AL504_00065 SM00857 Resolvase, N terminal domain AL504_00075 SM00342 helix_turn_helix, arabinose operon control protein AL504_00080 SM00342 helix_turn_helix, arabinose operon control protein AL504_00145 SM00382 ATPases associated with a variety of cellular activities AL504_00155 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL504_00155 SM00387 Histidine kinase-like ATPases AL504_00155 SM00388 His Kinase A (phosphoacceptor) domain AL504_00160 SM00448 cheY-homologous receiver domain AL504_00160 SM00862 Transcriptional regulatory protein, C terminal AL504_00185 SM00382 ATPases associated with a variety of cellular activities AL504_00215 SM00965 Secretin and TonB N terminus short domain AL504_00225 SM00347 helix_turn_helix multiple antibiotic resistance protein AL504_00235 SM00903 Flavin reductase like domain AL504_00280 SM00028 Tetratricopeptide repeats AL504_00280 SM00327 von Willebrand factor (vWF) type A domain AL504_00285 SM00327 von Willebrand factor (vWF) type A domain AL504_00375 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL504_00410 SM00849 Metallo-beta-lactamase superfamily AL504_00465 SM00481 DNA polymerase alpha chain like domain AL504_00475 SM00965 Secretin and TonB N terminus short domain AL504_00490 SM00912 haemagglutination activity domain AL504_00515 SM01211 AL504_00515 AL504_00520 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL504_00520 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL504_00535 SM00448 cheY-homologous receiver domain AL504_00535 SM00862 Transcriptional regulatory protein, C terminal AL504_00540 SM00387 Histidine kinase-like ATPases AL504_00540 SM00388 His Kinase A (phosphoacceptor) domain AL504_00590 SM01130 AL504_00590 AL504_00615 SM00912 haemagglutination activity domain AL504_00625 SM00342 helix_turn_helix, arabinose operon control protein AL504_00625 SM00448 cheY-homologous receiver domain AL504_00630 SM00387 Histidine kinase-like ATPases AL504_00630 SM00388 His Kinase A (phosphoacceptor) domain AL504_00630 SM00448 cheY-homologous receiver domain AL504_00720 SM00477 DNA/RNA non-specific endonuclease AL504_00720 SM00892 DNA/RNA non-specific endonuclease AL504_00745 SM00862 Transcriptional regulatory protein, C terminal AL504_00760 SM00267 diguanylate cyclase AL504_00770 SM00965 Secretin and TonB N terminus short domain AL504_00800 SM00903 Flavin reductase like domain AL504_00890 SM00729 Elongator protein 3, MiaB family, Radical SAM AL504_00895 SM00342 helix_turn_helix, arabinose operon control protein AL504_00930 SM00062 Bacterial periplasmic substrate-binding proteins AL504_00935 SM00849 Metallo-beta-lactamase superfamily AL504_00975 SM00382 ATPases associated with a variety of cellular activities AL504_00980 SM00382 ATPases associated with a variety of cellular activities AL504_01020 SM00869 Autotransporter beta-domain AL504_01100 SM00869 Autotransporter beta-domain AL504_01110 SM00116 Domain in cystathionine beta-synthase and other proteins. AL504_01110 SM01240 AL504_01110 AL504_01170 SM00829 Enoylreductase AL504_01175 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AL504_01180 SM00822 AL504_01180 AL504_01190 SM00829 Enoylreductase AL504_01205 SM00347 helix_turn_helix multiple antibiotic resistance protein AL504_01225 SM00342 helix_turn_helix, arabinose operon control protein AL504_01230 SM00822 AL504_01230 AL504_01250 SM00822 AL504_01250 AL504_01255 SM00342 helix_turn_helix, arabinose operon control protein AL504_01295 SM00342 helix_turn_helix, arabinose operon control protein AL504_01335 SM00422 helix_turn_helix, mercury resistance AL504_01375 SM00342 helix_turn_helix, arabinose operon control protein AL504_01390 SM01133 AL504_01390 AL504_01405 SM00382 ATPases associated with a variety of cellular activities AL504_01425 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL504_01425 SM00866 AL504_01425 AL504_01470 SM00990 AL504_01470 AL504_01475 SM00488 AL504_01475 AL504_01475 SM00491 AL504_01475 AL504_01505 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL504_01505 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL504_01510 SM00260 Two component signalling adaptor domain AL504_01515 SM00028 Tetratricopeptide repeats AL504_01515 SM00138 Methyltransferase, chemotaxis proteins AL504_01520 SM00260 Two component signalling adaptor domain AL504_01525 SM00073 Histidine Phosphotransfer domain AL504_01525 SM00260 Two component signalling adaptor domain AL504_01525 SM00387 Histidine kinase-like ATPases AL504_01525 SM00448 cheY-homologous receiver domain AL504_01530 SM00448 cheY-homologous receiver domain AL504_01535 SM00267 diguanylate cyclase AL504_01535 SM00448 cheY-homologous receiver domain AL504_01550 SM00382 ATPases associated with a variety of cellular activities AL504_01560 SM00344 helix_turn_helix ASNC type AL504_01580 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AL504_01620 SM00347 helix_turn_helix multiple antibiotic resistance protein AL504_01655 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL504_01655 SM00895 AL504_01655 AL504_01745 SM01192 AL504_01745 AL504_01745 SM01193 AL504_01745 AL504_01920 SM00382 ATPases associated with a variety of cellular activities AL504_01920 SM01086 C-terminal, D2-small domain, of ClpB protein AL504_02055 SM00903 Flavin reductase like domain AL504_02060 SM00346 helix_turn_helix isocitrate lyase regulation AL504_02075 SM00347 helix_turn_helix multiple antibiotic resistance protein AL504_02140 SM00342 helix_turn_helix, arabinose operon control protein AL504_02165 SM00530 Helix-turn-helix XRE-family like proteins AL504_02195 SM00342 helix_turn_helix, arabinose operon control protein AL504_02235 SM00346 helix_turn_helix isocitrate lyase regulation AL504_02240 SM00062 Bacterial periplasmic substrate-binding proteins AL504_02240 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AL504_02250 SM00382 ATPases associated with a variety of cellular activities AL504_02265 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AL504_02300 SM00344 helix_turn_helix ASNC type AL504_02350 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AL504_02350 SM00091 PAS domain AL504_02350 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL504_02350 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL504_02385 SM00487 DEAD-like helicases superfamily AL504_02385 SM00490 helicase superfamily c-terminal domain AL504_02390 SM00346 helix_turn_helix isocitrate lyase regulation AL504_02415 SM00869 Autotransporter beta-domain AL504_02430 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL504_02445 SM00382 ATPases associated with a variety of cellular activities AL504_02450 SM00062 Bacterial periplasmic substrate-binding proteins AL504_02460 SM00421 helix_turn_helix, Lux Regulon AL504_02460 SM00448 cheY-homologous receiver domain AL504_02465 SM00387 Histidine kinase-like ATPases AL504_02465 SM01049 AL504_02465 AL504_02485 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL504_02515 SM00869 Autotransporter beta-domain AL504_02545 SM00448 cheY-homologous receiver domain AL504_02545 SM00862 Transcriptional regulatory protein, C terminal AL504_02550 SM00387 Histidine kinase-like ATPases AL504_02550 SM00388 His Kinase A (phosphoacceptor) domain AL504_02575 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL504_02665 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AL504_02690 SM00729 Elongator protein 3, MiaB family, Radical SAM AL504_02695 SM00947 Carbonic anhydrase AL504_02705 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AL504_02705 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL504_02705 SM00387 Histidine kinase-like ATPases AL504_02710 SM00421 helix_turn_helix, Lux Regulon AL504_02710 SM00448 cheY-homologous receiver domain AL504_02735 SM00062 Bacterial periplasmic substrate-binding proteins AL504_02755 SM00342 helix_turn_helix, arabinose operon control protein AL504_02770 SM00382 ATPases associated with a variety of cellular activities AL504_02800 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL504_02800 SM00895 AL504_02800 AL504_02825 SM01130 AL504_02825 AL504_02830 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL504_02830 SM00895 AL504_02830 AL504_02840 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AL504_02940 SM00062 Bacterial periplasmic substrate-binding proteins AL504_02945 SM00062 Bacterial periplasmic substrate-binding proteins AL504_02970 SM00382 ATPases associated with a variety of cellular activities AL504_02995 SM00450 Rhodanese Homology Domain AL504_03000 SM00450 Rhodanese Homology Domain AL504_03025 SM00965 Secretin and TonB N terminus short domain AL504_03055 SM00421 helix_turn_helix, Lux Regulon AL504_03055 SM00448 cheY-homologous receiver domain AL504_03060 SM00387 Histidine kinase-like ATPases AL504_03060 SM00388 His Kinase A (phosphoacceptor) domain AL504_03065 SM00116 Domain in cystathionine beta-synthase and other proteins. AL504_03070 SM00347 helix_turn_helix multiple antibiotic resistance protein AL504_03085 SM00859 Semialdehyde dehydrogenase, NAD binding domain AL504_03095 SM00849 Metallo-beta-lactamase superfamily AL504_03135 SM00062 Bacterial periplasmic substrate-binding proteins AL504_03135 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AL504_03145 SM00382 ATPases associated with a variety of cellular activities AL504_03160 SM00965 Secretin and TonB N terminus short domain AL504_03170 SM00923 MbtH-like protein AL504_03190 SM00823 Phosphopantetheine attachment site AL504_03195 SM00823 Phosphopantetheine attachment site AL504_03205 SM00823 Phosphopantetheine attachment site AL504_03215 SM00823 Phosphopantetheine attachment site AL504_03215 SM00824 Thioesterase AL504_03240 SM01006 Siderophore biosynthesis protein domain AL504_03250 SM00382 ATPases associated with a variety of cellular activities AL504_03255 SM00382 ATPases associated with a variety of cellular activities AL504_03285 SM00342 helix_turn_helix, arabinose operon control protein AL504_03305 SM01006 Siderophore biosynthesis protein domain AL504_03315 SM00382 ATPases associated with a variety of cellular activities AL504_03335 SM00862 Transcriptional regulatory protein, C terminal AL504_03365 SM00448 cheY-homologous receiver domain AL504_03365 SM00862 Transcriptional regulatory protein, C terminal AL504_03370 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL504_03370 SM00387 Histidine kinase-like ATPases AL504_03370 SM00388 His Kinase A (phosphoacceptor) domain AL504_03380 SM00382 ATPases associated with a variety of cellular activities AL504_03400 SM00062 Bacterial periplasmic substrate-binding proteins AL504_03405 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL504_03405 SM00895 AL504_03405 AL504_03410 SM01130 AL504_03410 AL504_03420 SM01130 AL504_03420 AL504_03425 SM00858 AL504_03425 AL504_03435 SM00945 ProQ/FINO family AL504_03465 SM00382 ATPases associated with a variety of cellular activities AL504_03540 SM00382 ATPases associated with a variety of cellular activities AL504_03545 SM00382 ATPases associated with a variety of cellular activities AL504_03565 SM00062 Bacterial periplasmic substrate-binding proteins AL504_03580 SM00382 ATPases associated with a variety of cellular activities AL504_03595 SM00965 Secretin and TonB N terminus short domain AL504_03635 SM00342 helix_turn_helix, arabinose operon control protein AL504_03660 SM00091 PAS domain AL504_03660 SM00382 ATPases associated with a variety of cellular activities AL504_03695 SM00899 AL504_03695 AL504_03715 SM00869 Autotransporter beta-domain AL504_03795 SM00062 Bacterial periplasmic substrate-binding proteins AL504_03805 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL504_03860 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL504_03860 SM00895 AL504_03860 AL504_03900 SM00382 ATPases associated with a variety of cellular activities AL504_03905 SM00382 ATPases associated with a variety of cellular activities AL504_03915 SM00530 Helix-turn-helix XRE-family like proteins AL504_03940 SM00363 S4 RNA-binding domain AL504_03990 SM00267 diguanylate cyclase AL504_04000 SM00422 helix_turn_helix, mercury resistance AL504_04005 SM00267 diguanylate cyclase AL504_04065 SM00965 Secretin and TonB N terminus short domain AL504_04070 SM00912 haemagglutination activity domain AL504_04090 SM00382 ATPases associated with a variety of cellular activities AL504_04165 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL504_04165 SM00387 Histidine kinase-like ATPases AL504_04165 SM00388 His Kinase A (phosphoacceptor) domain AL504_04170 SM00869 Autotransporter beta-domain AL504_04190 SM01091 Transporter associated domain AL504_04240 SM00052 Putative diguanylate phosphodiesterase AL504_04315 SM00382 ATPases associated with a variety of cellular activities AL504_04315 SM00448 cheY-homologous receiver domain AL504_04320 SM00382 ATPases associated with a variety of cellular activities AL504_04335 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AL504_04335 SM00091 PAS domain AL504_04335 SM00387 Histidine kinase-like ATPases AL504_04335 SM00388 His Kinase A (phosphoacceptor) domain AL504_04335 SM00448 cheY-homologous receiver domain AL504_04340 SM00342 helix_turn_helix, arabinose operon control protein AL504_04365 SM00382 ATPases associated with a variety of cellular activities AL504_04370 SM00382 ATPases associated with a variety of cellular activities AL504_04400 SM00052 Putative diguanylate phosphodiesterase AL504_04400 SM00448 cheY-homologous receiver domain AL504_04425 SM00448 cheY-homologous receiver domain AL504_04425 SM00862 Transcriptional regulatory protein, C terminal AL504_04435 SM00382 ATPases associated with a variety of cellular activities AL504_04440 SM00342 helix_turn_helix, arabinose operon control protein AL504_04480 SM00344 helix_turn_helix ASNC type AL504_04490 SM00091 PAS domain AL504_04490 SM00267 diguanylate cyclase AL504_04505 SM00829 Enoylreductase AL504_04555 SM00382 ATPases associated with a variety of cellular activities AL504_04560 SM00382 ATPases associated with a variety of cellular activities AL504_04605 SM00382 ATPases associated with a variety of cellular activities AL504_04620 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL504_04620 SM00387 Histidine kinase-like ATPases AL504_04620 SM00388 His Kinase A (phosphoacceptor) domain AL504_04625 SM00448 cheY-homologous receiver domain AL504_04625 SM00862 Transcriptional regulatory protein, C terminal AL504_04640 SM00656 AL504_04640 AL504_04680 SM00984 UDP binding domain AL504_04695 SM00487 DEAD-like helicases superfamily AL504_04695 SM00490 helicase superfamily c-terminal domain AL504_04750 SM00382 ATPases associated with a variety of cellular activities AL504_04785 SM00382 ATPases associated with a variety of cellular activities AL504_04785 SM00448 cheY-homologous receiver domain AL504_04790 SM00091 PAS domain AL504_04790 SM00387 Histidine kinase-like ATPases AL504_04790 SM00388 His Kinase A (phosphoacceptor) domain AL504_04795 SM01230 AL504_04795 AL504_04800 SM00729 Elongator protein 3, MiaB family, Radical SAM AL504_04810 SM00052 Putative diguanylate phosphodiesterase AL504_04810 SM00267 diguanylate cyclase AL504_04860 SM00822 AL504_04860 AL504_04875 SM00072 Guanylate kinase homologues. AL504_04880 SM01409 AL504_04880 AL504_04885 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AL504_04885 SM00954 Region found in RelA / SpoT proteins AL504_04890 SM00342 helix_turn_helix, arabinose operon control protein AL504_04900 SM00382 ATPases associated with a variety of cellular activities AL504_04910 SM00062 Bacterial periplasmic substrate-binding proteins AL504_04910 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AL504_04955 SM00382 ATPases associated with a variety of cellular activities AL504_04960 SM00382 ATPases associated with a variety of cellular activities AL504_05040 SM00382 ATPases associated with a variety of cellular activities AL504_05055 SM00382 ATPases associated with a variety of cellular activities AL504_05085 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL504_05085 SM00895 AL504_05085 AL504_05115 SM00422 helix_turn_helix, mercury resistance AL504_05140 SM00257 Lysin motif AL504_05155 SM01207 AL504_05155 AL504_05190 SM00062 Bacterial periplasmic substrate-binding proteins AL504_05205 SM00382 ATPases associated with a variety of cellular activities AL504_05215 SM00382 ATPases associated with a variety of cellular activities AL504_05315 SM00344 helix_turn_helix ASNC type AL504_05395 SM00342 helix_turn_helix, arabinose operon control protein AL504_05410 SM00862 Transcriptional regulatory protein, C terminal AL504_05440 SM00382 ATPases associated with a variety of cellular activities AL504_05445 SM00382 ATPases associated with a variety of cellular activities AL504_05450 SM00420 helix_turn_helix, Deoxyribose operon repressor AL504_05450 SM01134 AL504_05450 AL504_05460 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AL504_05485 SM00382 ATPases associated with a variety of cellular activities AL504_05540 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AL504_05560 SM00347 helix_turn_helix multiple antibiotic resistance protein AL504_05605 SM00346 helix_turn_helix isocitrate lyase regulation AL504_05630 SM00481 DNA polymerase alpha chain like domain AL504_05700 SM00382 ATPases associated with a variety of cellular activities AL504_05715 SM00062 Bacterial periplasmic substrate-binding proteins AL504_05745 SM00869 Autotransporter beta-domain AL504_05780 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL504_05780 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL504_05810 SM00464 Found in ATP-dependent protease La (LON) AL504_05830 SM01012 AL504_05830 AL504_05840 SM00382 ATPases associated with a variety of cellular activities AL504_05880 SM00342 helix_turn_helix, arabinose operon control protein AL504_05900 SM00346 helix_turn_helix isocitrate lyase regulation AL504_06010 SM00267 diguanylate cyclase AL504_06015 SM00244 prohibitin homologues AL504_06030 SM00342 helix_turn_helix, arabinose operon control protein AL504_06100 SM00935 Outer membrane protein (OmpH-like) AL504_06110 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AL504_06155 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AL504_06275 SM00382 ATPases associated with a variety of cellular activities AL504_06325 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AL504_06325 SM00091 PAS domain AL504_06325 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL504_06325 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL504_06330 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL504_06330 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL504_06340 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL504_06340 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL504_06345 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL504_06345 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL504_06360 SM00047 Lysozyme subfamily 2 AL504_06405 SM00858 AL504_06405 AL504_06420 SM00382 ATPases associated with a variety of cellular activities AL504_06420 SM00962 SRP54-type protein, GTPase domain AL504_06435 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL504_06445 SM00448 cheY-homologous receiver domain AL504_06450 SM00448 cheY-homologous receiver domain AL504_06455 SM00138 Methyltransferase, chemotaxis proteins AL504_06460 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL504_06460 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL504_06465 SM00260 Two component signalling adaptor domain AL504_06475 SM00448 cheY-homologous receiver domain AL504_06515 SM00028 Tetratricopeptide repeats AL504_06605 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AL504_06605 SM00091 PAS domain AL504_06605 SM00387 Histidine kinase-like ATPases AL504_06605 SM00388 His Kinase A (phosphoacceptor) domain AL504_06610 SM00421 helix_turn_helix, Lux Regulon AL504_06610 SM00448 cheY-homologous receiver domain AL504_06660 SM00363 S4 RNA-binding domain AL504_06685 SM00829 Enoylreductase AL504_06695 SM01322 AL504_06695 AL504_06700 SM00382 ATPases associated with a variety of cellular activities AL504_06800 SM00382 ATPases associated with a variety of cellular activities AL504_06815 SM00938 Nitrogen regulatory protein P-II AL504_06850 SM00861 Transketolase, pyrimidine binding domain AL504_06860 SM00965 Secretin and TonB N terminus short domain AL504_06885 SM00422 helix_turn_helix, mercury resistance AL504_06925 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL504_06925 SM00895 AL504_06925 AL504_07035 SM00354 helix_turn _helix lactose operon repressor AL504_07050 SM00382 ATPases associated with a variety of cellular activities AL504_07055 SM00382 ATPases associated with a variety of cellular activities AL504_07160 SM00382 ATPases associated with a variety of cellular activities AL504_07185 SM00822 AL504_07185 AL504_07200 SM00346 helix_turn_helix isocitrate lyase regulation AL504_07215 SM00382 ATPases associated with a variety of cellular activities AL504_07225 SM00344 helix_turn_helix ASNC type AL504_07235 SM00342 helix_turn_helix, arabinose operon control protein AL504_07265 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL504_07265 SM00866 AL504_07265 AL504_07285 SM01007 Class II Aldolase and Adducin N-terminal domain AL504_07305 SM00342 helix_turn_helix, arabinose operon control protein AL504_07325 SM00822 AL504_07325 AL504_07385 SM00052 Putative diguanylate phosphodiesterase AL504_07385 SM00091 PAS domain AL504_07385 SM00267 diguanylate cyclase AL504_07400 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL504_07400 SM00895 AL504_07400 AL504_07430 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AL504_07445 SM00382 ATPases associated with a variety of cellular activities AL504_07475 SM00028 Tetratricopeptide repeats AL504_07480 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AL504_07510 SM00382 ATPases associated with a variety of cellular activities AL504_07555 SM00986 Uracil DNA glycosylase superfamily AL504_07555 SM00987 UreE urease accessory protein, C-terminal domain AL504_07590 SM00342 helix_turn_helix, arabinose operon control protein AL504_07615 SM00342 helix_turn_helix, arabinose operon control protein AL504_07640 SM00903 Flavin reductase like domain AL504_07680 SM00822 AL504_07680 AL504_07720 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL504_07760 SM00100 Cyclic nucleotide-monophosphate binding domain AL504_07760 SM00419 helix_turn_helix, cAMP Regulatory protein AL504_07780 SM00347 helix_turn_helix multiple antibiotic resistance protein AL504_07790 SM00100 Cyclic nucleotide-monophosphate binding domain AL504_07815 SM00382 ATPases associated with a variety of cellular activities AL504_07875 SM00342 helix_turn_helix, arabinose operon control protein AL504_07915 SM00563 Phosphate acyltransferases AL504_07975 SM00825 Beta-ketoacyl synthase AL504_07985 SM00822 AL504_07985 AL504_07990 SM00825 Beta-ketoacyl synthase AL504_08030 SM00267 diguanylate cyclase AL504_08035 SM00028 Tetratricopeptide repeats AL504_08060 SM00342 helix_turn_helix, arabinose operon control protein AL504_08090 SM00382 ATPases associated with a variety of cellular activities AL504_08120 SM00382 ATPases associated with a variety of cellular activities AL504_08130 SM00062 Bacterial periplasmic substrate-binding proteins AL504_08180 SM00344 helix_turn_helix ASNC type AL504_08215 SM00248 ankyrin repeats AL504_08275 SM00422 helix_turn_helix, mercury resistance AL504_08280 SM00411 bacterial (prokaryotic) histone like domain AL504_08285 SM00873 B3/4 domain AL504_08285 SM00874 tRNA synthetase B5 domain AL504_08285 SM00896 Ferredoxin-fold anticodon binding domain AL504_08305 SM00382 ATPases associated with a variety of cellular activities AL504_08320 SM00938 Nitrogen regulatory protein P-II AL504_08355 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AL504_08365 SM00421 helix_turn_helix, Lux Regulon AL504_08365 SM00448 cheY-homologous receiver domain AL504_08370 SM00729 Elongator protein 3, MiaB family, Radical SAM AL504_08375 SM00422 helix_turn_helix, mercury resistance AL504_08390 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL504_08390 SM00895 AL504_08390 AL504_08425 SM00382 ATPases associated with a variety of cellular activities AL504_08445 SM00354 helix_turn _helix lactose operon repressor AL504_08490 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AL504_08535 SM00859 Semialdehyde dehydrogenase, NAD binding domain AL504_08540 SM01329 AL504_08540 AL504_08565 SM00052 Putative diguanylate phosphodiesterase AL504_08565 SM00267 diguanylate cyclase AL504_08570 SM00052 Putative diguanylate phosphodiesterase AL504_08570 SM00267 diguanylate cyclase AL504_08575 SM00387 Histidine kinase-like ATPases AL504_08575 SM00388 His Kinase A (phosphoacceptor) domain AL504_08580 SM00448 cheY-homologous receiver domain AL504_08580 SM00862 Transcriptional regulatory protein, C terminal AL504_08600 SM00116 Domain in cystathionine beta-synthase and other proteins. AL504_08630 SM00240 Forkhead associated domain AL504_08640 SM00858 AL504_08640 AL504_08695 SM01040 BRO family, N-terminal domain AL504_09005 SM00400 zinc finger AL504_09005 SM00493 AL504_09005 AL504_09005 SM00766 DNA primase DnaG DnaB-binding AL504_09020 SM00788 Adenylosuccinate synthetase AL504_09030 SM00244 prohibitin homologues AL504_09035 SM00244 prohibitin homologues AL504_09055 SM00382 ATPases associated with a variety of cellular activities AL504_09060 SM00564 beta-propeller repeat AL504_09090 SM00562 AL504_09090 AL504_09105 SM00382 ATPases associated with a variety of cellular activities AL504_09115 SM00062 Bacterial periplasmic substrate-binding proteins AL504_09115 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AL504_09120 SM00530 Helix-turn-helix XRE-family like proteins AL504_09150 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AL504_09210 SM00347 helix_turn_helix multiple antibiotic resistance protein AL504_09235 SM00434 DNA Topoisomerase IV AL504_09245 SM00387 Histidine kinase-like ATPases AL504_09245 SM00433 TopoisomeraseII AL504_09255 SM00357 Cold shock protein domain AL504_09255 SM00382 ATPases associated with a variety of cellular activities AL504_09255 SM00959 Rho termination factor, N-terminal domain AL504_09280 SM00342 helix_turn_helix, arabinose operon control protein AL504_09320 SM00829 Enoylreductase AL504_09335 SM00347 helix_turn_helix multiple antibiotic resistance protein AL504_09360 SM01329 AL504_09360 AL504_09375 SM01209 AL504_09375 AL504_09375 SM01210 AL504_09375 AL504_09410 SM00387 Histidine kinase-like ATPases AL504_09410 SM00388 His Kinase A (phosphoacceptor) domain AL504_09415 SM00382 ATPases associated with a variety of cellular activities AL504_09415 SM00448 cheY-homologous receiver domain AL504_09445 SM00316 Ribosomal protein S1-like RNA-binding domain AL504_09770 SM00267 diguanylate cyclase AL504_09775 SM00267 diguanylate cyclase AL504_09790 SM00382 ATPases associated with a variety of cellular activities AL504_09840 SM00481 DNA polymerase alpha chain like domain AL504_09850 SM00382 ATPases associated with a variety of cellular activities AL504_09860 SM00382 ATPases associated with a variety of cellular activities AL504_09860 SM00487 DEAD-like helicases superfamily AL504_09860 SM00490 helicase superfamily c-terminal domain AL504_09860 SM00847 Helicase associated domain (HA2) Add an annotation AL504_09930 SM00382 ATPases associated with a variety of cellular activities AL504_10015 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL504_10015 SM00387 Histidine kinase-like ATPases AL504_10015 SM00388 His Kinase A (phosphoacceptor) domain AL504_10020 SM00448 cheY-homologous receiver domain AL504_10020 SM00862 Transcriptional regulatory protein, C terminal AL504_10050 SM00387 Histidine kinase-like ATPases AL504_10050 SM00388 His Kinase A (phosphoacceptor) domain AL504_10055 SM00448 cheY-homologous receiver domain AL504_10055 SM00862 Transcriptional regulatory protein, C terminal AL504_10080 SM00411 bacterial (prokaryotic) histone like domain AL504_10085 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AL504_10095 SM00967 RNA 2'-O ribose methyltransferase substrate binding AL504_10100 SM00316 Ribosomal protein S1-like RNA-binding domain AL504_10100 SM00357 Cold shock protein domain AL504_10100 SM00955 AL504_10100 AL504_10110 SM01144 AL504_10110 AL504_10145 SM00155 Phospholipase D. Active site motifs. AL504_10210 SM00267 diguanylate cyclase AL504_10400 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AL504_10400 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AL504_10445 SM00528 Domain in histone-like proteins of HNS family AL504_10500 SM00670 Large family of predicted nucleotide-binding domains AL504_10515 SM00886 Stress responsive A/B Barrel Domain AL504_10525 SM00382 ATPases associated with a variety of cellular activities AL504_10530 SM00382 ATPases associated with a variety of cellular activities AL504_10535 SM00822 AL504_10535 AL504_10555 SM00346 helix_turn_helix isocitrate lyase regulation AL504_10595 SM00881 CoA binding domain AL504_10630 SM00382 ATPases associated with a variety of cellular activities AL504_10635 SM00448 cheY-homologous receiver domain AL504_10635 SM00862 Transcriptional regulatory protein, C terminal AL504_10640 SM00387 Histidine kinase-like ATPases AL504_10640 SM00388 His Kinase A (phosphoacceptor) domain AL504_10660 SM00267 diguanylate cyclase AL504_10725 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL504_10750 SM00344 helix_turn_helix ASNC type AL504_10770 SM00382 ATPases associated with a variety of cellular activities AL504_10810 SM00861 Transketolase, pyrimidine binding domain AL504_10825 SM00346 helix_turn_helix isocitrate lyase regulation AL504_10865 SM00382 ATPases associated with a variety of cellular activities AL504_10880 SM00450 Rhodanese Homology Domain AL504_10925 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AL504_10925 SM00474 3'-5' exonuclease AL504_10925 SM00475 5'-3' exonuclease AL504_10925 SM00479 AL504_10925 AL504_10925 SM00482 DNA polymerase A domain AL504_10980 SM00316 Ribosomal protein S1-like RNA-binding domain AL504_10990 SM00363 S4 RNA-binding domain AL504_11010 SM00833 Cobalamin synthesis protein cobW C-terminal domain AL504_11015 SM00833 Cobalamin synthesis protein cobW C-terminal domain AL504_11030 SM00448 cheY-homologous receiver domain AL504_11030 SM00862 Transcriptional regulatory protein, C terminal AL504_11035 SM00387 Histidine kinase-like ATPases AL504_11035 SM00388 His Kinase A (phosphoacceptor) domain AL504_11040 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AL504_11145 SM00479 AL504_11145 AL504_11180 SM00729 Elongator protein 3, MiaB family, Radical SAM AL504_11200 SM00382 ATPases associated with a variety of cellular activities AL504_11245 SM00893 Electron transfer flavoprotein domain AL504_11250 SM00893 Electron transfer flavoprotein domain AL504_11270 SM00346 helix_turn_helix isocitrate lyase regulation AL504_11285 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AL504_11310 SM00411 bacterial (prokaryotic) histone like domain AL504_11315 SM00316 Ribosomal protein S1-like RNA-binding domain AL504_11340 SM00830 Chorismate mutase type II AL504_11350 SM00434 DNA Topoisomerase IV AL504_11410 SM00382 ATPases associated with a variety of cellular activities AL504_11420 SM01209 AL504_11420 AL504_11430 SM00749 bacterial OsmY and nodulation domain AL504_11480 SM00822 AL504_11480 AL504_11495 SM00363 S4 RNA-binding domain AL504_11505 SM00491 AL504_11505 AL504_11510 SM00316 Ribosomal protein S1-like RNA-binding domain AL504_11510 SM00732 Likely ribonuclease with RNase H fold. AL504_11545 SM00965 Secretin and TonB N terminus short domain AL504_11575 SM00861 Transketolase, pyrimidine binding domain AL504_11580 SM00344 helix_turn_helix ASNC type AL504_11610 SM00861 Transketolase, pyrimidine binding domain AL504_11615 SM00919 Malic enzyme, NAD binding domain AL504_11615 SM01274 AL504_11615 AL504_11660 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL504_11660 SM00866 AL504_11660 AL504_11740 SM01192 AL504_11740 AL504_11740 SM01193 AL504_11740 AL504_11790 SM00382 ATPases associated with a variety of cellular activities AL504_11810 SM00882 Coenzyme A transferase AL504_11815 SM00882 Coenzyme A transferase AL504_11845 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL504_11845 SM00895 AL504_11845 AL504_11980 SM00358 Double-stranded RNA binding motif AL504_11980 SM00535 Ribonuclease III family AL504_11990 SM00838 Elongation factor G C-terminus AL504_11995 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AL504_12020 SM00825 Beta-ketoacyl synthase AL504_12030 SM00822 AL504_12030 AL504_12035 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AL504_12070 SM00644 AL504_12070 AL504_12090 SM00363 S4 RNA-binding domain AL504_12095 SM00316 Ribosomal protein S1-like RNA-binding domain AL504_12140 SM00954 Region found in RelA / SpoT proteins AL504_12185 SM00478 endonuclease III AL504_12185 SM00525 AL504_12185 AL504_12190 SM00382 ATPases associated with a variety of cellular activities AL504_12195 SM00382 ATPases associated with a variety of cellular activities AL504_12230 SM01022 AL504_12230 AL504_12235 SM00382 ATPases associated with a variety of cellular activities AL504_12240 SM00382 ATPases associated with a variety of cellular activities AL504_12270 SM00382 ATPases associated with a variety of cellular activities AL504_12295 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AL504_12295 SM00292 breast cancer carboxy-terminal domain AL504_12295 SM00532 Ligase N family AL504_12300 SM00771 ZipA, C-terminal domain (FtsZ-binding) AL504_12305 SM00968 SMC proteins Flexible Hinge Domain AL504_12315 SM00986 Uracil DNA glycosylase superfamily AL504_12315 SM00987 UreE urease accessory protein, C-terminal domain AL504_12325 SM00448 cheY-homologous receiver domain AL504_12325 SM00862 Transcriptional regulatory protein, C terminal AL504_12330 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL504_12330 SM00387 Histidine kinase-like ATPases AL504_12330 SM00388 His Kinase A (phosphoacceptor) domain AL504_12360 SM00487 DEAD-like helicases superfamily AL504_12360 SM00490 helicase superfamily c-terminal domain AL504_12360 SM00982 AL504_12360 AL504_12360 SM01058 CarD-like/TRCF domain AL504_12370 SM00912 haemagglutination activity domain AL504_12425 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AL504_12430 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AL504_12480 SM00014 Acid phosphatase homologues AL504_12575 SM00346 helix_turn_helix isocitrate lyase regulation AL504_12610 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL504_12610 SM00895 AL504_12610 AL504_12615 SM00382 ATPases associated with a variety of cellular activities AL504_12635 SM00344 helix_turn_helix ASNC type AL504_12655 SM00382 ATPases associated with a variety of cellular activities AL504_12660 SM00965 Secretin and TonB N terminus short domain AL504_12685 SM00822 AL504_12685 AL504_12690 SM00530 Helix-turn-helix XRE-family like proteins AL504_12695 SM00822 AL504_12695 AL504_12705 SM00448 cheY-homologous receiver domain AL504_12705 SM00862 Transcriptional regulatory protein, C terminal AL504_12710 SM00387 Histidine kinase-like ATPases AL504_12710 SM00388 His Kinase A (phosphoacceptor) domain AL504_12720 SM00421 helix_turn_helix, Lux Regulon AL504_12720 SM00448 cheY-homologous receiver domain AL504_12725 SM00387 Histidine kinase-like ATPases AL504_12725 SM00388 His Kinase A (phosphoacceptor) domain AL504_12735 SM00831 Cation transporter/ATPase, N-terminus AL504_12760 SM00965 Secretin and TonB N terminus short domain AL504_12775 SM00965 Secretin and TonB N terminus short domain AL504_12800 SM00382 ATPases associated with a variety of cellular activities AL504_12815 SM00100 Cyclic nucleotide-monophosphate binding domain AL504_12815 SM00419 helix_turn_helix, cAMP Regulatory protein AL504_12845 SM00382 ATPases associated with a variety of cellular activities AL504_12885 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL504_12920 SM00829 Enoylreductase AL504_13000 SM00316 Ribosomal protein S1-like RNA-binding domain AL504_13000 SM00322 K homology RNA-binding domain AL504_13005 SM01387 AL504_13005 AL504_13065 SM01130 AL504_13065 AL504_13070 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AL504_13105 SM00382 ATPases associated with a variety of cellular activities AL504_13115 SM01119 AL504_13115 AL504_13135 SM00382 ATPases associated with a variety of cellular activities AL504_13140 SM00382 ATPases associated with a variety of cellular activities AL504_13165 SM00382 ATPases associated with a variety of cellular activities AL504_13165 SM00843 AL504_13165 AL504_13175 SM00463 Small MutS-related domain AL504_13215 SM00387 Histidine kinase-like ATPases AL504_13215 SM00388 His Kinase A (phosphoacceptor) domain AL504_13220 SM00448 cheY-homologous receiver domain AL504_13220 SM00862 Transcriptional regulatory protein, C terminal AL504_13235 SM01130 AL504_13235 AL504_13240 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL504_13240 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL504_13240 SM01049 AL504_13240 AL504_13255 SM01329 AL504_13255 AL504_13275 SM00382 ATPases associated with a variety of cellular activities AL504_13310 SM00271 DnaJ molecular chaperone homology domain AL504_13395 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL504_13475 SM00346 helix_turn_helix isocitrate lyase regulation AL504_13480 SM00852 Probable molybdopterin binding domain AL504_13495 SM00487 DEAD-like helicases superfamily AL504_13495 SM00490 helicase superfamily c-terminal domain AL504_13500 SM00342 helix_turn_helix, arabinose operon control protein AL504_13570 SM00831 Cation transporter/ATPase, N-terminus AL504_13585 SM01011 Aminopeptidase P, N-terminal domain AL504_13610 SM00798 AICARFT/IMPCHase bienzyme AL504_13610 SM00851 MGS-like domain AL504_13620 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AL504_13635 SM00382 ATPases associated with a variety of cellular activities AL504_13640 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL504_13640 SM00387 Histidine kinase-like ATPases AL504_13645 SM00448 cheY-homologous receiver domain AL504_13645 SM00862 Transcriptional regulatory protein, C terminal AL504_13655 SM00341 Helicase and RNase D C-terminal AL504_13655 SM00487 DEAD-like helicases superfamily AL504_13655 SM00490 helicase superfamily c-terminal domain AL504_13655 SM00956 AL504_13655 AL504_13690 SM00346 helix_turn_helix isocitrate lyase regulation AL504_13720 SM00382 ATPases associated with a variety of cellular activities AL504_13735 SM00342 helix_turn_helix, arabinose operon control protein AL504_13745 SM00382 ATPases associated with a variety of cellular activities AL504_13750 SM00382 ATPases associated with a variety of cellular activities AL504_13770 SM00347 helix_turn_helix multiple antibiotic resistance protein AL504_13820 SM00822 AL504_13820 AL504_13835 SM00382 ATPases associated with a variety of cellular activities AL504_13840 SM00382 ATPases associated with a variety of cellular activities AL504_13870 SM00346 helix_turn_helix isocitrate lyase regulation AL504_13875 SM00382 ATPases associated with a variety of cellular activities AL504_13935 SM00382 ATPases associated with a variety of cellular activities AL504_13960 SM00903 Flavin reductase like domain AL504_14060 SM00646 AL504_14060 AL504_14190 SM00822 AL504_14190 AL504_14205 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AL504_14205 SM00091 PAS domain AL504_14205 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL504_14235 SM00563 Phosphate acyltransferases AL504_14280 SM00650 Ribosomal RNA adenine dimethylases AL504_14320 SM00347 helix_turn_helix multiple antibiotic resistance protein AL504_14345 SM00965 Secretin and TonB N terminus short domain AL504_14365 SM00822 AL504_14365 AL504_14375 SM00267 diguanylate cyclase AL504_14405 SM00342 helix_turn_helix, arabinose operon control protein AL504_14425 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL504_14425 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL504_14460 SM00382 ATPases associated with a variety of cellular activities AL504_14485 SM00382 ATPases associated with a variety of cellular activities AL504_14485 SM00930 AL504_14485 AL504_14535 SM00116 Domain in cystathionine beta-synthase and other proteins. AL504_14535 SM00924 MgtE intracellular N domain AL504_14550 SM00344 helix_turn_helix ASNC type AL504_14575 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL504_14575 SM00895 AL504_14575 AL504_14585 SM00957 SecA DEAD-like domain AL504_14585 SM00958 SecA preprotein cross-linking domain AL504_14605 SM00864 Tubulin/FtsZ family, GTPase domain AL504_14605 SM00865 Tubulin/FtsZ family, C-terminal domain AL504_14610 SM00842 Cell division protein FtsA AL504_14680 SM00382 ATPases associated with a variety of cellular activities AL504_14695 SM00151 SWI complex, BAF60b domains AL504_14740 SM00344 helix_turn_helix ASNC type AL504_14835 SM00387 Histidine kinase-like ATPases AL504_14835 SM00388 His Kinase A (phosphoacceptor) domain AL504_14840 SM00448 cheY-homologous receiver domain AL504_14840 SM00862 Transcriptional regulatory protein, C terminal AL504_14895 SM00382 ATPases associated with a variety of cellular activities AL504_14910 SM00344 helix_turn_helix ASNC type AL504_14920 SM00838 Elongation factor G C-terminus AL504_14920 SM00889 Elongation factor G, domain IV AL504_14935 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL504_14970 SM01130 AL504_14970 AL504_14975 SM00382 ATPases associated with a variety of cellular activities AL504_14980 SM00382 ATPases associated with a variety of cellular activities AL504_15000 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL504_15000 SM00895 AL504_15000 AL504_15065 SM00479 AL504_15065 AL504_15090 SM00849 Metallo-beta-lactamase superfamily AL504_15095 SM00257 Lysin motif AL504_15145 SM01005 Alanine racemase, C-terminal domain AL504_15155 SM00331 Sigma factor PP2C-like phosphatases AL504_15155 SM01049 AL504_15155 AL504_15220 SM00382 ATPases associated with a variety of cellular activities AL504_15265 SM00028 Tetratricopeptide repeats AL504_15385 SM00763 PrkA AAA domain AL504_15410 SM00342 helix_turn_helix, arabinose operon control protein AL504_15435 SM00363 S4 RNA-binding domain AL504_15460 SM00859 Semialdehyde dehydrogenase, NAD binding domain AL504_15475 SM00382 ATPases associated with a variety of cellular activities AL504_15480 SM00382 ATPases associated with a variety of cellular activities AL504_15525 SM00382 ATPases associated with a variety of cellular activities AL504_15575 SM00344 helix_turn_helix ASNC type AL504_15650 SM00878 Biotin carboxylase C-terminal domain AL504_15680 SM00955 AL504_15680 AL504_15685 SM00448 cheY-homologous receiver domain AL504_15685 SM00862 Transcriptional regulatory protein, C terminal AL504_15690 SM00387 Histidine kinase-like ATPases AL504_15690 SM00388 His Kinase A (phosphoacceptor) domain AL504_15705 SM00382 ATPases associated with a variety of cellular activities AL504_15740 SM00382 ATPases associated with a variety of cellular activities AL504_15755 SM00062 Bacterial periplasmic substrate-binding proteins AL504_15775 SM00563 Phosphate acyltransferases AL504_15790 SM00732 Likely ribonuclease with RNase H fold. AL504_15860 SM00342 helix_turn_helix, arabinose operon control protein AL504_15900 SM00052 Putative diguanylate phosphodiesterase AL504_15900 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AL504_15900 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AL504_15900 SM00091 PAS domain AL504_15900 SM00267 diguanylate cyclase AL504_15905 SM00267 diguanylate cyclase AL504_15920 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL504_15920 SM00331 Sigma factor PP2C-like phosphatases AL504_15925 SM00382 ATPases associated with a variety of cellular activities AL504_15930 SM00382 ATPases associated with a variety of cellular activities AL504_15950 SM00347 helix_turn_helix multiple antibiotic resistance protein AL504_16035 SM00421 helix_turn_helix, Lux Regulon AL504_16090 SM00830 Chorismate mutase type II AL504_16130 SM00382 ATPases associated with a variety of cellular activities AL504_16145 SM00062 Bacterial periplasmic substrate-binding proteins AL504_16150 SM00382 ATPases associated with a variety of cellular activities AL504_16165 SM00342 helix_turn_helix, arabinose operon control protein AL504_16200 SM00478 endonuclease III AL504_16240 SM00530 Helix-turn-helix XRE-family like proteins AL504_16255 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AL504_16260 SM00382 ATPases associated with a variety of cellular activities AL504_16275 SM00829 Enoylreductase AL504_16285 SM00062 Bacterial periplasmic substrate-binding proteins AL504_16290 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL504_16290 SM00895 AL504_16290 AL504_16295 SM01018 B12 binding domain AL504_16350 SM00978 AL504_16350 AL504_16360 SM00448 cheY-homologous receiver domain AL504_16360 SM00862 Transcriptional regulatory protein, C terminal AL504_16365 SM00387 Histidine kinase-like ATPases AL504_16365 SM00388 His Kinase A (phosphoacceptor) domain AL504_16370 SM00448 cheY-homologous receiver domain AL504_16370 SM00862 Transcriptional regulatory protein, C terminal AL504_16375 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL504_16375 SM00387 Histidine kinase-like ATPases AL504_16375 SM00388 His Kinase A (phosphoacceptor) domain AL504_16415 SM00965 Secretin and TonB N terminus short domain AL504_16440 SM00796 Allophanate hydrolase subunit 1 AL504_16445 SM00797 Allophanate hydrolase subunit 2 AL504_16455 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL504_16455 SM00895 AL504_16455 AL504_16485 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL504_16485 SM00866 AL504_16485 AL504_16490 SM00858 AL504_16490 AL504_16525 SM00421 helix_turn_helix, Lux Regulon AL504_16570 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL504_16570 SM00895 AL504_16570 AL504_16580 SM00382 ATPases associated with a variety of cellular activities AL504_16585 SM00382 ATPases associated with a variety of cellular activities AL504_16725 SM00382 ATPases associated with a variety of cellular activities AL504_16730 SM00382 ATPases associated with a variety of cellular activities AL504_16750 SM00342 helix_turn_helix, arabinose operon control protein AL504_16770 SM00342 helix_turn_helix, arabinose operon control protein AL504_16780 SM00487 DEAD-like helicases superfamily AL504_16780 SM00490 helicase superfamily c-terminal domain AL504_16800 SM00382 ATPases associated with a variety of cellular activities AL504_16860 SM00882 Coenzyme A transferase AL504_16865 SM00882 Coenzyme A transferase AL504_16885 SM01012 AL504_16885 AL504_16895 SM00327 von Willebrand factor (vWF) type A domain AL504_16910 SM00382 ATPases associated with a variety of cellular activities AL504_16915 SM00382 ATPases associated with a variety of cellular activities AL504_16955 SM00342 helix_turn_helix, arabinose operon control protein AL504_16965 SM00905 Dihydroneopterin aldolase AL504_16990 SM00925 MltA specific insert domain AL504_17030 SM00382 ATPases associated with a variety of cellular activities AL504_17070 SM00460 Transglutaminase/protease-like homologues AL504_17120 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AL504_17170 SM00382 ATPases associated with a variety of cellular activities AL504_17185 SM00382 ATPases associated with a variety of cellular activities AL504_17205 SM00062 Bacterial periplasmic substrate-binding proteins AL504_17255 SM00382 ATPases associated with a variety of cellular activities AL504_17290 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL504_17290 SM00895 AL504_17290 AL504_17310 SM01236 AL504_17310 AL504_17345 SM00972 Spore Coat Protein U domain AL504_17360 SM00972 Spore Coat Protein U domain AL504_17370 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL504_17370 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL504_17400 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL504_17400 SM00866 AL504_17400 AL504_17410 SM00829 Enoylreductase AL504_17430 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL504_17430 SM00387 Histidine kinase-like ATPases AL504_17430 SM00388 His Kinase A (phosphoacceptor) domain AL504_17435 SM00448 cheY-homologous receiver domain AL504_17435 SM00862 Transcriptional regulatory protein, C terminal AL504_17495 SM00052 Putative diguanylate phosphodiesterase AL504_17495 SM00091 PAS domain AL504_17495 SM00267 diguanylate cyclase AL504_17540 SM00382 ATPases associated with a variety of cellular activities AL504_17565 SM00342 helix_turn_helix, arabinose operon control protein AL504_17580 SM00903 Flavin reductase like domain AL504_17605 SM00965 Secretin and TonB N terminus short domain AL504_17615 SM00344 helix_turn_helix ASNC type AL504_17635 SM00984 UDP binding domain AL504_17720 SM00100 Cyclic nucleotide-monophosphate binding domain AL504_17775 SM00797 Allophanate hydrolase subunit 2 AL504_17780 SM00796 Allophanate hydrolase subunit 1 AL504_17785 SM00878 Biotin carboxylase C-terminal domain AL504_17830 SM00382 ATPases associated with a variety of cellular activities AL504_17855 SM00382 ATPases associated with a variety of cellular activities AL504_17940 SM00530 Helix-turn-helix XRE-family like proteins AL504_17945 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AL504_18025 SM00470 ParB-like nuclease domain AL504_18050 SM00530 Helix-turn-helix XRE-family like proteins AL504_18135 SM00342 helix_turn_helix, arabinose operon control protein AL504_18140 SM00849 Metallo-beta-lactamase superfamily AL504_18160 SM00893 Electron transfer flavoprotein domain AL504_18165 SM00893 Electron transfer flavoprotein domain AL504_18205 SM00382 ATPases associated with a variety of cellular activities AL504_18285 SM00342 helix_turn_helix, arabinose operon control protein AL504_18315 SM00382 ATPases associated with a variety of cellular activities AL504_18335 SM00487 DEAD-like helicases superfamily AL504_18335 SM00490 helicase superfamily c-terminal domain AL504_18395 SM00917 LeuA allosteric (dimerisation) domain AL504_18405 SM00354 helix_turn _helix lactose operon repressor AL504_18415 SM00382 ATPases associated with a variety of cellular activities AL504_18465 SM00836 DALR anticodon binding domain AL504_18465 SM01016 Arginyl tRNA synthetase N terminal dom AL504_18505 SM00849 Metallo-beta-lactamase superfamily AL504_18510 SM00422 helix_turn_helix, mercury resistance AL504_18555 SM00878 Biotin carboxylase C-terminal domain AL504_18555 SM01209 AL504_18555 AL504_18560 SM00342 helix_turn_helix, arabinose operon control protein AL504_18575 SM00346 helix_turn_helix isocitrate lyase regulation AL504_18595 SM00881 CoA binding domain AL504_18600 SM00822 AL504_18600 AL504_18630 SM00965 Secretin and TonB N terminus short domain AL504_18640 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL504_18665 SM00966 SpoVT / AbrB like domain AL504_18675 SM00912 haemagglutination activity domain AL504_18705 SM00342 helix_turn_helix, arabinose operon control protein AL504_18735 SM00965 Secretin and TonB N terminus short domain AL504_18765 SM00062 Bacterial periplasmic substrate-binding proteins AL504_18780 SM00382 ATPases associated with a variety of cellular activities AL504_18790 SM01119 AL504_18790 AL504_18820 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AL504_18820 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AL504_18820 SM00493 AL504_18820 AL504_18830 SM00382 ATPases associated with a variety of cellular activities AL504_18840 SM00822 AL504_18840 AL504_18850 SM00344 helix_turn_helix ASNC type AL504_18860 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain AL504_18885 SM00903 Flavin reductase like domain AL504_18905 SM00450 Rhodanese Homology Domain AL504_18915 SM00382 ATPases associated with a variety of cellular activities AL504_18985 SM00382 ATPases associated with a variety of cellular activities AL504_18995 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL504_18995 SM00866 AL504_18995 AL504_19020 SM00342 helix_turn_helix, arabinose operon control protein AL504_19020 SM00871 Bacterial transcription activator, effector binding domain AL504_19060 SM00382 ATPases associated with a variety of cellular activities AL504_19065 SM00346 helix_turn_helix isocitrate lyase regulation AL504_19100 SM00382 ATPases associated with a variety of cellular activities AL504_19115 SM00062 Bacterial periplasmic substrate-binding proteins AL504_19160 SM00387 Histidine kinase-like ATPases AL504_19160 SM00433 TopoisomeraseII AL504_19165 SM00480 DNA polymerase III beta subunit AL504_19170 SM00382 ATPases associated with a variety of cellular activities AL504_19170 SM00760 Bacterial dnaA protein helix-turn-helix domain AL504_19190 SM01060 AL504_19190 AL504_19210 SM00965 Secretin and TonB N terminus short domain AL504_19225 SM00382 ATPases associated with a variety of cellular activities AL504_19230 SM00382 ATPases associated with a variety of cellular activities AL504_19265 SM00448 cheY-homologous receiver domain AL504_19265 SM00862 Transcriptional regulatory protein, C terminal AL504_19270 SM00387 Histidine kinase-like ATPases AL504_19270 SM00388 His Kinase A (phosphoacceptor) domain AL504_19300 SM00357 Cold shock protein domain AL504_19305 SM01228 AL504_19305 AL504_19325 SM00470 ParB-like nuclease domain AL504_19330 SM00870 AL504_19330 AL504_19350 SM00450 Rhodanese Homology Domain AL504_19360 SM00420 helix_turn_helix, Deoxyribose operon repressor AL504_19360 SM01134 AL504_19360 AL504_19370 SM00382 ATPases associated with a variety of cellular activities AL504_19385 SM01230 AL504_19385 AL504_19430 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AL504_19430 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AL504_19435 SM00649 Ribosomal protein L11/L12 AL504_19460 SM00663 RNA polymerase I subunit A N-terminus AL504_19475 SM00387 Histidine kinase-like ATPases AL504_19475 SM00388 His Kinase A (phosphoacceptor) domain AL504_19475 SM01080 AL504_19475 AL504_19480 SM00257 Lysin motif AL504_19485 SM00448 cheY-homologous receiver domain AL504_19485 SM00862 Transcriptional regulatory protein, C terminal AL504_19490 SM00862 Transcriptional regulatory protein, C terminal AL504_19505 SM00838 Elongation factor G C-terminus AL504_19505 SM00889 Elongation factor G, domain IV AL504_19515 SM01403 AL504_19515 AL504_19535 SM01382 AL504_19535 AL504_19535 SM01383 AL504_19535 AL504_19550 SM00322 K homology RNA-binding domain AL504_19690 SM00028 Tetratricopeptide repeats AL504_19730 SM00382 ATPases associated with a variety of cellular activities AL504_19735 SM00382 ATPases associated with a variety of cellular activities AL504_19750 SM00342 helix_turn_helix, arabinose operon control protein AL504_19770 SM01374 AL504_19770 AL504_19840 SM00363 S4 RNA-binding domain AL504_19840 SM01390 AL504_19840 AL504_19845 SM00662 RNA polymerases D AL504_19875 SM01004 Delta-aminolevulinic acid dehydratase AL504_19905 SM01219 AL504_19905 AL504_19925 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AL504_19985 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL504_19985 SM00895 AL504_19985 AL504_20015 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AL504_20020 SM01130 AL504_20020 AL504_20050 SM00834 Putative regulatory protein AL504_20070 SM00155 Phospholipase D. Active site motifs. AL504_20145 SM00382 ATPases associated with a variety of cellular activities AL504_20175 SM00858 AL504_20175 AL504_20285 SM00382 ATPases associated with a variety of cellular activities AL504_20305 SM00936 Penicillin-binding protein 5, C-terminal domain AL504_20325 SM00671 Sel1-like repeats. AL504_20335 SM00729 Elongator protein 3, MiaB family, Radical SAM AL504_20350 SM00382 ATPases associated with a variety of cellular activities AL504_20350 SM01086 C-terminal, D2-small domain, of ClpB protein AL504_20365 SM00833 Cobalamin synthesis protein cobW C-terminal domain AL504_20375 SM00382 ATPases associated with a variety of cellular activities AL504_20440 SM00344 helix_turn_helix ASNC type AL504_20480 SM00996 S-adenosyl-L-homocysteine hydrolase AL504_20480 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AL504_20505 SM00460 Transglutaminase/protease-like homologues AL504_20540 SM00487 DEAD-like helicases superfamily AL504_20540 SM00490 helicase superfamily c-terminal domain AL504_20545 SM00986 Uracil DNA glycosylase superfamily AL504_20545 SM00987 UreE urease accessory protein, C-terminal domain AL504_20555 SM00912 haemagglutination activity domain AL504_20585 SM00646 AL504_20585 AL504_20625 SM00849 Metallo-beta-lactamase superfamily AL504_20630 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AL504_20655 SM00382 ATPases associated with a variety of cellular activities AL504_20675 SM00382 ATPases associated with a variety of cellular activities AL504_20685 SM00100 Cyclic nucleotide-monophosphate binding domain AL504_20690 SM00347 helix_turn_helix multiple antibiotic resistance protein AL504_20705 SM00382 ATPases associated with a variety of cellular activities AL504_20710 SM00382 ATPases associated with a variety of cellular activities AL504_20750 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AL504_20770 SM00845 GatB domain AL504_20850 SM00749 bacterial OsmY and nodulation domain AL504_20895 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL504_20915 SM00382 ATPases associated with a variety of cellular activities AL504_20935 SM00116 Domain in cystathionine beta-synthase and other proteins. AL504_20960 SM00382 ATPases associated with a variety of cellular activities AL504_20965 SM00382 ATPases associated with a variety of cellular activities AL504_21025 SM00062 Bacterial periplasmic substrate-binding proteins AL504_21055 SM01118 AL504_21055 AL504_21090 SM00729 Elongator protein 3, MiaB family, Radical SAM AL504_21110 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL504_21110 SM00387 Histidine kinase-like ATPases AL504_21110 SM00388 His Kinase A (phosphoacceptor) domain AL504_21115 SM00448 cheY-homologous receiver domain AL504_21170 SM00450 Rhodanese Homology Domain AL504_21175 SM00855 Phosphoglycerate mutase family AL504_21185 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AL504_21185 SM00245 tail specific protease AL504_21195 SM00267 diguanylate cyclase AL504_21200 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL504_21200 SM00895 AL504_21200 AL504_21220 SM00530 Helix-turn-helix XRE-family like proteins AL504_21225 SM00862 Transcriptional regulatory protein, C terminal AL504_21230 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AL504_21295 SM00829 Enoylreductase AL504_21310 SM00422 helix_turn_helix, mercury resistance AL504_21320 SM00530 Helix-turn-helix XRE-family like proteins AL504_21340 SM01007 Class II Aldolase and Adducin N-terminal domain AL504_21365 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL504_21365 SM00895 AL504_21365 AL504_21410 SM00344 helix_turn_helix ASNC type AL504_21430 SM00937 AL504_21430 AL504_21485 SM00346 helix_turn_helix isocitrate lyase regulation AL504_21540 SM00822 AL504_21540 AL504_21545 SM00822 AL504_21545 AL504_21550 SM00382 ATPases associated with a variety of cellular activities AL504_21555 SM00382 ATPases associated with a variety of cellular activities AL504_21580 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL504_21580 SM00895 AL504_21580 AL504_21585 SM00947 Carbonic anhydrase AL504_21620 SM00882 Coenzyme A transferase AL504_21625 SM00882 Coenzyme A transferase AL504_21630 SM00346 helix_turn_helix isocitrate lyase regulation AL504_21660 SM00052 Putative diguanylate phosphodiesterase AL504_21660 SM00862 Transcriptional regulatory protein, C terminal AL504_21690 SM00342 helix_turn_helix, arabinose operon control protein AL504_21720 SM00861 Transketolase, pyrimidine binding domain AL504_21725 SM00822 AL504_21725 AL504_21730 SM00382 ATPases associated with a variety of cellular activities AL504_21735 SM00382 ATPases associated with a variety of cellular activities AL504_21760 SM00822 AL504_21760 AL504_21765 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL504_21765 SM00895 AL504_21765 AL504_21770 SM00858 AL504_21770 AL504_21820 SM00530 Helix-turn-helix XRE-family like proteins AL504_21870 SM00421 helix_turn_helix, Lux Regulon AL504_21870 SM00448 cheY-homologous receiver domain AL504_21875 SM00387 Histidine kinase-like ATPases AL504_21875 SM00388 His Kinase A (phosphoacceptor) domain AL504_21905 SM00530 Helix-turn-helix XRE-family like proteins AL504_22020 SM00382 ATPases associated with a variety of cellular activities AL504_22035 SM00062 Bacterial periplasmic substrate-binding proteins AL504_22070 SM00387 Histidine kinase-like ATPases AL504_22105 SM00382 ATPases associated with a variety of cellular activities AL504_22115 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AL504_22130 SM00346 helix_turn_helix isocitrate lyase regulation AL504_22145 SM00530 Helix-turn-helix XRE-family like proteins AL504_22165 SM00382 ATPases associated with a variety of cellular activities AL504_22210 SM00644 AL504_22210 AL504_22225 SM00382 ATPases associated with a variety of cellular activities AL504_22225 SM00962 SRP54-type protein, GTPase domain AL504_22225 SM00963 SRP54-type protein, helical bundle domain AL504_22230 SM00257 Lysin motif AL504_22310 SM00100 Cyclic nucleotide-monophosphate binding domain AL504_22310 SM00419 helix_turn_helix, cAMP Regulatory protein AL504_22350 SM00849 Metallo-beta-lactamase superfamily AL504_22370 SM00421 helix_turn_helix, Lux Regulon AL504_22375 SM00860 SMI1 / KNR4 family AL504_22380 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL504_22380 SM00387 Histidine kinase-like ATPases AL504_22380 SM00388 His Kinase A (phosphoacceptor) domain AL504_22395 SM00421 helix_turn_helix, Lux Regulon AL504_22395 SM00448 cheY-homologous receiver domain AL504_22420 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL504_22420 SM00895 AL504_22420 AL504_22500 SM00849 Metallo-beta-lactamase superfamily AL504_22555 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL504_22595 SM00822 AL504_22595 AL504_22610 SM00382 ATPases associated with a variety of cellular activities AL504_22635 SM00965 Secretin and TonB N terminus short domain AL504_22650 SM00052 Putative diguanylate phosphodiesterase AL504_22665 SM00530 Helix-turn-helix XRE-family like proteins AL504_22680 SM00862 Transcriptional regulatory protein, C terminal AL504_22685 SM00530 Helix-turn-helix XRE-family like proteins AL504_22705 SM00450 Rhodanese Homology Domain AL504_22745 SM00267 diguanylate cyclase AL504_22810 SM00382 ATPases associated with a variety of cellular activities AL504_22845 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL504_22855 SM00052 Putative diguanylate phosphodiesterase AL504_22855 SM00267 diguanylate cyclase AL504_22880 SM00984 UDP binding domain AL504_22945 SM00448 cheY-homologous receiver domain AL504_22945 SM00862 Transcriptional regulatory protein, C terminal AL504_22950 SM00387 Histidine kinase-like ATPases AL504_22950 SM00388 His Kinase A (phosphoacceptor) domain AL504_22980 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL504_22980 SM00895 AL504_22980 AL504_22990 SM00563 Phosphate acyltransferases AL504_23020 SM00849 Metallo-beta-lactamase superfamily AL504_23025 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AL504_23025 SM01232 AL504_23025 AL504_23030 SM00028 Tetratricopeptide repeats AL504_23040 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL504_23040 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL504_23055 SM01400 AL504_23055 AL504_23090 SM00382 ATPases associated with a variety of cellular activities AL504_23100 SM00347 helix_turn_helix multiple antibiotic resistance protein AL504_23140 SM00382 ATPases associated with a variety of cellular activities AL504_23140 SM00962 SRP54-type protein, GTPase domain AL504_23140 SM00963 SRP54-type protein, helical bundle domain AL504_23145 SM00880 AL504_23145 AL504_23145 SM01118 AL504_23145 AL504_23170 SM00382 ATPases associated with a variety of cellular activities AL504_23180 SM00346 helix_turn_helix isocitrate lyase regulation AL504_23220 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AL504_23240 SM00382 ATPases associated with a variety of cellular activities AL504_23245 SM00382 ATPases associated with a variety of cellular activities AL504_23305 SM00347 helix_turn_helix multiple antibiotic resistance protein AL504_23320 SM00883 Chaperonin 10 Kd subunit AL504_23355 SM01130 AL504_23355 AL504_23395 SM00822 AL504_23395 AL504_23400 SM00342 helix_turn_helix, arabinose operon control protein AL504_23435 SM00387 Histidine kinase-like ATPases AL504_23435 SM00388 His Kinase A (phosphoacceptor) domain AL504_23440 SM00382 ATPases associated with a variety of cellular activities AL504_23440 SM00448 cheY-homologous receiver domain AL504_23460 SM00052 Putative diguanylate phosphodiesterase AL504_23460 SM01034 Sensors of blue-light using FAD AL504_23465 SM00822 AL504_23465 AL504_23480 SM00382 ATPases associated with a variety of cellular activities AL504_23485 SM00382 ATPases associated with a variety of cellular activities AL504_23500 SM00382 ATPases associated with a variety of cellular activities AL504_23590 SM00342 helix_turn_helix, arabinose operon control protein AL504_23595 SM00387 Histidine kinase-like ATPases AL504_23595 SM00388 His Kinase A (phosphoacceptor) domain AL504_23595 SM00448 cheY-homologous receiver domain AL504_23605 SM00138 Methyltransferase, chemotaxis proteins AL504_23610 SM00387 Histidine kinase-like ATPases AL504_23610 SM00388 His Kinase A (phosphoacceptor) domain AL504_23610 SM00448 cheY-homologous receiver domain AL504_23615 SM00448 cheY-homologous receiver domain AL504_23620 SM00248 ankyrin repeats AL504_23640 SM00450 Rhodanese Homology Domain AL504_23655 SM00998 Adenylosuccinate lyase C-terminus AL504_23665 SM00346 helix_turn_helix isocitrate lyase regulation AL504_23675 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AL504_23675 SM00245 tail specific protease AL504_23745 SM00965 Secretin and TonB N terminus short domain AL504_23830 SM00822 AL504_23830 AL504_23850 SM00829 Enoylreductase AL504_23900 SM00226 Low molecular weight phosphatase family AL504_23905 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AL504_23975 SM00965 Secretin and TonB N terminus short domain AL504_23985 SM00382 ATPases associated with a variety of cellular activities AL504_24000 SM00487 DEAD-like helicases superfamily AL504_24000 SM00490 helicase superfamily c-terminal domain AL504_24010 SM00382 ATPases associated with a variety of cellular activities AL504_24015 SM00382 ATPases associated with a variety of cellular activities AL504_24030 SM00342 helix_turn_helix, arabinose operon control protein AL504_24060 SM00965 Secretin and TonB N terminus short domain AL504_24090 SM00347 helix_turn_helix multiple antibiotic resistance protein AL504_24115 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL504_24120 SM01007 Class II Aldolase and Adducin N-terminal domain AL504_24145 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AL504_24145 SM00450 Rhodanese Homology Domain AL504_24170 SM01130 AL504_24170 AL504_24185 SM00342 helix_turn_helix, arabinose operon control protein AL504_24205 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AL504_24210 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AL504_24210 SM00267 diguanylate cyclase AL504_24215 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL504_24215 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL504_24235 SM00342 helix_turn_helix, arabinose operon control protein AL504_24240 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AL504_24290 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AL504_24305 SM01012 AL504_24305 AL504_24315 SM00347 helix_turn_helix multiple antibiotic resistance protein AL504_24330 SM00421 helix_turn_helix, Lux Regulon AL504_24330 SM00448 cheY-homologous receiver domain AL504_24365 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AL504_24365 SM00450 Rhodanese Homology Domain AL504_24375 SM00342 helix_turn_helix, arabinose operon control protein AL504_24425 SM00062 Bacterial periplasmic substrate-binding proteins AL504_24490 SM00342 helix_turn_helix, arabinose operon control protein AL504_24520 SM00244 prohibitin homologues AL504_24525 SM00052 Putative diguanylate phosphodiesterase AL504_24545 SM00965 Secretin and TonB N terminus short domain AL504_24550 SM00822 AL504_24550 AL504_24570 SM00965 Secretin and TonB N terminus short domain AL504_24585 SM00965 Secretin and TonB N terminus short domain AL504_24590 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL504_24590 SM00895 AL504_24590 AL504_24605 SM00478 endonuclease III AL504_24630 SM00342 helix_turn_helix, arabinose operon control protein AL504_24645 SM00342 helix_turn_helix, arabinose operon control protein AL504_24665 SM00155 Phospholipase D. Active site motifs. AL504_24670 SM00530 Helix-turn-helix XRE-family like proteins AL504_24695 SM00822 AL504_24695 AL504_24720 SM00347 helix_turn_helix multiple antibiotic resistance protein AL504_24730 SM00342 helix_turn_helix, arabinose operon control protein AL504_24740 SM00919 Malic enzyme, NAD binding domain AL504_24740 SM01274 AL504_24740 AL504_24770 SM00248 ankyrin repeats AL504_24795 SM00448 cheY-homologous receiver domain AL504_24800 SM00387 Histidine kinase-like ATPases AL504_24835 SM00257 Lysin motif AL504_24840 SM00382 ATPases associated with a variety of cellular activities AL504_24850 SM00062 Bacterial periplasmic substrate-binding proteins AL504_24865 SM00344 helix_turn_helix ASNC type AL504_24945 SM00965 Secretin and TonB N terminus short domain AL504_24965 SM00382 ATPases associated with a variety of cellular activities AL504_24975 SM00342 helix_turn_helix, arabinose operon control protein AL504_24975 SM00478 endonuclease III AL504_24975 SM01009 AlkA N-terminal domain AL504_24985 SM00014 Acid phosphatase homologues AL504_24995 SM00387 Histidine kinase-like ATPases AL504_25000 SM00421 helix_turn_helix, Lux Regulon AL504_25000 SM00448 cheY-homologous receiver domain AL504_25025 SM00382 ATPases associated with a variety of cellular activities AL504_25040 SM00567 E-Z type HEAT repeats AL504_25055 SM00796 Allophanate hydrolase subunit 1 AL504_25055 SM00797 Allophanate hydrolase subunit 2 AL504_25055 SM00878 Biotin carboxylase C-terminal domain AL504_25140 SM00448 cheY-homologous receiver domain AL504_25140 SM00862 Transcriptional regulatory protein, C terminal AL504_25145 SM00387 Histidine kinase-like ATPases AL504_25205 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AL504_25205 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AL504_25210 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AL504_25225 SM00729 Elongator protein 3, MiaB family, Radical SAM AL504_25235 SM00852 Probable molybdopterin binding domain AL504_25240 SM00852 Probable molybdopterin binding domain AL504_25290 SM00729 Elongator protein 3, MiaB family, Radical SAM AL504_25290 SM00876 Biotin and Thiamin Synthesis associated domain AL504_25295 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AL504_25295 SM00091 PAS domain AL504_25295 SM00421 helix_turn_helix, Lux Regulon AL504_25340 SM01091 Transporter associated domain AL504_25355 SM00729 Elongator protein 3, MiaB family, Radical SAM AL504_25360 SM00014 Acid phosphatase homologues AL504_25365 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AL504_25375 SM00530 Helix-turn-helix XRE-family like proteins AL504_25395 SM01323 AL504_25395 AL504_25420 SM00346 helix_turn_helix isocitrate lyase regulation AL504_25430 SM00903 Flavin reductase like domain AL504_25465 SM00382 ATPases associated with a variety of cellular activities AL504_25515 SM00919 Malic enzyme, NAD binding domain AL504_25515 SM01274 AL504_25515 AL504_25540 SM00861 Transketolase, pyrimidine binding domain AL504_25545 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AL504_25605 SM00271 DnaJ molecular chaperone homology domain AL504_25635 SM00852 Probable molybdopterin binding domain AL504_25655 SM00316 Ribosomal protein S1-like RNA-binding domain AL504_25665 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AL504_25675 SM00382 ATPases associated with a variety of cellular activities AL504_25710 SM00072 Guanylate kinase homologues. AL504_25725 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL504_25725 SM00866 AL504_25725 AL504_25750 SM00382 ATPases associated with a variety of cellular activities AL504_25755 SM00382 ATPases associated with a variety of cellular activities AL504_25805 SM01001 AIR carboxylase AL504_25820 SM00346 helix_turn_helix isocitrate lyase regulation AL504_25825 SM00882 Coenzyme A transferase AL504_25830 SM00882 Coenzyme A transferase AL504_25840 SM00062 Bacterial periplasmic substrate-binding proteins AL504_25845 SM00346 helix_turn_helix isocitrate lyase regulation AL504_25855 SM00062 Bacterial periplasmic substrate-binding proteins AL504_25855 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AL504_25865 SM00382 ATPases associated with a variety of cellular activities AL504_25875 SM00382 ATPases associated with a variety of cellular activities AL504_25880 SM00382 ATPases associated with a variety of cellular activities AL504_25915 SM00530 Helix-turn-helix XRE-family like proteins AL504_25985 SM00829 Enoylreductase AL504_26020 SM00347 helix_turn_helix multiple antibiotic resistance protein AL504_26075 SM00965 Secretin and TonB N terminus short domain AL504_26085 SM00382 ATPases associated with a variety of cellular activities AL504_26095 SM00493 AL504_26095 AL504_26105 SM00062 Bacterial periplasmic substrate-binding proteins AL504_26110 SM00382 ATPases associated with a variety of cellular activities AL504_26130 SM00448 cheY-homologous receiver domain AL504_26135 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AL504_26135 SM00387 Histidine kinase-like ATPases AL504_26135 SM00388 His Kinase A (phosphoacceptor) domain AL504_26150 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AL504_26155 SM00851 MGS-like domain AL504_26155 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AL504_26165 SM00822 AL504_26165 AL504_26170 SM00855 Phosphoglycerate mutase family AL504_26180 SM00382 ATPases associated with a variety of cellular activities AL504_26205 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL504_26205 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL504_26215 SM01103 AL504_26215 AL504_26225 SM00382 ATPases associated with a variety of cellular activities AL504_26270 SM00382 ATPases associated with a variety of cellular activities AL504_26335 SM00342 helix_turn_helix, arabinose operon control protein AL504_26360 SM00028 Tetratricopeptide repeats AL504_26365 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. AL504_26400 SM00116 Domain in cystathionine beta-synthase and other proteins. AL504_26425 SM00382 ATPases associated with a variety of cellular activities AL504_26435 SM00342 helix_turn_helix, arabinose operon control protein AL504_26445 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AL504_26445 SM00091 PAS domain AL504_26445 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL504_26455 SM00479 AL504_26455 AL504_26540 SM01007 Class II Aldolase and Adducin N-terminal domain AL504_26630 SM00347 helix_turn_helix multiple antibiotic resistance protein AL504_26635 SM00411 bacterial (prokaryotic) histone like domain AL504_26640 SM00936 Penicillin-binding protein 5, C-terminal domain AL504_26660 SM00382 ATPases associated with a variety of cellular activities AL504_26705 SM00382 ATPases associated with a variety of cellular activities AL504_26715 SM00354 helix_turn _helix lactose operon repressor AL504_26735 SM00382 ATPases associated with a variety of cellular activities AL504_26760 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL504_26760 SM00895 AL504_26760 AL504_26800 SM00382 ATPases associated with a variety of cellular activities AL504_26855 SM00382 ATPases associated with a variety of cellular activities AL504_26875 SM00862 Transcriptional regulatory protein, C terminal AL504_26910 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AL504_26910 SM00465 GIY-YIG type nucleases (URI domain) AL504_26925 SM01329 AL504_26925 AL504_26950 SM00342 helix_turn_helix, arabinose operon control protein AL504_27035 SM00382 ATPases associated with a variety of cellular activities AL504_27040 SM00062 Bacterial periplasmic substrate-binding proteins AL504_27060 SM00530 Helix-turn-helix XRE-family like proteins AL504_27140 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL504_27155 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AL504_27165 SM00382 ATPases associated with a variety of cellular activities AL504_27170 SM00382 ATPases associated with a variety of cellular activities AL504_27200 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL504_27200 SM00387 Histidine kinase-like ATPases AL504_27200 SM00388 His Kinase A (phosphoacceptor) domain AL504_27205 SM00448 cheY-homologous receiver domain AL504_27205 SM00862 Transcriptional regulatory protein, C terminal AL504_27225 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AL504_27240 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL504_27240 SM00895 AL504_27240 AL504_27250 SM00530 Helix-turn-helix XRE-family like proteins AL504_27265 SM00965 Secretin and TonB N terminus short domain AL504_27285 SM00342 helix_turn_helix, arabinose operon control protein AL504_27295 SM00155 Phospholipase D. Active site motifs. AL504_27305 SM00342 helix_turn_helix, arabinose operon control protein AL504_27340 SM00344 helix_turn_helix ASNC type AL504_27355 SM00530 Helix-turn-helix XRE-family like proteins AL504_27370 SM00448 cheY-homologous receiver domain AL504_27385 SM00965 Secretin and TonB N terminus short domain AL504_27400 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL504_27400 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL504_27425 SM00448 cheY-homologous receiver domain AL504_27425 SM00862 Transcriptional regulatory protein, C terminal AL504_27430 SM00387 Histidine kinase-like ATPases AL504_27430 SM00388 His Kinase A (phosphoacceptor) domain AL504_27435 SM00470 ParB-like nuclease domain AL504_27480 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AL504_27520 SM01130 AL504_27520 AL504_27535 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. AL504_27540 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AL504_27540 SM00534 ATPase domain of DNA mismatch repair MUTS family AL504_27560 SM00965 Secretin and TonB N terminus short domain AL504_27625 SM00829 Enoylreductase AL504_27665 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL504_27665 SM00895 AL504_27665 AL504_27680 SM00382 ATPases associated with a variety of cellular activities AL504_27755 SM00346 helix_turn_helix isocitrate lyase regulation AL504_27795 SM00382 ATPases associated with a variety of cellular activities AL504_27800 SM00710 Parallel beta-helix repeats AL504_27800 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses AL504_27810 SM00900 AL504_27810 AL504_27835 SM01091 Transporter associated domain AL504_27855 SM00028 Tetratricopeptide repeats AL504_27860 SM00840 AL504_27860 AL504_27865 SM00478 endonuclease III AL504_27940 SM00387 Histidine kinase-like ATPases AL504_27940 SM00388 His Kinase A (phosphoacceptor) domain AL504_27940 SM00448 cheY-homologous receiver domain AL504_27945 SM00052 Putative diguanylate phosphodiesterase AL504_27945 SM00448 cheY-homologous receiver domain AL504_27950 SM00073 Histidine Phosphotransfer domain AL504_27950 SM00387 Histidine kinase-like ATPases AL504_27950 SM00388 His Kinase A (phosphoacceptor) domain AL504_27950 SM00448 cheY-homologous receiver domain AL504_27955 SM00450 Rhodanese Homology Domain AL504_28020 SM00530 Helix-turn-helix XRE-family like proteins AL504_28045 SM00346 helix_turn_helix isocitrate lyase regulation AL504_28060 SM00882 Coenzyme A transferase AL504_28065 SM00882 Coenzyme A transferase AL504_28070 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL504_28070 SM00866 AL504_28070 AL504_28090 SM00382 ATPases associated with a variety of cellular activities AL504_28095 SM00347 helix_turn_helix multiple antibiotic resistance protein AL504_28165 SM00421 helix_turn_helix, Lux Regulon AL504_28170 SM00421 helix_turn_helix, Lux Regulon AL504_28290 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL504_28310 SM00318 Staphylococcal nuclease homologues AL504_28330 SM00382 ATPases associated with a variety of cellular activities AL504_28340 SM00347 helix_turn_helix multiple antibiotic resistance protein AL504_28380 SM00858 AL504_28380 AL504_28410 SM00028 Tetratricopeptide repeats AL504_28425 SM00382 ATPases associated with a variety of cellular activities AL504_28440 SM00841 Elongation factor P, C-terminal AL504_28440 SM01185 AL504_28440 AL504_28520 SM00829 Enoylreductase AL504_28525 SM00382 ATPases associated with a variety of cellular activities AL504_28530 SM00382 ATPases associated with a variety of cellular activities AL504_28565 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL504_28565 SM00895 AL504_28565 AL504_28575 SM00861 Transketolase, pyrimidine binding domain AL504_28590 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AL504_28595 SM00062 Bacterial periplasmic substrate-binding proteins AL504_28600 SM00382 ATPases associated with a variety of cellular activities AL504_28620 SM00858 AL504_28620 AL504_28635 SM00346 helix_turn_helix isocitrate lyase regulation AL504_28640 SM00342 helix_turn_helix, arabinose operon control protein AL504_28640 SM00871 Bacterial transcription activator, effector binding domain AL504_28665 SM00421 helix_turn_helix, Lux Regulon AL504_28675 SM00100 Cyclic nucleotide-monophosphate binding domain AL504_28675 SM00419 helix_turn_helix, cAMP Regulatory protein AL504_28690 SM00382 ATPases associated with a variety of cellular activities AL504_28740 SM00421 helix_turn_helix, Lux Regulon AL504_28740 SM00448 cheY-homologous receiver domain AL504_28745 SM00052 Putative diguanylate phosphodiesterase AL504_28750 SM00421 helix_turn_helix, Lux Regulon AL504_28750 SM00448 cheY-homologous receiver domain AL504_28755 SM00062 Bacterial periplasmic substrate-binding proteins AL504_28755 SM00387 Histidine kinase-like ATPases AL504_28755 SM00388 His Kinase A (phosphoacceptor) domain AL504_28755 SM00448 cheY-homologous receiver domain AL504_28765 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL504_28790 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen AL504_28805 SM00642 Alpha-amylase domain AL504_28815 SM00642 Alpha-amylase domain AL504_28820 SM00642 Alpha-amylase domain AL504_28825 SM00642 Alpha-amylase domain AL504_28830 SM00642 Alpha-amylase domain AL504_28835 SM00642 Alpha-amylase domain AL504_28850 SM00155 Phospholipase D. Active site motifs. AL504_28905 SM00829 Enoylreductase AL504_28965 SM00829 Enoylreductase AL504_29000 SM00354 helix_turn _helix lactose operon repressor AL504_29005 SM00354 helix_turn _helix lactose operon repressor AL504_29030 SM01060 AL504_29030 AL504_29065 SM01007 Class II Aldolase and Adducin N-terminal domain AL504_29070 SM00530 Helix-turn-helix XRE-family like proteins AL504_29085 SM00965 Secretin and TonB N terminus short domain AL504_29105 SM00912 haemagglutination activity domain AL504_29125 SM00560 LamG-like jellyroll fold domain AL504_29175 SM01116 AL504_29175 AL504_29180 SM00382 ATPases associated with a variety of cellular activities AL504_29195 SM00421 helix_turn_helix, Lux Regulon AL504_29195 SM00448 cheY-homologous receiver domain AL504_29200 SM00091 PAS domain AL504_29200 SM00387 Histidine kinase-like ATPases AL504_29205 SM00382 ATPases associated with a variety of cellular activities AL504_29235 SM00091 PAS domain AL504_29235 SM00421 helix_turn_helix, Lux Regulon AL504_29270 SM00822 AL504_29270 AL504_29270 SM00823 Phosphopantetheine attachment site AL504_29270 SM00825 Beta-ketoacyl synthase AL504_29270 SM00826 AL504_29270 AL504_29270 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AL504_29270 SM00829 Enoylreductase AL504_29270 SM01294 AL504_29270 AL504_29305 SM00342 helix_turn_helix, arabinose operon control protein AL504_29345 SM00342 helix_turn_helix, arabinose operon control protein AL504_29375 SM00382 ATPases associated with a variety of cellular activities AL504_29420 SM00382 ATPases associated with a variety of cellular activities AL504_29480 SM00346 helix_turn_helix isocitrate lyase regulation AL504_29530 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL504_29580 SM00342 helix_turn_helix, arabinose operon control protein AL504_29600 SM00382 ATPases associated with a variety of cellular activities AL504_29600 SM00930 AL504_29600 AL504_29630 SM00363 S4 RNA-binding domain AL504_29635 SM00052 Putative diguanylate phosphodiesterase AL504_29635 SM00267 diguanylate cyclase AL504_29655 SM00382 ATPases associated with a variety of cellular activities AL504_29765 SM00382 ATPases associated with a variety of cellular activities AL504_29775 SM00344 helix_turn_helix ASNC type AL504_29790 SM00267 diguanylate cyclase AL504_29800 SM00834 Putative regulatory protein AL504_29805 SM00062 Bacterial periplasmic substrate-binding proteins AL504_29855 SM00342 helix_turn_helix, arabinose operon control protein AL504_29860 SM00342 helix_turn_helix, arabinose operon control protein AL504_29895 SM00829 Enoylreductase AL504_29925 SM00100 Cyclic nucleotide-monophosphate binding domain AL504_29925 SM00419 helix_turn_helix, cAMP Regulatory protein AL504_29935 SM00382 ATPases associated with a variety of cellular activities AL504_29935 SM01086 C-terminal, D2-small domain, of ClpB protein AL504_30015 SM01005 Alanine racemase, C-terminal domain AL504_30020 SM00822 AL504_30020 AL504_30055 SM00347 helix_turn_helix multiple antibiotic resistance protein AL504_30065 SM00382 ATPases associated with a variety of cellular activities AL504_30095 SM01130 AL504_30095 AL504_30100 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL504_30100 SM00895 AL504_30100 AL504_30145 SM00822 AL504_30145 AL504_30190 SM00248 ankyrin repeats AL504_30200 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL504_30200 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL504_30220 SM00357 Cold shock protein domain AL504_30230 SM01359 AL504_30230 AL504_30230 SM01360 AL504_30230 AL504_30240 SM00382 ATPases associated with a variety of cellular activities AL504_30240 SM01086 C-terminal, D2-small domain, of ClpB protein AL504_30280 SM00382 ATPases associated with a variety of cellular activities AL504_30285 SM00382 ATPases associated with a variety of cellular activities AL504_30380 SM00062 Bacterial periplasmic substrate-binding proteins AL504_30395 SM00382 ATPases associated with a variety of cellular activities AL504_30425 SM00346 helix_turn_helix isocitrate lyase regulation AL504_30460 SM00904 Riboflavin kinase AL504_30490 SM00830 Chorismate mutase type II AL504_30500 SM00965 Secretin and TonB N terminus short domain AL504_30510 SM00965 Secretin and TonB N terminus short domain AL504_30525 SM00382 ATPases associated with a variety of cellular activities AL504_30655 SM00382 ATPases associated with a variety of cellular activities AL504_30660 SM00990 AL504_30660 AL504_30775 SM00232 JAB/MPN domain AL504_30935 SM01119 AL504_30935 AL504_30965 SM00357 Cold shock protein domain AL504_30975 SM00357 Cold shock protein domain AL504_31000 SM00382 ATPases associated with a variety of cellular activities AL504_31000 SM00994 ClpX C4-type zinc finger AL504_31000 SM01086 C-terminal, D2-small domain, of ClpB protein AL504_31005 SM00382 ATPases associated with a variety of cellular activities AL504_31005 SM00464 Found in ATP-dependent protease La (LON) AL504_31020 SM00487 DEAD-like helicases superfamily AL504_31020 SM00490 helicase superfamily c-terminal domain AL504_31025 SM00226 Low molecular weight phosphatase family AL504_31050 SM00271 DnaJ molecular chaperone homology domain AL504_31085 SM00382 ATPases associated with a variety of cellular activities AL504_31105 SM00382 ATPases associated with a variety of cellular activities AL504_31155 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL504_31185 SM00869 Autotransporter beta-domain AL504_31200 SM00986 Uracil DNA glycosylase superfamily AL504_31200 SM00987 UreE urease accessory protein, C-terminal domain AL504_31250 SM00028 Tetratricopeptide repeats AL504_31280 SM00823 Phosphopantetheine attachment site AL504_31305 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL504_31305 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL504_31310 SM00530 Helix-turn-helix XRE-family like proteins AL504_31400 SM00530 Helix-turn-helix XRE-family like proteins AL504_31405 SM00530 Helix-turn-helix XRE-family like proteins AL504_31665 SM00974 AL504_31665 AL504_31670 SM01234 AL504_31670 AL504_31755 SM00869 Autotransporter beta-domain AL504_31760 SM00869 Autotransporter beta-domain AL504_31820 SM00507 HNH nucleases