LH59_00005 SM00382 ATPases associated with a variety of cellular activities LH59_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain LH59_00010 SM00480 DNA polymerase III beta subunit LH59_00015 SM00387 Histidine kinase-like ATPases LH59_00015 SM00433 TopoisomeraseII LH59_00060 SM00062 Bacterial periplasmic substrate-binding proteins LH59_00075 SM00382 ATPases associated with a variety of cellular activities LH59_00105 SM00346 helix_turn_helix isocitrate lyase regulation LH59_00110 SM00382 ATPases associated with a variety of cellular activities LH59_00150 SM00342 helix_turn_helix, arabinose operon control protein LH59_00150 SM00871 Bacterial transcription activator, effector binding domain LH59_00175 SM00345 helix_turn_helix gluconate operon transcriptional repressor LH59_00175 SM00866 LH59_00175 LH59_00185 SM00382 ATPases associated with a variety of cellular activities LH59_00240 SM00382 ATPases associated with a variety of cellular activities LH59_00250 SM00450 Rhodanese Homology Domain LH59_00270 SM00903 Flavin reductase like domain LH59_00295 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain LH59_00305 SM00344 helix_turn_helix ASNC type LH59_00315 SM00822 LH59_00315 LH59_00325 SM00382 ATPases associated with a variety of cellular activities LH59_00335 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain LH59_00335 SM00437 Bacterial DNA topoisomerase I DNA-binding domain LH59_00335 SM00493 LH59_00335 LH59_00365 SM01119 LH59_00365 LH59_00375 SM00382 ATPases associated with a variety of cellular activities LH59_00390 SM00062 Bacterial periplasmic substrate-binding proteins LH59_00415 SM00342 helix_turn_helix, arabinose operon control protein LH59_00470 SM00345 helix_turn_helix gluconate operon transcriptional repressor LH59_00470 SM00895 LH59_00470 LH59_00480 SM00965 Secretin and TonB N terminus short domain LH59_00510 SM00822 LH59_00510 LH59_00515 SM00881 CoA binding domain LH59_00535 SM00346 helix_turn_helix isocitrate lyase regulation LH59_00550 SM00342 helix_turn_helix, arabinose operon control protein LH59_00555 SM00878 Biotin carboxylase C-terminal domain LH59_00555 SM01209 LH59_00555 LH59_00595 SM00422 helix_turn_helix, mercury resistance LH59_00600 SM00849 Metallo-beta-lactamase superfamily LH59_00640 SM00836 DALR anticodon binding domain LH59_00640 SM01016 Arginyl tRNA synthetase N terminal dom LH59_00670 SM00382 ATPases associated with a variety of cellular activities LH59_00680 SM00354 helix_turn _helix lactose operon repressor LH59_00690 SM00917 LeuA allosteric (dimerisation) domain LH59_00765 SM00487 DEAD-like helicases superfamily LH59_00765 SM00490 helicase superfamily c-terminal domain LH59_00785 SM00382 ATPases associated with a variety of cellular activities LH59_00815 SM00342 helix_turn_helix, arabinose operon control protein LH59_00900 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. LH59_00905 SM00530 Helix-turn-helix XRE-family like proteins LH59_00990 SM00382 ATPases associated with a variety of cellular activities LH59_01015 SM00382 ATPases associated with a variety of cellular activities LH59_01060 SM00878 Biotin carboxylase C-terminal domain LH59_01065 SM00796 Allophanate hydrolase subunit 1 LH59_01070 SM00797 Allophanate hydrolase subunit 2 LH59_01115 SM00100 Cyclic nucleotide-monophosphate binding domain LH59_01205 SM00984 UDP binding domain LH59_01215 SM00344 helix_turn_helix ASNC type LH59_01225 SM00829 Enoylreductase LH59_01245 SM00342 helix_turn_helix, arabinose operon control protein LH59_01270 SM00382 ATPases associated with a variety of cellular activities LH59_01400 SM00448 cheY-homologous receiver domain LH59_01400 SM00862 Transcriptional regulatory protein, C terminal LH59_01405 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LH59_01405 SM00387 Histidine kinase-like ATPases LH59_01405 SM00388 His Kinase A (phosphoacceptor) domain LH59_01430 SM00829 Enoylreductase LH59_01440 SM00345 helix_turn_helix gluconate operon transcriptional repressor LH59_01440 SM00866 LH59_01440 LH59_01470 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LH59_01470 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LH59_01480 SM00972 Spore Coat Protein U domain LH59_01495 SM00972 Spore Coat Protein U domain LH59_01530 SM01236 LH59_01530 LH59_01550 SM00345 helix_turn_helix gluconate operon transcriptional repressor LH59_01550 SM00895 LH59_01550 LH59_01585 SM00382 ATPases associated with a variety of cellular activities LH59_01635 SM00062 Bacterial periplasmic substrate-binding proteins LH59_01655 SM00382 ATPases associated with a variety of cellular activities LH59_01670 SM00382 ATPases associated with a variety of cellular activities LH59_01715 SM00926 Molybdopterin oxidoreductase Fe4S4 domain LH59_01765 SM00460 Transglutaminase/protease-like homologues LH59_01810 SM00382 ATPases associated with a variety of cellular activities LH59_01850 SM00925 MltA specific insert domain LH59_01875 SM00905 Dihydroneopterin aldolase LH59_01910 SM00382 ATPases associated with a variety of cellular activities LH59_01915 SM00382 ATPases associated with a variety of cellular activities LH59_01940 SM01012 LH59_01940 LH59_01960 SM00882 Coenzyme A transferase LH59_01965 SM00882 Coenzyme A transferase LH59_01975 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. LH59_02025 SM00382 ATPases associated with a variety of cellular activities LH59_02045 SM00487 DEAD-like helicases superfamily LH59_02045 SM00490 helicase superfamily c-terminal domain LH59_02055 SM00342 helix_turn_helix, arabinose operon control protein LH59_02075 SM00342 helix_turn_helix, arabinose operon control protein LH59_02100 SM00382 ATPases associated with a variety of cellular activities LH59_02105 SM00382 ATPases associated with a variety of cellular activities LH59_02235 SM00849 Metallo-beta-lactamase superfamily LH59_02275 SM00382 ATPases associated with a variety of cellular activities LH59_02280 SM00382 ATPases associated with a variety of cellular activities LH59_02290 SM00345 helix_turn_helix gluconate operon transcriptional repressor LH59_02290 SM00895 LH59_02290 LH59_02335 SM00421 helix_turn_helix, Lux Regulon LH59_02370 SM00858 LH59_02370 LH59_02375 SM00345 helix_turn_helix gluconate operon transcriptional repressor LH59_02375 SM00866 LH59_02375 LH59_02405 SM00345 helix_turn_helix gluconate operon transcriptional repressor LH59_02405 SM00895 LH59_02405 LH59_02415 SM00797 Allophanate hydrolase subunit 2 LH59_02420 SM00796 Allophanate hydrolase subunit 1 LH59_02465 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LH59_02465 SM00387 Histidine kinase-like ATPases LH59_02465 SM00388 His Kinase A (phosphoacceptor) domain LH59_02470 SM00448 cheY-homologous receiver domain LH59_02470 SM00862 Transcriptional regulatory protein, C terminal LH59_02475 SM00387 Histidine kinase-like ATPases LH59_02475 SM00388 His Kinase A (phosphoacceptor) domain LH59_02480 SM00448 cheY-homologous receiver domain LH59_02480 SM00862 Transcriptional regulatory protein, C terminal LH59_02490 SM00978 LH59_02490 LH59_02545 SM01018 B12 binding domain LH59_02550 SM00345 helix_turn_helix gluconate operon transcriptional repressor LH59_02550 SM00895 LH59_02550 LH59_02565 SM00829 Enoylreductase LH59_02580 SM00382 ATPases associated with a variety of cellular activities LH59_02585 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain LH59_02600 SM00530 Helix-turn-helix XRE-family like proteins LH59_02620 SM00342 helix_turn_helix, arabinose operon control protein LH59_02635 SM00382 ATPases associated with a variety of cellular activities LH59_02640 SM00062 Bacterial periplasmic substrate-binding proteins LH59_02655 SM00382 ATPases associated with a variety of cellular activities LH59_02675 SM00382 ATPases associated with a variety of cellular activities LH59_02680 SM00382 ATPases associated with a variety of cellular activities LH59_02715 SM00830 Chorismate mutase type II LH59_02770 SM00421 helix_turn_helix, Lux Regulon LH59_02850 SM00382 ATPases associated with a variety of cellular activities LH59_02880 SM00347 helix_turn_helix multiple antibiotic resistance protein LH59_02900 SM00382 ATPases associated with a variety of cellular activities LH59_02905 SM00382 ATPases associated with a variety of cellular activities LH59_02910 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LH59_02910 SM00331 Sigma factor PP2C-like phosphatases LH59_02925 SM00267 diguanylate cyclase LH59_02930 SM00052 Putative diguanylate phosphodiesterase LH59_02930 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. LH59_02930 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) LH59_02930 SM00091 PAS domain LH59_02930 SM00267 diguanylate cyclase LH59_03040 SM00732 Likely ribonuclease with RNase H fold. LH59_03080 SM00062 Bacterial periplasmic substrate-binding proteins LH59_03095 SM00382 ATPases associated with a variety of cellular activities LH59_03125 SM00382 ATPases associated with a variety of cellular activities LH59_03140 SM00387 Histidine kinase-like ATPases LH59_03140 SM00388 His Kinase A (phosphoacceptor) domain LH59_03145 SM00448 cheY-homologous receiver domain LH59_03145 SM00862 Transcriptional regulatory protein, C terminal LH59_03150 SM00955 LH59_03150 LH59_03180 SM00878 Biotin carboxylase C-terminal domain LH59_03260 SM00344 helix_turn_helix ASNC type LH59_03310 SM00382 ATPases associated with a variety of cellular activities LH59_03355 SM00382 ATPases associated with a variety of cellular activities LH59_03360 SM00382 ATPases associated with a variety of cellular activities LH59_03375 SM00859 Semialdehyde dehydrogenase, NAD binding domain LH59_03400 SM00363 S4 RNA-binding domain LH59_03425 SM00342 helix_turn_helix, arabinose operon control protein LH59_03450 SM00763 PrkA AAA domain LH59_03515 SM00331 Sigma factor PP2C-like phosphatases LH59_03515 SM01049 LH59_03515 LH59_03525 SM01005 Alanine racemase, C-terminal domain LH59_03575 SM00257 Lysin motif LH59_03580 SM00849 Metallo-beta-lactamase superfamily LH59_03605 SM00479 LH59_03605 LH59_03675 SM00345 helix_turn_helix gluconate operon transcriptional repressor LH59_03675 SM00895 LH59_03675 LH59_03695 SM00382 ATPases associated with a variety of cellular activities LH59_03700 SM00382 ATPases associated with a variety of cellular activities LH59_03705 SM01130 LH59_03705 LH59_03740 SM00345 helix_turn_helix gluconate operon transcriptional repressor LH59_03755 SM00838 Elongation factor G C-terminus LH59_03755 SM00889 Elongation factor G, domain IV LH59_03765 SM00344 helix_turn_helix ASNC type LH59_03780 SM00382 ATPases associated with a variety of cellular activities LH59_03835 SM00448 cheY-homologous receiver domain LH59_03835 SM00862 Transcriptional regulatory protein, C terminal LH59_03840 SM00387 Histidine kinase-like ATPases LH59_03840 SM00388 His Kinase A (phosphoacceptor) domain LH59_03930 SM00344 helix_turn_helix ASNC type LH59_03985 SM00151 SWI complex, BAF60b domains LH59_04000 SM00382 ATPases associated with a variety of cellular activities LH59_04055 SM01209 LH59_04055 LH59_04065 SM00842 Cell division protein FtsA LH59_04070 SM00864 Tubulin/FtsZ family, GTPase domain LH59_04070 SM00865 Tubulin/FtsZ family, C-terminal domain LH59_04090 SM00957 SecA DEAD-like domain LH59_04090 SM00958 SecA preprotein cross-linking domain LH59_04100 SM00345 helix_turn_helix gluconate operon transcriptional repressor LH59_04100 SM00895 LH59_04100 LH59_04125 SM00344 helix_turn_helix ASNC type LH59_04140 SM00116 Domain in cystathionine beta-synthase and other proteins. LH59_04140 SM00924 MgtE intracellular N domain LH59_04185 SM00382 ATPases associated with a variety of cellular activities LH59_04185 SM00930 LH59_04185 LH59_04215 SM00965 Secretin and TonB N terminus short domain LH59_04230 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LH59_04230 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LH59_04250 SM00342 helix_turn_helix, arabinose operon control protein LH59_04285 SM00267 diguanylate cyclase LH59_04295 SM00822 LH59_04295 LH59_04340 SM00347 helix_turn_helix multiple antibiotic resistance protein LH59_04380 SM00650 Ribosomal RNA adenine dimethylases LH59_04425 SM00563 Phosphate acyltransferases LH59_04455 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) LH59_04455 SM00091 PAS domain LH59_04455 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LH59_04475 SM00822 LH59_04475 LH59_04590 SM00853 MutL C terminal dimerisation domain LH59_04590 SM01340 LH59_04590 LH59_04605 SM00646 LH59_04605 LH59_04705 SM00903 Flavin reductase like domain LH59_04730 SM00382 ATPases associated with a variety of cellular activities LH59_04780 SM00382 ATPases associated with a variety of cellular activities LH59_04785 SM00346 helix_turn_helix isocitrate lyase regulation LH59_04815 SM00382 ATPases associated with a variety of cellular activities LH59_04820 SM00382 ATPases associated with a variety of cellular activities LH59_04835 SM00822 LH59_04835 LH59_04885 SM00347 helix_turn_helix multiple antibiotic resistance protein LH59_04905 SM00382 ATPases associated with a variety of cellular activities LH59_04910 SM00382 ATPases associated with a variety of cellular activities LH59_04920 SM00342 helix_turn_helix, arabinose operon control protein LH59_04935 SM00382 ATPases associated with a variety of cellular activities LH59_04985 SM00341 Helicase and RNase D C-terminal LH59_04985 SM00487 DEAD-like helicases superfamily LH59_04985 SM00490 helicase superfamily c-terminal domain LH59_04985 SM00956 LH59_04985 LH59_04995 SM00448 cheY-homologous receiver domain LH59_04995 SM00862 Transcriptional regulatory protein, C terminal LH59_05000 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LH59_05000 SM00387 Histidine kinase-like ATPases LH59_05005 SM00382 ATPases associated with a variety of cellular activities LH59_05020 SM00278 Helix-hairpin-helix DNA-binding motif class 1 LH59_05030 SM00798 AICARFT/IMPCHase bienzyme LH59_05030 SM00851 MGS-like domain LH59_05055 SM01011 Aminopeptidase P, N-terminal domain LH59_05070 SM00831 Cation transporter/ATPase, N-terminus LH59_05145 SM00487 DEAD-like helicases superfamily LH59_05145 SM00490 helicase superfamily c-terminal domain LH59_05160 SM00852 Probable molybdopterin binding domain LH59_05165 SM00346 helix_turn_helix isocitrate lyase regulation LH59_05320 SM00271 DnaJ molecular chaperone homology domain LH59_05355 SM00382 ATPases associated with a variety of cellular activities LH59_05375 SM01329 LH59_05375 LH59_05390 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LH59_05390 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LH59_05390 SM01049 LH59_05390 LH59_05395 SM01130 LH59_05395 LH59_05410 SM00448 cheY-homologous receiver domain LH59_05410 SM00862 Transcriptional regulatory protein, C terminal LH59_05415 SM00387 Histidine kinase-like ATPases LH59_05415 SM00388 His Kinase A (phosphoacceptor) domain LH59_05460 SM00463 Small MutS-related domain LH59_05470 SM00382 ATPases associated with a variety of cellular activities LH59_05470 SM00843 LH59_05470 LH59_05495 SM00382 ATPases associated with a variety of cellular activities LH59_05500 SM00382 ATPases associated with a variety of cellular activities LH59_05520 SM01119 LH59_05520 LH59_05530 SM00382 ATPases associated with a variety of cellular activities LH59_05560 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain LH59_05565 SM01130 LH59_05565 LH59_05585 SM00382 ATPases associated with a variety of cellular activities LH59_05600 SM00382 ATPases associated with a variety of cellular activities LH59_05605 SM00382 ATPases associated with a variety of cellular activities LH59_05665 SM01387 LH59_05665 LH59_05670 SM00316 Ribosomal protein S1-like RNA-binding domain LH59_05670 SM00322 K homology RNA-binding domain LH59_05700 SM00342 helix_turn_helix, arabinose operon control protein LH59_05720 SM00829 Enoylreductase LH59_05770 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LH59_05810 SM00100 Cyclic nucleotide-monophosphate binding domain LH59_05810 SM00419 helix_turn_helix, cAMP Regulatory protein LH59_05825 SM00382 ATPases associated with a variety of cellular activities LH59_05850 SM00965 Secretin and TonB N terminus short domain LH59_05865 SM00387 Histidine kinase-like ATPases LH59_05865 SM00388 His Kinase A (phosphoacceptor) domain LH59_05870 SM00448 cheY-homologous receiver domain LH59_05870 SM00862 Transcriptional regulatory protein, C terminal LH59_05880 SM00822 LH59_05880 LH59_05885 SM00822 LH59_05885 LH59_05895 SM00448 cheY-homologous receiver domain LH59_05905 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) LH59_05905 SM00091 PAS domain LH59_05905 SM00387 Histidine kinase-like ATPases LH59_05905 SM00388 His Kinase A (phosphoacceptor) domain LH59_05905 SM00448 cheY-homologous receiver domain LH59_05910 SM00387 Histidine kinase-like ATPases LH59_05910 SM00388 His Kinase A (phosphoacceptor) domain LH59_05920 SM00382 ATPases associated with a variety of cellular activities LH59_05945 SM00344 helix_turn_helix ASNC type LH59_05965 SM00382 ATPases associated with a variety of cellular activities LH59_05970 SM00345 helix_turn_helix gluconate operon transcriptional repressor LH59_05970 SM00895 LH59_05970 LH59_06080 SM00014 Acid phosphatase homologues LH59_06130 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LH59_06135 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LH59_06190 SM00487 DEAD-like helicases superfamily LH59_06190 SM00490 helicase superfamily c-terminal domain LH59_06190 SM00982 LH59_06190 LH59_06190 SM01058 CarD-like/TRCF domain LH59_06205 SM00450 Rhodanese Homology Domain LH59_06220 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LH59_06220 SM00387 Histidine kinase-like ATPases LH59_06220 SM00388 His Kinase A (phosphoacceptor) domain LH59_06225 SM00448 cheY-homologous receiver domain LH59_06225 SM00862 Transcriptional regulatory protein, C terminal LH59_06235 SM00986 Uracil DNA glycosylase superfamily LH59_06235 SM00987 UreE urease accessory protein, C-terminal domain LH59_06245 SM00968 SMC proteins Flexible Hinge Domain LH59_06250 SM00771 ZipA, C-terminal domain (FtsZ-binding) LH59_06255 SM00278 Helix-hairpin-helix DNA-binding motif class 1 LH59_06255 SM00292 breast cancer carboxy-terminal domain LH59_06255 SM00532 Ligase N family LH59_06280 SM00382 ATPases associated with a variety of cellular activities LH59_06310 SM00382 ATPases associated with a variety of cellular activities LH59_06315 SM01022 LH59_06315 LH59_06350 SM00382 ATPases associated with a variety of cellular activities LH59_06355 SM00382 ATPases associated with a variety of cellular activities LH59_06360 SM00478 endonuclease III LH59_06360 SM00525 LH59_06360 LH59_06405 SM00954 Region found in RelA / SpoT proteins LH59_06440 SM00316 Ribosomal protein S1-like RNA-binding domain LH59_06445 SM00363 S4 RNA-binding domain LH59_06465 SM00644 LH59_06465 LH59_06500 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. LH59_06505 SM00822 LH59_06505 LH59_06515 SM00825 Beta-ketoacyl synthase LH59_06540 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. LH59_06545 SM00838 Elongation factor G C-terminus LH59_06555 SM00358 Double-stranded RNA binding motif LH59_06555 SM00535 Ribonuclease III family LH59_06695 SM00345 helix_turn_helix gluconate operon transcriptional repressor LH59_06695 SM00895 LH59_06695 LH59_06725 SM00882 Coenzyme A transferase LH59_06730 SM00882 Coenzyme A transferase LH59_06750 SM00382 ATPases associated with a variety of cellular activities LH59_06800 SM01192 LH59_06800 LH59_06800 SM01193 LH59_06800 LH59_06855 SM00981 LH59_06855 LH59_06885 SM00345 helix_turn_helix gluconate operon transcriptional repressor LH59_06885 SM00866 LH59_06885 LH59_06930 SM00919 Malic enzyme, NAD binding domain LH59_06930 SM01274 LH59_06930 LH59_06935 SM00861 Transketolase, pyrimidine binding domain LH59_06965 SM00344 helix_turn_helix ASNC type LH59_06970 SM00861 Transketolase, pyrimidine binding domain LH59_07035 SM00316 Ribosomal protein S1-like RNA-binding domain LH59_07035 SM00732 Likely ribonuclease with RNase H fold. LH59_07040 SM00491 LH59_07040 LH59_07050 SM00363 S4 RNA-binding domain LH59_07065 SM00822 LH59_07065 LH59_07110 SM00749 bacterial OsmY and nodulation domain LH59_07130 SM01209 LH59_07130 LH59_07140 SM00382 ATPases associated with a variety of cellular activities LH59_07215 SM00028 Tetratricopeptide repeats LH59_07260 SM00434 DNA Topoisomerase IV LH59_07270 SM00830 Chorismate mutase type II LH59_07295 SM00316 Ribosomal protein S1-like RNA-binding domain LH59_07300 SM00411 bacterial (prokaryotic) histone like domain LH59_07340 SM00346 helix_turn_helix isocitrate lyase regulation LH59_07360 SM00893 Electron transfer flavoprotein domain LH59_07365 SM00893 Electron transfer flavoprotein domain LH59_07410 SM00382 ATPases associated with a variety of cellular activities LH59_07430 SM00729 Elongator protein 3, MiaB family, Radical SAM LH59_07465 SM00479 LH59_07465 LH59_07570 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. LH59_07575 SM00387 Histidine kinase-like ATPases LH59_07575 SM00388 His Kinase A (phosphoacceptor) domain LH59_07580 SM00448 cheY-homologous receiver domain LH59_07580 SM00862 Transcriptional regulatory protein, C terminal LH59_07595 SM00833 Cobalamin synthesis protein cobW C-terminal domain LH59_07600 SM00833 Cobalamin synthesis protein cobW C-terminal domain LH59_07620 SM00363 S4 RNA-binding domain LH59_07630 SM00316 Ribosomal protein S1-like RNA-binding domain LH59_07685 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs LH59_07685 SM00474 3'-5' exonuclease LH59_07685 SM00475 5'-3' exonuclease LH59_07685 SM00479 LH59_07685 LH59_07685 SM00482 DNA polymerase A domain LH59_07725 SM00450 Rhodanese Homology Domain LH59_07740 SM00382 ATPases associated with a variety of cellular activities LH59_07780 SM00346 helix_turn_helix isocitrate lyase regulation LH59_07795 SM00861 Transketolase, pyrimidine binding domain LH59_07835 SM00382 ATPases associated with a variety of cellular activities LH59_07855 SM00344 helix_turn_helix ASNC type LH59_07880 SM00345 helix_turn_helix gluconate operon transcriptional repressor LH59_07935 SM00267 diguanylate cyclase LH59_07955 SM00387 Histidine kinase-like ATPases LH59_07955 SM00388 His Kinase A (phosphoacceptor) domain LH59_07960 SM00448 cheY-homologous receiver domain LH59_07960 SM00862 Transcriptional regulatory protein, C terminal LH59_07965 SM00382 ATPases associated with a variety of cellular activities LH59_08000 SM00881 CoA binding domain LH59_08045 SM00346 helix_turn_helix isocitrate lyase regulation LH59_08065 SM00822 LH59_08065 LH59_08070 SM00382 ATPases associated with a variety of cellular activities LH59_08075 SM00382 ATPases associated with a variety of cellular activities LH59_08085 SM00886 Stress responsive A/B Barrel Domain LH59_08100 SM00670 Large family of predicted nucleotide-binding domains LH59_08150 SM00528 Domain in histone-like proteins of HNS family LH59_08195 SM01002 Alanine dehydrogenase/PNT, C-terminal domain LH59_08195 SM01003 Alanine dehydrogenase/PNT, N-terminal domain LH59_08385 SM00267 diguanylate cyclase LH59_08440 SM00155 Phospholipase D. Active site motifs. LH59_08475 SM01144 LH59_08475 LH59_08485 SM00316 Ribosomal protein S1-like RNA-binding domain LH59_08485 SM00357 Cold shock protein domain LH59_08485 SM00955 LH59_08485 LH59_08490 SM00967 RNA 2'-O ribose methyltransferase substrate binding LH59_08500 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. LH59_08505 SM00411 bacterial (prokaryotic) histone like domain LH59_08530 SM00448 cheY-homologous receiver domain LH59_08530 SM00862 Transcriptional regulatory protein, C terminal LH59_08535 SM00387 Histidine kinase-like ATPases LH59_08535 SM00388 His Kinase A (phosphoacceptor) domain LH59_08635 SM00382 ATPases associated with a variety of cellular activities LH59_08705 SM00382 ATPases associated with a variety of cellular activities LH59_08705 SM00487 DEAD-like helicases superfamily LH59_08705 SM00490 helicase superfamily c-terminal domain LH59_08705 SM00847 Helicase associated domain (HA2) Add an annotation LH59_08715 SM00382 ATPases associated with a variety of cellular activities LH59_08725 SM00481 DNA polymerase alpha chain like domain LH59_08775 SM00382 ATPases associated with a variety of cellular activities LH59_08790 SM00267 diguanylate cyclase LH59_08800 SM00316 Ribosomal protein S1-like RNA-binding domain LH59_08830 SM00382 ATPases associated with a variety of cellular activities LH59_08830 SM00448 cheY-homologous receiver domain LH59_08835 SM00387 Histidine kinase-like ATPases LH59_08835 SM00388 His Kinase A (phosphoacceptor) domain LH59_08870 SM01209 LH59_08870 LH59_08870 SM01210 LH59_08870 LH59_08885 SM01329 LH59_08885 LH59_08910 SM00347 helix_turn_helix multiple antibiotic resistance protein LH59_08925 SM00829 Enoylreductase LH59_08985 SM00357 Cold shock protein domain LH59_08985 SM00382 ATPases associated with a variety of cellular activities LH59_08985 SM00959 Rho termination factor, N-terminal domain LH59_08995 SM00387 Histidine kinase-like ATPases LH59_08995 SM00433 TopoisomeraseII LH59_09005 SM00434 DNA Topoisomerase IV LH59_09030 SM00347 helix_turn_helix multiple antibiotic resistance protein LH59_09090 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain LH59_09120 SM00530 Helix-turn-helix XRE-family like proteins LH59_09125 SM00062 Bacterial periplasmic substrate-binding proteins LH59_09125 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. LH59_09135 SM00382 ATPases associated with a variety of cellular activities LH59_09150 SM00562 LH59_09150 LH59_09180 SM00564 beta-propeller repeat LH59_09185 SM00382 ATPases associated with a variety of cellular activities LH59_09205 SM00244 prohibitin homologues LH59_09210 SM00244 prohibitin homologues LH59_09235 SM00400 zinc finger LH59_09235 SM00493 LH59_09235 LH59_09235 SM00766 DNA primase DnaG DnaB-binding LH59_09285 SM00858 LH59_09285 LH59_09295 SM00240 Forkhead associated domain LH59_09325 SM00116 Domain in cystathionine beta-synthase and other proteins. LH59_09345 SM00448 cheY-homologous receiver domain LH59_09345 SM00862 Transcriptional regulatory protein, C terminal LH59_09350 SM00387 Histidine kinase-like ATPases LH59_09350 SM00388 His Kinase A (phosphoacceptor) domain LH59_09355 SM00052 Putative diguanylate phosphodiesterase LH59_09355 SM00267 diguanylate cyclase LH59_09360 SM00052 Putative diguanylate phosphodiesterase LH59_09360 SM00267 diguanylate cyclase LH59_09375 SM00052 Putative diguanylate phosphodiesterase LH59_09375 SM00267 diguanylate cyclase LH59_09385 SM00327 von Willebrand factor (vWF) type A domain LH59_09395 SM00421 helix_turn_helix, Lux Regulon LH59_09405 SM00382 ATPases associated with a variety of cellular activities LH59_09430 SM01329 LH59_09430 LH59_09435 SM00859 Semialdehyde dehydrogenase, NAD binding domain LH59_09440 SM00257 Lysin motif LH59_09525 SM00354 helix_turn _helix lactose operon repressor LH59_09545 SM00382 ATPases associated with a variety of cellular activities LH59_09580 SM00345 helix_turn_helix gluconate operon transcriptional repressor LH59_09580 SM00895 LH59_09580 LH59_09595 SM00729 Elongator protein 3, MiaB family, Radical SAM LH59_09600 SM00421 helix_turn_helix, Lux Regulon LH59_09600 SM00448 cheY-homologous receiver domain LH59_09610 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain LH59_09645 SM00938 Nitrogen regulatory protein P-II LH59_09685 SM00873 B3/4 domain LH59_09685 SM00874 tRNA synthetase B5 domain LH59_09685 SM00896 Ferredoxin-fold anticodon binding domain LH59_09690 SM00411 bacterial (prokaryotic) histone like domain LH59_09695 SM00422 helix_turn_helix, mercury resistance LH59_09780 SM00344 helix_turn_helix ASNC type LH59_09830 SM00062 Bacterial periplasmic substrate-binding proteins LH59_09840 SM00382 ATPases associated with a variety of cellular activities LH59_09870 SM00382 ATPases associated with a variety of cellular activities LH59_09900 SM00342 helix_turn_helix, arabinose operon control protein LH59_09935 SM00267 diguanylate cyclase LH59_09965 SM00825 Beta-ketoacyl synthase LH59_09970 SM00822 LH59_09970 LH59_09980 SM00825 Beta-ketoacyl synthase LH59_10070 SM00342 helix_turn_helix, arabinose operon control protein LH59_10115 SM00382 ATPases associated with a variety of cellular activities LH59_10140 SM00100 Cyclic nucleotide-monophosphate binding domain LH59_10150 SM00347 helix_turn_helix multiple antibiotic resistance protein LH59_10200 SM00345 helix_turn_helix gluconate operon transcriptional repressor LH59_10240 SM00822 LH59_10240 LH59_10275 SM00903 Flavin reductase like domain LH59_10300 SM00342 helix_turn_helix, arabinose operon control protein LH59_10355 SM00965 Secretin and TonB N terminus short domain LH59_10435 SM00382 ATPases associated with a variety of cellular activities LH59_10470 SM00926 Molybdopterin oxidoreductase Fe4S4 domain LH59_10475 SM00028 Tetratricopeptide repeats LH59_10515 SM00382 ATPases associated with a variety of cellular activities LH59_10530 SM00926 Molybdopterin oxidoreductase Fe4S4 domain LH59_10560 SM00345 helix_turn_helix gluconate operon transcriptional repressor LH59_10560 SM00895 LH59_10560 LH59_10575 SM00052 Putative diguanylate phosphodiesterase LH59_10575 SM00091 PAS domain LH59_10575 SM00267 diguanylate cyclase LH59_10625 SM00822 LH59_10625 LH59_10645 SM00342 helix_turn_helix, arabinose operon control protein LH59_10675 SM01007 Class II Aldolase and Adducin N-terminal domain LH59_10695 SM00345 helix_turn_helix gluconate operon transcriptional repressor LH59_10695 SM00866 LH59_10695 LH59_10735 SM00344 helix_turn_helix ASNC type LH59_10745 SM00382 ATPases associated with a variety of cellular activities LH59_10760 SM00346 helix_turn_helix isocitrate lyase regulation LH59_10775 SM00822 LH59_10775 LH59_10805 SM00382 ATPases associated with a variety of cellular activities LH59_10860 SM00354 helix_turn _helix lactose operon repressor LH59_10915 SM00345 helix_turn_helix gluconate operon transcriptional repressor LH59_10915 SM00895 LH59_10915 LH59_10955 SM00422 helix_turn_helix, mercury resistance LH59_10980 SM00965 Secretin and TonB N terminus short domain LH59_10995 SM00861 Transketolase, pyrimidine binding domain LH59_11030 SM00938 Nitrogen regulatory protein P-II LH59_11045 SM00382 ATPases associated with a variety of cellular activities LH59_11155 SM00382 ATPases associated with a variety of cellular activities LH59_11160 SM01322 LH59_11160 LH59_11185 SM00363 S4 RNA-binding domain LH59_11235 SM00421 helix_turn_helix, Lux Regulon LH59_11235 SM00448 cheY-homologous receiver domain LH59_11240 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) LH59_11240 SM00091 PAS domain LH59_11240 SM00387 Histidine kinase-like ATPases LH59_11240 SM00388 His Kinase A (phosphoacceptor) domain LH59_11315 SM00448 cheY-homologous receiver domain LH59_11320 SM00073 Histidine Phosphotransfer domain LH59_11320 SM00260 Two component signalling adaptor domain LH59_11320 SM00387 Histidine kinase-like ATPases LH59_11320 SM01231 LH59_11320 LH59_11325 SM00260 Two component signalling adaptor domain LH59_11330 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LH59_11330 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LH59_11335 SM00138 Methyltransferase, chemotaxis proteins LH59_11340 SM00448 cheY-homologous receiver domain LH59_11345 SM00448 cheY-homologous receiver domain LH59_11355 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LH59_11375 SM00382 ATPases associated with a variety of cellular activities LH59_11375 SM00962 SRP54-type protein, GTPase domain LH59_11390 SM00858 LH59_11390 LH59_11435 SM00047 Lysozyme subfamily 2 LH59_11450 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LH59_11450 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LH59_11460 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LH59_11460 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LH59_11465 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) LH59_11465 SM00091 PAS domain LH59_11465 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LH59_11465 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LH59_11515 SM00382 ATPases associated with a variety of cellular activities LH59_11635 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. LH59_11680 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. LH59_11690 SM00935 Outer membrane protein (OmpH-like) LH59_11755 SM00244 prohibitin homologues LH59_11760 SM00267 diguanylate cyclase LH59_11830 SM00248 ankyrin repeats LH59_11835 SM00346 helix_turn_helix isocitrate lyase regulation LH59_11840 SM00062 Bacterial periplasmic substrate-binding proteins LH59_11840 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. LH59_11850 SM00382 ATPases associated with a variety of cellular activities LH59_11865 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LH59_11900 SM00344 helix_turn_helix ASNC type LH59_11980 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor LH59_12035 SM00382 ATPases associated with a variety of cellular activities LH59_12060 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. LH59_12070 SM00420 helix_turn_helix, Deoxyribose operon repressor LH59_12070 SM01134 LH59_12070 LH59_12075 SM00382 ATPases associated with a variety of cellular activities LH59_12080 SM00382 ATPases associated with a variety of cellular activities LH59_12110 SM00862 Transcriptional regulatory protein, C terminal LH59_12135 SM00342 helix_turn_helix, arabinose operon control protein LH59_12205 SM00344 helix_turn_helix ASNC type LH59_12290 SM00382 ATPases associated with a variety of cellular activities LH59_12300 SM00382 ATPases associated with a variety of cellular activities LH59_12315 SM00062 Bacterial periplasmic substrate-binding proteins LH59_12350 SM01207 LH59_12350 LH59_12365 SM00257 Lysin motif LH59_12400 SM00422 helix_turn_helix, mercury resistance LH59_12450 SM00382 ATPases associated with a variety of cellular activities LH59_12465 SM00382 ATPases associated with a variety of cellular activities LH59_12545 SM00382 ATPases associated with a variety of cellular activities LH59_12550 SM00382 ATPases associated with a variety of cellular activities LH59_12605 SM00062 Bacterial periplasmic substrate-binding proteins LH59_12605 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. LH59_12615 SM00382 ATPases associated with a variety of cellular activities LH59_12625 SM00342 helix_turn_helix, arabinose operon control protein LH59_12630 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. LH59_12630 SM00954 Region found in RelA / SpoT proteins LH59_12635 SM01409 LH59_12635 LH59_12645 SM00072 Guanylate kinase homologues. LH59_12660 SM00822 LH59_12660 LH59_12720 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LH59_12720 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LH59_12725 SM00052 Putative diguanylate phosphodiesterase LH59_12725 SM00267 diguanylate cyclase LH59_12735 SM00729 Elongator protein 3, MiaB family, Radical SAM LH59_12740 SM01230 LH59_12740 LH59_12745 SM00091 PAS domain LH59_12745 SM00387 Histidine kinase-like ATPases LH59_12745 SM00388 His Kinase A (phosphoacceptor) domain LH59_12750 SM00382 ATPases associated with a variety of cellular activities LH59_12750 SM00448 cheY-homologous receiver domain LH59_12775 SM00382 ATPases associated with a variety of cellular activities LH59_12815 SM00487 DEAD-like helicases superfamily LH59_12815 SM00490 helicase superfamily c-terminal domain LH59_12830 SM00984 UDP binding domain LH59_12870 SM00656 LH59_12870 LH59_12885 SM00448 cheY-homologous receiver domain LH59_12885 SM00862 Transcriptional regulatory protein, C terminal LH59_12890 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LH59_12890 SM00387 Histidine kinase-like ATPases LH59_12890 SM00388 His Kinase A (phosphoacceptor) domain LH59_12905 SM00382 ATPases associated with a variety of cellular activities LH59_12950 SM00382 ATPases associated with a variety of cellular activities LH59_12955 SM00382 ATPases associated with a variety of cellular activities LH59_13010 SM00829 Enoylreductase LH59_13035 SM00091 PAS domain LH59_13035 SM00267 diguanylate cyclase LH59_13045 SM00344 helix_turn_helix ASNC type LH59_13065 SM00382 ATPases associated with a variety of cellular activities LH59_13075 SM00448 cheY-homologous receiver domain LH59_13075 SM00862 Transcriptional regulatory protein, C terminal LH59_13100 SM00052 Putative diguanylate phosphodiesterase LH59_13100 SM00448 cheY-homologous receiver domain LH59_13130 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. LH59_13130 SM00091 PAS domain LH59_13130 SM00387 Histidine kinase-like ATPases LH59_13130 SM00388 His Kinase A (phosphoacceptor) domain LH59_13130 SM00448 cheY-homologous receiver domain LH59_13145 SM00382 ATPases associated with a variety of cellular activities LH59_13150 SM00382 ATPases associated with a variety of cellular activities LH59_13150 SM00448 cheY-homologous receiver domain LH59_13230 SM00052 Putative diguanylate phosphodiesterase LH59_13285 SM01091 Transporter associated domain LH59_13295 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LH59_13295 SM00387 Histidine kinase-like ATPases LH59_13295 SM00388 His Kinase A (phosphoacceptor) domain LH59_13365 SM00382 ATPases associated with a variety of cellular activities LH59_13385 SM00912 haemagglutination activity domain LH59_13390 SM00965 Secretin and TonB N terminus short domain LH59_13470 SM00267 diguanylate cyclase LH59_13475 SM00422 helix_turn_helix, mercury resistance LH59_13485 SM00267 diguanylate cyclase LH59_13515 SM00382 ATPases associated with a variety of cellular activities LH59_13525 SM00062 Bacterial periplasmic substrate-binding proteins LH59_13555 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. LH59_13555 SM00245 tail specific protease LH59_13580 SM00363 S4 RNA-binding domain LH59_13605 SM00530 Helix-turn-helix XRE-family like proteins LH59_13615 SM00382 ATPases associated with a variety of cellular activities LH59_13620 SM00382 ATPases associated with a variety of cellular activities LH59_13660 SM00345 helix_turn_helix gluconate operon transcriptional repressor LH59_13660 SM00895 LH59_13660 LH59_13805 SM00226 Low molecular weight phosphatase family LH59_13810 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor LH59_13815 SM00867 YceI-like domain LH59_13830 SM00965 Secretin and TonB N terminus short domain LH59_13845 SM00382 ATPases associated with a variety of cellular activities LH59_13950 SM00382 ATPases associated with a variety of cellular activities LH59_13985 SM00945 ProQ/FINO family LH59_14000 SM00858 LH59_14000 LH59_14005 SM01130 LH59_14005 LH59_14015 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LH59_14015 SM00387 Histidine kinase-like ATPases LH59_14015 SM00388 His Kinase A (phosphoacceptor) domain LH59_14020 SM00448 cheY-homologous receiver domain LH59_14020 SM00862 Transcriptional regulatory protein, C terminal LH59_14040 SM00382 ATPases associated with a variety of cellular activities LH59_14070 SM00382 ATPases associated with a variety of cellular activities LH59_14080 SM01006 Siderophore biosynthesis protein domain LH59_14100 SM00342 helix_turn_helix, arabinose operon control protein LH59_14130 SM00382 ATPases associated with a variety of cellular activities LH59_14135 SM00382 ATPases associated with a variety of cellular activities LH59_14145 SM00062 Bacterial periplasmic substrate-binding proteins LH59_14145 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. LH59_14190 SM00859 Semialdehyde dehydrogenase, NAD binding domain LH59_14200 SM00116 Domain in cystathionine beta-synthase and other proteins. LH59_14205 SM00347 helix_turn_helix multiple antibiotic resistance protein LH59_14210 SM00116 Domain in cystathionine beta-synthase and other proteins. LH59_14215 SM00387 Histidine kinase-like ATPases LH59_14215 SM00388 His Kinase A (phosphoacceptor) domain LH59_14220 SM00421 helix_turn_helix, Lux Regulon LH59_14220 SM00448 cheY-homologous receiver domain LH59_14245 SM00450 Rhodanese Homology Domain LH59_14270 SM00382 ATPases associated with a variety of cellular activities LH59_14290 SM00062 Bacterial periplasmic substrate-binding proteins LH59_14295 SM00062 Bacterial periplasmic substrate-binding proteins LH59_14375 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain LH59_14385 SM00345 helix_turn_helix gluconate operon transcriptional repressor LH59_14385 SM00895 LH59_14385 LH59_14390 SM01130 LH59_14390 LH59_14415 SM00345 helix_turn_helix gluconate operon transcriptional repressor LH59_14415 SM00895 LH59_14415 LH59_14440 SM00382 ATPases associated with a variety of cellular activities LH59_14455 SM00342 helix_turn_helix, arabinose operon control protein LH59_14475 SM00062 Bacterial periplasmic substrate-binding proteins LH59_14500 SM00421 helix_turn_helix, Lux Regulon LH59_14500 SM00448 cheY-homologous receiver domain LH59_14505 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. LH59_14505 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LH59_14505 SM00387 Histidine kinase-like ATPases LH59_14515 SM00947 Carbonic anhydrase LH59_14520 SM00729 Elongator protein 3, MiaB family, Radical SAM LH59_14545 SM00926 Molybdopterin oxidoreductase Fe4S4 domain LH59_14635 SM00345 helix_turn_helix gluconate operon transcriptional repressor LH59_14675 SM00387 Histidine kinase-like ATPases LH59_14675 SM00388 His Kinase A (phosphoacceptor) domain LH59_14680 SM00448 cheY-homologous receiver domain LH59_14680 SM00862 Transcriptional regulatory protein, C terminal LH59_14710 SM00869 Autotransporter beta-domain LH59_14750 SM00345 helix_turn_helix gluconate operon transcriptional repressor LH59_14770 SM00387 Histidine kinase-like ATPases LH59_14770 SM01049 LH59_14770 LH59_14775 SM00421 helix_turn_helix, Lux Regulon LH59_14775 SM00448 cheY-homologous receiver domain LH59_14795 SM00062 Bacterial periplasmic substrate-binding proteins LH59_14800 SM00382 ATPases associated with a variety of cellular activities LH59_14815 SM00965 Secretin and TonB N terminus short domain LH59_14830 SM00345 helix_turn_helix gluconate operon transcriptional repressor LH59_14840 SM00869 Autotransporter beta-domain LH59_14850 SM01007 Class II Aldolase and Adducin N-terminal domain LH59_14865 SM00833 Cobalamin synthesis protein cobW C-terminal domain LH59_14875 SM00382 ATPases associated with a variety of cellular activities LH59_14905 SM00346 helix_turn_helix isocitrate lyase regulation LH59_14910 SM00487 DEAD-like helicases superfamily LH59_14910 SM00490 helicase superfamily c-terminal domain LH59_14925 SM00347 helix_turn_helix multiple antibiotic resistance protein LH59_14970 SM00346 helix_turn_helix isocitrate lyase regulation LH59_15000 SM00481 DNA polymerase alpha chain like domain LH59_15010 SM00422 helix_turn_helix, mercury resistance LH59_15060 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LH59_15060 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LH59_15075 SM00464 Found in ATP-dependent protease La (LON) LH59_15100 SM00382 ATPases associated with a variety of cellular activities LH59_15140 SM00342 helix_turn_helix, arabinose operon control protein LH59_15160 SM00346 helix_turn_helix isocitrate lyase regulation LH59_15220 SM00342 helix_turn_helix, arabinose operon control protein LH59_15250 SM00530 Helix-turn-helix XRE-family like proteins LH59_15275 SM00342 helix_turn_helix, arabinose operon control protein LH59_15330 SM00347 helix_turn_helix multiple antibiotic resistance protein LH59_15360 SM00860 SMI1 / KNR4 family LH59_15430 SM00382 ATPases associated with a variety of cellular activities LH59_15430 SM01086 C-terminal, D2-small domain, of ClpB protein LH59_15605 SM01192 LH59_15605 LH59_15605 SM01193 LH59_15605 LH59_15670 SM00345 helix_turn_helix gluconate operon transcriptional repressor LH59_15670 SM00895 LH59_15670 LH59_15690 SM00347 helix_turn_helix multiple antibiotic resistance protein LH59_15735 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LH59_15745 SM00344 helix_turn_helix ASNC type LH59_15755 SM00382 ATPases associated with a variety of cellular activities LH59_15770 SM00267 diguanylate cyclase LH59_15770 SM00448 cheY-homologous receiver domain LH59_15775 SM00448 cheY-homologous receiver domain LH59_15780 SM00073 Histidine Phosphotransfer domain LH59_15780 SM00260 Two component signalling adaptor domain LH59_15780 SM00387 Histidine kinase-like ATPases LH59_15780 SM00448 cheY-homologous receiver domain LH59_15785 SM00260 Two component signalling adaptor domain LH59_15790 SM00028 Tetratricopeptide repeats LH59_15790 SM00138 Methyltransferase, chemotaxis proteins LH59_15795 SM00260 Two component signalling adaptor domain LH59_15800 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LH59_15800 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LH59_15835 SM00491 LH59_15835 LH59_15840 SM00990 LH59_15840 LH59_15865 SM00822 LH59_15865 LH59_15905 SM00342 helix_turn_helix, arabinose operon control protein LH59_15910 SM00342 helix_turn_helix, arabinose operon control protein LH59_15945 SM00422 helix_turn_helix, mercury resistance LH59_15975 SM00822 LH59_15975 LH59_15980 SM00342 helix_turn_helix, arabinose operon control protein LH59_16015 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor LH59_16020 SM00829 Enoylreductase LH59_16110 SM00116 Domain in cystathionine beta-synthase and other proteins. LH59_16110 SM01240 LH59_16110 LH59_16230 SM00382 ATPases associated with a variety of cellular activities LH59_16235 SM00382 ATPases associated with a variety of cellular activities LH59_16275 SM00849 Metallo-beta-lactamase superfamily LH59_16280 SM00062 Bacterial periplasmic substrate-binding proteins LH59_16305 SM00729 Elongator protein 3, MiaB family, Radical SAM LH59_16390 SM00267 diguanylate cyclase LH59_16415 SM00477 DNA/RNA non-specific endonuclease LH59_16415 SM00892 DNA/RNA non-specific endonuclease LH59_16500 SM00387 Histidine kinase-like ATPases LH59_16500 SM00388 His Kinase A (phosphoacceptor) domain LH59_16500 SM00448 cheY-homologous receiver domain LH59_16505 SM00342 helix_turn_helix, arabinose operon control protein LH59_16505 SM00448 cheY-homologous receiver domain LH59_16515 SM00912 haemagglutination activity domain LH59_16540 SM01130 LH59_16540 LH59_16585 SM00387 Histidine kinase-like ATPases LH59_16585 SM00388 His Kinase A (phosphoacceptor) domain LH59_16590 SM00448 cheY-homologous receiver domain LH59_16590 SM00862 Transcriptional regulatory protein, C terminal LH59_16605 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LH59_16605 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LH59_16620 SM01211 LH59_16620 LH59_16645 SM00481 DNA polymerase alpha chain like domain LH59_16695 SM00849 Metallo-beta-lactamase superfamily LH59_16745 SM00345 helix_turn_helix gluconate operon transcriptional repressor LH59_16825 SM00883 Chaperonin 10 Kd subunit LH59_16845 SM00869 Autotransporter beta-domain LH59_16850 SM00028 Tetratricopeptide repeats LH59_16885 SM00327 von Willebrand factor (vWF) type A domain LH59_16890 SM00028 Tetratricopeptide repeats LH59_16890 SM00327 von Willebrand factor (vWF) type A domain LH59_16930 SM00965 Secretin and TonB N terminus short domain LH59_16965 SM00903 Flavin reductase like domain LH59_16975 SM00347 helix_turn_helix multiple antibiotic resistance protein LH59_17010 SM00382 ATPases associated with a variety of cellular activities LH59_17035 SM00448 cheY-homologous receiver domain LH59_17035 SM00862 Transcriptional regulatory protein, C terminal LH59_17040 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LH59_17040 SM00387 Histidine kinase-like ATPases LH59_17040 SM00388 His Kinase A (phosphoacceptor) domain LH59_17050 SM00382 ATPases associated with a variety of cellular activities LH59_17075 SM00937 LH59_17075 LH59_17080 SM00822 LH59_17080 LH59_17095 SM00345 helix_turn_helix gluconate operon transcriptional repressor LH59_17125 SM00382 ATPases associated with a variety of cellular activities LH59_17140 SM00382 ATPases associated with a variety of cellular activities LH59_17175 SM00271 DnaJ molecular chaperone homology domain LH59_17200 SM00226 Low molecular weight phosphatase family LH59_17205 SM00487 DEAD-like helicases superfamily LH59_17205 SM00490 helicase superfamily c-terminal domain LH59_17220 SM00382 ATPases associated with a variety of cellular activities LH59_17220 SM00464 Found in ATP-dependent protease La (LON) LH59_17225 SM00382 ATPases associated with a variety of cellular activities LH59_17225 SM00994 ClpX C4-type zinc finger LH59_17225 SM01086 C-terminal, D2-small domain, of ClpB protein LH59_17250 SM00357 Cold shock protein domain LH59_17260 SM00357 Cold shock protein domain LH59_17290 SM01119 LH59_17290 LH59_17335 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. LH59_17440 SM00232 JAB/MPN domain LH59_17620 SM00382 ATPases associated with a variety of cellular activities LH59_17635 SM00965 Secretin and TonB N terminus short domain LH59_17640 SM00965 Secretin and TonB N terminus short domain LH59_17660 SM00830 Chorismate mutase type II LH59_17695 SM00904 Riboflavin kinase LH59_17735 SM00346 helix_turn_helix isocitrate lyase regulation LH59_17765 SM00382 ATPases associated with a variety of cellular activities LH59_17780 SM00062 Bacterial periplasmic substrate-binding proteins LH59_17835 SM00382 ATPases associated with a variety of cellular activities LH59_17840 SM00382 ATPases associated with a variety of cellular activities LH59_17880 SM00382 ATPases associated with a variety of cellular activities LH59_17880 SM01086 C-terminal, D2-small domain, of ClpB protein LH59_17890 SM01359 LH59_17890 LH59_17890 SM01360 LH59_17890 LH59_17900 SM00357 Cold shock protein domain LH59_17920 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LH59_17920 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LH59_17930 SM00248 ankyrin repeats LH59_17975 SM00822 LH59_17975 LH59_18020 SM00345 helix_turn_helix gluconate operon transcriptional repressor LH59_18020 SM00895 LH59_18020 LH59_18025 SM01130 LH59_18025 LH59_18055 SM00382 ATPases associated with a variety of cellular activities LH59_18070 SM00347 helix_turn_helix multiple antibiotic resistance protein LH59_18105 SM00822 LH59_18105 LH59_18110 SM01005 Alanine racemase, C-terminal domain LH59_18190 SM00382 ATPases associated with a variety of cellular activities LH59_18190 SM01086 C-terminal, D2-small domain, of ClpB protein LH59_18200 SM00100 Cyclic nucleotide-monophosphate binding domain LH59_18200 SM00419 helix_turn_helix, cAMP Regulatory protein LH59_18260 SM00342 helix_turn_helix, arabinose operon control protein LH59_18265 SM00342 helix_turn_helix, arabinose operon control protein LH59_18305 SM00346 helix_turn_helix isocitrate lyase regulation LH59_18360 SM00062 Bacterial periplasmic substrate-binding proteins LH59_18365 SM00834 Putative regulatory protein LH59_18390 SM00344 helix_turn_helix ASNC type LH59_18400 SM00382 ATPases associated with a variety of cellular activities LH59_18505 SM00382 ATPases associated with a variety of cellular activities LH59_18525 SM00052 Putative diguanylate phosphodiesterase LH59_18525 SM00267 diguanylate cyclase LH59_18530 SM00363 S4 RNA-binding domain LH59_18560 SM00382 ATPases associated with a variety of cellular activities LH59_18560 SM00930 LH59_18560 LH59_18580 SM00342 helix_turn_helix, arabinose operon control protein LH59_18615 SM00345 helix_turn_helix gluconate operon transcriptional repressor LH59_18685 SM00382 ATPases associated with a variety of cellular activities LH59_18705 SM00342 helix_turn_helix, arabinose operon control protein LH59_18745 SM00357 Cold shock protein domain LH59_18755 SM00342 helix_turn_helix, arabinose operon control protein LH59_18790 SM00822 LH59_18790 LH59_18790 SM00823 Phosphopantetheine attachment site LH59_18790 SM00825 Beta-ketoacyl synthase LH59_18790 SM00826 LH59_18790 LH59_18790 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. LH59_18790 SM00829 Enoylreductase LH59_18790 SM01294 LH59_18790 LH59_18820 SM00091 PAS domain LH59_18820 SM00421 helix_turn_helix, Lux Regulon LH59_18850 SM00382 ATPases associated with a variety of cellular activities LH59_18855 SM00091 PAS domain LH59_18855 SM00387 Histidine kinase-like ATPases LH59_18860 SM00421 helix_turn_helix, Lux Regulon LH59_18860 SM00448 cheY-homologous receiver domain LH59_18875 SM00382 ATPases associated with a variety of cellular activities LH59_18880 SM01116 LH59_18880 LH59_18930 SM00560 LamG-like jellyroll fold domain LH59_18955 SM00965 Secretin and TonB N terminus short domain LH59_18960 SM00912 haemagglutination activity domain LH59_18975 SM00965 Secretin and TonB N terminus short domain LH59_18990 SM00530 Helix-turn-helix XRE-family like proteins LH59_18995 SM01007 Class II Aldolase and Adducin N-terminal domain LH59_19040 SM00881 CoA binding domain LH59_19050 SM00346 helix_turn_helix isocitrate lyase regulation LH59_19075 SM00267 diguanylate cyclase LH59_19080 SM00869 Autotransporter beta-domain LH59_19115 SM00421 helix_turn_helix, Lux Regulon LH59_19135 SM01060 LH59_19135 LH59_19165 SM00986 Uracil DNA glycosylase superfamily LH59_19165 SM00987 UreE urease accessory protein, C-terminal domain LH59_19170 SM00354 helix_turn _helix lactose operon repressor LH59_19215 SM00345 helix_turn_helix gluconate operon transcriptional repressor LH59_19245 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LH59_19260 SM00345 helix_turn_helix gluconate operon transcriptional repressor LH59_19290 SM00749 bacterial OsmY and nodulation domain LH59_19370 SM00155 Phospholipase D. Active site motifs. LH59_19385 SM00642 Alpha-amylase domain LH59_19390 SM00642 Alpha-amylase domain LH59_19395 SM00642 Alpha-amylase domain LH59_19400 SM00642 Alpha-amylase domain LH59_19405 SM00642 Alpha-amylase domain LH59_19415 SM00642 Alpha-amylase domain LH59_19430 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen LH59_19460 SM00345 helix_turn_helix gluconate operon transcriptional repressor LH59_19485 SM00382 ATPases associated with a variety of cellular activities LH59_19505 SM00100 Cyclic nucleotide-monophosphate binding domain LH59_19505 SM00419 helix_turn_helix, cAMP Regulatory protein LH59_19515 SM00421 helix_turn_helix, Lux Regulon LH59_19540 SM00346 helix_turn_helix isocitrate lyase regulation LH59_19555 SM00858 LH59_19555 LH59_19575 SM00382 ATPases associated with a variety of cellular activities LH59_19580 SM00062 Bacterial periplasmic substrate-binding proteins LH59_19585 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain LH59_19600 SM00861 Transketolase, pyrimidine binding domain LH59_19610 SM00345 helix_turn_helix gluconate operon transcriptional repressor LH59_19610 SM00895 LH59_19610 LH59_19645 SM00382 ATPases associated with a variety of cellular activities LH59_19650 SM00382 ATPases associated with a variety of cellular activities LH59_19655 SM00829 Enoylreductase LH59_19755 SM00841 Elongation factor P, C-terminal LH59_19755 SM01185 LH59_19755 LH59_19770 SM00382 ATPases associated with a variety of cellular activities LH59_19785 SM00028 Tetratricopeptide repeats LH59_19815 SM00858 LH59_19815 LH59_19855 SM00347 helix_turn_helix multiple antibiotic resistance protein LH59_19860 SM00382 ATPases associated with a variety of cellular activities LH59_19880 SM00318 Staphylococcal nuclease homologues LH59_19900 SM00345 helix_turn_helix gluconate operon transcriptional repressor LH59_20025 SM00421 helix_turn_helix, Lux Regulon LH59_20030 SM00421 helix_turn_helix, Lux Regulon LH59_20100 SM00347 helix_turn_helix multiple antibiotic resistance protein LH59_20105 SM00382 ATPases associated with a variety of cellular activities LH59_20125 SM00345 helix_turn_helix gluconate operon transcriptional repressor LH59_20125 SM00866 LH59_20125 LH59_20135 SM00882 Coenzyme A transferase LH59_20150 SM00346 helix_turn_helix isocitrate lyase regulation LH59_20170 SM00530 Helix-turn-helix XRE-family like proteins LH59_20200 SM00382 ATPases associated with a variety of cellular activities LH59_20220 SM00450 Rhodanese Homology Domain LH59_20230 SM00869 Autotransporter beta-domain LH59_20235 SM00387 Histidine kinase-like ATPases LH59_20235 SM00388 His Kinase A (phosphoacceptor) domain LH59_20235 SM00448 cheY-homologous receiver domain LH59_20240 SM00052 Putative diguanylate phosphodiesterase LH59_20240 SM00448 cheY-homologous receiver domain LH59_20245 SM00387 Histidine kinase-like ATPases LH59_20245 SM00388 His Kinase A (phosphoacceptor) domain LH59_20245 SM00448 cheY-homologous receiver domain LH59_20315 SM00478 endonuclease III LH59_20320 SM00840 LH59_20320 LH59_20325 SM00028 Tetratricopeptide repeats LH59_20350 SM01091 Transporter associated domain LH59_20360 SM00900 LH59_20360 LH59_20370 SM00710 Parallel beta-helix repeats LH59_20370 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses LH59_20375 SM00382 ATPases associated with a variety of cellular activities LH59_20415 SM00346 helix_turn_helix isocitrate lyase regulation LH59_20470 SM00382 ATPases associated with a variety of cellular activities LH59_20485 SM00345 helix_turn_helix gluconate operon transcriptional repressor LH59_20485 SM00895 LH59_20485 LH59_20525 SM00829 Enoylreductase LH59_20580 SM00533 DNA-binding domain of DNA mismatch repair MUTS family LH59_20580 SM00534 ATPase domain of DNA mismatch repair MUTS family LH59_20585 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. LH59_20605 SM01130 LH59_20605 LH59_20645 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor LH59_20690 SM00470 ParB-like nuclease domain LH59_20695 SM00387 Histidine kinase-like ATPases LH59_20695 SM00388 His Kinase A (phosphoacceptor) domain LH59_20700 SM00448 cheY-homologous receiver domain LH59_20700 SM00862 Transcriptional regulatory protein, C terminal LH59_20730 SM00869 Autotransporter beta-domain LH59_20765 SM00448 cheY-homologous receiver domain LH59_20765 SM00862 Transcriptional regulatory protein, C terminal LH59_20775 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LH59_20800 SM00155 Phospholipase D. Active site motifs. LH59_20835 SM00965 Secretin and TonB N terminus short domain LH59_20850 SM00530 Helix-turn-helix XRE-family like proteins LH59_20860 SM00345 helix_turn_helix gluconate operon transcriptional repressor LH59_20860 SM00895 LH59_20860 LH59_20875 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. LH59_20895 SM00448 cheY-homologous receiver domain LH59_20895 SM00862 Transcriptional regulatory protein, C terminal LH59_20900 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LH59_20900 SM00387 Histidine kinase-like ATPases LH59_20900 SM00388 His Kinase A (phosphoacceptor) domain LH59_20925 SM00382 ATPases associated with a variety of cellular activities LH59_20930 SM00382 ATPases associated with a variety of cellular activities LH59_20940 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain LH59_20955 SM00345 helix_turn_helix gluconate operon transcriptional repressor LH59_21010 SM00530 Helix-turn-helix XRE-family like proteins LH59_21030 SM00062 Bacterial periplasmic substrate-binding proteins LH59_21035 SM00382 ATPases associated with a variety of cellular activities LH59_21050 SM01130 LH59_21050 LH59_21055 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain LH59_21150 SM00342 helix_turn_helix, arabinose operon control protein LH59_21175 SM01329 LH59_21175 LH59_21190 SM00278 Helix-hairpin-helix DNA-binding motif class 1 LH59_21190 SM00465 GIY-YIG type nucleases (URI domain) LH59_21225 SM00862 Transcriptional regulatory protein, C terminal LH59_21245 SM00382 ATPases associated with a variety of cellular activities LH59_21300 SM00382 ATPases associated with a variety of cellular activities LH59_21340 SM00345 helix_turn_helix gluconate operon transcriptional repressor LH59_21340 SM00895 LH59_21340 LH59_21395 SM00382 ATPases associated with a variety of cellular activities LH59_21415 SM00354 helix_turn _helix lactose operon repressor LH59_21425 SM00382 ATPases associated with a variety of cellular activities LH59_21470 SM00382 ATPases associated with a variety of cellular activities LH59_21490 SM00936 Penicillin-binding protein 5, C-terminal domain LH59_21495 SM00411 bacterial (prokaryotic) histone like domain LH59_21500 SM00347 helix_turn_helix multiple antibiotic resistance protein LH59_21590 SM01007 Class II Aldolase and Adducin N-terminal domain LH59_21665 SM00479 LH59_21665 LH59_21675 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) LH59_21675 SM00091 PAS domain LH59_21675 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LH59_21685 SM00342 helix_turn_helix, arabinose operon control protein LH59_21695 SM00382 ATPases associated with a variety of cellular activities LH59_21725 SM00116 Domain in cystathionine beta-synthase and other proteins. LH59_21770 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. LH59_21795 SM00342 helix_turn_helix, arabinose operon control protein LH59_21860 SM00487 DEAD-like helicases superfamily LH59_21875 SM00382 ATPases associated with a variety of cellular activities LH59_21925 SM00382 ATPases associated with a variety of cellular activities LH59_21935 SM01103 LH59_21935 LH59_21945 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LH59_21945 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LH59_21970 SM00382 ATPases associated with a variety of cellular activities LH59_21980 SM00855 Phosphoglycerate mutase family LH59_21985 SM00822 LH59_21985 LH59_21995 SM00851 MGS-like domain LH59_21995 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LH59_22000 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain LH59_22015 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. LH59_22015 SM00387 Histidine kinase-like ATPases LH59_22015 SM00388 His Kinase A (phosphoacceptor) domain LH59_22020 SM00448 cheY-homologous receiver domain LH59_22040 SM00382 ATPases associated with a variety of cellular activities LH59_22055 SM00493 LH59_22055 LH59_22130 SM00347 helix_turn_helix multiple antibiotic resistance protein LH59_22165 SM00829 Enoylreductase LH59_22235 SM00530 Helix-turn-helix XRE-family like proteins LH59_22275 SM00382 ATPases associated with a variety of cellular activities LH59_22280 SM00382 ATPases associated with a variety of cellular activities LH59_22290 SM00062 Bacterial periplasmic substrate-binding proteins LH59_22300 SM00882 Coenzyme A transferase LH59_22305 SM00882 Coenzyme A transferase LH59_22310 SM00346 helix_turn_helix isocitrate lyase regulation LH59_22325 SM01001 AIR carboxylase LH59_22375 SM00382 ATPases associated with a variety of cellular activities LH59_22380 SM00382 ATPases associated with a variety of cellular activities LH59_22405 SM00345 helix_turn_helix gluconate operon transcriptional repressor LH59_22405 SM00866 LH59_22405 LH59_22420 SM00072 Guanylate kinase homologues. LH59_22455 SM00382 ATPases associated with a variety of cellular activities LH59_22465 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor LH59_22475 SM00316 Ribosomal protein S1-like RNA-binding domain LH59_22495 SM00852 Probable molybdopterin binding domain LH59_22530 SM00271 DnaJ molecular chaperone homology domain LH59_22590 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LH59_22595 SM00861 Transketolase, pyrimidine binding domain LH59_22620 SM00919 Malic enzyme, NAD binding domain LH59_22620 SM01274 LH59_22620 LH59_22675 SM00382 ATPases associated with a variety of cellular activities LH59_22710 SM00903 Flavin reductase like domain LH59_22720 SM00346 helix_turn_helix isocitrate lyase regulation LH59_22735 SM01323 LH59_22735 LH59_22755 SM00530 Helix-turn-helix XRE-family like proteins LH59_22765 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain LH59_22770 SM00014 Acid phosphatase homologues LH59_22775 SM00729 Elongator protein 3, MiaB family, Radical SAM LH59_22790 SM01091 Transporter associated domain LH59_22835 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) LH59_22835 SM00091 PAS domain LH59_22835 SM00421 helix_turn_helix, Lux Regulon LH59_22840 SM00729 Elongator protein 3, MiaB family, Radical SAM LH59_22840 SM00876 Biotin and Thiamin Synthesis associated domain LH59_22890 SM00852 Probable molybdopterin binding domain LH59_22895 SM00852 Probable molybdopterin binding domain LH59_22905 SM00729 Elongator protein 3, MiaB family, Radical SAM LH59_22920 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LH59_22925 SM00926 Molybdopterin oxidoreductase Fe4S4 domain LH59_22925 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LH59_22985 SM00387 Histidine kinase-like ATPases LH59_22990 SM00448 cheY-homologous receiver domain LH59_22990 SM00862 Transcriptional regulatory protein, C terminal LH59_23075 SM00796 Allophanate hydrolase subunit 1 LH59_23075 SM00797 Allophanate hydrolase subunit 2 LH59_23075 SM00878 Biotin carboxylase C-terminal domain LH59_23095 SM00567 E-Z type HEAT repeats LH59_23110 SM00382 ATPases associated with a variety of cellular activities LH59_23135 SM00421 helix_turn_helix, Lux Regulon LH59_23135 SM00448 cheY-homologous receiver domain LH59_23140 SM00387 Histidine kinase-like ATPases LH59_23150 SM00014 Acid phosphatase homologues LH59_23160 SM00342 helix_turn_helix, arabinose operon control protein LH59_23160 SM00478 endonuclease III LH59_23160 SM01009 AlkA N-terminal domain LH59_23170 SM00382 ATPases associated with a variety of cellular activities LH59_23260 SM00344 helix_turn_helix ASNC type LH59_23275 SM00062 Bacterial periplasmic substrate-binding proteins LH59_23285 SM00382 ATPases associated with a variety of cellular activities LH59_23290 SM00257 Lysin motif LH59_23325 SM00387 Histidine kinase-like ATPases LH59_23330 SM00448 cheY-homologous receiver domain LH59_23380 SM00919 Malic enzyme, NAD binding domain LH59_23380 SM01274 LH59_23380 LH59_23390 SM00342 helix_turn_helix, arabinose operon control protein LH59_23400 SM00873 B3/4 domain LH59_23430 SM00822 LH59_23430 LH59_23460 SM00530 Helix-turn-helix XRE-family like proteins LH59_23465 SM00155 Phospholipase D. Active site motifs. LH59_23485 SM00342 helix_turn_helix, arabinose operon control protein LH59_23540 SM00345 helix_turn_helix gluconate operon transcriptional repressor LH59_23540 SM00895 LH59_23540 LH59_23545 SM00965 Secretin and TonB N terminus short domain LH59_23560 SM00965 Secretin and TonB N terminus short domain LH59_23580 SM00052 Putative diguanylate phosphodiesterase LH59_23585 SM00244 prohibitin homologues LH59_23620 SM00342 helix_turn_helix, arabinose operon control protein LH59_23665 SM00965 Secretin and TonB N terminus short domain LH59_23700 SM00062 Bacterial periplasmic substrate-binding proteins LH59_23745 SM00342 helix_turn_helix, arabinose operon control protein LH59_23755 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor LH59_23755 SM00450 Rhodanese Homology Domain LH59_23790 SM00421 helix_turn_helix, Lux Regulon LH59_23790 SM00448 cheY-homologous receiver domain LH59_23805 SM00347 helix_turn_helix multiple antibiotic resistance protein LH59_23815 SM01012 LH59_23815 LH59_23880 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain LH59_23885 SM00342 helix_turn_helix, arabinose operon control protein LH59_23895 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LH59_23895 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LH59_23900 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. LH59_23900 SM00267 diguanylate cyclase LH59_23905 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor LH59_23925 SM00342 helix_turn_helix, arabinose operon control protein LH59_23940 SM00342 helix_turn_helix, arabinose operon control protein LH59_23950 SM01130 LH59_23950 LH59_23970 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor LH59_23970 SM00450 Rhodanese Homology Domain LH59_23995 SM01007 Class II Aldolase and Adducin N-terminal domain LH59_24055 SM00382 ATPases associated with a variety of cellular activities LH59_24060 SM00382 ATPases associated with a variety of cellular activities LH59_24070 SM00487 DEAD-like helicases superfamily LH59_24070 SM00490 helicase superfamily c-terminal domain LH59_24210 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain LH59_24235 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) LH59_24235 SM00091 PAS domain LH59_24235 SM00421 helix_turn_helix, Lux Regulon LH59_24255 SM00248 ankyrin repeats LH59_24280 SM00965 Secretin and TonB N terminus short domain LH59_24295 SM00883 Chaperonin 10 Kd subunit LH59_24310 SM00347 helix_turn_helix multiple antibiotic resistance protein LH59_24355 SM00382 ATPases associated with a variety of cellular activities LH59_24360 SM00382 ATPases associated with a variety of cellular activities LH59_24380 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family LH59_24420 SM00346 helix_turn_helix isocitrate lyase regulation LH59_24430 SM00382 ATPases associated with a variety of cellular activities LH59_24445 SM00869 Autotransporter beta-domain LH59_24450 SM00880 LH59_24450 LH59_24450 SM01118 LH59_24450 LH59_24455 SM00382 ATPases associated with a variety of cellular activities LH59_24455 SM00962 SRP54-type protein, GTPase domain LH59_24455 SM00963 SRP54-type protein, helical bundle domain LH59_24495 SM00347 helix_turn_helix multiple antibiotic resistance protein LH59_24505 SM00382 ATPases associated with a variety of cellular activities LH59_24540 SM01400 LH59_24540 LH59_24555 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LH59_24555 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LH59_24565 SM00028 Tetratricopeptide repeats LH59_24570 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain LH59_24570 SM01232 LH59_24570 LH59_24575 SM00849 Metallo-beta-lactamase superfamily LH59_24605 SM00563 Phosphate acyltransferases LH59_24615 SM00345 helix_turn_helix gluconate operon transcriptional repressor LH59_24615 SM00895 LH59_24615 LH59_24645 SM00014 Acid phosphatase homologues LH59_24650 SM00387 Histidine kinase-like ATPases LH59_24650 SM00388 His Kinase A (phosphoacceptor) domain LH59_24655 SM00448 cheY-homologous receiver domain LH59_24655 SM00862 Transcriptional regulatory protein, C terminal LH59_24720 SM00984 UDP binding domain LH59_24745 SM00052 Putative diguanylate phosphodiesterase LH59_24745 SM00267 diguanylate cyclase LH59_24755 SM00345 helix_turn_helix gluconate operon transcriptional repressor LH59_24790 SM00382 ATPases associated with a variety of cellular activities LH59_24865 SM00267 diguanylate cyclase LH59_24905 SM00450 Rhodanese Homology Domain LH59_24925 SM00530 Helix-turn-helix XRE-family like proteins LH59_24930 SM00862 Transcriptional regulatory protein, C terminal LH59_24945 SM00530 Helix-turn-helix XRE-family like proteins LH59_24960 SM00052 Putative diguanylate phosphodiesterase LH59_24985 SM00382 ATPases associated with a variety of cellular activities LH59_25000 SM00822 LH59_25000 LH59_25030 SM00345 helix_turn_helix gluconate operon transcriptional repressor LH59_25085 SM00849 Metallo-beta-lactamase superfamily LH59_25145 SM00345 helix_turn_helix gluconate operon transcriptional repressor LH59_25145 SM00895 LH59_25145 LH59_25180 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LH59_25180 SM00387 Histidine kinase-like ATPases LH59_25180 SM00388 His Kinase A (phosphoacceptor) domain LH59_25185 SM00421 helix_turn_helix, Lux Regulon LH59_25205 SM00849 Metallo-beta-lactamase superfamily LH59_25245 SM00100 Cyclic nucleotide-monophosphate binding domain LH59_25245 SM00419 helix_turn_helix, cAMP Regulatory protein LH59_25270 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain LH59_25355 SM00257 Lysin motif LH59_25360 SM00382 ATPases associated with a variety of cellular activities LH59_25360 SM00962 SRP54-type protein, GTPase domain LH59_25360 SM00963 SRP54-type protein, helical bundle domain LH59_25375 SM00644 LH59_25375 LH59_25425 SM00382 ATPases associated with a variety of cellular activities LH59_25450 SM00530 Helix-turn-helix XRE-family like proteins LH59_25465 SM00346 helix_turn_helix isocitrate lyase regulation LH59_25480 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain LH59_25490 SM00382 ATPases associated with a variety of cellular activities LH59_25515 SM00387 Histidine kinase-like ATPases LH59_25545 SM00062 Bacterial periplasmic substrate-binding proteins LH59_25595 SM00232 JAB/MPN domain LH59_25640 SM00530 Helix-turn-helix XRE-family like proteins LH59_25710 SM00530 Helix-turn-helix XRE-family like proteins LH59_25740 SM00382 ATPases associated with a variety of cellular activities LH59_25750 SM01130 LH59_25750 LH59_25755 SM00346 helix_turn_helix isocitrate lyase regulation LH59_25800 SM00858 LH59_25800 LH59_25805 SM00345 helix_turn_helix gluconate operon transcriptional repressor LH59_25805 SM00895 LH59_25805 LH59_25810 SM00822 LH59_25810 LH59_25835 SM00382 ATPases associated with a variety of cellular activities LH59_25840 SM00382 ATPases associated with a variety of cellular activities LH59_25845 SM00822 LH59_25845 LH59_25850 SM00861 Transketolase, pyrimidine binding domain LH59_25880 SM00342 helix_turn_helix, arabinose operon control protein LH59_25905 SM00052 Putative diguanylate phosphodiesterase LH59_25935 SM00346 helix_turn_helix isocitrate lyase regulation LH59_25940 SM00882 Coenzyme A transferase LH59_25945 SM00882 Coenzyme A transferase LH59_25980 SM00947 Carbonic anhydrase LH59_25985 SM00345 helix_turn_helix gluconate operon transcriptional repressor LH59_25985 SM00895 LH59_25985 LH59_26010 SM00382 ATPases associated with a variety of cellular activities LH59_26015 SM00382 ATPases associated with a variety of cellular activities LH59_26020 SM00822 LH59_26020 LH59_26025 SM00822 LH59_26025 LH59_26080 SM00346 helix_turn_helix isocitrate lyase regulation LH59_26135 SM00937 LH59_26135 LH59_26155 SM00344 helix_turn_helix ASNC type LH59_26200 SM00345 helix_turn_helix gluconate operon transcriptional repressor LH59_26200 SM00895 LH59_26200 LH59_26225 SM01007 Class II Aldolase and Adducin N-terminal domain LH59_26245 SM00422 helix_turn_helix, mercury resistance LH59_26260 SM00829 Enoylreductase LH59_26315 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase LH59_26320 SM00862 Transcriptional regulatory protein, C terminal LH59_26345 SM00345 helix_turn_helix gluconate operon transcriptional repressor LH59_26345 SM00895 LH59_26345 LH59_26350 SM00267 diguanylate cyclase LH59_26360 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. LH59_26360 SM00245 tail specific protease LH59_26370 SM00855 Phosphoglycerate mutase family LH59_26375 SM00450 Rhodanese Homology Domain LH59_26430 SM00448 cheY-homologous receiver domain LH59_26435 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LH59_26435 SM00387 Histidine kinase-like ATPases LH59_26435 SM00388 His Kinase A (phosphoacceptor) domain LH59_26455 SM00729 Elongator protein 3, MiaB family, Radical SAM LH59_26490 SM01118 LH59_26490 LH59_26520 SM00062 Bacterial periplasmic substrate-binding proteins LH59_26540 SM00460 Transglutaminase/protease-like homologues LH59_26580 SM00382 ATPases associated with a variety of cellular activities LH59_26585 SM00382 ATPases associated with a variety of cellular activities LH59_26615 SM00116 Domain in cystathionine beta-synthase and other proteins. LH59_26635 SM00382 ATPases associated with a variety of cellular activities LH59_26655 SM00345 helix_turn_helix gluconate operon transcriptional repressor LH59_26700 SM00749 bacterial OsmY and nodulation domain LH59_26775 SM00845 GatB domain LH59_26795 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LH59_26830 SM00382 ATPases associated with a variety of cellular activities LH59_26835 SM00382 ATPases associated with a variety of cellular activities LH59_26845 SM00347 helix_turn_helix multiple antibiotic resistance protein LH59_26850 SM00100 Cyclic nucleotide-monophosphate binding domain LH59_26860 SM00382 ATPases associated with a variety of cellular activities LH59_26885 SM00382 ATPases associated with a variety of cellular activities LH59_26910 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor LH59_26915 SM00849 Metallo-beta-lactamase superfamily LH59_26955 SM00646 LH59_26955 LH59_26985 SM00912 haemagglutination activity domain LH59_26995 SM00986 Uracil DNA glycosylase superfamily LH59_26995 SM00987 UreE urease accessory protein, C-terminal domain LH59_27000 SM00487 DEAD-like helicases superfamily LH59_27000 SM00490 helicase superfamily c-terminal domain LH59_27035 SM00460 Transglutaminase/protease-like homologues LH59_27060 SM00996 S-adenosyl-L-homocysteine hydrolase LH59_27060 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain LH59_27100 SM00344 helix_turn_helix ASNC type LH59_27165 SM00382 ATPases associated with a variety of cellular activities LH59_27180 SM00833 Cobalamin synthesis protein cobW C-terminal domain LH59_27195 SM00382 ATPases associated with a variety of cellular activities LH59_27195 SM01086 C-terminal, D2-small domain, of ClpB protein LH59_27210 SM00729 Elongator protein 3, MiaB family, Radical SAM LH59_27220 SM00671 Sel1-like repeats. LH59_27240 SM00936 Penicillin-binding protein 5, C-terminal domain LH59_27260 SM00382 ATPases associated with a variety of cellular activities LH59_27485 SM00155 Phospholipase D. Active site motifs. LH59_27505 SM00834 Putative regulatory protein LH59_27535 SM01130 LH59_27535 LH59_27540 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. LH59_27570 SM00345 helix_turn_helix gluconate operon transcriptional repressor LH59_27570 SM00895 LH59_27570 LH59_27595 SM00869 Autotransporter beta-domain LH59_27645 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. LH59_27665 SM01219 LH59_27665 LH59_27695 SM01004 Delta-aminolevulinic acid dehydratase LH59_27725 SM00662 RNA polymerases D LH59_27730 SM00363 S4 RNA-binding domain LH59_27730 SM01390 LH59_27730 LH59_27800 SM01374 LH59_27800 LH59_27815 SM00342 helix_turn_helix, arabinose operon control protein LH59_27825 SM00342 helix_turn_helix, arabinose operon control protein LH59_27840 SM00382 ATPases associated with a variety of cellular activities LH59_27845 SM00382 ATPases associated with a variety of cellular activities LH59_27880 SM00322 K homology RNA-binding domain LH59_27895 SM01382 LH59_27895 LH59_27895 SM01383 LH59_27895 LH59_27915 SM01403 LH59_27915 LH59_27925 SM00838 Elongation factor G C-terminus LH59_27925 SM00889 Elongation factor G, domain IV LH59_27940 SM00862 Transcriptional regulatory protein, C terminal LH59_27945 SM00448 cheY-homologous receiver domain LH59_27945 SM00862 Transcriptional regulatory protein, C terminal LH59_27955 SM00387 Histidine kinase-like ATPases LH59_27955 SM00388 His Kinase A (phosphoacceptor) domain LH59_27955 SM01080 LH59_27955 LH59_27970 SM00663 RNA polymerase I subunit A N-terminus LH59_27995 SM00649 Ribosomal protein L11/L12 LH59_28000 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. LH59_28000 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. LH59_28045 SM01230 LH59_28045 LH59_28060 SM00382 ATPases associated with a variety of cellular activities LH59_28070 SM00420 helix_turn_helix, Deoxyribose operon repressor LH59_28070 SM01134 LH59_28070 LH59_28080 SM00450 Rhodanese Homology Domain LH59_28100 SM00870 LH59_28100 LH59_28105 SM00470 ParB-like nuclease domain LH59_28125 SM01228 LH59_28125 LH59_28130 SM00357 Cold shock protein domain LH59_28160 SM00387 Histidine kinase-like ATPases LH59_28160 SM00388 His Kinase A (phosphoacceptor) domain LH59_28165 SM00448 cheY-homologous receiver domain LH59_28165 SM00862 Transcriptional regulatory protein, C terminal LH59_28205 SM00382 ATPases associated with a variety of cellular activities LH59_28210 SM00382 ATPases associated with a variety of cellular activities LH59_28235 SM01060 LH59_28235