr
KYT87_21535	COG1902	pentaerythritol trinitrate reductase activity
KYT87_21555	COG1024	Enoyl-CoA hydratase
KYT87_21560	COG3181	Tripartite tricarboxylate transporter family receptor
KYT87_21570	COG1804	L-carnitine dehydratase bile acid-inducible protein F
KYT87_21580	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
KYT87_21620	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
KYT87_21635	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
KYT87_21645	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
KYT87_21650	COG0581	inorganic phosphate transmembrane transporter activity
KYT87_21655	COG0573	inorganic phosphate transmembrane transporter activity
KYT87_21660	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
KYT87_21690	COG0431	NADPH-dependent FMN reductase
KYT87_21715	COG4191	Histidine kinase
KYT87_21735	COG4654	Cytochrome c, class I
KYT87_21740	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
KYT87_21760	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
KYT87_21860	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
KYT87_22030	COG0210	DNA helicase
KYT87_22120	COG2885	chlorophyll binding
KYT87_22150	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
KYT87_22160	COG0305	Participates in initiation and elongation during chromosome replication
KYT87_22190	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
KYT87_22225	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
KYT87_22235	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
KYT87_22240	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
KYT87_22245	COG1534	Rna-binding protein
KYT87_22250	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
KYT87_22255	COG2233	PERMEase
KYT87_22275	COG3842	ATPase activity
KYT87_22285	COG0406	alpha-ribazole phosphatase activity
KYT87_22295	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
KYT87_22300	COG0505	Belongs to the CarA family
KYT87_22305	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
KYT87_22320	COG0745	RESPONSE REGULATOR receiver
KYT87_22335	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
KYT87_22345	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
KYT87_22350	COG1804	L-carnitine dehydratase bile acid-inducible protein F
KYT87_22365	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
KYT87_22375	COG1074	ATP-dependent DNA helicase activity
KYT87_22400	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
KYT87_22415	COG2205	protein histidine kinase activity
KYT87_22425	COG1686	Belongs to the peptidase S11 family
KYT87_22440	COG0311	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
KYT87_22445	COG1028	Short-chain dehydrogenase reductase Sdr
KYT87_22460	COG0583	DNA-binding transcription factor activity
KYT87_22465	COG3321	synthase
KYT87_22465	COG0604	alcohol dehydrogenase
KYT87_22475	COG4974	Belongs to the 'phage' integrase family
KYT87_22480	COG0583	DNA-binding transcription factor activity
KYT87_22485	COG0028	Belongs to the TPP enzyme family
KYT87_22490	COG1960	acyl-CoA dehydrogenase activity
KYT87_22515	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
KYT87_22560	COG0028	Belongs to the TPP enzyme family
KYT87_22565	COG1126	abc transporter atp-binding protein
KYT87_22570	COG0765	amino acid transport
KYT87_22575	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
KYT87_22580	COG0010	Belongs to the arginase family
KYT87_22585	COG1414	Transcriptional regulator
KYT87_22590	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
KYT87_22605	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
KYT87_22610	COG1414	Transcriptional regulator
KYT87_22615	COG0009	L-threonylcarbamoyladenylate synthase
KYT87_22620	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
KYT87_22625	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
KYT87_22630	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
KYT87_22640	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
KYT87_22660	COG1301	dicarboxylic acid transport
KYT87_22680	COG3454	Phosphonate metabolism
KYT87_22685	COG4778	phosphonate C-P lyase system protein PhnL
KYT87_22690	COG4107	phosphonate C-P lyase system protein PhnK
KYT87_22695	COG3627	carbon phosphorus lyase activity
KYT87_22700	COG3626	phosphonate metabolism
KYT87_22705	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
KYT87_22710	COG3624	Phosphonate C-P lyase system protein PhnG
KYT87_22715	COG2188	Transcriptional regulator
KYT87_22720	COG3454	Phosphonate metabolism
KYT87_22725	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
KYT87_22730	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
KYT87_22735	COG0583	DNA-binding transcription factor activity
KYT87_22740	COG0405	Gamma-glutamyltransferase
KYT87_22755	COG3639	organic phosphonate transmembrane transporter activity
KYT87_22760	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
KYT87_22765	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
KYT87_22775	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
KYT87_22785	COG0739	heme binding
KYT87_22795	COG0521	Mo-molybdopterin cofactor biosynthetic process
KYT87_22805	COG0306	phosphate transporter
KYT87_22835	COG0625	glutathione transferase activity
KYT87_22850	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
KYT87_22855	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
KYT87_22870	COG0126	phosphoglycerate kinase activity
KYT87_22875	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
KYT87_22880	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
KYT87_22885	COG1385	rRNA (uridine-N3-)-methyltransferase activity
KYT87_22890	COG2732	(Barnase) inhibitor
KYT87_22900	COG0280	phosphate acetyltransferase
KYT87_22900	COG0281	malic enzyme
KYT87_22910	COG0436	Aminotransferase
KYT87_22915	COG0741	lytic transglycosylase activity
KYT87_22920	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
KYT87_22935	COG4575	ribosome binding
KYT87_22945	COG1648	precorrin-2 dehydrogenase activity
KYT87_22945	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
KYT87_22950	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
KYT87_22955	COG2027	D-alanyl-D-alanine carboxypeptidase
KYT87_22960	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
KYT87_22965	COG0343	queuine tRNA-ribosyltransferase activity
KYT87_22970	COG1862	Preprotein translocase
KYT87_22975	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
KYT87_22980	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
KYT87_22990	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
KYT87_23000	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
KYT87_23005	COG1702	phosphate starvation-inducible protein PhoH
KYT87_23010	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
KYT87_23015	COG4535	Mg2 and Co2 transporter CorC
KYT87_23020	COG0815	Transfers the fatty acyl group on membrane lipoproteins
KYT87_23025	COG0667	Aldo Keto reductase
KYT87_23070	COG0697	spore germination
KYT87_23080	COG0678	peroxiredoxin activity
KYT87_23080	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
KYT87_23090	COG0412	Dienelactone hydrolase
KYT87_23100	COG0315	cyclic pyranopterin monophosphate synthase activity
KYT87_23110	COG0314	molybdopterin synthase activity
KYT87_23115	COG0521	Mo-molybdopterin cofactor biosynthetic process
KYT87_23120	COG0303	'Molybdopterin
KYT87_23130	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
KYT87_23150	COG3383	formate dehydrogenase (NAD+) activity
KYT87_23155	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
KYT87_23165	COG2223	nitrite transmembrane transporter activity
KYT87_23220	COG1028	Short-chain dehydrogenase reductase Sdr
KYT87_23240	COG2828	Protein conserved in bacteria
KYT87_23245	COG0583	DNA-binding transcription factor activity
KYT87_23250	COG0456	acetyltransferase
KYT87_23290	COG0559	Belongs to the binding-protein-dependent transport system permease family
KYT87_23325	COG0671	phosphoesterase, PA-phosphatase related
KYT87_23345	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
KYT87_23350	COG0583	DNA-binding transcription factor activity
KYT87_23355	COG1666	GTP binding
KYT87_23360	COG1120	ATPase activity
KYT87_23365	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
KYT87_23370	COG4558	Periplasmic binding protein
KYT87_23375	COG3720	iron ion transport
KYT87_23385	COG3712	iron ion homeostasis
KYT87_23390	COG1595	DNA-templated transcription, initiation
KYT87_23405	COG2378	regulation of single-species biofilm formation
KYT87_23415	COG1113	amino acid transport
KYT87_23425	COG1522	sequence-specific DNA binding
KYT87_23430	COG1272	protein, Hemolysin III
KYT87_23435	COG3191	aminopeptidase activity
KYT87_23440	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
KYT87_23445	COG0765	amino acid transport
KYT87_23450	COG1126	abc transporter atp-binding protein
KYT87_23465	COG1999	signal sequence binding
KYT87_23480	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
KYT87_23490	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
KYT87_23495	COG1845	cytochrome c oxidase, subunit III
KYT87_23500	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
KYT87_23515	COG4772	TonB-dependent receptor
KYT87_23520	COG2900	Belongs to the SlyX family
KYT87_23525	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
KYT87_23550	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
KYT87_23555	COG0477	Major facilitator Superfamily
KYT87_23560	COG0583	DNA-binding transcription factor activity
KYT87_23565	COG0281	malic enzyme
KYT87_23565	COG0280	phosphate acetyltransferase
KYT87_23590	COG0697	spore germination
KYT87_23605	COG0583	DNA-binding transcription factor activity
KYT87_23615	COG4221	oxidoreductase activity
KYT87_23630	COG1396	sequence-specific DNA binding
KYT87_23635	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
KYT87_23650	COG1262	PFAM Formylglycine-generating sulfatase enzyme
KYT87_23665	COG1028	Short-chain dehydrogenase reductase Sdr
KYT87_23670	COG1285	pathogenesis
KYT87_23675	COG1028	Short-chain dehydrogenase reductase Sdr
KYT87_23680	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
KYT87_23695	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
KYT87_23705	COG2706	6-phosphogluconolactonase activity
KYT87_23715	COG3712	iron ion homeostasis
KYT87_23720	COG1595	DNA-templated transcription, initiation
KYT87_23725	COG0784	Response regulator, receiver
KYT87_23725	COG4191	Histidine kinase
KYT87_23735	COG3712	iron ion homeostasis
KYT87_23740	COG1595	DNA-templated transcription, initiation
KYT87_23745	COG4773	Receptor
KYT87_23765	COG0330	HflC and HflK could
KYT87_23785	COG2807	transmembrane transport
KYT87_23790	COG2207	Transcriptional regulator
KYT87_23795	COG4106	trans-aconitate 2-methyltransferase activity
KYT87_23800	COG0861	Integral membrane protein TerC family
KYT87_23805	COG0583	DNA-binding transcription factor activity
KYT87_23840	COG0477	Major facilitator Superfamily
KYT87_23845	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
KYT87_23850	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
KYT87_23855	COG1845	cytochrome c oxidase, subunit III
KYT87_23860	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
KYT87_23865	COG3346	SURF1 family
KYT87_23885	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
KYT87_23915	COG4943	cyclic-guanylate-specific phosphodiesterase activity
KYT87_23920	COG2205	protein histidine kinase activity
KYT87_23920	COG0784	Response regulator, receiver
KYT87_23925	COG2197	response regulator
KYT87_23950	COG0519	Catalyzes the synthesis of GMP from XMP
KYT87_23970	COG0667	Aldo Keto reductase
KYT87_23995	COG0840	transmembrane signaling receptor activity
KYT87_24005	COG2197	response regulator
KYT87_24025	COG2837	iron assimilation
KYT87_24040	COG0642	Histidine kinase
KYT87_24045	COG2819	hydrolase of the alpha beta superfamily
KYT87_24050	COG1802	Transcriptional regulator
KYT87_24060	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
KYT87_24080	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
KYT87_24100	COG2353	YceI-like domain
KYT87_24135	COG3119	arylsulfatase activity
KYT87_24140	COG2207	Transcriptional regulator
KYT87_24145	COG4221	oxidoreductase activity
KYT87_24165	COG0745	RESPONSE REGULATOR receiver
KYT87_24180	COG3387	PFAM Glycoside hydrolase 15-related
KYT87_24200	COG3685	Protein conserved in bacteria
KYT87_24235	COG0583	DNA-binding transcription factor activity
KYT87_24255	COG3135	benzoate transporter
KYT87_24270	COG3712	iron ion homeostasis
KYT87_24275	COG1595	DNA-templated transcription, initiation
KYT87_24315	COG0642	Histidine kinase
KYT87_24340	COG4191	Histidine kinase
KYT87_24345	COG2204	response regulator
KYT87_24350	COG0668	transmembrane transport
KYT87_24355	COG0456	acetyltransferase
KYT87_24380	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
KYT87_24385	COG4566	intracellular signal transduction
KYT87_24390	COG4566	intracellular signal transduction
KYT87_24395	COG4566	intracellular signal transduction
KYT87_24400	COG4191	Histidine kinase
KYT87_24405	COG0387	Pfam Sodium calcium exchanger
KYT87_24445	COG0154	amidase activity
KYT87_24450	COG4608	Belongs to the ABC transporter superfamily
KYT87_24455	COG0444	Belongs to the ABC transporter superfamily
KYT87_24460	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
KYT87_24465	COG0601	transmembrane transport
KYT87_24470	COG0747	negative chemotaxis
KYT87_24480	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
KYT87_24500	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
KYT87_24505	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
KYT87_24520	COG3048	D-serine ammonia-lyase activity
KYT87_24525	COG3181	Tripartite tricarboxylate transporter family receptor
KYT87_24530	COG0154	amidase activity
KYT87_24535	COG2198	Histidine kinase
KYT87_24535	COG2205	protein histidine kinase activity
KYT87_24535	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
KYT87_24535	COG0784	Response regulator, receiver
KYT87_24540	COG0745	RESPONSE REGULATOR receiver
KYT87_24540	COG2205	protein histidine kinase activity
KYT87_24540	COG3292	Two component regulator propeller
KYT87_24570	COG0477	Major facilitator Superfamily
KYT87_24575	COG0625	glutathione transferase activity
KYT87_24595	COG2205	protein histidine kinase activity
KYT87_24600	COG0745	RESPONSE REGULATOR receiver
KYT87_24605	COG2226	methyltransferase
KYT87_24610	COG3181	Tripartite tricarboxylate transporter family receptor
KYT87_24660	COG0251	oxidation-reduction process
KYT87_24665	COG2207	Transcriptional regulator
KYT87_24665	COG4753	response regulator
KYT87_24690	COG1804	L-carnitine dehydratase bile acid-inducible protein F
KYT87_24695	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
KYT87_24700	COG3181	Tripartite tricarboxylate transporter family receptor
KYT87_24705	COG4585	Histidine kinase
KYT87_24740	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
KYT87_24745	COG0463	Glycosyl transferase, family 2
KYT87_24815	COG3181	Tripartite tricarboxylate transporter family receptor
KYT87_24820	COG1609	Transcriptional regulator
KYT87_24825	COG1609	Transcriptional regulator
KYT87_24830	COG2271	Major facilitator Superfamily
KYT87_24845	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
KYT87_24850	COG0459	protein refolding
KYT87_24865	COG1917	Cupin 2, conserved barrel domain protein
KYT87_24880	COG0559	Belongs to the binding-protein-dependent transport system permease family
KYT87_24890	COG1137	ATPase activity
KYT87_24895	COG0410	ABC transporter
KYT87_24905	COG0246	Mannitol dehydrogenase
KYT87_24910	COG2721	sulfolactate sulfo-lyase activity
KYT87_24920	COG1028	Short-chain dehydrogenase reductase Sdr
KYT87_24925	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
KYT87_24935	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
KYT87_24945	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
KYT87_24950	COG1252	NADH dehydrogenase
KYT87_24955	COG0284	orotidine-5'-phosphate decarboxylase activity
KYT87_24960	COG1546	Belongs to the CinA family
KYT87_24975	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
KYT87_24980	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
KYT87_25005	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
KYT87_25010	COG3639	organic phosphonate transmembrane transporter activity
KYT87_25015	COG3639	organic phosphonate transmembrane transporter activity
KYT87_25040	COG0742	ribosomal rna small subunit methyltransferase
KYT87_25045	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
KYT87_25050	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
KYT87_25055	COG3135	benzoate transporter
KYT87_25070	COG2814	Major facilitator Superfamily
KYT87_25085	COG0012	GTP binding
KYT87_25095	COG0193	aminoacyl-tRNA hydrolase activity
KYT87_25115	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
KYT87_25120	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
KYT87_25125	COG1012	belongs to the aldehyde dehydrogenase family
KYT87_25130	COG1309	transcriptional regulator
KYT87_25135	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
KYT87_25150	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
KYT87_25160	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
KYT87_25175	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
KYT87_25185	COG1368	sulfuric ester hydrolase activity
KYT87_25190	COG2186	Transcriptional regulator
KYT87_25195	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
KYT87_25205	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
KYT87_25215	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
KYT87_25215	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
KYT87_25225	COG0642	Histidine kinase
KYT87_25230	COG0745	RESPONSE REGULATOR receiver
KYT87_25235	COG0277	FAD linked oxidase domain protein
KYT87_25250	COG0166	Belongs to the GPI family
KYT87_25255	COG0438	transferase activity, transferring glycosyl groups
KYT87_25260	COG0438	transferase activity, transferring glycosyl groups
KYT87_25265	COG0438	transferase activity, transferring glycosyl groups
KYT87_25290	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
KYT87_25295	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
KYT87_25300	COG2941	Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol
KYT87_25305	COG1765	OsmC-like protein
KYT87_25325	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
KYT87_25330	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
KYT87_25350	COG0601	transmembrane transport
KYT87_25355	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
KYT87_25365	COG0154	amidase activity
KYT87_25380	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
KYT87_25380	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
KYT87_25385	COG0509	glycine decarboxylation via glycine cleavage system
KYT87_25390	COG0404	The glycine cleavage system catalyzes the degradation of glycine
KYT87_25405	COG2081	HI0933 family
KYT87_25420	COG1247	-acetyltransferase
KYT87_25425	COG2203	Gaf domain
KYT87_25425	COG3706	GGDEF domain
KYT87_25425	COG4251	negative regulation of phosphorylation
KYT87_25425	COG5001	Diguanylate cyclase
KYT87_25435	COG0717	Belongs to the dCTP deaminase family
KYT87_25450	COG0489	protein tyrosine kinase activity
KYT87_25460	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
KYT87_25460	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
KYT87_25465	COG1054	Belongs to the UPF0176 family
KYT87_25480	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
KYT87_25490	COG0745	RESPONSE REGULATOR receiver
KYT87_25495	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
KYT87_25510	COG1028	Short-chain dehydrogenase reductase Sdr
KYT87_25545	COG1271	oxidase subunit
KYT87_25550	COG1294	oxidase, subunit
KYT87_25560	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
KYT87_25580	COG1053	succinate dehydrogenase
KYT87_25580	COG0431	NADPH-dependent FMN reductase
KYT87_25580	COG3976	FMN-binding domain protein
KYT87_25590	COG0625	glutathione transferase activity
KYT87_25620	COG1024	Enoyl-CoA hydratase
KYT87_25625	COG1804	L-carnitine dehydratase bile acid-inducible protein F
KYT87_25630	COG1960	acyl-CoA dehydrogenase activity
KYT87_25635	COG3181	Tripartite tricarboxylate transporter family receptor
KYT87_25640	COG0583	DNA-binding transcription factor activity
KYT87_25645	COG3618	amidohydrolase
KYT87_25660	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
KYT87_25725	COG3842	ATPase activity
KYT87_25760	COG1131	(ABC) transporter
KYT87_25765	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
KYT87_25770	COG0583	DNA-binding transcription factor activity
KYT87_25780	COG2267	carboxylic ester hydrolase activity
KYT87_25785	COG3181	Tripartite tricarboxylate transporter family receptor
KYT87_25800	COG3179	chitinase
KYT87_25810	COG3284	Transcriptional regulator
KYT87_25830	COG2828	Protein conserved in bacteria
KYT87_25855	COG1804	L-carnitine dehydratase bile acid-inducible protein F
KYT87_25865	COG1012	belongs to the aldehyde dehydrogenase family
KYT87_25885	COG3152	Membrane
KYT87_25890	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
KYT87_25895	COG2814	Major facilitator Superfamily
KYT87_25905	COG0165	Argininosuccinate lyase
KYT87_25915	COG0583	DNA-binding transcription factor activity
KYT87_25935	COG1176	ABC-type spermidine putrescine transport system, permease component I
KYT87_25940	COG1177	transmembrane transport
KYT87_25945	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
KYT87_25960	COG1028	Short-chain dehydrogenase reductase Sdr
KYT87_25960	COG0604	alcohol dehydrogenase
KYT87_25960	COG3321	synthase
KYT87_25965	COG3842	ATPase activity
KYT87_25970	COG2072	flavoprotein involved in K transport
KYT87_25975	COG3246	L-lysine catabolic process to acetate
KYT87_26005	COG0220	tRNA (guanine-N7-)-methyltransferase activity
KYT87_26020	COG1652	LysM domain
KYT87_26025	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
KYT87_26030	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
KYT87_26045	COG0625	glutathione transferase activity
KYT87_26050	COG1414	Transcriptional regulator
KYT87_26055	COG3734	2-keto-3-deoxy-galactonokinase
KYT87_26060	COG0800	Aldolase
KYT87_26065	COG4948	Mandelate Racemase Muconate Lactonizing
KYT87_26070	COG2271	Major facilitator Superfamily
KYT87_26075	COG2814	Major facilitator Superfamily
KYT87_26095	COG3181	Tripartite tricarboxylate transporter family receptor
KYT87_26105	COG0604	alcohol dehydrogenase
KYT87_26115	COG0326	Molecular chaperone. Has ATPase activity
KYT87_26120	COG2233	PERMEase
KYT87_26150	COG1401	restriction endodeoxyribonuclease activity
KYT87_26180	COG0582	viral genome integration into host DNA
KYT87_26200	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
KYT87_26235	COG1074	ATP-dependent DNA helicase activity
KYT87_26250	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
KYT87_26305	COG1846	Transcriptional regulator
KYT87_26310	COG0477	Major facilitator Superfamily
KYT87_26335	COG3473	Maleate cis-trans isomerase
KYT87_26340	COG0596	Alpha beta hydrolase
KYT87_26345	COG2309	aminopeptidase activity
KYT87_26350	COG1335	isochorismatase
KYT87_26355	COG1529	Aldehyde oxidase and xanthine dehydrogenase
KYT87_26355	COG2010	Cytochrome c
KYT87_26360	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
KYT87_26370	COG0477	Major facilitator Superfamily
KYT87_26380	COG0583	DNA-binding transcription factor activity
KYT87_26390	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
KYT87_26395	COG0210	DNA helicase
KYT87_26415	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
KYT87_26430	COG1172	Belongs to the binding-protein-dependent transport system permease family
KYT87_26435	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
KYT87_26495	COG0583	DNA-binding transcription factor activity
KYT87_26505	COG1695	Transcriptional regulator
KYT87_26515	COG0477	Major facilitator Superfamily
KYT87_26525	COG0277	FAD linked oxidase domain protein
KYT87_26535	COG3842	ATPase activity
KYT87_26540	COG1176	ABC-type spermidine putrescine transport system, permease component I
KYT87_26545	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
KYT87_26560	COG0628	permease
KYT87_26565	COG0583	DNA-binding transcription factor activity
KYT87_26570	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
KYT87_26610	COG0077	Prephenate dehydratase
KYT87_26610	COG1605	Chorismate mutase
KYT87_26620	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
KYT87_26625	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
KYT87_26705	COG1126	abc transporter atp-binding protein
KYT87_26710	COG0765	amino acid transport
KYT87_26715	COG4597	amino acid ABC transporter
KYT87_26720	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
KYT87_26725	COG2884	Cell division ATP-binding protein ftsE
KYT87_26730	COG2177	Part of the ABC transporter FtsEX involved in
KYT87_26745	COG4502	5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)
KYT87_26755	COG2186	Transcriptional regulator
KYT87_26785	COG0410	ABC transporter
KYT87_26790	COG1028	Short-chain dehydrogenase reductase Sdr
KYT87_26795	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
KYT87_26805	COG0508	dehydrogenase complex catalyzes the overall conversion of
KYT87_26810	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
KYT87_26815	COG0583	DNA-binding transcription factor activity
KYT87_26820	COG0129	dihydroxy-acid dehydratase activity
KYT87_26840	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
KYT87_26845	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
KYT87_26850	COG1250	3-hydroxyacyl-CoA dehydrogenase
KYT87_26855	COG2031	fatty acid transporter
KYT87_26860	COG1028	Short-chain dehydrogenase reductase Sdr
KYT87_26865	COG1414	Transcriptional regulator
KYT87_26875	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
KYT87_26880	COG4829	muconolactone delta-isomerase
KYT87_26890	COG0596	Alpha beta hydrolase
KYT87_26910	COG0288	reversible hydration of carbon dioxide
KYT87_26915	COG0625	glutathione transferase activity
KYT87_26930	COG0583	DNA-binding transcription factor activity
KYT87_26960	COG0318	PFAM AMP-dependent synthetase and ligase
KYT87_26975	COG1464	Belongs to the NlpA lipoprotein family
KYT87_26990	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
KYT87_26995	COG2890	protein-(glutamine-N5) methyltransferase activity
KYT87_27000	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
KYT87_27040	COG1116	anion transmembrane transporter activity
KYT87_27045	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
KYT87_27055	COG1028	Short-chain dehydrogenase reductase Sdr
KYT87_27060	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
KYT87_27060	COG3264	Mechanosensitive ion channel
KYT87_27065	COG1473	amidohydrolase
KYT87_27070	COG0583	DNA-binding transcription factor activity
KYT87_27080	COG1522	sequence-specific DNA binding
KYT87_27090	COG5006	permease, DMT superfamily
KYT87_27100	COG3622	Belongs to the hyi family
KYT87_27135	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
KYT87_27145	COG3842	ATPase activity
KYT87_27150	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
KYT87_27170	COG2186	Transcriptional regulator
KYT87_27180	COG3395	kinase activity
KYT87_27185	COG2084	Dehydrogenase
KYT87_27190	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
KYT87_27195	COG3622	Belongs to the hyi family
KYT87_27200	COG2271	Major facilitator Superfamily
KYT87_27205	COG0235	Class ii aldolase
KYT87_27210	COG2814	Major facilitator Superfamily
KYT87_27270	COG0183	Belongs to the thiolase family
KYT87_27275	COG1012	belongs to the aldehyde dehydrogenase family
KYT87_27285	COG1028	Short-chain dehydrogenase reductase Sdr
KYT87_27295	COG1309	transcriptional regulator
KYT87_27300	COG0318	PFAM AMP-dependent synthetase and ligase
KYT87_27305	COG1250	3-hydroxyacyl-CoA dehydrogenase
KYT87_27305	COG1024	Enoyl-CoA hydratase
KYT87_27325	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
KYT87_27385	COG3451	type IV secretory pathway VirB4
KYT87_27425	COG2948	multi-organism process
KYT87_27450	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
KYT87_27490	COG3133	Outer membrane lipoprotein
KYT87_27540	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
KYT87_27545	COG0463	Glycosyl transferase, family 2
KYT87_27580	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
KYT87_27615	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
KYT87_27635	COG4974	Belongs to the 'phage' integrase family
KYT87_27705	COG0489	protein tyrosine kinase activity
KYT87_27715	COG0142	geranyltranstransferase activity
KYT87_27725	COG1414	Transcriptional regulator
KYT87_27730	COG0261	This protein binds to 23S rRNA in the presence of protein L20
KYT87_27735	COG0211	Belongs to the bacterial ribosomal protein bL27 family
KYT87_27740	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
KYT87_27745	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
KYT87_27760	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
KYT87_27775	COG2186	Transcriptional regulator
KYT87_27780	COG5001	Diguanylate cyclase
KYT87_27790	COG0793	Belongs to the peptidase S41A family
KYT87_27795	COG4942	peptidase
KYT87_27800	COG0588	phosphoglycerate mutase activity
KYT87_27805	COG1054	Belongs to the UPF0176 family
KYT87_27810	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
KYT87_27815	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
KYT87_27820	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
KYT87_27825	COG3181	Tripartite tricarboxylate transporter family receptor
KYT87_27830	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
KYT87_27835	COG1040	competence protein
KYT87_27840	COG2226	methyltransferase
KYT87_27845	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
KYT87_27850	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
KYT87_27855	COG0569	domain protein
KYT87_27860	COG2204	response regulator
KYT87_27865	COG5000	phosphorelay sensor kinase activity
KYT87_27875	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
KYT87_27875	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
KYT87_27910	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
KYT87_27930	COG0546	phosphoglycolate phosphatase activity
KYT87_27945	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
KYT87_27950	COG0242	peptide deformylase activity
KYT87_27955	COG0758	DNA mediated transformation
KYT87_27970	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
KYT87_27975	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
KYT87_27980	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
KYT87_27985	COG3181	Tripartite tricarboxylate transporter family receptor
KYT87_27995	COG1238	metal cluster binding
KYT87_28000	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
KYT87_28005	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
KYT87_28020	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
KYT87_28025	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
KYT87_28030	COG4988	ABC transporter
KYT87_28040	COG1294	oxidase, subunit
KYT87_28045	COG1271	oxidase subunit
KYT87_28055	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
KYT87_28065	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
KYT87_28080	COG1137	ATPase activity
KYT87_28085	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
KYT87_28095	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
KYT87_28100	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
KYT87_28115	COG1660	Displays ATPase and GTPase activities
KYT87_28125	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
KYT87_28135	COG0792	nuclease activity
KYT87_28140	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
KYT87_28145	COG2823	Periplasmic or secreted lipoprotein
KYT87_28150	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
KYT87_28155	COG1464	Belongs to the NlpA lipoprotein family
KYT87_28160	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
KYT87_28170	COG1309	transcriptional regulator
KYT87_28175	COG0471	metal ion transport
KYT87_28180	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
KYT87_28185	COG0772	Belongs to the SEDS family
KYT87_28190	COG0768	penicillin binding
KYT87_28200	COG1792	Involved in formation and maintenance of cell shape
KYT87_28205	COG1077	Cell shape determining protein MreB Mrl
KYT87_28210	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
KYT87_28215	COG0154	amidase activity
KYT87_28220	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
KYT87_28225	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
KYT87_28230	COG0708	Exodeoxyribonuclease III
KYT87_28235	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
KYT87_28245	COG0583	DNA-binding transcription factor activity
KYT87_28255	COG0583	DNA-binding transcription factor activity
KYT87_28280	COG1764	response to oxidative stress
KYT87_28285	COG1846	Transcriptional regulator
KYT87_28340	COG0640	Transcriptional regulator
KYT87_28380	COG1028	Short-chain dehydrogenase reductase Sdr
KYT87_28385	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
KYT87_28390	COG0513	Belongs to the DEAD box helicase family
KYT87_28410	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
KYT87_28415	COG2308	Evidence 4 Homologs of previously reported genes of
KYT87_28425	COG1305	Transglutaminase-like
KYT87_28445	COG1950	PFAM Membrane protein of
KYT87_28450	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
KYT87_28455	COG0438	transferase activity, transferring glycosyl groups
KYT87_28465	COG0596	Alpha beta hydrolase
KYT87_28470	COG0066	3-isopropylmalate dehydratase activity
KYT87_28480	COG3181	Tripartite tricarboxylate transporter family receptor
KYT87_28485	COG0583	DNA-binding transcription factor activity
KYT87_28495	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
KYT87_28515	COG1079	Belongs to the binding-protein-dependent transport system permease family
KYT87_28555	COG0601	transmembrane transport
KYT87_28560	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
KYT87_28565	COG0318	PFAM AMP-dependent synthetase and ligase
KYT87_28580	COG0477	Major facilitator Superfamily
KYT87_28585	COG0154	amidase activity
KYT87_28590	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
KYT87_28600	COG1560	Kdo2-lipid A biosynthetic process
KYT87_28605	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
KYT87_28615	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
KYT87_28620	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
KYT87_28630	COG0803	Belongs to the bacterial solute-binding protein 9 family
KYT87_28635	COG1108	ABC-type Mn2 Zn2 transport systems permease components
KYT87_28650	COG0735	belongs to the Fur family
KYT87_28655	COG0523	cobalamin synthesis protein
KYT87_28670	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
KYT87_28680	COG2096	Adenosyltransferase
KYT87_28695	COG1091	dTDP-4-dehydrorhamnose reductase activity
KYT87_28710	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
KYT87_28725	COG2226	methyltransferase
KYT87_28755	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
KYT87_28770	COG0321	lipoyl(octanoyl) transferase activity
KYT87_28775	COG2921	Belongs to the UPF0250 family
KYT87_28785	COG1686	Belongs to the peptidase S11 family
KYT87_28805	COG1127	ABC transporter
KYT87_28810	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
KYT87_28820	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
KYT87_28835	COG0859	PFAM glycosyl transferase family 9
KYT87_28840	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
KYT87_28845	COG0166	Belongs to the GPI family
KYT87_28850	COG0756	dUTP diphosphatase activity
KYT87_28855	COG2814	Major facilitator Superfamily
KYT87_28865	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
KYT87_28870	COG3568	Endonuclease Exonuclease Phosphatase
KYT87_28875	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
KYT87_28900	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
KYT87_28915	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
KYT87_28920	COG1956	GAF domain-containing protein
KYT87_28925	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
KYT87_28950	COG2186	Transcriptional regulator
KYT87_28985	COG2226	methyltransferase
KYT87_28990	COG2207	Transcriptional regulator
KYT87_28995	COG4774	siderophore transport
KYT87_29000	COG4948	Mandelate Racemase Muconate Lactonizing
KYT87_29005	COG0583	DNA-binding transcription factor activity
KYT87_29020	COG2814	Major facilitator Superfamily
KYT87_29035	COG0232	Belongs to the dGTPase family. Type 2 subfamily
KYT87_29040	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
KYT87_29045	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
KYT87_29060	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
KYT87_29065	COG0601	transmembrane transport
KYT87_29070	COG0747	negative chemotaxis
KYT87_29090	COG1965	Belongs to the frataxin family
KYT87_29105	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
KYT87_29110	COG1333	cytochrome c biogenesis protein
KYT87_29120	COG0218	Necessary for normal cell division and for the maintenance of normal septation
KYT87_29135	COG4232	protein-disulfide reductase activity
KYT87_29140	COG1324	tolerance protein
KYT87_29150	COG0203	ribosomal protein L17
KYT87_29155	COG0202	RNA polymerase activity
KYT87_29160	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
KYT87_29165	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
KYT87_29170	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
KYT87_29175	COG0257	Belongs to the bacterial ribosomal protein bL36 family
KYT87_29180	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
KYT87_29185	COG0201	protein transport
KYT87_29190	COG0200	Binds to the 23S rRNA
KYT87_29195	COG1841	ribosomal large subunit assembly
KYT87_29200	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
KYT87_29205	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
KYT87_29210	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
KYT87_29215	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
KYT87_29220	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
KYT87_29225	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
KYT87_29230	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
KYT87_29235	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
KYT87_29255	COG2207	Transcriptional regulator
KYT87_29295	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
KYT87_29300	COG0255	Belongs to the universal ribosomal protein uL29 family
KYT87_29305	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
KYT87_29310	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
KYT87_29315	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
KYT87_29320	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
KYT87_29325	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
KYT87_29330	COG0089	rRNA binding
KYT87_29340	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
KYT87_29345	COG0051	transcription antitermination factor activity, RNA binding
KYT87_29350	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
KYT87_29355	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
KYT87_29360	COG0049	tRNA binding
KYT87_29365	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
KYT87_29370	COG0745	RESPONSE REGULATOR receiver
KYT87_29385	COG2205	protein histidine kinase activity
KYT87_29400	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
KYT87_29405	COG0085	RNA polymerase activity
KYT87_29410	COG0222	ribosome binding
KYT87_29415	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
KYT87_29420	COG0081	regulation of translation
KYT87_29425	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
KYT87_29445	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
KYT87_29500	COG0583	DNA-binding transcription factor activity
KYT87_29505	COG0252	asparaginase activity
KYT87_29510	COG1475	DNA binding
KYT87_29520	COG1192	Involved in chromosome partitioning
KYT87_29525	COG0357	Ribosomal RNA small subunit methyltransferase G
KYT87_29530	COG0445	tRNA wobble uridine modification
KYT87_29535	COG1278	Cold shock
KYT87_29540	COG3180	Ammonia monooxygenase
KYT87_29545	COG0436	Aminotransferase
KYT87_29565	COG2205	protein histidine kinase activity
KYT87_29575	COG0038	chloride channel
KYT87_29595	COG0582	viral genome integration into host DNA
KYT87_29600	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
KYT87_29610	COG0601	transmembrane transport
KYT87_29615	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
KYT87_29620	COG0444	Belongs to the ABC transporter superfamily
KYT87_29625	COG4608	Belongs to the ABC transporter superfamily
KYT87_29630	COG1473	amidohydrolase
KYT87_29635	COG2175	clavaminate synthase activity
KYT87_29645	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
KYT87_29655	COG0753	catalase activity
KYT87_29665	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
KYT87_29670	COG0594	ribonuclease P activity
KYT87_29675	COG0230	Belongs to the bacterial ribosomal protein bL34 family