CVS48_00015 PF13432 Tetratricopeptide repeat CVS48_00030 PF07331 CVS48_00030 CVS48_00035 PF00291 Pyridoxal-phosphate dependent enzyme CVS48_00035 PF01842 ACT domain CVS48_00045 PF00013 KH domain CVS48_00045 PF00575 S1 RNA binding domain CVS48_00045 PF01138 3' exoribonuclease family, domain 1 CVS48_00045 PF03725 3' exoribonuclease family, domain 2 CVS48_00045 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CVS48_00050 PF00312 Ribosomal protein S15 CVS48_00060 PF01066 CDP-alcohol phosphatidyltransferase CVS48_00065 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CVS48_00065 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain CVS48_00070 PF10369 Small subunit of acetolactate synthase CVS48_00070 PF13710 ACT domain CVS48_00075 PF00205 Thiamine pyrophosphate enzyme, central domain CVS48_00075 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CVS48_00075 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CVS48_00080 PF12805 CVS48_00080 CVS48_00080 PF13515 CVS48_00080 CVS48_00090 PF03883 CVS48_00090 CVS48_00095 PF13561 Enoyl-(Acyl carrier protein) reductase CVS48_00100 PF00999 Sodium/hydrogen exchanger family CVS48_00125 PF10011 Predicted membrane protein (DUF2254) CVS48_00130 PF01613 Flavin reductase like domain CVS48_00135 PF00795 Carbon-nitrogen hydrolase CVS48_00140 PF00083 Sugar (and other) transporter CVS48_00145 PF01614 Bacterial transcriptional regulator CVS48_00145 PF09339 IclR helix-turn-helix domain CVS48_00150 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_00155 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CVS48_00155 PF13378 Enolase C-terminal domain-like CVS48_00160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_00160 PF03466 LysR substrate binding domain CVS48_00165 PF07969 Amidohydrolase family CVS48_00190 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CVS48_00190 PF02403 Seryl-tRNA synthetase N-terminal domain CVS48_00195 PF05496 Holliday junction DNA helicase ruvB N-terminus CVS48_00195 PF12002 MgsA AAA+ ATPase C terminal CVS48_00195 PF16193 CVS48_00195 CVS48_00200 PF00795 Carbon-nitrogen hydrolase CVS48_00205 PF01168 Alanine racemase, N-terminal domain CVS48_00205 PF14031 Putative serine dehydratase domain CVS48_00210 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CVS48_00215 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_00220 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_00220 PF12911 CVS48_00220 CVS48_00225 PF00005 ABC transporter CVS48_00225 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS48_00230 PF00005 ABC transporter CVS48_00230 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS48_00235 PF01380 SIS domain CVS48_00235 PF01418 Helix-turn-helix domain, rpiR family CVS48_00240 PF07969 Amidohydrolase family CVS48_00245 PF01042 Endoribonuclease L-PSP CVS48_00250 PF03548 Outer membrane lipoprotein carrier protein LolA CVS48_00255 PF01580 FtsK/SpoIIIE family CVS48_00255 PF09397 Ftsk gamma domain CVS48_00255 PF13491 CVS48_00255 CVS48_00260 PF07992 Pyridine nucleotide-disulphide oxidoreductase CVS48_00265 PF01713 Smr domain CVS48_00270 PF00893 Small Multidrug Resistance protein CVS48_00285 PF00474 Sodium:solute symporter family CVS48_00290 PF13937 CVS48_00290 CVS48_00295 PF09604 CVS48_00295 CVS48_00300 PF03814 CVS48_00300 CVS48_00305 PF00122 E1-E2 ATPase CVS48_00305 PF00702 haloacid dehalogenase-like hydrolase CVS48_00310 PF02669 CVS48_00310 CVS48_00315 PF00512 His Kinase A (phospho-acceptor) domain CVS48_00315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_00315 PF02702 Osmosensitive K+ channel His kinase sensor domain CVS48_00315 PF13492 GAF domain CVS48_00315 PF13493 Domain of unknown function (DUF4118) CVS48_00320 PF00072 Response regulator receiver domain CVS48_00320 PF00486 Transcriptional regulatory protein, C terminal CVS48_00325 PF09694 CVS48_00325 CVS48_00335 PF00701 Dihydrodipicolinate synthetase family CVS48_00340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CVS48_00340 PF00672 HAMP domain CVS48_00340 PF17200 CVS48_00340 CVS48_00345 PF04932 CVS48_00345 CVS48_00350 PF00180 Isocitrate/isopropylmalate dehydrogenase CVS48_00355 PF08897 CVS48_00355 CVS48_00360 PF00034 Cytochrome c CVS48_00365 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CVS48_00370 PF00004 ATPase family associated with various cellular activities (AAA) CVS48_00375 PF05762 VWA domain containing CoxE-like protein CVS48_00380 PF13420 Acetyltransferase (GNAT) domain CVS48_00390 PF13302 Acetyltransferase (GNAT) domain CVS48_00395 PF00675 Insulinase (Peptidase family M16) CVS48_00395 PF05193 Peptidase M16 inactive domain CVS48_00400 PF13663 CVS48_00400 CVS48_00410 PF00226 DnaJ domain CVS48_00410 PF00684 DnaJ central domain CVS48_00410 PF01556 DnaJ C terminal domain CVS48_00415 PF00012 Hsp70 protein CVS48_00425 PF01025 GrpE CVS48_00435 PF00762 Ferrochelatase CVS48_00440 PF01628 HrcA protein C terminal domain CVS48_00440 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding CVS48_00445 PF01513 ATP-NAD kinase CVS48_00450 PF02463 RecF/RecN/SMC N terminal domain CVS48_00455 PF01475 Ferric uptake regulator family CVS48_00460 PF04355 SmpA / OmlA family CVS48_00465 PF01113 Dihydrodipicolinate reductase, N-terminus CVS48_00465 PF05173 Dihydrodipicolinate reductase, C-terminus CVS48_00470 PF01565 FAD binding domain CVS48_00470 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CVS48_00480 PF00589 Phage integrase family CVS48_00480 PF13356 Domain of unknown function (DUF4102) CVS48_00485 PF00665 Integrase core domain CVS48_00485 PF13384 Homeodomain-like domain CVS48_00490 PF01695 IstB-like ATP binding protein CVS48_00500 PF02321 Outer membrane efflux protein CVS48_00530 PF00072 Response regulator receiver domain CVS48_00530 PF00486 Transcriptional regulatory protein, C terminal CVS48_00535 PF00512 His Kinase A (phospho-acceptor) domain CVS48_00535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_00545 PF12840 Helix-turn-helix domain CVS48_00555 PF01451 Low molecular weight phosphotyrosine protein phosphatase CVS48_00560 PF01758 Sodium Bile acid symporter family CVS48_00565 PF03960 ArsC family CVS48_00570 PF03551 Transcriptional regulator PadR-like family CVS48_00575 PF02417 CVS48_00575 CVS48_00580 PF13527 Acetyltransferase (GNAT) domain CVS48_00595 PF13533 Biotin-lipoyl like CVS48_00600 PF07514 Putative helicase CVS48_00600 PF07515 Protein of unknown function (DUF1528) CVS48_00615 PF08808 CVS48_00615 CVS48_00620 PF12553 CVS48_00620 CVS48_00625 PF07916 CVS48_00625 CVS48_00640 PF06834 CVS48_00640 CVS48_00645 PF07511 CVS48_00645 CVS48_00650 PF04002 RadC-like JAB domain CVS48_00655 PF13462 Thioredoxin CVS48_00660 PF11130 CVS48_00660 CVS48_00675 PF11920 CVS48_00675 CVS48_00680 PF11444 CVS48_00680 CVS48_00685 PF11990 CVS48_00685 CVS48_00690 PF11190 CVS48_00690 CVS48_00695 PF11660 CVS48_00695 CVS48_00700 PF09686 CVS48_00700 CVS48_00705 PF12728 Helix-turn-helix domain CVS48_00710 PF13470 CVS48_00710 CVS48_00715 PF00004 ATPase family associated with various cellular activities (AAA) CVS48_00730 PF01909 Nucleotidyltransferase domain CVS48_00740 PF13476 AAA domain CVS48_00745 PF14348 CVS48_00745 CVS48_00750 PF12696 TraM recognition site of TraD and TraG CVS48_00755 PF11072 CVS48_00755 CVS48_00760 PF01464 Transglycosylase SLT domain CVS48_00780 PF00271 Helicase conserved C-terminal domain CVS48_00820 PF11679 CVS48_00820 CVS48_00825 PF06067 CVS48_00825 CVS48_00830 PF12101 CVS48_00830 CVS48_00840 PF11284 CVS48_00840 CVS48_00850 PF00403 Heavy-metal-associated domain CVS48_00850 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CVS48_00850 PF07992 Pyridine nucleotide-disulphide oxidoreductase CVS48_00855 PF00403 Heavy-metal-associated domain CVS48_00860 PF02411 CVS48_00860 CVS48_00865 PF00376 MerR family regulatory protein CVS48_00865 PF09278 MerR, DNA binding CVS48_00910 PF01252 CVS48_00910 CVS48_00915 PF00122 E1-E2 ATPase CVS48_00915 PF00403 Heavy-metal-associated domain CVS48_00915 PF00702 haloacid dehalogenase-like hydrolase CVS48_00920 PF00376 MerR family regulatory protein CVS48_00920 PF09278 MerR, DNA binding CVS48_00930 PF01545 Cation efflux family CVS48_00935 PF01131 DNA topoisomerase CVS48_00935 PF01396 CVS48_00935 CVS48_00935 PF01751 Toprim domain CVS48_00940 PF00436 Single-strand binding protein family CVS48_00945 PF11358 CVS48_00945 CVS48_00950 PF08900 CVS48_00950 CVS48_00960 PF11198 CVS48_00960 CVS48_00975 PF13614 AAA domain CVS48_00980 PF05930 Prophage CP4-57 regulatory protein (AlpA) CVS48_00990 PF03713 Domain of unknown function (DUF305) CVS48_01000 PF00082 Subtilase family CVS48_01005 PF03067 Chitin binding domain CVS48_01010 PF03067 Chitin binding domain CVS48_01015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_01020 PF00072 Response regulator receiver domain CVS48_01020 PF00486 Transcriptional regulatory protein, C terminal CVS48_01030 PF07963 Prokaryotic N-terminal methylation motif CVS48_01035 PF07963 Prokaryotic N-terminal methylation motif CVS48_01040 PF00263 CVS48_01040 CVS48_01040 PF03958 Bacterial type II/III secretion system short domain CVS48_01065 PF00437 Type II/IV secretion system protein CVS48_01065 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CVS48_01070 PF00482 Type II secretion system (T2SS), protein F CVS48_01075 PF01464 Transglycosylase SLT domain CVS48_01080 PF07963 Prokaryotic N-terminal methylation motif CVS48_01080 PF08334 Type II secretion system (T2SS), protein G CVS48_01085 PF01292 Prokaryotic cytochrome b561 CVS48_01095 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system CVS48_01100 PF13470 CVS48_01100 CVS48_01105 PF04268 Sarcosine oxidase, gamma subunit family CVS48_01110 PF01571 Aminomethyltransferase folate-binding domain CVS48_01110 PF07992 Pyridine nucleotide-disulphide oxidoreductase CVS48_01110 PF08669 Glycine cleavage T-protein C-terminal barrel domain CVS48_01110 PF13510 2Fe-2S iron-sulfur cluster binding domain CVS48_01115 PF04267 Sarcosine oxidase, delta subunit family CVS48_01120 PF01266 FAD dependent oxidoreductase CVS48_01125 PF00107 Zinc-binding dehydrogenase CVS48_01125 PF08240 Alcohol dehydrogenase GroES-like domain CVS48_01130 PF01965 DJ-1/PfpI family CVS48_01130 PF12833 Helix-turn-helix domain CVS48_01135 PF00111 2Fe-2S iron-sulfur cluster binding domain CVS48_01135 PF00175 Oxidoreductase NAD-binding domain CVS48_01135 PF00970 Oxidoreductase FAD-binding domain CVS48_01140 PF00355 Rieske [2Fe-2S] domain CVS48_01140 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CVS48_01145 PF01012 Electron transfer flavoprotein domain CVS48_01150 PF00766 Electron transfer flavoprotein FAD-binding domain CVS48_01150 PF01012 Electron transfer flavoprotein domain CVS48_01155 PF02754 CVS48_01155 CVS48_01155 PF11982 CVS48_01155 CVS48_01155 PF13183 4Fe-4S dicluster domain CVS48_01160 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CVS48_01160 PF07992 Pyridine nucleotide-disulphide oxidoreductase CVS48_01165 PF02830 V4R domain CVS48_01170 PF01244 Membrane dipeptidase (Peptidase family M19) CVS48_01175 PF00464 Serine hydroxymethyltransferase CVS48_01195 PF00501 AMP-binding enzyme CVS48_01195 PF13193 AMP-binding enzyme C-terminal domain CVS48_01200 PF01636 Phosphotransferase enzyme family CVS48_01205 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CVS48_01205 PF02770 Acyl-CoA dehydrogenase, middle domain CVS48_01205 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CVS48_01210 PF13561 Enoyl-(Acyl carrier protein) reductase CVS48_01220 PF07287 CVS48_01220 CVS48_01225 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_01230 PF13380 CoA binding domain CVS48_01230 PF13549 ATP-grasp domain CVS48_01230 PF13607 Succinyl-CoA ligase like flavodoxin domain CVS48_01235 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_01240 PF01796 CVS48_01240 CVS48_01240 PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) CVS48_01245 PF00108 Thiolase, N-terminal domain CVS48_01250 PF01614 Bacterial transcriptional regulator CVS48_01250 PF09339 IclR helix-turn-helix domain CVS48_01260 PF11161 CVS48_01260 CVS48_01265 PF07681 CVS48_01265 CVS48_01270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_01270 PF03466 LysR substrate binding domain CVS48_01275 PF00293 NUDIX domain CVS48_01275 PF14803 Nudix N-terminal CVS48_01280 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CVS48_01285 PF04376 CVS48_01285 CVS48_01285 PF04377 CVS48_01285 CVS48_01290 PF01180 Dihydroorotate dehydrogenase CVS48_01295 PF09361 CVS48_01295 CVS48_01300 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_01305 PF01614 Bacterial transcriptional regulator CVS48_01305 PF09339 IclR helix-turn-helix domain CVS48_01310 PF00994 Probable molybdopterin binding domain CVS48_01315 PF07264 Etoposide-induced protein 2 CVS48_01320 PF00085 Thioredoxin CVS48_01325 PF00270 DEAD/DEAH box helicase CVS48_01325 PF00271 Helicase conserved C-terminal domain CVS48_01330 PF05437 CVS48_01330 CVS48_01335 PF03591 CVS48_01335 CVS48_01340 PF10276 Zinc-finger domain CVS48_01345 PF13474 SnoaL-like domain CVS48_01350 PF00561 alpha/beta hydrolase fold CVS48_01355 PF01435 Peptidase family M48 CVS48_01360 PF00483 Nucleotidyl transferase CVS48_01365 PF09678 CVS48_01365 CVS48_01370 PF13609 Gram-negative porin CVS48_01375 PF00122 E1-E2 ATPase CVS48_01375 PF00689 Cation transporting ATPase, C-terminus CVS48_01375 PF00690 Cation transporter/ATPase, N-terminus CVS48_01375 PF00702 haloacid dehalogenase-like hydrolase CVS48_01385 PF01699 Sodium/calcium exchanger protein CVS48_01390 PF00557 Metallopeptidase family M24 CVS48_01390 PF05195 Aminopeptidase P, N-terminal domain CVS48_01400 PF01494 FAD binding domain CVS48_01405 PF01207 Dihydrouridine synthase (Dus) CVS48_01410 PF02954 Bacterial regulatory protein, Fis family CVS48_01415 PF01808 AICARFT/IMPCHase bienzyme CVS48_01415 PF02142 MGS-like domain CVS48_01420 PF02075 Crossover junction endodeoxyribonuclease RuvC CVS48_01425 PF01330 RuvA N terminal domain CVS48_01425 PF07499 RuvA, C-terminal domain CVS48_01425 PF14520 Helix-hairpin-helix domain CVS48_01430 PF01370 NAD dependent epimerase/dehydratase family CVS48_01435 PF00291 Pyridoxal-phosphate dependent enzyme CVS48_01440 PF05491 Holliday junction DNA helicase ruvB C-terminus CVS48_01440 PF05496 Holliday junction DNA helicase ruvB N-terminus CVS48_01445 PF00672 HAMP domain CVS48_01445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_01450 PF00072 Response regulator receiver domain CVS48_01450 PF00486 Transcriptional regulatory protein, C terminal CVS48_01460 PF00270 DEAD/DEAH box helicase CVS48_01460 PF00271 Helicase conserved C-terminal domain CVS48_01460 PF00570 HRDC domain CVS48_01460 PF09382 RQC domain CVS48_01460 PF16124 CVS48_01460 CVS48_01465 PF02322 CVS48_01465 CVS48_01470 PF01654 CVS48_01470 CVS48_01475 PF00749 tRNA synthetases class I (E and Q), catalytic domain CVS48_01475 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CVS48_01480 PF03775 Septum formation inhibitor MinC, C-terminal domain CVS48_01480 PF05209 Septum formation inhibitor MinC, N-terminal domain CVS48_01485 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CVS48_01490 PF03776 Septum formation topological specificity factor MinE CVS48_01495 PF05433 CVS48_01495 CVS48_01500 PF00857 Isochorismatase family CVS48_01510 PF09957 CVS48_01510 CVS48_01515 PF00005 ABC transporter CVS48_01515 PF12848 ABC transporter CVS48_01520 PF00892 EamA-like transporter family CVS48_01530 PF00005 ABC transporter CVS48_01530 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS48_01535 PF00005 ABC transporter CVS48_01535 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS48_01540 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_01545 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_01550 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CVS48_01555 PF12802 MarR family CVS48_01560 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CVS48_01565 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CVS48_01570 PF00111 2Fe-2S iron-sulfur cluster binding domain CVS48_01570 PF00175 Oxidoreductase NAD-binding domain CVS48_01575 PF00355 Rieske [2Fe-2S] domain CVS48_01575 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CVS48_01580 PF00866 Ring hydroxylating beta subunit CVS48_01585 PF00501 AMP-binding enzyme CVS48_01585 PF13193 AMP-binding enzyme C-terminal domain CVS48_01595 PF00106 short chain dehydrogenase CVS48_01595 PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) CVS48_01600 PF04199 Putative cyclase CVS48_01605 PF13561 Enoyl-(Acyl carrier protein) reductase CVS48_01610 PF13458 Periplasmic binding protein CVS48_01615 PF02653 CVS48_01615 CVS48_01620 PF00005 ABC transporter CVS48_01620 PF02653 CVS48_01620 CVS48_01620 PF12399 Branched-chain amino acid ATP-binding cassette transporter CVS48_01625 PF00005 ABC transporter CVS48_01630 PF00535 Glycosyl transferase family 2 CVS48_01635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_01635 PF03466 LysR substrate binding domain CVS48_01640 PF00294 pfkB family carbohydrate kinase CVS48_01645 PF01081 KDPG and KHG aldolase CVS48_01650 PF01614 Bacterial transcriptional regulator CVS48_01650 PF09339 IclR helix-turn-helix domain CVS48_01655 PF00005 ABC transporter CVS48_01660 PF00425 chorismate binding enzyme CVS48_01670 PF01063 Aminotransferase class IV CVS48_01675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_01675 PF03466 LysR substrate binding domain CVS48_01680 PF00355 Rieske [2Fe-2S] domain CVS48_01680 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CVS48_01685 PF00866 Ring hydroxylating beta subunit CVS48_01690 PF00355 Rieske [2Fe-2S] domain CVS48_01695 PF00899 ThiF family CVS48_01700 PF02321 Outer membrane efflux protein CVS48_01705 PF00005 ABC transporter CVS48_01705 PF02687 CVS48_01705 CVS48_01705 PF12704 MacB-like periplasmic core domain CVS48_01710 PF16576 CVS48_01710 CVS48_01715 PF07690 Major Facilitator Superfamily CVS48_01720 PF04752 CVS48_01720 CVS48_01725 PF01243 Pyridoxamine 5'-phosphate oxidase CVS48_01725 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CVS48_01730 PF01613 Flavin reductase like domain CVS48_01735 PF01266 FAD dependent oxidoreductase CVS48_01740 PF00551 Formyl transferase CVS48_01740 PF01842 ACT domain CVS48_01745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_01745 PF03466 LysR substrate binding domain CVS48_01750 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CVS48_01750 PF02770 Acyl-CoA dehydrogenase, middle domain CVS48_01755 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_01760 PF02515 CoA-transferase family III CVS48_01765 PF13520 Amino acid permease CVS48_01770 PF01019 Gamma-glutamyltranspeptidase CVS48_01775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_01775 PF03466 LysR substrate binding domain CVS48_01780 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_01785 PF03547 CVS48_01785 CVS48_01790 PF00206 Lyase CVS48_01790 PF10415 Fumarase C C-terminus CVS48_01795 PF02367 Uncharacterised P-loop hydrolase UPF0079 CVS48_01800 PF01520 N-acetylmuramoyl-L-alanine amidase CVS48_01800 PF11741 AMIN domain CVS48_01805 PF09335 CVS48_01805 CVS48_01810 PF01119 DNA mismatch repair protein, C-terminal domain CVS48_01810 PF08676 MutL C terminal dimerisation domain CVS48_01810 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_01815 PF01715 IPP transferase CVS48_01820 PF00586 AIR synthase related protein, N-terminal domain CVS48_01820 PF02769 AIR synthase related protein, C-terminal domain CVS48_01825 PF00308 Bacterial dnaA protein CVS48_01830 PF12710 haloacid dehalogenase-like hydrolase CVS48_01835 PF01743 Poly A polymerase head domain CVS48_01835 PF12626 Polymerase A arginine-rich C-terminus CVS48_01835 PF12627 Probable RNA and SrmB- binding site of polymerase A CVS48_01840 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CVS48_01845 PF00294 pfkB family carbohydrate kinase CVS48_01850 PF03328 HpcH/HpaI aldolase/citrate lyase family CVS48_01855 PF02515 CoA-transferase family III CVS48_01860 PF13452 N-terminal half of MaoC dehydratase CVS48_01865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_01865 PF03466 LysR substrate binding domain CVS48_01870 PF00378 Enoyl-CoA hydratase/isomerase family CVS48_01875 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CVS48_01875 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CVS48_01880 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CVS48_01880 PF02770 Acyl-CoA dehydrogenase, middle domain CVS48_01880 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CVS48_01885 PF01796 CVS48_01885 CVS48_01885 PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) CVS48_01890 PF02803 Thiolase, C-terminal domain CVS48_01895 PF00501 AMP-binding enzyme CVS48_01895 PF13193 AMP-binding enzyme C-terminal domain CVS48_01900 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_01905 PF03060 Nitronate monooxygenase CVS48_01910 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_01915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_01915 PF03466 LysR substrate binding domain CVS48_01920 PF00106 short chain dehydrogenase CVS48_01925 PF01575 MaoC like domain CVS48_01925 PF13452 N-terminal half of MaoC dehydratase CVS48_01930 PF02515 CoA-transferase family III CVS48_01935 PF05681 CVS48_01935 CVS48_01935 PF05683 Fumarase C-terminus CVS48_01945 PF00378 Enoyl-CoA hydratase/isomerase family CVS48_01950 PF02091 Glycyl-tRNA synthetase alpha subunit CVS48_01955 PF02092 CVS48_01955 CVS48_01955 PF05746 DALR anticodon binding domain CVS48_01960 PF13242 HAD-hyrolase-like CVS48_01965 PF01553 Acyltransferase CVS48_01970 PF01863 Protein of unknown function DUF45 CVS48_01975 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CVS48_01980 PF01327 Polypeptide deformylase CVS48_01990 PF07670 Nucleoside recognition CVS48_01995 PF00224 Pyruvate kinase, barrel domain CVS48_01995 PF02887 Pyruvate kinase, alpha/beta domain CVS48_02000 PF02595 Glycerate kinase family CVS48_02005 PF00398 Ribosomal RNA adenine dimethylase CVS48_02010 PF00639 PPIC-type PPIASE domain CVS48_02010 PF09312 SurA N-terminal domain CVS48_02010 PF13616 PPIC-type PPIASE domain CVS48_02015 PF04453 Organic solvent tolerance protein CVS48_02020 PF01636 Phosphotransferase enzyme family CVS48_02025 PF00483 Nucleotidyl transferase CVS48_02035 PF01494 FAD binding domain CVS48_02045 PF12802 MarR family CVS48_02050 PF01329 Pterin 4 alpha carbinolamine dehydratase CVS48_02055 PF00691 OmpA family CVS48_02055 PF13441 CVS48_02055 CVS48_02070 PF13503 CVS48_02070 CVS48_02080 PF05954 Phage late control gene D protein (GPD) CVS48_02080 PF10106 CVS48_02080 CVS48_02080 PF13296 CVS48_02080 CVS48_02085 PF00004 ATPase family associated with various cellular activities (AAA) CVS48_02085 PF02861 Clp amino terminal domain CVS48_02085 PF07724 AAA domain (Cdc48 subfamily) CVS48_02085 PF10431 C-terminal, D2-small domain, of ClpB protein CVS48_02090 PF06996 CVS48_02090 CVS48_02095 PF05947 CVS48_02095 CVS48_02100 PF04965 Gene 25-like lysozyme CVS48_02105 PF05638 Protein of unknown function (DUF796) CVS48_02110 PF05943 CVS48_02110 CVS48_02115 PF05591 CVS48_02115 CVS48_02125 PF12790 Type VI secretion lipoprotein CVS48_02130 PF05936 CVS48_02130 CVS48_02135 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) CVS48_02140 PF05954 Phage late control gene D protein (GPD) CVS48_02140 PF10106 CVS48_02140 CVS48_02140 PF13296 CVS48_02140 CVS48_02150 PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) CVS48_02155 PF11745 CVS48_02155 CVS48_02160 PF13503 CVS48_02160 CVS48_02165 PF05954 Phage late control gene D protein (GPD) CVS48_02165 PF10106 CVS48_02165 CVS48_02165 PF13296 CVS48_02165 CVS48_02175 PF13539 D-alanyl-D-alanine carboxypeptidase CVS48_02185 PF06744 CVS48_02185 CVS48_02185 PF06761 CVS48_02185 CVS48_02185 PF14331 CVS48_02185 CVS48_02190 PF09867 Uncharacterized protein conserved in bacteria (DUF2094) CVS48_02195 PF00691 OmpA family CVS48_02195 PF04972 BON domain CVS48_02200 PF06812 CVS48_02200 CVS48_02210 PF05488 PAAR motif CVS48_02215 PF01957 NfeD-like C-terminal, partner-binding CVS48_02220 PF01145 SPFH domain / Band 7 family CVS48_02225 PF13744 Helix-turn-helix domain CVS48_02240 PF13561 Enoyl-(Acyl carrier protein) reductase CVS48_02245 PF00440 Bacterial regulatory proteins, tetR family CVS48_02250 PF00990 GGDEF domain CVS48_02250 PF02743 Cache domain CVS48_02255 PF05170 CVS48_02255 CVS48_02260 PF00884 Sulfatase CVS48_02265 PF03352 Methyladenine glycosylase CVS48_02270 PF03692 CVS48_02270 CVS48_02275 PF02311 AraC-like ligand binding domain CVS48_02275 PF12833 Helix-turn-helix domain CVS48_02280 PF01475 Ferric uptake regulator family CVS48_02290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_02290 PF03466 LysR substrate binding domain CVS48_02295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CVS48_02295 PF00672 HAMP domain CVS48_02295 PF02203 Tar ligand binding domain homologue CVS48_02300 PF06689 ClpX C4-type zinc finger CVS48_02305 PF03797 Autotransporter beta-domain CVS48_02310 PF03797 Autotransporter beta-domain CVS48_02320 PF03180 NLPA lipoprotein CVS48_02325 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_02330 PF00005 ABC transporter CVS48_02330 PF09383 NIL domain CVS48_02335 PF01055 Glycosyl hydrolases family 31 CVS48_02340 PF01266 FAD dependent oxidoreductase CVS48_02340 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CVS48_02345 PF00459 Inositol monophosphatase family CVS48_02350 PF00501 AMP-binding enzyme CVS48_02350 PF13193 AMP-binding enzyme C-terminal domain CVS48_02355 PF01546 Peptidase family M20/M25/M40 CVS48_02355 PF07687 Peptidase dimerisation domain CVS48_02360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_02360 PF03466 LysR substrate binding domain CVS48_02365 PF03601 CVS48_02365 CVS48_02370 PF03061 Thioesterase superfamily CVS48_02375 PF00571 CBS domain CVS48_02375 PF01769 Divalent cation transporter CVS48_02375 PF03448 MgtE intracellular N domain CVS48_02380 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP CVS48_02385 PF04752 CVS48_02385 CVS48_02390 PF01037 AsnC family CVS48_02390 PF13412 Winged helix-turn-helix DNA-binding CVS48_02395 PF13561 Enoyl-(Acyl carrier protein) reductase CVS48_02400 PF00205 Thiamine pyrophosphate enzyme, central domain CVS48_02400 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CVS48_02400 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CVS48_02405 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_02410 PF00392 Bacterial regulatory proteins, gntR family CVS48_02410 PF07729 FCD domain CVS48_02415 PF00665 Integrase core domain CVS48_02415 PF13518 Helix-turn-helix domain CVS48_02420 PF13468 Glyoxalase-like domain CVS48_02425 PF01043 SecA preprotein cross-linking domain CVS48_02425 PF02810 SEC-C motif CVS48_02425 PF07516 SecA Wing and Scaffold domain CVS48_02425 PF07517 SecA DEAD-like domain CVS48_02430 PF01551 Peptidase family M23 CVS48_02435 PF05258 CVS48_02435 CVS48_02440 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CVS48_02445 PF00091 Tubulin/FtsZ family, GTPase domain CVS48_02445 PF12327 FtsZ family, C-terminal domain CVS48_02450 PF02491 SHS2 domain inserted in FTSA CVS48_02450 PF14450 Cell division protein FtsA CVS48_02455 PF03799 Cell division protein FtsQ CVS48_02455 PF08478 POTRA domain, FtsQ-type CVS48_02460 PF01820 D-ala D-ala ligase N-terminus CVS48_02460 PF07478 D-ala D-ala ligase C-terminus CVS48_02465 PF01225 Mur ligase family, catalytic domain CVS48_02465 PF02875 Mur ligase family, glutamate ligase domain CVS48_02465 PF08245 Mur ligase middle domain CVS48_02470 PF03033 Glycosyltransferase family 28 N-terminal domain CVS48_02470 PF04101 Glycosyltransferase family 28 C-terminal domain CVS48_02475 PF01098 CVS48_02475 CVS48_02480 PF02875 Mur ligase family, glutamate ligase domain CVS48_02480 PF08245 Mur ligase middle domain CVS48_02485 PF00953 Glycosyl transferase family 4 CVS48_02485 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CVS48_02490 PF01225 Mur ligase family, catalytic domain CVS48_02490 PF02875 Mur ligase family, glutamate ligase domain CVS48_02490 PF08245 Mur ligase middle domain CVS48_02495 PF00905 Penicillin binding protein transpeptidase domain CVS48_02495 PF03717 Penicillin-binding Protein dimerisation domain CVS48_02500 PF04999 CVS48_02500 CVS48_02505 PF01795 MraW methylase family CVS48_02510 PF02381 MraZ protein CVS48_02520 PF00005 ABC transporter CVS48_02520 PF12848 ABC transporter CVS48_02520 PF16326 CVS48_02520 CVS48_02525 PF01979 Amidohydrolase family CVS48_02530 PF01546 Peptidase family M20/M25/M40 CVS48_02530 PF07687 Peptidase dimerisation domain CVS48_02535 PF02201 SWIB/MDM2 domain CVS48_02565 PF01037 AsnC family CVS48_02565 PF13412 Winged helix-turn-helix DNA-binding CVS48_02570 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CVS48_02570 PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal CVS48_02575 PF01625 Peptide methionine sulfoxide reductase CVS48_02580 PF00034 Cytochrome c CVS48_02585 PF00920 Dehydratase family CVS48_02590 PF01790 CVS48_02590 CVS48_02595 PF04402 Protein of unknown function (DUF541) CVS48_02605 PF05164 Cell division protein ZapA CVS48_02615 PF07331 CVS48_02615 CVS48_02625 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CVS48_02625 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CVS48_02630 PF02525 Flavodoxin-like fold CVS48_02635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_02635 PF03466 LysR substrate binding domain CVS48_02640 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CVS48_02645 PF01970 CVS48_02645 CVS48_02650 PF07331 CVS48_02650 CVS48_02660 PF00072 Response regulator receiver domain CVS48_02660 PF00486 Transcriptional regulatory protein, C terminal CVS48_02665 PF00293 NUDIX domain CVS48_02670 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CVS48_02670 PF03129 Anticodon binding domain CVS48_02670 PF04073 Aminoacyl-tRNA editing domain CVS48_02675 PF03061 Thioesterase superfamily CVS48_02680 PF01618 CVS48_02680 CVS48_02685 PF02472 Biopolymer transport protein ExbD/TolR CVS48_02690 PF13103 TonB C terminal CVS48_02695 PF04052 TolB amino-terminal domain CVS48_02695 PF07676 WD40-like Beta Propeller Repeat CVS48_02700 PF00691 OmpA family CVS48_02705 PF13174 Tetratricopeptide repeat CVS48_02705 PF13432 Tetratricopeptide repeat CVS48_02710 PF01032 FecCD transport family CVS48_02715 PF00005 ABC transporter CVS48_02720 PF04073 Aminoacyl-tRNA editing domain CVS48_02725 PF12697 Alpha/beta hydrolase family CVS48_02730 PF00009 Elongation factor Tu GTP binding domain CVS48_02730 PF00679 Elongation factor G C-terminus CVS48_02730 PF03144 Elongation factor Tu domain 2 CVS48_02730 PF03764 Elongation factor G, domain IV CVS48_02730 PF14492 Elongation Factor G, domain II CVS48_02735 PF00582 Universal stress protein family CVS48_02740 PF04273 Putative phosphatase (DUF442) CVS48_02745 PF00155 Aminotransferase class I and II CVS48_02745 PF00392 Bacterial regulatory proteins, gntR family CVS48_02750 PF00892 EamA-like transporter family CVS48_02755 PF01810 CVS48_02755 CVS48_02760 PF12146 Putative lysophospholipase CVS48_02765 PF00392 Bacterial regulatory proteins, gntR family CVS48_02765 PF07729 FCD domain CVS48_02770 PF05232 CVS48_02770 CVS48_02775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_02775 PF03466 LysR substrate binding domain CVS48_02780 PF04794 YdjC-like protein CVS48_02785 PF04138 CVS48_02785 CVS48_02790 PF00535 Glycosyl transferase family 2 CVS48_02795 PF00583 Acetyltransferase (GNAT) family CVS48_02800 PF03616 CVS48_02800 CVS48_02805 PF16868 CVS48_02805 CVS48_02815 PF02639 CVS48_02815 CVS48_02825 PF00929 Exonuclease CVS48_02830 PF00873 AcrB/AcrD/AcrF family CVS48_02835 PF16576 CVS48_02835 CVS48_02840 PF00075 RNase H CVS48_02845 PF08241 Methyltransferase domain CVS48_02850 PF00753 Metallo-beta-lactamase superfamily CVS48_02850 PF16123 CVS48_02850 CVS48_02855 PF01464 Transglycosylase SLT domain CVS48_02855 PF01476 LysM domain CVS48_02860 PF13561 Enoyl-(Acyl carrier protein) reductase CVS48_02865 PF02566 OsmC-like protein CVS48_02870 PF04391 CVS48_02870 CVS48_02875 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_02880 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CVS48_02880 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CVS48_02895 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CVS48_02895 PF02753 Pili assembly chaperone PapD, C-terminal domain CVS48_02900 PF00577 Outer membrane usher protein CVS48_02900 PF13953 PapC C-terminal domain CVS48_02900 PF13954 PapC N-terminal domain CVS48_02910 PF00072 Response regulator receiver domain CVS48_02910 PF00196 Bacterial regulatory proteins, luxR family CVS48_02915 PF06551 CVS48_02915 CVS48_02920 PF06551 CVS48_02920 CVS48_02925 PF06551 CVS48_02925 CVS48_02935 PF04293 CVS48_02935 CVS48_02940 PF04285 CVS48_02940 CVS48_02945 PF06798 CVS48_02945 CVS48_02945 PF08298 PrkA AAA domain CVS48_02950 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CVS48_02950 PF01872 RibD C-terminal domain CVS48_02955 PF00857 Isochorismatase family CVS48_02960 PF01965 DJ-1/PfpI family CVS48_02960 PF12833 Helix-turn-helix domain CVS48_02965 PF03477 ATP cone domain CVS48_02970 PF00464 Serine hydroxymethyltransferase CVS48_02975 PF01161 Phosphatidylethanolamine-binding protein CVS48_02980 PF00579 tRNA synthetases class I (W and Y) CVS48_02980 PF01479 S4 domain CVS48_02985 PF01551 Peptidase family M23 CVS48_02990 PF03702 Uncharacterised protein family (UPF0075) CVS48_02995 PF01521 Iron-sulphur cluster biosynthesis CVS48_03005 PF01118 Semialdehyde dehydrogenase, NAD binding domain CVS48_03005 PF02774 Semialdehyde dehydrogenase, dimerisation domain CVS48_03010 PF00380 Ribosomal protein S9/S16 CVS48_03015 PF00572 Ribosomal protein L13 CVS48_03020 PF00005 ABC transporter CVS48_03025 PF00005 ABC transporter CVS48_03025 PF12399 Branched-chain amino acid ATP-binding cassette transporter CVS48_03030 PF02653 CVS48_03030 CVS48_03035 PF02653 CVS48_03035 CVS48_03040 PF13458 Periplasmic binding protein CVS48_03045 PF03480 Bacterial extracellular solute-binding protein, family 7 CVS48_03050 PF01523 Putative modulator of DNA gyrase CVS48_03055 PF04751 Protein of unknown function (DUF615) CVS48_03060 PF02230 Phospholipase/Carboxylesterase CVS48_03065 PF09084 NMT1/THI5 like CVS48_03070 PF00005 ABC transporter CVS48_03075 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_03080 PF00857 Isochorismatase family CVS48_03085 PF00583 Acetyltransferase (GNAT) family CVS48_03085 PF13549 ATP-grasp domain CVS48_03085 PF13607 Succinyl-CoA ligase like flavodoxin domain CVS48_03090 PF00749 tRNA synthetases class I (E and Q), catalytic domain CVS48_03095 PF07690 Major Facilitator Superfamily CVS48_03105 PF01037 AsnC family CVS48_03105 PF13412 Winged helix-turn-helix DNA-binding CVS48_03110 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CVS48_03115 PF00317 Ribonucleotide reductase, all-alpha domain CVS48_03115 PF02867 Ribonucleotide reductase, barrel domain CVS48_03115 PF03477 ATP cone domain CVS48_03120 PF00268 Ribonucleotide reductase, small chain CVS48_03125 PF07382 CVS48_03125 CVS48_03130 PF02325 CVS48_03130 CVS48_03135 PF00501 AMP-binding enzyme CVS48_03135 PF13193 AMP-binding enzyme C-terminal domain CVS48_03140 PF03062 CVS48_03140 CVS48_03150 PF04914 DltD C-terminal region CVS48_03155 PF00550 Phosphopantetheine attachment site CVS48_03160 PF05433 CVS48_03160 CVS48_03165 PF00294 pfkB family carbohydrate kinase CVS48_03170 PF11906 CVS48_03170 CVS48_03170 PF13719 CVS48_03170 CVS48_03175 PF06325 Ribosomal protein L11 methyltransferase (PrmA) CVS48_03180 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain CVS48_03180 PF02785 Biotin carboxylase C-terminal domain CVS48_03180 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CVS48_03185 PF00364 Biotin-requiring enzyme CVS48_03190 PF01220 Dehydroquinase class II CVS48_03195 PF08534 Redoxin CVS48_03200 PF01225 Mur ligase family, catalytic domain CVS48_03200 PF02875 Mur ligase family, glutamate ligase domain CVS48_03200 PF08245 Mur ligase middle domain CVS48_03205 PF05728 Uncharacterised protein family (UPF0227) CVS48_03210 PF00773 RNB domain CVS48_03215 PF00072 Response regulator receiver domain CVS48_03215 PF00486 Transcriptional regulatory protein, C terminal CVS48_03220 PF00512 His Kinase A (phospho-acceptor) domain CVS48_03220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_03220 PF08521 CVS48_03220 CVS48_03220 PF13531 Bacterial extracellular solute-binding protein CVS48_03225 PF13416 Bacterial extracellular solute-binding protein CVS48_03230 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_03235 PF00005 ABC transporter CVS48_03240 PF03544 Gram-negative bacterial TonB protein C-terminal CVS48_03245 PF01488 Shikimate / quinate 5-dehydrogenase CVS48_03245 PF08501 Shikimate dehydrogenase substrate binding domain CVS48_03250 PF00912 Transglycosylase CVS48_03255 PF03739 CVS48_03255 CVS48_03260 PF00149 Calcineurin-like phosphoesterase CVS48_03265 PF00872 CVS48_03265 CVS48_03270 PF00005 ABC transporter CVS48_03275 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_03280 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_03285 PF00497 Bacterial extracellular solute-binding proteins, family 3 CVS48_03290 PF00155 Aminotransferase class I and II CVS48_03295 PF03737 Demethylmenaquinone methyltransferase CVS48_03300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_03300 PF03466 LysR substrate binding domain CVS48_03305 PF01553 Acyltransferase CVS48_03325 PF03652 Uncharacterised protein family (UPF0081) CVS48_03330 PF02622 Uncharacterized ACR, COG1678 CVS48_03335 PF00301 Rubredoxin CVS48_03340 PF08543 Phosphomethylpyrimidine kinase CVS48_03345 PF02581 Thiamine monophosphate synthase/TENI CVS48_03350 PF00202 Aminotransferase class-III CVS48_03355 PF01464 Transglycosylase SLT domain CVS48_03360 PF03961 CVS48_03360 CVS48_03365 PF13561 Enoyl-(Acyl carrier protein) reductase CVS48_03370 PF00857 Isochorismatase family CVS48_03375 PF00866 Ring hydroxylating beta subunit CVS48_03380 PF00355 Rieske [2Fe-2S] domain CVS48_03380 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CVS48_03385 PF01738 Dienelactone hydrolase family CVS48_03390 PF13458 Periplasmic binding protein CVS48_03395 PF12833 Helix-turn-helix domain CVS48_03395 PF14525 CVS48_03395 CVS48_03400 PF01042 Endoribonuclease L-PSP CVS48_03405 PF13279 Thioesterase-like superfamily CVS48_03410 PF00501 AMP-binding enzyme CVS48_03410 PF13193 AMP-binding enzyme C-terminal domain CVS48_03415 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CVS48_03415 PF02770 Acyl-CoA dehydrogenase, middle domain CVS48_03415 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CVS48_03420 PF00378 Enoyl-CoA hydratase/isomerase family CVS48_03425 PF00106 short chain dehydrogenase CVS48_03430 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CVS48_03435 PF00563 EAL domain CVS48_03435 PF00990 GGDEF domain CVS48_03435 PF08447 PAS fold CVS48_03435 PF13185 GAF domain CVS48_03435 PF13426 PAS domain CVS48_03440 PF00990 GGDEF domain CVS48_03445 PF09345 CVS48_03445 CVS48_03455 PF00672 HAMP domain CVS48_03455 PF07228 Stage II sporulation protein E (SpoIIE) CVS48_03460 PF00005 ABC transporter CVS48_03465 PF00005 ABC transporter CVS48_03465 PF12399 Branched-chain amino acid ATP-binding cassette transporter CVS48_03470 PF02653 CVS48_03470 CVS48_03475 PF02653 CVS48_03475 CVS48_03480 PF13458 Periplasmic binding protein CVS48_03485 PF01047 MarR family CVS48_03495 PF01960 ArgJ family CVS48_03500 PF05673 Protein of unknown function (DUF815) CVS48_03505 PF00293 NUDIX domain CVS48_03505 PF02581 Thiamine monophosphate synthase/TENI CVS48_03515 PF00440 Bacterial regulatory proteins, tetR family CVS48_03520 PF07969 Amidohydrolase family CVS48_03525 PF01266 FAD dependent oxidoreductase CVS48_03530 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_03540 PF00873 AcrB/AcrD/AcrF family CVS48_03545 PF00873 AcrB/AcrD/AcrF family CVS48_03550 PF13437 HlyD family secretion protein CVS48_03550 PF13533 Biotin-lipoyl like CVS48_03555 PF07072 Protein of unknown function (DUF1342) CVS48_03560 PF01121 Dephospho-CoA kinase CVS48_03565 PF01478 Type IV leader peptidase family CVS48_03565 PF06750 CVS48_03565 CVS48_03570 PF04170 NlpE N-terminal domain CVS48_03575 PF00196 Bacterial regulatory proteins, luxR family CVS48_03580 PF02569 Pantoate-beta-alanine ligase CVS48_03585 PF02616 ScpA/B protein CVS48_03590 PF11943 CVS48_03590 CVS48_03595 PF07690 Major Facilitator Superfamily CVS48_03600 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CVS48_03600 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CVS48_03605 PF00872 CVS48_03605 CVS48_03610 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CVS48_03610 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CVS48_03615 PF00730 HhH-GPD superfamily base excision DNA repair protein CVS48_03615 PF14815 NUDIX domain CVS48_03620 PF13560 Helix-turn-helix domain CVS48_03625 PF08241 Methyltransferase domain CVS48_03630 PF01232 Mannitol dehydrogenase Rossmann domain CVS48_03630 PF08125 Mannitol dehydrogenase C-terminal domain CVS48_03635 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CVS48_03635 PF13378 Enolase C-terminal domain-like CVS48_03640 PF00005 ABC transporter CVS48_03645 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_03650 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_03655 PF00107 Zinc-binding dehydrogenase CVS48_03655 PF08240 Alcohol dehydrogenase GroES-like domain CVS48_03660 PF00497 Bacterial extracellular solute-binding proteins, family 3 CVS48_03665 PF00497 Bacterial extracellular solute-binding proteins, family 3 CVS48_03670 PF00392 Bacterial regulatory proteins, gntR family CVS48_03670 PF07729 FCD domain CVS48_03675 PF01425 Amidase CVS48_03680 PF00809 Pterin binding enzyme CVS48_03680 PF02310 B12 binding domain CVS48_03680 PF02574 Homocysteine S-methyltransferase CVS48_03680 PF02607 B12 binding domain CVS48_03680 PF02965 Vitamin B12 dependent methionine synthase, activation domain CVS48_03685 PF00593 TonB dependent receptor CVS48_03685 PF07715 TonB-dependent Receptor Plug Domain CVS48_03690 PF01497 Periplasmic binding protein CVS48_03695 PF05690 Thiazole biosynthesis protein ThiG CVS48_03700 PF08543 Phosphomethylpyrimidine kinase CVS48_03705 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) CVS48_03710 PF02321 Outer membrane efflux protein CVS48_03715 PF00665 Integrase core domain CVS48_03715 PF13518 Helix-turn-helix domain CVS48_03720 PF01467 Cytidylyltransferase CVS48_03730 PF03109 CVS48_03730 CVS48_03735 PF02036 SCP-2 sterol transfer family CVS48_03740 PF04280 Tim44-like domain CVS48_03745 PF01209 ubiE/COQ5 methyltransferase family CVS48_03750 PF00072 Response regulator receiver domain CVS48_03750 PF00486 Transcriptional regulatory protein, C terminal CVS48_03755 PF00512 His Kinase A (phospho-acceptor) domain CVS48_03755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_03755 PF11808 CVS48_03755 CVS48_03760 PF00072 Response regulator receiver domain CVS48_03760 PF00486 Transcriptional regulatory protein, C terminal CVS48_03765 PF00512 His Kinase A (phospho-acceptor) domain CVS48_03765 PF00672 HAMP domain CVS48_03765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_03770 PF00394 Multicopper oxidase CVS48_03770 PF07731 Multicopper oxidase CVS48_03770 PF07732 Multicopper oxidase CVS48_03775 PF05275 CVS48_03775 CVS48_03780 PF04214 CVS48_03780 CVS48_03785 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CVS48_03785 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CVS48_03790 PF00665 Integrase core domain CVS48_03790 PF13518 Helix-turn-helix domain CVS48_03795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_03795 PF03466 LysR substrate binding domain CVS48_03800 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CVS48_03805 PF02682 Allophanate hydrolase subunit 1 CVS48_03810 PF02626 Allophanate hydrolase subunit 2 CVS48_03815 PF00392 Bacterial regulatory proteins, gntR family CVS48_03815 PF07729 FCD domain CVS48_03820 PF03458 CVS48_03820 CVS48_03825 PF00582 Universal stress protein family CVS48_03830 PF07690 Major Facilitator Superfamily CVS48_03835 PF07021 Methionine biosynthesis protein MetW CVS48_03840 PF00561 alpha/beta hydrolase fold CVS48_03845 PF02615 Malate/L-lactate dehydrogenase CVS48_03850 PF03547 CVS48_03850 CVS48_03855 PF00196 Bacterial regulatory proteins, luxR family CVS48_03865 PF12146 Putative lysophospholipase CVS48_03870 PF04262 Glutamate-cysteine ligase CVS48_03875 PF08212 Lipocalin-like domain CVS48_03880 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family CVS48_03885 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_03890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_03890 PF03466 LysR substrate binding domain CVS48_03895 PF07859 alpha/beta hydrolase fold CVS48_03900 PF00392 Bacterial regulatory proteins, gntR family CVS48_03900 PF07729 FCD domain CVS48_03905 PF00005 ABC transporter CVS48_03910 PF00005 ABC transporter CVS48_03910 PF12399 Branched-chain amino acid ATP-binding cassette transporter CVS48_03915 PF02653 CVS48_03915 CVS48_03920 PF02653 CVS48_03920 CVS48_03925 PF13458 Periplasmic binding protein CVS48_03930 PF01557 Fumarylacetoacetate (FAA) hydrolase family CVS48_03935 PF07883 Cupin domain CVS48_03950 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CVS48_03955 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CVS48_03955 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CVS48_03960 PF02515 CoA-transferase family III CVS48_03965 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CVS48_03965 PF02770 Acyl-CoA dehydrogenase, middle domain CVS48_03965 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CVS48_03970 PF00440 Bacterial regulatory proteins, tetR family CVS48_03975 PF03060 Nitronate monooxygenase CVS48_03980 PF00378 Enoyl-CoA hydratase/isomerase family CVS48_03985 PF00378 Enoyl-CoA hydratase/isomerase family CVS48_03990 PF01256 Carbohydrate kinase CVS48_04000 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CVS48_04005 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family CVS48_04010 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_04015 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_04020 PF00005 ABC transporter CVS48_04020 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS48_04025 PF00005 ABC transporter CVS48_04025 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS48_04035 PF01546 Peptidase family M20/M25/M40 CVS48_04035 PF07687 Peptidase dimerisation domain CVS48_04040 PF14602 Hexapeptide repeat of succinyl-transferase CVS48_04040 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle CVS48_04050 PF13230 Glutamine amidotransferases class-II CVS48_04055 PF01212 Beta-eliminating lyase CVS48_04060 PF02311 AraC-like ligand binding domain CVS48_04060 PF12833 Helix-turn-helix domain CVS48_04065 PF00580 UvrD/REP helicase N-terminal domain CVS48_04065 PF13361 UvrD-like helicase C-terminal domain CVS48_04070 PF00270 DEAD/DEAH box helicase CVS48_04070 PF00271 Helicase conserved C-terminal domain CVS48_04075 PF01208 Uroporphyrinogen decarboxylase (URO-D) CVS48_04080 PF02954 Bacterial regulatory protein, Fis family CVS48_04085 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CVS48_04090 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CVS48_04090 PF02874 ATP synthase alpha/beta family, beta-barrel domain CVS48_04095 PF00231 ATP synthase CVS48_04100 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CVS48_04100 PF00306 ATP synthase alpha/beta chain, C terminal domain CVS48_04100 PF02874 ATP synthase alpha/beta family, beta-barrel domain CVS48_04105 PF00213 ATP synthase delta (OSCP) subunit CVS48_04110 PF00430 ATP synthase B/B' CF(0) CVS48_04115 PF00137 ATP synthase subunit C CVS48_04120 PF00119 ATP synthase A chain CVS48_04125 PF03899 CVS48_04125 CVS48_04130 PF06742 Protein of unknown function (DUF1214) CVS48_04130 PF06863 Protein of unknown function (DUF1254) CVS48_04135 PF00378 Enoyl-CoA hydratase/isomerase family CVS48_04140 PF05299 M61 glycyl aminopeptidase CVS48_04140 PF13180 PDZ domain CVS48_04145 PF00419 Fimbrial protein CVS48_04150 PF00577 Outer membrane usher protein CVS48_04150 PF13953 PapC C-terminal domain CVS48_04150 PF13954 PapC N-terminal domain CVS48_04155 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CVS48_04155 PF02753 Pili assembly chaperone PapD, C-terminal domain CVS48_04165 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_04170 PF01144 Coenzyme A transferase CVS48_04175 PF01144 Coenzyme A transferase CVS48_04180 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_04185 PF07992 Pyridine nucleotide-disulphide oxidoreductase CVS48_04190 PF02152 Dihydroneopterin aldolase CVS48_04195 PF01171 PP-loop family CVS48_04200 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CVS48_04200 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CVS48_04205 PF10411 Disulfide bond isomerase protein N-terminus CVS48_04205 PF13098 Thioredoxin-like domain CVS48_04210 PF01494 FAD binding domain CVS48_04215 PF03562 MltA specific insert domain CVS48_04215 PF06725 3D domain CVS48_04220 PF04379 Protein of unknown function (DUF525) CVS48_04225 PF00834 Ribulose-phosphate 3 epimerase family CVS48_04230 PF13419 Haloacid dehalogenase-like hydrolase CVS48_04235 PF00425 chorismate binding enzyme CVS48_04235 PF04715 Anthranilate synthase component I, N terminal region CVS48_04240 PF00117 Glutamine amidotransferase class-I CVS48_04245 PF00591 Glycosyl transferase family, a/b domain CVS48_04245 PF02885 Glycosyl transferase family, helical bundle domain CVS48_04250 PF00218 Indole-3-glycerol phosphate synthase CVS48_04255 PF00158 Sigma-54 interaction domain CVS48_04255 PF01590 GAF domain CVS48_04255 PF02954 Bacterial regulatory protein, Fis family CVS48_04260 PF00171 Aldehyde dehydrogenase family CVS48_04265 PF05610 CVS48_04265 CVS48_04270 PF01323 DSBA-like thioredoxin domain CVS48_04275 PF11142 CVS48_04275 CVS48_04280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_04280 PF03466 LysR substrate binding domain CVS48_04285 PF00586 AIR synthase related protein, N-terminal domain CVS48_04285 PF02769 AIR synthase related protein, C-terminal domain CVS48_04290 PF01841 Transglutaminase-like superfamily CVS48_04300 PF00009 Elongation factor Tu GTP binding domain CVS48_04300 PF09106 Elongation factor SelB, winged helix CVS48_04300 PF09107 Elongation factor SelB, winged helix CVS48_04305 PF03841 L-seryl-tRNA selenium transferase CVS48_04305 PF12390 CVS48_04305 CVS48_04310 PF04216 Protein involved in formate dehydrogenase formation CVS48_04315 PF01292 Prokaryotic cytochrome b561 CVS48_04320 PF09163 Formate dehydrogenase N, transmembrane CVS48_04320 PF13247 4Fe-4S dicluster domain CVS48_04325 PF00384 Molybdopterin oxidoreductase CVS48_04325 PF01568 Molydopterin dinucleotide binding domain CVS48_04330 PF00384 Molybdopterin oxidoreductase CVS48_04330 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CVS48_04335 PF06742 Protein of unknown function (DUF1214) CVS48_04335 PF06863 Protein of unknown function (DUF1254) CVS48_04340 PF03061 Thioesterase superfamily CVS48_04345 PF04116 CVS48_04345 CVS48_04350 PF01522 Polysaccharide deacetylase CVS48_04355 PF10282 Lactonase, 7-bladed beta-propeller CVS48_04360 PF11453 CVS48_04360 CVS48_04365 PF11737 CVS48_04365 CVS48_04370 PF00582 Universal stress protein family CVS48_04375 PF00111 2Fe-2S iron-sulfur cluster binding domain CVS48_04375 PF00175 Oxidoreductase NAD-binding domain CVS48_04375 PF00970 Oxidoreductase FAD-binding domain CVS48_04380 PF03928 Domain of unknown function (DUF336) CVS48_04385 PF00171 Aldehyde dehydrogenase family CVS48_04395 PF01925 CVS48_04395 CVS48_04400 PF00392 Bacterial regulatory proteins, gntR family CVS48_04400 PF07729 FCD domain CVS48_04405 PF00111 2Fe-2S iron-sulfur cluster binding domain CVS48_04415 PF00111 2Fe-2S iron-sulfur cluster binding domain CVS48_04420 PF14518 Iron-containing redox enzyme CVS48_04430 PF10990 CVS48_04430 CVS48_04435 PF10136 CVS48_04435 CVS48_04440 PF07690 Major Facilitator Superfamily CVS48_04445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CVS48_04445 PF02203 Tar ligand binding domain homologue CVS48_04450 PF01979 Amidohydrolase family CVS48_04455 PF00324 Amino acid permease CVS48_04460 PF00221 Aromatic amino acid lyase CVS48_04465 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CVS48_04470 PF01175 Urocanase CVS48_04470 PF17391 CVS48_04470 CVS48_04470 PF17392 CVS48_04470 CVS48_04475 PF05962 HutD CVS48_04480 PF00392 Bacterial regulatory proteins, gntR family CVS48_04480 PF07702 UTRA domain CVS48_04485 PF02583 Metal-sensitive transcriptional repressor CVS48_04490 PF00107 Zinc-binding dehydrogenase CVS48_04490 PF08240 Alcohol dehydrogenase GroES-like domain CVS48_04500 PF00534 Glycosyl transferases group 1 CVS48_04500 PF13439 Glycosyltransferase Family 4 CVS48_04510 PF00491 Arginase family CVS48_04515 PF00474 Sodium:solute symporter family CVS48_04520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_04520 PF03466 LysR substrate binding domain CVS48_04525 PF01926 50S ribosome-binding GTPase CVS48_04525 PF05128 CVS48_04525 CVS48_04530 PF00563 EAL domain CVS48_04530 PF00990 GGDEF domain CVS48_04530 PF08448 PAS fold CVS48_04530 PF13426 PAS domain CVS48_04535 PF06348 CVS48_04535 CVS48_04540 PF02423 Ornithine cyclodeaminase/mu-crystallin family CVS48_04545 PF01037 AsnC family CVS48_04545 PF13412 Winged helix-turn-helix DNA-binding CVS48_04550 PF14252 CVS48_04550 CVS48_04555 PF13437 HlyD family secretion protein CVS48_04555 PF13533 Biotin-lipoyl like CVS48_04560 PF13437 HlyD family secretion protein CVS48_04565 PF13437 HlyD family secretion protein CVS48_04570 PF02321 Outer membrane efflux protein CVS48_04575 PF00501 AMP-binding enzyme CVS48_04580 PF06532 CVS48_04580 CVS48_04585 PF04542 Sigma-70 region 2 CVS48_04585 PF08281 Sigma-70, region 4 CVS48_04590 PF00563 EAL domain CVS48_04595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_04595 PF03466 LysR substrate binding domain CVS48_04600 PF07690 Major Facilitator Superfamily CVS48_04605 PF14080 CVS48_04605 CVS48_04610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_04610 PF03466 LysR substrate binding domain CVS48_04615 PF00248 Aldo/keto reductase family CVS48_04620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_04620 PF03466 LysR substrate binding domain CVS48_04625 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_04630 PF01425 Amidase CVS48_04635 PF00384 Molybdopterin oxidoreductase CVS48_04635 PF01568 Molydopterin dinucleotide binding domain CVS48_04640 PF01564 Spermine/spermidine synthase CVS48_04645 PF00144 Beta-lactamase CVS48_04645 PF11954 CVS48_04645 CVS48_04655 PF00144 Beta-lactamase CVS48_04660 PF01590 GAF domain CVS48_04660 PF04397 LytTr DNA-binding domain CVS48_04665 PF02627 Carboxymuconolactone decarboxylase family CVS48_04670 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_04675 PF04199 Putative cyclase CVS48_04680 PF02515 CoA-transferase family III CVS48_04685 PF03328 HpcH/HpaI aldolase/citrate lyase family CVS48_04690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_04690 PF03466 LysR substrate binding domain CVS48_04695 PF00544 Pectate lyase CVS48_04715 PF01061 CVS48_04715 CVS48_04720 PF02563 Polysaccharide biosynthesis/export protein CVS48_04725 PF00534 Glycosyl transferases group 1 CVS48_04735 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CVS48_04735 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CVS48_04735 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CVS48_04740 PF00440 Bacterial regulatory proteins, tetR family CVS48_04755 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CVS48_04760 PF01042 Endoribonuclease L-PSP CVS48_04765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_04765 PF03466 LysR substrate binding domain CVS48_04770 PF12281 CVS48_04770 CVS48_04785 PF09723 CVS48_04785 CVS48_04790 PF03069 Acetamidase/Formamidase family CVS48_04795 PF00005 ABC transporter CVS48_04800 PF00005 ABC transporter CVS48_04800 PF12399 Branched-chain amino acid ATP-binding cassette transporter CVS48_04805 PF02653 CVS48_04805 CVS48_04810 PF02653 CVS48_04810 CVS48_04815 PF13433 Periplasmic binding protein domain CVS48_04820 PF00072 Response regulator receiver domain CVS48_04820 PF00512 His Kinase A (phospho-acceptor) domain CVS48_04820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_04825 PF00072 Response regulator receiver domain CVS48_04825 PF00196 Bacterial regulatory proteins, luxR family CVS48_04840 PF00580 UvrD/REP helicase N-terminal domain CVS48_04840 PF13361 UvrD-like helicase C-terminal domain CVS48_04850 PF13245 Part of AAA domain CVS48_04850 PF13538 UvrD-like helicase C-terminal domain CVS48_04860 PF13280 CVS48_04860 CVS48_04870 PF01380 SIS domain CVS48_04870 PF13522 Glutamine amidotransferase domain CVS48_04875 PF01037 AsnC family CVS48_04875 PF13412 Winged helix-turn-helix DNA-binding CVS48_04885 PF08843 Nucleotidyl transferase of unknown function (DUF1814) CVS48_04890 PF00534 Glycosyl transferases group 1 CVS48_04890 PF13439 Glycosyltransferase Family 4 CVS48_04895 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CVS48_04895 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CVS48_04895 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CVS48_04900 PF07690 Major Facilitator Superfamily CVS48_04905 PF00132 Bacterial transferase hexapeptide (six repeats) CVS48_04905 PF12804 MobA-like NTP transferase domain CVS48_04915 PF05433 CVS48_04915 CVS48_04920 PF12512 CVS48_04920 CVS48_04925 PF02630 SCO1/SenC CVS48_04930 PF01040 UbiA prenyltransferase family CVS48_04935 PF02628 CVS48_04935 CVS48_04945 PF02104 CVS48_04945 CVS48_04950 PF11137 CVS48_04950 CVS48_04960 PF00510 Cytochrome c oxidase subunit III CVS48_04965 PF11174 CVS48_04965 CVS48_04970 PF00115 Cytochrome C and Quinol oxidase polypeptide I CVS48_04975 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CVS48_04975 PF02790 Cytochrome C oxidase subunit II, transmembrane domain CVS48_04975 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CVS48_04980 PF00293 NUDIX domain CVS48_04980 PF15916 CVS48_04980 CVS48_04990 PF00149 Calcineurin-like phosphoesterase CVS48_04995 PF04542 Sigma-70 region 2 CVS48_04995 PF04545 Sigma-70, region 4 CVS48_05005 PF00756 Putative esterase CVS48_05015 PF00310 Glutamine amidotransferases class-II CVS48_05015 PF01493 GXGXG motif CVS48_05015 PF01645 Conserved region in glutamate synthase CVS48_05015 PF04898 Glutamate synthase central domain CVS48_05020 PF07992 Pyridine nucleotide-disulphide oxidoreductase CVS48_05020 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CVS48_05025 PF03922 OmpW family CVS48_05030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_05030 PF03466 LysR substrate binding domain CVS48_05035 PF06779 CVS48_05035 CVS48_05040 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_05045 PF03060 Nitronate monooxygenase CVS48_05050 PF00005 ABC transporter CVS48_05055 PF02405 CVS48_05055 CVS48_05060 PF02470 CVS48_05060 CVS48_05065 PF04333 CVS48_05065 CVS48_05070 PF05494 Toluene tolerance, Ttg2 CVS48_05075 PF00005 ABC transporter CVS48_05080 PF01061 CVS48_05080 CVS48_05085 PF01722 BolA-like protein CVS48_05090 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CVS48_05095 PF01634 ATP phosphoribosyltransferase CVS48_05100 PF00815 Histidinol dehydrogenase CVS48_05105 PF00155 Aminotransferase class I and II CVS48_05110 PF00475 Imidazoleglycerol-phosphate dehydratase CVS48_05115 PF00117 Glutamine amidotransferase class-I CVS48_05120 PF00977 Histidine biosynthesis protein CVS48_05125 PF00977 Histidine biosynthesis protein CVS48_05130 PF01502 Phosphoribosyl-AMP cyclohydrolase CVS48_05135 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CVS48_05140 PF01230 HIT domain CVS48_05145 PF02416 mttA/Hcf106 family CVS48_05150 PF02416 mttA/Hcf106 family CVS48_05155 PF00902 Sec-independent protein translocase protein (TatC) CVS48_05160 PF13560 Helix-turn-helix domain CVS48_05165 PF13180 PDZ domain CVS48_05165 PF13365 Trypsin-like peptidase domain CVS48_05170 PF01784 NIF3 (NGG1p interacting factor 3) CVS48_05175 PF01741 Large-conductance mechanosensitive channel, MscL CVS48_05180 PF00355 Rieske [2Fe-2S] domain CVS48_05185 PF00032 Cytochrome b(C-terminal)/b6/petD CVS48_05185 PF00033 Cytochrome b(N-terminal)/b6/petB CVS48_05190 PF02167 Cytochrome C1 family CVS48_05195 PF00043 Glutathione S-transferase, C-terminal domain CVS48_05195 PF13417 Glutathione S-transferase, N-terminal domain CVS48_05200 PF04386 Stringent starvation protein B CVS48_05205 PF04962 KduI/IolB family CVS48_05210 PF01261 Xylose isomerase-like TIM barrel CVS48_05215 PF00205 Thiamine pyrophosphate enzyme, central domain CVS48_05215 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CVS48_05215 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CVS48_05220 PF00294 pfkB family carbohydrate kinase CVS48_05220 PF09863 Uncharacterized protein conserved in bacteria (DUF2090) CVS48_05225 PF00005 ABC transporter CVS48_05230 PF02653 CVS48_05230 CVS48_05235 PF13407 Periplasmic binding protein domain CVS48_05240 PF01380 SIS domain CVS48_05240 PF01418 Helix-turn-helix domain, rpiR family CVS48_05245 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CVS48_05245 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CVS48_05250 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CVS48_05250 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CVS48_05270 PF02447 CVS48_05270 CVS48_05275 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_05280 PF01425 Amidase CVS48_05285 PF01614 Bacterial transcriptional regulator CVS48_05285 PF09339 IclR helix-turn-helix domain CVS48_05295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_05295 PF03466 LysR substrate binding domain CVS48_05300 PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease CVS48_05305 PF00266 Aminotransferase class-V CVS48_05310 PF00892 EamA-like transporter family CVS48_05315 PF12833 Helix-turn-helix domain CVS48_05320 PF11067 CVS48_05320 CVS48_05325 PF01926 50S ribosome-binding GTPase CVS48_05325 PF11981 CVS48_05325 CVS48_05330 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CVS48_05335 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_05340 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_05340 PF12911 CVS48_05340 CVS48_05345 PF00005 ABC transporter CVS48_05345 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS48_05350 PF06097 CVS48_05350 CVS48_05355 PF06097 CVS48_05355 CVS48_05360 PF00270 DEAD/DEAH box helicase CVS48_05360 PF00271 Helicase conserved C-terminal domain CVS48_05365 PF01810 CVS48_05365 CVS48_05370 PF00009 Elongation factor Tu GTP binding domain CVS48_05370 PF03144 Elongation factor Tu domain 2 CVS48_05370 PF16658 CVS48_05370 CVS48_05380 PF00210 Ferritin-like domain CVS48_05385 PF04324 BFD-like [2Fe-2S] binding domain CVS48_05390 PF00309 CVS48_05390 CVS48_05390 PF04552 Sigma-54, DNA binding domain CVS48_05390 PF04963 Sigma-54 factor, core binding domain CVS48_05400 PF00682 HMGL-like CVS48_05400 PF08502 LeuA allosteric (dimerisation) domain CVS48_05405 PF01425 Amidase CVS48_05410 PF00356 Bacterial regulatory proteins, lacI family CVS48_05410 PF13377 Periplasmic binding protein-like domain CVS48_05415 PF00149 Calcineurin-like phosphoesterase CVS48_05420 PF00005 ABC transporter CVS48_05420 PF08402 TOBE domain CVS48_05425 PF13416 Bacterial extracellular solute-binding protein CVS48_05430 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_05435 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_05445 PF08895 CVS48_05445 CVS48_05450 PF00750 tRNA synthetases class I (R) CVS48_05450 PF03485 Arginyl tRNA synthetase N terminal domain CVS48_05450 PF05746 DALR anticodon binding domain CVS48_05455 PF05036 Sporulation related domain CVS48_05460 PF01323 DSBA-like thioredoxin domain CVS48_05465 PF13458 Periplasmic binding protein CVS48_05475 PF01053 Cys/Met metabolism PLP-dependent enzyme CVS48_05480 PF00881 Nitroreductase family CVS48_05485 PF01810 CVS48_05485 CVS48_05490 PF00753 Metallo-beta-lactamase superfamily CVS48_05495 PF13411 MerR HTH family regulatory protein CVS48_05505 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CVS48_05505 PF02770 Acyl-CoA dehydrogenase, middle domain CVS48_05505 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CVS48_05510 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) CVS48_05515 PF00108 Thiolase, N-terminal domain CVS48_05515 PF02803 Thiolase, C-terminal domain CVS48_05520 PF01039 Carboxyl transferase domain CVS48_05525 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain CVS48_05525 PF00364 Biotin-requiring enzyme CVS48_05525 PF02785 Biotin carboxylase C-terminal domain CVS48_05525 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CVS48_05530 PF13417 Glutathione S-transferase, N-terminal domain CVS48_05535 PF01965 DJ-1/PfpI family CVS48_05540 PF00005 ABC transporter CVS48_05550 PF01970 CVS48_05550 CVS48_05555 PF07331 CVS48_05555 CVS48_05560 PF00512 His Kinase A (phospho-acceptor) domain CVS48_05560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_05565 PF00072 Response regulator receiver domain CVS48_05565 PF00158 Sigma-54 interaction domain CVS48_05565 PF02954 Bacterial regulatory protein, Fis family CVS48_05570 PF01339 CheB methylesterase CVS48_05570 PF01739 CheR methyltransferase, SAM binding domain CVS48_05570 PF03705 CheR methyltransferase, all-alpha domain CVS48_05570 PF13596 PAS domain CVS48_05575 PF01037 AsnC family CVS48_05575 PF13404 AsnC-type helix-turn-helix domain CVS48_05580 PF01810 CVS48_05580 CVS48_05585 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CVS48_05590 PF12833 Helix-turn-helix domain CVS48_05595 PF00924 Mechanosensitive ion channel CVS48_05600 PF00107 Zinc-binding dehydrogenase CVS48_05600 PF08240 Alcohol dehydrogenase GroES-like domain CVS48_05605 PF02627 Carboxymuconolactone decarboxylase family CVS48_05610 PF00171 Aldehyde dehydrogenase family CVS48_05615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_05615 PF03466 LysR substrate binding domain CVS48_05620 PF04266 ASCH domain CVS48_05630 PF00106 short chain dehydrogenase CVS48_05635 PF06719 CVS48_05635 CVS48_05635 PF12833 Helix-turn-helix domain CVS48_05645 PF13023 HD domain CVS48_05650 PF02661 Fic/DOC family CVS48_05655 PF13560 Helix-turn-helix domain CVS48_05660 PF00202 Aminotransferase class-III CVS48_05665 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_05670 PF07690 Major Facilitator Superfamily CVS48_05675 PF00497 Bacterial extracellular solute-binding proteins, family 3 CVS48_05680 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_05685 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_05690 PF00005 ABC transporter CVS48_05695 PF01168 Alanine racemase, N-terminal domain CVS48_05695 PF14031 Putative serine dehydratase domain CVS48_05700 PF16868 CVS48_05700 CVS48_05705 PF06808 CVS48_05705 CVS48_05710 PF04361 CVS48_05710 CVS48_05715 PF00749 tRNA synthetases class I (E and Q), catalytic domain CVS48_05720 PF09925 CVS48_05720 CVS48_05720 PF14345 CVS48_05720 CVS48_05720 PF14351 CVS48_05720 CVS48_05725 PF01131 DNA topoisomerase CVS48_05725 PF01751 Toprim domain CVS48_05725 PF13342 CVS48_05725 CVS48_05730 PF09084 NMT1/THI5 like CVS48_05735 PF00005 ABC transporter CVS48_05740 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_05745 PF13561 Enoyl-(Acyl carrier protein) reductase CVS48_05750 PF00205 Thiamine pyrophosphate enzyme, central domain CVS48_05750 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CVS48_05750 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CVS48_05755 PF01037 AsnC family CVS48_05755 PF13404 AsnC-type helix-turn-helix domain CVS48_05760 PF01062 CVS48_05760 CVS48_05765 PF00856 SET domain CVS48_05770 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CVS48_05780 PF00440 Bacterial regulatory proteins, tetR family CVS48_05785 PF05014 Nucleoside 2-deoxyribosyltransferase CVS48_05790 PF01613 Flavin reductase like domain CVS48_05795 PF13460 NADH(P)-binding CVS48_05800 PF02558 Ketopantoate reductase PanE/ApbA CVS48_05800 PF08546 Ketopantoate reductase PanE/ApbA C terminal CVS48_05805 PF00581 Rhodanese-like domain CVS48_05805 PF09335 CVS48_05805 CVS48_05810 PF02608 Basic membrane protein CVS48_05815 PF00005 ABC transporter CVS48_05820 PF02653 CVS48_05820 CVS48_05825 PF02653 CVS48_05825 CVS48_05830 PF03841 L-seryl-tRNA selenium transferase CVS48_05830 PF07969 Amidohydrolase family CVS48_05835 PF01042 Endoribonuclease L-PSP CVS48_05840 PF01266 FAD dependent oxidoreductase CVS48_05845 PF04324 BFD-like [2Fe-2S] binding domain CVS48_05845 PF07992 Pyridine nucleotide-disulphide oxidoreductase CVS48_05850 PF13510 2Fe-2S iron-sulfur cluster binding domain CVS48_05855 PF01266 FAD dependent oxidoreductase CVS48_05860 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_05865 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_05870 PF00005 ABC transporter CVS48_05870 PF08402 TOBE domain CVS48_05875 PF13416 Bacterial extracellular solute-binding protein CVS48_05880 PF00392 Bacterial regulatory proteins, gntR family CVS48_05880 PF07702 UTRA domain CVS48_05885 PF02538 CVS48_05885 CVS48_05890 PF01968 Hydantoinase/oxoprolinase CVS48_05890 PF05378 CVS48_05890 CVS48_05895 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_05900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_05900 PF03466 LysR substrate binding domain CVS48_05905 PF06445 GyrI-like small molecule binding domain CVS48_05905 PF12833 Helix-turn-helix domain CVS48_05910 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CVS48_05915 PF13416 Bacterial extracellular solute-binding protein CVS48_05920 PF01266 FAD dependent oxidoreductase CVS48_05925 PF04324 BFD-like [2Fe-2S] binding domain CVS48_05925 PF07992 Pyridine nucleotide-disulphide oxidoreductase CVS48_05930 PF13510 2Fe-2S iron-sulfur cluster binding domain CVS48_05935 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_05940 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_05945 PF00005 ABC transporter CVS48_05945 PF08402 TOBE domain CVS48_05950 PF01614 Bacterial transcriptional regulator CVS48_05950 PF09339 IclR helix-turn-helix domain CVS48_05955 PF01070 FMN-dependent dehydrogenase CVS48_05960 PF05721 Phytanoyl-CoA dioxygenase (PhyH) CVS48_05965 PF00708 Acylphosphatase CVS48_05970 PF00892 EamA-like transporter family CVS48_05975 PF01212 Beta-eliminating lyase CVS48_05980 PF00005 ABC transporter CVS48_05985 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_05990 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_05995 PF00497 Bacterial extracellular solute-binding proteins, family 3 CVS48_06000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_06000 PF03466 LysR substrate binding domain CVS48_06010 PF13310 CVS48_06010 CVS48_06020 PF14903 CVS48_06020 CVS48_06025 PF00204 DNA gyrase B CVS48_06025 PF00986 DNA gyrase B subunit, carboxyl terminus CVS48_06025 PF01751 Toprim domain CVS48_06025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_06030 PF00712 DNA polymerase III beta subunit, N-terminal domain CVS48_06030 PF02767 DNA polymerase III beta subunit, central domain CVS48_06030 PF02768 DNA polymerase III beta subunit, C-terminal domain CVS48_06035 PF00308 Bacterial dnaA protein CVS48_06035 PF08299 Bacterial dnaA protein helix-turn-helix CVS48_06035 PF11638 DnaA N-terminal domain CVS48_06040 PF00468 Ribosomal protein L34 CVS48_06045 PF00825 Ribonuclease P CVS48_06050 PF01809 CVS48_06050 CVS48_06055 PF02096 60Kd inner membrane protein CVS48_06055 PF14849 YidC periplasmic domain CVS48_06060 PF00199 Catalase CVS48_06060 PF06628 Catalase-related immune-responsive CVS48_06065 PF01546 Peptidase family M20/M25/M40 CVS48_06065 PF07687 Peptidase dimerisation domain CVS48_06070 PF00005 ABC transporter CVS48_06070 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS48_06075 PF00005 ABC transporter CVS48_06075 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS48_06080 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_06080 PF12911 CVS48_06080 CVS48_06085 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_06090 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CVS48_06095 PF01926 50S ribosome-binding GTPase CVS48_06095 PF10396 GTP-binding protein TrmE N-terminus CVS48_06095 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE CVS48_06100 PF00583 Acetyltransferase (GNAT) family CVS48_06105 PF00654 Voltage gated chloride channel CVS48_06110 PF00072 Response regulator receiver domain CVS48_06110 PF00486 Transcriptional regulatory protein, C terminal CVS48_06115 PF00512 His Kinase A (phospho-acceptor) domain CVS48_06115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_06115 PF08521 CVS48_06115 CVS48_06120 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_06125 PF07331 CVS48_06125 CVS48_06130 PF01970 CVS48_06130 CVS48_06135 PF00155 Aminotransferase class I and II CVS48_06140 PF05145 CVS48_06140 CVS48_06145 PF00313 'Cold-shock' DNA-binding domain CVS48_06150 PF01134 Glucose inhibited division protein A CVS48_06150 PF13932 GidA associated domain 3 CVS48_06155 PF02527 rRNA small subunit methyltransferase G CVS48_06160 PF13614 AAA domain CVS48_06165 PF00583 Acetyltransferase (GNAT) family CVS48_06170 PF02195 ParB-like nuclease domain CVS48_06175 PF00710 Asparaginase CVS48_06180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_06180 PF03466 LysR substrate binding domain CVS48_06195 PF00581 Rhodanese-like domain CVS48_06200 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_06205 PF00120 Glutamine synthetase, catalytic domain CVS48_06210 PF00171 Aldehyde dehydrogenase family CVS48_06215 PF00465 Iron-containing alcohol dehydrogenase CVS48_06235 PF00009 Elongation factor Tu GTP binding domain CVS48_06235 PF03143 Elongation factor Tu C-terminal domain CVS48_06235 PF03144 Elongation factor Tu domain 2 CVS48_06245 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CVS48_06250 PF00467 KOW motif CVS48_06250 PF02357 Transcription termination factor nusG CVS48_06255 PF00298 Ribosomal protein L11, RNA binding domain CVS48_06255 PF03946 Ribosomal protein L11, N-terminal domain CVS48_06260 PF00687 Ribosomal protein L1p/L10e family CVS48_06265 PF00466 Ribosomal protein L10 CVS48_06270 PF00542 Ribosomal protein L7/L12 C-terminal domain CVS48_06270 PF16320 CVS48_06270 CVS48_06275 PF00562 RNA polymerase Rpb2, domain 6 CVS48_06275 PF04560 RNA polymerase Rpb2, domain 7 CVS48_06275 PF04561 RNA polymerase Rpb2, domain 2 CVS48_06275 PF04563 RNA polymerase beta subunit CVS48_06275 PF04565 RNA polymerase Rpb2, domain 3 CVS48_06275 PF10385 RNA polymerase beta subunit external 1 domain CVS48_06280 PF00623 RNA polymerase Rpb1, domain 2 CVS48_06280 PF04983 RNA polymerase Rpb1, domain 3 CVS48_06280 PF04997 RNA polymerase Rpb1, domain 1 CVS48_06280 PF04998 RNA polymerase Rpb1, domain 5 CVS48_06280 PF05000 RNA polymerase Rpb1, domain 4 CVS48_06305 PF01476 LysM domain CVS48_06305 PF04773 FecR protein CVS48_06310 PF00072 Response regulator receiver domain CVS48_06310 PF00486 Transcriptional regulatory protein, C terminal CVS48_06315 PF00072 Response regulator receiver domain CVS48_06315 PF00486 Transcriptional regulatory protein, C terminal CVS48_06320 PF00164 Ribosomal protein S12/S23 CVS48_06325 PF00177 Ribosomal protein S7p/S5e CVS48_06330 PF00009 Elongation factor Tu GTP binding domain CVS48_06330 PF00679 Elongation factor G C-terminus CVS48_06330 PF03144 Elongation factor Tu domain 2 CVS48_06330 PF03764 Elongation factor G, domain IV CVS48_06330 PF14492 Elongation Factor G, domain II CVS48_06335 PF00009 Elongation factor Tu GTP binding domain CVS48_06335 PF03143 Elongation factor Tu C-terminal domain CVS48_06335 PF03144 Elongation factor Tu domain 2 CVS48_06340 PF00338 Ribosomal protein S10p/S20e CVS48_06345 PF01958 Domain of unknown function DUF108 CVS48_06345 PF03447 Homoserine dehydrogenase, NAD binding domain CVS48_06350 PF01614 Bacterial transcriptional regulator CVS48_06350 PF09339 IclR helix-turn-helix domain CVS48_06355 PF12697 Alpha/beta hydrolase family CVS48_06360 PF13609 Gram-negative porin CVS48_06365 PF07883 Cupin domain CVS48_06370 PF09084 NMT1/THI5 like CVS48_06375 PF00005 ABC transporter CVS48_06380 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_06385 PF00297 Ribosomal protein L3 CVS48_06390 PF00573 Ribosomal protein L4/L1 family CVS48_06395 PF00276 Ribosomal protein L23 CVS48_06400 PF00181 Ribosomal Proteins L2, RNA binding domain CVS48_06400 PF03947 Ribosomal Proteins L2, C-terminal domain CVS48_06405 PF00203 Ribosomal protein S19 CVS48_06410 PF00237 Ribosomal protein L22p/L17e CVS48_06415 PF00189 Ribosomal protein S3, C-terminal domain CVS48_06415 PF07650 KH domain CVS48_06420 PF00252 Ribosomal protein L16p/L10e CVS48_06425 PF00831 Ribosomal L29 protein CVS48_06430 PF00366 Ribosomal protein S17 CVS48_06445 PF02653 CVS48_06445 CVS48_06450 PF02653 CVS48_06450 CVS48_06455 PF00005 ABC transporter CVS48_06460 PF00005 ABC transporter CVS48_06465 PF13458 Periplasmic binding protein CVS48_06470 PF00561 alpha/beta hydrolase fold CVS48_06475 PF12833 Helix-turn-helix domain CVS48_06475 PF14525 CVS48_06475 CVS48_06480 PF00171 Aldehyde dehydrogenase family CVS48_06485 PF05118 Aspartyl/Asparaginyl beta-hydroxylase CVS48_06490 PF00238 Ribosomal protein L14p/L23e CVS48_06495 PF17136 CVS48_06495 CVS48_06500 PF00281 Ribosomal protein L5 CVS48_06500 PF00673 ribosomal L5P family C-terminus CVS48_06505 PF00253 Ribosomal protein S14p/S29e CVS48_06510 PF00410 Ribosomal protein S8 CVS48_06515 PF00347 Ribosomal protein L6 CVS48_06520 PF00861 Ribosomal L18p/L5e family CVS48_06525 PF00333 Ribosomal protein S5, N-terminal domain CVS48_06525 PF03719 Ribosomal protein S5, C-terminal domain CVS48_06530 PF00327 Ribosomal protein L30p/L7e CVS48_06535 PF00828 Ribosomal protein L18e/L15 CVS48_06540 PF00344 SecY translocase CVS48_06545 PF01176 Translation initiation factor 1A / IF-1 CVS48_06550 PF00444 Ribosomal protein L36 CVS48_06555 PF00416 Ribosomal protein S13/S18 CVS48_06560 PF00411 Ribosomal protein S11 CVS48_06565 PF00163 Ribosomal protein S4/S9 N-terminal domain CVS48_06565 PF01479 S4 domain CVS48_06570 PF01000 RNA polymerase Rpb3/RpoA insert domain CVS48_06570 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CVS48_06570 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CVS48_06575 PF01196 Ribosomal protein L17 CVS48_06580 PF01230 HIT domain CVS48_06585 PF03091 CutA1 divalent ion tolerance protein CVS48_06590 PF02683 CVS48_06590 CVS48_06590 PF11412 Disulphide bond corrector protein DsbC CVS48_06590 PF13899 Thioredoxin-like CVS48_06595 PF00892 EamA-like transporter family CVS48_06600 PF00490 Delta-aminolevulinic acid dehydratase CVS48_06605 PF01926 50S ribosome-binding GTPase CVS48_06610 PF00034 Cytochrome c CVS48_06615 PF05140 CVS48_06615 CVS48_06620 PF01578 CVS48_06620 CVS48_06625 PF13665 CVS48_06625 CVS48_06630 PF00805 Pentapeptide repeats (8 copies) CVS48_06630 PF13599 Pentapeptide repeats (9 copies) CVS48_06635 PF00805 Pentapeptide repeats (8 copies) CVS48_06635 PF09937 CVS48_06635 CVS48_06635 PF13599 Pentapeptide repeats (9 copies) CVS48_06645 PF05954 Phage late control gene D protein (GPD) CVS48_06645 PF10106 CVS48_06645 CVS48_06650 PF06812 CVS48_06650 CVS48_06655 PF05591 CVS48_06655 CVS48_06660 PF05943 CVS48_06660 CVS48_06665 PF05638 Protein of unknown function (DUF796) CVS48_06670 PF07024 ImpE protein CVS48_06675 PF04965 Gene 25-like lysozyme CVS48_06680 PF05947 CVS48_06680 CVS48_06685 PF12059 CVS48_06685 CVS48_06690 PF06996 CVS48_06690 CVS48_06695 PF00004 ATPase family associated with various cellular activities (AAA) CVS48_06695 PF07724 AAA domain (Cdc48 subfamily) CVS48_06695 PF10431 C-terminal, D2-small domain, of ClpB protein CVS48_06700 PF00498 FHA domain CVS48_06710 PF12790 Type VI secretion lipoprotein CVS48_06715 PF05936 CVS48_06715 CVS48_06720 PF00691 OmpA family CVS48_06720 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) CVS48_06725 PF06744 CVS48_06725 CVS48_06725 PF06761 CVS48_06725 CVS48_06725 PF14331 CVS48_06725 CVS48_06730 PF09867 Uncharacterized protein conserved in bacteria (DUF2094) CVS48_06740 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CVS48_06740 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CVS48_06745 PF13627 CVS48_06745 CVS48_06750 PF01491 Frataxin-like domain CVS48_06755 PF00905 Penicillin binding protein transpeptidase domain CVS48_06755 PF00912 Transglycosylase CVS48_06755 PF17092 CVS48_06755 CVS48_06760 PF01202 Shikimate kinase CVS48_06765 PF01761 3-dehydroquinate synthase CVS48_06770 PF01966 HD domain CVS48_06770 PF13286 Phosphohydrolase-associated domain CVS48_06775 PF13417 Glutathione S-transferase, N-terminal domain CVS48_06785 PF07690 Major Facilitator Superfamily CVS48_06790 PF00436 Single-strand binding protein family CVS48_06795 PF05860 haemagglutination activity domain CVS48_06795 PF07581 CVS48_06795 CVS48_06800 PF05860 haemagglutination activity domain CVS48_06800 PF07581 CVS48_06800 CVS48_06805 PF05860 haemagglutination activity domain CVS48_06805 PF07581 CVS48_06805 CVS48_06810 PF05860 haemagglutination activity domain CVS48_06810 PF07581 CVS48_06810 CVS48_06815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_06815 PF03466 LysR substrate binding domain CVS48_06820 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CVS48_06820 PF13378 Enolase C-terminal domain-like CVS48_06825 PF00593 TonB dependent receptor CVS48_06825 PF07715 TonB-dependent Receptor Plug Domain CVS48_06830 PF12833 Helix-turn-helix domain CVS48_06835 PF08241 Methyltransferase domain CVS48_06840 PF13663 CVS48_06840 CVS48_06845 PF13663 CVS48_06845 CVS48_06850 PF00440 Bacterial regulatory proteins, tetR family CVS48_06860 PF00440 Bacterial regulatory proteins, tetR family CVS48_06860 PF13977 Bacterial transcriptional repressor CVS48_06865 PF01274 Malate synthase CVS48_06870 PF00392 Bacterial regulatory proteins, gntR family CVS48_06870 PF07729 FCD domain CVS48_06875 PF03435 Saccharopine dehydrogenase CVS48_06875 PF16653 CVS48_06875 CVS48_06880 PF13663 CVS48_06880 CVS48_06885 PF06476 CVS48_06885 CVS48_06890 PF01040 UbiA prenyltransferase family CVS48_06895 PF00155 Aminotransferase class I and II CVS48_06900 PF13185 GAF domain CVS48_06905 PF00701 Dihydrodipicolinate synthetase family CVS48_06910 PF04116 CVS48_06910 CVS48_06915 PF00487 CVS48_06915 CVS48_06920 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CVS48_06920 PF14518 Iron-containing redox enzyme CVS48_06930 PF07399 CVS48_06930 CVS48_06935 PF09723 CVS48_06935 CVS48_06940 PF04367 CVS48_06940 CVS48_06945 PF00152 tRNA synthetases class II (D, K and N) CVS48_06945 PF01336 OB-fold nucleic acid binding domain CVS48_06945 PF02938 GAD domain CVS48_06950 PF03372 Endonuclease/Exonuclease/phosphatase family CVS48_06955 PF13091 PLD-like domain CVS48_06960 PF00892 EamA-like transporter family CVS48_06965 PF07690 Major Facilitator Superfamily CVS48_06970 PF06240 Carbon monoxide dehydrogenase subunit G (CoxG) CVS48_06975 PF16363 CVS48_06975 CVS48_06980 PF04321 RmlD substrate binding domain CVS48_06985 PF00483 Nucleotidyl transferase CVS48_06990 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CVS48_06995 PF00953 Glycosyl transferase family 4 CVS48_07000 PF01370 NAD dependent epimerase/dehydratase family CVS48_07005 PF00535 Glycosyl transferase family 2 CVS48_07010 PF00535 Glycosyl transferase family 2 CVS48_07030 PF00005 ABC transporter CVS48_07035 PF01061 CVS48_07035 CVS48_07045 PF00202 Aminotransferase class-III CVS48_07050 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CVS48_07055 PF02348 Cytidylyltransferase CVS48_07060 PF03102 NeuB family CVS48_07060 PF08666 SAF domain CVS48_07065 PF00483 Nucleotidyl transferase CVS48_07065 PF00571 CBS domain CVS48_07070 PF00132 Bacterial transferase hexapeptide (six repeats) CVS48_07070 PF14602 Hexapeptide repeat of succinyl-transferase CVS48_07075 PF03102 NeuB family CVS48_07080 PF02350 UDP-N-acetylglucosamine 2-epimerase CVS48_07085 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CVS48_07090 PF16363 CVS48_07090 CVS48_07095 PF02719 Polysaccharide biosynthesis protein CVS48_07095 PF13727 CoA-binding domain CVS48_07105 PF10997 CVS48_07105 CVS48_07110 PF00534 Glycosyl transferases group 1 CVS48_07110 PF13477 Glycosyl transferase 4-like CVS48_07115 PF02397 CVS48_07115 CVS48_07120 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CVS48_07125 PF13579 Glycosyl transferase 4-like domain CVS48_07125 PF13692 Glycosyl transferases group 1 CVS48_07130 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CVS48_07135 PF00132 Bacterial transferase hexapeptide (six repeats) CVS48_07140 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CVS48_07140 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CVS48_07145 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CVS48_07150 PF00534 Glycosyl transferases group 1 CVS48_07150 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CVS48_07160 PF03309 Type III pantothenate kinase CVS48_07165 PF02237 Biotin protein ligase C terminal domain CVS48_07165 PF03099 Biotin/lipoate A/B protein ligase family CVS48_07170 PF02405 CVS48_07170 CVS48_07175 PF00005 ABC transporter CVS48_07180 PF02470 CVS48_07180 CVS48_07185 PF03886 Protein of unknown function (DUF330) CVS48_07195 PF00768 D-alanyl-D-alanine carboxypeptidase CVS48_07195 PF07943 Penicillin-binding protein 5, C-terminal domain CVS48_07200 PF01063 Aminotransferase class IV CVS48_07205 PF04359 Protein of unknown function (DUF493) CVS48_07210 PF03099 Biotin/lipoate A/B protein ligase family CVS48_07215 PF08238 Sel1 repeat CVS48_07220 PF13377 Periplasmic binding protein-like domain CVS48_07225 PF04055 Radical SAM superfamily CVS48_07225 PF16881 CVS48_07225 CVS48_07230 PF01923 Cobalamin adenosyltransferase CVS48_07235 PF11604 Copper binding periplasmic protein CusF CVS48_07240 PF00004 ATPase family associated with various cellular activities (AAA) CVS48_07240 PF07724 AAA domain (Cdc48 subfamily) CVS48_07240 PF10431 C-terminal, D2-small domain, of ClpB protein CVS48_07245 PF00227 Proteasome subunit CVS48_07250 PF01258 Prokaryotic dksA/traR C4-type zinc finger CVS48_07255 PF02492 CobW/HypB/UreG, nucleotide-binding domain CVS48_07255 PF07683 Cobalamin synthesis protein cobW C-terminal domain CVS48_07260 PF01475 Ferric uptake regulator family CVS48_07265 PF00005 ABC transporter CVS48_07270 PF00950 CVS48_07270 CVS48_07275 PF01297 Periplasmic solute binding protein family CVS48_07280 PF06226 CVS48_07280 CVS48_07285 PF03824 CVS48_07285 CVS48_07290 PF00589 Phage integrase family CVS48_07290 PF02899 Phage integrase, N-terminal SAM-like domain CVS48_07295 PF04340 Protein of unknown function, DUF484 CVS48_07300 PF01678 Diaminopimelate epimerase CVS48_07305 PF03279 CVS48_07305 CVS48_07310 PF03279 CVS48_07310 CVS48_07315 PF00438 S-adenosylmethionine synthetase, N-terminal domain CVS48_07315 PF02772 S-adenosylmethionine synthetase, central domain CVS48_07315 PF02773 S-adenosylmethionine synthetase, C-terminal domain CVS48_07320 PF01425 Amidase CVS48_07325 PF07690 Major Facilitator Superfamily CVS48_07330 PF01037 AsnC family CVS48_07330 PF09339 IclR helix-turn-helix domain CVS48_07330 PF13404 AsnC-type helix-turn-helix domain CVS48_07335 PF00005 ABC transporter CVS48_07335 PF02653 CVS48_07335 CVS48_07335 PF12399 Branched-chain amino acid ATP-binding cassette transporter CVS48_07340 PF02653 CVS48_07340 CVS48_07345 PF13458 Periplasmic binding protein CVS48_07350 PF01522 Polysaccharide deacetylase CVS48_07355 PF00392 Bacterial regulatory proteins, gntR family CVS48_07355 PF07729 FCD domain CVS48_07360 PF01613 Flavin reductase like domain CVS48_07365 PF07804 HipA-like C-terminal domain CVS48_07365 PF13657 HipA N-terminal domain CVS48_07370 PF13560 Helix-turn-helix domain CVS48_07375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_07375 PF03466 LysR substrate binding domain CVS48_07380 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_07385 PF00330 Aconitase family (aconitate hydratase) CVS48_07390 PF00694 Aconitase C-terminal domain CVS48_07395 PF00561 alpha/beta hydrolase fold CVS48_07400 PF06945 CVS48_07400 CVS48_07405 PF00534 Glycosyl transferases group 1 CVS48_07405 PF13439 Glycosyltransferase Family 4 CVS48_07410 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CVS48_07410 PF05221 S-adenosyl-L-homocysteine hydrolase CVS48_07415 PF04020 CVS48_07415 CVS48_07420 PF02219 Methylenetetrahydrofolate reductase CVS48_07425 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_07430 PF00227 Proteasome subunit CVS48_07435 PF01841 Transglutaminase-like superfamily CVS48_07435 PF08379 CVS48_07435 CVS48_07440 PF04168 CVS48_07440 CVS48_07445 PF14403 CVS48_07445 CVS48_07450 PF01812 5-formyltetrahydrofolate cyclo-ligase family CVS48_07455 PF01464 Transglycosylase SLT domain CVS48_07455 PF14718 Soluble lytic murein transglycosylase L domain CVS48_07460 PF01743 Poly A polymerase head domain CVS48_07460 PF12627 Probable RNA and SrmB- binding site of polymerase A CVS48_07465 PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase CVS48_07470 PF00270 DEAD/DEAH box helicase CVS48_07470 PF00271 Helicase conserved C-terminal domain CVS48_07475 PF03167 Uracil DNA glycosylase superfamily CVS48_07480 PF06965 Na+/H+ antiporter 1 CVS48_07490 PF00534 Glycosyl transferases group 1 CVS48_07490 PF13439 Glycosyltransferase Family 4 CVS48_07495 PF01230 HIT domain CVS48_07500 PF00583 Acetyltransferase (GNAT) family CVS48_07505 PF03976 Polyphosphate kinase 2 (PPK2) CVS48_07510 PF00753 Metallo-beta-lactamase superfamily CVS48_07515 PF01022 Bacterial regulatory protein, arsR family CVS48_07525 PF04143 CVS48_07525 CVS48_07530 PF00501 AMP-binding enzyme CVS48_07535 PF00005 ABC transporter CVS48_07540 PF13458 Periplasmic binding protein CVS48_07545 PF02653 CVS48_07545 CVS48_07550 PF02653 CVS48_07550 CVS48_07555 PF00005 ABC transporter CVS48_07555 PF12399 Branched-chain amino acid ATP-binding cassette transporter CVS48_07560 PF00501 AMP-binding enzyme CVS48_07565 PF00027 Cyclic nucleotide-binding domain CVS48_07565 PF13545 Crp-like helix-turn-helix domain CVS48_07570 PF01047 MarR family CVS48_07575 PF02566 OsmC-like protein CVS48_07580 PF01810 CVS48_07580 CVS48_07585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_07585 PF03466 LysR substrate binding domain CVS48_07590 PF04314 Protein of unknown function (DUF461) CVS48_07595 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CVS48_07595 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CVS48_07600 PF03372 Endonuclease/Exonuclease/phosphatase family CVS48_07605 PF00156 Phosphoribosyl transferase domain CVS48_07615 PF02637 GatB domain CVS48_07615 PF02934 GatB/GatE catalytic domain CVS48_07620 PF01425 Amidase CVS48_07625 PF02686 Glu-tRNAGln amidotransferase C subunit CVS48_07630 PF06723 MreB/Mbl protein CVS48_07635 PF04085 rod shape-determining protein MreC CVS48_07640 PF04093 CVS48_07640 CVS48_07645 PF00905 Penicillin binding protein transpeptidase domain CVS48_07645 PF03717 Penicillin-binding Protein dimerisation domain CVS48_07650 PF01098 CVS48_07650 CVS48_07655 PF02615 Malate/L-lactate dehydrogenase CVS48_07660 PF00939 Sodium:sulfate symporter transmembrane region CVS48_07665 PF00440 Bacterial regulatory proteins, tetR family CVS48_07670 PF13419 Haloacid dehalogenase-like hydrolase CVS48_07675 PF00696 Amino acid kinase family CVS48_07680 PF03180 NLPA lipoprotein CVS48_07685 PF08534 Redoxin CVS48_07690 PF04972 BON domain CVS48_07695 PF13580 SIS domain CVS48_07700 PF02021 Uncharacterised protein family UPF0102 CVS48_07705 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CVS48_07710 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CVS48_07715 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel CVS48_07715 PF05036 Sporulation related domain CVS48_07720 PF03668 CVS48_07720 CVS48_07725 PF00034 Cytochrome c CVS48_07730 PF00034 Cytochrome c CVS48_07730 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CVS48_07735 PF00155 Aminotransferase class I and II CVS48_07735 PF00392 Bacterial regulatory proteins, gntR family CVS48_07740 PF02603 HPr Serine kinase N terminus CVS48_07740 PF07475 HPr Serine kinase C-terminal domain CVS48_07745 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CVS48_07750 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CVS48_07755 PF00005 ABC transporter CVS48_07755 PF12399 Branched-chain amino acid ATP-binding cassette transporter CVS48_07760 PF03968 OstA-like protein CVS48_07765 PF06835 Lipopolysaccharide-assembly, LptC-related CVS48_07770 PF08282 haloacid dehalogenase-like hydrolase CVS48_07775 PF00571 CBS domain CVS48_07775 PF01380 SIS domain CVS48_07780 PF01370 NAD dependent epimerase/dehydratase family CVS48_07780 PF02222 ATP-grasp domain CVS48_07785 PF12802 MarR family CVS48_07790 PF01654 CVS48_07790 CVS48_07795 PF02322 CVS48_07795 CVS48_07800 PF08173 CVS48_07800 CVS48_07805 PF00005 ABC transporter CVS48_07805 PF00664 ABC transporter transmembrane region CVS48_07810 PF00005 ABC transporter CVS48_07810 PF00664 ABC transporter transmembrane region CVS48_07815 PF00156 Phosphoribosyl transferase domain CVS48_07820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_07820 PF03466 LysR substrate binding domain CVS48_07825 PF13663 CVS48_07825 CVS48_07830 PF13609 Gram-negative porin CVS48_07835 PF00291 Pyridoxal-phosphate dependent enzyme CVS48_07835 PF00585 C-terminal regulatory domain of Threonine dehydratase CVS48_07840 PF09335 CVS48_07840 CVS48_07845 PF01565 FAD binding domain CVS48_07845 PF02754 CVS48_07845 CVS48_07845 PF02913 FAD linked oxidases, C-terminal domain CVS48_07845 PF11880 CVS48_07845 CVS48_07845 PF12447 CVS48_07845 CVS48_07845 PF13183 4Fe-4S dicluster domain CVS48_07850 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_07855 PF01168 Alanine racemase, N-terminal domain CVS48_07860 PF00155 Aminotransferase class I and II CVS48_07865 PF00497 Bacterial extracellular solute-binding proteins, family 3 CVS48_07875 PF00682 HMGL-like CVS48_07880 PF02481 DNA recombination-mediator protein A CVS48_07885 PF01327 Polypeptide deformylase CVS48_07890 PF00551 Formyl transferase CVS48_07890 PF02911 Formyl transferase, C-terminal domain CVS48_07895 PF01928 CYTH domain CVS48_07900 PF01243 Pyridoxamine 5'-phosphate oxidase CVS48_07905 PF13419 Haloacid dehalogenase-like hydrolase CVS48_07915 PF03641 Possible lysine decarboxylase CVS48_07920 PF00210 Ferritin-like domain CVS48_07925 PF00919 Uncharacterized protein family UPF0004 CVS48_07925 PF04055 Radical SAM superfamily CVS48_07930 PF01810 CVS48_07930 CVS48_07935 PF01189 NOL1/NOP2/sun family CVS48_07940 PF14334 CVS48_07940 CVS48_07945 PF00512 His Kinase A (phospho-acceptor) domain CVS48_07945 PF00672 HAMP domain CVS48_07945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_07945 PF08448 PAS fold CVS48_07950 PF00072 Response regulator receiver domain CVS48_07955 PF02080 TrkA-C domain CVS48_07955 PF02254 TrkA-N domain CVS48_07960 PF02386 Cation transport protein CVS48_07965 PF04107 Glutamate-cysteine ligase family 2(GCS2) CVS48_07970 PF08241 Methyltransferase domain CVS48_07980 PF00156 Phosphoribosyl transferase domain CVS48_07985 PF00588 SpoU rRNA Methylase family CVS48_07990 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_08000 PF02556 Preprotein translocase subunit SecB CVS48_08005 PF00462 Glutaredoxin CVS48_08010 PF00581 Rhodanese-like domain CVS48_08015 PF00300 Histidine phosphatase superfamily (branch 1) CVS48_08020 PF01551 Peptidase family M23 CVS48_08025 PF03572 Peptidase family S41 CVS48_08025 PF13180 PDZ domain CVS48_08030 PF00899 ThiF family CVS48_08035 PF00990 GGDEF domain CVS48_08040 PF00392 Bacterial regulatory proteins, gntR family CVS48_08040 PF07729 FCD domain CVS48_08045 PF01565 FAD binding domain CVS48_08045 PF02913 FAD linked oxidases, C-terminal domain CVS48_08050 PF01964 ThiC family CVS48_08050 PF13667 ThiC-associated domain CVS48_08060 PF01381 Helix-turn-helix CVS48_08065 PF00486 Transcriptional regulatory protein, C terminal CVS48_08070 PF00696 Amino acid kinase family CVS48_08070 PF01472 PUA domain CVS48_08075 PF01018 GTP1/OBG CVS48_08075 PF01926 50S ribosome-binding GTPase CVS48_08080 PF01016 Ribosomal L27 protein CVS48_08085 PF00829 Ribosomal prokaryotic L21 protein CVS48_08090 PF01614 Bacterial transcriptional regulator CVS48_08090 PF09339 IclR helix-turn-helix domain CVS48_08095 PF01557 Fumarylacetoacetate (FAA) hydrolase family CVS48_08100 PF00348 Polyprenyl synthetase CVS48_08110 PF13614 AAA domain CVS48_08145 PF08900 CVS48_08145 CVS48_08155 PF00436 Single-strand binding protein family CVS48_08165 PF01131 DNA topoisomerase CVS48_08165 PF01396 CVS48_08165 CVS48_08165 PF01751 Toprim domain CVS48_08165 PF13342 CVS48_08165 CVS48_08180 PF00589 Phage integrase family CVS48_08185 PF03824 CVS48_08185 CVS48_08190 PF02583 Metal-sensitive transcriptional repressor CVS48_08200 PF13462 Thioredoxin CVS48_08205 PF02600 Disulfide bond formation protein DsbB CVS48_08215 PF01545 Cation efflux family CVS48_08220 PF00122 E1-E2 ATPase CVS48_08220 PF00702 haloacid dehalogenase-like hydrolase CVS48_08225 PF13663 CVS48_08225 CVS48_08230 PF13663 CVS48_08230 CVS48_08235 PF13663 CVS48_08235 CVS48_08240 PF13609 Gram-negative porin CVS48_08245 PF00072 Response regulator receiver domain CVS48_08245 PF00486 Transcriptional regulatory protein, C terminal CVS48_08250 PF00512 His Kinase A (phospho-acceptor) domain CVS48_08250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_08255 PF00072 Response regulator receiver domain CVS48_08255 PF00486 Transcriptional regulatory protein, C terminal CVS48_08260 PF02321 Outer membrane efflux protein CVS48_08265 PF16576 CVS48_08265 CVS48_08270 PF00873 AcrB/AcrD/AcrF family CVS48_08275 PF00535 Glycosyl transferase family 2 CVS48_08280 PF02366 CVS48_08280 CVS48_08285 PF13439 Glycosyltransferase Family 4 CVS48_08285 PF13692 Glycosyl transferases group 1 CVS48_08290 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CVS48_08295 PF00271 Helicase conserved C-terminal domain CVS48_08295 PF04851 Type III restriction enzyme, res subunit CVS48_08315 PF11679 CVS48_08315 CVS48_08345 PF12101 CVS48_08345 CVS48_08350 PF07419 PilM CVS48_08355 PF04917 CVS48_08355 CVS48_08360 PF00437 Type II/IV secretion system protein CVS48_08365 PF08805 PilS N terminal CVS48_08370 PF00482 Type II secretion system (T2SS), protein F CVS48_08375 PF00437 Type II/IV secretion system protein CVS48_08385 PF06864 CVS48_08385 CVS48_08390 PF00263 CVS48_08390 CVS48_08390 PF07655 CVS48_08390 CVS48_08395 PF03524 Conjugal transfer protein CVS48_08395 PF10671 Toxin co-regulated pilus biosynthesis protein Q CVS48_08400 PF03743 Bacterial conjugation TrbI-like protein CVS48_08405 PF03524 Conjugal transfer protein CVS48_08410 PF04335 VirB8 protein CVS48_08420 PF04610 CVS48_08420 CVS48_08440 PF05101 CVS48_08440 CVS48_08450 PF00437 Type II/IV secretion system protein CVS48_08455 PF01464 Transglycosylase SLT domain CVS48_08465 PF07514 Putative helicase CVS48_08465 PF07515 Protein of unknown function (DUF1528) CVS48_08470 PF12696 TraM recognition site of TraD and TraG CVS48_08475 PF14348 CVS48_08475 CVS48_08485 PF00589 Phage integrase family CVS48_08490 PF14331 CVS48_08490 CVS48_08495 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) CVS48_08500 PF05936 CVS48_08500 CVS48_08505 PF12790 Type VI secretion lipoprotein CVS48_08510 PF13665 CVS48_08510 CVS48_08515 PF12059 CVS48_08515 CVS48_08520 PF00805 Pentapeptide repeats (8 copies) CVS48_08520 PF13599 Pentapeptide repeats (9 copies) CVS48_08525 PF00805 Pentapeptide repeats (8 copies) CVS48_08525 PF09937 CVS48_08525 CVS48_08525 PF13599 Pentapeptide repeats (9 copies) CVS48_08530 PF05954 Phage late control gene D protein (GPD) CVS48_08535 PF00004 ATPase family associated with various cellular activities (AAA) CVS48_08535 PF07724 AAA domain (Cdc48 subfamily) CVS48_08535 PF10431 C-terminal, D2-small domain, of ClpB protein CVS48_08540 PF06996 CVS48_08540 CVS48_08545 PF05947 CVS48_08545 CVS48_08550 PF04965 Gene 25-like lysozyme CVS48_08555 PF05638 Protein of unknown function (DUF796) CVS48_08560 PF05943 CVS48_08560 CVS48_08565 PF05591 CVS48_08565 CVS48_08570 PF06812 CVS48_08570 CVS48_08570 PF16989 CVS48_08570 CVS48_08575 PF03704 Bacterial transcriptional activator domain CVS48_08575 PF13191 AAA ATPase domain CVS48_08580 PF00916 CVS48_08580 CVS48_08580 PF01740 STAS domain CVS48_08585 PF00665 Integrase core domain CVS48_08585 PF13518 Helix-turn-helix domain CVS48_08595 PF02469 Fasciclin domain CVS48_08600 PF13411 MerR HTH family regulatory protein CVS48_08605 PF05787 Bacterial protein of unknown function (DUF839) CVS48_08610 PF13458 Periplasmic binding protein CVS48_08615 PF00378 Enoyl-CoA hydratase/isomerase family CVS48_08620 PF00501 AMP-binding enzyme CVS48_08620 PF13193 AMP-binding enzyme C-terminal domain CVS48_08625 PF00440 Bacterial regulatory proteins, tetR family CVS48_08630 PF01575 MaoC like domain CVS48_08635 PF00106 short chain dehydrogenase CVS48_08640 PF13279 Thioesterase-like superfamily CVS48_08645 PF00171 Aldehyde dehydrogenase family CVS48_08650 PF00108 Thiolase, N-terminal domain CVS48_08650 PF02803 Thiolase, C-terminal domain CVS48_08660 PF00656 Caspase domain CVS48_08660 PF08238 Sel1 repeat CVS48_08670 PF08281 Sigma-70, region 4 CVS48_08695 PF00815 Histidinol dehydrogenase CVS48_08700 PF13561 Enoyl-(Acyl carrier protein) reductase CVS48_08705 PF00356 Bacterial regulatory proteins, lacI family CVS48_08705 PF13377 Periplasmic binding protein-like domain CVS48_08710 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_08715 PF03328 HpcH/HpaI aldolase/citrate lyase family CVS48_08725 PF00753 Metallo-beta-lactamase superfamily CVS48_08730 PF12697 Alpha/beta hydrolase family CVS48_08735 PF00392 Bacterial regulatory proteins, gntR family CVS48_08735 PF07729 FCD domain CVS48_08740 PF00005 ABC transporter CVS48_08745 PF00005 ABC transporter CVS48_08745 PF12399 Branched-chain amino acid ATP-binding cassette transporter CVS48_08750 PF02653 CVS48_08750 CVS48_08755 PF02653 CVS48_08755 CVS48_08760 PF13458 Periplasmic binding protein CVS48_08765 PF02627 Carboxymuconolactone decarboxylase family CVS48_08770 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CVS48_08770 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CVS48_08775 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_08780 PF04909 Amidohydrolase CVS48_08785 PF07690 Major Facilitator Superfamily CVS48_08790 PF00596 Class II Aldolase and Adducin N-terminal domain CVS48_08795 PF07690 Major Facilitator Superfamily CVS48_08800 PF01261 Xylose isomerase-like TIM barrel CVS48_08805 PF01370 NAD dependent epimerase/dehydratase family CVS48_08810 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CVS48_08810 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CVS48_08815 PF07005 Protein of unknown function, DUF1537 CVS48_08815 PF17042 CVS48_08815 CVS48_08820 PF00324 Amino acid permease CVS48_08825 PF00392 Bacterial regulatory proteins, gntR family CVS48_08825 PF07729 FCD domain CVS48_08830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_08830 PF03466 LysR substrate binding domain CVS48_08835 PF07690 Major Facilitator Superfamily CVS48_08840 PF10994 Protein of unknown function (DUF2817) CVS48_08845 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_08850 PF00005 ABC transporter CVS48_08850 PF08402 TOBE domain CVS48_08855 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_08860 PF01979 Amidohydrolase family CVS48_08865 PF01979 Amidohydrolase family CVS48_08870 PF02492 CobW/HypB/UreG, nucleotide-binding domain CVS48_08870 PF07683 Cobalamin synthesis protein cobW C-terminal domain CVS48_08875 PF13416 Bacterial extracellular solute-binding protein CVS48_08880 PF06983 3-demethylubiquinone-9 3-methyltransferase CVS48_08885 PF04221 RelB antitoxin CVS48_08890 PF05016 Plasmid stabilisation system protein CVS48_08895 PF00593 TonB dependent receptor CVS48_08895 PF07715 TonB-dependent Receptor Plug Domain CVS48_08900 PF13561 Enoyl-(Acyl carrier protein) reductase CVS48_08905 PF00676 Dehydrogenase E1 component CVS48_08905 PF02779 Transketolase, pyrimidine binding domain CVS48_08905 PF02780 Transketolase, C-terminal domain CVS48_08910 PF13561 Enoyl-(Acyl carrier protein) reductase CVS48_08915 PF00392 Bacterial regulatory proteins, gntR family CVS48_08915 PF07729 FCD domain CVS48_08920 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CVS48_08920 PF00364 Biotin-requiring enzyme CVS48_08920 PF02817 e3 binding domain CVS48_08925 PF13458 Periplasmic binding protein CVS48_08930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_08930 PF03466 LysR substrate binding domain CVS48_08935 PF00171 Aldehyde dehydrogenase family CVS48_08940 PF00732 GMC oxidoreductase CVS48_08940 PF05199 GMC oxidoreductase CVS48_08945 PF13458 Periplasmic binding protein CVS48_08950 PF02653 CVS48_08950 CVS48_08955 PF00005 ABC transporter CVS48_08955 PF02653 CVS48_08955 CVS48_08955 PF12399 Branched-chain amino acid ATP-binding cassette transporter CVS48_08960 PF00005 ABC transporter CVS48_08965 PF02515 CoA-transferase family III CVS48_08970 PF00682 HMGL-like CVS48_08975 PF01261 Xylose isomerase-like TIM barrel CVS48_08980 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_08985 PF00892 EamA-like transporter family CVS48_08990 PF01810 CVS48_08990 CVS48_08995 PF01037 AsnC family CVS48_08995 PF13412 Winged helix-turn-helix DNA-binding CVS48_09000 PF00795 Carbon-nitrogen hydrolase CVS48_09005 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CVS48_09010 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_09015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_09015 PF03466 LysR substrate binding domain CVS48_09020 PF01546 Peptidase family M20/M25/M40 CVS48_09020 PF07687 Peptidase dimerisation domain CVS48_09025 PF00924 Mechanosensitive ion channel CVS48_09030 PF13561 Enoyl-(Acyl carrier protein) reductase CVS48_09035 PF09084 NMT1/THI5 like CVS48_09040 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_09045 PF00005 ABC transporter CVS48_09050 PF05893 Acyl-CoA reductase (LuxC) CVS48_09055 PF04443 CVS48_09055 CVS48_09075 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CVS48_09075 PF01488 Shikimate / quinate 5-dehydrogenase CVS48_09075 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CVS48_09080 PF00472 RF-1 domain CVS48_09080 PF03462 PCRF domain CVS48_09085 PF05175 Methyltransferase small domain CVS48_09090 PF00462 Glutaredoxin CVS48_09095 PF02441 Flavoprotein CVS48_09105 PF03180 NLPA lipoprotein CVS48_09110 PF13561 Enoyl-(Acyl carrier protein) reductase CVS48_09115 PF00285 Citrate synthase CVS48_09120 PF00501 AMP-binding enzyme CVS48_09120 PF13193 AMP-binding enzyme C-terminal domain CVS48_09125 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_09130 PF01614 Bacterial transcriptional regulator CVS48_09130 PF09339 IclR helix-turn-helix domain CVS48_09135 PF06073 CVS48_09135 CVS48_09140 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CVS48_09140 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CVS48_09145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_09145 PF03466 LysR substrate binding domain CVS48_09150 PF11299 CVS48_09150 CVS48_09160 PF13417 Glutathione S-transferase, N-terminal domain CVS48_09165 PF00484 Carbonic anhydrase CVS48_09175 PF07769 CVS48_09175 CVS48_09180 PF04199 Putative cyclase CVS48_09185 PF00561 alpha/beta hydrolase fold CVS48_09190 PF03795 YCII-related domain CVS48_09195 PF02426 Muconolactone delta-isomerase CVS48_09200 PF01144 Coenzyme A transferase CVS48_09205 PF01144 Coenzyme A transferase CVS48_09210 PF01614 Bacterial transcriptional regulator CVS48_09210 PF09339 IclR helix-turn-helix domain CVS48_09215 PF13561 Enoyl-(Acyl carrier protein) reductase CVS48_09220 PF02667 CVS48_09220 CVS48_09225 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CVS48_09225 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CVS48_09230 PF00311 Phosphoenolpyruvate carboxylase CVS48_09235 PF06508 Queuosine biosynthesis protein QueC CVS48_09240 PF07690 Major Facilitator Superfamily CVS48_09245 PF13420 Acetyltransferase (GNAT) domain CVS48_09250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_09250 PF03466 LysR substrate binding domain CVS48_09255 PF00920 Dehydratase family CVS48_09260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_09260 PF03466 LysR substrate binding domain CVS48_09265 PF00665 Integrase core domain CVS48_09265 PF13518 Helix-turn-helix domain CVS48_09270 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CVS48_09270 PF07992 Pyridine nucleotide-disulphide oxidoreductase CVS48_09275 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CVS48_09275 PF00364 Biotin-requiring enzyme CVS48_09275 PF02817 e3 binding domain CVS48_09280 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CVS48_09285 PF00676 Dehydrogenase E1 component CVS48_09285 PF02779 Transketolase, pyrimidine binding domain CVS48_09285 PF02780 Transketolase, C-terminal domain CVS48_09290 PF13561 Enoyl-(Acyl carrier protein) reductase CVS48_09295 PF00005 ABC transporter CVS48_09300 PF00005 ABC transporter CVS48_09300 PF12399 Branched-chain amino acid ATP-binding cassette transporter CVS48_09305 PF02653 CVS48_09305 CVS48_09310 PF02653 CVS48_09310 CVS48_09315 PF13458 Periplasmic binding protein CVS48_09320 PF13561 Enoyl-(Acyl carrier protein) reductase CVS48_09325 PF00392 Bacterial regulatory proteins, gntR family CVS48_09325 PF07729 FCD domain CVS48_09335 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) CVS48_09340 PF02834 LigT like Phosphoesterase CVS48_09345 PF03975 CheD chemotactic sensory transduction CVS48_09350 PF02687 CVS48_09350 CVS48_09355 PF00005 ABC transporter CVS48_09360 PF00497 Bacterial extracellular solute-binding proteins, family 3 CVS48_09365 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_09370 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_09375 PF00005 ABC transporter CVS48_09380 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_09385 PF13458 Periplasmic binding protein CVS48_09390 PF01494 FAD binding domain CVS48_09395 PF12831 FAD dependent oxidoreductase CVS48_09400 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_09405 PF01817 Chorismate mutase type II CVS48_09410 PF02798 Glutathione S-transferase, N-terminal domain CVS48_09410 PF14497 Glutathione S-transferase, C-terminal domain CVS48_09415 PF01557 Fumarylacetoacetate (FAA) hydrolase family CVS48_09420 PF07883 Cupin domain CVS48_09425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_09425 PF03466 LysR substrate binding domain CVS48_09435 PF02321 Outer membrane efflux protein CVS48_09440 PF00873 AcrB/AcrD/AcrF family CVS48_09445 PF16576 CVS48_09445 CVS48_09455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_09455 PF03466 LysR substrate binding domain CVS48_09460 PF01594 CVS48_09460 CVS48_09465 PF05721 Phytanoyl-CoA dioxygenase (PhyH) CVS48_09470 PF01614 Bacterial transcriptional regulator CVS48_09470 PF09339 IclR helix-turn-helix domain CVS48_09475 PF00872 CVS48_09475 CVS48_09480 PF00701 Dihydrodipicolinate synthetase family CVS48_09485 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_09490 PF00005 ABC transporter CVS48_09490 PF08402 TOBE domain CVS48_09495 PF13416 Bacterial extracellular solute-binding protein CVS48_09500 PF01565 FAD binding domain CVS48_09500 PF02913 FAD linked oxidases, C-terminal domain CVS48_09505 PF03807 NADP oxidoreductase coenzyme F420-dependent CVS48_09505 PF14748 Pyrroline-5-carboxylate reductase dimerisation CVS48_09510 PF07690 Major Facilitator Superfamily CVS48_09515 PF13560 Helix-turn-helix domain CVS48_09520 PF03551 Transcriptional regulator PadR-like family CVS48_09525 PF04954 Siderophore-interacting protein CVS48_09525 PF08021 Siderophore-interacting FAD-binding domain CVS48_09530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_09530 PF03466 LysR substrate binding domain CVS48_09535 PF13714 Phosphoenolpyruvate phosphomutase CVS48_09540 PF14903 CVS48_09540 CVS48_09545 PF14903 CVS48_09545 CVS48_09550 PF07883 Cupin domain CVS48_09555 PF12167 CVS48_09555 CVS48_09560 PF04115 Ureidoglycolate hydrolase CVS48_09570 PF06742 Protein of unknown function (DUF1214) CVS48_09570 PF06863 Protein of unknown function (DUF1254) CVS48_09575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_09575 PF03466 LysR substrate binding domain CVS48_09580 PF13561 Enoyl-(Acyl carrier protein) reductase CVS48_09585 PF13458 Periplasmic binding protein CVS48_09590 PF05853 Prokaryotic protein of unknown function (DUF849) CVS48_09595 PF13616 PPIC-type PPIASE domain CVS48_09600 PF13245 Part of AAA domain CVS48_09600 PF13361 UvrD-like helicase C-terminal domain CVS48_09605 PF00497 Bacterial extracellular solute-binding proteins, family 3 CVS48_09610 PF13515 CVS48_09610 CVS48_09615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_09615 PF03466 LysR substrate binding domain CVS48_09620 PF01979 Amidohydrolase family CVS48_09625 PF00083 Sugar (and other) transporter CVS48_09630 PF13185 GAF domain CVS48_09635 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CVS48_09640 PF00857 Isochorismatase family CVS48_09650 PF00561 alpha/beta hydrolase fold CVS48_09660 PF01494 FAD binding domain CVS48_09665 PF00111 2Fe-2S iron-sulfur cluster binding domain CVS48_09665 PF01799 [2Fe-2S] binding domain CVS48_09670 PF00034 Cytochrome c CVS48_09670 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CVS48_09675 PF07690 Major Facilitator Superfamily CVS48_09680 PF01047 MarR family CVS48_09690 PF13242 HAD-hyrolase-like CVS48_09725 PF00583 Acetyltransferase (GNAT) family CVS48_09735 PF00860 Permease family CVS48_09740 PF00183 Hsp90 protein CVS48_09740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_09745 PF13560 Helix-turn-helix domain CVS48_09750 PF07804 HipA-like C-terminal domain CVS48_09750 PF13657 HipA N-terminal domain CVS48_09755 PF13380 CoA binding domain CVS48_09755 PF13549 ATP-grasp domain CVS48_09755 PF13607 Succinyl-CoA ligase like flavodoxin domain CVS48_09760 PF00107 Zinc-binding dehydrogenase CVS48_09765 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CVS48_09765 PF02770 Acyl-CoA dehydrogenase, middle domain CVS48_09765 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CVS48_09770 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_09775 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CVS48_09775 PF02770 Acyl-CoA dehydrogenase, middle domain CVS48_09775 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CVS48_09780 PF01614 Bacterial transcriptional regulator CVS48_09780 PF09339 IclR helix-turn-helix domain CVS48_09785 PF09339 IclR helix-turn-helix domain CVS48_09790 PF07690 Major Facilitator Superfamily CVS48_09800 PF07690 Major Facilitator Superfamily CVS48_09805 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CVS48_09805 PF13378 Enolase C-terminal domain-like CVS48_09810 PF01081 KDPG and KHG aldolase CVS48_09820 PF01614 Bacterial transcriptional regulator CVS48_09820 PF09339 IclR helix-turn-helix domain CVS48_09825 PF00043 Glutathione S-transferase, C-terminal domain CVS48_09825 PF13417 Glutathione S-transferase, N-terminal domain CVS48_09830 PF01510 N-acetylmuramoyl-L-alanine amidase CVS48_09840 PF01578 CVS48_09840 CVS48_09845 PF00448 SRP54-type protein, GTPase domain CVS48_09845 PF02881 SRP54-type protein, helical bundle domain CVS48_09845 PF02978 Signal peptide binding domain CVS48_09850 PF01476 LysM domain CVS48_09850 PF04972 BON domain CVS48_09860 PF02597 ThiS family CVS48_09865 PF00561 alpha/beta hydrolase fold CVS48_09870 PF02390 Putative methyltransferase CVS48_09880 PF00392 Bacterial regulatory proteins, gntR family CVS48_09880 PF07729 FCD domain CVS48_09885 PF05544 Proline racemase CVS48_09890 PF00171 Aldehyde dehydrogenase family CVS48_09895 PF01266 FAD dependent oxidoreductase CVS48_09900 PF05544 Proline racemase CVS48_09905 PF00701 Dihydrodipicolinate synthetase family CVS48_09915 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_09920 PF00005 ABC transporter CVS48_09925 PF00497 Bacterial extracellular solute-binding proteins, family 3 CVS48_09935 PF13560 Helix-turn-helix domain CVS48_09940 PF07804 HipA-like C-terminal domain CVS48_09940 PF13657 HipA N-terminal domain CVS48_09950 PF00892 EamA-like transporter family CVS48_09955 PF00290 Tryptophan synthase alpha chain CVS48_09960 PF00291 Pyridoxal-phosphate dependent enzyme CVS48_09965 PF00027 Cyclic nucleotide-binding domain CVS48_09965 PF13545 Crp-like helix-turn-helix domain CVS48_09970 PF13458 Periplasmic binding protein CVS48_09975 PF05853 Prokaryotic protein of unknown function (DUF849) CVS48_09980 PF13561 Enoyl-(Acyl carrier protein) reductase CVS48_09985 PF13738 Pyridine nucleotide-disulphide oxidoreductase CVS48_09990 PF00005 ABC transporter CVS48_09990 PF08402 TOBE domain CVS48_09995 PF00107 Zinc-binding dehydrogenase CVS48_09995 PF08240 Alcohol dehydrogenase GroES-like domain CVS48_10000 PF13410 Glutathione S-transferase, C-terminal domain CVS48_10000 PF13417 Glutathione S-transferase, N-terminal domain CVS48_10005 PF01220 Dehydroquinase class II CVS48_10010 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CVS48_10015 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_10020 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_10025 PF13343 Bacterial extracellular solute-binding protein CVS48_10030 PF01042 Endoribonuclease L-PSP CVS48_10035 PF06267 Family of unknown function (DUF1028) CVS48_10040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_10040 PF03466 LysR substrate binding domain CVS48_10045 PF01569 PAP2 superfamily CVS48_10045 PF12951 CVS48_10045 CVS48_10050 PF00206 Lyase CVS48_10050 PF14698 Argininosuccinate lyase C-terminal CVS48_10055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_10055 PF03466 LysR substrate binding domain CVS48_10060 PF07690 Major Facilitator Superfamily CVS48_10065 PF01266 FAD dependent oxidoreductase CVS48_10070 PF05656 CVS48_10070 CVS48_10080 PF00392 Bacterial regulatory proteins, gntR family CVS48_10085 PF12680 SnoaL-like domain CVS48_10090 PF00171 Aldehyde dehydrogenase family CVS48_10095 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_10100 PF02515 CoA-transferase family III CVS48_10105 PF13452 N-terminal half of MaoC dehydratase CVS48_10110 PF00501 AMP-binding enzyme CVS48_10110 PF13193 AMP-binding enzyme C-terminal domain CVS48_10115 PF01614 Bacterial transcriptional regulator CVS48_10115 PF09339 IclR helix-turn-helix domain CVS48_10120 PF03061 Thioesterase superfamily CVS48_10125 PF00474 Sodium:solute symporter family CVS48_10130 PF11663 CVS48_10130 CVS48_10135 PF15937 CVS48_10135 CVS48_10140 PF04303 PrpF protein CVS48_10145 PF00330 Aconitase family (aconitate hydratase) CVS48_10145 PF00694 Aconitase C-terminal domain CVS48_10150 PF00392 Bacterial regulatory proteins, gntR family CVS48_10150 PF07729 FCD domain CVS48_10155 PF12680 SnoaL-like domain CVS48_10155 PF13738 Pyridine nucleotide-disulphide oxidoreductase CVS48_10160 PF00158 Sigma-54 interaction domain CVS48_10160 PF01590 GAF domain CVS48_10160 PF02954 Bacterial regulatory protein, Fis family CVS48_10170 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_10175 PF00561 alpha/beta hydrolase fold CVS48_10180 PF06684 Amino acid synthesis CVS48_10185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_10185 PF03466 LysR substrate binding domain CVS48_10190 PF00753 Metallo-beta-lactamase superfamily CVS48_10195 PF00005 ABC transporter CVS48_10200 PF12679 CVS48_10200 CVS48_10205 PF09822 CVS48_10205 CVS48_10215 PF02653 CVS48_10215 CVS48_10220 PF02653 CVS48_10220 CVS48_10225 PF00005 ABC transporter CVS48_10230 PF00005 ABC transporter CVS48_10235 PF00171 Aldehyde dehydrogenase family CVS48_10240 PF13561 Enoyl-(Acyl carrier protein) reductase CVS48_10245 PF00107 Zinc-binding dehydrogenase CVS48_10245 PF08240 Alcohol dehydrogenase GroES-like domain CVS48_10250 PF13458 Periplasmic binding protein CVS48_10255 PF13759 Putative 2OG-Fe(II) oxygenase CVS48_10275 PF14124 CVS48_10275 CVS48_10285 PF00872 CVS48_10285 CVS48_10300 PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) CVS48_10305 PF00067 Cytochrome P450 CVS48_10305 PF00111 2Fe-2S iron-sulfur cluster binding domain CVS48_10305 PF00175 Oxidoreductase NAD-binding domain CVS48_10310 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_10315 PF01614 Bacterial transcriptional regulator CVS48_10315 PF09339 IclR helix-turn-helix domain CVS48_10320 PF01048 Phosphorylase superfamily CVS48_10325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_10330 PF00072 Response regulator receiver domain CVS48_10330 PF00486 Transcriptional regulatory protein, C terminal CVS48_10335 PF02683 CVS48_10335 CVS48_10340 PF00578 AhpC/TSA family CVS48_10370 PF00043 Glutathione S-transferase, C-terminal domain CVS48_10370 PF02798 Glutathione S-transferase, N-terminal domain CVS48_10375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_10375 PF03466 LysR substrate binding domain CVS48_10380 PF00890 FAD binding domain CVS48_10390 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_10400 PF00155 Aminotransferase class I and II CVS48_10400 PF00392 Bacterial regulatory proteins, gntR family CVS48_10405 PF10617 CVS48_10405 CVS48_10410 PF02322 CVS48_10410 CVS48_10415 PF01654 CVS48_10415 CVS48_10420 PF00392 Bacterial regulatory proteins, gntR family CVS48_10420 PF07729 FCD domain CVS48_10425 PF00005 ABC transporter CVS48_10430 PF00005 ABC transporter CVS48_10435 PF02653 CVS48_10435 CVS48_10440 PF02653 CVS48_10440 CVS48_10445 PF13458 Periplasmic binding protein CVS48_10450 PF13561 Enoyl-(Acyl carrier protein) reductase CVS48_10460 PF00563 EAL domain CVS48_10460 PF12792 CVS48_10460 CVS48_10465 PF02254 TrkA-N domain CVS48_10465 PF07885 Ion channel CVS48_10470 PF00486 Transcriptional regulatory protein, C terminal CVS48_10475 PF01381 Helix-turn-helix CVS48_10480 PF01757 CVS48_10480 CVS48_10485 PF03724 META domain CVS48_10490 PF03724 META domain CVS48_10495 PF00581 Rhodanese-like domain CVS48_10505 PF01850 PIN domain CVS48_10510 PF01588 Putative tRNA binding domain CVS48_10510 PF09334 tRNA synthetases class I (M) CVS48_10520 PF01883 Domain of unknown function DUF59 CVS48_10520 PF10609 ParA/MinD ATPase like CVS48_10525 PF01103 Surface antigen CVS48_10525 PF17243 CVS48_10525 CVS48_10530 PF04357 CVS48_10530 CVS48_10535 PF00692 dUTPase CVS48_10540 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CVS48_10540 PF13673 Acetyltransferase (GNAT) domain CVS48_10545 PF00990 GGDEF domain CVS48_10550 PF00583 Acetyltransferase (GNAT) family CVS48_10560 PF01276 Orn/Lys/Arg decarboxylase, major domain CVS48_10560 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CVS48_10560 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CVS48_10565 PF03486 HI0933-like protein CVS48_10570 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CVS48_10570 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CVS48_10575 PF02535 CVS48_10575 CVS48_10580 PF01571 Aminomethyltransferase folate-binding domain CVS48_10580 PF08669 Glycine cleavage T-protein C-terminal barrel domain CVS48_10585 PF01597 Glycine cleavage H-protein CVS48_10590 PF02347 Glycine cleavage system P-protein CVS48_10595 PF06097 CVS48_10595 CVS48_10595 PF10722 Putative bacterial sensory transduction regulator CVS48_10600 PF07171 MlrC C-terminus CVS48_10600 PF07364 Protein of unknown function (DUF1485) CVS48_10605 PF01425 Amidase CVS48_10610 PF00005 ABC transporter CVS48_10610 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS48_10615 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_10615 PF12911 CVS48_10615 CVS48_10620 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_10625 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CVS48_10630 PF07171 MlrC C-terminus CVS48_10630 PF07364 Protein of unknown function (DUF1485) CVS48_10635 PF00171 Aldehyde dehydrogenase family CVS48_10640 PF00202 Aminotransferase class-III CVS48_10645 PF00155 Aminotransferase class I and II CVS48_10645 PF00392 Bacterial regulatory proteins, gntR family CVS48_10650 PF00186 Dihydrofolate reductase CVS48_10655 PF00563 EAL domain CVS48_10655 PF00990 GGDEF domain CVS48_10655 PF03707 CVS48_10655 CVS48_10660 PF00303 Thymidylate synthase CVS48_10665 PF02566 OsmC-like protein CVS48_10670 PF03232 CVS48_10670 CVS48_10675 PF00953 Glycosyl transferase family 4 CVS48_10680 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CVS48_10680 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CVS48_10680 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CVS48_10685 PF01370 NAD dependent epimerase/dehydratase family CVS48_10690 PF03023 CVS48_10690 CVS48_10695 PF00534 Glycosyl transferases group 1 CVS48_10695 PF13439 Glycosyltransferase Family 4 CVS48_10700 PF00733 Asparagine synthase CVS48_10700 PF13537 Glutamine amidotransferase domain CVS48_10705 PF00534 Glycosyl transferases group 1 CVS48_10705 PF13579 Glycosyl transferase 4-like domain CVS48_10710 PF00534 Glycosyl transferases group 1 CVS48_10710 PF13439 Glycosyltransferase Family 4 CVS48_10715 PF00534 Glycosyl transferases group 1 CVS48_10715 PF13477 Glycosyl transferase 4-like CVS48_10720 PF00342 Phosphoglucose isomerase CVS48_10725 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CVS48_10725 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CVS48_10725 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CVS48_10725 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CVS48_10735 PF01565 FAD binding domain CVS48_10735 PF02913 FAD linked oxidases, C-terminal domain CVS48_10740 PF00072 Response regulator receiver domain CVS48_10740 PF00486 Transcriptional regulatory protein, C terminal CVS48_10745 PF00512 His Kinase A (phospho-acceptor) domain CVS48_10745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_10750 PF01569 PAP2 superfamily CVS48_10755 PF06808 CVS48_10755 CVS48_10760 PF04290 CVS48_10760 CVS48_10765 PF03480 Bacterial extracellular solute-binding protein, family 7 CVS48_10770 PF08450 SMP-30/Gluconolaconase/LRE-like region CVS48_10775 PF01370 NAD dependent epimerase/dehydratase family CVS48_10780 PF00392 Bacterial regulatory proteins, gntR family CVS48_10780 PF07729 FCD domain CVS48_10785 PF00884 Sulfatase CVS48_10790 PF00665 Integrase core domain CVS48_10790 PF13518 Helix-turn-helix domain CVS48_10795 PF01557 Fumarylacetoacetate (FAA) hydrolase family CVS48_10795 PF09298 Fumarylacetoacetase N-terminal CVS48_10800 PF04209 homogentisate 1,2-dioxygenase CVS48_10805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_10805 PF03466 LysR substrate binding domain CVS48_10810 PF10932 CVS48_10810 CVS48_10815 PF01494 FAD binding domain CVS48_10820 PF00753 Metallo-beta-lactamase superfamily CVS48_10825 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CVS48_10825 PF06827 Zinc finger found in FPG and IleRS CVS48_10825 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CVS48_10830 PF13432 Tetratricopeptide repeat CVS48_10830 PF14559 Tetratricopeptide repeat CVS48_10835 PF03550 Outer membrane lipoprotein LolB CVS48_10840 PF02028 BCCT family transporter CVS48_10845 PF00440 Bacterial regulatory proteins, tetR family CVS48_10845 PF13977 Bacterial transcriptional repressor CVS48_10850 PF00171 Aldehyde dehydrogenase family CVS48_10855 PF00732 GMC oxidoreductase CVS48_10855 PF05199 GMC oxidoreductase CVS48_10860 PF00288 GHMP kinases N terminal domain CVS48_10860 PF08544 GHMP kinases C terminal CVS48_10870 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CVS48_10870 PF14572 Phosphoribosyl synthetase-associated domain CVS48_10875 PF01386 Ribosomal L25p family CVS48_10875 PF14693 Ribosomal protein TL5, C-terminal domain CVS48_10880 PF01195 Peptidyl-tRNA hydrolase CVS48_10885 PF02517 CAAX protease self-immunity CVS48_10890 PF01926 50S ribosome-binding GTPase CVS48_10890 PF06071 Protein of unknown function (DUF933) CVS48_10895 PF06250 CVS48_10895 CVS48_10905 PF13683 CVS48_10905 CVS48_10910 PF07690 Major Facilitator Superfamily CVS48_10915 PF07366 SnoaL-like polyketide cyclase CVS48_10925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_10925 PF03466 LysR substrate binding domain CVS48_10930 PF02661 Fic/DOC family CVS48_10930 PF13776 CVS48_10930 CVS48_10935 PF01047 MarR family CVS48_10940 PF07690 Major Facilitator Superfamily CVS48_10945 PF05170 CVS48_10945 CVS48_10950 PF03476 MOSC N-terminal beta barrel domain CVS48_10955 PF03594 CVS48_10955 CVS48_10960 PF00037 4Fe-4S binding domain CVS48_10965 PF01467 Cytidylyltransferase CVS48_10970 PF03602 Conserved hypothetical protein 95 CVS48_10980 PF00448 SRP54-type protein, GTPase domain CVS48_10980 PF02881 SRP54-type protein, helical bundle domain CVS48_10985 PF04185 Phosphoesterase family CVS48_10985 PF05506 CVS48_10985 CVS48_10990 PF01928 CYTH domain CVS48_10990 PF05235 CHAD domain CVS48_10995 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_11000 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_11005 PF00005 ABC transporter CVS48_11010 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein CVS48_11015 PF01614 Bacterial transcriptional regulator CVS48_11015 PF09339 IclR helix-turn-helix domain CVS48_11020 PF08282 haloacid dehalogenase-like hydrolase CVS48_11025 PF00925 GTP cyclohydrolase II CVS48_11025 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CVS48_11030 PF00885 6,7-dimethyl-8-ribityllumazine synthase CVS48_11035 PF01029 NusB family CVS48_11040 PF00586 AIR synthase related protein, N-terminal domain CVS48_11040 PF02769 AIR synthase related protein, C-terminal domain CVS48_11045 PF04608 Phosphatidylglycerophosphatase A CVS48_11050 PF02464 Competence-damaged protein CVS48_11055 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CVS48_11060 PF07992 Pyridine nucleotide-disulphide oxidoreductase CVS48_11065 PF01219 Prokaryotic diacylglycerol kinase CVS48_11070 PF00392 Bacterial regulatory proteins, gntR family CVS48_11070 PF07729 FCD domain CVS48_11075 PF03480 Bacterial extracellular solute-binding protein, family 7 CVS48_11080 PF04290 CVS48_11080 CVS48_11085 PF06808 CVS48_11085 CVS48_11090 PF13561 Enoyl-(Acyl carrier protein) reductase CVS48_11095 PF01557 Fumarylacetoacetate (FAA) hydrolase family CVS48_11100 PF04295 CVS48_11100 CVS48_11100 PF08666 SAF domain CVS48_11105 PF01232 Mannitol dehydrogenase Rossmann domain CVS48_11105 PF08125 Mannitol dehydrogenase C-terminal domain CVS48_11110 PF02615 Malate/L-lactate dehydrogenase CVS48_11115 PF00005 ABC transporter CVS48_11120 PF00005 ABC transporter CVS48_11120 PF12399 Branched-chain amino acid ATP-binding cassette transporter CVS48_11125 PF02653 CVS48_11125 CVS48_11130 PF02653 CVS48_11130 CVS48_11135 PF13458 Periplasmic binding protein CVS48_11140 PF04909 Amidohydrolase CVS48_11145 PF06052 3-hydroxyanthranilic acid dioxygenase CVS48_11150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_11150 PF03466 LysR substrate binding domain CVS48_11155 PF03631 CVS48_11155 CVS48_11160 PF00118 TCP-1/cpn60 chaperonin family CVS48_11165 PF00166 Chaperonin 10 Kd subunit CVS48_11170 PF00378 Enoyl-CoA hydratase/isomerase family CVS48_11175 PF02515 CoA-transferase family III CVS48_11180 PF01614 Bacterial transcriptional regulator CVS48_11180 PF09339 IclR helix-turn-helix domain CVS48_11185 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CVS48_11185 PF02770 Acyl-CoA dehydrogenase, middle domain CVS48_11185 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CVS48_11190 PF13380 CoA binding domain CVS48_11190 PF13549 ATP-grasp domain CVS48_11190 PF13607 Succinyl-CoA ligase like flavodoxin domain CVS48_11195 PF01575 MaoC like domain CVS48_11200 PF13561 Enoyl-(Acyl carrier protein) reductase CVS48_11205 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_11210 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_11215 PF01575 MaoC like domain CVS48_11215 PF13452 N-terminal half of MaoC dehydratase CVS48_11220 PF00501 AMP-binding enzyme CVS48_11220 PF13193 AMP-binding enzyme C-terminal domain CVS48_11225 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CVS48_11225 PF02770 Acyl-CoA dehydrogenase, middle domain CVS48_11225 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CVS48_11230 PF02803 Thiolase, C-terminal domain CVS48_11235 PF01796 CVS48_11235 CVS48_11235 PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) CVS48_11240 PF00884 Sulfatase CVS48_11245 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_11250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_11250 PF03466 LysR substrate binding domain CVS48_11265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_11265 PF03466 LysR substrate binding domain CVS48_11275 PF13561 Enoyl-(Acyl carrier protein) reductase CVS48_11280 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CVS48_11285 PF00174 Oxidoreductase molybdopterin binding domain CVS48_11285 PF03404 Mo-co oxidoreductase dimerisation domain CVS48_11290 PF12697 Alpha/beta hydrolase family CVS48_11295 PF00990 GGDEF domain CVS48_11295 PF08447 PAS fold CVS48_11305 PF00486 Transcriptional regulatory protein, C terminal CVS48_11305 PF08447 PAS fold CVS48_11310 PF03797 Autotransporter beta-domain CVS48_11315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_11315 PF03466 LysR substrate binding domain CVS48_11320 PF02515 CoA-transferase family III CVS48_11325 PF00107 Zinc-binding dehydrogenase CVS48_11325 PF08240 Alcohol dehydrogenase GroES-like domain CVS48_11330 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_11335 PF07690 Major Facilitator Superfamily CVS48_11340 PF01047 MarR family CVS48_11345 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CVS48_11350 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CVS48_11355 PF00171 Aldehyde dehydrogenase family CVS48_11360 PF01042 Endoribonuclease L-PSP CVS48_11365 PF07859 alpha/beta hydrolase fold CVS48_11370 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_11375 PF00378 Enoyl-CoA hydratase/isomerase family CVS48_11380 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_11385 PF00501 AMP-binding enzyme CVS48_11385 PF13193 AMP-binding enzyme C-terminal domain CVS48_11390 PF00378 Enoyl-CoA hydratase/isomerase family CVS48_11395 PF01614 Bacterial transcriptional regulator CVS48_11395 PF09339 IclR helix-turn-helix domain CVS48_11400 PF00072 Response regulator receiver domain CVS48_11400 PF00486 Transcriptional regulatory protein, C terminal CVS48_11405 PF00512 His Kinase A (phospho-acceptor) domain CVS48_11405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_11410 PF00144 Beta-lactamase CVS48_11415 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CVS48_11420 PF00534 Glycosyl transferases group 1 CVS48_11420 PF13439 Glycosyltransferase Family 4 CVS48_11425 PF12146 Putative lysophospholipase CVS48_11430 PF07978 NIPSNAP CVS48_11435 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_11440 PF00205 Thiamine pyrophosphate enzyme, central domain CVS48_11440 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CVS48_11440 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CVS48_11445 PF12833 Helix-turn-helix domain CVS48_11450 PF01402 Ribbon-helix-helix protein, copG family CVS48_11455 PF05016 Plasmid stabilisation system protein CVS48_11460 PF00561 alpha/beta hydrolase fold CVS48_11465 PF13410 Glutathione S-transferase, C-terminal domain CVS48_11465 PF13417 Glutathione S-transferase, N-terminal domain CVS48_11470 PF00083 Sugar (and other) transporter CVS48_11475 PF12833 Helix-turn-helix domain CVS48_11475 PF14525 CVS48_11475 CVS48_11480 PF00596 Class II Aldolase and Adducin N-terminal domain CVS48_11485 PF07277 CVS48_11485 CVS48_11490 PF05860 haemagglutination activity domain CVS48_11495 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CVS48_11495 PF08479 POTRA domain, ShlB-type CVS48_11500 PF00072 Response regulator receiver domain CVS48_11500 PF12833 Helix-turn-helix domain CVS48_11505 PF00072 Response regulator receiver domain CVS48_11505 PF00512 His Kinase A (phospho-acceptor) domain CVS48_11505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_11505 PF07695 CVS48_11505 CVS48_11505 PF07696 7TMR-DISM extracellular 2 CVS48_11510 PF12697 Alpha/beta hydrolase family CVS48_11515 PF01565 FAD binding domain CVS48_11515 PF02913 FAD linked oxidases, C-terminal domain CVS48_11520 PF00884 Sulfatase CVS48_11530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_11530 PF03466 LysR substrate binding domain CVS48_11540 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_11545 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CVS48_11545 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CVS48_11550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_11550 PF03466 LysR substrate binding domain CVS48_11555 PF07690 Major Facilitator Superfamily CVS48_11560 PF00440 Bacterial regulatory proteins, tetR family CVS48_11565 PF08450 SMP-30/Gluconolaconase/LRE-like region CVS48_11570 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_11575 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_11580 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_11585 PF04199 Putative cyclase CVS48_11590 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CVS48_11590 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CVS48_11595 PF03737 Demethylmenaquinone methyltransferase CVS48_11600 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_11605 PF04909 Amidohydrolase CVS48_11610 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_11615 PF01614 Bacterial transcriptional regulator CVS48_11615 PF09339 IclR helix-turn-helix domain CVS48_11620 PF00384 Molybdopterin oxidoreductase CVS48_11620 PF01568 Molydopterin dinucleotide binding domain CVS48_11625 PF00581 Rhodanese-like domain CVS48_11630 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_11635 PF00206 Lyase CVS48_11635 PF10397 Adenylosuccinate lyase C-terminus CVS48_11640 PF01565 FAD binding domain CVS48_11640 PF02913 FAD linked oxidases, C-terminal domain CVS48_11645 PF01614 Bacterial transcriptional regulator CVS48_11645 PF09339 IclR helix-turn-helix domain CVS48_11650 PF03972 MmgE/PrpD family CVS48_11655 PF01850 PIN domain CVS48_11660 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system CVS48_11665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_11665 PF03466 LysR substrate binding domain CVS48_11670 PF00465 Iron-containing alcohol dehydrogenase CVS48_11675 PF00083 Sugar (and other) transporter CVS48_11675 PF07690 Major Facilitator Superfamily CVS48_11680 PF00171 Aldehyde dehydrogenase family CVS48_11685 PF03929 CVS48_11685 CVS48_11690 PF04542 Sigma-70 region 2 CVS48_11690 PF08281 Sigma-70, region 4 CVS48_11695 PF04773 FecR protein CVS48_11695 PF16220 CVS48_11695 CVS48_11700 PF00593 TonB dependent receptor CVS48_11700 PF07660 Secretin and TonB N terminus short domain CVS48_11700 PF07715 TonB-dependent Receptor Plug Domain CVS48_11705 PF00892 EamA-like transporter family CVS48_11710 PF02311 AraC-like ligand binding domain CVS48_11710 PF12833 Helix-turn-helix domain CVS48_11715 PF00593 TonB dependent receptor CVS48_11715 PF07715 TonB-dependent Receptor Plug Domain CVS48_11720 PF11162 CVS48_11720 CVS48_11725 PF02627 Carboxymuconolactone decarboxylase family CVS48_11730 PF13460 NADH(P)-binding CVS48_11735 PF02566 OsmC-like protein CVS48_11740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_11740 PF03466 LysR substrate binding domain CVS48_11745 PF07883 Cupin domain CVS48_11750 PF04542 Sigma-70 region 2 CVS48_11750 PF08281 Sigma-70, region 4 CVS48_11755 PF09335 CVS48_11755 CVS48_11760 PF00561 alpha/beta hydrolase fold CVS48_11765 PF00753 Metallo-beta-lactamase superfamily CVS48_11770 PF13561 Enoyl-(Acyl carrier protein) reductase CVS48_11780 PF01699 Sodium/calcium exchanger protein CVS48_11785 PF13441 CVS48_11785 CVS48_11790 PF00155 Aminotransferase class I and II CVS48_11790 PF00392 Bacterial regulatory proteins, gntR family CVS48_11795 PF03594 CVS48_11795 CVS48_11805 PF05681 CVS48_11805 CVS48_11805 PF05683 Fumarase C-terminus CVS48_11810 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_11815 PF00206 Lyase CVS48_11815 PF10397 Adenylosuccinate lyase C-terminus CVS48_11820 PF00392 Bacterial regulatory proteins, gntR family CVS48_11820 PF07702 UTRA domain CVS48_11825 PF01810 CVS48_11825 CVS48_11830 PF13561 Enoyl-(Acyl carrier protein) reductase CVS48_11835 PF00723 Glycosyl hydrolases family 15 CVS48_11840 PF00990 GGDEF domain CVS48_11845 PF00072 Response regulator receiver domain CVS48_11850 PF03797 Autotransporter beta-domain CVS48_11850 PF12951 CVS48_11850 CVS48_11850 PF13018 CVS48_11850 CVS48_11855 PF00515 Tetratricopeptide repeat CVS48_11855 PF13181 Tetratricopeptide repeat CVS48_11855 PF13374 Tetratricopeptide repeat CVS48_11855 PF13432 Tetratricopeptide repeat CVS48_11860 PF00884 Sulfatase CVS48_11860 PF14707 C-terminal region of aryl-sulfatase CVS48_11865 PF13515 CVS48_11865 CVS48_11880 PF10081 CVS48_11880 CVS48_11880 PF15420 CVS48_11880 CVS48_11885 PF00596 Class II Aldolase and Adducin N-terminal domain CVS48_11890 PF04264 YceI-like domain CVS48_11895 PF01381 Helix-turn-helix CVS48_11900 PF07804 HipA-like C-terminal domain CVS48_11900 PF13657 HipA N-terminal domain CVS48_11905 PF08327 Activator of Hsp90 ATPase homolog 1-like protein CVS48_11910 PF01494 FAD binding domain CVS48_11915 PF09351 Domain of unknown function (DUF1993) CVS48_11920 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CVS48_11920 PF09130 Domain of unknown function (DUF1932) CVS48_11925 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_11930 PF03737 Demethylmenaquinone methyltransferase CVS48_11940 PF00392 Bacterial regulatory proteins, gntR family CVS48_11940 PF07729 FCD domain CVS48_11945 PF00512 His Kinase A (phospho-acceptor) domain CVS48_11945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_11945 PF08521 CVS48_11945 CVS48_11950 PF00072 Response regulator receiver domain CVS48_11950 PF00486 Transcriptional regulatory protein, C terminal CVS48_11955 PF06629 CVS48_11955 CVS48_11960 PF04261 Dyp-type peroxidase family CVS48_11970 PF00561 alpha/beta hydrolase fold CVS48_11980 PF00005 ABC transporter CVS48_11990 PF00248 Aldo/keto reductase family CVS48_11995 PF00149 Calcineurin-like phosphoesterase CVS48_12000 PF07007 Protein of unknown function (DUF1311) CVS48_12005 PF03352 Methyladenine glycosylase CVS48_12010 PF01593 Flavin containing amine oxidoreductase CVS48_12015 PF07103 CVS48_12015 CVS48_12020 PF00583 Acetyltransferase (GNAT) family CVS48_12020 PF12802 MarR family CVS48_12025 PF00805 Pentapeptide repeats (8 copies) CVS48_12025 PF13599 Pentapeptide repeats (9 copies) CVS48_12030 PF00072 Response regulator receiver domain CVS48_12030 PF00196 Bacterial regulatory proteins, luxR family CVS48_12035 PF00072 Response regulator receiver domain CVS48_12035 PF00512 His Kinase A (phospho-acceptor) domain CVS48_12035 PF01627 Hpt domain CVS48_12035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_12040 PF00072 Response regulator receiver domain CVS48_12040 PF00563 EAL domain CVS48_12045 PF00072 Response regulator receiver domain CVS48_12045 PF00512 His Kinase A (phospho-acceptor) domain CVS48_12045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_12060 PF08857 Putative ParB-like nuclease CVS48_12065 PF12796 Ankyrin repeats (3 copies) CVS48_12070 PF13609 Gram-negative porin CVS48_12080 PF00156 Phosphoribosyl transferase domain CVS48_12080 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CVS48_12085 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CVS48_12090 PF02104 CVS48_12090 CVS48_12095 PF03626 CVS48_12095 CVS48_12100 PF00510 Cytochrome c oxidase subunit III CVS48_12105 PF00115 Cytochrome C and Quinol oxidase polypeptide I CVS48_12110 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CVS48_12110 PF06481 COX Aromatic Rich Motif CVS48_12115 PF07690 Major Facilitator Superfamily CVS48_12120 PF00850 Histone deacetylase domain CVS48_12125 PF02698 DUF218 domain CVS48_12150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_12150 PF03466 LysR substrate binding domain CVS48_12155 PF03741 CVS48_12155 CVS48_12160 PF13847 Methyltransferase domain CVS48_12165 PF12833 Helix-turn-helix domain CVS48_12170 PF07690 Major Facilitator Superfamily CVS48_12180 PF01447 Thermolysin metallopeptidase, catalytic domain CVS48_12180 PF02868 Thermolysin metallopeptidase, alpha-helical domain CVS48_12185 PF01145 SPFH domain / Band 7 family CVS48_12195 PF04542 Sigma-70 region 2 CVS48_12195 PF08281 Sigma-70, region 4 CVS48_12200 PF04773 FecR protein CVS48_12200 PF16220 CVS48_12200 CVS48_12200 PF16344 CVS48_12200 CVS48_12205 PF00593 TonB dependent receptor CVS48_12205 PF07660 Secretin and TonB N terminus short domain CVS48_12205 PF07715 TonB-dependent Receptor Plug Domain CVS48_12215 PF04542 Sigma-70 region 2 CVS48_12215 PF08281 Sigma-70, region 4 CVS48_12220 PF04773 FecR protein CVS48_12220 PF16220 CVS48_12220 CVS48_12225 PF00593 TonB dependent receptor CVS48_12225 PF07660 Secretin and TonB N terminus short domain CVS48_12225 PF07715 TonB-dependent Receptor Plug Domain CVS48_12230 PF00072 Response regulator receiver domain CVS48_12230 PF00512 His Kinase A (phospho-acceptor) domain CVS48_12230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_12230 PF08448 PAS fold CVS48_12235 PF04542 Sigma-70 region 2 CVS48_12235 PF08281 Sigma-70, region 4 CVS48_12240 PF04773 FecR protein CVS48_12240 PF16220 CVS48_12240 CVS48_12245 PF00593 TonB dependent receptor CVS48_12245 PF07715 TonB-dependent Receptor Plug Domain CVS48_12250 PF10282 Lactonase, 7-bladed beta-propeller CVS48_12255 PF00392 Bacterial regulatory proteins, gntR family CVS48_12255 PF07729 FCD domain CVS48_12260 PF00330 Aconitase family (aconitate hydratase) CVS48_12260 PF00694 Aconitase C-terminal domain CVS48_12265 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_12270 PF09859 CVS48_12270 CVS48_12275 PF13419 Haloacid dehalogenase-like hydrolase CVS48_12280 PF00106 short chain dehydrogenase CVS48_12285 PF02308 CVS48_12285 CVS48_12290 PF13561 Enoyl-(Acyl carrier protein) reductase CVS48_12295 PF07883 Cupin domain CVS48_12305 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CVS48_12310 PF13532 2OG-Fe(II) oxygenase superfamily CVS48_12315 PF09859 CVS48_12315 CVS48_12320 PF13091 PLD-like domain CVS48_12325 PF13560 Helix-turn-helix domain CVS48_12330 PF13673 Acetyltransferase (GNAT) domain CVS48_12340 PF12697 Alpha/beta hydrolase family CVS48_12345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_12345 PF03466 LysR substrate binding domain CVS48_12350 PF00106 short chain dehydrogenase CVS48_12360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_12360 PF03466 LysR substrate binding domain CVS48_12365 PF01554 MatE CVS48_12370 PF13463 Winged helix DNA-binding domain CVS48_12375 PF00892 EamA-like transporter family CVS48_12380 PF02311 AraC-like ligand binding domain CVS48_12380 PF12833 Helix-turn-helix domain CVS48_12385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_12385 PF03466 LysR substrate binding domain CVS48_12390 PF00390 Malic enzyme, N-terminal domain CVS48_12390 PF01515 Phosphate acetyl/butaryl transferase CVS48_12390 PF03949 Malic enzyme, NAD binding domain CVS48_12395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_12395 PF03466 LysR substrate binding domain CVS48_12400 PF01546 Peptidase family M20/M25/M40 CVS48_12400 PF07687 Peptidase dimerisation domain CVS48_12415 PF13663 CVS48_12415 CVS48_12420 PF04102 SlyX CVS48_12425 PF00593 TonB dependent receptor CVS48_12425 PF07715 TonB-dependent Receptor Plug Domain CVS48_12430 PF04891 CVS48_12430 CVS48_12435 PF13637 Ankyrin repeats (many copies) CVS48_12440 PF03626 CVS48_12440 CVS48_12445 PF00510 Cytochrome c oxidase subunit III CVS48_12450 PF00115 Cytochrome C and Quinol oxidase polypeptide I CVS48_12455 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CVS48_12455 PF06481 COX Aromatic Rich Motif CVS48_12460 PF00072 Response regulator receiver domain CVS48_12460 PF02954 Bacterial regulatory protein, Fis family CVS48_12465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_12470 PF04314 Protein of unknown function (DUF461) CVS48_12475 PF02630 SCO1/SenC CVS48_12480 PF11162 CVS48_12480 CVS48_12485 PF01476 LysM domain CVS48_12485 PF01551 Peptidase family M23 CVS48_12490 PF00005 ABC transporter CVS48_12495 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_12500 PF00497 Bacterial extracellular solute-binding proteins, family 3 CVS48_12505 PF03576 Peptidase family S58 CVS48_12510 PF03006 CVS48_12510 CVS48_12515 PF01037 AsnC family CVS48_12515 PF13412 Winged helix-turn-helix DNA-binding CVS48_12520 PF00266 Aminotransferase class-V CVS48_12525 PF00324 Amino acid permease CVS48_12530 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CVS48_12535 PF08279 HTH domain CVS48_12535 PF13280 CVS48_12535 CVS48_12545 PF05425 CVS48_12545 CVS48_12550 PF04542 Sigma-70 region 2 CVS48_12550 PF08281 Sigma-70, region 4 CVS48_12555 PF04773 FecR protein CVS48_12555 PF16220 CVS48_12555 CVS48_12560 PF00593 TonB dependent receptor CVS48_12560 PF07715 TonB-dependent Receptor Plug Domain CVS48_12565 PF05171 Haemin-degrading HemS CVS48_12570 PF01497 Periplasmic binding protein CVS48_12575 PF01032 FecCD transport family CVS48_12580 PF00005 ABC transporter CVS48_12585 PF04461 Protein of unknown function (DUF520) CVS48_12590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_12590 PF03466 LysR substrate binding domain CVS48_12595 PF00730 HhH-GPD superfamily base excision DNA repair protein CVS48_12595 PF06029 AlkA N-terminal domain CVS48_12600 PF12889 Protein of unknown function (DUF3829) CVS48_12605 PF00180 Isocitrate/isopropylmalate dehydrogenase CVS48_12610 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_12615 PF01569 PAP2 superfamily CVS48_12620 PF03929 CVS48_12620 CVS48_12625 PF00593 TonB dependent receptor CVS48_12625 PF07715 TonB-dependent Receptor Plug Domain CVS48_12630 PF11162 CVS48_12630 CVS48_12635 PF00005 ABC transporter CVS48_12640 PF00005 ABC transporter CVS48_12640 PF12399 Branched-chain amino acid ATP-binding cassette transporter CVS48_12645 PF02653 CVS48_12645 CVS48_12650 PF02653 CVS48_12650 CVS48_12655 PF13433 Periplasmic binding protein domain CVS48_12660 PF01425 Amidase CVS48_12665 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain CVS48_12665 PF00364 Biotin-requiring enzyme CVS48_12665 PF02626 Allophanate hydrolase subunit 2 CVS48_12665 PF02682 Allophanate hydrolase subunit 1 CVS48_12665 PF02785 Biotin carboxylase C-terminal domain CVS48_12665 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CVS48_12670 PF00392 Bacterial regulatory proteins, gntR family CVS48_12670 PF07729 FCD domain CVS48_12675 PF00872 CVS48_12675 CVS48_12685 PF04542 Sigma-70 region 2 CVS48_12685 PF08281 Sigma-70, region 4 CVS48_12690 PF03640 CVS48_12690 CVS48_12695 PF00583 Acetyltransferase (GNAT) family CVS48_12700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_12700 PF03466 LysR substrate binding domain CVS48_12705 PF04303 PrpF protein CVS48_12710 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_12715 PF01797 Transposase IS200 like CVS48_12720 PF07394 CVS48_12720 CVS48_12725 PF08811 CVS48_12725 CVS48_12730 PF13561 Enoyl-(Acyl carrier protein) reductase CVS48_12735 PF00127 Copper binding proteins, plastocyanin/azurin family CVS48_12740 PF07995 Glucose / Sorbosone dehydrogenase CVS48_12745 PF13670 CVS48_12745 CVS48_12750 PF03413 Peptidase propeptide and YPEB domain CVS48_12755 PF00072 Response regulator receiver domain CVS48_12755 PF00486 Transcriptional regulatory protein, C terminal CVS48_12760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_12765 PF00582 Universal stress protein family CVS48_12770 PF00582 Universal stress protein family CVS48_12775 PF01177 Asp/Glu/Hydantoin racemase CVS48_12780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_12780 PF03466 LysR substrate binding domain CVS48_12785 PF02417 CVS48_12785 CVS48_12790 PF02417 CVS48_12790 CVS48_12795 PF07077 CVS48_12795 CVS48_12800 PF05175 Methyltransferase small domain CVS48_12805 PF07690 Major Facilitator Superfamily CVS48_12810 PF11390 CVS48_12810 CVS48_12815 PF02634 FdhD/NarQ family CVS48_12820 PF00037 4Fe-4S binding domain CVS48_12820 PF00384 Molybdopterin oxidoreductase CVS48_12820 PF01568 Molydopterin dinucleotide binding domain CVS48_12820 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CVS48_12820 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CVS48_12820 PF13510 2Fe-2S iron-sulfur cluster binding domain CVS48_12825 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CVS48_12825 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CVS48_12835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_12835 PF12727 PBP superfamily domain CVS48_12840 PF04055 Radical SAM superfamily CVS48_12840 PF06463 Molybdenum Cofactor Synthesis C CVS48_12840 PF13394 4Fe-4S single cluster domain CVS48_12845 PF12804 MobA-like NTP transferase domain CVS48_12850 PF00994 Probable molybdopterin binding domain CVS48_12850 PF03453 MoeA N-terminal region (domain I and II) CVS48_12850 PF03454 MoeA C-terminal region (domain IV) CVS48_12855 PF00994 Probable molybdopterin binding domain CVS48_12860 PF02391 MoaE protein CVS48_12865 PF02597 ThiS family CVS48_12870 PF01967 MoaC family CVS48_12875 PF05359 CVS48_12875 CVS48_12880 PF01738 Dienelactone hydrolase family CVS48_12890 PF08534 Redoxin CVS48_12895 PF07690 Major Facilitator Superfamily CVS48_12905 PF04055 Radical SAM superfamily CVS48_12905 PF06968 Biotin and Thiamin Synthesis associated domain CVS48_12910 PF00196 Bacterial regulatory proteins, luxR family CVS48_12910 PF13188 PAS domain CVS48_12910 PF13426 PAS domain CVS48_12945 PF00248 Aldo/keto reductase family CVS48_12950 PF00795 Carbon-nitrogen hydrolase CVS48_12955 PF00571 CBS domain CVS48_12955 PF03471 Transporter associated domain CVS48_12960 PF02130 Uncharacterized protein family UPF0054 CVS48_12965 PF02562 PhoH-like protein CVS48_12970 PF00919 Uncharacterized protein family UPF0004 CVS48_12970 PF01938 TRAM domain CVS48_12970 PF04055 Radical SAM superfamily CVS48_12975 PF01569 PAP2 superfamily CVS48_12985 PF01411 tRNA synthetases class II (A) CVS48_12985 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CVS48_12990 PF13468 Glyoxalase-like domain CVS48_12995 PF02355 Protein export membrane protein CVS48_12995 PF07549 SecD/SecF GG Motif CVS48_13000 PF02355 Protein export membrane protein CVS48_13000 PF07549 SecD/SecF GG Motif CVS48_13000 PF13721 SecD export protein N-terminal TM region CVS48_13005 PF02699 Preprotein translocase subunit CVS48_13010 PF01702 Queuine tRNA-ribosyltransferase CVS48_13015 PF02547 Queuosine biosynthesis protein CVS48_13020 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CVS48_13025 PF14681 Uracil phosphoribosyltransferase CVS48_13030 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CVS48_13030 PF10414 Sirohaem synthase dimerisation region CVS48_13030 PF13241 Putative NAD(P)-binding CVS48_13030 PF14824 Sirohaem biosynthesis protein central CVS48_13035 PF00072 Response regulator receiver domain CVS48_13035 PF03861 ANTAR domain CVS48_13040 PF13379 NMT1-like family CVS48_13045 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_13050 PF00005 ABC transporter CVS48_13055 PF07992 Pyridine nucleotide-disulphide oxidoreductase CVS48_13060 PF00384 Molybdopterin oxidoreductase CVS48_13060 PF01568 Molydopterin dinucleotide binding domain CVS48_13060 PF04324 BFD-like [2Fe-2S] binding domain CVS48_13060 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CVS48_13070 PF05957 CVS48_13070 CVS48_13075 PF07332 CVS48_13075 CVS48_13085 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CVS48_13090 PF01464 Transglycosylase SLT domain CVS48_13095 PF00155 Aminotransferase class I and II CVS48_13105 PF00390 Malic enzyme, N-terminal domain CVS48_13105 PF01515 Phosphate acetyl/butaryl transferase CVS48_13105 PF03949 Malic enzyme, NAD binding domain CVS48_13110 PF01734 Patatin-like phospholipase CVS48_13115 PF01337 Barstar (barnase inhibitor) CVS48_13120 PF04452 RNA methyltransferase CVS48_13130 PF00456 Transketolase, thiamine diphosphate binding domain CVS48_13130 PF02779 Transketolase, pyrimidine binding domain CVS48_13130 PF02780 Transketolase, C-terminal domain CVS48_13135 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CVS48_13135 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CVS48_13140 PF00162 Phosphoglycerate kinase CVS48_13145 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_13150 PF00916 CVS48_13150 CVS48_13150 PF01740 STAS domain CVS48_13155 PF13561 Enoyl-(Acyl carrier protein) reductase CVS48_13160 PF00871 Acetokinase family CVS48_13165 PF01515 Phosphate acetyl/butaryl transferase CVS48_13170 PF11339 CVS48_13170 CVS48_13175 PF13417 Glutathione S-transferase, N-terminal domain CVS48_13175 PF14834 Glutathione S-transferase, C-terminal domain CVS48_13185 PF00226 DnaJ domain CVS48_13185 PF01556 DnaJ C terminal domain CVS48_13190 PF13591 MerR HTH family regulatory protein CVS48_13195 PF02798 Glutathione S-transferase, N-terminal domain CVS48_13195 PF13410 Glutathione S-transferase, C-terminal domain CVS48_13200 PF01323 DSBA-like thioredoxin domain CVS48_13205 PF01384 CVS48_13205 CVS48_13210 PF04914 DltD C-terminal region CVS48_13215 PF00994 Probable molybdopterin binding domain CVS48_13225 PF01551 Peptidase family M23 CVS48_13235 PF01176 Translation initiation factor 1A / IF-1 CVS48_13240 PF04828 Glutathione-dependent formaldehyde-activating enzyme CVS48_13250 PF00005 ABC transporter CVS48_13255 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein CVS48_13260 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_13270 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_13275 PF01019 Gamma-glutamyltranspeptidase CVS48_13280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_13280 PF03466 LysR substrate binding domain CVS48_13290 PF06299 CVS48_13290 CVS48_13295 PF01979 Amidohydrolase family CVS48_13300 PF00392 Bacterial regulatory proteins, gntR family CVS48_13300 PF07702 UTRA domain CVS48_13305 PF06754 CVS48_13305 CVS48_13310 PF05845 Bacterial phosphonate metabolism protein (PhnH) CVS48_13315 PF05861 CVS48_13315 CVS48_13320 PF06007 CVS48_13320 CVS48_13325 PF00005 ABC transporter CVS48_13330 PF00005 ABC transporter CVS48_13335 PF01979 Amidohydrolase family CVS48_13340 PF03473 MOSC domain CVS48_13350 PF00375 Sodium:dicarboxylate symporter family CVS48_13355 PF08450 SMP-30/Gluconolaconase/LRE-like region CVS48_13360 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CVS48_13365 PF01614 Bacterial transcriptional regulator CVS48_13365 PF09339 IclR helix-turn-helix domain CVS48_13370 PF01546 Peptidase family M20/M25/M40 CVS48_13370 PF07687 Peptidase dimerisation domain CVS48_13375 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CVS48_13380 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_13385 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_13385 PF12911 CVS48_13385 CVS48_13390 PF00005 ABC transporter CVS48_13390 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS48_13395 PF01425 Amidase CVS48_13400 PF01116 Fructose-bisphosphate aldolase class-II CVS48_13405 PF04828 Glutathione-dependent formaldehyde-activating enzyme CVS48_13410 PF01259 SAICAR synthetase CVS48_13415 PF02600 Disulfide bond formation protein DsbB CVS48_13420 PF00731 AIR carboxylase CVS48_13425 PF02222 ATP-grasp domain CVS48_13430 PF01300 Telomere recombination CVS48_13430 PF03481 Putative GTP-binding controlling metal-binding CVS48_13435 PF01614 Bacterial transcriptional regulator CVS48_13435 PF09339 IclR helix-turn-helix domain CVS48_13440 PF01144 Coenzyme A transferase CVS48_13445 PF01144 Coenzyme A transferase CVS48_13450 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_13455 PF00497 Bacterial extracellular solute-binding proteins, family 3 CVS48_13460 PF01614 Bacterial transcriptional regulator CVS48_13460 PF09339 IclR helix-turn-helix domain CVS48_13465 PF00491 Arginase family CVS48_13470 PF00497 Bacterial extracellular solute-binding proteins, family 3 CVS48_13475 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_13480 PF00005 ABC transporter CVS48_13485 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CVS48_13485 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CVS48_13490 PF00005 ABC transporter CVS48_13495 PF00005 ABC transporter CVS48_13495 PF12399 Branched-chain amino acid ATP-binding cassette transporter CVS48_13500 PF02653 CVS48_13500 CVS48_13505 PF02653 CVS48_13505 CVS48_13510 PF13458 Periplasmic binding protein CVS48_13515 PF00501 AMP-binding enzyme CVS48_13515 PF13193 AMP-binding enzyme C-terminal domain CVS48_13520 PF16155 CVS48_13520 CVS48_13525 PF01202 Shikimate kinase CVS48_13525 PF01381 Helix-turn-helix CVS48_13530 PF00378 Enoyl-CoA hydratase/isomerase family CVS48_13540 PF00037 4Fe-4S binding domain CVS48_13540 PF00175 Oxidoreductase NAD-binding domain CVS48_13540 PF00970 Oxidoreductase FAD-binding domain CVS48_13545 PF01575 MaoC like domain CVS48_13550 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CVS48_13550 PF02770 Acyl-CoA dehydrogenase, middle domain CVS48_13550 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CVS48_13555 PF00205 Thiamine pyrophosphate enzyme, central domain CVS48_13555 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CVS48_13555 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CVS48_13560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_13560 PF03466 LysR substrate binding domain CVS48_13565 PF00589 Phage integrase family CVS48_13565 PF02899 Phage integrase, N-terminal SAM-like domain CVS48_13570 PF04073 Aminoacyl-tRNA editing domain CVS48_13575 PF00392 Bacterial regulatory proteins, gntR family CVS48_13575 PF07729 FCD domain CVS48_13580 PF02830 V4R domain CVS48_13585 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CVS48_13590 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_13595 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_13600 PF00005 ABC transporter CVS48_13600 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS48_13605 PF00355 Rieske [2Fe-2S] domain CVS48_13605 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CVS48_13610 PF00866 Ring hydroxylating beta subunit CVS48_13615 PF08240 Alcohol dehydrogenase GroES-like domain CVS48_13615 PF13602 Zinc-binding dehydrogenase CVS48_13620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_13620 PF03466 LysR substrate binding domain CVS48_13625 PF00701 Dihydrodipicolinate synthetase family CVS48_13630 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_13635 PF13561 Enoyl-(Acyl carrier protein) reductase CVS48_13640 PF01965 DJ-1/PfpI family CVS48_13645 PF00107 Zinc-binding dehydrogenase CVS48_13645 PF08240 Alcohol dehydrogenase GroES-like domain CVS48_13650 PF13467 Ribbon-helix-helix domain CVS48_13655 PF00768 D-alanyl-D-alanine carboxypeptidase CVS48_13665 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system CVS48_13670 PF05016 Plasmid stabilisation system protein CVS48_13680 PF00072 Response regulator receiver domain CVS48_13680 PF00512 His Kinase A (phospho-acceptor) domain CVS48_13680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_13680 PF12860 CVS48_13680 CVS48_13685 PF00072 Response regulator receiver domain CVS48_13685 PF00196 Bacterial regulatory proteins, luxR family CVS48_13690 PF00501 AMP-binding enzyme CVS48_13690 PF13193 AMP-binding enzyme C-terminal domain CVS48_13690 PF16177 CVS48_13690 CVS48_13695 PF00474 Sodium:solute symporter family CVS48_13700 PF04341 CVS48_13700 CVS48_13705 PF07690 Major Facilitator Superfamily CVS48_13710 PF12705 PD-(D/E)XK nuclease superfamily CVS48_13715 PF00580 UvrD/REP helicase N-terminal domain CVS48_13715 PF12705 PD-(D/E)XK nuclease superfamily CVS48_13715 PF13361 UvrD-like helicase C-terminal domain CVS48_13725 PF12169 DNA polymerase III subunits gamma and tau domain III CVS48_13725 PF12170 DNA polymerase III tau subunit V interacting with alpha CVS48_13725 PF13177 DNA polymerase III, delta subunit CVS48_13730 PF02575 YbaB/EbfC DNA-binding family CVS48_13735 PF02132 RecR protein CVS48_13735 PF13662 Toprim domain CVS48_13740 PF02515 CoA-transferase family III CVS48_13745 PF13379 NMT1-like family CVS48_13750 PF00005 ABC transporter CVS48_13755 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_13760 PF01126 Heme oxygenase CVS48_13770 PF00072 Response regulator receiver domain CVS48_13775 PF00360 Phytochrome region CVS48_13775 PF00512 His Kinase A (phospho-acceptor) domain CVS48_13775 PF01590 GAF domain CVS48_13775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_13775 PF08446 PAS fold CVS48_13780 PF02627 Carboxymuconolactone decarboxylase family CVS48_13785 PF00923 Transaldolase CVS48_13790 PF00117 Glutamine amidotransferase class-I CVS48_13790 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CVS48_13795 PF02142 MGS-like domain CVS48_13795 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CVS48_13795 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CVS48_13800 PF00106 short chain dehydrogenase CVS48_13805 PF00300 Histidine phosphatase superfamily (branch 1) CVS48_13810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_13810 PF03466 LysR substrate binding domain CVS48_13815 PF00005 ABC transporter CVS48_13815 PF08402 TOBE domain CVS48_13820 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_13825 PF13343 Bacterial extracellular solute-binding protein CVS48_13830 PF14282 CVS48_13830 CVS48_13835 PF00860 Permease family CVS48_13840 PF01272 Transcription elongation factor, GreA/GreB, C-term CVS48_13840 PF03449 Transcription elongation factor, N-terminal CVS48_13845 PF01985 CRS1 / YhbY (CRM) domain CVS48_13850 PF01728 FtsJ-like methyltransferase CVS48_13855 PF00004 ATPase family associated with various cellular activities (AAA) CVS48_13855 PF01434 Peptidase family M41 CVS48_13855 PF06480 FtsH Extracellular CVS48_13860 PF00809 Pterin binding enzyme CVS48_13865 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CVS48_13865 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CVS48_13865 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CVS48_13865 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CVS48_13870 PF13444 Acetyltransferase (GNAT) domain CVS48_13875 PF02541 Ppx/GppA phosphatase family CVS48_13880 PF02503 Polyphosphate kinase middle domain CVS48_13880 PF13089 Polyphosphate kinase N-terminal domain CVS48_13880 PF13090 Polyphosphate kinase C-terminal domain CVS48_13885 PF12849 PBP superfamily domain CVS48_13890 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_13895 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_13900 PF00005 ABC transporter CVS48_13910 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_13915 PF00682 HMGL-like CVS48_13920 PF02515 CoA-transferase family III CVS48_13925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_13925 PF03466 LysR substrate binding domain CVS48_13930 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CVS48_13930 PF13378 Enolase C-terminal domain-like CVS48_13935 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CVS48_13935 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CVS48_13940 PF02798 Glutathione S-transferase, N-terminal domain CVS48_13940 PF14497 Glutathione S-transferase, C-terminal domain CVS48_13945 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_13950 PF13561 Enoyl-(Acyl carrier protein) reductase CVS48_13955 PF00392 Bacterial regulatory proteins, gntR family CVS48_13955 PF07729 FCD domain CVS48_13965 PF03713 Domain of unknown function (DUF305) CVS48_13970 PF10027 CVS48_13970 CVS48_13975 PF13460 NADH(P)-binding CVS48_13975 PF13781 CVS48_13975 CVS48_13985 PF05974 Domain of unknown function (DUF892) CVS48_13990 PF13628 CVS48_13990 CVS48_13995 PF00107 Zinc-binding dehydrogenase CVS48_13995 PF08240 Alcohol dehydrogenase GroES-like domain CVS48_13995 PF13823 Alcohol dehydrogenase GroES-associated CVS48_14000 PF01223 DNA/RNA non-specific endonuclease CVS48_14005 PF01810 CVS48_14005 CVS48_14010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_14010 PF03466 LysR substrate binding domain CVS48_14015 PF00682 HMGL-like CVS48_14020 PF02515 CoA-transferase family III CVS48_14025 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_14030 PF04325 Protein of unknown function (DUF465) CVS48_14035 PF04116 CVS48_14035 CVS48_14040 PF10099 CVS48_14040 CVS48_14045 PF04542 Sigma-70 region 2 CVS48_14045 PF08281 Sigma-70, region 4 CVS48_14050 PF11937 CVS48_14050 CVS48_14055 PF00857 Isochorismatase family CVS48_14060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_14060 PF03466 LysR substrate binding domain CVS48_14065 PF06719 CVS48_14065 CVS48_14065 PF12833 Helix-turn-helix domain CVS48_14070 PF00248 Aldo/keto reductase family CVS48_14080 PF06912 CVS48_14080 CVS48_14090 PF13432 Tetratricopeptide repeat CVS48_14090 PF14559 Tetratricopeptide repeat CVS48_14095 PF02469 Fasciclin domain CVS48_14100 PF10099 CVS48_14100 CVS48_14105 PF04542 Sigma-70 region 2 CVS48_14105 PF08281 Sigma-70, region 4 CVS48_14110 PF05724 Thiopurine S-methyltransferase (TPMT) CVS48_14115 PF13561 Enoyl-(Acyl carrier protein) reductase CVS48_14120 PF00107 Zinc-binding dehydrogenase CVS48_14120 PF08240 Alcohol dehydrogenase GroES-like domain CVS48_14125 PF00005 ABC transporter CVS48_14130 PF00005 ABC transporter CVS48_14130 PF02653 CVS48_14130 CVS48_14130 PF12399 Branched-chain amino acid ATP-binding cassette transporter CVS48_14135 PF02653 CVS48_14135 CVS48_14140 PF13458 Periplasmic binding protein CVS48_14145 PF13561 Enoyl-(Acyl carrier protein) reductase CVS48_14150 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CVS48_14150 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CVS48_14155 PF05853 Prokaryotic protein of unknown function (DUF849) CVS48_14160 PF00465 Iron-containing alcohol dehydrogenase CVS48_14165 PF00392 Bacterial regulatory proteins, gntR family CVS48_14165 PF07729 FCD domain CVS48_14170 PF00456 Transketolase, thiamine diphosphate binding domain CVS48_14175 PF02779 Transketolase, pyrimidine binding domain CVS48_14175 PF02780 Transketolase, C-terminal domain CVS48_14180 PF01488 Shikimate / quinate 5-dehydrogenase CVS48_14180 PF08501 Shikimate dehydrogenase substrate binding domain CVS48_14185 PF00732 GMC oxidoreductase CVS48_14185 PF05199 GMC oxidoreductase CVS48_14190 PF05544 Proline racemase CVS48_14195 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_14200 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_14210 PF13416 Bacterial extracellular solute-binding protein CVS48_14215 PF01965 DJ-1/PfpI family CVS48_14215 PF12833 Helix-turn-helix domain CVS48_14220 PF14497 Glutathione S-transferase, C-terminal domain CVS48_14225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CVS48_14225 PF08447 PAS fold CVS48_14230 PF07866 Protein of unknown function (DUF1653) CVS48_14235 PF00929 Exonuclease CVS48_14240 PF03992 Antibiotic biosynthesis monooxygenase CVS48_14260 PF00924 Mechanosensitive ion channel CVS48_14260 PF12607 CVS48_14260 CVS48_14265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_14265 PF03466 LysR substrate binding domain CVS48_14270 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CVS48_14270 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CVS48_14305 PF00072 Response regulator receiver domain CVS48_14305 PF00158 Sigma-54 interaction domain CVS48_14305 PF02954 Bacterial regulatory protein, Fis family CVS48_14310 PF00512 His Kinase A (phospho-acceptor) domain CVS48_14310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_14315 PF00375 Sodium:dicarboxylate symporter family CVS48_14320 PF02545 Maf-like protein CVS48_14325 PF02590 Predicted SPOUT methyltransferase CVS48_14330 PF02410 Oligomerisation domain CVS48_14335 PF01467 Cytidylyltransferase CVS48_14340 PF01218 Coproporphyrinogen III oxidase CVS48_14345 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CVS48_14345 PF02843 Phosphoribosylglycinamide synthetase, C domain CVS48_14345 PF02844 Phosphoribosylglycinamide synthetase, N domain CVS48_14350 PF01709 Transcriptional regulator CVS48_14355 PF05872 CVS48_14355 CVS48_14360 PF00180 Isocitrate/isopropylmalate dehydrogenase CVS48_14370 PF07690 Major Facilitator Superfamily CVS48_14375 PF00529 HlyD family secretion protein CVS48_14375 PF16576 CVS48_14375 CVS48_14380 PF02321 Outer membrane efflux protein CVS48_14385 PF12802 MarR family CVS48_14390 PF00892 EamA-like transporter family CVS48_14395 PF00892 EamA-like transporter family CVS48_14400 PF00107 Zinc-binding dehydrogenase CVS48_14400 PF08240 Alcohol dehydrogenase GroES-like domain CVS48_14405 PF00171 Aldehyde dehydrogenase family CVS48_14410 PF13557 CVS48_14410 CVS48_14415 PF06433 Methylamine dehydrogenase heavy chain (MADH) CVS48_14420 PF07291 CVS48_14420 CVS48_14425 PF13098 Thioredoxin-like domain CVS48_14430 PF02975 Methylamine dehydrogenase, L chain CVS48_14440 PF12833 Helix-turn-helix domain CVS48_14440 PF14525 CVS48_14440 CVS48_14445 PF02677 CVS48_14445 CVS48_14450 PF03710 Glutamate-ammonia ligase adenylyltransferase CVS48_14450 PF08335 GlnD PII-uridylyltransferase CVS48_14455 PF13116 CVS48_14455 CVS48_14455 PF13502 CVS48_14455 CVS48_14460 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CVS48_14460 PF07497 Rho termination factor, RNA-binding domain CVS48_14460 PF07498 Rho termination factor, N-terminal domain CVS48_14465 PF00085 Thioredoxin CVS48_14470 PF00204 DNA gyrase B CVS48_14470 PF00986 DNA gyrase B subunit, carboxyl terminus CVS48_14470 PF01751 Toprim domain CVS48_14470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_14475 PF14317 CVS48_14475 CVS48_14480 PF00521 DNA gyrase/topoisomerase IV, subunit A CVS48_14485 PF04235 CVS48_14485 CVS48_14490 PF06808 CVS48_14490 CVS48_14490 PF11874 CVS48_14490 CVS48_14495 PF16868 CVS48_14495 CVS48_14500 PF00202 Aminotransferase class-III CVS48_14505 PF01380 SIS domain CVS48_14510 PF01047 MarR family CVS48_14515 PF00583 Acetyltransferase (GNAT) family CVS48_14520 PF00202 Aminotransferase class-III CVS48_14525 PF06339 CVS48_14525 CVS48_14530 PF05721 Phytanoyl-CoA dioxygenase (PhyH) CVS48_14535 PF03473 MOSC domain CVS48_14535 PF03476 MOSC N-terminal beta barrel domain CVS48_14540 PF00893 Small Multidrug Resistance protein CVS48_14545 PF02261 Aspartate decarboxylase CVS48_14550 PF00111 2Fe-2S iron-sulfur cluster binding domain CVS48_14550 PF00175 Oxidoreductase NAD-binding domain CVS48_14550 PF00970 Oxidoreductase FAD-binding domain CVS48_14555 PF01266 FAD dependent oxidoreductase CVS48_14560 PF13416 Bacterial extracellular solute-binding protein CVS48_14565 PF03524 Conjugal transfer protein CVS48_14565 PF10671 Toxin co-regulated pilus biosynthesis protein Q CVS48_14585 PF00437 Type II/IV secretion system protein CVS48_14600 PF07963 Prokaryotic N-terminal methylation motif CVS48_14600 PF08805 PilS N terminal CVS48_14610 PF01411 tRNA synthetases class II (A) CVS48_14610 PF02272 DHHA1 domain CVS48_14610 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CVS48_14615 PF01206 Sulfurtransferase TusA CVS48_14630 PF00886 Ribosomal protein S16 CVS48_14635 PF01782 RimM N-terminal domain CVS48_14640 PF01746 tRNA (Guanine-1)-methyltransferase CVS48_14645 PF01381 Helix-turn-helix CVS48_14645 PF07883 Cupin domain CVS48_14650 PF00497 Bacterial extracellular solute-binding proteins, family 3 CVS48_14655 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_14660 PF00005 ABC transporter CVS48_14665 PF01266 FAD dependent oxidoreductase CVS48_14675 PF00133 tRNA synthetases class I (I, L, M and V) CVS48_14675 PF08264 Anticodon-binding domain of tRNA CVS48_14675 PF10458 Valyl tRNA synthetase tRNA binding arm CVS48_14680 PF00334 Nucleoside diphosphate kinase CVS48_14685 PF04055 Radical SAM superfamily CVS48_14690 PF13413 Helix-turn-helix domain CVS48_14695 PF04551 GcpE protein CVS48_14700 PF03129 Anticodon binding domain CVS48_14700 PF13393 Histidyl-tRNA synthetase CVS48_14705 PF09976 Tetratricopeptide repeat CVS48_14710 PF13360 PQQ-like domain CVS48_14715 PF01926 50S ribosome-binding GTPase CVS48_14715 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CVS48_14720 PF00155 Aminotransferase class I and II CVS48_14725 PF17209 CVS48_14725 CVS48_14730 PF01926 50S ribosome-binding GTPase CVS48_14730 PF13167 CVS48_14730 CVS48_14730 PF16360 CVS48_14730 CVS48_14735 PF01145 SPFH domain / Band 7 family CVS48_14735 PF12221 CVS48_14735 CVS48_14740 PF01145 SPFH domain / Band 7 family CVS48_14745 PF13393 Histidyl-tRNA synthetase CVS48_14750 PF00709 Adenylosuccinate synthetase CVS48_14755 PF00156 Phosphoribosyl transferase domain CVS48_14760 PF01165 Ribosomal protein S21 CVS48_14765 PF01807 CHC2 zinc finger CVS48_14765 PF08275 DNA primase catalytic core, N-terminal domain CVS48_14765 PF08278 DNA primase DnaG DnaB-binding CVS48_14765 PF10410 DnaB-helicase binding domain of primase CVS48_14765 PF13662 Toprim domain CVS48_14770 PF00140 Sigma-70 factor, region 1 CVS48_14770 PF03979 Sigma-70 factor, region 1 CVS48_14770 PF04539 Sigma-70 region 3 CVS48_14770 PF04542 Sigma-70 region 2 CVS48_14770 PF04545 Sigma-70, region 4 CVS48_14770 PF04546 Sigma-70, non-essential region CVS48_14825 PF08666 SAF domain CVS48_14825 PF16976 CVS48_14825 CVS48_14830 PF00263 CVS48_14830 CVS48_14830 PF13629 CVS48_14830 CVS48_14835 PF00437 Type II/IV secretion system protein CVS48_14835 PF00498 FHA domain CVS48_14840 PF00482 Type II secretion system (T2SS), protein F CVS48_14845 PF00482 Type II secretion system (T2SS), protein F CVS48_14850 PF02643 Uncharacterized ACR, COG1430 CVS48_14855 PF01636 Phosphotransferase enzyme family CVS48_14860 PF01207 Dihydrouridine synthase (Dus) CVS48_14865 PF00571 CBS domain CVS48_14870 PF03631 CVS48_14870 CVS48_14875 PF09842 CVS48_14875 CVS48_14880 PF02696 CVS48_14880 CVS48_14885 PF00072 Response regulator receiver domain CVS48_14885 PF00486 Transcriptional regulatory protein, C terminal CVS48_14890 PF00512 His Kinase A (phospho-acceptor) domain CVS48_14890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_14895 PF00563 EAL domain CVS48_14895 PF00990 GGDEF domain CVS48_14895 PF16448 CVS48_14895 CVS48_14905 PF01264 Chorismate synthase CVS48_14910 PF01435 Peptidase family M48 CVS48_14915 PF00563 EAL domain CVS48_14915 PF00990 GGDEF domain CVS48_14915 PF16448 CVS48_14915 CVS48_14920 PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP CVS48_14930 PF00353 Hemolysin-type calcium-binding repeat (2 copies) CVS48_14930 PF05345 Putative Ig domain CVS48_14930 PF13519 von Willebrand factor type A domain CVS48_14935 PF00196 Bacterial regulatory proteins, luxR family CVS48_14940 PF13437 HlyD family secretion protein CVS48_14940 PF13533 Biotin-lipoyl like CVS48_14945 PF00005 ABC transporter CVS48_14945 PF00664 ABC transporter transmembrane region CVS48_14945 PF03412 Peptidase C39 family CVS48_14955 PF02321 Outer membrane efflux protein CVS48_14960 PF00330 Aconitase family (aconitate hydratase) CVS48_14965 PF00694 Aconitase C-terminal domain CVS48_14970 PF00180 Isocitrate/isopropylmalate dehydrogenase CVS48_14975 PF01118 Semialdehyde dehydrogenase, NAD binding domain CVS48_14975 PF02774 Semialdehyde dehydrogenase, dimerisation domain CVS48_14980 PF01476 LysM domain CVS48_14985 PF01416 tRNA pseudouridine synthase CVS48_14990 PF03480 Bacterial extracellular solute-binding protein, family 7 CVS48_14995 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CVS48_15005 PF00563 EAL domain CVS48_15005 PF12792 CVS48_15005 CVS48_15025 PF14559 Tetratricopeptide repeat CVS48_15030 PF04304 CVS48_15030 CVS48_15035 PF00920 Dehydratase family CVS48_15040 PF03480 Bacterial extracellular solute-binding protein, family 7 CVS48_15045 PF06808 CVS48_15045 CVS48_15050 PF04290 CVS48_15050 CVS48_15055 PF00356 Bacterial regulatory proteins, lacI family CVS48_15055 PF13377 Periplasmic binding protein-like domain CVS48_15060 PF00892 EamA-like transporter family CVS48_15065 PF00850 Histone deacetylase domain CVS48_15070 PF07883 Cupin domain CVS48_15075 PF00005 ABC transporter CVS48_15075 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS48_15080 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_15080 PF12911 CVS48_15080 CVS48_15085 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_15090 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CVS48_15095 PF01546 Peptidase family M20/M25/M40 CVS48_15095 PF07687 Peptidase dimerisation domain CVS48_15100 PF00392 Bacterial regulatory proteins, gntR family CVS48_15100 PF07729 FCD domain CVS48_15110 PF04055 Radical SAM superfamily CVS48_15110 PF06969 HemN C-terminal domain CVS48_15115 PF00072 Response regulator receiver domain CVS48_15115 PF00196 Bacterial regulatory proteins, luxR family CVS48_15120 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CVS48_15120 PF02824 TGS domain CVS48_15120 PF03129 Anticodon binding domain CVS48_15120 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CVS48_15125 PF00707 Translation initiation factor IF-3, C-terminal domain CVS48_15125 PF05198 Translation initiation factor IF-3, N-terminal domain CVS48_15130 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CVS48_15130 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CVS48_15135 PF03610 PTS system fructose IIA component CVS48_15140 PF00381 PTS HPr component phosphorylation site CVS48_15145 PF00391 PEP-utilising enzyme, mobile domain CVS48_15145 PF02896 PEP-utilising enzyme, TIM barrel domain CVS48_15145 PF05524 PEP-utilising enzyme, N-terminal CVS48_15150 PF00909 Ammonium Transporter Family CVS48_15155 PF00543 Nitrogen regulatory protein P-II CVS48_15160 PF04380 CVS48_15160 CVS48_15165 PF01078 Magnesium chelatase, subunit ChlI CVS48_15165 PF13335 CVS48_15165 CVS48_15165 PF13541 Subunit ChlI of Mg-chelatase CVS48_15170 PF01632 Ribosomal protein L35 CVS48_15175 PF00453 Ribosomal protein L20 CVS48_15180 PF01409 tRNA synthetases class II core domain (F) CVS48_15180 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CVS48_15185 PF01588 Putative tRNA binding domain CVS48_15185 PF03147 Ferredoxin-fold anticodon binding domain CVS48_15185 PF03483 B3/4 domain CVS48_15185 PF03484 tRNA synthetase B5 domain CVS48_15190 PF00216 Bacterial DNA-binding protein CVS48_15195 PF13411 MerR HTH family regulatory protein CVS48_15215 PF12697 Alpha/beta hydrolase family CVS48_15225 PF02567 Phenazine biosynthesis-like protein CVS48_15230 PF00583 Acetyltransferase (GNAT) family CVS48_15235 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family CVS48_15245 PF04366 CVS48_15245 CVS48_15260 PF01037 AsnC family CVS48_15260 PF13412 Winged helix-turn-helix DNA-binding CVS48_15265 PF00892 EamA-like transporter family CVS48_15270 PF01925 CVS48_15270 CVS48_15285 PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) CVS48_15295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_15295 PF03466 LysR substrate binding domain CVS48_15300 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_15305 PF05013 N-formylglutamate amidohydrolase CVS48_15315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_15315 PF03466 LysR substrate binding domain CVS48_15320 PF13593 SBF-like CPA transporter family (DUF4137) CVS48_15325 PF00355 Rieske [2Fe-2S] domain CVS48_15330 PF00005 ABC transporter CVS48_15330 PF00664 ABC transporter transmembrane region CVS48_15335 PF00248 Aldo/keto reductase family CVS48_15345 PF03929 CVS48_15345 CVS48_15350 PF00149 Calcineurin-like phosphoesterase CVS48_15355 PF00905 Penicillin binding protein transpeptidase domain CVS48_15355 PF00912 Transglycosylase CVS48_15355 PF17092 CVS48_15355 CVS48_15360 PF02311 AraC-like ligand binding domain CVS48_15360 PF12833 Helix-turn-helix domain CVS48_15365 PF07690 Major Facilitator Superfamily CVS48_15370 PF00990 GGDEF domain CVS48_15375 PF00326 Prolyl oligopeptidase family CVS48_15385 PF03061 Thioesterase superfamily CVS48_15390 PF00817 impB/mucB/samB family CVS48_15390 PF11798 IMS family HHH motif CVS48_15390 PF11799 impB/mucB/samB family C-terminal domain CVS48_15395 PF09424 Yqey-like protein CVS48_15405 PF00109 Beta-ketoacyl synthase, N-terminal domain CVS48_15405 PF02801 Beta-ketoacyl synthase, C-terminal domain CVS48_15410 PF13561 Enoyl-(Acyl carrier protein) reductase CVS48_15420 PF00109 Beta-ketoacyl synthase, N-terminal domain CVS48_15420 PF02801 Beta-ketoacyl synthase, C-terminal domain CVS48_15430 PF01494 FAD binding domain CVS48_15435 PF03176 MMPL family CVS48_15440 PF03548 Outer membrane lipoprotein carrier protein LolA CVS48_15445 PF13279 Thioesterase-like superfamily CVS48_15450 PF03279 CVS48_15450 CVS48_15455 PF00535 Glycosyl transferase family 2 CVS48_15460 PF00501 AMP-binding enzyme CVS48_15470 PF00550 Phosphopantetheine attachment site CVS48_15475 PF00550 Phosphopantetheine attachment site CVS48_15480 PF01553 Acyltransferase CVS48_15485 PF13723 CVS48_15485 CVS48_15490 PF01648 4'-phosphopantetheinyl transferase superfamily CVS48_15495 PF00042 Globin CVS48_15495 PF00175 Oxidoreductase NAD-binding domain CVS48_15495 PF00970 Oxidoreductase FAD-binding domain CVS48_15500 PF02082 Transcriptional regulator CVS48_15505 PF01266 FAD dependent oxidoreductase CVS48_15510 PF01619 Proline dehydrogenase CVS48_15515 PF02311 AraC-like ligand binding domain CVS48_15515 PF12833 Helix-turn-helix domain CVS48_15520 PF03358 NADPH-dependent FMN reductase CVS48_15525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_15525 PF03466 LysR substrate binding domain CVS48_15530 PF07690 Major Facilitator Superfamily CVS48_15540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_15540 PF03466 LysR substrate binding domain CVS48_15545 PF00043 Glutathione S-transferase, C-terminal domain CVS48_15545 PF02798 Glutathione S-transferase, N-terminal domain CVS48_15550 PF01243 Pyridoxamine 5'-phosphate oxidase CVS48_15555 PF01638 HxlR-like helix-turn-helix CVS48_15560 PF07690 Major Facilitator Superfamily CVS48_15565 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CVS48_15565 PF02770 Acyl-CoA dehydrogenase, middle domain CVS48_15565 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CVS48_15565 PF12418 CVS48_15565 CVS48_15565 PF12806 CVS48_15565 CVS48_15570 PF00501 AMP-binding enzyme CVS48_15570 PF13193 AMP-binding enzyme C-terminal domain CVS48_15575 PF00027 Cyclic nucleotide-binding domain CVS48_15575 PF13545 Crp-like helix-turn-helix domain CVS48_15580 PF01177 Asp/Glu/Hydantoin racemase CVS48_15585 PF12802 MarR family CVS48_15590 PF00456 Transketolase, thiamine diphosphate binding domain CVS48_15595 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CVS48_15595 PF07992 Pyridine nucleotide-disulphide oxidoreductase CVS48_15600 PF01904 Protein of unknown function DUF72 CVS48_15605 PF01810 CVS48_15605 CVS48_15615 PF00155 Aminotransferase class I and II CVS48_15615 PF00392 Bacterial regulatory proteins, gntR family CVS48_15620 PF13302 Acetyltransferase (GNAT) domain CVS48_15625 PF00892 EamA-like transporter family CVS48_15630 PF00892 EamA-like transporter family CVS48_15635 PF00085 Thioredoxin CVS48_15640 PF01546 Peptidase family M20/M25/M40 CVS48_15645 PF00378 Enoyl-CoA hydratase/isomerase family CVS48_15650 PF13561 Enoyl-(Acyl carrier protein) reductase CVS48_15655 PF00440 Bacterial regulatory proteins, tetR family CVS48_15655 PF08359 YsiA-like protein, C-terminal region CVS48_15660 PF00501 AMP-binding enzyme CVS48_15660 PF13193 AMP-binding enzyme C-terminal domain CVS48_15665 PF00821 Phosphoenolpyruvate carboxykinase CVS48_15665 PF17297 CVS48_15665 CVS48_15670 PF06250 CVS48_15670 CVS48_15675 PF13649 Methyltransferase domain CVS48_15680 PF02678 Pirin CVS48_15680 PF05726 Pirin C-terminal cupin domain CVS48_15685 PF03167 Uracil DNA glycosylase superfamily CVS48_15690 PF13247 4Fe-4S dicluster domain CVS48_15695 PF03916 CVS48_15695 CVS48_15700 PF00384 Molybdopterin oxidoreductase CVS48_15700 PF01568 Molydopterin dinucleotide binding domain CVS48_15705 PF07719 Tetratricopeptide repeat CVS48_15710 PF03918 Cytochrome C biogenesis protein CVS48_15715 PF00578 AhpC/TSA family CVS48_15720 PF01578 CVS48_15720 CVS48_15720 PF16327 CVS48_15720 CVS48_15730 PF04995 CVS48_15730 CVS48_15735 PF01578 CVS48_15735 CVS48_15740 PF03379 CVS48_15740 CVS48_15745 PF00005 ABC transporter CVS48_15750 PF03264 NapC/NirT cytochrome c family, N-terminal region CVS48_15755 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) CVS48_15760 PF00384 Molybdopterin oxidoreductase CVS48_15760 PF01568 Molydopterin dinucleotide binding domain CVS48_15760 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CVS48_15765 PF03927 NapD protein CVS48_15770 PF06796 CVS48_15770 CVS48_15775 PF05853 Prokaryotic protein of unknown function (DUF849) CVS48_15780 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CVS48_15780 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CVS48_15785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_15785 PF03466 LysR substrate binding domain CVS48_15790 PF04014 Antidote-toxin recognition MazE CVS48_15795 PF01850 PIN domain CVS48_15800 PF00392 Bacterial regulatory proteins, gntR family CVS48_15800 PF07729 FCD domain CVS48_15805 PF00920 Dehydratase family CVS48_15810 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_15815 PF00563 EAL domain CVS48_15815 PF00990 GGDEF domain CVS48_15815 PF13426 PAS domain CVS48_15820 PF00378 Enoyl-CoA hydratase/isomerase family CVS48_15825 PF00593 TonB dependent receptor CVS48_15825 PF07715 TonB-dependent Receptor Plug Domain CVS48_15830 PF13561 Enoyl-(Acyl carrier protein) reductase CVS48_15835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_15835 PF03466 LysR substrate binding domain CVS48_15845 PF00293 NUDIX domain CVS48_15850 PF13458 Periplasmic binding protein CVS48_15855 PF00392 Bacterial regulatory proteins, gntR family CVS48_15855 PF07702 UTRA domain CVS48_15860 PF00501 AMP-binding enzyme CVS48_15860 PF13193 AMP-binding enzyme C-terminal domain CVS48_15865 PF04199 Putative cyclase CVS48_15870 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_15875 PF13561 Enoyl-(Acyl carrier protein) reductase CVS48_15885 PF00165 Bacterial regulatory helix-turn-helix proteins, AraC family CVS48_15885 PF01965 DJ-1/PfpI family CVS48_15890 PF01965 DJ-1/PfpI family CVS48_15895 PF00005 ABC transporter CVS48_15895 PF00664 ABC transporter transmembrane region CVS48_15900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_15900 PF03466 LysR substrate binding domain CVS48_15905 PF01804 Penicillin amidase CVS48_15910 PF00005 ABC transporter CVS48_15910 PF00664 ABC transporter transmembrane region CVS48_15915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_15915 PF03466 LysR substrate binding domain CVS48_15920 PF00005 ABC transporter CVS48_15925 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_15930 PF09084 NMT1/THI5 like CVS48_15935 PF01266 FAD dependent oxidoreductase CVS48_15940 PF05962 HutD CVS48_15945 PF01012 Electron transfer flavoprotein domain CVS48_15950 PF00766 Electron transfer flavoprotein FAD-binding domain CVS48_15950 PF01012 Electron transfer flavoprotein domain CVS48_15955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_15955 PF03466 LysR substrate binding domain CVS48_15960 PF05013 N-formylglutamate amidohydrolase CVS48_15965 PF01914 CVS48_15965 CVS48_15975 PF00296 Luciferase-like monooxygenase CVS48_15980 PF13561 Enoyl-(Acyl carrier protein) reductase CVS48_15985 PF00474 Sodium:solute symporter family CVS48_15995 PF03372 Endonuclease/Exonuclease/phosphatase family CVS48_16005 PF03062 CVS48_16005 CVS48_16010 PF00392 Bacterial regulatory proteins, gntR family CVS48_16010 PF07729 FCD domain CVS48_16015 PF00171 Aldehyde dehydrogenase family CVS48_16020 PF00677 Lumazine binding domain CVS48_16025 PF07171 MlrC C-terminus CVS48_16025 PF07364 Protein of unknown function (DUF1485) CVS48_16030 PF00596 Class II Aldolase and Adducin N-terminal domain CVS48_16035 PF13302 Acetyltransferase (GNAT) domain CVS48_16040 PF00122 E1-E2 ATPase CVS48_16040 PF00702 haloacid dehalogenase-like hydrolase CVS48_16045 PF13411 MerR HTH family regulatory protein CVS48_16050 PF00881 Nitroreductase family CVS48_16055 PF04542 Sigma-70 region 2 CVS48_16055 PF08281 Sigma-70, region 4 CVS48_16060 PF04773 FecR protein CVS48_16060 PF16220 CVS48_16060 CVS48_16065 PF00593 TonB dependent receptor CVS48_16065 PF07715 TonB-dependent Receptor Plug Domain CVS48_16070 PF00676 Dehydrogenase E1 component CVS48_16070 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal CVS48_16075 PF02779 Transketolase, pyrimidine binding domain CVS48_16075 PF02780 Transketolase, C-terminal domain CVS48_16080 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CVS48_16080 PF00364 Biotin-requiring enzyme CVS48_16080 PF02817 e3 binding domain CVS48_16085 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CVS48_16085 PF07992 Pyridine nucleotide-disulphide oxidoreductase CVS48_16090 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CVS48_16100 PF00593 TonB dependent receptor CVS48_16100 PF07660 Secretin and TonB N terminus short domain CVS48_16100 PF07715 TonB-dependent Receptor Plug Domain CVS48_16105 PF04773 FecR protein CVS48_16105 PF16220 CVS48_16105 CVS48_16105 PF16344 CVS48_16105 CVS48_16110 PF04542 Sigma-70 region 2 CVS48_16110 PF08281 Sigma-70, region 4 CVS48_16115 PF00206 Lyase CVS48_16115 PF14698 Argininosuccinate lyase C-terminal CVS48_16120 PF00924 Mechanosensitive ion channel CVS48_16125 PF00795 Carbon-nitrogen hydrolase CVS48_16125 PF02540 NAD synthase CVS48_16130 PF00543 Nitrogen regulatory protein P-II CVS48_16135 PF00482 Type II secretion system (T2SS), protein F CVS48_16140 PF00263 CVS48_16140 CVS48_16140 PF03958 Bacterial type II/III secretion system short domain CVS48_16145 PF00437 Type II/IV secretion system protein CVS48_16150 PF01203 CVS48_16150 CVS48_16155 PF04612 Type II secretion system (T2SS), protein M CVS48_16160 PF12693 GspL periplasmic domain CVS48_16165 PF03934 Type II secretion system (T2SS), protein K CVS48_16170 PF07963 Prokaryotic N-terminal methylation motif CVS48_16170 PF11612 Type II secretion system (T2SS), protein J CVS48_16175 PF02501 Type II secretion system (T2SS), protein I CVS48_16180 PF07963 Prokaryotic N-terminal methylation motif CVS48_16180 PF12019 Type II transport protein GspH CVS48_16185 PF07963 Prokaryotic N-terminal methylation motif CVS48_16185 PF08334 Type II secretion system (T2SS), protein G CVS48_16190 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_16195 PF01370 NAD dependent epimerase/dehydratase family CVS48_16200 PF00171 Aldehyde dehydrogenase family CVS48_16205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_16205 PF03466 LysR substrate binding domain CVS48_16215 PF05787 Bacterial protein of unknown function (DUF839) CVS48_16220 PF05787 Bacterial protein of unknown function (DUF839) CVS48_16225 PF13385 Concanavalin A-like lectin/glucanases superfamily CVS48_16230 PF04185 Phosphoesterase family CVS48_16230 PF05506 CVS48_16230 CVS48_16235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_16235 PF03466 LysR substrate binding domain CVS48_16240 PF01019 Gamma-glutamyltranspeptidase CVS48_16245 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CVS48_16250 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_16255 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_16255 PF12911 CVS48_16255 CVS48_16260 PF00005 ABC transporter CVS48_16260 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS48_16270 PF07152 YaeQ protein CVS48_16275 PF00440 Bacterial regulatory proteins, tetR family CVS48_16280 PF00106 short chain dehydrogenase CVS48_16285 PF07690 Major Facilitator Superfamily CVS48_16295 PF00512 His Kinase A (phospho-acceptor) domain CVS48_16295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_16295 PF08521 CVS48_16295 CVS48_16300 PF00072 Response regulator receiver domain CVS48_16300 PF00486 Transcriptional regulatory protein, C terminal CVS48_16305 PF12261 CVS48_16305 CVS48_16310 PF00501 AMP-binding enzyme CVS48_16315 PF14518 Iron-containing redox enzyme CVS48_16320 PF00106 short chain dehydrogenase CVS48_16325 PF13181 Tetratricopeptide repeat CVS48_16345 PF00593 TonB dependent receptor CVS48_16345 PF07715 TonB-dependent Receptor Plug Domain CVS48_16350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_16350 PF03466 LysR substrate binding domain CVS48_16355 PF00043 Glutathione S-transferase, C-terminal domain CVS48_16355 PF02798 Glutathione S-transferase, N-terminal domain CVS48_16360 PF00296 Luciferase-like monooxygenase CVS48_16365 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_16370 PF00206 Lyase CVS48_16370 PF14698 Argininosuccinate lyase C-terminal CVS48_16375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_16375 PF03466 LysR substrate binding domain CVS48_16380 PF04542 Sigma-70 region 2 CVS48_16380 PF08281 Sigma-70, region 4 CVS48_16385 PF04773 FecR protein CVS48_16385 PF16220 CVS48_16385 CVS48_16390 PF00593 TonB dependent receptor CVS48_16390 PF07660 Secretin and TonB N terminus short domain CVS48_16390 PF07715 TonB-dependent Receptor Plug Domain CVS48_16395 PF01638 HxlR-like helix-turn-helix CVS48_16400 PF00107 Zinc-binding dehydrogenase CVS48_16400 PF08240 Alcohol dehydrogenase GroES-like domain CVS48_16415 PF01926 50S ribosome-binding GTPase CVS48_16435 PF01266 FAD dependent oxidoreductase CVS48_16440 PF13561 Enoyl-(Acyl carrier protein) reductase CVS48_16450 PF10117 CVS48_16450 CVS48_16455 PF07728 AAA domain (dynein-related subfamily) CVS48_16470 PF03795 YCII-related domain CVS48_16475 PF03797 Autotransporter beta-domain CVS48_16475 PF12951 CVS48_16475 CVS48_16480 PF13673 Acetyltransferase (GNAT) domain CVS48_16485 PF01381 Helix-turn-helix CVS48_16490 PF13338 CVS48_16490 CVS48_16495 PF08843 Nucleotidyl transferase of unknown function (DUF1814) CVS48_16500 PF00392 Bacterial regulatory proteins, gntR family CVS48_16500 PF07702 UTRA domain CVS48_16505 PF13458 Periplasmic binding protein CVS48_16510 PF02653 CVS48_16510 CVS48_16515 PF02653 CVS48_16515 CVS48_16520 PF00005 ABC transporter CVS48_16520 PF12399 Branched-chain amino acid ATP-binding cassette transporter CVS48_16525 PF00005 ABC transporter CVS48_16530 PF00330 Aconitase family (aconitate hydratase) CVS48_16535 PF00694 Aconitase C-terminal domain CVS48_16540 PF02538 CVS48_16540 CVS48_16545 PF01968 Hydantoinase/oxoprolinase CVS48_16545 PF05378 CVS48_16545 CVS48_16550 PF00857 Isochorismatase family CVS48_16555 PF00890 FAD binding domain CVS48_16560 PF13714 Phosphoenolpyruvate phosphomutase CVS48_16570 PF00916 CVS48_16570 CVS48_16570 PF01740 STAS domain CVS48_16575 PF04345 Chorismate lyase CVS48_16580 PF00795 Carbon-nitrogen hydrolase CVS48_16585 PF13458 Periplasmic binding protein CVS48_16590 PF02653 CVS48_16590 CVS48_16595 PF00005 ABC transporter CVS48_16595 PF02653 CVS48_16595 CVS48_16600 PF00005 ABC transporter CVS48_16605 PF13433 Periplasmic binding protein domain CVS48_16610 PF03861 ANTAR domain CVS48_16615 PF07171 MlrC C-terminus CVS48_16615 PF07364 Protein of unknown function (DUF1485) CVS48_16620 PF00849 RNA pseudouridylate synthase CVS48_16620 PF01479 S4 domain CVS48_16625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_16625 PF03466 LysR substrate binding domain CVS48_16630 PF16576 CVS48_16630 CVS48_16635 PF00873 AcrB/AcrD/AcrF family CVS48_16640 PF02321 Outer membrane efflux protein CVS48_16645 PF04226 CVS48_16645 CVS48_16650 PF02630 SCO1/SenC CVS48_16655 PF13489 Methyltransferase domain CVS48_16660 PF01432 Peptidase family M3 CVS48_16665 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CVS48_16665 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CVS48_16670 PF00072 Response regulator receiver domain CVS48_16670 PF00196 Bacterial regulatory proteins, luxR family CVS48_16675 PF00512 His Kinase A (phospho-acceptor) domain CVS48_16675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_16675 PF08448 PAS fold CVS48_16675 PF13188 PAS domain CVS48_16680 PF00456 Transketolase, thiamine diphosphate binding domain CVS48_16685 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CVS48_16685 PF00364 Biotin-requiring enzyme CVS48_16685 PF02817 e3 binding domain CVS48_16690 PF00364 Biotin-requiring enzyme CVS48_16690 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CVS48_16690 PF07992 Pyridine nucleotide-disulphide oxidoreductase CVS48_16695 PF14070 CVS48_16695 CVS48_16705 PF05711 Macrocin-O-methyltransferase (TylF) CVS48_16710 PF05721 Phytanoyl-CoA dioxygenase (PhyH) CVS48_16715 PF00132 Bacterial transferase hexapeptide (six repeats) CVS48_16720 PF04989 Cephalosporin hydroxylase CVS48_16725 PF01370 NAD dependent epimerase/dehydratase family CVS48_16730 PF08421 Putative zinc binding domain CVS48_16730 PF08484 C-methyltransferase C-terminal domain CVS48_16730 PF13489 Methyltransferase domain CVS48_16735 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CVS48_16740 PF16363 CVS48_16740 CVS48_16745 PF00483 Nucleotidyl transferase CVS48_16750 PF10119 CVS48_16750 CVS48_16750 PF13181 Tetratricopeptide repeat CVS48_16750 PF13432 Tetratricopeptide repeat CVS48_16750 PF13649 Methyltransferase domain CVS48_16750 PF13844 Glycosyl transferase family 41 CVS48_16755 PF00669 Bacterial flagellin N-terminal helical region CVS48_16755 PF00700 Bacterial flagellin C-terminal helical region CVS48_16755 PF12445 CVS48_16755 CVS48_16760 PF04539 Sigma-70 region 3 CVS48_16760 PF04542 Sigma-70 region 2 CVS48_16760 PF04545 Sigma-70, region 4 CVS48_16765 PF05247 Flagellar transcriptional activator (FlhD) CVS48_16770 PF05280 Flagellar transcriptional activator (FlhC) CVS48_16775 PF01618 CVS48_16775 CVS48_16780 PF00691 OmpA family CVS48_16780 PF13677 CVS48_16780 CVS48_16785 PF00072 Response regulator receiver domain CVS48_16790 PF01584 CheW-like domain CVS48_16790 PF01627 Hpt domain CVS48_16790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_16790 PF02895 Signal transducing histidine kinase, homodimeric domain CVS48_16790 PF09078 CheY binding CVS48_16795 PF01584 CheW-like domain CVS48_16800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CVS48_16800 PF00672 HAMP domain CVS48_16800 PF02203 Tar ligand binding domain homologue CVS48_16805 PF01739 CheR methyltransferase, SAM binding domain CVS48_16805 PF03705 CheR methyltransferase, all-alpha domain CVS48_16810 PF00072 Response regulator receiver domain CVS48_16810 PF01339 CheB methylesterase CVS48_16815 PF00072 Response regulator receiver domain CVS48_16820 PF04344 Chemotaxis phosphatase, CheZ CVS48_16825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CVS48_16830 PF01312 FlhB HrpN YscU SpaS Family CVS48_16835 PF00771 FHIPEP family CVS48_16840 PF00448 SRP54-type protein, GTPase domain CVS48_16845 PF05130 FlgN protein CVS48_16850 PF04316 Anti-sigma-28 factor, FlgM CVS48_16855 PF13144 SAF-like CVS48_16860 PF00460 Flagella basal body rod protein CVS48_16865 PF00460 Flagella basal body rod protein CVS48_16865 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CVS48_16870 PF03963 CVS48_16870 CVS48_16870 PF13860 FlgD Ig-like domain CVS48_16870 PF13861 FlgD Tudor-like domain CVS48_16875 PF00460 Flagella basal body rod protein CVS48_16875 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CVS48_16875 PF07559 Flagellar basal body protein FlaE CVS48_16880 PF00460 Flagella basal body rod protein CVS48_16880 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CVS48_16885 PF00460 Flagella basal body rod protein CVS48_16885 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CVS48_16890 PF02107 CVS48_16890 CVS48_16895 PF02119 CVS48_16895 CVS48_16900 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CVS48_16900 PF10135 CVS48_16900 CVS48_16905 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CVS48_16910 PF00669 Bacterial flagellin N-terminal helical region CVS48_16915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CVS48_16915 PF00672 HAMP domain CVS48_16915 PF02203 Tar ligand binding domain homologue CVS48_16920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CVS48_16920 PF00672 HAMP domain CVS48_16920 PF02203 Tar ligand binding domain homologue CVS48_16935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CVS48_16935 PF08447 PAS fold CVS48_16940 PF01311 CVS48_16940 CVS48_16945 PF01313 CVS48_16945 CVS48_16950 PF00813 CVS48_16950 CVS48_16955 PF04347 CVS48_16955 CVS48_16960 PF01052 Surface presentation of antigens (SPOA) CVS48_16965 PF01052 Surface presentation of antigens (SPOA) CVS48_16965 PF02154 Flagellar motor switch protein FliM CVS48_16970 PF03748 CVS48_16970 CVS48_16975 PF02120 Flagellar hook-length control protein FliK CVS48_16980 PF02050 Flagellar FliJ protein CVS48_16985 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CVS48_16990 PF02108 CVS48_16990 CVS48_16995 PF01706 FliG C-terminal domain CVS48_16995 PF14841 FliG middle domain CVS48_16995 PF14842 FliG N-terminal domain CVS48_17000 PF01514 Secretory protein of YscJ/FliF family CVS48_17000 PF08345 CVS48_17000 CVS48_17005 PF02049 CVS48_17005 CVS48_17015 PF01312 FlhB HrpN YscU SpaS Family CVS48_17020 PF02120 Flagellar hook-length control protein FliK CVS48_17025 PF05400 Flagellar protein FliT CVS48_17030 PF02561 Flagellar protein FliS CVS48_17035 PF02465 CVS48_17035 CVS48_17035 PF07195 CVS48_17035 CVS48_17035 PF07196 Flagellin hook IN motif CVS48_17040 PF03646 FlaG protein CVS48_17045 PF01614 Bacterial transcriptional regulator CVS48_17045 PF09339 IclR helix-turn-helix domain CVS48_17050 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CVS48_17050 PF02770 Acyl-CoA dehydrogenase, middle domain CVS48_17050 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CVS48_17055 PF02515 CoA-transferase family III CVS48_17060 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_17065 PF07883 Cupin domain CVS48_17070 PF08245 Mur ligase middle domain CVS48_17075 PF05036 Sporulation related domain CVS48_17080 PF02674 CVS48_17080 CVS48_17085 PF00156 Phosphoribosyl transferase domain CVS48_17085 PF13522 Glutamine amidotransferase domain CVS48_17095 PF01863 Protein of unknown function DUF45 CVS48_17100 PF02600 Disulfide bond formation protein DsbB CVS48_17105 PF01914 CVS48_17105 CVS48_17110 PF01842 ACT domain CVS48_17110 PF01909 Nucleotidyltransferase domain CVS48_17110 PF01966 HD domain CVS48_17110 PF08335 GlnD PII-uridylyltransferase CVS48_17115 PF00557 Metallopeptidase family M24 CVS48_17120 PF00318 Ribosomal protein S2 CVS48_17125 PF00889 Elongation factor TS CVS48_17130 PF00696 Amino acid kinase family CVS48_17135 PF01765 Ribosome recycling factor CVS48_17140 PF01255 Putative undecaprenyl diphosphate synthase CVS48_17145 PF01148 Cytidylyltransferase family CVS48_17150 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CVS48_17150 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal CVS48_17150 PF13288 DXP reductoisomerase C-terminal domain CVS48_17155 PF02163 Peptidase family M50 CVS48_17155 PF13180 PDZ domain CVS48_17160 PF01103 Surface antigen CVS48_17160 PF07244 Surface antigen variable number repeat CVS48_17165 PF03938 Outer membrane protein (OmpH-like) CVS48_17170 PF00132 Bacterial transferase hexapeptide (six repeats) CVS48_17170 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CVS48_17170 PF14602 Hexapeptide repeat of succinyl-transferase CVS48_17175 PF07977 FabA-like domain CVS48_17180 PF00132 Bacterial transferase hexapeptide (six repeats) CVS48_17180 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CVS48_17185 PF02684 CVS48_17185 CVS48_17190 PF01351 Ribonuclease HII CVS48_17195 PF00588 SpoU rRNA Methylase family CVS48_17210 PF03618 CVS48_17210 CVS48_17215 PF00391 PEP-utilising enzyme, mobile domain CVS48_17215 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CVS48_17215 PF02896 PEP-utilising enzyme, TIM barrel domain CVS48_17220 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CVS48_17220 PF12833 Helix-turn-helix domain CVS48_17225 PF00117 Glutamine amidotransferase class-I CVS48_17235 PF01145 SPFH domain / Band 7 family CVS48_17235 PF16200 CVS48_17235 CVS48_17240 PF00990 GGDEF domain CVS48_17245 PF01668 SmpB protein CVS48_17250 PF03364 Polyketide cyclase / dehydrase and lipid transport CVS48_17255 PF03658 RnfH family Ubiquitin CVS48_17260 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CVS48_17260 PF02770 Acyl-CoA dehydrogenase, middle domain CVS48_17260 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CVS48_17265 PF16113 CVS48_17265 CVS48_17270 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CVS48_17270 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CVS48_17275 PF03061 Thioesterase superfamily CVS48_17280 PF01988 CVS48_17280 CVS48_17290 PF02618 YceG-like family CVS48_17295 PF02223 Thymidylate kinase CVS48_17300 PF13177 DNA polymerase III, delta subunit CVS48_17305 PF01026 TatD related DNase CVS48_17310 PF12796 Ankyrin repeats (3 copies) CVS48_17315 PF01614 Bacterial transcriptional regulator CVS48_17315 PF09339 IclR helix-turn-helix domain CVS48_17320 PF00497 Bacterial extracellular solute-binding proteins, family 3 CVS48_17325 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_17330 PF00005 ABC transporter CVS48_17335 PF00491 Arginase family CVS48_17340 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CVS48_17340 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CVS48_17345 PF13609 Gram-negative porin CVS48_17350 PF11738 Protein of unknown function (DUF3298) CVS48_17355 PF03099 Biotin/lipoate A/B protein ligase family CVS48_17360 PF10437 Bacterial lipoate protein ligase C-terminus CVS48_17365 PF00583 Acetyltransferase (GNAT) family CVS48_17370 PF00043 Glutathione S-transferase, C-terminal domain CVS48_17370 PF02798 Glutathione S-transferase, N-terminal domain CVS48_17375 PF00892 EamA-like transporter family CVS48_17380 PF01037 AsnC family CVS48_17380 PF13412 Winged helix-turn-helix DNA-binding CVS48_17385 PF00255 Glutathione peroxidase CVS48_17390 PF13432 Tetratricopeptide repeat CVS48_17395 PF00875 DNA photolyase CVS48_17395 PF03441 FAD binding domain of DNA photolyase CVS48_17400 PF02515 CoA-transferase family III CVS48_17405 PF00578 AhpC/TSA family CVS48_17415 PF07681 CVS48_17415 CVS48_17430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_17430 PF03466 LysR substrate binding domain CVS48_17435 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CVS48_17435 PF13378 Enolase C-terminal domain-like CVS48_17440 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_17445 PF04542 Sigma-70 region 2 CVS48_17445 PF08281 Sigma-70, region 4 CVS48_17450 PF04773 FecR protein CVS48_17450 PF16220 CVS48_17450 CVS48_17455 PF00593 TonB dependent receptor CVS48_17455 PF07715 TonB-dependent Receptor Plug Domain CVS48_17460 PF07804 HipA-like C-terminal domain CVS48_17460 PF13657 HipA N-terminal domain CVS48_17465 PF01381 Helix-turn-helix CVS48_17470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_17470 PF03466 LysR substrate binding domain CVS48_17475 PF07883 Cupin domain CVS48_17480 PF02627 Carboxymuconolactone decarboxylase family CVS48_17485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_17485 PF03466 LysR substrate binding domain CVS48_17495 PF07690 Major Facilitator Superfamily CVS48_17500 PF12951 CVS48_17500 CVS48_17500 PF13018 CVS48_17500 CVS48_17520 PF06627 Protein of unknown function (DUF1153) CVS48_17530 PF03797 Autotransporter beta-domain CVS48_17530 PF12951 CVS48_17530 CVS48_17530 PF13018 CVS48_17530 CVS48_17535 PF01625 Peptide methionine sulfoxide reductase CVS48_17540 PF01641 SelR domain CVS48_17550 PF00174 Oxidoreductase molybdopterin binding domain CVS48_17555 PF01292 Prokaryotic cytochrome b561 CVS48_17560 PF00072 Response regulator receiver domain CVS48_17560 PF00486 Transcriptional regulatory protein, C terminal CVS48_17565 PF00512 His Kinase A (phospho-acceptor) domain CVS48_17565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_17570 PF03060 Nitronate monooxygenase CVS48_17575 PF01614 Bacterial transcriptional regulator CVS48_17575 PF09339 IclR helix-turn-helix domain CVS48_17580 PF00682 HMGL-like CVS48_17585 PF02515 CoA-transferase family III CVS48_17590 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_17600 PF01970 CVS48_17600 CVS48_17610 PF00368 Hydroxymethylglutaryl-coenzyme A reductase CVS48_17615 PF00155 Aminotransferase class I and II CVS48_17615 PF00392 Bacterial regulatory proteins, gntR family CVS48_17620 PF04055 Radical SAM superfamily CVS48_17620 PF13353 4Fe-4S single cluster domain CVS48_17625 PF13597 Anaerobic ribonucleoside-triphosphate reductase CVS48_17630 PF11804 CVS48_17630 CVS48_17635 PF03929 CVS48_17635 CVS48_17645 PF00199 Catalase CVS48_17645 PF01965 DJ-1/PfpI family CVS48_17645 PF06628 Catalase-related immune-responsive CVS48_17650 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_17655 PF01546 Peptidase family M20/M25/M40 CVS48_17655 PF07687 Peptidase dimerisation domain CVS48_17660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_17660 PF03466 LysR substrate binding domain CVS48_17665 PF00873 AcrB/AcrD/AcrF family CVS48_17670 PF00873 AcrB/AcrD/AcrF family CVS48_17675 PF16576 CVS48_17675 CVS48_17685 PF05940 CVS48_17685 CVS48_17690 PF03205 Molybdopterin guanine dinucleotide synthesis protein B CVS48_17695 PF05658 Head domain of trimeric autotransporter adhesin CVS48_17695 PF05662 Coiled stalk of trimeric autotransporter adhesin CVS48_17695 PF13018 CVS48_17695 CVS48_17700 PF13211 CVS48_17700 CVS48_17705 PF00083 Sugar (and other) transporter CVS48_17710 PF00850 Histone deacetylase domain CVS48_17715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_17715 PF03466 LysR substrate binding domain CVS48_17720 PF01053 Cys/Met metabolism PLP-dependent enzyme CVS48_17735 PF00582 Universal stress protein family CVS48_17740 PF03741 CVS48_17740 CVS48_17745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_17745 PF03466 LysR substrate binding domain CVS48_17750 PF00392 Bacterial regulatory proteins, gntR family CVS48_17750 PF07729 FCD domain CVS48_17755 PF00920 Dehydratase family CVS48_17760 PF03737 Demethylmenaquinone methyltransferase CVS48_17765 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_17770 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_17775 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CVS48_17775 PF13378 Enolase C-terminal domain-like CVS48_17780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_17780 PF03466 LysR substrate binding domain CVS48_17795 PF00990 GGDEF domain CVS48_17810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_17810 PF03466 LysR substrate binding domain CVS48_17815 PF00884 Sulfatase CVS48_17815 PF14707 C-terminal region of aryl-sulfatase CVS48_17820 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_17825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_17825 PF03466 LysR substrate binding domain CVS48_17830 PF01042 Endoribonuclease L-PSP CVS48_17840 PF13827 CVS48_17840 CVS48_17845 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_17850 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CVS48_17850 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CVS48_17855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_17855 PF03466 LysR substrate binding domain CVS48_17860 PF01070 FMN-dependent dehydrogenase CVS48_17875 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_17880 PF00497 Bacterial extracellular solute-binding proteins, family 3 CVS48_17885 PF00497 Bacterial extracellular solute-binding proteins, family 3 CVS48_17890 PF00155 Aminotransferase class I and II CVS48_17895 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_17900 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_17905 PF00005 ABC transporter CVS48_17910 PF01053 Cys/Met metabolism PLP-dependent enzyme CVS48_17920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_17920 PF03466 LysR substrate binding domain CVS48_17925 PF00581 Rhodanese-like domain CVS48_17930 PF00990 GGDEF domain CVS48_17940 PF03928 Domain of unknown function (DUF336) CVS48_17945 PF00072 Response regulator receiver domain CVS48_17945 PF00196 Bacterial regulatory proteins, luxR family CVS48_17950 PF00512 His Kinase A (phospho-acceptor) domain CVS48_17950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_17955 PF00571 CBS domain CVS48_17955 PF04982 CVS48_17955 CVS48_17960 PF12802 MarR family CVS48_17965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_17965 PF03466 LysR substrate binding domain CVS48_17970 PF01118 Semialdehyde dehydrogenase, NAD binding domain CVS48_17975 PF00753 Metallo-beta-lactamase superfamily CVS48_17980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_17980 PF03466 LysR substrate binding domain CVS48_17985 PF00501 AMP-binding enzyme CVS48_17985 PF13193 AMP-binding enzyme C-terminal domain CVS48_17990 PF07690 Major Facilitator Superfamily CVS48_18000 PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) CVS48_18005 PF08534 Redoxin CVS48_18010 PF00497 Bacterial extracellular solute-binding proteins, family 3 CVS48_18015 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_18020 PF00005 ABC transporter CVS48_18025 PF13231 CVS48_18025 CVS48_18030 PF03971 Monomeric isocitrate dehydrogenase CVS48_18035 PF00291 Pyridoxal-phosphate dependent enzyme CVS48_18035 PF00585 C-terminal regulatory domain of Threonine dehydratase CVS48_18045 PF07786 CVS48_18045 CVS48_18050 PF13609 Gram-negative porin CVS48_18055 PF00005 ABC transporter CVS48_18060 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_18065 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_18070 PF00155 Aminotransferase class I and II CVS48_18075 PF00497 Bacterial extracellular solute-binding proteins, family 3 CVS48_18080 PF00392 Bacterial regulatory proteins, gntR family CVS48_18080 PF07729 FCD domain CVS48_18085 PF00701 Dihydrodipicolinate synthetase family CVS48_18090 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_18095 PF00072 Response regulator receiver domain CVS48_18095 PF00512 His Kinase A (phospho-acceptor) domain CVS48_18095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_18095 PF05227 CHASE3 domain CVS48_18095 PF13185 GAF domain CVS48_18100 PF01739 CheR methyltransferase, SAM binding domain CVS48_18100 PF03705 CheR methyltransferase, all-alpha domain CVS48_18105 PF01339 CheB methylesterase CVS48_18110 PF00072 Response regulator receiver domain CVS48_18110 PF00512 His Kinase A (phospho-acceptor) domain CVS48_18110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_18115 PF00593 TonB dependent receptor CVS48_18115 PF07715 TonB-dependent Receptor Plug Domain CVS48_18120 PF04773 FecR protein CVS48_18120 PF16220 CVS48_18120 CVS48_18125 PF04542 Sigma-70 region 2 CVS48_18125 PF08281 Sigma-70, region 4 CVS48_18130 PF00171 Aldehyde dehydrogenase family CVS48_18135 PF04295 CVS48_18135 CVS48_18135 PF08666 SAF domain CVS48_18140 PF08450 SMP-30/Gluconolaconase/LRE-like region CVS48_18145 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_18155 PF12833 Helix-turn-helix domain CVS48_18160 PF00027 Cyclic nucleotide-binding domain CVS48_18160 PF07992 Pyridine nucleotide-disulphide oxidoreductase CVS48_18165 PF05977 Transmembrane secretion effector CVS48_18170 PF07681 CVS48_18170 CVS48_18175 PF07969 Amidohydrolase family CVS48_18180 PF07235 CVS48_18180 CVS48_18185 PF00857 Isochorismatase family CVS48_18190 PF01841 Transglutaminase-like superfamily CVS48_18190 PF08379 CVS48_18190 CVS48_18195 PF01841 Transglutaminase-like superfamily CVS48_18195 PF08379 CVS48_18195 CVS48_18195 PF09899 CVS48_18195 CVS48_18200 PF04168 CVS48_18200 CVS48_18200 PF14403 CVS48_18200 CVS48_18205 PF01841 Transglutaminase-like superfamily CVS48_18205 PF08379 CVS48_18205 CVS48_18210 PF10005 CVS48_18210 CVS48_18210 PF15887 CVS48_18210 CVS48_18215 PF02661 Fic/DOC family CVS48_18225 PF00171 Aldehyde dehydrogenase family CVS48_18230 PF01546 Peptidase family M20/M25/M40 CVS48_18230 PF07687 Peptidase dimerisation domain CVS48_18235 PF00205 Thiamine pyrophosphate enzyme, central domain CVS48_18235 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CVS48_18235 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CVS48_18240 PF03328 HpcH/HpaI aldolase/citrate lyase family CVS48_18245 PF06808 CVS48_18245 CVS48_18250 PF04290 CVS48_18250 CVS48_18255 PF03480 Bacterial extracellular solute-binding protein, family 7 CVS48_18265 PF00005 ABC transporter CVS48_18270 PF00005 ABC transporter CVS48_18270 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS48_18275 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_18275 PF12911 CVS48_18275 CVS48_18280 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_18285 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CVS48_18290 PF00392 Bacterial regulatory proteins, gntR family CVS48_18290 PF07729 FCD domain CVS48_18295 PF13545 Crp-like helix-turn-helix domain CVS48_18300 PF13545 Crp-like helix-turn-helix domain CVS48_18305 PF07859 alpha/beta hydrolase fold CVS48_18310 PF00005 ABC transporter CVS48_18310 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS48_18315 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_18315 PF12911 CVS48_18315 CVS48_18320 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_18325 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CVS48_18330 PF02538 CVS48_18330 CVS48_18335 PF01968 Hydantoinase/oxoprolinase CVS48_18335 PF05378 CVS48_18335 CVS48_18340 PF13875 CVS48_18340 CVS48_18345 PF04352 ProQ/FINO family CVS48_18355 PF00149 Calcineurin-like phosphoesterase CVS48_18360 PF00593 TonB dependent receptor CVS48_18360 PF07715 TonB-dependent Receptor Plug Domain CVS48_18365 PF00128 Alpha amylase, catalytic domain CVS48_18370 PF02446 4-alpha-glucanotransferase CVS48_18375 PF00128 Alpha amylase, catalytic domain CVS48_18375 PF11941 Domain of unknown function (DUF3459) CVS48_18380 PF00128 Alpha amylase, catalytic domain CVS48_18380 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CVS48_18385 PF00128 Alpha amylase, catalytic domain CVS48_18385 PF02806 Alpha amylase, C-terminal all-beta domain CVS48_18385 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CVS48_18390 PF00128 Alpha amylase, catalytic domain CVS48_18390 PF16657 CVS48_18390 CVS48_18395 PF00128 Alpha amylase, catalytic domain CVS48_18395 PF11896 Domain of unknown function (DUF3416) CVS48_18400 PF00534 Glycosyl transferases group 1 CVS48_18400 PF08323 Starch synthase catalytic domain CVS48_18405 PF00205 Thiamine pyrophosphate enzyme, central domain CVS48_18405 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CVS48_18405 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CVS48_18410 PF05239 PRC-barrel domain CVS48_18415 PF00326 Prolyl oligopeptidase family CVS48_18420 PF11379 CVS48_18420 CVS48_18425 PF03706 CVS48_18425 CVS48_18430 PF13091 PLD-like domain CVS48_18435 PF03372 Endonuclease/Exonuclease/phosphatase family CVS48_18440 PF03737 Demethylmenaquinone methyltransferase CVS48_18460 PF03929 CVS48_18460 CVS48_18465 PF00392 Bacterial regulatory proteins, gntR family CVS48_18465 PF07729 FCD domain CVS48_18470 PF03746 LamB/YcsF family CVS48_18475 PF02626 Allophanate hydrolase subunit 2 CVS48_18475 PF02682 Allophanate hydrolase subunit 1 CVS48_18480 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain CVS48_18480 PF00364 Biotin-requiring enzyme CVS48_18480 PF02785 Biotin carboxylase C-terminal domain CVS48_18480 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CVS48_18485 PF02321 Outer membrane efflux protein CVS48_18490 PF00440 Bacterial regulatory proteins, tetR family CVS48_18495 PF16576 CVS48_18495 CVS48_18500 PF00873 AcrB/AcrD/AcrF family CVS48_18505 PF01425 Amidase CVS48_18510 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_18515 PF00291 Pyridoxal-phosphate dependent enzyme CVS48_18520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_18520 PF03466 LysR substrate binding domain CVS48_18535 PF13649 Methyltransferase domain CVS48_18545 PF00122 E1-E2 ATPase CVS48_18545 PF00689 Cation transporting ATPase, C-terminus CVS48_18545 PF00690 Cation transporter/ATPase, N-terminus CVS48_18545 PF00702 haloacid dehalogenase-like hydrolase CVS48_18550 PF00582 Universal stress protein family CVS48_18555 PF00582 Universal stress protein family CVS48_18560 PF00753 Metallo-beta-lactamase superfamily CVS48_18560 PF07521 RNA-metabolising metallo-beta-lactamase CVS48_18560 PF10996 Beta-Casp domain CVS48_18565 PF00571 CBS domain CVS48_18575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_18575 PF07730 Histidine kinase CVS48_18575 PF13426 PAS domain CVS48_18580 PF00072 Response regulator receiver domain CVS48_18580 PF00196 Bacterial regulatory proteins, luxR family CVS48_18585 PF00027 Cyclic nucleotide-binding domain CVS48_18585 PF13545 Crp-like helix-turn-helix domain CVS48_18590 PF00582 Universal stress protein family CVS48_18595 PF02040 CVS48_18595 CVS48_18600 PF12840 Helix-turn-helix domain CVS48_18605 PF13738 Pyridine nucleotide-disulphide oxidoreductase CVS48_18610 PF03960 ArsC family CVS48_18615 PF07690 Major Facilitator Superfamily CVS48_18620 PF03358 NADPH-dependent FMN reductase CVS48_18625 PF00005 ABC transporter CVS48_18630 PF00005 ABC transporter CVS48_18630 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS48_18635 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_18640 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_18645 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CVS48_18650 PF00266 Aminotransferase class-V CVS48_18655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_18655 PF03466 LysR substrate binding domain CVS48_18660 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_18665 PF01557 Fumarylacetoacetate (FAA) hydrolase family CVS48_18670 PF13577 SnoaL-like domain CVS48_18675 PF07992 Pyridine nucleotide-disulphide oxidoreductase CVS48_18675 PF14759 Reductase C-terminal CVS48_18680 PF00355 Rieske [2Fe-2S] domain CVS48_18685 PF00355 Rieske [2Fe-2S] domain CVS48_18685 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CVS48_18690 PF00866 Ring hydroxylating beta subunit CVS48_18695 PF02311 AraC-like ligand binding domain CVS48_18700 PF02423 Ornithine cyclodeaminase/mu-crystallin family CVS48_18705 PF01557 Fumarylacetoacetate (FAA) hydrolase family CVS48_18710 PF00392 Bacterial regulatory proteins, gntR family CVS48_18710 PF07729 FCD domain CVS48_18715 PF04239 Protein of unknown function (DUF421) CVS48_18720 PF13628 CVS48_18720 CVS48_18730 PF00115 Cytochrome C and Quinol oxidase polypeptide I CVS48_18735 PF00034 Cytochrome c CVS48_18735 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CVS48_18740 PF00034 Cytochrome c CVS48_18745 PF00034 Cytochrome c CVS48_18745 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CVS48_18750 PF00149 Calcineurin-like phosphoesterase CVS48_18755 PF07369 Protein of unknown function (DUF1488) CVS48_18760 PF03167 Uracil DNA glycosylase superfamily CVS48_18765 PF04972 BON domain CVS48_18770 PF00149 Calcineurin-like phosphoesterase CVS48_18775 PF00270 DEAD/DEAH box helicase CVS48_18775 PF00271 Helicase conserved C-terminal domain CVS48_18775 PF08494 CVS48_18775 CVS48_18780 PF01068 ATP dependent DNA ligase domain CVS48_18780 PF04675 DNA ligase N terminus CVS48_18780 PF04679 ATP dependent DNA ligase C terminal region CVS48_18790 PF00535 Glycosyl transferase family 2 CVS48_18795 PF05401 Nodulation protein S (NodS) CVS48_18805 PF01068 ATP dependent DNA ligase domain CVS48_18805 PF01896 Eukaryotic and archaeal DNA primase small subunit CVS48_18805 PF04679 ATP dependent DNA ligase C terminal region CVS48_18805 PF13298 DNA polymerase Ligase (LigD) CVS48_18810 PF02735 Ku70/Ku80 beta-barrel domain CVS48_18815 PF13520 Amino acid permease CVS48_18820 PF13847 Methyltransferase domain CVS48_18825 PF02082 Transcriptional regulator CVS48_18830 PF07804 HipA-like C-terminal domain CVS48_18835 PF13560 Helix-turn-helix domain CVS48_18840 PF02016 LD-carboxypeptidase CVS48_18845 PF01479 S4 domain CVS48_18855 PF11740 CVS48_18855 CVS48_18860 PF00589 Phage integrase family CVS48_18865 PF00990 GGDEF domain CVS48_18865 PF02743 Cache domain CVS48_18870 PF13609 Gram-negative porin CVS48_18875 PF01564 Spermine/spermidine synthase CVS48_18880 PF00440 Bacterial regulatory proteins, tetR family CVS48_18885 PF07080 Protein of unknown function (DUF1348) CVS48_18890 PF12802 MarR family CVS48_18895 PF07690 Major Facilitator Superfamily CVS48_18900 PF10262 Rdx family CVS48_18905 PF07690 Major Facilitator Superfamily CVS48_18910 PF00378 Enoyl-CoA hydratase/isomerase family CVS48_18915 PF02417 CVS48_18915 CVS48_18920 PF02627 Carboxymuconolactone decarboxylase family CVS48_18925 PF00155 Aminotransferase class I and II CVS48_18925 PF00392 Bacterial regulatory proteins, gntR family CVS48_18930 PF00583 Acetyltransferase (GNAT) family CVS48_18935 PF02525 Flavodoxin-like fold CVS48_18945 PF12710 haloacid dehalogenase-like hydrolase CVS48_18950 PF03781 Sulfatase-modifying factor enzyme 1 CVS48_18955 PF00571 CBS domain CVS48_18955 PF03471 Transporter associated domain CVS48_18955 PF03741 CVS48_18955 CVS48_18965 PF13618 CVS48_18965 CVS48_18970 PF00732 GMC oxidoreductase CVS48_18970 PF05199 GMC oxidoreductase CVS48_18975 PF00034 Cytochrome c CVS48_18975 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CVS48_18980 PF05359 CVS48_18980 CVS48_18990 PF00563 EAL domain CVS48_18995 PF12805 CVS48_18995 CVS48_18995 PF13515 CVS48_18995 CVS48_19000 PF00582 Universal stress protein family CVS48_19005 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CVS48_19005 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CVS48_19010 PF11752 CVS48_19010 CVS48_19015 PF01028 Eukaryotic DNA topoisomerase I, catalytic core CVS48_19030 PF05957 CVS48_19030 CVS48_19035 PF05532 CsbD-like CVS48_19040 PF13561 Enoyl-(Acyl carrier protein) reductase CVS48_19055 PF04070 CVS48_19055 CVS48_19070 PF00072 Response regulator receiver domain CVS48_19070 PF00158 Sigma-54 interaction domain CVS48_19070 PF02954 Bacterial regulatory protein, Fis family CVS48_19075 PF00158 Sigma-54 interaction domain CVS48_19075 PF02954 Bacterial regulatory protein, Fis family CVS48_19080 PF00309 CVS48_19080 CVS48_19080 PF04552 Sigma-54, DNA binding domain CVS48_19080 PF04963 Sigma-54 factor, core binding domain CVS48_19090 PF00072 Response regulator receiver domain CVS48_19090 PF00512 His Kinase A (phospho-acceptor) domain CVS48_19090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_19090 PF08447 PAS fold CVS48_19090 PF08448 PAS fold CVS48_19090 PF13185 GAF domain CVS48_19095 PF10087 CVS48_19095 CVS48_19100 PF05247 Flagellar transcriptional activator (FlhD) CVS48_19105 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CVS48_19110 PF07690 Major Facilitator Superfamily CVS48_19115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_19115 PF03466 LysR substrate binding domain CVS48_19120 PF13598 CVS48_19120 CVS48_19120 PF13600 CVS48_19120 CVS48_19125 PF00072 Response regulator receiver domain CVS48_19125 PF00563 EAL domain CVS48_19130 PF00793 DAHP synthetase I family CVS48_19135 PF01266 FAD dependent oxidoreductase CVS48_19140 PF13302 Acetyltransferase (GNAT) domain CVS48_19150 PF00072 Response regulator receiver domain CVS48_19150 PF00486 Transcriptional regulatory protein, C terminal CVS48_19155 PF03328 HpcH/HpaI aldolase/citrate lyase family CVS48_19160 PF00005 ABC transporter CVS48_19160 PF12848 ABC transporter CVS48_19165 PF02666 CVS48_19165 CVS48_19170 PF01070 FMN-dependent dehydrogenase CVS48_19175 PF00149 Calcineurin-like phosphoesterase CVS48_19180 PF01037 AsnC family CVS48_19180 PF13404 AsnC-type helix-turn-helix domain CVS48_19185 PF07690 Major Facilitator Superfamily CVS48_19190 PF03180 NLPA lipoprotein CVS48_19195 PF00491 Arginase family CVS48_19200 PF01614 Bacterial transcriptional regulator CVS48_19200 PF09339 IclR helix-turn-helix domain CVS48_19205 PF13458 Periplasmic binding protein CVS48_19210 PF00107 Zinc-binding dehydrogenase CVS48_19210 PF08240 Alcohol dehydrogenase GroES-like domain CVS48_19215 PF08808 CVS48_19215 CVS48_19220 PF09722 CVS48_19220 CVS48_19225 PF04241 CVS48_19225 CVS48_19230 PF00892 EamA-like transporter family CVS48_19235 PF13409 Glutathione S-transferase, N-terminal domain CVS48_19240 PF07995 Glucose / Sorbosone dehydrogenase CVS48_19245 PF00043 Glutathione S-transferase, C-terminal domain CVS48_19245 PF02798 Glutathione S-transferase, N-terminal domain CVS48_19250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_19250 PF03466 LysR substrate binding domain CVS48_19255 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_19260 PF07969 Amidohydrolase family CVS48_19265 PF01177 Asp/Glu/Hydantoin racemase CVS48_19270 PF00005 ABC transporter CVS48_19275 PF00005 ABC transporter CVS48_19275 PF12399 Branched-chain amino acid ATP-binding cassette transporter CVS48_19280 PF02653 CVS48_19280 CVS48_19280 PF11862 CVS48_19280 CVS48_19285 PF02653 CVS48_19285 CVS48_19290 PF13458 Periplasmic binding protein CVS48_19295 PF02592 CVS48_19295 CVS48_19300 PF03807 NADP oxidoreductase coenzyme F420-dependent CVS48_19300 PF14748 Pyrroline-5-carboxylate reductase dimerisation CVS48_19305 PF13416 Bacterial extracellular solute-binding protein CVS48_19310 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_19315 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_19320 PF00005 ABC transporter CVS48_19320 PF08402 TOBE domain CVS48_19325 PF13458 Periplasmic binding protein CVS48_19330 PF06821 Serine hydrolase CVS48_19335 PF00107 Zinc-binding dehydrogenase CVS48_19335 PF00109 Beta-ketoacyl synthase, N-terminal domain CVS48_19335 PF00550 Phosphopantetheine attachment site CVS48_19335 PF00698 Acyl transferase domain CVS48_19335 PF02801 Beta-ketoacyl synthase, C-terminal domain CVS48_19335 PF08240 Alcohol dehydrogenase GroES-like domain CVS48_19335 PF08659 KR domain CVS48_19335 PF14765 Polyketide synthase dehydratase CVS48_19335 PF16197 CVS48_19335 CVS48_19340 PF00155 Aminotransferase class I and II CVS48_19345 PF00571 CBS domain CVS48_19345 PF01380 SIS domain CVS48_19350 PF05159 CVS48_19350 CVS48_19355 PF05159 CVS48_19355 CVS48_19365 PF00005 ABC transporter CVS48_19370 PF01061 CVS48_19370 CVS48_19375 PF02563 Polysaccharide biosynthesis/export protein CVS48_19375 PF10531 SLBB domain CVS48_19385 PF00884 Sulfatase CVS48_19390 PF00106 short chain dehydrogenase CVS48_19395 PF00210 Ferritin-like domain CVS48_19400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_19400 PF03466 LysR substrate binding domain CVS48_19405 PF00270 DEAD/DEAH box helicase CVS48_19405 PF00271 Helicase conserved C-terminal domain CVS48_19405 PF17191 CVS48_19405 CVS48_19410 PF01042 Endoribonuclease L-PSP CVS48_19415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_19415 PF03466 LysR substrate binding domain CVS48_19420 PF07287 CVS48_19420 CVS48_19430 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_19435 PF00175 Oxidoreductase NAD-binding domain CVS48_19435 PF00970 Oxidoreductase FAD-binding domain CVS48_19440 PF13343 Bacterial extracellular solute-binding protein CVS48_19445 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_19450 PF00005 ABC transporter CVS48_19455 PF02678 Pirin CVS48_19455 PF05726 Pirin C-terminal cupin domain CVS48_19460 PF02678 Pirin CVS48_19465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_19465 PF03466 LysR substrate binding domain CVS48_19470 PF00072 Response regulator receiver domain CVS48_19470 PF00158 Sigma-54 interaction domain CVS48_19470 PF02954 Bacterial regulatory protein, Fis family CVS48_19475 PF00512 His Kinase A (phospho-acceptor) domain CVS48_19475 PF00989 PAS fold CVS48_19475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_19480 PF00120 Glutamine synthetase, catalytic domain CVS48_19480 PF03951 Glutamine synthetase, beta-Grasp domain CVS48_19485 PF04055 Radical SAM superfamily CVS48_19485 PF06969 HemN C-terminal domain CVS48_19490 PF01725 Ham1 family CVS48_19495 PF00563 EAL domain CVS48_19495 PF00571 CBS domain CVS48_19495 PF00990 GGDEF domain CVS48_19505 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CVS48_19505 PF02770 Acyl-CoA dehydrogenase, middle domain CVS48_19505 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CVS48_19510 PF03972 MmgE/PrpD family CVS48_19515 PF01138 3' exoribonuclease family, domain 1 CVS48_19515 PF03725 3' exoribonuclease family, domain 2 CVS48_19520 PF03755 CVS48_19520 CVS48_19520 PF08340 CVS48_19520 CVS48_19525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_19525 PF03466 LysR substrate binding domain CVS48_19530 PF00324 Amino acid permease CVS48_19535 PF01048 Phosphorylase superfamily CVS48_19535 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus CVS48_19545 PF00593 TonB dependent receptor CVS48_19545 PF07715 TonB-dependent Receptor Plug Domain CVS48_19550 PF00877 NlpC/P60 family CVS48_19555 PF00106 short chain dehydrogenase CVS48_19560 PF00034 Cytochrome c CVS48_19560 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CVS48_19565 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CVS48_19570 PF00625 Guanylate kinase CVS48_19575 PF01192 RNA polymerase Rpb6 CVS48_19580 PF02824 TGS domain CVS48_19580 PF04607 Region found in RelA / SpoT proteins CVS48_19580 PF13291 ACT domain CVS48_19580 PF13328 HD domain CVS48_19585 PF00005 ABC transporter CVS48_19590 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_19595 PF00497 Bacterial extracellular solute-binding proteins, family 3 CVS48_19600 PF03417 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase CVS48_19605 PF01968 Hydantoinase/oxoprolinase CVS48_19605 PF02538 CVS48_19605 CVS48_19605 PF05378 CVS48_19605 CVS48_19610 PF13463 Winged helix DNA-binding domain CVS48_19615 PF00293 NUDIX domain CVS48_19615 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain CVS48_19615 PF09297 NADH pyrophosphatase zinc ribbon domain CVS48_19620 PF03480 Bacterial extracellular solute-binding protein, family 7 CVS48_19625 PF04290 CVS48_19625 CVS48_19630 PF06808 CVS48_19630 CVS48_19635 PF13609 Gram-negative porin CVS48_19640 PF07286 Protein of unknown function (DUF1445) CVS48_19645 PF01425 Amidase CVS48_19650 PF11010 CVS48_19650 CVS48_19655 PF06808 CVS48_19655 CVS48_19660 PF04290 CVS48_19660 CVS48_19665 PF03480 Bacterial extracellular solute-binding protein, family 7 CVS48_19670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_19670 PF03466 LysR substrate binding domain CVS48_19675 PF00892 EamA-like transporter family CVS48_19680 PF07055 Enoyl reductase FAD binding domain CVS48_19680 PF12241 Trans-2-enoyl-CoA reductase catalytic region CVS48_19680 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase CVS48_19690 PF12710 haloacid dehalogenase-like hydrolase CVS48_19695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_19695 PF03466 LysR substrate binding domain CVS48_19700 PF00005 ABC transporter CVS48_19700 PF08402 TOBE domain CVS48_19705 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_19710 PF13343 Bacterial extracellular solute-binding protein CVS48_19715 PF00005 ABC transporter CVS48_19720 PF13472 GDSL-like Lipase/Acylhydrolase family CVS48_19725 PF13616 PPIC-type PPIASE domain CVS48_19725 PF13624 SurA N-terminal domain CVS48_19730 PF03009 Glycerophosphoryl diester phosphodiesterase family CVS48_19735 PF04378 Ribosomal RNA small subunit methyltransferase D, RsmJ CVS48_19750 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CVS48_19750 PF07992 Pyridine nucleotide-disulphide oxidoreductase CVS48_19755 PF00462 Glutaredoxin CVS48_19755 PF08534 Redoxin CVS48_19760 PF00403 Heavy-metal-associated domain CVS48_19765 PF00122 E1-E2 ATPase CVS48_19765 PF00403 Heavy-metal-associated domain CVS48_19765 PF00702 haloacid dehalogenase-like hydrolase CVS48_19770 PF00376 MerR family regulatory protein CVS48_19770 PF09278 MerR, DNA binding CVS48_19775 PF05958 tRNA (Uracil-5-)-methyltransferase CVS48_19780 PF07690 Major Facilitator Superfamily CVS48_19785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_19785 PF03466 LysR substrate binding domain CVS48_19790 PF15595 CVS48_19790 CVS48_19795 PF09694 CVS48_19795 CVS48_19805 PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB CVS48_19810 PF01476 LysM domain CVS48_19810 PF01551 Peptidase family M23 CVS48_19815 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) CVS48_19820 PF01975 Survival protein SurE CVS48_19825 PF02660 CVS48_19825 CVS48_19830 PF00814 Glycoprotease family CVS48_19835 PF00860 Permease family CVS48_19845 PF00296 Luciferase-like monooxygenase CVS48_19850 PF00085 Thioredoxin CVS48_19855 PF01205 Uncharacterized protein family UPF0029 CVS48_19855 PF09186 Domain of unknown function (DUF1949) CVS48_19860 PF00497 Bacterial extracellular solute-binding proteins, family 3 CVS48_19865 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_19870 PF09084 NMT1/THI5 like CVS48_19875 PF00005 ABC transporter CVS48_19880 PF00005 ABC transporter CVS48_19880 PF12848 ABC transporter CVS48_19885 PF02016 LD-carboxypeptidase CVS48_19890 PF14437 CVS48_19890 CVS48_19895 PF12710 haloacid dehalogenase-like hydrolase CVS48_19905 PF03334 CVS48_19905 CVS48_19910 PF04066 CVS48_19910 CVS48_19915 PF01899 CVS48_19915 CVS48_19920 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains CVS48_19925 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CVS48_19930 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains CVS48_19930 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CVS48_19930 PF04039 CVS48_19930 CVS48_19930 PF13244 CVS48_19930 CVS48_19935 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_19945 PF00892 EamA-like transporter family CVS48_19950 PF13476 AAA domain CVS48_19955 PF00149 Calcineurin-like phosphoesterase CVS48_19960 PF01266 FAD dependent oxidoreductase CVS48_19965 PF01037 AsnC family CVS48_19965 PF13412 Winged helix-turn-helix DNA-binding CVS48_19970 PF04367 CVS48_19970 CVS48_19975 PF13275 S4 domain CVS48_19980 PF04471 Restriction endonuclease CVS48_19985 PF10861 CVS48_19985 CVS48_19990 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CVS48_19990 PF02770 Acyl-CoA dehydrogenase, middle domain CVS48_19990 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CVS48_19995 PF07992 Pyridine nucleotide-disulphide oxidoreductase CVS48_20000 PF12146 Putative lysophospholipase CVS48_20005 PF01547 Bacterial extracellular solute-binding protein CVS48_20010 PF09928 CVS48_20010 CVS48_20015 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_20020 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_20025 PF00005 ABC transporter CVS48_20025 PF08402 TOBE domain CVS48_20030 PF00005 ABC transporter CVS48_20030 PF08402 TOBE domain CVS48_20040 PF01266 FAD dependent oxidoreductase CVS48_20040 PF16901 CVS48_20040 CVS48_20045 PF01966 HD domain CVS48_20050 PF01965 DJ-1/PfpI family CVS48_20055 PF00107 Zinc-binding dehydrogenase CVS48_20055 PF16884 CVS48_20055 CVS48_20060 PF00440 Bacterial regulatory proteins, tetR family CVS48_20065 PF13437 HlyD family secretion protein CVS48_20065 PF13533 Biotin-lipoyl like CVS48_20070 PF00005 ABC transporter CVS48_20075 PF12698 ABC-2 family transporter protein CVS48_20080 PF02321 Outer membrane efflux protein CVS48_20090 PF04073 Aminoacyl-tRNA editing domain CVS48_20095 PF13515 CVS48_20095 CVS48_20100 PF05742 CVS48_20100 CVS48_20110 PF01124 MAPEG family CVS48_20115 PF02517 CAAX protease self-immunity CVS48_20120 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CVS48_20125 PF12840 Helix-turn-helix domain CVS48_20130 PF00472 RF-1 domain CVS48_20135 PF04055 Radical SAM superfamily CVS48_20135 PF13394 4Fe-4S single cluster domain CVS48_20140 PF01242 6-pyruvoyl tetrahydropterin synthase CVS48_20145 PF12802 MarR family CVS48_20150 PF04632 CVS48_20150 CVS48_20155 PF07869 CVS48_20155 CVS48_20160 PF13437 HlyD family secretion protein CVS48_20160 PF13533 Biotin-lipoyl like CVS48_20165 PF02321 Outer membrane efflux protein CVS48_20175 PF00205 Thiamine pyrophosphate enzyme, central domain CVS48_20175 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CVS48_20175 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CVS48_20180 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_20185 PF13561 Enoyl-(Acyl carrier protein) reductase CVS48_20190 PF01614 Bacterial transcriptional regulator CVS48_20190 PF09339 IclR helix-turn-helix domain CVS48_20195 PF02230 Phospholipase/Carboxylesterase CVS48_20200 PF00324 Amino acid permease CVS48_20210 PF00817 impB/mucB/samB family CVS48_20215 PF02811 PHP domain CVS48_20215 PF07733 Bacterial DNA polymerase III alpha subunit CVS48_20215 PF14579 Helix-hairpin-helix motif CVS48_20220 PF11720 Peptidase inhibitor I78 family CVS48_20225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_20225 PF03466 LysR substrate binding domain CVS48_20230 PF00005 ABC transporter CVS48_20235 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_20240 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_20245 PF00497 Bacterial extracellular solute-binding proteins, family 3 CVS48_20250 PF00155 Aminotransferase class I and II CVS48_20255 PF03737 Demethylmenaquinone methyltransferase CVS48_20265 PF02190 ATP-dependent protease La (LON) domain CVS48_20275 PF06983 3-demethylubiquinone-9 3-methyltransferase CVS48_20280 PF01614 Bacterial transcriptional regulator CVS48_20280 PF09339 IclR helix-turn-helix domain CVS48_20285 PF00732 GMC oxidoreductase CVS48_20285 PF05199 GMC oxidoreductase CVS48_20290 PF00083 Sugar (and other) transporter CVS48_20290 PF07690 Major Facilitator Superfamily CVS48_20295 PF02321 Outer membrane efflux protein CVS48_20300 PF00873 AcrB/AcrD/AcrF family CVS48_20305 PF16576 CVS48_20305 CVS48_20310 PF00440 Bacterial regulatory proteins, tetR family CVS48_20315 PF00248 Aldo/keto reductase family CVS48_20320 PF00144 Beta-lactamase CVS48_20325 PF00266 Aminotransferase class-V CVS48_20330 PF00392 Bacterial regulatory proteins, gntR family CVS48_20330 PF07729 FCD domain CVS48_20335 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CVS48_20340 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_20345 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_20345 PF12911 CVS48_20345 CVS48_20350 PF00005 ABC transporter CVS48_20350 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS48_20355 PF00005 ABC transporter CVS48_20355 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS48_20360 PF01546 Peptidase family M20/M25/M40 CVS48_20360 PF07687 Peptidase dimerisation domain CVS48_20365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_20365 PF03466 LysR substrate binding domain CVS48_20375 PF13650 Aspartyl protease CVS48_20380 PF00440 Bacterial regulatory proteins, tetR family CVS48_20395 PF04463 CVS48_20395 CVS48_20405 PF02311 AraC-like ligand binding domain CVS48_20405 PF12833 Helix-turn-helix domain CVS48_20410 PF01936 NYN domain CVS48_20415 PF01618 CVS48_20415 CVS48_20420 PF00691 OmpA family CVS48_20420 PF13677 CVS48_20420 CVS48_20425 PF03795 YCII-related domain CVS48_20430 PF03869 Arc-like DNA binding domain CVS48_20435 PF01850 PIN domain CVS48_20440 PF03795 YCII-related domain CVS48_20445 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CVS48_20450 PF04542 Sigma-70 region 2 CVS48_20450 PF08281 Sigma-70, region 4 CVS48_20455 PF02311 AraC-like ligand binding domain CVS48_20455 PF12833 Helix-turn-helix domain CVS48_20460 PF00892 EamA-like transporter family CVS48_20465 PF07690 Major Facilitator Superfamily CVS48_20470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_20470 PF03466 LysR substrate binding domain CVS48_20475 PF02596 CVS48_20475 CVS48_20480 PF00665 Integrase core domain CVS48_20480 PF13518 Helix-turn-helix domain CVS48_20485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_20485 PF03466 LysR substrate binding domain CVS48_20490 PF13561 Enoyl-(Acyl carrier protein) reductase CVS48_20495 PF13646 HEAT repeats CVS48_20500 PF01047 MarR family CVS48_20510 PF06808 CVS48_20510 CVS48_20515 PF04290 CVS48_20515 CVS48_20520 PF03480 Bacterial extracellular solute-binding protein, family 7 CVS48_20535 PF11828 CVS48_20535 CVS48_20540 PF05650 CVS48_20540 CVS48_20545 PF00691 OmpA family CVS48_20550 PF11445 CVS48_20550 CVS48_20555 PF04055 Radical SAM superfamily CVS48_20560 PF11903 CVS48_20560 CVS48_20565 PF00557 Metallopeptidase family M24 CVS48_20570 PF05977 Transmembrane secretion effector CVS48_20575 PF00043 Glutathione S-transferase, C-terminal domain CVS48_20575 PF13417 Glutathione S-transferase, N-terminal domain CVS48_20580 PF00080 Copper/zinc superoxide dismutase (SODC) CVS48_20585 PF04286 CVS48_20585 CVS48_20590 PF01594 CVS48_20590 CVS48_20595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_20595 PF03466 LysR substrate binding domain CVS48_20600 PF00378 Enoyl-CoA hydratase/isomerase family CVS48_20600 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CVS48_20600 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CVS48_20605 PF00108 Thiolase, N-terminal domain CVS48_20605 PF02803 Thiolase, C-terminal domain CVS48_20610 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CVS48_20610 PF02770 Acyl-CoA dehydrogenase, middle domain CVS48_20610 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CVS48_20615 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CVS48_20615 PF02770 Acyl-CoA dehydrogenase, middle domain CVS48_20615 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CVS48_20620 PF00501 AMP-binding enzyme CVS48_20620 PF13193 AMP-binding enzyme C-terminal domain CVS48_20625 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_20630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_20630 PF03466 LysR substrate binding domain CVS48_20635 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_20640 PF01546 Peptidase family M20/M25/M40 CVS48_20640 PF07687 Peptidase dimerisation domain CVS48_20645 PF00392 Bacterial regulatory proteins, gntR family CVS48_20645 PF07729 FCD domain CVS48_20650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_20650 PF03466 LysR substrate binding domain CVS48_20655 PF07690 Major Facilitator Superfamily CVS48_20660 PF01053 Cys/Met metabolism PLP-dependent enzyme CVS48_20665 PF00072 Response regulator receiver domain CVS48_20665 PF00990 GGDEF domain CVS48_20670 PF00072 Response regulator receiver domain CVS48_20670 PF01339 CheB methylesterase CVS48_20675 PF00072 Response regulator receiver domain CVS48_20675 PF01584 CheW-like domain CVS48_20675 PF01627 Hpt domain CVS48_20675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_20680 PF01584 CheW-like domain CVS48_20685 PF01739 CheR methyltransferase, SAM binding domain CVS48_20685 PF13181 Tetratricopeptide repeat CVS48_20690 PF01584 CheW-like domain CVS48_20695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CVS48_20695 PF12729 CVS48_20695 CVS48_20700 PF01425 Amidase CVS48_20705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_20705 PF03466 LysR substrate binding domain CVS48_20710 PF07690 Major Facilitator Superfamily CVS48_20715 PF06733 DEAD_2 CVS48_20715 PF13307 Helicase C-terminal domain CVS48_20720 PF08774 VRR-NUC domain CVS48_20730 PF00034 Cytochrome c CVS48_20735 PF00732 GMC oxidoreductase CVS48_20735 PF05199 GMC oxidoreductase CVS48_20740 PF13618 CVS48_20740 CVS48_20750 PF01850 PIN domain CVS48_20755 PF04014 Antidote-toxin recognition MazE CVS48_20760 PF00440 Bacterial regulatory proteins, tetR family CVS48_20760 PF14246 AefR-like transcriptional repressor, C-terminal region CVS48_20765 PF12706 Beta-lactamase superfamily domain CVS48_20770 PF01593 Flavin containing amine oxidoreductase CVS48_20775 PF01361 Tautomerase enzyme CVS48_20780 PF13561 Enoyl-(Acyl carrier protein) reductase CVS48_20785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_20785 PF03466 LysR substrate binding domain CVS48_20790 PF00011 Hsp20/alpha crystallin family CVS48_20795 PF00011 Hsp20/alpha crystallin family CVS48_20800 PF00106 short chain dehydrogenase CVS48_20805 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CVS48_20810 PF00440 Bacterial regulatory proteins, tetR family CVS48_20820 PF02028 BCCT family transporter CVS48_20825 PF00355 Rieske [2Fe-2S] domain CVS48_20825 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CVS48_20830 PF00111 2Fe-2S iron-sulfur cluster binding domain CVS48_20830 PF00175 Oxidoreductase NAD-binding domain CVS48_20835 PF00005 ABC transporter CVS48_20835 PF00664 ABC transporter transmembrane region CVS48_20840 PF12643 CVS48_20840 CVS48_20845 PF13561 Enoyl-(Acyl carrier protein) reductase CVS48_20850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_20850 PF03466 LysR substrate binding domain CVS48_20860 PF00440 Bacterial regulatory proteins, tetR family CVS48_20860 PF16925 CVS48_20860 CVS48_20865 PF00106 short chain dehydrogenase CVS48_20870 PF02798 Glutathione S-transferase, N-terminal domain CVS48_20870 PF13410 Glutathione S-transferase, C-terminal domain CVS48_20875 PF00892 EamA-like transporter family CVS48_20880 PF00561 alpha/beta hydrolase fold CVS48_20885 PF13411 MerR HTH family regulatory protein CVS48_20890 PF08808 CVS48_20890 CVS48_20900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_20900 PF03466 LysR substrate binding domain CVS48_20905 PF03358 NADPH-dependent FMN reductase CVS48_20910 PF08908 CVS48_20910 CVS48_20915 PF01717 Cobalamin-independent synthase, Catalytic domain CVS48_20920 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_20930 PF00117 Glutamine amidotransferase class-I CVS48_20930 PF00958 GMP synthase C terminal domain CVS48_20930 PF02540 NAD synthase CVS48_20935 PF00478 IMP dehydrogenase / GMP reductase domain CVS48_20935 PF00571 CBS domain CVS48_20940 PF09998 CVS48_20940 CVS48_20950 PF04134 CVS48_20950 CVS48_20955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_20955 PF03466 LysR substrate binding domain CVS48_20960 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_20965 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CVS48_20965 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CVS48_20970 PF14430 CVS48_20970 CVS48_20985 PF00111 2Fe-2S iron-sulfur cluster binding domain CVS48_20990 PF00484 Carbonic anhydrase CVS48_20995 PF10503 Esterase PHB depolymerase CVS48_21005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_21005 PF03466 LysR substrate binding domain CVS48_21010 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) CVS48_21015 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_21020 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_21020 PF12911 CVS48_21020 CVS48_21025 PF00005 ABC transporter CVS48_21025 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS48_21030 PF00005 ABC transporter CVS48_21030 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS48_21035 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CVS48_21040 PF04775 Acyl-CoA thioester hydrolase/BAAT N-terminal region CVS48_21040 PF08840 BAAT / Acyl-CoA thioester hydrolase C terminal CVS48_21045 PF02627 Carboxymuconolactone decarboxylase family CVS48_21050 PF13679 CVS48_21050 CVS48_21065 PF13175 AAA ATPase domain CVS48_21070 PF14491 CVS48_21070 CVS48_21075 PF00270 DEAD/DEAH box helicase CVS48_21075 PF00271 Helicase conserved C-terminal domain CVS48_21080 PF08878 CVS48_21080 CVS48_21080 PF14130 CVS48_21080 CVS48_21085 PF00872 CVS48_21085 CVS48_21090 PF01614 Bacterial transcriptional regulator CVS48_21090 PF09339 IclR helix-turn-helix domain CVS48_21095 PF01613 Flavin reductase like domain CVS48_21100 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_21105 PF01042 Endoribonuclease L-PSP CVS48_21110 PF04909 Amidohydrolase CVS48_21115 PF01557 Fumarylacetoacetate (FAA) hydrolase family CVS48_21115 PF10370 Domain of unknown function (DUF2437) CVS48_21120 PF01557 Fumarylacetoacetate (FAA) hydrolase family CVS48_21125 PF03328 HpcH/HpaI aldolase/citrate lyase family CVS48_21130 PF05988 CVS48_21130 CVS48_21135 PF00857 Isochorismatase family CVS48_21165 PF04366 CVS48_21165 CVS48_21170 PF00043 Glutathione S-transferase, C-terminal domain CVS48_21170 PF13417 Glutathione S-transferase, N-terminal domain CVS48_21180 PF01381 Helix-turn-helix CVS48_21185 PF06296 CVS48_21185 CVS48_21190 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CVS48_21200 PF13226 CVS48_21200 CVS48_21205 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CVS48_21210 PF04775 Acyl-CoA thioester hydrolase/BAAT N-terminal region CVS48_21210 PF08840 BAAT / Acyl-CoA thioester hydrolase C terminal CVS48_21215 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_21220 PF06808 CVS48_21220 CVS48_21225 PF04290 CVS48_21225 CVS48_21230 PF03480 Bacterial extracellular solute-binding protein, family 7 CVS48_21235 PF08212 Lipocalin-like domain CVS48_21240 PF02353 Mycolic acid cyclopropane synthetase CVS48_21245 PF06966 CVS48_21245 CVS48_21250 PF02353 Mycolic acid cyclopropane synthetase CVS48_21255 PF07859 alpha/beta hydrolase fold CVS48_21260 PF07209 CVS48_21260 CVS48_21265 PF01546 Peptidase family M20/M25/M40 CVS48_21265 PF07687 Peptidase dimerisation domain CVS48_21270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_21270 PF03466 LysR substrate binding domain CVS48_21275 PF00561 alpha/beta hydrolase fold CVS48_21280 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_21285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CVS48_21285 PF00672 HAMP domain CVS48_21285 PF02203 Tar ligand binding domain homologue CVS48_21290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_21290 PF03466 LysR substrate binding domain CVS48_21295 PF02769 AIR synthase related protein, C-terminal domain CVS48_21295 PF13507 CobB/CobQ-like glutamine amidotransferase domain CVS48_21300 PF04290 CVS48_21300 CVS48_21305 PF06808 CVS48_21305 CVS48_21310 PF03480 Bacterial extracellular solute-binding protein, family 7 CVS48_21315 PF01272 Transcription elongation factor, GreA/GreB, C-term CVS48_21315 PF03449 Transcription elongation factor, N-terminal CVS48_21320 PF02811 PHP domain CVS48_21325 PF12697 Alpha/beta hydrolase family CVS48_21330 PF02353 Mycolic acid cyclopropane synthetase CVS48_21335 PF00732 GMC oxidoreductase CVS48_21335 PF05199 GMC oxidoreductase CVS48_21340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_21340 PF03466 LysR substrate binding domain CVS48_21345 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_21350 PF01266 FAD dependent oxidoreductase CVS48_21355 PF07883 Cupin domain CVS48_21355 PF13560 Helix-turn-helix domain CVS48_21360 PF03358 NADPH-dependent FMN reductase CVS48_21365 PF04120 CVS48_21365 CVS48_21370 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CVS48_21370 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CVS48_21370 PF04324 BFD-like [2Fe-2S] binding domain CVS48_21370 PF07992 Pyridine nucleotide-disulphide oxidoreductase CVS48_21375 PF13806 Rieske-like [2Fe-2S] domain CVS48_21380 PF01226 Formate/nitrite transporter CVS48_21385 PF00069 Protein kinase domain CVS48_21385 PF13672 Protein phosphatase 2C CVS48_21395 PF03861 ANTAR domain CVS48_21395 PF08376 Nitrate and nitrite sensing CVS48_21400 PF07690 Major Facilitator Superfamily CVS48_21405 PF13463 Winged helix DNA-binding domain CVS48_21410 PF00356 Bacterial regulatory proteins, lacI family CVS48_21410 PF13407 Periplasmic binding protein domain CVS48_21415 PF03480 Bacterial extracellular solute-binding protein, family 7 CVS48_21420 PF04290 CVS48_21420 CVS48_21420 PF06808 CVS48_21420 CVS48_21425 PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CVS48_21430 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain CVS48_21430 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain CVS48_21435 PF07005 Protein of unknown function, DUF1537 CVS48_21435 PF17042 CVS48_21435 CVS48_21450 PF05594 CVS48_21450 CVS48_21450 PF05860 haemagglutination activity domain CVS48_21450 PF13332 CVS48_21450 CVS48_21455 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CVS48_21455 PF08479 POTRA domain, ShlB-type CVS48_21455 PF17287 CVS48_21455 CVS48_21465 PF00270 DEAD/DEAH box helicase CVS48_21465 PF00271 Helicase conserved C-terminal domain CVS48_21470 PF08878 CVS48_21470 CVS48_21475 PF04851 Type III restriction enzyme, res subunit CVS48_21480 PF01555 DNA methylase CVS48_21490 PF14022 CVS48_21490 CVS48_21505 PF07042 CVS48_21505 CVS48_21520 PF13540 Regulator of chromosome condensation (RCC1) repeat CVS48_21530 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CVS48_21535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_21535 PF03466 LysR substrate binding domain CVS48_21540 PF00795 Carbon-nitrogen hydrolase CVS48_21545 PF03737 Demethylmenaquinone methyltransferase CVS48_21550 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_21555 PF01527 Transposase CVS48_21575 PF00899 ThiF family CVS48_21580 PF14464 Prokaryotic homologs of the JAB domain CVS48_21585 PF00415 Regulator of chromosome condensation (RCC1) repeat CVS48_21585 PF13540 Regulator of chromosome condensation (RCC1) repeat CVS48_21595 PF08721 TnsA endonuclease C terminal CVS48_21595 PF08722 TnsA endonuclease N terminal CVS48_21600 PF00665 Integrase core domain CVS48_21605 PF05621 CVS48_21605 CVS48_21610 PF06527 CVS48_21610 CVS48_21610 PF15978 CVS48_21610 CVS48_21615 PF13340 CVS48_21615 CVS48_21620 PF05345 Putative Ig domain CVS48_21635 PF03235 CVS48_21635 CVS48_21635 PF07510 CVS48_21635 CVS48_21640 PF13476 AAA domain CVS48_21660 PF13567 CVS48_21660 CVS48_21670 PF01734 Patatin-like phospholipase CVS48_21675 PF13561 Enoyl-(Acyl carrier protein) reductase CVS48_21680 PF12973 ChrR Cupin-like domain CVS48_21685 PF00356 Bacterial regulatory proteins, lacI family CVS48_21685 PF13377 Periplasmic binding protein-like domain CVS48_21690 PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CVS48_21695 PF13561 Enoyl-(Acyl carrier protein) reductase CVS48_21700 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_21705 PF12680 SnoaL-like domain CVS48_21710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_21710 PF03466 LysR substrate binding domain CVS48_21715 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_21720 PF02585 GlcNAc-PI de-N-acetylase CVS48_21725 PF03737 Demethylmenaquinone methyltransferase CVS48_21730 PF12146 Putative lysophospholipase CVS48_21735 PF02110 Hydroxyethylthiazole kinase family CVS48_21740 PF07690 Major Facilitator Superfamily CVS48_21745 PF00005 ABC transporter CVS48_21750 PF01032 FecCD transport family CVS48_21760 PF01497 Periplasmic binding protein CVS48_21765 PF00593 TonB dependent receptor CVS48_21765 PF07715 TonB-dependent Receptor Plug Domain CVS48_21770 PF00072 Response regulator receiver domain CVS48_21770 PF00486 Transcriptional regulatory protein, C terminal CVS48_21775 PF00512 His Kinase A (phospho-acceptor) domain CVS48_21775 PF00672 HAMP domain CVS48_21775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_21780 PF00593 TonB dependent receptor CVS48_21780 PF07715 TonB-dependent Receptor Plug Domain CVS48_21785 PF01026 TatD related DNase CVS48_21790 PF00005 ABC transporter CVS48_21795 PF02687 CVS48_21795 CVS48_21795 PF12704 MacB-like periplasmic core domain CVS48_21805 PF01368 DHH family CVS48_21805 PF02272 DHHA1 domain CVS48_21815 PF00106 short chain dehydrogenase CVS48_21820 PF00152 tRNA synthetases class II (D, K and N) CVS48_21820 PF01336 OB-fold nucleic acid binding domain CVS48_21830 PF00440 Bacterial regulatory proteins, tetR family CVS48_21835 PF00108 Thiolase, N-terminal domain CVS48_21835 PF02803 Thiolase, C-terminal domain CVS48_21840 PF00501 AMP-binding enzyme CVS48_21845 PF00005 ABC transporter CVS48_21850 PF13458 Periplasmic binding protein CVS48_21855 PF02653 CVS48_21855 CVS48_21860 PF02653 CVS48_21860 CVS48_21865 PF00005 ABC transporter CVS48_21865 PF12399 Branched-chain amino acid ATP-binding cassette transporter CVS48_21870 PF00378 Enoyl-CoA hydratase/isomerase family CVS48_21875 PF00378 Enoyl-CoA hydratase/isomerase family CVS48_21880 PF02515 CoA-transferase family III CVS48_21885 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_21890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_21890 PF03466 LysR substrate binding domain CVS48_21900 PF04384 Iron-sulphur cluster assembly CVS48_21905 PF00111 2Fe-2S iron-sulfur cluster binding domain CVS48_21910 PF00012 Hsp70 protein CVS48_21915 PF07743 HSCB C-terminal oligomerisation domain CVS48_21920 PF01521 Iron-sulphur cluster biosynthesis CVS48_21925 PF01592 NifU-like N terminal domain CVS48_21930 PF00266 Aminotransferase class-V CVS48_21935 PF02082 Transcriptional regulator CVS48_21940 PF01451 Low molecular weight phosphotyrosine protein phosphatase CVS48_21945 PF00271 Helicase conserved C-terminal domain CVS48_21945 PF04851 Type III restriction enzyme, res subunit CVS48_21945 PF12344 Ultra-violet resistance protein B CVS48_21950 PF00155 Aminotransferase class I and II CVS48_21955 PF00717 Peptidase S24-like CVS48_21955 PF01726 LexA DNA binding domain CVS48_21960 PF00004 ATPase family associated with various cellular activities (AAA) CVS48_21960 PF02190 ATP-dependent protease La (LON) domain CVS48_21960 PF05362 Lon protease (S16) C-terminal proteolytic domain CVS48_21965 PF06689 ClpX C4-type zinc finger CVS48_21965 PF07724 AAA domain (Cdc48 subfamily) CVS48_21965 PF10431 C-terminal, D2-small domain, of ClpB protein CVS48_21970 PF00574 Clp protease CVS48_21975 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CVS48_21975 PF05697 Bacterial trigger factor protein (TF) CVS48_21975 PF05698 Bacterial trigger factor protein (TF) C-terminus CVS48_21980 PF01435 Peptidase family M48 CVS48_21985 PF03350 CVS48_21985 CVS48_21990 PF00313 'Cold-shock' DNA-binding domain CVS48_22000 PF06041 Bacterial protein of unknown function (DUF924) CVS48_22005 PF00313 'Cold-shock' DNA-binding domain CVS48_22020 PF10711 CVS48_22020 CVS48_22030 PF01168 Alanine racemase, N-terminal domain CVS48_22030 PF14031 Putative serine dehydratase domain CVS48_22035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_22035 PF03466 LysR substrate binding domain CVS48_22040 PF01042 Endoribonuclease L-PSP CVS48_22045 PF07690 Major Facilitator Superfamily CVS48_22050 PF00440 Bacterial regulatory proteins, tetR family CVS48_22055 PF07690 Major Facilitator Superfamily CVS48_22070 PF02470 CVS48_22070 CVS48_22075 PF00583 Acetyltransferase (GNAT) family CVS48_22085 PF00793 DAHP synthetase I family CVS48_22095 PF04309 Glycerol-3-phosphate responsive antiterminator CVS48_22100 PF01565 FAD binding domain CVS48_22100 PF02913 FAD linked oxidases, C-terminal domain CVS48_22105 PF01266 FAD dependent oxidoreductase CVS48_22105 PF16901 CVS48_22105 CVS48_22110 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CVS48_22110 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CVS48_22115 PF00083 Sugar (and other) transporter CVS48_22140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_22140 PF03466 LysR substrate binding domain CVS48_22145 PF02515 CoA-transferase family III CVS48_22150 PF00378 Enoyl-CoA hydratase/isomerase family CVS48_22155 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_22170 PF00155 Aminotransferase class I and II CVS48_22175 PF00132 Bacterial transferase hexapeptide (six repeats) CVS48_22175 PF14602 Hexapeptide repeat of succinyl-transferase CVS48_22175 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CVS48_22180 PF01546 Peptidase family M20/M25/M40 CVS48_22180 PF07687 Peptidase dimerisation domain CVS48_22185 PF05175 Methyltransferase small domain CVS48_22190 PF00005 ABC transporter CVS48_22190 PF12848 ABC transporter CVS48_22195 PF04542 Sigma-70 region 2 CVS48_22195 PF08281 Sigma-70, region 4 CVS48_22200 PF04773 FecR protein CVS48_22200 PF16220 CVS48_22200 CVS48_22205 PF07715 TonB-dependent Receptor Plug Domain CVS48_22210 PF03150 Di-haem cytochrome c peroxidase CVS48_22215 PF01817 Chorismate mutase type II CVS48_22220 PF00580 UvrD/REP helicase N-terminal domain CVS48_22220 PF13361 UvrD-like helicase C-terminal domain CVS48_22225 PF00487 CVS48_22225 CVS48_22225 PF01610 CVS48_22225 CVS48_22235 PF01189 NOL1/NOP2/sun family CVS48_22240 PF00551 Formyl transferase CVS48_22245 PF01687 Riboflavin kinase CVS48_22245 PF06574 FAD synthetase CVS48_22250 PF00133 tRNA synthetases class I (I, L, M and V) CVS48_22250 PF06827 Zinc finger found in FPG and IleRS CVS48_22250 PF08264 Anticodon-binding domain of tRNA CVS48_22255 PF01252 CVS48_22255 CVS48_22260 PF02441 Flavoprotein CVS48_22260 PF04127 DNA / pantothenate metabolism flavoprotein CVS48_22265 PF06675 CVS48_22265 CVS48_22270 PF03575 Peptidase family S51 CVS48_22275 PF01614 Bacterial transcriptional regulator CVS48_22275 PF09339 IclR helix-turn-helix domain CVS48_22280 PF04307 CVS48_22280 CVS48_22285 PF09335 CVS48_22285 CVS48_22295 PF08761 dUTPase CVS48_22300 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CVS48_22305 PF00005 ABC transporter CVS48_22310 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_22315 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_22320 PF00497 Bacterial extracellular solute-binding proteins, family 3 CVS48_22325 PF13458 Periplasmic binding protein CVS48_22330 PF02566 OsmC-like protein CVS48_22335 PF01566 CVS48_22335 CVS48_22345 PF00440 Bacterial regulatory proteins, tetR family CVS48_22350 PF07690 Major Facilitator Superfamily CVS48_22355 PF00005 ABC transporter CVS48_22360 PF00005 ABC transporter CVS48_22360 PF12399 Branched-chain amino acid ATP-binding cassette transporter CVS48_22365 PF02653 CVS48_22365 CVS48_22370 PF02653 CVS48_22370 CVS48_22375 PF13458 Periplasmic binding protein CVS48_22380 PF00171 Aldehyde dehydrogenase family CVS48_22380 PF01619 Proline dehydrogenase CVS48_22380 PF14850 DNA-binding domain of Proline dehydrogenase CVS48_22385 PF03886 Protein of unknown function (DUF330) CVS48_22390 PF02470 CVS48_22390 CVS48_22395 PF04403 CVS48_22395 CVS48_22400 PF00004 ATPase family associated with various cellular activities (AAA) CVS48_22400 PF02861 Clp amino terminal domain CVS48_22400 PF07724 AAA domain (Cdc48 subfamily) CVS48_22400 PF10431 C-terminal, D2-small domain, of ClpB protein CVS48_22405 PF00905 Penicillin binding protein transpeptidase domain CVS48_22405 PF00912 Transglycosylase CVS48_22405 PF06832 CVS48_22405 CVS48_22410 PF00207 Alpha-2-macroglobulin family CVS48_22410 PF01835 MG2 domain CVS48_22410 PF07678 A-macroglobulin complement component CVS48_22410 PF07703 Alpha-2-macroglobulin family N-terminal region CVS48_22410 PF10569 Alpha-macro-globulin thiol-ester bond-forming region CVS48_22410 PF11974 Alpha-2-macroglobulin MG1 domain CVS48_22415 PF02617 ATP-dependent Clp protease adaptor protein ClpS CVS48_22420 PF00313 'Cold-shock' DNA-binding domain CVS48_22425 PF02643 Uncharacterized ACR, COG1430 CVS48_22430 PF00108 Thiolase, N-terminal domain CVS48_22430 PF02803 Thiolase, C-terminal domain CVS48_22435 PF00654 Voltage gated chloride channel CVS48_22445 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CVS48_22445 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CVS48_22450 PF02601 CVS48_22450 CVS48_22450 PF13742 CVS48_22450 CVS48_22455 PF01618 CVS48_22455 CVS48_22460 PF02472 Biopolymer transport protein ExbD/TolR CVS48_22465 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CVS48_22470 PF03966 Trm112p-like protein CVS48_22475 PF02348 Cytidylyltransferase CVS48_22480 PF00406 Adenylate kinase CVS48_22480 PF05191 Adenylate kinase, active site lid CVS48_22485 PF00106 short chain dehydrogenase CVS48_22490 PF03023 CVS48_22490 CVS48_22495 PF04773 FecR protein CVS48_22495 PF16220 CVS48_22495 CVS48_22500 PF01649 Ribosomal protein S20 CVS48_22505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_22505 PF03466 LysR substrate binding domain CVS48_22510 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CVS48_22510 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CVS48_22520 PF03328 HpcH/HpaI aldolase/citrate lyase family CVS48_22525 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_22530 PF02615 Malate/L-lactate dehydrogenase CVS48_22535 PF00392 Bacterial regulatory proteins, gntR family CVS48_22535 PF07729 FCD domain CVS48_22540 PF00701 Dihydrodipicolinate synthetase family CVS48_22545 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_22550 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_22555 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CVS48_22555 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CVS48_22565 PF01925 CVS48_22565 CVS48_22570 PF13481 AAA domain CVS48_22580 PF01047 MarR family CVS48_22585 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CVS48_22590 PF00171 Aldehyde dehydrogenase family CVS48_22595 PF01557 Fumarylacetoacetate (FAA) hydrolase family CVS48_22595 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase CVS48_22600 PF01557 Fumarylacetoacetate (FAA) hydrolase family CVS48_22605 PF01557 Fumarylacetoacetate (FAA) hydrolase family CVS48_22610 PF03328 HpcH/HpaI aldolase/citrate lyase family CVS48_22615 PF13561 Enoyl-(Acyl carrier protein) reductase CVS48_22620 PF00842 Alanine racemase, C-terminal domain CVS48_22620 PF01168 Alanine racemase, N-terminal domain CVS48_22625 PF00494 Squalene/phytoene synthase CVS48_22630 PF00494 Squalene/phytoene synthase CVS48_22635 PF01593 Flavin containing amine oxidoreductase CVS48_22640 PF02537 CVS48_22640 CVS48_22645 PF16357 CVS48_22645 CVS48_22650 PF10029 CVS48_22650 CVS48_22655 PF10670 CVS48_22655 CVS48_22660 PF02424 ApbE family CVS48_22665 PF00175 Oxidoreductase NAD-binding domain CVS48_22665 PF00258 Flavodoxin CVS48_22670 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_22675 PF07969 Amidohydrolase family CVS48_22680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_22680 PF03466 LysR substrate binding domain CVS48_22685 PF09370 TIM-barrel signal transduction protein CVS48_22690 PF06792 Uncharacterised protein family (UPF0261) CVS48_22695 PF00440 Bacterial regulatory proteins, tetR family CVS48_22705 PF00004 ATPase family associated with various cellular activities (AAA) CVS48_22705 PF02861 Clp amino terminal domain CVS48_22705 PF07724 AAA domain (Cdc48 subfamily) CVS48_22705 PF10431 C-terminal, D2-small domain, of ClpB protein CVS48_22710 PF06094 AIG2-like family CVS48_22715 PF00027 Cyclic nucleotide-binding domain CVS48_22715 PF13545 Crp-like helix-turn-helix domain CVS48_22725 PF12840 Helix-turn-helix domain CVS48_22730 PF08327 Activator of Hsp90 ATPase homolog 1-like protein CVS48_22735 PF05988 CVS48_22735 CVS48_22745 PF00111 2Fe-2S iron-sulfur cluster binding domain CVS48_22750 PF00293 NUDIX domain CVS48_22755 PF00012 Hsp70 protein CVS48_22760 PF11319 CVS48_22760 CVS48_22765 PF06744 CVS48_22765 CVS48_22765 PF06761 CVS48_22765 CVS48_22775 PF12843 CVS48_22775 CVS48_22780 PF04170 NlpE N-terminal domain CVS48_22785 PF00497 Bacterial extracellular solute-binding proteins, family 3 CVS48_22790 PF09723 CVS48_22790 CVS48_22795 PF03069 Acetamidase/Formamidase family CVS48_22805 PF00266 Aminotransferase class-V CVS48_22810 PF01037 AsnC family CVS48_22810 PF13412 Winged helix-turn-helix DNA-binding CVS48_22815 PF00005 ABC transporter CVS48_22820 PF13463 Winged helix DNA-binding domain CVS48_22825 PF00005 ABC transporter CVS48_22825 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS48_22830 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CVS48_22835 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_22840 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_22850 PF13673 Acetyltransferase (GNAT) domain CVS48_22855 PF09791 CVS48_22855 CVS48_22860 PF13302 Acetyltransferase (GNAT) domain CVS48_22865 PF01471 Putative peptidoglycan binding domain CVS48_22865 PF13406 Transglycosylase SLT domain CVS48_22870 PF01554 MatE CVS48_22885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_22885 PF03466 LysR substrate binding domain CVS48_22890 PF00962 Adenosine/AMP deaminase CVS48_22895 PF00135 Carboxylesterase family CVS48_22900 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_22905 PF01546 Peptidase family M20/M25/M40 CVS48_22905 PF07687 Peptidase dimerisation domain CVS48_22910 PF01958 Domain of unknown function DUF108 CVS48_22910 PF03447 Homoserine dehydrogenase, NAD binding domain CVS48_22915 PF00005 ABC transporter CVS48_22915 PF06472 CVS48_22915 CVS48_22920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_22920 PF03466 LysR substrate binding domain CVS48_22925 PF04909 Amidohydrolase CVS48_22930 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_22935 PF01479 S4 domain CVS48_22940 PF01253 Translation initiation factor SUI1 CVS48_22945 PF08883 Dopa 4,5-dioxygenase family CVS48_22950 PF03976 Polyphosphate kinase 2 (PPK2) CVS48_22965 PF03653 CVS48_22965 CVS48_22975 PF00005 ABC transporter CVS48_22975 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS48_22980 PF00005 ABC transporter CVS48_22980 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS48_22985 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_22985 PF12911 CVS48_22985 CVS48_22990 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_22995 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CVS48_23000 PF01546 Peptidase family M20/M25/M40 CVS48_23000 PF07687 Peptidase dimerisation domain CVS48_23005 PF07690 Major Facilitator Superfamily CVS48_23010 PF12833 Helix-turn-helix domain CVS48_23010 PF14525 CVS48_23010 CVS48_23015 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain CVS48_23020 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CVS48_23020 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CVS48_23025 PF00144 Beta-lactamase CVS48_23030 PF01266 FAD dependent oxidoreductase CVS48_23035 PF01551 Peptidase family M23 CVS48_23040 PF10282 Lactonase, 7-bladed beta-propeller CVS48_23045 PF01565 FAD binding domain CVS48_23045 PF08031 Berberine and berberine like CVS48_23050 PF01965 DJ-1/PfpI family CVS48_23050 PF12833 Helix-turn-helix domain CVS48_23055 PF07237 Protein of unknown function (DUF1428) CVS48_23060 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CVS48_23065 PF09351 Domain of unknown function (DUF1993) CVS48_23070 PF10503 Esterase PHB depolymerase CVS48_23075 PF03006 CVS48_23075 CVS48_23080 PF02311 AraC-like ligand binding domain CVS48_23080 PF12833 Helix-turn-helix domain CVS48_23085 PF01925 CVS48_23085 CVS48_23090 PF13767 CVS48_23090 CVS48_23095 PF01061 CVS48_23095 CVS48_23100 PF00005 ABC transporter CVS48_23105 PF00701 Dihydrodipicolinate synthetase family CVS48_23110 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CVS48_23110 PF13378 Enolase C-terminal domain-like CVS48_23115 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CVS48_23120 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_23125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_23125 PF03466 LysR substrate binding domain CVS48_23130 PF03831 PhnA protein CVS48_23130 PF08274 PhnA Zinc-Ribbon CVS48_23140 PF05751 CVS48_23140 CVS48_23145 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase CVS48_23145 PF12801 CVS48_23145 CVS48_23145 PF13746 4Fe-4S dicluster domain CVS48_23160 PF02433 Cytochrome C oxidase, mono-heme subunit/FixO CVS48_23165 PF00115 Cytochrome C and Quinol oxidase polypeptide I CVS48_23170 PF03597 CVS48_23170 CVS48_23175 PF00122 E1-E2 ATPase CVS48_23180 PF00202 Aminotransferase class-III CVS48_23185 PF00155 Aminotransferase class I and II CVS48_23190 PF12697 Alpha/beta hydrolase family CVS48_23195 PF13500 AAA domain CVS48_23195 PF13649 Methyltransferase domain CVS48_23205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_23205 PF03466 LysR substrate binding domain CVS48_23210 PF00107 Zinc-binding dehydrogenase CVS48_23210 PF08240 Alcohol dehydrogenase GroES-like domain CVS48_23215 PF00463 Isocitrate lyase family CVS48_23220 PF14489 QueF-like protein CVS48_23220 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term CVS48_23225 PF01546 Peptidase family M20/M25/M40 CVS48_23225 PF07687 Peptidase dimerisation domain CVS48_23230 PF07690 Major Facilitator Superfamily CVS48_23235 PF07690 Major Facilitator Superfamily CVS48_23240 PF01066 CDP-alcohol phosphatidyltransferase CVS48_23245 PF01541 GIY-YIG catalytic domain CVS48_23245 PF02151 UvrB/uvrC motif CVS48_23245 PF08459 UvrC Helix-hairpin-helix N-terminal CVS48_23245 PF14520 Helix-hairpin-helix domain CVS48_23250 PF00933 Glycosyl hydrolase family 3 N terminal domain CVS48_23255 PF01648 4'-phosphopantetheinyl transferase superfamily CVS48_23260 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CVS48_23265 PF02321 Outer membrane efflux protein CVS48_23270 PF00873 AcrB/AcrD/AcrF family CVS48_23275 PF16576 CVS48_23275 CVS48_23280 PF00486 Transcriptional regulatory protein, C terminal CVS48_23285 PF01734 Patatin-like phospholipase CVS48_23285 PF12536 CVS48_23285 CVS48_23290 PF13590 Domain of unknown function (DUF4136) CVS48_23295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_23295 PF03459 TOBE domain CVS48_23300 PF00005 ABC transporter CVS48_23305 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_23310 PF13531 Bacterial extracellular solute-binding protein CVS48_23315 PF02675 S-adenosylmethionine decarboxylase CVS48_23320 PF13785 CVS48_23320 CVS48_23325 PF09851 CVS48_23325 CVS48_23325 PF13421 CVS48_23325 CVS48_23330 PF03994 CVS48_23330 CVS48_23335 PF01564 Spermine/spermidine synthase CVS48_23340 PF13450 NAD(P)-binding Rossmann-like domain CVS48_23345 PF01266 FAD dependent oxidoreductase CVS48_23350 PF00005 ABC transporter CVS48_23355 PF02653 CVS48_23355 CVS48_23360 PF04392 ABC transporter substrate binding protein CVS48_23365 PF00248 Aldo/keto reductase family CVS48_23370 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_23375 PF00501 AMP-binding enzyme CVS48_23375 PF13193 AMP-binding enzyme C-terminal domain CVS48_23380 PF00378 Enoyl-CoA hydratase/isomerase family CVS48_23385 PF05292 Malonyl-CoA decarboxylase (MCD) CVS48_23385 PF17408 CVS48_23385 CVS48_23390 PF00392 Bacterial regulatory proteins, gntR family CVS48_23390 PF07729 FCD domain CVS48_23400 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CVS48_23400 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CVS48_23405 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CVS48_23405 PF02770 Acyl-CoA dehydrogenase, middle domain CVS48_23405 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CVS48_23410 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_23415 PF13380 CoA binding domain CVS48_23415 PF13549 ATP-grasp domain CVS48_23415 PF13607 Succinyl-CoA ligase like flavodoxin domain CVS48_23420 PF00378 Enoyl-CoA hydratase/isomerase family CVS48_23425 PF09339 IclR helix-turn-helix domain CVS48_23430 PF00108 Thiolase, N-terminal domain CVS48_23430 PF02803 Thiolase, C-terminal domain CVS48_23435 PF00378 Enoyl-CoA hydratase/isomerase family CVS48_23440 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CVS48_23440 PF02770 Acyl-CoA dehydrogenase, middle domain CVS48_23440 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CVS48_23445 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CVS48_23445 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CVS48_23450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_23450 PF03466 LysR substrate binding domain CVS48_23455 PF00571 CBS domain CVS48_23460 PF01925 CVS48_23460 CVS48_23475 PF00330 Aconitase family (aconitate hydratase) CVS48_23475 PF06434 Aconitate hydratase 2 N-terminus CVS48_23475 PF11791 Aconitate B N-terminal domain CVS48_23485 PF05973 CVS48_23485 CVS48_23490 PF13744 Helix-turn-helix domain CVS48_23495 PF00593 TonB dependent receptor CVS48_23495 PF07715 TonB-dependent Receptor Plug Domain CVS48_23505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_23505 PF03466 LysR substrate binding domain CVS48_23510 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_23515 PF00501 AMP-binding enzyme CVS48_23515 PF13193 AMP-binding enzyme C-terminal domain CVS48_23520 PF13561 Enoyl-(Acyl carrier protein) reductase CVS48_23525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_23525 PF03466 LysR substrate binding domain CVS48_23530 PF00330 Aconitase family (aconitate hydratase) CVS48_23530 PF00694 Aconitase C-terminal domain CVS48_23535 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CVS48_23540 PF11062 CVS48_23540 CVS48_23545 PF10093 CVS48_23545 CVS48_23550 PF01132 Elongation factor P (EF-P) OB domain CVS48_23550 PF08207 Elongation factor P (EF-P) KOW-like domain CVS48_23550 PF09285 Elongation factor P, C-terminal CVS48_23555 PF06676 CVS48_23555 CVS48_23560 PF11180 CVS48_23560 CVS48_23565 PF00158 Sigma-54 interaction domain CVS48_23565 PF02954 Bacterial regulatory protein, Fis family CVS48_23570 PF09977 CVS48_23570 CVS48_23575 PF12266 CVS48_23575 CVS48_23585 PF00482 Type II secretion system (T2SS), protein F CVS48_23590 PF00482 Type II secretion system (T2SS), protein F CVS48_23595 PF00437 Type II/IV secretion system protein CVS48_23605 PF00263 CVS48_23605 CVS48_23605 PF13629 CVS48_23605 CVS48_23610 PF08666 SAF domain CVS48_23610 PF16976 CVS48_23610 CVS48_23615 PF07811 CVS48_23615 CVS48_23620 PF07811 CVS48_23620 CVS48_23625 PF01478 Type IV leader peptidase family CVS48_23630 PF04964 CVS48_23630 CVS48_23635 PF03707 CVS48_23635 CVS48_23640 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CVS48_23640 PF08479 POTRA domain, ShlB-type CVS48_23645 PF15984 CVS48_23645 CVS48_23650 PF12802 MarR family CVS48_23655 PF00005 ABC transporter CVS48_23655 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS48_23660 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_23665 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_23670 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CVS48_23675 PF00565 Staphylococcal nuclease homologue CVS48_23680 PF01544 CorA-like Mg2+ transporter protein CVS48_23685 PF00580 UvrD/REP helicase N-terminal domain CVS48_23685 PF13361 UvrD-like helicase C-terminal domain CVS48_23690 PF01904 Protein of unknown function DUF72 CVS48_23695 PF00155 Aminotransferase class I and II CVS48_23695 PF00392 Bacterial regulatory proteins, gntR family CVS48_23700 PF00202 Aminotransferase class-III CVS48_23705 PF00171 Aldehyde dehydrogenase family CVS48_23710 PF00459 Inositol monophosphatase family CVS48_23715 PF02146 Sir2 family CVS48_23720 PF00132 Bacterial transferase hexapeptide (six repeats) CVS48_23725 PF16363 CVS48_23725 CVS48_23730 PF00342 Phosphoglucose isomerase CVS48_23735 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CVS48_23735 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CVS48_23735 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CVS48_23735 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CVS48_23740 PF02706 Chain length determinant protein CVS48_23740 PF13614 AAA domain CVS48_23740 PF13807 CVS48_23740 CVS48_23745 PF02563 Polysaccharide biosynthesis/export protein CVS48_23745 PF10531 SLBB domain CVS48_23750 PF02397 CVS48_23750 CVS48_23750 PF13727 CoA-binding domain CVS48_23755 PF00293 NUDIX domain CVS48_23760 PF00483 Nucleotidyl transferase CVS48_23760 PF01050 Mannose-6-phosphate isomerase CVS48_23770 PF16363 CVS48_23770 CVS48_23775 PF01370 NAD dependent epimerase/dehydratase family CVS48_23780 PF01943 CVS48_23780 CVS48_23785 PF00535 Glycosyl transferase family 2 CVS48_23790 PF04932 CVS48_23790 CVS48_23795 PF00534 Glycosyl transferases group 1 CVS48_23795 PF13439 Glycosyltransferase Family 4 CVS48_23800 PF00535 Glycosyl transferase family 2 CVS48_23805 PF00132 Bacterial transferase hexapeptide (six repeats) CVS48_23810 PF13579 Glycosyl transferase 4-like domain CVS48_23810 PF13692 Glycosyl transferases group 1 CVS48_23815 PF00665 Integrase core domain CVS48_23815 PF13518 Helix-turn-helix domain CVS48_23820 PF00196 Bacterial regulatory proteins, luxR family CVS48_23825 PF00196 Bacterial regulatory proteins, luxR family CVS48_23835 PF00440 Bacterial regulatory proteins, tetR family CVS48_23840 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CVS48_23840 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CVS48_23840 PF09317 CVS48_23840 CVS48_23845 PF00108 Thiolase, N-terminal domain CVS48_23845 PF02803 Thiolase, C-terminal domain CVS48_23850 PF00378 Enoyl-CoA hydratase/isomerase family CVS48_23850 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CVS48_23850 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CVS48_23855 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) CVS48_23860 PF00378 Enoyl-CoA hydratase/isomerase family CVS48_23860 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CVS48_23860 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CVS48_23865 PF00108 Thiolase, N-terminal domain CVS48_23865 PF02803 Thiolase, C-terminal domain CVS48_23870 PF14539 Domain of unknown function (DUF4442) CVS48_23875 PF16036 CVS48_23875 CVS48_23880 PF00501 AMP-binding enzyme CVS48_23880 PF13193 AMP-binding enzyme C-terminal domain CVS48_23885 PF00884 Sulfatase CVS48_23890 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_23895 PF01047 MarR family CVS48_23900 PF00593 TonB dependent receptor CVS48_23900 PF07715 TonB-dependent Receptor Plug Domain CVS48_23905 PF03812 CVS48_23905 CVS48_23910 PF07005 Protein of unknown function, DUF1537 CVS48_23910 PF17042 CVS48_23910 CVS48_23915 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CVS48_23920 PF00392 Bacterial regulatory proteins, gntR family CVS48_23920 PF07702 UTRA domain CVS48_23925 PF00440 Bacterial regulatory proteins, tetR family CVS48_23930 PF02321 Outer membrane efflux protein CVS48_23935 PF13437 HlyD family secretion protein CVS48_23935 PF13533 Biotin-lipoyl like CVS48_23940 PF00005 ABC transporter CVS48_23940 PF12698 ABC-2 family transporter protein CVS48_23945 PF12698 ABC-2 family transporter protein CVS48_23950 PF00501 AMP-binding enzyme CVS48_23950 PF13193 AMP-binding enzyme C-terminal domain CVS48_23955 PF01144 Coenzyme A transferase CVS48_23960 PF01144 Coenzyme A transferase CVS48_23965 PF00378 Enoyl-CoA hydratase/isomerase family CVS48_23970 PF02515 CoA-transferase family III CVS48_23975 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_23980 PF13454 FAD-NAD(P)-binding CVS48_23985 PF01614 Bacterial transcriptional regulator CVS48_23985 PF09339 IclR helix-turn-helix domain CVS48_23990 PF05995 Cysteine dioxygenase type I CVS48_23995 PF02146 Sir2 family CVS48_24000 PF13560 Helix-turn-helix domain CVS48_24025 PF00581 Rhodanese-like domain CVS48_24035 PF00696 Amino acid kinase family CVS48_24035 PF01842 ACT domain CVS48_24035 PF13840 ACT domain CVS48_24040 PF01171 PP-loop family CVS48_24040 PF09179 TilS substrate binding domain CVS48_24045 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CVS48_24050 PF00730 HhH-GPD superfamily base excision DNA repair protein CVS48_24055 PF01406 tRNA synthetases class I (C) catalytic domain CVS48_24055 PF09190 DALR domain CVS48_24060 PF14559 Tetratricopeptide repeat CVS48_24065 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CVS48_24070 PF00149 Calcineurin-like phosphoesterase CVS48_24075 PF02673 CVS48_24075 CVS48_24080 PF03471 Transporter associated domain CVS48_24080 PF03741 CVS48_24080 CVS48_24085 PF00459 Inositol monophosphatase family CVS48_24090 PF00588 SpoU rRNA Methylase family CVS48_24095 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_24100 PF01614 Bacterial transcriptional regulator CVS48_24100 PF09339 IclR helix-turn-helix domain CVS48_24105 PF00924 Mechanosensitive ion channel CVS48_24105 PF05552 Conserved TM helix CVS48_24110 PF07433 CVS48_24110 CVS48_24115 PF09375 Imelysin CVS48_24120 PF06537 CVS48_24120 CVS48_24125 PF09375 Imelysin CVS48_24130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_24130 PF03466 LysR substrate binding domain CVS48_24135 PF00596 Class II Aldolase and Adducin N-terminal domain CVS48_24140 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_24145 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CVS48_24150 PF09084 NMT1/THI5 like CVS48_24155 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_24160 PF00005 ABC transporter CVS48_24165 PF13318 CVS48_24165 CVS48_24170 PF01425 Amidase CVS48_24175 PF00392 Bacterial regulatory proteins, gntR family CVS48_24175 PF07729 FCD domain CVS48_24185 PF11533 Protein of unknown function (DUF3225) CVS48_24190 PF03358 NADPH-dependent FMN reductase CVS48_24195 PF07311 Dodecin CVS48_24205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_24205 PF03466 LysR substrate binding domain CVS48_24210 PF00106 short chain dehydrogenase CVS48_24215 PF08240 Alcohol dehydrogenase GroES-like domain CVS48_24215 PF13602 Zinc-binding dehydrogenase CVS48_24225 PF01263 Aldose 1-epimerase CVS48_24230 PF06267 Family of unknown function (DUF1028) CVS48_24235 PF01042 Endoribonuclease L-PSP CVS48_24245 PF00474 Sodium:solute symporter family CVS48_24250 PF11755 CVS48_24250 CVS48_24255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_24255 PF03466 LysR substrate binding domain CVS48_24270 PF01381 Helix-turn-helix CVS48_24280 PF02586 Uncharacterised ACR, COG2135 CVS48_24300 PF12244 CVS48_24300 CVS48_24335 PF09327 CVS48_24335 CVS48_24335 PF13550 CVS48_24335 CVS48_24340 PF06805 CVS48_24340 CVS48_24345 PF00877 NlpC/P60 family CVS48_24345 PF14464 Prokaryotic homologs of the JAB domain CVS48_24350 PF05100 CVS48_24350 CVS48_24365 PF05939 CVS48_24365 CVS48_24370 PF06791 CVS48_24370 CVS48_24370 PF09718 CVS48_24370 CVS48_24375 PF08809 CVS48_24375 CVS48_24405 PF03864 Phage major capsid protein E CVS48_24410 PF02924 Bacteriophage lambda head decoration protein D CVS48_24415 PF00574 Clp protease CVS48_24420 PF05136 CVS48_24420 CVS48_24430 PF05876 CVS48_24430 CVS48_24435 PF00069 Protein kinase domain CVS48_24460 PF13481 AAA domain CVS48_24485 PF05930 Prophage CP4-57 regulatory protein (AlpA) CVS48_24490 PF00589 Phage integrase family CVS48_24490 PF13356 Domain of unknown function (DUF4102) CVS48_24495 PF07471 Phage DNA packaging protein Nu1 CVS48_24510 PF00072 Response regulator receiver domain CVS48_24520 PF00816 H-NS histone family CVS48_24545 PF00772 DnaB-like helicase N terminal domain CVS48_24545 PF03796 DnaB-like helicase C terminal domain CVS48_24550 PF13730 CVS48_24550 CVS48_24555 PF07102 Protein of unknown function (DUF1364) CVS48_24570 PF06892 CVS48_24570 CVS48_24580 PF15943 CVS48_24580 CVS48_24585 PF00717 Peptidase S24-like CVS48_24605 PF01844 HNH endonuclease CVS48_24615 PF04381 Putative exonuclease, RdgC CVS48_24645 PF05930 Prophage CP4-57 regulatory protein (AlpA) CVS48_24650 PF00589 Phage integrase family CVS48_24650 PF13356 Domain of unknown function (DUF4102) CVS48_24655 PF00488 MutS domain V CVS48_24655 PF01624 MutS domain I CVS48_24655 PF05188 MutS domain II CVS48_24655 PF05190 MutS family domain IV CVS48_24655 PF05192 MutS domain III CVS48_24660 PF08007 Cupin superfamily protein CVS48_24670 PF06804 NlpB/DapX lipoprotein CVS48_24675 PF00701 Dihydrodipicolinate synthetase family CVS48_24685 PF01300 Telomere recombination CVS48_24690 PF04228 CVS48_24690 CVS48_24715 PF12840 Helix-turn-helix domain CVS48_24720 PF07690 Major Facilitator Superfamily CVS48_24725 PF04299 Putative FMN-binding domain CVS48_24735 PF13387 CVS48_24735 CVS48_24745 PF02627 Carboxymuconolactone decarboxylase family CVS48_24780 PF11041 CVS48_24780 CVS48_24825 PF11681 CVS48_24825 CVS48_24830 PF11863 CVS48_24830 CVS48_24855 PF07120 CVS48_24855 CVS48_24860 PF15943 CVS48_24860 CVS48_24870 PF09537 Domain of unknown function (DUF2383) CVS48_24895 PF13091 PLD-like domain CVS48_24895 PF13396 CVS48_24895 CVS48_24900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_24900 PF03466 LysR substrate binding domain CVS48_24905 PF00378 Enoyl-CoA hydratase/isomerase family CVS48_24910 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_24915 PF02515 CoA-transferase family III CVS48_24920 PF03061 Thioesterase superfamily CVS48_24925 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CVS48_24925 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CVS48_24930 PF07690 Major Facilitator Superfamily CVS48_24935 PF00392 Bacterial regulatory proteins, gntR family CVS48_24935 PF07729 FCD domain CVS48_24940 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_24945 PF01019 Gamma-glutamyltranspeptidase CVS48_24950 PF00072 Response regulator receiver domain CVS48_24950 PF00196 Bacterial regulatory proteins, luxR family CVS48_24955 PF01627 Hpt domain CVS48_24960 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CVS48_24960 PF08479 POTRA domain, ShlB-type CVS48_24965 PF05860 haemagglutination activity domain CVS48_24965 PF13018 CVS48_24965 CVS48_24975 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CVS48_24975 PF02753 Pili assembly chaperone PapD, C-terminal domain CVS48_24980 PF00577 Outer membrane usher protein CVS48_24980 PF13953 PapC C-terminal domain CVS48_24980 PF13954 PapC N-terminal domain CVS48_24985 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CVS48_24985 PF02753 Pili assembly chaperone PapD, C-terminal domain CVS48_24995 PF07690 Major Facilitator Superfamily CVS48_25000 PF13609 Gram-negative porin CVS48_25005 PF00111 2Fe-2S iron-sulfur cluster binding domain CVS48_25010 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CVS48_25015 PF00171 Aldehyde dehydrogenase family CVS48_25020 PF00205 Thiamine pyrophosphate enzyme, central domain CVS48_25020 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CVS48_25020 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CVS48_25025 PF00106 short chain dehydrogenase CVS48_25030 PF13561 Enoyl-(Acyl carrier protein) reductase CVS48_25035 PF00355 Rieske [2Fe-2S] domain CVS48_25045 PF01614 Bacterial transcriptional regulator CVS48_25045 PF09339 IclR helix-turn-helix domain CVS48_25050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_25050 PF03466 LysR substrate binding domain CVS48_25055 PF02627 Carboxymuconolactone decarboxylase family CVS48_25060 PF00171 Aldehyde dehydrogenase family CVS48_25065 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CVS48_25065 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CVS48_25070 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_25075 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CVS48_25075 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CVS48_25080 PF00941 FAD binding domain in molybdopterin dehydrogenase CVS48_25080 PF03450 CO dehydrogenase flavoprotein C-terminal domain CVS48_25085 PF00111 2Fe-2S iron-sulfur cluster binding domain CVS48_25085 PF01799 [2Fe-2S] binding domain CVS48_25090 PF02625 XdhC and CoxI family CVS48_25090 PF13478 XdhC Rossmann domain CVS48_25095 PF12804 MobA-like NTP transferase domain CVS48_25100 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_25105 PF13380 CoA binding domain CVS48_25105 PF13549 ATP-grasp domain CVS48_25105 PF13607 Succinyl-CoA ligase like flavodoxin domain CVS48_25110 PF00378 Enoyl-CoA hydratase/isomerase family CVS48_25115 PF01614 Bacterial transcriptional regulator CVS48_25115 PF09339 IclR helix-turn-helix domain CVS48_25120 PF01979 Amidohydrolase family CVS48_25135 PF03480 Bacterial extracellular solute-binding protein, family 7 CVS48_25140 PF01614 Bacterial transcriptional regulator CVS48_25140 PF09339 IclR helix-turn-helix domain CVS48_25145 PF01614 Bacterial transcriptional regulator CVS48_25145 PF09339 IclR helix-turn-helix domain CVS48_25150 PF03480 Bacterial extracellular solute-binding protein, family 7 CVS48_25155 PF01220 Dehydroquinase class II CVS48_25160 PF04290 CVS48_25160 CVS48_25165 PF06808 CVS48_25165 CVS48_25170 PF00775 Dioxygenase CVS48_25170 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal CVS48_25175 PF00775 Dioxygenase CVS48_25180 PF00206 Lyase CVS48_25180 PF10397 Adenylosuccinate lyase C-terminus CVS48_25185 PF07927 YcfA-like protein CVS48_25185 PF15919 CVS48_25185 CVS48_25190 PF00313 'Cold-shock' DNA-binding domain CVS48_25215 PF03060 Nitronate monooxygenase CVS48_25220 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_25225 PF02515 CoA-transferase family III CVS48_25230 PF00378 Enoyl-CoA hydratase/isomerase family CVS48_25235 PF12802 MarR family CVS48_25240 PF00682 HMGL-like CVS48_25245 PF00501 AMP-binding enzyme CVS48_25245 PF13193 AMP-binding enzyme C-terminal domain CVS48_25250 PF00378 Enoyl-CoA hydratase/isomerase family CVS48_25260 PF00593 TonB dependent receptor CVS48_25260 PF07715 TonB-dependent Receptor Plug Domain CVS48_25265 PF04773 FecR protein CVS48_25265 PF16220 CVS48_25265 CVS48_25270 PF04542 Sigma-70 region 2 CVS48_25270 PF08281 Sigma-70, region 4 CVS48_25300 PF07883 Cupin domain CVS48_25300 PF13560 Helix-turn-helix domain CVS48_25305 PF01266 FAD dependent oxidoreductase CVS48_25310 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_25315 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_25320 PF00497 Bacterial extracellular solute-binding proteins, family 3 CVS48_25325 PF00005 ABC transporter CVS48_25330 PF00171 Aldehyde dehydrogenase family CVS48_25335 PF02253 Phospholipase A1 CVS48_25340 PF02423 Ornithine cyclodeaminase/mu-crystallin family CVS48_25345 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_25350 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_25350 PF12911 CVS48_25350 CVS48_25355 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CVS48_25360 PF01979 Amidohydrolase family CVS48_25365 PF00005 ABC transporter CVS48_25365 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS48_25370 PF01177 Asp/Glu/Hydantoin racemase CVS48_25375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_25375 PF03466 LysR substrate binding domain CVS48_25380 PF00795 Carbon-nitrogen hydrolase CVS48_25385 PF01979 Amidohydrolase family CVS48_25390 PF00989 PAS fold CVS48_25390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_25390 PF07730 Histidine kinase CVS48_25395 PF00072 Response regulator receiver domain CVS48_25395 PF00196 Bacterial regulatory proteins, luxR family CVS48_25400 PF13379 NMT1-like family CVS48_25405 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_25410 PF00005 ABC transporter CVS48_25415 PF02560 Cyanate lyase C-terminal domain CVS48_25420 PF08543 Phosphomethylpyrimidine kinase CVS48_25430 PF09722 CVS48_25430 CVS48_25435 PF00639 PPIC-type PPIASE domain CVS48_25440 PF10722 Putative bacterial sensory transduction regulator CVS48_25450 PF16930 CVS48_25450 CVS48_25455 PF13103 TonB C terminal CVS48_25460 PF02472 Biopolymer transport protein ExbD/TolR CVS48_25465 PF01618 CVS48_25465 CVS48_25465 PF10102 CVS48_25465 CVS48_25465 PF13385 Concanavalin A-like lectin/glucanases superfamily CVS48_25470 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CVS48_25470 PF08479 POTRA domain, ShlB-type CVS48_25475 PF05860 haemagglutination activity domain CVS48_25475 PF12545 CVS48_25475 CVS48_25480 PF04773 FecR protein CVS48_25480 PF16220 CVS48_25480 CVS48_25485 PF04542 Sigma-70 region 2 CVS48_25485 PF08281 Sigma-70, region 4 CVS48_25490 PF07660 Secretin and TonB N terminus short domain CVS48_25500 PF05899 Protein of unknown function (DUF861) CVS48_25505 PF01381 Helix-turn-helix CVS48_25505 PF07883 Cupin domain CVS48_25510 PF00596 Class II Aldolase and Adducin N-terminal domain CVS48_25515 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_25525 PF05598 CVS48_25525 CVS48_25525 PF13751 CVS48_25525 CVS48_25530 PF08378 CVS48_25530 CVS48_25540 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_25545 PF02515 CoA-transferase family III CVS48_25550 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain CVS48_25550 PF00364 Biotin-requiring enzyme CVS48_25550 PF01039 Carboxyl transferase domain CVS48_25550 PF02785 Biotin carboxylase C-terminal domain CVS48_25550 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CVS48_25555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_25555 PF03466 LysR substrate binding domain CVS48_25560 PF01796 CVS48_25560 CVS48_25560 PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) CVS48_25570 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CVS48_25570 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CVS48_25575 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_25580 PF00107 Zinc-binding dehydrogenase CVS48_25580 PF08240 Alcohol dehydrogenase GroES-like domain CVS48_25600 PF00011 Hsp20/alpha crystallin family CVS48_25605 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CVS48_25610 PF01810 CVS48_25610 CVS48_25615 PF08281 Sigma-70, region 4 CVS48_25620 PF04773 FecR protein CVS48_25620 PF16220 CVS48_25620 CVS48_25620 PF16344 CVS48_25620 CVS48_25625 PF00593 TonB dependent receptor CVS48_25625 PF07660 Secretin and TonB N terminus short domain CVS48_25625 PF07715 TonB-dependent Receptor Plug Domain CVS48_25630 PF00072 Response regulator receiver domain CVS48_25630 PF00196 Bacterial regulatory proteins, luxR family CVS48_25635 PF07695 CVS48_25635 CVS48_25650 PF00107 Zinc-binding dehydrogenase CVS48_25650 PF08240 Alcohol dehydrogenase GroES-like domain CVS48_25650 PF13823 Alcohol dehydrogenase GroES-associated CVS48_25660 PF16363 CVS48_25660 CVS48_25665 PF00534 Glycosyl transferases group 1 CVS48_25670 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CVS48_25675 PF00535 Glycosyl transferase family 2 CVS48_25680 PF02543 Carbamoyltransferase CVS48_25680 PF16861 CVS48_25680 CVS48_25685 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CVS48_25690 PF13242 HAD-hyrolase-like CVS48_25695 PF00106 short chain dehydrogenase CVS48_25700 PF00534 Glycosyl transferases group 1 CVS48_25700 PF13439 Glycosyltransferase Family 4 CVS48_25705 PF00005 ABC transporter CVS48_25705 PF00072 Response regulator receiver domain CVS48_25705 PF00664 ABC transporter transmembrane region CVS48_25715 PF00535 Glycosyl transferase family 2 CVS48_25720 PF02585 GlcNAc-PI de-N-acetylase CVS48_25725 PF00072 Response regulator receiver domain CVS48_25725 PF00512 His Kinase A (phospho-acceptor) domain CVS48_25725 PF01339 CheB methylesterase CVS48_25725 PF01739 CheR methyltransferase, SAM binding domain CVS48_25725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_25725 PF03705 CheR methyltransferase, all-alpha domain CVS48_25725 PF13426 PAS domain CVS48_25725 PF13596 PAS domain CVS48_25740 PF02540 NAD synthase CVS48_25745 PF00483 Nucleotidyl transferase CVS48_25750 PF05067 Manganese containing catalase CVS48_25765 PF10002 CVS48_25765 CVS48_25775 PF01339 CheB methylesterase CVS48_25790 PF01339 CheB methylesterase CVS48_25795 PF05598 CVS48_25795 CVS48_25795 PF13751 CVS48_25795 CVS48_25805 PF00072 Response regulator receiver domain CVS48_25810 PF00924 Mechanosensitive ion channel CVS48_25820 PF02464 Competence-damaged protein CVS48_25825 PF00561 alpha/beta hydrolase fold CVS48_25830 PF01272 Transcription elongation factor, GreA/GreB, C-term CVS48_25835 PF00775 Dioxygenase CVS48_25840 PF00775 Dioxygenase CVS48_25840 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal CVS48_25845 PF02558 Ketopantoate reductase PanE/ApbA CVS48_25845 PF08546 Ketopantoate reductase PanE/ApbA C terminal CVS48_25850 PF07690 Major Facilitator Superfamily CVS48_25855 PF01494 FAD binding domain CVS48_25860 PF00171 Aldehyde dehydrogenase family CVS48_25865 PF00205 Thiamine pyrophosphate enzyme, central domain CVS48_25865 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CVS48_25865 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CVS48_25870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_25870 PF03466 LysR substrate binding domain CVS48_25875 PF00501 AMP-binding enzyme CVS48_25875 PF13193 AMP-binding enzyme C-terminal domain CVS48_25880 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CVS48_25880 PF02770 Acyl-CoA dehydrogenase, middle domain CVS48_25880 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CVS48_25885 PF13561 Enoyl-(Acyl carrier protein) reductase CVS48_25890 PF00108 Thiolase, N-terminal domain CVS48_25890 PF02803 Thiolase, C-terminal domain CVS48_25895 PF12625 CVS48_25895 CVS48_25895 PF12833 Helix-turn-helix domain CVS48_25900 PF02515 CoA-transferase family III CVS48_25905 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_25910 PF01361 Tautomerase enzyme CVS48_25915 PF00005 ABC transporter CVS48_25920 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_25925 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CVS48_25930 PF02353 Mycolic acid cyclopropane synthetase CVS48_25935 PF07690 Major Facilitator Superfamily CVS48_25940 PF00830 Ribosomal L28 family CVS48_25945 PF00471 Ribosomal protein L33 CVS48_25950 PF13458 Periplasmic binding protein CVS48_25955 PF02653 CVS48_25955 CVS48_25960 PF00005 ABC transporter CVS48_25960 PF12399 Branched-chain amino acid ATP-binding cassette transporter CVS48_25965 PF00916 CVS48_25965 CVS48_25965 PF01740 STAS domain CVS48_25970 PF01814 Hemerythrin HHE cation binding domain CVS48_25975 PF00768 D-alanyl-D-alanine carboxypeptidase CVS48_25975 PF07943 Penicillin-binding protein 5, C-terminal domain CVS48_25980 PF00216 Bacterial DNA-binding protein CVS48_25985 PF01047 MarR family CVS48_25990 PF07690 Major Facilitator Superfamily CVS48_25995 PF00133 tRNA synthetases class I (I, L, M and V) CVS48_25995 PF08264 Anticodon-binding domain of tRNA CVS48_25995 PF09334 tRNA synthetases class I (M) CVS48_25995 PF13603 Leucyl-tRNA synthetase, Domain 2 CVS48_26000 PF04390 Lipopolysaccharide-assembly CVS48_26005 PF06144 DNA polymerase III, delta subunit CVS48_26010 PF00171 Aldehyde dehydrogenase family CVS48_26020 PF01557 Fumarylacetoacetate (FAA) hydrolase family CVS48_26025 PF01425 Amidase CVS48_26030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_26030 PF03466 LysR substrate binding domain CVS48_26035 PF07690 Major Facilitator Superfamily CVS48_26040 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CVS48_26040 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CVS48_26045 PF14542 GCN5-related N-acetyl-transferase CVS48_26055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_26055 PF03466 LysR substrate binding domain CVS48_26060 PF13419 Haloacid dehalogenase-like hydrolase CVS48_26065 PF00596 Class II Aldolase and Adducin N-terminal domain CVS48_26095 PF10150 Ribonuclease E/G family CVS48_26100 PF11254 CVS48_26100 CVS48_26105 PF00990 GGDEF domain CVS48_26105 PF02743 Cache domain CVS48_26115 PF00999 Sodium/hydrogen exchanger family CVS48_26115 PF02254 TrkA-N domain CVS48_26120 PF00005 ABC transporter CVS48_26120 PF00664 ABC transporter transmembrane region CVS48_26125 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CVS48_26130 PF02698 DUF218 domain CVS48_26135 PF03692 CVS48_26135 CVS48_26140 PF13439 Glycosyltransferase Family 4 CVS48_26140 PF13692 Glycosyl transferases group 1 CVS48_26145 PF01522 Polysaccharide deacetylase CVS48_26150 PF00534 Glycosyl transferases group 1 CVS48_26150 PF13439 Glycosyltransferase Family 4 CVS48_26155 PF00535 Glycosyl transferase family 2 CVS48_26160 PF01522 Polysaccharide deacetylase CVS48_26165 PF00534 Glycosyl transferases group 1 CVS48_26165 PF13439 Glycosyltransferase Family 4 CVS48_26170 PF01336 OB-fold nucleic acid binding domain CVS48_26170 PF02811 PHP domain CVS48_26170 PF07733 Bacterial DNA polymerase III alpha subunit CVS48_26170 PF14579 Helix-hairpin-helix motif CVS48_26175 PF05118 Aspartyl/Asparaginyl beta-hydroxylase CVS48_26180 PF00271 Helicase conserved C-terminal domain CVS48_26180 PF04408 Helicase associated domain (HA2) CVS48_26180 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CVS48_26180 PF11898 CVS48_26180 CVS48_26185 PF00583 Acetyltransferase (GNAT) family CVS48_26185 PF00696 Amino acid kinase family CVS48_26190 PF04362 Bacterial Fe(2+) trafficking CVS48_26195 PF04185 Phosphoesterase family CVS48_26195 PF05506 CVS48_26195 CVS48_26200 PF01895 PhoU domain CVS48_26205 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CVS48_26210 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CVS48_26210 PF02770 Acyl-CoA dehydrogenase, middle domain CVS48_26215 PF01425 Amidase CVS48_26225 PF10707 CVS48_26225 CVS48_26230 PF02245 Methylpurine-DNA glycosylase (MPG) CVS48_26235 PF03960 ArsC family CVS48_26240 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_26245 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_26250 PF00005 ABC transporter CVS48_26250 PF08402 TOBE domain CVS48_26255 PF13416 Bacterial extracellular solute-binding protein CVS48_26260 PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family CVS48_26265 PF01152 Bacterial-like globin CVS48_26270 PF02687 CVS48_26270 CVS48_26275 PF03480 Bacterial extracellular solute-binding protein, family 7 CVS48_26280 PF04290 CVS48_26280 CVS48_26285 PF06808 CVS48_26285 CVS48_26290 PF00005 ABC transporter CVS48_26290 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS48_26295 PF00005 ABC transporter CVS48_26295 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS48_26300 PF01979 Amidohydrolase family CVS48_26305 PF07969 Amidohydrolase family CVS48_26310 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_26310 PF12911 CVS48_26310 CVS48_26315 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_26320 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CVS48_26330 PF00392 Bacterial regulatory proteins, gntR family CVS48_26330 PF07729 FCD domain CVS48_26335 PF12112 Protein of unknown function (DUF3579) CVS48_26340 PF00202 Aminotransferase class-III CVS48_26345 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CVS48_26345 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CVS48_26350 PF12146 Putative lysophospholipase CVS48_26360 PF02627 Carboxymuconolactone decarboxylase family CVS48_26365 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_26370 PF04909 Amidohydrolase CVS48_26375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_26375 PF03466 LysR substrate binding domain CVS48_26380 PF00764 Arginosuccinate synthase CVS48_26385 PF02705 CVS48_26385 CVS48_26390 PF00512 His Kinase A (phospho-acceptor) domain CVS48_26390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_26395 PF00072 Response regulator receiver domain CVS48_26395 PF00486 Transcriptional regulatory protein, C terminal CVS48_26400 PF02472 Biopolymer transport protein ExbD/TolR CVS48_26405 PF01618 CVS48_26405 CVS48_26410 PF03544 Gram-negative bacterial TonB protein C-terminal CVS48_26420 PF00216 Bacterial DNA-binding protein CVS48_26425 PF13640 2OG-Fe(II) oxygenase superfamily CVS48_26430 PF01053 Cys/Met metabolism PLP-dependent enzyme CVS48_26435 PF00588 SpoU rRNA Methylase family CVS48_26435 PF08032 RNA 2'-O ribose methyltransferase substrate binding CVS48_26440 PF00575 S1 RNA binding domain CVS48_26440 PF00773 RNB domain CVS48_26440 PF08206 Ribonuclease B OB domain CVS48_26455 PF03942 CVS48_26455 CVS48_26465 PF13673 Acetyltransferase (GNAT) domain CVS48_26470 PF00892 EamA-like transporter family CVS48_26475 PF03547 CVS48_26475 CVS48_26480 PF02040 CVS48_26480 CVS48_26485 PF04143 CVS48_26485 CVS48_26490 PF01645 Conserved region in glutamate synthase CVS48_26495 PF13091 PLD-like domain CVS48_26500 PF05957 CVS48_26500 CVS48_26505 PF10017 CVS48_26505 CVS48_26510 PF03781 Sulfatase-modifying factor enzyme 1 CVS48_26510 PF12867 DinB superfamily CVS48_26540 PF00892 EamA-like transporter family CVS48_26550 PF00990 GGDEF domain CVS48_26555 PF13687 CVS48_26555 CVS48_26560 PF01594 CVS48_26560 CVS48_26565 PF11254 CVS48_26565 CVS48_26580 PF01292 Prokaryotic cytochrome b561 CVS48_26585 PF01322 Cytochrome C' CVS48_26590 PF00206 Lyase CVS48_26590 PF08328 Adenylosuccinate lyase C-terminal CVS48_26595 PF13410 Glutathione S-transferase, C-terminal domain CVS48_26595 PF13417 Glutathione S-transferase, N-terminal domain CVS48_26600 PF01925 CVS48_26600 CVS48_26605 PF03054 tRNA methyl transferase CVS48_26610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_26610 PF03466 LysR substrate binding domain CVS48_26615 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_26620 PF05013 N-formylglutamate amidohydrolase CVS48_26625 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CVS48_26625 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CVS48_26630 PF12769 Domain of unknown function (DUF3814) CVS48_26635 PF02233 NAD(P) transhydrogenase beta subunit CVS48_26640 PF02754 CVS48_26640 CVS48_26640 PF12838 4Fe-4S dicluster domain CVS48_26645 PF01565 FAD binding domain CVS48_26650 PF01565 FAD binding domain CVS48_26650 PF02913 FAD linked oxidases, C-terminal domain CVS48_26655 PF01565 FAD binding domain CVS48_26655 PF02913 FAD linked oxidases, C-terminal domain CVS48_26660 PF00793 DAHP synthetase I family CVS48_26665 PF01523 Putative modulator of DNA gyrase CVS48_26670 PF00816 H-NS histone family CVS48_26675 PF13590 Domain of unknown function (DUF4136) CVS48_26680 PF01433 Peptidase family M1 CVS48_26680 PF11940 Domain of unknown function (DUF3458) CVS48_26680 PF17432 CVS48_26680 CVS48_26685 PF00316 Fructose-1-6-bisphosphatase CVS48_26690 PF06004 Bacterial protein of unknown function (DUF903) CVS48_26695 PF00291 Pyridoxal-phosphate dependent enzyme CVS48_26695 PF14821 Threonine synthase N terminus CVS48_26700 PF00742 Homoserine dehydrogenase CVS48_26700 PF01842 ACT domain CVS48_26700 PF03447 Homoserine dehydrogenase, NAD binding domain CVS48_26705 PF00155 Aminotransferase class I and II CVS48_26710 PF04430 Protein of unknown function (DUF498/DUF598) CVS48_26715 PF00578 AhpC/TSA family CVS48_26720 PF02562 PhoH-like protein CVS48_26720 PF13638 PIN domain CVS48_26725 PF08085 CVS48_26725 CVS48_26730 PF01557 Fumarylacetoacetate (FAA) hydrolase family CVS48_26735 PF07876 Stress responsive A/B Barrel Domain CVS48_26740 PF02653 CVS48_26740 CVS48_26745 PF00005 ABC transporter CVS48_26750 PF00005 ABC transporter CVS48_26750 PF12399 Branched-chain amino acid ATP-binding cassette transporter CVS48_26755 PF13561 Enoyl-(Acyl carrier protein) reductase CVS48_26760 PF12973 ChrR Cupin-like domain CVS48_26765 PF13458 Periplasmic binding protein CVS48_26770 PF13561 Enoyl-(Acyl carrier protein) reductase CVS48_26775 PF01614 Bacterial transcriptional regulator CVS48_26775 PF09339 IclR helix-turn-helix domain CVS48_26780 PF00719 Inorganic pyrophosphatase CVS48_26785 PF07219 CVS48_26785 CVS48_26790 PF04375 CVS48_26790 CVS48_26795 PF02602 Uroporphyrinogen-III synthase HemD CVS48_26800 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CVS48_26800 PF03900 Porphobilinogen deaminase, C-terminal domain CVS48_26805 PF03741 CVS48_26805 CVS48_26810 PF03741 CVS48_26810 CVS48_26815 PF00549 CoA-ligase CVS48_26815 PF02629 CoA binding domain CVS48_26820 PF00549 CoA-ligase CVS48_26820 PF08442 ATP-grasp domain CVS48_26825 PF11136 CVS48_26825 CVS48_26830 PF01717 Cobalamin-independent synthase, Catalytic domain CVS48_26830 PF08267 Cobalamin-independent synthase, N-terminal domain CVS48_26835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_26835 PF03466 LysR substrate binding domain CVS48_26840 PF02631 RecX family CVS48_26845 PF00154 recA bacterial DNA recombination protein CVS48_26850 PF00072 Response regulator receiver domain CVS48_26850 PF00486 Transcriptional regulatory protein, C terminal CVS48_26855 PF00512 His Kinase A (phospho-acceptor) domain CVS48_26855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_26855 PF08521 CVS48_26855 CVS48_26860 PF00083 Sugar (and other) transporter CVS48_26870 PF04381 Putative exonuclease, RdgC CVS48_26875 PF00990 GGDEF domain CVS48_26875 PF11563 Protoglobin CVS48_26880 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CVS48_26880 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CVS48_26895 PF08085 CVS48_26895 CVS48_26910 PF03486 HI0933-like protein CVS48_26930 PF00155 Aminotransferase class I and II CVS48_26930 PF00392 Bacterial regulatory proteins, gntR family CVS48_26935 PF09335 CVS48_26935 CVS48_26955 PF01037 AsnC family CVS48_26955 PF13404 AsnC-type helix-turn-helix domain CVS48_26965 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CVS48_26970 PF13593 SBF-like CPA transporter family (DUF4137) CVS48_26975 PF00772 DnaB-like helicase N terminal domain CVS48_26975 PF03796 DnaB-like helicase C terminal domain CVS48_26985 PF01281 Ribosomal protein L9, N-terminal domain CVS48_26985 PF03948 Ribosomal protein L9, C-terminal domain CVS48_26990 PF01084 Ribosomal protein S18 CVS48_27000 PF01250 Ribosomal protein S6 CVS48_27005 PF05675 CVS48_27005 CVS48_27010 PF02649 Type I GTP cyclohydrolase folE2 CVS48_27015 PF02779 Transketolase, pyrimidine binding domain CVS48_27015 PF02780 Transketolase, C-terminal domain CVS48_27015 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CVS48_27020 PF00348 Polyprenyl synthetase CVS48_27025 PF02609 Exonuclease VII small subunit CVS48_27030 PF01614 Bacterial transcriptional regulator CVS48_27030 PF09339 IclR helix-turn-helix domain CVS48_27035 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_27040 PF01757 CVS48_27040 CVS48_27045 PF00355 Rieske [2Fe-2S] domain CVS48_27045 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CVS48_27050 PF01266 FAD dependent oxidoreductase CVS48_27055 PF13343 Bacterial extracellular solute-binding protein CVS48_27060 PF13419 Haloacid dehalogenase-like hydrolase CVS48_27065 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_27070 PF00005 ABC transporter CVS48_27075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_27075 PF03466 LysR substrate binding domain CVS48_27085 PF00581 Rhodanese-like domain CVS48_27090 PF00892 EamA-like transporter family CVS48_27095 PF01435 Peptidase family M48 CVS48_27100 PF03313 CVS48_27100 CVS48_27100 PF03315 Serine dehydratase beta chain CVS48_27105 PF02690 CVS48_27105 CVS48_27110 PF01738 Dienelactone hydrolase family CVS48_27115 PF02535 CVS48_27115 CVS48_27120 PF00476 DNA polymerase family A CVS48_27120 PF01367 5'-3' exonuclease, C-terminal SAM fold CVS48_27120 PF01612 3'-5' exonuclease CVS48_27120 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CVS48_27125 PF03641 Possible lysine decarboxylase CVS48_27135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_27135 PF03466 LysR substrate binding domain CVS48_27145 PF00009 Elongation factor Tu GTP binding domain CVS48_27145 PF00679 Elongation factor G C-terminus CVS48_27145 PF03144 Elongation factor Tu domain 2 CVS48_27150 PF01509 TruB family pseudouridylate synthase (N terminal domain) CVS48_27150 PF16198 CVS48_27150 CVS48_27155 PF02033 Ribosome-binding factor A CVS48_27160 PF00009 Elongation factor Tu GTP binding domain CVS48_27160 PF04760 Translation initiation factor IF-2, N-terminal region CVS48_27160 PF08364 CVS48_27160 CVS48_27160 PF11987 Translation-initiation factor 2 CVS48_27165 PF00575 S1 RNA binding domain CVS48_27165 PF08529 NusA N-terminal domain CVS48_27165 PF13184 NusA-like KH domain CVS48_27165 PF14520 Helix-hairpin-helix domain CVS48_27170 PF02576 Uncharacterised BCR, YhbC family COG0779 CVS48_27170 PF17384 CVS48_27170 CVS48_27175 PF00849 RNA pseudouridylate synthase CVS48_27175 PF01479 S4 domain CVS48_27180 PF04079 Putative transcriptional regulators (Ypuh-like) CVS48_27190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_27190 PF03466 LysR substrate binding domain CVS48_27195 PF02492 CobW/HypB/UreG, nucleotide-binding domain CVS48_27195 PF07683 Cobalamin synthesis protein cobW C-terminal domain CVS48_27210 PF00072 Response regulator receiver domain CVS48_27210 PF00486 Transcriptional regulatory protein, C terminal CVS48_27215 PF00512 His Kinase A (phospho-acceptor) domain CVS48_27215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_27215 PF08521 CVS48_27215 CVS48_27220 PF13180 PDZ domain CVS48_27220 PF13365 Trypsin-like peptidase domain CVS48_27225 PF13417 Glutathione S-transferase, N-terminal domain CVS48_27225 PF14497 Glutathione S-transferase, C-terminal domain CVS48_27230 PF02401 LytB protein CVS48_27235 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CVS48_27240 PF04002 RadC-like JAB domain CVS48_27245 PF04199 Putative cyclase CVS48_27250 PF03301 Tryptophan 2,3-dioxygenase CVS48_27255 PF01197 Ribosomal protein L31 CVS48_27265 PF01554 MatE CVS48_27270 PF00501 AMP-binding enzyme CVS48_27270 PF14535 AMP-binding enzyme C-terminal domain CVS48_27275 PF03061 Thioesterase superfamily CVS48_27280 PF00378 Enoyl-CoA hydratase/isomerase family CVS48_27285 PF00171 Aldehyde dehydrogenase family CVS48_27290 PF00111 2Fe-2S iron-sulfur cluster binding domain CVS48_27290 PF00175 Oxidoreductase NAD-binding domain CVS48_27290 PF00970 Oxidoreductase FAD-binding domain CVS48_27295 PF01883 Domain of unknown function DUF59 CVS48_27300 PF05138 Phenylacetic acid catabolic protein CVS48_27305 PF06243 Phenylacetic acid degradation B CVS48_27310 PF05138 Phenylacetic acid catabolic protein CVS48_27315 PF07848 PaaX-like protein CVS48_27315 PF08223 PaaX-like protein C-terminal domain CVS48_27320 PF03853 YjeF-related protein N-terminus CVS48_27325 PF00929 Exonuclease CVS48_27330 PF01435 Peptidase family M48 CVS48_27330 PF16491 CVS48_27330 CVS48_27335 PF03193 Protein of unknown function, DUF258 CVS48_27345 PF00293 NUDIX domain CVS48_27350 PF01245 Ribosomal protein L19 CVS48_27355 PF00892 EamA-like transporter family CVS48_27365 PF04055 Radical SAM superfamily CVS48_27370 PF00009 Elongation factor Tu GTP binding domain CVS48_27375 PF01507 Phosphoadenosine phosphosulfate reductase family CVS48_27380 PF01507 Phosphoadenosine phosphosulfate reductase family CVS48_27385 PF00005 ABC transporter CVS48_27385 PF12857 CVS48_27385 CVS48_27390 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_27395 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_27400 PF13531 Bacterial extracellular solute-binding protein CVS48_27405 PF00578 AhpC/TSA family CVS48_27405 PF10417 C-terminal domain of 1-Cys peroxiredoxin CVS48_27410 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CVS48_27410 PF02770 Acyl-CoA dehydrogenase, middle domain CVS48_27410 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CVS48_27410 PF12418 CVS48_27410 CVS48_27410 PF12806 CVS48_27410 CVS48_27415 PF06826 CVS48_27415 CVS48_27420 PF00155 Aminotransferase class I and II CVS48_27425 PF02080 TrkA-C domain CVS48_27425 PF06826 CVS48_27425 CVS48_27430 PF00766 Electron transfer flavoprotein FAD-binding domain CVS48_27430 PF01012 Electron transfer flavoprotein domain CVS48_27435 PF01012 Electron transfer flavoprotein domain CVS48_27440 PF00850 Histone deacetylase domain CVS48_27445 PF13406 Transglycosylase SLT domain CVS48_27450 PF00291 Pyridoxal-phosphate dependent enzyme CVS48_27455 PF12836 Helix-hairpin-helix motif CVS48_27470 PF01370 NAD dependent epimerase/dehydratase family CVS48_27475 PF00294 pfkB family carbohydrate kinase CVS48_27485 PF06305 CVS48_27485 CVS48_27490 PF00216 Bacterial DNA-binding protein CVS48_27495 PF00575 S1 RNA binding domain CVS48_27500 PF02224 Cytidylate kinase CVS48_27505 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CVS48_27510 PF02153 Prephenate dehydrogenase CVS48_27515 PF00155 Aminotransferase class I and II CVS48_27520 PF00800 Prephenate dehydratase CVS48_27520 PF01817 Chorismate mutase type II CVS48_27520 PF01842 ACT domain CVS48_27525 PF00266 Aminotransferase class-V CVS48_27530 PF00521 DNA gyrase/topoisomerase IV, subunit A CVS48_27530 PF03989 DNA gyrase C-terminal domain, beta-propeller CVS48_27535 PF00691 OmpA family CVS48_27540 PF13489 Methyltransferase domain CVS48_27545 PF13419 Haloacid dehalogenase-like hydrolase CVS48_27550 PF07690 Major Facilitator Superfamily CVS48_27560 PF02350 UDP-N-acetylglucosamine 2-epimerase CVS48_27565 PF03170 Bacterial cellulose synthase subunit CVS48_27570 PF13632 Glycosyl transferase family group 2 CVS48_27575 PF13283 CVS48_27575 CVS48_27575 PF13432 Tetratricopeptide repeat CVS48_27580 PF14488 Domain of unknown function (DUF4434) CVS48_27585 PF06078 Bacterial protein of unknown function (DUF937) CVS48_27590 PF01471 Putative peptidoglycan binding domain CVS48_27590 PF13406 Transglycosylase SLT domain CVS48_27595 PF03473 MOSC domain CVS48_27595 PF03475 3-alpha domain CVS48_27600 PF04305 CVS48_27600 CVS48_27605 PF04339 CVS48_27605 CVS48_27610 PF08909 CVS48_27610 CVS48_27615 PF00005 ABC transporter CVS48_27615 PF00664 ABC transporter transmembrane region CVS48_27620 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CVS48_27620 PF08245 Mur ligase middle domain CVS48_27625 PF02222 ATP-grasp domain CVS48_27625 PF02875 Mur ligase family, glutamate ligase domain CVS48_27625 PF08245 Mur ligase middle domain CVS48_27630 PF05532 CsbD-like CVS48_27635 PF07043 CVS48_27635 CVS48_27640 PF04972 BON domain CVS48_27645 PF02567 Phenazine biosynthesis-like protein CVS48_27650 PF12801 CVS48_27650 CVS48_27655 PF03239 CVS48_27655 CVS48_27660 PF13473 Cupredoxin-like domain CVS48_27665 PF10634 Fe2+ transport protein CVS48_27670 PF05233 CVS48_27670 CVS48_27670 PF07879 CVS48_27670 CVS48_27675 PF00106 short chain dehydrogenase CVS48_27680 PF07167 CVS48_27680 CVS48_27685 PF02578 Multi-copper polyphenol oxidoreductase laccase CVS48_27690 PF00849 RNA pseudouridylate synthase CVS48_27690 PF01479 S4 domain CVS48_27695 PF13525 Outer membrane lipoprotein CVS48_27700 PF06733 DEAD_2 CVS48_27700 PF13307 Helicase C-terminal domain CVS48_27705 PF00575 S1 RNA binding domain CVS48_27705 PF09371 Tex-like protein N-terminal domain CVS48_27705 PF12836 Helix-hairpin-helix motif CVS48_27705 PF16921 CVS48_27705 CVS48_27715 PF00579 tRNA synthetases class I (W and Y) CVS48_27720 PF11804 CVS48_27720 CVS48_27725 PF03929 CVS48_27725 CVS48_27730 PF12365 CVS48_27730 CVS48_27735 PF10670 CVS48_27735 CVS48_27740 PF00701 Dihydrodipicolinate synthetase family CVS48_27745 PF05544 Proline racemase CVS48_27750 PF01266 FAD dependent oxidoreductase CVS48_27755 PF07992 Pyridine nucleotide-disulphide oxidoreductase CVS48_27755 PF13510 2Fe-2S iron-sulfur cluster binding domain CVS48_27760 PF00459 Inositol monophosphatase family CVS48_27765 PF00005 ABC transporter CVS48_27765 PF08402 TOBE domain CVS48_27770 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_27775 PF13343 Bacterial extracellular solute-binding protein CVS48_27780 PF00593 TonB dependent receptor CVS48_27780 PF07660 Secretin and TonB N terminus short domain CVS48_27780 PF07715 TonB-dependent Receptor Plug Domain CVS48_27785 PF04773 FecR protein CVS48_27785 PF16220 CVS48_27785 CVS48_27790 PF04542 Sigma-70 region 2 CVS48_27790 PF08281 Sigma-70, region 4 CVS48_27795 PF03969 AFG1-like ATPase CVS48_27800 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CVS48_27800 PF07992 Pyridine nucleotide-disulphide oxidoreductase CVS48_27805 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CVS48_27805 PF00364 Biotin-requiring enzyme CVS48_27805 PF02817 e3 binding domain CVS48_27810 PF00676 Dehydrogenase E1 component CVS48_27810 PF02779 Transketolase, pyrimidine binding domain CVS48_27810 PF16078 CVS48_27810 CVS48_27810 PF16870 CVS48_27810 CVS48_27815 PF01037 AsnC family CVS48_27815 PF13412 Winged helix-turn-helix DNA-binding CVS48_27820 PF00291 Pyridoxal-phosphate dependent enzyme CVS48_27825 PF06181 CVS48_27825 CVS48_27830 PF00576 HIUase/Transthyretin family CVS48_27835 PF01522 Polysaccharide deacetylase CVS48_27840 PF01546 Peptidase family M20/M25/M40 CVS48_27840 PF09349 OHCU decarboxylase CVS48_27845 PF01546 Peptidase family M20/M25/M40 CVS48_27845 PF07687 Peptidase dimerisation domain CVS48_27850 PF00860 Permease family CVS48_27855 PF03169 CVS48_27855 CVS48_27860 PF00456 Transketolase, thiamine diphosphate binding domain CVS48_27865 PF00390 Malic enzyme, N-terminal domain CVS48_27865 PF01515 Phosphate acetyl/butaryl transferase CVS48_27865 PF03949 Malic enzyme, NAD binding domain CVS48_27870 PF09980 CVS48_27870 CVS48_27875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_27875 PF03466 LysR substrate binding domain CVS48_27885 PF00285 Citrate synthase CVS48_27890 PF03937 Flavinator of succinate dehydrogenase CVS48_27895 PF13085 2Fe-2S iron-sulfur cluster binding domain CVS48_27895 PF13534 4Fe-4S dicluster domain CVS48_27900 PF00890 FAD binding domain CVS48_27900 PF02910 Fumarate reductase flavoprotein C-term CVS48_27905 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CVS48_27910 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CVS48_27915 PF00392 Bacterial regulatory proteins, gntR family CVS48_27915 PF07702 UTRA domain CVS48_27920 PF00056 lactate/malate dehydrogenase, NAD binding domain CVS48_27920 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CVS48_27925 PF13714 Phosphoenolpyruvate phosphomutase CVS48_27930 PF00285 Citrate synthase CVS48_27935 PF03972 MmgE/PrpD family CVS48_27940 PF03653 CVS48_27940 CVS48_27945 PF01170 Putative RNA methylase family UPF0020 CVS48_27945 PF02926 THUMP domain CVS48_27955 PF06271 CVS48_27955 CVS48_27960 PF00149 Calcineurin-like phosphoesterase CVS48_27970 PF00132 Bacterial transferase hexapeptide (six repeats) CVS48_27975 PF01430 Hsp33 protein CVS48_27985 PF04977 Septum formation initiator CVS48_27990 PF00113 Enolase, C-terminal TIM barrel domain CVS48_27990 PF03952 Enolase, N-terminal domain CVS48_27995 PF07045 Protein of unknown function (DUF1330) CVS48_28005 PF00117 Glutamine amidotransferase class-I CVS48_28005 PF06418 CTP synthase N-terminus CVS48_28015 PF00665 Integrase core domain CVS48_28015 PF13518 Helix-turn-helix domain CVS48_28020 PF00557 Metallopeptidase family M24 CVS48_28020 PF01321 Creatinase/Prolidase N-terminal domain CVS48_28020 PF16188 CVS48_28020 CVS48_28020 PF16189 CVS48_28020 CVS48_28025 PF04951 D-aminopeptidase CVS48_28030 PF03576 Peptidase family S58 CVS48_28035 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_28035 PF12911 CVS48_28035 CVS48_28040 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_28045 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CVS48_28050 PF00005 ABC transporter CVS48_28050 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS48_28055 PF01112 Asparaginase CVS48_28060 PF01380 SIS domain CVS48_28060 PF01418 Helix-turn-helix domain, rpiR family CVS48_28065 PF13673 Acetyltransferase (GNAT) domain CVS48_28070 PF01144 Coenzyme A transferase CVS48_28075 PF01144 Coenzyme A transferase CVS48_28080 PF13279 Thioesterase-like superfamily CVS48_28085 PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase CVS48_28085 PF13450 NAD(P)-binding Rossmann-like domain CVS48_28090 PF13460 NADH(P)-binding CVS48_28100 PF03992 Antibiotic biosynthesis monooxygenase CVS48_28105 PF00005 ABC transporter CVS48_28105 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS48_28110 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_28115 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_28120 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CVS48_28125 PF03417 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase CVS48_28130 PF00392 Bacterial regulatory proteins, gntR family CVS48_28130 PF07729 FCD domain CVS48_28135 PF00202 Aminotransferase class-III CVS48_28140 PF01212 Beta-eliminating lyase CVS48_28145 PF00892 EamA-like transporter family CVS48_28150 PF00501 AMP-binding enzyme CVS48_28150 PF13193 AMP-binding enzyme C-terminal domain CVS48_28150 PF16177 CVS48_28150 CVS48_28155 PF11700 CVS48_28155 CVS48_28160 PF03928 Domain of unknown function (DUF336) CVS48_28165 PF00501 AMP-binding enzyme CVS48_28165 PF13193 AMP-binding enzyme C-terminal domain CVS48_28165 PF16177 CVS48_28165 CVS48_28170 PF00877 NlpC/P60 family CVS48_28175 PF10087 CVS48_28175 CVS48_28180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_28180 PF03466 LysR substrate binding domain CVS48_28185 PF00171 Aldehyde dehydrogenase family CVS48_28190 PF13458 Periplasmic binding protein CVS48_28195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_28195 PF03466 LysR substrate binding domain CVS48_28200 PF03739 CVS48_28200 CVS48_28205 PF00883 Cytosol aminopeptidase family, catalytic domain CVS48_28205 PF02789 Cytosol aminopeptidase family, N-terminal domain CVS48_28210 PF04364 DNA polymerase III chi subunit, HolC CVS48_28220 PF01027 Inhibitor of apoptosis-promoting Bax1 CVS48_28225 PF00248 Aldo/keto reductase family CVS48_28230 PF07690 Major Facilitator Superfamily CVS48_28235 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_28240 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family CVS48_28245 PF00291 Pyridoxal-phosphate dependent enzyme CVS48_28250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_28250 PF03466 LysR substrate binding domain CVS48_28255 PF02565 Recombination protein O C terminal CVS48_28255 PF11967 Recombination protein O N terminal CVS48_28260 PF01926 50S ribosome-binding GTPase CVS48_28260 PF07650 KH domain CVS48_28265 PF00035 Double-stranded RNA binding motif CVS48_28265 PF14622 Ribonuclease-III-like CVS48_28270 PF00717 Peptidase S24-like CVS48_28270 PF10502 Signal peptidase, peptidase S26 CVS48_28275 PF00009 Elongation factor Tu GTP binding domain CVS48_28275 PF00679 Elongation factor G C-terminus CVS48_28275 PF03144 Elongation factor Tu domain 2 CVS48_28275 PF06421 GTP-binding protein LepA C-terminus CVS48_28280 PF13180 PDZ domain CVS48_28280 PF13365 Trypsin-like peptidase domain CVS48_28285 PF03888 MucB/RseB family CVS48_28285 PF17188 CVS48_28285 CVS48_28290 PF03872 Anti sigma-E protein RseA, N-terminal domain CVS48_28295 PF04542 Sigma-70 region 2 CVS48_28295 PF08281 Sigma-70, region 4 CVS48_28305 PF00109 Beta-ketoacyl synthase, N-terminal domain CVS48_28305 PF02801 Beta-ketoacyl synthase, C-terminal domain CVS48_28310 PF00550 Phosphopantetheine attachment site CVS48_28315 PF13561 Enoyl-(Acyl carrier protein) reductase CVS48_28320 PF00698 Acyl transferase domain CVS48_28325 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CVS48_28325 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CVS48_28330 PF02504 Fatty acid synthesis protein CVS48_28335 PF01783 Ribosomal L32p protein family CVS48_28340 PF02620 CVS48_28340 CVS48_28345 PF02545 Maf-like protein CVS48_28350 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CVS48_28355 PF01471 Putative peptidoglycan binding domain CVS48_28355 PF01510 N-acetylmuramoyl-L-alanine amidase CVS48_28360 PF01794 CVS48_28360 CVS48_28365 PF00174 Oxidoreductase molybdopterin binding domain CVS48_28370 PF13419 Haloacid dehalogenase-like hydrolase CVS48_28375 PF00849 RNA pseudouridylate synthase CVS48_28375 PF01479 S4 domain CVS48_28380 PF00575 S1 RNA binding domain CVS48_28380 PF10150 Ribonuclease E/G family CVS48_28385 PF09411 Lipid A 3-O-deacylase (PagL) CVS48_28390 PF01039 Carboxyl transferase domain CVS48_28395 PF00290 Tryptophan synthase alpha chain CVS48_28400 PF00291 Pyridoxal-phosphate dependent enzyme CVS48_28405 PF01546 Peptidase family M20/M25/M40 CVS48_28405 PF07687 Peptidase dimerisation domain CVS48_28410 PF00083 Sugar (and other) transporter CVS48_28415 PF02824 TGS domain CVS48_28415 PF04607 Region found in RelA / SpoT proteins CVS48_28415 PF13291 ACT domain CVS48_28415 PF13328 HD domain CVS48_28420 PF06167 Glucose-regulated metallo-peptidase M90 CVS48_28430 PF01042 Endoribonuclease L-PSP CVS48_28435 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CVS48_28440 PF00037 4Fe-4S binding domain CVS48_28440 PF11953 Domain of unknown function (DUF3470) CVS48_28445 PF00175 Oxidoreductase NAD-binding domain CVS48_28445 PF00970 Oxidoreductase FAD-binding domain CVS48_28450 PF06850 CVS48_28450 CVS48_28455 PF04060 Putative Fe-S cluster CVS48_28455 PF14697 4Fe-4S dicluster domain CVS48_28460 PF00633 Helix-hairpin-helix motif CVS48_28460 PF00730 HhH-GPD superfamily base excision DNA repair protein CVS48_28465 PF00005 ABC transporter CVS48_28465 PF12399 Branched-chain amino acid ATP-binding cassette transporter CVS48_28470 PF00005 ABC transporter CVS48_28475 PF13458 Periplasmic binding protein CVS48_28480 PF02653 CVS48_28480 CVS48_28485 PF02653 CVS48_28485 CVS48_28490 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CVS48_28495 PF01063 Aminotransferase class IV CVS48_28500 PF00005 ABC transporter CVS48_28505 PF00005 ABC transporter CVS48_28505 PF02653 CVS48_28505 CVS48_28505 PF12399 Branched-chain amino acid ATP-binding cassette transporter CVS48_28510 PF02653 CVS48_28510 CVS48_28515 PF13458 Periplasmic binding protein CVS48_28520 PF02632 BioY family CVS48_28525 PF02361 Cobalt transport protein CVS48_28530 PF00005 ABC transporter CVS48_28535 PF01641 SelR domain CVS48_28540 PF04279 CVS48_28540 CVS48_28545 PF01722 BolA-like protein CVS48_28550 PF13616 PPIC-type PPIASE domain CVS48_28555 PF00533 BRCA1 C Terminus (BRCT) domain CVS48_28555 PF01653 NAD-dependent DNA ligase adenylation domain CVS48_28555 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CVS48_28555 PF03120 NAD-dependent DNA ligase OB-fold domain CVS48_28555 PF12826 Helix-hairpin-helix motif CVS48_28555 PF14520 Helix-hairpin-helix domain CVS48_28560 PF04354 ZipA, C-terminal FtsZ-binding domain CVS48_28565 PF02463 RecF/RecN/SMC N terminal domain CVS48_28565 PF06470 SMC proteins Flexible Hinge Domain CVS48_28570 PF07690 Major Facilitator Superfamily CVS48_28575 PF03167 Uracil DNA glycosylase superfamily CVS48_28580 PF00583 Acetyltransferase (GNAT) family CVS48_28580 PF00814 Glycoprotease family CVS48_28585 PF00072 Response regulator receiver domain CVS48_28585 PF00486 Transcriptional regulatory protein, C terminal CVS48_28590 PF00512 His Kinase A (phospho-acceptor) domain CVS48_28590 PF00672 HAMP domain CVS48_28590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_28590 PF16524 CVS48_28590 CVS48_28595 PF00578 AhpC/TSA family CVS48_28600 PF02627 Carboxymuconolactone decarboxylase family CVS48_28605 PF14247 CVS48_28605 CVS48_28610 PF02542 YgbB family CVS48_28615 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CVS48_28620 PF00270 DEAD/DEAH box helicase CVS48_28620 PF00271 Helicase conserved C-terminal domain CVS48_28620 PF02559 CarD-like/TRCF domain CVS48_28620 PF03461 TRCF domain CVS48_28625 PF12710 haloacid dehalogenase-like hydrolase CVS48_28625 PF13284 CVS48_28625 CVS48_28630 PF00593 TonB dependent receptor CVS48_28630 PF07715 TonB-dependent Receptor Plug Domain CVS48_28635 PF10993 CVS48_28635 CVS48_28640 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains CVS48_28645 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains CVS48_28645 PF01059 CVS48_28645 CVS48_28650 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains CVS48_28650 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CVS48_28655 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CVS48_28660 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CVS48_28665 PF12838 4Fe-4S dicluster domain CVS48_28670 PF00146 NADH dehydrogenase CVS48_28675 PF00384 Molybdopterin oxidoreductase CVS48_28675 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CVS48_28675 PF13510 2Fe-2S iron-sulfur cluster binding domain CVS48_28680 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CVS48_28680 PF10531 SLBB domain CVS48_28680 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CVS48_28685 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin CVS48_28690 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CVS48_28695 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CVS48_28700 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CVS48_28705 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CVS48_28710 PF13609 Gram-negative porin CVS48_28715 PF00440 Bacterial regulatory proteins, tetR family CVS48_28720 PF03061 Thioesterase superfamily CVS48_28725 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CVS48_28730 PF01569 PAP2 superfamily CVS48_28735 PF00149 Calcineurin-like phosphoesterase CVS48_28740 PF00781 Diacylglycerol kinase catalytic domain CVS48_28745 PF01019 Gamma-glutamyltranspeptidase CVS48_28750 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CVS48_28755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_28755 PF03466 LysR substrate binding domain CVS48_28765 PF02321 Outer membrane efflux protein CVS48_28770 PF00873 AcrB/AcrD/AcrF family CVS48_28775 PF16576 CVS48_28775 CVS48_28780 PF02028 BCCT family transporter CVS48_28785 PF00440 Bacterial regulatory proteins, tetR family CVS48_28785 PF13977 Bacterial transcriptional repressor CVS48_28790 PF16576 CVS48_28790 CVS48_28795 PF00873 AcrB/AcrD/AcrF family CVS48_28800 PF02321 Outer membrane efflux protein CVS48_28805 PF03417 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase CVS48_28810 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CVS48_28815 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CVS48_28820 PF00392 Bacterial regulatory proteins, gntR family CVS48_28820 PF07729 FCD domain CVS48_28825 PF00005 ABC transporter CVS48_28825 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CVS48_28830 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_28835 PF00528 Binding-protein-dependent transport system inner membrane component CVS48_28845 PF05661 CVS48_28845 CVS48_28855 PF00313 'Cold-shock' DNA-binding domain CVS48_28870 PF07927 YcfA-like protein CVS48_28875 PF15919 CVS48_28875 CVS48_28880 PF13561 Enoyl-(Acyl carrier protein) reductase CVS48_28885 PF03600 Citrate transporter CVS48_28890 PF00072 Response regulator receiver domain CVS48_28890 PF00486 Transcriptional regulatory protein, C terminal CVS48_28895 PF00512 His Kinase A (phospho-acceptor) domain CVS48_28895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CVS48_28895 PF08521 CVS48_28895 CVS48_28900 PF13531 Bacterial extracellular solute-binding protein CVS48_28905 PF00196 Bacterial regulatory proteins, luxR family CVS48_28915 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_28920 PF00884 Sulfatase CVS48_28920 PF16347 CVS48_28920 CVS48_28925 PF01804 Penicillin amidase CVS48_28930 PF03724 META domain CVS48_28930 PF14302 CVS48_28930 CVS48_28935 PF05488 PAAR motif CVS48_28945 PF11784 CVS48_28945 CVS48_28945 PF13086 AAA domain CVS48_28945 PF13087 AAA domain CVS48_28945 PF13195 CVS48_28945 CVS48_28950 PF07007 Protein of unknown function (DUF1311) CVS48_28960 PF00990 GGDEF domain CVS48_28960 PF13185 GAF domain CVS48_28965 PF00881 Nitroreductase family CVS48_28970 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_28975 PF11578 Protein of unknown function (DUF3237) CVS48_28980 PF01494 FAD binding domain CVS48_28985 PF12802 MarR family CVS48_28990 PF13350 Tyrosine phosphatase family CVS48_29010 PF00593 TonB dependent receptor CVS48_29010 PF07715 TonB-dependent Receptor Plug Domain CVS48_29015 PF04773 FecR protein CVS48_29015 PF16220 CVS48_29015 CVS48_29020 PF04542 Sigma-70 region 2 CVS48_29020 PF08281 Sigma-70, region 4 CVS48_29025 PF03840 Preprotein translocase SecG subunit CVS48_29030 PF00121 Triosephosphate isomerase CVS48_29035 PF00107 Zinc-binding dehydrogenase CVS48_29035 PF08240 Alcohol dehydrogenase GroES-like domain CVS48_29045 PF00682 HMGL-like CVS48_29050 PF03401 Tripartite tricarboxylate transporter family receptor CVS48_29055 PF02515 CoA-transferase family III CVS48_29060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CVS48_29060 PF03466 LysR substrate binding domain CVS48_29065 PF06271 CVS48_29065 CVS48_29070 PF13432 Tetratricopeptide repeat CVS48_29075 PF13470 CVS48_29075 CVS48_29080 PF01970 CVS48_29080 CVS48_29085 PF07331 CVS48_29085 CVS48_29090 PF00291 Pyridoxal-phosphate dependent enzyme CVS48_29090 PF01842 ACT domain CVS48_29100 PF00013 KH domain CVS48_29100 PF00575 S1 RNA binding domain CVS48_29100 PF01138 3' exoribonuclease family, domain 1 CVS48_29100 PF03725 3' exoribonuclease family, domain 2 CVS48_29100 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CVS48_29105 PF00312 Ribosomal protein S15 CVS48_29115 PF01066 CDP-alcohol phosphatidyltransferase CVS48_29120 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CVS48_29120 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain CVS48_29125 PF10369 Small subunit of acetolactate synthase CVS48_29125 PF13710 ACT domain