locus-tag class description LH59_00005 PF00308 Bacterial dnaA protein LH59_00005 PF11638 DnaA N-terminal domain LH59_00005 PF08299 Bacterial dnaA protein helix-turn-helix LH59_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain LH59_00010 PF02767 DNA polymerase III beta subunit, central domain LH59_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain LH59_00015 PF18053 DNA gyrase B subunit insert domain LH59_00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LH59_00015 PF01751 Toprim domain LH59_00015 PF00204 DNA gyrase B LH59_00015 PF00986 DNA gyrase B subunit, carboxyl terminus LH59_00020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_00020 PF03466 LysR substrate binding domain LH59_00030 PF07690 Major Facilitator Superfamily LH59_00035 PF17954 Quercetinase C-terminal cupin domain LH59_00035 PF02678 Pirin LH59_00045 PF07969 Amidohydrolase family LH59_00055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_00055 PF03466 LysR substrate binding domain LH59_00060 PF00497 Bacterial extracellular solute-binding proteins, family 3 LH59_00065 PF00528 Binding-protein-dependent transport system inner membrane component LH59_00070 PF00528 Binding-protein-dependent transport system inner membrane component LH59_00075 PF00005 ABC transporter LH59_00080 PF01212 Beta-eliminating lyase LH59_00085 PF00892 EamA-like transporter family LH59_00090 PF00708 Acylphosphatase LH59_00100 PF01070 FMN-dependent dehydrogenase LH59_00110 PF08402 TOBE domain LH59_00110 PF00005 ABC transporter LH59_00115 PF00528 Binding-protein-dependent transport system inner membrane component LH59_00120 PF00528 Binding-protein-dependent transport system inner membrane component LH59_00130 PF07992 Pyridine nucleotide-disulphide oxidoreductase LH59_00130 PF04324 BFD-like [2Fe-2S] binding domain LH59_00145 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LH59_00155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_00155 PF03466 LysR substrate binding domain LH59_00160 PF03401 Tripartite tricarboxylate transporter family receptor LH59_00165 PF01968 Hydantoinase/oxoprolinase LH59_00165 PF05378 Hydantoinase/oxoprolinase N-terminal region LH59_00175 PF00392 Bacterial regulatory proteins, gntR family LH59_00185 PF00005 ABC transporter LH59_00185 PF08402 TOBE domain LH59_00190 PF00528 Binding-protein-dependent transport system inner membrane component LH59_00195 PF00528 Binding-protein-dependent transport system inner membrane component LH59_00200 PF01266 FAD dependent oxidoreductase LH59_00210 PF04324 BFD-like [2Fe-2S] binding domain LH59_00210 PF07992 Pyridine nucleotide-disulphide oxidoreductase LH59_00220 PF01042 Endoribonuclease L-PSP LH59_00225 PF07969 Amidohydrolase family LH59_00245 PF02608 ABC transporter substrate-binding protein PnrA-like LH59_00255 PF02558 Ketopantoate reductase PanE/ApbA LH59_00255 PF08546 Ketopantoate reductase PanE/ApbA C terminal LH59_00270 PF01613 Flavin reductase like domain LH59_00280 PF00440 Bacterial regulatory proteins, tetR family LH59_00285 PF07690 Major Facilitator Superfamily LH59_00290 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LH59_00300 PF01062 Bestrophin, RFP-TM, chloride channel LH59_00305 PF01037 Lrp/AsnC ligand binding domain LH59_00310 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LH59_00310 PF00205 Thiamine pyrophosphate enzyme, central domain LH59_00310 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LH59_00320 PF00528 Binding-protein-dependent transport system inner membrane component LH59_00325 PF00005 ABC transporter LH59_00335 PF01751 Toprim domain LH59_00335 PF01131 DNA topoisomerase LH59_00345 PF00749 tRNA synthetases class I (E and Q), catalytic domain LH59_00350 PF04361 Protein of unknown function (DUF494) LH59_00360 PF16868 NMT1-like family LH59_00365 PF01168 Alanine racemase, N-terminal domain LH59_00365 PF14031 Putative serine dehydratase domain LH59_00375 PF00005 ABC transporter LH59_00380 PF00528 Binding-protein-dependent transport system inner membrane component LH59_00385 PF00528 Binding-protein-dependent transport system inner membrane component LH59_00390 PF00497 Bacterial extracellular solute-binding proteins, family 3 LH59_00395 PF07411 Domain of unknown function (DUF1508) LH59_00400 PF03401 Tripartite tricarboxylate transporter family receptor LH59_00405 PF00202 Aminotransferase class-III LH59_00415 PF12833 Helix-turn-helix domain LH59_00415 PF01965 DJ-1/PfpI family LH59_00420 PF12823 Domain of unknown function (DUF3817) LH59_00430 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system LH59_00440 PF06803 Protein of unknown function (DUF1232) LH59_00450 PF01810 LysE type translocator LH59_00470 PF00392 Bacterial regulatory proteins, gntR family LH59_00470 PF07729 FCD domain LH59_00475 PF07690 Major Facilitator Superfamily LH59_00480 PF07715 TonB-dependent Receptor Plug Domain LH59_00480 PF07660 Secretin and TonB N terminus short domain LH59_00480 PF00593 TonB dependent receptor LH59_00490 PF04542 Sigma-70 region 2 LH59_00490 PF08281 Sigma-70, region 4 LH59_00495 PF00501 AMP-binding enzyme LH59_00495 PF13193 AMP-binding enzyme C-terminal domain LH59_00505 PF02770 Acyl-CoA dehydrogenase, middle domain LH59_00505 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LH59_00505 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LH59_00520 PF03401 Tripartite tricarboxylate transporter family receptor LH59_00555 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LH59_00555 PF00289 Biotin carboxylase, N-terminal domain LH59_00555 PF00364 Biotin-requiring enzyme LH59_00555 PF02785 Biotin carboxylase C-terminal domain LH59_00560 PF01039 Carboxyl transferase domain LH59_00565 PF00108 Thiolase, N-terminal domain LH59_00565 PF02803 Thiolase, C-terminal domain LH59_00570 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) LH59_00575 PF02770 Acyl-CoA dehydrogenase, middle domain LH59_00575 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LH59_00575 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LH59_00580 PF07687 Peptidase dimerisation domain LH59_00580 PF01546 Peptidase family M20/M25/M40 LH59_00585 PF03401 Tripartite tricarboxylate transporter family receptor LH59_00590 PF02694 Uncharacterised BCR, YnfA/UPF0060 family LH59_00595 PF00376 MerR family regulatory protein LH59_00595 PF09278 MerR, DNA binding LH59_00605 PF01810 LysE type translocator LH59_00615 PF01053 Cys/Met metabolism PLP-dependent enzyme LH59_00620 PF00561 alpha/beta hydrolase fold LH59_00630 PF00085 Thioredoxin LH59_00630 PF01323 DSBA-like thioredoxin domain LH59_00640 PF05746 DALR anticodon binding domain LH59_00640 PF00750 tRNA synthetases class I (R) LH59_00640 PF03485 Arginyl tRNA synthetase N terminal domain LH59_00655 PF00528 Binding-protein-dependent transport system inner membrane component LH59_00660 PF00528 Binding-protein-dependent transport system inner membrane component LH59_00665 PF13416 Bacterial extracellular solute-binding protein LH59_00670 PF00005 ABC transporter LH59_00670 PF17912 MalK OB fold domain LH59_00675 PF00149 Calcineurin-like phosphoesterase LH59_00680 PF00356 Bacterial regulatory proteins, lacI family LH59_00685 PF01425 Amidase LH59_00690 PF08502 LeuA allosteric (dimerisation) domain LH59_00690 PF00682 HMGL-like LH59_00695 PF03401 Tripartite tricarboxylate transporter family receptor LH59_00705 PF00309 Sigma-54 factor, Activator interacting domain (AID) LH59_00705 PF04963 Sigma-54 factor, core binding domain LH59_00705 PF04552 Sigma-54, DNA binding domain LH59_00725 PF03466 LysR substrate binding domain LH59_00725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_00735 PF00210 Ferritin-like domain LH59_00750 PF03144 Elongation factor Tu domain 2 LH59_00750 PF16658 Class II release factor RF3, C-terminal domain LH59_00750 PF00009 Elongation factor Tu GTP binding domain LH59_00755 PF01810 LysE type translocator LH59_00765 PF00271 Helicase conserved C-terminal domain LH59_00765 PF00270 DEAD/DEAH box helicase LH59_00770 PF06097 Bacterial protein of unknown function (DUF945) LH59_00775 PF06097 Bacterial protein of unknown function (DUF945) LH59_00780 PF01979 Amidohydrolase family LH59_00785 PF00005 ABC transporter LH59_00785 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LH59_00790 PF00528 Binding-protein-dependent transport system inner membrane component LH59_00790 PF12911 N-terminal TM domain of oligopeptide transport permease C LH59_00800 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LH59_00805 PF00009 Elongation factor Tu GTP binding domain LH59_00805 PF04760 Translation initiation factor IF-2, N-terminal region LH59_00805 PF08364 Bacterial translation initiation factor IF-2 associated region LH59_00805 PF11987 Translation-initiation factor 2 LH59_00810 PF11067 Protein of unknown function (DUF2868) LH59_00815 PF12833 Helix-turn-helix domain LH59_00815 PF06445 GyrI-like small molecule binding domain LH59_00825 PF00266 Aminotransferase class-V LH59_00835 PF03466 LysR substrate binding domain LH59_00835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_00850 PF02447 GntP family permease LH59_00865 PF04386 Stringent starvation protein B LH59_00870 PF02798 Glutathione S-transferase, N-terminal domain LH59_00870 PF00043 Glutathione S-transferase, C-terminal domain LH59_00875 PF02167 Cytochrome C1 family LH59_00880 PF00033 Cytochrome b/b6/petB LH59_00880 PF00032 Cytochrome b(C-terminal)/b6/petD LH59_00885 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal LH59_00885 PF00355 Rieske [2Fe-2S] domain LH59_00890 PF01741 Large-conductance mechanosensitive channel, MscL LH59_00895 PF01784 NIF3 (NGG1p interacting factor 3) LH59_00900 PF00595 PDZ domain LH59_00910 PF00902 Sec-independent protein translocase protein (TatC) LH59_00915 PF02416 mttA/Hcf106 family LH59_00920 PF02416 mttA/Hcf106 family LH59_00925 PF01230 HIT domain LH59_00930 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LH59_00935 PF01502 Phosphoribosyl-AMP cyclohydrolase LH59_00940 PF00977 Histidine biosynthesis protein LH59_00945 PF00977 Histidine biosynthesis protein LH59_00950 PF00117 Glutamine amidotransferase class-I LH59_00955 PF00475 Imidazoleglycerol-phosphate dehydratase LH59_00960 PF00155 Aminotransferase class I and II LH59_00965 PF00815 Histidinol dehydrogenase LH59_00970 PF01634 ATP phosphoribosyltransferase LH59_00975 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LH59_00985 PF01061 ABC-2 type transporter LH59_00990 PF00005 ABC transporter LH59_01000 PF04333 MlaA lipoprotein LH59_01005 PF02470 MlaD protein LH59_01010 PF02405 Permease MlaE LH59_01015 PF00005 ABC transporter LH59_01020 PF03060 Nitronate monooxygenase LH59_01025 PF03401 Tripartite tricarboxylate transporter family receptor LH59_01030 PF06779 Uncharacterised MFS-type transporter YbfB LH59_01035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_01035 PF03466 LysR substrate binding domain LH59_01040 PF03922 OmpW family LH59_01045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_01045 PF03466 LysR substrate binding domain LH59_01050 PF03746 LamB/YcsF family LH59_01055 PF00364 Biotin-requiring enzyme LH59_01060 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LH59_01060 PF02785 Biotin carboxylase C-terminal domain LH59_01060 PF00289 Biotin carboxylase, N-terminal domain LH59_01070 PF02626 Carboxyltransferase domain, subdomain A and B LH59_01080 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LH59_01080 PF07992 Pyridine nucleotide-disulphide oxidoreductase LH59_01085 PF04898 Glutamate synthase central domain LH59_01085 PF01645 Conserved region in glutamate synthase LH59_01085 PF00310 Glutamine amidotransferases class-II LH59_01085 PF01493 GXGXG motif LH59_01095 PF00756 Putative esterase LH59_01105 PF04545 Sigma-70, region 4 LH59_01105 PF00140 Sigma-70 factor, region 1.2 LH59_01105 PF04542 Sigma-70 region 2 LH59_01110 PF00149 Calcineurin-like phosphoesterase LH59_01115 PF00999 Sodium/hydrogen exchanger family LH59_01125 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LH59_01125 PF02790 Cytochrome C oxidase subunit II, transmembrane domain LH59_01130 PF00115 Cytochrome C and Quinol oxidase polypeptide I LH59_01145 PF00510 Cytochrome c oxidase subunit III LH59_01165 PF02628 Cytochrome oxidase assembly protein LH59_01170 PF01040 UbiA prenyltransferase family LH59_01175 PF02630 SCO1/SenC LH59_01195 PF00132 Bacterial transferase hexapeptide (six repeats) LH59_01195 PF14602 Hexapeptide repeat of succinyl-transferase LH59_01195 PF12804 MobA-like NTP transferase domain LH59_01200 PF07690 Major Facilitator Superfamily LH59_01205 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LH59_01205 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LH59_01205 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LH59_01210 PF13439 Glycosyltransferase Family 4 LH59_01210 PF00534 Glycosyl transferases group 1 LH59_01220 PF01380 SIS domain LH59_01225 PF08240 Alcohol dehydrogenase GroES-like domain LH59_01225 PF00107 Zinc-binding dehydrogenase LH59_01235 PF02082 Transcriptional regulator LH59_01240 PF07690 Major Facilitator Superfamily LH59_01245 PF14525 AraC-binding-like domain LH59_01245 PF12833 Helix-turn-helix domain LH59_01250 PF07715 TonB-dependent Receptor Plug Domain LH59_01250 PF00593 TonB dependent receptor LH59_01255 PF01497 Periplasmic binding protein LH59_01260 PF01032 FecCD transport family LH59_01265 PF01032 FecCD transport family LH59_01270 PF00005 ABC transporter LH59_01290 PF17284 Spermidine synthase tetramerisation domain LH59_01300 PF03783 Curli production assembly/transport component CsgG LH59_01310 PF05643 Putative bacterial lipoprotein (DUF799) LH59_01315 PF02910 Fumarate reductase flavoprotein C-term LH59_01315 PF00890 FAD binding domain LH59_01320 PF02445 Quinolinate synthetase A protein LH59_01325 PF07690 Major Facilitator Superfamily LH59_01330 PF03466 LysR substrate binding domain LH59_01330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_01335 PF00795 Carbon-nitrogen hydrolase LH59_01340 PF02423 Ornithine cyclodeaminase/mu-crystallin family LH59_01345 PF01926 50S ribosome-binding GTPase LH59_01350 PF02548 Ketopantoate hydroxymethyltransferase LH59_01355 PF03466 LysR substrate binding domain LH59_01355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_01360 PF00474 Sodium:solute symporter family LH59_01365 PF00491 Arginase family LH59_01370 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase LH59_01375 PF00535 Glycosyl transferase family 2 LH59_01380 PF00873 AcrB/AcrD/AcrF family LH59_01385 PF00529 HlyD membrane-fusion protein of T1SS LH59_01385 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LH59_01390 PF02321 Outer membrane efflux protein LH59_01400 PF00072 Response regulator receiver domain LH59_01400 PF00486 Transcriptional regulatory protein, C terminal LH59_01405 PF00672 HAMP domain LH59_01405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LH59_01405 PF00512 His Kinase A (phospho-acceptor) domain LH59_01425 PF02872 5'-nucleotidase, C-terminal domain LH59_01425 PF00149 Calcineurin-like phosphoesterase LH59_01430 PF00107 Zinc-binding dehydrogenase LH59_01430 PF08240 Alcohol dehydrogenase GroES-like domain LH59_01435 PF02583 Metal-sensitive transcriptional repressor LH59_01440 PF00392 Bacterial regulatory proteins, gntR family LH59_01440 PF07702 UTRA domain LH59_01445 PF05962 HutD LH59_01450 PF01175 Urocanase Rossmann-like domain LH59_01450 PF17392 Urocanase C-terminal domain LH59_01450 PF17391 Urocanase N-terminal domain LH59_01455 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LH59_01460 PF00221 Aromatic amino acid lyase LH59_01465 PF01979 Amidohydrolase family LH59_01470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LH59_01470 PF00672 HAMP domain LH59_01470 PF02203 Tar ligand binding domain homologue LH59_01475 PF07690 Major Facilitator Superfamily LH59_01490 PF13953 PapC C-terminal domain LH59_01490 PF00577 Outer membrane usher protein LH59_01490 PF13954 PapC N-terminal domain LH59_01550 PF00392 Bacterial regulatory proteins, gntR family LH59_01550 PF07729 FCD domain LH59_01565 PF00171 Aldehyde dehydrogenase family LH59_01575 PF00175 Oxidoreductase NAD-binding domain LH59_01575 PF00111 2Fe-2S iron-sulfur cluster binding domain LH59_01575 PF00970 Oxidoreductase FAD-binding domain LH59_01580 PF00582 Universal stress protein family LH59_01585 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LH59_01585 PF00005 ABC transporter LH59_01590 PF00528 Binding-protein-dependent transport system inner membrane component LH59_01590 PF12911 N-terminal TM domain of oligopeptide transport permease C LH59_01595 PF00528 Binding-protein-dependent transport system inner membrane component LH59_01600 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LH59_01610 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LH59_01610 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LH59_01615 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LH59_01615 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LH59_01625 PF03180 NLPA lipoprotein LH59_01630 PF03358 NADPH-dependent FMN reductase LH59_01635 PF09084 NMT1/THI5 like LH59_01640 PF00296 Luciferase-like monooxygenase LH59_01645 PF00528 Binding-protein-dependent transport system inner membrane component LH59_01650 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LH59_01650 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LH59_01655 PF00005 ABC transporter LH59_01655 PF09383 NIL domain LH59_01660 PF00528 Binding-protein-dependent transport system inner membrane component LH59_01665 PF03180 NLPA lipoprotein LH59_01670 PF00005 ABC transporter LH59_01675 PF03459 TOBE domain LH59_01680 PF11737 Protein of unknown function (DUF3300) LH59_01705 PF03061 Thioesterase superfamily LH59_01715 PF00384 Molybdopterin oxidoreductase LH59_01715 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LH59_01715 PF01568 Molydopterin dinucleotide binding domain LH59_01720 PF00384 Molybdopterin oxidoreductase LH59_01720 PF01568 Molydopterin dinucleotide binding domain LH59_01720 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LH59_01725 PF13247 4Fe-4S dicluster domain LH59_01725 PF09163 Formate dehydrogenase N, transmembrane LH59_01725 PF12800 4Fe-4S binding domain LH59_01730 PF01292 Prokaryotic cytochrome b561 LH59_01735 PF04216 Protein involved in formate dehydrogenase formation LH59_01740 PF12390 Selenocysteine synthase N terminal LH59_01740 PF03841 L-seryl-tRNA selenium transferase LH59_01745 PF03144 Elongation factor Tu domain 2 LH59_01745 PF09107 Elongation factor SelB, winged helix LH59_01745 PF09106 Elongation factor SelB, winged helix LH59_01745 PF00009 Elongation factor Tu GTP binding domain LH59_01755 PF00535 Glycosyl transferase family 2 LH59_01760 PF00578 AhpC/TSA family LH59_01765 PF01841 Transglutaminase-like superfamily LH59_01770 PF00586 AIR synthase related protein, N-terminal domain LH59_01770 PF02769 AIR synthase related protein, C-terminal domain LH59_01780 PF03466 LysR substrate binding domain LH59_01780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_01790 PF01323 DSBA-like thioredoxin domain LH59_01805 PF00171 Aldehyde dehydrogenase family LH59_01810 PF01590 GAF domain LH59_01810 PF00158 Sigma-54 interaction domain LH59_01810 PF02954 Bacterial regulatory protein, Fis family LH59_01815 PF00218 Indole-3-glycerol phosphate synthase LH59_01820 PF02885 Glycosyl transferase family, helical bundle domain LH59_01820 PF00591 Glycosyl transferase family, a/b domain LH59_01825 PF00117 Glutamine amidotransferase class-I LH59_01830 PF00425 chorismate binding enzyme LH59_01830 PF04715 Anthranilate synthase component I, N terminal region LH59_01835 PF13419 Haloacid dehalogenase-like hydrolase LH59_01845 PF04379 ApaG domain LH59_01855 PF01494 FAD binding domain LH59_01860 PF13098 Thioredoxin-like domain LH59_01860 PF10411 Disulfide bond isomerase protein N-terminus LH59_01865 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LH59_01865 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LH59_01865 PF01842 ACT domain LH59_01870 PF01171 PP-loop family LH59_01880 PF07992 Pyridine nucleotide-disulphide oxidoreductase LH59_01885 PF12146 Serine aminopeptidase, S33 LH59_01890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_01890 PF03466 LysR substrate binding domain LH59_01895 PF13458 Periplasmic binding protein LH59_01900 PF02653 Branched-chain amino acid transport system / permease component LH59_01905 PF02653 Branched-chain amino acid transport system / permease component LH59_01910 PF00005 ABC transporter LH59_01910 PF12399 Branched-chain amino acid ATP-binding cassette transporter LH59_01915 PF00005 ABC transporter LH59_01920 PF00795 Carbon-nitrogen hydrolase LH59_01925 PF07728 AAA domain (dynein-related subfamily) LH59_01925 PF08406 CbbQ/NirQ/NorQ C-terminal LH59_01945 PF17645 Arylmalonate decarboxylase LH59_01950 PF03466 LysR substrate binding domain LH59_01950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_01955 PF03401 Tripartite tricarboxylate transporter family receptor LH59_01960 PF01144 Coenzyme A transferase LH59_01965 PF01144 Coenzyme A transferase LH59_01970 PF03401 Tripartite tricarboxylate transporter family receptor LH59_01975 PF13180 PDZ domain LH59_01980 PF00378 Enoyl-CoA hydratase/isomerase LH59_01995 PF00119 ATP synthase A chain LH59_02000 PF00137 ATP synthase subunit C LH59_02005 PF00430 ATP synthase B/B' CF(0) LH59_02010 PF00213 ATP synthase delta (OSCP) subunit LH59_02015 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LH59_02015 PF00306 ATP synthase alpha/beta chain, C terminal domain LH59_02015 PF02874 ATP synthase alpha/beta family, beta-barrel domain LH59_02020 PF00231 ATP synthase LH59_02025 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LH59_02025 PF02874 ATP synthase alpha/beta family, beta-barrel domain LH59_02030 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LH59_02040 PF01208 Uroporphyrinogen decarboxylase (URO-D) LH59_02045 PF18074 Primosomal protein N C-terminal domain LH59_02045 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LH59_02045 PF00271 Helicase conserved C-terminal domain LH59_02045 PF17764 3′ DNA-binding domain (3′BD) LH59_02045 PF00270 DEAD/DEAH box helicase LH59_02050 PF13361 UvrD-like helicase C-terminal domain LH59_02050 PF00580 UvrD/REP helicase N-terminal domain LH59_02055 PF12852 Cupin LH59_02055 PF12833 Helix-turn-helix domain LH59_02060 PF01212 Beta-eliminating lyase LH59_02065 PF01380 SIS domain LH59_02075 PF01965 DJ-1/PfpI family LH59_02075 PF12833 Helix-turn-helix domain LH59_02080 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle LH59_02080 PF14602 Hexapeptide repeat of succinyl-transferase LH59_02085 PF03976 Polyphosphate kinase 2 (PPK2) LH59_02090 PF07687 Peptidase dimerisation domain LH59_02090 PF01546 Peptidase family M20/M25/M40 LH59_02100 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LH59_02100 PF00005 ABC transporter LH59_02105 PF00005 ABC transporter LH59_02105 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LH59_02110 PF12911 N-terminal TM domain of oligopeptide transport permease C LH59_02110 PF00528 Binding-protein-dependent transport system inner membrane component LH59_02115 PF00528 Binding-protein-dependent transport system inner membrane component LH59_02120 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LH59_02125 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family LH59_02140 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LH59_02150 PF01256 Carbohydrate kinase LH59_02155 PF00378 Enoyl-CoA hydratase/isomerase LH59_02160 PF00378 Enoyl-CoA hydratase/isomerase LH59_02165 PF03060 Nitronate monooxygenase LH59_02170 PF00440 Bacterial regulatory proteins, tetR family LH59_02180 PF02515 CoA-transferase family III LH59_02185 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain LH59_02185 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LH59_02185 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LH59_02200 PF07690 Major Facilitator Superfamily LH59_02210 PF05368 NmrA-like family LH59_02215 PF02566 OsmC-like protein LH59_02220 PF03466 LysR substrate binding domain LH59_02220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_02230 PF04542 Sigma-70 region 2 LH59_02230 PF12680 SnoaL-like domain LH59_02230 PF08281 Sigma-70, region 4 LH59_02235 PF16123 Hydroxyacylglutathione hydrolase C-terminus LH59_02235 PF00753 Metallo-beta-lactamase superfamily LH59_02250 PF07883 Cupin domain LH59_02255 PF01557 Fumarylacetoacetate (FAA) hydrolase family LH59_02265 PF02653 Branched-chain amino acid transport system / permease component LH59_02270 PF11862 Domain of unknown function (DUF3382) LH59_02270 PF02653 Branched-chain amino acid transport system / permease component LH59_02275 PF00005 ABC transporter LH59_02280 PF00005 ABC transporter LH59_02285 PF00795 Carbon-nitrogen hydrolase LH59_02290 PF07729 FCD domain LH59_02290 PF00392 Bacterial regulatory proteins, gntR family LH59_02300 PF03466 LysR substrate binding domain LH59_02300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_02305 PF03401 Tripartite tricarboxylate transporter family receptor LH59_02310 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family LH59_02320 PF04262 Glutamate-cysteine ligase LH59_02325 PF00561 alpha/beta hydrolase fold LH59_02350 PF02615 Malate/L-lactate dehydrogenase LH59_02355 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LH59_02355 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LH59_02360 PF03401 Tripartite tricarboxylate transporter family receptor LH59_02365 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus LH59_02370 PF08666 SAF domain LH59_02375 PF07702 UTRA domain LH59_02375 PF00392 Bacterial regulatory proteins, gntR family LH59_02380 PF00561 alpha/beta hydrolase fold LH59_02385 PF07021 Methionine biosynthesis protein MetW LH59_02385 PF00561 alpha/beta hydrolase fold LH59_02390 PF07690 Major Facilitator Superfamily LH59_02400 PF03458 UPF0126 domain LH59_02405 PF00392 Bacterial regulatory proteins, gntR family LH59_02405 PF07729 FCD domain LH59_02410 PF03746 LamB/YcsF family LH59_02415 PF02626 Carboxyltransferase domain, subdomain A and B LH59_02420 PF02682 Carboxyltransferase domain, subdomain C and D LH59_02430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_02430 PF03466 LysR substrate binding domain LH59_02440 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LH59_02440 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LH59_02450 PF05275 Copper resistance protein B precursor (CopB) LH59_02455 PF00394 Multicopper oxidase LH59_02455 PF07731 Multicopper oxidase LH59_02455 PF07732 Multicopper oxidase LH59_02465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LH59_02465 PF00512 His Kinase A (phospho-acceptor) domain LH59_02465 PF00672 HAMP domain LH59_02470 PF00486 Transcriptional regulatory protein, C terminal LH59_02470 PF00072 Response regulator receiver domain LH59_02475 PF00512 His Kinase A (phospho-acceptor) domain LH59_02475 PF11808 Phosphate regulon sensor protein PhoR LH59_02475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LH59_02475 PF00989 PAS fold LH59_02480 PF00486 Transcriptional regulatory protein, C terminal LH59_02480 PF00072 Response regulator receiver domain LH59_02485 PF01209 ubiE/COQ5 methyltransferase family LH59_02500 PF03109 ABC1 family LH59_02510 PF01467 Cytidylyltransferase-like LH59_02515 PF02321 Outer membrane efflux protein LH59_02525 PF08543 Phosphomethylpyrimidine kinase LH59_02530 PF05690 Thiazole biosynthesis protein ThiG LH59_02535 PF01497 Periplasmic binding protein LH59_02540 PF07715 TonB-dependent Receptor Plug Domain LH59_02540 PF00593 TonB dependent receptor LH59_02545 PF00809 Pterin binding enzyme LH59_02545 PF02310 B12 binding domain LH59_02545 PF02574 Homocysteine S-methyltransferase LH59_02545 PF02607 B12 binding domain LH59_02545 PF02965 Vitamin B12 dependent methionine synthase, activation domain LH59_02550 PF07729 FCD domain LH59_02550 PF00392 Bacterial regulatory proteins, gntR family LH59_02565 PF00107 Zinc-binding dehydrogenase LH59_02565 PF08240 Alcohol dehydrogenase GroES-like domain LH59_02570 PF00528 Binding-protein-dependent transport system inner membrane component LH59_02575 PF00528 Binding-protein-dependent transport system inner membrane component LH59_02580 PF00005 ABC transporter LH59_02585 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LH59_02585 PF13378 Enolase C-terminal domain-like LH59_02590 PF08125 Mannitol dehydrogenase C-terminal domain LH59_02590 PF01232 Mannitol dehydrogenase Rossmann domain LH59_02595 PF01425 Amidase LH59_02620 PF01965 DJ-1/PfpI family LH59_02620 PF12833 Helix-turn-helix domain LH59_02625 PF03975 CheD chemotactic sensory transduction LH59_02630 PF18075 FtsX extracellular domain LH59_02635 PF00005 ABC transporter LH59_02640 PF00497 Bacterial extracellular solute-binding proteins, family 3 LH59_02645 PF00528 Binding-protein-dependent transport system inner membrane component LH59_02650 PF00528 Binding-protein-dependent transport system inner membrane component LH59_02655 PF00005 ABC transporter LH59_02660 PF03401 Tripartite tricarboxylate transporter family receptor LH59_02675 PF00005 ABC transporter LH59_02680 PF00005 ABC transporter LH59_02685 PF11862 Domain of unknown function (DUF3382) LH59_02685 PF02653 Branched-chain amino acid transport system / permease component LH59_02690 PF02653 Branched-chain amino acid transport system / permease component LH59_02700 PF01494 FAD binding domain LH59_02710 PF03401 Tripartite tricarboxylate transporter family receptor LH59_02715 PF00800 Prephenate dehydratase LH59_02715 PF01842 ACT domain LH59_02715 PF01817 Chorismate mutase type II LH59_02720 PF13417 Glutathione S-transferase, N-terminal domain LH59_02725 PF01557 Fumarylacetoacetate (FAA) hydrolase family LH59_02730 PF07883 Cupin domain LH59_02735 PF03466 LysR substrate binding domain LH59_02735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_02745 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LH59_02745 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LH59_02750 PF07690 Major Facilitator Superfamily LH59_02760 PF02616 Segregation and condensation protein ScpA LH59_02765 PF02569 Pantoate-beta-alanine ligase LH59_02770 PF00072 Response regulator receiver domain LH59_02770 PF00196 Bacterial regulatory proteins, luxR family LH59_02780 PF01478 Type IV leader peptidase family LH59_02780 PF06750 Bacterial Peptidase A24 N-terminal domain LH59_02785 PF01121 Dephospho-CoA kinase LH59_02790 PF07072 Cell division protein LH59_02795 PF13533 Biotin-lipoyl like LH59_02800 PF00873 AcrB/AcrD/AcrF family LH59_02805 PF00873 AcrB/AcrD/AcrF family LH59_02815 PF03401 Tripartite tricarboxylate transporter family receptor LH59_02820 PF01266 FAD dependent oxidoreductase LH59_02825 PF07969 Amidohydrolase family LH59_02840 PF00528 Binding-protein-dependent transport system inner membrane component LH59_02845 PF00528 Binding-protein-dependent transport system inner membrane component LH59_02850 PF00005 ABC transporter LH59_02850 PF17912 MalK OB fold domain LH59_02860 PF00293 NUDIX domain LH59_02870 PF01960 ArgJ family LH59_02890 PF02653 Branched-chain amino acid transport system / permease component LH59_02895 PF11862 Domain of unknown function (DUF3382) LH59_02895 PF02653 Branched-chain amino acid transport system / permease component LH59_02900 PF00005 ABC transporter LH59_02900 PF12399 Branched-chain amino acid ATP-binding cassette transporter LH59_02905 PF00005 ABC transporter LH59_02920 PF09345 Domain of unknown function (DUF1987) LH59_02925 PF00990 Diguanylate cyclase, GGDEF domain LH59_02925 PF08448 PAS fold LH59_02930 PF03707 Bacterial signalling protein N terminal repeat LH59_02930 PF00990 Diguanylate cyclase, GGDEF domain LH59_02930 PF00563 EAL domain LH59_02935 PF01494 FAD binding domain LH59_02945 PF00378 Enoyl-CoA hydratase/isomerase LH59_02950 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LH59_02950 PF02770 Acyl-CoA dehydrogenase, middle domain LH59_02950 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LH59_02955 PF13193 AMP-binding enzyme C-terminal domain LH59_02955 PF00501 AMP-binding enzyme LH59_02980 PF01738 Dienelactone hydrolase family LH59_02985 PF00355 Rieske [2Fe-2S] domain LH59_02985 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LH59_02990 PF00866 Ring hydroxylating beta subunit LH59_02995 PF00857 Isochorismatase family LH59_03010 PF01464 Transglycosylase SLT domain LH59_03015 PF00202 Aminotransferase class-III LH59_03020 PF02581 Thiamine monophosphate synthase LH59_03025 PF08543 Phosphomethylpyrimidine kinase LH59_03030 PF00301 Rubredoxin LH59_03035 PF02622 Uncharacterized ACR, COG1678 LH59_03040 PF03652 Holliday junction resolvase LH59_03050 PF01979 Amidohydrolase family LH59_03070 PF03737 Aldolase/RraA LH59_03080 PF00497 Bacterial extracellular solute-binding proteins, family 3 LH59_03085 PF00528 Binding-protein-dependent transport system inner membrane component LH59_03090 PF00528 Binding-protein-dependent transport system inner membrane component LH59_03095 PF00005 ABC transporter LH59_03100 PF00149 Calcineurin-like phosphoesterase LH59_03110 PF00912 Transglycosylase LH59_03115 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LH59_03115 PF01488 Shikimate / quinate 5-dehydrogenase LH59_03115 PF08501 Shikimate dehydrogenase substrate binding domain LH59_03125 PF00005 ABC transporter LH59_03125 PF08402 TOBE domain LH59_03130 PF00528 Binding-protein-dependent transport system inner membrane component LH59_03140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LH59_03140 PF00512 His Kinase A (phospho-acceptor) domain LH59_03140 PF08521 Two-component sensor kinase N-terminal LH59_03145 PF00486 Transcriptional regulatory protein, C terminal LH59_03145 PF00072 Response regulator receiver domain LH59_03150 PF00773 RNB domain LH59_03155 PF05728 Uncharacterised protein family (UPF0227) LH59_03160 PF08245 Mur ligase middle domain LH59_03160 PF02875 Mur ligase family, glutamate ligase domain LH59_03160 PF01225 Mur ligase family, catalytic domain LH59_03165 PF08534 Redoxin LH59_03170 PF01220 Dehydroquinase class II LH59_03175 PF00364 Biotin-requiring enzyme LH59_03180 PF00289 Biotin carboxylase, N-terminal domain LH59_03180 PF02785 Biotin carboxylase C-terminal domain LH59_03180 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LH59_03195 PF00294 pfkB family carbohydrate kinase LH59_03195 PF01467 Cytidylyltransferase-like LH59_03220 PF03062 MBOAT, membrane-bound O-acyltransferase family LH59_03225 PF13193 AMP-binding enzyme C-terminal domain LH59_03225 PF00501 AMP-binding enzyme LH59_03245 PF00268 Ribonucleotide reductase, small chain LH59_03250 PF00317 Ribonucleotide reductase, all-alpha domain LH59_03250 PF02867 Ribonucleotide reductase, barrel domain LH59_03250 PF03477 ATP cone domain LH59_03260 PF01037 Lrp/AsnC ligand binding domain LH59_03265 PF03401 Tripartite tricarboxylate transporter family receptor LH59_03275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_03275 PF03466 LysR substrate binding domain LH59_03290 PF00749 tRNA synthetases class I (E and Q), catalytic domain LH59_03295 PF00583 Acetyltransferase (GNAT) family LH59_03295 PF13380 CoA binding domain LH59_03295 PF13607 Succinyl-CoA ligase like flavodoxin domain LH59_03300 PF00857 Isochorismatase family LH59_03305 PF00528 Binding-protein-dependent transport system inner membrane component LH59_03310 PF00005 ABC transporter LH59_03325 PF04751 Protein of unknown function (DUF615) LH59_03330 PF01523 Putative modulator of DNA gyrase LH59_03335 PF03480 Bacterial extracellular solute-binding protein, family 7 LH59_03340 PF13458 Periplasmic binding protein LH59_03345 PF02653 Branched-chain amino acid transport system / permease component LH59_03350 PF02653 Branched-chain amino acid transport system / permease component LH59_03350 PF11862 Domain of unknown function (DUF3382) LH59_03355 PF12399 Branched-chain amino acid ATP-binding cassette transporter LH59_03355 PF00005 ABC transporter LH59_03360 PF00005 ABC transporter LH59_03365 PF00572 Ribosomal protein L13 LH59_03370 PF00380 Ribosomal protein S9/S16 LH59_03375 PF01118 Semialdehyde dehydrogenase, NAD binding domain LH59_03375 PF02774 Semialdehyde dehydrogenase, dimerisation domain LH59_03385 PF01521 Iron-sulphur cluster biosynthesis LH59_03390 PF03702 Anhydro-N-acetylmuramic acid kinase LH59_03395 PF01476 LysM domain LH59_03395 PF01551 Peptidase family M23 LH59_03400 PF01479 S4 domain LH59_03400 PF00579 tRNA synthetases class I (W and Y) LH59_03410 PF01810 LysE type translocator LH59_03415 PF00464 Serine hydroxymethyltransferase LH59_03420 PF03477 ATP cone domain LH59_03430 PF00857 Isochorismatase family LH59_03435 PF01872 RibD C-terminal domain LH59_03435 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LH59_03450 PF06798 PrkA serine protein kinase C-terminal domain LH59_03450 PF08298 PrkA AAA domain LH59_03455 PF04285 Protein of unknown function (DUF444) LH59_03460 PF04293 SpoVR like protein LH59_03470 PF03466 LysR substrate binding domain LH59_03470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_03475 PF14552 Tautomerase enzyme LH59_03485 PF01323 DSBA-like thioredoxin domain LH59_03495 PF03401 Tripartite tricarboxylate transporter family receptor LH59_03500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_03500 PF03466 LysR substrate binding domain LH59_03515 PF07228 Stage II sporulation protein E (SpoIIE) LH59_03515 PF00672 HAMP domain LH59_03525 PF00842 Alanine racemase, C-terminal domain LH59_03525 PF01168 Alanine racemase, N-terminal domain LH59_03530 PF13581 Histidine kinase-like ATPase domain LH59_03535 PF01740 STAS domain LH59_03550 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LH59_03550 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LH59_03555 PF03401 Tripartite tricarboxylate transporter family receptor LH59_03575 PF01476 LysM domain LH59_03575 PF01464 Transglycosylase SLT domain LH59_03580 PF16123 Hydroxyacylglutathione hydrolase C-terminus LH59_03580 PF00753 Metallo-beta-lactamase superfamily LH59_03585 PF08241 Methyltransferase domain LH59_03590 PF00075 RNase H LH59_03595 PF13533 Biotin-lipoyl like LH59_03600 PF00873 AcrB/AcrD/AcrF family LH59_03605 PF00929 Exonuclease LH59_03620 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 LH59_03635 PF03616 Sodium/glutamate symporter LH59_03645 PF00535 Glycosyl transferase family 2 LH59_03650 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase LH59_03665 PF03466 LysR substrate binding domain LH59_03665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_03685 PF02653 Branched-chain amino acid transport system / permease component LH59_03695 PF00005 ABC transporter LH59_03700 PF12399 Branched-chain amino acid ATP-binding cassette transporter LH59_03700 PF00005 ABC transporter LH59_03705 PF00701 Dihydrodipicolinate synthetase family LH59_03715 PF03466 LysR substrate binding domain LH59_03715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_03720 PF03788 LrgA family LH59_03725 PF04172 LrgB-like family LH59_03730 PF01810 LysE type translocator LH59_03735 PF00892 EamA-like transporter family LH59_03740 PF00392 Bacterial regulatory proteins, gntR family LH59_03740 PF00155 Aminotransferase class I and II LH59_03750 PF00582 Universal stress protein family LH59_03755 PF00679 Elongation factor G C-terminus LH59_03755 PF00009 Elongation factor Tu GTP binding domain LH59_03755 PF14492 Elongation Factor G, domain II LH59_03755 PF03144 Elongation factor Tu domain 2 LH59_03755 PF03764 Elongation factor G, domain IV LH59_03765 PF01037 Lrp/AsnC ligand binding domain LH59_03780 PF00005 ABC transporter LH59_03785 PF01032 FecCD transport family LH59_03795 PF00691 OmpA family LH59_03800 PF07676 WD40-like Beta Propeller Repeat LH59_03800 PF04052 TolB amino-terminal domain LH59_03810 PF02472 Biopolymer transport protein ExbD/TolR LH59_03815 PF01618 MotA/TolQ/ExbB proton channel family LH59_03820 PF03061 Thioesterase superfamily LH59_03825 PF03129 Anticodon binding domain LH59_03825 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LH59_03825 PF04073 Aminoacyl-tRNA editing domain LH59_03830 PF00293 NUDIX domain LH59_03835 PF00072 Response regulator receiver domain LH59_03835 PF00486 Transcriptional regulatory protein, C terminal LH59_03840 PF00512 His Kinase A (phospho-acceptor) domain LH59_03840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LH59_03850 PF01970 Tripartite tricarboxylate transporter TctA family LH59_03855 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LH59_03860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_03860 PF03466 LysR substrate binding domain LH59_03865 PF02525 Flavodoxin-like fold LH59_03870 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LH59_03870 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LH59_03880 PF01970 Tripartite tricarboxylate transporter TctA family LH59_03905 PF01790 Prolipoprotein diacylglyceryl transferase LH59_03910 PF00920 Dehydratase family LH59_03915 PF00034 Cytochrome c LH59_03920 PF01625 Peptide methionine sulfoxide reductase LH59_03925 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LH59_03930 PF01037 Lrp/AsnC ligand binding domain LH59_03980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_03980 PF03466 LysR substrate binding domain LH59_03990 PF07687 Peptidase dimerisation domain LH59_03990 PF01546 Peptidase family M20/M25/M40 LH59_03995 PF01979 Amidohydrolase family LH59_04005 PF02381 MraZ protein, putative antitoxin-like LH59_04010 PF01795 MraW methylase family LH59_04015 PF04999 Cell division protein FtsL LH59_04020 PF00905 Penicillin binding protein transpeptidase domain LH59_04020 PF03717 Penicillin-binding Protein dimerisation domain LH59_04025 PF08245 Mur ligase middle domain LH59_04025 PF02875 Mur ligase family, glutamate ligase domain LH59_04030 PF00953 Glycosyl transferase family 4 LH59_04035 PF08245 Mur ligase middle domain LH59_04035 PF02875 Mur ligase family, glutamate ligase domain LH59_04040 PF01098 Cell cycle protein LH59_04045 PF04101 Glycosyltransferase family 28 C-terminal domain LH59_04045 PF03033 Glycosyltransferase family 28 N-terminal domain LH59_04050 PF08245 Mur ligase middle domain LH59_04050 PF02875 Mur ligase family, glutamate ligase domain LH59_04050 PF01225 Mur ligase family, catalytic domain LH59_04055 PF07478 D-ala D-ala ligase C-terminus LH59_04055 PF01820 D-ala D-ala ligase N-terminus LH59_04060 PF08478 POTRA domain, FtsQ-type LH59_04060 PF03799 Cell division protein FtsQ LH59_04065 PF02491 SHS2 domain inserted in FTSA LH59_04070 PF12327 FtsZ family, C-terminal domain LH59_04070 PF00091 Tubulin/FtsZ family, GTPase domain LH59_04075 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LH59_04085 PF01476 LysM domain LH59_04085 PF08525 Opacity-associated protein A N-terminal motif LH59_04085 PF01551 Peptidase family M23 LH59_04090 PF02810 SEC-C motif LH59_04090 PF07517 SecA DEAD-like domain LH59_04090 PF01043 SecA preprotein cross-linking domain LH59_04090 PF07516 SecA Wing and Scaffold domain LH59_04100 PF07729 FCD domain LH59_04100 PF00392 Bacterial regulatory proteins, gntR family LH59_04105 PF03401 Tripartite tricarboxylate transporter family receptor LH59_04110 PF00205 Thiamine pyrophosphate enzyme, central domain LH59_04110 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LH59_04110 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LH59_04120 PF00106 short chain dehydrogenase LH59_04125 PF01037 Lrp/AsnC ligand binding domain LH59_04135 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP LH59_04140 PF00571 CBS domain LH59_04140 PF03448 MgtE intracellular N domain LH59_04140 PF01769 Divalent cation transporter LH59_04145 PF03061 Thioesterase superfamily LH59_04150 PF03601 Conserved hypothetical protein 698 LH59_04155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_04155 PF03466 LysR substrate binding domain LH59_04160 PF07687 Peptidase dimerisation domain LH59_04160 PF01546 Peptidase family M20/M25/M40 LH59_04165 PF00501 AMP-binding enzyme LH59_04165 PF13193 AMP-binding enzyme C-terminal domain LH59_04170 PF00459 Inositol monophosphatase family LH59_04175 PF01266 FAD dependent oxidoreductase LH59_04175 PF05430 S-adenosyl-L-methionine-dependent methyltransferase LH59_04180 PF01055 Glycosyl hydrolases family 31 LH59_04180 PF13802 Galactose mutarotase-like LH59_04185 PF00005 ABC transporter LH59_04185 PF09383 NIL domain LH59_04190 PF00528 Binding-protein-dependent transport system inner membrane component LH59_04195 PF03180 NLPA lipoprotein LH59_04205 PF08281 Sigma-70, region 4 LH59_04205 PF04542 Sigma-70 region 2 LH59_04210 PF16220 Domain of unknown function (DUF4880) LH59_04210 PF04773 FecR protein LH59_04215 PF00593 TonB dependent receptor LH59_04215 PF07715 TonB-dependent Receptor Plug Domain LH59_04230 PF02203 Tar ligand binding domain homologue LH59_04230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LH59_04230 PF00672 HAMP domain LH59_04235 PF03466 LysR substrate binding domain LH59_04235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_04245 PF01475 Ferric uptake regulator family LH59_04265 PF03692 Putative zinc- or iron-chelating domain LH59_04275 PF00884 Sulfatase LH59_04280 PF05170 AsmA family LH59_04285 PF00990 Diguanylate cyclase, GGDEF domain LH59_04285 PF17151 Periplasmic sensor domain LH59_04315 PF02525 Flavodoxin-like fold LH59_04330 PF00691 OmpA family LH59_04330 PF04972 BON domain LH59_04335 PF01329 Pterin 4 alpha carbinolamine dehydratase LH59_04350 PF01494 FAD binding domain LH59_04360 PF00483 Nucleotidyl transferase LH59_04365 PF01636 Phosphotransferase enzyme family LH59_04370 PF04453 LPS transport system D LH59_04375 PF00639 PPIC-type PPIASE domain LH59_04375 PF09312 SurA N-terminal domain LH59_04380 PF00398 Ribosomal RNA adenine dimethylase LH59_04385 PF02595 Glycerate kinase family LH59_04390 PF02887 Pyruvate kinase, alpha/beta domain LH59_04390 PF00224 Pyruvate kinase, barrel domain LH59_04395 PF07670 Nucleoside recognition LH59_04400 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LH59_04400 PF02770 Acyl-CoA dehydrogenase, middle domain LH59_04400 PF09317 Domain of unknown function (DUF1974) LH59_04400 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LH59_04405 PF01327 Polypeptide deformylase LH59_04410 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LH59_04415 PF00266 Aminotransferase class-V LH59_04425 PF01553 Acyltransferase LH59_04435 PF02092 Glycyl-tRNA synthetase beta subunit LH59_04435 PF05746 DALR anticodon binding domain LH59_04440 PF02091 Glycyl-tRNA synthetase alpha subunit LH59_04445 PF00378 Enoyl-CoA hydratase/isomerase LH59_04455 PF08447 PAS fold LH59_04455 PF13426 PAS domain LH59_04455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LH59_04465 PF02515 CoA-transferase family III LH59_04470 PF13452 N-terminal half of MaoC dehydratase LH59_04475 PF00106 short chain dehydrogenase LH59_04485 PF03401 Tripartite tricarboxylate transporter family receptor LH59_04490 PF03060 Nitronate monooxygenase LH59_04495 PF03401 Tripartite tricarboxylate transporter family receptor LH59_04500 PF13193 AMP-binding enzyme C-terminal domain LH59_04500 PF00501 AMP-binding enzyme LH59_04505 PF00108 Thiolase, N-terminal domain LH59_04505 PF02803 Thiolase, C-terminal domain LH59_04515 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LH59_04515 PF02770 Acyl-CoA dehydrogenase, middle domain LH59_04515 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LH59_04520 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LH59_04520 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LH59_04520 PF02770 Acyl-CoA dehydrogenase, middle domain LH59_04525 PF00378 Enoyl-CoA hydratase/isomerase LH59_04530 PF03466 LysR substrate binding domain LH59_04530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_04540 PF02515 CoA-transferase family III LH59_04545 PF03328 HpcH/HpaI aldolase/citrate lyase family LH59_04550 PF00294 pfkB family carbohydrate kinase LH59_04555 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LH59_04560 PF12626 Polymerase A arginine-rich C-terminus LH59_04560 PF01743 Poly A polymerase head domain LH59_04560 PF12627 Probable RNA and SrmB- binding site of polymerase A LH59_04570 PF00308 Bacterial dnaA protein LH59_04575 PF00586 AIR synthase related protein, N-terminal domain LH59_04575 PF02769 AIR synthase related protein, C-terminal domain LH59_04590 PF08676 MutL C terminal dimerisation domain LH59_04590 PF01119 DNA mismatch repair protein, C-terminal domain LH59_04595 PF09335 SNARE associated Golgi protein LH59_04600 PF07715 TonB-dependent Receptor Plug Domain LH59_04600 PF00593 TonB dependent receptor LH59_04605 PF01520 N-acetylmuramoyl-L-alanine amidase LH59_04605 PF11741 AMIN domain LH59_04610 PF10415 Fumarase C C-terminus LH59_04610 PF00206 Lyase LH59_04620 PF03401 Tripartite tricarboxylate transporter family receptor LH59_04625 PF03466 LysR substrate binding domain LH59_04625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_04635 PF13520 Amino acid permease LH59_04640 PF02515 CoA-transferase family III LH59_04650 PF02770 Acyl-CoA dehydrogenase, middle domain LH59_04650 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LH59_04650 PF18158 Adaptive response protein AidB N-terminal domain LH59_04655 PF03466 LysR substrate binding domain LH59_04655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_04660 PF01557 Fumarylacetoacetate (FAA) hydrolase family LH59_04670 PF01070 FMN-dependent dehydrogenase LH59_04675 PF03401 Tripartite tricarboxylate transporter family receptor LH59_04680 PF02668 Taurine catabolism dioxygenase TauD, TfdA family LH59_04685 PF00465 Iron-containing alcohol dehydrogenase LH59_04690 PF03466 LysR substrate binding domain LH59_04690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_04695 PF00551 Formyl transferase LH59_04700 PF01266 FAD dependent oxidoreductase LH59_04705 PF01613 Flavin reductase like domain LH59_04710 PF01243 Pyridoxamine 5'-phosphate oxidase LH59_04710 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LH59_04720 PF07690 Major Facilitator Superfamily LH59_04725 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LH59_04730 PF12704 MacB-like periplasmic core domain LH59_04730 PF02687 FtsX-like permease family LH59_04730 PF00005 ABC transporter LH59_04735 PF02321 Outer membrane efflux protein LH59_04740 PF00899 ThiF family LH59_04745 PF00355 Rieske [2Fe-2S] domain LH59_04750 PF13577 SnoaL-like domain LH59_04755 PF00355 Rieske [2Fe-2S] domain LH59_04755 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LH59_04765 PF03466 LysR substrate binding domain LH59_04765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_04775 PF04715 Anthranilate synthase component I, N terminal region LH59_04775 PF00425 chorismate binding enzyme LH59_04780 PF17760 UvrA interaction domain LH59_04780 PF00005 ABC transporter LH59_04780 PF17755 UvrA DNA-binding domain LH59_04790 PF01081 KDPG and KHG aldolase LH59_04795 PF00294 pfkB family carbohydrate kinase LH59_04805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_04805 PF03466 LysR substrate binding domain LH59_04810 PF00535 Glycosyl transferase family 2 LH59_04815 PF00005 ABC transporter LH59_04820 PF00005 ABC transporter LH59_04820 PF12399 Branched-chain amino acid ATP-binding cassette transporter LH59_04840 PF04199 Putative cyclase LH59_04855 PF00501 AMP-binding enzyme LH59_04855 PF13193 AMP-binding enzyme C-terminal domain LH59_04860 PF00866 Ring hydroxylating beta subunit LH59_04865 PF00355 Rieske [2Fe-2S] domain LH59_04865 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LH59_04870 PF00111 2Fe-2S iron-sulfur cluster binding domain LH59_04890 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LH59_04900 PF00528 Binding-protein-dependent transport system inner membrane component LH59_04900 PF12911 N-terminal TM domain of oligopeptide transport permease C LH59_04905 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LH59_04905 PF00005 ABC transporter LH59_04910 PF00005 ABC transporter LH59_04910 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LH59_04930 PF02522 Aminoglycoside 3-N-acetyltransferase LH59_04935 PF00005 ABC transporter LH59_04935 PF12848 ABC transporter LH59_04940 PF01850 PIN domain LH59_04955 PF03776 Septum formation topological specificity factor MinE LH59_04960 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LH59_04965 PF05209 Septum formation inhibitor MinC, N-terminal domain LH59_04965 PF03775 Septum formation inhibitor MinC, C-terminal domain LH59_04970 PF00749 tRNA synthetases class I (E and Q), catalytic domain LH59_04970 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain LH59_04980 PF02322 Cytochrome bd terminal oxidase subunit II LH59_04985 PF00271 Helicase conserved C-terminal domain LH59_04985 PF00570 HRDC domain LH59_04985 PF16124 RecQ zinc-binding LH59_04985 PF00270 DEAD/DEAH box helicase LH59_04985 PF09382 RQC domain LH59_04995 PF00486 Transcriptional regulatory protein, C terminal LH59_04995 PF00072 Response regulator receiver domain LH59_05000 PF00512 His Kinase A (phospho-acceptor) domain LH59_05000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LH59_05005 PF05491 RuvB C-terminal winged helix domain LH59_05005 PF17864 RuvB AAA lid domain LH59_05005 PF05496 Holliday junction DNA helicase RuvB P-loop domain LH59_05010 PF00291 Pyridoxal-phosphate dependent enzyme LH59_05015 PF08338 Domain of unknown function (DUF1731) LH59_05015 PF01370 NAD dependent epimerase/dehydratase family LH59_05020 PF07499 RuvA, C-terminal domain LH59_05020 PF01330 RuvA N terminal domain LH59_05025 PF02075 Crossover junction endodeoxyribonuclease RuvC LH59_05030 PF02142 MGS-like domain LH59_05030 PF01808 AICARFT/IMPCHase bienzyme LH59_05035 PF02954 Bacterial regulatory protein, Fis family LH59_05040 PF01207 Dihydrouridine synthase (Dus) LH59_05045 PF01494 FAD binding domain LH59_05055 PF00557 Metallopeptidase family M24 LH59_05055 PF05195 Aminopeptidase P, N-terminal domain LH59_05070 PF00690 Cation transporter/ATPase, N-terminus LH59_05070 PF00689 Cation transporting ATPase, C-terminus LH59_05075 PF13609 Gram-negative porin LH59_05085 PF00483 Nucleotidyl transferase LH59_05090 PF13181 Tetratricopeptide repeat LH59_05090 PF01435 Peptidase family M48 LH59_05110 PF01063 Amino-transferase class IV LH59_05125 PF01494 FAD binding domain LH59_05130 PF07690 Major Facilitator Superfamily LH59_05135 PF07715 TonB-dependent Receptor Plug Domain LH59_05135 PF00593 TonB dependent receptor LH59_05145 PF00270 DEAD/DEAH box helicase LH59_05145 PF00271 Helicase conserved C-terminal domain LH59_05160 PF18146 Damage-inducible protein CinA KH domain LH59_05160 PF00994 Probable molybdopterin binding domain LH59_05160 PF02464 Competence-damaged protein LH59_05165 PF09339 IclR helix-turn-helix domain LH59_05165 PF01614 Bacterial transcriptional regulator LH59_05170 PF03401 Tripartite tricarboxylate transporter family receptor LH59_05180 PF01180 Dihydroorotate dehydrogenase LH59_05185 PF04377 Arginine-tRNA-protein transferase, C terminus LH59_05185 PF04376 Arginine-tRNA-protein transferase, N terminus LH59_05190 PF03588 Leucyl/phenylalanyl-tRNA protein transferase LH59_05200 PF03466 LysR substrate binding domain LH59_05200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_05260 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LH59_05260 PF01565 FAD binding domain LH59_05265 PF01113 Dihydrodipicolinate reductase, N-terminus LH59_05265 PF05173 Dihydrodipicolinate reductase, C-terminus LH59_05270 PF04355 SmpA / OmlA family LH59_05275 PF01475 Ferric uptake regulator family LH59_05280 PF02463 RecF/RecN/SMC N terminal domain LH59_05285 PF01513 ATP-NAD kinase LH59_05290 PF01628 HrcA protein C terminal domain LH59_05290 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding LH59_05295 PF00762 Ferrochelatase LH59_05305 PF01025 GrpE LH59_05315 PF00012 Hsp70 protein LH59_05320 PF00684 DnaJ central domain LH59_05320 PF01556 DnaJ C terminal domain LH59_05320 PF00226 DnaJ domain LH59_05330 PF00675 Insulinase (Peptidase family M16) LH59_05330 PF05193 Peptidase M16 inactive domain LH59_05335 PF13302 Acetyltransferase (GNAT) domain LH59_05355 PF00004 ATPase family associated with various cellular activities (AAA) LH59_05355 PF17862 AAA+ lid domain LH59_05355 PF01434 Peptidase family M41 LH59_05360 PF00034 Cytochrome c LH59_05375 PF00180 Isocitrate/isopropylmalate dehydrogenase LH59_05390 PF02203 Tar ligand binding domain homologue LH59_05390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LH59_05390 PF00672 HAMP domain LH59_05395 PF00701 Dihydrodipicolinate synthetase family LH59_05410 PF00072 Response regulator receiver domain LH59_05410 PF00486 Transcriptional regulatory protein, C terminal LH59_05415 PF00512 His Kinase A (phospho-acceptor) domain LH59_05415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LH59_05415 PF13493 Domain of unknown function (DUF4118) LH59_05415 PF13492 GAF domain LH59_05415 PF02702 Osmosensitive K+ channel His kinase sensor domain LH59_05420 PF02669 K+-transporting ATPase, c chain LH59_05430 PF03814 Potassium-transporting ATPase A subunit LH59_05450 PF00474 Sodium:solute symporter family LH59_05455 PF00893 Small Multidrug Resistance protein LH59_05460 PF01713 Smr domain LH59_05460 PF00488 MutS domain V LH59_05465 PF07992 Pyridine nucleotide-disulphide oxidoreductase LH59_05470 PF01580 FtsK/SpoIIIE family LH59_05470 PF09397 Ftsk gamma domain LH59_05470 PF17854 FtsK alpha domain LH59_05470 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LH59_05475 PF03548 Outer membrane lipoprotein carrier protein LolA LH59_05480 PF01042 Endoribonuclease L-PSP LH59_05485 PF07969 Amidohydrolase family LH59_05490 PF00571 CBS domain LH59_05490 PF01380 SIS domain LH59_05495 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LH59_05495 PF00005 ABC transporter LH59_05500 PF00005 ABC transporter LH59_05500 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LH59_05505 PF12911 N-terminal TM domain of oligopeptide transport permease C LH59_05505 PF00528 Binding-protein-dependent transport system inner membrane component LH59_05510 PF00528 Binding-protein-dependent transport system inner membrane component LH59_05515 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LH59_05525 PF00795 Carbon-nitrogen hydrolase LH59_05530 PF12002 MgsA AAA+ ATPase C terminal LH59_05530 PF16193 AAA C-terminal domain LH59_05530 PF00004 ATPase family associated with various cellular activities (AAA) LH59_05535 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LH59_05535 PF02403 Seryl-tRNA synthetase N-terminal domain LH59_05550 PF01979 Amidohydrolase family LH59_05560 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LH59_05560 PF13378 Enolase C-terminal domain-like LH59_05565 PF00701 Dihydrodipicolinate synthetase family LH59_05570 PF03401 Tripartite tricarboxylate transporter family receptor LH59_05575 PF00593 TonB dependent receptor LH59_05575 PF07715 TonB-dependent Receptor Plug Domain LH59_05580 PF01497 Periplasmic binding protein LH59_05585 PF00005 ABC transporter LH59_05590 PF01032 FecCD transport family LH59_05595 PF01032 FecCD transport family LH59_05600 PF00005 ABC transporter LH59_05605 PF00664 ABC transporter transmembrane region LH59_05605 PF08021 Siderophore-interacting FAD-binding domain LH59_05605 PF04954 Siderophore-interacting protein LH59_05605 PF00005 ABC transporter LH59_05625 PF00106 short chain dehydrogenase LH59_05630 PF03883 Peroxide stress protein YaaA LH59_05635 PF12805 FUSC-like inner membrane protein yccS LH59_05640 PF00205 Thiamine pyrophosphate enzyme, central domain LH59_05640 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LH59_05640 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LH59_05645 PF10369 Small subunit of acetolactate synthase LH59_05650 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LH59_05650 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LH59_05655 PF01066 CDP-alcohol phosphatidyltransferase LH59_05665 PF00312 Ribosomal protein S15 LH59_05670 PF00575 S1 RNA binding domain LH59_05670 PF01138 3' exoribonuclease family, domain 1 LH59_05670 PF03725 3' exoribonuclease family, domain 2 LH59_05670 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LH59_05670 PF00013 KH domain LH59_05680 PF00291 Pyridoxal-phosphate dependent enzyme LH59_05680 PF13291 ACT domain LH59_05690 PF00795 Carbon-nitrogen hydrolase LH59_05695 PF03466 LysR substrate binding domain LH59_05695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_05700 PF12852 Cupin LH59_05700 PF12833 Helix-turn-helix domain LH59_05705 PF07690 Major Facilitator Superfamily LH59_05720 PF08659 KR domain LH59_05720 PF00109 Beta-ketoacyl synthase, N-terminal domain LH59_05720 PF14765 Polyketide synthase dehydratase LH59_05720 PF16197 Ketoacyl-synthetase C-terminal extension LH59_05720 PF08990 Erythronolide synthase docking LH59_05720 PF08240 Alcohol dehydrogenase GroES-like domain LH59_05720 PF00698 Acyl transferase domain LH59_05720 PF00550 Phosphopantetheine attachment site LH59_05720 PF02801 Beta-ketoacyl synthase, C-terminal domain LH59_05725 PF00121 Triosephosphate isomerase LH59_05730 PF03840 Preprotein translocase SecG subunit LH59_05770 PF00672 HAMP domain LH59_05770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LH59_05770 PF02203 Tar ligand binding domain homologue LH59_05790 PF12728 Helix-turn-helix domain LH59_05790 PF12727 PBP superfamily domain LH59_05795 PF13195 Protein of unknown function (DUF4011) LH59_05795 PF13087 AAA domain LH59_05795 PF13086 AAA domain LH59_05795 PF13195 Protein of unknown function (DUF4011) LH59_05795 PF13087 AAA domain LH59_05795 PF13086 AAA domain LH59_05825 PF00005 ABC transporter LH59_05840 PF04542 Sigma-70 region 2 LH59_05840 PF08281 Sigma-70, region 4 LH59_05845 PF04773 FecR protein LH59_05845 PF16220 Domain of unknown function (DUF4880) LH59_05850 PF00593 TonB dependent receptor LH59_05850 PF07715 TonB-dependent Receptor Plug Domain LH59_05865 PF00512 His Kinase A (phospho-acceptor) domain LH59_05865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LH59_05870 PF00486 Transcriptional regulatory protein, C terminal LH59_05870 PF00072 Response regulator receiver domain LH59_05875 PF03600 Citrate transporter LH59_05880 PF00106 short chain dehydrogenase LH59_05890 PF00149 Calcineurin-like phosphoesterase LH59_05895 PF00990 Diguanylate cyclase, GGDEF domain LH59_05895 PF00072 Response regulator receiver domain LH59_05900 PF00483 Nucleotidyl transferase LH59_05905 PF13426 PAS domain LH59_05905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LH59_05905 PF00072 Response regulator receiver domain LH59_05920 PF00158 Sigma-54 interaction domain LH59_05920 PF02954 Bacterial regulatory protein, Fis family LH59_05925 PF04405 Domain of Unknown function (DUF542) LH59_05925 PF01814 Hemerythrin HHE cation binding domain LH59_05930 PF06906 Protein of unknown function (DUF1272) LH59_05935 PF05661 Protein of unknown function (DUF808) LH59_05940 PF00593 TonB dependent receptor LH59_05940 PF07660 Secretin and TonB N terminus short domain LH59_05940 PF07715 TonB-dependent Receptor Plug Domain LH59_05945 PF01037 Lrp/AsnC ligand binding domain LH59_05955 PF00528 Binding-protein-dependent transport system inner membrane component LH59_05960 PF12911 N-terminal TM domain of oligopeptide transport permease C LH59_05960 PF00528 Binding-protein-dependent transport system inner membrane component LH59_05965 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LH59_05965 PF00005 ABC transporter LH59_05975 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LH59_05980 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LH59_05990 PF02321 Outer membrane efflux protein LH59_05995 PF00873 AcrB/AcrD/AcrF family LH59_06000 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LH59_06010 PF02028 BCCT, betaine/carnitine/choline family transporter LH59_06015 PF13533 Biotin-lipoyl like LH59_06020 PF00873 AcrB/AcrD/AcrF family LH59_06025 PF02321 Outer membrane efflux protein LH59_06035 PF02321 Outer membrane efflux protein LH59_06040 PF00873 AcrB/AcrD/AcrF family LH59_06045 PF00529 HlyD membrane-fusion protein of T1SS LH59_06045 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LH59_06050 PF00440 Bacterial regulatory proteins, tetR family LH59_06050 PF08361 MAATS-type transcriptional repressor, C-terminal region LH59_06055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_06055 PF03466 LysR substrate binding domain LH59_06060 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LH59_06070 PF00781 Diacylglycerol kinase catalytic domain LH59_06080 PF01569 PAP2 superfamily LH59_06100 PF13609 Gram-negative porin LH59_06105 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LH59_06110 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LH59_06115 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LH59_06120 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LH59_06130 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LH59_06130 PF10531 SLBB domain LH59_06130 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LH59_06135 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LH59_06135 PF00384 Molybdopterin oxidoreductase LH59_06135 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal LH59_06140 PF00146 NADH dehydrogenase LH59_06145 PF12838 4Fe-4S dicluster domain LH59_06150 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LH59_06155 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LH59_06160 PF00361 Proton-conducting membrane transporter LH59_06160 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LH59_06165 PF00361 Proton-conducting membrane transporter LH59_06165 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus LH59_06170 PF00361 Proton-conducting membrane transporter LH59_06180 PF07715 TonB-dependent Receptor Plug Domain LH59_06180 PF00593 TonB dependent receptor LH59_06190 PF17757 UvrB interaction domain LH59_06190 PF03461 TRCF domain LH59_06190 PF00271 Helicase conserved C-terminal domain LH59_06190 PF02559 CarD-like/TRCF domain LH59_06190 PF00270 DEAD/DEAH box helicase LH59_06195 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LH59_06200 PF02542 YgbB family LH59_06210 PF02627 Carboxymuconolactone decarboxylase family LH59_06215 PF00578 AhpC/TSA family LH59_06220 PF00672 HAMP domain LH59_06220 PF00512 His Kinase A (phospho-acceptor) domain LH59_06220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LH59_06225 PF00072 Response regulator receiver domain LH59_06225 PF00486 Transcriptional regulatory protein, C terminal LH59_06230 PF00814 Glycoprotease family LH59_06235 PF03167 Uracil DNA glycosylase superfamily LH59_06240 PF07690 Major Facilitator Superfamily LH59_06245 PF02463 RecF/RecN/SMC N terminal domain LH59_06245 PF06470 SMC proteins Flexible Hinge Domain LH59_06255 PF00533 BRCA1 C Terminus (BRCT) domain LH59_06255 PF03120 NAD-dependent DNA ligase OB-fold domain LH59_06255 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LH59_06255 PF01653 NAD-dependent DNA ligase adenylation domain LH59_06255 PF12826 Helix-hairpin-helix motif LH59_06270 PF04279 Intracellular septation protein A LH59_06275 PF01641 SelR domain LH59_06280 PF00005 ABC transporter LH59_06285 PF02361 Cobalt transport protein LH59_06290 PF02632 BioY family LH59_06310 PF00005 ABC transporter LH59_06320 PF05506 Domain of unknown function (DUF756) LH59_06320 PF04185 Phosphoesterase family LH59_06325 PF01063 Amino-transferase class IV LH59_06340 PF02653 Branched-chain amino acid transport system / permease component LH59_06350 PF00005 ABC transporter LH59_06355 PF12399 Branched-chain amino acid ATP-binding cassette transporter LH59_06355 PF00005 ABC transporter LH59_06360 PF00730 HhH-GPD superfamily base excision DNA repair protein LH59_06360 PF10576 Iron-sulfur binding domain of endonuclease III LH59_06360 PF00633 Helix-hairpin-helix motif LH59_06365 PF04060 Putative Fe-S cluster LH59_06375 PF00970 Oxidoreductase FAD-binding domain LH59_06375 PF00175 Oxidoreductase NAD-binding domain LH59_06380 PF11953 Domain of unknown function (DUF3470) LH59_06380 PF00037 4Fe-4S binding domain LH59_06385 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LH59_06385 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LH59_06390 PF01042 Endoribonuclease L-PSP LH59_06400 PF06167 Glucose-regulated metallo-peptidase M90 LH59_06405 PF04607 Region found in RelA / SpoT proteins LH59_06405 PF13291 ACT domain LH59_06405 PF02824 TGS domain LH59_06410 PF07690 Major Facilitator Superfamily LH59_06415 PF07687 Peptidase dimerisation domain LH59_06415 PF01546 Peptidase family M20/M25/M40 LH59_06420 PF00291 Pyridoxal-phosphate dependent enzyme LH59_06425 PF00290 Tryptophan synthase alpha chain LH59_06430 PF01039 Carboxyl transferase domain LH59_06430 PF17848 Acetyl-coA carboxylase zinc finger domain LH59_06435 PF09411 Lipid A 3-O-deacylase (PagL) LH59_06440 PF10150 Ribonuclease E/G family LH59_06440 PF12111 Polyribonucleotide phosphorylase C terminal LH59_06440 PF00575 S1 RNA binding domain LH59_06445 PF01479 S4 domain LH59_06445 PF00849 RNA pseudouridylate synthase LH59_06450 PF13419 Haloacid dehalogenase-like hydrolase LH59_06455 PF00174 Oxidoreductase molybdopterin binding domain LH59_06460 PF01794 Ferric reductase like transmembrane component LH59_06470 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LH59_06475 PF02545 Maf-like protein LH59_06480 PF02620 Large ribosomal RNA subunit accumulation protein YceD LH59_06485 PF01783 Ribosomal L32p protein family LH59_06490 PF02504 Fatty acid synthesis protein LH59_06495 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LH59_06495 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LH59_06500 PF00698 Acyl transferase domain LH59_06510 PF00550 Phosphopantetheine attachment site LH59_06515 PF00109 Beta-ketoacyl synthase, N-terminal domain LH59_06515 PF02801 Beta-ketoacyl synthase, C-terminal domain LH59_06525 PF04542 Sigma-70 region 2 LH59_06525 PF08281 Sigma-70, region 4 LH59_06540 PF13180 PDZ domain LH59_06545 PF00009 Elongation factor Tu GTP binding domain LH59_06545 PF00679 Elongation factor G C-terminus LH59_06545 PF06421 GTP-binding protein LepA C-terminus LH59_06545 PF03144 Elongation factor Tu domain 2 LH59_06550 PF10502 Signal peptidase, peptidase S26 LH59_06555 PF14622 Ribonuclease-III-like LH59_06555 PF00035 Double-stranded RNA binding motif LH59_06560 PF07650 KH domain LH59_06560 PF01926 50S ribosome-binding GTPase LH59_06565 PF02565 Recombination protein O C terminal LH59_06565 PF11967 Recombination protein O N terminal LH59_06585 PF03401 Tripartite tricarboxylate transporter family receptor LH59_06600 PF01027 Inhibitor of apoptosis-promoting Bax1 LH59_06615 PF00883 Cytosol aminopeptidase family, catalytic domain LH59_06615 PF02789 Cytosol aminopeptidase family, N-terminal domain LH59_06625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_06635 PF00171 Aldehyde dehydrogenase family LH59_06640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_06640 PF03466 LysR substrate binding domain LH59_06650 PF00877 NlpC/P60 family LH59_06655 PF13193 AMP-binding enzyme C-terminal domain LH59_06655 PF00501 AMP-binding enzyme LH59_06655 PF16177 Acetyl-coenzyme A synthetase N-terminus LH59_06660 PF03928 Haem-degrading LH59_06680 PF00892 EamA-like transporter family LH59_06685 PF01212 Beta-eliminating lyase LH59_06690 PF00202 Aminotransferase class-III LH59_06705 PF00067 Cytochrome P450 LH59_06710 PF01370 NAD dependent epimerase/dehydratase family LH59_06725 PF01144 Coenzyme A transferase LH59_06730 PF01144 Coenzyme A transferase LH59_06735 PF13673 Acetyltransferase (GNAT) domain LH59_06745 PF01112 Asparaginase LH59_06750 PF00005 ABC transporter LH59_06750 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LH59_06755 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LH59_06760 PF00528 Binding-protein-dependent transport system inner membrane component LH59_06765 PF12911 N-terminal TM domain of oligopeptide transport permease C LH59_06765 PF00528 Binding-protein-dependent transport system inner membrane component LH59_06770 PF03576 Peptidase family S58 LH59_06780 PF00557 Metallopeptidase family M24 LH59_06780 PF01321 Creatinase/Prolidase N-terminal domain LH59_06790 PF06418 CTP synthase N-terminus LH59_06790 PF00117 Glutamine amidotransferase class-I LH59_06800 PF00113 Enolase, C-terminal TIM barrel domain LH59_06800 PF03952 Enolase, N-terminal domain LH59_06805 PF04977 Septum formation initiator LH59_06815 PF01430 Hsp33 protein LH59_06825 PF13193 AMP-binding enzyme C-terminal domain LH59_06825 PF00501 AMP-binding enzyme LH59_06855 PF02926 THUMP domain LH59_06855 PF01170 Putative RNA methylase family UPF0020 LH59_06865 PF03972 MmgE/PrpD family LH59_06870 PF00285 Citrate synthase, C-terminal domain LH59_06880 PF00056 lactate/malate dehydrogenase, NAD binding domain LH59_06880 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LH59_06885 PF00392 Bacterial regulatory proteins, gntR family LH59_06885 PF07702 UTRA domain LH59_06890 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LH59_06895 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LH59_06900 PF00890 FAD binding domain LH59_06900 PF02910 Fumarate reductase flavoprotein C-term LH59_06905 PF13085 2Fe-2S iron-sulfur cluster binding domain LH59_06910 PF03937 Flavinator of succinate dehydrogenase LH59_06915 PF00285 Citrate synthase, C-terminal domain LH59_06930 PF00390 Malic enzyme, N-terminal domain LH59_06930 PF03949 Malic enzyme, NAD binding domain LH59_06930 PF01515 Phosphate acetyl/butaryl transferase LH59_06935 PF00456 Transketolase, thiamine diphosphate binding domain LH59_06935 PF17831 Pyruvate dehydrogenase E1 component middle domain LH59_06940 PF03169 OPT oligopeptide transporter protein LH59_06945 PF07687 Peptidase dimerisation domain LH59_06945 PF01546 Peptidase family M20/M25/M40 LH59_06950 PF01546 Peptidase family M20/M25/M40 LH59_06950 PF07687 Peptidase dimerisation domain LH59_06960 PF00291 Pyridoxal-phosphate dependent enzyme LH59_06965 PF01037 Lrp/AsnC ligand binding domain LH59_06965 PF13404 AsnC-type helix-turn-helix domain LH59_06970 PF00676 Dehydrogenase E1 component LH59_06970 PF16870 2-oxoglutarate dehydrogenase C-terminal LH59_06970 PF16078 2-oxoglutarate dehydrogenase N-terminus LH59_06970 PF02779 Transketolase, pyrimidine binding domain LH59_06980 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LH59_06980 PF07992 Pyridine nucleotide-disulphide oxidoreductase LH59_06985 PF03969 AFG1-like ATPase LH59_06990 PF08281 Sigma-70, region 4 LH59_06990 PF04542 Sigma-70 region 2 LH59_07025 PF00579 tRNA synthetases class I (W and Y) LH59_07035 PF16921 Tex protein YqgF-like domain LH59_07035 PF09371 Tex-like protein N-terminal domain LH59_07035 PF00575 S1 RNA binding domain LH59_07035 PF17674 HHH domain LH59_07040 PF13307 Helicase C-terminal domain LH59_07040 PF04851 Type III restriction enzyme, res subunit LH59_07045 PF13525 Outer membrane lipoprotein LH59_07050 PF01479 S4 domain LH59_07050 PF00849 RNA pseudouridylate synthase LH59_07060 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus LH59_07065 PF00106 short chain dehydrogenase LH59_07070 PF05233 PHB accumulation regulatory domain LH59_07070 PF07879 PHB/PHA accumulation regulator DNA-binding domain LH59_07075 PF10634 Fe2+ transport protein LH59_07095 PF08479 POTRA domain, ShlB-type LH59_07095 PF17287 POTRA domain LH59_07095 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB LH59_07105 PF02567 Phenazine biosynthesis-like protein LH59_07110 PF04972 BON domain LH59_07120 PF05532 CsbD-like LH59_07130 PF02875 Mur ligase family, glutamate ligase domain LH59_07130 PF08443 RimK-like ATP-grasp domain LH59_07130 PF08245 Mur ligase middle domain LH59_07135 PF02875 Mur ligase family, glutamate ligase domain LH59_07135 PF08245 Mur ligase middle domain LH59_07135 PF08443 RimK-like ATP-grasp domain LH59_07140 PF00664 ABC transporter transmembrane region LH59_07140 PF00005 ABC transporter LH59_07155 PF04305 Protein of unknown function (DUF455) LH59_07160 PF03475 3-alpha domain LH59_07160 PF03473 MOSC domain LH59_07165 PF13406 Transglycosylase SLT domain LH59_07180 PF02770 Acyl-CoA dehydrogenase, middle domain LH59_07180 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LH59_07180 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LH59_07190 PF13193 AMP-binding enzyme C-terminal domain LH59_07190 PF00501 AMP-binding enzyme LH59_07200 PF03062 MBOAT, membrane-bound O-acyltransferase family LH59_07210 PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX LH59_07220 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LH59_07220 PF13632 Glycosyl transferase family group 2 LH59_07230 PF02350 UDP-N-acetylglucosamine 2-epimerase LH59_07235 PF01545 Cation efflux family LH59_07240 PF07690 Major Facilitator Superfamily LH59_07245 PF13419 Haloacid dehalogenase-like hydrolase LH59_07255 PF00691 OmpA family LH59_07260 PF03989 DNA gyrase C-terminal domain, beta-propeller LH59_07260 PF00521 DNA gyrase/topoisomerase IV, subunit A LH59_07265 PF00266 Aminotransferase class-V LH59_07270 PF01817 Chorismate mutase type II LH59_07270 PF01842 ACT domain LH59_07270 PF00800 Prephenate dehydratase LH59_07285 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LH59_07290 PF02224 Cytidylate kinase LH59_07295 PF00575 S1 RNA binding domain LH59_07300 PF00216 Bacterial DNA-binding protein LH59_07310 PF18073 Rubredoxin metal binding domain LH59_07320 PF01370 NAD dependent epimerase/dehydratase family LH59_07330 PF00291 Pyridoxal-phosphate dependent enzyme LH59_07335 PF03401 Tripartite tricarboxylate transporter family receptor LH59_07350 PF13406 Transglycosylase SLT domain LH59_07355 PF00850 Histone deacetylase domain LH59_07360 PF01012 Electron transfer flavoprotein domain LH59_07365 PF01012 Electron transfer flavoprotein domain LH59_07365 PF00766 Electron transfer flavoprotein FAD-binding domain LH59_07370 PF06826 Predicted Permease Membrane Region LH59_07375 PF00155 Aminotransferase class I and II LH59_07380 PF06826 Predicted Permease Membrane Region LH59_07380 PF02080 TrkA-C domain LH59_07385 PF12806 Acetyl-CoA dehydrogenase C-terminal like LH59_07385 PF02770 Acyl-CoA dehydrogenase, middle domain LH59_07385 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LH59_07385 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LH59_07390 PF00578 AhpC/TSA family LH59_07390 PF10417 C-terminal domain of 1-Cys peroxiredoxin LH59_07400 PF00528 Binding-protein-dependent transport system inner membrane component LH59_07405 PF00528 Binding-protein-dependent transport system inner membrane component LH59_07410 PF17850 CysA C-terminal regulatory domain LH59_07410 PF12857 TOBE-like domain LH59_07410 PF00005 ABC transporter LH59_07415 PF01507 Phosphoadenosine phosphosulfate reductase family LH59_07420 PF01507 Phosphoadenosine phosphosulfate reductase family LH59_07425 PF00009 Elongation factor Tu GTP binding domain LH59_07430 PF04055 Radical SAM superfamily LH59_07445 PF01245 Ribosomal protein L19 LH59_07450 PF00293 NUDIX domain LH59_07455 PF03193 RsgA GTPase LH59_07460 PF01435 Peptidase family M48 LH59_07465 PF00929 Exonuclease LH59_07470 PF03853 YjeF-related protein N-terminus LH59_07475 PF08223 PaaX-like protein C-terminal domain LH59_07475 PF07848 PaaX-like protein LH59_07480 PF05138 Phenylacetic acid catabolic protein LH59_07485 PF06243 Phenylacetic acid degradation B LH59_07490 PF05138 Phenylacetic acid catabolic protein LH59_07495 PF01883 Iron-sulfur cluster assembly protein LH59_07500 PF00970 Oxidoreductase FAD-binding domain LH59_07500 PF00111 2Fe-2S iron-sulfur cluster binding domain LH59_07500 PF00175 Oxidoreductase NAD-binding domain LH59_07505 PF00171 Aldehyde dehydrogenase family LH59_07510 PF00378 Enoyl-CoA hydratase/isomerase LH59_07515 PF03061 Thioesterase superfamily LH59_07525 PF01554 MatE LH59_07535 PF01197 Ribosomal protein L31 LH59_07540 PF03301 Tryptophan 2,3-dioxygenase LH59_07545 PF04199 Putative cyclase LH59_07550 PF04002 RadC-like JAB domain LH59_07560 PF02401 LytB protein LH59_07565 PF14497 Glutathione S-transferase, C-terminal domain LH59_07565 PF02798 Glutathione S-transferase, N-terminal domain LH59_07570 PF13180 PDZ domain LH59_07570 PF17820 PDZ domain LH59_07575 PF08521 Two-component sensor kinase N-terminal LH59_07575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LH59_07575 PF00512 His Kinase A (phospho-acceptor) domain LH59_07580 PF00486 Transcriptional regulatory protein, C terminal LH59_07580 PF00072 Response regulator receiver domain LH59_07595 PF07683 Cobalamin synthesis protein cobW C-terminal domain LH59_07595 PF02492 CobW/HypB/UreG, nucleotide-binding domain LH59_07600 PF02492 CobW/HypB/UreG, nucleotide-binding domain LH59_07600 PF07683 Cobalamin synthesis protein cobW C-terminal domain LH59_07605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_07605 PF03466 LysR substrate binding domain LH59_07615 PF04079 Segregation and condensation complex subunit ScpB LH59_07620 PF00849 RNA pseudouridylate synthase LH59_07620 PF01479 S4 domain LH59_07625 PF02576 RimP N-terminal domain LH59_07625 PF17384 RimP C-terminal SH3 domain LH59_07630 PF08529 NusA N-terminal domain LH59_07630 PF13184 NusA-like KH domain LH59_07635 PF11987 Translation-initiation factor 2 LH59_07635 PF00009 Elongation factor Tu GTP binding domain LH59_07635 PF04760 Translation initiation factor IF-2, N-terminal region LH59_07635 PF08364 Bacterial translation initiation factor IF-2 associated region LH59_07640 PF02033 Ribosome-binding factor A LH59_07645 PF01509 TruB family pseudouridylate synthase (N terminal domain) LH59_07645 PF16198 tRNA pseudouridylate synthase B C-terminal domain LH59_07660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_07660 PF03466 LysR substrate binding domain LH59_07665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_07665 PF03466 LysR substrate binding domain LH59_07670 PF03401 Tripartite tricarboxylate transporter family receptor LH59_07675 PF01546 Peptidase family M20/M25/M40 LH59_07680 PF03641 Possible lysine decarboxylase LH59_07685 PF01612 3'-5' exonuclease LH59_07685 PF00476 DNA polymerase family A LH59_07685 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LH59_07685 PF01367 5'-3' exonuclease, C-terminal SAM fold LH59_07695 PF01738 Dienelactone hydrolase family LH59_07705 PF02690 Na+/Pi-cotransporter LH59_07710 PF03315 Serine dehydratase beta chain LH59_07710 PF03313 Serine dehydratase alpha chain LH59_07715 PF01435 Peptidase family M48 LH59_07725 PF00581 Rhodanese-like domain LH59_07735 PF03466 LysR substrate binding domain LH59_07735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_07740 PF08402 TOBE domain LH59_07740 PF00005 ABC transporter LH59_07750 PF13419 Haloacid dehalogenase-like hydrolase LH59_07760 PF01266 FAD dependent oxidoreductase LH59_07775 PF03401 Tripartite tricarboxylate transporter family receptor LH59_07785 PF02609 Exonuclease VII small subunit LH59_07790 PF00348 Polyprenyl synthetase LH59_07795 PF02779 Transketolase, pyrimidine binding domain LH59_07795 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LH59_07795 PF02780 Transketolase, C-terminal domain LH59_07800 PF02649 Type I GTP cyclohydrolase folE2 LH59_07805 PF05675 Protein of unknown function (DUF817) LH59_07810 PF01250 Ribosomal protein S6 LH59_07820 PF01084 Ribosomal protein S18 LH59_07825 PF03948 Ribosomal protein L9, C-terminal domain LH59_07825 PF01281 Ribosomal protein L9, N-terminal domain LH59_07835 PF00772 DnaB-like helicase N terminal domain LH59_07835 PF03796 DnaB-like helicase C terminal domain LH59_07840 PF13593 SBF-like CPA transporter family (DUF4137) LH59_07845 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LH59_07855 PF13404 AsnC-type helix-turn-helix domain LH59_07855 PF01037 Lrp/AsnC ligand binding domain LH59_07880 PF00155 Aminotransferase class I and II LH59_07880 PF00392 Bacterial regulatory proteins, gntR family LH59_07930 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LH59_07930 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LH59_07935 PF00990 Diguanylate cyclase, GGDEF domain LH59_07940 PF04381 Putative exonuclease, RdgC LH59_07950 PF08946 Osmosensory transporter coiled coil LH59_07950 PF00083 Sugar (and other) transporter LH59_07955 PF08521 Two-component sensor kinase N-terminal LH59_07955 PF00512 His Kinase A (phospho-acceptor) domain LH59_07955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LH59_07960 PF00072 Response regulator receiver domain LH59_07960 PF00486 Transcriptional regulatory protein, C terminal LH59_07965 PF00154 recA bacterial DNA recombination protein LH59_07970 PF02631 RecX family LH59_07975 PF03466 LysR substrate binding domain LH59_07975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_07980 PF08267 Cobalamin-independent synthase, N-terminal domain LH59_07980 PF01717 Cobalamin-independent synthase, Catalytic domain LH59_07985 PF00501 AMP-binding enzyme LH59_07985 PF13193 AMP-binding enzyme C-terminal domain LH59_07985 PF00668 Condensation domain LH59_07985 PF00975 Thioesterase domain LH59_07985 PF00550 Phosphopantetheine attachment site LH59_07995 PF00549 CoA-ligase LH59_07995 PF08442 ATP-grasp domain LH59_08000 PF00549 CoA-ligase LH59_08000 PF02629 CoA binding domain LH59_08005 PF03741 Integral membrane protein TerC family LH59_08010 PF03741 Integral membrane protein TerC family LH59_08020 PF03900 Porphobilinogen deaminase, C-terminal domain LH59_08020 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LH59_08040 PF00719 Inorganic pyrophosphatase LH59_08070 PF00005 ABC transporter LH59_08070 PF12399 Branched-chain amino acid ATP-binding cassette transporter LH59_08075 PF00005 ABC transporter LH59_08080 PF02653 Branched-chain amino acid transport system / permease component LH59_08090 PF01557 Fumarylacetoacetate (FAA) hydrolase family LH59_08100 PF02562 PhoH-like protein LH59_08100 PF13638 PIN domain LH59_08105 PF00578 AhpC/TSA family LH59_08115 PF00155 Aminotransferase class I and II LH59_08120 PF01842 ACT domain LH59_08120 PF00742 Homoserine dehydrogenase LH59_08120 PF03447 Homoserine dehydrogenase, NAD binding domain LH59_08125 PF14821 Threonine synthase N terminus LH59_08125 PF00291 Pyridoxal-phosphate dependent enzyme LH59_08135 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain LH59_08140 PF01433 Peptidase family M1 domain LH59_08140 PF11940 Domain of unknown function (DUF3458) Ig-like fold LH59_08140 PF17432 Domain of unknown function (DUF3458_C) ARM repeats LH59_08150 PF00816 H-NS histone family LH59_08155 PF01523 Putative modulator of DNA gyrase LH59_08160 PF00793 DAHP synthetase I family LH59_08165 PF01565 FAD binding domain LH59_08165 PF02913 FAD linked oxidases, C-terminal domain LH59_08170 PF02913 FAD linked oxidases, C-terminal domain LH59_08170 PF01565 FAD binding domain LH59_08175 PF01565 FAD binding domain LH59_08180 PF13183 4Fe-4S dicluster domain LH59_08180 PF02754 Cysteine-rich domain LH59_08185 PF02233 NAD(P) transhydrogenase beta subunit LH59_08190 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch LH59_08195 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LH59_08195 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LH59_08205 PF03401 Tripartite tricarboxylate transporter family receptor LH59_08210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_08210 PF03466 LysR substrate binding domain LH59_08220 PF01925 Sulfite exporter TauE/SafE LH59_08225 PF13417 Glutathione S-transferase, N-terminal domain LH59_08225 PF00043 Glutathione S-transferase, C-terminal domain LH59_08230 PF08328 Adenylosuccinate lyase C-terminal LH59_08230 PF00206 Lyase LH59_08235 PF01322 Cytochrome C' LH59_08275 PF13687 Domain of unknown function (DUF4153) LH59_08365 PF00589 Phage integrase family LH59_08385 PF00990 Diguanylate cyclase, GGDEF domain LH59_08385 PF03707 Bacterial signalling protein N terminal repeat LH59_08385 PF00563 EAL domain LH59_08395 PF00892 EamA-like transporter family LH59_08430 PF10017 Histidine-specific methyltransferase, SAM-dependent LH59_08440 PF13091 PLD-like domain LH59_08440 PF13396 Phospholipase_D-nuclease N-terminal LH59_08445 PF01645 Conserved region in glutamate synthase LH59_08450 PF04143 Sulphur transport LH59_08455 PF03547 Membrane transport protein LH59_08465 PF13673 Acetyltransferase (GNAT) domain LH59_08485 PF00575 S1 RNA binding domain LH59_08485 PF17876 Cold shock domain LH59_08485 PF08206 Ribonuclease B OB domain LH59_08485 PF00773 RNB domain LH59_08485 PF08461 Ribonuclease R winged-helix domain LH59_08490 PF08032 RNA 2'-O ribose methyltransferase substrate binding LH59_08490 PF00588 SpoU rRNA Methylase family LH59_08495 PF01053 Cys/Met metabolism PLP-dependent enzyme LH59_08500 PF18331 PKHD-type hydroxylase C-terminal domain LH59_08500 PF13640 2OG-Fe(II) oxygenase superfamily LH59_08505 PF00216 Bacterial DNA-binding protein LH59_08520 PF01618 MotA/TolQ/ExbB proton channel family LH59_08525 PF02472 Biopolymer transport protein ExbD/TolR LH59_08530 PF00486 Transcriptional regulatory protein, C terminal LH59_08530 PF00072 Response regulator receiver domain LH59_08535 PF00512 His Kinase A (phospho-acceptor) domain LH59_08535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LH59_08535 PF08521 Two-component sensor kinase N-terminal LH59_08540 PF02705 K+ potassium transporter LH59_08545 PF00764 Arginosuccinate synthase LH59_08560 PF04909 Amidohydrolase LH59_08580 PF12697 Alpha/beta hydrolase family LH59_08585 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LH59_08585 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LH59_08590 PF00202 Aminotransferase class-III LH59_08600 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LH59_08610 PF03480 Bacterial extracellular solute-binding protein, family 7 LH59_08630 PF13416 Bacterial extracellular solute-binding protein LH59_08635 PF00005 ABC transporter LH59_08635 PF08402 TOBE domain LH59_08640 PF00528 Binding-protein-dependent transport system inner membrane component LH59_08645 PF00528 Binding-protein-dependent transport system inner membrane component LH59_08655 PF02245 Methylpurine-DNA glycosylase (MPG) LH59_08665 PF02646 RmuC family LH59_08670 PF01425 Amidase LH59_08675 PF18158 Adaptive response protein AidB N-terminal domain LH59_08675 PF02770 Acyl-CoA dehydrogenase, middle domain LH59_08675 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LH59_08680 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LH59_08685 PF01895 PhoU domain LH59_08695 PF04362 Bacterial Fe(2+) trafficking LH59_08700 PF00696 Amino acid kinase family LH59_08700 PF00583 Acetyltransferase (GNAT) family LH59_08705 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LH59_08705 PF00271 Helicase conserved C-terminal domain LH59_08705 PF04408 Helicase associated domain (HA2) LH59_08705 PF11898 Domain of unknown function (DUF3418) LH59_08705 PF00270 DEAD/DEAH box helicase LH59_08710 PF00528 Binding-protein-dependent transport system inner membrane component LH59_08715 PF00005 ABC transporter LH59_08725 PF02811 PHP domain LH59_08725 PF01336 OB-fold nucleic acid binding domain LH59_08725 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LH59_08725 PF07733 Bacterial DNA polymerase III alpha NTPase domain LH59_08725 PF14579 Helix-hairpin-helix motif LH59_08730 PF00534 Glycosyl transferases group 1 LH59_08735 PF01522 Polysaccharide deacetylase LH59_08740 PF00535 Glycosyl transferase family 2 LH59_08745 PF13439 Glycosyltransferase Family 4 LH59_08745 PF00534 Glycosyl transferases group 1 LH59_08750 PF01522 Polysaccharide deacetylase LH59_08760 PF03692 Putative zinc- or iron-chelating domain LH59_08775 PF00664 ABC transporter transmembrane region LH59_08775 PF00005 ABC transporter LH59_08780 PF02254 TrkA-N domain LH59_08780 PF00999 Sodium/hydrogen exchanger family LH59_08790 PF00563 EAL domain LH59_08790 PF01590 GAF domain LH59_08790 PF00360 Phytochrome region LH59_08790 PF00990 Diguanylate cyclase, GGDEF domain LH59_08795 PF11254 Protein of unknown function (DUF3053) LH59_08800 PF10150 Ribonuclease E/G family LH59_08800 PF00575 S1 RNA binding domain LH59_08830 PF00158 Sigma-54 interaction domain LH59_08830 PF00072 Response regulator receiver domain LH59_08830 PF02954 Bacterial regulatory protein, Fis family LH59_08835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LH59_08835 PF02743 Cache domain LH59_08835 PF00512 His Kinase A (phospho-acceptor) domain LH59_08840 PF00375 Sodium:dicarboxylate symporter family LH59_08845 PF02545 Maf-like protein LH59_08850 PF02590 Predicted SPOUT methyltransferase LH59_08860 PF01467 Cytidylyltransferase-like LH59_08865 PF01218 Coproporphyrinogen III oxidase LH59_08870 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LH59_08870 PF02844 Phosphoribosylglycinamide synthetase, N domain LH59_08870 PF02843 Phosphoribosylglycinamide synthetase, C domain LH59_08875 PF01709 Transcriptional regulator LH59_08880 PF05872 Bacterial protein of unknown function (DUF853) LH59_08885 PF00180 Isocitrate/isopropylmalate dehydrogenase LH59_08895 PF07690 Major Facilitator Superfamily LH59_08900 PF00529 HlyD membrane-fusion protein of T1SS LH59_08900 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LH59_08905 PF02321 Outer membrane efflux protein LH59_08910 PF01047 MarR family LH59_08925 PF08240 Alcohol dehydrogenase GroES-like domain LH59_08925 PF00107 Zinc-binding dehydrogenase LH59_08930 PF00171 Aldehyde dehydrogenase family LH59_08940 PF06433 Methylamine dehydrogenase heavy chain (MADH) LH59_08950 PF00578 AhpC/TSA family LH59_08970 PF02677 Epoxyqueuosine reductase QueH LH59_08975 PF03710 Glutamate-ammonia ligase adenylyltransferase LH59_08975 PF08335 GlnD PII-uridylyltransferase LH59_08985 PF07497 Rho termination factor, RNA-binding domain LH59_08985 PF07498 Rho termination factor, N-terminal domain LH59_08985 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LH59_08990 PF00085 Thioredoxin LH59_08995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LH59_08995 PF01751 Toprim domain LH59_08995 PF00986 DNA gyrase B subunit, carboxyl terminus LH59_08995 PF00204 DNA gyrase B LH59_09005 PF00521 DNA gyrase/topoisomerase IV, subunit A LH59_09010 PF00440 Bacterial regulatory proteins, tetR family LH59_09010 PF08359 YsiA-like protein, C-terminal region LH59_09015 PF04235 Protein of unknown function (DUF418) LH59_09020 PF00202 Aminotransferase class-III LH59_09030 PF12802 MarR family LH59_09035 PF00583 Acetyltransferase (GNAT) family LH59_09040 PF00202 Aminotransferase class-III LH59_09045 PF06339 Ectoine synthase LH59_09050 PF05721 Phytanoyl-CoA dioxygenase (PhyH) LH59_09055 PF00111 2Fe-2S iron-sulfur cluster binding domain LH59_09055 PF03473 MOSC domain LH59_09055 PF03476 MOSC N-terminal beta barrel domain LH59_09060 PF00893 Small Multidrug Resistance protein LH59_09065 PF02261 Aspartate decarboxylase LH59_09070 PF00175 Oxidoreductase NAD-binding domain LH59_09070 PF00970 Oxidoreductase FAD-binding domain LH59_09070 PF00111 2Fe-2S iron-sulfur cluster binding domain LH59_09075 PF01266 FAD dependent oxidoreductase LH59_09080 PF13416 Bacterial extracellular solute-binding protein LH59_09090 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LH59_09090 PF02272 DHHA1 domain LH59_09090 PF01411 tRNA synthetases class II (A) LH59_09095 PF01206 Sulfurtransferase TusA LH59_09105 PF00886 Ribosomal protein S16 LH59_09110 PF01782 RimM N-terminal domain LH59_09115 PF01746 tRNA (Guanine-1)-methyltransferase LH59_09125 PF00497 Bacterial extracellular solute-binding proteins, family 3 LH59_09130 PF00528 Binding-protein-dependent transport system inner membrane component LH59_09140 PF01266 FAD dependent oxidoreductase LH59_09145 PF10458 Valyl tRNA synthetase tRNA binding arm LH59_09145 PF00133 tRNA synthetases class I (I, L, M and V) LH59_09145 PF08264 Anticodon-binding domain of tRNA LH59_09150 PF00334 Nucleoside diphosphate kinase LH59_09155 PF04055 Radical SAM superfamily LH59_09165 PF04551 GcpE protein LH59_09170 PF13393 Histidyl-tRNA synthetase LH59_09170 PF03129 Anticodon binding domain LH59_09175 PF09976 Tetratricopeptide repeat-like domain LH59_09180 PF13360 PQQ-like domain LH59_09185 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LH59_09185 PF01926 50S ribosome-binding GTPase LH59_09190 PF00155 Aminotransferase class I and II LH59_09195 PF17209 Hfq protein LH59_09200 PF13167 GTP-binding GTPase N-terminal LH59_09200 PF16360 GTP-binding GTPase Middle Region LH59_09200 PF01926 50S ribosome-binding GTPase LH59_09205 PF12221 Bacterial membrane protein N terminal LH59_09205 PF01145 SPFH domain / Band 7 family LH59_09210 PF01145 SPFH domain / Band 7 family LH59_09215 PF13393 Histidyl-tRNA synthetase LH59_09225 PF00156 Phosphoribosyl transferase domain LH59_09230 PF01165 Ribosomal protein S21 LH59_09235 PF08275 DNA primase catalytic core, N-terminal domain LH59_09235 PF08278 DNA primase DnaG DnaB-binding LH59_09235 PF10410 DnaB-helicase binding domain of primase LH59_09235 PF01807 CHC2 zinc finger LH59_09240 PF03979 Sigma-70 factor, region 1.1 LH59_09240 PF00140 Sigma-70 factor, region 1.2 LH59_09240 PF04546 Sigma-70, non-essential region LH59_09240 PF04545 Sigma-70, region 4 LH59_09240 PF04539 Sigma-70 region 3 LH59_09240 PF04542 Sigma-70 region 2 LH59_09250 PF13439 Glycosyltransferase Family 4 LH59_09250 PF00534 Glycosyl transferases group 1 LH59_09260 PF01757 Acyltransferase family LH59_09290 PF04972 BON domain LH59_09290 PF00263 Bacterial type II and III secretion system protein LH59_09290 PF13629 Pilus formation protein N terminal region LH59_09295 PF00437 Type II/IV secretion system protein LH59_09315 PF01636 Phosphotransferase enzyme family LH59_09320 PF01207 Dihydrouridine synthase (Dus) LH59_09330 PF03631 Virulence factor BrkB LH59_09340 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LH59_09345 PF00486 Transcriptional regulatory protein, C terminal LH59_09345 PF00072 Response regulator receiver domain LH59_09350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LH59_09350 PF00512 His Kinase A (phospho-acceptor) domain LH59_09360 PF03707 Bacterial signalling protein N terminal repeat LH59_09360 PF00990 Diguanylate cyclase, GGDEF domain LH59_09360 PF00563 EAL domain LH59_09365 PF01264 Chorismate synthase LH59_09370 PF01435 Peptidase family M48 LH59_09395 PF00072 Response regulator receiver domain LH59_09395 PF00196 Bacterial regulatory proteins, luxR family LH59_09400 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LH59_09400 PF00529 HlyD membrane-fusion protein of T1SS LH59_09405 PF00005 ABC transporter LH59_09405 PF03412 Peptidase C39 family LH59_09405 PF00664 ABC transporter transmembrane region LH59_09415 PF02321 Outer membrane efflux protein LH59_09420 PF00330 Aconitase family (aconitate hydratase) LH59_09425 PF00694 Aconitase C-terminal domain LH59_09430 PF00180 Isocitrate/isopropylmalate dehydrogenase LH59_09435 PF02774 Semialdehyde dehydrogenase, dimerisation domain LH59_09435 PF01118 Semialdehyde dehydrogenase, NAD binding domain LH59_09445 PF01416 tRNA pseudouridine synthase LH59_09450 PF03480 Bacterial extracellular solute-binding protein, family 7 LH59_09455 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LH59_09470 PF00561 alpha/beta hydrolase fold LH59_09490 PF01966 HD domain LH59_09505 PF00920 Dehydratase family LH59_09510 PF03480 Bacterial extracellular solute-binding protein, family 7 LH59_09515 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LH59_09520 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component LH59_09525 PF00356 Bacterial regulatory proteins, lacI family LH59_09525 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LH59_09530 PF00892 EamA-like transporter family LH59_09535 PF00850 Histone deacetylase domain LH59_09540 PF07883 Cupin domain LH59_09545 PF00005 ABC transporter LH59_09545 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LH59_09550 PF00528 Binding-protein-dependent transport system inner membrane component LH59_09550 PF12911 N-terminal TM domain of oligopeptide transport permease C LH59_09555 PF00528 Binding-protein-dependent transport system inner membrane component LH59_09560 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LH59_09565 PF00171 Aldehyde dehydrogenase family LH59_09570 PF07687 Peptidase dimerisation domain LH59_09570 PF01546 Peptidase family M20/M25/M40 LH59_09575 PF00205 Thiamine pyrophosphate enzyme, central domain LH59_09575 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LH59_09575 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LH59_09580 PF07729 FCD domain LH59_09580 PF00392 Bacterial regulatory proteins, gntR family LH59_09595 PF04055 Radical SAM superfamily LH59_09595 PF06969 HemN C-terminal domain LH59_09600 PF00196 Bacterial regulatory proteins, luxR family LH59_09600 PF00072 Response regulator receiver domain LH59_09605 PF04321 RmlD substrate binding domain LH59_09610 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LH59_09610 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LH59_09610 PF03129 Anticodon binding domain LH59_09610 PF02824 TGS domain LH59_09615 PF05198 Translation initiation factor IF-3, N-terminal domain LH59_09615 PF00707 Translation initiation factor IF-3, C-terminal domain LH59_09620 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain LH59_09620 PF02951 Prokaryotic glutathione synthetase, N-terminal domain LH59_09630 PF00381 PTS HPr component phosphorylation site LH59_09635 PF00391 PEP-utilising enzyme, mobile domain LH59_09635 PF02896 PEP-utilising enzyme, TIM barrel domain LH59_09635 PF05524 PEP-utilising enzyme, N-terminal LH59_09640 PF00909 Ammonium Transporter Family LH59_09645 PF00543 Nitrogen regulatory protein P-II LH59_09655 PF04380 Membrane fusogenic activity LH59_09670 PF01632 Ribosomal protein L35 LH59_09675 PF00453 Ribosomal protein L20 LH59_09680 PF01409 tRNA synthetases class II core domain (F) LH59_09680 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LH59_09685 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LH59_09685 PF01588 Putative tRNA binding domain LH59_09685 PF03483 B3/4 domain LH59_09685 PF03484 tRNA synthetase B5 domain LH59_09685 PF03147 Ferredoxin-fold anticodon binding domain LH59_09690 PF00216 Bacterial DNA-binding protein LH59_09740 PF02567 Phenazine biosynthesis-like protein LH59_09745 PF00583 Acetyltransferase (GNAT) family LH59_09755 PF03401 Tripartite tricarboxylate transporter family receptor LH59_09780 PF01037 Lrp/AsnC ligand binding domain LH59_09810 PF03466 LysR substrate binding domain LH59_09810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_09815 PF03401 Tripartite tricarboxylate transporter family receptor LH59_09830 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LH59_09830 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LH59_09830 PF02142 MGS-like domain LH59_09840 PF00005 ABC transporter LH59_09855 PF03466 LysR substrate binding domain LH59_09855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_09860 PF13593 SBF-like CPA transporter family (DUF4137) LH59_09870 PF00664 ABC transporter transmembrane region LH59_09870 PF00005 ABC transporter LH59_09875 PF00248 Aldo/keto reductase family LH59_09890 PF00149 Calcineurin-like phosphoesterase LH59_09895 PF00912 Transglycosylase LH59_09895 PF17092 Penicillin-binding protein OB-like domain LH59_09895 PF00905 Penicillin binding protein transpeptidase domain LH59_09900 PF02311 AraC-like ligand binding domain LH59_09900 PF12833 Helix-turn-helix domain LH59_09905 PF07690 Major Facilitator Superfamily LH59_09915 PF00535 Glycosyl transferase family 2 LH59_09920 PF14883 Hypothetical glycosyl hydrolase family 13 LH59_09920 PF01522 Polysaccharide deacetylase LH59_09935 PF05230 MASE2 domain LH59_09935 PF00990 Diguanylate cyclase, GGDEF domain LH59_09940 PF00326 Prolyl oligopeptidase family LH59_09955 PF00817 impB/mucB/samB family LH59_09955 PF11798 IMS family HHH motif LH59_09955 PF11799 impB/mucB/samB family C-terminal domain LH59_09960 PF09424 Yqey-like protein LH59_09965 PF02801 Beta-ketoacyl synthase, C-terminal domain LH59_09965 PF00109 Beta-ketoacyl synthase, N-terminal domain LH59_09980 PF00109 Beta-ketoacyl synthase, N-terminal domain LH59_09980 PF02801 Beta-ketoacyl synthase, C-terminal domain LH59_10010 PF07977 FabA-like domain LH59_10020 PF00550 Phosphopantetheine attachment site LH59_10025 PF00550 Phosphopantetheine attachment site LH59_10045 PF00175 Oxidoreductase NAD-binding domain LH59_10045 PF00042 Globin LH59_10045 PF00970 Oxidoreductase FAD-binding domain LH59_10050 PF02082 Transcriptional regulator LH59_10055 PF01266 FAD dependent oxidoreductase LH59_10060 PF00892 EamA-like transporter family LH59_10065 PF01619 Proline dehydrogenase LH59_10085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_10085 PF03466 LysR substrate binding domain LH59_10090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_10090 PF03466 LysR substrate binding domain LH59_10095 PF02798 Glutathione S-transferase, N-terminal domain LH59_10105 PF01638 HxlR-like helix-turn-helix LH59_10115 PF00005 ABC transporter LH59_10120 PF00528 Binding-protein-dependent transport system inner membrane component LH59_10130 PF12806 Acetyl-CoA dehydrogenase C-terminal like LH59_10130 PF02770 Acyl-CoA dehydrogenase, middle domain LH59_10130 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LH59_10130 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LH59_10135 PF13193 AMP-binding enzyme C-terminal domain LH59_10135 PF00501 AMP-binding enzyme LH59_10145 PF01177 Asp/Glu/Hydantoin racemase LH59_10155 PF00115 Cytochrome C and Quinol oxidase polypeptide I LH59_10170 PF07732 Multicopper oxidase LH59_10170 PF00394 Multicopper oxidase LH59_10175 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LH59_10180 PF00456 Transketolase, thiamine diphosphate binding domain LH59_10180 PF17831 Pyruvate dehydrogenase E1 component middle domain LH59_10185 PF07992 Pyridine nucleotide-disulphide oxidoreductase LH59_10185 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LH59_10195 PF01810 LysE type translocator LH59_10200 PF00155 Aminotransferase class I and II LH59_10200 PF00392 Bacterial regulatory proteins, gntR family LH59_10210 PF00892 EamA-like transporter family LH59_10215 PF00892 EamA-like transporter family LH59_10230 PF01554 MatE LH59_10235 PF00378 Enoyl-CoA hydratase/isomerase LH59_10250 PF13193 AMP-binding enzyme C-terminal domain LH59_10250 PF00501 AMP-binding enzyme LH59_10255 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain LH59_10255 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain LH59_10270 PF17885 Styrene monooxygenase A putative substrate binding domain LH59_10275 PF01613 Flavin reductase like domain LH59_10280 PF03275 UDP-galactopyranose mutase LH59_10300 PF12833 Helix-turn-helix domain LH59_10305 PF00145 C-5 cytosine-specific DNA methylase LH59_10305 PF01381 Helix-turn-helix LH59_10315 PF00106 short chain dehydrogenase LH59_10320 PF03401 Tripartite tricarboxylate transporter family receptor LH59_10325 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LH59_10325 PF01842 ACT domain LH59_10325 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LH59_10330 PF03737 Aldolase/RraA LH59_10340 PF01070 FMN-dependent dehydrogenase LH59_10355 PF07660 Secretin and TonB N terminus short domain LH59_10355 PF07715 TonB-dependent Receptor Plug Domain LH59_10355 PF00593 TonB dependent receptor LH59_10360 PF16220 Domain of unknown function (DUF4880) LH59_10360 PF04773 FecR protein LH59_10365 PF08281 Sigma-70, region 4 LH59_10365 PF04542 Sigma-70 region 2 LH59_10385 PF05726 Pirin C-terminal cupin domain LH59_10385 PF02678 Pirin LH59_10400 PF03918 Cytochrome C biogenesis protein LH59_10415 PF03100 CcmE LH59_10425 PF01578 Cytochrome C assembly protein LH59_10430 PF03379 CcmB protein LH59_10435 PF00005 ABC transporter LH59_10445 PF03264 NapC/NirT cytochrome c family, N-terminal region LH59_10450 PF00384 Molybdopterin oxidoreductase LH59_10450 PF18364 Molybdopterin oxidoreductase N-terminal domain LH59_10450 PF01568 Molydopterin dinucleotide binding domain LH59_10460 PF13247 4Fe-4S dicluster domain LH59_10465 PF03916 Polysulphide reductase, NrfD LH59_10470 PF00384 Molybdopterin oxidoreductase LH59_10470 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LH59_10470 PF01568 Molydopterin dinucleotide binding domain LH59_10480 PF03918 Cytochrome C biogenesis protein LH59_10485 PF08534 Redoxin LH59_10490 PF01578 Cytochrome C assembly protein LH59_10490 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal LH59_10495 PF03100 CcmE LH59_10505 PF01578 Cytochrome C assembly protein LH59_10510 PF03379 CcmB protein LH59_10515 PF00005 ABC transporter LH59_10520 PF03264 NapC/NirT cytochrome c family, N-terminal region LH59_10525 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) LH59_10530 PF00384 Molybdopterin oxidoreductase LH59_10530 PF01568 Molydopterin dinucleotide binding domain LH59_10530 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LH59_10545 PF05853 beta-keto acid cleavage enzyme LH59_10550 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LH59_10550 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LH59_10550 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain LH59_10555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_10555 PF03466 LysR substrate binding domain LH59_10565 PF00920 Dehydratase family LH59_10570 PF03401 Tripartite tricarboxylate transporter family receptor LH59_10575 PF00990 Diguanylate cyclase, GGDEF domain LH59_10575 PF13426 PAS domain LH59_10575 PF00563 EAL domain LH59_10580 PF00378 Enoyl-CoA hydratase/isomerase LH59_10585 PF07715 TonB-dependent Receptor Plug Domain LH59_10585 PF00593 TonB dependent receptor LH59_10600 PF03401 Tripartite tricarboxylate transporter family receptor LH59_10605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_10605 PF03466 LysR substrate binding domain LH59_10610 PF02515 CoA-transferase family III LH59_10615 PF00378 Enoyl-CoA hydratase/isomerase LH59_10620 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family LH59_10630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_10630 PF03466 LysR substrate binding domain LH59_10640 PF07715 TonB-dependent Receptor Plug Domain LH59_10640 PF07660 Secretin and TonB N terminus short domain LH59_10640 PF00593 TonB dependent receptor LH59_10650 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase LH59_10655 PF09297 NADH pyrophosphatase zinc ribbon domain LH59_10655 PF00293 NUDIX domain LH59_10665 PF07690 Major Facilitator Superfamily LH59_10675 PF00596 Class II Aldolase and Adducin N-terminal domain LH59_10685 PF01323 DSBA-like thioredoxin domain LH59_10700 PF13193 AMP-binding enzyme C-terminal domain LH59_10700 PF00501 AMP-binding enzyme LH59_10710 PF03401 Tripartite tricarboxylate transporter family receptor LH59_10725 PF01965 DJ-1/PfpI family LH59_10730 PF01965 DJ-1/PfpI family LH59_10735 PF01037 Lrp/AsnC ligand binding domain LH59_10740 PF01810 LysE type translocator LH59_10745 PF00005 ABC transporter LH59_10745 PF00664 ABC transporter transmembrane region LH59_10750 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LH59_10755 PF03480 Bacterial extracellular solute-binding protein, family 7 LH59_10770 PF13193 AMP-binding enzyme C-terminal domain LH59_10770 PF00501 AMP-binding enzyme LH59_10800 PF01804 Penicillin amidase LH59_10805 PF00005 ABC transporter LH59_10805 PF00664 ABC transporter transmembrane region LH59_10810 PF03466 LysR substrate binding domain LH59_10810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_10815 PF16350 FAD dependent oxidoreductase central domain LH59_10815 PF08669 Glycine cleavage T-protein C-terminal barrel domain LH59_10815 PF01571 Aminomethyltransferase folate-binding domain LH59_10815 PF01266 FAD dependent oxidoreductase LH59_10820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_10820 PF03466 LysR substrate binding domain LH59_10830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_10830 PF03466 LysR substrate binding domain LH59_10835 PF07690 Major Facilitator Superfamily LH59_10840 PF07690 Major Facilitator Superfamily LH59_10845 PF08361 MAATS-type transcriptional repressor, C-terminal region LH59_10845 PF00440 Bacterial regulatory proteins, tetR family LH59_10855 PF08241 Methyltransferase domain LH59_10860 PF00356 Bacterial regulatory proteins, lacI family LH59_10865 PF07690 Major Facilitator Superfamily LH59_10870 PF01425 Amidase LH59_10880 PF01914 MarC family integral membrane protein LH59_10915 PF00392 Bacterial regulatory proteins, gntR family LH59_10915 PF07729 FCD domain LH59_10920 PF00171 Aldehyde dehydrogenase family LH59_10925 PF00677 Lumazine binding domain LH59_10935 PF07690 Major Facilitator Superfamily LH59_10940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_10940 PF03466 LysR substrate binding domain LH59_10945 PF13302 Acetyltransferase (GNAT) domain LH59_10950 PF00403 Heavy-metal-associated domain LH59_10955 PF13411 MerR HTH family regulatory protein LH59_10980 PF00593 TonB dependent receptor LH59_10980 PF07715 TonB-dependent Receptor Plug Domain LH59_10990 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal LH59_10990 PF00676 Dehydrogenase E1 component LH59_10995 PF02780 Transketolase, C-terminal domain LH59_10995 PF02779 Transketolase, pyrimidine binding domain LH59_11005 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LH59_11005 PF07992 Pyridine nucleotide-disulphide oxidoreductase LH59_11015 PF00206 Lyase LH59_11015 PF14698 Argininosuccinate lyase C-terminal LH59_11020 PF00924 Mechanosensitive ion channel LH59_11025 PF00795 Carbon-nitrogen hydrolase LH59_11025 PF02540 NAD synthase LH59_11030 PF00543 Nitrogen regulatory protein P-II LH59_11035 PF00482 Type II secretion system (T2SS), protein F LH59_11040 PF03958 Bacterial type II/III secretion system short domain LH59_11040 PF00263 Bacterial type II and III secretion system protein LH59_11045 PF00437 Type II/IV secretion system protein LH59_11060 PF01203 Type II secretion system (T2SS), protein N LH59_11075 PF03934 Type II secretion system (T2SS), protein K LH59_11080 PF11612 Type II secretion system (T2SS), protein J LH59_11080 PF07963 Prokaryotic N-terminal methylation motif LH59_11085 PF02501 Type II secretion system (T2SS), protein I LH59_11085 PF07963 Prokaryotic N-terminal methylation motif LH59_11090 PF12019 Type II transport protein GspH LH59_11090 PF07963 Prokaryotic N-terminal methylation motif LH59_11095 PF08334 Type II secretion system (T2SS), protein G LH59_11095 PF07963 Prokaryotic N-terminal methylation motif LH59_11125 PF05506 Domain of unknown function (DUF756) LH59_11125 PF04185 Phosphoesterase family LH59_11130 PF03466 LysR substrate binding domain LH59_11130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_11140 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LH59_11145 PF00528 Binding-protein-dependent transport system inner membrane component LH59_11155 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LH59_11155 PF00005 ABC transporter LH59_11160 PF07152 YaeQ protein LH59_11175 PF07690 Major Facilitator Superfamily LH59_11180 PF04345 Chorismate lyase LH59_11185 PF00849 RNA pseudouridylate synthase LH59_11185 PF01479 S4 domain LH59_11190 PF03466 LysR substrate binding domain LH59_11190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_11195 PF00529 HlyD membrane-fusion protein of T1SS LH59_11195 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LH59_11200 PF00873 AcrB/AcrD/AcrF family LH59_11205 PF02321 Outer membrane efflux protein LH59_11210 PF04226 Transglycosylase associated protein LH59_11215 PF02630 SCO1/SenC LH59_11225 PF01432 Peptidase family M3 LH59_11230 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LH59_11230 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LH59_11235 PF00072 Response regulator receiver domain LH59_11235 PF00196 Bacterial regulatory proteins, luxR family LH59_11240 PF00512 His Kinase A (phospho-acceptor) domain LH59_11240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LH59_11240 PF00989 PAS fold LH59_11245 PF00456 Transketolase, thiamine diphosphate binding domain LH59_11245 PF17831 Pyruvate dehydrogenase E1 component middle domain LH59_11250 PF02817 e3 binding domain LH59_11250 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LH59_11250 PF00364 Biotin-requiring enzyme LH59_11255 PF07992 Pyridine nucleotide-disulphide oxidoreductase LH59_11255 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LH59_11265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_11265 PF03466 LysR substrate binding domain LH59_11280 PF00700 Bacterial flagellin C-terminal helical region LH59_11280 PF08884 Flagellin D3 domain LH59_11280 PF00669 Bacterial flagellin N-terminal helical region LH59_11290 PF04542 Sigma-70 region 2 LH59_11290 PF04539 Sigma-70 region 3 LH59_11290 PF04545 Sigma-70, region 4 LH59_11295 PF05247 Flagellar transcriptional activator (FlhD) LH59_11300 PF05280 Flagellar transcriptional activator (FlhC) LH59_11305 PF01618 MotA/TolQ/ExbB proton channel family LH59_11310 PF00691 OmpA family LH59_11310 PF13677 Membrane MotB of proton-channel complex MotA/MotB LH59_11315 PF00072 Response regulator receiver domain LH59_11320 PF01627 Hpt domain LH59_11320 PF02895 Signal transducing histidine kinase, homodimeric domain LH59_11320 PF01584 CheW-like domain LH59_11320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LH59_11320 PF09078 CheY binding LH59_11325 PF01584 CheW-like domain LH59_11330 PF02203 Tar ligand binding domain homologue LH59_11330 PF00672 HAMP domain LH59_11330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LH59_11335 PF03705 CheR methyltransferase, all-alpha domain LH59_11335 PF01739 CheR methyltransferase, SAM binding domain LH59_11340 PF01339 CheB methylesterase LH59_11340 PF00072 Response regulator receiver domain LH59_11345 PF00072 Response regulator receiver domain LH59_11350 PF04344 Chemotaxis phosphatase, CheZ LH59_11355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LH59_11355 PF00672 HAMP domain LH59_11365 PF01312 FlhB HrpN YscU SpaS Family LH59_11370 PF00771 FHIPEP family LH59_11375 PF00448 SRP54-type protein, GTPase domain LH59_11385 PF04316 Anti-sigma-28 factor, FlgM LH59_11395 PF00460 Flagella basal body rod protein LH59_11400 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LH59_11400 PF00460 Flagella basal body rod protein LH59_11405 PF13861 FlgD Tudor-like domain LH59_11405 PF13860 FlgD Ig-like domain LH59_11405 PF03963 Flagellar hook capping protein - N-terminal region LH59_11410 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LH59_11410 PF00460 Flagella basal body rod protein LH59_11410 PF07559 Flagellar basal body protein FlaE LH59_11415 PF00460 Flagella basal body rod protein LH59_11415 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LH59_11420 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LH59_11420 PF00460 Flagella basal body rod protein LH59_11425 PF02107 Flagellar L-ring protein LH59_11430 PF02119 Flagellar P-ring protein LH59_11435 PF10135 Rod binding protein LH59_11435 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LH59_11440 PF00460 Flagella basal body rod protein LH59_11440 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LH59_11445 PF00669 Bacterial flagellin N-terminal helical region LH59_11450 PF00672 HAMP domain LH59_11450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LH59_11450 PF02203 Tar ligand binding domain homologue LH59_11460 PF00672 HAMP domain LH59_11460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LH59_11460 PF02203 Tar ligand binding domain homologue LH59_11465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LH59_11465 PF08447 PAS fold LH59_11470 PF01311 Bacterial export proteins, family 1 LH59_11475 PF01313 Bacterial export proteins, family 3 LH59_11480 PF00813 FliP family LH59_11485 PF04347 Flagellar biosynthesis protein, FliO LH59_11490 PF16973 Flagellar motor switch protein FliN N-terminal LH59_11490 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LH59_11495 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LH59_11495 PF02154 Flagellar motor switch protein FliM LH59_11500 PF03748 Flagellar basal body-associated protein FliL LH59_11515 PF18269 T3SS EscN ATPase C-terminal domain LH59_11515 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LH59_11525 PF14842 FliG N-terminal domain LH59_11525 PF14841 FliG middle domain LH59_11525 PF01706 FliG C-terminal domain LH59_11530 PF08345 Flagellar M-ring protein C-terminal LH59_11530 PF01514 Secretory protein of YscJ/FliF family LH59_11535 PF02049 Flagellar hook-basal body complex protein FliE LH59_11545 PF01312 FlhB HrpN YscU SpaS Family LH59_11560 PF02561 Flagellar protein FliS LH59_11565 PF07195 Flagellar hook-associated protein 2 C-terminus LH59_11565 PF02465 Flagellar hook-associated protein 2 N-terminus LH59_11570 PF03646 FlaG protein LH59_11575 PF01614 Bacterial transcriptional regulator LH59_11580 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LH59_11580 PF02770 Acyl-CoA dehydrogenase, middle domain LH59_11580 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LH59_11585 PF02515 CoA-transferase family III LH59_11590 PF03401 Tripartite tricarboxylate transporter family receptor LH59_11600 PF08245 Mur ligase middle domain LH59_11600 PF02875 Mur ligase family, glutamate ligase domain LH59_11615 PF00156 Phosphoribosyl transferase domain LH59_11620 PF01863 Protein of unknown function DUF45 LH59_11625 PF02600 Disulfide bond formation protein DsbB LH59_11635 PF08335 GlnD PII-uridylyltransferase LH59_11635 PF01966 HD domain LH59_11635 PF01909 Nucleotidyltransferase domain LH59_11640 PF00557 Metallopeptidase family M24 LH59_11645 PF00318 Ribosomal protein S2 LH59_11650 PF00889 Elongation factor TS LH59_11655 PF00696 Amino acid kinase family LH59_11660 PF01765 Ribosome recycling factor LH59_11665 PF01255 Putative undecaprenyl diphosphate synthase LH59_11675 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LH59_11675 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LH59_11675 PF13288 DXP reductoisomerase C-terminal domain LH59_11680 PF17820 PDZ domain LH59_11680 PF02163 Peptidase family M50 LH59_11685 PF07244 Surface antigen variable number repeat LH59_11685 PF01103 Surface antigen LH59_11690 PF03938 Outer membrane protein (OmpH-like) LH59_11695 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LH59_11695 PF00132 Bacterial transferase hexapeptide (six repeats) LH59_11700 PF07977 FabA-like domain LH59_11705 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LH59_11705 PF00132 Bacterial transferase hexapeptide (six repeats) LH59_11710 PF02684 Lipid-A-disaccharide synthetase LH59_11715 PF01351 Ribonuclease HII LH59_11720 PF00588 SpoU rRNA Methylase family LH59_11720 PF08032 RNA 2'-O ribose methyltransferase substrate binding LH59_11730 PF03618 Kinase/pyrophosphorylase LH59_11735 PF00391 PEP-utilising enzyme, mobile domain LH59_11735 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LH59_11735 PF02896 PEP-utilising enzyme, TIM barrel domain LH59_11745 PF00958 GMP synthase C terminal domain LH59_11745 PF00117 Glutamine amidotransferase class-I LH59_11755 PF01145 SPFH domain / Band 7 family LH59_11760 PF00990 Diguanylate cyclase, GGDEF domain LH59_11760 PF00072 Response regulator receiver domain LH59_11765 PF01668 SmpB protein LH59_11770 PF03364 Polyketide cyclase / dehydrase and lipid transport LH59_11780 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LH59_11780 PF02770 Acyl-CoA dehydrogenase, middle domain LH59_11780 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LH59_11785 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LH59_11785 PF00378 Enoyl-CoA hydratase/isomerase LH59_11785 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LH59_11790 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LH59_11790 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LH59_11805 PF01571 Aminomethyltransferase folate-binding domain LH59_11810 PF02618 YceG-like family LH59_11815 PF02223 Thymidylate kinase LH59_11820 PF12169 DNA polymerase III subunits gamma and tau domain III LH59_11825 PF01026 TatD related DNase LH59_11840 PF00497 Bacterial extracellular solute-binding proteins, family 3 LH59_11850 PF00005 ABC transporter LH59_11855 PF00491 Arginase family LH59_11865 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LH59_11865 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LH59_11875 PF10437 Bacterial lipoate protein ligase C-terminus LH59_11875 PF03099 Biotin/lipoate A/B protein ligase family LH59_11890 PF00043 Glutathione S-transferase, C-terminal domain LH59_11890 PF02798 Glutathione S-transferase, N-terminal domain LH59_11900 PF01037 Lrp/AsnC ligand binding domain LH59_11905 PF00255 Glutathione peroxidase LH59_11910 PF07690 Major Facilitator Superfamily LH59_11920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_11920 PF03466 LysR substrate binding domain LH59_11925 PF07005 Sugar-binding N-terminal domain LH59_11925 PF17042 Nucleotide-binding C-terminal domain LH59_11945 PF03441 FAD binding domain of DNA photolyase LH59_11945 PF00875 DNA photolyase LH59_11955 PF00578 AhpC/TSA family LH59_11975 PF00472 RF-1 domain LH59_11985 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LH59_12015 PF04073 Aminoacyl-tRNA editing domain LH59_12025 PF02321 Outer membrane efflux protein LH59_12035 PF00005 ABC transporter LH59_12050 PF00107 Zinc-binding dehydrogenase LH59_12050 PF16884 N-terminal domain of oxidoreductase LH59_12060 PF00072 Response regulator receiver domain LH59_12065 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LH59_12065 PF01266 FAD dependent oxidoreductase LH59_12070 PF00455 DeoR C terminal sensor domain LH59_12070 PF08220 DeoR-like helix-turn-helix domain LH59_12075 PF17912 MalK OB fold domain LH59_12075 PF00005 ABC transporter LH59_12080 PF08402 TOBE domain LH59_12080 PF00005 ABC transporter LH59_12085 PF00528 Binding-protein-dependent transport system inner membrane component LH59_12090 PF00528 Binding-protein-dependent transport system inner membrane component LH59_12110 PF00486 Transcriptional regulatory protein, C terminal LH59_12110 PF00072 Response regulator receiver domain LH59_12115 PF00132 Bacterial transferase hexapeptide (six repeats) LH59_12140 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LH59_12145 PF13609 Gram-negative porin LH59_12165 PF07992 Pyridine nucleotide-disulphide oxidoreductase LH59_12165 PF13192 Thioredoxin domain LH59_12170 PF02082 Transcriptional regulator LH59_12175 PF02770 Acyl-CoA dehydrogenase, middle domain LH59_12175 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LH59_12175 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LH59_12205 PF01037 Lrp/AsnC ligand binding domain LH59_12210 PF01266 FAD dependent oxidoreductase LH59_12215 PF12320 Type 5 capsule protein repressor C-terminal domain LH59_12215 PF00149 Calcineurin-like phosphoesterase LH59_12235 PF03401 Tripartite tricarboxylate transporter family receptor LH59_12240 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LH59_12240 PF13244 Domain of unknown function (DUF4040) LH59_12240 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter LH59_12240 PF00361 Proton-conducting membrane transporter LH59_12245 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LH59_12250 PF00361 Proton-conducting membrane transporter LH59_12255 PF01899 Na+/H+ ion antiporter subunit LH59_12260 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) LH59_12265 PF03334 Na+/H+ antiporter subunit LH59_12280 PF14437 MafB19-like deaminase LH59_12285 PF17676 LD-carboxypeptidase C-terminal domain LH59_12285 PF02016 LD-carboxypeptidase N-terminal domain LH59_12290 PF12848 ABC transporter LH59_12290 PF00005 ABC transporter LH59_12295 PF07690 Major Facilitator Superfamily LH59_12300 PF00005 ABC transporter LH59_12320 PF01205 Uncharacterized protein family UPF0029 LH59_12325 PF00085 Thioredoxin LH59_12330 PF00296 Luciferase-like monooxygenase LH59_12340 PF00860 Permease family LH59_12345 PF00814 Glycoprotease family LH59_12350 PF02660 Glycerol-3-phosphate acyltransferase LH59_12355 PF01975 Survival protein SurE LH59_12365 PF01476 LysM domain LH59_12365 PF01551 Peptidase family M23 LH59_12385 PF03466 LysR substrate binding domain LH59_12385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_12390 PF07690 Major Facilitator Superfamily LH59_12395 PF05958 tRNA (Uracil-5-)-methyltransferase LH59_12400 PF09278 MerR, DNA binding LH59_12400 PF00376 MerR family regulatory protein LH59_12405 PF00403 Heavy-metal-associated domain LH59_12415 PF00462 Glutaredoxin LH59_12415 PF08534 Redoxin LH59_12420 PF07992 Pyridine nucleotide-disulphide oxidoreductase LH59_12420 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LH59_12425 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ LH59_12430 PF03009 Glycerophosphoryl diester phosphodiesterase family LH59_12435 PF07687 Peptidase dimerisation domain LH59_12435 PF01546 Peptidase family M20/M25/M40 LH59_12440 PF13145 PPIC-type PPIASE domain LH59_12445 PF13472 GDSL-like Lipase/Acylhydrolase family LH59_12450 PF00005 ABC transporter LH59_12460 PF00528 Binding-protein-dependent transport system inner membrane component LH59_12465 PF00005 ABC transporter LH59_12465 PF08402 TOBE domain LH59_12470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_12470 PF03466 LysR substrate binding domain LH59_12480 PF12241 Trans-2-enoyl-CoA reductase catalytic region LH59_12480 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase LH59_12480 PF07055 Enoyl reductase FAD binding domain LH59_12490 PF03466 LysR substrate binding domain LH59_12490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_12505 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LH59_12515 PF01425 Amidase LH59_12520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_12520 PF03466 LysR substrate binding domain LH59_12525 PF07286 Protein of unknown function (DUF1445) LH59_12535 PF02653 Branched-chain amino acid transport system / permease component LH59_12545 PF00005 ABC transporter LH59_12545 PF12399 Branched-chain amino acid ATP-binding cassette transporter LH59_12550 PF00005 ABC transporter LH59_12555 PF13609 Gram-negative porin LH59_12560 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LH59_12575 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain LH59_12575 PF00293 NUDIX domain LH59_12575 PF09297 NADH pyrophosphatase zinc ribbon domain LH59_12585 PF01968 Hydantoinase/oxoprolinase LH59_12585 PF05378 Hydantoinase/oxoprolinase N-terminal region LH59_12605 PF00497 Bacterial extracellular solute-binding proteins, family 3 LH59_12610 PF00528 Binding-protein-dependent transport system inner membrane component LH59_12615 PF00005 ABC transporter LH59_12620 PF00857 Isochorismatase family LH59_12625 PF01965 DJ-1/PfpI family LH59_12625 PF12833 Helix-turn-helix domain LH59_12630 PF02824 TGS domain LH59_12630 PF13291 ACT domain LH59_12630 PF04607 Region found in RelA / SpoT proteins LH59_12635 PF01192 RNA polymerase Rpb6 LH59_12645 PF00625 Guanylate kinase LH59_12650 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LH59_12655 PF00034 Cytochrome c LH59_12665 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB LH59_12665 PF17287 POTRA domain LH59_12665 PF08479 POTRA domain, ShlB-type LH59_12675 PF00877 NlpC/P60 family LH59_12680 PF00593 TonB dependent receptor LH59_12680 PF07715 TonB-dependent Receptor Plug Domain LH59_12690 PF01048 Phosphorylase superfamily LH59_12690 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus LH59_12695 PF00324 Amino acid permease LH59_12700 PF03755 YicC-like family, N-terminal region LH59_12700 PF08340 Domain of unknown function (DUF1732) LH59_12705 PF03725 3' exoribonuclease family, domain 2 LH59_12705 PF01138 3' exoribonuclease family, domain 1 LH59_12715 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LH59_12715 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LH59_12715 PF02770 Acyl-CoA dehydrogenase, middle domain LH59_12720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LH59_12720 PF00672 HAMP domain LH59_12720 PF02203 Tar ligand binding domain homologue LH59_12725 PF00563 EAL domain LH59_12725 PF03707 Bacterial signalling protein N terminal repeat LH59_12725 PF00990 Diguanylate cyclase, GGDEF domain LH59_12730 PF01725 Ham1 family LH59_12735 PF04055 Radical SAM superfamily LH59_12735 PF06969 HemN C-terminal domain LH59_12745 PF00512 His Kinase A (phospho-acceptor) domain LH59_12745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LH59_12745 PF00989 PAS fold LH59_12750 PF02954 Bacterial regulatory protein, Fis family LH59_12750 PF00158 Sigma-54 interaction domain LH59_12750 PF00072 Response regulator receiver domain LH59_12755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_12755 PF03466 LysR substrate binding domain LH59_12760 PF17954 Quercetinase C-terminal cupin domain LH59_12760 PF02678 Pirin LH59_12765 PF05726 Pirin C-terminal cupin domain LH59_12765 PF02678 Pirin LH59_12770 PF03401 Tripartite tricarboxylate transporter family receptor LH59_12775 PF08402 TOBE domain LH59_12775 PF00005 ABC transporter LH59_12780 PF00528 Binding-protein-dependent transport system inner membrane component LH59_12785 PF13416 Bacterial extracellular solute-binding protein LH59_12790 PF00970 Oxidoreductase FAD-binding domain LH59_12790 PF00175 Oxidoreductase NAD-binding domain LH59_12795 PF03401 Tripartite tricarboxylate transporter family receptor LH59_12805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_12805 PF03466 LysR substrate binding domain LH59_12810 PF01042 Endoribonuclease L-PSP LH59_12815 PF00270 DEAD/DEAH box helicase LH59_12815 PF17191 RecG wedge domain LH59_12815 PF00271 Helicase conserved C-terminal domain LH59_12820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_12820 PF03466 LysR substrate binding domain LH59_12825 PF00210 Ferritin-like domain LH59_12830 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LH59_12830 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LH59_12830 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LH59_12840 PF00534 Glycosyl transferases group 1 LH59_12870 PF00544 Pectate lyase LH59_12880 PF13458 Periplasmic binding protein LH59_12885 PF00486 Transcriptional regulatory protein, C terminal LH59_12885 PF00072 Response regulator receiver domain LH59_12890 PF00512 His Kinase A (phospho-acceptor) domain LH59_12890 PF00672 HAMP domain LH59_12890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LH59_12905 PF00005 ABC transporter LH59_12905 PF17912 MalK OB fold domain LH59_12910 PF00528 Binding-protein-dependent transport system inner membrane component LH59_12915 PF00528 Binding-protein-dependent transport system inner membrane component LH59_12920 PF13416 Bacterial extracellular solute-binding protein LH59_12925 PF14748 Pyrroline-5-carboxylate reductase dimerisation LH59_12925 PF03807 NADP oxidoreductase coenzyme F420-dependent LH59_12930 PF02592 Putative vitamin uptake transporter LH59_12935 PF13458 Periplasmic binding protein LH59_12940 PF02653 Branched-chain amino acid transport system / permease component LH59_12945 PF11862 Domain of unknown function (DUF3382) LH59_12945 PF02653 Branched-chain amino acid transport system / permease component LH59_12950 PF12399 Branched-chain amino acid ATP-binding cassette transporter LH59_12950 PF00005 ABC transporter LH59_12955 PF00005 ABC transporter LH59_12965 PF01177 Asp/Glu/Hydantoin racemase LH59_12970 PF07969 Amidohydrolase family LH59_12975 PF03401 Tripartite tricarboxylate transporter family receptor LH59_12980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_12980 PF03466 LysR substrate binding domain LH59_12985 PF02798 Glutathione S-transferase, N-terminal domain LH59_12985 PF00043 Glutathione S-transferase, C-terminal domain LH59_12990 PF07995 Glucose / Sorbosone dehydrogenase LH59_13000 PF00892 EamA-like transporter family LH59_13005 PF04241 Protein of unknown function (DUF423) LH59_13010 PF08240 Alcohol dehydrogenase GroES-like domain LH59_13010 PF00107 Zinc-binding dehydrogenase LH59_13025 PF00491 Arginase family LH59_13030 PF03180 NLPA lipoprotein LH59_13035 PF00990 Diguanylate cyclase, GGDEF domain LH59_13035 PF00072 Response regulator receiver domain LH59_13040 PF07690 Major Facilitator Superfamily LH59_13050 PF00149 Calcineurin-like phosphoesterase LH59_13055 PF01070 FMN-dependent dehydrogenase LH59_13060 PF02666 Phosphatidylserine decarboxylase LH59_13065 PF12848 ABC transporter LH59_13065 PF00005 ABC transporter LH59_13070 PF03328 HpcH/HpaI aldolase/citrate lyase family LH59_13075 PF00072 Response regulator receiver domain LH59_13075 PF00486 Transcriptional regulatory protein, C terminal LH59_13090 PF01266 FAD dependent oxidoreductase LH59_13095 PF00793 DAHP synthetase I family LH59_13100 PF03707 Bacterial signalling protein N terminal repeat LH59_13100 PF00563 EAL domain LH59_13100 PF00990 Diguanylate cyclase, GGDEF domain LH59_13110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_13110 PF03466 LysR substrate binding domain LH59_13120 PF05247 Flagellar transcriptional activator (FlhD) LH59_13130 PF00072 Response regulator receiver domain LH59_13130 PF13188 PAS domain LH59_13130 PF08448 PAS fold LH59_13130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LH59_13130 PF00512 His Kinase A (phospho-acceptor) domain LH59_13140 PF04552 Sigma-54, DNA binding domain LH59_13140 PF04963 Sigma-54 factor, core binding domain LH59_13140 PF00309 Sigma-54 factor, Activator interacting domain (AID) LH59_13145 PF02954 Bacterial regulatory protein, Fis family LH59_13145 PF00158 Sigma-54 interaction domain LH59_13150 PF00072 Response regulator receiver domain LH59_13150 PF00158 Sigma-54 interaction domain LH59_13150 PF02954 Bacterial regulatory protein, Fis family LH59_13195 PF01965 DJ-1/PfpI family LH59_13215 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LH59_13215 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LH59_13230 PF03707 Bacterial signalling protein N terminal repeat LH59_13230 PF00990 Diguanylate cyclase, GGDEF domain LH59_13230 PF00563 EAL domain LH59_13230 PF13188 PAS domain LH59_13245 PF07715 TonB-dependent Receptor Plug Domain LH59_13245 PF00593 TonB dependent receptor LH59_13255 PF02308 MgtC family LH59_13270 PF00034 Cytochrome c LH59_13275 PF05199 GMC oxidoreductase LH59_13275 PF00732 GMC oxidoreductase LH59_13280 PF13618 Gluconate 2-dehydrogenase subunit 3 LH59_13285 PF03471 Transporter associated domain LH59_13285 PF03741 Integral membrane protein TerC family LH59_13295 PF00512 His Kinase A (phospho-acceptor) domain LH59_13295 PF00672 HAMP domain LH59_13295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LH59_13310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_13310 PF03466 LysR substrate binding domain LH59_13320 PF07690 Major Facilitator Superfamily LH59_13330 PF01970 Tripartite tricarboxylate transporter TctA family LH59_13340 PF07963 Prokaryotic N-terminal methylation motif LH59_13340 PF08334 Type II secretion system (T2SS), protein G LH59_13365 PF00437 Type II/IV secretion system protein LH59_13370 PF00482 Type II secretion system (T2SS), protein F LH59_13375 PF12849 PBP superfamily domain LH59_13380 PF12849 PBP superfamily domain LH59_13425 PF02501 Type II secretion system (T2SS), protein I LH59_13425 PF07963 Prokaryotic N-terminal methylation motif LH59_13430 PF07963 Prokaryotic N-terminal methylation motif LH59_13430 PF11612 Type II secretion system (T2SS), protein J LH59_13470 PF00990 Diguanylate cyclase, GGDEF domain LH59_13470 PF07694 5TMR of 5TMR-LYT LH59_13475 PF09278 MerR, DNA binding LH59_13475 PF00376 MerR family regulatory protein LH59_13485 PF07694 5TMR of 5TMR-LYT LH59_13485 PF00990 Diguanylate cyclase, GGDEF domain LH59_13515 PF00005 ABC transporter LH59_13520 PF00528 Binding-protein-dependent transport system inner membrane component LH59_13525 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LH59_13555 PF00595 PDZ domain LH59_13555 PF03572 Peptidase family S41 LH59_13575 PF01594 AI-2E family transporter LH59_13585 PF17676 LD-carboxypeptidase C-terminal domain LH59_13585 PF02016 LD-carboxypeptidase N-terminal domain LH59_13590 PF10005 zinc-ribbon domain LH59_13590 PF15887 Putative zinc-binding metallo-peptidase LH59_13600 PF13520 Amino acid permease LH59_13610 PF07969 Amidohydrolase family LH59_13615 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LH59_13615 PF00005 ABC transporter LH59_13620 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LH59_13620 PF00005 ABC transporter LH59_13625 PF12911 N-terminal TM domain of oligopeptide transport permease C LH59_13625 PF00528 Binding-protein-dependent transport system inner membrane component LH59_13630 PF00528 Binding-protein-dependent transport system inner membrane component LH59_13635 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LH59_13640 PF07171 MlrC C-terminus LH59_13640 PF07364 Metallopeptidase family M81 LH59_13645 PF01042 Endoribonuclease L-PSP LH59_13650 PF01266 FAD dependent oxidoreductase LH59_13665 PF01557 Fumarylacetoacetate (FAA) hydrolase family LH59_13670 PF02423 Ornithine cyclodeaminase/mu-crystallin family LH59_13680 PF00866 Ring hydroxylating beta subunit LH59_13685 PF00355 Rieske [2Fe-2S] domain LH59_13685 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LH59_13690 PF00355 Rieske [2Fe-2S] domain LH59_13695 PF07992 Pyridine nucleotide-disulphide oxidoreductase LH59_13695 PF14759 Reductase C-terminal LH59_13705 PF01557 Fumarylacetoacetate (FAA) hydrolase family LH59_13710 PF03401 Tripartite tricarboxylate transporter family receptor LH59_13735 PF02798 Glutathione S-transferase, N-terminal domain LH59_13735 PF00043 Glutathione S-transferase, C-terminal domain LH59_13740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_13740 PF03466 LysR substrate binding domain LH59_13745 PF00850 Histone deacetylase domain LH59_13750 PF00083 Sugar (and other) transporter LH59_13750 PF07690 Major Facilitator Superfamily LH59_13760 PF06039 Malate:quinone oxidoreductase (Mqo) LH59_13765 PF12706 Beta-lactamase superfamily domain LH59_13775 PF02798 Glutathione S-transferase, N-terminal domain LH59_13790 PF03358 NADPH-dependent FMN reductase LH59_13800 PF01758 Sodium Bile acid symporter family LH59_13810 PF01022 Bacterial regulatory protein, arsR family LH59_13815 PF04264 YceI-like domain LH59_13830 PF00593 TonB dependent receptor LH59_13830 PF07715 TonB-dependent Receptor Plug Domain LH59_13845 PF00005 ABC transporter LH59_13850 PF00528 Binding-protein-dependent transport system inner membrane component LH59_13855 PF00528 Binding-protein-dependent transport system inner membrane component LH59_13865 PF01053 Cys/Met metabolism PLP-dependent enzyme LH59_13870 PF03466 LysR substrate binding domain LH59_13870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_13895 PF00528 Binding-protein-dependent transport system inner membrane component LH59_13900 PF00528 Binding-protein-dependent transport system inner membrane component LH59_13905 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LH59_13915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_13915 PF03466 LysR substrate binding domain LH59_13920 PF00857 Isochorismatase family LH59_13925 PF00149 Calcineurin-like phosphoesterase LH59_13935 PF16868 NMT1-like family LH59_13940 PF00528 Binding-protein-dependent transport system inner membrane component LH59_13945 PF00528 Binding-protein-dependent transport system inner membrane component LH59_13950 PF00005 ABC transporter LH59_13960 PF00117 Glutamine amidotransferase class-I LH59_13960 PF00958 GMP synthase C terminal domain LH59_13970 PF05425 Copper resistance protein D LH59_13990 PF03401 Tripartite tricarboxylate transporter family receptor LH59_13995 PF08450 SMP-30/Gluconolactonase/LRE-like region LH59_14000 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus LH59_14000 PF08666 SAF domain LH59_14005 PF00701 Dihydrodipicolinate synthetase family LH59_14010 PF00171 Aldehyde dehydrogenase family LH59_14015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LH59_14015 PF00512 His Kinase A (phospho-acceptor) domain LH59_14020 PF00072 Response regulator receiver domain LH59_14020 PF00486 Transcriptional regulatory protein, C terminal LH59_14030 PF01032 FecCD transport family LH59_14035 PF00127 Copper binding proteins, plastocyanin/azurin family LH59_14040 PF08402 TOBE domain LH59_14040 PF00005 ABC transporter LH59_14045 PF00585 C-terminal regulatory domain of Threonine dehydratase LH59_14045 PF00291 Pyridoxal-phosphate dependent enzyme LH59_14055 PF03971 Monomeric isocitrate dehydrogenase LH59_14060 PF09335 SNARE associated Golgi protein LH59_14065 PF03649 Uncharacterised protein family (UPF0014) LH59_14070 PF00005 ABC transporter LH59_14075 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) LH59_14105 PF07690 Major Facilitator Superfamily LH59_14110 PF00593 TonB dependent receptor LH59_14110 PF07660 Secretin and TonB N terminus short domain LH59_14110 PF07715 TonB-dependent Receptor Plug Domain LH59_14120 PF01032 FecCD transport family LH59_14125 PF01032 FecCD transport family LH59_14130 PF00005 ABC transporter LH59_14135 PF00005 ABC transporter LH59_14140 PF00528 Binding-protein-dependent transport system inner membrane component LH59_14150 PF03060 Nitronate monooxygenase LH59_14155 PF00578 AhpC/TSA family LH59_14165 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LH59_14165 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LH59_14170 PF00083 Sugar (and other) transporter LH59_14175 PF00501 AMP-binding enzyme LH59_14175 PF13193 AMP-binding enzyme C-terminal domain LH59_14180 PF03466 LysR substrate binding domain LH59_14180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_14190 PF01118 Semialdehyde dehydrogenase, NAD binding domain LH59_14195 PF03466 LysR substrate binding domain LH59_14195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_14200 PF00654 Voltage gated chloride channel LH59_14205 PF01047 MarR family LH59_14215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LH59_14215 PF00512 His Kinase A (phospho-acceptor) domain LH59_14215 PF00989 PAS fold LH59_14220 PF00196 Bacterial regulatory proteins, luxR family LH59_14220 PF00072 Response regulator receiver domain LH59_14250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_14250 PF03466 LysR substrate binding domain LH59_14260 PF01053 Cys/Met metabolism PLP-dependent enzyme LH59_14280 PF00528 Binding-protein-dependent transport system inner membrane component LH59_14290 PF00497 Bacterial extracellular solute-binding proteins, family 3 LH59_14295 PF00497 Bacterial extracellular solute-binding proteins, family 3 LH59_14300 PF03401 Tripartite tricarboxylate transporter family receptor LH59_14305 PF00561 alpha/beta hydrolase fold LH59_14310 PF01470 Pyroglutamyl peptidase LH59_14315 PF03466 LysR substrate binding domain LH59_14315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_14335 PF01042 Endoribonuclease L-PSP LH59_14340 PF03466 LysR substrate binding domain LH59_14340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_14350 PF13649 Methyltransferase domain LH59_14370 PF03466 LysR substrate binding domain LH59_14370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_14375 PF13378 Enolase C-terminal domain-like LH59_14375 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LH59_14380 PF03401 Tripartite tricarboxylate transporter family receptor LH59_14385 PF07729 FCD domain LH59_14385 PF00392 Bacterial regulatory proteins, gntR family LH59_14390 PF00701 Dihydrodipicolinate synthetase family LH59_14400 PF03401 Tripartite tricarboxylate transporter family receptor LH59_14405 PF03737 Aldolase/RraA LH59_14410 PF00920 Dehydratase family LH59_14415 PF07729 FCD domain LH59_14415 PF00392 Bacterial regulatory proteins, gntR family LH59_14430 PF00528 Binding-protein-dependent transport system inner membrane component LH59_14440 PF00005 ABC transporter LH59_14455 PF02311 AraC-like ligand binding domain LH59_14455 PF12833 Helix-turn-helix domain LH59_14460 PF00561 alpha/beta hydrolase fold LH59_14465 PF01053 Cys/Met metabolism PLP-dependent enzyme LH59_14475 PF00497 Bacterial extracellular solute-binding proteins, family 3 LH59_14480 PF00528 Binding-protein-dependent transport system inner membrane component LH59_14500 PF00072 Response regulator receiver domain LH59_14500 PF00196 Bacterial regulatory proteins, luxR family LH59_14505 PF00672 HAMP domain LH59_14505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LH59_14505 PF07730 Histidine kinase LH59_14505 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LH59_14510 PF03205 Molybdopterin guanine dinucleotide synthesis protein B LH59_14515 PF00484 Carbonic anhydrase LH59_14520 PF06463 Molybdenum Cofactor Synthesis C LH59_14520 PF04055 Radical SAM superfamily LH59_14525 PF09312 SurA N-terminal domain LH59_14525 PF00639 PPIC-type PPIASE domain LH59_14530 PF02665 Nitrate reductase gamma subunit LH59_14535 PF02613 Nitrate reductase delta subunit LH59_14540 PF13247 4Fe-4S dicluster domain LH59_14540 PF14711 Respiratory nitrate reductase beta C-terminal LH59_14545 PF14710 Respiratory nitrate reductase alpha N-terminal LH59_14545 PF00384 Molybdopterin oxidoreductase LH59_14545 PF01568 Molydopterin dinucleotide binding domain LH59_14550 PF07690 Major Facilitator Superfamily LH59_14555 PF07690 Major Facilitator Superfamily LH59_14570 PF01494 FAD binding domain LH59_14575 PF03466 LysR substrate binding domain LH59_14575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_14580 PF13533 Biotin-lipoyl like LH59_14585 PF00873 AcrB/AcrD/AcrF family LH59_14590 PF00873 AcrB/AcrD/AcrF family LH59_14595 PF03466 LysR substrate binding domain LH59_14595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_14600 PF01546 Peptidase family M20/M25/M40 LH59_14600 PF07687 Peptidase dimerisation domain LH59_14605 PF03401 Tripartite tricarboxylate transporter family receptor LH59_14635 PF00392 Bacterial regulatory proteins, gntR family LH59_14635 PF00155 Aminotransferase class I and II LH59_14640 PF00368 Hydroxymethylglutaryl-coenzyme A reductase LH59_14655 PF03060 Nitronate monooxygenase LH59_14675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LH59_14675 PF18698 Histidine kinase sensor domain LH59_14675 PF00672 HAMP domain LH59_14675 PF00512 His Kinase A (phospho-acceptor) domain LH59_14675 PF00989 PAS fold LH59_14680 PF00072 Response regulator receiver domain LH59_14680 PF00486 Transcriptional regulatory protein, C terminal LH59_14690 PF00174 Oxidoreductase molybdopterin binding domain LH59_14700 PF01641 SelR domain LH59_14705 PF01625 Peptide methionine sulfoxide reductase LH59_14710 PF12951 Passenger-associated-transport-repeat LH59_14720 PF00210 Ferritin-like domain LH59_14750 PF00155 Aminotransferase class I and II LH59_14750 PF00392 Bacterial regulatory proteins, gntR family LH59_14755 PF00892 EamA-like transporter family LH59_14760 PF04328 Selenoprotein, putative LH59_14765 PF02554 Carbon starvation protein CstA LH59_14765 PF13722 5TM C-terminal transporter carbon starvation CstA LH59_14770 PF17200 Single Cache domain 2 LH59_14770 PF07730 Histidine kinase LH59_14775 PF00196 Bacterial regulatory proteins, luxR family LH59_14775 PF00072 Response regulator receiver domain LH59_14780 PF01227 GTP cyclohydrolase I LH59_14790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_14790 PF03466 LysR substrate binding domain LH59_14795 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LH59_14800 PF00005 ABC transporter LH59_14805 PF00528 Binding-protein-dependent transport system inner membrane component LH59_14815 PF07715 TonB-dependent Receptor Plug Domain LH59_14815 PF00593 TonB dependent receptor LH59_14820 PF16220 Domain of unknown function (DUF4880) LH59_14820 PF04773 FecR protein LH59_14825 PF04542 Sigma-70 region 2 LH59_14825 PF08281 Sigma-70, region 4 LH59_14830 PF00155 Aminotransferase class I and II LH59_14830 PF00392 Bacterial regulatory proteins, gntR family LH59_14835 PF13018 Extended Signal Peptide of Type V secretion system LH59_14835 PF03797 Autotransporter beta-domain LH59_14835 PF02395 Immunoglobulin A1 protease LH59_14840 PF03797 Autotransporter beta-domain LH59_14840 PF02395 Immunoglobulin A1 protease LH59_14845 PF03401 Tripartite tricarboxylate transporter family receptor LH59_14850 PF00596 Class II Aldolase and Adducin N-terminal domain LH59_14855 PF01266 FAD dependent oxidoreductase LH59_14865 PF07683 Cobalamin synthesis protein cobW C-terminal domain LH59_14865 PF02492 CobW/HypB/UreG, nucleotide-binding domain LH59_14870 PF01979 Amidohydrolase family LH59_14875 PF00005 ABC transporter LH59_14875 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LH59_14880 PF00528 Binding-protein-dependent transport system inner membrane component LH59_14880 PF12911 N-terminal TM domain of oligopeptide transport permease C LH59_14885 PF00528 Binding-protein-dependent transport system inner membrane component LH59_14890 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LH59_14895 PF01515 Phosphate acetyl/butaryl transferase LH59_14900 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LH59_14900 PF00205 Thiamine pyrophosphate enzyme, central domain LH59_14900 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LH59_14905 PF09339 IclR helix-turn-helix domain LH59_14905 PF01614 Bacterial transcriptional regulator LH59_14910 PF00271 Helicase conserved C-terminal domain LH59_14910 PF00270 DEAD/DEAH box helicase LH59_14910 PF03880 DbpA RNA binding domain LH59_14920 PF01242 6-pyruvoyl tetrahydropterin synthase LH59_14930 PF04632 Fusaric acid resistance protein family LH59_14935 PF07869 Protein of unknown function (DUF1656) LH59_14940 PF00529 HlyD membrane-fusion protein of T1SS LH59_14940 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LH59_14945 PF02321 Outer membrane efflux protein LH59_14955 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LH59_14955 PF00205 Thiamine pyrophosphate enzyme, central domain LH59_14955 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LH59_14960 PF03401 Tripartite tricarboxylate transporter family receptor LH59_14975 PF02230 Phospholipase/Carboxylesterase LH59_14980 PF00324 Amino acid permease LH59_14985 PF02743 Cache domain LH59_14985 PF00672 HAMP domain LH59_14985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LH59_15000 PF14579 Helix-hairpin-helix motif LH59_15000 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LH59_15000 PF07733 Bacterial DNA polymerase III alpha NTPase domain LH59_15000 PF02811 PHP domain LH59_15010 PF07739 TipAS antibiotic-recognition domain LH59_15010 PF13411 MerR HTH family regulatory protein LH59_15015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_15015 PF03466 LysR substrate binding domain LH59_15020 PF00248 Aldo/keto reductase family LH59_15030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_15030 PF03466 LysR substrate binding domain LH59_15040 PF01292 Prokaryotic cytochrome b561 LH59_15060 PF02203 Tar ligand binding domain homologue LH59_15060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LH59_15060 PF00672 HAMP domain LH59_15080 PF02627 Carboxymuconolactone decarboxylase family LH59_15085 PF07364 Metallopeptidase family M81 LH59_15085 PF07171 MlrC C-terminus LH59_15100 PF00005 ABC transporter LH59_15110 PF02653 Branched-chain amino acid transport system / permease component LH59_15115 PF00158 Sigma-54 interaction domain LH59_15115 PF13188 PAS domain LH59_15115 PF02954 Bacterial regulatory protein, Fis family LH59_15120 PF00795 Carbon-nitrogen hydrolase LH59_15125 PF06983 3-demethylubiquinone-9 3-methyltransferase LH59_15130 PF07690 Major Facilitator Superfamily LH59_15135 PF06772 Bacterial low temperature requirement A protein (LtrA) LH59_15145 PF07715 TonB-dependent Receptor Plug Domain LH59_15145 PF00593 TonB dependent receptor LH59_15150 PF00891 O-methyltransferase domain LH59_15150 PF16864 Dimerisation domain LH59_15160 PF09339 IclR helix-turn-helix domain LH59_15160 PF01614 Bacterial transcriptional regulator LH59_15165 PF05199 GMC oxidoreductase LH59_15165 PF00732 GMC oxidoreductase LH59_15170 PF07690 Major Facilitator Superfamily LH59_15170 PF00083 Sugar (and other) transporter LH59_15175 PF00248 Aldo/keto reductase family LH59_15185 PF03401 Tripartite tricarboxylate transporter family receptor LH59_15190 PF00440 Bacterial regulatory proteins, tetR family LH59_15210 PF04463 Protein of unknown function (DUF523) LH59_15220 PF12833 Helix-turn-helix domain LH59_15220 PF02311 AraC-like ligand binding domain LH59_15235 PF01618 MotA/TolQ/ExbB proton channel family LH59_15240 PF05736 OprF membrane domain LH59_15240 PF00691 OmpA family LH59_15250 PF09856 Predicted transcriptional regulator (DUF2083) LH59_15250 PF01381 Helix-turn-helix LH59_15250 PF06114 IrrE N-terminal-like domain LH59_15255 PF03795 YCII-related domain LH59_15260 PF03795 YCII-related domain LH59_15270 PF04542 Sigma-70 region 2 LH59_15270 PF08281 Sigma-70, region 4 LH59_15280 PF00892 EamA-like transporter family LH59_15290 PF13419 Haloacid dehalogenase-like hydrolase LH59_15295 PF07690 Major Facilitator Superfamily LH59_15300 PF03466 LysR substrate binding domain LH59_15300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_15320 PF02798 Glutathione S-transferase, N-terminal domain LH59_15320 PF00043 Glutathione S-transferase, C-terminal domain LH59_15330 PF01047 MarR family LH59_15335 PF10127 RNA repair pathway DNA polymerase beta family LH59_15350 PF00285 Citrate synthase, C-terminal domain LH59_15355 PF02515 CoA-transferase family III LH59_15385 PF13677 Membrane MotB of proton-channel complex MotA/MotB LH59_15385 PF00691 OmpA family LH59_15395 PF03055 Retinal pigment epithelial membrane protein LH59_15425 PF04717 Type VI secretion system, phage-baseplate injector LH59_15430 PF10431 C-terminal, D2-small domain, of ClpB protein LH59_15430 PF17871 AAA lid domain LH59_15430 PF00004 ATPase family associated with various cellular activities (AAA) LH59_15430 PF07724 AAA domain (Cdc48 subfamily) LH59_15550 PF04972 BON domain LH59_15550 PF00691 OmpA family LH59_15575 PF00557 Metallopeptidase family M24 LH59_15585 PF00043 Glutathione S-transferase, C-terminal domain LH59_15585 PF13417 Glutathione S-transferase, N-terminal domain LH59_15590 PF00080 Copper/zinc superoxide dismutase (SODC) LH59_15595 PF04286 Protein of unknown function (DUF445) LH59_15600 PF03466 LysR substrate binding domain LH59_15600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_15605 PF00113 Enolase, C-terminal TIM barrel domain LH59_15605 PF03952 Enolase, N-terminal domain LH59_15630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_15630 PF03466 LysR substrate binding domain LH59_15635 PF00378 Enoyl-CoA hydratase/isomerase LH59_15635 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LH59_15635 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LH59_15640 PF00108 Thiolase, N-terminal domain LH59_15640 PF02803 Thiolase, C-terminal domain LH59_15645 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LH59_15645 PF02770 Acyl-CoA dehydrogenase, middle domain LH59_15645 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LH59_15650 PF02770 Acyl-CoA dehydrogenase, middle domain LH59_15650 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LH59_15650 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LH59_15655 PF13193 AMP-binding enzyme C-terminal domain LH59_15655 PF00501 AMP-binding enzyme LH59_15660 PF03401 Tripartite tricarboxylate transporter family receptor LH59_15665 PF00291 Pyridoxal-phosphate dependent enzyme LH59_15680 PF03466 LysR substrate binding domain LH59_15680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_15685 PF07690 Major Facilitator Superfamily LH59_15690 PF12802 MarR family LH59_15695 PF07690 Major Facilitator Superfamily LH59_15710 PF00111 2Fe-2S iron-sulfur cluster binding domain LH59_15710 PF01799 [2Fe-2S] binding domain LH59_15715 PF01494 FAD binding domain LH59_15720 PF00561 alpha/beta hydrolase fold LH59_15730 PF00857 Isochorismatase family LH59_15735 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LH59_15735 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LH59_15735 PF00034 Cytochrome c LH59_15740 PF01053 Cys/Met metabolism PLP-dependent enzyme LH59_15745 PF01037 Lrp/AsnC ligand binding domain LH59_15750 PF13609 Gram-negative porin LH59_15755 PF08402 TOBE domain LH59_15755 PF00005 ABC transporter LH59_15765 PF00528 Binding-protein-dependent transport system inner membrane component LH59_15770 PF00360 Phytochrome region LH59_15770 PF00563 EAL domain LH59_15770 PF00990 Diguanylate cyclase, GGDEF domain LH59_15770 PF01590 GAF domain LH59_15775 PF01339 CheB methylesterase LH59_15775 PF00072 Response regulator receiver domain LH59_15780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LH59_15780 PF00072 Response regulator receiver domain LH59_15780 PF01627 Hpt domain LH59_15780 PF01584 CheW-like domain LH59_15790 PF01739 CheR methyltransferase, SAM binding domain LH59_15800 PF00672 HAMP domain LH59_15800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LH59_15800 PF12729 Four helix bundle sensory module for signal transduction LH59_15805 PF01425 Amidase LH59_15820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_15820 PF03466 LysR substrate binding domain LH59_15825 PF07690 Major Facilitator Superfamily LH59_15840 PF08774 VRR-NUC domain LH59_15840 PF18081 Fanconi anemia-associated nuclease SAP domain LH59_15850 PF00583 Acetyltransferase (GNAT) family LH59_15875 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LH59_15875 PF00034 Cytochrome c LH59_15880 PF00732 GMC oxidoreductase LH59_15880 PF05199 GMC oxidoreductase LH59_15885 PF13618 Gluconate 2-dehydrogenase subunit 3 LH59_15895 PF07690 Major Facilitator Superfamily LH59_15900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_15900 PF03466 LysR substrate binding domain LH59_15905 PF01965 DJ-1/PfpI family LH59_15920 PF03401 Tripartite tricarboxylate transporter family receptor LH59_15925 PF14698 Argininosuccinate lyase C-terminal LH59_15925 PF00206 Lyase LH59_15930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_15930 PF03466 LysR substrate binding domain LH59_15945 PF00376 MerR family regulatory protein LH59_15945 PF09278 MerR, DNA binding LH59_15965 PF00561 alpha/beta hydrolase fold LH59_15975 PF00106 short chain dehydrogenase LH59_15980 PF06719 AraC-type transcriptional regulator N-terminus LH59_15980 PF12833 Helix-turn-helix domain LH59_16020 PF08240 Alcohol dehydrogenase GroES-like domain LH59_16020 PF00107 Zinc-binding dehydrogenase LH59_16025 PF02219 Methylenetetrahydrofolate reductase LH59_16030 PF03466 LysR substrate binding domain LH59_16030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_16035 PF03358 NADPH-dependent FMN reductase LH59_16045 PF08267 Cobalamin-independent synthase, N-terminal domain LH59_16045 PF01717 Cobalamin-independent synthase, Catalytic domain LH59_16065 PF06276 Ferric iron reductase FhuF-like transporter LH59_16065 PF04183 IucA / IucC family LH59_16075 PF07715 TonB-dependent Receptor Plug Domain LH59_16075 PF00593 TonB dependent receptor LH59_16085 PF00872 Transposase, Mutator family LH59_16105 PF00117 Glutamine amidotransferase class-I LH59_16105 PF00958 GMP synthase C terminal domain LH59_16105 PF02540 NAD synthase LH59_16110 PF00478 IMP dehydrogenase / GMP reductase domain LH59_16110 PF00571 CBS domain LH59_16135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_16135 PF03466 LysR substrate binding domain LH59_16140 PF03401 Tripartite tricarboxylate transporter family receptor LH59_16145 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LH59_16145 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LH59_16170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_16170 PF03466 LysR substrate binding domain LH59_16175 PF03401 Tripartite tricarboxylate transporter family receptor LH59_16180 PF01425 Amidase LH59_16210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_16210 PF03466 LysR substrate binding domain LH59_16215 PF13454 FAD-NAD(P)-binding LH59_16220 PF00528 Binding-protein-dependent transport system inner membrane component LH59_16225 PF00528 Binding-protein-dependent transport system inner membrane component LH59_16225 PF12911 N-terminal TM domain of oligopeptide transport permease C LH59_16230 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LH59_16230 PF00005 ABC transporter LH59_16235 PF00005 ABC transporter LH59_16235 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LH59_16240 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LH59_16255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_16255 PF03466 LysR substrate binding domain LH59_16260 PF03401 Tripartite tricarboxylate transporter family receptor LH59_16265 PF02615 Malate/L-lactate dehydrogenase LH59_16270 PF03401 Tripartite tricarboxylate transporter family receptor LH59_16315 PF02627 Carboxymuconolactone decarboxylase family LH59_16320 PF03401 Tripartite tricarboxylate transporter family receptor LH59_16335 PF03328 HpcH/HpaI aldolase/citrate lyase family LH59_16340 PF03466 LysR substrate binding domain LH59_16340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_16360 PF07660 Secretin and TonB N terminus short domain LH59_16360 PF00593 TonB dependent receptor LH59_16360 PF07715 TonB-dependent Receptor Plug Domain LH59_16375 PF01070 FMN-dependent dehydrogenase LH59_16390 PF00563 EAL domain LH59_16390 PF00990 Diguanylate cyclase, GGDEF domain LH59_16395 PF07715 TonB-dependent Receptor Plug Domain LH59_16395 PF00593 TonB dependent receptor LH59_16410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_16410 PF03466 LysR substrate binding domain LH59_16430 PF01636 Phosphotransferase enzyme family LH59_16450 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LH59_16460 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LH59_16480 PF00440 Bacterial regulatory proteins, tetR family LH59_16490 PF07690 Major Facilitator Superfamily LH59_16495 PF03466 LysR substrate binding domain LH59_16495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_16500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LH59_16500 PF00512 His Kinase A (phospho-acceptor) domain LH59_16500 PF00072 Response regulator receiver domain LH59_16500 PF00497 Bacterial extracellular solute-binding proteins, family 3 LH59_16505 PF00072 Response regulator receiver domain LH59_16530 PF03401 Tripartite tricarboxylate transporter family receptor LH59_16535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_16535 PF03466 LysR substrate binding domain LH59_16540 PF00701 Dihydrodipicolinate synthetase family LH59_16545 PF03401 Tripartite tricarboxylate transporter family receptor LH59_16560 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LH59_16570 PF03466 LysR substrate binding domain LH59_16570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_16580 PF03401 Tripartite tricarboxylate transporter family receptor LH59_16585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LH59_16585 PF00512 His Kinase A (phospho-acceptor) domain LH59_16585 PF08521 Two-component sensor kinase N-terminal LH59_16590 PF00486 Transcriptional regulatory protein, C terminal LH59_16590 PF00072 Response regulator receiver domain LH59_16605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LH59_16605 PF00672 HAMP domain LH59_16605 PF02203 Tar ligand binding domain homologue LH59_16620 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LH59_16620 PF02769 AIR synthase related protein, C-terminal domain LH59_16620 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal LH59_16630 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LH59_16635 PF03480 Bacterial extracellular solute-binding protein, family 7 LH59_16640 PF03449 Transcription elongation factor, N-terminal LH59_16640 PF01272 Transcription elongation factor, GreA/GreB, C-term LH59_16645 PF02811 PHP domain LH59_16665 PF00732 GMC oxidoreductase LH59_16665 PF05199 GMC oxidoreductase LH59_16670 PF03466 LysR substrate binding domain LH59_16670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_16680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_16680 PF03466 LysR substrate binding domain LH59_16685 PF07690 Major Facilitator Superfamily LH59_16685 PF00083 Sugar (and other) transporter LH59_16690 PF01546 Peptidase family M20/M25/M40 LH59_16690 PF07687 Peptidase dimerisation domain LH59_16695 PF00753 Metallo-beta-lactamase superfamily LH59_16695 PF03772 Competence protein LH59_16700 PF00290 Tryptophan synthase alpha chain LH59_16705 PF00291 Pyridoxal-phosphate dependent enzyme LH59_16710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_16710 PF03466 LysR substrate binding domain LH59_16730 PF03401 Tripartite tricarboxylate transporter family receptor LH59_16745 PF07702 UTRA domain LH59_16745 PF00392 Bacterial regulatory proteins, gntR family LH59_16750 PF05199 GMC oxidoreductase LH59_16750 PF00732 GMC oxidoreductase LH59_16755 PF00111 2Fe-2S iron-sulfur cluster binding domain LH59_16765 PF00171 Aldehyde dehydrogenase family LH59_16780 PF02656 Domain of unknown function (DUF202) LH59_16785 PF02656 Domain of unknown function (DUF202) LH59_16790 PF01381 Helix-turn-helix LH59_16815 PF02525 Flavodoxin-like fold LH59_16825 PF00166 Chaperonin 10 Kd subunit LH59_16830 PF00118 TCP-1/cpn60 chaperonin family LH59_16840 PF00011 Hsp20/alpha crystallin family LH59_16865 PF03781 Sulfatase-modifying factor enzyme 1 LH59_16870 PF17863 AAA lid domain LH59_16870 PF07726 ATPase family associated with various cellular activities (AAA) LH59_16890 PF13519 von Willebrand factor type A domain LH59_16905 PF00884 Sulfatase LH59_16915 PF01810 LysE type translocator LH59_16930 PF00593 TonB dependent receptor LH59_16930 PF07660 Secretin and TonB N terminus short domain LH59_16930 PF07715 TonB-dependent Receptor Plug Domain LH59_16945 PF00111 2Fe-2S iron-sulfur cluster binding domain LH59_16950 PF00106 short chain dehydrogenase LH59_16960 PF00005 ABC transporter LH59_16965 PF01613 Flavin reductase like domain LH59_16995 PF02110 Hydroxyethylthiazole kinase family LH59_17000 PF00593 TonB dependent receptor LH59_17000 PF07715 TonB-dependent Receptor Plug Domain LH59_17005 PF02872 5'-nucleotidase, C-terminal domain LH59_17005 PF00149 Calcineurin-like phosphoesterase LH59_17010 PF00005 ABC transporter LH59_17015 PF01032 FecCD transport family LH59_17020 PF01032 FecCD transport family LH59_17025 PF01497 Periplasmic binding protein LH59_17030 PF00593 TonB dependent receptor LH59_17030 PF07715 TonB-dependent Receptor Plug Domain LH59_17035 PF00486 Transcriptional regulatory protein, C terminal LH59_17035 PF00072 Response regulator receiver domain LH59_17040 PF00512 His Kinase A (phospho-acceptor) domain LH59_17040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LH59_17040 PF00672 HAMP domain LH59_17040 PF16750 Sensor domain of 2-component histidine kinase LH59_17045 PF01026 TatD related DNase LH59_17050 PF00005 ABC transporter LH59_17055 PF12704 MacB-like periplasmic core domain LH59_17055 PF02687 FtsX-like permease family LH59_17070 PF07690 Major Facilitator Superfamily LH59_17075 PF00472 RF-1 domain LH59_17075 PF03462 PCRF domain LH59_17080 PF00106 short chain dehydrogenase LH59_17085 PF01336 OB-fold nucleic acid binding domain LH59_17085 PF00152 tRNA synthetases class II (D, K and N) LH59_17095 PF00392 Bacterial regulatory proteins, gntR family LH59_17095 PF00155 Aminotransferase class I and II LH59_17100 PF03594 Benzoate membrane transport protein LH59_17105 PF01168 Alanine racemase, N-terminal domain LH59_17110 PF17932 Tetracyclin repressor-like, C-terminal domain LH59_17110 PF00440 Bacterial regulatory proteins, tetR family LH59_17115 PF02803 Thiolase, C-terminal domain LH59_17115 PF00108 Thiolase, N-terminal domain LH59_17120 PF00501 AMP-binding enzyme LH59_17125 PF00005 ABC transporter LH59_17140 PF12399 Branched-chain amino acid ATP-binding cassette transporter LH59_17140 PF00005 ABC transporter LH59_17145 PF00378 Enoyl-CoA hydratase/isomerase LH59_17150 PF00593 TonB dependent receptor LH59_17150 PF07715 TonB-dependent Receptor Plug Domain LH59_17155 PF02142 MGS-like domain LH59_17160 PF04384 Iron-sulphur cluster assembly LH59_17165 PF00111 2Fe-2S iron-sulfur cluster binding domain LH59_17170 PF00012 Hsp70 protein LH59_17175 PF07743 HSCB C-terminal oligomerisation domain LH59_17180 PF01521 Iron-sulphur cluster biosynthesis LH59_17185 PF01592 NifU-like N terminal domain LH59_17190 PF00266 Aminotransferase class-V LH59_17195 PF02082 Transcriptional regulator LH59_17200 PF01451 Low molecular weight phosphotyrosine protein phosphatase LH59_17205 PF17757 UvrB interaction domain LH59_17205 PF12344 Ultra-violet resistance protein B LH59_17205 PF02151 UvrB/uvrC motif LH59_17205 PF04851 Type III restriction enzyme, res subunit LH59_17205 PF00271 Helicase conserved C-terminal domain LH59_17210 PF00155 Aminotransferase class I and II LH59_17215 PF01726 LexA DNA binding domain LH59_17215 PF00717 Peptidase S24-like LH59_17220 PF00004 ATPase family associated with various cellular activities (AAA) LH59_17220 PF02190 ATP-dependent protease La (LON) substrate-binding domain LH59_17220 PF05362 Lon protease (S16) C-terminal proteolytic domain LH59_17225 PF07724 AAA domain (Cdc48 subfamily) LH59_17225 PF06689 ClpX C4-type zinc finger LH59_17225 PF10431 C-terminal, D2-small domain, of ClpB protein LH59_17230 PF00574 Clp protease LH59_17235 PF05697 Bacterial trigger factor protein (TF) LH59_17235 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LH59_17235 PF05698 Bacterial trigger factor protein (TF) C-terminus LH59_17240 PF01435 Peptidase family M48 LH59_17245 PF03350 Uncharacterized protein family, UPF0114 LH59_17250 PF00313 'Cold-shock' DNA-binding domain LH59_17260 PF00313 'Cold-shock' DNA-binding domain LH59_17285 PF01042 Endoribonuclease L-PSP LH59_17290 PF01168 Alanine racemase, N-terminal domain LH59_17290 PF14031 Putative serine dehydratase domain LH59_17295 PF03466 LysR substrate binding domain LH59_17295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_17310 PF00440 Bacterial regulatory proteins, tetR family LH59_17310 PF08361 MAATS-type transcriptional repressor, C-terminal region LH59_17330 PF00793 DAHP synthetase I family LH59_17345 PF00230 Major intrinsic protein LH59_17355 PF01565 FAD binding domain LH59_17355 PF02913 FAD linked oxidases, C-terminal domain LH59_17360 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LH59_17360 PF01266 FAD dependent oxidoreductase LH59_17365 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LH59_17365 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LH59_17370 PF00083 Sugar (and other) transporter LH59_17505 PF00574 Clp protease LH59_17520 PF02413 Caudovirales tail fibre assembly protein, lambda gpK LH59_17575 PF00145 C-5 cytosine-specific DNA methylase LH59_17600 PF00155 Aminotransferase class I and II LH59_17605 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal LH59_17605 PF14602 Hexapeptide repeat of succinyl-transferase LH59_17605 PF00132 Bacterial transferase hexapeptide (six repeats) LH59_17610 PF07687 Peptidase dimerisation domain LH59_17610 PF01546 Peptidase family M20/M25/M40 LH59_17615 PF05175 Methyltransferase small domain LH59_17620 PF12848 ABC transporter LH59_17620 PF00005 ABC transporter LH59_17635 PF07715 TonB-dependent Receptor Plug Domain LH59_17640 PF07715 TonB-dependent Receptor Plug Domain LH59_17655 PF03150 Di-haem cytochrome c peroxidase LH59_17665 PF00580 UvrD/REP helicase N-terminal domain LH59_17665 PF13361 UvrD-like helicase C-terminal domain LH59_17670 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 LH59_17670 PF01610 Transposase LH59_17670 PF13542 Helix-turn-helix domain of transposase family ISL3 LH59_17680 PF01029 NusB family LH59_17680 PF01189 16S rRNA methyltransferase RsmB/F LH59_17690 PF00551 Formyl transferase LH59_17695 PF01687 Riboflavin kinase LH59_17695 PF06574 FAD synthetase LH59_17700 PF06827 Zinc finger found in FPG and IleRS LH59_17700 PF00133 tRNA synthetases class I (I, L, M and V) LH59_17700 PF08264 Anticodon-binding domain of tRNA LH59_17705 PF01252 Signal peptidase (SPase) II LH59_17710 PF02441 Flavoprotein LH59_17710 PF04127 DNA / pantothenate metabolism flavoprotein LH59_17715 PF03401 Tripartite tricarboxylate transporter family receptor LH59_17730 PF03575 Peptidase family S51 LH59_17760 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LH59_17765 PF00005 ABC transporter LH59_17770 PF00528 Binding-protein-dependent transport system inner membrane component LH59_17775 PF00528 Binding-protein-dependent transport system inner membrane component LH59_17780 PF00497 Bacterial extracellular solute-binding proteins, family 3 LH59_17790 PF02423 Ornithine cyclodeaminase/mu-crystallin family LH59_17795 PF02566 OsmC-like protein LH59_17800 PF01566 Natural resistance-associated macrophage protein LH59_17805 PF00296 Luciferase-like monooxygenase LH59_17810 PF02798 Glutathione S-transferase, N-terminal domain LH59_17810 PF00043 Glutathione S-transferase, C-terminal domain LH59_17815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_17815 PF03466 LysR substrate binding domain LH59_17830 PF07690 Major Facilitator Superfamily LH59_17835 PF00005 ABC transporter LH59_17840 PF12399 Branched-chain amino acid ATP-binding cassette transporter LH59_17840 PF00005 ABC transporter LH59_17845 PF11862 Domain of unknown function (DUF3382) LH59_17845 PF02653 Branched-chain amino acid transport system / permease component LH59_17850 PF02653 Branched-chain amino acid transport system / permease component LH59_17855 PF13458 Periplasmic binding protein LH59_17860 PF01619 Proline dehydrogenase LH59_17860 PF18327 Proline utilization A proline dehydrogenase N-terminal domain LH59_17860 PF00171 Aldehyde dehydrogenase family LH59_17860 PF14850 DNA-binding domain of Proline dehydrogenase LH59_17870 PF02470 MlaD protein LH59_17875 PF04403 Paraquat-inducible protein A LH59_17880 PF07724 AAA domain (Cdc48 subfamily) LH59_17880 PF00004 ATPase family associated with various cellular activities (AAA) LH59_17880 PF17871 AAA lid domain LH59_17880 PF02861 Clp amino terminal domain, pathogenicity island component LH59_17880 PF10431 C-terminal, D2-small domain, of ClpB protein LH59_17885 PF00905 Penicillin binding protein transpeptidase domain LH59_17885 PF00912 Transglycosylase LH59_17885 PF06832 Penicillin-Binding Protein C-terminus Family LH59_17890 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain LH59_17890 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain LH59_17890 PF01835 MG2 domain LH59_17890 PF07703 Alpha-2-macroglobulin bait region domain LH59_17890 PF17962 Bacterial macroglobulin domain 6 LH59_17890 PF00207 Alpha-2-macroglobulin family LH59_17890 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain LH59_17890 PF11974 Bacterial alpha-2-macroglobulin MG3 domain LH59_17895 PF02617 ATP-dependent Clp protease adaptor protein ClpS LH59_17900 PF00313 'Cold-shock' DNA-binding domain LH59_17910 PF00108 Thiolase, N-terminal domain LH59_17910 PF02803 Thiolase, C-terminal domain LH59_17915 PF00654 Voltage gated chloride channel LH59_17920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LH59_17920 PF02203 Tar ligand binding domain homologue LH59_17920 PF00672 HAMP domain LH59_17925 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LH59_17925 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LH59_17935 PF13742 OB-fold nucleic acid binding domain LH59_17935 PF02601 Exonuclease VII, large subunit LH59_17940 PF01618 MotA/TolQ/ExbB proton channel family LH59_17950 PF02606 Tetraacyldisaccharide-1-P 4'-kinase LH59_17955 PF07095 Intracellular growth attenuator protein IgaA LH59_17960 PF03966 Trm112p-like protein LH59_17965 PF02348 Cytidylyltransferase LH59_17970 PF05191 Adenylate kinase, active site lid LH59_17975 PF00106 short chain dehydrogenase LH59_17980 PF03023 Lipid II flippase MurJ LH59_17990 PF01649 Ribosomal protein S20 LH59_17995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_17995 PF03466 LysR substrate binding domain LH59_18000 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LH59_18000 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LH59_18005 PF03328 HpcH/HpaI aldolase/citrate lyase family LH59_18010 PF03401 Tripartite tricarboxylate transporter family receptor LH59_18015 PF02615 Malate/L-lactate dehydrogenase LH59_18020 PF07729 FCD domain LH59_18020 PF00392 Bacterial regulatory proteins, gntR family LH59_18030 PF03401 Tripartite tricarboxylate transporter family receptor LH59_18035 PF03401 Tripartite tricarboxylate transporter family receptor LH59_18040 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LH59_18040 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LH59_18055 PF18073 Rubredoxin metal binding domain LH59_18075 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LH59_18080 PF00171 Aldehyde dehydrogenase family LH59_18085 PF01557 Fumarylacetoacetate (FAA) hydrolase family LH59_18090 PF01557 Fumarylacetoacetate (FAA) hydrolase family LH59_18095 PF01557 Fumarylacetoacetate (FAA) hydrolase family LH59_18100 PF03328 HpcH/HpaI aldolase/citrate lyase family LH59_18110 PF00842 Alanine racemase, C-terminal domain LH59_18110 PF01168 Alanine racemase, N-terminal domain LH59_18130 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LH59_18150 PF03466 LysR substrate binding domain LH59_18150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_18160 PF09370 Phosphoenolpyruvate hydrolase-like LH59_18190 PF17871 AAA lid domain LH59_18190 PF02861 Clp amino terminal domain, pathogenicity island component LH59_18190 PF10431 C-terminal, D2-small domain, of ClpB protein LH59_18190 PF00004 ATPase family associated with various cellular activities (AAA) LH59_18190 PF07724 AAA domain (Cdc48 subfamily) LH59_18200 PF00027 Cyclic nucleotide-binding domain LH59_18200 PF13545 Crp-like helix-turn-helix domain LH59_18210 PF00083 Sugar (and other) transporter LH59_18225 PF00293 NUDIX domain LH59_18230 PF03466 LysR substrate binding domain LH59_18230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_18235 PF00012 Hsp70 protein LH59_18250 PF07715 TonB-dependent Receptor Plug Domain LH59_18250 PF00593 TonB dependent receptor LH59_18255 PF00593 TonB dependent receptor LH59_18255 PF07715 TonB-dependent Receptor Plug Domain LH59_18260 PF12833 Helix-turn-helix domain LH59_18265 PF01965 DJ-1/PfpI family LH59_18270 PF07690 Major Facilitator Superfamily LH59_18280 PF12843 Putative quorum-sensing-regulated virulence factor LH59_18285 PF00857 Isochorismatase family LH59_18295 PF13417 Glutathione S-transferase, N-terminal domain LH59_18295 PF00043 Glutathione S-transferase, C-terminal domain LH59_18310 PF03401 Tripartite tricarboxylate transporter family receptor LH59_18315 PF04909 Amidohydrolase LH59_18320 PF03401 Tripartite tricarboxylate transporter family receptor LH59_18325 PF03737 Aldolase/RraA LH59_18330 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LH59_18330 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LH59_18340 PF03401 Tripartite tricarboxylate transporter family receptor LH59_18345 PF03401 Tripartite tricarboxylate transporter family receptor LH59_18365 PF09723 Zinc ribbon domain LH59_18370 PF03069 Acetamidase/Formamidase family LH59_18390 PF01037 Lrp/AsnC ligand binding domain LH59_18390 PF13404 AsnC-type helix-turn-helix domain LH59_18400 PF00005 ABC transporter LH59_18400 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LH59_18405 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LH59_18410 PF00528 Binding-protein-dependent transport system inner membrane component LH59_18425 PF03352 Methyladenine glycosylase LH59_18425 PF13673 Acetyltransferase (GNAT) domain LH59_18425 PF13302 Acetyltransferase (GNAT) domain LH59_18425 PF00117 Glutamine amidotransferase class-I LH59_18425 PF00958 GMP synthase C terminal domain LH59_18430 PF00958 GMP synthase C terminal domain LH59_18430 PF03352 Methyladenine glycosylase LH59_18430 PF13302 Acetyltransferase (GNAT) domain LH59_18430 PF00117 Glutamine amidotransferase class-I LH59_18430 PF13673 Acetyltransferase (GNAT) domain LH59_18455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_18455 PF03466 LysR substrate binding domain LH59_18460 PF00962 Adenosine/AMP deaminase LH59_18465 PF00135 Carboxylesterase family LH59_18470 PF03401 Tripartite tricarboxylate transporter family receptor LH59_18475 PF17754 MftR C-terminal domain LH59_18475 PF00440 Bacterial regulatory proteins, tetR family LH59_18480 PF07690 Major Facilitator Superfamily LH59_18485 PF07687 Peptidase dimerisation domain LH59_18485 PF01546 Peptidase family M20/M25/M40 LH59_18500 PF01958 Domain of unknown function DUF108 LH59_18500 PF03447 Homoserine dehydrogenase, NAD binding domain LH59_18505 PF00005 ABC transporter LH59_18505 PF06472 ABC transporter transmembrane region 2 LH59_18520 PF03401 Tripartite tricarboxylate transporter family receptor LH59_18525 PF03707 Bacterial signalling protein N terminal repeat LH59_18525 PF00990 Diguanylate cyclase, GGDEF domain LH59_18525 PF00563 EAL domain LH59_18530 PF01479 S4 domain LH59_18535 PF03976 Polyphosphate kinase 2 (PPK2) LH59_18550 PF01053 Cys/Met metabolism PLP-dependent enzyme LH59_18555 PF00528 Binding-protein-dependent transport system inner membrane component LH59_18560 PF00005 ABC transporter LH59_18560 PF09383 NIL domain LH59_18565 PF03180 NLPA lipoprotein LH59_18575 PF07690 Major Facilitator Superfamily LH59_18585 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LH59_18585 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LH59_18590 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LH59_18590 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LH59_18600 PF01266 FAD dependent oxidoreductase LH59_18610 PF02567 Phenazine biosynthesis-like protein LH59_18615 PF00392 Bacterial regulatory proteins, gntR family LH59_18615 PF00155 Aminotransferase class I and II LH59_18620 PF00175 Oxidoreductase NAD-binding domain LH59_18620 PF00111 2Fe-2S iron-sulfur cluster binding domain LH59_18620 PF00970 Oxidoreductase FAD-binding domain LH59_18630 PF04261 Dyp-type peroxidase family LH59_18660 PF00350 Dynamin family LH59_18685 PF07728 AAA domain (dynein-related subfamily) LH59_18695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_18695 PF03466 LysR substrate binding domain LH59_18700 PF07690 Major Facilitator Superfamily LH59_18705 PF12833 Helix-turn-helix domain LH59_18705 PF02805 Metal binding domain of Ada LH59_18715 PF18029 Glyoxalase-like domain LH59_18725 PF10503 Esterase PHB depolymerase LH59_18735 PF03006 Haemolysin-III related LH59_18745 PF00313 'Cold-shock' DNA-binding domain LH59_18775 PF00355 Rieske [2Fe-2S] domain LH59_18775 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LH59_18790 PF00550 Phosphopantetheine attachment site LH59_18790 PF02801 Beta-ketoacyl synthase, C-terminal domain LH59_18790 PF00109 Beta-ketoacyl synthase, N-terminal domain LH59_18790 PF16197 Ketoacyl-synthetase C-terminal extension LH59_18790 PF08659 KR domain LH59_18790 PF14765 Polyketide synthase dehydratase LH59_18790 PF08240 Alcohol dehydrogenase GroES-like domain LH59_18790 PF00698 Acyl transferase domain LH59_18805 PF03480 Bacterial extracellular solute-binding protein, family 7 LH59_18815 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LH59_18820 PF00072 Response regulator receiver domain LH59_18820 PF00196 Bacterial regulatory proteins, luxR family LH59_18830 PF00108 Thiolase, N-terminal domain LH59_18830 PF02803 Thiolase, C-terminal domain LH59_18840 PF13417 Glutathione S-transferase, N-terminal domain LH59_18845 PF01061 ABC-2 type transporter LH59_18850 PF00005 ABC transporter LH59_18855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LH59_18855 PF07730 Histidine kinase LH59_18855 PF05231 MASE1 LH59_18860 PF00072 Response regulator receiver domain LH59_18860 PF00196 Bacterial regulatory proteins, luxR family LH59_18865 PF00005 ABC transporter LH59_18870 PF00528 Binding-protein-dependent transport system inner membrane component LH59_18875 PF00005 ABC transporter LH59_18880 PF02560 Cyanate lyase C-terminal domain LH59_18885 PF08543 Phosphomethylpyrimidine kinase LH59_18900 PF00639 PPIC-type PPIASE domain LH59_18900 PF09312 SurA N-terminal domain LH59_18925 PF02472 Biopolymer transport protein ExbD/TolR LH59_18930 PF01618 MotA/TolQ/ExbB proton channel family LH59_18990 PF08671 Anti-repressor SinI LH59_18990 PF01381 Helix-turn-helix LH59_18995 PF00596 Class II Aldolase and Adducin N-terminal domain LH59_19005 PF03401 Tripartite tricarboxylate transporter family receptor LH59_19035 PF03401 Tripartite tricarboxylate transporter family receptor LH59_19040 PF00583 Acetyltransferase (GNAT) family LH59_19040 PF13380 CoA binding domain LH59_19040 PF13607 Succinyl-CoA ligase like flavodoxin domain LH59_19045 PF00378 Enoyl-CoA hydratase/isomerase LH59_19060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_19060 PF03466 LysR substrate binding domain LH59_19075 PF17151 Periplasmic sensor domain LH59_19075 PF00990 Diguanylate cyclase, GGDEF domain LH59_19080 PF03797 Autotransporter beta-domain LH59_19100 PF00905 Penicillin binding protein transpeptidase domain LH59_19105 PF01757 Acyltransferase family LH59_19120 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LH59_19135 PF06628 Catalase-related immune-responsive LH59_19135 PF18011 C-terminal domain found in long catalases LH59_19135 PF00199 Catalase LH59_19150 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LH59_19155 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component LH59_19160 PF03480 Bacterial extracellular solute-binding protein, family 7 LH59_19170 PF00356 Bacterial regulatory proteins, lacI family LH59_19180 PF03480 Bacterial extracellular solute-binding protein, family 7 LH59_19185 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LH59_19195 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain LH59_19195 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain LH59_19200 PF17042 Nucleotide-binding C-terminal domain LH59_19200 PF07005 Sugar-binding N-terminal domain LH59_19210 PF00117 Glutamine amidotransferase class-I LH59_19210 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LH59_19215 PF00155 Aminotransferase class I and II LH59_19215 PF00392 Bacterial regulatory proteins, gntR family LH59_19225 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain LH59_19225 PF01276 Orn/Lys/Arg decarboxylase, major domain LH59_19225 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LH59_19235 PF13478 XdhC Rossmann domain LH59_19235 PF02625 XdhC and CoxI family LH59_19240 PF00132 Bacterial transferase hexapeptide (six repeats) LH59_19240 PF14602 Hexapeptide repeat of succinyl-transferase LH59_19240 PF12804 MobA-like NTP transferase domain LH59_19245 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LH59_19250 PF00111 2Fe-2S iron-sulfur cluster binding domain LH59_19250 PF01799 [2Fe-2S] binding domain LH59_19260 PF00392 Bacterial regulatory proteins, gntR family LH59_19260 PF00155 Aminotransferase class I and II LH59_19275 PF02567 Phenazine biosynthesis-like protein LH59_19360 PF01699 Sodium/calcium exchanger protein LH59_19365 PF03372 Endonuclease/Exonuclease/phosphatase family LH59_19370 PF13091 PLD-like domain LH59_19375 PF03706 Lysylphosphatidylglycerol synthase TM region LH59_19385 PF00128 Alpha amylase, catalytic domain LH59_19385 PF11896 Domain of unknown function (DUF3416) LH59_19390 PF00128 Alpha amylase, catalytic domain LH59_19390 PF16657 Maltogenic Amylase, C-terminal domain LH59_19395 PF02806 Alpha amylase, C-terminal all-beta domain LH59_19395 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LH59_19395 PF00128 Alpha amylase, catalytic domain LH59_19400 PF00128 Alpha amylase, catalytic domain LH59_19400 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LH59_19405 PF11941 Domain of unknown function (DUF3459) LH59_19405 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LH59_19405 PF00128 Alpha amylase, catalytic domain LH59_19410 PF02446 4-alpha-glucanotransferase LH59_19415 PF00128 Alpha amylase, catalytic domain LH59_19420 PF00324 Amino acid permease LH59_19425 PF13298 DNA polymerase Ligase (LigD) LH59_19425 PF01068 ATP dependent DNA ligase domain LH59_19425 PF04679 ATP dependent DNA ligase C terminal region LH59_19430 PF02735 Ku70/Ku80 beta-barrel domain LH59_19435 PF02464 Competence-damaged protein LH59_19435 PF18146 Damage-inducible protein CinA KH domain LH59_19435 PF00994 Probable molybdopterin binding domain LH59_19445 PF07687 Peptidase dimerisation domain LH59_19445 PF01546 Peptidase family M20/M25/M40 LH59_19455 PF00202 Aminotransferase class-III LH59_19460 PF00155 Aminotransferase class I and II LH59_19460 PF00392 Bacterial regulatory proteins, gntR family LH59_19465 PF00083 Sugar (and other) transporter LH59_19465 PF07690 Major Facilitator Superfamily LH59_19505 PF13545 Crp-like helix-turn-helix domain LH59_19505 PF00027 Cyclic nucleotide-binding domain LH59_19515 PF00196 Bacterial regulatory proteins, luxR family LH59_19540 PF09339 IclR helix-turn-helix domain LH59_19540 PF01614 Bacterial transcriptional regulator LH59_19545 PF01557 Fumarylacetoacetate (FAA) hydrolase family LH59_19560 PF08666 SAF domain LH59_19560 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus LH59_19565 PF00528 Binding-protein-dependent transport system inner membrane component LH59_19570 PF00528 Binding-protein-dependent transport system inner membrane component LH59_19575 PF00005 ABC transporter LH59_19585 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LH59_19585 PF13378 Enolase C-terminal domain-like LH59_19590 PF05199 GMC oxidoreductase LH59_19590 PF00732 GMC oxidoreductase LH59_19595 PF08501 Shikimate dehydrogenase substrate binding domain LH59_19595 PF01488 Shikimate / quinate 5-dehydrogenase LH59_19595 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LH59_19600 PF02779 Transketolase, pyrimidine binding domain LH59_19600 PF02780 Transketolase, C-terminal domain LH59_19605 PF00456 Transketolase, thiamine diphosphate binding domain LH59_19610 PF07729 FCD domain LH59_19610 PF00392 Bacterial regulatory proteins, gntR family LH59_19615 PF00465 Iron-containing alcohol dehydrogenase LH59_19620 PF05853 beta-keto acid cleavage enzyme LH59_19625 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LH59_19625 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LH59_19635 PF13458 Periplasmic binding protein LH59_19640 PF02653 Branched-chain amino acid transport system / permease component LH59_19645 PF12399 Branched-chain amino acid ATP-binding cassette transporter LH59_19645 PF00005 ABC transporter LH59_19650 PF00005 ABC transporter LH59_19655 PF00109 Beta-ketoacyl synthase, N-terminal domain LH59_19655 PF14765 Polyketide synthase dehydratase LH59_19655 PF00698 Acyl transferase domain LH59_19655 PF08240 Alcohol dehydrogenase GroES-like domain LH59_19655 PF00107 Zinc-binding dehydrogenase LH59_19655 PF16197 Ketoacyl-synthetase C-terminal extension LH59_19655 PF02801 Beta-ketoacyl synthase, C-terminal domain LH59_19655 PF08659 KR domain LH59_19655 PF00550 Phosphopantetheine attachment site LH59_19665 PF07715 TonB-dependent Receptor Plug Domain LH59_19665 PF00593 TonB dependent receptor LH59_19675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_19675 PF03466 LysR substrate binding domain LH59_19680 PF03401 Tripartite tricarboxylate transporter family receptor LH59_19685 PF13193 AMP-binding enzyme C-terminal domain LH59_19685 PF00501 AMP-binding enzyme LH59_19695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_19695 PF03466 LysR substrate binding domain LH59_19700 PF00330 Aconitase family (aconitate hydratase) LH59_19700 PF00694 Aconitase C-terminal domain LH59_19705 PF00691 OmpA family LH59_19705 PF01389 OmpA-like transmembrane domain LH59_19710 PF03466 LysR substrate binding domain LH59_19710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_19720 PF13533 Biotin-lipoyl like LH59_19725 PF07690 Major Facilitator Superfamily LH59_19735 PF03466 LysR substrate binding domain LH59_19735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_19740 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LH59_19755 PF08207 Elongation factor P (EF-P) KOW-like domain LH59_19755 PF09285 Elongation factor P, C-terminal LH59_19755 PF01132 Elongation factor P (EF-P) OB domain LH59_19770 PF00158 Sigma-54 interaction domain LH59_19770 PF00072 Response regulator receiver domain LH59_19770 PF02954 Bacterial regulatory protein, Fis family LH59_19800 PF00437 Type II/IV secretion system protein LH59_19810 PF04972 BON domain LH59_19810 PF00263 Bacterial type II and III secretion system protein LH59_19810 PF13629 Pilus formation protein N terminal region LH59_19840 PF03707 Bacterial signalling protein N terminal repeat LH59_19840 PF00990 Diguanylate cyclase, GGDEF domain LH59_19840 PF00563 EAL domain LH59_19845 PF08479 POTRA domain, ShlB-type LH59_19845 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB LH59_19855 PF01047 MarR family LH59_19860 PF00005 ABC transporter LH59_19860 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LH59_19865 PF12911 N-terminal TM domain of oligopeptide transport permease C LH59_19865 PF00528 Binding-protein-dependent transport system inner membrane component LH59_19870 PF00528 Binding-protein-dependent transport system inner membrane component LH59_19885 PF01544 CorA-like Mg2+ transporter protein LH59_19890 PF13361 UvrD-like helicase C-terminal domain LH59_19890 PF00580 UvrD/REP helicase N-terminal domain LH59_19900 PF00392 Bacterial regulatory proteins, gntR family LH59_19900 PF00155 Aminotransferase class I and II LH59_19905 PF00202 Aminotransferase class-III LH59_19910 PF00171 Aldehyde dehydrogenase family LH59_19915 PF00459 Inositol monophosphatase family LH59_19920 PF02146 Sir2 family LH59_19925 PF00132 Bacterial transferase hexapeptide (six repeats) LH59_19930 PF16363 GDP-mannose 4,6 dehydratase LH59_19935 PF00342 Phosphoglucose isomerase LH59_19940 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LH59_19940 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LH59_19940 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LH59_19940 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LH59_19945 PF02706 Chain length determinant protein LH59_19945 PF13807 G-rich domain on putative tyrosine kinase LH59_19945 PF13614 AAA domain LH59_19950 PF02563 Polysaccharide biosynthesis/export protein LH59_19950 PF10531 SLBB domain LH59_19955 PF02397 Bacterial sugar transferase LH59_19960 PF00293 NUDIX domain LH59_19965 PF01050 Mannose-6-phosphate isomerase LH59_19965 PF00483 Nucleotidyl transferase LH59_19975 PF16363 GDP-mannose 4,6 dehydratase LH59_19980 PF01370 NAD dependent epimerase/dehydratase family LH59_19995 PF00535 Glycosyl transferase family 2 LH59_20005 PF00534 Glycosyl transferases group 1 LH59_20005 PF13439 Glycosyltransferase Family 4 LH59_20010 PF00535 Glycosyl transferase family 2 LH59_20015 PF00132 Bacterial transferase hexapeptide (six repeats) LH59_20020 PF13579 Glycosyl transferase 4-like domain LH59_20020 PF00534 Glycosyl transferases group 1 LH59_20025 PF00072 Response regulator receiver domain LH59_20025 PF00196 Bacterial regulatory proteins, luxR family LH59_20030 PF00072 Response regulator receiver domain LH59_20030 PF00196 Bacterial regulatory proteins, luxR family LH59_20040 PF00440 Bacterial regulatory proteins, tetR family LH59_20040 PF08361 MAATS-type transcriptional repressor, C-terminal region LH59_20045 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LH59_20045 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LH59_20045 PF09317 Domain of unknown function (DUF1974) LH59_20050 PF00108 Thiolase, N-terminal domain LH59_20050 PF02803 Thiolase, C-terminal domain LH59_20055 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LH59_20055 PF00378 Enoyl-CoA hydratase/isomerase LH59_20055 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LH59_20065 PF00378 Enoyl-CoA hydratase/isomerase LH59_20065 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LH59_20065 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LH59_20070 PF00108 Thiolase, N-terminal domain LH59_20070 PF02803 Thiolase, C-terminal domain LH59_20085 PF00501 AMP-binding enzyme LH59_20085 PF13193 AMP-binding enzyme C-terminal domain LH59_20095 PF03401 Tripartite tricarboxylate transporter family receptor LH59_20105 PF00005 ABC transporter LH59_20105 PF00664 ABC transporter transmembrane region LH59_20110 PF03812 2-keto-3-deoxygluconate permease LH59_20115 PF07005 Sugar-binding N-terminal domain LH59_20115 PF17042 Nucleotide-binding C-terminal domain LH59_20120 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LH59_20135 PF01144 Coenzyme A transferase LH59_20140 PF00378 Enoyl-CoA hydratase/isomerase LH59_20145 PF02515 CoA-transferase family III LH59_20150 PF01614 Bacterial transcriptional regulator LH59_20150 PF09339 IclR helix-turn-helix domain LH59_20155 PF05995 Cysteine dioxygenase type I LH59_20160 PF02146 Sir2 family LH59_20180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_20180 PF03466 LysR substrate binding domain LH59_20200 PF12857 TOBE-like domain LH59_20200 PF00005 ABC transporter LH59_20205 PF00440 Bacterial regulatory proteins, tetR family LH59_20205 PF17932 Tetracyclin repressor-like, C-terminal domain LH59_20210 PF04185 Phosphoesterase family LH59_20215 PF00293 NUDIX domain LH59_20220 PF00581 Rhodanese-like domain LH59_20235 PF09456 RcsC Alpha-Beta-Loop (ABL) LH59_20235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LH59_20235 PF00512 His Kinase A (phospho-acceptor) domain LH59_20235 PF00072 Response regulator receiver domain LH59_20240 PF03707 Bacterial signalling protein N terminal repeat LH59_20240 PF00990 Diguanylate cyclase, GGDEF domain LH59_20240 PF00563 EAL domain LH59_20245 PF09456 RcsC Alpha-Beta-Loop (ABL) LH59_20245 PF00512 His Kinase A (phospho-acceptor) domain LH59_20245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LH59_20245 PF00072 Response regulator receiver domain LH59_20260 PF00034 Cytochrome c LH59_20270 PF00115 Cytochrome C and Quinol oxidase polypeptide I LH59_20290 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LH59_20290 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP LH59_20300 PF13840 ACT domain LH59_20300 PF01842 ACT domain LH59_20300 PF00696 Amino acid kinase family LH59_20305 PF09179 TilS substrate binding domain LH59_20305 PF01171 PP-loop family LH59_20310 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LH59_20320 PF09190 DALR domain LH59_20320 PF01406 tRNA synthetases class I (C) catalytic domain LH59_20335 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LH59_20340 PF00149 Calcineurin-like phosphoesterase LH59_20345 PF02673 Bacitracin resistance protein BacA LH59_20350 PF03741 Integral membrane protein TerC family LH59_20350 PF03471 Transporter associated domain LH59_20355 PF00127 Copper binding proteins, plastocyanin/azurin family LH59_20360 PF12801 4Fe-4S binding domain LH59_20360 PF04205 FMN-binding domain LH59_20365 PF13473 Cupredoxin-like domain LH59_20365 PF18764 Nitrous oxide reductase propeller repeat LH59_20365 PF18793 Nitrous oxide reductase propeller repeat 2 LH59_20370 PF05048 Periplasmic copper-binding protein (NosD) LH59_20375 PF00005 ABC transporter LH59_20380 PF12679 ABC-2 family transporter protein LH59_20390 PF02424 ApbE family LH59_20395 PF06250 YhcG PDDEXK nuclease domain LH59_20395 PF17761 DUF1016 N-terminal domain LH59_20400 PF00459 Inositol monophosphatase family LH59_20405 PF00588 SpoU rRNA Methylase family LH59_20410 PF03401 Tripartite tricarboxylate transporter family receptor LH59_20420 PF00924 Mechanosensitive ion channel LH59_20420 PF05552 Conserved TM helix LH59_20445 PF00083 Sugar (and other) transporter LH59_20460 PF09084 NMT1/THI5 like LH59_20465 PF00528 Binding-protein-dependent transport system inner membrane component LH59_20470 PF00005 ABC transporter LH59_20480 PF01425 Amidase LH59_20485 PF00392 Bacterial regulatory proteins, gntR family LH59_20485 PF07729 FCD domain LH59_20500 PF03358 NADPH-dependent FMN reductase LH59_20505 PF07311 Dodecin LH59_20515 PF03466 LysR substrate binding domain LH59_20515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_20520 PF00106 short chain dehydrogenase LH59_20525 PF08240 Alcohol dehydrogenase GroES-like domain LH59_20525 PF00107 Zinc-binding dehydrogenase LH59_20580 PF01624 MutS domain I LH59_20580 PF05188 MutS domain II LH59_20580 PF05192 MutS domain III LH59_20580 PF05190 MutS family domain IV LH59_20580 PF00488 MutS domain V LH59_20585 PF08007 Cupin superfamily protein LH59_20600 PF06804 NlpB/DapX lipoprotein LH59_20605 PF00701 Dihydrodipicolinate synthetase family LH59_20610 PF02163 Peptidase family M50 LH59_20615 PF01300 Telomere recombination LH59_20620 PF04228 Putative neutral zinc metallopeptidase LH59_20680 PF01588 Putative tRNA binding domain LH59_20685 PF01507 Phosphoadenosine phosphosulfate reductase family LH59_20685 PF11922 Domain of unknown function (DUF3440) LH59_20690 PF02195 ParB-like nuclease domain LH59_20695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LH59_20695 PF00512 His Kinase A (phospho-acceptor) domain LH59_20695 PF08521 Two-component sensor kinase N-terminal LH59_20700 PF00486 Transcriptional regulatory protein, C terminal LH59_20700 PF00072 Response regulator receiver domain LH59_20705 PF01925 Sulfite exporter TauE/SafE LH59_20715 PF13953 PapC C-terminal domain LH59_20715 PF00577 Outer membrane usher protein LH59_20715 PF13954 PapC N-terminal domain LH59_20720 PF02753 Pili assembly chaperone PapD, C-terminal domain LH59_20720 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LH59_20730 PF00082 Subtilase family LH59_20730 PF03797 Autotransporter beta-domain LH59_20750 PF07715 TonB-dependent Receptor Plug Domain LH59_20750 PF00593 TonB dependent receptor LH59_20760 PF00723 Glycosyl hydrolases family 15 LH59_20770 PF00700 Bacterial flagellin C-terminal helical region LH59_20770 PF00669 Bacterial flagellin N-terminal helical region LH59_20770 PF08884 Flagellin D3 domain LH59_20775 PF00672 HAMP domain LH59_20775 PF02203 Tar ligand binding domain homologue LH59_20775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LH59_20780 PF03401 Tripartite tricarboxylate transporter family receptor LH59_20785 PF01810 LysE type translocator LH59_20800 PF13091 PLD-like domain LH59_20815 PF01557 Fumarylacetoacetate (FAA) hydrolase family LH59_20820 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LH59_20820 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LH59_20835 PF00593 TonB dependent receptor LH59_20835 PF07715 TonB-dependent Receptor Plug Domain LH59_20845 PF04542 Sigma-70 region 2 LH59_20845 PF08281 Sigma-70, region 4 LH59_20860 PF00392 Bacterial regulatory proteins, gntR family LH59_20860 PF07729 FCD domain LH59_20865 PF03401 Tripartite tricarboxylate transporter family receptor LH59_20875 PF00595 PDZ domain LH59_20885 PF00578 AhpC/TSA family LH59_20885 PF17991 Thioredoxin like C-terminal domain LH59_20885 PF02683 Cytochrome C biogenesis protein transmembrane region LH59_20890 PF17991 Thioredoxin like C-terminal domain LH59_20890 PF02683 Cytochrome C biogenesis protein transmembrane region LH59_20890 PF00578 AhpC/TSA family LH59_20895 PF00486 Transcriptional regulatory protein, C terminal LH59_20895 PF00072 Response regulator receiver domain LH59_20900 PF00512 His Kinase A (phospho-acceptor) domain LH59_20900 PF00672 HAMP domain LH59_20900 PF16527 Two-component sensor protein CpxA, periplasmic domain LH59_20900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LH59_20905 PF02566 OsmC-like protein LH59_20910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_20910 PF03466 LysR substrate binding domain LH59_20915 PF00528 Binding-protein-dependent transport system inner membrane component LH59_20920 PF12911 N-terminal TM domain of oligopeptide transport permease C LH59_20920 PF00528 Binding-protein-dependent transport system inner membrane component LH59_20925 PF00005 ABC transporter LH59_20925 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LH59_20930 PF00005 ABC transporter LH59_20930 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LH59_20935 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LH59_20940 PF02129 X-Pro dipeptidyl-peptidase (S15 family) LH59_20940 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain LH59_20945 PF13609 Gram-negative porin LH59_20950 PF09335 SNARE associated Golgi protein LH59_20955 PF00155 Aminotransferase class I and II LH59_20955 PF00392 Bacterial regulatory proteins, gntR family LH59_20960 PF04229 GrpB protein LH59_21015 PF01266 FAD dependent oxidoreductase LH59_21020 PF00528 Binding-protein-dependent transport system inner membrane component LH59_21025 PF00528 Binding-protein-dependent transport system inner membrane component LH59_21030 PF00497 Bacterial extracellular solute-binding proteins, family 3 LH59_21035 PF00005 ABC transporter LH59_21040 PF00171 Aldehyde dehydrogenase family LH59_21050 PF00701 Dihydrodipicolinate synthetase family LH59_21055 PF13378 Enolase C-terminal domain-like LH59_21055 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LH59_21060 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LH59_21065 PF03401 Tripartite tricarboxylate transporter family receptor LH59_21070 PF03466 LysR substrate binding domain LH59_21070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_21085 PF13746 4Fe-4S dicluster domain LH59_21085 PF12801 4Fe-4S binding domain LH59_21085 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase LH59_21090 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP LH59_21090 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LH59_21105 PF00115 Cytochrome C and Quinol oxidase polypeptide I LH59_21120 PF00202 Aminotransferase class-III LH59_21125 PF00155 Aminotransferase class I and II LH59_21130 PF00561 alpha/beta hydrolase fold LH59_21135 PF13649 Methyltransferase domain LH59_21155 PF00463 Isocitrate lyase family LH59_21160 PF14489 QueF-like protein LH59_21160 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term LH59_21165 PF03150 Di-haem cytochrome c peroxidase LH59_21165 PF00034 Cytochrome c LH59_21170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_21170 PF03466 LysR substrate binding domain LH59_21175 PF00180 Isocitrate/isopropylmalate dehydrogenase LH59_21185 PF01066 CDP-alcohol phosphatidyltransferase LH59_21190 PF08459 UvrC Helix-hairpin-helix N-terminal LH59_21190 PF02151 UvrB/uvrC motif LH59_21190 PF01541 GIY-YIG catalytic domain LH59_21195 PF00933 Glycosyl hydrolase family 3 N terminal domain LH59_21200 PF01648 4'-phosphopantetheinyl transferase superfamily LH59_21205 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ LH59_21210 PF02321 Outer membrane efflux protein LH59_21215 PF00873 AcrB/AcrD/AcrF family LH59_21220 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LH59_21220 PF00529 HlyD membrane-fusion protein of T1SS LH59_21240 PF03459 TOBE domain LH59_21240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_21245 PF00005 ABC transporter LH59_21245 PF08402 TOBE domain LH59_21250 PF00528 Binding-protein-dependent transport system inner membrane component LH59_21260 PF02675 S-adenosylmethionine decarboxylase LH59_21295 PF01266 FAD dependent oxidoreductase LH59_21300 PF00005 ABC transporter LH59_21305 PF02653 Branched-chain amino acid transport system / permease component LH59_21315 PF00248 Aldo/keto reductase family LH59_21320 PF03401 Tripartite tricarboxylate transporter family receptor LH59_21325 PF13193 AMP-binding enzyme C-terminal domain LH59_21325 PF00501 AMP-binding enzyme LH59_21330 PF00378 Enoyl-CoA hydratase/isomerase LH59_21340 PF00392 Bacterial regulatory proteins, gntR family LH59_21340 PF07729 FCD domain LH59_21350 PF00108 Thiolase, N-terminal domain LH59_21350 PF02803 Thiolase, C-terminal domain LH59_21355 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LH59_21355 PF02770 Acyl-CoA dehydrogenase, middle domain LH59_21355 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LH59_21360 PF02770 Acyl-CoA dehydrogenase, middle domain LH59_21360 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LH59_21360 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LH59_21365 PF03466 LysR substrate binding domain LH59_21365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_21370 PF02515 CoA-transferase family III LH59_21380 PF03401 Tripartite tricarboxylate transporter family receptor LH59_21385 PF04966 Carbohydrate-selective porin, OprB family LH59_21390 PF13407 Periplasmic binding protein domain LH59_21395 PF00005 ABC transporter LH59_21400 PF02653 Branched-chain amino acid transport system / permease component LH59_21405 PF10282 Lactonase, 7-bladed beta-propeller LH59_21410 PF01370 NAD dependent epimerase/dehydratase family LH59_21415 PF00356 Bacterial regulatory proteins, lacI family LH59_21420 PF01361 Tautomerase enzyme LH59_21425 PF00005 ABC transporter LH59_21425 PF00571 CBS domain LH59_21430 PF00528 Binding-protein-dependent transport system inner membrane component LH59_21445 PF07690 Major Facilitator Superfamily LH59_21450 PF00830 Ribosomal L28 family LH59_21455 PF00471 Ribosomal protein L33 LH59_21460 PF13458 Periplasmic binding protein LH59_21470 PF00005 ABC transporter LH59_21470 PF12399 Branched-chain amino acid ATP-binding cassette transporter LH59_21475 PF01740 STAS domain LH59_21475 PF00916 Sulfate permease family LH59_21490 PF00768 D-alanyl-D-alanine carboxypeptidase LH59_21490 PF07943 Penicillin-binding protein 5, C-terminal domain LH59_21500 PF12802 MarR family LH59_21505 PF07690 Major Facilitator Superfamily LH59_21510 PF09334 tRNA synthetases class I (M) LH59_21510 PF08264 Anticodon-binding domain of tRNA LH59_21510 PF00133 tRNA synthetases class I (I, L, M and V) LH59_21510 PF13603 Leucyl-tRNA synthetase, Domain 2 LH59_21525 PF00171 Aldehyde dehydrogenase family LH59_21545 PF01425 Amidase LH59_21555 PF07690 Major Facilitator Superfamily LH59_21565 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LH59_21565 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LH59_21580 PF03466 LysR substrate binding domain LH59_21580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_21590 PF00596 Class II Aldolase and Adducin N-terminal domain LH59_21630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_21630 PF03466 LysR substrate binding domain LH59_21635 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain LH59_21635 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain LH59_21640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_21640 PF03466 LysR substrate binding domain LH59_21645 PF00924 Mechanosensitive ion channel LH59_21645 PF12794 Mechanosensitive ion channel inner membrane domain 1 LH59_21645 PF12795 Mechanosensitive ion channel porin domain LH59_21675 PF08447 PAS fold LH59_21675 PF13426 PAS domain LH59_21675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LH59_21695 PF00005 ABC transporter LH59_21695 PF08402 TOBE domain LH59_21700 PF00528 Binding-protein-dependent transport system inner membrane component LH59_21705 PF00528 Binding-protein-dependent transport system inner membrane component LH59_21710 PF05544 Proline racemase LH59_21725 PF00571 CBS domain LH59_21745 PF00330 Aconitase family (aconitate hydratase) LH59_21745 PF06434 Aconitate hydratase 2 N-terminus LH59_21745 PF11791 Aconitate B N-terminal domain LH59_21755 PF05724 Thiopurine S-methyltransferase (TPMT) LH59_21770 PF02469 Fasciclin domain LH59_21790 PF00248 Aldo/keto reductase family LH59_21795 PF06719 AraC-type transcriptional regulator N-terminus LH59_21795 PF12833 Helix-turn-helix domain LH59_21800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_21800 PF03466 LysR substrate binding domain LH59_21805 PF00857 Isochorismatase family LH59_21815 PF04325 Protein of unknown function (DUF465) LH59_21830 PF02627 Carboxymuconolactone decarboxylase family LH59_21835 PF13439 Glycosyltransferase Family 4 LH59_21835 PF00534 Glycosyl transferases group 1 LH59_21870 PF07690 Major Facilitator Superfamily LH59_21875 PF00005 ABC transporter LH59_21880 PF00528 Binding-protein-dependent transport system inner membrane component LH59_21885 PF00528 Binding-protein-dependent transport system inner membrane component LH59_21890 PF12849 PBP superfamily domain LH59_21895 PF13089 Polyphosphate kinase N-terminal domain LH59_21895 PF17941 Polyphosphate kinase C-terminal domain 1 LH59_21895 PF13090 Polyphosphate kinase C-terminal domain 2 LH59_21895 PF02503 Polyphosphate kinase middle domain LH59_21900 PF02541 Ppx/GppA phosphatase family LH59_21915 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LH59_21915 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LH59_21915 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LH59_21915 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LH59_21920 PF00809 Pterin binding enzyme LH59_21925 PF01434 Peptidase family M41 LH59_21925 PF17862 AAA+ lid domain LH59_21925 PF00004 ATPase family associated with various cellular activities (AAA) LH59_21925 PF06480 FtsH Extracellular LH59_21930 PF01728 FtsJ-like methyltransferase LH59_21935 PF01985 CRS1 / YhbY (CRM) domain LH59_21940 PF01272 Transcription elongation factor, GreA/GreB, C-term LH59_21940 PF03449 Transcription elongation factor, N-terminal LH59_21945 PF02203 Tar ligand binding domain homologue LH59_21945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LH59_21945 PF00672 HAMP domain LH59_21950 PF00860 Permease family LH59_21965 PF00528 Binding-protein-dependent transport system inner membrane component LH59_21970 PF00005 ABC transporter LH59_21970 PF08402 TOBE domain LH59_21975 PF03466 LysR substrate binding domain LH59_21975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_21980 PF00300 Histidine phosphatase superfamily (branch 1) LH59_21985 PF00106 short chain dehydrogenase LH59_21995 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LH59_21995 PF02142 MGS-like domain LH59_21995 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LH59_22000 PF00117 Glutamine amidotransferase class-I LH59_22000 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LH59_22005 PF00923 Transaldolase/Fructose-6-phosphate aldolase LH59_22015 PF01590 GAF domain LH59_22015 PF00512 His Kinase A (phospho-acceptor) domain LH59_22015 PF08446 PAS fold LH59_22015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LH59_22015 PF00360 Phytochrome region LH59_22020 PF00072 Response regulator receiver domain LH59_22020 PF00486 Transcriptional regulatory protein, C terminal LH59_22030 PF01126 Heme oxygenase LH59_22035 PF00528 Binding-protein-dependent transport system inner membrane component LH59_22040 PF00005 ABC transporter LH59_22050 PF02515 CoA-transferase family III LH59_22055 PF02132 RecR protein LH59_22055 PF13662 Toprim domain LH59_22060 PF02575 YbaB/EbfC DNA-binding family LH59_22080 PF12705 PD-(D/E)XK nuclease superfamily LH59_22080 PF00580 UvrD/REP helicase N-terminal domain LH59_22080 PF13361 UvrD-like helicase C-terminal domain LH59_22100 PF03060 Nitronate monooxygenase LH59_22115 PF03401 Tripartite tricarboxylate transporter family receptor LH59_22135 PF00682 HMGL-like LH59_22140 PF00501 AMP-binding enzyme LH59_22140 PF13193 AMP-binding enzyme C-terminal domain LH59_22145 PF00378 Enoyl-CoA hydratase/isomerase LH59_22155 PF00768 D-alanyl-D-alanine carboxypeptidase LH59_22165 PF08240 Alcohol dehydrogenase GroES-like domain LH59_22165 PF00107 Zinc-binding dehydrogenase LH59_22170 PF01174 SNO glutamine amidotransferase family LH59_22175 PF04073 Aminoacyl-tRNA editing domain LH59_22180 PF02899 Phage integrase, N-terminal SAM-like domain LH59_22180 PF00589 Phage integrase family LH59_22185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_22185 PF03466 LysR substrate binding domain LH59_22190 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LH59_22190 PF00205 Thiamine pyrophosphate enzyme, central domain LH59_22190 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LH59_22195 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LH59_22195 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LH59_22195 PF02770 Acyl-CoA dehydrogenase, middle domain LH59_22235 PF01202 Shikimate kinase LH59_22250 PF13193 AMP-binding enzyme C-terminal domain LH59_22250 PF00501 AMP-binding enzyme LH59_22265 PF02653 Branched-chain amino acid transport system / permease component LH59_22275 PF00005 ABC transporter LH59_22275 PF12399 Branched-chain amino acid ATP-binding cassette transporter LH59_22280 PF00005 ABC transporter LH59_22285 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LH59_22285 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LH59_22290 PF00497 Bacterial extracellular solute-binding proteins, family 3 LH59_22295 PF03401 Tripartite tricarboxylate transporter family receptor LH59_22300 PF01144 Coenzyme A transferase LH59_22305 PF01144 Coenzyme A transferase LH59_22310 PF09339 IclR helix-turn-helix domain LH59_22310 PF01614 Bacterial transcriptional regulator LH59_22315 PF03481 Putative GTP-binding controlling metal-binding LH59_22315 PF01300 Telomere recombination LH59_22320 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LH59_22320 PF02222 ATP-grasp domain LH59_22325 PF00731 AIR carboxylase LH59_22330 PF02600 Disulfide bond formation protein DsbB LH59_22340 PF01259 SAICAR synthetase LH59_22350 PF01116 Fructose-bisphosphate aldolase class-II LH59_22360 PF00375 Sodium:dicarboxylate symporter family LH59_22370 PF07969 Amidohydrolase family LH59_22375 PF00005 ABC transporter LH59_22380 PF00005 ABC transporter LH59_22385 PF06007 Phosphonate metabolism protein PhnJ LH59_22390 PF05861 Bacterial phosphonate metabolism protein (PhnI) LH59_22395 PF05845 Bacterial phosphonate metabolism protein (PhnH) LH59_22400 PF06754 Phosphonate metabolism protein PhnG LH59_22405 PF00392 Bacterial regulatory proteins, gntR family LH59_22405 PF07702 UTRA domain LH59_22410 PF07969 Amidohydrolase family LH59_22415 PF06299 Protein of unknown function (DUF1045) LH59_22425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_22425 PF03466 LysR substrate binding domain LH59_22435 PF03401 Tripartite tricarboxylate transporter family receptor LH59_22445 PF00528 Binding-protein-dependent transport system inner membrane component LH59_22455 PF00005 ABC transporter LH59_22465 PF01022 Bacterial regulatory protein, arsR family LH59_22475 PF01176 Translation initiation factor 1A / IF-1 LH59_22485 PF01551 Peptidase family M23 LH59_22485 PF08525 Opacity-associated protein A N-terminal motif LH59_22485 PF01476 LysM domain LH59_22495 PF00994 Probable molybdopterin binding domain LH59_22510 PF01384 Phosphate transporter family LH59_22530 PF00226 DnaJ domain LH59_22530 PF01556 DnaJ C terminal domain LH59_22535 PF00583 Acetyltransferase (GNAT) family LH59_22545 PF14834 Glutathione S-transferase, C-terminal domain LH59_22545 PF02798 Glutathione S-transferase, N-terminal domain LH59_22555 PF11339 Protein of unknown function (DUF3141) LH59_22560 PF01515 Phosphate acetyl/butaryl transferase LH59_22565 PF00871 Acetokinase family LH59_22575 PF00916 Sulfate permease family LH59_22575 PF01740 STAS domain LH59_22580 PF03401 Tripartite tricarboxylate transporter family receptor LH59_22585 PF00162 Phosphoglycerate kinase LH59_22590 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LH59_22590 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LH59_22595 PF00456 Transketolase, thiamine diphosphate binding domain LH59_22595 PF02780 Transketolase, C-terminal domain LH59_22595 PF02779 Transketolase, pyrimidine binding domain LH59_22605 PF04452 RNA methyltransferase LH59_22610 PF01337 Barstar (barnase inhibitor) LH59_22620 PF01515 Phosphate acetyl/butaryl transferase LH59_22620 PF03949 Malic enzyme, NAD binding domain LH59_22620 PF00390 Malic enzyme, N-terminal domain LH59_22630 PF00155 Aminotransferase class I and II LH59_22645 PF01464 Transglycosylase SLT domain LH59_22645 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain LH59_22650 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase LH59_22665 PF05957 Bacterial protein of unknown function (DUF883) LH59_22675 PF00005 ABC transporter LH59_22680 PF00528 Binding-protein-dependent transport system inner membrane component LH59_22690 PF14824 Sirohaem biosynthesis protein central LH59_22690 PF10414 Sirohaem synthase dimerisation region LH59_22690 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LH59_22700 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family LH59_22705 PF13458 Periplasmic binding protein LH59_22710 PF01613 Flavin reductase like domain LH59_22715 PF00296 Luciferase-like monooxygenase LH59_22725 PF02547 Queuosine biosynthesis protein LH59_22730 PF01702 Queuine tRNA-ribosyltransferase LH59_22735 PF02699 Preprotein translocase subunit LH59_22740 PF07549 SecD/SecF GG Motif LH59_22740 PF02355 Protein export membrane protein LH59_22740 PF13721 SecD export protein N-terminal TM region LH59_22745 PF02355 Protein export membrane protein LH59_22745 PF07549 SecD/SecF GG Motif LH59_22765 PF02272 DHHA1 domain LH59_22765 PF01411 tRNA synthetases class II (A) LH59_22765 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LH59_22775 PF04055 Radical SAM superfamily LH59_22775 PF01938 TRAM domain LH59_22775 PF00919 Uncharacterized protein family UPF0004 LH59_22780 PF02562 PhoH-like protein LH59_22785 PF02130 Uncharacterized protein family UPF0054 LH59_22790 PF00571 CBS domain LH59_22790 PF03471 Transporter associated domain LH59_22795 PF00795 Carbon-nitrogen hydrolase LH59_22800 PF00248 Aldo/keto reductase family LH59_22835 PF00196 Bacterial regulatory proteins, luxR family LH59_22840 PF04055 Radical SAM superfamily LH59_22840 PF06968 Biotin and Thiamin Synthesis associated domain LH59_22855 PF08534 Redoxin LH59_22865 PF01738 Dienelactone hydrolase family LH59_22875 PF01967 MoaC family LH59_22885 PF02391 MoaE protein LH59_22890 PF00994 Probable molybdopterin binding domain LH59_22895 PF00994 Probable molybdopterin binding domain LH59_22895 PF03454 MoeA C-terminal region (domain IV) LH59_22895 PF03453 MoeA N-terminal region (domain I and II) LH59_22900 PF12804 MobA-like NTP transferase domain LH59_22905 PF06463 Molybdenum Cofactor Synthesis C LH59_22905 PF04055 Radical SAM superfamily LH59_22920 PF00037 4Fe-4S binding domain LH59_22920 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LH59_22920 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LH59_22925 PF01568 Molydopterin dinucleotide binding domain LH59_22925 PF00384 Molybdopterin oxidoreductase LH59_22925 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LH59_22925 PF12838 4Fe-4S dicluster domain LH59_22925 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LH59_22930 PF02634 FdhD/NarQ family LH59_22940 PF07690 Major Facilitator Superfamily LH59_22945 PF05175 Methyltransferase small domain LH59_22965 PF03466 LysR substrate binding domain LH59_22965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_22970 PF01177 Asp/Glu/Hydantoin racemase LH59_22975 PF00582 Universal stress protein family LH59_22980 PF00582 Universal stress protein family LH59_22985 PF00672 HAMP domain LH59_22985 PF00512 His Kinase A (phospho-acceptor) domain LH59_22985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LH59_22990 PF00486 Transcriptional regulatory protein, C terminal LH59_22990 PF00072 Response regulator receiver domain LH59_23005 PF00970 Oxidoreductase FAD-binding domain LH59_23005 PF00111 2Fe-2S iron-sulfur cluster binding domain LH59_23005 PF00175 Oxidoreductase NAD-binding domain LH59_23010 PF07995 Glucose / Sorbosone dehydrogenase LH59_23015 PF00127 Copper binding proteins, plastocyanin/azurin family LH59_23035 PF03401 Tripartite tricarboxylate transporter family receptor LH59_23040 PF04303 PrpF protein LH59_23045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_23045 PF03466 LysR substrate binding domain LH59_23050 PF00583 Acetyltransferase (GNAT) family LH59_23060 PF04542 Sigma-70 region 2 LH59_23060 PF08281 Sigma-70, region 4 LH59_23075 PF02785 Biotin carboxylase C-terminal domain LH59_23075 PF00364 Biotin-requiring enzyme LH59_23075 PF00289 Biotin carboxylase, N-terminal domain LH59_23075 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LH59_23075 PF02785 Biotin carboxylase C-terminal domain LH59_23075 PF00289 Biotin carboxylase, N-terminal domain LH59_23075 PF00364 Biotin-requiring enzyme LH59_23075 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LH59_23080 PF01425 Amidase LH59_23095 PF02653 Branched-chain amino acid transport system / permease component LH59_23105 PF12399 Branched-chain amino acid ATP-binding cassette transporter LH59_23105 PF00005 ABC transporter LH59_23110 PF00005 ABC transporter LH59_23120 PF00593 TonB dependent receptor LH59_23120 PF07715 TonB-dependent Receptor Plug Domain LH59_23130 PF03960 ArsC family LH59_23135 PF00072 Response regulator receiver domain LH59_23135 PF00196 Bacterial regulatory proteins, luxR family LH59_23140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LH59_23140 PF13492 GAF domain LH59_23140 PF07730 Histidine kinase LH59_23150 PF01569 PAP2 superfamily LH59_23155 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LH59_23155 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LH59_23160 PF12833 Helix-turn-helix domain LH59_23160 PF02805 Metal binding domain of Ada LH59_23160 PF00730 HhH-GPD superfamily base excision DNA repair protein LH59_23160 PF06029 AlkA N-terminal domain LH59_23165 PF04461 Protein of unknown function (DUF520) LH59_23170 PF00005 ABC transporter LH59_23175 PF01032 FecCD transport family LH59_23180 PF01497 Periplasmic binding protein LH59_23185 PF05171 Haemin-degrading HemS.ChuX domain LH59_23195 PF16220 Domain of unknown function (DUF4880) LH59_23195 PF04773 FecR protein LH59_23200 PF08281 Sigma-70, region 4 LH59_23200 PF04542 Sigma-70 region 2 LH59_23220 PF13280 WYL domain LH59_23220 PF08279 HTH domain LH59_23235 PF03466 LysR substrate binding domain LH59_23235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_23245 PF03466 LysR substrate binding domain LH59_23245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_23250 PF00324 Amino acid permease LH59_23255 PF00266 Aminotransferase class-V LH59_23260 PF01037 Lrp/AsnC ligand binding domain LH59_23265 PF03006 Haemolysin-III related LH59_23270 PF03576 Peptidase family S58 LH59_23275 PF00497 Bacterial extracellular solute-binding proteins, family 3 LH59_23280 PF00528 Binding-protein-dependent transport system inner membrane component LH59_23290 PF01476 LysM domain LH59_23290 PF01551 Peptidase family M23 LH59_23310 PF02630 SCO1/SenC LH59_23325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LH59_23325 PF00512 His Kinase A (phospho-acceptor) domain LH59_23330 PF00072 Response regulator receiver domain LH59_23335 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LH59_23335 PF06481 COX Aromatic Rich Motif LH59_23340 PF00115 Cytochrome C and Quinol oxidase polypeptide I LH59_23345 PF00510 Cytochrome c oxidase subunit III LH59_23350 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LH59_23355 PF04891 NifQ LH59_23360 PF07715 TonB-dependent Receptor Plug Domain LH59_23360 PF00593 TonB dependent receptor LH59_23365 PF04102 SlyX LH59_23380 PF03949 Malic enzyme, NAD binding domain LH59_23380 PF00390 Malic enzyme, N-terminal domain LH59_23380 PF01515 Phosphate acetyl/butaryl transferase LH59_23395 PF00892 EamA-like transporter family LH59_23415 PF03466 LysR substrate binding domain LH59_23415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_23440 PF03466 LysR substrate binding domain LH59_23440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_23445 PF00561 alpha/beta hydrolase fold LH59_23460 PF07883 Cupin domain LH59_23460 PF01381 Helix-turn-helix LH59_23465 PF13091 PLD-like domain LH59_23470 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA LH59_23475 PF13532 2OG-Fe(II) oxygenase superfamily LH59_23505 PF04209 homogentisate 1,2-dioxygenase LH59_23510 PF02308 MgtC family LH59_23520 PF13419 Haloacid dehalogenase-like hydrolase LH59_23530 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA LH59_23545 PF00593 TonB dependent receptor LH59_23545 PF07715 TonB-dependent Receptor Plug Domain LH59_23550 PF16220 Domain of unknown function (DUF4880) LH59_23550 PF04773 FecR protein LH59_23555 PF04542 Sigma-70 region 2 LH59_23555 PF08281 Sigma-70, region 4 LH59_23560 PF00593 TonB dependent receptor LH59_23560 PF07715 TonB-dependent Receptor Plug Domain LH59_23580 PF00990 Diguanylate cyclase, GGDEF domain LH59_23580 PF00563 EAL domain LH59_23580 PF13426 PAS domain LH59_23585 PF01145 SPFH domain / Band 7 family LH59_23605 PF16485 Protealysin propeptide LH59_23605 PF01447 Thermolysin metallopeptidase, catalytic domain LH59_23605 PF02868 Thermolysin metallopeptidase, alpha-helical domain LH59_23615 PF07690 Major Facilitator Superfamily LH59_23620 PF12833 Helix-turn-helix domain LH59_23620 PF02311 AraC-like ligand binding domain LH59_23635 PF03741 Integral membrane protein TerC family LH59_23640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_23640 PF03466 LysR substrate binding domain LH59_23665 PF07715 TonB-dependent Receptor Plug Domain LH59_23665 PF00593 TonB dependent receptor LH59_23670 PF04773 FecR protein LH59_23670 PF16220 Domain of unknown function (DUF4880) LH59_23685 PF00850 Histone deacetylase domain LH59_23695 PF00202 Aminotransferase class-III LH59_23700 PF00497 Bacterial extracellular solute-binding proteins, family 3 LH59_23705 PF07690 Major Facilitator Superfamily LH59_23705 PF00083 Sugar (and other) transporter LH59_23710 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LH59_23710 PF06481 COX Aromatic Rich Motif LH59_23715 PF00115 Cytochrome C and Quinol oxidase polypeptide I LH59_23720 PF00510 Cytochrome c oxidase subunit III LH59_23725 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LH59_23735 PF13609 Gram-negative porin LH59_23740 PF13609 Gram-negative porin LH59_23750 PF07690 Major Facilitator Superfamily LH59_23765 PF02798 Glutathione S-transferase, N-terminal domain LH59_23790 PF00072 Response regulator receiver domain LH59_23790 PF00196 Bacterial regulatory proteins, luxR family LH59_23800 PF04185 Phosphoesterase family LH59_23800 PF05506 Domain of unknown function (DUF756) LH59_23815 PF08376 Nitrate and nitrite sensing LH59_23815 PF03861 ANTAR domain LH59_23820 PF04324 BFD-like [2Fe-2S] binding domain LH59_23820 PF13806 Rieske-like [2Fe-2S] domain LH59_23820 PF07992 Pyridine nucleotide-disulphide oxidoreductase LH59_23820 PF18267 Rubredoxin NAD+ reductase C-terminal domain LH59_23820 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LH59_23820 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LH59_23825 PF18267 Rubredoxin NAD+ reductase C-terminal domain LH59_23825 PF13806 Rieske-like [2Fe-2S] domain LH59_23825 PF07992 Pyridine nucleotide-disulphide oxidoreductase LH59_23825 PF04324 BFD-like [2Fe-2S] binding domain LH59_23825 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LH59_23825 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LH59_23835 PF00248 Aldo/keto reductase family LH59_23850 PF00248 Aldo/keto reductase family LH59_23855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_23855 PF03466 LysR substrate binding domain LH59_23860 PF01253 Translation initiation factor SUI1 LH59_23870 PF00583 Acetyltransferase (GNAT) family LH59_23875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_23875 PF03466 LysR substrate binding domain LH59_23880 PF13378 Enolase C-terminal domain-like LH59_23895 PF00672 HAMP domain LH59_23895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LH59_23895 PF02203 Tar ligand binding domain homologue LH59_23900 PF13185 GAF domain LH59_23900 PF00990 Diguanylate cyclase, GGDEF domain LH59_23905 PF01022 Bacterial regulatory protein, arsR family LH59_23915 PF00574 Clp protease LH59_23920 PF07690 Major Facilitator Superfamily LH59_23930 PF07690 Major Facilitator Superfamily LH59_23940 PF01965 DJ-1/PfpI family LH59_23945 PF03401 Tripartite tricarboxylate transporter family receptor LH59_23950 PF00701 Dihydrodipicolinate synthetase family LH59_23955 PF00384 Molybdopterin oxidoreductase LH59_23955 PF01568 Molydopterin dinucleotide binding domain LH59_23960 PF12697 Alpha/beta hydrolase family LH59_23965 PF13673 Acetyltransferase (GNAT) domain LH59_23970 PF00581 Rhodanese-like domain LH59_23975 PF07690 Major Facilitator Superfamily LH59_23980 PF01842 ACT domain LH59_23980 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LH59_23980 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LH59_23985 PF03466 LysR substrate binding domain LH59_23985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_23995 PF00596 Class II Aldolase and Adducin N-terminal domain LH59_24020 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LH59_24020 PF00205 Thiamine pyrophosphate enzyme, central domain LH59_24020 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LH59_24040 PF01545 Cation efflux family LH59_24045 PF02583 Metal-sensitive transcriptional repressor LH59_24055 PF00664 ABC transporter transmembrane region LH59_24055 PF04954 Siderophore-interacting protein LH59_24055 PF08021 Siderophore-interacting FAD-binding domain LH59_24055 PF00005 ABC transporter LH59_24060 PF00005 ABC transporter LH59_24060 PF00664 ABC transporter transmembrane region LH59_24070 PF08494 DEAD/H associated LH59_24070 PF00270 DEAD/DEAH box helicase LH59_24070 PF00271 Helicase conserved C-terminal domain LH59_24075 PF04679 ATP dependent DNA ligase C terminal region LH59_24075 PF04675 DNA ligase N terminus LH59_24075 PF01068 ATP dependent DNA ligase domain LH59_24080 PF04675 DNA ligase N terminus LH59_24080 PF01068 ATP dependent DNA ligase domain LH59_24080 PF04679 ATP dependent DNA ligase C terminal region LH59_24110 PF13098 Thioredoxin-like domain LH59_24120 PF02770 Acyl-CoA dehydrogenase, middle domain LH59_24120 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LH59_24120 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LH59_24125 PF03401 Tripartite tricarboxylate transporter family receptor LH59_24130 PF02515 CoA-transferase family III LH59_24135 PF00892 EamA-like transporter family LH59_24140 PF07687 Peptidase dimerisation domain LH59_24140 PF01546 Peptidase family M20/M25/M40 LH59_24145 PF03401 Tripartite tricarboxylate transporter family receptor LH59_24160 PF03466 LysR substrate binding domain LH59_24160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_24165 PF03466 LysR substrate binding domain LH59_24165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_24195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_24195 PF03466 LysR substrate binding domain LH59_24205 PF03401 Tripartite tricarboxylate transporter family receptor LH59_24210 PF13378 Enolase C-terminal domain-like LH59_24225 PF00501 AMP-binding enzyme LH59_24225 PF13193 AMP-binding enzyme C-terminal domain LH59_24245 PF01323 DSBA-like thioredoxin domain LH59_24250 PF03466 LysR substrate binding domain LH59_24250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_24270 PF08281 Sigma-70, region 4 LH59_24270 PF04542 Sigma-70 region 2 LH59_24280 PF07715 TonB-dependent Receptor Plug Domain LH59_24280 PF07660 Secretin and TonB N terminus short domain LH59_24280 PF00593 TonB dependent receptor LH59_24295 PF00166 Chaperonin 10 Kd subunit LH59_24300 PF00118 TCP-1/cpn60 chaperonin family LH59_24310 PF01047 MarR family LH59_24315 PF00171 Aldehyde dehydrogenase family LH59_24320 PF01042 Endoribonuclease L-PSP LH59_24325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_24325 PF03466 LysR substrate binding domain LH59_24330 PF06052 3-hydroxyanthranilic acid dioxygenase LH59_24355 PF12399 Branched-chain amino acid ATP-binding cassette transporter LH59_24355 PF00005 ABC transporter LH59_24360 PF00005 ABC transporter LH59_24370 PF01219 Prokaryotic diacylglycerol kinase LH59_24375 PF07992 Pyridine nucleotide-disulphide oxidoreductase LH59_24380 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LH59_24385 PF02464 Competence-damaged protein LH59_24395 PF02769 AIR synthase related protein, C-terminal domain LH59_24395 PF00586 AIR synthase related protein, N-terminal domain LH59_24400 PF01029 NusB family LH59_24405 PF00885 6,7-dimethyl-8-ribityllumazine synthase LH59_24410 PF00925 GTP cyclohydrolase II LH59_24410 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LH59_24430 PF00005 ABC transporter LH59_24435 PF00528 Binding-protein-dependent transport system inner membrane component LH59_24440 PF00528 Binding-protein-dependent transport system inner membrane component LH59_24445 PF03797 Autotransporter beta-domain LH59_24445 PF12951 Passenger-associated-transport-repeat LH59_24445 PF00082 Subtilase family LH59_24455 PF02881 SRP54-type protein, helical bundle domain LH59_24455 PF00448 SRP54-type protein, GTPase domain LH59_24465 PF01467 Cytidylyltransferase-like LH59_24470 PF00037 4Fe-4S binding domain LH59_24475 PF03594 Benzoate membrane transport protein LH59_24490 PF07690 Major Facilitator Superfamily LH59_24510 PF00593 TonB dependent receptor LH59_24510 PF07715 TonB-dependent Receptor Plug Domain LH59_24515 PF17761 DUF1016 N-terminal domain LH59_24515 PF06250 YhcG PDDEXK nuclease domain LH59_24520 PF01926 50S ribosome-binding GTPase LH59_24520 PF06071 Protein of unknown function (DUF933) LH59_24530 PF01195 Peptidyl-tRNA hydrolase LH59_24535 PF14693 Ribosomal protein TL5, C-terminal domain LH59_24535 PF01386 Ribosomal L25p family LH59_24540 PF14572 Phosphoribosyl synthetase-associated domain LH59_24540 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LH59_24550 PF00288 GHMP kinases N terminal domain LH59_24550 PF08544 GHMP kinases C terminal LH59_24555 PF02203 Tar ligand binding domain homologue LH59_24555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LH59_24555 PF00672 HAMP domain LH59_24560 PF03550 Outer membrane lipoprotein LolB LH59_24570 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LH59_24570 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LH59_24570 PF06827 Zinc finger found in FPG and IleRS LH59_24580 PF01494 FAD binding domain LH59_24590 PF03466 LysR substrate binding domain LH59_24590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_24595 PF04209 homogentisate 1,2-dioxygenase LH59_24605 PF01553 Acyltransferase LH59_24610 PF00884 Sulfatase LH59_24615 PF07729 FCD domain LH59_24615 PF00392 Bacterial regulatory proteins, gntR family LH59_24620 PF01370 NAD dependent epimerase/dehydratase family LH59_24625 PF08450 SMP-30/Gluconolactonase/LRE-like region LH59_24630 PF03480 Bacterial extracellular solute-binding protein, family 7 LH59_24640 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LH59_24650 PF00512 His Kinase A (phospho-acceptor) domain LH59_24650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LH59_24650 PF00672 HAMP domain LH59_24655 PF00072 Response regulator receiver domain LH59_24655 PF00486 Transcriptional regulatory protein, C terminal LH59_24660 PF01565 FAD binding domain LH59_24660 PF02913 FAD linked oxidases, C-terminal domain LH59_24670 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LH59_24670 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LH59_24670 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LH59_24670 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LH59_24675 PF00342 Phosphoglucose isomerase LH59_24685 PF00534 Glycosyl transferases group 1 LH59_24685 PF13477 Glycosyl transferase 4-like LH59_24690 PF00534 Glycosyl transferases group 1 LH59_24690 PF13439 Glycosyltransferase Family 4 LH59_24695 PF13439 Glycosyltransferase Family 4 LH59_24695 PF00534 Glycosyl transferases group 1 LH59_24700 PF13537 Glutamine amidotransferase domain LH59_24700 PF00733 Asparagine synthase LH59_24705 PF00534 Glycosyl transferases group 1 LH59_24710 PF03023 Lipid II flippase MurJ LH59_24715 PF01370 NAD dependent epimerase/dehydratase family LH59_24720 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LH59_24720 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LH59_24720 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LH59_24725 PF00953 Glycosyl transferase family 4 LH59_24730 PF03232 Ubiquinone biosynthesis protein COQ7 LH59_24740 PF00303 Thymidylate synthase LH59_24745 PF00990 Diguanylate cyclase, GGDEF domain LH59_24745 PF03707 Bacterial signalling protein N terminal repeat LH59_24745 PF00563 EAL domain LH59_24750 PF00186 Dihydrofolate reductase LH59_24755 PF00155 Aminotransferase class I and II LH59_24760 PF00202 Aminotransferase class-III LH59_24765 PF00171 Aldehyde dehydrogenase family LH59_24775 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LH59_24780 PF00528 Binding-protein-dependent transport system inner membrane component LH59_24785 PF00528 Binding-protein-dependent transport system inner membrane component LH59_24790 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LH59_24790 PF00005 ABC transporter LH59_24795 PF01425 Amidase LH59_24815 PF02347 Glycine cleavage system P-protein LH59_24820 PF01597 Glycine cleavage H-protein LH59_24825 PF08669 Glycine cleavage T-protein C-terminal barrel domain LH59_24825 PF01571 Aminomethyltransferase folate-binding domain LH59_24830 PF02535 ZIP Zinc transporter LH59_24835 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LH59_24835 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LH59_24850 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain LH59_24850 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LH59_24850 PF01276 Orn/Lys/Arg decarboxylase, major domain LH59_24865 PF08448 PAS fold LH59_24865 PF00990 Diguanylate cyclase, GGDEF domain LH59_24875 PF00692 dUTPase LH59_24890 PF10609 NUBPL iron-transfer P-loop NTPase LH59_24900 PF01588 Putative tRNA binding domain LH59_24900 PF09334 tRNA synthetases class I (M) LH59_24920 PF01757 Acyltransferase family LH59_24930 PF00072 Response regulator receiver domain LH59_24930 PF00486 Transcriptional regulatory protein, C terminal LH59_24935 PF02254 TrkA-N domain LH59_24935 PF07885 Ion channel LH59_24940 PF13698 Domain of unknown function (DUF4156) LH59_24960 PF00563 EAL domain LH59_24960 PF12792 CSS motif domain associated with EAL LH59_24965 PF00440 Bacterial regulatory proteins, tetR family LH59_24980 PF13533 Biotin-lipoyl like LH59_24985 PF00005 ABC transporter LH59_25000 PF00106 short chain dehydrogenase LH59_25005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_25005 PF03466 LysR substrate binding domain LH59_25010 PF00892 EamA-like transporter family LH59_25015 PF01654 Cytochrome bd terminal oxidase subunit I LH59_25020 PF02322 Cytochrome bd terminal oxidase subunit II LH59_25030 PF00155 Aminotransferase class I and II LH59_25030 PF00392 Bacterial regulatory proteins, gntR family LH59_25045 PF03401 Tripartite tricarboxylate transporter family receptor LH59_25060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_25060 PF03466 LysR substrate binding domain LH59_25065 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LH59_25070 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LH59_25070 PF00034 Cytochrome c LH59_25075 PF00043 Glutathione S-transferase, C-terminal domain LH59_25075 PF02798 Glutathione S-transferase, N-terminal domain LH59_25080 PF00221 Aromatic amino acid lyase LH59_25085 PF12706 Beta-lactamase superfamily domain LH59_25090 PF07690 Major Facilitator Superfamily LH59_25095 PF17391 Urocanase N-terminal domain LH59_25095 PF01175 Urocanase Rossmann-like domain LH59_25095 PF17392 Urocanase C-terminal domain LH59_25105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_25105 PF03466 LysR substrate binding domain LH59_25110 PF01979 Amidohydrolase family LH59_25115 PF07687 Peptidase dimerisation domain LH59_25115 PF01546 Peptidase family M20/M25/M40 LH59_25140 PF00444 Ribosomal protein L36 LH59_25150 PF00330 Aconitase family (aconitate hydratase) LH59_25150 PF00694 Aconitase C-terminal domain LH59_25155 PF04303 PrpF protein LH59_25160 PF04542 Sigma-70 region 2 LH59_25160 PF08281 Sigma-70, region 4 LH59_25165 PF04773 FecR protein LH59_25165 PF16220 Domain of unknown function (DUF4880) LH59_25170 PF07715 TonB-dependent Receptor Plug Domain LH59_25170 PF07660 Secretin and TonB N terminus short domain LH59_25170 PF00593 TonB dependent receptor LH59_25175 PF14698 Argininosuccinate lyase C-terminal LH59_25175 PF00206 Lyase LH59_25180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LH59_25180 PF00672 HAMP domain LH59_25180 PF00512 His Kinase A (phospho-acceptor) domain LH59_25190 PF01494 FAD binding domain LH59_25215 PF14497 Glutathione S-transferase, C-terminal domain LH59_25215 PF02798 Glutathione S-transferase, N-terminal domain LH59_25220 PF07690 Major Facilitator Superfamily LH59_25220 PF00083 Sugar (and other) transporter LH59_25235 PF05853 beta-keto acid cleavage enzyme LH59_25250 PF04055 Radical SAM superfamily LH59_25255 PF03737 Aldolase/RraA LH59_25260 PF01425 Amidase LH59_25265 PF00285 Citrate synthase, C-terminal domain LH59_25270 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LH59_25270 PF13378 Enolase C-terminal domain-like LH59_25275 PF03401 Tripartite tricarboxylate transporter family receptor LH59_25285 PF01425 Amidase LH59_25310 PF03401 Tripartite tricarboxylate transporter family receptor LH59_25315 PF00682 HMGL-like LH59_25320 PF02515 CoA-transferase family III LH59_25325 PF03466 LysR substrate binding domain LH59_25325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_25330 PF02390 Putative methyltransferase LH59_25335 PF00561 alpha/beta hydrolase fold LH59_25340 PF02597 ThiS family LH59_25340 PF05690 Thiazole biosynthesis protein ThiG LH59_25355 PF01476 LysM domain LH59_25355 PF04972 BON domain LH59_25360 PF02978 Signal peptide binding domain LH59_25360 PF02881 SRP54-type protein, helical bundle domain LH59_25360 PF00448 SRP54-type protein, GTPase domain LH59_25365 PF01578 Cytochrome C assembly protein LH59_25375 PF01510 N-acetylmuramoyl-L-alanine amidase LH59_25380 PF00043 Glutathione S-transferase, C-terminal domain LH59_25380 PF13417 Glutathione S-transferase, N-terminal domain LH59_25400 PF01370 NAD dependent epimerase/dehydratase family LH59_25405 PF00171 Aldehyde dehydrogenase family LH59_25410 PF03466 LysR substrate binding domain LH59_25410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_25415 PF02321 Outer membrane efflux protein LH59_25420 PF00529 HlyD membrane-fusion protein of T1SS LH59_25425 PF00005 ABC transporter LH59_25425 PF00664 ABC transporter transmembrane region LH59_25445 PF13657 HipA N-terminal domain LH59_25445 PF07804 HipA-like C-terminal domain LH59_25465 PF09339 IclR helix-turn-helix domain LH59_25465 PF01614 Bacterial transcriptional regulator LH59_25475 PF01081 KDPG and KHG aldolase LH59_25480 PF13378 Enolase C-terminal domain-like LH59_25480 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LH59_25485 PF07690 Major Facilitator Superfamily LH59_25490 PF00005 ABC transporter LH59_25505 PF00593 TonB dependent receptor LH59_25505 PF07715 TonB-dependent Receptor Plug Domain LH59_25510 PF07690 Major Facilitator Superfamily LH59_25515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LH59_25515 PF00183 Hsp90 protein LH59_25525 PF00860 Permease family LH59_25545 PF00497 Bacterial extracellular solute-binding proteins, family 3 LH59_25550 PF05698 Bacterial trigger factor protein (TF) C-terminus LH59_25555 PF05853 beta-keto acid cleavage enzyme LH59_25570 PF03466 LysR substrate binding domain LH59_25570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_25690 PF03466 LysR substrate binding domain LH59_25690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_25695 PF08021 Siderophore-interacting FAD-binding domain LH59_25695 PF04954 Siderophore-interacting protein LH59_25700 PF03551 Transcriptional regulator PadR-like family LH59_25715 PF07690 Major Facilitator Superfamily LH59_25720 PF03807 NADP oxidoreductase coenzyme F420-dependent LH59_25720 PF14748 Pyrroline-5-carboxylate reductase dimerisation LH59_25725 PF01070 FMN-dependent dehydrogenase LH59_25730 PF02913 FAD linked oxidases, C-terminal domain LH59_25730 PF01565 FAD binding domain LH59_25740 PF08402 TOBE domain LH59_25740 PF00005 ABC transporter LH59_25745 PF00528 Binding-protein-dependent transport system inner membrane component LH59_25750 PF00701 Dihydrodipicolinate synthetase family LH59_25765 PF01594 AI-2E family transporter LH59_25770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_25770 PF03466 LysR substrate binding domain LH59_25775 PF13533 Biotin-lipoyl like LH59_25780 PF00873 AcrB/AcrD/AcrF family LH59_25785 PF02321 Outer membrane efflux protein LH59_25795 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) LH59_25805 PF07729 FCD domain LH59_25805 PF00392 Bacterial regulatory proteins, gntR family LH59_25815 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LH59_25815 PF01488 Shikimate / quinate 5-dehydrogenase LH59_25815 PF08501 Shikimate dehydrogenase substrate binding domain LH59_25820 PF13458 Periplasmic binding protein LH59_25825 PF02653 Branched-chain amino acid transport system / permease component LH59_25835 PF00005 ABC transporter LH59_25835 PF12399 Branched-chain amino acid ATP-binding cassette transporter LH59_25840 PF00005 ABC transporter LH59_25850 PF00676 Dehydrogenase E1 component LH59_25860 PF02817 e3 binding domain LH59_25860 PF00364 Biotin-requiring enzyme LH59_25860 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LH59_25865 PF07992 Pyridine nucleotide-disulphide oxidoreductase LH59_25865 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LH59_25870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_25870 PF03466 LysR substrate binding domain LH59_25875 PF00920 Dehydratase family LH59_25885 PF00682 HMGL-like LH59_25885 PF08502 LeuA allosteric (dimerisation) domain LH59_25890 PF03466 LysR substrate binding domain LH59_25890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_25905 PF12792 CSS motif domain associated with EAL LH59_25905 PF00563 EAL domain LH59_25910 PF06508 Queuosine biosynthesis protein QueC LH59_25915 PF00311 Phosphoenolpyruvate carboxylase LH59_25920 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LH59_25920 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LH59_25925 PF02667 Short chain fatty acid transporter LH59_25935 PF01614 Bacterial transcriptional regulator LH59_25935 PF09339 IclR helix-turn-helix domain LH59_25940 PF01144 Coenzyme A transferase LH59_25945 PF01144 Coenzyme A transferase LH59_25960 PF12146 Serine aminopeptidase, S33 LH59_25980 PF00484 Carbonic anhydrase LH59_25985 PF00392 Bacterial regulatory proteins, gntR family LH59_25985 PF07729 FCD domain LH59_26000 PF02653 Branched-chain amino acid transport system / permease component LH59_26005 PF11862 Domain of unknown function (DUF3382) LH59_26005 PF02653 Branched-chain amino acid transport system / permease component LH59_26010 PF12399 Branched-chain amino acid ATP-binding cassette transporter LH59_26010 PF00005 ABC transporter LH59_26015 PF00005 ABC transporter LH59_26035 PF13417 Glutathione S-transferase, N-terminal domain LH59_26035 PF00043 Glutathione S-transferase, C-terminal domain LH59_26050 PF03466 LysR substrate binding domain LH59_26050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_26060 PF03466 LysR substrate binding domain LH59_26060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_26065 PF07690 Major Facilitator Superfamily LH59_26070 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LH59_26070 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LH59_26085 PF03401 Tripartite tricarboxylate transporter family receptor LH59_26090 PF13193 AMP-binding enzyme C-terminal domain LH59_26090 PF00501 AMP-binding enzyme LH59_26105 PF03079 ARD/ARD' family LH59_26110 PF03180 NLPA lipoprotein LH59_26120 PF02441 Flavoprotein LH59_26125 PF00462 Glutaredoxin LH59_26130 PF17827 PrmC N-terminal domain LH59_26130 PF05175 Methyltransferase small domain LH59_26135 PF00472 RF-1 domain LH59_26135 PF03462 PCRF domain LH59_26140 PF01488 Shikimate / quinate 5-dehydrogenase LH59_26140 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LH59_26140 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LH59_26150 PF01810 LysE type translocator LH59_26155 PF01037 Lrp/AsnC ligand binding domain LH59_26165 PF00892 EamA-like transporter family LH59_26170 PF03401 Tripartite tricarboxylate transporter family receptor LH59_26175 PF01261 Xylose isomerase-like TIM barrel LH59_26180 PF00593 TonB dependent receptor LH59_26180 PF07715 TonB-dependent Receptor Plug Domain LH59_26190 PF07690 Major Facilitator Superfamily LH59_26195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_26195 PF03466 LysR substrate binding domain LH59_26200 PF07729 FCD domain LH59_26200 PF00392 Bacterial regulatory proteins, gntR family LH59_26205 PF07005 Sugar-binding N-terminal domain LH59_26205 PF17042 Nucleotide-binding C-terminal domain LH59_26210 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LH59_26210 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LH59_26215 PF01370 NAD dependent epimerase/dehydratase family LH59_26220 PF01261 Xylose isomerase-like TIM barrel LH59_26225 PF00596 Class II Aldolase and Adducin N-terminal domain LH59_26240 PF12697 Alpha/beta hydrolase family LH59_26260 PF08240 Alcohol dehydrogenase GroES-like domain LH59_26260 PF00107 Zinc-binding dehydrogenase LH59_26275 PF00795 Carbon-nitrogen hydrolase LH59_26295 PF00348 Polyprenyl synthetase LH59_26300 PF00829 Ribosomal prokaryotic L21 protein LH59_26305 PF01016 Ribosomal L27 protein LH59_26310 PF01926 50S ribosome-binding GTPase LH59_26310 PF01018 GTP1/OBG LH59_26315 PF01472 PUA domain LH59_26315 PF00696 Amino acid kinase family LH59_26330 PF07549 SecD/SecF GG Motif LH59_26330 PF02355 Protein export membrane protein LH59_26335 PF13667 ThiC-associated domain LH59_26335 PF01964 Radical SAM ThiC family LH59_26340 PF02913 FAD linked oxidases, C-terminal domain LH59_26340 PF01565 FAD binding domain LH59_26345 PF07729 FCD domain LH59_26345 PF00392 Bacterial regulatory proteins, gntR family LH59_26350 PF08447 PAS fold LH59_26350 PF08448 PAS fold LH59_26350 PF13426 PAS domain LH59_26350 PF00563 EAL domain LH59_26350 PF00990 Diguanylate cyclase, GGDEF domain LH59_26350 PF05231 MASE1 LH59_26355 PF00899 ThiF family LH59_26360 PF13180 PDZ domain LH59_26360 PF03572 Peptidase family S41 LH59_26365 PF01551 Peptidase family M23 LH59_26370 PF00300 Histidine phosphatase superfamily (branch 1) LH59_26380 PF00462 Glutaredoxin LH59_26385 PF02556 Preprotein translocase subunit SecB LH59_26390 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LH59_26390 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LH59_26395 PF03401 Tripartite tricarboxylate transporter family receptor LH59_26400 PF00588 SpoU rRNA Methylase family LH59_26405 PF00156 Phosphoribosyl transferase domain LH59_26410 PF08241 Methyltransferase domain LH59_26415 PF04107 Glutamate-cysteine ligase family 2(GCS2) LH59_26420 PF02386 Cation transport protein LH59_26425 PF02080 TrkA-C domain LH59_26425 PF02254 TrkA-N domain LH59_26430 PF02954 Bacterial regulatory protein, Fis family LH59_26430 PF00158 Sigma-54 interaction domain LH59_26430 PF00072 Response regulator receiver domain LH59_26435 PF00672 HAMP domain LH59_26435 PF00512 His Kinase A (phospho-acceptor) domain LH59_26435 PF00989 PAS fold LH59_26435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LH59_26445 PF01029 NusB family LH59_26445 PF01189 16S rRNA methyltransferase RsmB/F LH59_26450 PF01810 LysE type translocator LH59_26455 PF04055 Radical SAM superfamily LH59_26455 PF00919 Uncharacterized protein family UPF0004 LH59_26455 PF18693 TRAM domain LH59_26460 PF00893 Small Multidrug Resistance protein LH59_26465 PF01638 HxlR-like helix-turn-helix LH59_26475 PF03641 Possible lysine decarboxylase LH59_26485 PF13419 Haloacid dehalogenase-like hydrolase LH59_26495 PF00551 Formyl transferase LH59_26495 PF02911 Formyl transferase, C-terminal domain LH59_26500 PF01327 Polypeptide deformylase LH59_26505 PF02481 DNA recombination-mediator protein A LH59_26505 PF17782 DprA winged helix domain LH59_26510 PF00682 HMGL-like LH59_26520 PF00497 Bacterial extracellular solute-binding proteins, family 3 LH59_26525 PF00155 Aminotransferase class I and II LH59_26530 PF01168 Alanine racemase, N-terminal domain LH59_26535 PF03401 Tripartite tricarboxylate transporter family receptor LH59_26555 PF00291 Pyridoxal-phosphate dependent enzyme LH59_26555 PF00585 C-terminal regulatory domain of Threonine dehydratase LH59_26560 PF13609 Gram-negative porin LH59_26570 PF03466 LysR substrate binding domain LH59_26570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_26575 PF00156 Phosphoribosyl transferase domain LH59_26580 PF00664 ABC transporter transmembrane region LH59_26580 PF00005 ABC transporter LH59_26585 PF00664 ABC transporter transmembrane region LH59_26585 PF00005 ABC transporter LH59_26590 PF08173 Membrane bound YbgT-like protein LH59_26595 PF02322 Cytochrome bd terminal oxidase subunit II LH59_26600 PF01654 Cytochrome bd terminal oxidase subunit I LH59_26610 PF02222 ATP-grasp domain LH59_26615 PF00571 CBS domain LH59_26615 PF01380 SIS domain LH59_26635 PF00005 ABC transporter LH59_26640 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LH59_26645 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LH59_26650 PF07475 HPr Serine kinase C-terminal domain LH59_26650 PF02603 HPr Serine kinase N terminus LH59_26655 PF00155 Aminotransferase class I and II LH59_26655 PF00392 Bacterial regulatory proteins, gntR family LH59_26660 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LH59_26660 PF00034 Cytochrome c LH59_26670 PF03668 P-loop ATPase protein family LH59_26675 PF05036 Sporulation related domain LH59_26675 PF03330 Lytic transglycolase LH59_26680 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LH59_26680 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LH59_26685 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LH59_26690 PF02021 Uncharacterised protein family UPF0102 LH59_26695 PF13580 SIS domain LH59_26700 PF04972 BON domain LH59_26705 PF00578 AhpC/TSA family LH59_26710 PF03180 NLPA lipoprotein LH59_26715 PF00696 Amino acid kinase family LH59_26725 PF00440 Bacterial regulatory proteins, tetR family LH59_26730 PF00939 Sodium:sulfate symporter transmembrane region LH59_26735 PF02615 Malate/L-lactate dehydrogenase LH59_26740 PF01098 Cell cycle protein LH59_26745 PF03717 Penicillin-binding Protein dimerisation domain LH59_26745 PF00905 Penicillin binding protein transpeptidase domain LH59_26755 PF04085 rod shape-determining protein MreC LH59_26765 PF02686 Glu-tRNAGln amidotransferase C subunit LH59_26770 PF01425 Amidase LH59_26775 PF02637 GatB domain LH59_26775 PF02934 GatB/GatE catalytic domain LH59_26785 PF00156 Phosphoribosyl transferase domain LH59_26790 PF03372 Endonuclease/Exonuclease/phosphatase family LH59_26795 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LH59_26795 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LH59_26805 PF03466 LysR substrate binding domain LH59_26805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_26815 PF03466 LysR substrate binding domain LH59_26815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_26820 PF13458 Periplasmic binding protein LH59_26830 PF00005 ABC transporter LH59_26830 PF12399 Branched-chain amino acid ATP-binding cassette transporter LH59_26835 PF00005 ABC transporter LH59_26840 PF02566 OsmC-like protein LH59_26845 PF01047 MarR family LH59_26855 PF00501 AMP-binding enzyme LH59_26860 PF12399 Branched-chain amino acid ATP-binding cassette transporter LH59_26860 PF00005 ABC transporter LH59_26865 PF02653 Branched-chain amino acid transport system / permease component LH59_26885 PF00005 ABC transporter LH59_26890 PF00501 AMP-binding enzyme LH59_26890 PF14535 AMP-binding enzyme C-terminal domain LH59_26905 PF04143 Sulphur transport LH59_26915 PF00753 Metallo-beta-lactamase superfamily LH59_26920 PF03976 Polyphosphate kinase 2 (PPK2) LH59_26935 PF06965 Na+/H+ antiporter 1 LH59_26940 PF04343 Protein of unknown function, DUF488 LH59_26955 PF01520 N-acetylmuramoyl-L-alanine amidase LH59_26965 PF02581 Thiamine monophosphate synthase LH59_26965 PF08543 Phosphomethylpyrimidine kinase LH59_26965 PF03070 TENA/THI-4/PQQC family LH59_26975 PF00012 Hsp70 protein LH59_26985 PF15526 Novel toxin 21 LH59_26985 PF05594 Haemagluttinin repeat LH59_26985 PF13332 Hemagglutinin repeat LH59_26985 PF05860 haemagglutination activity domain LH59_26985 PF04829 Pre-toxin domain with VENN motif LH59_26990 PF08479 POTRA domain, ShlB-type LH59_26990 PF17287 POTRA domain LH59_26990 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB LH59_26995 PF03167 Uracil DNA glycosylase superfamily LH59_27000 PF00270 DEAD/DEAH box helicase LH59_27000 PF00271 Helicase conserved C-terminal domain LH59_27010 PF12627 Probable RNA and SrmB- binding site of polymerase A LH59_27010 PF01743 Poly A polymerase head domain LH59_27015 PF14718 Soluble lytic murein transglycosylase L domain LH59_27015 PF01464 Transglycosylase SLT domain LH59_27020 PF01812 5-formyltetrahydrofolate cyclo-ligase family LH59_27025 PF14403 Circularly permuted ATP-grasp type 2 LH59_27035 PF08379 Bacterial transglutaminase-like N-terminal region LH59_27035 PF01841 Transglutaminase-like superfamily LH59_27045 PF03401 Tripartite tricarboxylate transporter family receptor LH59_27055 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV LH59_27060 PF05221 S-adenosyl-L-homocysteine hydrolase LH59_27060 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain LH59_27065 PF13439 Glycosyltransferase Family 4 LH59_27065 PF00534 Glycosyl transferases group 1 LH59_27075 PF00561 alpha/beta hydrolase fold LH59_27080 PF00694 Aconitase C-terminal domain LH59_27085 PF00330 Aconitase family (aconitate hydratase) LH59_27090 PF03401 Tripartite tricarboxylate transporter family receptor LH59_27095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_27095 PF03466 LysR substrate binding domain LH59_27105 PF00083 Sugar (and other) transporter LH59_27110 PF01425 Amidase LH59_27115 PF02772 S-adenosylmethionine synthetase, central domain LH59_27115 PF00438 S-adenosylmethionine synthetase, N-terminal domain LH59_27115 PF02773 S-adenosylmethionine synthetase, C-terminal domain LH59_27130 PF01678 Diaminopimelate epimerase LH59_27140 PF02899 Phage integrase, N-terminal SAM-like domain LH59_27140 PF00589 Phage integrase family LH59_27145 PF03824 High-affinity nickel-transport protein LH59_27155 PF01297 Zinc-uptake complex component A periplasmic LH59_27160 PF00950 ABC 3 transport family LH59_27165 PF00005 ABC transporter LH59_27175 PF01475 Ferric uptake regulator family LH59_27180 PF02492 CobW/HypB/UreG, nucleotide-binding domain LH59_27180 PF07683 Cobalamin synthesis protein cobW C-terminal domain LH59_27185 PF01258 Prokaryotic dksA/traR C4-type zinc finger LH59_27190 PF00227 Proteasome subunit LH59_27195 PF00004 ATPase family associated with various cellular activities (AAA) LH59_27195 PF07724 AAA domain (Cdc48 subfamily) LH59_27205 PF01923 Cobalamin adenosyltransferase LH59_27210 PF04055 Radical SAM superfamily LH59_27210 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family LH59_27225 PF03099 Biotin/lipoate A/B protein ligase family LH59_27230 PF04359 Protein of unknown function (DUF493) LH59_27235 PF01063 Amino-transferase class IV LH59_27240 PF00768 D-alanyl-D-alanine carboxypeptidase LH59_27240 PF07943 Penicillin-binding protein 5, C-terminal domain LH59_27260 PF00005 ABC transporter LH59_27265 PF02405 Permease MlaE LH59_27275 PF03309 Type III pantothenate kinase LH59_27285 PF00534 Glycosyl transferases group 1 LH59_27285 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) LH59_27290 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LH59_27300 PF00132 Bacterial transferase hexapeptide (six repeats) LH59_27305 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LH59_27315 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LH59_27320 PF02397 Bacterial sugar transferase LH59_27325 PF00534 Glycosyl transferases group 1 LH59_27340 PF02719 Polysaccharide biosynthesis protein LH59_27350 PF13537 Glutamine amidotransferase domain LH59_27350 PF00733 Asparagine synthase LH59_27365 PF01370 NAD dependent epimerase/dehydratase family LH59_27370 PF13439 Glycosyltransferase Family 4 LH59_27370 PF00534 Glycosyl transferases group 1 LH59_27375 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LH59_27385 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LH59_27395 PF00009 Elongation factor Tu GTP binding domain LH59_27400 PF01507 Phosphoadenosine phosphosulfate reductase family LH59_27430 PF01209 ubiE/COQ5 methyltransferase family LH59_27445 PF00733 Asparagine synthase LH59_27445 PF13537 Glutamine amidotransferase domain LH59_27450 PF01370 NAD dependent epimerase/dehydratase family LH59_27460 PF07690 Major Facilitator Superfamily LH59_27465 PF00892 EamA-like transporter family LH59_27470 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LH59_27475 PF00483 Nucleotidyl transferase LH59_27480 PF16363 GDP-mannose 4,6 dehydratase LH59_27485 PF13091 PLD-like domain LH59_27490 PF03372 Endonuclease/Exonuclease/phosphatase family LH59_27495 PF00152 tRNA synthetases class II (D, K and N) LH59_27495 PF01336 OB-fold nucleic acid binding domain LH59_27495 PF02938 GAD domain LH59_27520 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LH59_27520 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LH59_27535 PF00701 Dihydrodipicolinate synthetase family LH59_27540 PF13185 GAF domain LH59_27545 PF00155 Aminotransferase class I and II LH59_27550 PF01040 UbiA prenyltransferase family LH59_27570 PF07729 FCD domain LH59_27570 PF00392 Bacterial regulatory proteins, gntR family LH59_27575 PF01274 Malate synthase LH59_27625 PF00436 Single-strand binding protein family LH59_27630 PF07690 Major Facilitator Superfamily LH59_27635 PF17755 UvrA DNA-binding domain LH59_27635 PF17760 UvrA interaction domain LH59_27640 PF02798 Glutathione S-transferase, N-terminal domain LH59_27640 PF14497 Glutathione S-transferase, C-terminal domain LH59_27645 PF01966 HD domain LH59_27645 PF13286 Phosphohydrolase-associated domain LH59_27650 PF01761 3-dehydroquinate synthase LH59_27655 PF01202 Shikimate kinase LH59_27660 PF17092 Penicillin-binding protein OB-like domain LH59_27660 PF00905 Penicillin binding protein transpeptidase domain LH59_27660 PF00912 Transglycosylase LH59_27665 PF01491 Frataxin-like domain LH59_27670 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LH59_27670 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LH59_27680 PF05140 ResB-like family LH59_27690 PF01926 50S ribosome-binding GTPase LH59_27695 PF00490 Delta-aminolevulinic acid dehydratase LH59_27705 PF11412 Disulphide bond corrector protein DsbC LH59_27705 PF02683 Cytochrome C biogenesis protein transmembrane region LH59_27710 PF03091 CutA1 divalent ion tolerance protein LH59_27715 PF01230 HIT domain LH59_27720 PF01196 Ribosomal protein L17 LH59_27725 PF01000 RNA polymerase Rpb3/RpoA insert domain LH59_27725 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LH59_27725 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LH59_27730 PF01479 S4 domain LH59_27730 PF00163 Ribosomal protein S4/S9 N-terminal domain LH59_27735 PF00411 Ribosomal protein S11 LH59_27740 PF00416 Ribosomal protein S13/S18 LH59_27745 PF01176 Translation initiation factor 1A / IF-1 LH59_27750 PF00344 SecY translocase LH59_27755 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LH59_27760 PF00327 Ribosomal protein L30p/L7e LH59_27765 PF03719 Ribosomal protein S5, C-terminal domain LH59_27765 PF00333 Ribosomal protein S5, N-terminal domain LH59_27770 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LH59_27775 PF00347 Ribosomal protein L6 LH59_27780 PF00410 Ribosomal protein S8 LH59_27785 PF00253 Ribosomal protein S14p/S29e LH59_27790 PF00673 ribosomal L5P family C-terminus LH59_27790 PF00281 Ribosomal protein L5 LH59_27795 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LH59_27800 PF00238 Ribosomal protein L14p/L23e LH59_27810 PF00171 Aldehyde dehydrogenase family LH59_27815 PF02805 Metal binding domain of Ada LH59_27815 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LH59_27815 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LH59_27815 PF12833 Helix-turn-helix domain LH59_27820 PF01053 Cys/Met metabolism PLP-dependent enzyme LH59_27825 PF12833 Helix-turn-helix domain LH59_27825 PF02311 AraC-like ligand binding domain LH59_27830 PF00561 alpha/beta hydrolase fold LH59_27840 PF12399 Branched-chain amino acid ATP-binding cassette transporter LH59_27840 PF00005 ABC transporter LH59_27845 PF00005 ABC transporter LH59_27850 PF02653 Branched-chain amino acid transport system / permease component LH59_27850 PF11862 Domain of unknown function (DUF3382) LH59_27865 PF00366 Ribosomal protein S17 LH59_27870 PF00831 Ribosomal L29 protein LH59_27875 PF00252 Ribosomal protein L16p/L10e LH59_27880 PF00189 Ribosomal protein S3, C-terminal domain LH59_27880 PF07650 KH domain LH59_27885 PF00237 Ribosomal protein L22p/L17e LH59_27890 PF00203 Ribosomal protein S19 LH59_27895 PF03947 Ribosomal Proteins L2, C-terminal domain LH59_27895 PF00181 Ribosomal Proteins L2, RNA binding domain LH59_27900 PF00276 Ribosomal protein L23 LH59_27905 PF00573 Ribosomal protein L4/L1 family LH59_27910 PF00297 Ribosomal protein L3 LH59_27915 PF00338 Ribosomal protein S10p/S20e LH59_27925 PF14492 Elongation Factor G, domain II LH59_27925 PF00679 Elongation factor G C-terminus LH59_27925 PF03764 Elongation factor G, domain IV LH59_27925 PF00009 Elongation factor Tu GTP binding domain LH59_27925 PF03144 Elongation factor Tu domain 2 LH59_27930 PF00177 Ribosomal protein S7p/S5e LH59_27935 PF00164 Ribosomal protein S12/S23 LH59_27940 PF00486 Transcriptional regulatory protein, C terminal LH59_27940 PF00072 Response regulator receiver domain LH59_27945 PF00486 Transcriptional regulatory protein, C terminal LH59_27945 PF00072 Response regulator receiver domain LH59_27955 PF00512 His Kinase A (phospho-acceptor) domain LH59_27955 PF00989 PAS fold LH59_27955 PF16736 Single Cache-like LH59_27955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LH59_27970 PF05000 RNA polymerase Rpb1, domain 4 LH59_27970 PF04983 RNA polymerase Rpb1, domain 3 LH59_27970 PF00623 RNA polymerase Rpb1, domain 2 LH59_27970 PF04997 RNA polymerase Rpb1, domain 1 LH59_27970 PF04998 RNA polymerase Rpb1, domain 5 LH59_27975 PF04565 RNA polymerase Rpb2, domain 3 LH59_27975 PF04561 RNA polymerase Rpb2, domain 2 LH59_27975 PF04563 RNA polymerase beta subunit LH59_27975 PF10385 RNA polymerase beta subunit external 1 domain LH59_27975 PF00562 RNA polymerase Rpb2, domain 6 LH59_27975 PF04560 RNA polymerase Rpb2, domain 7 LH59_27980 PF16320 Ribosomal protein L7/L12 dimerisation domain LH59_27980 PF00542 Ribosomal protein L7/L12 C-terminal domain LH59_27985 PF00466 Ribosomal protein L10 LH59_27990 PF00687 Ribosomal protein L1p/L10e family LH59_27995 PF03946 Ribosomal protein L11, N-terminal domain LH59_27995 PF00298 Ribosomal protein L11, RNA binding domain LH59_28000 PF00467 KOW motif LH59_28000 PF02357 Transcription termination factor nusG LH59_28005 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LH59_28015 PF03144 Elongation factor Tu domain 2 LH59_28015 PF00009 Elongation factor Tu GTP binding domain LH59_28015 PF03143 Elongation factor Tu C-terminal domain LH59_28035 PF00465 Iron-containing alcohol dehydrogenase LH59_28040 PF00171 Aldehyde dehydrogenase family LH59_28045 PF00120 Glutamine synthetase, catalytic domain LH59_28050 PF00459 Inositol monophosphatase family LH59_28060 PF08402 TOBE domain LH59_28060 PF00005 ABC transporter LH59_28070 PF00455 DeoR C terminal sensor domain LH59_28070 PF08220 DeoR-like helix-turn-helix domain LH59_28075 PF03401 Tripartite tricarboxylate transporter family receptor LH59_28085 PF01053 Cys/Met metabolism PLP-dependent enzyme LH59_28095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LH59_28095 PF03466 LysR substrate binding domain LH59_28100 PF00710 Asparaginase, N-terminal LH59_28100 PF17763 Glutaminase/Asparaginase C-terminal domain LH59_28105 PF02195 ParB-like nuclease domain LH59_28105 PF17762 HTH domain found in ParB protein LH59_28115 PF13614 AAA domain LH59_28120 PF02527 rRNA small subunit methyltransferase G LH59_28125 PF01134 Glucose inhibited division protein A LH59_28125 PF13932 GidA associated domain LH59_28130 PF00313 'Cold-shock' DNA-binding domain LH59_28135 PF05145 Transition state regulatory protein AbrB LH59_28140 PF00155 Aminotransferase class I and II LH59_28145 PF01970 Tripartite tricarboxylate transporter TctA family LH59_28160 PF00512 His Kinase A (phospho-acceptor) domain LH59_28160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LH59_28160 PF00672 HAMP domain LH59_28165 PF00486 Transcriptional regulatory protein, C terminal LH59_28165 PF00072 Response regulator receiver domain LH59_28170 PF00654 Voltage gated chloride channel LH59_28185 PF12631 MnmE helical domain LH59_28185 PF10396 GTP-binding protein TrmE N-terminus LH59_28185 PF01926 50S ribosome-binding GTPase LH59_28190 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LH59_28195 PF00528 Binding-protein-dependent transport system inner membrane component LH59_28200 PF12911 N-terminal TM domain of oligopeptide transport permease C LH59_28200 PF00528 Binding-protein-dependent transport system inner membrane component LH59_28205 PF00005 ABC transporter LH59_28205 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LH59_28210 PF00005 ABC transporter LH59_28210 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LH59_28215 PF01546 Peptidase family M20/M25/M40 LH59_28215 PF07687 Peptidase dimerisation domain LH59_28220 PF02668 Taurine catabolism dioxygenase TauD, TfdA family LH59_28230 PF00291 Pyridoxal-phosphate dependent enzyme LH59_28235 PF00199 Catalase LH59_28235 PF06628 Catalase-related immune-responsive LH59_28240 PF14849 YidC periplasmic domain LH59_28240 PF02096 60Kd inner membrane protein LH59_28250 PF00825 Ribonuclease P LH59_28255 PF00468 Ribosomal protein L34