locus-tag class description CVS48_00035 PF13291 ACT domain CVS48_00035 PF00291 Pyridoxal-phosphate dependent enzyme CVS48_00045 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CVS48_00045 PF00575 S1 RNA binding domain CVS48_00045 PF03725 3' exoribonuclease family, domain 2 CVS48_00045 PF01138 3' exoribonuclease family, domain 1 CVS48_00045 PF00013 KH domain CVS48_00050 PF00312 Ribosomal protein S15 CVS48_00060 PF01066 CDP-alcohol phosphatidyltransferase CVS48_00065 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CVS48_00065 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CVS48_00070 PF10369 Small subunit of acetolactate synthase CVS48_00075 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CVS48_00075 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CVS48_00075 PF00205 Thiamine pyrophosphate enzyme, central domain CVS48_00080 PF12805 FUSC-like inner membrane protein yccS CVS48_00090 PF03883 Peroxide stress protein YaaA CVS48_00095 PF00106 short chain dehydrogenase CVS48_00100 PF02254 TrkA-N domain CVS48_00100 PF00999 Sodium/hydrogen exchanger family CVS48_00110 PF18495 Antitoxin VbhA CVS48_00115 PF02661 Fic/DOC family CVS48_00115 PF17841 BID domain of Bartonella effector protein (Bep) CVS48_00125 PF10011 Predicted membrane protein (DUF2254) CVS48_00130 PF01613 Flavin reductase like domain CVS48_00135 PF00795 Carbon-nitrogen hydrolase CVS48_00140 PF07690 Major Facilitator Superfamily CVS48_00150 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_00155 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CVS48_00155 PF13378 Enolase C-terminal domain-like CVS48_00165 PF01979 Amidohydrolase family CVS48_00190 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CVS48_00190 PF02403 Seryl-tRNA synthetase N-terminal domain CVS48_00195 PF00004 ATPase family associated with various cellular activities (AAA) CVS48_00195 PF16193 AAA C-terminal domain CVS48_00195 PF12002 MgsA AAA+ ATPase C terminal CVS48_00200 PF00795 Carbon-nitrogen hydrolase CVS48_00210 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CVS48_00215 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_00220 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_00220 PF12911 N-terminal TM domain of oligopeptide transport permease C CVS48_00225 PF00005 ABC transporter CVS48_00225 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS48_00230 PF00005 ABC transporter CVS48_00230 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS48_00235 PF01380 SIS domain CVS48_00235 PF01418 Helix-turn-helix domain, rpiR family CVS48_00240 PF07969 Amidohydrolase family CVS48_00245 PF01042 Endoribonuclease L-PSP CVS48_00250 PF03548 Outer membrane lipoprotein carrier protein LolA CVS48_00255 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CVS48_00255 PF09397 Ftsk gamma domain CVS48_00255 PF01580 FtsK/SpoIIIE family CVS48_00255 PF17854 FtsK alpha domain CVS48_00260 PF07992 Pyridine nucleotide-disulphide oxidoreductase CVS48_00265 PF01713 Smr domain CVS48_00265 PF00488 MutS domain V CVS48_00270 PF00893 Small Multidrug Resistance protein CVS48_00285 PF00474 Sodium:solute symporter family CVS48_00300 PF03814 Potassium-transporting ATPase A subunit CVS48_00310 PF02669 K+-transporting ATPase, c chain CVS48_00315 PF00512 His Kinase A (phospho-acceptor) domain CVS48_00315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_00315 PF13493 Domain of unknown function (DUF4118) CVS48_00315 PF02702 Osmosensitive K+ channel His kinase sensor domain CVS48_00315 PF13492 GAF domain CVS48_00320 PF00072 Response regulator receiver domain CVS48_00320 PF00486 Transcriptional regulatory protein, C terminal CVS48_00335 PF00701 Dihydrodipicolinate synthetase family CVS48_00340 PF00672 HAMP domain CVS48_00340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CVS48_00340 PF17200 Single Cache domain 2 CVS48_00350 PF00180 Isocitrate/isopropylmalate dehydrogenase CVS48_00365 PF00034 Cytochrome c CVS48_00370 PF17862 AAA+ lid domain CVS48_00370 PF00004 ATPase family associated with various cellular activities (AAA) CVS48_00370 PF01434 Peptidase family M41 CVS48_00390 PF13302 Acetyltransferase (GNAT) domain CVS48_00395 PF00675 Insulinase (Peptidase family M16) CVS48_00395 PF05193 Peptidase M16 inactive domain CVS48_00410 PF00684 DnaJ central domain CVS48_00410 PF00226 DnaJ domain CVS48_00410 PF01556 DnaJ C terminal domain CVS48_00415 PF00012 Hsp70 protein CVS48_00425 PF01025 GrpE CVS48_00435 PF00762 Ferrochelatase CVS48_00440 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding CVS48_00440 PF01628 HrcA protein C terminal domain CVS48_00445 PF01513 ATP-NAD kinase CVS48_00450 PF02463 RecF/RecN/SMC N terminal domain CVS48_00455 PF01475 Ferric uptake regulator family CVS48_00460 PF04355 SmpA / OmlA family CVS48_00465 PF05173 Dihydrodipicolinate reductase, C-terminus CVS48_00465 PF01113 Dihydrodipicolinate reductase, N-terminus CVS48_00470 PF01565 FAD binding domain CVS48_00470 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CVS48_00480 PF00589 Phage integrase family CVS48_00480 PF13356 Arm DNA-binding domain CVS48_00485 PF00665 Integrase core domain CVS48_00490 PF01695 IstB-like ATP binding protein CVS48_00530 PF00072 Response regulator receiver domain CVS48_00530 PF00486 Transcriptional regulatory protein, C terminal CVS48_00535 PF00672 HAMP domain CVS48_00535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_00535 PF00512 His Kinase A (phospho-acceptor) domain CVS48_00545 PF01022 Bacterial regulatory protein, arsR family CVS48_00560 PF01758 Sodium Bile acid symporter family CVS48_00565 PF03960 ArsC family CVS48_00570 PF03551 Transcriptional regulator PadR-like family CVS48_00595 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CVS48_00650 PF04002 RadC-like JAB domain CVS48_00705 PF12728 Helix-turn-helix domain CVS48_00715 PF17862 AAA+ lid domain CVS48_00715 PF06480 FtsH Extracellular CVS48_00715 PF00004 ATPase family associated with various cellular activities (AAA) CVS48_00715 PF01434 Peptidase family M41 CVS48_00825 PF06067 Domain of unknown function (DUF932) CVS48_00850 PF00403 Heavy-metal-associated domain CVS48_00850 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CVS48_00850 PF07992 Pyridine nucleotide-disulphide oxidoreductase CVS48_00855 PF00403 Heavy-metal-associated domain CVS48_00860 PF02411 MerT mercuric transport protein CVS48_00865 PF09278 MerR, DNA binding CVS48_00865 PF00376 MerR family regulatory protein CVS48_00910 PF01252 Signal peptidase (SPase) II CVS48_00915 PF00403 Heavy-metal-associated domain CVS48_00920 PF13411 MerR HTH family regulatory protein CVS48_00935 PF01131 DNA topoisomerase CVS48_00935 PF01751 Toprim domain CVS48_00940 PF00436 Single-strand binding protein family CVS48_00975 PF13614 AAA domain CVS48_01000 PF18416 N-acetylglucosamine binding protein domain 2 CVS48_01000 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading CVS48_01005 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading CVS48_01005 PF18416 N-acetylglucosamine binding protein domain 2 CVS48_01010 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading CVS48_01010 PF18416 N-acetylglucosamine binding protein domain 2 CVS48_01015 PF00512 His Kinase A (phospho-acceptor) domain CVS48_01015 PF13493 Domain of unknown function (DUF4118) CVS48_01015 PF02702 Osmosensitive K+ channel His kinase sensor domain CVS48_01015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_01020 PF00486 Transcriptional regulatory protein, C terminal CVS48_01020 PF00072 Response regulator receiver domain CVS48_01030 PF08334 Type II secretion system (T2SS), protein G CVS48_01030 PF07963 Prokaryotic N-terminal methylation motif CVS48_01035 PF08334 Type II secretion system (T2SS), protein G CVS48_01035 PF07963 Prokaryotic N-terminal methylation motif CVS48_01040 PF03958 Bacterial type II/III secretion system short domain CVS48_01040 PF00263 Bacterial type II and III secretion system protein CVS48_01070 PF00482 Type II secretion system (T2SS), protein F CVS48_01075 PF01464 Transglycosylase SLT domain CVS48_01080 PF07963 Prokaryotic N-terminal methylation motif CVS48_01080 PF08334 Type II secretion system (T2SS), protein G CVS48_01110 PF01571 Aminomethyltransferase folate-binding domain CVS48_01110 PF17806 Sarcosine oxidase A3 domain CVS48_01110 PF07992 Pyridine nucleotide-disulphide oxidoreductase CVS48_01110 PF08669 Glycine cleavage T-protein C-terminal barrel domain CVS48_01115 PF04267 Sarcosine oxidase, delta subunit family CVS48_01120 PF01266 FAD dependent oxidoreductase CVS48_01125 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CVS48_01125 PF08240 Alcohol dehydrogenase GroES-like domain CVS48_01130 PF12833 Helix-turn-helix domain CVS48_01130 PF01965 DJ-1/PfpI family CVS48_01135 PF00111 2Fe-2S iron-sulfur cluster binding domain CVS48_01135 PF00970 Oxidoreductase FAD-binding domain CVS48_01135 PF00175 Oxidoreductase NAD-binding domain CVS48_01140 PF00355 Rieske [2Fe-2S] domain CVS48_01140 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CVS48_01150 PF01012 Electron transfer flavoprotein domain CVS48_01150 PF00766 Electron transfer flavoprotein FAD-binding domain CVS48_01155 PF13183 4Fe-4S dicluster domain CVS48_01155 PF02754 Cysteine-rich domain CVS48_01155 PF02665 Nitrate reductase gamma subunit CVS48_01160 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CVS48_01170 PF01244 Membrane dipeptidase (Peptidase family M19) CVS48_01175 PF00464 Serine hydroxymethyltransferase CVS48_01195 PF13193 AMP-binding enzyme C-terminal domain CVS48_01195 PF00501 AMP-binding enzyme CVS48_01205 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CVS48_01205 PF02770 Acyl-CoA dehydrogenase, middle domain CVS48_01205 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CVS48_01225 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_01235 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_01270 PF03466 LysR substrate binding domain CVS48_01270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_01275 PF00293 NUDIX domain CVS48_01275 PF09297 NADH pyrophosphatase zinc ribbon domain CVS48_01280 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CVS48_01285 PF04377 Arginine-tRNA-protein transferase, C terminus CVS48_01285 PF04376 Arginine-tRNA-protein transferase, N terminus CVS48_01290 PF01180 Dihydroorotate dehydrogenase CVS48_01300 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_01305 PF09339 IclR helix-turn-helix domain CVS48_01305 PF01614 Bacterial transcriptional regulator CVS48_01310 PF02464 Competence-damaged protein CVS48_01310 PF00994 Probable molybdopterin binding domain CVS48_01310 PF18146 Damage-inducible protein CinA KH domain CVS48_01325 PF00271 Helicase conserved C-terminal domain CVS48_01325 PF00270 DEAD/DEAH box helicase CVS48_01350 PF00561 alpha/beta hydrolase fold CVS48_01355 PF13181 Tetratricopeptide repeat CVS48_01355 PF01435 Peptidase family M48 CVS48_01360 PF00483 Nucleotidyl transferase CVS48_01375 PF00689 Cation transporting ATPase, C-terminus CVS48_01375 PF00690 Cation transporter/ATPase, N-terminus CVS48_01390 PF00557 Metallopeptidase family M24 CVS48_01390 PF05195 Aminopeptidase P, N-terminal domain CVS48_01400 PF01494 FAD binding domain CVS48_01405 PF01207 Dihydrouridine synthase (Dus) CVS48_01410 PF02954 Bacterial regulatory protein, Fis family CVS48_01415 PF01808 AICARFT/IMPCHase bienzyme CVS48_01415 PF02142 MGS-like domain CVS48_01420 PF02075 Crossover junction endodeoxyribonuclease RuvC CVS48_01425 PF07499 RuvA, C-terminal domain CVS48_01425 PF01330 RuvA N terminal domain CVS48_01430 PF16363 GDP-mannose 4,6 dehydratase CVS48_01435 PF00291 Pyridoxal-phosphate dependent enzyme CVS48_01440 PF05496 Holliday junction DNA helicase RuvB P-loop domain CVS48_01440 PF05491 RuvB C-terminal winged helix domain CVS48_01440 PF17864 RuvB AAA lid domain CVS48_01445 PF00512 His Kinase A (phospho-acceptor) domain CVS48_01445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_01450 PF00486 Transcriptional regulatory protein, C terminal CVS48_01450 PF00072 Response regulator receiver domain CVS48_01460 PF00271 Helicase conserved C-terminal domain CVS48_01460 PF09382 RQC domain CVS48_01460 PF16124 RecQ zinc-binding CVS48_01460 PF00570 HRDC domain CVS48_01460 PF00270 DEAD/DEAH box helicase CVS48_01470 PF01654 Cytochrome bd terminal oxidase subunit I CVS48_01475 PF00749 tRNA synthetases class I (E and Q), catalytic domain CVS48_01475 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CVS48_01480 PF05209 Septum formation inhibitor MinC, N-terminal domain CVS48_01480 PF03775 Septum formation inhibitor MinC, C-terminal domain CVS48_01485 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CVS48_01490 PF03776 Septum formation topological specificity factor MinE CVS48_01505 PF01850 PIN domain CVS48_01515 PF12848 ABC transporter CVS48_01515 PF00005 ABC transporter CVS48_01530 PF00005 ABC transporter CVS48_01530 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS48_01535 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS48_01535 PF00005 ABC transporter CVS48_01540 PF12911 N-terminal TM domain of oligopeptide transport permease C CVS48_01540 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_01550 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CVS48_01570 PF00111 2Fe-2S iron-sulfur cluster binding domain CVS48_01575 PF00355 Rieske [2Fe-2S] domain CVS48_01575 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CVS48_01580 PF00866 Ring hydroxylating beta subunit CVS48_01585 PF00501 AMP-binding enzyme CVS48_01585 PF13193 AMP-binding enzyme C-terminal domain CVS48_01600 PF04199 Putative cyclase CVS48_01620 PF12399 Branched-chain amino acid ATP-binding cassette transporter CVS48_01620 PF00005 ABC transporter CVS48_01625 PF00005 ABC transporter CVS48_01630 PF00535 Glycosyl transferase family 2 CVS48_01635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_01635 PF03466 LysR substrate binding domain CVS48_01640 PF00294 pfkB family carbohydrate kinase CVS48_01645 PF01081 KDPG and KHG aldolase CVS48_01655 PF00005 ABC transporter CVS48_01655 PF17755 UvrA DNA-binding domain CVS48_01655 PF17760 UvrA interaction domain CVS48_01660 PF04715 Anthranilate synthase component I, N terminal region CVS48_01660 PF00425 chorismate binding enzyme CVS48_01675 PF03466 LysR substrate binding domain CVS48_01675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_01680 PF00355 Rieske [2Fe-2S] domain CVS48_01680 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CVS48_01685 PF13577 SnoaL-like domain CVS48_01690 PF00355 Rieske [2Fe-2S] domain CVS48_01695 PF00899 ThiF family CVS48_01700 PF02321 Outer membrane efflux protein CVS48_01705 PF00005 ABC transporter CVS48_01705 PF02687 FtsX-like permease family CVS48_01705 PF12704 MacB-like periplasmic core domain CVS48_01710 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CVS48_01725 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CVS48_01725 PF01243 Pyridoxamine 5'-phosphate oxidase CVS48_01730 PF01613 Flavin reductase like domain CVS48_01735 PF01266 FAD dependent oxidoreductase CVS48_01740 PF00551 Formyl transferase CVS48_01745 PF03466 LysR substrate binding domain CVS48_01745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_01750 PF02770 Acyl-CoA dehydrogenase, middle domain CVS48_01750 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CVS48_01750 PF18158 Adaptive response protein AidB N-terminal domain CVS48_01755 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_01760 PF02515 CoA-transferase family III CVS48_01765 PF13520 Amino acid permease CVS48_01775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_01775 PF03466 LysR substrate binding domain CVS48_01780 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_01790 PF00206 Lyase CVS48_01790 PF10415 Fumarase C C-terminus CVS48_01795 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CVS48_01800 PF11741 AMIN domain CVS48_01800 PF01520 N-acetylmuramoyl-L-alanine amidase CVS48_01805 PF09335 SNARE associated Golgi protein CVS48_01810 PF01119 DNA mismatch repair protein, C-terminal domain CVS48_01810 PF08676 MutL C terminal dimerisation domain CVS48_01820 PF02769 AIR synthase related protein, C-terminal domain CVS48_01820 PF00586 AIR synthase related protein, N-terminal domain CVS48_01825 PF00308 Bacterial dnaA protein CVS48_01835 PF12627 Probable RNA and SrmB- binding site of polymerase A CVS48_01835 PF01743 Poly A polymerase head domain CVS48_01835 PF12626 Polymerase A arginine-rich C-terminus CVS48_01840 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CVS48_01845 PF00294 pfkB family carbohydrate kinase CVS48_01850 PF03328 HpcH/HpaI aldolase/citrate lyase family CVS48_01855 PF02515 CoA-transferase family III CVS48_01865 PF03466 LysR substrate binding domain CVS48_01865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_01870 PF00378 Enoyl-CoA hydratase/isomerase CVS48_01875 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CVS48_01875 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CVS48_01875 PF02770 Acyl-CoA dehydrogenase, middle domain CVS48_01880 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CVS48_01880 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CVS48_01880 PF02770 Acyl-CoA dehydrogenase, middle domain CVS48_01895 PF13193 AMP-binding enzyme C-terminal domain CVS48_01895 PF00501 AMP-binding enzyme CVS48_01900 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_01910 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_01920 PF00106 short chain dehydrogenase CVS48_01925 PF13452 N-terminal half of MaoC dehydratase CVS48_01930 PF02515 CoA-transferase family III CVS48_01945 PF00378 Enoyl-CoA hydratase/isomerase CVS48_01950 PF02091 Glycyl-tRNA synthetase alpha subunit CVS48_01955 PF05746 DALR anticodon binding domain CVS48_01955 PF02092 Glycyl-tRNA synthetase beta subunit CVS48_01965 PF01553 Acyltransferase CVS48_01975 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CVS48_01980 PF01327 Polypeptide deformylase CVS48_01990 PF07670 Nucleoside recognition CVS48_01995 PF02887 Pyruvate kinase, alpha/beta domain CVS48_01995 PF00224 Pyruvate kinase, barrel domain CVS48_02000 PF02595 Glycerate kinase family CVS48_02005 PF00398 Ribosomal RNA adenine dimethylase CVS48_02010 PF00639 PPIC-type PPIASE domain CVS48_02010 PF09312 SurA N-terminal domain CVS48_02015 PF04453 LPS transport system D CVS48_02020 PF01636 Phosphotransferase enzyme family CVS48_02025 PF00483 Nucleotidyl transferase CVS48_02035 PF01494 FAD binding domain CVS48_02050 PF01329 Pterin 4 alpha carbinolamine dehydratase CVS48_02055 PF04972 BON domain CVS48_02055 PF00691 OmpA family CVS48_02080 PF04717 Type VI secretion system, phage-baseplate injector CVS48_02085 PF07724 AAA domain (Cdc48 subfamily) CVS48_02085 PF17871 AAA lid domain CVS48_02085 PF00004 ATPase family associated with various cellular activities (AAA) CVS48_02085 PF10431 C-terminal, D2-small domain, of ClpB protein CVS48_02140 PF04717 Type VI secretion system, phage-baseplate injector CVS48_02195 PF04972 BON domain CVS48_02195 PF00691 OmpA family CVS48_02220 PF16200 C-terminal region of band_7 CVS48_02220 PF01145 SPFH domain / Band 7 family CVS48_02245 PF00440 Bacterial regulatory proteins, tetR family CVS48_02250 PF00990 Diguanylate cyclase, GGDEF domain CVS48_02250 PF17151 Periplasmic sensor domain CVS48_02255 PF05170 AsmA family CVS48_02260 PF00884 Sulfatase CVS48_02265 PF03352 Methyladenine glycosylase CVS48_02270 PF03692 Putative zinc- or iron-chelating domain CVS48_02280 PF01475 Ferric uptake regulator family CVS48_02290 PF03466 LysR substrate binding domain CVS48_02290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_02295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CVS48_02295 PF00672 HAMP domain CVS48_02295 PF02203 Tar ligand binding domain homologue CVS48_02305 PF03797 Autotransporter beta-domain CVS48_02305 PF12951 Passenger-associated-transport-repeat CVS48_02305 PF00082 Subtilase family CVS48_02310 PF12951 Passenger-associated-transport-repeat CVS48_02320 PF03180 NLPA lipoprotein CVS48_02325 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_02330 PF09383 NIL domain CVS48_02330 PF00005 ABC transporter CVS48_02335 PF01055 Glycosyl hydrolases family 31 CVS48_02335 PF13802 Galactose mutarotase-like CVS48_02340 PF01266 FAD dependent oxidoreductase CVS48_02340 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CVS48_02345 PF00459 Inositol monophosphatase family CVS48_02350 PF13193 AMP-binding enzyme C-terminal domain CVS48_02350 PF00501 AMP-binding enzyme CVS48_02355 PF01546 Peptidase family M20/M25/M40 CVS48_02355 PF07687 Peptidase dimerisation domain CVS48_02360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_02360 PF03466 LysR substrate binding domain CVS48_02365 PF03601 Conserved hypothetical protein 698 CVS48_02370 PF03061 Thioesterase superfamily CVS48_02375 PF03448 MgtE intracellular N domain CVS48_02375 PF00571 CBS domain CVS48_02375 PF01769 Divalent cation transporter CVS48_02380 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP CVS48_02390 PF01037 Lrp/AsnC ligand binding domain CVS48_02400 PF00205 Thiamine pyrophosphate enzyme, central domain CVS48_02400 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CVS48_02400 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CVS48_02405 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_02410 PF07729 FCD domain CVS48_02410 PF00392 Bacterial regulatory proteins, gntR family CVS48_02415 PF00665 Integrase core domain CVS48_02425 PF02810 SEC-C motif CVS48_02425 PF01043 SecA preprotein cross-linking domain CVS48_02425 PF07516 SecA Wing and Scaffold domain CVS48_02425 PF07517 SecA DEAD-like domain CVS48_02430 PF01551 Peptidase family M23 CVS48_02430 PF01476 LysM domain CVS48_02430 PF08525 Opacity-associated protein A N-terminal motif CVS48_02440 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CVS48_02445 PF12327 FtsZ family, C-terminal domain CVS48_02445 PF00091 Tubulin/FtsZ family, GTPase domain CVS48_02450 PF02491 SHS2 domain inserted in FTSA CVS48_02455 PF03799 Cell division protein FtsQ CVS48_02455 PF08478 POTRA domain, FtsQ-type CVS48_02460 PF07478 D-ala D-ala ligase C-terminus CVS48_02460 PF01820 D-ala D-ala ligase N-terminus CVS48_02465 PF02875 Mur ligase family, glutamate ligase domain CVS48_02465 PF01225 Mur ligase family, catalytic domain CVS48_02465 PF08245 Mur ligase middle domain CVS48_02470 PF03033 Glycosyltransferase family 28 N-terminal domain CVS48_02470 PF04101 Glycosyltransferase family 28 C-terminal domain CVS48_02475 PF01098 Cell cycle protein CVS48_02480 PF02875 Mur ligase family, glutamate ligase domain CVS48_02480 PF08245 Mur ligase middle domain CVS48_02485 PF00953 Glycosyl transferase family 4 CVS48_02490 PF02875 Mur ligase family, glutamate ligase domain CVS48_02490 PF08245 Mur ligase middle domain CVS48_02495 PF03717 Penicillin-binding Protein dimerisation domain CVS48_02495 PF00905 Penicillin binding protein transpeptidase domain CVS48_02500 PF04999 Cell division protein FtsL CVS48_02505 PF01795 MraW methylase family CVS48_02510 PF02381 MraZ protein, putative antitoxin-like CVS48_02525 PF01979 Amidohydrolase family CVS48_02530 PF01546 Peptidase family M20/M25/M40 CVS48_02530 PF07687 Peptidase dimerisation domain CVS48_02565 PF01037 Lrp/AsnC ligand binding domain CVS48_02570 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CVS48_02575 PF01625 Peptide methionine sulfoxide reductase CVS48_02580 PF00034 Cytochrome c CVS48_02585 PF00920 Dehydratase family CVS48_02590 PF01790 Prolipoprotein diacylglyceryl transferase CVS48_02625 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CVS48_02625 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CVS48_02630 PF02525 Flavodoxin-like fold CVS48_02635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_02635 PF03466 LysR substrate binding domain CVS48_02640 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CVS48_02645 PF01970 Tripartite tricarboxylate transporter TctA family CVS48_02660 PF00486 Transcriptional regulatory protein, C terminal CVS48_02660 PF00072 Response regulator receiver domain CVS48_02665 PF00293 NUDIX domain CVS48_02670 PF03129 Anticodon binding domain CVS48_02670 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CVS48_02670 PF04073 Aminoacyl-tRNA editing domain CVS48_02675 PF03061 Thioesterase superfamily CVS48_02680 PF01618 MotA/TolQ/ExbB proton channel family CVS48_02685 PF02472 Biopolymer transport protein ExbD/TolR CVS48_02695 PF07676 WD40-like Beta Propeller Repeat CVS48_02695 PF04052 TolB amino-terminal domain CVS48_02700 PF00691 OmpA family CVS48_02710 PF01032 FecCD transport family CVS48_02715 PF00005 ABC transporter CVS48_02730 PF00679 Elongation factor G C-terminus CVS48_02730 PF14492 Elongation Factor G, domain II CVS48_02730 PF03764 Elongation factor G, domain IV CVS48_02730 PF03144 Elongation factor Tu domain 2 CVS48_02730 PF00009 Elongation factor Tu GTP binding domain CVS48_02735 PF00582 Universal stress protein family CVS48_02745 PF00392 Bacterial regulatory proteins, gntR family CVS48_02745 PF00155 Aminotransferase class I and II CVS48_02750 PF00892 EamA-like transporter family CVS48_02755 PF01810 LysE type translocator CVS48_02775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_02775 PF03466 LysR substrate binding domain CVS48_02790 PF00535 Glycosyl transferase family 2 CVS48_02800 PF03616 Sodium/glutamate symporter CVS48_02815 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CVS48_02825 PF00929 Exonuclease CVS48_02830 PF00873 AcrB/AcrD/AcrF family CVS48_02835 PF13533 Biotin-lipoyl like CVS48_02840 PF00075 RNase H CVS48_02845 PF08241 Methyltransferase domain CVS48_02855 PF01464 Transglycosylase SLT domain CVS48_02855 PF01476 LysM domain CVS48_02875 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_02880 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CVS48_02880 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CVS48_02900 PF13954 PapC N-terminal domain CVS48_02900 PF00577 Outer membrane usher protein CVS48_02900 PF13953 PapC C-terminal domain CVS48_02910 PF00072 Response regulator receiver domain CVS48_02910 PF00196 Bacterial regulatory proteins, luxR family CVS48_02935 PF04293 SpoVR like protein CVS48_02940 PF04285 Protein of unknown function (DUF444) CVS48_02945 PF08298 PrkA AAA domain CVS48_02945 PF06798 PrkA serine protein kinase C-terminal domain CVS48_02950 PF01872 RibD C-terminal domain CVS48_02950 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CVS48_02965 PF03477 ATP cone domain CVS48_02970 PF00464 Serine hydroxymethyltransferase CVS48_02975 PF01161 Phosphatidylethanolamine-binding protein CVS48_02980 PF01479 S4 domain CVS48_02980 PF00579 tRNA synthetases class I (W and Y) CVS48_02985 PF08460 Bacterial SH3 domain CVS48_02985 PF01551 Peptidase family M23 CVS48_02990 PF03702 Anhydro-N-acetylmuramic acid kinase CVS48_02995 PF01521 Iron-sulphur cluster biosynthesis CVS48_03005 PF02774 Semialdehyde dehydrogenase, dimerisation domain CVS48_03005 PF01118 Semialdehyde dehydrogenase, NAD binding domain CVS48_03010 PF00380 Ribosomal protein S9/S16 CVS48_03015 PF00572 Ribosomal protein L13 CVS48_03020 PF00005 ABC transporter CVS48_03025 PF00005 ABC transporter CVS48_03025 PF12399 Branched-chain amino acid ATP-binding cassette transporter CVS48_03030 PF11862 Domain of unknown function (DUF3382) CVS48_03030 PF02653 Branched-chain amino acid transport system / permease component CVS48_03035 PF02653 Branched-chain amino acid transport system / permease component CVS48_03040 PF13458 Periplasmic binding protein CVS48_03045 PF03480 Bacterial extracellular solute-binding protein, family 7 CVS48_03050 PF01523 Putative modulator of DNA gyrase CVS48_03055 PF04751 Protein of unknown function (DUF615) CVS48_03070 PF00005 ABC transporter CVS48_03075 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_03080 PF00857 Isochorismatase family CVS48_03085 PF00583 Acetyltransferase (GNAT) family CVS48_03085 PF13380 CoA binding domain CVS48_03085 PF13607 Succinyl-CoA ligase like flavodoxin domain CVS48_03090 PF00749 tRNA synthetases class I (E and Q), catalytic domain CVS48_03095 PF07690 Major Facilitator Superfamily CVS48_03105 PF01037 Lrp/AsnC ligand binding domain CVS48_03115 PF00317 Ribonucleotide reductase, all-alpha domain CVS48_03115 PF03477 ATP cone domain CVS48_03115 PF02867 Ribonucleotide reductase, barrel domain CVS48_03120 PF00268 Ribonucleotide reductase, small chain CVS48_03135 PF00501 AMP-binding enzyme CVS48_03135 PF13193 AMP-binding enzyme C-terminal domain CVS48_03140 PF03062 MBOAT, membrane-bound O-acyltransferase family CVS48_03165 PF00294 pfkB family carbohydrate kinase CVS48_03165 PF01467 Cytidylyltransferase-like CVS48_03180 PF02785 Biotin carboxylase C-terminal domain CVS48_03180 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CVS48_03180 PF00289 Biotin carboxylase, N-terminal domain CVS48_03185 PF00364 Biotin-requiring enzyme CVS48_03190 PF01220 Dehydroquinase class II CVS48_03195 PF08534 Redoxin CVS48_03200 PF08245 Mur ligase middle domain CVS48_03200 PF02875 Mur ligase family, glutamate ligase domain CVS48_03200 PF01225 Mur ligase family, catalytic domain CVS48_03205 PF05728 Uncharacterised protein family (UPF0227) CVS48_03210 PF00773 RNB domain CVS48_03215 PF00072 Response regulator receiver domain CVS48_03215 PF00486 Transcriptional regulatory protein, C terminal CVS48_03220 PF08521 Two-component sensor kinase N-terminal CVS48_03220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_03220 PF00512 His Kinase A (phospho-acceptor) domain CVS48_03230 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_03235 PF00005 ABC transporter CVS48_03235 PF08402 TOBE domain CVS48_03245 PF01488 Shikimate / quinate 5-dehydrogenase CVS48_03245 PF08501 Shikimate dehydrogenase substrate binding domain CVS48_03245 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CVS48_03250 PF00912 Transglycosylase CVS48_03260 PF00149 Calcineurin-like phosphoesterase CVS48_03265 PF00872 Transposase, Mutator family CVS48_03270 PF00005 ABC transporter CVS48_03275 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_03280 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_03285 PF00497 Bacterial extracellular solute-binding proteins, family 3 CVS48_03295 PF03737 Aldolase/RraA CVS48_03305 PF01553 Acyltransferase CVS48_03310 PF01979 Amidohydrolase family CVS48_03325 PF03652 Holliday junction resolvase CVS48_03330 PF02622 Uncharacterized ACR, COG1678 CVS48_03335 PF00301 Rubredoxin CVS48_03340 PF08543 Phosphomethylpyrimidine kinase CVS48_03345 PF02581 Thiamine monophosphate synthase CVS48_03350 PF00202 Aminotransferase class-III CVS48_03355 PF01464 Transglycosylase SLT domain CVS48_03370 PF00857 Isochorismatase family CVS48_03375 PF00866 Ring hydroxylating beta subunit CVS48_03380 PF00355 Rieske [2Fe-2S] domain CVS48_03380 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CVS48_03385 PF01738 Dienelactone hydrolase family CVS48_03395 PF12833 Helix-turn-helix domain CVS48_03410 PF00501 AMP-binding enzyme CVS48_03410 PF13193 AMP-binding enzyme C-terminal domain CVS48_03415 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CVS48_03415 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CVS48_03415 PF02770 Acyl-CoA dehydrogenase, middle domain CVS48_03420 PF00378 Enoyl-CoA hydratase/isomerase CVS48_03430 PF01494 FAD binding domain CVS48_03435 PF00563 EAL domain CVS48_03435 PF00990 Diguanylate cyclase, GGDEF domain CVS48_03435 PF03707 Bacterial signalling protein N terminal repeat CVS48_03440 PF00990 Diguanylate cyclase, GGDEF domain CVS48_03440 PF17151 Periplasmic sensor domain CVS48_03445 PF09345 Domain of unknown function (DUF1987) CVS48_03460 PF00005 ABC transporter CVS48_03465 PF00005 ABC transporter CVS48_03465 PF12399 Branched-chain amino acid ATP-binding cassette transporter CVS48_03470 PF02653 Branched-chain amino acid transport system / permease component CVS48_03470 PF11862 Domain of unknown function (DUF3382) CVS48_03475 PF02653 Branched-chain amino acid transport system / permease component CVS48_03495 PF01960 ArgJ family CVS48_03505 PF00293 NUDIX domain CVS48_03520 PF07969 Amidohydrolase family CVS48_03525 PF01266 FAD dependent oxidoreductase CVS48_03530 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_03540 PF00873 AcrB/AcrD/AcrF family CVS48_03545 PF00873 AcrB/AcrD/AcrF family CVS48_03550 PF13533 Biotin-lipoyl like CVS48_03555 PF07072 Cell division protein CVS48_03560 PF01121 Dephospho-CoA kinase CVS48_03565 PF06750 Bacterial Peptidase A24 N-terminal domain CVS48_03565 PF01478 Type IV leader peptidase family CVS48_03575 PF00072 Response regulator receiver domain CVS48_03575 PF00196 Bacterial regulatory proteins, luxR family CVS48_03580 PF02569 Pantoate-beta-alanine ligase CVS48_03585 PF02616 Segregation and condensation protein ScpA CVS48_03595 PF07690 Major Facilitator Superfamily CVS48_03600 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CVS48_03600 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CVS48_03605 PF00872 Transposase, Mutator family CVS48_03615 PF00633 Helix-hairpin-helix motif CVS48_03615 PF00730 HhH-GPD superfamily base excision DNA repair protein CVS48_03615 PF10576 Iron-sulfur binding domain of endonuclease III CVS48_03615 PF14815 NUDIX domain CVS48_03625 PF08241 Methyltransferase domain CVS48_03630 PF08125 Mannitol dehydrogenase C-terminal domain CVS48_03630 PF01232 Mannitol dehydrogenase Rossmann domain CVS48_03635 PF13378 Enolase C-terminal domain-like CVS48_03635 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CVS48_03640 PF00005 ABC transporter CVS48_03645 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_03650 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_03655 PF00107 Zinc-binding dehydrogenase CVS48_03655 PF08240 Alcohol dehydrogenase GroES-like domain CVS48_03665 PF01464 Transglycosylase SLT domain CVS48_03665 PF00497 Bacterial extracellular solute-binding proteins, family 3 CVS48_03670 PF07729 FCD domain CVS48_03670 PF00392 Bacterial regulatory proteins, gntR family CVS48_03675 PF01425 Amidase CVS48_03680 PF02574 Homocysteine S-methyltransferase CVS48_03680 PF02310 B12 binding domain CVS48_03680 PF02607 B12 binding domain CVS48_03680 PF00809 Pterin binding enzyme CVS48_03680 PF02965 Vitamin B12 dependent methionine synthase, activation domain CVS48_03685 PF00593 TonB dependent receptor CVS48_03685 PF07715 TonB-dependent Receptor Plug Domain CVS48_03690 PF01497 Periplasmic binding protein CVS48_03695 PF05690 Thiazole biosynthesis protein ThiG CVS48_03700 PF08543 Phosphomethylpyrimidine kinase CVS48_03710 PF02321 Outer membrane efflux protein CVS48_03715 PF00665 Integrase core domain CVS48_03720 PF01467 Cytidylyltransferase-like CVS48_03730 PF03109 ABC1 family CVS48_03745 PF01209 ubiE/COQ5 methyltransferase family CVS48_03750 PF00072 Response regulator receiver domain CVS48_03750 PF00486 Transcriptional regulatory protein, C terminal CVS48_03755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_03755 PF11808 Phosphate regulon sensor protein PhoR CVS48_03755 PF00989 PAS fold CVS48_03755 PF00512 His Kinase A (phospho-acceptor) domain CVS48_03760 PF00486 Transcriptional regulatory protein, C terminal CVS48_03760 PF00072 Response regulator receiver domain CVS48_03765 PF00672 HAMP domain CVS48_03765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_03765 PF00512 His Kinase A (phospho-acceptor) domain CVS48_03770 PF07732 Multicopper oxidase CVS48_03770 PF07731 Multicopper oxidase CVS48_03770 PF00394 Multicopper oxidase CVS48_03775 PF05275 Copper resistance protein B precursor (CopB) CVS48_03785 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CVS48_03785 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CVS48_03790 PF00665 Integrase core domain CVS48_03795 PF03466 LysR substrate binding domain CVS48_03795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_03805 PF02682 Carboxyltransferase domain, subdomain C and D CVS48_03810 PF02626 Carboxyltransferase domain, subdomain A and B CVS48_03815 PF00392 Bacterial regulatory proteins, gntR family CVS48_03815 PF07729 FCD domain CVS48_03820 PF03458 UPF0126 domain CVS48_03830 PF07690 Major Facilitator Superfamily CVS48_03835 PF07021 Methionine biosynthesis protein MetW CVS48_03835 PF00561 alpha/beta hydrolase fold CVS48_03840 PF00561 alpha/beta hydrolase fold CVS48_03845 PF02615 Malate/L-lactate dehydrogenase CVS48_03855 PF03472 Autoinducer binding domain CVS48_03855 PF00196 Bacterial regulatory proteins, luxR family CVS48_03870 PF04262 Glutamate-cysteine ligase CVS48_03885 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_03890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_03890 PF03466 LysR substrate binding domain CVS48_03895 PF07859 alpha/beta hydrolase fold CVS48_03900 PF07729 FCD domain CVS48_03900 PF00392 Bacterial regulatory proteins, gntR family CVS48_03905 PF00005 ABC transporter CVS48_03910 PF00005 ABC transporter CVS48_03915 PF11862 Domain of unknown function (DUF3382) CVS48_03915 PF02653 Branched-chain amino acid transport system / permease component CVS48_03920 PF02653 Branched-chain amino acid transport system / permease component CVS48_03930 PF01557 Fumarylacetoacetate (FAA) hydrolase family CVS48_03935 PF07883 Cupin domain CVS48_03950 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CVS48_03955 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CVS48_03955 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CVS48_03955 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain CVS48_03960 PF02515 CoA-transferase family III CVS48_03970 PF00440 Bacterial regulatory proteins, tetR family CVS48_03975 PF03060 Nitronate monooxygenase CVS48_03980 PF00378 Enoyl-CoA hydratase/isomerase CVS48_03985 PF00378 Enoyl-CoA hydratase/isomerase CVS48_03990 PF01256 Carbohydrate kinase CVS48_04000 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CVS48_04005 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family CVS48_04010 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_04015 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_04015 PF12911 N-terminal TM domain of oligopeptide transport permease C CVS48_04020 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS48_04020 PF00005 ABC transporter CVS48_04025 PF00005 ABC transporter CVS48_04025 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS48_04035 PF01546 Peptidase family M20/M25/M40 CVS48_04035 PF07687 Peptidase dimerisation domain CVS48_04040 PF14602 Hexapeptide repeat of succinyl-transferase CVS48_04040 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle CVS48_04050 PF01380 SIS domain CVS48_04055 PF01212 Beta-eliminating lyase CVS48_04060 PF12852 Cupin CVS48_04060 PF12833 Helix-turn-helix domain CVS48_04065 PF13361 UvrD-like helicase C-terminal domain CVS48_04065 PF00580 UvrD/REP helicase N-terminal domain CVS48_04070 PF00271 Helicase conserved C-terminal domain CVS48_04070 PF00270 DEAD/DEAH box helicase CVS48_04070 PF18074 Primosomal protein N C-terminal domain CVS48_04070 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CVS48_04070 PF17764 3′ DNA-binding domain (3′BD) CVS48_04075 PF01208 Uroporphyrinogen decarboxylase (URO-D) CVS48_04085 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CVS48_04090 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CVS48_04090 PF02874 ATP synthase alpha/beta family, beta-barrel domain CVS48_04095 PF00231 ATP synthase CVS48_04100 PF02874 ATP synthase alpha/beta family, beta-barrel domain CVS48_04100 PF00306 ATP synthase alpha/beta chain, C terminal domain CVS48_04100 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CVS48_04105 PF00213 ATP synthase delta (OSCP) subunit CVS48_04110 PF00430 ATP synthase B/B' CF(0) CVS48_04115 PF00137 ATP synthase subunit C CVS48_04120 PF00119 ATP synthase A chain CVS48_04135 PF00378 Enoyl-CoA hydratase/isomerase CVS48_04140 PF13180 PDZ domain CVS48_04150 PF13953 PapC C-terminal domain CVS48_04150 PF00577 Outer membrane usher protein CVS48_04150 PF13954 PapC N-terminal domain CVS48_04155 PF02753 Pili assembly chaperone PapD, C-terminal domain CVS48_04155 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CVS48_04160 PF16970 Type-1 fimbrial protein, A CVS48_04165 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_04170 PF01144 Coenzyme A transferase CVS48_04175 PF01144 Coenzyme A transferase CVS48_04180 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_04185 PF07992 Pyridine nucleotide-disulphide oxidoreductase CVS48_04195 PF01171 PP-loop family CVS48_04200 PF01842 ACT domain CVS48_04200 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CVS48_04200 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CVS48_04205 PF13098 Thioredoxin-like domain CVS48_04205 PF10411 Disulfide bond isomerase protein N-terminus CVS48_04210 PF01494 FAD binding domain CVS48_04215 PF06725 3D domain CVS48_04215 PF03562 MltA specific insert domain CVS48_04220 PF04379 ApaG domain CVS48_04230 PF13419 Haloacid dehalogenase-like hydrolase CVS48_04235 PF04715 Anthranilate synthase component I, N terminal region CVS48_04235 PF00425 chorismate binding enzyme CVS48_04240 PF00117 Glutamine amidotransferase class-I CVS48_04245 PF02885 Glycosyl transferase family, helical bundle domain CVS48_04245 PF00591 Glycosyl transferase family, a/b domain CVS48_04250 PF00218 Indole-3-glycerol phosphate synthase CVS48_04255 PF00158 Sigma-54 interaction domain CVS48_04255 PF02954 Bacterial regulatory protein, Fis family CVS48_04255 PF01590 GAF domain CVS48_04260 PF00171 Aldehyde dehydrogenase family CVS48_04270 PF01323 DSBA-like thioredoxin domain CVS48_04280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_04280 PF03466 LysR substrate binding domain CVS48_04285 PF00586 AIR synthase related protein, N-terminal domain CVS48_04285 PF02769 AIR synthase related protein, C-terminal domain CVS48_04290 PF01841 Transglutaminase-like superfamily CVS48_04300 PF00009 Elongation factor Tu GTP binding domain CVS48_04300 PF03144 Elongation factor Tu domain 2 CVS48_04300 PF09106 Elongation factor SelB, winged helix CVS48_04300 PF09107 Elongation factor SelB, winged helix CVS48_04305 PF12390 Selenocysteine synthase N terminal CVS48_04305 PF03841 L-seryl-tRNA selenium transferase CVS48_04310 PF04216 Protein involved in formate dehydrogenase formation CVS48_04315 PF01292 Prokaryotic cytochrome b561 CVS48_04320 PF09163 Formate dehydrogenase N, transmembrane CVS48_04320 PF12800 4Fe-4S binding domain CVS48_04320 PF13247 4Fe-4S dicluster domain CVS48_04325 PF01568 Molydopterin dinucleotide binding domain CVS48_04325 PF00384 Molybdopterin oxidoreductase CVS48_04325 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CVS48_04330 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CVS48_04330 PF01568 Molydopterin dinucleotide binding domain CVS48_04330 PF00384 Molybdopterin oxidoreductase CVS48_04340 PF03061 Thioesterase superfamily CVS48_04365 PF11737 Protein of unknown function (DUF3300) CVS48_04370 PF00582 Universal stress protein family CVS48_04375 PF00111 2Fe-2S iron-sulfur cluster binding domain CVS48_04375 PF00970 Oxidoreductase FAD-binding domain CVS48_04375 PF00175 Oxidoreductase NAD-binding domain CVS48_04385 PF00171 Aldehyde dehydrogenase family CVS48_04400 PF07729 FCD domain CVS48_04400 PF00392 Bacterial regulatory proteins, gntR family CVS48_04440 PF07690 Major Facilitator Superfamily CVS48_04445 PF02203 Tar ligand binding domain homologue CVS48_04445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CVS48_04445 PF00672 HAMP domain CVS48_04450 PF01979 Amidohydrolase family CVS48_04455 PF00324 Amino acid permease CVS48_04460 PF00221 Aromatic amino acid lyase CVS48_04465 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CVS48_04470 PF01175 Urocanase Rossmann-like domain CVS48_04470 PF17391 Urocanase N-terminal domain CVS48_04470 PF17392 Urocanase C-terminal domain CVS48_04475 PF05962 HutD CVS48_04480 PF07702 UTRA domain CVS48_04480 PF00392 Bacterial regulatory proteins, gntR family CVS48_04485 PF02583 Metal-sensitive transcriptional repressor CVS48_04490 PF08240 Alcohol dehydrogenase GroES-like domain CVS48_04490 PF00107 Zinc-binding dehydrogenase CVS48_04500 PF08323 Starch synthase catalytic domain CVS48_04500 PF00534 Glycosyl transferases group 1 CVS48_04510 PF00491 Arginase family CVS48_04515 PF00474 Sodium:solute symporter family CVS48_04520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_04520 PF03466 LysR substrate binding domain CVS48_04525 PF01926 50S ribosome-binding GTPase CVS48_04530 PF08448 PAS fold CVS48_04530 PF08447 PAS fold CVS48_04530 PF00990 Diguanylate cyclase, GGDEF domain CVS48_04530 PF00563 EAL domain CVS48_04540 PF02423 Ornithine cyclodeaminase/mu-crystallin family CVS48_04545 PF01037 Lrp/AsnC ligand binding domain CVS48_04580 PF06532 Negative regulator of sigma F CVS48_04585 PF08281 Sigma-70, region 4 CVS48_04585 PF04542 Sigma-70 region 2 CVS48_04590 PF00563 EAL domain CVS48_04590 PF00990 Diguanylate cyclase, GGDEF domain CVS48_04590 PF13188 PAS domain CVS48_04590 PF03707 Bacterial signalling protein N terminal repeat CVS48_04595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_04595 PF03466 LysR substrate binding domain CVS48_04600 PF07690 Major Facilitator Superfamily CVS48_04610 PF03466 LysR substrate binding domain CVS48_04610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_04615 PF00248 Aldo/keto reductase family CVS48_04620 PF03466 LysR substrate binding domain CVS48_04620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_04625 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_04630 PF01425 Amidase CVS48_04635 PF00384 Molybdopterin oxidoreductase CVS48_04645 PF00144 Beta-lactamase CVS48_04655 PF00144 Beta-lactamase CVS48_04665 PF02627 Carboxymuconolactone decarboxylase family CVS48_04670 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_04680 PF02515 CoA-transferase family III CVS48_04685 PF03328 HpcH/HpaI aldolase/citrate lyase family CVS48_04690 PF03466 LysR substrate binding domain CVS48_04690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_04695 PF00544 Pectate lyase CVS48_04725 PF00534 Glycosyl transferases group 1 CVS48_04735 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CVS48_04735 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CVS48_04735 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CVS48_04755 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CVS48_04755 PF07992 Pyridine nucleotide-disulphide oxidoreductase CVS48_04760 PF01042 Endoribonuclease L-PSP CVS48_04765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_04765 PF03466 LysR substrate binding domain CVS48_04790 PF03069 Acetamidase/Formamidase family CVS48_04795 PF00005 ABC transporter CVS48_04800 PF00005 ABC transporter CVS48_04800 PF12399 Branched-chain amino acid ATP-binding cassette transporter CVS48_04810 PF02653 Branched-chain amino acid transport system / permease component CVS48_04810 PF11862 Domain of unknown function (DUF3382) CVS48_04820 PF00497 Bacterial extracellular solute-binding proteins, family 3 CVS48_04820 PF00072 Response regulator receiver domain CVS48_04820 PF01627 Hpt domain CVS48_04820 PF00512 His Kinase A (phospho-acceptor) domain CVS48_04820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_04825 PF00072 Response regulator receiver domain CVS48_04840 PF12705 PD-(D/E)XK nuclease superfamily CVS48_04840 PF13361 UvrD-like helicase C-terminal domain CVS48_04840 PF00580 UvrD/REP helicase N-terminal domain CVS48_04870 PF01380 SIS domain CVS48_04895 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CVS48_04895 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CVS48_04895 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CVS48_04900 PF07690 Major Facilitator Superfamily CVS48_04905 PF00132 Bacterial transferase hexapeptide (six repeats) CVS48_04905 PF12804 MobA-like NTP transferase domain CVS48_04905 PF14602 Hexapeptide repeat of succinyl-transferase CVS48_04925 PF02630 SCO1/SenC CVS48_04930 PF01040 UbiA prenyltransferase family CVS48_04935 PF02628 Cytochrome oxidase assembly protein CVS48_04960 PF00510 Cytochrome c oxidase subunit III CVS48_04970 PF00115 Cytochrome C and Quinol oxidase polypeptide I CVS48_04975 PF02790 Cytochrome C oxidase subunit II, transmembrane domain CVS48_04975 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CVS48_04990 PF00149 Calcineurin-like phosphoesterase CVS48_04995 PF04545 Sigma-70, region 4 CVS48_04995 PF04542 Sigma-70 region 2 CVS48_04995 PF00140 Sigma-70 factor, region 1.2 CVS48_05005 PF00756 Putative esterase CVS48_05015 PF04898 Glutamate synthase central domain CVS48_05015 PF01493 GXGXG motif CVS48_05015 PF00310 Glutamine amidotransferases class-II CVS48_05015 PF01645 Conserved region in glutamate synthase CVS48_05020 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CVS48_05020 PF07992 Pyridine nucleotide-disulphide oxidoreductase CVS48_05025 PF03922 OmpW family CVS48_05030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_05030 PF03466 LysR substrate binding domain CVS48_05035 PF06779 Uncharacterised MFS-type transporter YbfB CVS48_05040 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_05045 PF03060 Nitronate monooxygenase CVS48_05050 PF00005 ABC transporter CVS48_05055 PF02405 Permease MlaE CVS48_05060 PF02470 MlaD protein CVS48_05065 PF04333 MlaA lipoprotein CVS48_05075 PF00005 ABC transporter CVS48_05080 PF01061 ABC-2 type transporter CVS48_05085 PF01722 BolA-like protein CVS48_05090 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CVS48_05095 PF01634 ATP phosphoribosyltransferase CVS48_05100 PF00815 Histidinol dehydrogenase CVS48_05105 PF00155 Aminotransferase class I and II CVS48_05110 PF00475 Imidazoleglycerol-phosphate dehydratase CVS48_05115 PF00117 Glutamine amidotransferase class-I CVS48_05120 PF00977 Histidine biosynthesis protein CVS48_05125 PF00977 Histidine biosynthesis protein CVS48_05130 PF01502 Phosphoribosyl-AMP cyclohydrolase CVS48_05135 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CVS48_05140 PF01230 HIT domain CVS48_05145 PF02416 mttA/Hcf106 family CVS48_05150 PF02416 mttA/Hcf106 family CVS48_05155 PF00902 Sec-independent protein translocase protein (TatC) CVS48_05165 PF13180 PDZ domain CVS48_05170 PF01784 NIF3 (NGG1p interacting factor 3) CVS48_05175 PF01741 Large-conductance mechanosensitive channel, MscL CVS48_05180 PF00355 Rieske [2Fe-2S] domain CVS48_05180 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal CVS48_05185 PF00032 Cytochrome b(C-terminal)/b6/petD CVS48_05185 PF00033 Cytochrome b/b6/petB CVS48_05190 PF02167 Cytochrome C1 family CVS48_05195 PF00043 Glutathione S-transferase, C-terminal domain CVS48_05195 PF02798 Glutathione S-transferase, N-terminal domain CVS48_05200 PF04386 Stringent starvation protein B CVS48_05205 PF04962 KduI/IolB family CVS48_05210 PF01261 Xylose isomerase-like TIM barrel CVS48_05215 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CVS48_05215 PF00205 Thiamine pyrophosphate enzyme, central domain CVS48_05215 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CVS48_05220 PF00294 pfkB family carbohydrate kinase CVS48_05225 PF00005 ABC transporter CVS48_05230 PF02653 Branched-chain amino acid transport system / permease component CVS48_05240 PF01380 SIS domain CVS48_05240 PF01418 Helix-turn-helix domain, rpiR family CVS48_05245 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CVS48_05245 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CVS48_05250 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CVS48_05250 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CVS48_05270 PF02447 GntP family permease CVS48_05275 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_05280 PF01425 Amidase CVS48_05285 PF09339 IclR helix-turn-helix domain CVS48_05285 PF01614 Bacterial transcriptional regulator CVS48_05295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_05295 PF03466 LysR substrate binding domain CVS48_05305 PF00266 Aminotransferase class-V CVS48_05310 PF00892 EamA-like transporter family CVS48_05315 PF06445 GyrI-like small molecule binding domain CVS48_05315 PF12833 Helix-turn-helix domain CVS48_05325 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CVS48_05325 PF01926 50S ribosome-binding GTPase CVS48_05330 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CVS48_05335 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_05340 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_05340 PF12911 N-terminal TM domain of oligopeptide transport permease C CVS48_05345 PF00005 ABC transporter CVS48_05345 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS48_05355 PF06097 Bacterial protein of unknown function (DUF945) CVS48_05360 PF00270 DEAD/DEAH box helicase CVS48_05360 PF00271 Helicase conserved C-terminal domain CVS48_05365 PF01810 LysE type translocator CVS48_05370 PF00009 Elongation factor Tu GTP binding domain CVS48_05370 PF03144 Elongation factor Tu domain 2 CVS48_05370 PF16658 Class II release factor RF3, C-terminal domain CVS48_05380 PF00210 Ferritin-like domain CVS48_05390 PF00309 Sigma-54 factor, Activator interacting domain (AID) CVS48_05390 PF04963 Sigma-54 factor, core binding domain CVS48_05390 PF04552 Sigma-54, DNA binding domain CVS48_05400 PF00682 HMGL-like CVS48_05400 PF08502 LeuA allosteric (dimerisation) domain CVS48_05405 PF01425 Amidase CVS48_05410 PF00356 Bacterial regulatory proteins, lacI family CVS48_05415 PF00149 Calcineurin-like phosphoesterase CVS48_05420 PF00005 ABC transporter CVS48_05420 PF17912 MalK OB fold domain CVS48_05425 PF13416 Bacterial extracellular solute-binding protein CVS48_05430 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_05435 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_05450 PF00750 tRNA synthetases class I (R) CVS48_05450 PF03485 Arginyl tRNA synthetase N terminal domain CVS48_05450 PF05746 DALR anticodon binding domain CVS48_05460 PF01323 DSBA-like thioredoxin domain CVS48_05460 PF00085 Thioredoxin CVS48_05475 PF01053 Cys/Met metabolism PLP-dependent enzyme CVS48_05480 PF00881 Nitroreductase family CVS48_05485 PF01810 LysE type translocator CVS48_05495 PF00376 MerR family regulatory protein CVS48_05495 PF09278 MerR, DNA binding CVS48_05505 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CVS48_05505 PF02770 Acyl-CoA dehydrogenase, middle domain CVS48_05505 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CVS48_05510 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) CVS48_05515 PF02803 Thiolase, C-terminal domain CVS48_05515 PF00108 Thiolase, N-terminal domain CVS48_05520 PF01039 Carboxyl transferase domain CVS48_05525 PF02785 Biotin carboxylase C-terminal domain CVS48_05525 PF00289 Biotin carboxylase, N-terminal domain CVS48_05525 PF00364 Biotin-requiring enzyme CVS48_05525 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CVS48_05535 PF01965 DJ-1/PfpI family CVS48_05540 PF00005 ABC transporter CVS48_05550 PF01970 Tripartite tricarboxylate transporter TctA family CVS48_05560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_05560 PF00989 PAS fold CVS48_05560 PF00512 His Kinase A (phospho-acceptor) domain CVS48_05565 PF02954 Bacterial regulatory protein, Fis family CVS48_05565 PF00072 Response regulator receiver domain CVS48_05565 PF00158 Sigma-54 interaction domain CVS48_05570 PF01739 CheR methyltransferase, SAM binding domain CVS48_05570 PF03705 CheR methyltransferase, all-alpha domain CVS48_05570 PF08448 PAS fold CVS48_05570 PF01339 CheB methylesterase CVS48_05580 PF01810 LysE type translocator CVS48_05585 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CVS48_05595 PF00924 Mechanosensitive ion channel CVS48_05600 PF00698 Acyl transferase domain CVS48_05600 PF00109 Beta-ketoacyl synthase, N-terminal domain CVS48_05600 PF02801 Beta-ketoacyl synthase, C-terminal domain CVS48_05600 PF08659 KR domain CVS48_05600 PF00550 Phosphopantetheine attachment site CVS48_05600 PF14765 Polyketide synthase dehydratase CVS48_05600 PF08240 Alcohol dehydrogenase GroES-like domain CVS48_05600 PF16197 Ketoacyl-synthetase C-terminal extension CVS48_05610 PF00171 Aldehyde dehydrogenase family CVS48_05615 PF03466 LysR substrate binding domain CVS48_05615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_05630 PF00106 short chain dehydrogenase CVS48_05635 PF06719 AraC-type transcriptional regulator N-terminus CVS48_05635 PF12833 Helix-turn-helix domain CVS48_05660 PF00202 Aminotransferase class-III CVS48_05665 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_05670 PF07690 Major Facilitator Superfamily CVS48_05675 PF00497 Bacterial extracellular solute-binding proteins, family 3 CVS48_05680 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_05685 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_05690 PF00005 ABC transporter CVS48_05695 PF01168 Alanine racemase, N-terminal domain CVS48_05695 PF14031 Putative serine dehydratase domain CVS48_05700 PF16868 NMT1-like family CVS48_05710 PF04361 Protein of unknown function (DUF494) CVS48_05715 PF00749 tRNA synthetases class I (E and Q), catalytic domain CVS48_05725 PF01751 Toprim domain CVS48_05725 PF01131 DNA topoisomerase CVS48_05735 PF00005 ABC transporter CVS48_05740 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_05750 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CVS48_05750 PF00205 Thiamine pyrophosphate enzyme, central domain CVS48_05750 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CVS48_05755 PF01037 Lrp/AsnC ligand binding domain CVS48_05760 PF01062 Bestrophin, RFP-TM, chloride channel CVS48_05770 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CVS48_05790 PF01613 Flavin reductase like domain CVS48_05800 PF08546 Ketopantoate reductase PanE/ApbA C terminal CVS48_05800 PF02558 Ketopantoate reductase PanE/ApbA CVS48_05830 PF07969 Amidohydrolase family CVS48_05845 PF07992 Pyridine nucleotide-disulphide oxidoreductase CVS48_05845 PF04324 BFD-like [2Fe-2S] binding domain CVS48_05855 PF01266 FAD dependent oxidoreductase CVS48_05860 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_05865 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_05870 PF00005 ABC transporter CVS48_05870 PF08402 TOBE domain CVS48_05880 PF07702 UTRA domain CVS48_05880 PF00392 Bacterial regulatory proteins, gntR family CVS48_05890 PF05378 Hydantoinase/oxoprolinase N-terminal region CVS48_05890 PF01968 Hydantoinase/oxoprolinase CVS48_05895 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_05900 PF03466 LysR substrate binding domain CVS48_05900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_05910 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CVS48_05925 PF07992 Pyridine nucleotide-disulphide oxidoreductase CVS48_05925 PF04324 BFD-like [2Fe-2S] binding domain CVS48_05935 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_05940 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_05945 PF08402 TOBE domain CVS48_05945 PF00005 ABC transporter CVS48_05955 PF01070 FMN-dependent dehydrogenase CVS48_05965 PF00708 Acylphosphatase CVS48_05970 PF00892 EamA-like transporter family CVS48_05975 PF01212 Beta-eliminating lyase CVS48_05980 PF00005 ABC transporter CVS48_05985 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_05990 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_05995 PF00497 Bacterial extracellular solute-binding proteins, family 3 CVS48_06000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_06000 PF03466 LysR substrate binding domain CVS48_06025 PF00204 DNA gyrase B CVS48_06025 PF18053 DNA gyrase B subunit insert domain CVS48_06025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_06025 PF01751 Toprim domain CVS48_06025 PF00986 DNA gyrase B subunit, carboxyl terminus CVS48_06030 PF00712 DNA polymerase III beta subunit, N-terminal domain CVS48_06030 PF02768 DNA polymerase III beta subunit, C-terminal domain CVS48_06030 PF02767 DNA polymerase III beta subunit, central domain CVS48_06035 PF08299 Bacterial dnaA protein helix-turn-helix CVS48_06035 PF00308 Bacterial dnaA protein CVS48_06035 PF11638 DnaA N-terminal domain CVS48_06040 PF00468 Ribosomal protein L34 CVS48_06045 PF00825 Ribonuclease P CVS48_06050 PF01809 Putative membrane protein insertion efficiency factor CVS48_06055 PF14849 YidC periplasmic domain CVS48_06055 PF02096 60Kd inner membrane protein CVS48_06060 PF00199 Catalase CVS48_06060 PF06628 Catalase-related immune-responsive CVS48_06065 PF01546 Peptidase family M20/M25/M40 CVS48_06065 PF07687 Peptidase dimerisation domain CVS48_06070 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS48_06070 PF00005 ABC transporter CVS48_06075 PF00005 ABC transporter CVS48_06075 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS48_06080 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_06080 PF12911 N-terminal TM domain of oligopeptide transport permease C CVS48_06085 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_06090 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CVS48_06095 PF01926 50S ribosome-binding GTPase CVS48_06095 PF12631 MnmE helical domain CVS48_06095 PF10396 GTP-binding protein TrmE N-terminus CVS48_06100 PF00583 Acetyltransferase (GNAT) family CVS48_06105 PF00654 Voltage gated chloride channel CVS48_06110 PF00072 Response regulator receiver domain CVS48_06110 PF00486 Transcriptional regulatory protein, C terminal CVS48_06115 PF00672 HAMP domain CVS48_06115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_06115 PF00512 His Kinase A (phospho-acceptor) domain CVS48_06130 PF01970 Tripartite tricarboxylate transporter TctA family CVS48_06135 PF00155 Aminotransferase class I and II CVS48_06140 PF05145 Transition state regulatory protein AbrB CVS48_06145 PF00313 'Cold-shock' DNA-binding domain CVS48_06150 PF01134 Glucose inhibited division protein A CVS48_06150 PF13932 GidA associated domain CVS48_06155 PF02527 rRNA small subunit methyltransferase G CVS48_06160 PF13614 AAA domain CVS48_06170 PF17762 HTH domain found in ParB protein CVS48_06170 PF02195 ParB-like nuclease domain CVS48_06175 PF17763 Glutaminase/Asparaginase C-terminal domain CVS48_06175 PF00710 Asparaginase, N-terminal CVS48_06180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_06180 PF03466 LysR substrate binding domain CVS48_06200 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_06205 PF00120 Glutamine synthetase, catalytic domain CVS48_06210 PF00171 Aldehyde dehydrogenase family CVS48_06215 PF00465 Iron-containing alcohol dehydrogenase CVS48_06235 PF00009 Elongation factor Tu GTP binding domain CVS48_06235 PF03144 Elongation factor Tu domain 2 CVS48_06235 PF03143 Elongation factor Tu C-terminal domain CVS48_06250 PF00467 KOW motif CVS48_06250 PF02357 Transcription termination factor nusG CVS48_06255 PF03946 Ribosomal protein L11, N-terminal domain CVS48_06255 PF00298 Ribosomal protein L11, RNA binding domain CVS48_06260 PF00687 Ribosomal protein L1p/L10e family CVS48_06265 PF00466 Ribosomal protein L10 CVS48_06270 PF16320 Ribosomal protein L7/L12 dimerisation domain CVS48_06270 PF00542 Ribosomal protein L7/L12 C-terminal domain CVS48_06275 PF04560 RNA polymerase Rpb2, domain 7 CVS48_06275 PF04561 RNA polymerase Rpb2, domain 2 CVS48_06275 PF00562 RNA polymerase Rpb2, domain 6 CVS48_06275 PF10385 RNA polymerase beta subunit external 1 domain CVS48_06275 PF04565 RNA polymerase Rpb2, domain 3 CVS48_06275 PF04563 RNA polymerase beta subunit CVS48_06280 PF04983 RNA polymerase Rpb1, domain 3 CVS48_06280 PF05000 RNA polymerase Rpb1, domain 4 CVS48_06280 PF04997 RNA polymerase Rpb1, domain 1 CVS48_06280 PF00623 RNA polymerase Rpb1, domain 2 CVS48_06280 PF04998 RNA polymerase Rpb1, domain 5 CVS48_06310 PF00486 Transcriptional regulatory protein, C terminal CVS48_06310 PF00072 Response regulator receiver domain CVS48_06315 PF00072 Response regulator receiver domain CVS48_06315 PF00486 Transcriptional regulatory protein, C terminal CVS48_06320 PF00164 Ribosomal protein S12/S23 CVS48_06325 PF00177 Ribosomal protein S7p/S5e CVS48_06330 PF00679 Elongation factor G C-terminus CVS48_06330 PF03764 Elongation factor G, domain IV CVS48_06330 PF03144 Elongation factor Tu domain 2 CVS48_06330 PF00009 Elongation factor Tu GTP binding domain CVS48_06330 PF14492 Elongation Factor G, domain II CVS48_06335 PF03144 Elongation factor Tu domain 2 CVS48_06335 PF03143 Elongation factor Tu C-terminal domain CVS48_06335 PF00009 Elongation factor Tu GTP binding domain CVS48_06340 PF00338 Ribosomal protein S10p/S20e CVS48_06345 PF01958 Domain of unknown function DUF108 CVS48_06345 PF03447 Homoserine dehydrogenase, NAD binding domain CVS48_06350 PF01614 Bacterial transcriptional regulator CVS48_06350 PF09339 IclR helix-turn-helix domain CVS48_06355 PF12697 Alpha/beta hydrolase family CVS48_06360 PF13609 Gram-negative porin CVS48_06375 PF00005 ABC transporter CVS48_06380 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_06385 PF00297 Ribosomal protein L3 CVS48_06390 PF00573 Ribosomal protein L4/L1 family CVS48_06395 PF00276 Ribosomal protein L23 CVS48_06400 PF00181 Ribosomal Proteins L2, RNA binding domain CVS48_06400 PF03947 Ribosomal Proteins L2, C-terminal domain CVS48_06405 PF00203 Ribosomal protein S19 CVS48_06410 PF00237 Ribosomal protein L22p/L17e CVS48_06415 PF07650 KH domain CVS48_06415 PF00189 Ribosomal protein S3, C-terminal domain CVS48_06420 PF00252 Ribosomal protein L16p/L10e CVS48_06425 PF00831 Ribosomal L29 protein CVS48_06430 PF00366 Ribosomal protein S17 CVS48_06450 PF11862 Domain of unknown function (DUF3382) CVS48_06450 PF02653 Branched-chain amino acid transport system / permease component CVS48_06455 PF00005 ABC transporter CVS48_06460 PF00005 ABC transporter CVS48_06460 PF12399 Branched-chain amino acid ATP-binding cassette transporter CVS48_06475 PF14525 AraC-binding-like domain CVS48_06475 PF12833 Helix-turn-helix domain CVS48_06480 PF00171 Aldehyde dehydrogenase family CVS48_06490 PF00238 Ribosomal protein L14p/L23e CVS48_06495 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CVS48_06500 PF00281 Ribosomal protein L5 CVS48_06500 PF00673 ribosomal L5P family C-terminus CVS48_06505 PF00253 Ribosomal protein S14p/S29e CVS48_06510 PF00410 Ribosomal protein S8 CVS48_06515 PF00347 Ribosomal protein L6 CVS48_06520 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CVS48_06525 PF03719 Ribosomal protein S5, C-terminal domain CVS48_06525 PF00333 Ribosomal protein S5, N-terminal domain CVS48_06530 PF00327 Ribosomal protein L30p/L7e CVS48_06535 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CVS48_06540 PF00344 SecY translocase CVS48_06545 PF01176 Translation initiation factor 1A / IF-1 CVS48_06550 PF00444 Ribosomal protein L36 CVS48_06555 PF00416 Ribosomal protein S13/S18 CVS48_06560 PF00411 Ribosomal protein S11 CVS48_06565 PF00163 Ribosomal protein S4/S9 N-terminal domain CVS48_06565 PF01479 S4 domain CVS48_06570 PF01000 RNA polymerase Rpb3/RpoA insert domain CVS48_06570 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CVS48_06570 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CVS48_06575 PF01196 Ribosomal protein L17 CVS48_06580 PF01230 HIT domain CVS48_06585 PF03091 CutA1 divalent ion tolerance protein CVS48_06590 PF02683 Cytochrome C biogenesis protein transmembrane region CVS48_06590 PF11412 Disulphide bond corrector protein DsbC CVS48_06600 PF00490 Delta-aminolevulinic acid dehydratase CVS48_06605 PF01926 50S ribosome-binding GTPase CVS48_06615 PF05140 ResB-like family CVS48_06620 PF01578 Cytochrome C assembly protein CVS48_06645 PF04717 Type VI secretion system, phage-baseplate injector CVS48_06695 PF10431 C-terminal, D2-small domain, of ClpB protein CVS48_06695 PF17871 AAA lid domain CVS48_06695 PF07724 AAA domain (Cdc48 subfamily) CVS48_06695 PF00004 ATPase family associated with various cellular activities (AAA) CVS48_06720 PF13677 Membrane MotB of proton-channel complex MotA/MotB CVS48_06720 PF00691 OmpA family CVS48_06740 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CVS48_06740 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CVS48_06750 PF01491 Frataxin-like domain CVS48_06755 PF17092 Penicillin-binding protein OB-like domain CVS48_06755 PF00912 Transglycosylase CVS48_06755 PF00905 Penicillin binding protein transpeptidase domain CVS48_06760 PF01202 Shikimate kinase CVS48_06765 PF01761 3-dehydroquinate synthase CVS48_06770 PF13286 Phosphohydrolase-associated domain CVS48_06770 PF01966 HD domain CVS48_06775 PF13417 Glutathione S-transferase, N-terminal domain CVS48_06775 PF00043 Glutathione S-transferase, C-terminal domain CVS48_06780 PF17760 UvrA interaction domain CVS48_06780 PF17755 UvrA DNA-binding domain CVS48_06785 PF07690 Major Facilitator Superfamily CVS48_06790 PF00436 Single-strand binding protein family CVS48_06795 PF05860 haemagglutination activity domain CVS48_06800 PF05860 haemagglutination activity domain CVS48_06805 PF05860 haemagglutination activity domain CVS48_06810 PF05860 haemagglutination activity domain CVS48_06815 PF03466 LysR substrate binding domain CVS48_06815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_06820 PF13378 Enolase C-terminal domain-like CVS48_06825 PF00593 TonB dependent receptor CVS48_06825 PF07715 TonB-dependent Receptor Plug Domain CVS48_06830 PF12833 Helix-turn-helix domain CVS48_06830 PF14525 AraC-binding-like domain CVS48_06835 PF08241 Methyltransferase domain CVS48_06865 PF01274 Malate synthase CVS48_06870 PF07729 FCD domain CVS48_06870 PF00392 Bacterial regulatory proteins, gntR family CVS48_06890 PF01040 UbiA prenyltransferase family CVS48_06895 PF00155 Aminotransferase class I and II CVS48_06900 PF13185 GAF domain CVS48_06905 PF00701 Dihydrodipicolinate synthetase family CVS48_06920 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CVS48_06920 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CVS48_06945 PF01336 OB-fold nucleic acid binding domain CVS48_06945 PF02938 GAD domain CVS48_06945 PF00152 tRNA synthetases class II (D, K and N) CVS48_06950 PF03372 Endonuclease/Exonuclease/phosphatase family CVS48_06955 PF13091 PLD-like domain CVS48_06965 PF07690 Major Facilitator Superfamily CVS48_06970 PF00692 dUTPase CVS48_06975 PF16363 GDP-mannose 4,6 dehydratase CVS48_06980 PF04321 RmlD substrate binding domain CVS48_06985 PF00483 Nucleotidyl transferase CVS48_06990 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CVS48_06995 PF00953 Glycosyl transferase family 4 CVS48_07030 PF08239 Bacterial SH3 domain CVS48_07030 PF00005 ABC transporter CVS48_07045 PF00202 Aminotransferase class-III CVS48_07055 PF02348 Cytidylyltransferase CVS48_07065 PF00483 Nucleotidyl transferase CVS48_07075 PF03102 NeuB family CVS48_07075 PF08666 SAF domain CVS48_07080 PF02350 UDP-N-acetylglucosamine 2-epimerase CVS48_07085 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CVS48_07090 PF16363 GDP-mannose 4,6 dehydratase CVS48_07095 PF02719 Polysaccharide biosynthesis protein CVS48_07110 PF00534 Glycosyl transferases group 1 CVS48_07110 PF00862 Sucrose synthase CVS48_07115 PF02397 Bacterial sugar transferase CVS48_07120 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CVS48_07130 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CVS48_07135 PF00132 Bacterial transferase hexapeptide (six repeats) CVS48_07140 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CVS48_07140 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CVS48_07145 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CVS48_07150 PF00534 Glycosyl transferases group 1 CVS48_07150 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CVS48_07160 PF03309 Type III pantothenate kinase CVS48_07170 PF02405 Permease MlaE CVS48_07175 PF00005 ABC transporter CVS48_07195 PF07943 Penicillin-binding protein 5, C-terminal domain CVS48_07195 PF00768 D-alanyl-D-alanine carboxypeptidase CVS48_07200 PF01063 Amino-transferase class IV CVS48_07205 PF04359 Protein of unknown function (DUF493) CVS48_07210 PF03099 Biotin/lipoate A/B protein ligase family CVS48_07220 PF00356 Bacterial regulatory proteins, lacI family CVS48_07225 PF04055 Radical SAM superfamily CVS48_07225 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CVS48_07230 PF01923 Cobalamin adenosyltransferase CVS48_07240 PF00004 ATPase family associated with various cellular activities (AAA) CVS48_07240 PF07724 AAA domain (Cdc48 subfamily) CVS48_07245 PF00227 Proteasome subunit CVS48_07250 PF01258 Prokaryotic dksA/traR C4-type zinc finger CVS48_07255 PF02492 CobW/HypB/UreG, nucleotide-binding domain CVS48_07255 PF07683 Cobalamin synthesis protein cobW C-terminal domain CVS48_07260 PF01475 Ferric uptake regulator family CVS48_07265 PF00005 ABC transporter CVS48_07270 PF00950 ABC 3 transport family CVS48_07275 PF01297 Zinc-uptake complex component A periplasmic CVS48_07285 PF03824 High-affinity nickel-transport protein CVS48_07290 PF00589 Phage integrase family CVS48_07290 PF02899 Phage integrase, N-terminal SAM-like domain CVS48_07300 PF01678 Diaminopimelate epimerase CVS48_07305 PF03279 Bacterial lipid A biosynthesis acyltransferase CVS48_07315 PF02773 S-adenosylmethionine synthetase, C-terminal domain CVS48_07315 PF02772 S-adenosylmethionine synthetase, central domain CVS48_07315 PF00438 S-adenosylmethionine synthetase, N-terminal domain CVS48_07320 PF01425 Amidase CVS48_07325 PF00083 Sugar (and other) transporter CVS48_07335 PF00005 ABC transporter CVS48_07345 PF13458 Periplasmic binding protein CVS48_07360 PF01613 Flavin reductase like domain CVS48_07375 PF03466 LysR substrate binding domain CVS48_07375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_07380 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_07385 PF00330 Aconitase family (aconitate hydratase) CVS48_07390 PF00694 Aconitase C-terminal domain CVS48_07395 PF00561 alpha/beta hydrolase fold CVS48_07405 PF00534 Glycosyl transferases group 1 CVS48_07405 PF13439 Glycosyltransferase Family 4 CVS48_07410 PF05221 S-adenosyl-L-homocysteine hydrolase CVS48_07410 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CVS48_07415 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV CVS48_07420 PF02219 Methylenetetrahydrofolate reductase CVS48_07425 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_07435 PF08379 Bacterial transglutaminase-like N-terminal region CVS48_07435 PF01841 Transglutaminase-like superfamily CVS48_07445 PF14403 Circularly permuted ATP-grasp type 2 CVS48_07455 PF14718 Soluble lytic murein transglycosylase L domain CVS48_07455 PF01464 Transglycosylase SLT domain CVS48_07460 PF01743 Poly A polymerase head domain CVS48_07460 PF12627 Probable RNA and SrmB- binding site of polymerase A CVS48_07470 PF00270 DEAD/DEAH box helicase CVS48_07470 PF00271 Helicase conserved C-terminal domain CVS48_07475 PF03167 Uracil DNA glycosylase superfamily CVS48_07480 PF06965 Na+/H+ antiporter 1 CVS48_07490 PF00534 Glycosyl transferases group 1 CVS48_07490 PF13477 Glycosyl transferase 4-like CVS48_07505 PF03976 Polyphosphate kinase 2 (PPK2) CVS48_07510 PF00753 Metallo-beta-lactamase superfamily CVS48_07520 PF04143 Sulphur transport CVS48_07530 PF00501 AMP-binding enzyme CVS48_07530 PF14535 AMP-binding enzyme C-terminal domain CVS48_07535 PF00005 ABC transporter CVS48_07550 PF02653 Branched-chain amino acid transport system / permease component CVS48_07555 PF00005 ABC transporter CVS48_07555 PF12399 Branched-chain amino acid ATP-binding cassette transporter CVS48_07560 PF00501 AMP-binding enzyme CVS48_07570 PF01047 MarR family CVS48_07575 PF02566 OsmC-like protein CVS48_07585 PF03466 LysR substrate binding domain CVS48_07585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_07595 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CVS48_07595 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CVS48_07600 PF03372 Endonuclease/Exonuclease/phosphatase family CVS48_07605 PF00156 Phosphoribosyl transferase domain CVS48_07615 PF02637 GatB domain CVS48_07615 PF02934 GatB/GatE catalytic domain CVS48_07620 PF01425 Amidase CVS48_07625 PF02686 Glu-tRNAGln amidotransferase C subunit CVS48_07635 PF04085 rod shape-determining protein MreC CVS48_07645 PF00905 Penicillin binding protein transpeptidase domain CVS48_07645 PF03717 Penicillin-binding Protein dimerisation domain CVS48_07650 PF01098 Cell cycle protein CVS48_07655 PF02615 Malate/L-lactate dehydrogenase CVS48_07660 PF00939 Sodium:sulfate symporter transmembrane region CVS48_07665 PF00440 Bacterial regulatory proteins, tetR family CVS48_07675 PF00696 Amino acid kinase family CVS48_07680 PF03180 NLPA lipoprotein CVS48_07685 PF00578 AhpC/TSA family CVS48_07690 PF04972 BON domain CVS48_07695 PF13580 SIS domain CVS48_07700 PF02021 Uncharacterised protein family UPF0102 CVS48_07705 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CVS48_07710 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CVS48_07710 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CVS48_07715 PF03330 Lytic transglycolase CVS48_07715 PF05036 Sporulation related domain CVS48_07720 PF03668 P-loop ATPase protein family CVS48_07730 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CVS48_07730 PF00034 Cytochrome c CVS48_07735 PF00155 Aminotransferase class I and II CVS48_07735 PF00392 Bacterial regulatory proteins, gntR family CVS48_07740 PF02603 HPr Serine kinase N terminus CVS48_07740 PF07475 HPr Serine kinase C-terminal domain CVS48_07745 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CVS48_07750 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CVS48_07755 PF00005 ABC transporter CVS48_07775 PF01380 SIS domain CVS48_07775 PF00571 CBS domain CVS48_07780 PF02222 ATP-grasp domain CVS48_07790 PF01654 Cytochrome bd terminal oxidase subunit I CVS48_07795 PF02322 Cytochrome bd terminal oxidase subunit II CVS48_07800 PF08173 Membrane bound YbgT-like protein CVS48_07805 PF00664 ABC transporter transmembrane region CVS48_07805 PF00005 ABC transporter CVS48_07810 PF00664 ABC transporter transmembrane region CVS48_07810 PF00005 ABC transporter CVS48_07815 PF00156 Phosphoribosyl transferase domain CVS48_07820 PF03466 LysR substrate binding domain CVS48_07820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_07830 PF13609 Gram-negative porin CVS48_07835 PF00585 C-terminal regulatory domain of Threonine dehydratase CVS48_07835 PF00291 Pyridoxal-phosphate dependent enzyme CVS48_07840 PF09335 SNARE associated Golgi protein CVS48_07850 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_07855 PF01168 Alanine racemase, N-terminal domain CVS48_07860 PF00155 Aminotransferase class I and II CVS48_07865 PF00497 Bacterial extracellular solute-binding proteins, family 3 CVS48_07875 PF00682 HMGL-like CVS48_07880 PF02481 DNA recombination-mediator protein A CVS48_07880 PF17782 DprA winged helix domain CVS48_07885 PF01327 Polypeptide deformylase CVS48_07890 PF00551 Formyl transferase CVS48_07890 PF02911 Formyl transferase, C-terminal domain CVS48_07905 PF13419 Haloacid dehalogenase-like hydrolase CVS48_07915 PF03641 Possible lysine decarboxylase CVS48_07925 PF18693 TRAM domain CVS48_07925 PF00919 Uncharacterized protein family UPF0004 CVS48_07925 PF04055 Radical SAM superfamily CVS48_07930 PF01810 LysE type translocator CVS48_07935 PF01029 NusB family CVS48_07935 PF01189 16S rRNA methyltransferase RsmB/F CVS48_07945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_07945 PF00512 His Kinase A (phospho-acceptor) domain CVS48_07945 PF00989 PAS fold CVS48_07945 PF00672 HAMP domain CVS48_07950 PF00158 Sigma-54 interaction domain CVS48_07950 PF02954 Bacterial regulatory protein, Fis family CVS48_07950 PF00072 Response regulator receiver domain CVS48_07955 PF02254 TrkA-N domain CVS48_07955 PF02080 TrkA-C domain CVS48_07960 PF02386 Cation transport protein CVS48_07965 PF04107 Glutamate-cysteine ligase family 2(GCS2) CVS48_07970 PF08241 Methyltransferase domain CVS48_07980 PF00156 Phosphoribosyl transferase domain CVS48_07985 PF00588 SpoU rRNA Methylase family CVS48_07990 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_08000 PF02556 Preprotein translocase subunit SecB CVS48_08005 PF00462 Glutaredoxin CVS48_08015 PF00300 Histidine phosphatase superfamily (branch 1) CVS48_08020 PF01551 Peptidase family M23 CVS48_08025 PF03572 Peptidase family S41 CVS48_08025 PF13180 PDZ domain CVS48_08030 PF00899 ThiF family CVS48_08035 PF00563 EAL domain CVS48_08035 PF00990 Diguanylate cyclase, GGDEF domain CVS48_08035 PF03707 Bacterial signalling protein N terminal repeat CVS48_08040 PF00392 Bacterial regulatory proteins, gntR family CVS48_08040 PF07729 FCD domain CVS48_08045 PF02913 FAD linked oxidases, C-terminal domain CVS48_08045 PF01565 FAD binding domain CVS48_08050 PF13667 ThiC-associated domain CVS48_08050 PF01964 Radical SAM ThiC family CVS48_08055 PF02355 Protein export membrane protein CVS48_08055 PF07549 SecD/SecF GG Motif CVS48_08070 PF00696 Amino acid kinase family CVS48_08070 PF01472 PUA domain CVS48_08075 PF01018 GTP1/OBG CVS48_08075 PF01926 50S ribosome-binding GTPase CVS48_08080 PF01016 Ribosomal L27 protein CVS48_08085 PF00829 Ribosomal prokaryotic L21 protein CVS48_08090 PF01614 Bacterial transcriptional regulator CVS48_08090 PF09339 IclR helix-turn-helix domain CVS48_08100 PF00348 Polyprenyl synthetase CVS48_08110 PF10609 NUBPL iron-transfer P-loop NTPase CVS48_08165 PF01751 Toprim domain CVS48_08165 PF01131 DNA topoisomerase CVS48_08180 PF00589 Phage integrase family CVS48_08180 PF02899 Phage integrase, N-terminal SAM-like domain CVS48_08185 PF03824 High-affinity nickel-transport protein CVS48_08200 PF13462 Thioredoxin CVS48_08205 PF02600 Disulfide bond formation protein DsbB CVS48_08240 PF13609 Gram-negative porin CVS48_08245 PF00486 Transcriptional regulatory protein, C terminal CVS48_08245 PF00072 Response regulator receiver domain CVS48_08250 PF00512 His Kinase A (phospho-acceptor) domain CVS48_08250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_08250 PF00672 HAMP domain CVS48_08255 PF00486 Transcriptional regulatory protein, C terminal CVS48_08255 PF00072 Response regulator receiver domain CVS48_08260 PF02321 Outer membrane efflux protein CVS48_08265 PF00529 HlyD membrane-fusion protein of T1SS CVS48_08265 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CVS48_08270 PF00873 AcrB/AcrD/AcrF family CVS48_08275 PF00535 Glycosyl transferase family 2 CVS48_08280 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase CVS48_08290 PF00289 Biotin carboxylase, N-terminal domain CVS48_08290 PF02785 Biotin carboxylase C-terminal domain CVS48_08290 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CVS48_08330 PF05433 Glycine zipper 2TM domain CVS48_08375 PF00437 Type II/IV secretion system protein CVS48_08400 PF03743 Bacterial conjugation TrbI-like protein CVS48_08435 PF03135 CagE, TrbE, VirB family, component of type IV transporter system CVS48_08450 PF00437 Type II/IV secretion system protein CVS48_08455 PF01464 Transglycosylase SLT domain CVS48_08485 PF02899 Phage integrase, N-terminal SAM-like domain CVS48_08485 PF00589 Phage integrase family CVS48_08530 PF16671 Actin cross-linking domain CVS48_08530 PF04717 Type VI secretion system, phage-baseplate injector CVS48_08535 PF07724 AAA domain (Cdc48 subfamily) CVS48_08535 PF00004 ATPase family associated with various cellular activities (AAA) CVS48_08535 PF17871 AAA lid domain CVS48_08535 PF10431 C-terminal, D2-small domain, of ClpB protein CVS48_08555 PF05638 Type VI secretion system effector, Hcp CVS48_08580 PF00916 Sulfate permease family CVS48_08580 PF01740 STAS domain CVS48_08585 PF00665 Integrase core domain CVS48_08595 PF02469 Fasciclin domain CVS48_08600 PF02310 B12 binding domain CVS48_08600 PF02607 B12 binding domain CVS48_08600 PF13411 MerR HTH family regulatory protein CVS48_08615 PF00378 Enoyl-CoA hydratase/isomerase CVS48_08620 PF00501 AMP-binding enzyme CVS48_08620 PF13193 AMP-binding enzyme C-terminal domain CVS48_08620 PF00668 Condensation domain CVS48_08620 PF07993 Male sterility protein CVS48_08620 PF00550 Phosphopantetheine attachment site CVS48_08625 PF08361 MAATS-type transcriptional repressor, C-terminal region CVS48_08625 PF00440 Bacterial regulatory proteins, tetR family CVS48_08630 PF01575 MaoC like domain CVS48_08635 PF00106 short chain dehydrogenase CVS48_08645 PF00171 Aldehyde dehydrogenase family CVS48_08650 PF00108 Thiolase, N-terminal domain CVS48_08650 PF02803 Thiolase, C-terminal domain CVS48_08705 PF00356 Bacterial regulatory proteins, lacI family CVS48_08710 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_08715 PF03328 HpcH/HpaI aldolase/citrate lyase family CVS48_08725 PF00753 Metallo-beta-lactamase superfamily CVS48_08730 PF12697 Alpha/beta hydrolase family CVS48_08730 PF08241 Methyltransferase domain CVS48_08740 PF00005 ABC transporter CVS48_08745 PF12399 Branched-chain amino acid ATP-binding cassette transporter CVS48_08745 PF00005 ABC transporter CVS48_08755 PF02653 Branched-chain amino acid transport system / permease component CVS48_08760 PF13458 Periplasmic binding protein CVS48_08765 PF02627 Carboxymuconolactone decarboxylase family CVS48_08770 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CVS48_08770 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CVS48_08775 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_08780 PF04909 Amidohydrolase CVS48_08790 PF00596 Class II Aldolase and Adducin N-terminal domain CVS48_08795 PF07690 Major Facilitator Superfamily CVS48_08800 PF01261 Xylose isomerase-like TIM barrel CVS48_08805 PF01370 NAD dependent epimerase/dehydratase family CVS48_08810 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CVS48_08810 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CVS48_08815 PF07005 Sugar-binding N-terminal domain CVS48_08815 PF17042 Nucleotide-binding C-terminal domain CVS48_08820 PF00324 Amino acid permease CVS48_08825 PF07729 FCD domain CVS48_08825 PF00392 Bacterial regulatory proteins, gntR family CVS48_08830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_08830 PF03466 LysR substrate binding domain CVS48_08835 PF07690 Major Facilitator Superfamily CVS48_08845 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_08850 PF08402 TOBE domain CVS48_08850 PF00005 ABC transporter CVS48_08855 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_08860 PF01979 Amidohydrolase family CVS48_08865 PF13382 Adenine deaminase C-terminal domain CVS48_08865 PF01979 Amidohydrolase family CVS48_08870 PF02492 CobW/HypB/UreG, nucleotide-binding domain CVS48_08870 PF07683 Cobalamin synthesis protein cobW C-terminal domain CVS48_08885 PF04221 RelB antitoxin CVS48_08895 PF00593 TonB dependent receptor CVS48_08895 PF07715 TonB-dependent Receptor Plug Domain CVS48_08905 PF02780 Transketolase, C-terminal domain CVS48_08905 PF02779 Transketolase, pyrimidine binding domain CVS48_08920 PF02817 e3 binding domain CVS48_08920 PF00364 Biotin-requiring enzyme CVS48_08920 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CVS48_08925 PF13458 Periplasmic binding protein CVS48_08935 PF00171 Aldehyde dehydrogenase family CVS48_08940 PF00732 GMC oxidoreductase CVS48_08940 PF05199 GMC oxidoreductase CVS48_08945 PF13458 Periplasmic binding protein CVS48_08950 PF02653 Branched-chain amino acid transport system / permease component CVS48_08955 PF00005 ABC transporter CVS48_08955 PF12399 Branched-chain amino acid ATP-binding cassette transporter CVS48_08960 PF00005 ABC transporter CVS48_08965 PF02515 CoA-transferase family III CVS48_08970 PF00682 HMGL-like CVS48_08975 PF01261 Xylose isomerase-like TIM barrel CVS48_08980 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_08985 PF00892 EamA-like transporter family CVS48_08995 PF01037 Lrp/AsnC ligand binding domain CVS48_09000 PF00795 Carbon-nitrogen hydrolase CVS48_09005 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CVS48_09010 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_09015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_09015 PF03466 LysR substrate binding domain CVS48_09020 PF01546 Peptidase family M20/M25/M40 CVS48_09020 PF07687 Peptidase dimerisation domain CVS48_09025 PF12794 Mechanosensitive ion channel inner membrane domain 1 CVS48_09025 PF00924 Mechanosensitive ion channel CVS48_09025 PF12795 Mechanosensitive ion channel porin domain CVS48_09040 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_09045 PF00005 ABC transporter CVS48_09075 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CVS48_09075 PF01488 Shikimate / quinate 5-dehydrogenase CVS48_09075 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CVS48_09080 PF03462 PCRF domain CVS48_09080 PF00472 RF-1 domain CVS48_09085 PF05175 Methyltransferase small domain CVS48_09085 PF17827 PrmC N-terminal domain CVS48_09090 PF00462 Glutaredoxin CVS48_09095 PF02441 Flavoprotein CVS48_09105 PF03180 NLPA lipoprotein CVS48_09120 PF13193 AMP-binding enzyme C-terminal domain CVS48_09120 PF00501 AMP-binding enzyme CVS48_09125 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_09140 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CVS48_09140 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CVS48_09145 PF03466 LysR substrate binding domain CVS48_09145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_09160 PF00043 Glutathione S-transferase, C-terminal domain CVS48_09160 PF13417 Glutathione S-transferase, N-terminal domain CVS48_09165 PF00484 Carbonic anhydrase CVS48_09185 PF00561 alpha/beta hydrolase fold CVS48_09200 PF01144 Coenzyme A transferase CVS48_09205 PF01144 Coenzyme A transferase CVS48_09210 PF09339 IclR helix-turn-helix domain CVS48_09210 PF01614 Bacterial transcriptional regulator CVS48_09220 PF02667 Short chain fatty acid transporter CVS48_09225 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CVS48_09225 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CVS48_09230 PF00311 Phosphoenolpyruvate carboxylase CVS48_09235 PF06508 Queuosine biosynthesis protein QueC CVS48_09250 PF03466 LysR substrate binding domain CVS48_09250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_09255 PF00920 Dehydratase family CVS48_09260 PF03466 LysR substrate binding domain CVS48_09260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_09265 PF00665 Integrase core domain CVS48_09270 PF07992 Pyridine nucleotide-disulphide oxidoreductase CVS48_09270 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CVS48_09275 PF02817 e3 binding domain CVS48_09275 PF00364 Biotin-requiring enzyme CVS48_09275 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CVS48_09285 PF00676 Dehydrogenase E1 component CVS48_09295 PF00005 ABC transporter CVS48_09300 PF12399 Branched-chain amino acid ATP-binding cassette transporter CVS48_09300 PF00005 ABC transporter CVS48_09310 PF02653 Branched-chain amino acid transport system / permease component CVS48_09315 PF13458 Periplasmic binding protein CVS48_09325 PF07729 FCD domain CVS48_09325 PF00392 Bacterial regulatory proteins, gntR family CVS48_09335 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) CVS48_09345 PF03975 CheD chemotactic sensory transduction CVS48_09350 PF18075 FtsX extracellular domain CVS48_09355 PF00005 ABC transporter CVS48_09360 PF00497 Bacterial extracellular solute-binding proteins, family 3 CVS48_09365 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_09370 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_09375 PF00005 ABC transporter CVS48_09380 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_09390 PF01494 FAD binding domain CVS48_09395 PF07992 Pyridine nucleotide-disulphide oxidoreductase CVS48_09395 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CVS48_09400 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_09405 PF01842 ACT domain CVS48_09405 PF00800 Prephenate dehydratase CVS48_09405 PF01817 Chorismate mutase type II CVS48_09410 PF02798 Glutathione S-transferase, N-terminal domain CVS48_09410 PF14497 Glutathione S-transferase, C-terminal domain CVS48_09415 PF01557 Fumarylacetoacetate (FAA) hydrolase family CVS48_09420 PF07883 Cupin domain CVS48_09425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_09425 PF03466 LysR substrate binding domain CVS48_09435 PF02321 Outer membrane efflux protein CVS48_09440 PF00873 AcrB/AcrD/AcrF family CVS48_09445 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CVS48_09455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_09455 PF03466 LysR substrate binding domain CVS48_09460 PF01594 AI-2E family transporter CVS48_09475 PF00872 Transposase, Mutator family CVS48_09480 PF00701 Dihydrodipicolinate synthetase family CVS48_09485 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_09490 PF08402 TOBE domain CVS48_09490 PF00005 ABC transporter CVS48_09500 PF02913 FAD linked oxidases, C-terminal domain CVS48_09500 PF01565 FAD binding domain CVS48_09505 PF03807 NADP oxidoreductase coenzyme F420-dependent CVS48_09505 PF14748 Pyrroline-5-carboxylate reductase dimerisation CVS48_09510 PF07690 Major Facilitator Superfamily CVS48_09520 PF03551 Transcriptional regulator PadR-like family CVS48_09525 PF04954 Siderophore-interacting protein CVS48_09525 PF08021 Siderophore-interacting FAD-binding domain CVS48_09530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_09530 PF03466 LysR substrate binding domain CVS48_09575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_09575 PF03466 LysR substrate binding domain CVS48_09590 PF05853 beta-keto acid cleavage enzyme CVS48_09595 PF05698 Bacterial trigger factor protein (TF) C-terminus CVS48_09600 PF00580 UvrD/REP helicase N-terminal domain CVS48_09600 PF13361 UvrD-like helicase C-terminal domain CVS48_09605 PF00497 Bacterial extracellular solute-binding proteins, family 3 CVS48_09615 PF03466 LysR substrate binding domain CVS48_09615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_09620 PF01979 Amidohydrolase family CVS48_09625 PF07690 Major Facilitator Superfamily CVS48_09635 PF00034 Cytochrome c CVS48_09635 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CVS48_09635 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CVS48_09640 PF00857 Isochorismatase family CVS48_09650 PF00561 alpha/beta hydrolase fold CVS48_09655 PF17645 Arylmalonate decarboxylase CVS48_09660 PF01494 FAD binding domain CVS48_09665 PF00111 2Fe-2S iron-sulfur cluster binding domain CVS48_09665 PF01799 [2Fe-2S] binding domain CVS48_09670 PF00034 Cytochrome c CVS48_09670 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CVS48_09670 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CVS48_09675 PF07690 Major Facilitator Superfamily CVS48_09680 PF12802 MarR family CVS48_09735 PF00860 Permease family CVS48_09740 PF00183 Hsp90 protein CVS48_09740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_09745 PF01381 Helix-turn-helix CVS48_09755 PF13607 Succinyl-CoA ligase like flavodoxin domain CVS48_09755 PF13380 CoA binding domain CVS48_09755 PF00583 Acetyltransferase (GNAT) family CVS48_09760 PF00107 Zinc-binding dehydrogenase CVS48_09760 PF08240 Alcohol dehydrogenase GroES-like domain CVS48_09765 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CVS48_09765 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CVS48_09765 PF02770 Acyl-CoA dehydrogenase, middle domain CVS48_09770 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_09780 PF09339 IclR helix-turn-helix domain CVS48_09790 PF07690 Major Facilitator Superfamily CVS48_09800 PF07690 Major Facilitator Superfamily CVS48_09805 PF13378 Enolase C-terminal domain-like CVS48_09805 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CVS48_09810 PF01081 KDPG and KHG aldolase CVS48_09820 PF09339 IclR helix-turn-helix domain CVS48_09820 PF01614 Bacterial transcriptional regulator CVS48_09825 PF13417 Glutathione S-transferase, N-terminal domain CVS48_09825 PF00043 Glutathione S-transferase, C-terminal domain CVS48_09830 PF01510 N-acetylmuramoyl-L-alanine amidase CVS48_09840 PF01578 Cytochrome C assembly protein CVS48_09845 PF02881 SRP54-type protein, helical bundle domain CVS48_09845 PF00448 SRP54-type protein, GTPase domain CVS48_09845 PF02978 Signal peptide binding domain CVS48_09850 PF01476 LysM domain CVS48_09850 PF04972 BON domain CVS48_09860 PF05690 Thiazole biosynthesis protein ThiG CVS48_09860 PF02597 ThiS family CVS48_09865 PF00561 alpha/beta hydrolase fold CVS48_09870 PF02390 Putative methyltransferase CVS48_09880 PF00392 Bacterial regulatory proteins, gntR family CVS48_09880 PF07729 FCD domain CVS48_09885 PF05544 Proline racemase CVS48_09895 PF01266 FAD dependent oxidoreductase CVS48_09900 PF05544 Proline racemase CVS48_09905 PF00701 Dihydrodipicolinate synthetase family CVS48_09915 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_09920 PF00005 ABC transporter CVS48_09940 PF07804 HipA-like C-terminal domain CVS48_09955 PF00290 Tryptophan synthase alpha chain CVS48_09960 PF00291 Pyridoxal-phosphate dependent enzyme CVS48_09975 PF05853 beta-keto acid cleavage enzyme CVS48_09990 PF00005 ABC transporter CVS48_09990 PF08402 TOBE domain CVS48_09995 PF08240 Alcohol dehydrogenase GroES-like domain CVS48_09995 PF00107 Zinc-binding dehydrogenase CVS48_10005 PF01220 Dehydroquinase class II CVS48_10010 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CVS48_10015 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_10020 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_10030 PF01042 Endoribonuclease L-PSP CVS48_10040 PF03466 LysR substrate binding domain CVS48_10040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_10045 PF12951 Passenger-associated-transport-repeat CVS48_10050 PF00206 Lyase CVS48_10050 PF14698 Argininosuccinate lyase C-terminal CVS48_10055 PF03466 LysR substrate binding domain CVS48_10055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_10065 PF01266 FAD dependent oxidoreductase CVS48_10070 PF05656 Protein of unknown function (DUF805) CVS48_10080 PF07702 UTRA domain CVS48_10080 PF00392 Bacterial regulatory proteins, gntR family CVS48_10090 PF00171 Aldehyde dehydrogenase family CVS48_10095 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_10100 PF02515 CoA-transferase family III CVS48_10110 PF00501 AMP-binding enzyme CVS48_10110 PF13193 AMP-binding enzyme C-terminal domain CVS48_10140 PF04303 PrpF protein CVS48_10145 PF00330 Aconitase family (aconitate hydratase) CVS48_10145 PF00694 Aconitase C-terminal domain CVS48_10160 PF02954 Bacterial regulatory protein, Fis family CVS48_10160 PF00158 Sigma-54 interaction domain CVS48_10160 PF01590 GAF domain CVS48_10170 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_10175 PF12697 Alpha/beta hydrolase family CVS48_10185 PF03466 LysR substrate binding domain CVS48_10185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_10190 PF00753 Metallo-beta-lactamase superfamily CVS48_10195 PF00005 ABC transporter CVS48_10215 PF02653 Branched-chain amino acid transport system / permease component CVS48_10225 PF00005 ABC transporter CVS48_10225 PF12399 Branched-chain amino acid ATP-binding cassette transporter CVS48_10230 PF00005 ABC transporter CVS48_10235 PF00171 Aldehyde dehydrogenase family CVS48_10245 PF00107 Zinc-binding dehydrogenase CVS48_10245 PF08240 Alcohol dehydrogenase GroES-like domain CVS48_10250 PF13458 Periplasmic binding protein CVS48_10285 PF00872 Transposase, Mutator family CVS48_10305 PF00067 Cytochrome P450 CVS48_10310 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_10320 PF01048 Phosphorylase superfamily CVS48_10325 PF00672 HAMP domain CVS48_10325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_10325 PF00512 His Kinase A (phospho-acceptor) domain CVS48_10330 PF00486 Transcriptional regulatory protein, C terminal CVS48_10330 PF00072 Response regulator receiver domain CVS48_10335 PF17991 Thioredoxin like C-terminal domain CVS48_10335 PF00578 AhpC/TSA family CVS48_10335 PF02683 Cytochrome C biogenesis protein transmembrane region CVS48_10340 PF17991 Thioredoxin like C-terminal domain CVS48_10340 PF00578 AhpC/TSA family CVS48_10340 PF02683 Cytochrome C biogenesis protein transmembrane region CVS48_10370 PF02798 Glutathione S-transferase, N-terminal domain CVS48_10370 PF00043 Glutathione S-transferase, C-terminal domain CVS48_10375 PF03466 LysR substrate binding domain CVS48_10375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_10380 PF03358 NADPH-dependent FMN reductase CVS48_10380 PF00890 FAD binding domain CVS48_10380 PF04205 FMN-binding domain CVS48_10390 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_10400 PF00155 Aminotransferase class I and II CVS48_10400 PF00392 Bacterial regulatory proteins, gntR family CVS48_10410 PF02322 Cytochrome bd terminal oxidase subunit II CVS48_10415 PF01654 Cytochrome bd terminal oxidase subunit I CVS48_10420 PF00392 Bacterial regulatory proteins, gntR family CVS48_10425 PF00005 ABC transporter CVS48_10430 PF00005 ABC transporter CVS48_10430 PF12399 Branched-chain amino acid ATP-binding cassette transporter CVS48_10440 PF02653 Branched-chain amino acid transport system / permease component CVS48_10460 PF00563 EAL domain CVS48_10460 PF12792 CSS motif domain associated with EAL CVS48_10465 PF07885 Ion channel CVS48_10465 PF02254 TrkA-N domain CVS48_10470 PF00072 Response regulator receiver domain CVS48_10470 PF00486 Transcriptional regulatory protein, C terminal CVS48_10505 PF01850 PIN domain CVS48_10510 PF01588 Putative tRNA binding domain CVS48_10510 PF09334 tRNA synthetases class I (M) CVS48_10520 PF10609 NUBPL iron-transfer P-loop NTPase CVS48_10535 PF00692 dUTPase CVS48_10545 PF01590 GAF domain CVS48_10545 PF00990 Diguanylate cyclase, GGDEF domain CVS48_10545 PF00563 EAL domain CVS48_10545 PF00360 Phytochrome region CVS48_10560 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CVS48_10560 PF01276 Orn/Lys/Arg decarboxylase, major domain CVS48_10560 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CVS48_10570 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CVS48_10570 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CVS48_10575 PF02535 ZIP Zinc transporter CVS48_10580 PF01571 Aminomethyltransferase folate-binding domain CVS48_10580 PF08669 Glycine cleavage T-protein C-terminal barrel domain CVS48_10585 PF01597 Glycine cleavage H-protein CVS48_10590 PF02347 Glycine cleavage system P-protein CVS48_10595 PF06097 Bacterial protein of unknown function (DUF945) CVS48_10605 PF01425 Amidase CVS48_10610 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS48_10610 PF00005 ABC transporter CVS48_10615 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_10620 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_10635 PF00171 Aldehyde dehydrogenase family CVS48_10640 PF00202 Aminotransferase class-III CVS48_10645 PF00155 Aminotransferase class I and II CVS48_10650 PF00186 Dihydrofolate reductase CVS48_10655 PF00563 EAL domain CVS48_10655 PF00990 Diguanylate cyclase, GGDEF domain CVS48_10655 PF03707 Bacterial signalling protein N terminal repeat CVS48_10660 PF00303 Thymidylate synthase CVS48_10665 PF02566 OsmC-like protein CVS48_10670 PF03232 Ubiquinone biosynthesis protein COQ7 CVS48_10675 PF00953 Glycosyl transferase family 4 CVS48_10680 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CVS48_10680 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CVS48_10680 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CVS48_10685 PF01370 NAD dependent epimerase/dehydratase family CVS48_10690 PF03023 Lipid II flippase MurJ CVS48_10695 PF13439 Glycosyltransferase Family 4 CVS48_10695 PF00534 Glycosyl transferases group 1 CVS48_10700 PF13537 Glutamine amidotransferase domain CVS48_10700 PF00733 Asparagine synthase CVS48_10705 PF00534 Glycosyl transferases group 1 CVS48_10705 PF13439 Glycosyltransferase Family 4 CVS48_10710 PF00534 Glycosyl transferases group 1 CVS48_10710 PF13439 Glycosyltransferase Family 4 CVS48_10715 PF13477 Glycosyl transferase 4-like CVS48_10715 PF00534 Glycosyl transferases group 1 CVS48_10720 PF00342 Phosphoglucose isomerase CVS48_10725 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CVS48_10725 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CVS48_10725 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CVS48_10725 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CVS48_10735 PF02913 FAD linked oxidases, C-terminal domain CVS48_10735 PF01565 FAD binding domain CVS48_10740 PF00486 Transcriptional regulatory protein, C terminal CVS48_10740 PF00072 Response regulator receiver domain CVS48_10745 PF00672 HAMP domain CVS48_10745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_10745 PF00512 His Kinase A (phospho-acceptor) domain CVS48_10755 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CVS48_10765 PF03480 Bacterial extracellular solute-binding protein, family 7 CVS48_10770 PF08450 SMP-30/Gluconolactonase/LRE-like region CVS48_10775 PF01370 NAD dependent epimerase/dehydratase family CVS48_10780 PF07729 FCD domain CVS48_10780 PF00392 Bacterial regulatory proteins, gntR family CVS48_10785 PF00884 Sulfatase CVS48_10790 PF00665 Integrase core domain CVS48_10800 PF04209 homogentisate 1,2-dioxygenase CVS48_10805 PF03466 LysR substrate binding domain CVS48_10805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_10815 PF01494 FAD binding domain CVS48_10825 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CVS48_10825 PF06827 Zinc finger found in FPG and IleRS CVS48_10825 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CVS48_10835 PF03550 Outer membrane lipoprotein LolB CVS48_10840 PF02028 BCCT, betaine/carnitine/choline family transporter CVS48_10845 PF13977 BetI-type transcriptional repressor, C-terminal CVS48_10845 PF00440 Bacterial regulatory proteins, tetR family CVS48_10850 PF00171 Aldehyde dehydrogenase family CVS48_10855 PF05199 GMC oxidoreductase CVS48_10855 PF00732 GMC oxidoreductase CVS48_10860 PF08544 GHMP kinases C terminal CVS48_10860 PF00288 GHMP kinases N terminal domain CVS48_10870 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CVS48_10870 PF14572 Phosphoribosyl synthetase-associated domain CVS48_10875 PF01386 Ribosomal L25p family CVS48_10875 PF14693 Ribosomal protein TL5, C-terminal domain CVS48_10880 PF01195 Peptidyl-tRNA hydrolase CVS48_10890 PF06071 Protein of unknown function (DUF933) CVS48_10890 PF01926 50S ribosome-binding GTPase CVS48_10895 PF17761 DUF1016 N-terminal domain CVS48_10895 PF06250 YhcG PDDEXK nuclease domain CVS48_10905 PF13683 Integrase core domain CVS48_10905 PF13276 HTH-like domain CVS48_10910 PF07690 Major Facilitator Superfamily CVS48_10925 PF03466 LysR substrate binding domain CVS48_10925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_10940 PF07690 Major Facilitator Superfamily CVS48_10955 PF03594 Benzoate membrane transport protein CVS48_10960 PF00037 4Fe-4S binding domain CVS48_10965 PF01467 Cytidylyltransferase-like CVS48_10980 PF00448 SRP54-type protein, GTPase domain CVS48_10980 PF02881 SRP54-type protein, helical bundle domain CVS48_10985 PF04185 Phosphoesterase family CVS48_10985 PF05506 Domain of unknown function (DUF756) CVS48_10995 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_11000 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_11005 PF00005 ABC transporter CVS48_11025 PF00925 GTP cyclohydrolase II CVS48_11025 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CVS48_11030 PF00885 6,7-dimethyl-8-ribityllumazine synthase CVS48_11035 PF01029 NusB family CVS48_11040 PF00586 AIR synthase related protein, N-terminal domain CVS48_11040 PF02769 AIR synthase related protein, C-terminal domain CVS48_11050 PF02464 Competence-damaged protein CVS48_11055 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CVS48_11060 PF07992 Pyridine nucleotide-disulphide oxidoreductase CVS48_11065 PF01219 Prokaryotic diacylglycerol kinase CVS48_11070 PF07729 FCD domain CVS48_11070 PF00392 Bacterial regulatory proteins, gntR family CVS48_11075 PF03480 Bacterial extracellular solute-binding protein, family 7 CVS48_11085 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CVS48_11095 PF01557 Fumarylacetoacetate (FAA) hydrolase family CVS48_11100 PF08666 SAF domain CVS48_11100 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CVS48_11105 PF01232 Mannitol dehydrogenase Rossmann domain CVS48_11105 PF08125 Mannitol dehydrogenase C-terminal domain CVS48_11110 PF02615 Malate/L-lactate dehydrogenase CVS48_11115 PF00005 ABC transporter CVS48_11120 PF00005 ABC transporter CVS48_11120 PF12399 Branched-chain amino acid ATP-binding cassette transporter CVS48_11130 PF02653 Branched-chain amino acid transport system / permease component CVS48_11145 PF06052 3-hydroxyanthranilic acid dioxygenase CVS48_11150 PF03466 LysR substrate binding domain CVS48_11150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_11160 PF00118 TCP-1/cpn60 chaperonin family CVS48_11165 PF00166 Chaperonin 10 Kd subunit CVS48_11170 PF00378 Enoyl-CoA hydratase/isomerase CVS48_11175 PF02515 CoA-transferase family III CVS48_11185 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CVS48_11185 PF02770 Acyl-CoA dehydrogenase, middle domain CVS48_11185 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CVS48_11190 PF00583 Acetyltransferase (GNAT) family CVS48_11190 PF13380 CoA binding domain CVS48_11190 PF13607 Succinyl-CoA ligase like flavodoxin domain CVS48_11195 PF00171 Aldehyde dehydrogenase family CVS48_11195 PF01575 MaoC like domain CVS48_11205 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_11210 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_11215 PF13452 N-terminal half of MaoC dehydratase CVS48_11220 PF00501 AMP-binding enzyme CVS48_11220 PF13193 AMP-binding enzyme C-terminal domain CVS48_11225 PF02770 Acyl-CoA dehydrogenase, middle domain CVS48_11225 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CVS48_11225 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CVS48_11230 PF02803 Thiolase, C-terminal domain CVS48_11230 PF00108 Thiolase, N-terminal domain CVS48_11240 PF00884 Sulfatase CVS48_11240 PF16347 Domain of unknown function (DUF4976) CVS48_11245 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_11250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_11250 PF03466 LysR substrate binding domain CVS48_11265 PF03466 LysR substrate binding domain CVS48_11265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_11290 PF12697 Alpha/beta hydrolase family CVS48_11295 PF01590 GAF domain CVS48_11295 PF00990 Diguanylate cyclase, GGDEF domain CVS48_11295 PF00360 Phytochrome region CVS48_11295 PF00563 EAL domain CVS48_11305 PF00486 Transcriptional regulatory protein, C terminal CVS48_11305 PF00072 Response regulator receiver domain CVS48_11315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_11320 PF02515 CoA-transferase family III CVS48_11325 PF08240 Alcohol dehydrogenase GroES-like domain CVS48_11325 PF00107 Zinc-binding dehydrogenase CVS48_11330 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_11345 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CVS48_11350 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CVS48_11355 PF00171 Aldehyde dehydrogenase family CVS48_11360 PF01042 Endoribonuclease L-PSP CVS48_11365 PF07859 alpha/beta hydrolase fold CVS48_11370 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_11375 PF00378 Enoyl-CoA hydratase/isomerase CVS48_11380 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_11385 PF13193 AMP-binding enzyme C-terminal domain CVS48_11385 PF00501 AMP-binding enzyme CVS48_11390 PF00378 Enoyl-CoA hydratase/isomerase CVS48_11400 PF00072 Response regulator receiver domain CVS48_11400 PF00486 Transcriptional regulatory protein, C terminal CVS48_11405 PF00672 HAMP domain CVS48_11405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_11405 PF00512 His Kinase A (phospho-acceptor) domain CVS48_11420 PF00534 Glycosyl transferases group 1 CVS48_11420 PF13439 Glycosyltransferase Family 4 CVS48_11435 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_11440 PF00205 Thiamine pyrophosphate enzyme, central domain CVS48_11440 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CVS48_11440 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CVS48_11445 PF12833 Helix-turn-helix domain CVS48_11445 PF00072 Response regulator receiver domain CVS48_11460 PF00561 alpha/beta hydrolase fold CVS48_11470 PF07690 Major Facilitator Superfamily CVS48_11470 PF00083 Sugar (and other) transporter CVS48_11480 PF00596 Class II Aldolase and Adducin N-terminal domain CVS48_11495 PF08479 POTRA domain, ShlB-type CVS48_11495 PF17287 POTRA domain CVS48_11495 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CVS48_11500 PF00072 Response regulator receiver domain CVS48_11500 PF00486 Transcriptional regulatory protein, C terminal CVS48_11505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_11505 PF00512 His Kinase A (phospho-acceptor) domain CVS48_11505 PF00497 Bacterial extracellular solute-binding proteins, family 3 CVS48_11505 PF00072 Response regulator receiver domain CVS48_11515 PF02913 FAD linked oxidases, C-terminal domain CVS48_11515 PF01565 FAD binding domain CVS48_11530 PF03466 LysR substrate binding domain CVS48_11530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_11540 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_11545 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CVS48_11545 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CVS48_11550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_11550 PF03466 LysR substrate binding domain CVS48_11565 PF08450 SMP-30/Gluconolactonase/LRE-like region CVS48_11570 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_11575 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_11580 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_11590 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CVS48_11590 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CVS48_11595 PF03737 Aldolase/RraA CVS48_11600 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_11605 PF04909 Amidohydrolase CVS48_11610 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_11615 PF09339 IclR helix-turn-helix domain CVS48_11615 PF01614 Bacterial transcriptional regulator CVS48_11620 PF01568 Molydopterin dinucleotide binding domain CVS48_11620 PF00384 Molybdopterin oxidoreductase CVS48_11625 PF00581 Rhodanese-like domain CVS48_11630 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_11635 PF00206 Lyase CVS48_11635 PF10397 Adenylosuccinate lyase C-terminus CVS48_11640 PF01565 FAD binding domain CVS48_11640 PF02913 FAD linked oxidases, C-terminal domain CVS48_11645 PF01614 Bacterial transcriptional regulator CVS48_11645 PF09339 IclR helix-turn-helix domain CVS48_11665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_11665 PF03466 LysR substrate binding domain CVS48_11670 PF00465 Iron-containing alcohol dehydrogenase CVS48_11675 PF00083 Sugar (and other) transporter CVS48_11680 PF00171 Aldehyde dehydrogenase family CVS48_11690 PF08281 Sigma-70, region 4 CVS48_11690 PF04542 Sigma-70 region 2 CVS48_11695 PF04773 FecR protein CVS48_11695 PF16220 Domain of unknown function (DUF4880) CVS48_11700 PF00593 TonB dependent receptor CVS48_11700 PF07715 TonB-dependent Receptor Plug Domain CVS48_11715 PF07715 TonB-dependent Receptor Plug Domain CVS48_11715 PF00593 TonB dependent receptor CVS48_11730 PF05368 NmrA-like family CVS48_11735 PF02566 OsmC-like protein CVS48_11740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_11740 PF03466 LysR substrate binding domain CVS48_11750 PF04542 Sigma-70 region 2 CVS48_11750 PF12680 SnoaL-like domain CVS48_11750 PF08281 Sigma-70, region 4 CVS48_11755 PF09335 SNARE associated Golgi protein CVS48_11760 PF00561 alpha/beta hydrolase fold CVS48_11765 PF16123 Hydroxyacylglutathione hydrolase C-terminus CVS48_11765 PF00753 Metallo-beta-lactamase superfamily CVS48_11780 PF01699 Sodium/calcium exchanger protein CVS48_11790 PF00155 Aminotransferase class I and II CVS48_11790 PF00392 Bacterial regulatory proteins, gntR family CVS48_11795 PF03594 Benzoate membrane transport protein CVS48_11805 PF05683 Fumarase C-terminus CVS48_11805 PF05681 Fumarate hydratase (Fumerase) CVS48_11810 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_11815 PF00206 Lyase CVS48_11815 PF10397 Adenylosuccinate lyase C-terminus CVS48_11825 PF01810 LysE type translocator CVS48_11835 PF00723 Glycosyl hydrolases family 15 CVS48_11840 PF07694 5TMR of 5TMR-LYT CVS48_11840 PF00990 Diguanylate cyclase, GGDEF domain CVS48_11845 PF00072 Response regulator receiver domain CVS48_11845 PF00486 Transcriptional regulatory protein, C terminal CVS48_11850 PF12951 Passenger-associated-transport-repeat CVS48_11860 PF00884 Sulfatase CVS48_11885 PF00596 Class II Aldolase and Adducin N-terminal domain CVS48_11890 PF04264 YceI-like domain CVS48_11910 PF01494 FAD binding domain CVS48_11925 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_11930 PF03737 Aldolase/RraA CVS48_11940 PF00392 Bacterial regulatory proteins, gntR family CVS48_11940 PF07729 FCD domain CVS48_11945 PF00512 His Kinase A (phospho-acceptor) domain CVS48_11945 PF08521 Two-component sensor kinase N-terminal CVS48_11945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_11950 PF00072 Response regulator receiver domain CVS48_11950 PF00486 Transcriptional regulatory protein, C terminal CVS48_11960 PF04261 Dyp-type peroxidase family CVS48_11980 PF17755 UvrA DNA-binding domain CVS48_11990 PF00248 Aldo/keto reductase family CVS48_12005 PF00958 GMP synthase C terminal domain CVS48_12005 PF00117 Glutamine amidotransferase class-I CVS48_12005 PF03352 Methyladenine glycosylase CVS48_12005 PF13302 Acetyltransferase (GNAT) domain CVS48_12005 PF13673 Acetyltransferase (GNAT) domain CVS48_12030 PF00196 Bacterial regulatory proteins, luxR family CVS48_12030 PF00072 Response regulator receiver domain CVS48_12035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_12035 PF00512 His Kinase A (phospho-acceptor) domain CVS48_12035 PF09456 RcsC Alpha-Beta-Loop (ABL) CVS48_12035 PF00072 Response regulator receiver domain CVS48_12040 PF00563 EAL domain CVS48_12040 PF12792 CSS motif domain associated with EAL CVS48_12045 PF00072 Response regulator receiver domain CVS48_12045 PF09456 RcsC Alpha-Beta-Loop (ABL) CVS48_12045 PF00512 His Kinase A (phospho-acceptor) domain CVS48_12045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_12070 PF13609 Gram-negative porin CVS48_12080 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CVS48_12080 PF14572 Phosphoribosyl synthetase-associated domain CVS48_12085 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CVS48_12090 PF02104 SURF1 family CVS48_12095 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CVS48_12100 PF00510 Cytochrome c oxidase subunit III CVS48_12105 PF00115 Cytochrome C and Quinol oxidase polypeptide I CVS48_12110 PF06481 COX Aromatic Rich Motif CVS48_12110 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CVS48_12115 PF07690 Major Facilitator Superfamily CVS48_12115 PF00083 Sugar (and other) transporter CVS48_12120 PF00850 Histone deacetylase domain CVS48_12150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_12150 PF03466 LysR substrate binding domain CVS48_12155 PF03741 Integral membrane protein TerC family CVS48_12165 PF02311 AraC-like ligand binding domain CVS48_12165 PF12833 Helix-turn-helix domain CVS48_12170 PF07690 Major Facilitator Superfamily CVS48_12180 PF16485 Protealysin propeptide CVS48_12180 PF02868 Thermolysin metallopeptidase, alpha-helical domain CVS48_12180 PF01447 Thermolysin metallopeptidase, catalytic domain CVS48_12185 PF01145 SPFH domain / Band 7 family CVS48_12205 PF00593 TonB dependent receptor CVS48_12205 PF07715 TonB-dependent Receptor Plug Domain CVS48_12220 PF16220 Domain of unknown function (DUF4880) CVS48_12220 PF04773 FecR protein CVS48_12225 PF00593 TonB dependent receptor CVS48_12225 PF07660 Secretin and TonB N terminus short domain CVS48_12225 PF07715 TonB-dependent Receptor Plug Domain CVS48_12230 PF08448 PAS fold CVS48_12230 PF00072 Response regulator receiver domain CVS48_12230 PF13188 PAS domain CVS48_12230 PF00512 His Kinase A (phospho-acceptor) domain CVS48_12230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_12235 PF08281 Sigma-70, region 4 CVS48_12235 PF04542 Sigma-70 region 2 CVS48_12240 PF04773 FecR protein CVS48_12240 PF16220 Domain of unknown function (DUF4880) CVS48_12245 PF07715 TonB-dependent Receptor Plug Domain CVS48_12245 PF00593 TonB dependent receptor CVS48_12250 PF10282 Lactonase, 7-bladed beta-propeller CVS48_12260 PF00330 Aconitase family (aconitate hydratase) CVS48_12260 PF00694 Aconitase C-terminal domain CVS48_12265 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_12270 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA CVS48_12275 PF13419 Haloacid dehalogenase-like hydrolase CVS48_12285 PF02308 MgtC family CVS48_12310 PF13532 2OG-Fe(II) oxygenase superfamily CVS48_12315 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA CVS48_12320 PF13091 PLD-like domain CVS48_12325 PF07883 Cupin domain CVS48_12325 PF01381 Helix-turn-helix CVS48_12345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_12345 PF03466 LysR substrate binding domain CVS48_12350 PF00106 short chain dehydrogenase CVS48_12360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_12360 PF03466 LysR substrate binding domain CVS48_12375 PF00892 EamA-like transporter family CVS48_12390 PF00390 Malic enzyme, N-terminal domain CVS48_12390 PF03949 Malic enzyme, NAD binding domain CVS48_12390 PF01515 Phosphate acetyl/butaryl transferase CVS48_12395 PF03466 LysR substrate binding domain CVS48_12395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_12400 PF07687 Peptidase dimerisation domain CVS48_12400 PF01546 Peptidase family M20/M25/M40 CVS48_12420 PF04102 SlyX CVS48_12425 PF00593 TonB dependent receptor CVS48_12425 PF07715 TonB-dependent Receptor Plug Domain CVS48_12430 PF04891 NifQ CVS48_12440 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CVS48_12445 PF00510 Cytochrome c oxidase subunit III CVS48_12450 PF00115 Cytochrome C and Quinol oxidase polypeptide I CVS48_12455 PF06481 COX Aromatic Rich Motif CVS48_12455 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CVS48_12460 PF00072 Response regulator receiver domain CVS48_12465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_12465 PF00512 His Kinase A (phospho-acceptor) domain CVS48_12475 PF02630 SCO1/SenC CVS48_12485 PF01476 LysM domain CVS48_12485 PF01551 Peptidase family M23 CVS48_12490 PF00005 ABC transporter CVS48_12495 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_12500 PF00497 Bacterial extracellular solute-binding proteins, family 3 CVS48_12505 PF03576 Peptidase family S58 CVS48_12510 PF03006 Haemolysin-III related CVS48_12515 PF01037 Lrp/AsnC ligand binding domain CVS48_12515 PF13404 AsnC-type helix-turn-helix domain CVS48_12520 PF00266 Aminotransferase class-V CVS48_12525 PF00324 Amino acid permease CVS48_12550 PF08281 Sigma-70, region 4 CVS48_12550 PF04542 Sigma-70 region 2 CVS48_12555 PF04773 FecR protein CVS48_12555 PF16220 Domain of unknown function (DUF4880) CVS48_12565 PF05171 Haemin-degrading HemS.ChuX domain CVS48_12570 PF01497 Periplasmic binding protein CVS48_12575 PF01032 FecCD transport family CVS48_12580 PF00005 ABC transporter CVS48_12585 PF04461 Protein of unknown function (DUF520) CVS48_12590 PF03466 LysR substrate binding domain CVS48_12590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_12595 PF00730 HhH-GPD superfamily base excision DNA repair protein CVS48_12595 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain CVS48_12605 PF00180 Isocitrate/isopropylmalate dehydrogenase CVS48_12610 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_12615 PF01569 PAP2 superfamily CVS48_12625 PF07715 TonB-dependent Receptor Plug Domain CVS48_12625 PF00593 TonB dependent receptor CVS48_12635 PF00005 ABC transporter CVS48_12640 PF12399 Branched-chain amino acid ATP-binding cassette transporter CVS48_12640 PF00005 ABC transporter CVS48_12650 PF02653 Branched-chain amino acid transport system / permease component CVS48_12660 PF01425 Amidase CVS48_12665 PF00289 Biotin carboxylase, N-terminal domain CVS48_12665 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CVS48_12665 PF02785 Biotin carboxylase C-terminal domain CVS48_12665 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CVS48_12665 PF00364 Biotin-requiring enzyme CVS48_12665 PF02785 Biotin carboxylase C-terminal domain CVS48_12665 PF00289 Biotin carboxylase, N-terminal domain CVS48_12665 PF00364 Biotin-requiring enzyme CVS48_12670 PF00392 Bacterial regulatory proteins, gntR family CVS48_12670 PF07729 FCD domain CVS48_12675 PF00872 Transposase, Mutator family CVS48_12685 PF04542 Sigma-70 region 2 CVS48_12685 PF08281 Sigma-70, region 4 CVS48_12695 PF00583 Acetyltransferase (GNAT) family CVS48_12700 PF03466 LysR substrate binding domain CVS48_12700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_12705 PF04303 PrpF protein CVS48_12710 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_12735 PF00127 Copper binding proteins, plastocyanin/azurin family CVS48_12740 PF07995 Glucose / Sorbosone dehydrogenase CVS48_12755 PF00072 Response regulator receiver domain CVS48_12755 PF00486 Transcriptional regulatory protein, C terminal CVS48_12760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_12760 PF08918 PhoQ Sensor CVS48_12770 PF00582 Universal stress protein family CVS48_12775 PF01177 Asp/Glu/Hydantoin racemase CVS48_12780 PF03466 LysR substrate binding domain CVS48_12780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_12800 PF05175 Methyltransferase small domain CVS48_12805 PF07690 Major Facilitator Superfamily CVS48_12815 PF02634 FdhD/NarQ family CVS48_12820 PF01568 Molydopterin dinucleotide binding domain CVS48_12820 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CVS48_12820 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CVS48_12820 PF00037 4Fe-4S binding domain CVS48_12820 PF00384 Molybdopterin oxidoreductase CVS48_12825 PF00037 4Fe-4S binding domain CVS48_12825 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CVS48_12825 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CVS48_12840 PF04055 Radical SAM superfamily CVS48_12840 PF06463 Molybdenum Cofactor Synthesis C CVS48_12845 PF12804 MobA-like NTP transferase domain CVS48_12850 PF03453 MoeA N-terminal region (domain I and II) CVS48_12850 PF03454 MoeA C-terminal region (domain IV) CVS48_12850 PF00994 Probable molybdopterin binding domain CVS48_12855 PF00994 Probable molybdopterin binding domain CVS48_12860 PF02391 MoaE protein CVS48_12870 PF01967 MoaC family CVS48_12880 PF01738 Dienelactone hydrolase family CVS48_12890 PF00462 Glutaredoxin CVS48_12890 PF08534 Redoxin CVS48_12905 PF06968 Biotin and Thiamin Synthesis associated domain CVS48_12905 PF04055 Radical SAM superfamily CVS48_12945 PF00248 Aldo/keto reductase family CVS48_12950 PF00795 Carbon-nitrogen hydrolase CVS48_12955 PF03471 Transporter associated domain CVS48_12955 PF00571 CBS domain CVS48_12960 PF02130 Uncharacterized protein family UPF0054 CVS48_12965 PF02562 PhoH-like protein CVS48_12970 PF00919 Uncharacterized protein family UPF0004 CVS48_12970 PF01938 TRAM domain CVS48_12970 PF04055 Radical SAM superfamily CVS48_12985 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CVS48_12985 PF01411 tRNA synthetases class II (A) CVS48_12985 PF02272 DHHA1 domain CVS48_12995 PF07549 SecD/SecF GG Motif CVS48_12995 PF02355 Protein export membrane protein CVS48_13000 PF02355 Protein export membrane protein CVS48_13000 PF07549 SecD/SecF GG Motif CVS48_13000 PF13721 SecD export protein N-terminal TM region CVS48_13005 PF02699 Preprotein translocase subunit CVS48_13010 PF01702 Queuine tRNA-ribosyltransferase CVS48_13015 PF02547 Queuosine biosynthesis protein CVS48_13020 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CVS48_13030 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CVS48_13030 PF14824 Sirohaem biosynthesis protein central CVS48_13030 PF10414 Sirohaem synthase dimerisation region CVS48_13045 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_13050 PF00005 ABC transporter CVS48_13055 PF04324 BFD-like [2Fe-2S] binding domain CVS48_13055 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CVS48_13055 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CVS48_13055 PF07992 Pyridine nucleotide-disulphide oxidoreductase CVS48_13055 PF18267 Rubredoxin NAD+ reductase C-terminal domain CVS48_13060 PF04324 BFD-like [2Fe-2S] binding domain CVS48_13060 PF01568 Molydopterin dinucleotide binding domain CVS48_13060 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CVS48_13060 PF00384 Molybdopterin oxidoreductase CVS48_13070 PF05957 Bacterial protein of unknown function (DUF883) CVS48_13085 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CVS48_13090 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain CVS48_13090 PF01464 Transglycosylase SLT domain CVS48_13095 PF00155 Aminotransferase class I and II CVS48_13105 PF01515 Phosphate acetyl/butaryl transferase CVS48_13105 PF03949 Malic enzyme, NAD binding domain CVS48_13105 PF00390 Malic enzyme, N-terminal domain CVS48_13115 PF01337 Barstar (barnase inhibitor) CVS48_13120 PF04452 RNA methyltransferase CVS48_13130 PF00456 Transketolase, thiamine diphosphate binding domain CVS48_13130 PF02780 Transketolase, C-terminal domain CVS48_13130 PF02779 Transketolase, pyrimidine binding domain CVS48_13135 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CVS48_13135 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CVS48_13140 PF00162 Phosphoglycerate kinase CVS48_13145 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_13150 PF01740 STAS domain CVS48_13150 PF00916 Sulfate permease family CVS48_13160 PF00871 Acetokinase family CVS48_13165 PF01515 Phosphate acetyl/butaryl transferase CVS48_13170 PF11339 Protein of unknown function (DUF3141) CVS48_13175 PF02798 Glutathione S-transferase, N-terminal domain CVS48_13175 PF14834 Glutathione S-transferase, C-terminal domain CVS48_13185 PF00226 DnaJ domain CVS48_13185 PF01556 DnaJ C terminal domain CVS48_13205 PF01384 Phosphate transporter family CVS48_13215 PF00994 Probable molybdopterin binding domain CVS48_13225 PF01476 LysM domain CVS48_13225 PF01551 Peptidase family M23 CVS48_13225 PF08525 Opacity-associated protein A N-terminal motif CVS48_13235 PF01176 Translation initiation factor 1A / IF-1 CVS48_13250 PF00005 ABC transporter CVS48_13260 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_13270 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_13280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_13280 PF03466 LysR substrate binding domain CVS48_13290 PF06299 Protein of unknown function (DUF1045) CVS48_13295 PF07969 Amidohydrolase family CVS48_13305 PF06754 Phosphonate metabolism protein PhnG CVS48_13315 PF05861 Bacterial phosphonate metabolism protein (PhnI) CVS48_13320 PF06007 Phosphonate metabolism protein PhnJ CVS48_13325 PF00005 ABC transporter CVS48_13330 PF00005 ABC transporter CVS48_13335 PF07969 Amidohydrolase family CVS48_13350 PF00375 Sodium:dicarboxylate symporter family CVS48_13360 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CVS48_13370 PF01546 Peptidase family M20/M25/M40 CVS48_13370 PF07687 Peptidase dimerisation domain CVS48_13375 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CVS48_13380 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_13385 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_13385 PF12911 N-terminal TM domain of oligopeptide transport permease C CVS48_13390 PF00005 ABC transporter CVS48_13390 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS48_13395 PF01425 Amidase CVS48_13400 PF01116 Fructose-bisphosphate aldolase class-II CVS48_13410 PF01259 SAICAR synthetase CVS48_13415 PF02600 Disulfide bond formation protein DsbB CVS48_13420 PF00731 AIR carboxylase CVS48_13425 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CVS48_13425 PF02222 ATP-grasp domain CVS48_13430 PF03481 Putative GTP-binding controlling metal-binding CVS48_13430 PF01300 Telomere recombination CVS48_13435 PF09339 IclR helix-turn-helix domain CVS48_13435 PF01614 Bacterial transcriptional regulator CVS48_13440 PF01144 Coenzyme A transferase CVS48_13445 PF01144 Coenzyme A transferase CVS48_13450 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_13455 PF00497 Bacterial extracellular solute-binding proteins, family 3 CVS48_13460 PF09339 IclR helix-turn-helix domain CVS48_13460 PF01614 Bacterial transcriptional regulator CVS48_13470 PF00497 Bacterial extracellular solute-binding proteins, family 3 CVS48_13480 PF00005 ABC transporter CVS48_13485 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CVS48_13485 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CVS48_13490 PF00005 ABC transporter CVS48_13495 PF00005 ABC transporter CVS48_13495 PF12399 Branched-chain amino acid ATP-binding cassette transporter CVS48_13505 PF02653 Branched-chain amino acid transport system / permease component CVS48_13515 PF13193 AMP-binding enzyme C-terminal domain CVS48_13515 PF00501 AMP-binding enzyme CVS48_13525 PF01202 Shikimate kinase CVS48_13550 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CVS48_13550 PF02770 Acyl-CoA dehydrogenase, middle domain CVS48_13550 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CVS48_13555 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CVS48_13555 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CVS48_13555 PF00205 Thiamine pyrophosphate enzyme, central domain CVS48_13560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_13560 PF03466 LysR substrate binding domain CVS48_13565 PF02899 Phage integrase, N-terminal SAM-like domain CVS48_13565 PF00589 Phage integrase family CVS48_13570 PF04073 Aminoacyl-tRNA editing domain CVS48_13575 PF07729 FCD domain CVS48_13575 PF00392 Bacterial regulatory proteins, gntR family CVS48_13590 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_13595 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_13595 PF12911 N-terminal TM domain of oligopeptide transport permease C CVS48_13600 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS48_13600 PF00005 ABC transporter CVS48_13605 PF00355 Rieske [2Fe-2S] domain CVS48_13605 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CVS48_13615 PF00550 Phosphopantetheine attachment site CVS48_13615 PF08659 KR domain CVS48_13615 PF14765 Polyketide synthase dehydratase CVS48_13615 PF00109 Beta-ketoacyl synthase, N-terminal domain CVS48_13615 PF00698 Acyl transferase domain CVS48_13615 PF08240 Alcohol dehydrogenase GroES-like domain CVS48_13615 PF08990 Erythronolide synthase docking CVS48_13615 PF02801 Beta-ketoacyl synthase, C-terminal domain CVS48_13615 PF16197 Ketoacyl-synthetase C-terminal extension CVS48_13620 PF03466 LysR substrate binding domain CVS48_13620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_13625 PF00701 Dihydrodipicolinate synthetase family CVS48_13630 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_13640 PF01174 SNO glutamine amidotransferase family CVS48_13645 PF08240 Alcohol dehydrogenase GroES-like domain CVS48_13645 PF00107 Zinc-binding dehydrogenase CVS48_13655 PF00768 D-alanyl-D-alanine carboxypeptidase CVS48_13680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_13680 PF13492 GAF domain CVS48_13680 PF13493 Domain of unknown function (DUF4118) CVS48_13680 PF00512 His Kinase A (phospho-acceptor) domain CVS48_13680 PF02702 Osmosensitive K+ channel His kinase sensor domain CVS48_13685 PF00196 Bacterial regulatory proteins, luxR family CVS48_13685 PF00072 Response regulator receiver domain CVS48_13690 PF00501 AMP-binding enzyme CVS48_13690 PF13193 AMP-binding enzyme C-terminal domain CVS48_13690 PF16177 Acetyl-coenzyme A synthetase N-terminus CVS48_13695 PF00474 Sodium:solute symporter family CVS48_13705 PF07690 Major Facilitator Superfamily CVS48_13715 PF00580 UvrD/REP helicase N-terminal domain CVS48_13715 PF12705 PD-(D/E)XK nuclease superfamily CVS48_13715 PF13361 UvrD-like helicase C-terminal domain CVS48_13725 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding CVS48_13725 PF12170 DNA polymerase III tau subunit V interacting with alpha CVS48_13725 PF12169 DNA polymerase III subunits gamma and tau domain III CVS48_13730 PF02575 YbaB/EbfC DNA-binding family CVS48_13735 PF13662 Toprim domain CVS48_13735 PF02132 RecR protein CVS48_13740 PF02515 CoA-transferase family III CVS48_13750 PF00005 ABC transporter CVS48_13755 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_13760 PF01126 Heme oxygenase CVS48_13770 PF00486 Transcriptional regulatory protein, C terminal CVS48_13770 PF00072 Response regulator receiver domain CVS48_13775 PF00512 His Kinase A (phospho-acceptor) domain CVS48_13775 PF00360 Phytochrome region CVS48_13775 PF08446 PAS fold CVS48_13775 PF01590 GAF domain CVS48_13775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_13785 PF00923 Transaldolase/Fructose-6-phosphate aldolase CVS48_13790 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CVS48_13790 PF00117 Glutamine amidotransferase class-I CVS48_13795 PF02142 MGS-like domain CVS48_13795 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CVS48_13795 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CVS48_13800 PF00106 short chain dehydrogenase CVS48_13805 PF00300 Histidine phosphatase superfamily (branch 1) CVS48_13815 PF08402 TOBE domain CVS48_13815 PF00005 ABC transporter CVS48_13820 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_13835 PF00860 Permease family CVS48_13840 PF03449 Transcription elongation factor, N-terminal CVS48_13840 PF01272 Transcription elongation factor, GreA/GreB, C-term CVS48_13845 PF01985 CRS1 / YhbY (CRM) domain CVS48_13850 PF01728 FtsJ-like methyltransferase CVS48_13855 PF00004 ATPase family associated with various cellular activities (AAA) CVS48_13855 PF17862 AAA+ lid domain CVS48_13855 PF01434 Peptidase family M41 CVS48_13855 PF06480 FtsH Extracellular CVS48_13860 PF00809 Pterin binding enzyme CVS48_13865 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CVS48_13865 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CVS48_13865 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CVS48_13865 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CVS48_13875 PF02541 Ppx/GppA phosphatase family CVS48_13880 PF17941 Polyphosphate kinase C-terminal domain 1 CVS48_13880 PF02503 Polyphosphate kinase middle domain CVS48_13880 PF13090 Polyphosphate kinase C-terminal domain 2 CVS48_13880 PF13089 Polyphosphate kinase N-terminal domain CVS48_13885 PF12849 PBP superfamily domain CVS48_13890 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_13895 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_13900 PF00005 ABC transporter CVS48_13910 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_13915 PF00682 HMGL-like CVS48_13920 PF02515 CoA-transferase family III CVS48_13930 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CVS48_13930 PF13378 Enolase C-terminal domain-like CVS48_13935 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CVS48_13935 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CVS48_13945 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_13950 PF00106 short chain dehydrogenase CVS48_13955 PF07729 FCD domain CVS48_13955 PF00392 Bacterial regulatory proteins, gntR family CVS48_13975 PF08338 Domain of unknown function (DUF1731) CVS48_13975 PF01370 NAD dependent epimerase/dehydratase family CVS48_13985 PF05974 Domain of unknown function (DUF892) CVS48_13995 PF08240 Alcohol dehydrogenase GroES-like domain CVS48_13995 PF13823 Alcohol dehydrogenase GroES-associated CVS48_13995 PF00107 Zinc-binding dehydrogenase CVS48_14010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_14010 PF03466 LysR substrate binding domain CVS48_14015 PF00682 HMGL-like CVS48_14020 PF02515 CoA-transferase family III CVS48_14025 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_14055 PF00857 Isochorismatase family CVS48_14060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_14060 PF03466 LysR substrate binding domain CVS48_14065 PF06719 AraC-type transcriptional regulator N-terminus CVS48_14065 PF12833 Helix-turn-helix domain CVS48_14070 PF00248 Aldo/keto reductase family CVS48_14095 PF02469 Fasciclin domain CVS48_14110 PF05724 Thiopurine S-methyltransferase (TPMT) CVS48_14120 PF00109 Beta-ketoacyl synthase, N-terminal domain CVS48_14120 PF02801 Beta-ketoacyl synthase, C-terminal domain CVS48_14120 PF08240 Alcohol dehydrogenase GroES-like domain CVS48_14120 PF00550 Phosphopantetheine attachment site CVS48_14120 PF00698 Acyl transferase domain CVS48_14120 PF16197 Ketoacyl-synthetase C-terminal extension CVS48_14120 PF14765 Polyketide synthase dehydratase CVS48_14120 PF08659 KR domain CVS48_14125 PF00005 ABC transporter CVS48_14130 PF12399 Branched-chain amino acid ATP-binding cassette transporter CVS48_14130 PF00005 ABC transporter CVS48_14135 PF02653 Branched-chain amino acid transport system / permease component CVS48_14140 PF13458 Periplasmic binding protein CVS48_14150 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CVS48_14150 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CVS48_14155 PF05853 beta-keto acid cleavage enzyme CVS48_14160 PF00465 Iron-containing alcohol dehydrogenase CVS48_14165 PF07729 FCD domain CVS48_14165 PF00392 Bacterial regulatory proteins, gntR family CVS48_14170 PF00456 Transketolase, thiamine diphosphate binding domain CVS48_14175 PF02780 Transketolase, C-terminal domain CVS48_14175 PF02779 Transketolase, pyrimidine binding domain CVS48_14180 PF01488 Shikimate / quinate 5-dehydrogenase CVS48_14180 PF08501 Shikimate dehydrogenase substrate binding domain CVS48_14180 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CVS48_14185 PF05199 GMC oxidoreductase CVS48_14185 PF00732 GMC oxidoreductase CVS48_14190 PF05544 Proline racemase CVS48_14195 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_14200 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_14225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CVS48_14225 PF08447 PAS fold CVS48_14225 PF13426 PAS domain CVS48_14260 PF00924 Mechanosensitive ion channel CVS48_14260 PF12795 Mechanosensitive ion channel porin domain CVS48_14260 PF12794 Mechanosensitive ion channel inner membrane domain 1 CVS48_14265 PF03466 LysR substrate binding domain CVS48_14265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_14270 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CVS48_14270 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CVS48_14305 PF02954 Bacterial regulatory protein, Fis family CVS48_14305 PF00158 Sigma-54 interaction domain CVS48_14305 PF00072 Response regulator receiver domain CVS48_14310 PF00512 His Kinase A (phospho-acceptor) domain CVS48_14310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_14310 PF02743 Cache domain CVS48_14315 PF00375 Sodium:dicarboxylate symporter family CVS48_14320 PF02545 Maf-like protein CVS48_14325 PF02590 Predicted SPOUT methyltransferase CVS48_14335 PF01467 Cytidylyltransferase-like CVS48_14340 PF01218 Coproporphyrinogen III oxidase CVS48_14345 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CVS48_14345 PF02844 Phosphoribosylglycinamide synthetase, N domain CVS48_14345 PF02843 Phosphoribosylglycinamide synthetase, C domain CVS48_14350 PF01709 Transcriptional regulator CVS48_14355 PF05872 Bacterial protein of unknown function (DUF853) CVS48_14360 PF00180 Isocitrate/isopropylmalate dehydrogenase CVS48_14370 PF07690 Major Facilitator Superfamily CVS48_14375 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CVS48_14375 PF00529 HlyD membrane-fusion protein of T1SS CVS48_14380 PF02321 Outer membrane efflux protein CVS48_14400 PF00107 Zinc-binding dehydrogenase CVS48_14400 PF08240 Alcohol dehydrogenase GroES-like domain CVS48_14405 PF00171 Aldehyde dehydrogenase family CVS48_14415 PF06433 Methylamine dehydrogenase heavy chain (MADH) CVS48_14425 PF00578 AhpC/TSA family CVS48_14430 PF02975 Methylamine dehydrogenase, L chain CVS48_14440 PF14525 AraC-binding-like domain CVS48_14445 PF02677 Epoxyqueuosine reductase QueH CVS48_14450 PF08335 GlnD PII-uridylyltransferase CVS48_14450 PF03710 Glutamate-ammonia ligase adenylyltransferase CVS48_14460 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CVS48_14460 PF07498 Rho termination factor, N-terminal domain CVS48_14460 PF07497 Rho termination factor, RNA-binding domain CVS48_14465 PF00085 Thioredoxin CVS48_14470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_14470 PF00204 DNA gyrase B CVS48_14470 PF01751 Toprim domain CVS48_14470 PF00986 DNA gyrase B subunit, carboxyl terminus CVS48_14480 PF00521 DNA gyrase/topoisomerase IV, subunit A CVS48_14485 PF04235 Protein of unknown function (DUF418) CVS48_14495 PF16868 NMT1-like family CVS48_14500 PF00202 Aminotransferase class-III CVS48_14510 PF12802 MarR family CVS48_14515 PF00583 Acetyltransferase (GNAT) family CVS48_14520 PF00202 Aminotransferase class-III CVS48_14525 PF06339 Ectoine synthase CVS48_14530 PF05721 Phytanoyl-CoA dioxygenase (PhyH) CVS48_14535 PF03476 MOSC N-terminal beta barrel domain CVS48_14535 PF00111 2Fe-2S iron-sulfur cluster binding domain CVS48_14535 PF03473 MOSC domain CVS48_14540 PF00893 Small Multidrug Resistance protein CVS48_14545 PF02261 Aspartate decarboxylase CVS48_14550 PF00111 2Fe-2S iron-sulfur cluster binding domain CVS48_14550 PF00970 Oxidoreductase FAD-binding domain CVS48_14550 PF00175 Oxidoreductase NAD-binding domain CVS48_14555 PF01266 FAD dependent oxidoreductase CVS48_14560 PF13416 Bacterial extracellular solute-binding protein CVS48_14610 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CVS48_14610 PF01411 tRNA synthetases class II (A) CVS48_14610 PF02272 DHHA1 domain CVS48_14615 PF01206 Sulfurtransferase TusA CVS48_14630 PF00886 Ribosomal protein S16 CVS48_14635 PF01782 RimM N-terminal domain CVS48_14640 PF01746 tRNA (Guanine-1)-methyltransferase CVS48_14650 PF00497 Bacterial extracellular solute-binding proteins, family 3 CVS48_14655 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_14660 PF00005 ABC transporter CVS48_14665 PF01266 FAD dependent oxidoreductase CVS48_14675 PF08264 Anticodon-binding domain of tRNA CVS48_14675 PF00133 tRNA synthetases class I (I, L, M and V) CVS48_14675 PF10458 Valyl tRNA synthetase tRNA binding arm CVS48_14680 PF00334 Nucleoside diphosphate kinase CVS48_14685 PF04055 Radical SAM superfamily CVS48_14695 PF04551 GcpE protein CVS48_14700 PF03129 Anticodon binding domain CVS48_14700 PF13393 Histidyl-tRNA synthetase CVS48_14705 PF09976 Tetratricopeptide repeat-like domain CVS48_14710 PF13360 PQQ-like domain CVS48_14715 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CVS48_14715 PF01926 50S ribosome-binding GTPase CVS48_14720 PF00155 Aminotransferase class I and II CVS48_14725 PF17209 Hfq protein CVS48_14730 PF01926 50S ribosome-binding GTPase CVS48_14730 PF13167 GTP-binding GTPase N-terminal CVS48_14730 PF16360 GTP-binding GTPase Middle Region CVS48_14735 PF12221 Bacterial membrane protein N terminal CVS48_14735 PF01145 SPFH domain / Band 7 family CVS48_14740 PF01145 SPFH domain / Band 7 family CVS48_14745 PF13393 Histidyl-tRNA synthetase CVS48_14750 PF00709 Adenylosuccinate synthetase CVS48_14755 PF00156 Phosphoribosyl transferase domain CVS48_14760 PF01165 Ribosomal protein S21 CVS48_14765 PF08275 DNA primase catalytic core, N-terminal domain CVS48_14765 PF08278 DNA primase DnaG DnaB-binding CVS48_14765 PF10410 DnaB-helicase binding domain of primase CVS48_14765 PF01807 CHC2 zinc finger CVS48_14770 PF04542 Sigma-70 region 2 CVS48_14770 PF04545 Sigma-70, region 4 CVS48_14770 PF04539 Sigma-70 region 3 CVS48_14770 PF00140 Sigma-70 factor, region 1.2 CVS48_14770 PF04546 Sigma-70, non-essential region CVS48_14770 PF03979 Sigma-70 factor, region 1.1 CVS48_14830 PF04972 BON domain CVS48_14830 PF00263 Bacterial type II and III secretion system protein CVS48_14830 PF13629 Pilus formation protein N terminal region CVS48_14835 PF00437 Type II/IV secretion system protein CVS48_14855 PF01636 Phosphotransferase enzyme family CVS48_14860 PF01207 Dihydrouridine synthase (Dus) CVS48_14870 PF03631 Virulence factor BrkB CVS48_14880 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CVS48_14885 PF00072 Response regulator receiver domain CVS48_14885 PF00486 Transcriptional regulatory protein, C terminal CVS48_14890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_14890 PF07689 KaiB domain CVS48_14890 PF00512 His Kinase A (phospho-acceptor) domain CVS48_14905 PF01264 Chorismate synthase CVS48_14910 PF01435 Peptidase family M48 CVS48_14910 PF07720 Tetratricopeptide repeat CVS48_14935 PF00072 Response regulator receiver domain CVS48_14935 PF00196 Bacterial regulatory proteins, luxR family CVS48_14945 PF00664 ABC transporter transmembrane region CVS48_14945 PF03412 Peptidase C39 family CVS48_14945 PF00005 ABC transporter CVS48_14955 PF02321 Outer membrane efflux protein CVS48_14960 PF00330 Aconitase family (aconitate hydratase) CVS48_14965 PF00694 Aconitase C-terminal domain CVS48_14970 PF00180 Isocitrate/isopropylmalate dehydrogenase CVS48_14975 PF02774 Semialdehyde dehydrogenase, dimerisation domain CVS48_14975 PF01118 Semialdehyde dehydrogenase, NAD binding domain CVS48_14985 PF01416 tRNA pseudouridine synthase CVS48_14990 PF03480 Bacterial extracellular solute-binding protein, family 7 CVS48_14995 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CVS48_15005 PF03707 Bacterial signalling protein N terminal repeat CVS48_15005 PF00990 Diguanylate cyclase, GGDEF domain CVS48_15005 PF00563 EAL domain CVS48_15030 PF04304 Protein of unknown function (DUF454) CVS48_15035 PF00920 Dehydratase family CVS48_15040 PF03480 Bacterial extracellular solute-binding protein, family 7 CVS48_15045 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CVS48_15050 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CVS48_15055 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CVS48_15055 PF00356 Bacterial regulatory proteins, lacI family CVS48_15060 PF00892 EamA-like transporter family CVS48_15065 PF00850 Histone deacetylase domain CVS48_15070 PF07883 Cupin domain CVS48_15075 PF00005 ABC transporter CVS48_15075 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS48_15080 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_15080 PF12911 N-terminal TM domain of oligopeptide transport permease C CVS48_15085 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_15090 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CVS48_15095 PF01546 Peptidase family M20/M25/M40 CVS48_15095 PF07687 Peptidase dimerisation domain CVS48_15100 PF00392 Bacterial regulatory proteins, gntR family CVS48_15100 PF07729 FCD domain CVS48_15110 PF06969 HemN C-terminal domain CVS48_15110 PF04055 Radical SAM superfamily CVS48_15115 PF00196 Bacterial regulatory proteins, luxR family CVS48_15115 PF00072 Response regulator receiver domain CVS48_15120 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CVS48_15120 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CVS48_15120 PF02824 TGS domain CVS48_15120 PF03129 Anticodon binding domain CVS48_15125 PF00707 Translation initiation factor IF-3, C-terminal domain CVS48_15125 PF05198 Translation initiation factor IF-3, N-terminal domain CVS48_15130 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CVS48_15130 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CVS48_15140 PF00381 PTS HPr component phosphorylation site CVS48_15145 PF05524 PEP-utilising enzyme, N-terminal CVS48_15145 PF00391 PEP-utilising enzyme, mobile domain CVS48_15145 PF02896 PEP-utilising enzyme, TIM barrel domain CVS48_15150 PF00909 Ammonium Transporter Family CVS48_15155 PF00543 Nitrogen regulatory protein P-II CVS48_15160 PF04380 Membrane fusogenic activity CVS48_15165 PF13335 Magnesium chelatase, subunit ChlI C-terminal CVS48_15165 PF01078 Magnesium chelatase, subunit ChlI CVS48_15170 PF01632 Ribosomal protein L35 CVS48_15175 PF00453 Ribosomal protein L20 CVS48_15180 PF01409 tRNA synthetases class II core domain (F) CVS48_15180 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CVS48_15185 PF03484 tRNA synthetase B5 domain CVS48_15185 PF03147 Ferredoxin-fold anticodon binding domain CVS48_15185 PF01588 Putative tRNA binding domain CVS48_15185 PF03483 B3/4 domain CVS48_15185 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CVS48_15190 PF00216 Bacterial DNA-binding protein CVS48_15215 PF00561 alpha/beta hydrolase fold CVS48_15225 PF02567 Phenazine biosynthesis-like protein CVS48_15230 PF00583 Acetyltransferase (GNAT) family CVS48_15260 PF01037 Lrp/AsnC ligand binding domain CVS48_15295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_15295 PF03466 LysR substrate binding domain CVS48_15300 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_15315 PF03466 LysR substrate binding domain CVS48_15315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_15320 PF13593 SBF-like CPA transporter family (DUF4137) CVS48_15330 PF00664 ABC transporter transmembrane region CVS48_15330 PF00005 ABC transporter CVS48_15335 PF00248 Aldo/keto reductase family CVS48_15350 PF00149 Calcineurin-like phosphoesterase CVS48_15355 PF17092 Penicillin-binding protein OB-like domain CVS48_15355 PF00905 Penicillin binding protein transpeptidase domain CVS48_15355 PF00912 Transglycosylase CVS48_15365 PF07690 Major Facilitator Superfamily CVS48_15370 PF00563 EAL domain CVS48_15370 PF13188 PAS domain CVS48_15370 PF00990 Diguanylate cyclase, GGDEF domain CVS48_15370 PF03707 Bacterial signalling protein N terminal repeat CVS48_15375 PF00326 Prolyl oligopeptidase family CVS48_15390 PF11799 impB/mucB/samB family C-terminal domain CVS48_15390 PF11798 IMS family HHH motif CVS48_15390 PF00817 impB/mucB/samB family CVS48_15395 PF09424 Yqey-like protein CVS48_15405 PF00109 Beta-ketoacyl synthase, N-terminal domain CVS48_15405 PF02801 Beta-ketoacyl synthase, C-terminal domain CVS48_15420 PF02801 Beta-ketoacyl synthase, C-terminal domain CVS48_15420 PF00109 Beta-ketoacyl synthase, N-terminal domain CVS48_15460 PF07977 FabA-like domain CVS48_15470 PF00550 Phosphopantetheine attachment site CVS48_15475 PF00550 Phosphopantetheine attachment site CVS48_15495 PF00175 Oxidoreductase NAD-binding domain CVS48_15495 PF00042 Globin CVS48_15495 PF00970 Oxidoreductase FAD-binding domain CVS48_15500 PF02082 Transcriptional regulator CVS48_15505 PF01266 FAD dependent oxidoreductase CVS48_15510 PF01619 Proline dehydrogenase CVS48_15525 PF03466 LysR substrate binding domain CVS48_15525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_15530 PF07690 Major Facilitator Superfamily CVS48_15540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_15540 PF03466 LysR substrate binding domain CVS48_15545 PF02798 Glutathione S-transferase, N-terminal domain CVS48_15555 PF01638 HxlR-like helix-turn-helix CVS48_15560 PF07690 Major Facilitator Superfamily CVS48_15565 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CVS48_15565 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CVS48_15565 PF12806 Acetyl-CoA dehydrogenase C-terminal like CVS48_15565 PF02770 Acyl-CoA dehydrogenase, middle domain CVS48_15570 PF00501 AMP-binding enzyme CVS48_15570 PF13193 AMP-binding enzyme C-terminal domain CVS48_15580 PF01177 Asp/Glu/Hydantoin racemase CVS48_15590 PF17831 Pyruvate dehydrogenase E1 component middle domain CVS48_15590 PF00456 Transketolase, thiamine diphosphate binding domain CVS48_15595 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CVS48_15595 PF07992 Pyridine nucleotide-disulphide oxidoreductase CVS48_15605 PF01810 LysE type translocator CVS48_15615 PF00392 Bacterial regulatory proteins, gntR family CVS48_15615 PF00155 Aminotransferase class I and II CVS48_15625 PF00892 EamA-like transporter family CVS48_15630 PF00892 EamA-like transporter family CVS48_15640 PF07687 Peptidase dimerisation domain CVS48_15640 PF01546 Peptidase family M20/M25/M40 CVS48_15645 PF00378 Enoyl-CoA hydratase/isomerase CVS48_15660 PF00501 AMP-binding enzyme CVS48_15660 PF13193 AMP-binding enzyme C-terminal domain CVS48_15665 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain CVS48_15665 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain CVS48_15670 PF06250 YhcG PDDEXK nuclease domain CVS48_15670 PF17761 DUF1016 N-terminal domain CVS48_15675 PF13649 Methyltransferase domain CVS48_15680 PF05726 Pirin C-terminal cupin domain CVS48_15680 PF02678 Pirin CVS48_15690 PF13247 4Fe-4S dicluster domain CVS48_15695 PF03916 Polysulphide reductase, NrfD CVS48_15700 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CVS48_15700 PF01568 Molydopterin dinucleotide binding domain CVS48_15700 PF00384 Molybdopterin oxidoreductase CVS48_15710 PF03918 Cytochrome C biogenesis protein CVS48_15715 PF08534 Redoxin CVS48_15720 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal CVS48_15720 PF01578 Cytochrome C assembly protein CVS48_15735 PF01578 Cytochrome C assembly protein CVS48_15740 PF03379 CcmB protein CVS48_15745 PF00005 ABC transporter CVS48_15750 PF03264 NapC/NirT cytochrome c family, N-terminal region CVS48_15755 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) CVS48_15760 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CVS48_15760 PF00384 Molybdopterin oxidoreductase CVS48_15760 PF01568 Molydopterin dinucleotide binding domain CVS48_15770 PF06796 Periplasmic nitrate reductase protein NapE CVS48_15775 PF05853 beta-keto acid cleavage enzyme CVS48_15780 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain CVS48_15780 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CVS48_15780 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CVS48_15785 PF03466 LysR substrate binding domain CVS48_15785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_15790 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CVS48_15805 PF00920 Dehydratase family CVS48_15810 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_15815 PF13426 PAS domain CVS48_15815 PF00990 Diguanylate cyclase, GGDEF domain CVS48_15815 PF00563 EAL domain CVS48_15820 PF00378 Enoyl-CoA hydratase/isomerase CVS48_15825 PF07715 TonB-dependent Receptor Plug Domain CVS48_15825 PF00593 TonB dependent receptor CVS48_15835 PF03466 LysR substrate binding domain CVS48_15835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_15855 PF07702 UTRA domain CVS48_15855 PF00392 Bacterial regulatory proteins, gntR family CVS48_15860 PF13193 AMP-binding enzyme C-terminal domain CVS48_15860 PF00501 AMP-binding enzyme CVS48_15870 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_15885 PF12833 Helix-turn-helix domain CVS48_15885 PF01965 DJ-1/PfpI family CVS48_15890 PF01965 DJ-1/PfpI family CVS48_15895 PF00005 ABC transporter CVS48_15895 PF00664 ABC transporter transmembrane region CVS48_15900 PF03466 LysR substrate binding domain CVS48_15900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_15905 PF01804 Penicillin amidase CVS48_15910 PF00664 ABC transporter transmembrane region CVS48_15910 PF00005 ABC transporter CVS48_15915 PF03466 LysR substrate binding domain CVS48_15915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_15920 PF00005 ABC transporter CVS48_15925 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_15930 PF09084 NMT1/THI5 like CVS48_15935 PF08669 Glycine cleavage T-protein C-terminal barrel domain CVS48_15935 PF01571 Aminomethyltransferase folate-binding domain CVS48_15935 PF01266 FAD dependent oxidoreductase CVS48_15935 PF16350 FAD dependent oxidoreductase central domain CVS48_15945 PF01012 Electron transfer flavoprotein domain CVS48_15950 PF00766 Electron transfer flavoprotein FAD-binding domain CVS48_15950 PF01012 Electron transfer flavoprotein domain CVS48_15955 PF03466 LysR substrate binding domain CVS48_15955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_15965 PF01914 MarC family integral membrane protein CVS48_15975 PF00296 Luciferase-like monooxygenase CVS48_16005 PF03062 MBOAT, membrane-bound O-acyltransferase family CVS48_16010 PF07729 FCD domain CVS48_16010 PF00392 Bacterial regulatory proteins, gntR family CVS48_16015 PF00171 Aldehyde dehydrogenase family CVS48_16020 PF00677 Lumazine binding domain CVS48_16030 PF00596 Class II Aldolase and Adducin N-terminal domain CVS48_16035 PF13302 Acetyltransferase (GNAT) domain CVS48_16040 PF00403 Heavy-metal-associated domain CVS48_16045 PF13411 MerR HTH family regulatory protein CVS48_16055 PF04542 Sigma-70 region 2 CVS48_16055 PF08281 Sigma-70, region 4 CVS48_16065 PF07715 TonB-dependent Receptor Plug Domain CVS48_16065 PF00593 TonB dependent receptor CVS48_16070 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal CVS48_16070 PF00676 Dehydrogenase E1 component CVS48_16075 PF02779 Transketolase, pyrimidine binding domain CVS48_16075 PF02780 Transketolase, C-terminal domain CVS48_16080 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CVS48_16080 PF02817 e3 binding domain CVS48_16080 PF00364 Biotin-requiring enzyme CVS48_16085 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CVS48_16085 PF07992 Pyridine nucleotide-disulphide oxidoreductase CVS48_16100 PF07715 TonB-dependent Receptor Plug Domain CVS48_16100 PF00593 TonB dependent receptor CVS48_16105 PF16220 Domain of unknown function (DUF4880) CVS48_16105 PF04773 FecR protein CVS48_16115 PF14698 Argininosuccinate lyase C-terminal CVS48_16115 PF00206 Lyase CVS48_16120 PF00924 Mechanosensitive ion channel CVS48_16125 PF00795 Carbon-nitrogen hydrolase CVS48_16125 PF02540 NAD synthase CVS48_16130 PF00543 Nitrogen regulatory protein P-II CVS48_16135 PF00482 Type II secretion system (T2SS), protein F CVS48_16140 PF03958 Bacterial type II/III secretion system short domain CVS48_16140 PF00263 Bacterial type II and III secretion system protein CVS48_16145 PF00437 Type II/IV secretion system protein CVS48_16165 PF03934 Type II secretion system (T2SS), protein K CVS48_16170 PF07963 Prokaryotic N-terminal methylation motif CVS48_16170 PF11612 Type II secretion system (T2SS), protein J CVS48_16180 PF07963 Prokaryotic N-terminal methylation motif CVS48_16180 PF12019 Type II transport protein GspH CVS48_16185 PF07963 Prokaryotic N-terminal methylation motif CVS48_16185 PF08334 Type II secretion system (T2SS), protein G CVS48_16190 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_16195 PF01370 NAD dependent epimerase/dehydratase family CVS48_16200 PF00171 Aldehyde dehydrogenase family CVS48_16205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_16205 PF03466 LysR substrate binding domain CVS48_16230 PF04185 Phosphoesterase family CVS48_16230 PF05506 Domain of unknown function (DUF756) CVS48_16235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_16235 PF03466 LysR substrate binding domain CVS48_16245 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CVS48_16250 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_16260 PF00005 ABC transporter CVS48_16260 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS48_16270 PF07152 YaeQ protein CVS48_16275 PF00440 Bacterial regulatory proteins, tetR family CVS48_16280 PF00106 short chain dehydrogenase CVS48_16285 PF07690 Major Facilitator Superfamily CVS48_16295 PF08521 Two-component sensor kinase N-terminal CVS48_16295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_16295 PF00512 His Kinase A (phospho-acceptor) domain CVS48_16300 PF00072 Response regulator receiver domain CVS48_16300 PF00486 Transcriptional regulatory protein, C terminal CVS48_16345 PF00593 TonB dependent receptor CVS48_16345 PF07715 TonB-dependent Receptor Plug Domain CVS48_16350 PF03466 LysR substrate binding domain CVS48_16350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_16355 PF02798 Glutathione S-transferase, N-terminal domain CVS48_16355 PF00043 Glutathione S-transferase, C-terminal domain CVS48_16360 PF00296 Luciferase-like monooxygenase CVS48_16365 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_16370 PF14698 Argininosuccinate lyase C-terminal CVS48_16370 PF00206 Lyase CVS48_16375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_16375 PF03466 LysR substrate binding domain CVS48_16380 PF08281 Sigma-70, region 4 CVS48_16380 PF04542 Sigma-70 region 2 CVS48_16385 PF16220 Domain of unknown function (DUF4880) CVS48_16385 PF04773 FecR protein CVS48_16390 PF00593 TonB dependent receptor CVS48_16390 PF07715 TonB-dependent Receptor Plug Domain CVS48_16395 PF01638 HxlR-like helix-turn-helix CVS48_16400 PF08240 Alcohol dehydrogenase GroES-like domain CVS48_16400 PF00107 Zinc-binding dehydrogenase CVS48_16415 PF12631 MnmE helical domain CVS48_16415 PF10396 GTP-binding protein TrmE N-terminus CVS48_16415 PF01926 50S ribosome-binding GTPase CVS48_16435 PF01266 FAD dependent oxidoreductase CVS48_16450 PF10117 McrBC 5-methylcytosine restriction system component CVS48_16455 PF07728 AAA domain (dynein-related subfamily) CVS48_16455 PF12102 Domain of unknown function (DUF3578) CVS48_16475 PF12951 Passenger-associated-transport-repeat CVS48_16475 PF12951 Passenger-associated-transport-repeat CVS48_16500 PF07702 UTRA domain CVS48_16500 PF00392 Bacterial regulatory proteins, gntR family CVS48_16505 PF13458 Periplasmic binding protein CVS48_16510 PF02653 Branched-chain amino acid transport system / permease component CVS48_16515 PF02653 Branched-chain amino acid transport system / permease component CVS48_16515 PF11862 Domain of unknown function (DUF3382) CVS48_16520 PF00005 ABC transporter CVS48_16520 PF12399 Branched-chain amino acid ATP-binding cassette transporter CVS48_16525 PF00005 ABC transporter CVS48_16530 PF00330 Aconitase family (aconitate hydratase) CVS48_16535 PF00694 Aconitase C-terminal domain CVS48_16540 PF02538 Hydantoinase B/oxoprolinase CVS48_16545 PF05378 Hydantoinase/oxoprolinase N-terminal region CVS48_16545 PF01968 Hydantoinase/oxoprolinase CVS48_16550 PF00857 Isochorismatase family CVS48_16570 PF01740 STAS domain CVS48_16570 PF00916 Sulfate permease family CVS48_16575 PF04345 Chorismate lyase CVS48_16580 PF00795 Carbon-nitrogen hydrolase CVS48_16585 PF13188 PAS domain CVS48_16585 PF02954 Bacterial regulatory protein, Fis family CVS48_16585 PF00158 Sigma-54 interaction domain CVS48_16590 PF02653 Branched-chain amino acid transport system / permease component CVS48_16595 PF12399 Branched-chain amino acid ATP-binding cassette transporter CVS48_16595 PF00005 ABC transporter CVS48_16600 PF00005 ABC transporter CVS48_16615 PF07364 Metallopeptidase family M81 CVS48_16615 PF07171 MlrC C-terminus CVS48_16620 PF01479 S4 domain CVS48_16620 PF00849 RNA pseudouridylate synthase CVS48_16625 PF03466 LysR substrate binding domain CVS48_16625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_16630 PF00529 HlyD membrane-fusion protein of T1SS CVS48_16630 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CVS48_16635 PF00873 AcrB/AcrD/AcrF family CVS48_16640 PF02321 Outer membrane efflux protein CVS48_16645 PF04226 Transglycosylase associated protein CVS48_16650 PF02630 SCO1/SenC CVS48_16660 PF01432 Peptidase family M3 CVS48_16665 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CVS48_16665 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CVS48_16670 PF00072 Response regulator receiver domain CVS48_16670 PF00196 Bacterial regulatory proteins, luxR family CVS48_16675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_16675 PF00989 PAS fold CVS48_16675 PF00512 His Kinase A (phospho-acceptor) domain CVS48_16680 PF17831 Pyruvate dehydrogenase E1 component middle domain CVS48_16680 PF00456 Transketolase, thiamine diphosphate binding domain CVS48_16685 PF02817 e3 binding domain CVS48_16685 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CVS48_16685 PF00364 Biotin-requiring enzyme CVS48_16690 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CVS48_16690 PF07992 Pyridine nucleotide-disulphide oxidoreductase CVS48_16715 PF00132 Bacterial transferase hexapeptide (six repeats) CVS48_16715 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal CVS48_16715 PF14602 Hexapeptide repeat of succinyl-transferase CVS48_16720 PF04989 Cephalosporin hydroxylase CVS48_16730 PF08421 Putative zinc binding domain CVS48_16730 PF08484 C-methyltransferase C-terminal domain CVS48_16735 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CVS48_16740 PF16363 GDP-mannose 4,6 dehydratase CVS48_16745 PF00483 Nucleotidyl transferase CVS48_16755 PF12445 Flagellin protein CVS48_16755 PF00669 Bacterial flagellin N-terminal helical region CVS48_16755 PF00700 Bacterial flagellin C-terminal helical region CVS48_16760 PF04542 Sigma-70 region 2 CVS48_16760 PF04539 Sigma-70 region 3 CVS48_16760 PF04545 Sigma-70, region 4 CVS48_16765 PF05247 Flagellar transcriptional activator (FlhD) CVS48_16770 PF05280 Flagellar transcriptional activator (FlhC) CVS48_16775 PF01618 MotA/TolQ/ExbB proton channel family CVS48_16780 PF13677 Membrane MotB of proton-channel complex MotA/MotB CVS48_16780 PF00691 OmpA family CVS48_16785 PF00158 Sigma-54 interaction domain CVS48_16785 PF02954 Bacterial regulatory protein, Fis family CVS48_16785 PF00072 Response regulator receiver domain CVS48_16790 PF09078 CheY binding CVS48_16790 PF01627 Hpt domain CVS48_16790 PF01584 CheW-like domain CVS48_16790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_16790 PF02895 Signal transducing histidine kinase, homodimeric domain CVS48_16795 PF01584 CheW-like domain CVS48_16800 PF00672 HAMP domain CVS48_16800 PF02203 Tar ligand binding domain homologue CVS48_16800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CVS48_16805 PF01739 CheR methyltransferase, SAM binding domain CVS48_16805 PF03705 CheR methyltransferase, all-alpha domain CVS48_16810 PF01339 CheB methylesterase CVS48_16810 PF00072 Response regulator receiver domain CVS48_16815 PF00072 Response regulator receiver domain CVS48_16820 PF04344 Chemotaxis phosphatase, CheZ CVS48_16825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CVS48_16825 PF00672 HAMP domain CVS48_16825 PF17200 Single Cache domain 2 CVS48_16830 PF01312 FlhB HrpN YscU SpaS Family CVS48_16835 PF00771 FHIPEP family CVS48_16840 PF00448 SRP54-type protein, GTPase domain CVS48_16840 PF00448 SRP54-type protein, GTPase domain CVS48_16850 PF04316 Anti-sigma-28 factor, FlgM CVS48_16860 PF00460 Flagella basal body rod protein CVS48_16865 PF00460 Flagella basal body rod protein CVS48_16865 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CVS48_16870 PF13860 FlgD Ig-like domain CVS48_16870 PF13861 FlgD Tudor-like domain CVS48_16870 PF03963 Flagellar hook capping protein - N-terminal region CVS48_16875 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CVS48_16875 PF00460 Flagella basal body rod protein CVS48_16875 PF07559 Flagellar basal body protein FlaE CVS48_16880 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CVS48_16880 PF00460 Flagella basal body rod protein CVS48_16885 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CVS48_16885 PF00460 Flagella basal body rod protein CVS48_16890 PF02107 Flagellar L-ring protein CVS48_16895 PF02119 Flagellar P-ring protein CVS48_16900 PF10135 Rod binding protein CVS48_16900 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CVS48_16905 PF00460 Flagella basal body rod protein CVS48_16905 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CVS48_16910 PF00669 Bacterial flagellin N-terminal helical region CVS48_16915 PF02203 Tar ligand binding domain homologue CVS48_16915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CVS48_16915 PF00672 HAMP domain CVS48_16920 PF02203 Tar ligand binding domain homologue CVS48_16920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CVS48_16920 PF00672 HAMP domain CVS48_16935 PF08447 PAS fold CVS48_16935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CVS48_16940 PF01311 Bacterial export proteins, family 1 CVS48_16945 PF01313 Bacterial export proteins, family 3 CVS48_16950 PF00813 FliP family CVS48_16955 PF04347 Flagellar biosynthesis protein, FliO CVS48_16960 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CVS48_16960 PF16973 Flagellar motor switch protein FliN N-terminal CVS48_16965 PF02154 Flagellar motor switch protein FliM CVS48_16965 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CVS48_16970 PF03748 Flagellar basal body-associated protein FliL CVS48_16985 PF18269 T3SS EscN ATPase C-terminal domain CVS48_16985 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CVS48_16990 PF02108 Flagellar assembly protein FliH CVS48_16995 PF14841 FliG middle domain CVS48_16995 PF14842 FliG N-terminal domain CVS48_16995 PF01706 FliG C-terminal domain CVS48_17000 PF01514 Secretory protein of YscJ/FliF family CVS48_17000 PF08345 Flagellar M-ring protein C-terminal CVS48_17005 PF02049 Flagellar hook-basal body complex protein FliE CVS48_17015 PF01312 FlhB HrpN YscU SpaS Family CVS48_17030 PF02561 Flagellar protein FliS CVS48_17035 PF07195 Flagellar hook-associated protein 2 C-terminus CVS48_17035 PF02465 Flagellar hook-associated protein 2 N-terminus CVS48_17050 PF02770 Acyl-CoA dehydrogenase, middle domain CVS48_17050 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CVS48_17050 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CVS48_17055 PF02515 CoA-transferase family III CVS48_17060 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_17070 PF02875 Mur ligase family, glutamate ligase domain CVS48_17070 PF08245 Mur ligase middle domain CVS48_17080 PF02674 Colicin V production protein CVS48_17085 PF00156 Phosphoribosyl transferase domain CVS48_17095 PF01863 Protein of unknown function DUF45 CVS48_17100 PF02600 Disulfide bond formation protein DsbB CVS48_17110 PF08335 GlnD PII-uridylyltransferase CVS48_17110 PF01909 Nucleotidyltransferase domain CVS48_17110 PF01966 HD domain CVS48_17115 PF00557 Metallopeptidase family M24 CVS48_17120 PF00318 Ribosomal protein S2 CVS48_17125 PF00889 Elongation factor TS CVS48_17130 PF00696 Amino acid kinase family CVS48_17135 PF01765 Ribosome recycling factor CVS48_17140 PF01255 Putative undecaprenyl diphosphate synthase CVS48_17150 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CVS48_17150 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CVS48_17150 PF13288 DXP reductoisomerase C-terminal domain CVS48_17155 PF02163 Peptidase family M50 CVS48_17155 PF17820 PDZ domain CVS48_17160 PF07244 Surface antigen variable number repeat CVS48_17160 PF01103 Surface antigen CVS48_17165 PF03938 Outer membrane protein (OmpH-like) CVS48_17170 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CVS48_17170 PF14602 Hexapeptide repeat of succinyl-transferase CVS48_17170 PF00132 Bacterial transferase hexapeptide (six repeats) CVS48_17175 PF07977 FabA-like domain CVS48_17180 PF00132 Bacterial transferase hexapeptide (six repeats) CVS48_17180 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CVS48_17185 PF02684 Lipid-A-disaccharide synthetase CVS48_17190 PF01351 Ribonuclease HII CVS48_17195 PF00588 SpoU rRNA Methylase family CVS48_17195 PF08032 RNA 2'-O ribose methyltransferase substrate binding CVS48_17210 PF03618 Kinase/pyrophosphorylase CVS48_17215 PF00391 PEP-utilising enzyme, mobile domain CVS48_17215 PF02896 PEP-utilising enzyme, TIM barrel domain CVS48_17215 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CVS48_17220 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CVS48_17220 PF12833 Helix-turn-helix domain CVS48_17220 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CVS48_17220 PF02805 Metal binding domain of Ada CVS48_17225 PF00958 GMP synthase C terminal domain CVS48_17225 PF00117 Glutamine amidotransferase class-I CVS48_17235 PF01145 SPFH domain / Band 7 family CVS48_17240 PF00990 Diguanylate cyclase, GGDEF domain CVS48_17240 PF00072 Response regulator receiver domain CVS48_17245 PF01668 SmpB protein CVS48_17250 PF03364 Polyketide cyclase / dehydrase and lipid transport CVS48_17260 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CVS48_17260 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CVS48_17260 PF02770 Acyl-CoA dehydrogenase, middle domain CVS48_17265 PF00378 Enoyl-CoA hydratase/isomerase CVS48_17270 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CVS48_17270 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CVS48_17285 PF01571 Aminomethyltransferase folate-binding domain CVS48_17290 PF02618 YceG-like family CVS48_17295 PF02223 Thymidylate kinase CVS48_17300 PF12169 DNA polymerase III subunits gamma and tau domain III CVS48_17305 PF01026 TatD related DNase CVS48_17320 PF00497 Bacterial extracellular solute-binding proteins, family 3 CVS48_17330 PF00005 ABC transporter CVS48_17335 PF00491 Arginase family CVS48_17340 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CVS48_17340 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CVS48_17345 PF13609 Gram-negative porin CVS48_17355 PF10437 Bacterial lipoate protein ligase C-terminus CVS48_17355 PF03099 Biotin/lipoate A/B protein ligase family CVS48_17370 PF00043 Glutathione S-transferase, C-terminal domain CVS48_17370 PF02798 Glutathione S-transferase, N-terminal domain CVS48_17380 PF01037 Lrp/AsnC ligand binding domain CVS48_17385 PF00255 Glutathione peroxidase CVS48_17395 PF03441 FAD binding domain of DNA photolyase CVS48_17395 PF00875 DNA photolyase CVS48_17400 PF02515 CoA-transferase family III CVS48_17405 PF00578 AhpC/TSA family CVS48_17415 PF07681 DoxX CVS48_17430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_17430 PF03466 LysR substrate binding domain CVS48_17435 PF13378 Enolase C-terminal domain-like CVS48_17435 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CVS48_17440 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_17455 PF00593 TonB dependent receptor CVS48_17455 PF07660 Secretin and TonB N terminus short domain CVS48_17455 PF07715 TonB-dependent Receptor Plug Domain CVS48_17470 PF03466 LysR substrate binding domain CVS48_17470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_17485 PF03466 LysR substrate binding domain CVS48_17485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_17495 PF07690 Major Facilitator Superfamily CVS48_17500 PF12951 Passenger-associated-transport-repeat CVS48_17530 PF12951 Passenger-associated-transport-repeat CVS48_17535 PF01625 Peptide methionine sulfoxide reductase CVS48_17540 PF01641 SelR domain CVS48_17550 PF00174 Oxidoreductase molybdopterin binding domain CVS48_17555 PF01292 Prokaryotic cytochrome b561 CVS48_17560 PF00486 Transcriptional regulatory protein, C terminal CVS48_17560 PF00072 Response regulator receiver domain CVS48_17565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_17565 PF00672 HAMP domain CVS48_17565 PF18698 Histidine kinase sensor domain CVS48_17565 PF00512 His Kinase A (phospho-acceptor) domain CVS48_17565 PF00989 PAS fold CVS48_17570 PF03060 Nitronate monooxygenase CVS48_17575 PF01614 Bacterial transcriptional regulator CVS48_17575 PF09339 IclR helix-turn-helix domain CVS48_17580 PF00682 HMGL-like CVS48_17585 PF02515 CoA-transferase family III CVS48_17590 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_17610 PF00368 Hydroxymethylglutaryl-coenzyme A reductase CVS48_17615 PF00155 Aminotransferase class I and II CVS48_17615 PF00392 Bacterial regulatory proteins, gntR family CVS48_17625 PF03477 ATP cone domain CVS48_17625 PF13597 Anaerobic ribonucleoside-triphosphate reductase CVS48_17645 PF06628 Catalase-related immune-responsive CVS48_17645 PF18011 C-terminal domain found in long catalases CVS48_17645 PF00199 Catalase CVS48_17650 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_17660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_17660 PF03466 LysR substrate binding domain CVS48_17665 PF00873 AcrB/AcrD/AcrF family CVS48_17670 PF00873 AcrB/AcrD/AcrF family CVS48_17675 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CVS48_17690 PF03205 Molybdopterin guanine dinucleotide synthesis protein B CVS48_17695 PF05658 Head domain of trimeric autotransporter adhesin CVS48_17695 PF03895 YadA-like membrane anchor domain CVS48_17695 PF13018 Extended Signal Peptide of Type V secretion system CVS48_17695 PF05662 Coiled stalk of trimeric autotransporter adhesin CVS48_17705 PF00083 Sugar (and other) transporter CVS48_17705 PF07690 Major Facilitator Superfamily CVS48_17710 PF00850 Histone deacetylase domain CVS48_17715 PF03466 LysR substrate binding domain CVS48_17715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_17720 PF01053 Cys/Met metabolism PLP-dependent enzyme CVS48_17735 PF00582 Universal stress protein family CVS48_17740 PF03741 Integral membrane protein TerC family CVS48_17745 PF03466 LysR substrate binding domain CVS48_17745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_17750 PF07729 FCD domain CVS48_17750 PF00392 Bacterial regulatory proteins, gntR family CVS48_17755 PF00920 Dehydratase family CVS48_17760 PF03737 Aldolase/RraA CVS48_17765 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_17770 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_17775 PF13378 Enolase C-terminal domain-like CVS48_17775 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CVS48_17780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_17780 PF03466 LysR substrate binding domain CVS48_17795 PF17158 Membrane-associated sensor, integral membrane domain CVS48_17795 PF00990 Diguanylate cyclase, GGDEF domain CVS48_17810 PF03466 LysR substrate binding domain CVS48_17810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_17815 PF00884 Sulfatase CVS48_17820 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_17825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_17825 PF03466 LysR substrate binding domain CVS48_17830 PF01042 Endoribonuclease L-PSP CVS48_17845 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_17850 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CVS48_17850 PF01842 ACT domain CVS48_17850 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CVS48_17860 PF01070 FMN-dependent dehydrogenase CVS48_17875 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_17880 PF00497 Bacterial extracellular solute-binding proteins, family 3 CVS48_17885 PF00497 Bacterial extracellular solute-binding proteins, family 3 CVS48_17895 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_17910 PF01053 Cys/Met metabolism PLP-dependent enzyme CVS48_17920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_17920 PF03466 LysR substrate binding domain CVS48_17930 PF00990 Diguanylate cyclase, GGDEF domain CVS48_17930 PF17151 Periplasmic sensor domain CVS48_17945 PF00196 Bacterial regulatory proteins, luxR family CVS48_17945 PF00072 Response regulator receiver domain CVS48_17950 PF13426 PAS domain CVS48_17950 PF00512 His Kinase A (phospho-acceptor) domain CVS48_17950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_17950 PF00072 Response regulator receiver domain CVS48_17950 PF08448 PAS fold CVS48_17965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_17965 PF03466 LysR substrate binding domain CVS48_17970 PF01118 Semialdehyde dehydrogenase, NAD binding domain CVS48_17980 PF03466 LysR substrate binding domain CVS48_17980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_17985 PF00501 AMP-binding enzyme CVS48_17985 PF13193 AMP-binding enzyme C-terminal domain CVS48_17990 PF00083 Sugar (and other) transporter CVS48_18005 PF08534 Redoxin CVS48_18015 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_18020 PF00005 ABC transporter CVS48_18025 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase CVS48_18030 PF03971 Monomeric isocitrate dehydrogenase CVS48_18035 PF00585 C-terminal regulatory domain of Threonine dehydratase CVS48_18035 PF00291 Pyridoxal-phosphate dependent enzyme CVS48_18050 PF13609 Gram-negative porin CVS48_18055 PF00005 ABC transporter CVS48_18060 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_18065 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_18075 PF00497 Bacterial extracellular solute-binding proteins, family 3 CVS48_18080 PF00392 Bacterial regulatory proteins, gntR family CVS48_18085 PF00701 Dihydrodipicolinate synthetase family CVS48_18090 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_18095 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CVS48_18095 PF00072 Response regulator receiver domain CVS48_18095 PF01627 Hpt domain CVS48_18095 PF00512 His Kinase A (phospho-acceptor) domain CVS48_18095 PF00672 HAMP domain CVS48_18095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_18100 PF03705 CheR methyltransferase, all-alpha domain CVS48_18100 PF01739 CheR methyltransferase, SAM binding domain CVS48_18105 PF01339 CheB methylesterase CVS48_18110 PF00512 His Kinase A (phospho-acceptor) domain CVS48_18110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_18115 PF07715 TonB-dependent Receptor Plug Domain CVS48_18115 PF00593 TonB dependent receptor CVS48_18130 PF00171 Aldehyde dehydrogenase family CVS48_18135 PF08666 SAF domain CVS48_18135 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CVS48_18140 PF08450 SMP-30/Gluconolactonase/LRE-like region CVS48_18145 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_18160 PF07992 Pyridine nucleotide-disulphide oxidoreductase CVS48_18175 PF01979 Amidohydrolase family CVS48_18175 PF13382 Adenine deaminase C-terminal domain CVS48_18185 PF00857 Isochorismatase family CVS48_18200 PF04168 A predicted alpha-helical domain with a conserved ER motif. CVS48_18200 PF14403 Circularly permuted ATP-grasp type 2 CVS48_18205 PF01841 Transglutaminase-like superfamily CVS48_18205 PF08379 Bacterial transglutaminase-like N-terminal region CVS48_18210 PF15887 Putative zinc-binding metallo-peptidase CVS48_18210 PF10005 zinc-ribbon domain CVS48_18225 PF00171 Aldehyde dehydrogenase family CVS48_18230 PF07687 Peptidase dimerisation domain CVS48_18230 PF01546 Peptidase family M20/M25/M40 CVS48_18235 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CVS48_18235 PF00205 Thiamine pyrophosphate enzyme, central domain CVS48_18235 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CVS48_18245 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CVS48_18255 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CVS48_18255 PF03480 Bacterial extracellular solute-binding protein, family 7 CVS48_18265 PF00005 ABC transporter CVS48_18265 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS48_18270 PF00005 ABC transporter CVS48_18270 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS48_18275 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_18275 PF12911 N-terminal TM domain of oligopeptide transport permease C CVS48_18280 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_18285 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CVS48_18290 PF00392 Bacterial regulatory proteins, gntR family CVS48_18290 PF07729 FCD domain CVS48_18305 PF07859 alpha/beta hydrolase fold CVS48_18310 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS48_18310 PF00005 ABC transporter CVS48_18320 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_18325 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CVS48_18335 PF05378 Hydantoinase/oxoprolinase N-terminal region CVS48_18335 PF01968 Hydantoinase/oxoprolinase CVS48_18355 PF10518 TAT (twin-arginine translocation) pathway signal sequence CVS48_18355 PF00149 Calcineurin-like phosphoesterase CVS48_18360 PF07715 TonB-dependent Receptor Plug Domain CVS48_18360 PF00593 TonB dependent receptor CVS48_18365 PF00128 Alpha amylase, catalytic domain CVS48_18370 PF02446 4-alpha-glucanotransferase CVS48_18375 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CVS48_18375 PF00128 Alpha amylase, catalytic domain CVS48_18375 PF11941 Domain of unknown function (DUF3459) CVS48_18380 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CVS48_18380 PF00128 Alpha amylase, catalytic domain CVS48_18385 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CVS48_18385 PF00128 Alpha amylase, catalytic domain CVS48_18385 PF02806 Alpha amylase, C-terminal all-beta domain CVS48_18390 PF00128 Alpha amylase, catalytic domain CVS48_18390 PF16657 Maltogenic Amylase, C-terminal domain CVS48_18395 PF11896 Domain of unknown function (DUF3416) CVS48_18395 PF00128 Alpha amylase, catalytic domain CVS48_18400 PF00534 Glycosyl transferases group 1 CVS48_18400 PF08323 Starch synthase catalytic domain CVS48_18405 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CVS48_18405 PF00205 Thiamine pyrophosphate enzyme, central domain CVS48_18405 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CVS48_18430 PF13091 PLD-like domain CVS48_18435 PF03372 Endonuclease/Exonuclease/phosphatase family CVS48_18470 PF03746 LamB/YcsF family CVS48_18475 PF02682 Carboxyltransferase domain, subdomain C and D CVS48_18480 PF02785 Biotin carboxylase C-terminal domain CVS48_18480 PF00289 Biotin carboxylase, N-terminal domain CVS48_18480 PF00364 Biotin-requiring enzyme CVS48_18480 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CVS48_18485 PF02321 Outer membrane efflux protein CVS48_18490 PF13977 BetI-type transcriptional repressor, C-terminal CVS48_18490 PF00440 Bacterial regulatory proteins, tetR family CVS48_18495 PF13533 Biotin-lipoyl like CVS48_18500 PF00873 AcrB/AcrD/AcrF family CVS48_18505 PF01425 Amidase CVS48_18510 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_18515 PF00291 Pyridoxal-phosphate dependent enzyme CVS48_18520 PF03466 LysR substrate binding domain CVS48_18520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_18535 PF13649 Methyltransferase domain CVS48_18545 PF00690 Cation transporter/ATPase, N-terminus CVS48_18545 PF00689 Cation transporting ATPase, C-terminus CVS48_18550 PF00582 Universal stress protein family CVS48_18560 PF00753 Metallo-beta-lactamase superfamily CVS48_18560 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CVS48_18560 PF10996 Beta-Casp domain CVS48_18565 PF00571 CBS domain CVS48_18575 PF05231 MASE1 CVS48_18575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_18575 PF07730 Histidine kinase CVS48_18580 PF00072 Response regulator receiver domain CVS48_18580 PF00196 Bacterial regulatory proteins, luxR family CVS48_18585 PF13545 Crp-like helix-turn-helix domain CVS48_18585 PF00027 Cyclic nucleotide-binding domain CVS48_18595 PF02040 Arsenical pump membrane protein CVS48_18610 PF03960 ArsC family CVS48_18620 PF03358 NADPH-dependent FMN reductase CVS48_18625 PF00005 ABC transporter CVS48_18625 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS48_18630 PF00005 ABC transporter CVS48_18630 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS48_18640 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_18645 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CVS48_18655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_18655 PF03466 LysR substrate binding domain CVS48_18660 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_18665 PF01557 Fumarylacetoacetate (FAA) hydrolase family CVS48_18675 PF14759 Reductase C-terminal CVS48_18675 PF07992 Pyridine nucleotide-disulphide oxidoreductase CVS48_18680 PF00355 Rieske [2Fe-2S] domain CVS48_18685 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CVS48_18685 PF00355 Rieske [2Fe-2S] domain CVS48_18690 PF00866 Ring hydroxylating beta subunit CVS48_18700 PF02423 Ornithine cyclodeaminase/mu-crystallin family CVS48_18705 PF01557 Fumarylacetoacetate (FAA) hydrolase family CVS48_18730 PF00115 Cytochrome C and Quinol oxidase polypeptide I CVS48_18750 PF00149 Calcineurin-like phosphoesterase CVS48_18775 PF08494 DEAD/H associated CVS48_18775 PF00270 DEAD/DEAH box helicase CVS48_18775 PF00271 Helicase conserved C-terminal domain CVS48_18780 PF01068 ATP dependent DNA ligase domain CVS48_18780 PF04675 DNA ligase N terminus CVS48_18780 PF04679 ATP dependent DNA ligase C terminal region CVS48_18785 PF01068 ATP dependent DNA ligase domain CVS48_18785 PF04675 DNA ligase N terminus CVS48_18785 PF04679 ATP dependent DNA ligase C terminal region CVS48_18795 PF05401 Nodulation protein S (NodS) CVS48_18805 PF04679 ATP dependent DNA ligase C terminal region CVS48_18805 PF13298 DNA polymerase Ligase (LigD) CVS48_18805 PF01068 ATP dependent DNA ligase domain CVS48_18810 PF02735 Ku70/Ku80 beta-barrel domain CVS48_18815 PF13520 Amino acid permease CVS48_18825 PF02082 Transcriptional regulator CVS48_18840 PF17676 LD-carboxypeptidase C-terminal domain CVS48_18840 PF02016 LD-carboxypeptidase N-terminal domain CVS48_18845 PF01479 S4 domain CVS48_18845 PF00163 Ribosomal protein S4/S9 N-terminal domain CVS48_18865 PF00990 Diguanylate cyclase, GGDEF domain CVS48_18865 PF00072 Response regulator receiver domain CVS48_18870 PF13609 Gram-negative porin CVS48_18880 PF00440 Bacterial regulatory proteins, tetR family CVS48_18880 PF16925 Tetracyclin repressor-like, C-terminal domain CVS48_18890 PF01047 MarR family CVS48_18895 PF07690 Major Facilitator Superfamily CVS48_18905 PF07690 Major Facilitator Superfamily CVS48_18910 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CVS48_18910 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CVS48_18910 PF00378 Enoyl-CoA hydratase/isomerase CVS48_18925 PF00392 Bacterial regulatory proteins, gntR family CVS48_18925 PF00155 Aminotransferase class I and II CVS48_18935 PF02525 Flavodoxin-like fold CVS48_18950 PF03781 Sulfatase-modifying factor enzyme 1 CVS48_18955 PF03741 Integral membrane protein TerC family CVS48_18955 PF03471 Transporter associated domain CVS48_18965 PF13618 Gluconate 2-dehydrogenase subunit 3 CVS48_18970 PF00732 GMC oxidoreductase CVS48_18970 PF05199 GMC oxidoreductase CVS48_18975 PF00034 Cytochrome c CVS48_18990 PF17154 Gammaproteobacterial periplasmic sensor domain CVS48_18990 PF00563 EAL domain CVS48_18990 PF00990 Diguanylate cyclase, GGDEF domain CVS48_18990 PF00672 HAMP domain CVS48_19005 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CVS48_19005 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CVS48_19070 PF02954 Bacterial regulatory protein, Fis family CVS48_19070 PF00072 Response regulator receiver domain CVS48_19070 PF00158 Sigma-54 interaction domain CVS48_19075 PF02954 Bacterial regulatory protein, Fis family CVS48_19075 PF00158 Sigma-54 interaction domain CVS48_19080 PF04552 Sigma-54, DNA binding domain CVS48_19080 PF00309 Sigma-54 factor, Activator interacting domain (AID) CVS48_19080 PF04963 Sigma-54 factor, core binding domain CVS48_19090 PF08448 PAS fold CVS48_19090 PF13188 PAS domain CVS48_19090 PF00072 Response regulator receiver domain CVS48_19090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_19090 PF00512 His Kinase A (phospho-acceptor) domain CVS48_19100 PF05247 Flagellar transcriptional activator (FlhD) CVS48_19110 PF07690 Major Facilitator Superfamily CVS48_19115 PF03466 LysR substrate binding domain CVS48_19115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_19125 PF00990 Diguanylate cyclase, GGDEF domain CVS48_19125 PF01590 GAF domain CVS48_19125 PF00563 EAL domain CVS48_19125 PF00989 PAS fold CVS48_19130 PF00793 DAHP synthetase I family CVS48_19135 PF01266 FAD dependent oxidoreductase CVS48_19150 PF00072 Response regulator receiver domain CVS48_19150 PF00486 Transcriptional regulatory protein, C terminal CVS48_19155 PF03328 HpcH/HpaI aldolase/citrate lyase family CVS48_19160 PF12848 ABC transporter CVS48_19160 PF00005 ABC transporter CVS48_19165 PF02666 Phosphatidylserine decarboxylase CVS48_19170 PF01070 FMN-dependent dehydrogenase CVS48_19175 PF00149 Calcineurin-like phosphoesterase CVS48_19190 PF03180 NLPA lipoprotein CVS48_19195 PF00491 Arginase family CVS48_19200 PF09339 IclR helix-turn-helix domain CVS48_19200 PF01614 Bacterial transcriptional regulator CVS48_19210 PF00107 Zinc-binding dehydrogenase CVS48_19210 PF08240 Alcohol dehydrogenase GroES-like domain CVS48_19225 PF04241 Protein of unknown function (DUF423) CVS48_19230 PF00892 EamA-like transporter family CVS48_19240 PF07995 Glucose / Sorbosone dehydrogenase CVS48_19245 PF00043 Glutathione S-transferase, C-terminal domain CVS48_19245 PF02798 Glutathione S-transferase, N-terminal domain CVS48_19250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_19250 PF03466 LysR substrate binding domain CVS48_19255 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_19260 PF07969 Amidohydrolase family CVS48_19265 PF01177 Asp/Glu/Hydantoin racemase CVS48_19270 PF00005 ABC transporter CVS48_19275 PF00005 ABC transporter CVS48_19275 PF12399 Branched-chain amino acid ATP-binding cassette transporter CVS48_19280 PF11862 Domain of unknown function (DUF3382) CVS48_19280 PF02653 Branched-chain amino acid transport system / permease component CVS48_19285 PF02653 Branched-chain amino acid transport system / permease component CVS48_19290 PF13458 Periplasmic binding protein CVS48_19295 PF02592 Putative vitamin uptake transporter CVS48_19300 PF03807 NADP oxidoreductase coenzyme F420-dependent CVS48_19300 PF14748 Pyrroline-5-carboxylate reductase dimerisation CVS48_19305 PF13416 Bacterial extracellular solute-binding protein CVS48_19310 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_19315 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_19320 PF00005 ABC transporter CVS48_19320 PF17912 MalK OB fold domain CVS48_19325 PF13458 Periplasmic binding protein CVS48_19335 PF00109 Beta-ketoacyl synthase, N-terminal domain CVS48_19335 PF02801 Beta-ketoacyl synthase, C-terminal domain CVS48_19335 PF08659 KR domain CVS48_19335 PF00550 Phosphopantetheine attachment site CVS48_19335 PF08240 Alcohol dehydrogenase GroES-like domain CVS48_19335 PF00698 Acyl transferase domain CVS48_19335 PF14765 Polyketide synthase dehydratase CVS48_19335 PF16197 Ketoacyl-synthetase C-terminal extension CVS48_19340 PF00155 Aminotransferase class I and II CVS48_19345 PF00571 CBS domain CVS48_19345 PF01380 SIS domain CVS48_19350 PF05159 Capsule polysaccharide biosynthesis protein CVS48_19355 PF05159 Capsule polysaccharide biosynthesis protein CVS48_19365 PF00005 ABC transporter CVS48_19370 PF01061 ABC-2 type transporter CVS48_19375 PF10531 SLBB domain CVS48_19375 PF18412 Outer-membrane lipoprotein Wza C-terminal domain CVS48_19375 PF02563 Polysaccharide biosynthesis/export protein CVS48_19390 PF00106 short chain dehydrogenase CVS48_19395 PF00210 Ferritin-like domain CVS48_19400 PF03466 LysR substrate binding domain CVS48_19400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_19405 PF17191 RecG wedge domain CVS48_19405 PF00270 DEAD/DEAH box helicase CVS48_19405 PF00271 Helicase conserved C-terminal domain CVS48_19410 PF01042 Endoribonuclease L-PSP CVS48_19415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_19415 PF03466 LysR substrate binding domain CVS48_19430 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_19435 PF00970 Oxidoreductase FAD-binding domain CVS48_19435 PF00175 Oxidoreductase NAD-binding domain CVS48_19440 PF13416 Bacterial extracellular solute-binding protein CVS48_19445 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_19450 PF08402 TOBE domain CVS48_19450 PF00005 ABC transporter CVS48_19455 PF02678 Pirin CVS48_19455 PF05726 Pirin C-terminal cupin domain CVS48_19460 PF17954 Quercetinase C-terminal cupin domain CVS48_19460 PF02678 Pirin CVS48_19465 PF03466 LysR substrate binding domain CVS48_19465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_19470 PF00158 Sigma-54 interaction domain CVS48_19470 PF02954 Bacterial regulatory protein, Fis family CVS48_19470 PF00072 Response regulator receiver domain CVS48_19475 PF00989 PAS fold CVS48_19475 PF00512 His Kinase A (phospho-acceptor) domain CVS48_19475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_19485 PF04055 Radical SAM superfamily CVS48_19485 PF06969 HemN C-terminal domain CVS48_19490 PF01725 Ham1 family CVS48_19495 PF00563 EAL domain CVS48_19495 PF03707 Bacterial signalling protein N terminal repeat CVS48_19495 PF00990 Diguanylate cyclase, GGDEF domain CVS48_19505 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CVS48_19505 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CVS48_19505 PF02770 Acyl-CoA dehydrogenase, middle domain CVS48_19515 PF01138 3' exoribonuclease family, domain 1 CVS48_19515 PF03725 3' exoribonuclease family, domain 2 CVS48_19520 PF03755 YicC-like family, N-terminal region CVS48_19520 PF08340 Domain of unknown function (DUF1732) CVS48_19525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_19525 PF03466 LysR substrate binding domain CVS48_19530 PF00324 Amino acid permease CVS48_19535 PF01048 Phosphorylase superfamily CVS48_19535 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus CVS48_19545 PF00593 TonB dependent receptor CVS48_19545 PF07715 TonB-dependent Receptor Plug Domain CVS48_19550 PF00877 NlpC/P60 family CVS48_19560 PF00034 Cytochrome c CVS48_19565 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CVS48_19570 PF00625 Guanylate kinase CVS48_19575 PF01192 RNA polymerase Rpb6 CVS48_19580 PF04607 Region found in RelA / SpoT proteins CVS48_19580 PF02824 TGS domain CVS48_19580 PF13291 ACT domain CVS48_19585 PF00005 ABC transporter CVS48_19590 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_19595 PF00497 Bacterial extracellular solute-binding proteins, family 3 CVS48_19605 PF05378 Hydantoinase/oxoprolinase N-terminal region CVS48_19605 PF01968 Hydantoinase/oxoprolinase CVS48_19615 PF00293 NUDIX domain CVS48_19615 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain CVS48_19615 PF09297 NADH pyrophosphatase zinc ribbon domain CVS48_19630 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CVS48_19635 PF13609 Gram-negative porin CVS48_19640 PF07286 Protein of unknown function (DUF1445) CVS48_19645 PF01425 Amidase CVS48_19655 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CVS48_19670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_19670 PF03466 LysR substrate binding domain CVS48_19680 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase CVS48_19680 PF12241 Trans-2-enoyl-CoA reductase catalytic region CVS48_19680 PF07055 Enoyl reductase FAD binding domain CVS48_19695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_19695 PF03466 LysR substrate binding domain CVS48_19700 PF08402 TOBE domain CVS48_19700 PF00005 ABC transporter CVS48_19705 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_19715 PF00005 ABC transporter CVS48_19720 PF13472 GDSL-like Lipase/Acylhydrolase family CVS48_19725 PF13145 PPIC-type PPIASE domain CVS48_19730 PF03009 Glycerophosphoryl diester phosphodiesterase family CVS48_19735 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ CVS48_19750 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CVS48_19750 PF07992 Pyridine nucleotide-disulphide oxidoreductase CVS48_19755 PF00462 Glutaredoxin CVS48_19755 PF08534 Redoxin CVS48_19765 PF00403 Heavy-metal-associated domain CVS48_19770 PF00376 MerR family regulatory protein CVS48_19770 PF09278 MerR, DNA binding CVS48_19775 PF05958 tRNA (Uracil-5-)-methyltransferase CVS48_19780 PF07690 Major Facilitator Superfamily CVS48_19785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_19785 PF03466 LysR substrate binding domain CVS48_19810 PF01476 LysM domain CVS48_19810 PF01551 Peptidase family M23 CVS48_19820 PF01975 Survival protein SurE CVS48_19825 PF02660 Glycerol-3-phosphate acyltransferase CVS48_19830 PF00814 Glycoprotease family CVS48_19835 PF00860 Permease family CVS48_19845 PF00296 Luciferase-like monooxygenase CVS48_19850 PF00085 Thioredoxin CVS48_19855 PF01205 Uncharacterized protein family UPF0029 CVS48_19870 PF09084 NMT1/THI5 like CVS48_19875 PF00005 ABC transporter CVS48_19880 PF12848 ABC transporter CVS48_19880 PF00005 ABC transporter CVS48_19885 PF02016 LD-carboxypeptidase N-terminal domain CVS48_19885 PF17676 LD-carboxypeptidase C-terminal domain CVS48_19890 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CVS48_19910 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) CVS48_19915 PF01899 Na+/H+ ion antiporter subunit CVS48_19920 PF00361 Proton-conducting membrane transporter CVS48_19925 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CVS48_19930 PF00361 Proton-conducting membrane transporter CVS48_19930 PF13244 Domain of unknown function (DUF4040) CVS48_19930 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CVS48_19930 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter CVS48_19935 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_19955 PF00149 Calcineurin-like phosphoesterase CVS48_19955 PF12320 Type 5 capsule protein repressor C-terminal domain CVS48_19960 PF01266 FAD dependent oxidoreductase CVS48_19965 PF01037 Lrp/AsnC ligand binding domain CVS48_19990 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CVS48_19990 PF02770 Acyl-CoA dehydrogenase, middle domain CVS48_19990 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CVS48_19995 PF13192 Thioredoxin domain CVS48_19995 PF07992 Pyridine nucleotide-disulphide oxidoreductase CVS48_20015 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_20020 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_20025 PF00005 ABC transporter CVS48_20025 PF17912 MalK OB fold domain CVS48_20030 PF00005 ABC transporter CVS48_20030 PF17912 MalK OB fold domain CVS48_20040 PF01266 FAD dependent oxidoreductase CVS48_20040 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CVS48_20045 PF00072 Response regulator receiver domain CVS48_20045 PF01966 HD domain CVS48_20055 PF16884 N-terminal domain of oxidoreductase CVS48_20055 PF00107 Zinc-binding dehydrogenase CVS48_20060 PF13977 BetI-type transcriptional repressor, C-terminal CVS48_20060 PF00440 Bacterial regulatory proteins, tetR family CVS48_20070 PF00005 ABC transporter CVS48_20090 PF04073 Aminoacyl-tRNA editing domain CVS48_20120 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CVS48_20130 PF00472 RF-1 domain CVS48_20140 PF01242 6-pyruvoyl tetrahydropterin synthase CVS48_20155 PF07869 Protein of unknown function (DUF1656) CVS48_20160 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CVS48_20160 PF00529 HlyD membrane-fusion protein of T1SS CVS48_20165 PF02321 Outer membrane efflux protein CVS48_20175 PF00205 Thiamine pyrophosphate enzyme, central domain CVS48_20175 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CVS48_20175 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CVS48_20180 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_20195 PF02230 Phospholipase/Carboxylesterase CVS48_20200 PF00324 Amino acid permease CVS48_20215 PF02811 PHP domain CVS48_20215 PF14579 Helix-hairpin-helix motif CVS48_20215 PF07733 Bacterial DNA polymerase III alpha NTPase domain CVS48_20215 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CVS48_20230 PF00005 ABC transporter CVS48_20235 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_20240 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_20245 PF00497 Bacterial extracellular solute-binding proteins, family 3 CVS48_20255 PF03737 Aldolase/RraA CVS48_20275 PF06983 3-demethylubiquinone-9 3-methyltransferase CVS48_20280 PF01614 Bacterial transcriptional regulator CVS48_20280 PF09339 IclR helix-turn-helix domain CVS48_20285 PF00732 GMC oxidoreductase CVS48_20285 PF05199 GMC oxidoreductase CVS48_20290 PF00083 Sugar (and other) transporter CVS48_20295 PF02321 Outer membrane efflux protein CVS48_20300 PF00873 AcrB/AcrD/AcrF family CVS48_20305 PF00529 HlyD membrane-fusion protein of T1SS CVS48_20305 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CVS48_20315 PF00248 Aldo/keto reductase family CVS48_20325 PF00266 Aminotransferase class-V CVS48_20330 PF00392 Bacterial regulatory proteins, gntR family CVS48_20330 PF07729 FCD domain CVS48_20335 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CVS48_20340 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_20345 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_20345 PF12911 N-terminal TM domain of oligopeptide transport permease C CVS48_20350 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS48_20350 PF00005 ABC transporter CVS48_20355 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS48_20355 PF00005 ABC transporter CVS48_20365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_20365 PF03466 LysR substrate binding domain CVS48_20380 PF00440 Bacterial regulatory proteins, tetR family CVS48_20395 PF04463 Protein of unknown function (DUF523) CVS48_20405 PF12833 Helix-turn-helix domain CVS48_20405 PF02311 AraC-like ligand binding domain CVS48_20415 PF01618 MotA/TolQ/ExbB proton channel family CVS48_20420 PF00691 OmpA family CVS48_20420 PF13677 Membrane MotB of proton-channel complex MotA/MotB CVS48_20425 PF03795 YCII-related domain CVS48_20435 PF01850 PIN domain CVS48_20440 PF03795 YCII-related domain CVS48_20450 PF04542 Sigma-70 region 2 CVS48_20450 PF08281 Sigma-70, region 4 CVS48_20460 PF00892 EamA-like transporter family CVS48_20470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_20470 PF03466 LysR substrate binding domain CVS48_20480 PF00665 Integrase core domain CVS48_20485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_20485 PF03466 LysR substrate binding domain CVS48_20500 PF01047 MarR family CVS48_20510 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CVS48_20520 PF03480 Bacterial extracellular solute-binding protein, family 7 CVS48_20545 PF00691 OmpA family CVS48_20545 PF13488 Glycine zipper CVS48_20565 PF00557 Metallopeptidase family M24 CVS48_20575 PF13417 Glutathione S-transferase, N-terminal domain CVS48_20575 PF00043 Glutathione S-transferase, C-terminal domain CVS48_20580 PF00080 Copper/zinc superoxide dismutase (SODC) CVS48_20585 PF04286 Protein of unknown function (DUF445) CVS48_20590 PF01594 AI-2E family transporter CVS48_20595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_20595 PF03466 LysR substrate binding domain CVS48_20600 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CVS48_20600 PF00378 Enoyl-CoA hydratase/isomerase CVS48_20600 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CVS48_20605 PF00108 Thiolase, N-terminal domain CVS48_20605 PF02803 Thiolase, C-terminal domain CVS48_20610 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CVS48_20610 PF02770 Acyl-CoA dehydrogenase, middle domain CVS48_20610 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CVS48_20615 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CVS48_20615 PF02770 Acyl-CoA dehydrogenase, middle domain CVS48_20615 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CVS48_20620 PF13193 AMP-binding enzyme C-terminal domain CVS48_20620 PF00501 AMP-binding enzyme CVS48_20625 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_20630 PF03466 LysR substrate binding domain CVS48_20630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_20635 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_20640 PF01546 Peptidase family M20/M25/M40 CVS48_20640 PF07687 Peptidase dimerisation domain CVS48_20650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_20650 PF03466 LysR substrate binding domain CVS48_20655 PF07690 Major Facilitator Superfamily CVS48_20660 PF01053 Cys/Met metabolism PLP-dependent enzyme CVS48_20665 PF00563 EAL domain CVS48_20665 PF00360 Phytochrome region CVS48_20665 PF00990 Diguanylate cyclase, GGDEF domain CVS48_20665 PF01590 GAF domain CVS48_20670 PF01339 CheB methylesterase CVS48_20670 PF00072 Response regulator receiver domain CVS48_20675 PF01627 Hpt domain CVS48_20675 PF01584 CheW-like domain CVS48_20675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_20675 PF00072 Response regulator receiver domain CVS48_20685 PF01739 CheR methyltransferase, SAM binding domain CVS48_20690 PF01584 CheW-like domain CVS48_20695 PF00672 HAMP domain CVS48_20695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CVS48_20695 PF02743 Cache domain CVS48_20700 PF01425 Amidase CVS48_20705 PF03466 LysR substrate binding domain CVS48_20705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_20710 PF07690 Major Facilitator Superfamily CVS48_20720 PF18081 Fanconi anemia-associated nuclease SAP domain CVS48_20720 PF08774 VRR-NUC domain CVS48_20730 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CVS48_20730 PF00034 Cytochrome c CVS48_20735 PF05199 GMC oxidoreductase CVS48_20735 PF00732 GMC oxidoreductase CVS48_20740 PF13618 Gluconate 2-dehydrogenase subunit 3 CVS48_20765 PF12706 Beta-lactamase superfamily domain CVS48_20775 PF01361 Tautomerase enzyme CVS48_20785 PF03459 TOBE domain CVS48_20785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_20790 PF00011 Hsp20/alpha crystallin family CVS48_20795 PF00011 Hsp20/alpha crystallin family CVS48_20800 PF00106 short chain dehydrogenase CVS48_20805 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CVS48_20820 PF02028 BCCT, betaine/carnitine/choline family transporter CVS48_20825 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CVS48_20825 PF00355 Rieske [2Fe-2S] domain CVS48_20830 PF00175 Oxidoreductase NAD-binding domain CVS48_20830 PF00111 2Fe-2S iron-sulfur cluster binding domain CVS48_20830 PF00970 Oxidoreductase FAD-binding domain CVS48_20835 PF00005 ABC transporter CVS48_20835 PF00664 ABC transporter transmembrane region CVS48_20865 PF00106 short chain dehydrogenase CVS48_20870 PF00043 Glutathione S-transferase, C-terminal domain CVS48_20870 PF02798 Glutathione S-transferase, N-terminal domain CVS48_20880 PF00561 alpha/beta hydrolase fold CVS48_20885 PF13411 MerR HTH family regulatory protein CVS48_20900 PF03466 LysR substrate binding domain CVS48_20900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_20905 PF03358 NADPH-dependent FMN reductase CVS48_20915 PF01717 Cobalamin-independent synthase, Catalytic domain CVS48_20915 PF08267 Cobalamin-independent synthase, N-terminal domain CVS48_20920 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_20930 PF00958 GMP synthase C terminal domain CVS48_20930 PF00117 Glutamine amidotransferase class-I CVS48_20930 PF02540 NAD synthase CVS48_20935 PF00571 CBS domain CVS48_20935 PF00478 IMP dehydrogenase / GMP reductase domain CVS48_20955 PF03466 LysR substrate binding domain CVS48_20955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_20960 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_20965 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CVS48_20965 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CVS48_20985 PF00111 2Fe-2S iron-sulfur cluster binding domain CVS48_20990 PF00484 Carbonic anhydrase CVS48_21005 PF03466 LysR substrate binding domain CVS48_21005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_21010 PF13454 FAD-NAD(P)-binding CVS48_21015 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_21020 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_21020 PF12911 N-terminal TM domain of oligopeptide transport permease C CVS48_21025 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS48_21025 PF00005 ABC transporter CVS48_21030 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS48_21030 PF00005 ABC transporter CVS48_21035 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CVS48_21065 PF00005 ABC transporter CVS48_21075 PF00271 Helicase conserved C-terminal domain CVS48_21080 PF14130 Domain of unknown function (DUF4297) CVS48_21080 PF08878 Domain of unknown function (DUF1837) CVS48_21085 PF00872 Transposase, Mutator family CVS48_21090 PF09339 IclR helix-turn-helix domain CVS48_21090 PF01614 Bacterial transcriptional regulator CVS48_21095 PF01613 Flavin reductase like domain CVS48_21100 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_21105 PF01042 Endoribonuclease L-PSP CVS48_21110 PF04909 Amidohydrolase CVS48_21115 PF01557 Fumarylacetoacetate (FAA) hydrolase family CVS48_21120 PF01557 Fumarylacetoacetate (FAA) hydrolase family CVS48_21125 PF03328 HpcH/HpaI aldolase/citrate lyase family CVS48_21135 PF00857 Isochorismatase family CVS48_21205 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CVS48_21215 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_21220 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CVS48_21230 PF03480 Bacterial extracellular solute-binding protein, family 7 CVS48_21270 PF03466 LysR substrate binding domain CVS48_21270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_21280 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_21285 PF00672 HAMP domain CVS48_21285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CVS48_21285 PF02203 Tar ligand binding domain homologue CVS48_21290 PF03466 LysR substrate binding domain CVS48_21290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_21295 PF02769 AIR synthase related protein, C-terminal domain CVS48_21295 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CVS48_21295 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal CVS48_21305 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CVS48_21310 PF03480 Bacterial extracellular solute-binding protein, family 7 CVS48_21315 PF01272 Transcription elongation factor, GreA/GreB, C-term CVS48_21315 PF03449 Transcription elongation factor, N-terminal CVS48_21320 PF02811 PHP domain CVS48_21325 PF12697 Alpha/beta hydrolase family CVS48_21335 PF05199 GMC oxidoreductase CVS48_21335 PF00732 GMC oxidoreductase CVS48_21340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_21340 PF03466 LysR substrate binding domain CVS48_21345 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_21350 PF01266 FAD dependent oxidoreductase CVS48_21370 PF07992 Pyridine nucleotide-disulphide oxidoreductase CVS48_21370 PF18267 Rubredoxin NAD+ reductase C-terminal domain CVS48_21370 PF13806 Rieske-like [2Fe-2S] domain CVS48_21370 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CVS48_21370 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CVS48_21370 PF04324 BFD-like [2Fe-2S] binding domain CVS48_21375 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CVS48_21375 PF18267 Rubredoxin NAD+ reductase C-terminal domain CVS48_21375 PF13806 Rieske-like [2Fe-2S] domain CVS48_21375 PF04324 BFD-like [2Fe-2S] binding domain CVS48_21375 PF07992 Pyridine nucleotide-disulphide oxidoreductase CVS48_21375 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CVS48_21380 PF01226 Formate/nitrite transporter CVS48_21385 PF00069 Protein kinase domain CVS48_21395 PF08376 Nitrate and nitrite sensing CVS48_21395 PF03861 ANTAR domain CVS48_21400 PF07690 Major Facilitator Superfamily CVS48_21405 PF01047 MarR family CVS48_21410 PF00356 Bacterial regulatory proteins, lacI family CVS48_21415 PF03480 Bacterial extracellular solute-binding protein, family 7 CVS48_21420 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CVS48_21430 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain CVS48_21430 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain CVS48_21435 PF07005 Sugar-binding N-terminal domain CVS48_21435 PF17042 Nucleotide-binding C-terminal domain CVS48_21450 PF13332 Hemagglutinin repeat CVS48_21450 PF05860 haemagglutination activity domain CVS48_21450 PF04829 Pre-toxin domain with VENN motif CVS48_21450 PF13018 Extended Signal Peptide of Type V secretion system CVS48_21450 PF13018 Extended Signal Peptide of Type V secretion system CVS48_21450 PF04829 Pre-toxin domain with VENN motif CVS48_21450 PF13332 Hemagglutinin repeat CVS48_21450 PF05860 haemagglutination activity domain CVS48_21455 PF08479 POTRA domain, ShlB-type CVS48_21455 PF17287 POTRA domain CVS48_21455 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CVS48_21465 PF00271 Helicase conserved C-terminal domain CVS48_21480 PF18273 Type III R-M EcoP15I C-terminal domain CVS48_21480 PF01555 DNA methylase CVS48_21535 PF03466 LysR substrate binding domain CVS48_21535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_21540 PF00795 Carbon-nitrogen hydrolase CVS48_21545 PF03737 Aldolase/RraA CVS48_21550 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_21595 PF08721 TnsA endonuclease C terminal CVS48_21595 PF08722 TnsA endonuclease N terminal CVS48_21600 PF00665 Integrase core domain CVS48_21605 PF11426 Tn7 transposition regulator TnsC CVS48_21605 PF13401 AAA domain CVS48_21655 PF01381 Helix-turn-helix CVS48_21685 PF00356 Bacterial regulatory proteins, lacI family CVS48_21700 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_21710 PF03466 LysR substrate binding domain CVS48_21710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_21715 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_21720 PF02585 GlcNAc-PI de-N-acetylase CVS48_21725 PF03737 Aldolase/RraA CVS48_21735 PF02110 Hydroxyethylthiazole kinase family CVS48_21740 PF07690 Major Facilitator Superfamily CVS48_21745 PF00005 ABC transporter CVS48_21750 PF01032 FecCD transport family CVS48_21760 PF01497 Periplasmic binding protein CVS48_21765 PF00593 TonB dependent receptor CVS48_21765 PF07715 TonB-dependent Receptor Plug Domain CVS48_21770 PF00486 Transcriptional regulatory protein, C terminal CVS48_21770 PF00072 Response regulator receiver domain CVS48_21775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_21775 PF00512 His Kinase A (phospho-acceptor) domain CVS48_21775 PF16750 Sensor domain of 2-component histidine kinase CVS48_21775 PF00672 HAMP domain CVS48_21780 PF07715 TonB-dependent Receptor Plug Domain CVS48_21780 PF00593 TonB dependent receptor CVS48_21790 PF00005 ABC transporter CVS48_21795 PF12704 MacB-like periplasmic core domain CVS48_21795 PF02687 FtsX-like permease family CVS48_21805 PF01368 DHH family CVS48_21805 PF17768 RecJ OB domain CVS48_21805 PF02272 DHHA1 domain CVS48_21815 PF00106 short chain dehydrogenase CVS48_21820 PF01336 OB-fold nucleic acid binding domain CVS48_21820 PF00152 tRNA synthetases class II (D, K and N) CVS48_21830 PF00440 Bacterial regulatory proteins, tetR family CVS48_21830 PF17932 Tetracyclin repressor-like, C-terminal domain CVS48_21835 PF00108 Thiolase, N-terminal domain CVS48_21835 PF02803 Thiolase, C-terminal domain CVS48_21840 PF00501 AMP-binding enzyme CVS48_21845 PF00005 ABC transporter CVS48_21855 PF02653 Branched-chain amino acid transport system / permease component CVS48_21865 PF00005 ABC transporter CVS48_21865 PF12399 Branched-chain amino acid ATP-binding cassette transporter CVS48_21870 PF00378 Enoyl-CoA hydratase/isomerase CVS48_21875 PF00378 Enoyl-CoA hydratase/isomerase CVS48_21880 PF02515 CoA-transferase family III CVS48_21885 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_21890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_21890 PF03466 LysR substrate binding domain CVS48_21895 PF02142 MGS-like domain CVS48_21900 PF04384 Iron-sulphur cluster assembly CVS48_21905 PF00111 2Fe-2S iron-sulfur cluster binding domain CVS48_21910 PF00012 Hsp70 protein CVS48_21915 PF07743 HSCB C-terminal oligomerisation domain CVS48_21920 PF01521 Iron-sulphur cluster biosynthesis CVS48_21925 PF01592 NifU-like N terminal domain CVS48_21930 PF00266 Aminotransferase class-V CVS48_21935 PF02082 Transcriptional regulator CVS48_21940 PF01451 Low molecular weight phosphotyrosine protein phosphatase CVS48_21945 PF12344 Ultra-violet resistance protein B CVS48_21945 PF00271 Helicase conserved C-terminal domain CVS48_21945 PF02151 UvrB/uvrC motif CVS48_21945 PF17757 UvrB interaction domain CVS48_21945 PF04851 Type III restriction enzyme, res subunit CVS48_21950 PF00155 Aminotransferase class I and II CVS48_21955 PF01726 LexA DNA binding domain CVS48_21955 PF00717 Peptidase S24-like CVS48_21960 PF02190 ATP-dependent protease La (LON) substrate-binding domain CVS48_21960 PF05362 Lon protease (S16) C-terminal proteolytic domain CVS48_21960 PF00004 ATPase family associated with various cellular activities (AAA) CVS48_21965 PF06689 ClpX C4-type zinc finger CVS48_21965 PF10431 C-terminal, D2-small domain, of ClpB protein CVS48_21965 PF07724 AAA domain (Cdc48 subfamily) CVS48_21970 PF00574 Clp protease CVS48_21975 PF05697 Bacterial trigger factor protein (TF) CVS48_21975 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CVS48_21975 PF05698 Bacterial trigger factor protein (TF) C-terminus CVS48_21980 PF01435 Peptidase family M48 CVS48_21985 PF03350 Uncharacterized protein family, UPF0114 CVS48_21990 PF00313 'Cold-shock' DNA-binding domain CVS48_22005 PF00313 'Cold-shock' DNA-binding domain CVS48_22030 PF01168 Alanine racemase, N-terminal domain CVS48_22030 PF14031 Putative serine dehydratase domain CVS48_22035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_22035 PF03466 LysR substrate binding domain CVS48_22050 PF00440 Bacterial regulatory proteins, tetR family CVS48_22055 PF07690 Major Facilitator Superfamily CVS48_22070 PF02470 MlaD protein CVS48_22075 PF00583 Acetyltransferase (GNAT) family CVS48_22085 PF00793 DAHP synthetase I family CVS48_22100 PF01565 FAD binding domain CVS48_22100 PF02913 FAD linked oxidases, C-terminal domain CVS48_22105 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CVS48_22105 PF01266 FAD dependent oxidoreductase CVS48_22110 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CVS48_22110 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CVS48_22115 PF07690 Major Facilitator Superfamily CVS48_22140 PF03466 LysR substrate binding domain CVS48_22140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_22145 PF02515 CoA-transferase family III CVS48_22150 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CVS48_22150 PF00378 Enoyl-CoA hydratase/isomerase CVS48_22150 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CVS48_22155 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_22170 PF00155 Aminotransferase class I and II CVS48_22175 PF00132 Bacterial transferase hexapeptide (six repeats) CVS48_22175 PF14602 Hexapeptide repeat of succinyl-transferase CVS48_22175 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CVS48_22180 PF01546 Peptidase family M20/M25/M40 CVS48_22180 PF07687 Peptidase dimerisation domain CVS48_22185 PF05175 Methyltransferase small domain CVS48_22190 PF00005 ABC transporter CVS48_22190 PF12848 ABC transporter CVS48_22205 PF07715 TonB-dependent Receptor Plug Domain CVS48_22210 PF03150 Di-haem cytochrome c peroxidase CVS48_22220 PF13361 UvrD-like helicase C-terminal domain CVS48_22220 PF00580 UvrD/REP helicase N-terminal domain CVS48_22235 PF01029 NusB family CVS48_22235 PF01189 16S rRNA methyltransferase RsmB/F CVS48_22240 PF00551 Formyl transferase CVS48_22245 PF06574 FAD synthetase CVS48_22245 PF01687 Riboflavin kinase CVS48_22250 PF06827 Zinc finger found in FPG and IleRS CVS48_22250 PF00133 tRNA synthetases class I (I, L, M and V) CVS48_22250 PF08264 Anticodon-binding domain of tRNA CVS48_22255 PF01252 Signal peptidase (SPase) II CVS48_22260 PF04127 DNA / pantothenate metabolism flavoprotein CVS48_22260 PF02441 Flavoprotein CVS48_22270 PF03575 Peptidase family S51 CVS48_22300 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CVS48_22305 PF00005 ABC transporter CVS48_22310 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_22315 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_22320 PF00497 Bacterial extracellular solute-binding proteins, family 3 CVS48_22330 PF02566 OsmC-like protein CVS48_22335 PF01566 Natural resistance-associated macrophage protein CVS48_22350 PF07690 Major Facilitator Superfamily CVS48_22355 PF00005 ABC transporter CVS48_22360 PF00005 ABC transporter CVS48_22360 PF12399 Branched-chain amino acid ATP-binding cassette transporter CVS48_22365 PF11862 Domain of unknown function (DUF3382) CVS48_22365 PF02653 Branched-chain amino acid transport system / permease component CVS48_22370 PF02653 Branched-chain amino acid transport system / permease component CVS48_22375 PF13458 Periplasmic binding protein CVS48_22380 PF01619 Proline dehydrogenase CVS48_22380 PF00171 Aldehyde dehydrogenase family CVS48_22380 PF14850 DNA-binding domain of Proline dehydrogenase CVS48_22380 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CVS48_22390 PF02470 MlaD protein CVS48_22395 PF04403 Paraquat-inducible protein A CVS48_22400 PF10431 C-terminal, D2-small domain, of ClpB protein CVS48_22400 PF07724 AAA domain (Cdc48 subfamily) CVS48_22400 PF17871 AAA lid domain CVS48_22400 PF02861 Clp amino terminal domain, pathogenicity island component CVS48_22400 PF00004 ATPase family associated with various cellular activities (AAA) CVS48_22405 PF00912 Transglycosylase CVS48_22405 PF06832 Penicillin-Binding Protein C-terminus Family CVS48_22405 PF00905 Penicillin binding protein transpeptidase domain CVS48_22410 PF00207 Alpha-2-macroglobulin family CVS48_22410 PF01835 MG2 domain CVS48_22410 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain CVS48_22410 PF07703 Alpha-2-macroglobulin bait region domain CVS48_22410 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain CVS48_22410 PF17962 Bacterial macroglobulin domain 6 CVS48_22410 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain CVS48_22410 PF11974 Bacterial alpha-2-macroglobulin MG3 domain CVS48_22415 PF02617 ATP-dependent Clp protease adaptor protein ClpS CVS48_22420 PF00313 'Cold-shock' DNA-binding domain CVS48_22430 PF00108 Thiolase, N-terminal domain CVS48_22430 PF02803 Thiolase, C-terminal domain CVS48_22435 PF00654 Voltage gated chloride channel CVS48_22445 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CVS48_22445 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CVS48_22450 PF02601 Exonuclease VII, large subunit CVS48_22450 PF13742 OB-fold nucleic acid binding domain CVS48_22455 PF01618 MotA/TolQ/ExbB proton channel family CVS48_22465 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CVS48_22470 PF03966 Trm112p-like protein CVS48_22475 PF02348 Cytidylyltransferase CVS48_22480 PF05191 Adenylate kinase, active site lid CVS48_22485 PF00106 short chain dehydrogenase CVS48_22490 PF03023 Lipid II flippase MurJ CVS48_22500 PF01649 Ribosomal protein S20 CVS48_22505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_22505 PF03466 LysR substrate binding domain CVS48_22510 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CVS48_22510 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CVS48_22520 PF03328 HpcH/HpaI aldolase/citrate lyase family CVS48_22525 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_22530 PF02615 Malate/L-lactate dehydrogenase CVS48_22535 PF00392 Bacterial regulatory proteins, gntR family CVS48_22535 PF07729 FCD domain CVS48_22545 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_22550 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_22555 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CVS48_22555 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CVS48_22570 PF18073 Rubredoxin metal binding domain CVS48_22585 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CVS48_22590 PF00171 Aldehyde dehydrogenase family CVS48_22595 PF01557 Fumarylacetoacetate (FAA) hydrolase family CVS48_22600 PF01557 Fumarylacetoacetate (FAA) hydrolase family CVS48_22605 PF01557 Fumarylacetoacetate (FAA) hydrolase family CVS48_22610 PF03328 HpcH/HpaI aldolase/citrate lyase family CVS48_22620 PF00842 Alanine racemase, C-terminal domain CVS48_22620 PF01168 Alanine racemase, N-terminal domain CVS48_22640 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CVS48_22660 PF02424 ApbE family CVS48_22665 PF00175 Oxidoreductase NAD-binding domain CVS48_22665 PF00258 Flavodoxin CVS48_22665 PF00667 FAD binding domain CVS48_22675 PF07969 Amidohydrolase family CVS48_22680 PF03466 LysR substrate binding domain CVS48_22680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_22685 PF09370 Phosphoenolpyruvate hydrolase-like CVS48_22705 PF10431 C-terminal, D2-small domain, of ClpB protein CVS48_22705 PF02861 Clp amino terminal domain, pathogenicity island component CVS48_22705 PF17871 AAA lid domain CVS48_22705 PF07724 AAA domain (Cdc48 subfamily) CVS48_22705 PF00004 ATPase family associated with various cellular activities (AAA) CVS48_22715 PF00027 Cyclic nucleotide-binding domain CVS48_22715 PF13545 Crp-like helix-turn-helix domain CVS48_22750 PF00293 NUDIX domain CVS48_22755 PF00012 Hsp70 protein CVS48_22775 PF12843 Putative quorum-sensing-regulated virulence factor CVS48_22795 PF03069 Acetamidase/Formamidase family CVS48_22810 PF13404 AsnC-type helix-turn-helix domain CVS48_22810 PF01037 Lrp/AsnC ligand binding domain CVS48_22815 PF12848 ABC transporter CVS48_22815 PF00005 ABC transporter CVS48_22825 PF00005 ABC transporter CVS48_22825 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS48_22830 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CVS48_22835 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_22840 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_22840 PF12911 N-terminal TM domain of oligopeptide transport permease C CVS48_22850 PF13673 Acetyltransferase (GNAT) domain CVS48_22865 PF13406 Transglycosylase SLT domain CVS48_22870 PF01554 MatE CVS48_22885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_22885 PF03466 LysR substrate binding domain CVS48_22890 PF00962 Adenosine/AMP deaminase CVS48_22895 PF00135 Carboxylesterase family CVS48_22900 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_22905 PF01546 Peptidase family M20/M25/M40 CVS48_22905 PF07687 Peptidase dimerisation domain CVS48_22910 PF03447 Homoserine dehydrogenase, NAD binding domain CVS48_22910 PF01958 Domain of unknown function DUF108 CVS48_22915 PF06472 ABC transporter transmembrane region 2 CVS48_22915 PF00005 ABC transporter CVS48_22925 PF04909 Amidohydrolase CVS48_22930 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_22935 PF01479 S4 domain CVS48_22950 PF03976 Polyphosphate kinase 2 (PPK2) CVS48_22975 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS48_22975 PF00005 ABC transporter CVS48_22980 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS48_22980 PF00005 ABC transporter CVS48_22985 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_22985 PF12911 N-terminal TM domain of oligopeptide transport permease C CVS48_22995 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CVS48_23000 PF01546 Peptidase family M20/M25/M40 CVS48_23000 PF07687 Peptidase dimerisation domain CVS48_23005 PF07690 Major Facilitator Superfamily CVS48_23010 PF12833 Helix-turn-helix domain CVS48_23010 PF06445 GyrI-like small molecule binding domain CVS48_23020 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CVS48_23020 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CVS48_23025 PF00144 Beta-lactamase CVS48_23030 PF01266 FAD dependent oxidoreductase CVS48_23035 PF01476 LysM domain CVS48_23035 PF01551 Peptidase family M23 CVS48_23045 PF08031 Berberine and berberine like CVS48_23045 PF01565 FAD binding domain CVS48_23050 PF12833 Helix-turn-helix domain CVS48_23050 PF02805 Metal binding domain of Ada CVS48_23060 PF18029 Glyoxalase-like domain CVS48_23070 PF10503 Esterase PHB depolymerase CVS48_23075 PF03006 Haemolysin-III related CVS48_23095 PF01061 ABC-2 type transporter CVS48_23100 PF00005 ABC transporter CVS48_23105 PF00701 Dihydrodipicolinate synthetase family CVS48_23110 PF13378 Enolase C-terminal domain-like CVS48_23110 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CVS48_23115 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CVS48_23120 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_23125 PF03466 LysR substrate binding domain CVS48_23125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_23130 PF08274 PhnA Zinc-Ribbon CVS48_23130 PF03831 PhnA domain CVS48_23145 PF12801 4Fe-4S binding domain CVS48_23145 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase CVS48_23145 PF13746 4Fe-4S dicluster domain CVS48_23165 PF00115 Cytochrome C and Quinol oxidase polypeptide I CVS48_23180 PF00202 Aminotransferase class-III CVS48_23185 PF00155 Aminotransferase class I and II CVS48_23195 PF13649 Methyltransferase domain CVS48_23200 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH CVS48_23205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_23205 PF03466 LysR substrate binding domain CVS48_23210 PF08240 Alcohol dehydrogenase GroES-like domain CVS48_23210 PF00107 Zinc-binding dehydrogenase CVS48_23215 PF00463 Isocitrate lyase family CVS48_23220 PF14489 QueF-like protein CVS48_23220 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term CVS48_23225 PF07687 Peptidase dimerisation domain CVS48_23225 PF01546 Peptidase family M20/M25/M40 CVS48_23230 PF07690 Major Facilitator Superfamily CVS48_23235 PF07690 Major Facilitator Superfamily CVS48_23240 PF01066 CDP-alcohol phosphatidyltransferase CVS48_23245 PF01541 GIY-YIG catalytic domain CVS48_23245 PF02151 UvrB/uvrC motif CVS48_23245 PF08459 UvrC Helix-hairpin-helix N-terminal CVS48_23250 PF00933 Glycosyl hydrolase family 3 N terminal domain CVS48_23255 PF01648 4'-phosphopantetheinyl transferase superfamily CVS48_23260 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CVS48_23265 PF02321 Outer membrane efflux protein CVS48_23270 PF00873 AcrB/AcrD/AcrF family CVS48_23275 PF00529 HlyD membrane-fusion protein of T1SS CVS48_23275 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CVS48_23295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_23295 PF03459 TOBE domain CVS48_23300 PF03459 TOBE domain CVS48_23300 PF00005 ABC transporter CVS48_23305 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_23315 PF02675 S-adenosylmethionine decarboxylase CVS48_23340 PF01593 Flavin containing amine oxidoreductase CVS48_23345 PF01266 FAD dependent oxidoreductase CVS48_23350 PF00005 ABC transporter CVS48_23355 PF02653 Branched-chain amino acid transport system / permease component CVS48_23365 PF00248 Aldo/keto reductase family CVS48_23370 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_23375 PF13193 AMP-binding enzyme C-terminal domain CVS48_23375 PF00501 AMP-binding enzyme CVS48_23380 PF00378 Enoyl-CoA hydratase/isomerase CVS48_23390 PF07729 FCD domain CVS48_23390 PF00392 Bacterial regulatory proteins, gntR family CVS48_23405 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CVS48_23405 PF02770 Acyl-CoA dehydrogenase, middle domain CVS48_23405 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CVS48_23410 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_23415 PF00583 Acetyltransferase (GNAT) family CVS48_23415 PF13607 Succinyl-CoA ligase like flavodoxin domain CVS48_23415 PF13380 CoA binding domain CVS48_23420 PF00378 Enoyl-CoA hydratase/isomerase CVS48_23430 PF00108 Thiolase, N-terminal domain CVS48_23430 PF02803 Thiolase, C-terminal domain CVS48_23435 PF00378 Enoyl-CoA hydratase/isomerase CVS48_23440 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CVS48_23440 PF02770 Acyl-CoA dehydrogenase, middle domain CVS48_23440 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CVS48_23450 PF03466 LysR substrate binding domain CVS48_23450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_23455 PF00571 CBS domain CVS48_23475 PF06434 Aconitate hydratase 2 N-terminus CVS48_23475 PF11791 Aconitate B N-terminal domain CVS48_23475 PF00330 Aconitase family (aconitate hydratase) CVS48_23495 PF00593 TonB dependent receptor CVS48_23495 PF07715 TonB-dependent Receptor Plug Domain CVS48_23505 PF03466 LysR substrate binding domain CVS48_23505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_23510 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_23515 PF13193 AMP-binding enzyme C-terminal domain CVS48_23515 PF00501 AMP-binding enzyme CVS48_23525 PF03466 LysR substrate binding domain CVS48_23525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_23530 PF00694 Aconitase C-terminal domain CVS48_23530 PF00330 Aconitase family (aconitate hydratase) CVS48_23535 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CVS48_23550 PF09285 Elongation factor P, C-terminal CVS48_23550 PF01132 Elongation factor P (EF-P) OB domain CVS48_23550 PF08207 Elongation factor P (EF-P) KOW-like domain CVS48_23565 PF02954 Bacterial regulatory protein, Fis family CVS48_23565 PF00158 Sigma-54 interaction domain CVS48_23565 PF00072 Response regulator receiver domain CVS48_23595 PF00437 Type II/IV secretion system protein CVS48_23605 PF13629 Pilus formation protein N terminal region CVS48_23605 PF00263 Bacterial type II and III secretion system protein CVS48_23605 PF04972 BON domain CVS48_23635 PF00563 EAL domain CVS48_23635 PF00990 Diguanylate cyclase, GGDEF domain CVS48_23635 PF03707 Bacterial signalling protein N terminal repeat CVS48_23640 PF08479 POTRA domain, ShlB-type CVS48_23640 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CVS48_23650 PF01047 MarR family CVS48_23655 PF00005 ABC transporter CVS48_23655 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS48_23660 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_23660 PF12911 N-terminal TM domain of oligopeptide transport permease C CVS48_23665 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_23675 PF00565 Staphylococcal nuclease homologue CVS48_23680 PF01544 CorA-like Mg2+ transporter protein CVS48_23685 PF00580 UvrD/REP helicase N-terminal domain CVS48_23685 PF13361 UvrD-like helicase C-terminal domain CVS48_23695 PF00392 Bacterial regulatory proteins, gntR family CVS48_23695 PF00155 Aminotransferase class I and II CVS48_23700 PF00202 Aminotransferase class-III CVS48_23705 PF00171 Aldehyde dehydrogenase family CVS48_23710 PF00459 Inositol monophosphatase family CVS48_23715 PF02146 Sir2 family CVS48_23720 PF00132 Bacterial transferase hexapeptide (six repeats) CVS48_23725 PF16363 GDP-mannose 4,6 dehydratase CVS48_23730 PF00342 Phosphoglucose isomerase CVS48_23735 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CVS48_23735 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CVS48_23735 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CVS48_23735 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CVS48_23740 PF13807 G-rich domain on putative tyrosine kinase CVS48_23740 PF13614 AAA domain CVS48_23740 PF02706 Chain length determinant protein CVS48_23745 PF10531 SLBB domain CVS48_23745 PF02563 Polysaccharide biosynthesis/export protein CVS48_23750 PF02397 Bacterial sugar transferase CVS48_23755 PF00293 NUDIX domain CVS48_23760 PF01050 Mannose-6-phosphate isomerase CVS48_23760 PF00483 Nucleotidyl transferase CVS48_23770 PF16363 GDP-mannose 4,6 dehydratase CVS48_23775 PF01370 NAD dependent epimerase/dehydratase family CVS48_23785 PF00535 Glycosyl transferase family 2 CVS48_23795 PF13439 Glycosyltransferase Family 4 CVS48_23795 PF00534 Glycosyl transferases group 1 CVS48_23805 PF00132 Bacterial transferase hexapeptide (six repeats) CVS48_23810 PF00534 Glycosyl transferases group 1 CVS48_23810 PF13579 Glycosyl transferase 4-like domain CVS48_23815 PF00665 Integrase core domain CVS48_23820 PF00196 Bacterial regulatory proteins, luxR family CVS48_23820 PF00072 Response regulator receiver domain CVS48_23825 PF00072 Response regulator receiver domain CVS48_23825 PF00196 Bacterial regulatory proteins, luxR family CVS48_23840 PF09317 Domain of unknown function (DUF1974) CVS48_23840 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CVS48_23840 PF02770 Acyl-CoA dehydrogenase, middle domain CVS48_23840 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CVS48_23845 PF00108 Thiolase, N-terminal domain CVS48_23845 PF02803 Thiolase, C-terminal domain CVS48_23850 PF00378 Enoyl-CoA hydratase/isomerase CVS48_23850 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CVS48_23850 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CVS48_23860 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CVS48_23860 PF00378 Enoyl-CoA hydratase/isomerase CVS48_23860 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CVS48_23865 PF02803 Thiolase, C-terminal domain CVS48_23865 PF00108 Thiolase, N-terminal domain CVS48_23880 PF00501 AMP-binding enzyme CVS48_23880 PF13193 AMP-binding enzyme C-terminal domain CVS48_23885 PF00884 Sulfatase CVS48_23885 PF16347 Domain of unknown function (DUF4976) CVS48_23890 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_23900 PF07715 TonB-dependent Receptor Plug Domain CVS48_23900 PF00593 TonB dependent receptor CVS48_23905 PF03812 2-keto-3-deoxygluconate permease CVS48_23910 PF17042 Nucleotide-binding C-terminal domain CVS48_23910 PF07005 Sugar-binding N-terminal domain CVS48_23915 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CVS48_23925 PF00440 Bacterial regulatory proteins, tetR family CVS48_23930 PF02321 Outer membrane efflux protein CVS48_23935 PF13533 Biotin-lipoyl like CVS48_23940 PF00005 ABC transporter CVS48_23950 PF13193 AMP-binding enzyme C-terminal domain CVS48_23950 PF00501 AMP-binding enzyme CVS48_23955 PF01144 Coenzyme A transferase CVS48_23960 PF01144 Coenzyme A transferase CVS48_23970 PF02515 CoA-transferase family III CVS48_23975 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_23985 PF09339 IclR helix-turn-helix domain CVS48_23985 PF01614 Bacterial transcriptional regulator CVS48_23990 PF05995 Cysteine dioxygenase type I CVS48_23995 PF02146 Sir2 family CVS48_24025 PF00581 Rhodanese-like domain CVS48_24035 PF01842 ACT domain CVS48_24035 PF00696 Amino acid kinase family CVS48_24035 PF13840 ACT domain CVS48_24040 PF09179 TilS substrate binding domain CVS48_24040 PF01171 PP-loop family CVS48_24045 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CVS48_24050 PF12833 Helix-turn-helix domain CVS48_24050 PF00730 HhH-GPD superfamily base excision DNA repair protein CVS48_24050 PF06029 AlkA N-terminal domain CVS48_24050 PF02805 Metal binding domain of Ada CVS48_24055 PF09190 DALR domain CVS48_24055 PF01406 tRNA synthetases class I (C) catalytic domain CVS48_24065 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CVS48_24070 PF00149 Calcineurin-like phosphoesterase CVS48_24075 PF02673 Bacitracin resistance protein BacA CVS48_24080 PF03471 Transporter associated domain CVS48_24080 PF03741 Integral membrane protein TerC family CVS48_24085 PF00459 Inositol monophosphatase family CVS48_24090 PF00588 SpoU rRNA Methylase family CVS48_24095 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_24105 PF05552 Conserved TM helix CVS48_24105 PF00924 Mechanosensitive ion channel CVS48_24130 PF03466 LysR substrate binding domain CVS48_24130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_24135 PF00596 Class II Aldolase and Adducin N-terminal domain CVS48_24140 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_24145 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CVS48_24150 PF09084 NMT1/THI5 like CVS48_24155 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_24160 PF00005 ABC transporter CVS48_24170 PF01425 Amidase CVS48_24175 PF07729 FCD domain CVS48_24175 PF00392 Bacterial regulatory proteins, gntR family CVS48_24190 PF03358 NADPH-dependent FMN reductase CVS48_24195 PF07311 Dodecin CVS48_24205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_24205 PF03466 LysR substrate binding domain CVS48_24210 PF00106 short chain dehydrogenase CVS48_24215 PF00107 Zinc-binding dehydrogenase CVS48_24215 PF08240 Alcohol dehydrogenase GroES-like domain CVS48_24235 PF01042 Endoribonuclease L-PSP CVS48_24245 PF00474 Sodium:solute symporter family CVS48_24430 PF02413 Caudovirales tail fibre assembly protein, lambda gpK CVS48_24490 PF13356 Arm DNA-binding domain CVS48_24490 PF00589 Phage integrase family CVS48_24520 PF00816 H-NS histone family CVS48_24545 PF03796 DnaB-like helicase C terminal domain CVS48_24545 PF00772 DnaB-like helicase N terminal domain CVS48_24605 PF01844 HNH endonuclease CVS48_24615 PF04381 Putative exonuclease, RdgC CVS48_24655 PF05190 MutS family domain IV CVS48_24655 PF00488 MutS domain V CVS48_24655 PF01624 MutS domain I CVS48_24655 PF05188 MutS domain II CVS48_24655 PF05192 MutS domain III CVS48_24660 PF08007 Cupin superfamily protein CVS48_24670 PF06804 NlpB/DapX lipoprotein CVS48_24675 PF00701 Dihydrodipicolinate synthetase family CVS48_24680 PF02163 Peptidase family M50 CVS48_24685 PF01300 Telomere recombination CVS48_24690 PF04228 Putative neutral zinc metallopeptidase CVS48_24745 PF02627 Carboxymuconolactone decarboxylase family CVS48_24855 PF07120 Protein of unknown function (DUF1376) CVS48_24895 PF13396 Phospholipase_D-nuclease N-terminal CVS48_24895 PF13091 PLD-like domain CVS48_24900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_24900 PF03466 LysR substrate binding domain CVS48_24905 PF00378 Enoyl-CoA hydratase/isomerase CVS48_24910 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_24915 PF02515 CoA-transferase family III CVS48_24935 PF07729 FCD domain CVS48_24935 PF00392 Bacterial regulatory proteins, gntR family CVS48_24940 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_24950 PF00196 Bacterial regulatory proteins, luxR family CVS48_24950 PF00072 Response regulator receiver domain CVS48_24960 PF08479 POTRA domain, ShlB-type CVS48_24960 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CVS48_24965 PF05860 haemagglutination activity domain CVS48_24975 PF02753 Pili assembly chaperone PapD, C-terminal domain CVS48_24975 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CVS48_24980 PF13953 PapC C-terminal domain CVS48_24980 PF13954 PapC N-terminal domain CVS48_24980 PF00577 Outer membrane usher protein CVS48_24985 PF02753 Pili assembly chaperone PapD, C-terminal domain CVS48_24985 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CVS48_24995 PF07690 Major Facilitator Superfamily CVS48_25000 PF13609 Gram-negative porin CVS48_25005 PF00111 2Fe-2S iron-sulfur cluster binding domain CVS48_25005 PF00175 Oxidoreductase NAD-binding domain CVS48_25020 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CVS48_25020 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CVS48_25020 PF00205 Thiamine pyrophosphate enzyme, central domain CVS48_25035 PF00355 Rieske [2Fe-2S] domain CVS48_25045 PF01614 Bacterial transcriptional regulator CVS48_25045 PF09339 IclR helix-turn-helix domain CVS48_25050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_25050 PF03466 LysR substrate binding domain CVS48_25060 PF00171 Aldehyde dehydrogenase family CVS48_25065 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CVS48_25065 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CVS48_25070 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_25075 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CVS48_25075 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CVS48_25080 PF03450 CO dehydrogenase flavoprotein C-terminal domain CVS48_25080 PF00941 FAD binding domain in molybdopterin dehydrogenase CVS48_25085 PF00111 2Fe-2S iron-sulfur cluster binding domain CVS48_25085 PF01799 [2Fe-2S] binding domain CVS48_25100 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_25105 PF13607 Succinyl-CoA ligase like flavodoxin domain CVS48_25105 PF13380 CoA binding domain CVS48_25105 PF00583 Acetyltransferase (GNAT) family CVS48_25110 PF00378 Enoyl-CoA hydratase/isomerase CVS48_25120 PF07969 Amidohydrolase family CVS48_25135 PF03480 Bacterial extracellular solute-binding protein, family 7 CVS48_25150 PF03480 Bacterial extracellular solute-binding protein, family 7 CVS48_25155 PF01220 Dehydroquinase class II CVS48_25160 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CVS48_25165 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CVS48_25170 PF00775 Dioxygenase CVS48_25170 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal CVS48_25180 PF00206 Lyase CVS48_25180 PF10397 Adenylosuccinate lyase C-terminus CVS48_25190 PF00313 'Cold-shock' DNA-binding domain CVS48_25215 PF03060 Nitronate monooxygenase CVS48_25220 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_25225 PF02515 CoA-transferase family III CVS48_25230 PF00378 Enoyl-CoA hydratase/isomerase CVS48_25240 PF00682 HMGL-like CVS48_25245 PF00501 AMP-binding enzyme CVS48_25245 PF13193 AMP-binding enzyme C-terminal domain CVS48_25250 PF00378 Enoyl-CoA hydratase/isomerase CVS48_25260 PF07660 Secretin and TonB N terminus short domain CVS48_25260 PF07715 TonB-dependent Receptor Plug Domain CVS48_25260 PF00593 TonB dependent receptor CVS48_25300 PF01381 Helix-turn-helix CVS48_25305 PF01266 FAD dependent oxidoreductase CVS48_25310 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_25315 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_25320 PF00497 Bacterial extracellular solute-binding proteins, family 3 CVS48_25325 PF00005 ABC transporter CVS48_25330 PF00171 Aldehyde dehydrogenase family CVS48_25340 PF02423 Ornithine cyclodeaminase/mu-crystallin family CVS48_25345 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_25350 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_25350 PF12911 N-terminal TM domain of oligopeptide transport permease C CVS48_25355 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CVS48_25360 PF01979 Amidohydrolase family CVS48_25365 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS48_25365 PF00005 ABC transporter CVS48_25370 PF01177 Asp/Glu/Hydantoin racemase CVS48_25375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_25375 PF03466 LysR substrate binding domain CVS48_25380 PF00795 Carbon-nitrogen hydrolase CVS48_25385 PF01979 Amidohydrolase family CVS48_25390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_25390 PF07730 Histidine kinase CVS48_25390 PF05231 MASE1 CVS48_25395 PF00196 Bacterial regulatory proteins, luxR family CVS48_25395 PF00072 Response regulator receiver domain CVS48_25405 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_25410 PF00005 ABC transporter CVS48_25415 PF02560 Cyanate lyase C-terminal domain CVS48_25420 PF08543 Phosphomethylpyrimidine kinase CVS48_25435 PF00639 PPIC-type PPIASE domain CVS48_25435 PF09312 SurA N-terminal domain CVS48_25460 PF02472 Biopolymer transport protein ExbD/TolR CVS48_25465 PF01618 MotA/TolQ/ExbB proton channel family CVS48_25505 PF08671 Anti-repressor SinI CVS48_25505 PF01381 Helix-turn-helix CVS48_25510 PF00596 Class II Aldolase and Adducin N-terminal domain CVS48_25515 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_25540 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_25545 PF02515 CoA-transferase family III CVS48_25550 PF02785 Biotin carboxylase C-terminal domain CVS48_25550 PF00289 Biotin carboxylase, N-terminal domain CVS48_25550 PF00364 Biotin-requiring enzyme CVS48_25550 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CVS48_25550 PF00682 HMGL-like CVS48_25550 PF02436 Conserved carboxylase domain CVS48_25555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_25555 PF03466 LysR substrate binding domain CVS48_25565 PF00108 Thiolase, N-terminal domain CVS48_25565 PF02803 Thiolase, C-terminal domain CVS48_25570 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CVS48_25570 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CVS48_25570 PF00378 Enoyl-CoA hydratase/isomerase CVS48_25580 PF08240 Alcohol dehydrogenase GroES-like domain CVS48_25580 PF00107 Zinc-binding dehydrogenase CVS48_25600 PF00011 Hsp20/alpha crystallin family CVS48_25625 PF07715 TonB-dependent Receptor Plug Domain CVS48_25625 PF00593 TonB dependent receptor CVS48_25630 PF00196 Bacterial regulatory proteins, luxR family CVS48_25630 PF00072 Response regulator receiver domain CVS48_25635 PF07730 Histidine kinase CVS48_25635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_25635 PF13492 GAF domain CVS48_25650 PF08240 Alcohol dehydrogenase GroES-like domain CVS48_25650 PF00107 Zinc-binding dehydrogenase CVS48_25650 PF13823 Alcohol dehydrogenase GroES-associated CVS48_25660 PF01370 NAD dependent epimerase/dehydratase family CVS48_25680 PF16861 Carbamoyltransferase C-terminus CVS48_25680 PF02543 Carbamoyltransferase N-terminus CVS48_25700 PF13439 Glycosyltransferase Family 4 CVS48_25700 PF00534 Glycosyl transferases group 1 CVS48_25705 PF00005 ABC transporter CVS48_25705 PF00664 ABC transporter transmembrane region CVS48_25715 PF00535 Glycosyl transferase family 2 CVS48_25725 PF01339 CheB methylesterase CVS48_25725 PF01739 CheR methyltransferase, SAM binding domain CVS48_25725 PF08448 PAS fold CVS48_25725 PF03705 CheR methyltransferase, all-alpha domain CVS48_25740 PF02540 NAD synthase CVS48_25745 PF00483 Nucleotidyl transferase CVS48_25750 PF05067 Manganese containing catalase CVS48_25775 PF01339 CheB methylesterase CVS48_25790 PF00072 Response regulator receiver domain CVS48_25790 PF01339 CheB methylesterase CVS48_25810 PF00924 Mechanosensitive ion channel CVS48_25820 PF02464 Competence-damaged protein CVS48_25820 PF18146 Damage-inducible protein CinA KH domain CVS48_25820 PF00994 Probable molybdopterin binding domain CVS48_25825 PF00561 alpha/beta hydrolase fold CVS48_25840 PF00775 Dioxygenase CVS48_25840 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal CVS48_25850 PF07690 Major Facilitator Superfamily CVS48_25855 PF01494 FAD binding domain CVS48_25860 PF00171 Aldehyde dehydrogenase family CVS48_25865 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CVS48_25865 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CVS48_25865 PF00205 Thiamine pyrophosphate enzyme, central domain CVS48_25870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_25870 PF03466 LysR substrate binding domain CVS48_25875 PF00501 AMP-binding enzyme CVS48_25875 PF13193 AMP-binding enzyme C-terminal domain CVS48_25880 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CVS48_25880 PF02770 Acyl-CoA dehydrogenase, middle domain CVS48_25880 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CVS48_25890 PF00108 Thiolase, N-terminal domain CVS48_25890 PF02803 Thiolase, C-terminal domain CVS48_25895 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term CVS48_25895 PF12833 Helix-turn-helix domain CVS48_25900 PF02515 CoA-transferase family III CVS48_25905 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_25910 PF01361 Tautomerase enzyme CVS48_25915 PF00571 CBS domain CVS48_25915 PF00005 ABC transporter CVS48_25920 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_25935 PF07690 Major Facilitator Superfamily CVS48_25940 PF00830 Ribosomal L28 family CVS48_25945 PF00471 Ribosomal protein L33 CVS48_25950 PF13458 Periplasmic binding protein CVS48_25960 PF12399 Branched-chain amino acid ATP-binding cassette transporter CVS48_25960 PF00005 ABC transporter CVS48_25965 PF00916 Sulfate permease family CVS48_25965 PF01740 STAS domain CVS48_25975 PF07943 Penicillin-binding protein 5, C-terminal domain CVS48_25975 PF00768 D-alanyl-D-alanine carboxypeptidase CVS48_25985 PF01047 MarR family CVS48_25990 PF07690 Major Facilitator Superfamily CVS48_25995 PF00133 tRNA synthetases class I (I, L, M and V) CVS48_25995 PF08264 Anticodon-binding domain of tRNA CVS48_25995 PF13603 Leucyl-tRNA synthetase, Domain 2 CVS48_25995 PF09334 tRNA synthetases class I (M) CVS48_26010 PF00171 Aldehyde dehydrogenase family CVS48_26025 PF01425 Amidase CVS48_26035 PF07690 Major Facilitator Superfamily CVS48_26040 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CVS48_26040 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CVS48_26055 PF03466 LysR substrate binding domain CVS48_26055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_26065 PF00596 Class II Aldolase and Adducin N-terminal domain CVS48_26095 PF10150 Ribonuclease E/G family CVS48_26095 PF00575 S1 RNA binding domain CVS48_26100 PF11254 Protein of unknown function (DUF3053) CVS48_26105 PF00360 Phytochrome region CVS48_26105 PF00563 EAL domain CVS48_26105 PF01590 GAF domain CVS48_26105 PF00990 Diguanylate cyclase, GGDEF domain CVS48_26115 PF02254 TrkA-N domain CVS48_26115 PF00999 Sodium/hydrogen exchanger family CVS48_26120 PF00005 ABC transporter CVS48_26120 PF00664 ABC transporter transmembrane region CVS48_26135 PF03692 Putative zinc- or iron-chelating domain CVS48_26145 PF01522 Polysaccharide deacetylase CVS48_26150 PF13439 Glycosyltransferase Family 4 CVS48_26150 PF00534 Glycosyl transferases group 1 CVS48_26155 PF00535 Glycosyl transferase family 2 CVS48_26160 PF01522 Polysaccharide deacetylase CVS48_26165 PF00534 Glycosyl transferases group 1 CVS48_26170 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CVS48_26170 PF02811 PHP domain CVS48_26170 PF01336 OB-fold nucleic acid binding domain CVS48_26170 PF07733 Bacterial DNA polymerase III alpha NTPase domain CVS48_26170 PF14579 Helix-hairpin-helix motif CVS48_26180 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CVS48_26180 PF00271 Helicase conserved C-terminal domain CVS48_26180 PF04408 Helicase associated domain (HA2) CVS48_26180 PF11898 Domain of unknown function (DUF3418) CVS48_26180 PF00270 DEAD/DEAH box helicase CVS48_26185 PF00696 Amino acid kinase family CVS48_26185 PF00583 Acetyltransferase (GNAT) family CVS48_26190 PF04362 Bacterial Fe(2+) trafficking CVS48_26195 PF05506 Domain of unknown function (DUF756) CVS48_26195 PF04185 Phosphoesterase family CVS48_26200 PF01895 PhoU domain CVS48_26205 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CVS48_26210 PF18158 Adaptive response protein AidB N-terminal domain CVS48_26210 PF02770 Acyl-CoA dehydrogenase, middle domain CVS48_26210 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CVS48_26215 PF01425 Amidase CVS48_26230 PF02245 Methylpurine-DNA glycosylase (MPG) CVS48_26240 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_26245 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_26250 PF08402 TOBE domain CVS48_26250 PF00005 ABC transporter CVS48_26255 PF13416 Bacterial extracellular solute-binding protein CVS48_26275 PF03480 Bacterial extracellular solute-binding protein, family 7 CVS48_26285 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CVS48_26290 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS48_26290 PF00005 ABC transporter CVS48_26295 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS48_26295 PF00005 ABC transporter CVS48_26300 PF01979 Amidohydrolase family CVS48_26305 PF01979 Amidohydrolase family CVS48_26310 PF12911 N-terminal TM domain of oligopeptide transport permease C CVS48_26310 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_26320 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CVS48_26325 PF01177 Asp/Glu/Hydantoin racemase CVS48_26340 PF00202 Aminotransferase class-III CVS48_26345 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CVS48_26345 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CVS48_26370 PF04909 Amidohydrolase CVS48_26375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_26375 PF03466 LysR substrate binding domain CVS48_26380 PF00764 Arginosuccinate synthase CVS48_26385 PF02705 K+ potassium transporter CVS48_26390 PF00512 His Kinase A (phospho-acceptor) domain CVS48_26390 PF08521 Two-component sensor kinase N-terminal CVS48_26390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_26395 PF00072 Response regulator receiver domain CVS48_26395 PF00486 Transcriptional regulatory protein, C terminal CVS48_26400 PF02472 Biopolymer transport protein ExbD/TolR CVS48_26405 PF01618 MotA/TolQ/ExbB proton channel family CVS48_26420 PF00216 Bacterial DNA-binding protein CVS48_26425 PF13640 2OG-Fe(II) oxygenase superfamily CVS48_26425 PF18331 PKHD-type hydroxylase C-terminal domain CVS48_26430 PF01053 Cys/Met metabolism PLP-dependent enzyme CVS48_26435 PF08032 RNA 2'-O ribose methyltransferase substrate binding CVS48_26435 PF00588 SpoU rRNA Methylase family CVS48_26440 PF00773 RNB domain CVS48_26440 PF17876 Cold shock domain CVS48_26440 PF08206 Ribonuclease B OB domain CVS48_26440 PF00575 S1 RNA binding domain CVS48_26440 PF08461 Ribonuclease R winged-helix domain CVS48_26465 PF13673 Acetyltransferase (GNAT) domain CVS48_26480 PF02040 Arsenical pump membrane protein CVS48_26485 PF04143 Sulphur transport CVS48_26490 PF01645 Conserved region in glutamate synthase CVS48_26495 PF13091 PLD-like domain CVS48_26495 PF13396 Phospholipase_D-nuclease N-terminal CVS48_26505 PF10017 Histidine-specific methyltransferase, SAM-dependent CVS48_26510 PF03781 Sulfatase-modifying factor enzyme 1 CVS48_26510 PF12867 DinB superfamily CVS48_26540 PF00892 EamA-like transporter family CVS48_26550 PF00990 Diguanylate cyclase, GGDEF domain CVS48_26550 PF00563 EAL domain CVS48_26550 PF03707 Bacterial signalling protein N terminal repeat CVS48_26585 PF01322 Cytochrome C' CVS48_26590 PF00206 Lyase CVS48_26590 PF08328 Adenylosuccinate lyase C-terminal CVS48_26595 PF00043 Glutathione S-transferase, C-terminal domain CVS48_26595 PF13417 Glutathione S-transferase, N-terminal domain CVS48_26600 PF01925 Sulfite exporter TauE/SafE CVS48_26610 PF03466 LysR substrate binding domain CVS48_26610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_26615 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_26625 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CVS48_26625 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CVS48_26630 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CVS48_26635 PF02233 NAD(P) transhydrogenase beta subunit CVS48_26640 PF02754 Cysteine-rich domain CVS48_26640 PF13183 4Fe-4S dicluster domain CVS48_26645 PF01565 FAD binding domain CVS48_26650 PF01565 FAD binding domain CVS48_26650 PF02913 FAD linked oxidases, C-terminal domain CVS48_26655 PF02913 FAD linked oxidases, C-terminal domain CVS48_26655 PF01565 FAD binding domain CVS48_26660 PF00793 DAHP synthetase I family CVS48_26665 PF01523 Putative modulator of DNA gyrase CVS48_26670 PF00816 H-NS histone family CVS48_26680 PF11940 Domain of unknown function (DUF3458) Ig-like fold CVS48_26680 PF01433 Peptidase family M1 domain CVS48_26680 PF17432 Domain of unknown function (DUF3458_C) ARM repeats CVS48_26685 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CVS48_26695 PF14821 Threonine synthase N terminus CVS48_26695 PF00291 Pyridoxal-phosphate dependent enzyme CVS48_26700 PF01842 ACT domain CVS48_26700 PF03447 Homoserine dehydrogenase, NAD binding domain CVS48_26700 PF00742 Homoserine dehydrogenase CVS48_26705 PF00155 Aminotransferase class I and II CVS48_26715 PF00578 AhpC/TSA family CVS48_26720 PF02562 PhoH-like protein CVS48_26720 PF13638 PIN domain CVS48_26730 PF01557 Fumarylacetoacetate (FAA) hydrolase family CVS48_26740 PF02653 Branched-chain amino acid transport system / permease component CVS48_26745 PF00005 ABC transporter CVS48_26750 PF12399 Branched-chain amino acid ATP-binding cassette transporter CVS48_26750 PF00005 ABC transporter CVS48_26780 PF00719 Inorganic pyrophosphatase CVS48_26800 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CVS48_26800 PF03900 Porphobilinogen deaminase, C-terminal domain CVS48_26805 PF03741 Integral membrane protein TerC family CVS48_26810 PF03741 Integral membrane protein TerC family CVS48_26815 PF02629 CoA binding domain CVS48_26815 PF00549 CoA-ligase CVS48_26820 PF00549 CoA-ligase CVS48_26820 PF08442 ATP-grasp domain CVS48_26830 PF01717 Cobalamin-independent synthase, Catalytic domain CVS48_26830 PF08267 Cobalamin-independent synthase, N-terminal domain CVS48_26835 PF03466 LysR substrate binding domain CVS48_26835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_26840 PF02631 RecX family CVS48_26845 PF00154 recA bacterial DNA recombination protein CVS48_26850 PF00072 Response regulator receiver domain CVS48_26850 PF00486 Transcriptional regulatory protein, C terminal CVS48_26855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_26855 PF00512 His Kinase A (phospho-acceptor) domain CVS48_26855 PF08521 Two-component sensor kinase N-terminal CVS48_26860 PF08946 Osmosensory transporter coiled coil CVS48_26860 PF00083 Sugar (and other) transporter CVS48_26870 PF04381 Putative exonuclease, RdgC CVS48_26875 PF00990 Diguanylate cyclase, GGDEF domain CVS48_26880 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CVS48_26880 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CVS48_26930 PF00392 Bacterial regulatory proteins, gntR family CVS48_26930 PF00155 Aminotransferase class I and II CVS48_26955 PF01037 Lrp/AsnC ligand binding domain CVS48_26955 PF13404 AsnC-type helix-turn-helix domain CVS48_26965 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CVS48_26970 PF13593 SBF-like CPA transporter family (DUF4137) CVS48_26975 PF00772 DnaB-like helicase N terminal domain CVS48_26975 PF03796 DnaB-like helicase C terminal domain CVS48_26985 PF03948 Ribosomal protein L9, C-terminal domain CVS48_26985 PF01281 Ribosomal protein L9, N-terminal domain CVS48_26990 PF01084 Ribosomal protein S18 CVS48_27000 PF01250 Ribosomal protein S6 CVS48_27005 PF05675 Protein of unknown function (DUF817) CVS48_27010 PF02649 Type I GTP cyclohydrolase folE2 CVS48_27015 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CVS48_27015 PF02779 Transketolase, pyrimidine binding domain CVS48_27015 PF02780 Transketolase, C-terminal domain CVS48_27020 PF00348 Polyprenyl synthetase CVS48_27025 PF02609 Exonuclease VII small subunit CVS48_27035 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_27050 PF07992 Pyridine nucleotide-disulphide oxidoreductase CVS48_27060 PF13419 Haloacid dehalogenase-like hydrolase CVS48_27070 PF00005 ABC transporter CVS48_27070 PF08402 TOBE domain CVS48_27075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_27075 PF03466 LysR substrate binding domain CVS48_27085 PF00581 Rhodanese-like domain CVS48_27095 PF01435 Peptidase family M48 CVS48_27100 PF03313 Serine dehydratase alpha chain CVS48_27100 PF03315 Serine dehydratase beta chain CVS48_27105 PF02690 Na+/Pi-cotransporter CVS48_27110 PF01738 Dienelactone hydrolase family CVS48_27115 PF02535 ZIP Zinc transporter CVS48_27120 PF01612 3'-5' exonuclease CVS48_27120 PF00476 DNA polymerase family A CVS48_27120 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CVS48_27120 PF01367 5'-3' exonuclease, C-terminal SAM fold CVS48_27125 PF03641 Possible lysine decarboxylase CVS48_27135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_27135 PF03466 LysR substrate binding domain CVS48_27150 PF16198 tRNA pseudouridylate synthase B C-terminal domain CVS48_27150 PF01509 TruB family pseudouridylate synthase (N terminal domain) CVS48_27155 PF02033 Ribosome-binding factor A CVS48_27160 PF04760 Translation initiation factor IF-2, N-terminal region CVS48_27160 PF11987 Translation-initiation factor 2 CVS48_27160 PF08364 Bacterial translation initiation factor IF-2 associated region CVS48_27160 PF00009 Elongation factor Tu GTP binding domain CVS48_27165 PF08529 NusA N-terminal domain CVS48_27165 PF13184 NusA-like KH domain CVS48_27170 PF02576 RimP N-terminal domain CVS48_27170 PF17384 RimP C-terminal SH3 domain CVS48_27175 PF00849 RNA pseudouridylate synthase CVS48_27175 PF01479 S4 domain CVS48_27180 PF04079 Segregation and condensation complex subunit ScpB CVS48_27190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_27190 PF03466 LysR substrate binding domain CVS48_27195 PF02492 CobW/HypB/UreG, nucleotide-binding domain CVS48_27195 PF07683 Cobalamin synthesis protein cobW C-terminal domain CVS48_27210 PF00072 Response regulator receiver domain CVS48_27210 PF00486 Transcriptional regulatory protein, C terminal CVS48_27215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_27215 PF08521 Two-component sensor kinase N-terminal CVS48_27215 PF00512 His Kinase A (phospho-acceptor) domain CVS48_27220 PF13180 PDZ domain CVS48_27225 PF14497 Glutathione S-transferase, C-terminal domain CVS48_27225 PF02798 Glutathione S-transferase, N-terminal domain CVS48_27230 PF02401 LytB protein CVS48_27235 PF05697 Bacterial trigger factor protein (TF) CVS48_27235 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CVS48_27235 PF05698 Bacterial trigger factor protein (TF) C-terminus CVS48_27240 PF04002 RadC-like JAB domain CVS48_27245 PF04199 Putative cyclase CVS48_27250 PF03301 Tryptophan 2,3-dioxygenase CVS48_27255 PF01197 Ribosomal protein L31 CVS48_27265 PF01554 MatE CVS48_27275 PF03061 Thioesterase superfamily CVS48_27280 PF00378 Enoyl-CoA hydratase/isomerase CVS48_27285 PF00171 Aldehyde dehydrogenase family CVS48_27290 PF00111 2Fe-2S iron-sulfur cluster binding domain CVS48_27290 PF00175 Oxidoreductase NAD-binding domain CVS48_27290 PF00970 Oxidoreductase FAD-binding domain CVS48_27295 PF01883 Iron-sulfur cluster assembly protein CVS48_27300 PF05138 Phenylacetic acid catabolic protein CVS48_27305 PF06243 Phenylacetic acid degradation B CVS48_27310 PF05138 Phenylacetic acid catabolic protein CVS48_27315 PF08223 PaaX-like protein C-terminal domain CVS48_27315 PF07848 PaaX-like protein CVS48_27320 PF03853 YjeF-related protein N-terminus CVS48_27325 PF00929 Exonuclease CVS48_27330 PF01435 Peptidase family M48 CVS48_27335 PF03193 RsgA GTPase CVS48_27345 PF00293 NUDIX domain CVS48_27350 PF01245 Ribosomal protein L19 CVS48_27370 PF00009 Elongation factor Tu GTP binding domain CVS48_27375 PF01507 Phosphoadenosine phosphosulfate reductase family CVS48_27380 PF01507 Phosphoadenosine phosphosulfate reductase family CVS48_27385 PF12857 TOBE-like domain CVS48_27385 PF00005 ABC transporter CVS48_27385 PF17850 CysA C-terminal regulatory domain CVS48_27390 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_27395 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_27405 PF10417 C-terminal domain of 1-Cys peroxiredoxin CVS48_27405 PF00578 AhpC/TSA family CVS48_27410 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CVS48_27410 PF12806 Acetyl-CoA dehydrogenase C-terminal like CVS48_27410 PF02770 Acyl-CoA dehydrogenase, middle domain CVS48_27410 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CVS48_27415 PF06826 Predicted Permease Membrane Region CVS48_27415 PF02080 TrkA-C domain CVS48_27420 PF00155 Aminotransferase class I and II CVS48_27425 PF06826 Predicted Permease Membrane Region CVS48_27430 PF00766 Electron transfer flavoprotein FAD-binding domain CVS48_27430 PF01012 Electron transfer flavoprotein domain CVS48_27435 PF01012 Electron transfer flavoprotein domain CVS48_27440 PF00850 Histone deacetylase domain CVS48_27445 PF13406 Transglycosylase SLT domain CVS48_27450 PF00291 Pyridoxal-phosphate dependent enzyme CVS48_27470 PF01370 NAD dependent epimerase/dehydratase family CVS48_27475 PF00294 pfkB family carbohydrate kinase CVS48_27480 PF18073 Rubredoxin metal binding domain CVS48_27490 PF00216 Bacterial DNA-binding protein CVS48_27495 PF00575 S1 RNA binding domain CVS48_27500 PF02224 Cytidylate kinase CVS48_27505 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CVS48_27510 PF02153 Prephenate dehydrogenase CVS48_27520 PF00800 Prephenate dehydratase CVS48_27520 PF01817 Chorismate mutase type II CVS48_27520 PF01842 ACT domain CVS48_27525 PF00266 Aminotransferase class-V CVS48_27530 PF00521 DNA gyrase/topoisomerase IV, subunit A CVS48_27530 PF03989 DNA gyrase C-terminal domain, beta-propeller CVS48_27535 PF00691 OmpA family CVS48_27545 PF13419 Haloacid dehalogenase-like hydrolase CVS48_27550 PF07690 Major Facilitator Superfamily CVS48_27560 PF02350 UDP-N-acetylglucosamine 2-epimerase CVS48_27570 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CVS48_27570 PF13632 Glycosyl transferase family group 2 CVS48_27590 PF13406 Transglycosylase SLT domain CVS48_27595 PF03475 3-alpha domain CVS48_27595 PF03473 MOSC domain CVS48_27600 PF04305 Protein of unknown function (DUF455) CVS48_27615 PF00664 ABC transporter transmembrane region CVS48_27615 PF00005 ABC transporter CVS48_27620 PF02875 Mur ligase family, glutamate ligase domain CVS48_27620 PF08245 Mur ligase middle domain CVS48_27620 PF08443 RimK-like ATP-grasp domain CVS48_27625 PF02875 Mur ligase family, glutamate ligase domain CVS48_27625 PF08245 Mur ligase middle domain CVS48_27625 PF08443 RimK-like ATP-grasp domain CVS48_27630 PF05532 CsbD-like CVS48_27645 PF02567 Phenazine biosynthesis-like protein CVS48_27655 PF03239 Iron permease FTR1 family CVS48_27665 PF10634 Fe2+ transport protein CVS48_27670 PF07879 PHB/PHA accumulation regulator DNA-binding domain CVS48_27670 PF05233 PHB accumulation regulatory domain CVS48_27675 PF00106 short chain dehydrogenase CVS48_27680 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus CVS48_27690 PF00849 RNA pseudouridylate synthase CVS48_27690 PF01479 S4 domain CVS48_27695 PF13525 Outer membrane lipoprotein CVS48_27700 PF04851 Type III restriction enzyme, res subunit CVS48_27700 PF13307 Helicase C-terminal domain CVS48_27705 PF16921 Tex protein YqgF-like domain CVS48_27705 PF09371 Tex-like protein N-terminal domain CVS48_27705 PF17674 HHH domain CVS48_27705 PF00575 S1 RNA binding domain CVS48_27715 PF00579 tRNA synthetases class I (W and Y) CVS48_27740 PF00701 Dihydrodipicolinate synthetase family CVS48_27745 PF05544 Proline racemase CVS48_27750 PF01266 FAD dependent oxidoreductase CVS48_27755 PF04324 BFD-like [2Fe-2S] binding domain CVS48_27755 PF07992 Pyridine nucleotide-disulphide oxidoreductase CVS48_27760 PF00459 Inositol monophosphatase family CVS48_27765 PF00005 ABC transporter CVS48_27765 PF08402 TOBE domain CVS48_27775 PF13416 Bacterial extracellular solute-binding protein CVS48_27780 PF07715 TonB-dependent Receptor Plug Domain CVS48_27780 PF00593 TonB dependent receptor CVS48_27785 PF04773 FecR protein CVS48_27785 PF16220 Domain of unknown function (DUF4880) CVS48_27790 PF08281 Sigma-70, region 4 CVS48_27790 PF04542 Sigma-70 region 2 CVS48_27795 PF03969 AFG1-like ATPase CVS48_27800 PF07992 Pyridine nucleotide-disulphide oxidoreductase CVS48_27800 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CVS48_27805 PF00364 Biotin-requiring enzyme CVS48_27805 PF02817 e3 binding domain CVS48_27805 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CVS48_27810 PF16870 2-oxoglutarate dehydrogenase C-terminal CVS48_27810 PF16078 2-oxoglutarate dehydrogenase N-terminus CVS48_27810 PF02779 Transketolase, pyrimidine binding domain CVS48_27810 PF00676 Dehydrogenase E1 component CVS48_27815 PF01037 Lrp/AsnC ligand binding domain CVS48_27820 PF00291 Pyridoxal-phosphate dependent enzyme CVS48_27830 PF00576 HIUase/Transthyretin family CVS48_27840 PF01546 Peptidase family M20/M25/M40 CVS48_27840 PF07687 Peptidase dimerisation domain CVS48_27845 PF07687 Peptidase dimerisation domain CVS48_27845 PF01546 Peptidase family M20/M25/M40 CVS48_27850 PF00860 Permease family CVS48_27855 PF03169 OPT oligopeptide transporter protein CVS48_27860 PF00456 Transketolase, thiamine diphosphate binding domain CVS48_27860 PF17831 Pyruvate dehydrogenase E1 component middle domain CVS48_27865 PF01515 Phosphate acetyl/butaryl transferase CVS48_27865 PF03949 Malic enzyme, NAD binding domain CVS48_27865 PF00390 Malic enzyme, N-terminal domain CVS48_27875 PF03466 LysR substrate binding domain CVS48_27875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_27885 PF00285 Citrate synthase, C-terminal domain CVS48_27890 PF03937 Flavinator of succinate dehydrogenase CVS48_27895 PF13085 2Fe-2S iron-sulfur cluster binding domain CVS48_27900 PF02910 Fumarate reductase flavoprotein C-term CVS48_27900 PF00890 FAD binding domain CVS48_27905 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CVS48_27910 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CVS48_27915 PF07702 UTRA domain CVS48_27915 PF00392 Bacterial regulatory proteins, gntR family CVS48_27920 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CVS48_27920 PF00056 lactate/malate dehydrogenase, NAD binding domain CVS48_27930 PF00285 Citrate synthase, C-terminal domain CVS48_27935 PF03972 MmgE/PrpD family CVS48_27945 PF01170 Putative RNA methylase family UPF0020 CVS48_27945 PF02926 THUMP domain CVS48_27975 PF01430 Hsp33 protein CVS48_27985 PF04977 Septum formation initiator CVS48_27990 PF00113 Enolase, C-terminal TIM barrel domain CVS48_27990 PF03952 Enolase, N-terminal domain CVS48_28005 PF00117 Glutamine amidotransferase class-I CVS48_28005 PF06418 CTP synthase N-terminus CVS48_28015 PF00665 Integrase core domain CVS48_28020 PF00557 Metallopeptidase family M24 CVS48_28020 PF01321 Creatinase/Prolidase N-terminal domain CVS48_28030 PF03576 Peptidase family S58 CVS48_28035 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_28035 PF12911 N-terminal TM domain of oligopeptide transport permease C CVS48_28040 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_28045 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CVS48_28050 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS48_28050 PF00005 ABC transporter CVS48_28055 PF01112 Asparaginase CVS48_28065 PF13673 Acetyltransferase (GNAT) domain CVS48_28070 PF01144 Coenzyme A transferase CVS48_28075 PF01144 Coenzyme A transferase CVS48_28105 PF00005 ABC transporter CVS48_28105 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS48_28110 PF12911 N-terminal TM domain of oligopeptide transport permease C CVS48_28110 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_28115 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_28120 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CVS48_28130 PF00392 Bacterial regulatory proteins, gntR family CVS48_28130 PF07729 FCD domain CVS48_28135 PF00202 Aminotransferase class-III CVS48_28140 PF01212 Beta-eliminating lyase CVS48_28145 PF00892 EamA-like transporter family CVS48_28160 PF03928 Haem-degrading CVS48_28165 PF00501 AMP-binding enzyme CVS48_28165 PF16177 Acetyl-coenzyme A synthetase N-terminus CVS48_28165 PF13193 AMP-binding enzyme C-terminal domain CVS48_28170 PF00877 NlpC/P60 family CVS48_28180 PF03466 LysR substrate binding domain CVS48_28180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_28185 PF00171 Aldehyde dehydrogenase family CVS48_28195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_28205 PF00883 Cytosol aminopeptidase family, catalytic domain CVS48_28205 PF02789 Cytosol aminopeptidase family, N-terminal domain CVS48_28220 PF01027 Inhibitor of apoptosis-promoting Bax1 CVS48_28225 PF00248 Aldo/keto reductase family CVS48_28235 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_28245 PF00291 Pyridoxal-phosphate dependent enzyme CVS48_28255 PF11967 Recombination protein O N terminal CVS48_28255 PF02565 Recombination protein O C terminal CVS48_28260 PF07650 KH domain CVS48_28260 PF01926 50S ribosome-binding GTPase CVS48_28265 PF14622 Ribonuclease-III-like CVS48_28265 PF00035 Double-stranded RNA binding motif CVS48_28270 PF10502 Signal peptidase, peptidase S26 CVS48_28275 PF06421 GTP-binding protein LepA C-terminus CVS48_28275 PF00679 Elongation factor G C-terminus CVS48_28275 PF03144 Elongation factor Tu domain 2 CVS48_28275 PF00009 Elongation factor Tu GTP binding domain CVS48_28280 PF13180 PDZ domain CVS48_28295 PF04542 Sigma-70 region 2 CVS48_28295 PF08281 Sigma-70, region 4 CVS48_28305 PF00109 Beta-ketoacyl synthase, N-terminal domain CVS48_28305 PF02801 Beta-ketoacyl synthase, C-terminal domain CVS48_28310 PF00550 Phosphopantetheine attachment site CVS48_28320 PF00698 Acyl transferase domain CVS48_28325 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CVS48_28325 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CVS48_28330 PF02504 Fatty acid synthesis protein CVS48_28335 PF01783 Ribosomal L32p protein family CVS48_28340 PF02620 Large ribosomal RNA subunit accumulation protein YceD CVS48_28345 PF02545 Maf-like protein CVS48_28350 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CVS48_28355 PF01510 N-acetylmuramoyl-L-alanine amidase CVS48_28360 PF01794 Ferric reductase like transmembrane component CVS48_28365 PF00174 Oxidoreductase molybdopterin binding domain CVS48_28375 PF00849 RNA pseudouridylate synthase CVS48_28375 PF01479 S4 domain CVS48_28380 PF00575 S1 RNA binding domain CVS48_28380 PF10150 Ribonuclease E/G family CVS48_28380 PF12111 Polyribonucleotide phosphorylase C terminal CVS48_28385 PF09411 Lipid A 3-O-deacylase (PagL) CVS48_28390 PF17848 Acetyl-coA carboxylase zinc finger domain CVS48_28390 PF01039 Carboxyl transferase domain CVS48_28395 PF00290 Tryptophan synthase alpha chain CVS48_28400 PF00291 Pyridoxal-phosphate dependent enzyme CVS48_28405 PF01546 Peptidase family M20/M25/M40 CVS48_28405 PF07687 Peptidase dimerisation domain CVS48_28410 PF07690 Major Facilitator Superfamily CVS48_28415 PF13291 ACT domain CVS48_28415 PF04607 Region found in RelA / SpoT proteins CVS48_28415 PF02824 TGS domain CVS48_28420 PF06167 Glucose-regulated metallo-peptidase M90 CVS48_28430 PF01042 Endoribonuclease L-PSP CVS48_28435 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CVS48_28435 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CVS48_28440 PF00037 4Fe-4S binding domain CVS48_28440 PF11953 Domain of unknown function (DUF3470) CVS48_28445 PF00175 Oxidoreductase NAD-binding domain CVS48_28445 PF00970 Oxidoreductase FAD-binding domain CVS48_28455 PF04060 Putative Fe-S cluster CVS48_28460 PF00730 HhH-GPD superfamily base excision DNA repair protein CVS48_28460 PF10576 Iron-sulfur binding domain of endonuclease III CVS48_28460 PF00633 Helix-hairpin-helix motif CVS48_28465 PF12399 Branched-chain amino acid ATP-binding cassette transporter CVS48_28465 PF00005 ABC transporter CVS48_28470 PF00005 ABC transporter CVS48_28480 PF02653 Branched-chain amino acid transport system / permease component CVS48_28495 PF01063 Amino-transferase class IV CVS48_28500 PF00005 ABC transporter CVS48_28505 PF12399 Branched-chain amino acid ATP-binding cassette transporter CVS48_28505 PF00005 ABC transporter CVS48_28520 PF02632 BioY family CVS48_28525 PF02361 Cobalt transport protein CVS48_28530 PF00005 ABC transporter CVS48_28535 PF01641 SelR domain CVS48_28540 PF04279 Intracellular septation protein A CVS48_28555 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CVS48_28555 PF03120 NAD-dependent DNA ligase OB-fold domain CVS48_28555 PF12826 Helix-hairpin-helix motif CVS48_28555 PF01653 NAD-dependent DNA ligase adenylation domain CVS48_28555 PF00533 BRCA1 C Terminus (BRCT) domain CVS48_28565 PF02463 RecF/RecN/SMC N terminal domain CVS48_28565 PF06470 SMC proteins Flexible Hinge Domain CVS48_28570 PF07690 Major Facilitator Superfamily CVS48_28575 PF03167 Uracil DNA glycosylase superfamily CVS48_28580 PF00814 Glycoprotease family CVS48_28585 PF00072 Response regulator receiver domain CVS48_28585 PF00486 Transcriptional regulatory protein, C terminal CVS48_28590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_28590 PF00512 His Kinase A (phospho-acceptor) domain CVS48_28590 PF00672 HAMP domain CVS48_28595 PF00578 AhpC/TSA family CVS48_28600 PF02627 Carboxymuconolactone decarboxylase family CVS48_28610 PF02542 YgbB family CVS48_28615 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CVS48_28620 PF17757 UvrB interaction domain CVS48_28620 PF00270 DEAD/DEAH box helicase CVS48_28620 PF00271 Helicase conserved C-terminal domain CVS48_28620 PF03461 TRCF domain CVS48_28620 PF02559 CarD-like/TRCF domain CVS48_28630 PF07715 TonB-dependent Receptor Plug Domain CVS48_28630 PF00593 TonB dependent receptor CVS48_28640 PF00361 Proton-conducting membrane transporter CVS48_28645 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus CVS48_28645 PF00361 Proton-conducting membrane transporter CVS48_28650 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CVS48_28650 PF00361 Proton-conducting membrane transporter CVS48_28655 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CVS48_28660 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CVS48_28665 PF12838 4Fe-4S dicluster domain CVS48_28670 PF00146 NADH dehydrogenase CVS48_28675 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal CVS48_28675 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CVS48_28675 PF00384 Molybdopterin oxidoreductase CVS48_28680 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CVS48_28680 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CVS48_28680 PF10531 SLBB domain CVS48_28690 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CVS48_28695 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CVS48_28700 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CVS48_28705 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CVS48_28710 PF13609 Gram-negative porin CVS48_28735 PF00149 Calcineurin-like phosphoesterase CVS48_28740 PF00781 Diacylglycerol kinase catalytic domain CVS48_28750 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CVS48_28755 PF03466 LysR substrate binding domain CVS48_28755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_28765 PF02321 Outer membrane efflux protein CVS48_28770 PF00873 AcrB/AcrD/AcrF family CVS48_28775 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CVS48_28780 PF02028 BCCT, betaine/carnitine/choline family transporter CVS48_28790 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CVS48_28795 PF00873 AcrB/AcrD/AcrF family CVS48_28800 PF02321 Outer membrane efflux protein CVS48_28810 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CVS48_28815 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CVS48_28825 PF00005 ABC transporter CVS48_28825 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS48_28830 PF12911 N-terminal TM domain of oligopeptide transport permease C CVS48_28830 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_28835 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_28845 PF05661 Protein of unknown function (DUF808) CVS48_28855 PF00313 'Cold-shock' DNA-binding domain CVS48_28880 PF00106 short chain dehydrogenase CVS48_28885 PF03600 Citrate transporter CVS48_28890 PF00072 Response regulator receiver domain CVS48_28890 PF00486 Transcriptional regulatory protein, C terminal CVS48_28895 PF08521 Two-component sensor kinase N-terminal CVS48_28895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_28895 PF00512 His Kinase A (phospho-acceptor) domain CVS48_28915 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_28925 PF01804 Penicillin amidase CVS48_28945 PF13086 AAA domain CVS48_28945 PF13087 AAA domain CVS48_28945 PF13195 Protein of unknown function (DUF4011) CVS48_28945 PF13086 AAA domain CVS48_28945 PF13087 AAA domain CVS48_28945 PF13195 Protein of unknown function (DUF4011) CVS48_28960 PF13185 GAF domain CVS48_28960 PF00990 Diguanylate cyclase, GGDEF domain CVS48_28970 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_28980 PF01494 FAD binding domain CVS48_28990 PF13350 Tyrosine phosphatase family CVS48_29010 PF07715 TonB-dependent Receptor Plug Domain CVS48_29010 PF00593 TonB dependent receptor CVS48_29020 PF04542 Sigma-70 region 2 CVS48_29020 PF08281 Sigma-70, region 4 CVS48_29025 PF03840 Preprotein translocase SecG subunit CVS48_29030 PF00121 Triosephosphate isomerase CVS48_29035 PF08240 Alcohol dehydrogenase GroES-like domain CVS48_29035 PF14765 Polyketide synthase dehydratase CVS48_29035 PF00550 Phosphopantetheine attachment site CVS48_29035 PF08659 KR domain CVS48_29035 PF16197 Ketoacyl-synthetase C-terminal extension CVS48_29035 PF00698 Acyl transferase domain CVS48_29035 PF00109 Beta-ketoacyl synthase, N-terminal domain CVS48_29035 PF02801 Beta-ketoacyl synthase, C-terminal domain CVS48_29045 PF00682 HMGL-like CVS48_29050 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_29055 PF02515 CoA-transferase family III CVS48_29080 PF01970 Tripartite tricarboxylate transporter TctA family CVS48_29090 PF13291 ACT domain CVS48_29090 PF00291 Pyridoxal-phosphate dependent enzyme CVS48_29100 PF03725 3' exoribonuclease family, domain 2 CVS48_29100 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CVS48_29100 PF00013 KH domain CVS48_29100 PF00575 S1 RNA binding domain CVS48_29100 PF01138 3' exoribonuclease family, domain 1 CVS48_29105 PF00312 Ribosomal protein S15 CVS48_29115 PF01066 CDP-alcohol phosphatidyltransferase CVS48_29120 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CVS48_29120 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CVS48_29125 PF10369 Small subunit of acetolactate synthase