locus-tag	class	description
CLM73_00010	COG0592	DNA-directed DNA polymerase activity
CLM73_00020	COG1028	Short-chain dehydrogenase reductase Sdr
CLM73_00055	COG0583	DNA-binding transcription factor activity
CLM73_00060	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CLM73_00065	COG0765	amino acid transport
CLM73_00070	COG0765	amino acid transport
CLM73_00075	COG1126	abc transporter atp-binding protein
CLM73_00090	COG1254	Belongs to the acylphosphatase family
CLM73_00100	COG1304	FMN binding
CLM73_00110	COG3842	ATPase activity
CLM73_00115	COG1176	ABC-type spermidine putrescine transport system, permease component I
CLM73_00120	COG1177	transmembrane transport
CLM73_00150	COG1609	Transcriptional regulator
CLM73_00160	COG3842	ATPase activity
CLM73_00165	COG1176	ABC-type spermidine putrescine transport system, permease component I
CLM73_00170	COG1177	transmembrane transport
CLM73_00195	COG0251	oxidation-reduction process
CLM73_00200	COG0402	S-adenosylhomocysteine deaminase activity
CLM73_00220	COG1744	ABC transporter substrate-binding protein PnrA-like
CLM73_00230	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
CLM73_00245	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CLM73_00260	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
CLM73_00270	COG3781	membrane
CLM73_00275	COG1522	sequence-specific DNA binding
CLM73_00280	COG0028	Belongs to the TPP enzyme family
CLM73_00285	COG1028	Short-chain dehydrogenase reductase Sdr
CLM73_00290	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CLM73_00295	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
CLM73_00305	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CLM73_00305	COG0551	DNA topoisomerase type I activity
CLM73_00315	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
CLM73_00320	COG2922	Belongs to the Smg family
CLM73_00355	COG0765	amino acid transport
CLM73_00360	COG0765	amino acid transport
CLM73_00365	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CLM73_00370	COG0583	DNA-binding transcription factor activity
CLM73_00385	COG3181	Tripartite tricarboxylate transporter family receptor
CLM73_00390	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
CLM73_00445	COG1595	DNA-templated transcription, initiation
CLM73_00450	COG0753	catalase activity
CLM73_00460	COG2186	Transcriptional regulator
CLM73_00465	COG3181	Tripartite tricarboxylate transporter family receptor
CLM73_00515	COG0477	Major facilitator Superfamily
CLM73_00525	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
CLM73_00530	COG0183	Belongs to the thiolase family
CLM73_00535	COG4579	[isocitrate dehydrogenase (NADP+)] phosphatase activity
CLM73_00540	COG1960	acyl-CoA dehydrogenase activity
CLM73_00545	COG1473	amidohydrolase
CLM73_00550	COG3181	Tripartite tricarboxylate transporter family receptor
CLM73_00555	COG1742	UPF0060 membrane protein
CLM73_00565	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CLM73_00595	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
CLM73_00605	COG0018	arginyl-trna synthetase
CLM73_00620	COG0395	ABC-type sugar transport system, permease component
CLM73_00625	COG1175	transmembrane transport
CLM73_00630	COG1653	transport
CLM73_00640	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
CLM73_00645	COG1609	Transcriptional regulator
CLM73_00650	COG0154	amidase activity
CLM73_00655	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CLM73_00665	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
CLM73_00695	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
CLM73_00700	COG1280	lysine exporter protein (LysE YggA)
CLM73_00705	COG0513	Belongs to the DEAD box helicase family
CLM73_00710	COG5339	Protein conserved in bacteria
CLM73_00730	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CLM73_00735	COG0601	transmembrane transport
CLM73_00740	COG4166	transmembrane transport
CLM73_00745	COG1160	GTP binding
CLM73_00755	COG3708	Transcriptional regulator
CLM73_00755	COG2207	Transcriptional regulator
CLM73_00760	COG0697	spore germination
CLM73_00765	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
CLM73_00775	COG0583	DNA-binding transcription factor activity
CLM73_00805	COG2969	positive regulation of protein catabolic process
CLM73_00810	COG0625	glutathione transferase activity
CLM73_00815	COG2857	Cytochrome c1
CLM73_00820	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
CLM73_00825	COG0723	plastoquinol--plastocyanin reductase activity
CLM73_00830	COG1970	mechanosensitive ion channel activity
CLM73_00835	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
CLM73_00840	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CLM73_00855	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
CLM73_00860	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
CLM73_00865	COG0537	adenosine 5'-monophosphoramidase activity
CLM73_00870	COG0140	phosphoribosyl-ATP diphosphatase activity
CLM73_00875	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
CLM73_00880	COG0107	imidazoleglycerol-phosphate synthase activity
CLM73_00885	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
CLM73_00890	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
CLM73_00895	COG0131	Imidazoleglycerol-phosphate dehydratase
CLM73_00900	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
CLM73_00905	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
CLM73_00910	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
CLM73_00915	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
CLM73_00925	COG0842	Transport permease protein
CLM73_00930	COG1131	(ABC) transporter
CLM73_00940	COG2853	Lipoprotein
CLM73_00945	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
CLM73_00950	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
CLM73_00955	COG1127	ABC transporter
CLM73_00960	COG2070	2-Nitropropane dioxygenase
CLM73_00975	COG0583	DNA-binding transcription factor activity
CLM73_00980	COG3047	cAMP biosynthetic process
CLM73_00990	COG0067	glutamate synthase
CLM73_00990	COG0069	glutamate synthase activity
CLM73_00990	COG0070	glutamate synthase
CLM73_01015	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
CLM73_01035	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
CLM73_01070	COG0109	protoheme IX farnesyltransferase activity
CLM73_01075	COG1999	signal sequence binding
CLM73_01095	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
CLM73_01100	COG2814	Major facilitator Superfamily
CLM73_01115	COG1522	sequence-specific DNA binding
CLM73_01120	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
CLM73_01150	COG1024	Enoyl-CoA hydratase
CLM73_01155	COG0318	PFAM AMP-dependent synthetase and ligase
CLM73_01160	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CLM73_01170	COG1024	Enoyl-CoA hydratase
CLM73_01175	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CLM73_01185	COG2070	2-Nitropropane dioxygenase
CLM73_01210	COG2814	Major facilitator Superfamily
CLM73_01215	COG1401	restriction endodeoxyribonuclease activity
CLM73_01230	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CLM73_01240	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
CLM73_01255	COG0154	amidase activity
CLM73_01265	COG0583	DNA-binding transcription factor activity
CLM73_01270	COG3181	Tripartite tricarboxylate transporter family receptor
CLM73_01275	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
CLM73_01290	COG0583	DNA-binding transcription factor activity
CLM73_01320	COG4566	intracellular signal transduction
CLM73_01330	COG2814	Major facilitator Superfamily
CLM73_01350	COG1574	metal-dependent hydrolase with the TIM-barrel fold
CLM73_01355	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CLM73_01365	COG0745	RESPONSE REGULATOR receiver
CLM73_01370	COG0642	Histidine kinase
CLM73_01465	COG4964	Belongs to the GSP D family
CLM73_01485	COG5002	protein histidine kinase activity
CLM73_01495	COG0741	lytic transglycosylase activity
CLM73_01520	COG0583	DNA-binding transcription factor activity
CLM73_01525	COG0861	Integral membrane protein TerC family
CLM73_01565	COG0243	molybdopterin cofactor binding
CLM73_01575	COG0154	amidase activity
CLM73_01585	COG0583	DNA-binding transcription factor activity
CLM73_01590	COG1902	pentaerythritol trinitrate reductase activity
CLM73_01595	COG0656	L-ascorbic acid biosynthetic process
CLM73_01600	COG0583	DNA-binding transcription factor activity
CLM73_01610	COG2197	response regulator
CLM73_01630	COG2814	Major facilitator Superfamily
CLM73_01635	COG0583	DNA-binding transcription factor activity
CLM73_01640	COG0604	alcohol dehydrogenase
CLM73_01645	COG2423	ornithine cyclodeaminase activity
CLM73_01655	COG2200	EAL domain
CLM73_01665	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
CLM73_01680	COG5001	Diguanylate cyclase
CLM73_01715	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CLM73_01725	COG2814	Major facilitator Superfamily
CLM73_01740	COG3188	usher protein
CLM73_01790	COG1802	Transcriptional regulator
CLM73_01800	COG3069	C4-dicarboxylate transmembrane transporter activity
CLM73_01805	COG1012	belongs to the aldehyde dehydrogenase family
CLM73_01825	COG3064	Membrane
CLM73_01870	COG3501	Rhs element vgr protein
CLM73_01875	COG1607	acyl-coa hydrolase
CLM73_01885	COG3383	formate dehydrogenase (NAD+) activity
CLM73_01885	COG0243	molybdopterin cofactor binding
CLM73_01890	COG0243	molybdopterin cofactor binding
CLM73_01890	COG3383	formate dehydrogenase (NAD+) activity
CLM73_01895	COG0437	4 iron, 4 sulfur cluster binding
CLM73_01900	COG2864	formate dehydrogenase
CLM73_01915	COG3276	selenocysteine insertion sequence binding
CLM73_01930	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
CLM73_01935	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CLM73_01945	COG3712	iron ion homeostasis
CLM73_01955	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CLM73_01965	COG0583	DNA-binding transcription factor activity
CLM73_01985	COG1012	belongs to the aldehyde dehydrogenase family
CLM73_01990	COG3284	Transcriptional regulator
CLM73_01995	COG0134	indole-3-glycerol-phosphate synthase activity
CLM73_02000	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
CLM73_02005	COG0512	Glutamine amidotransferase of anthranilate synthase
CLM73_02015	COG0546	phosphoglycolate phosphatase activity
CLM73_02025	COG2967	ApaG domain
CLM73_02030	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
CLM73_02035	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CLM73_02040	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
CLM73_02045	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CLM73_02050	COG0037	tRNA processing
CLM73_02075	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
CLM73_02095	COG1024	Enoyl-CoA hydratase
CLM73_02110	COG0356	it plays a direct role in the translocation of protons across the membrane
CLM73_02120	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
CLM73_02125	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
CLM73_02130	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
CLM73_02135	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
CLM73_02140	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
CLM73_02145	COG0355	proton-transporting ATP synthase activity, rotational mechanism
CLM73_02155	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
CLM73_02160	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
CLM73_02165	COG0210	DNA helicase
CLM73_02170	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
CLM73_02180	COG2171	N-acyltransferase activity
CLM73_02190	COG2195	Cleaves the N-terminal amino acid of tripeptides
CLM73_02200	COG4608	Belongs to the ABC transporter superfamily
CLM73_02205	COG0444	Belongs to the ABC transporter superfamily
CLM73_02210	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CLM73_02215	COG0601	transmembrane transport
CLM73_02220	COG2988	succinylglutamate desuccinylase activity
CLM73_02225	COG0747	negative chemotaxis
CLM73_02235	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
CLM73_02240	COG1024	Enoyl-CoA hydratase
CLM73_02245	COG1024	Enoyl-CoA hydratase
CLM73_02270	COG1250	3-hydroxyacyl-CoA dehydrogenase
CLM73_02285	COG0583	DNA-binding transcription factor activity
CLM73_02315	COG0179	Fumarylacetoacetate (FAA) hydrolase
CLM73_02320	COG1802	Transcriptional regulator
CLM73_02325	COG0583	DNA-binding transcription factor activity
CLM73_02345	COG2918	glutathione biosynthetic process
CLM73_02360	COG2771	luxR family
CLM73_02370	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
CLM73_02375	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CLM73_02385	COG2721	sulfolactate sulfo-lyase activity
CLM73_02390	COG2721	sulfolactate sulfo-lyase activity
CLM73_02395	COG2188	Transcriptional regulator
CLM73_02400	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
CLM73_02405	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
CLM73_02405	COG2813	Specifically methylates the guanine in position
CLM73_02410	COG2223	nitrite transmembrane transporter activity
CLM73_02420	COG2860	membrane
CLM73_02425	COG1802	Transcriptional regulator
CLM73_02430	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
CLM73_02435	COG1984	allophanate hydrolase subunit 2
CLM73_02440	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
CLM73_02450	COG0583	DNA-binding transcription factor activity
CLM73_02455	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CLM73_02465	COG3241	Transfers electrons from cytochrome c551 to cytochrome oxidase
CLM73_02470	COG0642	Histidine kinase
CLM73_02485	COG0745	RESPONSE REGULATOR receiver
CLM73_02490	COG2226	methyltransferase
CLM73_02505	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
CLM73_02515	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
CLM73_02530	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
CLM73_02535	COG0351	phosphomethylpyrimidine kinase
CLM73_02540	COG2022	thiamine diphosphate biosynthetic process
CLM73_02545	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CLM73_02550	COG4771	TonB-dependent receptor
CLM73_02565	COG2186	Transcriptional regulator
CLM73_02570	COG1063	alcohol dehydrogenase
CLM73_02575	COG4948	Mandelate Racemase Muconate Lactonizing
CLM73_02580	COG0246	Mannitol dehydrogenase
CLM73_02585	COG2226	methyltransferase
CLM73_02595	COG1194	a g-specific adenine glycosylase
CLM73_02605	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
CLM73_02610	COG0477	Major facilitator Superfamily
CLM73_02620	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
CLM73_02625	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
CLM73_02650	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
CLM73_02665	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CLM73_02675	COG0154	amidase activity
CLM73_02690	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
CLM73_02715	COG0559	Belongs to the binding-protein-dependent transport system permease family
CLM73_02730	COG0410	ABC transporter
CLM73_02750	COG3706	GGDEF domain
CLM73_02765	COG1028	Short-chain dehydrogenase reductase Sdr
CLM73_02770	COG1024	Enoyl-CoA hydratase
CLM73_02795	COG2207	Transcriptional regulator
CLM73_02810	COG4638	Rieske (2fe-2S)
CLM73_02815	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
CLM73_02820	COG1335	isochorismatase
CLM73_02835	COG0741	lytic transglycosylase activity
CLM73_02840	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
CLM73_02860	COG1678	Uncharacterized ACR, COG1678
CLM73_02865	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
CLM73_02885	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
CLM73_02895	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CLM73_02900	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
CLM73_02910	COG3842	ATPase activity
CLM73_02915	COG1175	transmembrane transport
CLM73_02920	COG1840	ABC-type Fe3 transport system, periplasmic component
CLM73_02925	COG0642	Histidine kinase
CLM73_02935	COG0557	exoribonuclease II activity
CLM73_02940	COG3150	esterase
CLM73_02945	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
CLM73_02950	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CLM73_02955	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
CLM73_02960	COG0511	ligase activity, forming carbon-carbon bonds
CLM73_02965	COG0439	Biotin carboxylase
CLM73_02970	COG2264	protein methyltransferase activity
CLM73_03005	COG1696	Membrane protein involved in D-alanine export
CLM73_03040	COG1522	sequence-specific DNA binding
CLM73_03045	COG3181	Tripartite tricarboxylate transporter family receptor
CLM73_03065	COG0477	Major facilitator Superfamily
CLM73_03070	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
CLM73_03075	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CLM73_03075	COG1042	CoA-binding domain protein
CLM73_03075	COG0045	succinate-CoA ligase (ADP-forming) activity
CLM73_03080	COG1335	isochorismatase
CLM73_03085	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CLM73_03090	COG1116	anion transmembrane transporter activity
CLM73_03110	COG3028	Belongs to the UPF0307 family
CLM73_03115	COG0312	modulator of DNA gyrase
CLM73_03120	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
CLM73_03130	COG0559	Belongs to the binding-protein-dependent transport system permease family
CLM73_03135	COG4177	L-phenylalanine transmembrane transporter activity
CLM73_03150	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
CLM73_03155	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
CLM73_03160	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
CLM73_03170	COG0316	Belongs to the HesB IscA family
CLM73_03175	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
CLM73_03185	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
CLM73_03190	COG1881	PFAM PEBP family protein
CLM73_03195	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
CLM73_03200	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
CLM73_03205	COG2207	Transcriptional regulator
CLM73_03215	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CLM73_03215	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CLM73_03220	COG2766	serine protein kinase
CLM73_03225	COG2718	Belongs to the UPF0229 family
CLM73_03230	COG2719	SpoVR family
CLM73_03245	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CLM73_03250	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CLM73_03265	COG3181	Tripartite tricarboxylate transporter family receptor
CLM73_03290	COG3181	Tripartite tricarboxylate transporter family receptor
CLM73_03310	COG0741	lytic transglycosylase activity
CLM73_03310	COG1388	LysM domain
CLM73_03315	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CLM73_03320	COG2226	methyltransferase
CLM73_03325	COG0328	RNA-DNA hybrid ribonuclease activity
CLM73_03335	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CLM73_03340	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
CLM73_03355	COG1671	Belongs to the UPF0178 family
CLM73_03370	COG0786	glutamate:sodium symporter activity
CLM73_03380	COG0463	Glycosyl transferase, family 2
CLM73_03385	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
CLM73_03400	COG0583	DNA-binding transcription factor activity
CLM73_03415	COG0583	DNA-binding transcription factor activity
CLM73_03425	COG1346	cytolysis
CLM73_03435	COG0697	spore germination
CLM73_03440	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CLM73_03455	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
CLM73_03465	COG1522	sequence-specific DNA binding
CLM73_03480	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
CLM73_03485	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CLM73_03500	COG0823	Involved in the tonB-independent uptake of proteins
CLM73_03510	COG0848	biopolymer transport protein
CLM73_03515	COG0811	peptide transport
CLM73_03520	COG0824	Thioesterase
CLM73_03555	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CLM73_03565	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
CLM73_03570	COG2084	Dehydrogenase
CLM73_03575	COG0405	Gamma-glutamyltransferase
CLM73_03610	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
CLM73_03615	COG0129	dihydroxy-acid dehydratase activity
CLM73_03620	COG4654	Cytochrome c, class I
CLM73_03625	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CLM73_03635	COG1522	sequence-specific DNA binding
CLM73_03695	COG1473	amidohydrolase
CLM73_03715	COG2001	Belongs to the MraZ family
CLM73_03720	COG0275	rRNA processing
CLM73_03725	COG3116	cell division
CLM73_03735	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
CLM73_03740	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CLM73_03745	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
CLM73_03755	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
CLM73_03760	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
CLM73_03765	COG1181	Belongs to the D-alanine--D-alanine ligase family
CLM73_03770	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
CLM73_03780	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
CLM73_03785	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
CLM73_03795	COG0739	heme binding
CLM73_03800	COG0653	protein targeting
CLM73_03815	COG3181	Tripartite tricarboxylate transporter family receptor
CLM73_03820	COG0028	Belongs to the TPP enzyme family
CLM73_03830	COG1522	sequence-specific DNA binding
CLM73_03845	COG2239	Acts as a magnesium transporter
CLM73_03850	COG1607	acyl-coa hydrolase
CLM73_03855	COG2855	membrane
CLM73_03865	COG1473	amidohydrolase
CLM73_03870	COG0318	PFAM AMP-dependent synthetase and ligase
CLM73_03880	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CLM73_03880	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
CLM73_03885	COG1501	Belongs to the glycosyl hydrolase 31 family
CLM73_03890	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CLM73_03895	COG2011	ABC-type metal ion transport system permease component
CLM73_03920	COG2197	response regulator
CLM73_03945	COG2610	gluconate transmembrane transporter activity
CLM73_03960	COG0735	belongs to the Fur family
CLM73_03975	COG2818	Glycosylase
CLM73_03980	COG1368	sulfuric ester hydrolase activity
CLM73_03985	COG2982	Protein involved in outer membrane biogenesis
CLM73_04000	COG1028	Short-chain dehydrogenase reductase Sdr
CLM73_04020	COG0737	Belongs to the 5'-nucleotidase family
CLM73_04105	COG3501	Rhs element vgr protein
CLM73_04165	COG3501	Rhs element vgr protein
CLM73_04195	COG2154	pterin-4-alpha-carbinolamine dehydratase
CLM73_04210	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CLM73_04220	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
CLM73_04230	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
CLM73_04235	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CLM73_04240	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
CLM73_04245	COG1929	Belongs to the glycerate kinase type-1 family
CLM73_04250	COG0469	pyruvate kinase activity
CLM73_04255	COG0700	Nucleoside recognition
CLM73_04265	COG0242	peptide deformylase activity
CLM73_04285	COG0204	Acyl-transferase
CLM73_04290	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
CLM73_04295	COG0751	glycine-tRNA ligase activity
CLM73_04300	COG0752	glycyl-tRNA synthetase alpha subunit
CLM73_04325	COG1024	Enoyl-CoA hydratase
CLM73_04345	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CLM73_04355	COG1028	Short-chain dehydrogenase reductase Sdr
CLM73_04385	COG0318	PFAM AMP-dependent synthetase and ligase
CLM73_04400	COG1960	acyl-CoA dehydrogenase activity
CLM73_04405	COG1960	acyl-CoA dehydrogenase activity
CLM73_04410	COG1024	Enoyl-CoA hydratase
CLM73_04415	COG0583	DNA-binding transcription factor activity
CLM73_04420	COG3777	bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
CLM73_04435	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CLM73_04445	COG0617	tRNA 3'-terminal CCA addition
CLM73_04460	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
CLM73_04465	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
CLM73_04470	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
CLM73_04475	COG0586	Pfam SNARE associated Golgi protein
CLM73_04480	COG0860	N-Acetylmuramoyl-L-alanine amidase
CLM73_04485	COG0802	atpase or kinase
CLM73_04490	COG0114	fumarate hydratase activity
CLM73_04500	COG3181	Tripartite tricarboxylate transporter family receptor
CLM73_04510	COG0405	Gamma-glutamyltransferase
CLM73_04515	COG0531	amino acid
CLM73_04520	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CLM73_04530	COG1960	acyl-CoA dehydrogenase activity
CLM73_04535	COG0583	DNA-binding transcription factor activity
CLM73_04545	COG0579	oxidoreductase
CLM73_04555	COG0259	pyridoxamine-phosphate oxidase activity
CLM73_04570	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CLM73_04575	COG1136	(ABC) transporter
CLM73_04575	COG0577	efflux transmembrane transporter activity
CLM73_04580	COG1538	Outer membrane efflux protein
CLM73_04590	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
CLM73_04625	COG1595	DNA-templated transcription, initiation
CLM73_04640	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
CLM73_04650	COG0800	Aldolase
CLM73_04665	COG1216	Glycosyl transferase, family 2
CLM73_04665	COG0463	Glycosyl transferase, family 2
CLM73_04670	COG0410	ABC transporter
CLM73_04675	COG0411	ABC transporter
CLM73_04690	COG1028	Short-chain dehydrogenase reductase Sdr
CLM73_04695	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
CLM73_04710	COG0318	PFAM AMP-dependent synthetase and ligase
CLM73_04715	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
CLM73_04720	COG4638	Rieske (2fe-2S)
CLM73_04745	COG0747	negative chemotaxis
CLM73_04755	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CLM73_04760	COG0444	Belongs to the ABC transporter superfamily
CLM73_04765	COG4608	Belongs to the ABC transporter superfamily
CLM73_04780	COG0488	(ABC) transporter
CLM73_04795	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
CLM73_04800	COG2894	cell division
CLM73_04805	COG0850	regulation of cytokinetic process
CLM73_04810	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
CLM73_04815	COG1271	oxidase subunit
CLM73_04820	COG1294	oxidase, subunit
CLM73_04825	COG0514	ATP-dependent DNA helicase (RecQ)
CLM73_04835	COG0745	RESPONSE REGULATOR receiver
CLM73_04845	COG2255	four-way junction helicase activity
CLM73_04855	COG1090	epimerase
CLM73_04860	COG0632	four-way junction helicase activity
CLM73_04865	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
CLM73_04885	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CLM73_04895	COG0006	proline dipeptidase activity
CLM73_04910	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
CLM73_04915	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CLM73_04930	COG4783	chaperone-mediated protein folding
CLM73_04935	COG0429	hydrolase of the alpha beta-hydrolase fold
CLM73_04965	COG0513	Belongs to the DEAD box helicase family
CLM73_04980	COG1546	Belongs to the CinA family
CLM73_04980	COG1058	Belongs to the CinA family
CLM73_04985	COG1414	Transcriptional regulator
CLM73_05000	COG0167	dihydroorotate dehydrogenase activity
CLM73_05005	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
CLM73_05010	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
CLM73_05075	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
CLM73_05080	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CLM73_05085	COG0735	belongs to the Fur family
CLM73_05090	COG0497	DNA recombination
CLM73_05095	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
CLM73_05100	COG1420	regulation of RNA biosynthetic process
CLM73_05105	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
CLM73_05115	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
CLM73_05125	COG0443	Heat shock 70 kDa protein
CLM73_05130	COG0484	heat shock protein binding
CLM73_05140	COG3547	Transposase (IS116 IS110 IS902 family)
CLM73_05150	COG0612	Peptidase, M16
CLM73_05175	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CLM73_05205	COG0840	transmembrane signaling receptor activity
CLM73_05210	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CLM73_05225	COG0745	RESPONSE REGULATOR receiver
CLM73_05230	COG2205	protein histidine kinase activity
CLM73_05235	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
CLM73_05240	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
CLM73_05260	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CLM73_05280	COG1193	negative regulation of DNA recombination
CLM73_05285	COG0492	ferredoxin-NADP+ reductase activity
CLM73_05290	COG1674	ftsk spoiiie
CLM73_05295	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
CLM73_05305	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
CLM73_05310	COG0517	IMP dehydrogenase activity
CLM73_05310	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
CLM73_05330	COG0601	transmembrane transport
CLM73_05345	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CLM73_05350	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
CLM73_05355	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
CLM73_05385	COG0126	phosphoglycerate kinase activity
CLM73_05405	COG0477	Major facilitator Superfamily
CLM73_05410	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CLM73_05415	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CLM73_05435	COG1028	Short-chain dehydrogenase reductase Sdr
CLM73_05440	COG3022	response to hydroperoxide
CLM73_05445	COG1289	transmembrane transporter activity
CLM73_05450	COG0028	Belongs to the TPP enzyme family
CLM73_05455	COG0440	acetolactate synthase activity
CLM73_05460	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
CLM73_05465	COG1183	phosphatidylcholine synthase activity
CLM73_05475	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
CLM73_05480	COG1185	polyribonucleotide nucleotidyltransferase activity
CLM73_05490	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
CLM73_05520	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CLM73_05530	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CLM73_05545	COG3321	synthase
CLM73_05545	COG0604	alcohol dehydrogenase
CLM73_05550	COG0149	triose-phosphate isomerase activity
CLM73_05555	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
CLM73_05560	COG0583	DNA-binding transcription factor activity
CLM73_05565	COG5383	Protein conserved in bacteria
CLM73_05610	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
CLM73_05615	COG4608	Belongs to the ABC transporter superfamily
CLM73_05620	COG0444	Belongs to the ABC transporter superfamily
CLM73_05625	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CLM73_05630	COG0601	transmembrane transport
CLM73_05635	COG0747	negative chemotaxis
CLM73_05730	COG1595	DNA-templated transcription, initiation
CLM73_05740	COG4774	siderophore transport
CLM73_05770	COG2207	Transcriptional regulator
CLM73_05775	COG4221	oxidoreductase activity
CLM73_05800	COG2851	Citrate transporter
CLM73_05805	COG1028	Short-chain dehydrogenase reductase Sdr
CLM73_05825	COG1278	Cold shock
CLM73_05835	COG1595	DNA-templated transcription, initiation
CLM73_05865	COG3604	Transcriptional regulator
CLM73_05870	COG2846	Di-iron-containing protein involved in the repair of iron-sulfur clusters
CLM73_05880	COG2354	Protein conserved in bacteria
CLM73_05890	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CLM73_05905	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
CLM73_05910	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CLM73_05915	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CLM73_05930	COG0583	DNA-binding transcription factor activity
CLM73_05945	COG1597	lipid kinase activity
CLM73_05950	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
CLM73_05975	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CLM73_05980	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CLM73_05985	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CLM73_05990	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CLM73_05995	COG0649	NAD binding
CLM73_06000	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
CLM73_06010	COG1034	ATP synthesis coupled electron transport
CLM73_06015	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
CLM73_06020	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CLM73_06030	COG0713	ATP synthesis coupled electron transport
CLM73_06045	COG1007	ATP synthesis coupled electron transport
CLM73_06055	COG4774	siderophore transport
CLM73_06060	COG0560	Phosphoserine phosphatase
CLM73_06065	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
CLM73_06070	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
CLM73_06075	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
CLM73_06085	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CLM73_06090	COG0450	alkyl hydroperoxide reductase
CLM73_06095	COG2205	protein histidine kinase activity
CLM73_06100	COG0745	RESPONSE REGULATOR receiver
CLM73_06105	COG1214	PFAM Peptidase M22, glycoprotease
CLM73_06110	COG1573	uracil-dna glycosylase
CLM73_06115	COG0477	Major facilitator Superfamily
CLM73_06120	COG1196	nuclear chromosome segregation
CLM73_06130	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
CLM73_06135	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CLM73_06145	COG2917	probably involved in intracellular septation
CLM73_06150	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CLM73_06155	COG1122	ATPase activity
CLM73_06160	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
CLM73_06165	COG1268	BioY protein
CLM73_06180	COG0411	ABC transporter
CLM73_06190	COG1414	Transcriptional regulator
CLM73_06195	COG2084	Dehydrogenase
CLM73_06200	COG1012	belongs to the aldehyde dehydrogenase family
CLM73_06210	COG3181	Tripartite tricarboxylate transporter family receptor
CLM73_06220	COG0439	Biotin carboxylase
CLM73_06225	COG0511	ligase activity, forming carbon-carbon bonds
CLM73_06230	COG1024	Enoyl-CoA hydratase
CLM73_06230	COG1250	3-hydroxyacyl-CoA dehydrogenase
CLM73_06240	COG0183	Belongs to the thiolase family
CLM73_06250	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
CLM73_06270	COG0559	Belongs to the binding-protein-dependent transport system permease family
CLM73_06285	COG0410	ABC transporter
CLM73_06295	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CLM73_06325	COG0411	ABC transporter
CLM73_06330	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
CLM73_06335	COG2878	Part of a membrane complex involved in electron transport
CLM73_06350	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
CLM73_06360	COG0251	oxidation-reduction process
CLM73_06370	COG3228	Belongs to the MtfA family
CLM73_06375	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CLM73_06385	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CLM73_06390	COG0133	tryptophan synthase activity
CLM73_06395	COG0159	tryptophan synthase activity
CLM73_06400	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
CLM73_06405	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
CLM73_06415	COG2721	sulfolactate sulfo-lyase activity
CLM73_06430	COG1530	ribonuclease E activity
CLM73_06435	COG0564	pseudouridine synthase activity
CLM73_06445	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
CLM73_06450	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
CLM73_06455	COG3023	N-Acetylmuramoyl-L-alanine amidase
CLM73_06465	COG0424	maF-like protein
CLM73_06470	COG1399	metal-binding, possibly nucleic acid-binding protein
CLM73_06475	COG0333	Belongs to the bacterial ribosomal protein bL32 family
CLM73_06480	COG0416	fatty acid biosynthetic process
CLM73_06485	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CLM73_06490	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
CLM73_06495	COG1028	Short-chain dehydrogenase reductase Sdr
CLM73_06500	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CLM73_06505	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CLM73_06530	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CLM73_06535	COG0481	GTPase activity
CLM73_06540	COG0681	Belongs to the peptidase S26 family
CLM73_06545	COG0571	ribonuclease III activity
CLM73_06550	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
CLM73_06555	COG1381	Involved in DNA repair and RecF pathway recombination
CLM73_06575	COG3181	Tripartite tricarboxylate transporter family receptor
CLM73_06605	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
CLM73_06630	COG0583	DNA-binding transcription factor activity
CLM73_06640	COG0791	NLP P60 protein
CLM73_06645	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CLM73_06650	COG3193	protein, possibly involved in utilization of glycolate and propanediol
CLM73_06665	COG0697	spore germination
CLM73_06670	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
CLM73_06680	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
CLM73_06705	COG2153	protein acetylation
CLM73_06715	COG1446	asparaginase
CLM73_06720	COG4172	Belongs to the ABC transporter superfamily
CLM73_06725	COG0747	negative chemotaxis
CLM73_06735	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CLM73_06760	COG0504	CTP synthase activity
CLM73_06775	COG0148	phosphopyruvate hydratase activity
CLM73_06790	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
CLM73_06800	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CLM73_06850	COG0039	L-malate dehydrogenase activity
CLM73_06855	COG2188	Transcriptional regulator
CLM73_06860	COG2009	succinate dehydrogenase
CLM73_06865	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
CLM73_06870	COG1053	succinate dehydrogenase
CLM73_06875	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
CLM73_06880	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
CLM73_06885	COG0372	Belongs to the citrate synthase family
CLM73_06890	COG3539	Fimbrial protein
CLM73_06900	COG3121	Chaperone
CLM73_06910	COG3539	Fimbrial protein
CLM73_06915	COG3188	usher protein
CLM73_06920	COG3121	Chaperone
CLM73_06940	COG0280	phosphate acetyltransferase
CLM73_06940	COG0281	malic enzyme
CLM73_06950	COG1297	OPT oligopeptide transporter protein
CLM73_06970	COG0583	DNA-binding transcription factor activity
CLM73_06975	COG2814	Major facilitator Superfamily
CLM73_06980	COG2515	1-aminocyclopropane-1-carboxylate deaminase
CLM73_06985	COG1522	sequence-specific DNA binding
CLM73_06990	COG0567	Dehydrogenase, E1 component
CLM73_06995	COG0508	dehydrogenase complex catalyzes the overall conversion of
CLM73_07000	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CLM73_07005	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
CLM73_07010	COG1595	DNA-templated transcription, initiation
CLM73_07015	COG3712	iron ion homeostasis
CLM73_07020	COG4774	siderophore transport
CLM73_07040	COG0180	Tryptophanyl-tRNA synthetase
CLM73_07050	COG2183	response to ionizing radiation
CLM73_07055	COG1199	ATP-dependent helicase activity
CLM73_07065	COG0564	pseudouridine synthase activity
CLM73_07075	COG3243	poly(R)-hydroxyalkanoic acid synthase
CLM73_07080	COG1028	Short-chain dehydrogenase reductase Sdr
CLM73_07085	COG5394	Polyhydroxyalkanoate synthesis repressor PhaR
CLM73_07125	COG3237	CsbD-like
CLM73_07135	COG0189	ligase activity
CLM73_07135	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
CLM73_07140	COG1132	(ABC) transporter
CLM73_07155	COG2833	Protein of unknown function (DUF455)
CLM73_07160	COG2258	MOSC domain
CLM73_07165	COG2951	lytic endotransglycosylase activity
CLM73_07190	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CLM73_07200	COG1696	Membrane protein involved in D-alanine export
CLM73_07220	COG1215	transferase activity, transferring glycosyl groups
CLM73_07230	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
CLM73_07285	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
CLM73_07290	COG0732	type I restriction modification DNA specificity domain
CLM73_07295	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
CLM73_07335	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
CLM73_07350	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
CLM73_07355	COG0077	Prephenate dehydratase
CLM73_07355	COG1605	Chorismate mutase
CLM73_07370	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
CLM73_07375	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
CLM73_07395	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
CLM73_07400	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
CLM73_07405	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CLM73_07420	COG2951	lytic endotransglycosylase activity
CLM73_07425	COG0123	including yeast histone deacetylase and acetoin utilization protein
CLM73_07450	COG2985	domain, Protein
CLM73_07455	COG0450	alkyl hydroperoxide reductase
CLM73_07465	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
CLM73_07470	COG4208	sulfate ABC transporter
CLM73_07480	COG0175	sulfate reduction
CLM73_07510	COG0335	large ribosomal subunit rRNA binding
CLM73_07520	COG1162	GTPase activity
CLM73_07525	COG0501	Belongs to the peptidase M48B family
CLM73_07530	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
CLM73_07535	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
CLM73_07540	COG3327	negative regulation of DNA-templated transcription, initiation
CLM73_07545	COG3396	Phenylacetate-CoA oxygenase
CLM73_07550	COG3460	Phenylacetate-CoA oxygenase
CLM73_07555	COG3396	Phenylacetate-CoA oxygenase
CLM73_07560	COG2151	metal-sulfur cluster biosynthetic enzyme
CLM73_07565	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CLM73_07570	COG1012	belongs to the aldehyde dehydrogenase family
CLM73_07575	COG1024	Enoyl-CoA hydratase
CLM73_07580	COG2050	protein possibly involved in aromatic compounds catabolism
CLM73_07600	COG0254	rRNA binding
CLM73_07605	COG3483	tryptophan 2,3-dioxygenase activity
CLM73_07610	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
CLM73_07615	COG2003	Belongs to the UPF0758 family
CLM73_07630	COG0625	glutathione transferase activity
CLM73_07635	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CLM73_07640	COG0642	Histidine kinase
CLM73_07645	COG0745	RESPONSE REGULATOR receiver
CLM73_07660	COG0523	cobalamin synthesis protein
CLM73_07665	COG0583	DNA-binding transcription factor activity
CLM73_07675	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
CLM73_07680	COG1187	pseudouridine synthase activity
CLM73_07685	COG0779	Required for maturation of 30S ribosomal subunits
CLM73_07690	COG0195	Participates in both transcription termination and antitermination
CLM73_07690	COG2251	uridine kinase activity
CLM73_07695	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
CLM73_07700	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
CLM73_07705	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
CLM73_07720	COG0583	DNA-binding transcription factor activity
CLM73_07745	COG1283	sodium-dependent phosphate transmembrane transporter activity
CLM73_07750	COG1760	l-serine dehydratase
CLM73_07755	COG0501	Belongs to the peptidase M48B family
CLM73_07780	COG3842	ATPase activity
CLM73_07790	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CLM73_07795	COG1840	ABC-type Fe3 transport system, periplasmic component
CLM73_07815	COG3181	Tripartite tricarboxylate transporter family receptor
CLM73_07825	COG1722	exodeoxyribonuclease VII activity
CLM73_07830	COG0142	geranyltranstransferase activity
CLM73_07835	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
CLM73_07840	COG1469	GTP cyclohydrolase I activity
CLM73_07845	COG3739	integral membrane protein
CLM73_07850	COG0360	Binds together with S18 to 16S ribosomal RNA
CLM73_07855	COG2965	DNA replication, synthesis of RNA primer
CLM73_07860	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
CLM73_07865	COG0359	binds to the 23S rRNA
CLM73_07875	COG0305	Participates in initiation and elongation during chromosome replication
CLM73_07885	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
CLM73_07920	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CLM73_07970	COG0540	Belongs to the ATCase OTCase family
CLM73_07975	COG3706	GGDEF domain
CLM73_07995	COG0642	Histidine kinase
CLM73_08005	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
CLM73_08010	COG2137	regulation of response to DNA damage stimulus
CLM73_08015	COG0583	DNA-binding transcription factor activity
CLM73_08020	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
CLM73_08030	COG0045	succinate-CoA ligase (ADP-forming) activity
CLM73_08035	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
CLM73_08040	COG0861	Integral membrane protein TerC family
CLM73_08045	COG0861	Integral membrane protein TerC family
CLM73_08050	COG0181	hydroxymethylbilane synthase activity
CLM73_08070	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
CLM73_08085	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
CLM73_08090	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
CLM73_08100	COG0436	Aminotransferase
CLM73_08120	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
CLM73_08125	COG0308	aminopeptidase N
CLM73_08140	COG0312	modulator of DNA gyrase
CLM73_08145	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
CLM73_08150	COG0277	FAD linked oxidase domain protein
CLM73_08155	COG0277	FAD linked oxidase domain protein
CLM73_08160	COG0277	FAD linked oxidase domain protein
CLM73_08165	COG0247	lactate metabolic process
CLM73_08170	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
CLM73_08175	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
CLM73_08180	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
CLM73_08190	COG3181	Tripartite tricarboxylate transporter family receptor
CLM73_08195	COG0583	DNA-binding transcription factor activity
CLM73_08200	COG0482	sulfurtransferase activity
CLM73_08205	COG0730	response to heat
CLM73_08210	COG0625	glutathione transferase activity
CLM73_08220	COG3909	cytochrome
CLM73_08265	COG0697	spore germination
CLM73_08290	COG3636	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
CLM73_08295	COG3657	addiction module killer protein
CLM73_08305	COG1262	PFAM Formylglycine-generating sulfatase enzyme
CLM73_08325	COG0069	glutamate synthase activity
CLM73_08330	COG2391	methyltransferase activity
CLM73_08345	COG2153	protein acetylation
CLM73_08365	COG0557	exoribonuclease II activity
CLM73_08370	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CLM73_08375	COG0626	cystathionine gamma-synthase activity
CLM73_08380	COG3128	pkhd-type hydroxylase
CLM73_08385	COG0776	regulation of translation
CLM73_08410	COG0745	RESPONSE REGULATOR receiver
CLM73_08415	COG0642	Histidine kinase
CLM73_08420	COG3158	transport of potassium into the cell
CLM73_08425	COG0137	argininosuccinate synthase activity
CLM73_08430	COG0583	DNA-binding transcription factor activity
CLM73_08455	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
CLM73_08460	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
CLM73_08480	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
CLM73_08485	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
CLM73_08495	COG3642	lipopolysaccharide core region biosynthetic process
CLM73_08505	COG3842	ATPase activity
CLM73_08510	COG1176	ABC-type spermidine putrescine transport system, permease component I
CLM73_08515	COG1177	transmembrane transport
CLM73_08535	COG1322	Protein conserved in bacteria
CLM73_08545	COG1960	acyl-CoA dehydrogenase activity
CLM73_08550	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
CLM73_08555	COG0704	Plays a role in the regulation of phosphate uptake
CLM73_08565	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
CLM73_08570	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
CLM73_08570	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
CLM73_08575	COG0765	amino acid transport
CLM73_08580	COG0765	amino acid transport
CLM73_08590	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CLM73_08605	COG1028	Short-chain dehydrogenase reductase Sdr
CLM73_08610	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CLM73_08615	COG0583	DNA-binding transcription factor activity
CLM73_08625	COG0277	FAD linked oxidase domain protein
CLM73_08630	COG1643	Atp-dependent helicase
CLM73_08645	COG0438	transferase activity, transferring glycosyl groups
CLM73_08650	COG0726	polysaccharide deacetylase
CLM73_08665	COG0726	polysaccharide deacetylase
CLM73_08690	COG1132	(ABC) transporter
CLM73_08695	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
CLM73_08695	COG0475	glutathione-regulated potassium exporter activity
CLM73_08705	COG2203	Gaf domain
CLM73_08705	COG3706	GGDEF domain
CLM73_08705	COG4251	negative regulation of phosphorylation
CLM73_08705	COG5001	Diguanylate cyclase
CLM73_08715	COG1530	ribonuclease E activity
CLM73_08745	COG2204	response regulator
CLM73_08750	COG4191	Histidine kinase
CLM73_08755	COG1301	dicarboxylic acid transport
CLM73_08760	COG0424	maF-like protein
CLM73_08765	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
CLM73_08770	COG0799	negative regulation of ribosome biogenesis
CLM73_08775	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
CLM73_08780	COG0408	coproporphyrinogen oxidase activity
CLM73_08785	COG0151	Belongs to the GarS family
CLM73_08790	COG0217	transcriptional regulatory protein
CLM73_08795	COG0433	COG0433 Predicted ATPase
CLM73_08800	COG0473	3-isopropylmalate dehydrogenase activity
CLM73_08810	COG2814	Major facilitator Superfamily
CLM73_08815	COG1566	PFAM secretion protein HlyD family protein
CLM73_08825	COG1846	Transcriptional regulator
CLM73_08845	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
CLM73_08850	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
CLM73_08875	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
CLM73_08885	COG0187	DNA topoisomerase II activity
CLM73_08900	COG2311	Membrane
CLM73_08905	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CLM73_08925	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
CLM73_08930	COG0662	Cupin 2, conserved barrel domain protein
CLM73_08935	COG5285	phytanoyl-CoA dioxygenase
CLM73_08940	COG0633	Ferredoxin
CLM73_08940	COG3217	Mosc domain protein beta barrel domain protein
CLM73_08945	COG2076	Multidrug Resistance protein
CLM73_08950	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
CLM73_08960	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CLM73_09010	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
CLM73_09015	COG0425	Belongs to the sulfur carrier protein TusA family
CLM73_09025	COG0228	four-way junction DNA binding
CLM73_09030	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
CLM73_09035	COG0336	Belongs to the RNA methyltransferase TrmD family
CLM73_09040	COG1396	sequence-specific DNA binding
CLM73_09045	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CLM73_09050	COG0765	amino acid transport
CLM73_09060	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CLM73_09065	COG0525	valine-tRNA ligase activity
CLM73_09070	COG0105	UTP biosynthetic process
CLM73_09075	COG0820	rRNA (adenine-C2-)-methyltransferase activity
CLM73_09085	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
CLM73_09090	COG0124	histidyl-tRNA synthetase
CLM73_09095	COG2976	Protein conserved in bacteria
CLM73_09100	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CLM73_09105	COG1160	GTP binding
CLM73_09110	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
CLM73_09115	COG1923	regulation of RNA biosynthetic process
CLM73_09120	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
CLM73_09125	COG0330	HflC and HflK could
CLM73_09130	COG0330	HflC and HflK could
CLM73_09135	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
CLM73_09140	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
CLM73_09145	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
CLM73_09150	COG0828	Belongs to the bacterial ribosomal protein bS21 family
CLM73_09170	COG0582	viral genome integration into host DNA
CLM73_09210	COG4964	Belongs to the GSP D family
CLM73_09240	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
CLM73_09245	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CLM73_09255	COG1295	ribonuclease BN
CLM73_09265	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
CLM73_09275	COG2205	protein histidine kinase activity
CLM73_09290	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
CLM73_09295	COG4783	chaperone-mediated protein folding
CLM73_09320	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CLM73_09335	COG1538	Outer membrane efflux protein
CLM73_09340	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
CLM73_09345	COG0066	3-isopropylmalate dehydratase activity
CLM73_09350	COG0473	3-isopropylmalate dehydrogenase activity
CLM73_09355	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CLM73_09365	COG0101	tRNA pseudouridine synthase activity
CLM73_09370	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
CLM73_09375	COG0135	phosphoribosylanthranilate isomerase activity
CLM73_09395	COG0129	dihydroxy-acid dehydratase activity
CLM73_09400	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
CLM73_09405	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
CLM73_09410	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
CLM73_09415	COG1609	Transcriptional regulator
CLM73_09435	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CLM73_09440	COG4605	iron ion homeostasis
CLM73_09445	COG4604	ABC transporter, ATP-binding protein
CLM73_09450	COG4607	ABC-type enterochelin transport system periplasmic component
CLM73_09455	COG4774	siderophore transport
CLM73_09475	COG4172	Belongs to the ABC transporter superfamily
CLM73_09480	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CLM73_09485	COG0601	transmembrane transport
CLM73_09510	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CLM73_09515	COG2197	response regulator
CLM73_09520	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
CLM73_09525	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
CLM73_09530	COG0189	ligase activity
CLM73_09540	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CLM73_09545	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CLM73_09550	COG0004	ammonium transporteR
CLM73_09555	COG0347	Belongs to the P(II) protein family
CLM73_09560	COG2960	long-chain fatty acid transporting porin activity
CLM73_09575	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
CLM73_09585	COG0156	8-amino-7-oxononanoate synthase activity
CLM73_09595	COG0574	Belongs to the PEP-utilizing enzyme family
CLM73_09595	COG3848	Pyruvate phosphate dikinase
CLM73_09600	COG1181	Belongs to the D-alanine--D-alanine ligase family
CLM73_09620	COG2197	response regulator
CLM73_09655	COG0606	chelatase, subunit chli
CLM73_09660	COG0291	Belongs to the bacterial ribosomal protein bL35 family
CLM73_09665	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
CLM73_09670	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
CLM73_09675	COG0072	phenylalanine-tRNA ligase activity
CLM73_09675	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CLM73_09680	COG0776	regulation of translation
CLM73_09705	COG0384	phenazine biosynthesis protein PhzF
CLM73_09710	COG0456	acetyltransferase
CLM73_09735	COG1522	sequence-specific DNA binding
CLM73_09775	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CLM73_09785	COG1116	anion transmembrane transporter activity
CLM73_09800	COG0583	DNA-binding transcription factor activity
CLM73_09815	COG5265	(ABC) transporter
CLM73_09820	COG0656	L-ascorbic acid biosynthetic process
CLM73_09835	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
CLM73_09850	COG2223	nitrite transmembrane transporter activity
CLM73_09860	COG1215	transferase activity, transferring glycosyl groups
CLM73_09865	COG0726	polysaccharide deacetylase
CLM73_09865	COG1649	PFAM Uncharacterised BCR, COG1649
CLM73_09870	COG0457	Tetratricopeptide repeat
CLM73_09875	COG5001	Diguanylate cyclase
CLM73_09875	COG3300	MHYT domain
CLM73_09900	COG1610	YqeY-like protein
CLM73_09910	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CLM73_09915	COG1028	Short-chain dehydrogenase reductase Sdr
CLM73_09925	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CLM73_09960	COG1216	Glycosyl transferase, family 2
CLM73_09965	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
CLM73_09975	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CLM73_09980	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CLM73_09995	COG2091	lysine biosynthetic process via aminoadipic acid
CLM73_10000	COG1017	nitric oxide dioxygenase activity
CLM73_10000	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CLM73_10010	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CLM73_10015	COG0697	spore germination
CLM73_10020	COG0506	proline dehydrogenase activity
CLM73_10035	COG0583	DNA-binding transcription factor activity
CLM73_10055	COG2814	Major facilitator Superfamily
CLM73_10060	COG1960	acyl-CoA dehydrogenase activity
CLM73_10065	COG0318	PFAM AMP-dependent synthetase and ligase
CLM73_10100	COG3245	cytochrome
CLM73_10105	COG1280	lysine exporter protein (LysE YggA)
CLM73_10120	COG1280	lysine exporter protein (LysE YggA)
CLM73_10140	COG0697	spore germination
CLM73_10145	COG3670	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
CLM73_10150	COG0697	spore germination
CLM73_10165	COG1024	Enoyl-CoA hydratase
CLM73_10170	COG1028	Short-chain dehydrogenase reductase Sdr
CLM73_10180	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CLM73_10185	COG1274	phosphoenolpyruvate carboxykinase (GTP) activity
CLM73_10190	COG0667	Aldo Keto reductase
CLM73_10195	COG0583	DNA-binding transcription factor activity
CLM73_10205	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
CLM73_10210	COG0745	RESPONSE REGULATOR receiver
CLM73_10210	COG3706	GGDEF domain
CLM73_10275	COG4235	cytochrome complex assembly
CLM73_10285	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CLM73_10295	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
CLM73_10315	COG4133	protoheme IX ABC transporter activity
CLM73_10320	COG3005	denitrification pathway
CLM73_10325	COG3043	anaerobic respiration
CLM73_10345	COG3246	L-lysine catabolic process to acetate
CLM73_10350	COG1250	3-hydroxyacyl-CoA dehydrogenase
CLM73_10355	COG0583	DNA-binding transcription factor activity
CLM73_10380	COG1595	DNA-templated transcription, initiation
CLM73_10390	COG0129	dihydroxy-acid dehydratase activity
CLM73_10395	COG3181	Tripartite tricarboxylate transporter family receptor
CLM73_10400	COG5001	Diguanylate cyclase
CLM73_10405	COG1024	Enoyl-CoA hydratase
CLM73_10410	COG1028	Short-chain dehydrogenase reductase Sdr
CLM73_10415	COG0583	DNA-binding transcription factor activity
CLM73_10420	COG2610	gluconate transmembrane transporter activity
CLM73_10425	COG2226	methyltransferase
CLM73_10445	COG2188	Transcriptional regulator
CLM73_10450	COG0318	PFAM AMP-dependent synthetase and ligase
CLM73_10470	COG4977	sequence-specific DNA binding
CLM73_10485	COG1280	lysine exporter protein (LysE YggA)
CLM73_10490	COG5265	(ABC) transporter
CLM73_10495	COG1132	(ABC) transporter
CLM73_10510	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CLM73_10515	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CLM73_10565	COG1487	ribonuclease activity
CLM73_10570	COG4691	Plasmid stability protein
CLM73_10575	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
CLM73_10600	COG2186	Transcriptional regulator
CLM73_10610	COG0307	riboflavin synthase, alpha
CLM73_10625	COG0747	negative chemotaxis
CLM73_10630	COG0601	transmembrane transport
CLM73_10640	COG4172	Belongs to the ABC transporter superfamily
CLM73_10650	COG0657	acetylesterase activity
CLM73_10655	COG2808	Putative FMN-binding domain
CLM73_10660	COG0235	Class ii aldolase
CLM73_10665	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
CLM73_10670	COG4166	transmembrane transport
CLM73_10680	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CLM73_10700	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CLM73_10700	COG2207	Transcriptional regulator
CLM73_10710	COG0789	Transcriptional regulator
CLM73_10730	COG4774	siderophore transport
CLM73_10740	COG0022	dehydrogenase e1 component
CLM73_10770	COG0165	Argininosuccinate lyase
CLM73_10775	COG0668	transmembrane transport
CLM73_10835	COG2165	general secretion pathway protein
CLM73_10865	COG0583	DNA-binding transcription factor activity
CLM73_10880	COG0601	transmembrane transport
CLM73_10890	COG4172	Belongs to the ABC transporter superfamily
CLM73_10895	COG1280	lysine exporter protein (LysE YggA)
CLM73_10900	COG4681	YaeQ
CLM73_10910	COG0300	oxidoreductase activity
CLM73_10930	COG5001	Diguanylate cyclase
CLM73_10930	COG3447	MASE1 domain protein
CLM73_10930	COG5002	protein histidine kinase activity
CLM73_10935	COG2188	Transcriptional regulator
CLM73_10965	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
CLM73_10970	COG0066	3-isopropylmalate dehydratase activity
CLM73_10985	COG1335	isochorismatase
CLM73_10990	COG3976	FMN-binding domain protein
CLM73_10990	COG1053	succinate dehydrogenase
CLM73_11000	COG3161	chorismate lyase activity
CLM73_11005	COG1187	pseudouridine synthase activity
CLM73_11010	COG0583	DNA-binding transcription factor activity
CLM73_11025	COG1538	Outer membrane efflux protein
CLM73_11035	COG1999	signal sequence binding
CLM73_11040	COG0339	signal peptide processing
CLM73_11050	COG4566	intracellular signal transduction
CLM73_11065	COG0508	dehydrogenase complex catalyzes the overall conversion of
CLM73_11070	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CLM73_11075	COG2807	transmembrane transport
CLM73_11080	COG1846	Transcriptional regulator
CLM73_11090	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
CLM73_11090	COG4797	methyltransferase
CLM73_11100	COG1191	sigma factor activity
CLM73_11120	COG1360	Flagellar Motor Protein
CLM73_11135	COG0835	chemotaxis
CLM73_11140	COG0840	transmembrane signaling receptor activity
CLM73_11145	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
CLM73_11150	COG2201	protein-glutamate methylesterase activity
CLM73_11155	COG0745	RESPONSE REGULATOR receiver
CLM73_11160	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
CLM73_11175	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
CLM73_11190	COG2747	anti-sigma28 factor FlgM
CLM73_11205	COG1558	bacterial-type flagellum-dependent cell motility
CLM73_11210	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
CLM73_11215	COG1749	Flagellar hook protein flgE
CLM73_11220	COG4787	bacterial-type flagellum-dependent cell motility
CLM73_11225	COG4786	Flagellar basal body rod
CLM73_11230	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
CLM73_11235	COG1706	bacterial-type flagellum-dependent cell motility
CLM73_11245	COG1256	bacterial-type flagellum assembly
CLM73_11260	COG0840	transmembrane signaling receptor activity
CLM73_11270	COG0840	transmembrane signaling receptor activity
CLM73_11275	COG0840	transmembrane signaling receptor activity
CLM73_11295	COG3190	flagellar
CLM73_11330	COG1317	bacterial-type flagellum organization
CLM73_11335	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CLM73_11340	COG1766	The M ring may be actively involved in energy transduction
CLM73_11345	COG1677	Flagellar hook-basal body complex protein FliE
CLM73_11355	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
CLM73_11375	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
CLM73_11380	COG1334	flagellar protein FlaG
CLM73_11395	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CLM73_11400	COG3181	Tripartite tricarboxylate transporter family receptor
CLM73_11410	COG0285	dihydrofolate synthase activity
CLM73_11430	COG1451	nucleotide metabolic process
CLM73_11435	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
CLM73_11445	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
CLM73_11450	COG0024	Methionine aminopeptidase
CLM73_11455	COG0052	Belongs to the universal ribosomal protein uS2 family
CLM73_11460	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
CLM73_11465	COG0528	UMP kinase activity
CLM73_11470	COG0233	cytoplasmic translational termination
CLM73_11475	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
CLM73_11480	COG0575	Belongs to the CDS family
CLM73_11485	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
CLM73_11490	COG0750	zinc metalloprotease
CLM73_11495	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CLM73_11500	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
CLM73_11505	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CLM73_11510	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
CLM73_11520	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CLM73_11525	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
CLM73_11530	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CLM73_11555	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
CLM73_11565	COG3501	Rhs element vgr protein
CLM73_11590	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CLM73_11590	COG2169	Transcriptional regulator
CLM73_11595	COG0518	GMP synthase (glutamine-hydrolyzing) activity
CLM73_11595	COG0519	Catalyzes the synthesis of GMP from XMP
CLM73_11605	COG0330	HflC and HflK could
CLM73_11610	COG0745	RESPONSE REGULATOR receiver
CLM73_11610	COG3706	GGDEF domain
CLM73_11615	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
CLM73_11620	COG2867	negative regulation of translational initiation
CLM73_11630	COG1960	acyl-CoA dehydrogenase activity
CLM73_11635	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
CLM73_11660	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
CLM73_11665	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
CLM73_11670	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
CLM73_11675	COG0084	hydrolase, TatD family'
CLM73_11690	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CLM73_11700	COG1126	abc transporter atp-binding protein
CLM73_11705	COG0010	Belongs to the arginase family
CLM73_11710	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
CLM73_11735	COG0625	glutathione transferase activity
CLM73_11745	COG1522	sequence-specific DNA binding
CLM73_11750	COG0386	Belongs to the glutathione peroxidase family
CLM73_11760	COG0840	transmembrane signaling receptor activity
CLM73_11770	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CLM73_11815	COG0513	Belongs to the DEAD box helicase family
CLM73_11825	COG1414	Transcriptional regulator
CLM73_11840	COG0747	negative chemotaxis
CLM73_11845	COG0601	transmembrane transport
CLM73_11850	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CLM73_11860	COG4608	Belongs to the ABC transporter superfamily
CLM73_11865	COG1228	amidohydrolase
CLM73_11890	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CLM73_11895	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
CLM73_11900	COG4521	taurine ABC transporter
CLM73_11920	COG1966	Carbon starvation protein
CLM73_11925	COG2879	small protein
CLM73_11935	COG0783	Belongs to the Dps family
CLM73_11945	COG0384	phenazine biosynthesis protein PhzF
CLM73_11960	COG4172	Belongs to the ABC transporter superfamily
CLM73_11965	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CLM73_11970	COG0601	transmembrane transport
CLM73_11975	COG0747	negative chemotaxis
CLM73_11985	COG4774	siderophore transport
CLM73_11990	COG3712	iron ion homeostasis
CLM73_12005	COG0583	DNA-binding transcription factor activity
CLM73_12015	COG0154	amidase activity
CLM73_12025	COG0251	oxidation-reduction process
CLM73_12030	COG0583	DNA-binding transcription factor activity
CLM73_12035	COG0820	rRNA (adenine-C2-)-methyltransferase activity
CLM73_12040	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CLM73_12045	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CLM73_12055	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
CLM73_12060	COG4117	Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein)
CLM73_12065	COG0745	RESPONSE REGULATOR receiver
CLM73_12070	COG5002	protein histidine kinase activity
CLM73_12075	COG0574	Belongs to the PEP-utilizing enzyme family
CLM73_12075	COG3848	Pyruvate phosphate dikinase
CLM73_12085	COG0697	spore germination
CLM73_12095	COG4941	Belongs to the sigma-70 factor family
CLM73_12105	COG3795	YCII-related domain
CLM73_12115	COG3795	YCII-related domain
CLM73_12130	COG3047	cAMP biosynthetic process
CLM73_12130	COG2885	chlorophyll binding
CLM73_12135	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
CLM73_12140	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CLM73_12150	COG1683	Conserved Protein
CLM73_12165	COG1309	transcriptional regulator
CLM73_12175	COG3181	Tripartite tricarboxylate transporter family receptor
CLM73_12180	COG0668	transmembrane transport
CLM73_12200	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CLM73_12210	COG4608	Belongs to the ABC transporter superfamily
CLM73_12215	COG0444	Belongs to the ABC transporter superfamily
CLM73_12220	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CLM73_12225	COG0601	transmembrane transport
CLM73_12235	COG1802	Transcriptional regulator
CLM73_12240	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
CLM73_12250	COG0667	Aldo Keto reductase
CLM73_12260	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CLM73_12265	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CLM73_12285	COG1414	Transcriptional regulator
CLM73_12290	COG4106	trans-aconitate 2-methyltransferase activity
CLM73_12300	COG2764	glyoxalase bleomycin resistance protein dioxygenase
CLM73_12325	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
CLM73_12335	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CLM73_12340	COG0765	amino acid transport
CLM73_12345	COG0765	amino acid transport
CLM73_12365	COG0587	DNA-directed DNA polymerase activity
CLM73_12380	COG0833	amino acid
CLM73_12385	COG0400	carboxylic ester hydrolase activity
CLM73_12395	COG1028	Short-chain dehydrogenase reductase Sdr
CLM73_12405	COG0028	Belongs to the TPP enzyme family
CLM73_12420	COG1566	PFAM secretion protein HlyD family protein
CLM73_12440	COG0720	synthase
CLM73_12445	COG0602	queuosine metabolic process
CLM73_12465	COG1902	pentaerythritol trinitrate reductase activity
CLM73_12495	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
CLM73_12510	COG0842	Transport permease protein
CLM73_12515	COG1131	(ABC) transporter
CLM73_12525	COG1309	transcriptional regulator
CLM73_12530	COG2130	NADP-dependent
CLM73_12555	COG3842	ATPase activity
CLM73_12560	COG3842	ATPase activity
CLM73_12570	COG0395	ABC-type sugar transport system, permease component
CLM73_12595	COG2199	diguanylate cyclase activity
CLM73_12595	COG2203	Gaf domain
CLM73_12600	COG3634	alkyl hydroperoxide reductase activity
CLM73_12610	COG3387	PFAM Glycoside hydrolase 15-related
CLM73_12615	COG1960	acyl-CoA dehydrogenase activity
CLM73_12650	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CLM73_12655	COG0420	3'-5' exonuclease activity
CLM73_12680	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
CLM73_12680	COG2111	Na H antiporter
CLM73_12685	COG1006	Multisubunit Na H antiporter MnhC subunit
CLM73_12690	COG0651	ATP synthesis coupled electron transport
CLM73_12695	COG1863	multisubunit Na H antiporter MnhE subunit
CLM73_12700	COG2212	antiporter activity
CLM73_12720	COG0590	tRNA wobble adenosine to inosine editing
CLM73_12725	COG1619	proteins homologs of microcin C7 resistance protein MccF
CLM73_12730	COG0488	(ABC) transporter
CLM73_12735	COG2814	Major facilitator Superfamily
CLM73_12740	COG1116	anion transmembrane transporter activity
CLM73_12765	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CLM73_12770	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CLM73_12780	COG2252	PERMEase
CLM73_12785	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
CLM73_12790	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
CLM73_12795	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
CLM73_12800	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
CLM73_12825	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CLM73_12830	COG0789	Transcriptional regulator
CLM73_12840	COG2608	mercury ion transmembrane transporter activity
CLM73_12845	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
CLM73_12845	COG0678	peroxiredoxin activity
CLM73_12855	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
CLM73_12860	COG0584	glycerophosphoryl diester phosphodiesterase
CLM73_12870	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CLM73_12880	COG4181	ATPase activity
CLM73_12900	COG0583	DNA-binding transcription factor activity
CLM73_12915	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
CLM73_12930	COG4336	lyase activity
CLM73_12940	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CLM73_12980	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CLM73_12985	COG0765	amino acid transport
CLM73_12990	COG1126	abc transporter atp-binding protein
CLM73_12995	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CLM73_13000	COG1758	RNA polymerase activity
CLM73_13005	COG0194	GDP metabolic process
CLM73_13010	COG1028	Short-chain dehydrogenase reductase Sdr
CLM73_13015	COG0791	NLP P60 protein
CLM73_13020	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
CLM73_13025	COG0833	amino acid
CLM73_13030	COG1561	YicC-like family, N-terminal region
CLM73_13035	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
CLM73_13045	COG1960	acyl-CoA dehydrogenase activity
CLM73_13050	COG0840	transmembrane signaling receptor activity
CLM73_13055	COG4943	cyclic-guanylate-specific phosphodiesterase activity
CLM73_13060	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
CLM73_13065	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CLM73_13075	COG3852	Histidine kinase
CLM73_13080	COG2204	response regulator
CLM73_13085	COG0583	DNA-binding transcription factor activity
CLM73_13090	COG1741	Belongs to the pirin family
CLM73_13095	COG1741	Belongs to the pirin family
CLM73_13105	COG0596	Alpha beta hydrolase
CLM73_13120	COG1028	Short-chain dehydrogenase reductase Sdr
CLM73_13130	COG3842	ATPase activity
CLM73_13140	COG1840	ABC-type Fe3 transport system, periplasmic component
CLM73_13175	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
CLM73_13185	COG0783	Belongs to the Dps family
CLM73_13190	COG0300	oxidoreductase activity
CLM73_13205	COG1596	polysaccharide export
CLM73_13220	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
CLM73_13225	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
CLM73_13260	COG0156	8-amino-7-oxononanoate synthase activity
CLM73_13280	COG3842	ATPase activity
CLM73_13285	COG0395	ABC-type sugar transport system, permease component
CLM73_13290	COG1175	transmembrane transport
CLM73_13295	COG1653	transport
CLM73_13300	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
CLM73_13310	COG0559	Belongs to the binding-protein-dependent transport system permease family
CLM73_13325	COG0410	ABC transporter
CLM73_13330	COG1794	racemase activity, acting on amino acids and derivatives
CLM73_13335	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
CLM73_13345	COG0583	DNA-binding transcription factor activity
CLM73_13350	COG0625	glutathione transferase activity
CLM73_13355	COG2133	pyrroloquinoline quinone binding
CLM73_13365	COG0697	spore germination
CLM73_13370	COG2363	Small membrane protein
CLM73_13400	COG1414	Transcriptional regulator
CLM73_13405	COG0010	Belongs to the arginase family
CLM73_13410	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
CLM73_13415	COG1464	Belongs to the NlpA lipoprotein family
CLM73_13425	COG1408	metallophosphoesterase
CLM73_13435	COG0688	phosphatidylethanolamine metabolic process
CLM73_13440	COG0488	(ABC) transporter
CLM73_13460	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
CLM73_13465	COG3300	MHYT domain
CLM73_13465	COG5001	Diguanylate cyclase
CLM73_13480	COG2814	Major facilitator Superfamily
CLM73_13495	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
CLM73_13500	COG2204	response regulator
CLM73_13505	COG2204	response regulator
CLM73_13540	COG1028	Short-chain dehydrogenase reductase Sdr
CLM73_13570	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CLM73_13580	COG1289	transmembrane transporter activity
CLM73_13585	COG2199	diguanylate cyclase activity
CLM73_13585	COG2200	EAL domain
CLM73_13595	COG1640	4-alpha-glucanotransferase
CLM73_13600	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
CLM73_13610	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
CLM73_13615	COG0366	Alpha amylase catalytic
CLM73_13620	COG0366	Alpha amylase catalytic
CLM73_13625	COG0297	glycogen (starch) synthase activity
CLM73_13630	COG0028	Belongs to the TPP enzyme family
CLM73_13675	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CLM73_13680	COG3568	Endonuclease Exonuclease Phosphatase
CLM73_13695	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CLM73_13700	COG4172	Belongs to the ABC transporter superfamily
CLM73_13710	COG0659	secondary active sulfate transmembrane transporter activity
CLM73_13735	COG1253	flavin adenine dinucleotide binding
CLM73_13750	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
CLM73_13770	COG2814	Major facilitator Superfamily
CLM73_13780	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CLM73_13805	COG4774	siderophore transport
CLM73_13810	COG3712	iron ion homeostasis
CLM73_13820	COG2199	diguanylate cyclase activity
CLM73_13825	COG0745	RESPONSE REGULATOR receiver
CLM73_13825	COG3706	GGDEF domain
CLM73_13835	COG0028	Belongs to the TPP enzyme family
CLM73_13845	COG2197	response regulator
CLM73_13855	COG4943	cyclic-guanylate-specific phosphodiesterase activity
CLM73_13860	COG0784	Response regulator, receiver
CLM73_13860	COG2205	protein histidine kinase activity
CLM73_13880	COG0628	permease
CLM73_13885	COG1187	pseudouridine synthase activity
CLM73_13905	COG1959	2 iron, 2 sulfur cluster binding
CLM73_13915	COG0531	amino acid
CLM73_13935	COG3119	arylsulfatase activity
CLM73_13945	COG1595	DNA-templated transcription, initiation
CLM73_13950	COG3712	iron ion homeostasis
CLM73_13955	COG4772	TonB-dependent receptor
CLM73_13965	COG1393	Belongs to the ArsC family
CLM73_13970	COG0798	PFAM Bile acid sodium symporter
CLM73_13980	COG0583	DNA-binding transcription factor activity
CLM73_13990	COG1028	Short-chain dehydrogenase reductase Sdr
CLM73_14000	COG0583	DNA-binding transcription factor activity
CLM73_14015	COG0047	phosphoribosylformylglycinamidine synthase activity
CLM73_14090	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
CLM73_14095	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
CLM73_14150	COG3119	arylsulfatase activity
CLM73_14185	COG0714	Associated with various cellular activities
CLM73_14190	COG1262	PFAM Formylglycine-generating sulfatase enzyme
CLM73_14205	COG1120	ATPase activity
CLM73_14215	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CLM73_14220	COG4993	Dehydrogenase
CLM73_14240	COG4771	TonB-dependent receptor
CLM73_14245	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
CLM73_14260	COG0745	RESPONSE REGULATOR receiver
CLM73_14285	COG0288	reversible hydration of carbon dioxide
CLM73_14305	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
CLM73_14315	COG3038	cytochrome b561
CLM73_14405	COG1121	(ABC) transporter
CLM73_14410	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CLM73_14430	COG2721	sulfolactate sulfo-lyase activity
CLM73_14475	COG0028	Belongs to the TPP enzyme family
CLM73_14480	COG0583	DNA-binding transcription factor activity
CLM73_14490	COG3181	Tripartite tricarboxylate transporter family receptor
CLM73_14495	COG3386	PFAM SMP-30 Gluconolaconase
CLM73_14500	COG2721	sulfolactate sulfo-lyase activity
CLM73_14515	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CLM73_14520	COG3547	Transposase (IS116 IS110 IS902 family)
CLM73_14525	COG3181	Tripartite tricarboxylate transporter family receptor
CLM73_14540	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CLM73_14550	COG4597	amino acid ABC transporter
CLM73_14555	COG0765	amino acid transport
CLM73_14560	COG1126	abc transporter atp-binding protein
CLM73_14575	COG0604	alcohol dehydrogenase
CLM73_14575	COG1028	Short-chain dehydrogenase reductase Sdr
CLM73_14575	COG3321	synthase
CLM73_14595	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CLM73_14600	COG0318	PFAM AMP-dependent synthetase and ligase
CLM73_14615	COG1116	anion transmembrane transporter activity
CLM73_14620	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CLM73_14630	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CLM73_14645	COG2301	Belongs to the HpcH HpaI aldolase family
CLM73_14665	COG2130	NADP-dependent
CLM73_14675	COG4774	siderophore transport
CLM73_14685	COG0745	RESPONSE REGULATOR receiver
CLM73_14695	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CLM73_14700	COG3241	Transfers electrons from cytochrome c551 to cytochrome oxidase
CLM73_14705	COG1120	ATPase activity
CLM73_14715	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
CLM73_14730	COG0390	transport system, permease component
CLM73_14735	COG0577	efflux transmembrane transporter activity
CLM73_14735	COG1136	(ABC) transporter
CLM73_14740	COG1126	abc transporter atp-binding protein
CLM73_14745	COG0765	amino acid transport
CLM73_14755	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CLM73_14815	COG4566	intracellular signal transduction
CLM73_14830	COG2897	thiosulfate sulfurtransferase activity
CLM73_14840	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
CLM73_14840	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
CLM73_14850	COG0783	Belongs to the Dps family
CLM73_14855	COG4191	Histidine kinase
CLM73_14860	COG4566	intracellular signal transduction
CLM73_14875	COG0583	DNA-binding transcription factor activity
CLM73_14920	COG1028	Short-chain dehydrogenase reductase Sdr
CLM73_14935	COG1028	Short-chain dehydrogenase reductase Sdr
CLM73_14950	COG1335	isochorismatase
CLM73_14965	COG3181	Tripartite tricarboxylate transporter family receptor
CLM73_14980	COG2267	carboxylic ester hydrolase activity
CLM73_14995	COG1473	amidohydrolase
CLM73_15015	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
CLM73_15040	COG0583	DNA-binding transcription factor activity
CLM73_15055	COG2885	chlorophyll binding
CLM73_15065	COG0625	glutathione transferase activity
CLM73_15110	COG2267	carboxylic ester hydrolase activity
CLM73_15125	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CLM73_15135	COG1028	Short-chain dehydrogenase reductase Sdr
CLM73_15150	COG3706	GGDEF domain
CLM73_15160	COG0384	phenazine biosynthesis protein PhzF
CLM73_15165	COG0477	Major facilitator Superfamily
CLM73_15175	COG0251	oxidation-reduction process
CLM73_15200	COG0693	protein deglycase activity
CLM73_15220	COG4774	siderophore transport
CLM73_15275	COG2249	NAD(P)H dehydrogenase (quinone) activity
CLM73_15285	COG2226	methyltransferase
CLM73_15295	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
CLM73_15320	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CLM73_15325	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CLM73_15330	COG1116	anion transmembrane transporter activity
CLM73_15330	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CLM73_15355	COG1104	cysteine desulfurase activity
CLM73_15360	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CLM73_15365	COG4597	amino acid ABC transporter
CLM73_15385	COG2197	response regulator
CLM73_15390	COG3850	Histidine kinase
CLM73_15395	COG1763	Mo-molybdopterin cofactor biosynthetic process
CLM73_15400	COG0288	reversible hydration of carbon dioxide
CLM73_15405	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
CLM73_15410	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CLM73_15415	COG2181	nitrate reductase activity
CLM73_15420	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
CLM73_15425	COG1140	nitrate reductase beta subunit
CLM73_15430	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
CLM73_15435	COG2223	nitrite transmembrane transporter activity
CLM73_15470	COG1538	Outer membrane efflux protein
CLM73_15475	COG1566	PFAM secretion protein HlyD family protein
CLM73_15490	COG0583	DNA-binding transcription factor activity
CLM73_15525	COG1328	CTP reductase activity
CLM73_15540	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CLM73_15560	COG2070	2-Nitropropane dioxygenase
CLM73_15565	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CLM73_15575	COG0583	DNA-binding transcription factor activity
CLM73_15585	COG0583	DNA-binding transcription factor activity
CLM73_15590	COG1028	Short-chain dehydrogenase reductase Sdr
CLM73_15595	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CLM73_15610	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
CLM73_15620	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
CLM73_15625	COG0154	amidase activity
CLM73_15630	COG3181	Tripartite tricarboxylate transporter family receptor
CLM73_15635	COG3048	D-serine ammonia-lyase activity
CLM73_15645	COG4773	Receptor
CLM73_15675	COG2885	chlorophyll binding
CLM73_15690	COG0024	Methionine aminopeptidase
CLM73_15695	COG2211	Major facilitator Superfamily
CLM73_15705	COG3181	Tripartite tricarboxylate transporter family receptor
CLM73_15710	COG1028	Short-chain dehydrogenase reductase Sdr
CLM73_15755	COG0625	glutathione transferase activity
CLM73_15760	COG2032	superoxide dismutase activity
CLM73_15765	COG2733	membrane
CLM73_15770	COG0628	permease
CLM73_15775	COG0583	DNA-binding transcription factor activity
CLM73_15780	COG1250	3-hydroxyacyl-CoA dehydrogenase
CLM73_15780	COG1024	Enoyl-CoA hydratase
CLM73_15785	COG0183	Belongs to the thiolase family
CLM73_15790	COG1960	acyl-CoA dehydrogenase activity
CLM73_15795	COG1960	acyl-CoA dehydrogenase activity
CLM73_15800	COG0318	PFAM AMP-dependent synthetase and ligase
CLM73_15820	COG0477	Major facilitator Superfamily
CLM73_15840	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
CLM73_15850	COG1012	belongs to the aldehyde dehydrogenase family
CLM73_15855	COG4032	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
CLM73_15855	COG0028	Belongs to the TPP enzyme family
CLM73_15885	COG0583	DNA-binding transcription factor activity
CLM73_15895	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
CLM73_15895	COG0473	3-isopropylmalate dehydrogenase activity
CLM73_15910	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
CLM73_15915	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CLM73_15925	COG1012	belongs to the aldehyde dehydrogenase family
CLM73_15930	COG3181	Tripartite tricarboxylate transporter family receptor
CLM73_15940	COG0583	DNA-binding transcription factor activity
CLM73_15970	COG0559	Belongs to the binding-protein-dependent transport system permease family
CLM73_15995	COG0583	DNA-binding transcription factor activity
CLM73_16005	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CLM73_16010	COG3842	ATPase activity
CLM73_16015	COG1840	ABC-type Fe3 transport system, periplasmic component
CLM73_16020	COG4149	molybdate abc transporter
CLM73_16025	COG3706	GGDEF domain
CLM73_16025	COG2203	Gaf domain
CLM73_16025	COG5001	Diguanylate cyclase
CLM73_16025	COG4251	negative regulation of phosphorylation
CLM73_16030	COG2201	protein-glutamate methylesterase activity
CLM73_16055	COG0840	transmembrane signaling receptor activity
CLM73_16060	COG0154	amidase activity
CLM73_16065	COG2382	esterase
CLM73_16120	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
CLM73_16130	COG1028	Short-chain dehydrogenase reductase Sdr
CLM73_16145	COG0518	GMP synthase (glutamine-hydrolyzing) activity
CLM73_16145	COG0519	Catalyzes the synthesis of GMP from XMP
CLM73_16195	COG0583	DNA-binding transcription factor activity
CLM73_16205	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CLM73_16230	COG2072	flavoprotein involved in K transport
CLM73_16235	COG0601	transmembrane transport
CLM73_16240	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CLM73_16245	COG0444	Belongs to the ABC transporter superfamily
CLM73_16250	COG4608	Belongs to the ABC transporter superfamily
CLM73_16255	COG0747	negative chemotaxis
CLM73_16330	COG2130	NADP-dependent
CLM73_16335	COG0583	DNA-binding transcription factor activity
CLM73_16375	COG1335	isochorismatase
CLM73_16400	COG2353	YceI-like domain
CLM73_16425	COG0583	DNA-binding transcription factor activity
CLM73_16445	COG0047	phosphoribosylformylglycinamidine synthase activity
CLM73_16445	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
CLM73_16455	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
CLM73_16460	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
CLM73_16470	COG0613	PHP domain protein
CLM73_16480	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
CLM73_16490	COG0583	DNA-binding transcription factor activity
CLM73_16495	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CLM73_16495	COG2146	nitrite reductase [NAD(P)H] activity
CLM73_16505	COG2116	formate transmembrane transporter activity
CLM73_16510	COG0515	serine threonine protein kinase
CLM73_16520	COG3707	response regulator
CLM73_16540	COG1846	Transcriptional regulator
CLM73_16560	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
CLM73_16565	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
CLM73_16575	COG1850	ribulose-bisphosphate carboxylase activity
CLM73_16595	COG0583	DNA-binding transcription factor activity
CLM73_16600	COG3181	Tripartite tricarboxylate transporter family receptor
CLM73_16615	COG3179	chitinase
CLM73_16630	COG0737	Belongs to the 5'-nucleotidase family
CLM73_16635	COG4604	ABC transporter, ATP-binding protein
CLM73_16640	COG4605	iron ion homeostasis
CLM73_16645	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CLM73_16650	COG4607	ABC-type enterochelin transport system periplasmic component
CLM73_16655	COG4771	TonB-dependent receptor
CLM73_16660	COG0745	RESPONSE REGULATOR receiver
CLM73_16670	COG4771	TonB-dependent receptor
CLM73_16680	COG1136	(ABC) transporter
CLM73_16700	COG2271	Major facilitator Superfamily
CLM73_16710	COG1028	Short-chain dehydrogenase reductase Sdr
CLM73_16715	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
CLM73_16730	COG0183	Belongs to the thiolase family
CLM73_16735	COG1022	Amp-dependent synthetase and ligase
CLM73_16740	COG0410	ABC transporter
CLM73_16770	COG1803	Methylglyoxal synthase
CLM73_16775	COG2975	iron-sulfur cluster assembly
CLM73_16780	COG0633	Ferredoxin
CLM73_16785	COG0443	Heat shock 70 kDa protein
CLM73_16790	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
CLM73_16795	COG0316	Belongs to the HesB IscA family
CLM73_16800	COG0822	iron-sulfur transferase activity
CLM73_16805	COG1104	cysteine desulfurase activity
CLM73_16815	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
CLM73_16820	COG0556	nucleotide-excision repair
CLM73_16830	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
CLM73_16835	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
CLM73_16840	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
CLM73_16845	COG0740	serine-type endopeptidase activity
CLM73_16850	COG0544	peptidyl-prolyl cis-trans isomerase activity
CLM73_16855	COG0501	Belongs to the peptidase M48B family
CLM73_16865	COG1278	Cold shock
CLM73_16880	COG1278	Cold shock
CLM73_16915	COG0583	DNA-binding transcription factor activity
CLM73_16935	COG3008	intermembrane lipid transfer
CLM73_16940	COG0456	acetyltransferase
CLM73_16950	COG2877	3-deoxy-8-phosphooctulonate synthase activity
CLM73_16955	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
CLM73_16965	COG0277	FAD linked oxidase domain protein
CLM73_16970	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
CLM73_16975	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
CLM73_16980	COG2271	Major facilitator Superfamily
CLM73_16990	COG2200	EAL domain
CLM73_17005	COG2171	N-acyltransferase activity
CLM73_17015	COG2890	protein-(glutamine-N5) methyltransferase activity
CLM73_17020	COG0488	(ABC) transporter
CLM73_17030	COG0210	DNA helicase
CLM73_17050	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
CLM73_17055	COG0196	riboflavin kinase activity
CLM73_17060	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
CLM73_17065	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
CLM73_17070	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
CLM73_17125	COG1902	pentaerythritol trinitrate reductase activity
CLM73_17130	COG1126	abc transporter atp-binding protein
CLM73_17135	COG0765	amino acid transport
CLM73_17140	COG0765	amino acid transport
CLM73_17145	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CLM73_17155	COG1764	response to oxidative stress
CLM73_17175	COG2271	Major facilitator Superfamily
CLM73_17180	COG1802	Transcriptional regulator
CLM73_17185	COG3181	Tripartite tricarboxylate transporter family receptor
CLM73_17190	COG1024	Enoyl-CoA hydratase
CLM73_17195	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CLM73_17205	COG0411	ABC transporter
CLM73_17215	COG0559	Belongs to the binding-protein-dependent transport system permease family
CLM73_17225	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
CLM73_17225	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
CLM73_17225	COG0506	proline dehydrogenase activity
CLM73_17235	COG3008	intermembrane lipid transfer
CLM73_17240	COG2995	paraquat-inducible protein a
CLM73_17245	COG0542	response to heat
CLM73_17250	COG4953	penicillin-binding protein 1C
CLM73_17260	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
CLM73_17265	COG1278	Cold shock
CLM73_17275	COG0183	Belongs to the thiolase family
CLM73_17280	COG0038	chloride channel
CLM73_17290	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
CLM73_17300	COG1570	exodeoxyribonuclease VII activity
CLM73_17305	COG0811	peptide transport
CLM73_17315	COG1663	tetraacyldisaccharide 4'-kinase activity
CLM73_17320	COG2835	tetraacyldisaccharide 4'-kinase activity
CLM73_17325	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
CLM73_17330	COG0563	adenylate kinase activity
CLM73_17345	COG0728	peptidoglycan biosynthetic process
CLM73_17355	COG0268	Binds directly to 16S ribosomal RNA
CLM73_17360	COG0583	DNA-binding transcription factor activity
CLM73_17365	COG0019	diaminopimelate decarboxylase activity
CLM73_17375	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
CLM73_17380	COG2186	Transcriptional regulator
CLM73_17390	COG3181	Tripartite tricarboxylate transporter family receptor
CLM73_17395	COG3181	Tripartite tricarboxylate transporter family receptor
CLM73_17400	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CLM73_17420	COG0730	response to heat
CLM73_17445	COG4774	siderophore transport
CLM73_17450	COG3712	iron ion homeostasis
CLM73_17455	COG1595	DNA-templated transcription, initiation
CLM73_17465	COG1234	tRNA 3'-trailer cleavage
CLM73_17475	COG1028	Short-chain dehydrogenase reductase Sdr
CLM73_17480	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CLM73_17490	COG1562	ergosterol biosynthetic process
CLM73_17500	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CLM73_17525	COG0583	DNA-binding transcription factor activity
CLM73_17535	COG2188	Transcriptional regulator
CLM73_17540	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CLM73_17565	COG1477	protein flavinylation
CLM73_17580	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
CLM73_17595	COG5564	TIM-barrel signal transduction protein
CLM73_17600	COG5441	Belongs to the UPF0261 family
CLM73_17615	COG0542	response to heat
CLM73_17625	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CLM73_17660	COG0494	nUDIX hydrolase
CLM73_17665	COG0443	Heat shock 70 kDa protein
CLM73_17675	COG3530	Putative quorum-sensing-regulated virulence factor
CLM73_17725	COG1522	sequence-specific DNA binding
CLM73_17730	COG0488	(ABC) transporter
CLM73_17755	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CLM73_17780	COG2951	lytic endotransglycosylase activity
CLM73_17800	COG0583	DNA-binding transcription factor activity
CLM73_17805	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
CLM73_17815	COG3181	Tripartite tricarboxylate transporter family receptor
CLM73_17820	COG3181	Tripartite tricarboxylate transporter family receptor
CLM73_17830	COG1712	Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate
CLM73_17850	COG3181	Tripartite tricarboxylate transporter family receptor
CLM73_17870	COG2326	polyphosphate kinase activity
CLM73_17890	COG2011	ABC-type metal ion transport system permease component
CLM73_17895	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CLM73_17900	COG1464	Belongs to the NlpA lipoprotein family
CLM73_17920	COG1228	amidohydrolase
CLM73_17925	COG0596	Alpha beta hydrolase
CLM73_17930	COG0179	Fumarylacetoacetate (FAA) hydrolase
CLM73_17935	COG2207	Transcriptional regulator
CLM73_17955	COG0840	transmembrane signaling receptor activity
CLM73_17960	COG2169	Transcriptional regulator
CLM73_17985	COG1272	protein, Hemolysin III
CLM73_17995	COG0842	Transport permease protein
CLM73_18000	COG1131	(ABC) transporter
CLM73_18015	COG0348	domain, Protein
CLM73_18035	COG3278	Belongs to the heme-copper respiratory oxidase family
CLM73_18050	COG4106	trans-aconitate 2-methyltransferase activity
CLM73_18050	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
CLM73_18055	COG0583	DNA-binding transcription factor activity
CLM73_18060	COG1064	alcohol dehydrogenase
CLM73_18070	COG2224	Isocitrate lyase
CLM73_18075	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
CLM73_18075	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
CLM73_18080	COG1858	cytochrome C peroxidase
CLM73_18090	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
CLM73_18095	COG0322	excinuclease ABC activity
CLM73_18100	COG1472	Belongs to the glycosyl hydrolase 3 family
CLM73_18105	COG0736	holo-[acyl-carrier-protein] synthase activity
CLM73_18110	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
CLM73_18115	COG1538	Outer membrane efflux protein
CLM73_18120	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CLM73_18125	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CLM73_18150	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
CLM73_18155	COG4149	molybdate abc transporter
CLM73_18160	COG0725	ABC transporter, periplasmic molybdate-binding protein
CLM73_18165	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
CLM73_18185	COG4262	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
CLM73_18190	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CLM73_18190	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
CLM73_18195	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CLM73_18200	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
CLM73_18205	COG4120	Belongs to the binding-protein-dependent transport system permease family
CLM73_18215	COG0667	Aldo Keto reductase
CLM73_18225	COG0318	PFAM AMP-dependent synthetase and ligase
CLM73_18230	COG1024	Enoyl-CoA hydratase
CLM73_18240	COG1802	Transcriptional regulator
CLM73_18260	COG1960	acyl-CoA dehydrogenase activity
CLM73_18265	COG1960	acyl-CoA dehydrogenase activity
CLM73_18275	COG0045	succinate-CoA ligase (ADP-forming) activity
CLM73_18275	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CLM73_18275	COG1042	CoA-binding domain protein
CLM73_18280	COG1024	Enoyl-CoA hydratase
CLM73_18290	COG0183	Belongs to the thiolase family
CLM73_18295	COG1024	Enoyl-CoA hydratase
CLM73_18300	COG3181	Tripartite tricarboxylate transporter family receptor
CLM73_18305	COG1960	acyl-CoA dehydrogenase activity
CLM73_18315	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CLM73_18320	COG0583	DNA-binding transcription factor activity
CLM73_18325	COG0517	IMP dehydrogenase activity
CLM73_18370	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
CLM73_18390	COG3384	dioxygenase
CLM73_18405	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
CLM73_18420	COG2204	response regulator
CLM73_18460	COG4964	Belongs to the GSP D family
CLM73_18510	COG1846	Transcriptional regulator
CLM73_18515	COG4172	Belongs to the ABC transporter superfamily
CLM73_18520	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CLM73_18525	COG0601	transmembrane transport
CLM73_18540	COG0598	Magnesium transport protein CorA
CLM73_18545	COG0210	DNA helicase
CLM73_18560	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
CLM73_18565	COG1012	belongs to the aldehyde dehydrogenase family
CLM73_18575	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
CLM73_18580	COG1045	serine acetyltransferase
CLM73_18585	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
CLM73_18590	COG0166	Belongs to the GPI family
CLM73_18610	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
CLM73_18635	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CLM73_18655	COG0438	transferase activity, transferring glycosyl groups
CLM73_18665	COG0110	maltose O-acetyltransferase activity
CLM73_18670	COG0297	glycogen (starch) synthase activity
CLM73_18675	COG2197	response regulator
CLM73_18680	COG2197	response regulator
CLM73_18715	COG1024	Enoyl-CoA hydratase
CLM73_18715	COG1250	3-hydroxyacyl-CoA dehydrogenase
CLM73_18720	COG0183	Belongs to the thiolase family
CLM73_18735	COG0318	PFAM AMP-dependent synthetase and ligase
CLM73_18740	COG4774	siderophore transport
CLM73_18750	COG3395	kinase activity
CLM73_18755	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
CLM73_18770	COG3485	protocatechuate 3,4-dioxygenase
CLM73_18775	COG3485	protocatechuate 3,4-dioxygenase
CLM73_18780	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
CLM73_18785	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
CLM73_18790	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
CLM73_18795	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
CLM73_18810	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
CLM73_18825	COG3181	Tripartite tricarboxylate transporter family receptor
CLM73_18830	COG1609	Transcriptional regulator
CLM73_18845	COG1595	DNA-templated transcription, initiation
CLM73_18865	COG1764	response to oxidative stress
CLM73_18875	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CLM73_18880	COG0583	DNA-binding transcription factor activity
CLM73_18885	COG2186	Transcriptional regulator
CLM73_18890	COG0179	Fumarylacetoacetate (FAA) hydrolase
CLM73_18895	COG3181	Tripartite tricarboxylate transporter family receptor
CLM73_18900	COG0318	PFAM AMP-dependent synthetase and ligase
CLM73_18905	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
CLM73_18915	COG1024	Enoyl-CoA hydratase
CLM73_18925	COG3181	Tripartite tricarboxylate transporter family receptor
CLM73_18935	COG1414	Transcriptional regulator
CLM73_18945	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
CLM73_18960	COG0583	DNA-binding transcription factor activity
CLM73_19000	COG2603	Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA
CLM73_19005	COG0583	DNA-binding transcription factor activity
CLM73_19010	COG3181	Tripartite tricarboxylate transporter family receptor
CLM73_19065	COG0825	malonyl-CoA metabolic process
CLM73_19075	COG0215	cysteine-tRNA ligase activity
CLM73_19090	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CLM73_19095	COG1968	undecaprenyl-diphosphatase activity
CLM73_19100	COG1253	flavin adenine dinucleotide binding
CLM73_19115	COG4263	nitrous-oxide reductase activity
CLM73_19130	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
CLM73_19145	COG0625	glutathione transferase activity
CLM73_19150	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CLM73_19150	COG1017	nitric oxide dioxygenase activity
CLM73_19175	COG0668	transmembrane transport
CLM73_19205	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CLM73_19210	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CLM73_19230	COG1802	Transcriptional regulator
CLM73_19255	COG3360	Dodecin
CLM73_19265	COG0583	DNA-binding transcription factor activity
CLM73_19270	COG1028	Short-chain dehydrogenase reductase Sdr
CLM73_19295	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
CLM73_19300	COG2850	peptidyl-arginine hydroxylation
CLM73_19310	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
CLM73_19315	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CLM73_19320	COG1994	Peptidase M50
CLM73_19325	COG0009	L-threonylcarbamoyladenylate synthase
CLM73_19330	COG2321	neutral zinc metallopeptidase
CLM73_19385	COG3863	Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
CLM73_19400	COG0471	metal ion transport
CLM73_19400	COG0490	domain, Protein
CLM73_19440	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CLM73_19465	COG0784	Response regulator, receiver
CLM73_19465	COG4191	Histidine kinase
CLM73_19470	COG1210	Utp--glucose-1-phosphate uridylyltransferase
CLM73_19505	COG1028	Short-chain dehydrogenase reductase Sdr
CLM73_19515	COG3685	Protein conserved in bacteria
CLM73_19555	COG0387	Pfam Sodium calcium exchanger
CLM73_19590	COG0467	Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction
CLM73_19605	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
CLM73_19605	COG2755	lipolytic protein G-D-S-L family
CLM73_19670	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CLM73_19690	COG2084	Dehydrogenase
CLM73_19710	COG1802	Transcriptional regulator
CLM73_19740	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CLM73_19745	COG0519	Catalyzes the synthesis of GMP from XMP
CLM73_19745	COG0518	GMP synthase (glutamine-hydrolyzing) activity
CLM73_19760	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
CLM73_19765	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
CLM73_19775	COG2080	2 iron, 2 sulfur cluster binding
CLM73_19785	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
CLM73_19800	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
CLM73_19815	COG1228	amidohydrolase
CLM73_19840	COG3501	Rhs element vgr protein
CLM73_19860	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CLM73_19865	COG0765	amino acid transport
CLM73_19875	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CLM73_19880	COG1126	abc transporter atp-binding protein
CLM73_19885	COG1012	belongs to the aldehyde dehydrogenase family
CLM73_19900	COG2197	response regulator
CLM73_19905	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CLM73_19910	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CLM73_19915	COG1116	anion transmembrane transporter activity
CLM73_19920	COG1513	Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide
CLM73_19925	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
CLM73_19935	COG1396	sequence-specific DNA binding
CLM73_19940	COG0235	Class ii aldolase
CLM73_19950	COG3181	Tripartite tricarboxylate transporter family receptor
CLM73_19955	COG3181	Tripartite tricarboxylate transporter family receptor
CLM73_19960	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CLM73_19965	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
CLM73_19980	COG0183	Belongs to the thiolase family
CLM73_19985	COG1024	Enoyl-CoA hydratase
CLM73_19985	COG1250	3-hydroxyacyl-CoA dehydrogenase
CLM73_20000	COG2084	Dehydrogenase
CLM73_20005	COG3181	Tripartite tricarboxylate transporter family receptor
CLM73_20015	COG1595	DNA-templated transcription, initiation
CLM73_20040	COG0384	phenazine biosynthesis protein PhzF
CLM73_20055	COG1028	Short-chain dehydrogenase reductase Sdr
CLM73_20070	COG1609	Transcriptional regulator
CLM73_20080	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CLM73_20090	COG3181	Tripartite tricarboxylate transporter family receptor
CLM73_20095	COG3618	amidohydrolase
CLM73_20100	COG2249	NAD(P)H dehydrogenase (quinone) activity
CLM73_20105	COG1024	Enoyl-CoA hydratase
CLM73_20110	COG3246	L-lysine catabolic process to acetate
CLM73_20115	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CLM73_20125	COG1960	acyl-CoA dehydrogenase activity
CLM73_20130	COG2301	Belongs to the HpcH HpaI aldolase family
CLM73_20140	COG0410	ABC transporter
CLM73_20145	COG0559	Belongs to the binding-protein-dependent transport system permease family
CLM73_20155	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CLM73_20165	COG0179	Fumarylacetoacetate (FAA) hydrolase
CLM73_20195	COG0300	oxidoreductase activity
CLM73_20210	COG1959	2 iron, 2 sulfur cluster binding
CLM73_20280	COG1126	abc transporter atp-binding protein
CLM73_20285	COG0765	amino acid transport
CLM73_20295	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CLM73_20305	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
CLM73_20320	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CLM73_20330	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CLM73_20345	COG4774	siderophore transport
CLM73_20350	COG3712	iron ion homeostasis
CLM73_20355	COG1595	DNA-templated transcription, initiation
CLM73_20370	COG1802	Transcriptional regulator
CLM73_20385	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CLM73_20390	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CLM73_20400	COG3181	Tripartite tricarboxylate transporter family receptor
CLM73_20410	COG0410	ABC transporter
CLM73_20415	COG0411	ABC transporter
CLM73_20425	COG0559	Belongs to the binding-protein-dependent transport system permease family
CLM73_20435	COG1028	Short-chain dehydrogenase reductase Sdr
CLM73_20440	COG3777	bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
CLM73_20450	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CLM73_20480	COG1546	Belongs to the CinA family
CLM73_20480	COG1058	Belongs to the CinA family
CLM73_20490	COG0500	methyltransferase
CLM73_20505	COG1201	RNA secondary structure unwinding
CLM73_20510	COG1793	dna ligase
CLM73_20515	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
CLM73_20515	COG1793	dna ligase
CLM73_20540	COG4774	siderophore transport
CLM73_20545	COG3712	iron ion homeostasis
CLM73_20550	COG1595	DNA-templated transcription, initiation
CLM73_20560	COG3706	GGDEF domain
CLM73_20570	COG1408	metallophosphoesterase
CLM73_20585	COG0583	DNA-binding transcription factor activity
CLM73_20610	COG3448	diguanylate cyclase activity
CLM73_20610	COG4175	Glycine betaine
CLM73_20615	COG4176	ABC-type proline glycine betaine transport system permease component
CLM73_20625	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CLM73_20635	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CLM73_20650	COG0318	PFAM AMP-dependent synthetase and ligase
CLM73_20670	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CLM73_20685	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CLM73_20705	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CLM73_20725	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
CLM73_20730	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
CLM73_20735	COG2814	Major facilitator Superfamily
CLM73_20740	COG0227	Belongs to the bacterial ribosomal protein bL28 family
CLM73_20745	COG0267	Belongs to the bacterial ribosomal protein bL33 family
CLM73_20775	COG1686	Belongs to the peptidase S11 family
CLM73_20785	COG1846	Transcriptional regulator
CLM73_20790	COG2814	Major facilitator Superfamily
CLM73_20795	COG0495	leucyl-tRNA aminoacylation
CLM73_20810	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
CLM73_20825	COG0154	amidase activity
CLM73_20835	COG0477	Major facilitator Superfamily
CLM73_20845	COG1250	3-hydroxyacyl-CoA dehydrogenase
CLM73_20860	COG0583	DNA-binding transcription factor activity
CLM73_20870	COG0235	Class ii aldolase
CLM73_20895	COG0583	DNA-binding transcription factor activity
CLM73_20900	COG0427	acetyl-CoA hydrolase
CLM73_20905	COG0583	DNA-binding transcription factor activity
CLM73_20910	COG1511	domain protein
CLM73_20910	COG3264	Mechanosensitive ion channel
CLM73_20965	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
CLM73_20970	COG3958	Transketolase
CLM73_20975	COG3959	Transketolase, thiamine diphosphate binding domain
CLM73_20980	COG1802	Transcriptional regulator
CLM73_20985	COG0371	Dehydrogenase
CLM73_20995	COG1250	3-hydroxyacyl-CoA dehydrogenase
CLM73_21000	COG1028	Short-chain dehydrogenase reductase Sdr
CLM73_21010	COG0559	Belongs to the binding-protein-dependent transport system permease family
CLM73_21025	COG0604	alcohol dehydrogenase
CLM73_21025	COG3321	synthase
CLM73_21025	COG1028	Short-chain dehydrogenase reductase Sdr
CLM73_21030	COG1028	Short-chain dehydrogenase reductase Sdr
CLM73_21035	COG0500	methyltransferase
CLM73_21065	COG0667	Aldo Keto reductase
CLM73_21070	COG2207	Transcriptional regulator
CLM73_21080	COG0583	DNA-binding transcription factor activity
CLM73_21085	COG1335	isochorismatase
CLM73_21105	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CLM73_21110	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CLM73_21115	COG0583	DNA-binding transcription factor activity
CLM73_21160	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
CLM73_21185	COG0248	Ppx GppA phosphatase
CLM73_21195	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CLM73_21205	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CLM73_21210	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
CLM73_21215	COG1534	Rna-binding protein
CLM73_21220	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
CLM73_21225	COG2233	PERMEase
CLM73_21235	COG1840	ABC-type Fe3 transport system, periplasmic component
CLM73_21245	COG3842	ATPase activity
CLM73_21255	COG0406	alpha-ribazole phosphatase activity
CLM73_21265	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
CLM73_21270	COG0505	Belongs to the CarA family
CLM73_21275	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
CLM73_21305	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CLM73_21315	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CLM73_21320	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CLM73_21325	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
CLM73_21335	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
CLM73_21345	COG1074	ATP-dependent DNA helicase activity
CLM73_21370	COG1686	Belongs to the peptidase S11 family
CLM73_21375	COG2814	Major facilitator Superfamily
CLM73_21400	COG1609	Transcriptional regulator
CLM73_21415	COG0277	FAD linked oxidase domain protein
CLM73_21420	COG0311	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
CLM73_21425	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
CLM73_21430	COG4974	Belongs to the 'phage' integrase family
CLM73_21435	COG0583	DNA-binding transcription factor activity
CLM73_21440	COG0028	Belongs to the TPP enzyme family
CLM73_21445	COG1960	acyl-CoA dehydrogenase activity
CLM73_21480	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
CLM73_21515	COG0411	ABC transporter
CLM73_21525	COG0028	Belongs to the TPP enzyme family
CLM73_21540	COG1595	DNA-templated transcription, initiation
CLM73_21545	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CLM73_21560	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
CLM73_21565	COG1414	Transcriptional regulator
CLM73_21570	COG0009	L-threonylcarbamoyladenylate synthase
CLM73_21575	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
CLM73_21580	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
CLM73_21585	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
CLM73_21590	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
CLM73_21630	COG0583	DNA-binding transcription factor activity
CLM73_21635	COG0405	Gamma-glutamyltransferase
CLM73_21660	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
CLM73_21670	COG0739	heme binding
CLM73_21680	COG0521	Mo-molybdopterin cofactor biosynthetic process
CLM73_21690	COG0306	phosphate transporter
CLM73_21730	COG0625	glutathione transferase activity
CLM73_21745	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CLM73_21750	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
CLM73_21760	COG0126	phosphoglycerate kinase activity
CLM73_21765	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
CLM73_21770	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
CLM73_21775	COG1385	rRNA (uridine-N3-)-methyltransferase activity
CLM73_21780	COG2732	(Barnase) inhibitor
CLM73_21790	COG0280	phosphate acetyltransferase
CLM73_21790	COG0281	malic enzyme
CLM73_21800	COG0436	Aminotransferase
CLM73_21805	COG0741	lytic transglycosylase activity
CLM73_21810	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
CLM73_21825	COG4575	ribosome binding
CLM73_21835	COG0243	molybdopterin cofactor binding
CLM73_21840	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CLM73_21845	COG1116	anion transmembrane transporter activity
CLM73_21850	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CLM73_21855	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CLM73_21870	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
CLM73_21870	COG1648	precorrin-2 dehydrogenase activity
CLM73_21875	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
CLM73_21880	COG2027	D-alanyl-D-alanine carboxypeptidase
CLM73_21885	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
CLM73_21890	COG0343	queuine tRNA-ribosyltransferase activity
CLM73_21895	COG1862	Preprotein translocase
CLM73_21900	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CLM73_21905	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CLM73_21925	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
CLM73_21930	COG1702	phosphate starvation-inducible protein PhoH
CLM73_21935	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
CLM73_21940	COG4535	Mg2 and Co2 transporter CorC
CLM73_21945	COG0815	Transfers the fatty acyl group on membrane lipoproteins
CLM73_21950	COG0667	Aldo Keto reductase
CLM73_21985	COG1366	Belongs to the anti-sigma-factor antagonist family
CLM73_21985	COG2202	Pas domain
CLM73_21990	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
CLM73_21995	COG0697	spore germination
CLM73_22005	COG0678	peroxiredoxin activity
CLM73_22015	COG0412	Dienelactone hydrolase
CLM73_22025	COG0315	cyclic pyranopterin monophosphate synthase activity
CLM73_22035	COG0314	molybdopterin synthase activity
CLM73_22040	COG0521	Mo-molybdopterin cofactor biosynthetic process
CLM73_22045	COG0303	'Molybdopterin
CLM73_22050	COG0746	molybdenum cofactor guanylyltransferase activity
CLM73_22055	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
CLM73_22075	COG3383	formate dehydrogenase (NAD+) activity
CLM73_22080	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
CLM73_22100	COG1595	DNA-templated transcription, initiation
CLM73_22105	COG3712	iron ion homeostasis
CLM73_22125	COG4221	oxidoreductase activity
CLM73_22145	COG0583	DNA-binding transcription factor activity
CLM73_22150	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
CLM73_22170	COG1028	Short-chain dehydrogenase reductase Sdr
CLM73_22205	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CLM73_22235	COG0411	ABC transporter
CLM73_22240	COG0410	ABC transporter
CLM73_22250	COG3501	Rhs element vgr protein
CLM73_22260	COG0671	phosphoesterase, PA-phosphatase related
CLM73_22275	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CLM73_22285	COG0583	DNA-binding transcription factor activity
CLM73_22290	COG1666	GTP binding
CLM73_22295	COG1120	ATPase activity
CLM73_22300	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CLM73_22305	COG4558	Periplasmic binding protein
CLM73_22310	COG3720	iron ion transport
CLM73_22320	COG3712	iron ion homeostasis
CLM73_22325	COG1595	DNA-templated transcription, initiation
CLM73_22340	COG2378	regulation of single-species biofilm formation
CLM73_22350	COG1113	amino acid transport
CLM73_22360	COG1522	sequence-specific DNA binding
CLM73_22365	COG1272	protein, Hemolysin III
CLM73_22370	COG3191	aminopeptidase activity
CLM73_22375	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CLM73_22380	COG0765	amino acid transport
CLM73_22385	COG1126	abc transporter atp-binding protein
CLM73_22400	COG1999	signal sequence binding
CLM73_22415	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
CLM73_22425	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
CLM73_22430	COG1845	cytochrome c oxidase, subunit III
CLM73_22455	COG4772	TonB-dependent receptor
CLM73_22460	COG2900	Belongs to the SlyX family
CLM73_22465	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
CLM73_22480	COG0280	phosphate acetyltransferase
CLM73_22480	COG0281	malic enzyme
CLM73_22505	COG0697	spore germination
CLM73_22520	COG0583	DNA-binding transcription factor activity
CLM73_22555	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CLM73_22565	COG3145	DNA-N1-methyladenine dioxygenase activity
CLM73_22600	COG1028	Short-chain dehydrogenase reductase Sdr
CLM73_22605	COG1285	pathogenesis
CLM73_22610	COG1028	Short-chain dehydrogenase reductase Sdr
CLM73_22615	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CLM73_22640	COG2706	6-phosphogluconolactonase activity
CLM73_22650	COG3712	iron ion homeostasis
CLM73_22675	COG3712	iron ion homeostasis
CLM73_22690	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CLM73_22695	COG0330	HflC and HflK could
CLM73_22715	COG2807	transmembrane transport
CLM73_22725	COG2207	Transcriptional regulator
CLM73_22730	COG4106	trans-aconitate 2-methyltransferase activity
CLM73_22735	COG0861	Integral membrane protein TerC family
CLM73_22740	COG0583	DNA-binding transcription factor activity
CLM73_22785	COG0477	Major facilitator Superfamily
CLM73_22790	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
CLM73_22795	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
CLM73_22800	COG1845	cytochrome c oxidase, subunit III
CLM73_22805	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
CLM73_22820	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CLM73_22830	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CLM73_22860	COG0519	Catalyzes the synthesis of GMP from XMP
CLM73_22885	COG0667	Aldo Keto reductase
CLM73_22915	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CLM73_22955	COG0028	Belongs to the TPP enzyme family
CLM73_22960	COG1028	Short-chain dehydrogenase reductase Sdr
CLM73_22965	COG1028	Short-chain dehydrogenase reductase Sdr
CLM73_23020	COG1222	aaa ATPase
CLM73_23090	COG2814	Major facilitator Superfamily
CLM73_23135	COG4774	siderophore transport
CLM73_23160	COG1529	Aldehyde oxidase and xanthine dehydrogenase
CLM73_23165	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
CLM73_23170	COG2080	2 iron, 2 sulfur cluster binding
CLM73_23180	COG2205	protein histidine kinase activity
CLM73_23180	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CLM73_23190	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
CLM73_23200	COG0745	RESPONSE REGULATOR receiver
CLM73_23220	COG0025	NhaP-type Na H and K H
CLM73_23230	COG1609	Transcriptional regulator
CLM73_23240	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CLM73_23250	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CLM73_23260	COG5001	Diguanylate cyclase
CLM73_23260	COG2203	Gaf domain
CLM73_23260	COG3706	GGDEF domain
CLM73_23260	COG4251	negative regulation of phosphorylation
CLM73_23265	COG0840	transmembrane signaling receptor activity
CLM73_23270	COG0438	transferase activity, transferring glycosyl groups
CLM73_23325	COG3181	Tripartite tricarboxylate transporter family receptor
CLM73_23365	COG1053	succinate dehydrogenase
CLM73_23405	COG0583	DNA-binding transcription factor activity
CLM73_23410	COG3181	Tripartite tricarboxylate transporter family receptor
CLM73_23425	COG1595	DNA-templated transcription, initiation
CLM73_23445	COG0523	cobalamin synthesis protein
CLM73_23450	COG1469	GTP cyclohydrolase I activity
CLM73_23455	COG0257	Belongs to the bacterial ribosomal protein bL36 family
CLM73_23465	COG0798	PFAM Bile acid sodium symporter
CLM73_23490	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
CLM73_23550	COG0747	negative chemotaxis
CLM73_23555	COG0601	transmembrane transport
CLM73_23560	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CLM73_23570	COG4608	Belongs to the ABC transporter superfamily
CLM73_23590	COG0559	Belongs to the binding-protein-dependent transport system permease family
CLM73_23600	COG0411	ABC transporter
CLM73_23625	COG1454	alcohol dehydrogenase
CLM73_23645	COG2814	Major facilitator Superfamily
CLM73_23650	COG0730	response to heat
CLM73_23660	COG3181	Tripartite tricarboxylate transporter family receptor
CLM73_23705	COG2226	methyltransferase
CLM73_23710	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
CLM73_23715	COG0459	protein refolding
CLM73_23725	COG1846	Transcriptional regulator
CLM73_23745	COG1917	Cupin 2, conserved barrel domain protein
CLM73_23760	COG0559	Belongs to the binding-protein-dependent transport system permease family
CLM73_23770	COG1137	ATPase activity
CLM73_23775	COG0410	ABC transporter
CLM73_23780	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
CLM73_23785	COG0246	Mannitol dehydrogenase
CLM73_23790	COG2721	sulfolactate sulfo-lyase activity
CLM73_23795	COG0179	Fumarylacetoacetate (FAA) hydrolase
CLM73_23800	COG1028	Short-chain dehydrogenase reductase Sdr
CLM73_23805	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
CLM73_23815	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
CLM73_23820	COG2186	Transcriptional regulator
CLM73_23825	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
CLM73_23830	COG1252	NADH dehydrogenase
CLM73_23835	COG0284	orotidine-5'-phosphate decarboxylase activity
CLM73_23840	COG1546	Belongs to the CinA family
CLM73_23845	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
CLM73_23855	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CLM73_23860	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
CLM73_23885	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
CLM73_23890	COG3639	organic phosphonate transmembrane transporter activity
CLM73_23895	COG3639	organic phosphonate transmembrane transporter activity
CLM73_23920	COG0742	ribosomal rna small subunit methyltransferase
CLM73_23925	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
CLM73_23930	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
CLM73_23935	COG3135	benzoate transporter
CLM73_23950	COG0477	Major facilitator Superfamily
CLM73_23970	COG0012	GTP binding
CLM73_23980	COG0193	aminoacyl-tRNA hydrolase activity
CLM73_23985	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
CLM73_23990	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CLM73_24000	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
CLM73_24005	COG0840	transmembrane signaling receptor activity
CLM73_24010	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
CLM73_24020	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
CLM73_24030	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CLM73_24045	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
CLM73_24055	COG0204	Acyl-transferase
CLM73_24060	COG1368	sulfuric ester hydrolase activity
CLM73_24065	COG2186	Transcriptional regulator
CLM73_24070	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CLM73_24080	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
CLM73_24090	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
CLM73_24100	COG0642	Histidine kinase
CLM73_24105	COG0745	RESPONSE REGULATOR receiver
CLM73_24110	COG0277	FAD linked oxidase domain protein
CLM73_24120	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CLM73_24125	COG0166	Belongs to the GPI family
CLM73_24130	COG0438	transferase activity, transferring glycosyl groups
CLM73_24135	COG0438	transferase activity, transferring glycosyl groups
CLM73_24165	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
CLM73_24170	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CLM73_24175	COG2941	Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol
CLM73_24185	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
CLM73_24200	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CLM73_24220	COG0747	negative chemotaxis
CLM73_24225	COG0601	transmembrane transport
CLM73_24230	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CLM73_24235	COG4172	Belongs to the ABC transporter superfamily
CLM73_24240	COG0154	amidase activity
CLM73_24255	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
CLM73_24255	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
CLM73_24260	COG0509	glycine decarboxylation via glycine cleavage system
CLM73_24265	COG0404	The glycine cleavage system catalyzes the degradation of glycine
CLM73_24280	COG2081	HI0933 family
CLM73_24285	COG1982	Orn Lys Arg decarboxylase major
CLM73_24300	COG3706	GGDEF domain
CLM73_24310	COG0717	Belongs to the dCTP deaminase family
CLM73_24325	COG0489	protein tyrosine kinase activity
CLM73_24335	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CLM73_24335	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CLM73_24370	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
CLM73_24375	COG2200	EAL domain
CLM73_24390	COG0697	spore germination
CLM73_24400	COG3712	iron ion homeostasis
CLM73_24425	COG3976	FMN-binding domain protein
CLM73_24425	COG1053	succinate dehydrogenase
CLM73_24425	COG0431	NADPH-dependent FMN reductase
CLM73_24430	COG0583	DNA-binding transcription factor activity
CLM73_24435	COG0625	glutathione transferase activity
CLM73_24460	COG1024	Enoyl-CoA hydratase
CLM73_24470	COG1960	acyl-CoA dehydrogenase activity
CLM73_24475	COG3181	Tripartite tricarboxylate transporter family receptor
CLM73_24480	COG0583	DNA-binding transcription factor activity
CLM73_24485	COG3618	amidohydrolase
CLM73_24500	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CLM73_24520	COG0745	RESPONSE REGULATOR receiver
CLM73_24525	COG2205	protein histidine kinase activity
CLM73_24530	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
CLM73_24535	COG1764	response to oxidative stress
CLM73_24590	COG0410	ABC transporter
CLM73_24595	COG0411	ABC transporter
CLM73_24605	COG0559	Belongs to the binding-protein-dependent transport system permease family
CLM73_24625	COG1131	(ABC) transporter
CLM73_24630	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CLM73_24635	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
CLM73_24640	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
CLM73_24660	COG0583	DNA-binding transcription factor activity
CLM73_24675	COG2267	carboxylic ester hydrolase activity
CLM73_24680	COG3181	Tripartite tricarboxylate transporter family receptor
CLM73_24685	COG3284	Transcriptional regulator
CLM73_24740	COG0840	transmembrane signaling receptor activity
CLM73_24760	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CLM73_24770	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CLM73_24775	COG3181	Tripartite tricarboxylate transporter family receptor
CLM73_24780	COG2814	Major facilitator Superfamily
CLM73_24790	COG0165	Argininosuccinate lyase
CLM73_24850	COG3712	iron ion homeostasis
CLM73_24860	COG1028	Short-chain dehydrogenase reductase Sdr
CLM73_24865	COG3246	L-lysine catabolic process to acetate
CLM73_24885	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CLM73_24890	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CLM73_24895	COG0583	DNA-binding transcription factor activity
CLM73_24905	COG1024	Enoyl-CoA hydratase
CLM73_24915	COG1960	acyl-CoA dehydrogenase activity
CLM73_24920	COG1960	acyl-CoA dehydrogenase activity
CLM73_24930	COG1028	Short-chain dehydrogenase reductase Sdr
CLM73_24940	COG0154	amidase activity
CLM73_24945	COG3181	Tripartite tricarboxylate transporter family receptor
CLM73_24950	COG0583	DNA-binding transcription factor activity
CLM73_24955	COG2223	nitrite transmembrane transporter activity
CLM73_24965	COG1802	Transcriptional regulator
CLM73_24970	COG3181	Tripartite tricarboxylate transporter family receptor
CLM73_24975	COG3181	Tripartite tricarboxylate transporter family receptor
CLM73_24980	COG0473	3-isopropylmalate dehydrogenase activity
CLM73_24985	COG3618	amidohydrolase
CLM73_24990	COG0583	DNA-binding transcription factor activity
CLM73_25025	COG1132	(ABC) transporter
CLM73_25045	COG0583	DNA-binding transcription factor activity
CLM73_25070	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CLM73_25075	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CLM73_25085	COG0220	tRNA (guanine-N7-)-methyltransferase activity
CLM73_25100	COG1652	LysM domain
CLM73_25105	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
CLM73_25125	COG0625	glutathione transferase activity
CLM73_25130	COG5002	protein histidine kinase activity
CLM73_25135	COG3501	Rhs element vgr protein
CLM73_25185	COG1414	Transcriptional regulator
CLM73_25190	COG3734	2-keto-3-deoxy-galactonokinase
CLM73_25195	COG0800	Aldolase
CLM73_25200	COG4948	Mandelate Racemase Muconate Lactonizing
CLM73_25205	COG2271	Major facilitator Superfamily
CLM73_25210	COG3657	addiction module killer protein
CLM73_25220	COG4172	Belongs to the ABC transporter superfamily
CLM73_25225	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CLM73_25230	COG0601	transmembrane transport
CLM73_25235	COG0747	negative chemotaxis
CLM73_25255	COG2814	Major facilitator Superfamily
CLM73_25260	COG3550	peptidyl-serine autophosphorylation
CLM73_25265	COG1396	sequence-specific DNA binding
CLM73_25270	COG0326	Molecular chaperone. Has ATPase activity
CLM73_25275	COG2233	PERMEase
CLM73_25285	COG0745	RESPONSE REGULATOR receiver
CLM73_25405	COG0740	serine-type endopeptidase activity
CLM73_25515	COG2200	EAL domain
CLM73_25570	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
CLM73_25625	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
CLM73_25630	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
CLM73_25640	COG0583	DNA-binding transcription factor activity
CLM73_25655	COG0477	Major facilitator Superfamily
CLM73_25685	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CLM73_25690	COG3181	Tripartite tricarboxylate transporter family receptor
CLM73_25695	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CLM73_25725	COG4638	Rieske (2fe-2S)
CLM73_25735	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CLM73_25740	COG3246	L-lysine catabolic process to acetate
CLM73_25750	COG1028	Short-chain dehydrogenase reductase Sdr
CLM73_25815	COG0583	DNA-binding transcription factor activity
CLM73_25825	COG1695	Transcriptional regulator
CLM73_25840	COG0477	Major facilitator Superfamily
CLM73_25855	COG0628	permease
CLM73_25860	COG0583	DNA-binding transcription factor activity
CLM73_25865	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CLM73_25960	COG3501	Rhs element vgr protein
CLM73_26000	COG0625	glutathione transferase activity
CLM73_26005	COG0077	Prephenate dehydratase
CLM73_26005	COG1605	Chorismate mutase
CLM73_26015	COG2081	HI0933 family
CLM73_26020	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CLM73_26030	COG0559	Belongs to the binding-protein-dependent transport system permease family
CLM73_26040	COG1129	ABC transporter
CLM73_26045	COG0410	ABC transporter
CLM73_26060	COG2207	Transcriptional regulator
CLM73_26065	COG4774	siderophore transport
CLM73_26090	COG3181	Tripartite tricarboxylate transporter family receptor
CLM73_26105	COG1126	abc transporter atp-binding protein
CLM73_26110	COG0765	amino acid transport
CLM73_26115	COG4597	amino acid ABC transporter
CLM73_26120	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CLM73_26125	COG2884	Cell division ATP-binding protein ftsE
CLM73_26130	COG2177	Part of the ABC transporter FtsEX involved in
CLM73_26140	COG3712	iron ion homeostasis
CLM73_26150	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
CLM73_26160	COG4502	5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)
CLM73_26170	COG2186	Transcriptional regulator
CLM73_26185	COG0559	Belongs to the binding-protein-dependent transport system permease family
CLM73_26195	COG0411	ABC transporter
CLM73_26200	COG0410	ABC transporter
CLM73_26205	COG1028	Short-chain dehydrogenase reductase Sdr
CLM73_26210	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
CLM73_26220	COG0508	dehydrogenase complex catalyzes the overall conversion of
CLM73_26225	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CLM73_26230	COG0583	DNA-binding transcription factor activity
CLM73_26235	COG4773	Receptor
CLM73_26250	COG3550	peptidyl-serine autophosphorylation
CLM73_26260	COG0129	dihydroxy-acid dehydratase activity
CLM73_26285	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
CLM73_26290	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
CLM73_26295	COG1250	3-hydroxyacyl-CoA dehydrogenase
CLM73_26300	COG2031	fatty acid transporter
CLM73_26305	COG1028	Short-chain dehydrogenase reductase Sdr
CLM73_26310	COG1414	Transcriptional regulator
CLM73_26320	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
CLM73_26335	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
CLM73_26355	COG0288	reversible hydration of carbon dioxide
CLM73_26360	COG1802	Transcriptional regulator
CLM73_26365	COG1028	Short-chain dehydrogenase reductase Sdr
CLM73_26375	COG0559	Belongs to the binding-protein-dependent transport system permease family
CLM73_26395	COG1028	Short-chain dehydrogenase reductase Sdr
CLM73_26405	COG1053	succinate dehydrogenase
CLM73_26410	COG0625	glutathione transferase activity
CLM73_26415	COG2207	Transcriptional regulator
CLM73_26420	COG0300	oxidoreductase activity
CLM73_26435	COG0583	DNA-binding transcription factor activity
CLM73_26465	COG0318	PFAM AMP-dependent synthetase and ligase
CLM73_26480	COG3181	Tripartite tricarboxylate transporter family receptor
CLM73_26485	COG4948	Mandelate Racemase Muconate Lactonizing
CLM73_26500	COG1464	Belongs to the NlpA lipoprotein family
CLM73_26515	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
CLM73_26520	COG2890	protein-(glutamine-N5) methyltransferase activity
CLM73_26525	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
CLM73_26530	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
CLM73_26550	COG3264	Mechanosensitive ion channel
CLM73_26550	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
CLM73_26555	COG1522	sequence-specific DNA binding
CLM73_26565	COG5006	permease, DMT superfamily
CLM73_26580	COG3622	Belongs to the hyi family
CLM73_26605	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
CLM73_26610	COG1176	ABC-type spermidine putrescine transport system, permease component I
CLM73_26615	COG3842	ATPase activity
CLM73_26620	COG1178	ABC-type Fe3 transport system permease component
CLM73_26630	COG0477	Major facilitator Superfamily
CLM73_26640	COG2186	Transcriptional regulator
CLM73_26645	COG3395	kinase activity
CLM73_26650	COG2084	Dehydrogenase
CLM73_26655	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CLM73_26660	COG3622	Belongs to the hyi family
CLM73_26665	COG2271	Major facilitator Superfamily
CLM73_26670	COG0235	Class ii aldolase
CLM73_26690	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
CLM73_26695	COG0560	Phosphoserine phosphatase
CLM73_26700	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CLM73_26710	COG4774	siderophore transport
CLM73_26715	COG1595	DNA-templated transcription, initiation
CLM73_26725	COG3712	iron ion homeostasis
CLM73_26730	COG1595	DNA-templated transcription, initiation
CLM73_26760	COG0583	DNA-binding transcription factor activity
CLM73_26770	COG1960	acyl-CoA dehydrogenase activity
CLM73_26785	COG3866	Pectate lyase
CLM73_26790	COG4783	chaperone-mediated protein folding
CLM73_26790	COG1560	Kdo2-lipid A biosynthetic process
CLM73_26815	COG0438	transferase activity, transferring glycosyl groups
CLM73_26820	COG0457	Tetratricopeptide repeat
CLM73_26835	COG0142	geranyltranstransferase activity
CLM73_26845	COG1414	Transcriptional regulator
CLM73_26850	COG0261	This protein binds to 23S rRNA in the presence of protein L20
CLM73_26855	COG0211	Belongs to the bacterial ribosomal protein bL27 family
CLM73_26860	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
CLM73_26865	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
CLM73_26880	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CLM73_26885	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
CLM73_26890	COG3547	Transposase (IS116 IS110 IS902 family)
CLM73_26900	COG2186	Transcriptional regulator
CLM73_26915	COG0793	Belongs to the peptidase S41A family
CLM73_26920	COG4942	peptidase
CLM73_26925	COG0588	phosphoglycerate mutase activity
CLM73_26935	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
CLM73_26940	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
CLM73_26945	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
CLM73_26950	COG3181	Tripartite tricarboxylate transporter family receptor
CLM73_26955	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
CLM73_26960	COG1040	competence protein
CLM73_26965	COG2226	methyltransferase
CLM73_26970	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
CLM73_26980	COG0569	domain protein
CLM73_26985	COG2204	response regulator
CLM73_26990	COG5000	phosphorelay sensor kinase activity
CLM73_27005	COG1280	lysine exporter protein (LysE YggA)
CLM73_27035	COG0546	phosphoglycolate phosphatase activity
CLM73_27055	COG0242	peptide deformylase activity
CLM73_27060	COG0758	DNA mediated transformation
CLM73_27075	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CLM73_27080	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CLM73_27085	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
CLM73_27090	COG3181	Tripartite tricarboxylate transporter family receptor
CLM73_27095	COG0071	Belongs to the small heat shock protein (HSP20) family
CLM73_27110	COG1238	metal cluster binding
CLM73_27115	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
CLM73_27120	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CLM73_27135	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
CLM73_27140	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
CLM73_27145	COG4988	ABC transporter
CLM73_27155	COG1294	oxidase, subunit
CLM73_27160	COG1271	oxidase subunit
CLM73_27170	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
CLM73_27180	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
CLM73_27195	COG1137	ATPase activity
CLM73_27200	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
CLM73_27210	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
CLM73_27215	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CLM73_27230	COG1660	Displays ATPase and GTPase activities
CLM73_27235	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
CLM73_27240	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CLM73_27255	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
CLM73_27260	COG2823	Periplasmic or secreted lipoprotein
CLM73_27265	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CLM73_27270	COG1464	Belongs to the NlpA lipoprotein family
CLM73_27275	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
CLM73_27285	COG1309	transcriptional regulator
CLM73_27290	COG0471	metal ion transport
CLM73_27295	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
CLM73_27305	COG0772	Belongs to the SEDS family
CLM73_27310	COG0768	penicillin binding
CLM73_27320	COG1792	Involved in formation and maintenance of cell shape
CLM73_27325	COG1077	Cell shape determining protein MreB Mrl
CLM73_27330	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CLM73_27335	COG0154	amidase activity
CLM73_27340	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CLM73_27355	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
CLM73_27360	COG0708	Exodeoxyribonuclease III
CLM73_27365	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
CLM73_27375	COG0583	DNA-binding transcription factor activity
CLM73_27385	COG0583	DNA-binding transcription factor activity
CLM73_27400	COG0411	ABC transporter
CLM73_27410	COG3547	Transposase (IS116 IS110 IS902 family)
CLM73_27415	COG1764	response to oxidative stress
CLM73_27420	COG1846	Transcriptional regulator
CLM73_27475	COG0640	Transcriptional regulator
CLM73_27500	COG0297	glycogen (starch) synthase activity
CLM73_27505	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
CLM73_27510	COG3189	MarR family transcriptional regulator
CLM73_27515	COG0352	thiamine-phosphate diphosphorylase activity
CLM73_27515	COG0351	phosphomethylpyrimidine kinase
CLM73_27515	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
CLM73_27520	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
CLM73_27525	COG0513	Belongs to the DEAD box helicase family
CLM73_27535	COG0617	tRNA 3'-terminal CCA addition
CLM73_27545	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
CLM73_27550	COG2308	Evidence 4 Homologs of previously reported genes of
CLM73_27560	COG1305	Transglutaminase-like
CLM73_27570	COG1024	Enoyl-CoA hydratase
CLM73_27580	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CLM73_27600	COG0673	inositol 2-dehydrogenase activity
CLM73_27605	COG1609	Transcriptional regulator
CLM73_27630	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
CLM73_27635	COG1950	PFAM Membrane protein of
CLM73_27640	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
CLM73_27660	COG0066	3-isopropylmalate dehydratase activity
CLM73_27670	COG3181	Tripartite tricarboxylate transporter family receptor
CLM73_27675	COG0583	DNA-binding transcription factor activity
CLM73_27680	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CLM73_27715	COG0477	Major facilitator Superfamily
CLM73_27720	COG0154	amidase activity
CLM73_27725	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
CLM73_27735	COG1560	Kdo2-lipid A biosynthetic process
CLM73_27740	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
CLM73_27750	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
CLM73_27755	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
CLM73_27765	COG0803	Belongs to the bacterial solute-binding protein 9 family
CLM73_27780	COG0735	belongs to the Fur family
CLM73_27785	COG0523	cobalamin synthesis protein
CLM73_27790	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
CLM73_27795	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
CLM73_27800	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
CLM73_27810	COG2096	Adenosyltransferase
CLM73_27820	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
CLM73_27825	COG1609	Transcriptional regulator
CLM73_27835	COG0321	lipoyl(octanoyl) transferase activity
CLM73_27840	COG2921	Belongs to the UPF0250 family
CLM73_27850	COG1686	Belongs to the peptidase S11 family
CLM73_27875	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
CLM73_27885	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
CLM73_27900	COG0859	PFAM glycosyl transferase family 9
CLM73_27920	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CLM73_27930	COG1086	Polysaccharide biosynthesis protein
CLM73_27950	COG3274	enterobacterial common antigen metabolic process
CLM73_27955	COG0438	transferase activity, transferring glycosyl groups
CLM73_27960	COG0357	Ribosomal RNA small subunit methyltransferase G
CLM73_27975	COG0756	dUTP diphosphatase activity
CLM73_27980	COG2814	Major facilitator Superfamily
CLM73_27985	COG0697	spore germination
CLM73_28005	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CLM73_28010	COG3568	Endonuclease Exonuclease Phosphatase
CLM73_28015	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
CLM73_28040	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CLM73_28055	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CLM73_28060	COG1956	GAF domain-containing protein
CLM73_28065	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CLM73_28090	COG2186	Transcriptional regulator
CLM73_28095	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
CLM73_28130	COG4948	Mandelate Racemase Muconate Lactonizing
CLM73_28135	COG0583	DNA-binding transcription factor activity
CLM73_28140	COG0463	Glycosyl transferase, family 2
CLM73_28160	COG0629	single-stranded DNA binding
CLM73_28165	COG2814	Major facilitator Superfamily
CLM73_28180	COG0232	Belongs to the dGTPase family. Type 2 subfamily
CLM73_28185	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
CLM73_28190	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
CLM73_28200	COG1965	Belongs to the frataxin family
CLM73_28210	COG0019	diaminopimelate decarboxylase activity
CLM73_28215	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CLM73_28220	COG1333	cytochrome c biogenesis protein
CLM73_28230	COG0218	Necessary for normal cell division and for the maintenance of normal septation
CLM73_28245	COG4232	protein-disulfide reductase activity
CLM73_28250	COG1324	tolerance protein
CLM73_28260	COG0203	ribosomal protein L17
CLM73_28265	COG0202	RNA polymerase activity
CLM73_28270	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
CLM73_28275	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
CLM73_28280	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
CLM73_28285	COG0257	Belongs to the bacterial ribosomal protein bL36 family
CLM73_28290	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
CLM73_28295	COG0201	protein transport
CLM73_28300	COG0200	Binds to the 23S rRNA
CLM73_28305	COG1841	ribosomal large subunit assembly
CLM73_28310	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
CLM73_28315	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
CLM73_28320	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
CLM73_28325	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
CLM73_28330	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
CLM73_28335	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
CLM73_28340	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
CLM73_28345	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
CLM73_28360	COG2207	Transcriptional regulator
CLM73_28375	COG0411	ABC transporter
CLM73_28380	COG0410	ABC transporter
CLM73_28400	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
CLM73_28405	COG0255	Belongs to the universal ribosomal protein uL29 family
CLM73_28410	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
CLM73_28415	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
CLM73_28420	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
CLM73_28425	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
CLM73_28430	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
CLM73_28435	COG0089	rRNA binding
CLM73_28440	COG0088	Forms part of the polypeptide exit tunnel
CLM73_28445	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
CLM73_28450	COG0051	transcription antitermination factor activity, RNA binding
CLM73_28455	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
CLM73_28460	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
CLM73_28465	COG0049	tRNA binding
CLM73_28470	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
CLM73_28475	COG0745	RESPONSE REGULATOR receiver
CLM73_28505	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CLM73_28510	COG0085	RNA polymerase activity
CLM73_28515	COG0222	ribosome binding
CLM73_28520	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
CLM73_28525	COG0081	regulation of translation
CLM73_28530	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
CLM73_28550	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
CLM73_28575	COG1012	belongs to the aldehyde dehydrogenase family
CLM73_28605	COG0583	DNA-binding transcription factor activity
CLM73_28610	COG0252	asparaginase activity
CLM73_28615	COG1475	DNA binding
CLM73_28625	COG1192	Involved in chromosome partitioning
CLM73_28630	COG0357	Ribosomal RNA small subunit methyltransferase G
CLM73_28635	COG0445	tRNA wobble uridine modification
CLM73_28640	COG1278	Cold shock
CLM73_28645	COG3180	Ammonia monooxygenase
CLM73_28650	COG0436	Aminotransferase
CLM73_28670	COG3850	Histidine kinase
CLM73_28670	COG5002	protein histidine kinase activity
CLM73_28695	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
CLM73_28705	COG0601	transmembrane transport
CLM73_28710	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CLM73_28715	COG0444	Belongs to the ABC transporter superfamily
CLM73_28720	COG4608	Belongs to the ABC transporter superfamily
CLM73_28725	COG1473	amidohydrolase
CLM73_28730	COG2175	clavaminate synthase activity
CLM73_28740	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
CLM73_28745	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CLM73_28750	COG0753	catalase activity
CLM73_28755	COG0706	membrane insertase activity
CLM73_28760	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
CLM73_28765	COG0594	ribonuclease P activity
CLM73_28770	COG0230	Belongs to the bacterial ribosomal protein bL34 family