AL509_00020 SM00346 helix_turn_helix isocitrate lyase regulation AL509_00120 SM00530 Helix-turn-helix XRE-family like proteins AL509_00145 SM00342 helix_turn_helix, arabinose operon control protein AL509_00200 SM00347 helix_turn_helix multiple antibiotic resistance protein AL509_00230 SM00860 SMI1 / KNR4 family AL509_00345 SM00382 ATPases associated with a variety of cellular activities AL509_00345 SM01086 C-terminal, D2-small domain, of ClpB protein AL509_00540 SM01192 AL509_00540 AL509_00540 SM01193 AL509_00540 AL509_00615 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL509_00615 SM00895 AL509_00615 AL509_00635 SM00347 helix_turn_helix multiple antibiotic resistance protein AL509_00675 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AL509_00685 SM00344 helix_turn_helix ASNC type AL509_00695 SM00382 ATPases associated with a variety of cellular activities AL509_00710 SM00267 diguanylate cyclase AL509_00710 SM00448 cheY-homologous receiver domain AL509_00715 SM00448 cheY-homologous receiver domain AL509_00720 SM00073 Histidine Phosphotransfer domain AL509_00720 SM00260 Two component signalling adaptor domain AL509_00720 SM00387 Histidine kinase-like ATPases AL509_00720 SM00448 cheY-homologous receiver domain AL509_00725 SM00260 Two component signalling adaptor domain AL509_00735 SM00260 Two component signalling adaptor domain AL509_00740 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL509_00740 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL509_00780 SM00491 AL509_00780 AL509_00785 SM00990 AL509_00785 AL509_00810 SM00822 AL509_00810 AL509_00850 SM00342 helix_turn_helix, arabinose operon control protein AL509_00885 SM00422 helix_turn_helix, mercury resistance AL509_00895 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL509_00895 SM00387 Histidine kinase-like ATPases AL509_00895 SM00388 His Kinase A (phosphoacceptor) domain AL509_00915 SM00822 AL509_00915 AL509_00920 SM00342 helix_turn_helix, arabinose operon control protein AL509_00950 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AL509_00955 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AL509_00960 SM00829 Enoylreductase AL509_01005 SM00342 helix_turn_helix, arabinose operon control protein AL509_01050 SM00487 DEAD-like helicases superfamily AL509_01050 SM00490 helicase superfamily c-terminal domain AL509_01075 SM00116 Domain in cystathionine beta-synthase and other proteins. AL509_01075 SM01240 AL509_01075 AL509_01085 SM00869 Autotransporter beta-domain AL509_01190 SM00382 ATPases associated with a variety of cellular activities AL509_01195 SM00382 ATPases associated with a variety of cellular activities AL509_01240 SM00849 Metallo-beta-lactamase superfamily AL509_01245 SM00062 Bacterial periplasmic substrate-binding proteins AL509_01265 SM00729 Elongator protein 3, MiaB family, Radical SAM AL509_01345 SM00267 diguanylate cyclase AL509_01370 SM00477 DNA/RNA non-specific endonuclease AL509_01370 SM00892 DNA/RNA non-specific endonuclease AL509_01455 SM00387 Histidine kinase-like ATPases AL509_01455 SM00388 His Kinase A (phosphoacceptor) domain AL509_01455 SM00448 cheY-homologous receiver domain AL509_01460 SM00342 helix_turn_helix, arabinose operon control protein AL509_01460 SM00448 cheY-homologous receiver domain AL509_01475 SM00912 haemagglutination activity domain AL509_01500 SM01130 AL509_01500 AL509_01545 SM00387 Histidine kinase-like ATPases AL509_01545 SM00388 His Kinase A (phosphoacceptor) domain AL509_01550 SM00448 cheY-homologous receiver domain AL509_01550 SM00862 Transcriptional regulatory protein, C terminal AL509_01565 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL509_01565 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL509_01590 SM01211 AL509_01590 AL509_01645 SM00965 Secretin and TonB N terminus short domain AL509_01655 SM00481 DNA polymerase alpha chain like domain AL509_01705 SM00849 Metallo-beta-lactamase superfamily AL509_01775 SM00883 Chaperonin 10 Kd subunit AL509_01825 SM00327 von Willebrand factor (vWF) type A domain AL509_01830 SM00028 Tetratricopeptide repeats AL509_01830 SM00327 von Willebrand factor (vWF) type A domain AL509_01870 SM00965 Secretin and TonB N terminus short domain AL509_01905 SM00903 Flavin reductase like domain AL509_01915 SM00347 helix_turn_helix multiple antibiotic resistance protein AL509_01945 SM00382 ATPases associated with a variety of cellular activities AL509_01975 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL509_01975 SM00387 Histidine kinase-like ATPases AL509_01975 SM00388 His Kinase A (phosphoacceptor) domain AL509_01985 SM00382 ATPases associated with a variety of cellular activities AL509_02015 SM00822 AL509_02015 AL509_02030 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL509_02060 SM00382 ATPases associated with a variety of cellular activities AL509_02080 SM00382 ATPases associated with a variety of cellular activities AL509_02115 SM00271 DnaJ molecular chaperone homology domain AL509_02140 SM00226 Low molecular weight phosphatase family AL509_02145 SM00487 DEAD-like helicases superfamily AL509_02145 SM00490 helicase superfamily c-terminal domain AL509_02160 SM00382 ATPases associated with a variety of cellular activities AL509_02160 SM00464 Found in ATP-dependent protease La (LON) AL509_02165 SM00382 ATPases associated with a variety of cellular activities AL509_02165 SM00994 ClpX C4-type zinc finger AL509_02165 SM01086 C-terminal, D2-small domain, of ClpB protein AL509_02190 SM00357 Cold shock protein domain AL509_02200 SM00357 Cold shock protein domain AL509_02225 SM01119 AL509_02225 AL509_02355 SM00382 ATPases associated with a variety of cellular activities AL509_02370 SM00965 Secretin and TonB N terminus short domain AL509_02375 SM00965 Secretin and TonB N terminus short domain AL509_02390 SM00830 Chorismate mutase type II AL509_02425 SM00904 Riboflavin kinase AL509_02465 SM00346 helix_turn_helix isocitrate lyase regulation AL509_02495 SM00382 ATPases associated with a variety of cellular activities AL509_02510 SM00062 Bacterial periplasmic substrate-binding proteins AL509_02575 SM00382 ATPases associated with a variety of cellular activities AL509_02580 SM00382 ATPases associated with a variety of cellular activities AL509_02620 SM00382 ATPases associated with a variety of cellular activities AL509_02620 SM01086 C-terminal, D2-small domain, of ClpB protein AL509_02630 SM01359 AL509_02630 AL509_02630 SM01360 AL509_02630 AL509_02655 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL509_02655 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL509_02665 SM00248 ankyrin repeats AL509_02710 SM00822 AL509_02710 AL509_02755 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL509_02755 SM00895 AL509_02755 AL509_02760 SM01130 AL509_02760 AL509_02790 SM00382 ATPases associated with a variety of cellular activities AL509_02800 SM00347 helix_turn_helix multiple antibiotic resistance protein AL509_02835 SM00822 AL509_02835 AL509_02840 SM01005 Alanine racemase, C-terminal domain AL509_02945 SM00382 ATPases associated with a variety of cellular activities AL509_02945 SM01086 C-terminal, D2-small domain, of ClpB protein AL509_02955 SM00100 Cyclic nucleotide-monophosphate binding domain AL509_02955 SM00419 helix_turn_helix, cAMP Regulatory protein AL509_02970 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AL509_03025 SM00342 helix_turn_helix, arabinose operon control protein AL509_03100 SM00342 helix_turn_helix, arabinose operon control protein AL509_03135 SM00342 helix_turn_helix, arabinose operon control protein AL509_03235 SM00091 PAS domain AL509_03235 SM00421 helix_turn_helix, Lux Regulon AL509_03265 SM00382 ATPases associated with a variety of cellular activities AL509_03270 SM00091 PAS domain AL509_03270 SM00387 Histidine kinase-like ATPases AL509_03275 SM00421 helix_turn_helix, Lux Regulon AL509_03275 SM00448 cheY-homologous receiver domain AL509_03290 SM00382 ATPases associated with a variety of cellular activities AL509_03295 SM01116 AL509_03295 AL509_03415 SM00912 haemagglutination activity domain AL509_03445 SM00530 Helix-turn-helix XRE-family like proteins AL509_03450 SM01007 Class II Aldolase and Adducin N-terminal domain AL509_03500 SM00382 ATPases associated with a variety of cellular activities AL509_03500 SM00448 cheY-homologous receiver domain AL509_03505 SM00387 Histidine kinase-like ATPases AL509_03505 SM00388 His Kinase A (phosphoacceptor) domain AL509_03510 SM00869 Autotransporter beta-domain AL509_03535 SM00267 diguanylate cyclase AL509_03540 SM00869 Autotransporter beta-domain AL509_03600 SM01060 AL509_03600 AL509_03640 SM00986 Uracil DNA glycosylase superfamily AL509_03640 SM00987 UreE urease accessory protein, C-terminal domain AL509_03655 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL509_03675 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AL509_03685 SM00829 Enoylreductase AL509_03690 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL509_03715 SM00749 bacterial OsmY and nodulation domain AL509_03780 SM00822 AL509_03780 AL509_03795 SM00382 ATPases associated with a variety of cellular activities AL509_03795 SM00448 cheY-homologous receiver domain AL509_03855 SM00155 Phospholipase D. Active site motifs. AL509_03890 SM00642 Alpha-amylase domain AL509_03895 SM00642 Alpha-amylase domain AL509_03900 SM00642 Alpha-amylase domain AL509_03905 SM00642 Alpha-amylase domain AL509_03930 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen AL509_03960 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL509_03980 SM00965 Secretin and TonB N terminus short domain AL509_04005 SM00382 ATPases associated with a variety of cellular activities AL509_04020 SM00100 Cyclic nucleotide-monophosphate binding domain AL509_04020 SM00419 helix_turn_helix, cAMP Regulatory protein AL509_04030 SM00421 helix_turn_helix, Lux Regulon AL509_04055 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL509_04055 SM00866 AL509_04055 AL509_04080 SM00346 helix_turn_helix isocitrate lyase regulation AL509_04095 SM00858 AL509_04095 AL509_04115 SM00382 ATPases associated with a variety of cellular activities AL509_04120 SM00062 Bacterial periplasmic substrate-binding proteins AL509_04125 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AL509_04140 SM00861 Transketolase, pyrimidine binding domain AL509_04150 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL509_04150 SM00895 AL509_04150 AL509_04185 SM00382 ATPases associated with a variety of cellular activities AL509_04190 SM00382 ATPases associated with a variety of cellular activities AL509_04195 SM00829 Enoylreductase AL509_04295 SM00841 Elongation factor P, C-terminal AL509_04295 SM01185 AL509_04295 AL509_04310 SM00382 ATPases associated with a variety of cellular activities AL509_04325 SM00028 Tetratricopeptide repeats AL509_04355 SM00858 AL509_04355 AL509_04395 SM00347 helix_turn_helix multiple antibiotic resistance protein AL509_04400 SM00382 ATPases associated with a variety of cellular activities AL509_04440 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL509_04560 SM00421 helix_turn_helix, Lux Regulon AL509_04565 SM00421 helix_turn_helix, Lux Regulon AL509_04635 SM00347 helix_turn_helix multiple antibiotic resistance protein AL509_04640 SM00382 ATPases associated with a variety of cellular activities AL509_04660 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL509_04660 SM00866 AL509_04660 AL509_04665 SM00882 Coenzyme A transferase AL509_04670 SM00882 Coenzyme A transferase AL509_04685 SM00346 helix_turn_helix isocitrate lyase regulation AL509_04705 SM00530 Helix-turn-helix XRE-family like proteins AL509_04765 SM00450 Rhodanese Homology Domain AL509_04770 SM00869 Autotransporter beta-domain AL509_04780 SM00387 Histidine kinase-like ATPases AL509_04780 SM00388 His Kinase A (phosphoacceptor) domain AL509_04780 SM00448 cheY-homologous receiver domain AL509_04785 SM00052 Putative diguanylate phosphodiesterase AL509_04785 SM00448 cheY-homologous receiver domain AL509_04790 SM00387 Histidine kinase-like ATPases AL509_04790 SM00388 His Kinase A (phosphoacceptor) domain AL509_04790 SM00448 cheY-homologous receiver domain AL509_04860 SM00478 endonuclease III AL509_04865 SM00840 AL509_04865 AL509_04870 SM00028 Tetratricopeptide repeats AL509_04890 SM01091 Transporter associated domain AL509_04900 SM00900 AL509_04900 AL509_04910 SM00710 Parallel beta-helix repeats AL509_04910 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses AL509_04915 SM00382 ATPases associated with a variety of cellular activities AL509_04955 SM00346 helix_turn_helix isocitrate lyase regulation AL509_05010 SM00382 ATPases associated with a variety of cellular activities AL509_05025 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL509_05025 SM00895 AL509_05025 AL509_05065 SM00829 Enoylreductase AL509_05120 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AL509_05120 SM00534 ATPase domain of DNA mismatch repair MUTS family AL509_05125 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. AL509_05135 SM01130 AL509_05135 AL509_05175 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AL509_05215 SM00470 ParB-like nuclease domain AL509_05220 SM00387 Histidine kinase-like ATPases AL509_05220 SM00388 His Kinase A (phosphoacceptor) domain AL509_05225 SM00448 cheY-homologous receiver domain AL509_05225 SM00862 Transcriptional regulatory protein, C terminal AL509_05250 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL509_05250 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL509_05260 SM00869 Autotransporter beta-domain AL509_05285 SM00448 cheY-homologous receiver domain AL509_05285 SM00862 Transcriptional regulatory protein, C terminal AL509_05295 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL509_05315 SM01101 AL509_05315 AL509_05340 SM00487 DEAD-like helicases superfamily AL509_05350 SM00155 Phospholipase D. Active site motifs. AL509_05360 SM00342 helix_turn_helix, arabinose operon control protein AL509_05400 SM00530 Helix-turn-helix XRE-family like proteins AL509_05405 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL509_05405 SM00895 AL509_05405 AL509_05420 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AL509_05440 SM00448 cheY-homologous receiver domain AL509_05440 SM00862 Transcriptional regulatory protein, C terminal AL509_05445 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL509_05445 SM00387 Histidine kinase-like ATPases AL509_05445 SM00388 His Kinase A (phosphoacceptor) domain AL509_05470 SM00382 ATPases associated with a variety of cellular activities AL509_05475 SM00382 ATPases associated with a variety of cellular activities AL509_05485 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AL509_05500 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL509_05545 SM00530 Helix-turn-helix XRE-family like proteins AL509_05565 SM00062 Bacterial periplasmic substrate-binding proteins AL509_05570 SM00382 ATPases associated with a variety of cellular activities AL509_05585 SM01130 AL509_05585 AL509_05590 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AL509_05685 SM00342 helix_turn_helix, arabinose operon control protein AL509_05710 SM01329 AL509_05710 AL509_05725 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AL509_05725 SM00465 GIY-YIG type nucleases (URI domain) AL509_05760 SM00862 Transcriptional regulatory protein, C terminal AL509_05780 SM00382 ATPases associated with a variety of cellular activities AL509_05830 SM00382 ATPases associated with a variety of cellular activities AL509_05870 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL509_05870 SM00895 AL509_05870 AL509_05925 SM00382 ATPases associated with a variety of cellular activities AL509_05945 SM00354 helix_turn _helix lactose operon repressor AL509_05955 SM00382 ATPases associated with a variety of cellular activities AL509_06000 SM00382 ATPases associated with a variety of cellular activities AL509_06020 SM00936 Penicillin-binding protein 5, C-terminal domain AL509_06025 SM00411 bacterial (prokaryotic) histone like domain AL509_06030 SM00347 helix_turn_helix multiple antibiotic resistance protein AL509_06120 SM01007 Class II Aldolase and Adducin N-terminal domain AL509_06195 SM00479 AL509_06195 AL509_06205 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AL509_06205 SM00091 PAS domain AL509_06205 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL509_06215 SM00342 helix_turn_helix, arabinose operon control protein AL509_06225 SM00382 ATPases associated with a variety of cellular activities AL509_06250 SM00116 Domain in cystathionine beta-synthase and other proteins. AL509_06295 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. AL509_06315 SM00342 helix_turn_helix, arabinose operon control protein AL509_06375 SM00382 ATPases associated with a variety of cellular activities AL509_06420 SM00382 ATPases associated with a variety of cellular activities AL509_06440 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL509_06440 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL509_06465 SM00382 ATPases associated with a variety of cellular activities AL509_06475 SM00855 Phosphoglycerate mutase family AL509_06480 SM00822 AL509_06480 AL509_06490 SM00851 MGS-like domain AL509_06490 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AL509_06495 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AL509_06510 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AL509_06510 SM00387 Histidine kinase-like ATPases AL509_06510 SM00388 His Kinase A (phosphoacceptor) domain AL509_06515 SM00448 cheY-homologous receiver domain AL509_06535 SM00382 ATPases associated with a variety of cellular activities AL509_06550 SM00493 AL509_06550 AL509_06615 SM00347 helix_turn_helix multiple antibiotic resistance protein AL509_06655 SM00829 Enoylreductase AL509_06725 SM00530 Helix-turn-helix XRE-family like proteins AL509_06760 SM00382 ATPases associated with a variety of cellular activities AL509_06765 SM00382 ATPases associated with a variety of cellular activities AL509_06775 SM00062 Bacterial periplasmic substrate-binding proteins AL509_06785 SM00882 Coenzyme A transferase AL509_06790 SM00882 Coenzyme A transferase AL509_06795 SM00346 helix_turn_helix isocitrate lyase regulation AL509_06810 SM01001 AIR carboxylase AL509_06855 SM00382 ATPases associated with a variety of cellular activities AL509_06860 SM00382 ATPases associated with a variety of cellular activities AL509_06885 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL509_06885 SM00866 AL509_06885 AL509_06900 SM00072 Guanylate kinase homologues. AL509_06940 SM00382 ATPases associated with a variety of cellular activities AL509_06950 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AL509_06960 SM00316 Ribosomal protein S1-like RNA-binding domain AL509_06980 SM00852 Probable molybdopterin binding domain AL509_07070 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AL509_07075 SM00861 Transketolase, pyrimidine binding domain AL509_07100 SM00919 Malic enzyme, NAD binding domain AL509_07100 SM01274 AL509_07100 AL509_07155 SM00382 ATPases associated with a variety of cellular activities AL509_07190 SM00903 Flavin reductase like domain AL509_07215 SM01323 AL509_07215 AL509_07235 SM00530 Helix-turn-helix XRE-family like proteins AL509_07245 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AL509_07250 SM00729 Elongator protein 3, MiaB family, Radical SAM AL509_07265 SM01091 Transporter associated domain AL509_07310 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AL509_07310 SM00091 PAS domain AL509_07310 SM00421 helix_turn_helix, Lux Regulon AL509_07315 SM00729 Elongator protein 3, MiaB family, Radical SAM AL509_07315 SM00876 Biotin and Thiamin Synthesis associated domain AL509_07365 SM00852 Probable molybdopterin binding domain AL509_07370 SM00852 Probable molybdopterin binding domain AL509_07395 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AL509_07400 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AL509_07400 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AL509_07460 SM00387 Histidine kinase-like ATPases AL509_07465 SM00448 cheY-homologous receiver domain AL509_07465 SM00862 Transcriptional regulatory protein, C terminal AL509_07545 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL509_07545 SM00895 AL509_07545 AL509_07550 SM00796 Allophanate hydrolase subunit 1 AL509_07550 SM00797 Allophanate hydrolase subunit 2 AL509_07550 SM00878 Biotin carboxylase C-terminal domain AL509_07570 SM00567 E-Z type HEAT repeats AL509_07585 SM00382 ATPases associated with a variety of cellular activities AL509_07610 SM00421 helix_turn_helix, Lux Regulon AL509_07610 SM00448 cheY-homologous receiver domain AL509_07615 SM00387 Histidine kinase-like ATPases AL509_07620 SM00014 Acid phosphatase homologues AL509_07640 SM00382 ATPases associated with a variety of cellular activities AL509_07660 SM00965 Secretin and TonB N terminus short domain AL509_07725 SM00344 helix_turn_helix ASNC type AL509_07740 SM00062 Bacterial periplasmic substrate-binding proteins AL509_07750 SM00382 ATPases associated with a variety of cellular activities AL509_07755 SM00257 Lysin motif AL509_07795 SM00387 Histidine kinase-like ATPases AL509_07800 SM00448 cheY-homologous receiver domain AL509_07865 SM00919 Malic enzyme, NAD binding domain AL509_07865 SM01274 AL509_07865 AL509_07890 SM00873 B3/4 domain AL509_07895 SM00347 helix_turn_helix multiple antibiotic resistance protein AL509_07920 SM00822 AL509_07920 AL509_07945 SM00530 Helix-turn-helix XRE-family like proteins AL509_07950 SM00155 Phospholipase D. Active site motifs. AL509_07970 SM00342 helix_turn_helix, arabinose operon control protein AL509_07985 SM00342 helix_turn_helix, arabinose operon control protein AL509_08005 SM00478 endonuclease III AL509_08020 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL509_08020 SM00895 AL509_08020 AL509_08040 SM00965 Secretin and TonB N terminus short domain AL509_08060 SM00052 Putative diguanylate phosphodiesterase AL509_08065 SM00244 prohibitin homologues AL509_08095 SM00342 helix_turn_helix, arabinose operon control protein AL509_08145 SM00965 Secretin and TonB N terminus short domain AL509_08180 SM00062 Bacterial periplasmic substrate-binding proteins AL509_08230 SM00342 helix_turn_helix, arabinose operon control protein AL509_08240 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AL509_08240 SM00450 Rhodanese Homology Domain AL509_08275 SM00421 helix_turn_helix, Lux Regulon AL509_08275 SM00448 cheY-homologous receiver domain AL509_08295 SM00347 helix_turn_helix multiple antibiotic resistance protein AL509_08305 SM01012 AL509_08305 AL509_08380 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AL509_08385 SM00342 helix_turn_helix, arabinose operon control protein AL509_08410 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL509_08410 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL509_08415 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AL509_08415 SM00267 diguanylate cyclase AL509_08420 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AL509_08440 SM00342 helix_turn_helix, arabinose operon control protein AL509_08455 SM00342 helix_turn_helix, arabinose operon control protein AL509_08465 SM01130 AL509_08465 AL509_08485 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AL509_08485 SM00450 Rhodanese Homology Domain AL509_08510 SM01007 Class II Aldolase and Adducin N-terminal domain AL509_08570 SM00382 ATPases associated with a variety of cellular activities AL509_08575 SM00382 ATPases associated with a variety of cellular activities AL509_08585 SM00487 DEAD-like helicases superfamily AL509_08585 SM00490 helicase superfamily c-terminal domain AL509_08615 SM00387 Histidine kinase-like ATPases AL509_08615 SM00388 His Kinase A (phosphoacceptor) domain AL509_08615 SM00448 cheY-homologous receiver domain AL509_08805 SM01130 AL509_08805 AL509_08815 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AL509_08840 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AL509_08840 SM00091 PAS domain AL509_08840 SM00421 helix_turn_helix, Lux Regulon AL509_08860 SM00248 ankyrin repeats AL509_08890 SM00965 Secretin and TonB N terminus short domain AL509_08905 SM00382 ATPases associated with a variety of cellular activities AL509_08935 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL509_08935 SM00895 AL509_08935 AL509_08940 SM00382 ATPases associated with a variety of cellular activities AL509_08950 SM00062 Bacterial periplasmic substrate-binding proteins AL509_08955 SM00829 Enoylreductase AL509_08985 SM00382 ATPases associated with a variety of cellular activities AL509_09015 SM00347 helix_turn_helix multiple antibiotic resistance protein AL509_09060 SM00382 ATPases associated with a variety of cellular activities AL509_09065 SM00382 ATPases associated with a variety of cellular activities AL509_09085 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AL509_09125 SM00346 helix_turn_helix isocitrate lyase regulation AL509_09135 SM00382 ATPases associated with a variety of cellular activities AL509_09180 SM00382 ATPases associated with a variety of cellular activities AL509_09180 SM00962 SRP54-type protein, GTPase domain AL509_09180 SM00963 SRP54-type protein, helical bundle domain AL509_09220 SM00347 helix_turn_helix multiple antibiotic resistance protein AL509_09230 SM00382 ATPases associated with a variety of cellular activities AL509_09260 SM01400 AL509_09260 AL509_09275 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL509_09275 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL509_09285 SM00028 Tetratricopeptide repeats AL509_09290 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AL509_09290 SM01232 AL509_09290 AL509_09295 SM00849 Metallo-beta-lactamase superfamily AL509_09325 SM00563 Phosphate acyltransferases AL509_09335 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL509_09335 SM00895 AL509_09335 AL509_09360 SM00014 Acid phosphatase homologues AL509_09365 SM00387 Histidine kinase-like ATPases AL509_09365 SM00388 His Kinase A (phosphoacceptor) domain AL509_09370 SM00448 cheY-homologous receiver domain AL509_09370 SM00862 Transcriptional regulatory protein, C terminal AL509_09445 SM00984 UDP binding domain AL509_09470 SM00052 Putative diguanylate phosphodiesterase AL509_09470 SM00267 diguanylate cyclase AL509_09480 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL509_09515 SM00382 ATPases associated with a variety of cellular activities AL509_09580 SM00267 diguanylate cyclase AL509_09620 SM00450 Rhodanese Homology Domain AL509_09640 SM00530 Helix-turn-helix XRE-family like proteins AL509_09645 SM00862 Transcriptional regulatory protein, C terminal AL509_09660 SM00530 Helix-turn-helix XRE-family like proteins AL509_09670 SM00052 Putative diguanylate phosphodiesterase AL509_09695 SM00382 ATPases associated with a variety of cellular activities AL509_09710 SM00822 AL509_09710 AL509_09740 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL509_09795 SM00849 Metallo-beta-lactamase superfamily AL509_09845 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL509_09845 SM00895 AL509_09845 AL509_09870 SM00965 Secretin and TonB N terminus short domain AL509_09880 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL509_09880 SM00387 Histidine kinase-like ATPases AL509_09880 SM00388 His Kinase A (phosphoacceptor) domain AL509_09885 SM00421 helix_turn_helix, Lux Regulon AL509_09905 SM00849 Metallo-beta-lactamase superfamily AL509_09945 SM00100 Cyclic nucleotide-monophosphate binding domain AL509_09945 SM00419 helix_turn_helix, cAMP Regulatory protein AL509_10060 SM00257 Lysin motif AL509_10065 SM00382 ATPases associated with a variety of cellular activities AL509_10065 SM00962 SRP54-type protein, GTPase domain AL509_10065 SM00963 SRP54-type protein, helical bundle domain AL509_10080 SM00644 AL509_10080 AL509_10125 SM00382 ATPases associated with a variety of cellular activities AL509_10155 SM00530 Helix-turn-helix XRE-family like proteins AL509_10170 SM00346 helix_turn_helix isocitrate lyase regulation AL509_10185 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AL509_10195 SM00382 ATPases associated with a variety of cellular activities AL509_10220 SM00387 Histidine kinase-like ATPases AL509_10245 SM00062 Bacterial periplasmic substrate-binding proteins AL509_10295 SM00232 JAB/MPN domain AL509_10375 SM00387 Histidine kinase-like ATPases AL509_10375 SM00388 His Kinase A (phosphoacceptor) domain AL509_10380 SM00421 helix_turn_helix, Lux Regulon AL509_10380 SM00448 cheY-homologous receiver domain AL509_10430 SM00530 Helix-turn-helix XRE-family like proteins AL509_10460 SM00382 ATPases associated with a variety of cellular activities AL509_10470 SM01130 AL509_10470 AL509_10475 SM00346 helix_turn_helix isocitrate lyase regulation AL509_10520 SM00858 AL509_10520 AL509_10525 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL509_10525 SM00895 AL509_10525 AL509_10530 SM00822 AL509_10530 AL509_10555 SM00382 ATPases associated with a variety of cellular activities AL509_10560 SM00382 ATPases associated with a variety of cellular activities AL509_10565 SM00822 AL509_10565 AL509_10570 SM00861 Transketolase, pyrimidine binding domain AL509_10600 SM00342 helix_turn_helix, arabinose operon control protein AL509_10625 SM00052 Putative diguanylate phosphodiesterase AL509_10655 SM00346 helix_turn_helix isocitrate lyase regulation AL509_10660 SM00882 Coenzyme A transferase AL509_10665 SM00882 Coenzyme A transferase AL509_10700 SM00947 Carbonic anhydrase AL509_10705 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL509_10705 SM00895 AL509_10705 AL509_10730 SM00382 ATPases associated with a variety of cellular activities AL509_10735 SM00382 ATPases associated with a variety of cellular activities AL509_10740 SM00822 AL509_10740 AL509_10745 SM00822 AL509_10745 AL509_10800 SM00346 helix_turn_helix isocitrate lyase regulation AL509_10855 SM00937 AL509_10855 AL509_10875 SM00344 helix_turn_helix ASNC type AL509_10920 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL509_10920 SM00895 AL509_10920 AL509_10945 SM01007 Class II Aldolase and Adducin N-terminal domain AL509_10965 SM00422 helix_turn_helix, mercury resistance AL509_10980 SM00829 Enoylreductase AL509_11035 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AL509_11040 SM00862 Transcriptional regulatory protein, C terminal AL509_11060 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL509_11060 SM00895 AL509_11060 AL509_11065 SM00267 diguanylate cyclase AL509_11075 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AL509_11075 SM00245 tail specific protease AL509_11085 SM00855 Phosphoglycerate mutase family AL509_11090 SM00450 Rhodanese Homology Domain AL509_11140 SM00448 cheY-homologous receiver domain AL509_11145 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL509_11145 SM00387 Histidine kinase-like ATPases AL509_11145 SM00388 His Kinase A (phosphoacceptor) domain AL509_11165 SM00729 Elongator protein 3, MiaB family, Radical SAM AL509_11200 SM01118 AL509_11200 AL509_11230 SM00062 Bacterial periplasmic substrate-binding proteins AL509_11250 SM00460 Transglutaminase/protease-like homologues AL509_11290 SM00382 ATPases associated with a variety of cellular activities AL509_11295 SM00382 ATPases associated with a variety of cellular activities AL509_11325 SM00116 Domain in cystathionine beta-synthase and other proteins. AL509_11340 SM00382 ATPases associated with a variety of cellular activities AL509_11360 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL509_11405 SM00749 bacterial OsmY and nodulation domain AL509_11480 SM00845 GatB domain AL509_11505 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AL509_11540 SM00382 ATPases associated with a variety of cellular activities AL509_11545 SM00382 ATPases associated with a variety of cellular activities AL509_11555 SM00347 helix_turn_helix multiple antibiotic resistance protein AL509_11560 SM00100 Cyclic nucleotide-monophosphate binding domain AL509_11570 SM00382 ATPases associated with a variety of cellular activities AL509_11610 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AL509_11615 SM00849 Metallo-beta-lactamase superfamily AL509_11655 SM00646 AL509_11655 AL509_11690 SM00912 haemagglutination activity domain AL509_11700 SM00986 Uracil DNA glycosylase superfamily AL509_11700 SM00987 UreE urease accessory protein, C-terminal domain AL509_11705 SM00487 DEAD-like helicases superfamily AL509_11705 SM00490 helicase superfamily c-terminal domain AL509_11740 SM00460 Transglutaminase/protease-like homologues AL509_11770 SM00996 S-adenosyl-L-homocysteine hydrolase AL509_11770 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AL509_11810 SM00344 helix_turn_helix ASNC type AL509_11875 SM00382 ATPases associated with a variety of cellular activities AL509_11885 SM00833 Cobalamin synthesis protein cobW C-terminal domain AL509_11900 SM00382 ATPases associated with a variety of cellular activities AL509_11900 SM01086 C-terminal, D2-small domain, of ClpB protein AL509_11920 SM00729 Elongator protein 3, MiaB family, Radical SAM AL509_11930 SM00671 Sel1-like repeats. AL509_11950 SM00936 Penicillin-binding protein 5, C-terminal domain AL509_11970 SM00382 ATPases associated with a variety of cellular activities AL509_12125 SM00155 Phospholipase D. Active site motifs. AL509_12145 SM00834 Putative regulatory protein AL509_12175 SM01130 AL509_12175 AL509_12180 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AL509_12210 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL509_12210 SM00895 AL509_12210 AL509_12270 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AL509_12290 SM01219 AL509_12290 AL509_12320 SM01004 Delta-aminolevulinic acid dehydratase AL509_12350 SM00662 RNA polymerases D AL509_12355 SM00363 S4 RNA-binding domain AL509_12355 SM01390 AL509_12355 AL509_12425 SM01374 AL509_12425 AL509_12440 SM00342 helix_turn_helix, arabinose operon control protein AL509_12455 SM00382 ATPases associated with a variety of cellular activities AL509_12460 SM00382 ATPases associated with a variety of cellular activities AL509_12495 SM00322 K homology RNA-binding domain AL509_12510 SM01382 AL509_12510 AL509_12510 SM01383 AL509_12510 AL509_12530 SM01403 AL509_12530 AL509_12540 SM00838 Elongation factor G C-terminus AL509_12540 SM00889 Elongation factor G, domain IV AL509_12555 SM00862 Transcriptional regulatory protein, C terminal AL509_12560 SM00448 cheY-homologous receiver domain AL509_12560 SM00862 Transcriptional regulatory protein, C terminal AL509_12565 SM00257 Lysin motif AL509_12570 SM00387 Histidine kinase-like ATPases AL509_12570 SM00388 His Kinase A (phosphoacceptor) domain AL509_12570 SM01080 AL509_12570 AL509_12585 SM00663 RNA polymerase I subunit A N-terminus AL509_12610 SM00649 Ribosomal protein L11/L12 AL509_12615 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AL509_12615 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AL509_12660 SM01230 AL509_12660 AL509_12675 SM00382 ATPases associated with a variety of cellular activities AL509_12685 SM00420 helix_turn_helix, Deoxyribose operon repressor AL509_12685 SM01134 AL509_12685 AL509_12695 SM00450 Rhodanese Homology Domain AL509_12715 SM00870 AL509_12715 AL509_12720 SM00470 ParB-like nuclease domain AL509_12740 SM01228 AL509_12740 AL509_12745 SM00357 Cold shock protein domain AL509_12775 SM00387 Histidine kinase-like ATPases AL509_12775 SM00388 His Kinase A (phosphoacceptor) domain AL509_12780 SM00448 cheY-homologous receiver domain AL509_12780 SM00862 Transcriptional regulatory protein, C terminal AL509_12815 SM00382 ATPases associated with a variety of cellular activities AL509_12820 SM00382 ATPases associated with a variety of cellular activities AL509_12845 SM01060 AL509_12845 AL509_12875 SM00480 DNA polymerase III beta subunit AL509_12880 SM00387 Histidine kinase-like ATPases AL509_12880 SM00433 TopoisomeraseII AL509_12935 SM00062 Bacterial periplasmic substrate-binding proteins AL509_12950 SM00382 ATPases associated with a variety of cellular activities AL509_12980 SM00346 helix_turn_helix isocitrate lyase regulation AL509_12985 SM00382 ATPases associated with a variety of cellular activities AL509_13025 SM00342 helix_turn_helix, arabinose operon control protein AL509_13025 SM00871 Bacterial transcription activator, effector binding domain AL509_13050 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL509_13050 SM00866 AL509_13050 AL509_13060 SM00382 ATPases associated with a variety of cellular activities AL509_13115 SM00382 ATPases associated with a variety of cellular activities AL509_13125 SM00450 Rhodanese Homology Domain AL509_13145 SM00903 Flavin reductase like domain AL509_13170 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain AL509_13180 SM00344 helix_turn_helix ASNC type AL509_13190 SM00822 AL509_13190 AL509_13200 SM00382 ATPases associated with a variety of cellular activities AL509_13210 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AL509_13210 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AL509_13210 SM00493 AL509_13210 AL509_13240 SM01119 AL509_13240 AL509_13250 SM00382 ATPases associated with a variety of cellular activities AL509_13265 SM00062 Bacterial periplasmic substrate-binding proteins AL509_13350 SM00342 helix_turn_helix, arabinose operon control protein AL509_13400 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL509_13400 SM00895 AL509_13400 AL509_13425 SM00919 Malic enzyme, NAD binding domain AL509_13425 SM01274 AL509_13425 AL509_13450 SM00965 Secretin and TonB N terminus short domain AL509_13480 SM00822 AL509_13480 AL509_13485 SM00881 CoA binding domain AL509_13505 SM00346 helix_turn_helix isocitrate lyase regulation AL509_13520 SM00342 helix_turn_helix, arabinose operon control protein AL509_13525 SM00878 Biotin carboxylase C-terminal domain AL509_13525 SM01209 AL509_13525 AL509_13565 SM00422 helix_turn_helix, mercury resistance AL509_13570 SM00849 Metallo-beta-lactamase superfamily AL509_13610 SM00836 DALR anticodon binding domain AL509_13610 SM01016 Arginyl tRNA synthetase N terminal dom AL509_13640 SM00382 ATPases associated with a variety of cellular activities AL509_13650 SM00354 helix_turn _helix lactose operon repressor AL509_13660 SM00917 LeuA allosteric (dimerisation) domain AL509_13715 SM00487 DEAD-like helicases superfamily AL509_13715 SM00490 helicase superfamily c-terminal domain AL509_13735 SM00382 ATPases associated with a variety of cellular activities AL509_13765 SM00342 helix_turn_helix, arabinose operon control protein AL509_13865 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AL509_13870 SM00530 Helix-turn-helix XRE-family like proteins AL509_13955 SM00382 ATPases associated with a variety of cellular activities AL509_13980 SM00382 ATPases associated with a variety of cellular activities AL509_14025 SM00878 Biotin carboxylase C-terminal domain AL509_14030 SM00796 Allophanate hydrolase subunit 1 AL509_14080 SM00100 Cyclic nucleotide-monophosphate binding domain AL509_14165 SM00984 UDP binding domain AL509_14175 SM00344 helix_turn_helix ASNC type AL509_14185 SM00829 Enoylreductase AL509_14205 SM00342 helix_turn_helix, arabinose operon control protein AL509_14230 SM00382 ATPases associated with a variety of cellular activities AL509_14360 SM00448 cheY-homologous receiver domain AL509_14360 SM00862 Transcriptional regulatory protein, C terminal AL509_14365 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL509_14365 SM00387 Histidine kinase-like ATPases AL509_14365 SM00388 His Kinase A (phosphoacceptor) domain AL509_14390 SM00829 Enoylreductase AL509_14400 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL509_14400 SM00866 AL509_14400 AL509_14430 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL509_14430 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL509_14440 SM00972 Spore Coat Protein U domain AL509_14455 SM00972 Spore Coat Protein U domain AL509_14490 SM01236 AL509_14490 AL509_14510 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL509_14510 SM00895 AL509_14510 AL509_14545 SM00382 ATPases associated with a variety of cellular activities AL509_14595 SM00062 Bacterial periplasmic substrate-binding proteins AL509_14615 SM00382 ATPases associated with a variety of cellular activities AL509_14630 SM00382 ATPases associated with a variety of cellular activities AL509_14675 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AL509_14725 SM00460 Transglutaminase/protease-like homologues AL509_14765 SM00382 ATPases associated with a variety of cellular activities AL509_14805 SM00925 MltA specific insert domain AL509_14830 SM00905 Dihydroneopterin aldolase AL509_14860 SM00382 ATPases associated with a variety of cellular activities AL509_14865 SM00382 ATPases associated with a variety of cellular activities AL509_14880 SM00327 von Willebrand factor (vWF) type A domain AL509_14890 SM01012 AL509_14890 AL509_14910 SM00882 Coenzyme A transferase AL509_14915 SM00882 Coenzyme A transferase AL509_14925 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AL509_14975 SM00382 ATPases associated with a variety of cellular activities AL509_14995 SM00487 DEAD-like helicases superfamily AL509_14995 SM00490 helicase superfamily c-terminal domain AL509_15005 SM00342 helix_turn_helix, arabinose operon control protein AL509_15025 SM00342 helix_turn_helix, arabinose operon control protein AL509_15045 SM00382 ATPases associated with a variety of cellular activities AL509_15050 SM00382 ATPases associated with a variety of cellular activities AL509_15180 SM00849 Metallo-beta-lactamase superfamily AL509_15220 SM00382 ATPases associated with a variety of cellular activities AL509_15225 SM00382 ATPases associated with a variety of cellular activities AL509_15235 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL509_15235 SM00895 AL509_15235 AL509_15280 SM00421 helix_turn_helix, Lux Regulon AL509_15315 SM00858 AL509_15315 AL509_15320 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL509_15320 SM00866 AL509_15320 AL509_15350 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL509_15350 SM00895 AL509_15350 AL509_15360 SM00797 Allophanate hydrolase subunit 2 AL509_15365 SM00796 Allophanate hydrolase subunit 1 AL509_15410 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL509_15410 SM00387 Histidine kinase-like ATPases AL509_15410 SM00388 His Kinase A (phosphoacceptor) domain AL509_15415 SM00448 cheY-homologous receiver domain AL509_15415 SM00862 Transcriptional regulatory protein, C terminal AL509_15420 SM00387 Histidine kinase-like ATPases AL509_15420 SM00388 His Kinase A (phosphoacceptor) domain AL509_15425 SM00448 cheY-homologous receiver domain AL509_15425 SM00862 Transcriptional regulatory protein, C terminal AL509_15435 SM00978 AL509_15435 AL509_15490 SM01018 B12 binding domain AL509_15495 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL509_15495 SM00895 AL509_15495 AL509_15510 SM00829 Enoylreductase AL509_15525 SM00382 ATPases associated with a variety of cellular activities AL509_15530 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AL509_15545 SM00530 Helix-turn-helix XRE-family like proteins AL509_15550 SM00478 endonuclease III AL509_15565 SM00342 helix_turn_helix, arabinose operon control protein AL509_15585 SM00062 Bacterial periplasmic substrate-binding proteins AL509_15600 SM00382 ATPases associated with a variety of cellular activities AL509_15620 SM00382 ATPases associated with a variety of cellular activities AL509_15625 SM00382 ATPases associated with a variety of cellular activities AL509_15660 SM00830 Chorismate mutase type II AL509_15790 SM00382 ATPases associated with a variety of cellular activities AL509_15820 SM00347 helix_turn_helix multiple antibiotic resistance protein AL509_15840 SM00382 ATPases associated with a variety of cellular activities AL509_15845 SM00382 ATPases associated with a variety of cellular activities AL509_15850 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL509_15850 SM00331 Sigma factor PP2C-like phosphatases AL509_15865 SM00267 diguanylate cyclase AL509_15870 SM00052 Putative diguanylate phosphodiesterase AL509_15870 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AL509_15870 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AL509_15870 SM00091 PAS domain AL509_15870 SM00267 diguanylate cyclase AL509_15910 SM00342 helix_turn_helix, arabinose operon control protein AL509_15980 SM00732 Likely ribonuclease with RNase H fold. AL509_15995 SM00563 Phosphate acyltransferases AL509_16015 SM00062 Bacterial periplasmic substrate-binding proteins AL509_16030 SM00382 ATPases associated with a variety of cellular activities AL509_16060 SM00382 ATPases associated with a variety of cellular activities AL509_16075 SM00387 Histidine kinase-like ATPases AL509_16075 SM00388 His Kinase A (phosphoacceptor) domain AL509_16080 SM00448 cheY-homologous receiver domain AL509_16080 SM00862 Transcriptional regulatory protein, C terminal AL509_16085 SM00955 AL509_16085 AL509_16115 SM00878 Biotin carboxylase C-terminal domain AL509_16190 SM00344 helix_turn_helix ASNC type AL509_16240 SM00382 ATPases associated with a variety of cellular activities AL509_16285 SM00382 ATPases associated with a variety of cellular activities AL509_16290 SM00382 ATPases associated with a variety of cellular activities AL509_16305 SM00859 Semialdehyde dehydrogenase, NAD binding domain AL509_16330 SM00363 S4 RNA-binding domain AL509_16355 SM00342 helix_turn_helix, arabinose operon control protein AL509_16380 SM00763 PrkA AAA domain AL509_16545 SM00382 ATPases associated with a variety of cellular activities AL509_16615 SM00331 Sigma factor PP2C-like phosphatases AL509_16615 SM01049 AL509_16615 AL509_16625 SM01005 Alanine racemase, C-terminal domain AL509_16670 SM00257 Lysin motif AL509_16675 SM00849 Metallo-beta-lactamase superfamily AL509_16700 SM00479 AL509_16700 AL509_16765 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL509_16765 SM00895 AL509_16765 AL509_16785 SM00382 ATPases associated with a variety of cellular activities AL509_16790 SM00382 ATPases associated with a variety of cellular activities AL509_16795 SM01130 AL509_16795 AL509_16830 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL509_16845 SM00838 Elongation factor G C-terminus AL509_16845 SM00889 Elongation factor G, domain IV AL509_16855 SM00344 helix_turn_helix ASNC type AL509_16870 SM00382 ATPases associated with a variety of cellular activities AL509_16925 SM00448 cheY-homologous receiver domain AL509_16925 SM00862 Transcriptional regulatory protein, C terminal AL509_16930 SM00387 Histidine kinase-like ATPases AL509_16930 SM00388 His Kinase A (phosphoacceptor) domain AL509_17025 SM00344 helix_turn_helix ASNC type AL509_17070 SM00151 SWI complex, BAF60b domains AL509_17085 SM00382 ATPases associated with a variety of cellular activities AL509_17145 SM01209 AL509_17145 AL509_17155 SM00842 Cell division protein FtsA AL509_17160 SM00864 Tubulin/FtsZ family, GTPase domain AL509_17160 SM00865 Tubulin/FtsZ family, C-terminal domain AL509_17180 SM00957 SecA DEAD-like domain AL509_17180 SM00958 SecA preprotein cross-linking domain AL509_17190 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL509_17190 SM00895 AL509_17190 AL509_17215 SM00344 helix_turn_helix ASNC type AL509_17230 SM00116 Domain in cystathionine beta-synthase and other proteins. AL509_17230 SM00924 MgtE intracellular N domain AL509_17275 SM00382 ATPases associated with a variety of cellular activities AL509_17275 SM00930 AL509_17275 AL509_17305 SM00965 Secretin and TonB N terminus short domain AL509_17320 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL509_17320 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL509_17340 SM00342 helix_turn_helix, arabinose operon control protein AL509_17370 SM00267 diguanylate cyclase AL509_17380 SM00822 AL509_17380 AL509_17415 SM00347 helix_turn_helix multiple antibiotic resistance protein AL509_17455 SM00650 Ribosomal RNA adenine dimethylases AL509_17500 SM00563 Phosphate acyltransferases AL509_17530 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AL509_17530 SM00091 PAS domain AL509_17530 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL509_17555 SM00822 AL509_17555 AL509_17670 SM00853 MutL C terminal dimerisation domain AL509_17670 SM01340 AL509_17670 AL509_17685 SM00646 AL509_17685 AL509_17780 SM00903 Flavin reductase like domain AL509_17805 SM00382 ATPases associated with a variety of cellular activities AL509_17825 SM00382 ATPases associated with a variety of cellular activities AL509_17885 SM00382 ATPases associated with a variety of cellular activities AL509_17890 SM00346 helix_turn_helix isocitrate lyase regulation AL509_17915 SM00382 ATPases associated with a variety of cellular activities AL509_17920 SM00382 ATPases associated with a variety of cellular activities AL509_17935 SM00822 AL509_17935 AL509_17985 SM00347 helix_turn_helix multiple antibiotic resistance protein AL509_18005 SM00382 ATPases associated with a variety of cellular activities AL509_18010 SM00382 ATPases associated with a variety of cellular activities AL509_18020 SM00342 helix_turn_helix, arabinose operon control protein AL509_18035 SM00382 ATPases associated with a variety of cellular activities AL509_18085 SM00341 Helicase and RNase D C-terminal AL509_18085 SM00487 DEAD-like helicases superfamily AL509_18085 SM00490 helicase superfamily c-terminal domain AL509_18085 SM00956 AL509_18085 AL509_18095 SM00448 cheY-homologous receiver domain AL509_18095 SM00862 Transcriptional regulatory protein, C terminal AL509_18100 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL509_18100 SM00387 Histidine kinase-like ATPases AL509_18105 SM00382 ATPases associated with a variety of cellular activities AL509_18120 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AL509_18130 SM00798 AICARFT/IMPCHase bienzyme AL509_18130 SM00851 MGS-like domain AL509_18155 SM01011 Aminopeptidase P, N-terminal domain AL509_18170 SM00831 Cation transporter/ATPase, N-terminus AL509_18245 SM00487 DEAD-like helicases superfamily AL509_18245 SM00490 helicase superfamily c-terminal domain AL509_18260 SM00852 Probable molybdopterin binding domain AL509_18265 SM00346 helix_turn_helix isocitrate lyase regulation AL509_18345 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL509_18425 SM00271 DnaJ molecular chaperone homology domain AL509_18460 SM00382 ATPases associated with a variety of cellular activities AL509_18480 SM01329 AL509_18480 AL509_18500 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL509_18500 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL509_18500 SM01049 AL509_18500 AL509_18505 SM01130 AL509_18505 AL509_18520 SM00448 cheY-homologous receiver domain AL509_18520 SM00862 Transcriptional regulatory protein, C terminal AL509_18525 SM00387 Histidine kinase-like ATPases AL509_18525 SM00388 His Kinase A (phosphoacceptor) domain AL509_18565 SM00463 Small MutS-related domain AL509_18575 SM00382 ATPases associated with a variety of cellular activities AL509_18575 SM00843 AL509_18575 AL509_18595 SM00382 ATPases associated with a variety of cellular activities AL509_18600 SM00382 ATPases associated with a variety of cellular activities AL509_18620 SM01119 AL509_18620 AL509_18630 SM00382 ATPases associated with a variety of cellular activities AL509_18660 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AL509_18665 SM01130 AL509_18665 AL509_18685 SM00382 ATPases associated with a variety of cellular activities AL509_18695 SM00382 ATPases associated with a variety of cellular activities AL509_18700 SM00382 ATPases associated with a variety of cellular activities AL509_18765 SM01387 AL509_18765 AL509_18770 SM00316 Ribosomal protein S1-like RNA-binding domain AL509_18770 SM00322 K homology RNA-binding domain AL509_18800 SM00342 helix_turn_helix, arabinose operon control protein AL509_18825 SM00829 Enoylreductase AL509_18925 SM00100 Cyclic nucleotide-monophosphate binding domain AL509_18925 SM00419 helix_turn_helix, cAMP Regulatory protein AL509_18940 SM00382 ATPases associated with a variety of cellular activities AL509_18965 SM00965 Secretin and TonB N terminus short domain AL509_18985 SM00387 Histidine kinase-like ATPases AL509_18985 SM00388 His Kinase A (phosphoacceptor) domain AL509_18990 SM00448 cheY-homologous receiver domain AL509_18990 SM00862 Transcriptional regulatory protein, C terminal AL509_19000 SM00822 AL509_19000 AL509_19005 SM00822 AL509_19005 AL509_19015 SM00448 cheY-homologous receiver domain AL509_19025 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AL509_19025 SM00091 PAS domain AL509_19025 SM00387 Histidine kinase-like ATPases AL509_19025 SM00388 His Kinase A (phosphoacceptor) domain AL509_19025 SM00448 cheY-homologous receiver domain AL509_19030 SM00387 Histidine kinase-like ATPases AL509_19030 SM00388 His Kinase A (phosphoacceptor) domain AL509_19035 SM00382 ATPases associated with a variety of cellular activities AL509_19060 SM00344 helix_turn_helix ASNC type AL509_19080 SM00382 ATPases associated with a variety of cellular activities AL509_19085 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL509_19085 SM00895 AL509_19085 AL509_19215 SM00014 Acid phosphatase homologues AL509_19265 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AL509_19270 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AL509_19330 SM00487 DEAD-like helicases superfamily AL509_19330 SM00490 helicase superfamily c-terminal domain AL509_19330 SM00982 AL509_19330 AL509_19330 SM01058 CarD-like/TRCF domain AL509_19345 SM00450 Rhodanese Homology Domain AL509_19360 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL509_19360 SM00387 Histidine kinase-like ATPases AL509_19360 SM00388 His Kinase A (phosphoacceptor) domain AL509_19365 SM00448 cheY-homologous receiver domain AL509_19365 SM00862 Transcriptional regulatory protein, C terminal AL509_19375 SM00986 Uracil DNA glycosylase superfamily AL509_19375 SM00987 UreE urease accessory protein, C-terminal domain AL509_19385 SM00968 SMC proteins Flexible Hinge Domain AL509_19390 SM00771 ZipA, C-terminal domain (FtsZ-binding) AL509_19395 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AL509_19395 SM00292 breast cancer carboxy-terminal domain AL509_19395 SM00532 Ligase N family AL509_19420 SM00382 ATPases associated with a variety of cellular activities AL509_19455 SM00382 ATPases associated with a variety of cellular activities AL509_19460 SM01022 AL509_19460 AL509_19495 SM00382 ATPases associated with a variety of cellular activities AL509_19500 SM00382 ATPases associated with a variety of cellular activities AL509_19505 SM00478 endonuclease III AL509_19505 SM00525 AL509_19505 AL509_19550 SM00954 Region found in RelA / SpoT proteins AL509_19585 SM00316 Ribosomal protein S1-like RNA-binding domain AL509_19590 SM00363 S4 RNA-binding domain AL509_19610 SM00644 AL509_19610 AL509_19645 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AL509_19650 SM00822 AL509_19650 AL509_19660 SM00825 Beta-ketoacyl synthase AL509_19685 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AL509_19690 SM00838 Elongation factor G C-terminus AL509_19700 SM00358 Double-stranded RNA binding motif AL509_19700 SM00535 Ribonuclease III family AL509_19830 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL509_19830 SM00895 AL509_19830 AL509_19860 SM00882 Coenzyme A transferase AL509_19865 SM00882 Coenzyme A transferase AL509_19885 SM00382 ATPases associated with a variety of cellular activities AL509_19935 SM01192 AL509_19935 AL509_19935 SM01193 AL509_19935 AL509_20015 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL509_20015 SM00866 AL509_20015 AL509_20060 SM00919 Malic enzyme, NAD binding domain AL509_20060 SM01274 AL509_20060 AL509_20065 SM00861 Transketolase, pyrimidine binding domain AL509_20095 SM00344 helix_turn_helix ASNC type AL509_20100 SM00861 Transketolase, pyrimidine binding domain AL509_20130 SM00965 Secretin and TonB N terminus short domain AL509_20165 SM00316 Ribosomal protein S1-like RNA-binding domain AL509_20165 SM00732 Likely ribonuclease with RNase H fold. AL509_20170 SM00491 AL509_20170 AL509_20180 SM00363 S4 RNA-binding domain AL509_20195 SM00822 AL509_20195 AL509_20265 SM00749 bacterial OsmY and nodulation domain AL509_20275 SM01209 AL509_20275 AL509_20285 SM00382 ATPases associated with a variety of cellular activities AL509_20410 SM00434 DNA Topoisomerase IV AL509_20445 SM00316 Ribosomal protein S1-like RNA-binding domain AL509_20450 SM00411 bacterial (prokaryotic) histone like domain AL509_20490 SM00346 helix_turn_helix isocitrate lyase regulation AL509_20510 SM00893 Electron transfer flavoprotein domain AL509_20515 SM00893 Electron transfer flavoprotein domain AL509_20560 SM00382 ATPases associated with a variety of cellular activities AL509_20580 SM00729 Elongator protein 3, MiaB family, Radical SAM AL509_20615 SM00479 AL509_20615 AL509_20725 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AL509_20730 SM00387 Histidine kinase-like ATPases AL509_20730 SM00388 His Kinase A (phosphoacceptor) domain AL509_20735 SM00448 cheY-homologous receiver domain AL509_20735 SM00862 Transcriptional regulatory protein, C terminal AL509_20750 SM00833 Cobalamin synthesis protein cobW C-terminal domain AL509_20755 SM00833 Cobalamin synthesis protein cobW C-terminal domain AL509_20775 SM00363 S4 RNA-binding domain AL509_20785 SM00316 Ribosomal protein S1-like RNA-binding domain AL509_20840 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AL509_20840 SM00474 3'-5' exonuclease AL509_20840 SM00475 5'-3' exonuclease AL509_20840 SM00479 AL509_20840 AL509_20840 SM00482 DNA polymerase A domain AL509_20875 SM00450 Rhodanese Homology Domain AL509_20890 SM00382 ATPases associated with a variety of cellular activities AL509_20930 SM00346 helix_turn_helix isocitrate lyase regulation AL509_20940 SM00861 Transketolase, pyrimidine binding domain AL509_20980 SM00382 ATPases associated with a variety of cellular activities AL509_21000 SM00344 helix_turn_helix ASNC type AL509_21025 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL509_21075 SM00267 diguanylate cyclase AL509_21095 SM00387 Histidine kinase-like ATPases AL509_21095 SM00388 His Kinase A (phosphoacceptor) domain AL509_21100 SM00448 cheY-homologous receiver domain AL509_21100 SM00862 Transcriptional regulatory protein, C terminal AL509_21105 SM00382 ATPases associated with a variety of cellular activities AL509_21140 SM00881 CoA binding domain AL509_21180 SM00346 helix_turn_helix isocitrate lyase regulation AL509_21200 SM00822 AL509_21200 AL509_21205 SM00382 ATPases associated with a variety of cellular activities AL509_21210 SM00382 ATPases associated with a variety of cellular activities AL509_21220 SM00886 Stress responsive A/B Barrel Domain AL509_21235 SM00670 Large family of predicted nucleotide-binding domains AL509_21325 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AL509_21325 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AL509_21525 SM00267 diguanylate cyclase AL509_21580 SM00479 AL509_21580 AL509_21590 SM00843 AL509_21590 AL509_21905 SM00155 Phospholipase D. Active site motifs. AL509_21940 SM01144 AL509_21940 AL509_21950 SM00316 Ribosomal protein S1-like RNA-binding domain AL509_21950 SM00357 Cold shock protein domain AL509_21950 SM00955 AL509_21950 AL509_21955 SM00967 RNA 2'-O ribose methyltransferase substrate binding AL509_21965 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AL509_21970 SM00411 bacterial (prokaryotic) histone like domain AL509_21995 SM00448 cheY-homologous receiver domain AL509_21995 SM00862 Transcriptional regulatory protein, C terminal AL509_22000 SM00387 Histidine kinase-like ATPases AL509_22000 SM00388 His Kinase A (phosphoacceptor) domain AL509_22100 SM00382 ATPases associated with a variety of cellular activities AL509_22170 SM00382 ATPases associated with a variety of cellular activities AL509_22170 SM00487 DEAD-like helicases superfamily AL509_22170 SM00490 helicase superfamily c-terminal domain AL509_22170 SM00847 Helicase associated domain (HA2) Add an annotation AL509_22180 SM00382 ATPases associated with a variety of cellular activities AL509_22190 SM00481 DNA polymerase alpha chain like domain AL509_22240 SM00382 ATPases associated with a variety of cellular activities AL509_22250 SM00267 diguanylate cyclase AL509_22260 SM00316 Ribosomal protein S1-like RNA-binding domain AL509_22290 SM00382 ATPases associated with a variety of cellular activities AL509_22290 SM00448 cheY-homologous receiver domain AL509_22295 SM00387 Histidine kinase-like ATPases AL509_22295 SM00388 His Kinase A (phosphoacceptor) domain AL509_22325 SM01209 AL509_22325 AL509_22325 SM01210 AL509_22325 AL509_22340 SM01329 AL509_22340 AL509_22365 SM00347 helix_turn_helix multiple antibiotic resistance protein AL509_22380 SM00829 Enoylreductase AL509_22420 SM00342 helix_turn_helix, arabinose operon control protein AL509_22440 SM00357 Cold shock protein domain AL509_22440 SM00382 ATPases associated with a variety of cellular activities AL509_22440 SM00959 Rho termination factor, N-terminal domain AL509_22450 SM00387 Histidine kinase-like ATPases AL509_22450 SM00433 TopoisomeraseII AL509_22460 SM00434 DNA Topoisomerase IV AL509_22485 SM00347 helix_turn_helix multiple antibiotic resistance protein AL509_22545 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AL509_22575 SM00530 Helix-turn-helix XRE-family like proteins AL509_22580 SM00062 Bacterial periplasmic substrate-binding proteins AL509_22580 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AL509_22590 SM00382 ATPases associated with a variety of cellular activities AL509_22605 SM00562 AL509_22605 AL509_22635 SM00564 beta-propeller repeat AL509_22640 SM00382 ATPases associated with a variety of cellular activities AL509_22660 SM00244 prohibitin homologues AL509_22665 SM00244 prohibitin homologues AL509_22675 SM00788 Adenylosuccinate synthetase AL509_22690 SM00400 zinc finger AL509_22690 SM00493 AL509_22690 AL509_22690 SM00766 DNA primase DnaG DnaB-binding AL509_22740 SM00858 AL509_22740 AL509_22750 SM00240 Forkhead associated domain AL509_22780 SM00116 Domain in cystathionine beta-synthase and other proteins. AL509_22800 SM00448 cheY-homologous receiver domain AL509_22800 SM00862 Transcriptional regulatory protein, C terminal AL509_22805 SM00387 Histidine kinase-like ATPases AL509_22805 SM00388 His Kinase A (phosphoacceptor) domain AL509_22810 SM00052 Putative diguanylate phosphodiesterase AL509_22810 SM00267 diguanylate cyclase AL509_22815 SM00052 Putative diguanylate phosphodiesterase AL509_22815 SM00267 diguanylate cyclase AL509_22830 SM00052 Putative diguanylate phosphodiesterase AL509_22830 SM00267 diguanylate cyclase AL509_22855 SM00421 helix_turn_helix, Lux Regulon AL509_22865 SM00382 ATPases associated with a variety of cellular activities AL509_22890 SM01329 AL509_22890 AL509_22895 SM00859 Semialdehyde dehydrogenase, NAD binding domain AL509_22900 SM00257 Lysin motif AL509_22980 SM00354 helix_turn _helix lactose operon repressor AL509_23000 SM00382 ATPases associated with a variety of cellular activities AL509_23035 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL509_23035 SM00895 AL509_23035 AL509_23050 SM00729 Elongator protein 3, MiaB family, Radical SAM AL509_23055 SM00421 helix_turn_helix, Lux Regulon AL509_23055 SM00448 cheY-homologous receiver domain AL509_23065 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AL509_23100 SM00938 Nitrogen regulatory protein P-II AL509_23135 SM00873 B3/4 domain AL509_23135 SM00874 tRNA synthetase B5 domain AL509_23135 SM00896 Ferredoxin-fold anticodon binding domain AL509_23140 SM00422 helix_turn_helix, mercury resistance AL509_23225 SM00344 helix_turn_helix ASNC type AL509_23275 SM00062 Bacterial periplasmic substrate-binding proteins AL509_23285 SM00382 ATPases associated with a variety of cellular activities AL509_23315 SM00382 ATPases associated with a variety of cellular activities AL509_23345 SM00342 helix_turn_helix, arabinose operon control protein AL509_23370 SM00028 Tetratricopeptide repeats AL509_23375 SM00267 diguanylate cyclase AL509_23405 SM00825 Beta-ketoacyl synthase AL509_23410 SM00822 AL509_23410 AL509_23420 SM00825 Beta-ketoacyl synthase AL509_23470 SM00563 Phosphate acyltransferases AL509_23580 SM00100 Cyclic nucleotide-monophosphate binding domain AL509_23590 SM00347 helix_turn_helix multiple antibiotic resistance protein AL509_23640 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL509_23680 SM00822 AL509_23680 AL509_23730 SM00903 Flavin reductase like domain AL509_23760 SM00342 helix_turn_helix, arabinose operon control protein AL509_23815 SM00986 Uracil DNA glycosylase superfamily AL509_23815 SM00987 UreE urease accessory protein, C-terminal domain AL509_23855 SM00382 ATPases associated with a variety of cellular activities AL509_23885 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AL509_23890 SM00028 Tetratricopeptide repeats AL509_23940 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AL509_23965 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL509_23965 SM00895 AL509_23965 AL509_23980 SM00052 Putative diguanylate phosphodiesterase AL509_23980 SM00091 PAS domain AL509_23980 SM00267 diguanylate cyclase AL509_24025 SM00822 AL509_24025 AL509_24045 SM00342 helix_turn_helix, arabinose operon control protein AL509_24075 SM01007 Class II Aldolase and Adducin N-terminal domain AL509_24095 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL509_24095 SM00866 AL509_24095 AL509_24135 SM00344 helix_turn_helix ASNC type AL509_24145 SM00382 ATPases associated with a variety of cellular activities AL509_24160 SM00346 helix_turn_helix isocitrate lyase regulation AL509_24175 SM00822 AL509_24175 AL509_24205 SM00382 ATPases associated with a variety of cellular activities AL509_24265 SM00354 helix_turn _helix lactose operon repressor AL509_24385 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL509_24385 SM00895 AL509_24385 AL509_24425 SM00422 helix_turn_helix, mercury resistance AL509_24450 SM00965 Secretin and TonB N terminus short domain AL509_24460 SM00861 Transketolase, pyrimidine binding domain AL509_24500 SM00938 Nitrogen regulatory protein P-II AL509_24515 SM00382 ATPases associated with a variety of cellular activities AL509_24620 SM00382 ATPases associated with a variety of cellular activities AL509_24625 SM01322 AL509_24625 AL509_24650 SM00363 S4 RNA-binding domain AL509_24700 SM00421 helix_turn_helix, Lux Regulon AL509_24700 SM00448 cheY-homologous receiver domain AL509_24705 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AL509_24705 SM00091 PAS domain AL509_24705 SM00387 Histidine kinase-like ATPases AL509_24705 SM00388 His Kinase A (phosphoacceptor) domain AL509_24780 SM00448 cheY-homologous receiver domain AL509_24785 SM00073 Histidine Phosphotransfer domain AL509_24785 SM00260 Two component signalling adaptor domain AL509_24785 SM00387 Histidine kinase-like ATPases AL509_24785 SM01231 AL509_24785 AL509_24790 SM00260 Two component signalling adaptor domain AL509_24795 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL509_24795 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL509_24800 SM00138 Methyltransferase, chemotaxis proteins AL509_24805 SM00448 cheY-homologous receiver domain AL509_24810 SM00448 cheY-homologous receiver domain AL509_24820 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL509_24835 SM00382 ATPases associated with a variety of cellular activities AL509_24835 SM00962 SRP54-type protein, GTPase domain AL509_24850 SM00858 AL509_24850 AL509_24895 SM00047 Lysozyme subfamily 2 AL509_24910 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL509_24910 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL509_24925 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL509_24925 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL509_24930 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AL509_24930 SM00091 PAS domain AL509_24930 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL509_24930 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL509_24980 SM00382 ATPases associated with a variety of cellular activities AL509_25105 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AL509_25150 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AL509_25160 SM00935 Outer membrane protein (OmpH-like) AL509_25230 SM00244 prohibitin homologues AL509_25235 SM00267 diguanylate cyclase AL509_25310 SM00248 ankyrin repeats AL509_25315 SM00346 helix_turn_helix isocitrate lyase regulation AL509_25320 SM00062 Bacterial periplasmic substrate-binding proteins AL509_25320 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AL509_25330 SM00382 ATPases associated with a variety of cellular activities AL509_25345 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AL509_25380 SM00344 helix_turn_helix ASNC type AL509_25425 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AL509_25425 SM00091 PAS domain AL509_25425 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL509_25425 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL509_25460 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AL509_25515 SM00382 ATPases associated with a variety of cellular activities AL509_25540 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AL509_25550 SM00420 helix_turn_helix, Deoxyribose operon repressor AL509_25550 SM01134 AL509_25550 AL509_25555 SM00382 ATPases associated with a variety of cellular activities AL509_25560 SM00382 ATPases associated with a variety of cellular activities AL509_25590 SM00862 Transcriptional regulatory protein, C terminal AL509_25615 SM00342 helix_turn_helix, arabinose operon control protein AL509_25690 SM00344 helix_turn_helix ASNC type AL509_25775 SM00382 ATPases associated with a variety of cellular activities AL509_25785 SM00382 ATPases associated with a variety of cellular activities AL509_25800 SM00062 Bacterial periplasmic substrate-binding proteins AL509_25835 SM01207 AL509_25835 AL509_25850 SM00257 Lysin motif AL509_25885 SM00422 helix_turn_helix, mercury resistance AL509_25940 SM00382 ATPases associated with a variety of cellular activities AL509_25955 SM00382 ATPases associated with a variety of cellular activities AL509_26040 SM00382 ATPases associated with a variety of cellular activities AL509_26045 SM00382 ATPases associated with a variety of cellular activities AL509_26090 SM00062 Bacterial periplasmic substrate-binding proteins AL509_26090 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AL509_26100 SM00382 ATPases associated with a variety of cellular activities AL509_26110 SM00342 helix_turn_helix, arabinose operon control protein AL509_26115 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AL509_26115 SM00954 Region found in RelA / SpoT proteins AL509_26120 SM01409 AL509_26120 AL509_26125 SM00072 Guanylate kinase homologues. AL509_26140 SM00822 AL509_26140 AL509_26200 SM00729 Elongator protein 3, MiaB family, Radical SAM AL509_26205 SM01230 AL509_26205 AL509_26210 SM00091 PAS domain AL509_26210 SM00387 Histidine kinase-like ATPases AL509_26210 SM00388 His Kinase A (phosphoacceptor) domain AL509_26215 SM00382 ATPases associated with a variety of cellular activities AL509_26215 SM00448 cheY-homologous receiver domain AL509_26245 SM00382 ATPases associated with a variety of cellular activities AL509_26290 SM00487 DEAD-like helicases superfamily AL509_26290 SM00490 helicase superfamily c-terminal domain AL509_26305 SM00984 UDP binding domain AL509_26345 SM00656 AL509_26345 AL509_26360 SM00448 cheY-homologous receiver domain AL509_26360 SM00862 Transcriptional regulatory protein, C terminal AL509_26365 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL509_26365 SM00387 Histidine kinase-like ATPases AL509_26365 SM00388 His Kinase A (phosphoacceptor) domain AL509_26380 SM00382 ATPases associated with a variety of cellular activities AL509_26425 SM00382 ATPases associated with a variety of cellular activities AL509_26430 SM00382 ATPases associated with a variety of cellular activities AL509_26490 SM00829 Enoylreductase AL509_26515 SM00091 PAS domain AL509_26515 SM00267 diguanylate cyclase AL509_26525 SM00344 helix_turn_helix ASNC type AL509_26545 SM00382 ATPases associated with a variety of cellular activities AL509_26555 SM00448 cheY-homologous receiver domain AL509_26555 SM00862 Transcriptional regulatory protein, C terminal AL509_26580 SM00052 Putative diguanylate phosphodiesterase AL509_26580 SM00448 cheY-homologous receiver domain AL509_26610 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AL509_26610 SM00091 PAS domain AL509_26610 SM00387 Histidine kinase-like ATPases AL509_26610 SM00388 His Kinase A (phosphoacceptor) domain AL509_26610 SM00448 cheY-homologous receiver domain AL509_26625 SM00382 ATPases associated with a variety of cellular activities AL509_26630 SM00382 ATPases associated with a variety of cellular activities AL509_26630 SM00448 cheY-homologous receiver domain AL509_26725 SM00267 diguanylate cyclase AL509_26730 SM00422 helix_turn_helix, mercury resistance AL509_26740 SM00267 diguanylate cyclase AL509_26765 SM00382 ATPases associated with a variety of cellular activities AL509_26775 SM00062 Bacterial periplasmic substrate-binding proteins AL509_26785 SM00671 Sel1-like repeats. AL509_26795 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AL509_26820 SM00363 S4 RNA-binding domain AL509_26845 SM00530 Helix-turn-helix XRE-family like proteins AL509_26855 SM00382 ATPases associated with a variety of cellular activities AL509_26860 SM00382 ATPases associated with a variety of cellular activities AL509_26900 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL509_26900 SM00895 AL509_26900 AL509_27045 SM00226 Low molecular weight phosphatase family AL509_27050 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AL509_27065 SM00867 YceI-like domain AL509_27110 SM00450 Rhodanese Homology Domain AL509_27125 SM00965 Secretin and TonB N terminus short domain AL509_27140 SM00382 ATPases associated with a variety of cellular activities AL509_27155 SM00062 Bacterial periplasmic substrate-binding proteins AL509_27180 SM00382 ATPases associated with a variety of cellular activities AL509_27240 SM00382 ATPases associated with a variety of cellular activities AL509_27270 SM00945 ProQ/FINO family AL509_27285 SM00858 AL509_27285 AL509_27305 SM00448 cheY-homologous receiver domain AL509_27305 SM00862 Transcriptional regulatory protein, C terminal AL509_27325 SM00382 ATPases associated with a variety of cellular activities AL509_27335 SM00862 Transcriptional regulatory protein, C terminal AL509_27355 SM00382 ATPases associated with a variety of cellular activities AL509_27365 SM01006 Siderophore biosynthesis protein domain AL509_27385 SM00342 helix_turn_helix, arabinose operon control protein AL509_27415 SM00382 ATPases associated with a variety of cellular activities AL509_27420 SM00382 ATPases associated with a variety of cellular activities AL509_27430 SM00062 Bacterial periplasmic substrate-binding proteins AL509_27430 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AL509_27470 SM00849 Metallo-beta-lactamase superfamily AL509_27475 SM00859 Semialdehyde dehydrogenase, NAD binding domain AL509_27485 SM00116 Domain in cystathionine beta-synthase and other proteins. AL509_27490 SM00347 helix_turn_helix multiple antibiotic resistance protein AL509_27495 SM00116 Domain in cystathionine beta-synthase and other proteins. AL509_27500 SM00387 Histidine kinase-like ATPases AL509_27500 SM00388 His Kinase A (phosphoacceptor) domain AL509_27505 SM00421 helix_turn_helix, Lux Regulon AL509_27505 SM00448 cheY-homologous receiver domain AL509_27535 SM00450 Rhodanese Homology Domain AL509_27540 SM00450 Rhodanese Homology Domain AL509_27565 SM00382 ATPases associated with a variety of cellular activities AL509_27585 SM00062 Bacterial periplasmic substrate-binding proteins AL509_27590 SM00062 Bacterial periplasmic substrate-binding proteins AL509_27670 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AL509_27680 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL509_27680 SM00895 AL509_27680 AL509_27685 SM01130 AL509_27685 AL509_27710 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL509_27710 SM00895 AL509_27710 AL509_27730 SM00382 ATPases associated with a variety of cellular activities AL509_27745 SM00342 helix_turn_helix, arabinose operon control protein AL509_27765 SM00062 Bacterial periplasmic substrate-binding proteins AL509_27790 SM00421 helix_turn_helix, Lux Regulon AL509_27790 SM00448 cheY-homologous receiver domain AL509_27795 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AL509_27795 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL509_27795 SM00387 Histidine kinase-like ATPases AL509_27805 SM00947 Carbonic anhydrase AL509_27810 SM00729 Elongator protein 3, MiaB family, Radical SAM AL509_27835 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AL509_27925 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL509_27960 SM00387 Histidine kinase-like ATPases AL509_27960 SM00388 His Kinase A (phosphoacceptor) domain AL509_27965 SM00448 cheY-homologous receiver domain AL509_27965 SM00862 Transcriptional regulatory protein, C terminal AL509_27995 SM00869 Autotransporter beta-domain AL509_28035 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL509_28055 SM00387 Histidine kinase-like ATPases AL509_28055 SM01049 AL509_28055 AL509_28060 SM00421 helix_turn_helix, Lux Regulon AL509_28060 SM00448 cheY-homologous receiver domain AL509_28080 SM00062 Bacterial periplasmic substrate-binding proteins AL509_28085 SM00382 ATPases associated with a variety of cellular activities AL509_28105 SM00965 Secretin and TonB N terminus short domain AL509_28125 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL509_28150 SM01007 Class II Aldolase and Adducin N-terminal domain AL509_28165 SM00833 Cobalamin synthesis protein cobW C-terminal domain AL509_28175 SM00382 ATPases associated with a variety of cellular activities AL509_28205 SM00346 helix_turn_helix isocitrate lyase regulation AL509_28210 SM00487 DEAD-like helicases superfamily AL509_28210 SM00490 helicase superfamily c-terminal domain AL509_28225 SM00347 helix_turn_helix multiple antibiotic resistance protein AL509_28270 SM00346 helix_turn_helix isocitrate lyase regulation AL509_28300 SM00481 DNA polymerase alpha chain like domain AL509_28310 SM00422 helix_turn_helix, mercury resistance AL509_28330 SM01400 AL509_28330 AL509_28365 SM00382 ATPases associated with a variety of cellular activities AL509_28380 SM00062 Bacterial periplasmic substrate-binding proteins AL509_28435 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL509_28435 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL509_28460 SM00464 Found in ATP-dependent protease La (LON) AL509_28480 SM01012 AL509_28480 AL509_28490 SM00382 ATPases associated with a variety of cellular activities AL509_28495 SM00382 ATPases associated with a variety of cellular activities AL509_28530 SM00342 helix_turn_helix, arabinose operon control protein AL509_28545 SM00912 haemagglutination activity domain AL509_28640 SM00965 Secretin and TonB N terminus short domain AL509_28665 SM00448 cheY-homologous receiver domain AL509_28665 SM00862 Transcriptional regulatory protein, C terminal AL509_28685 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AL509_28695 SM00357 Cold shock protein domain AL509_28700 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL509_28705 SM00823 Phosphopantetheine attachment site AL509_28705 SM01294 AL509_28705 AL509_28710 SM00822 AL509_28710 AL509_28710 SM00823 Phosphopantetheine attachment site AL509_28710 SM00825 Beta-ketoacyl synthase AL509_28710 SM00826 AL509_28710 AL509_28710 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AL509_28710 SM00829 Enoylreductase AL509_28715 SM00912 haemagglutination activity domain AL509_28720 SM00965 Secretin and TonB N terminus short domain AL509_28725 SM00965 Secretin and TonB N terminus short domain AL509_28745 SM00421 helix_turn_helix, Lux Regulon AL509_28815 SM00998 Adenylosuccinate lyase C-terminus AL509_28885 SM00965 Secretin and TonB N terminus short domain AL509_28910 SM01103 AL509_28910 AL509_28925 SM00271 DnaJ molecular chaperone homology domain AL509_28940 SM00014 Acid phosphatase homologues AL509_28950 SM00342 helix_turn_helix, arabinose operon control protein AL509_28950 SM00478 endonuclease III AL509_28950 SM01009 AlkA N-terminal domain AL509_28975 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AL509_28980 SM00965 Secretin and TonB N terminus short domain AL509_29005 SM00903 Flavin reductase like domain AL509_29050 SM00883 Chaperonin 10 Kd subunit AL509_29060 SM00869 Autotransporter beta-domain AL509_29065 SM00880 AL509_29065 AL509_29065 SM01118 AL509_29065 AL509_29120 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AL509_29165 SM00530 Helix-turn-helix XRE-family like proteins AL509_29180 SM00382 ATPases associated with a variety of cellular activities AL509_29255 SM01234 AL509_29255 AL509_29285 SM00421 helix_turn_helix, Lux Regulon AL509_29320 SM00382 ATPases associated with a variety of cellular activities AL509_29325 SM00421 helix_turn_helix, Lux Regulon AL509_29365 SM00869 Autotransporter beta-domain AL509_29435 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL509_29450 SM00346 helix_turn_helix isocitrate lyase regulation AL509_29455 SM00382 ATPases associated with a variety of cellular activities AL509_29485 SM00912 haemagglutination activity domain AL509_29510 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AL509_29550 SM00528 Domain in histone-like proteins of HNS family AL509_29605 SM00271 DnaJ molecular chaperone homology domain AL509_29655 SM00530 Helix-turn-helix XRE-family like proteins AL509_29735 SM00411 bacterial (prokaryotic) histone like domain AL509_29745 SM00382 ATPases associated with a variety of cellular activities AL509_29820 SM00342 helix_turn_helix, arabinose operon control protein AL509_29840 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL509_29840 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL509_29870 SM00245 tail specific protease AL509_29905 SM00382 ATPases associated with a variety of cellular activities AL509_29920 SM01130 AL509_29920 AL509_29970 SM00869 Autotransporter beta-domain AL509_29980 SM00869 Autotransporter beta-domain